Query 038973
Match_columns 341
No_of_seqs 332 out of 1462
Neff 11.8
Searched_HMMs 46136
Date Fri Mar 29 05:07:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038973.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038973hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 3.6E-37 7.8E-42 251.7 22.8 274 38-341 8-293 (294)
2 TIGR02240 PHA_depoly_arom poly 100.0 4.1E-36 9E-41 243.0 19.6 258 42-341 6-265 (276)
3 KOG4178 Soluble epoxide hydrol 100.0 4E-35 8.6E-40 227.0 23.5 283 37-341 21-319 (322)
4 PRK00870 haloalkane dehalogena 100.0 7E-35 1.5E-39 238.9 25.3 272 33-341 14-300 (302)
5 PRK03592 haloalkane dehalogena 100.0 1.5E-35 3.3E-40 242.3 20.4 271 39-341 8-288 (295)
6 PLN02385 hydrolase; alpha/beta 100.0 5.5E-35 1.2E-39 243.6 23.2 269 37-340 60-343 (349)
7 PLN02679 hydrolase, alpha/beta 100.0 4.6E-35 1E-39 244.2 21.2 274 42-341 65-356 (360)
8 PRK03204 haloalkane dehalogena 100.0 8.5E-35 1.8E-39 235.6 21.8 269 35-339 11-285 (286)
9 PLN02578 hydrolase 100.0 2.2E-34 4.8E-39 239.9 24.2 275 45-340 72-353 (354)
10 PLN02965 Probable pheophorbida 100.0 1.4E-34 3.1E-39 231.2 20.8 245 65-340 4-251 (255)
11 PLN03087 BODYGUARD 1 domain co 100.0 3.5E-34 7.6E-39 241.5 22.6 294 30-341 168-478 (481)
12 PRK10673 acyl-CoA esterase; Pr 100.0 4.7E-34 1E-38 229.1 21.6 251 50-341 2-254 (255)
13 TIGR03056 bchO_mg_che_rel puta 100.0 2E-33 4.4E-38 228.5 24.7 264 44-340 11-278 (278)
14 PRK10349 carboxylesterase BioH 100.0 3.1E-34 6.8E-39 229.8 19.4 252 50-341 3-255 (256)
15 PRK06489 hypothetical protein; 100.0 2E-33 4.3E-38 234.9 24.3 272 46-341 47-356 (360)
16 TIGR03343 biphenyl_bphD 2-hydr 100.0 3.3E-33 7.1E-38 227.5 24.2 257 48-340 19-281 (282)
17 PLN03084 alpha/beta hydrolase 100.0 3.3E-33 7.2E-38 231.4 24.1 271 41-341 107-383 (383)
18 PLN02298 hydrolase, alpha/beta 100.0 1.7E-33 3.8E-38 233.4 21.5 276 30-340 24-315 (330)
19 PHA02857 monoglyceride lipase; 100.0 9.7E-33 2.1E-37 223.7 22.7 258 42-340 4-271 (276)
20 PRK10749 lysophospholipase L2; 100.0 1.1E-32 2.3E-37 227.8 22.0 273 39-341 31-328 (330)
21 TIGR03611 RutD pyrimidine util 100.0 1.7E-32 3.6E-37 220.5 21.2 253 51-341 1-257 (257)
22 PRK07581 hypothetical protein; 100.0 7E-33 1.5E-37 230.5 17.9 279 47-341 24-335 (339)
23 TIGR02427 protocat_pcaD 3-oxoa 100.0 1.7E-32 3.6E-37 219.7 17.0 248 51-340 2-251 (251)
24 PRK08775 homoserine O-acetyltr 100.0 3.6E-32 7.9E-37 226.0 17.3 271 38-341 36-338 (343)
25 TIGR01392 homoserO_Ac_trn homo 100.0 4.1E-32 8.8E-37 226.5 15.5 285 47-340 14-351 (351)
26 PRK00175 metX homoserine O-ace 100.0 1.1E-31 2.4E-36 225.2 17.8 281 47-341 31-373 (379)
27 KOG1455 Lysophospholipase [Lip 100.0 7.6E-31 1.6E-35 200.0 20.5 271 34-340 23-310 (313)
28 TIGR01738 bioH putative pimelo 100.0 2.1E-31 4.6E-36 212.5 18.5 240 64-339 4-245 (245)
29 KOG1454 Predicted hydrolase/ac 100.0 6.7E-32 1.5E-36 218.8 15.5 283 37-341 24-323 (326)
30 PRK11126 2-succinyl-6-hydroxy- 100.0 2.1E-31 4.5E-36 211.9 17.9 237 64-341 2-241 (242)
31 COG2267 PldB Lysophospholipase 100.0 2E-30 4.4E-35 208.3 23.3 267 38-340 9-292 (298)
32 PLN02211 methyl indole-3-aceta 100.0 2.6E-30 5.7E-35 207.3 24.0 259 46-340 4-268 (273)
33 TIGR01250 pro_imino_pep_2 prol 100.0 1.8E-30 3.8E-35 212.3 22.1 264 46-340 9-288 (288)
34 PLN02652 hydrolase; alpha/beta 100.0 5.2E-30 1.1E-34 213.9 22.1 258 42-340 114-385 (395)
35 KOG4409 Predicted hydrolase/ac 100.0 1.4E-30 3E-35 202.4 15.3 129 36-168 63-196 (365)
36 TIGR01249 pro_imino_pep_1 prol 100.0 4.4E-30 9.5E-35 210.4 18.0 123 39-167 5-130 (306)
37 PF12697 Abhydrolase_6: Alpha/ 100.0 4.3E-30 9.2E-35 202.6 14.6 224 67-334 1-228 (228)
38 PLN02894 hydrolase, alpha/beta 100.0 6.7E-29 1.4E-33 209.1 22.2 273 42-340 83-383 (402)
39 TIGR03695 menH_SHCHC 2-succiny 100.0 5E-29 1.1E-33 199.4 20.5 244 65-340 2-251 (251)
40 KOG2984 Predicted hydrolase [G 100.0 5.8E-30 1.3E-34 182.1 12.8 247 38-341 21-275 (277)
41 PRK14875 acetoin dehydrogenase 100.0 7.9E-29 1.7E-33 209.6 21.3 256 42-341 113-370 (371)
42 TIGR01607 PST-A Plasmodium sub 100.0 1.6E-27 3.6E-32 196.1 21.6 262 43-340 2-331 (332)
43 PLN02511 hydrolase 100.0 1.7E-28 3.7E-33 205.9 15.9 275 37-340 70-363 (388)
44 PLN02980 2-oxoglutarate decarb 100.0 5.8E-28 1.3E-32 232.6 20.5 256 51-341 1360-1638(1655)
45 PRK05855 short chain dehydroge 100.0 1E-27 2.2E-32 214.9 19.4 272 42-340 6-290 (582)
46 KOG2382 Predicted alpha/beta h 100.0 5.3E-27 1.1E-31 182.3 18.5 265 50-341 37-312 (315)
47 PRK06765 homoserine O-acetyltr 100.0 9.1E-27 2E-31 193.6 18.7 282 47-341 39-387 (389)
48 COG1647 Esterase/lipase [Gener 99.9 4.8E-26 1E-30 165.2 17.5 218 65-341 16-243 (243)
49 PRK05077 frsA fermentation/res 99.9 1.6E-25 3.4E-30 188.7 21.5 237 38-340 168-410 (414)
50 PRK10985 putative hydrolase; P 99.9 1.4E-25 3E-30 184.9 19.6 270 39-340 32-318 (324)
51 PRK13604 luxD acyl transferase 99.9 6.5E-25 1.4E-29 172.8 20.8 225 39-327 10-248 (307)
52 PLN02872 triacylglycerol lipas 99.9 6.1E-24 1.3E-28 176.7 20.8 293 34-341 40-388 (395)
53 TIGR03100 hydr1_PEP hydrolase, 99.9 6.9E-24 1.5E-28 170.5 19.4 116 47-167 10-134 (274)
54 TIGR01838 PHA_synth_I poly(R)- 99.9 6E-23 1.3E-27 175.3 20.0 280 38-327 162-459 (532)
55 PF00561 Abhydrolase_1: alpha/ 99.9 8.3E-25 1.8E-29 172.8 7.4 218 93-336 1-229 (230)
56 PRK11071 esterase YqiA; Provis 99.9 1.4E-22 3E-27 152.9 18.5 185 65-340 2-189 (190)
57 TIGR01836 PHA_synth_III_C poly 99.9 1.1E-21 2.4E-26 163.7 21.5 266 63-341 61-349 (350)
58 KOG2564 Predicted acetyltransf 99.9 1.6E-23 3.4E-28 157.3 8.9 115 50-166 61-181 (343)
59 KOG4391 Predicted alpha/beta h 99.9 5.9E-22 1.3E-26 143.2 16.5 224 34-340 50-280 (300)
60 PRK10566 esterase; Provisional 99.9 1.5E-21 3.3E-26 155.7 19.5 100 63-164 26-139 (249)
61 KOG1552 Predicted alpha/beta h 99.9 4.1E-21 9E-26 144.2 17.2 211 37-339 34-249 (258)
62 PRK07868 acyl-CoA synthetase; 99.9 1.1E-20 2.4E-25 177.0 23.1 265 63-340 66-359 (994)
63 COG0596 MhpC Predicted hydrola 99.9 6.5E-20 1.4E-24 148.3 23.5 265 47-340 8-280 (282)
64 PF12695 Abhydrolase_5: Alpha/ 99.9 2.3E-21 5.1E-26 141.4 12.5 142 66-323 1-145 (145)
65 KOG4667 Predicted esterase [Li 99.9 4.7E-20 1E-24 133.3 16.0 217 64-338 33-254 (269)
66 COG2021 MET2 Homoserine acetyl 99.9 2.7E-19 5.9E-24 141.5 21.1 286 47-341 34-367 (368)
67 COG0429 Predicted hydrolase of 99.8 2.4E-19 5.2E-24 139.4 17.8 275 38-340 49-338 (345)
68 PRK11460 putative hydrolase; P 99.8 2.8E-19 6E-24 139.8 17.4 172 61-339 13-209 (232)
69 COG3208 GrsT Predicted thioest 99.8 6E-19 1.3E-23 131.8 17.3 219 62-339 5-233 (244)
70 TIGR03101 hydr2_PEP hydrolase, 99.8 1.4E-19 3.1E-24 142.3 13.4 123 42-167 4-134 (266)
71 TIGR02821 fghA_ester_D S-formy 99.8 5.3E-18 1.1E-22 136.5 22.3 120 47-167 23-173 (275)
72 COG1506 DAP2 Dipeptidyl aminop 99.8 2.5E-18 5.3E-23 152.9 18.2 230 36-340 363-614 (620)
73 KOG1838 Alpha/beta hydrolase [ 99.8 1.8E-17 4E-22 133.9 21.3 130 35-165 90-233 (409)
74 PF06342 DUF1057: Alpha/beta h 99.8 1.3E-17 2.7E-22 127.2 18.9 112 53-168 25-138 (297)
75 PLN02442 S-formylglutathione h 99.8 1E-17 2.2E-22 135.1 18.3 120 47-167 28-178 (283)
76 PF03096 Ndr: Ndr family; Int 99.8 2.3E-18 5E-23 133.1 12.4 262 41-340 2-277 (283)
77 KOG2931 Differentiation-relate 99.8 3E-17 6.4E-22 124.9 17.0 269 38-341 22-305 (326)
78 PLN00021 chlorophyllase 99.8 6.1E-17 1.3E-21 131.1 15.8 115 51-167 39-166 (313)
79 PF00326 Peptidase_S9: Prolyl 99.7 5E-17 1.1E-21 126.3 14.3 186 80-340 3-207 (213)
80 TIGR01840 esterase_phb esteras 99.7 1.1E-16 2.3E-21 124.0 15.7 105 63-167 12-130 (212)
81 PF06500 DUF1100: Alpha/beta h 99.7 1.1E-16 2.4E-21 130.5 11.8 129 38-168 165-297 (411)
82 TIGR01839 PHA_synth_II poly(R) 99.7 2.9E-15 6.3E-20 127.1 20.6 129 38-171 189-332 (560)
83 PRK10162 acetyl esterase; Prov 99.7 8E-15 1.7E-19 120.4 21.0 125 40-168 59-196 (318)
84 TIGR03230 lipo_lipase lipoprot 99.7 2.9E-16 6.2E-21 130.9 11.8 106 63-169 40-156 (442)
85 PF01738 DLH: Dienelactone hyd 99.7 8.4E-16 1.8E-20 119.8 13.7 175 62-341 12-216 (218)
86 PF06821 Ser_hydrolase: Serine 99.7 5.6E-16 1.2E-20 113.9 11.4 155 67-327 1-157 (171)
87 PF02230 Abhydrolase_2: Phosph 99.7 6.1E-16 1.3E-20 120.1 12.0 109 59-167 9-140 (216)
88 TIGR01849 PHB_depoly_PhaZ poly 99.7 6.2E-15 1.3E-19 121.6 16.6 266 64-341 102-405 (406)
89 COG2945 Predicted hydrolase of 99.7 2.2E-14 4.8E-19 102.6 16.7 172 61-339 25-204 (210)
90 TIGR00976 /NonD putative hydro 99.7 2.9E-14 6.3E-19 125.9 21.0 123 44-168 2-133 (550)
91 COG3458 Acetyl esterase (deace 99.6 1.6E-14 3.4E-19 108.9 15.1 216 40-326 58-303 (321)
92 PF05448 AXE1: Acetyl xylan es 99.6 1.4E-14 3.1E-19 117.5 16.0 230 40-340 58-318 (320)
93 cd00707 Pancreat_lipase_like P 99.6 8.7E-16 1.9E-20 122.8 8.7 117 47-168 23-148 (275)
94 PF12146 Hydrolase_4: Putative 99.6 1.2E-15 2.6E-20 96.3 6.4 77 48-126 1-79 (79)
95 COG0412 Dienelactone hydrolase 99.6 2.6E-13 5.7E-18 105.6 18.2 177 42-325 6-204 (236)
96 COG0400 Predicted esterase [Ge 99.6 5.2E-14 1.1E-18 105.8 13.2 104 62-167 16-134 (207)
97 PF00975 Thioesterase: Thioest 99.6 5.2E-14 1.1E-18 110.8 13.9 101 65-167 1-104 (229)
98 PF10230 DUF2305: Uncharacteri 99.6 4.8E-13 1E-17 106.4 19.0 106 64-169 2-124 (266)
99 PF05728 UPF0227: Uncharacteri 99.6 2.7E-13 5.8E-18 100.8 15.6 88 67-168 2-92 (187)
100 PRK10115 protease 2; Provision 99.6 4.5E-13 9.8E-18 120.3 19.4 130 37-168 415-560 (686)
101 KOG2565 Predicted hydrolases o 99.5 7.5E-14 1.6E-18 109.9 11.1 120 47-167 132-264 (469)
102 TIGR03502 lipase_Pla1_cef extr 99.5 3.1E-14 6.6E-19 126.2 9.8 110 42-152 421-575 (792)
103 KOG2624 Triglyceride lipase-ch 99.5 1.5E-12 3.3E-17 107.3 18.6 134 33-168 43-200 (403)
104 COG4757 Predicted alpha/beta h 99.5 2.5E-12 5.3E-17 94.9 15.8 256 41-339 8-280 (281)
105 COG3243 PhaC Poly(3-hydroxyalk 99.5 9.9E-13 2.1E-17 106.1 14.5 251 63-326 106-373 (445)
106 PF02273 Acyl_transf_2: Acyl t 99.5 1.6E-11 3.5E-16 91.6 19.0 228 41-327 5-241 (294)
107 PF07859 Abhydrolase_3: alpha/ 99.5 4.8E-12 1E-16 98.3 15.7 94 67-167 1-110 (211)
108 COG3571 Predicted hydrolase of 99.4 3E-11 6.6E-16 83.8 16.7 102 63-166 13-123 (213)
109 PF09752 DUF2048: Uncharacteri 99.4 2.8E-11 6E-16 96.6 18.2 240 62-341 90-348 (348)
110 PF08538 DUF1749: Protein of u 99.4 3E-12 6.5E-17 100.5 12.6 99 63-168 32-149 (303)
111 COG3545 Predicted esterase of 99.4 3.6E-11 7.9E-16 85.3 15.4 90 65-166 3-93 (181)
112 PF02129 Peptidase_S15: X-Pro 99.4 9.5E-12 2.1E-16 100.2 13.6 122 47-169 1-138 (272)
113 PRK10252 entF enterobactin syn 99.4 1.6E-11 3.5E-16 120.4 17.6 100 64-166 1068-1170(1296)
114 PF10503 Esterase_phd: Esteras 99.4 2.1E-11 4.5E-16 92.9 13.7 116 52-167 2-132 (220)
115 PRK05371 x-prolyl-dipeptidyl a 99.4 3E-11 6.5E-16 109.5 16.9 82 85-167 273-373 (767)
116 COG0657 Aes Esterase/lipase [L 99.4 4.6E-10 1E-14 92.6 22.4 116 47-168 60-192 (312)
117 PTZ00472 serine carboxypeptida 99.4 1.4E-11 3.1E-16 105.4 13.2 127 39-168 48-217 (462)
118 KOG2100 Dipeptidyl aminopeptid 99.4 7.3E-11 1.6E-15 106.6 17.9 223 38-340 498-745 (755)
119 PF06028 DUF915: Alpha/beta hy 99.3 5.5E-11 1.2E-15 92.8 14.3 105 63-168 10-144 (255)
120 PF12740 Chlorophyllase2: Chlo 99.3 1.1E-10 2.3E-15 90.2 13.5 102 63-166 16-130 (259)
121 PF03959 FSH1: Serine hydrolas 99.3 3.7E-11 7.9E-16 92.7 9.4 165 63-330 3-208 (212)
122 KOG1515 Arylacetamide deacetyl 99.2 3.8E-09 8.3E-14 85.7 20.7 126 40-168 63-208 (336)
123 KOG4627 Kynurenine formamidase 99.2 9.5E-11 2.1E-15 85.0 9.6 191 48-327 53-251 (270)
124 PF07819 PGAP1: PGAP1-like pro 99.2 8.2E-11 1.8E-15 91.0 9.1 103 63-167 3-123 (225)
125 KOG3043 Predicted hydrolase re 99.2 4.1E-10 8.8E-15 83.2 11.9 162 54-325 31-211 (242)
126 COG3319 Thioesterase domains o 99.2 2.3E-09 4.9E-14 83.5 16.4 100 65-167 1-103 (257)
127 PF03403 PAF-AH_p_II: Platelet 99.2 1.7E-10 3.7E-15 96.2 10.6 101 63-166 99-261 (379)
128 KOG2551 Phospholipase/carboxyh 99.2 2.8E-09 6E-14 78.9 15.4 59 280-339 160-221 (230)
129 COG4099 Predicted peptidase [G 99.2 1.8E-10 3.9E-15 88.5 9.2 116 46-166 169-303 (387)
130 PF08840 BAAT_C: BAAT / Acyl-C 99.2 7.7E-11 1.7E-15 90.7 6.4 51 117-168 5-57 (213)
131 KOG3975 Uncharacterized conser 99.1 1.4E-08 3E-13 76.3 17.3 106 62-167 27-147 (301)
132 KOG2281 Dipeptidyl aminopeptid 99.1 7.7E-09 1.7E-13 87.8 16.9 127 39-167 614-762 (867)
133 PF11339 DUF3141: Protein of u 99.1 4.4E-09 9.5E-14 87.6 14.7 77 92-172 100-180 (581)
134 PRK04940 hypothetical protein; 99.1 1.2E-08 2.6E-13 74.4 15.3 86 67-167 2-92 (180)
135 PF07224 Chlorophyllase: Chlor 99.1 1.1E-09 2.4E-14 82.9 10.2 103 63-167 45-157 (307)
136 COG4188 Predicted dienelactone 99.1 5.6E-10 1.2E-14 89.5 8.7 90 63-154 70-181 (365)
137 PF06057 VirJ: Bacterial virul 99.1 1.5E-09 3.3E-14 79.1 10.2 97 65-167 3-107 (192)
138 KOG2112 Lysophospholipase [Lip 99.0 3.4E-09 7.5E-14 77.8 10.6 102 64-166 3-127 (206)
139 COG4814 Uncharacterized protei 99.0 1.6E-07 3.5E-12 71.0 16.8 102 65-167 46-176 (288)
140 smart00824 PKS_TE Thioesterase 98.9 4E-08 8.7E-13 76.3 13.3 95 69-166 2-101 (212)
141 PLN02733 phosphatidylcholine-s 98.9 2.6E-09 5.6E-14 90.3 6.8 89 75-167 105-201 (440)
142 PF01674 Lipase_2: Lipase (cla 98.9 3.7E-09 8E-14 80.6 6.3 96 65-164 2-106 (219)
143 PF00151 Lipase: Lipase; Inte 98.9 1.6E-09 3.6E-14 88.5 4.3 104 62-169 69-189 (331)
144 PF05990 DUF900: Alpha/beta hy 98.9 1.6E-08 3.4E-13 78.9 8.6 104 63-167 17-137 (233)
145 PF12715 Abhydrolase_7: Abhydr 98.8 2E-08 4.4E-13 81.4 9.1 123 43-167 93-260 (390)
146 PF05677 DUF818: Chlamydia CHL 98.8 6.2E-08 1.3E-12 76.9 11.2 105 47-153 120-236 (365)
147 PF03583 LIP: Secretory lipase 98.8 2.9E-07 6.2E-12 74.5 15.1 45 282-326 218-267 (290)
148 COG3509 LpqC Poly(3-hydroxybut 98.8 6.5E-08 1.4E-12 75.1 10.3 127 40-167 37-179 (312)
149 PF00450 Peptidase_S10: Serine 98.8 8.9E-08 1.9E-12 82.6 12.4 130 39-168 12-182 (415)
150 COG2936 Predicted acyl esteras 98.8 2.3E-07 5E-12 79.5 14.0 129 39-168 20-160 (563)
151 KOG3847 Phospholipase A2 (plat 98.7 1.5E-07 3.2E-12 73.4 10.7 102 63-166 117-274 (399)
152 COG3150 Predicted esterase [Ge 98.7 5.2E-07 1.1E-11 63.7 11.9 90 67-167 2-91 (191)
153 KOG1553 Predicted alpha/beta h 98.7 1.2E-07 2.7E-12 74.8 9.7 121 42-167 218-345 (517)
154 KOG3101 Esterase D [General fu 98.7 9.8E-07 2.1E-11 64.8 12.5 120 48-168 25-177 (283)
155 COG1075 LipA Predicted acetylt 98.7 9.6E-08 2.1E-12 78.9 7.7 100 64-166 59-163 (336)
156 PRK10439 enterobactin/ferric e 98.6 1E-05 2.2E-10 68.7 18.0 119 48-167 191-323 (411)
157 PF12048 DUF3530: Protein of u 98.6 0.00016 3.4E-09 59.2 23.5 103 62-166 85-228 (310)
158 PF08386 Abhydrolase_4: TAP-li 98.5 4.3E-07 9.4E-12 61.0 6.9 59 282-340 33-92 (103)
159 PF04301 DUF452: Protein of un 98.5 2.8E-06 6E-11 64.2 11.8 80 64-167 11-90 (213)
160 PF05705 DUF829: Eukaryotic pr 98.5 3.2E-06 7E-11 66.9 12.9 58 282-339 177-240 (240)
161 PLN03016 sinapoylglucose-malat 98.5 1.2E-05 2.6E-10 68.6 17.0 131 38-168 37-211 (433)
162 PF05057 DUF676: Putative seri 98.5 6.4E-07 1.4E-11 69.4 7.9 87 63-151 3-97 (217)
163 PF10340 DUF2424: Protein of u 98.5 4.9E-05 1.1E-09 62.6 18.7 106 63-169 121-237 (374)
164 PLN02209 serine carboxypeptida 98.5 2.8E-05 6E-10 66.5 18.1 130 39-168 40-213 (437)
165 PF05577 Peptidase_S28: Serine 98.5 1.2E-06 2.7E-11 75.7 10.1 104 64-168 29-149 (434)
166 KOG1282 Serine carboxypeptidas 98.4 0.00013 2.7E-09 62.1 20.1 132 37-169 43-215 (454)
167 KOG3253 Predicted alpha/beta h 98.4 9.4E-06 2E-10 69.2 12.3 44 282-325 303-347 (784)
168 KOG4840 Predicted hydrolases o 98.4 7.4E-05 1.6E-09 55.7 15.2 101 64-167 36-144 (299)
169 PF00756 Esterase: Putative es 98.3 8.3E-07 1.8E-11 71.0 5.5 120 48-167 5-150 (251)
170 KOG3724 Negative regulator of 98.3 5.6E-06 1.2E-10 72.8 10.0 125 40-166 59-219 (973)
171 COG4782 Uncharacterized protei 98.3 4.1E-06 8.8E-11 67.3 8.2 106 62-168 114-235 (377)
172 KOG1551 Uncharacterized conser 98.3 3.7E-05 7.9E-10 58.9 12.5 54 286-340 309-364 (371)
173 cd00312 Esterase_lipase Estera 98.2 5.6E-06 1.2E-10 73.1 9.1 105 62-168 93-214 (493)
174 COG1505 Serine proteases of th 98.2 6.1E-05 1.3E-09 64.6 13.1 137 31-168 387-536 (648)
175 PF11144 DUF2920: Protein of u 98.2 0.00024 5.3E-09 58.8 16.0 120 48-167 19-219 (403)
176 PF02450 LCAT: Lecithin:choles 98.1 2.3E-05 5E-10 66.4 10.2 112 42-167 33-160 (389)
177 KOG2183 Prolylcarboxypeptidase 98.1 2.3E-05 5.1E-10 63.9 9.3 104 65-168 81-203 (492)
178 COG1073 Hydrolases of the alph 98.1 2.9E-06 6.2E-11 69.7 3.7 57 284-340 233-295 (299)
179 PLN02606 palmitoyl-protein thi 98.0 6.8E-05 1.5E-09 59.6 9.6 99 65-166 27-131 (306)
180 PF05576 Peptidase_S37: PS-10 98.0 0.00062 1.3E-08 56.2 14.7 102 63-167 62-169 (448)
181 COG2272 PnbA Carboxylesterase 97.9 5.3E-05 1.1E-09 63.8 8.3 118 51-168 80-218 (491)
182 PF02089 Palm_thioest: Palmito 97.9 1.8E-05 3.8E-10 62.3 4.2 103 63-166 4-115 (279)
183 COG0627 Predicted esterase [Ge 97.9 0.0001 2.2E-09 60.0 8.5 107 62-168 52-188 (316)
184 PF10142 PhoPQ_related: PhoPQ- 97.8 0.00014 3E-09 60.2 9.1 58 280-339 259-317 (367)
185 PLN02633 palmitoyl protein thi 97.8 0.00024 5.2E-09 56.6 9.8 98 65-166 26-130 (314)
186 KOG2182 Hydrolytic enzymes of 97.8 0.00022 4.8E-09 60.0 9.8 107 62-168 84-208 (514)
187 COG2382 Fes Enterochelin ester 97.8 0.0009 1.9E-08 53.0 12.5 120 47-167 81-212 (299)
188 COG4553 DepA Poly-beta-hydroxy 97.7 0.0014 3.1E-08 51.3 12.5 103 62-168 101-210 (415)
189 KOG2541 Palmitoyl protein thio 97.7 0.00017 3.7E-09 55.6 7.4 98 65-166 24-127 (296)
190 PF00135 COesterase: Carboxyle 97.7 0.00024 5.1E-09 63.7 9.7 123 45-167 105-245 (535)
191 KOG3967 Uncharacterized conser 97.6 0.00063 1.4E-08 50.5 8.6 103 63-167 100-227 (297)
192 PF06259 Abhydrolase_8: Alpha/ 97.5 0.0023 5.1E-08 47.3 10.9 115 52-167 8-144 (177)
193 PF04083 Abhydro_lipase: Parti 97.5 0.00012 2.6E-09 43.6 3.4 47 35-81 9-60 (63)
194 KOG2237 Predicted serine prote 97.5 0.002 4.4E-08 56.1 11.8 127 40-168 443-585 (712)
195 COG1770 PtrB Protease II [Amin 97.4 0.015 3.3E-07 51.2 15.4 125 43-168 424-563 (682)
196 COG2819 Predicted hydrolase of 97.3 0.0052 1.1E-07 48.1 11.0 36 132-167 137-172 (264)
197 cd00741 Lipase Lipase. Lipase 97.3 0.00052 1.1E-08 50.1 4.9 52 116-167 9-67 (153)
198 PF07082 DUF1350: Protein of u 97.2 0.062 1.3E-06 41.8 15.6 94 63-165 16-123 (250)
199 KOG2369 Lecithin:cholesterol a 97.1 0.0005 1.1E-08 57.7 3.5 87 79-167 125-225 (473)
200 PLN02517 phosphatidylcholine-s 97.1 0.0009 2E-08 58.2 5.0 84 79-167 157-263 (642)
201 PF01764 Lipase_3: Lipase (cla 97.1 0.00084 1.8E-08 48.2 4.2 37 116-153 49-85 (140)
202 COG2939 Carboxypeptidase C (ca 97.0 0.0039 8.4E-08 53.1 7.8 116 51-168 88-237 (498)
203 PF06441 EHN: Epoxide hydrolas 96.7 0.0023 5.1E-08 43.3 3.7 40 43-83 72-111 (112)
204 PF11187 DUF2974: Protein of u 96.7 0.0037 8.1E-08 48.5 5.2 46 120-167 74-123 (224)
205 PF11288 DUF3089: Protein of u 96.7 0.003 6.4E-08 47.8 4.5 41 113-153 76-116 (207)
206 PF01083 Cutinase: Cutinase; 96.6 0.017 3.6E-07 43.3 7.8 100 65-167 6-122 (179)
207 COG4287 PqaA PhoPQ-activated p 96.5 0.0073 1.6E-07 49.1 5.5 59 280-340 326-385 (507)
208 cd00519 Lipase_3 Lipase (class 96.3 0.0053 1.1E-07 48.3 4.0 22 132-153 128-149 (229)
209 KOG1202 Animal-type fatty acid 96.3 0.12 2.7E-06 49.1 12.6 96 62-168 2121-2220(2376)
210 KOG1516 Carboxylesterase and r 96.3 0.018 3.9E-07 51.9 7.6 106 64-169 112-234 (545)
211 COG2830 Uncharacterized protei 96.2 0.011 2.5E-07 41.9 4.8 78 65-167 12-90 (214)
212 COG3946 VirJ Type IV secretory 96.2 0.01 2.3E-07 49.0 5.3 94 65-164 261-362 (456)
213 KOG2521 Uncharacterized conser 96.1 0.3 6.5E-06 40.5 13.1 55 286-340 228-288 (350)
214 PLN02162 triacylglycerol lipas 96.1 0.012 2.5E-07 50.1 5.0 34 117-151 264-297 (475)
215 PLN00413 triacylglycerol lipas 95.9 0.016 3.5E-07 49.4 5.3 35 116-151 269-303 (479)
216 PLN02571 triacylglycerol lipas 95.7 0.013 2.7E-07 49.4 3.9 37 116-152 209-246 (413)
217 PLN02454 triacylglycerol lipas 95.6 0.016 3.4E-07 48.8 4.0 20 133-152 229-248 (414)
218 PLN02213 sinapoylglucose-malat 95.4 0.061 1.3E-06 44.6 6.9 59 283-341 233-316 (319)
219 PF05277 DUF726: Protein of un 95.2 0.05 1.1E-06 45.0 5.7 36 132-167 220-260 (345)
220 PLN02408 phospholipase A1 95.2 0.027 5.8E-07 46.8 4.0 35 118-152 185-220 (365)
221 PLN02310 triacylglycerol lipas 95.2 0.026 5.5E-07 47.5 3.9 36 117-152 191-229 (405)
222 PLN02934 triacylglycerol lipas 94.9 0.034 7.5E-07 47.9 4.1 34 117-151 307-340 (515)
223 COG4947 Uncharacterized protei 94.8 0.03 6.5E-07 40.4 2.9 114 48-168 14-137 (227)
224 KOG4372 Predicted alpha/beta h 94.7 0.045 9.7E-07 45.5 4.1 82 63-148 79-166 (405)
225 PLN03037 lipase class 3 family 94.6 0.043 9.3E-07 47.4 3.8 36 117-152 300-338 (525)
226 PLN02324 triacylglycerol lipas 94.4 0.049 1.1E-06 45.9 3.8 35 118-152 200-235 (415)
227 KOG1283 Serine carboxypeptidas 94.4 0.64 1.4E-05 37.6 9.5 125 41-168 6-167 (414)
228 PLN02802 triacylglycerol lipas 94.3 0.059 1.3E-06 46.5 4.0 35 118-152 315-350 (509)
229 PLN02753 triacylglycerol lipas 94.2 0.059 1.3E-06 46.7 3.8 34 118-151 294-331 (531)
230 PF06850 PHB_depo_C: PHB de-po 94.1 0.12 2.5E-06 38.6 4.6 56 285-340 136-200 (202)
231 KOG4388 Hormone-sensitive lipa 94.0 0.18 4E-06 44.0 6.4 113 53-167 385-508 (880)
232 PLN02761 lipase class 3 family 94.0 0.063 1.4E-06 46.5 3.7 35 117-151 274-313 (527)
233 PF07519 Tannase: Tannase and 93.8 1.1 2.4E-05 39.5 11.0 114 50-169 16-152 (474)
234 PLN02719 triacylglycerol lipas 93.6 0.087 1.9E-06 45.6 3.7 35 118-152 280-318 (518)
235 PLN02213 sinapoylglucose-malat 93.1 0.51 1.1E-05 39.2 7.5 75 94-168 3-97 (319)
236 TIGR01626 ytfJ_HI0045 conserve 92.7 3.3 7.1E-05 31.1 10.7 98 41-150 38-142 (184)
237 KOG4569 Predicted lipase [Lipi 92.7 0.14 3.1E-06 42.7 3.7 37 115-152 155-191 (336)
238 PLN02847 triacylglycerol lipas 92.3 0.19 4.2E-06 44.3 4.0 21 132-152 251-271 (633)
239 PF08237 PE-PPE: PE-PPE domain 91.3 0.76 1.6E-05 35.9 6.1 40 113-152 28-68 (225)
240 TIGR03712 acc_sec_asp2 accesso 90.9 10 0.00023 33.1 16.2 113 47-167 274-390 (511)
241 COG5153 CVT17 Putative lipase 89.1 0.63 1.4E-05 36.9 3.9 34 120-153 264-297 (425)
242 KOG4540 Putative lipase essent 89.1 0.63 1.4E-05 36.9 3.9 34 120-153 264-297 (425)
243 PF09994 DUF2235: Uncharacteri 89.1 4.9 0.00011 32.7 9.2 88 65-152 2-112 (277)
244 KOG2029 Uncharacterized conser 85.9 1.3 2.8E-05 39.2 4.3 49 118-166 510-571 (697)
245 PF07519 Tannase: Tannase and 84.2 1.7 3.8E-05 38.3 4.5 58 284-341 354-426 (474)
246 COG4822 CbiK Cobalamin biosynt 83.2 8.4 0.00018 29.4 6.9 66 59-137 133-199 (265)
247 KOG2385 Uncharacterized conser 80.7 3.7 8.1E-05 35.8 4.9 39 129-168 445-488 (633)
248 KOG4389 Acetylcholinesterase/B 78.0 7.5 0.00016 33.9 5.9 118 52-171 122-259 (601)
249 PRK12467 peptide synthase; Pro 77.1 9.7 0.00021 43.6 8.0 97 65-164 3693-3792(3956)
250 PRK14581 hmsF outer membrane N 74.6 36 0.00078 31.7 9.6 75 65-140 49-143 (672)
251 PF09949 DUF2183: Uncharacteri 74.4 23 0.00049 23.6 7.1 80 82-162 14-97 (100)
252 COG3673 Uncharacterized conser 70.6 57 0.0012 27.1 8.7 98 63-164 30-150 (423)
253 smart00827 PKS_AT Acyl transfe 69.7 5.2 0.00011 32.9 3.2 30 121-151 72-101 (298)
254 PF00698 Acyl_transf_1: Acyl t 69.2 3.5 7.5E-05 34.4 2.1 30 121-151 74-103 (318)
255 PRK02399 hypothetical protein; 68.6 60 0.0013 28.0 9.0 95 68-163 6-128 (406)
256 TIGR03131 malonate_mdcH malona 65.9 6.6 0.00014 32.3 3.1 30 121-151 66-95 (295)
257 PRK14582 pgaB outer membrane N 65.4 68 0.0015 30.0 9.4 61 77-138 71-141 (671)
258 PF08139 LPAM_1: Prokaryotic m 64.3 7.3 0.00016 18.2 1.7 13 1-13 6-18 (25)
259 PF06792 UPF0261: Uncharacteri 62.9 85 0.0018 27.2 8.8 96 66-163 3-126 (403)
260 cd07225 Pat_PNPLA6_PNPLA7 Pata 62.8 10 0.00022 31.4 3.5 32 121-153 33-64 (306)
261 cd01714 ETF_beta The electron 62.5 28 0.0006 26.8 5.7 65 91-163 75-145 (202)
262 COG3933 Transcriptional antite 61.3 45 0.00098 29.0 6.9 72 65-148 110-181 (470)
263 COG1073 Hydrolases of the alph 61.2 86 0.0019 25.3 9.3 88 63-154 48-154 (299)
264 TIGR00128 fabD malonyl CoA-acy 61.0 9 0.00019 31.3 3.0 30 122-152 73-103 (290)
265 cd07198 Patatin Patatin-like p 60.8 12 0.00025 27.9 3.3 33 121-154 16-48 (172)
266 PRK13728 conjugal transfer pro 60.5 30 0.00064 26.1 5.3 58 39-104 54-111 (181)
267 PRK10279 hypothetical protein; 60.3 11 0.00023 31.1 3.3 33 121-154 23-55 (300)
268 PLN02748 tRNA dimethylallyltra 59.6 51 0.0011 29.3 7.3 77 62-140 19-120 (468)
269 cd07227 Pat_Fungal_NTE1 Fungal 57.8 14 0.0003 29.9 3.5 32 121-153 28-59 (269)
270 COG1448 TyrB Aspartate/tyrosin 56.9 61 0.0013 27.6 6.9 87 64-166 171-264 (396)
271 cd07207 Pat_ExoU_VipD_like Exo 56.7 14 0.00031 28.0 3.3 30 123-153 19-48 (194)
272 cd07210 Pat_hypo_W_succinogene 56.5 16 0.00035 28.6 3.5 30 123-153 20-49 (221)
273 PF10605 3HBOH: 3HB-oligomer h 56.2 8.4 0.00018 34.6 2.1 36 134-169 287-323 (690)
274 COG1752 RssA Predicted esteras 55.3 14 0.0003 30.6 3.2 32 121-153 29-60 (306)
275 TIGR01361 DAHP_synth_Bsub phos 54.1 1.2E+02 0.0025 24.6 8.7 74 63-142 131-206 (260)
276 PRK09810 entericidin A; Provis 53.6 21 0.00046 19.1 2.6 14 1-14 1-14 (41)
277 PF06309 Torsin: Torsin; Inte 53.0 19 0.00041 25.2 3.0 20 62-81 50-69 (127)
278 cd07230 Pat_TGL4-5_like Triacy 51.4 9.7 0.00021 33.1 1.7 36 123-159 93-128 (421)
279 PF00448 SRP54: SRP54-type pro 50.5 85 0.0018 24.0 6.5 64 92-163 83-148 (196)
280 PRK05579 bifunctional phosphop 50.2 1.7E+02 0.0038 25.4 9.0 73 64-139 116-196 (399)
281 cd07228 Pat_NTE_like_bacteria 49.3 23 0.00049 26.4 3.3 30 124-154 21-50 (175)
282 cd07209 Pat_hypo_Ecoli_Z1214_l 48.1 24 0.00051 27.5 3.3 32 122-154 17-48 (215)
283 TIGR02816 pfaB_fam PfaB family 47.8 18 0.0004 32.5 2.9 31 122-153 255-286 (538)
284 PF11713 Peptidase_C80: Peptid 46.5 10 0.00022 27.7 1.0 50 95-144 56-116 (157)
285 cd07232 Pat_PLPL Patain-like p 45.4 14 0.0003 32.0 1.8 37 124-161 88-124 (407)
286 PLN03006 carbonate dehydratase 45.2 54 0.0012 27.0 4.8 31 117-148 158-188 (301)
287 cd07231 Pat_SDP1-like Sugar-De 44.7 15 0.00032 30.4 1.7 34 123-157 88-121 (323)
288 cd07229 Pat_TGL3_like Triacylg 44.7 16 0.00036 31.2 2.0 39 122-161 102-140 (391)
289 PRK06731 flhF flagellar biosyn 44.7 1.7E+02 0.0037 23.8 7.8 64 92-163 154-219 (270)
290 TIGR00521 coaBC_dfp phosphopan 44.6 1.2E+02 0.0025 26.3 7.1 73 65-139 113-193 (390)
291 PF00326 Peptidase_S9: Prolyl 44.6 33 0.00072 26.4 3.7 61 63-127 143-208 (213)
292 PF13728 TraF: F plasmid trans 44.3 67 0.0014 25.0 5.2 43 65-107 123-165 (215)
293 COG3340 PepE Peptidase E [Amin 43.8 1.1E+02 0.0024 23.8 6.0 37 64-100 32-70 (224)
294 COG2939 Carboxypeptidase C (ca 43.8 30 0.00064 30.6 3.4 55 285-340 427-489 (498)
295 cd07205 Pat_PNPLA6_PNPLA7_NTE1 43.2 36 0.00077 25.3 3.5 30 123-153 20-49 (175)
296 PRK10081 entericidin B membran 43.2 37 0.00081 18.9 2.6 11 1-11 1-11 (48)
297 KOG0781 Signal recognition par 42.9 1.1E+02 0.0023 27.3 6.4 88 69-164 443-539 (587)
298 PF10081 Abhydrolase_9: Alpha/ 42.6 40 0.00086 27.4 3.7 36 132-167 109-147 (289)
299 PF14253 AbiH: Bacteriophage a 41.8 28 0.0006 28.1 2.9 22 123-144 226-247 (270)
300 KOG2872 Uroporphyrinogen decar 41.6 66 0.0014 26.2 4.7 68 65-140 253-336 (359)
301 COG0482 TrmU Predicted tRNA(5- 41.3 83 0.0018 26.7 5.5 66 65-138 5-70 (356)
302 PF03283 PAE: Pectinacetyleste 40.6 91 0.002 26.7 5.8 35 132-166 156-194 (361)
303 PF13207 AAA_17: AAA domain; P 40.3 35 0.00076 23.2 2.9 32 67-100 1-32 (121)
304 COG0279 GmhA Phosphoheptose is 40.2 66 0.0014 23.8 4.1 71 68-144 44-121 (176)
305 PF03610 EIIA-man: PTS system 39.7 1.2E+02 0.0026 20.6 6.3 75 66-150 2-76 (116)
306 PF00004 AAA: ATPase family as 39.4 71 0.0015 21.9 4.5 53 68-128 1-53 (132)
307 COG0529 CysC Adenylylsulfate k 39.2 66 0.0014 24.2 4.1 61 63-125 21-85 (197)
308 cd07208 Pat_hypo_Ecoli_yjju_li 39.0 41 0.00089 27.1 3.5 32 123-155 18-50 (266)
309 PRK14974 cell division protein 38.9 2.2E+02 0.0047 24.2 7.7 65 91-163 221-287 (336)
310 cd00382 beta_CA Carbonic anhyd 38.6 60 0.0013 22.4 3.8 31 116-147 44-74 (119)
311 cd00883 beta_CA_cladeA Carboni 37.7 55 0.0012 24.7 3.8 32 117-149 67-98 (182)
312 PRK15219 carbonic anhydrase; P 37.6 39 0.00085 26.9 3.0 32 117-149 129-160 (245)
313 KOG3551 Syntrophins (type beta 37.1 33 0.00071 29.0 2.5 41 36-76 449-497 (506)
314 COG0426 FpaA Uncharacterized f 37.1 40 0.00086 28.9 3.1 87 53-157 237-332 (388)
315 TIGR02764 spore_ybaN_pdaB poly 36.9 20 0.00044 27.1 1.4 34 65-99 152-188 (191)
316 PRK13397 3-deoxy-7-phosphohept 36.9 2.2E+02 0.0048 22.9 8.2 39 63-103 121-160 (250)
317 PF08484 Methyltransf_14: C-me 36.6 69 0.0015 23.6 4.0 52 115-166 51-103 (160)
318 PLN02154 carbonic anhydrase 35.3 1.1E+02 0.0024 25.1 5.2 32 117-149 152-183 (290)
319 PRK00091 miaA tRNA delta(2)-is 35.1 1.6E+02 0.0035 24.5 6.3 71 65-137 4-99 (307)
320 PF02230 Abhydrolase_2: Phosph 34.7 97 0.0021 24.0 4.9 58 64-127 155-214 (216)
321 cd03146 GAT1_Peptidase_E Type 34.6 2.2E+02 0.0047 22.1 6.8 83 63-148 30-129 (212)
322 cd07212 Pat_PNPLA9 Patatin-lik 34.5 68 0.0015 26.8 4.1 19 135-153 35-53 (312)
323 COG0324 MiaA tRNA delta(2)-iso 34.2 1.8E+02 0.004 24.2 6.4 75 65-141 3-102 (308)
324 cd07224 Pat_like Patatin-like 33.9 53 0.0012 25.9 3.3 32 123-154 19-51 (233)
325 cd00006 PTS_IIA_man PTS_IIA, P 33.6 1.6E+02 0.0035 20.3 6.0 72 66-148 3-74 (122)
326 TIGR02884 spore_pdaA delta-lac 33.2 36 0.00078 26.7 2.3 34 65-99 187-221 (224)
327 TIGR02873 spore_ylxY probable 33.0 36 0.00077 27.6 2.2 34 65-99 231-264 (268)
328 COG0288 CynT Carbonic anhydras 32.7 76 0.0016 24.6 3.8 36 115-151 76-111 (207)
329 PRK05282 (alpha)-aspartyl dipe 32.6 1.4E+02 0.0029 23.7 5.3 38 64-101 31-70 (233)
330 PLN03019 carbonic anhydrase 32.2 1E+02 0.0022 25.8 4.6 33 116-149 200-232 (330)
331 cd07206 Pat_TGL3-4-5_SDP1 Tria 31.9 51 0.0011 27.2 2.9 30 127-157 93-122 (298)
332 PHA02114 hypothetical protein 31.1 84 0.0018 20.6 3.1 34 65-99 83-116 (127)
333 PF05577 Peptidase_S28: Serine 30.6 42 0.00091 29.5 2.5 38 286-326 379-416 (434)
334 TIGR01425 SRP54_euk signal rec 30.4 2.5E+02 0.0055 24.8 6.9 64 92-163 182-247 (429)
335 PF01583 APS_kinase: Adenylyls 29.8 86 0.0019 23.0 3.5 35 64-99 1-37 (156)
336 PLN03014 carbonic anhydrase 29.6 1.3E+02 0.0027 25.5 4.7 32 117-149 206-237 (347)
337 PRK14194 bifunctional 5,10-met 29.5 90 0.0019 25.8 3.9 36 117-152 142-182 (301)
338 PF07521 RMMBL: RNA-metabolisi 29.4 1E+02 0.0022 16.6 4.0 31 94-137 8-38 (43)
339 PLN00416 carbonate dehydratase 29.3 93 0.002 25.1 3.9 33 116-149 125-157 (258)
340 COG3887 Predicted signaling pr 29.1 1.1E+02 0.0024 27.9 4.6 100 63-166 257-377 (655)
341 cd07204 Pat_PNPLA_like Patatin 28.5 82 0.0018 25.1 3.5 20 135-154 34-53 (243)
342 PF12242 Eno-Rase_NADH_b: NAD( 28.2 57 0.0012 20.5 2.0 22 132-153 40-61 (78)
343 cd00884 beta_CA_cladeB Carboni 28.2 1.5E+02 0.0033 22.6 4.7 33 116-149 72-104 (190)
344 PRK07313 phosphopantothenoylcy 27.9 1.2E+02 0.0027 22.8 4.2 60 64-125 113-178 (182)
345 cd08769 DAP_dppA_2 Peptidase M 27.7 2.4E+02 0.0051 23.0 5.9 50 282-337 146-198 (270)
346 PF00484 Pro_CA: Carbonic anhy 27.6 1.2E+02 0.0027 21.9 4.1 34 115-149 39-72 (153)
347 PLN02200 adenylate kinase fami 27.3 1.3E+02 0.0029 23.7 4.5 35 62-98 40-74 (234)
348 PRK12595 bifunctional 3-deoxy- 26.6 4.2E+02 0.009 22.8 7.7 72 63-142 224-299 (360)
349 PF01171 ATP_bind_3: PP-loop f 26.6 2.8E+02 0.006 20.8 6.5 79 67-151 33-116 (182)
350 TIGR01663 PNK-3'Pase polynucle 26.5 1.9E+02 0.0041 26.3 5.7 37 63-101 367-403 (526)
351 COG0331 FabD (acyl-carrier-pro 26.4 66 0.0014 26.8 2.7 20 132-151 85-104 (310)
352 COG3946 VirJ Type IV secretory 26.0 3.5E+02 0.0076 23.7 6.7 98 65-164 49-154 (456)
353 cd07222 Pat_PNPLA4 Patatin-lik 26.0 60 0.0013 25.9 2.4 23 135-158 34-56 (246)
354 COG0218 Predicted GTPase [Gene 25.9 56 0.0012 25.0 2.0 53 284-339 136-196 (200)
355 PRK10437 carbonic anhydrase; P 25.8 78 0.0017 24.8 2.8 32 117-149 77-108 (220)
356 COG5441 Uncharacterized conser 25.5 3.9E+02 0.0085 22.2 7.8 96 66-162 3-123 (401)
357 cd05312 NAD_bind_1_malic_enz N 25.3 1.6E+02 0.0034 24.1 4.6 78 68-149 28-123 (279)
358 PRK04148 hypothetical protein; 25.3 1.5E+02 0.0032 21.1 3.9 30 132-165 18-47 (134)
359 cd01967 Nitrogenase_MoFe_alpha 25.1 4.3E+02 0.0092 23.0 7.6 42 64-105 87-131 (406)
360 PRK00131 aroK shikimate kinase 25.0 93 0.002 22.8 3.2 34 65-100 4-37 (175)
361 TIGR02739 TraF type-F conjugat 24.9 2.3E+02 0.0049 22.9 5.3 42 66-107 154-195 (256)
362 PF12692 Methyltransf_17: S-ad 24.7 1.1E+02 0.0024 22.2 3.2 66 75-145 38-105 (160)
363 COG2069 CdhD CO dehydrogenase/ 24.5 2.5E+02 0.0055 23.1 5.4 54 83-141 155-208 (403)
364 PF10686 DUF2493: Protein of u 24.5 1.1E+02 0.0024 18.8 2.8 31 65-98 32-63 (71)
365 COG1506 DAP2 Dipeptidyl aminop 24.4 2.4E+02 0.0052 26.4 6.2 44 63-107 550-598 (620)
366 COG0622 Predicted phosphoester 24.2 1.8E+02 0.0038 21.8 4.4 39 118-167 98-136 (172)
367 PF13709 DUF4159: Domain of un 24.1 2.5E+02 0.0054 21.8 5.3 38 283-320 53-90 (207)
368 COG0541 Ffh Signal recognition 24.0 5.1E+02 0.011 23.0 7.4 48 115-163 198-247 (451)
369 cd07218 Pat_iPLA2 Calcium-inde 23.8 1E+02 0.0022 24.6 3.3 20 135-154 33-52 (245)
370 TIGR02069 cyanophycinase cyano 23.8 3.1E+02 0.0067 22.0 6.0 38 64-101 28-66 (250)
371 cd07221 Pat_PNPLA3 Patatin-lik 23.8 1.1E+02 0.0024 24.6 3.5 22 133-154 33-54 (252)
372 PRK13982 bifunctional SbtC-lik 23.5 5.5E+02 0.012 23.1 7.9 103 64-168 180-307 (475)
373 PF03490 Varsurf_PPLC: Variant 23.4 77 0.0017 17.8 1.7 27 112-139 6-32 (51)
374 cd07220 Pat_PNPLA2 Patatin-lik 23.2 1.1E+02 0.0024 24.5 3.4 22 133-154 37-58 (249)
375 PRK14729 miaA tRNA delta(2)-is 23.0 4.5E+02 0.0097 21.9 7.0 72 66-140 5-101 (300)
376 cd01981 Pchlide_reductase_B Pc 22.7 3E+02 0.0064 24.3 6.2 73 64-142 85-173 (430)
377 PRK10626 hypothetical protein; 22.6 3.3E+02 0.0073 21.7 5.7 12 1-12 1-12 (239)
378 PRK14179 bifunctional 5,10-met 22.5 1.8E+02 0.0038 24.0 4.4 36 117-152 141-181 (284)
379 KOG1411 Aspartate aminotransfe 22.4 5E+02 0.011 22.2 8.7 112 40-166 159-291 (427)
380 PRK13703 conjugal pilus assemb 22.2 2.3E+02 0.0049 22.8 4.8 41 67-107 148-188 (248)
381 COG1092 Predicted SAM-dependen 21.2 2.2E+02 0.0047 24.8 4.8 48 92-140 290-337 (393)
382 PLN02840 tRNA dimethylallyltra 21.0 4.6E+02 0.01 23.1 6.8 75 64-140 20-119 (421)
383 PF06107 DUF951: Bacterial pro 20.7 96 0.0021 18.1 1.8 23 317-339 34-56 (57)
384 TIGR02683 upstrm_HI1419 probab 20.7 1.4E+02 0.003 19.5 3.0 30 41-76 50-79 (95)
385 cd03378 beta_CA_cladeC Carboni 20.6 1.8E+02 0.004 21.2 3.8 31 117-148 78-108 (154)
386 COG3621 Patatin [General funct 20.6 2.4E+02 0.0053 23.7 4.7 53 92-154 8-64 (394)
387 COG1598 Predicted nuclease of 20.4 1.8E+02 0.0038 18.0 3.2 32 91-126 14-45 (73)
388 cd01014 nicotinamidase_related 20.3 3.4E+02 0.0075 19.6 5.5 48 120-168 89-136 (155)
389 cd01301 rDP_like renal dipepti 20.2 3.5E+02 0.0076 22.6 5.8 75 64-144 188-268 (309)
390 PRK10867 signal recognition pa 20.2 6.2E+02 0.013 22.5 8.8 64 91-162 182-247 (433)
391 COG4667 Predicted esterase of 20.2 1.1E+02 0.0024 24.7 2.7 41 120-162 29-70 (292)
392 PF02882 THF_DHG_CYH_C: Tetrah 20.0 1.8E+02 0.004 21.4 3.7 37 116-152 18-59 (160)
393 TIGR03632 bact_S11 30S ribosom 20.0 2.4E+02 0.0052 19.1 4.0 51 110-161 41-93 (108)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=3.6e-37 Score=251.68 Aligned_cols=274 Identities=18% Similarity=0.187 Sum_probs=175.8
Q ss_pred CCCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC-------
Q 038973 38 VTSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP------- 110 (341)
Q Consensus 38 ~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~------- 110 (341)
.+..+++. +|.+++|...|++ +++|||+||+++++..|..+++.|.++ |+|+++|+||||.|+.+.
T Consensus 8 ~~~~~~~~-~~~~i~y~~~G~~----~~~vlllHG~~~~~~~w~~~~~~L~~~--~~vi~~DlpG~G~S~~~~~~~~~~~ 80 (294)
T PLN02824 8 VETRTWRW-KGYNIRYQRAGTS----GPALVLVHGFGGNADHWRKNTPVLAKS--HRVYAIDLLGYGYSDKPNPRSAPPN 80 (294)
T ss_pred CCCceEEE-cCeEEEEEEcCCC----CCeEEEECCCCCChhHHHHHHHHHHhC--CeEEEEcCCCCCCCCCCcccccccc
Confidence 34556666 8999999998852 379999999999999999999999874 689999999999998542
Q ss_pred -CCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchh---hhhhcC
Q 038973 111 -LRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSR---EALQRL 186 (341)
Q Consensus 111 -~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~---~~~~~~ 186 (341)
.++++++++|+.+++++++. ++++++||||||.+++.+|.++|++|+++|++++............... ..+...
T Consensus 81 ~~~~~~~~a~~l~~~l~~l~~-~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (294)
T PLN02824 81 SFYTFETWGEQLNDFCSDVVG-DPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNL 159 (294)
T ss_pred ccCCHHHHHHHHHHHHHHhcC-CCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHH
Confidence 47899999999999999998 8999999999999999999999999999999998642110000000000 000000
Q ss_pred cchhhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhccc
Q 038973 187 PVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYA 266 (341)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (341)
........ .+.............+.. . ...... ...+....+........ . ...+ ..... ..
T Consensus 160 ~~~~~~~~---~~~~~~~~~~~~~~~~~~--~-~~~~~~---~~~~~~~~~~~~~~~~~---~----~~~~-~~~~~-~~ 221 (294)
T PLN02824 160 LRETAVGK---AFFKSVATPETVKNILCQ--C-YHDDSA---VTDELVEAILRPGLEPG---A----VDVF-LDFIS-YS 221 (294)
T ss_pred HhchhHHH---HHHHhhcCHHHHHHHHHH--h-ccChhh---ccHHHHHHHHhccCCch---H----HHHH-HHHhc-cc
Confidence 00000000 000000000000000000 0 000000 11111222111110000 0 0000 00000 00
Q ss_pred ccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhhC
Q 038973 267 KWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 267 ~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
........++++++|+|+|+|++|..+|.+.++.+.+..+++++++++++||+++.| |+++.+.|.+|+++
T Consensus 222 ----~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 222 ----GGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred ----cccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 000112236788999999999999999999999999988889999999999999999 99999999999975
No 2
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=4.1e-36 Score=243.05 Aligned_cols=258 Identities=20% Similarity=0.270 Sum_probs=169.4
Q ss_pred ceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC-CCCccchHHH
Q 038973 42 RIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP-LRTVKTEACD 120 (341)
Q Consensus 42 ~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~d 120 (341)
++.+ +|.+++|...+.+ +.+++|||+||++++...|.++++.|.+ +|+|+++|+||||.|+.+. .++++++++|
T Consensus 6 ~~~~-~~~~~~~~~~~~~--~~~~plvllHG~~~~~~~w~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~ 80 (276)
T TIGR02240 6 TIDL-DGQSIRTAVRPGK--EGLTPLLIFNGIGANLELVFPFIEALDP--DLEVIAFDVPGVGGSSTPRHPYRFPGLAKL 80 (276)
T ss_pred Eecc-CCcEEEEEEecCC--CCCCcEEEEeCCCcchHHHHHHHHHhcc--CceEEEECCCCCCCCCCCCCcCcHHHHHHH
Confidence 3444 8889999886422 2447999999999999999999999866 5889999999999998543 4689999999
Q ss_pred HHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhc
Q 038973 121 VEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYF 200 (341)
Q Consensus 121 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (341)
+.+++++++. ++++|+||||||.+++.+|.++|++|+++|++++....... +.. .......... ........
T Consensus 81 ~~~~i~~l~~-~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~-~~~~~~~~~~----~~~~~~~~ 152 (276)
T TIGR02240 81 AARMLDYLDY-GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMV--PGK-PKVLMMMASP----RRYIQPSH 152 (276)
T ss_pred HHHHHHHhCc-CceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccC--CCc-hhHHHHhcCc----hhhhcccc
Confidence 9999999998 79999999999999999999999999999999987532100 000 0000000000 00000000
Q ss_pred hhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCC
Q 038973 201 PWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFP 280 (341)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (341)
. ......++.. ... .+.+........... . .. ......... .. .+ .....++
T Consensus 153 ~----~~~~~~~~~~---------~~~-~~~~~~~~~~~~~~~-~-~~--~~~~~~~~~----~~-~~-----~~~~~l~ 204 (276)
T TIGR02240 153 G----IHIAPDIYGG---------AFR-RDPELAMAHASKVRS-G-GK--LGYYWQLFA----GL-GW-----TSIHWLH 204 (276)
T ss_pred c----cchhhhhccc---------eee-ccchhhhhhhhhccc-C-CC--chHHHHHHH----Hc-CC-----chhhHhh
Confidence 0 0000000000 000 000001000000000 0 00 000000000 00 00 1112367
Q ss_pred CCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhhC
Q 038973 281 DNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 281 ~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
++++|+|+|+|++|+++|++..+++.+.+|+++++++++ ||+++.| |+++++.|.+|+++
T Consensus 205 ~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 205 KIQQPTLVLAGDDDPIIPLINMRLLAWRIPNAELHIIDD-GHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred cCCCCEEEEEeCCCCcCCHHHHHHHHHhCCCCEEEEEcC-CCchhhccHHHHHHHHHHHHHH
Confidence 788999999999999999999999999999999999985 9999999 99999999999863
No 3
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=4e-35 Score=227.03 Aligned_cols=283 Identities=17% Similarity=0.187 Sum_probs=179.4
Q ss_pred CCCCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC---CCC
Q 038973 37 PVTSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP---LRT 113 (341)
Q Consensus 37 ~~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~---~~~ 113 (341)
..+..+++. +|.+++|.+.|++ .+|.|+++||++.++.+|+.+...|+.+ ||+|+++|+||+|.|+.+. .|+
T Consensus 21 ~~~hk~~~~-~gI~~h~~e~g~~---~gP~illlHGfPe~wyswr~q~~~la~~-~~rviA~DlrGyG~Sd~P~~~~~Yt 95 (322)
T KOG4178|consen 21 AISHKFVTY-KGIRLHYVEGGPG---DGPIVLLLHGFPESWYSWRHQIPGLASR-GYRVIAPDLRGYGFSDAPPHISEYT 95 (322)
T ss_pred hcceeeEEE-ccEEEEEEeecCC---CCCEEEEEccCCccchhhhhhhhhhhhc-ceEEEecCCCCCCCCCCCCCcceee
Confidence 344444554 8899999999875 5799999999999999999999999987 7999999999999999766 479
Q ss_pred ccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhh----cCcch
Q 038973 114 VKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQ----RLPVE 189 (341)
Q Consensus 114 ~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 189 (341)
+..++.|+..++++++. ++++++||+||+++|+.+|..+|++|+++|+++....+.....- ......+. .....
T Consensus 96 ~~~l~~di~~lld~Lg~-~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~-~~~~~~f~~~~y~~~fQ 173 (322)
T KOG4178|consen 96 IDELVGDIVALLDHLGL-KKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPL-DSSKAIFGKSYYICLFQ 173 (322)
T ss_pred HHHHHHHHHHHHHHhcc-ceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchh-hhhccccCccceeEecc
Confidence 99999999999999998 89999999999999999999999999999999987641100000 00000000 00000
Q ss_pred hhhhHH--Hh-hhchhhhHHhhhcccccccccc---cccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhh
Q 038973 190 NQRTFR--IA-YYFPWLLNLWMSQKWFPTLSIM---SGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKT 263 (341)
Q Consensus 190 ~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (341)
...... .. .....+......++........ ...+..++.++.+.+...... ....... +.++.+.
T Consensus 174 ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~----~g~~gpl----Nyyrn~~- 244 (322)
T KOG4178|consen 174 EPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQI----DGFTGPL----NYYRNFR- 244 (322)
T ss_pred ccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhcccc----ccccccc----hhhHHHh-
Confidence 000000 00 0000000000000000000000 000111222222222221111 0011111 1111111
Q ss_pred cccccccCCCCCCCCCCCCCccEEEEEeecCCCCChH-HHHHHHhhCCCc-EEEEecCCCcccccC-HHHHHHHHHHHhh
Q 038973 264 GYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQ-INQFISEKLPWI-QYHEVPDAGHLFIFE-RKFCEAIIRALLV 340 (341)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~-~~~~~~~~~~~~-~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 340 (341)
.+|+ .....+.++++|+++|+|++|.+.+.. ....+.+.+|+. +.++++|+||+++.| |+++++.|.+|++
T Consensus 245 --r~w~----a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~ 318 (322)
T KOG4178|consen 245 --RNWE----AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFIN 318 (322)
T ss_pred --hCch----hccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHH
Confidence 1111 122336678888999999999998866 455666677876 889999999999999 9999999999987
Q ss_pred C
Q 038973 341 R 341 (341)
Q Consensus 341 ~ 341 (341)
+
T Consensus 319 ~ 319 (322)
T KOG4178|consen 319 S 319 (322)
T ss_pred h
Confidence 3
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=7e-35 Score=238.87 Aligned_cols=272 Identities=13% Similarity=0.079 Sum_probs=174.0
Q ss_pred CCCCCCCCCceEccCC-----cEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCC
Q 038973 33 PGGPPVTSPRIKLSDG-----RHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESD 107 (341)
Q Consensus 33 ~~~~~~~~~~~~~~~g-----~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~ 107 (341)
....++...++++ ++ .+++|...|.+ .+++|||+||++++...|..+++.|.++ ||+|+++|+||||.|+
T Consensus 14 ~~~~~~~~~~~~~-~~~~~~~~~i~y~~~G~~---~~~~lvliHG~~~~~~~w~~~~~~L~~~-gy~vi~~Dl~G~G~S~ 88 (302)
T PRK00870 14 LPDYPFAPHYVDV-DDGDGGPLRMHYVDEGPA---DGPPVLLLHGEPSWSYLYRKMIPILAAA-GHRVIAPDLIGFGRSD 88 (302)
T ss_pred CcCCCCCceeEee-cCCCCceEEEEEEecCCC---CCCEEEEECCCCCchhhHHHHHHHHHhC-CCEEEEECCCCCCCCC
Confidence 3445667777777 55 68999998864 3579999999999999999999999765 8999999999999997
Q ss_pred CCC---CCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhh
Q 038973 108 PHP---LRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQ 184 (341)
Q Consensus 108 ~~~---~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~ 184 (341)
.+. .++++++++|+.+++++++. ++++++||||||.+++.+|.++|++|+++|++++.........+ .....+.
T Consensus 89 ~~~~~~~~~~~~~a~~l~~~l~~l~~-~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~~~~~~~ 165 (302)
T PRK00870 89 KPTRREDYTYARHVEWMRSWFEQLDL-TDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMP--DAFWAWR 165 (302)
T ss_pred CCCCcccCCHHHHHHHHHHHHHHcCC-CCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccch--HHHhhhh
Confidence 643 46899999999999999998 79999999999999999999999999999999875321100000 0000000
Q ss_pred cCcchhhhhHHHhhhchhh-hHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhh
Q 038973 185 RLPVENQRTFRIAYYFPWL-LNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKT 263 (341)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (341)
.... ..+.. ........ ...... .+....+.. ........ .. ..... ....
T Consensus 166 ~~~~----------~~~~~~~~~~~~~~----------~~~~~~---~~~~~~~~~-~~~~~~~~--~~-~~~~~-~~~~ 217 (302)
T PRK00870 166 AFSQ----------YSPVLPVGRLVNGG----------TVRDLS---DAVRAAYDA-PFPDESYK--AG-ARAFP-LLVP 217 (302)
T ss_pred cccc----------cCchhhHHHHhhcc----------ccccCC---HHHHHHhhc-ccCChhhh--cc-hhhhh-hcCC
Confidence 0000 00000 00000000 000000 011111100 00000000 00 00000 0000
Q ss_pred -ccccccc-CCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcE---EEEecCCCcccccC-HHHHHHHHHH
Q 038973 264 -GYAKWEF-DPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQ---YHEVPDAGHLFIFE-RKFCEAIIRA 337 (341)
Q Consensus 264 -~~~~~~~-~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~---~~~~~~~gH~~~~e-p~~~~~~i~~ 337 (341)
....... ........+.++++|+++|+|++|.++|... +++.+.+|+++ +.+++++||+++.| |+++.+.|.+
T Consensus 218 ~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~ 296 (302)
T PRK00870 218 TSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLE 296 (302)
T ss_pred CCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHH
Confidence 0000000 0000011256788889999999999999866 88999999876 88999999999999 9999999999
Q ss_pred HhhC
Q 038973 338 LLVR 341 (341)
Q Consensus 338 fl~~ 341 (341)
|+++
T Consensus 297 fl~~ 300 (302)
T PRK00870 297 FIRA 300 (302)
T ss_pred HHhc
Confidence 9864
No 5
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.5e-35 Score=242.25 Aligned_cols=271 Identities=17% Similarity=0.156 Sum_probs=170.0
Q ss_pred CCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC-CCCccch
Q 038973 39 TSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP-LRTVKTE 117 (341)
Q Consensus 39 ~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~-~~~~~~~ 117 (341)
+..+++. +|.+++|...|++ ++|||+||++++...|..+++.|.++ ++|+++|+||||.|+.+. .++++++
T Consensus 8 ~~~~~~~-~g~~i~y~~~G~g-----~~vvllHG~~~~~~~w~~~~~~L~~~--~~via~D~~G~G~S~~~~~~~~~~~~ 79 (295)
T PRK03592 8 EMRRVEV-LGSRMAYIETGEG-----DPIVFLHGNPTSSYLWRNIIPHLAGL--GRCLAPDLIGMGASDKPDIDYTFADH 79 (295)
T ss_pred cceEEEE-CCEEEEEEEeCCC-----CEEEEECCCCCCHHHHHHHHHHHhhC--CEEEEEcCCCCCCCCCCCCCCCHHHH
Confidence 4455655 8999999999853 69999999999999999999999875 589999999999998654 4799999
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeeccccccc-CCCCCccchhhhhhcCcchhhhhHHH
Q 038973 118 ACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYW-WPCLPANLSREALQRLPVENQRTFRI 196 (341)
Q Consensus 118 ~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (341)
++|+.+++++++. ++++++||||||.+++.++.++|++|+++|++++..... +...+.. ....+ ...
T Consensus 80 a~dl~~ll~~l~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~-~~~~~----------~~~ 147 (295)
T PRK03592 80 ARYLDAWFDALGL-DDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPA-VRELF----------QAL 147 (295)
T ss_pred HHHHHHHHHHhCC-CCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchh-HHHHH----------HHH
Confidence 9999999999998 899999999999999999999999999999999843210 0000000 00000 000
Q ss_pred hh-h-chhhh--HHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhc-c-ccccc
Q 038973 197 AY-Y-FPWLL--NLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTG-Y-AKWEF 270 (341)
Q Consensus 197 ~~-~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~ 270 (341)
.. . ..... ...+....+.. .....+...+...+........ .. ...... ....... . .....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~-~~~~~~~~~~~~~~~ 215 (295)
T PRK03592 148 RSPGEGEEMVLEENVFIERVLPG-----SILRPLSDEEMAVYRRPFPTPE---SR---RPTLSW-PRELPIDGEPADVVA 215 (295)
T ss_pred hCcccccccccchhhHHhhcccC-----cccccCCHHHHHHHHhhcCCch---hh---hhhhhh-hhhcCCCCcchhhHh
Confidence 00 0 00000 00000000000 0000111111111111111110 00 000000 0000000 0 00000
Q ss_pred CCCCCCCCCCCCCccEEEEEeecCCCCChHHH-HHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhhC
Q 038973 271 DPTDLINPFPDNEGSVHIWQGCEDRIIPSQIN-QFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 271 ~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~-~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
...+....+.++++|+|+|+|++|.++++... +.+.+..+++++++++++||+++.| |+++++.|.+|+++
T Consensus 216 ~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~ 288 (295)
T PRK03592 216 LVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRR 288 (295)
T ss_pred hhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHH
Confidence 00011223567889999999999999954444 4455667899999999999999999 99999999999864
No 6
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=5.5e-35 Score=243.64 Aligned_cols=269 Identities=17% Similarity=0.153 Sum_probs=172.9
Q ss_pred CCCCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCc-chhhHHHHHHhcCceEEEEcCCCCCCCCCCCC--CC
Q 038973 37 PVTSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDL-NLPVSQELIEELKIYFLSFDRPGYGESDPHPL--RT 113 (341)
Q Consensus 37 ~~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~-~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~--~~ 113 (341)
..++.++...+|.+++|..++++.++.+++|||+||++++... |..++..|.++ ||+|+++|+||||.|+.... .+
T Consensus 60 ~~~~~~~~~~~g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~ 138 (349)
T PLN02385 60 KTEESYEVNSRGVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIARKIASS-GYGVFAMDYPGFGLSEGLHGYIPS 138 (349)
T ss_pred ceeeeeEEcCCCCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHHHHHHhC-CCEEEEecCCCCCCCCCCCCCcCC
Confidence 3455667778999999999987654567899999999988765 57888888765 89999999999999986544 38
Q ss_pred ccchHHHHHHHHHHhCC-----CCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcc
Q 038973 114 VKTEACDVEQLADKLQI-----GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPV 188 (341)
Q Consensus 114 ~~~~~~dl~~~l~~l~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (341)
++++++|+.++++.++. +.+++|+||||||.+++.++.++|++++++|+++|.........+....
T Consensus 139 ~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~--------- 209 (349)
T PLN02385 139 FDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLV--------- 209 (349)
T ss_pred HHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHH---------
Confidence 89999999999988753 1379999999999999999999999999999999865321100000000
Q ss_pred hhhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhccccc
Q 038973 189 ENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKW 268 (341)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (341)
...........+. ..+++..... ...+................. ...........+.. .
T Consensus 210 -~~~~~~~~~~~p~-------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~-~------- 268 (349)
T PLN02385 210 -LQILILLANLLPK-------AKLVPQKDLA---ELAFRDLKKRKMAEYNVIAYK--DKPRLRTAVELLRT-T------- 268 (349)
T ss_pred -HHHHHHHHHHCCC-------ceecCCCccc---cccccCHHHHHHhhcCcceeC--CCcchHHHHHHHHH-H-------
Confidence 0000000000000 0001100000 000110001111110000000 00000000111110 0
Q ss_pred ccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhC--CCcEEEEecCCCcccccC-HHH----HHHHHHHHhh
Q 038973 269 EFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKL--PWIQYHEVPDAGHLFIFE-RKF----CEAIIRALLV 340 (341)
Q Consensus 269 ~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e-p~~----~~~~i~~fl~ 340 (341)
.++...+.++++|+|+|+|++|.++|++.++.+++.+ +++++++++|+||+++.+ |++ +.+.|.+||+
T Consensus 269 ----~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~ 343 (349)
T PLN02385 269 ----QEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLD 343 (349)
T ss_pred ----HHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHH
Confidence 0122336678888999999999999999999999987 568999999999999987 776 7777888885
No 7
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=4.6e-35 Score=244.16 Aligned_cols=274 Identities=16% Similarity=0.158 Sum_probs=168.4
Q ss_pred ceEccCCc-EEEEEEccCCC-CCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC--CCCccch
Q 038973 42 RIKLSDGR-HVAYREAGVPK-EEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP--LRTVKTE 117 (341)
Q Consensus 42 ~~~~~~g~-~l~~~~~g~~~-~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~--~~~~~~~ 117 (341)
++.. +|. +++|...|++. ...+|+|||+||++++...|.++++.|.+ +|+|+++|+||||.|+.+. .++++++
T Consensus 65 ~~~~-~g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~--~~~via~Dl~G~G~S~~~~~~~~~~~~~ 141 (360)
T PLN02679 65 KWKW-KGEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAK--NYTVYAIDLLGFGASDKPPGFSYTMETW 141 (360)
T ss_pred eEEE-CCceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhc--CCEEEEECCCCCCCCCCCCCccccHHHH
Confidence 3444 566 99999998641 12357999999999999999999998865 6999999999999998653 4689999
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHh-hccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHH
Q 038973 118 ACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLK-YIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRI 196 (341)
Q Consensus 118 ~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~-~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (341)
++++.+++++++. ++++|+||||||.+++.++. .+|++|+++|++++............ ................
T Consensus 142 a~~l~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 217 (360)
T PLN02679 142 AELILDFLEEVVQ-KPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDD---WRIKLLLPLLWLIDFL 217 (360)
T ss_pred HHHHHHHHHHhcC-CCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccch---HHHhhhcchHHHHHHH
Confidence 9999999999998 89999999999999998887 47999999999998642110000000 0000000000000000
Q ss_pred h---hhchhhhHH----hhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccc
Q 038973 197 A---YYFPWLLNL----WMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWE 269 (341)
Q Consensus 197 ~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (341)
. .....+... .....++.. ......... .+....+...... . .....+.. ......
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~-~------~~~~~~~~-~~~~~~--- 280 (360)
T PLN02679 218 LKQRGIASALFNRVKQRDNLKNILLS---VYGNKEAVD---DELVEIIRGPADD-E------GALDAFVS-IVTGPP--- 280 (360)
T ss_pred hhchhhHHHHHHHhcCHHHHHHHHHH---hccCcccCC---HHHHHHHHhhccC-C------ChHHHHHH-HHhcCC---
Confidence 0 000000000 000000000 000001111 1111111100000 0 00000100 000000
Q ss_pred cCCCCCCCCCCCCCccEEEEEeecCCCCChHH-----HHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhhC
Q 038973 270 FDPTDLINPFPDNEGSVHIWQGCEDRIIPSQI-----NQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 270 ~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~-----~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
..+....++++++|||+|+|++|.++|++. .+.+.+.+|++++++++|+||+++.| |+++++.|.+|+++
T Consensus 281 --~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~ 356 (360)
T PLN02679 281 --GPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQ 356 (360)
T ss_pred --CCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHHHh
Confidence 001122356788999999999999998763 34577788999999999999999999 99999999999963
No 8
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=8.5e-35 Score=235.57 Aligned_cols=269 Identities=15% Similarity=0.168 Sum_probs=169.6
Q ss_pred CCCCCCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC--CC
Q 038973 35 GPPVTSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP--LR 112 (341)
Q Consensus 35 ~~~~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~--~~ 112 (341)
..++++.++++ +|.+++|...|+ +++|||+||++.+...|..+++.|.+ +|+|+++|+||||.|+.+. .+
T Consensus 11 ~~~~~~~~~~~-~~~~i~y~~~G~-----~~~iv~lHG~~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~ 82 (286)
T PRK03204 11 LYPFESRWFDS-SRGRIHYIDEGT-----GPPILLCHGNPTWSFLYRDIIVALRD--RFRCVAPDYLGFGLSERPSGFGY 82 (286)
T ss_pred cccccceEEEc-CCcEEEEEECCC-----CCEEEEECCCCccHHHHHHHHHHHhC--CcEEEEECCCCCCCCCCCCcccc
Confidence 34566777777 778999999874 37999999999988899999988865 5899999999999998654 46
Q ss_pred CccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhh
Q 038973 113 TVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQR 192 (341)
Q Consensus 113 ~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (341)
+.+++++++.+++++++. ++++++||||||.+++.++..+|++|+++|++++... .+.......+.........
T Consensus 83 ~~~~~~~~~~~~~~~~~~-~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~-----~~~~~~~~~~~~~~~~~~~ 156 (286)
T PRK03204 83 QIDEHARVIGEFVDHLGL-DRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFW-----PADTLAMKAFSRVMSSPPV 156 (286)
T ss_pred CHHHHHHHHHHHHHHhCC-CCEEEEEECccHHHHHHHHHhChhheeEEEEECcccc-----CCCchhHHHHHHHhccccc
Confidence 889999999999999998 7999999999999999999999999999999887531 0000000000000000000
Q ss_pred hHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCC
Q 038973 193 TFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDP 272 (341)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (341)
.... +........++... .....+ .+....+...................+.. .... .
T Consensus 157 ~~~~------~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~ 214 (286)
T PRK03204 157 QYAI------LRRNFFVERLIPAG-----TEHRPS---SAVMAHYRAVQPNAAARRGVAEMPKQILA-ARPL-------L 214 (286)
T ss_pred hhhh------hhhhHHHHHhcccc-----ccCCCC---HHHHHHhcCCCCCHHHHHHHHHHHHhcch-hhHH-------H
Confidence 0000 00000001111100 000111 11111111110000000000000000000 0000 0
Q ss_pred CCCCCCCC--CCCccEEEEEeecCCCCChH-HHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHh
Q 038973 273 TDLINPFP--DNEGSVHIWQGCEDRIIPSQ-INQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALL 339 (341)
Q Consensus 273 ~~~~~~~~--~i~~Pvlii~g~~D~~~p~~-~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl 339 (341)
.++...+. .+++||++|+|++|.++++. ..+.+.+.+|++++++++++||+++.| |+++++.|.+|+
T Consensus 215 ~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 215 ARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 01100011 12788999999999988654 578899999999999999999999999 999999999997
No 9
>PLN02578 hydrolase
Probab=100.00 E-value=2.2e-34 Score=239.93 Aligned_cols=275 Identities=16% Similarity=0.100 Sum_probs=169.6
Q ss_pred ccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC-CCCccchHHHHHH
Q 038973 45 LSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP-LRTVKTEACDVEQ 123 (341)
Q Consensus 45 ~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~dl~~ 123 (341)
..+|.+++|...|++ ++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+. .++.+.+++++.+
T Consensus 72 ~~~~~~i~Y~~~g~g-----~~vvliHG~~~~~~~w~~~~~~l~~--~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~ 144 (354)
T PLN02578 72 TWRGHKIHYVVQGEG-----LPIVLIHGFGASAFHWRYNIPELAK--KYKVYALDLLGFGWSDKALIEYDAMVWRDQVAD 144 (354)
T ss_pred EECCEEEEEEEcCCC-----CeEEEECCCCCCHHHHHHHHHHHhc--CCEEEEECCCCCCCCCCcccccCHHHHHHHHHH
Confidence 347889999988743 6899999999999999999999876 5899999999999998654 5788999999999
Q ss_pred HHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccch---hhhhhcCcchhhhhHHHhhhc
Q 038973 124 LADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLS---REALQRLPVENQRTFRIAYYF 200 (341)
Q Consensus 124 ~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 200 (341)
+++.+.. ++++++|||+||.+++.+|.++|++|+++|++++...+.......... .....................
T Consensus 145 ~i~~~~~-~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (354)
T PLN02578 145 FVKEVVK-EPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVV 223 (354)
T ss_pred HHHHhcc-CCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHH
Confidence 9999987 899999999999999999999999999999998865322111000000 000000000000000000000
Q ss_pred hhhhHHhhhc-cccccc-ccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCC
Q 038973 201 PWLLNLWMSQ-KWFPTL-SIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINP 278 (341)
Q Consensus 201 ~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (341)
..+....... ...... .......... +............... ....... ......... ...+....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~-----~~~~~~~~ 291 (354)
T PLN02578 224 LGFLFWQAKQPSRIESVLKSVYKDKSNV---DDYLVESITEPAADPN---AGEVYYR-LMSRFLFNQ-----SRYTLDSL 291 (354)
T ss_pred HHHHHHHhcCHHHHHHHHHHhcCCcccC---CHHHHHHHHhcccCCc---hHHHHHH-HHHHHhcCC-----CCCCHHHH
Confidence 0000000000 000000 0000000000 0111111100000000 0000000 000000000 00122334
Q ss_pred CCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhh
Q 038973 279 FPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLV 340 (341)
Q Consensus 279 ~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 340 (341)
++++++|+++|+|++|.++|.+.++.+++.+|+++++++ ++||+++.| |+++++.|.+|++
T Consensus 292 l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 292 LSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred hhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHHHHh
Confidence 678899999999999999999999999999999999999 589999999 9999999999986
No 10
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=1.4e-34 Score=231.21 Aligned_cols=245 Identities=13% Similarity=0.040 Sum_probs=157.6
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC--CCCccchHHHHHHHHHHhCCCCcEEEEEeccC
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP--LRTVKTEACDVEQLADKLQIGSKFYVIGISMG 142 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~G 142 (341)
-+|||+||++.+...|+.+++.|.+. +|+|+++|+||||.|+.+. .++++++++|+.++++.++..++++++|||||
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmG 82 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDAA-GFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIG 82 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhhC-CceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcc
Confidence 36999999999999999999999765 8999999999999997543 46899999999999999986349999999999
Q ss_pred hHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhhccccccccccccc
Q 038973 143 AYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGN 222 (341)
Q Consensus 143 g~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (341)
|.+++.++.++|++|+++|++++.... +.......+.... .. .... ....+.... ...
T Consensus 83 G~ia~~~a~~~p~~v~~lvl~~~~~~~-----~~~~~~~~~~~~~---------~~-~~~~-----~~~~~~~~~--~~~ 140 (255)
T PLN02965 83 GGSVTEALCKFTDKISMAIYVAAAMVK-----PGSIISPRLKNVM---------EG-TEKI-----WDYTFGEGP--DKP 140 (255)
T ss_pred hHHHHHHHHhCchheeEEEEEccccCC-----CCCCccHHHHhhh---------hc-cccc-----eeeeeccCC--CCC
Confidence 999999999999999999999986321 1000000000000 00 0000 000000000 000
Q ss_pred CCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHH
Q 038973 223 MDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQIN 302 (341)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~ 302 (341)
..... ...+................ .....+... ..... ....++...+..+++|+++|+|++|..+|++..
T Consensus 141 ~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~-~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~ 212 (255)
T PLN02965 141 PTGIM-MKPEFVRHYYYNQSPLEDYT---LSSKLLRPA---PVRAF-QDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQ 212 (255)
T ss_pred cchhh-cCHHHHHHHHhcCCCHHHHH---HHHHhcCCC---CCcch-hhhhhccchhhcCCCCEEEEEcCCCCCCCHHHH
Confidence 00000 00011111100000000000 000000000 00000 011122234557899999999999999999999
Q ss_pred HHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhh
Q 038973 303 QFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLV 340 (341)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 340 (341)
+.+++.+|++++++++++||+++.| |+++++.|.+|++
T Consensus 213 ~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~ 251 (255)
T PLN02965 213 DVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAVS 251 (255)
T ss_pred HHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999 9999999999986
No 11
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=3.5e-34 Score=241.45 Aligned_cols=294 Identities=15% Similarity=0.194 Sum_probs=174.7
Q ss_pred CCCCCCCCCCCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchh-hHHHHHH--hcCceEEEEcCCCCCCC
Q 038973 30 CGSPGGPPVTSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLP-VSQELIE--ELKIYFLSFDRPGYGES 106 (341)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~-~~~~l~~--~~~~~vi~~D~~G~G~S 106 (341)
..+.........++.+ +|.+++|...|++.++.+++|||+||++++...|.. +++.+.+ +.+|+|+++|+||||.|
T Consensus 168 ~~~~~~~~~~~~~~~~-~~~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S 246 (481)
T PLN03087 168 RWSDCDCKFCTSWLSS-SNESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRS 246 (481)
T ss_pred cccccccceeeeeEee-CCeEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCC
Confidence 3344444445555555 668999999998654556899999999999999985 4455553 23799999999999999
Q ss_pred CCCC--CCCccchHHHHH-HHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhh-h
Q 038973 107 DPHP--LRTVKTEACDVE-QLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSRE-A 182 (341)
Q Consensus 107 ~~~~--~~~~~~~~~dl~-~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~-~ 182 (341)
+.+. .++++++++++. .++++++. ++++++||||||.+++.+|.++|++|+++|++++.... .+...... .
T Consensus 247 ~~p~~~~ytl~~~a~~l~~~ll~~lg~-~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~----~~~~~~~~~~ 321 (481)
T PLN03087 247 PKPADSLYTLREHLEMIERSVLERYKV-KSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYP----VPKGVQATQY 321 (481)
T ss_pred cCCCCCcCCHHHHHHHHHHHHHHHcCC-CCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccc----cccchhHHHH
Confidence 8653 468999999995 89999998 89999999999999999999999999999999975321 11110000 0
Q ss_pred -hhcCcchhhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhh-------hhhH
Q 038973 183 -LQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQ-------QGIH 254 (341)
Q Consensus 183 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 254 (341)
.........+.. .. .......++. ........ .........+........... ...... ....
T Consensus 322 ~~~~~~~~~~~~~--~~-~~~~~~~w~~-~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~-~~~l~~~~~~~~~~~~~ 392 (481)
T PLN03087 322 VMRKVAPRRVWPP--IA-FGASVACWYE-HISRTICL----VICKNHRLWEFLTRLLTRNRM-RTFLIEGFFCHTHNAAW 392 (481)
T ss_pred HHHHhcccccCCc--cc-cchhHHHHHH-HHHhhhhc----ccccchHHHHHHHHHhhhhhh-hHHHHHHHHhccchhhH
Confidence 000000000000 00 0000000000 00000000 000000000000000000000 000000 0000
Q ss_pred HHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCccccc-C-HHHHH
Q 038973 255 ESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIF-E-RKFCE 332 (341)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e-p~~~~ 332 (341)
..+.. ....... .....+.....++++|+|+|+|++|.++|++..+.+++.+|++++++++++||+++. + |+.++
T Consensus 393 ~~l~~-~i~~~~~--~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa 469 (481)
T PLN03087 393 HTLHN-IICGSGS--KLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFA 469 (481)
T ss_pred HHHHH-HHhchhh--hhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHH
Confidence 00000 0000000 000001111235788899999999999999999999999999999999999999886 7 99999
Q ss_pred HHHHHHhhC
Q 038973 333 AIIRALLVR 341 (341)
Q Consensus 333 ~~i~~fl~~ 341 (341)
+.|.+|.++
T Consensus 470 ~~L~~F~~~ 478 (481)
T PLN03087 470 RELEEIWRR 478 (481)
T ss_pred HHHHHHhhc
Confidence 999999863
No 12
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=4.7e-34 Score=229.07 Aligned_cols=251 Identities=17% Similarity=0.123 Sum_probs=167.1
Q ss_pred EEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhC
Q 038973 50 HVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQ 129 (341)
Q Consensus 50 ~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~ 129 (341)
+++|+..++..+.++|+|||+||++++...|..++..|.+ +|+|+++|+||||.|.....++++++++|+.++++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l~ 79 (255)
T PRK10673 2 KLNIRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLARDLVN--DHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDALQ 79 (255)
T ss_pred cceeeeccCCCCCCCCCEEEECCCCCchhHHHHHHHHHhh--CCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 4677776554445789999999999999999999999876 68899999999999998778899999999999999999
Q ss_pred CCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhh
Q 038973 130 IGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMS 209 (341)
Q Consensus 130 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (341)
. ++++++||||||.+++.+|.++|++|+++|++++...... .......+.. +............ ..
T Consensus 80 ~-~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~----~~~~~~~~~~------~~~~~~~~~~~~~---~~ 145 (255)
T PRK10673 80 I-EKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYH----VRRHDEIFAA------INAVSEAGATTRQ---QA 145 (255)
T ss_pred C-CceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCcc----chhhHHHHHH------HHHhhhcccccHH---HH
Confidence 8 7899999999999999999999999999999986432110 0000000000 0000000000000 00
Q ss_pred cccccccccccccCCCCCCc-hHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEE
Q 038973 210 QKWFPTLSIMSGNMDIFSPP-DLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHI 288 (341)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvli 288 (341)
...+ ...+... .............. ... ......... .. .....++.+++|+|+
T Consensus 146 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~-~~--------~~~~~~~~~~~P~l~ 200 (255)
T PRK10673 146 AAIM---------RQHLNEEGVIQFLLKSFVDGEW----RFN---VPVLWDQYP-HI--------VGWEKIPAWPHPALF 200 (255)
T ss_pred HHHH---------HHhcCCHHHHHHHHhcCCccee----Eee---HHHHHHhHH-HH--------hCCcccCCCCCCeEE
Confidence 0000 0000000 00000000000000 000 000000000 00 011235678899999
Q ss_pred EEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhhC
Q 038973 289 WQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 289 i~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
|+|++|..++.+..+.+++.+|++++++++++||+++.+ |+++.+.|.+|++.
T Consensus 201 i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 201 IRGGNSPYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred EECCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999 99999999999863
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=2e-33 Score=228.46 Aligned_cols=264 Identities=18% Similarity=0.184 Sum_probs=172.3
Q ss_pred EccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC--CCCccchHHHH
Q 038973 44 KLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP--LRTVKTEACDV 121 (341)
Q Consensus 44 ~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~~dl 121 (341)
...+|.+++|...|+. .+++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+.+. .++++++++|+
T Consensus 11 ~~~~~~~~~~~~~g~~---~~~~vv~~hG~~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l 85 (278)
T TIGR03056 11 VTVGPFHWHVQDMGPT---AGPLLLLLHGTGASTHSWRDLMPPLAR--SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDL 85 (278)
T ss_pred eeECCEEEEEEecCCC---CCCeEEEEcCCCCCHHHHHHHHHHHhh--CcEEEeecCCCCCCCCCccccCCCHHHHHHHH
Confidence 3449999999998763 358999999999999999999999876 6899999999999998654 46999999999
Q ss_pred HHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhch
Q 038973 122 EQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFP 201 (341)
Q Consensus 122 ~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (341)
.+++++++. ++++++||||||.+++.++.++|++++++|++++...... +..... ...... ... ......
T Consensus 86 ~~~i~~~~~-~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~-~~~~~~-~~~~~~------~~~-~~~~~~ 155 (278)
T TIGR03056 86 SALCAAEGL-SPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFE-GMAGTL-FPYMAR------VLA-CNPFTP 155 (278)
T ss_pred HHHHHHcCC-CCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccc-cccccc-cchhhH------hhh-hcccch
Confidence 999999998 7999999999999999999999999999999988643110 000000 000000 000 000000
Q ss_pred hhhHHhhhc-ccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCC
Q 038973 202 WLLNLWMSQ-KWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFP 280 (341)
Q Consensus 202 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (341)
......... .... .................+......... ..........|.. ......++
T Consensus 156 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~--~~~~~~~~ 217 (278)
T TIGR03056 156 PMMSRGAADQQRVE--RLIRDTGSLLDKAGMTYYGRLIRSPAH--------------VDGALSMMAQWDL--APLNRDLP 217 (278)
T ss_pred HHHHhhcccCcchh--HHhhccccccccchhhHHHHhhcCchh--------------hhHHHHHhhcccc--cchhhhcc
Confidence 000000000 0000 000000000011111111110000000 0000011111211 12233467
Q ss_pred CCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhh
Q 038973 281 DNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLV 340 (341)
Q Consensus 281 ~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 340 (341)
++++|+++|+|++|..+|.+..+.+.+.++++++++++++||+++.| |+++.+.|.+|++
T Consensus 218 ~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 218 RITIPLHLIAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred cCCCCEEEEEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 88999999999999999999999999999999999999999999999 9999999999985
No 14
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=3.1e-34 Score=229.80 Aligned_cols=252 Identities=15% Similarity=0.174 Sum_probs=157.5
Q ss_pred EEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhC
Q 038973 50 HVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQ 129 (341)
Q Consensus 50 ~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~ 129 (341)
.++|...|.+ .|+|||+||+++++..|..+++.|.+ .|+|+++|+||||.|+....++++++++++. ++.
T Consensus 3 ~~~y~~~G~g----~~~ivllHG~~~~~~~w~~~~~~L~~--~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~----~~~ 72 (256)
T PRK10349 3 NIWWQTKGQG----NVHLVLLHGWGLNAEVWRCIDEELSS--HFTLHLVDLPGFGRSRGFGALSLADMAEAVL----QQA 72 (256)
T ss_pred ccchhhcCCC----CCeEEEECCCCCChhHHHHHHHHHhc--CCEEEEecCCCCCCCCCCCCCCHHHHHHHHH----hcC
Confidence 3677777753 35799999999999999999999976 5889999999999998655567666666654 356
Q ss_pred CCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhh
Q 038973 130 IGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMS 209 (341)
Q Consensus 130 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (341)
. ++++++||||||.+++.+|.++|++|+++|++++.................. ..+.............
T Consensus 73 ~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~---- 141 (256)
T PRK10349 73 P-DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVL------AGFQQQLSDDFQRTVE---- 141 (256)
T ss_pred C-CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHH------HHHHHHHHhchHHHHH----
Confidence 6 7999999999999999999999999999999988533210000000000000 0000000000000000
Q ss_pred cccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEE
Q 038973 210 QKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIW 289 (341)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii 289 (341)
.++.... ......................... ..+.... ... ...++...++++++||++|
T Consensus 142 -~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-~~~-----~~~~~~~~l~~i~~P~lii 202 (256)
T PRK10349 142 -RFLALQT---MGTETARQDARALKKTVLALPMPEV---------DVLNGGL-EIL-----KTVDLRQPLQNVSMPFLRL 202 (256)
T ss_pred -HHHHHHH---ccCchHHHHHHHHHHHhhccCCCcH---------HHHHHHH-HHH-----HhCccHHHHhhcCCCeEEE
Confidence 0000000 0000000000000111111110000 0000000 000 0013344577889999999
Q ss_pred EeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhhC
Q 038973 290 QGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 290 ~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
+|++|.++|.+.++.+.+.+|++++++++++||+++.| |+.|++.+.+|-.|
T Consensus 203 ~G~~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~ 255 (256)
T PRK10349 203 YGYLDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVALKQR 255 (256)
T ss_pred ecCCCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999 99999999998654
No 15
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=2e-33 Score=234.95 Aligned_cols=272 Identities=14% Similarity=0.147 Sum_probs=161.0
Q ss_pred cCCcEEEEEEccCCCC----CCCceEEEEcCCCCCCCcch--hhHHHHH-------HhcCceEEEEcCCCCCCCCCCC--
Q 038973 46 SDGRHVAYREAGVPKE----EANHKIIIIHGFGSSKDLNL--PVSQELI-------EELKIYFLSFDRPGYGESDPHP-- 110 (341)
Q Consensus 46 ~~g~~l~~~~~g~~~~----~~~~~vl~~hG~~~~~~~~~--~~~~~l~-------~~~~~~vi~~D~~G~G~S~~~~-- 110 (341)
.+|.+++|...|++.. ..+|+|||+||++++...|. .+...|. .+ +|+||++|+||||.|+.+.
T Consensus 47 ~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~-~~~Via~Dl~GhG~S~~p~~~ 125 (360)
T PRK06489 47 LPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDAS-KYFIILPDGIGHGKSSKPSDG 125 (360)
T ss_pred cCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCccccc-CCEEEEeCCCCCCCCCCCCcC
Confidence 4789999999986421 11589999999999988886 4444441 23 7999999999999998543
Q ss_pred ------CCCccchHHHHHHHH-HHhCCCCcEE-EEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhh
Q 038973 111 ------LRTVKTEACDVEQLA-DKLQIGSKFY-VIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREA 182 (341)
Q Consensus 111 ------~~~~~~~~~dl~~~l-~~l~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~ 182 (341)
.++++++++++.+++ +++++ ++++ ++||||||++++.+|.++|++|+++|++++.... .... . ..
T Consensus 126 ~~~~~~~~~~~~~a~~~~~~l~~~lgi-~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~----~~~~-~-~~ 198 (360)
T PRK06489 126 LRAAFPRYDYDDMVEAQYRLVTEGLGV-KHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTE----MSGR-N-WM 198 (360)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHhcCC-CceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCccc----ccHH-H-HH
Confidence 368889999988854 88998 7875 8999999999999999999999999999875310 0000 0 00
Q ss_pred hhcCcchhhhhHHHh----h--hch-hhhHHhhhcccc-cccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhH
Q 038973 183 LQRLPVENQRTFRIA----Y--YFP-WLLNLWMSQKWF-PTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIH 254 (341)
Q Consensus 183 ~~~~~~~~~~~~~~~----~--~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (341)
.... .......... . ..+ .....+....++ ....................+......... . ..
T Consensus 199 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~- 269 (360)
T PRK06489 199 WRRM-LIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVT----A---DA- 269 (360)
T ss_pred HHHH-HHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhh----c---CH-
Confidence 0000 0000000000 0 000 000000000000 000000000000000000111111100000 0 00
Q ss_pred HHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHH--HHHHhhCCCcEEEEecCC----CcccccC-
Q 038973 255 ESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQIN--QFISEKLPWIQYHEVPDA----GHLFIFE- 327 (341)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~--~~~~~~~~~~~~~~~~~~----gH~~~~e- 327 (341)
..+..... .. ...+....+.+|++|||+|+|++|.++|++.+ +.+++.+|++++++++++ ||+++ +
T Consensus 270 ~~~~~~~~-~~-----~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~ 342 (360)
T PRK06489 270 NDFLYQWD-SS-----RDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GS 342 (360)
T ss_pred HHHHHHHH-Hh-----hccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cC
Confidence 00000000 00 00123334778899999999999999998875 789999999999999996 99997 7
Q ss_pred HHHHHHHHHHHhhC
Q 038973 328 RKFCEAIIRALLVR 341 (341)
Q Consensus 328 p~~~~~~i~~fl~~ 341 (341)
|+++++.|.+|+++
T Consensus 343 P~~~~~~i~~FL~~ 356 (360)
T PRK06489 343 AKFWKAYLAEFLAQ 356 (360)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999963
No 16
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=3.3e-33 Score=227.48 Aligned_cols=257 Identities=19% Similarity=0.175 Sum_probs=160.4
Q ss_pred CcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhh---HHHHHHhcCceEEEEcCCCCCCCCCCCC--CCccchHHHHH
Q 038973 48 GRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPV---SQELIEELKIYFLSFDRPGYGESDPHPL--RTVKTEACDVE 122 (341)
Q Consensus 48 g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~---~~~l~~~~~~~vi~~D~~G~G~S~~~~~--~~~~~~~~dl~ 122 (341)
|.+++|...|. +++|||+||++.+...|..+ +..+.++ +|+|+++|+||||.|+.... .....+++|+.
T Consensus 19 ~~~~~y~~~g~-----~~~ivllHG~~~~~~~~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~ 92 (282)
T TIGR03343 19 NFRIHYNEAGN-----GEAVIMLHGGGPGAGGWSNYYRNIGPFVDA-GYRVILKDSPGFNKSDAVVMDEQRGLVNARAVK 92 (282)
T ss_pred ceeEEEEecCC-----CCeEEEECCCCCchhhHHHHHHHHHHHHhC-CCEEEEECCCCCCCCCCCcCcccccchhHHHHH
Confidence 56788988764 36899999999988888743 4455554 89999999999999986432 12225789999
Q ss_pred HHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchh
Q 038973 123 QLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPW 202 (341)
Q Consensus 123 ~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (341)
+++++++. ++++++||||||.+++.++.++|++|+++|++++..... ...... ...... ............
T Consensus 93 ~~l~~l~~-~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-~~~~~~-~~~~~~------~~~~~~~~~~~~ 163 (282)
T TIGR03343 93 GLMDALDI-EKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGP-SLFAPM-PMEGIK------LLFKLYAEPSYE 163 (282)
T ss_pred HHHHHcCC-CCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCc-cccccC-chHHHH------HHHHHhcCCCHH
Confidence 99999999 899999999999999999999999999999999753100 000000 000000 000000000000
Q ss_pred hhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCC
Q 038973 203 LLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDN 282 (341)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 282 (341)
..........+. ..... .+........... . ......... ..........+....++++
T Consensus 164 ~~~~~~~~~~~~--------~~~~~---~~~~~~~~~~~~~-----~-~~~~~~~~~----~~~~~~~~~~~~~~~l~~i 222 (282)
T TIGR03343 164 TLKQMLNVFLFD--------QSLIT---EELLQGRWENIQR-----Q-PEHLKNFLI----SSQKAPLSTWDVTARLGEI 222 (282)
T ss_pred HHHHHHhhCccC--------cccCc---HHHHHhHHHHhhc-----C-HHHHHHHHH----hccccccccchHHHHHhhC
Confidence 000000000000 00001 1111100000000 0 000000000 0000000111223346788
Q ss_pred CccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhh
Q 038973 283 EGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLV 340 (341)
Q Consensus 283 ~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 340 (341)
++|+++++|++|.++|++.++++++.+|++++++++++||+++.| |+.+.+.|.+|++
T Consensus 223 ~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 223 KAKTLVTWGRDDRFVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CCCEEEEEccCCCcCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 9999999999986
No 17
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=3.3e-33 Score=231.43 Aligned_cols=271 Identities=19% Similarity=0.154 Sum_probs=172.1
Q ss_pred CceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC-----CCCcc
Q 038973 41 PRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP-----LRTVK 115 (341)
Q Consensus 41 ~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~-----~~~~~ 115 (341)
......+|.+++|...|++ .+++|||+||++++...|+.++..|.+ +|+|+++|+||||.|+.+. .++++
T Consensus 107 ~~~~~~~~~~~~y~~~G~~---~~~~ivllHG~~~~~~~w~~~~~~L~~--~~~Via~DlpG~G~S~~p~~~~~~~ys~~ 181 (383)
T PLN03084 107 QSQASSDLFRWFCVESGSN---NNPPVLLIHGFPSQAYSYRKVLPVLSK--NYHAIAFDWLGFGFSDKPQPGYGFNYTLD 181 (383)
T ss_pred eeEEcCCceEEEEEecCCC---CCCeEEEECCCCCCHHHHHHHHHHHhc--CCEEEEECCCCCCCCCCCcccccccCCHH
Confidence 3344568999999999864 357999999999999999999998875 6999999999999998654 36999
Q ss_pred chHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHH
Q 038973 116 TEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFR 195 (341)
Q Consensus 116 ~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (341)
++++++.+++++++. ++++|+|||+||.+++.+|..+|++|+++|++++.........+.. ...+.. .....
T Consensus 182 ~~a~~l~~~i~~l~~-~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~--l~~~~~-----~l~~~ 253 (383)
T PLN03084 182 EYVSSLESLIDELKS-DKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPST--LSEFSN-----FLLGE 253 (383)
T ss_pred HHHHHHHHHHHHhCC-CCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHH--HHHHHH-----HHhhh
Confidence 999999999999999 7999999999999999999999999999999998642110000000 000000 00000
Q ss_pred HhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCC
Q 038973 196 IAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDL 275 (341)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (341)
.....+. . .....+. ..........+...+......... ...........+. .....+..+....
T Consensus 254 ~~~~~~~--~--~~~~~~~-----~~~~~~~~~e~~~~~~~~~~~~~~--~~~~l~~~~r~~~----~~l~~~~~~l~~~ 318 (383)
T PLN03084 254 IFSQDPL--R--ASDKALT-----SCGPYAMKEDDAMVYRRPYLTSGS--SGFALNAISRSMK----KELKKYIEEMRSI 318 (383)
T ss_pred hhhcchH--H--HHhhhhc-----ccCccCCCHHHHHHHhccccCCcc--hHHHHHHHHHHhh----cccchhhHHHHhh
Confidence 0000000 0 0000000 000011111111111111111000 0000000111111 0000000000000
Q ss_pred CCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhhC
Q 038973 276 INPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 276 ~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
. ...++++|+++|+|++|.+++.+..+.+++. +++++++++++||+++.| |+++++.|.+|+++
T Consensus 319 l-~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 319 L-TDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred h-ccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 0 0135788899999999999999988888887 589999999999999999 99999999999975
No 18
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=1.7e-33 Score=233.42 Aligned_cols=276 Identities=17% Similarity=0.139 Sum_probs=170.4
Q ss_pred CCCCCCCCCCCCceEccCCcEEEEEEccCCCC-CCCceEEEEcCCCCCCC-cchhhHHHHHHhcCceEEEEcCCCCCCCC
Q 038973 30 CGSPGGPPVTSPRIKLSDGRHVAYREAGVPKE-EANHKIIIIHGFGSSKD-LNLPVSQELIEELKIYFLSFDRPGYGESD 107 (341)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~g~~l~~~~~g~~~~-~~~~~vl~~hG~~~~~~-~~~~~~~~l~~~~~~~vi~~D~~G~G~S~ 107 (341)
.+.+.....+..+++..||.+++|+.++++.. ..+++|||+||++.+.. .|..+...|.++ ||+|+++|+||||.|+
T Consensus 24 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~-Gy~V~~~D~rGhG~S~ 102 (330)
T PLN02298 24 YYALKGIKGSKSFFTSPRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQM-GFACFALDLEGHGRSE 102 (330)
T ss_pred HhhccCCccccceEEcCCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHhC-CCEEEEecCCCCCCCC
Confidence 33444455677788888999999998876432 35678999999986643 455666777765 9999999999999997
Q ss_pred CCCC--CCccchHHHHHHHHHHhCC-----CCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchh
Q 038973 108 PHPL--RTVKTEACDVEQLADKLQI-----GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSR 180 (341)
Q Consensus 108 ~~~~--~~~~~~~~dl~~~l~~l~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~ 180 (341)
.... .+++.+++|+.++++.++. +.+++|+||||||.+++.++.++|++|+++|++++.........+.
T Consensus 103 ~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---- 178 (330)
T PLN02298 103 GLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPP---- 178 (330)
T ss_pred CccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCc----
Confidence 5443 3788899999999998753 1479999999999999999999999999999999865321100000
Q ss_pred hhhhcCcchhhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHH
Q 038973 181 EALQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRD 260 (341)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (341)
+ .............+.. ...+.... ............+.. ..+............. .+...
T Consensus 179 --~----~~~~~~~~~~~~~~~~-------~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~ 239 (330)
T PLN02298 179 --W----PIPQILTFVARFLPTL-------AIVPTADL---LEKSVKVPAKKIIAK--RNPMRYNGKPRLGTVV-ELLRV 239 (330)
T ss_pred --h----HHHHHHHHHHHHCCCC-------ccccCCCc---ccccccCHHHHHHHH--hCccccCCCccHHHHH-HHHHH
Confidence 0 0000000000000000 00000000 000000000011100 0110000000000000 00000
Q ss_pred HhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhC--CCcEEEEecCCCcccccC-HH----HHHH
Q 038973 261 LKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKL--PWIQYHEVPDAGHLFIFE-RK----FCEA 333 (341)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e-p~----~~~~ 333 (341)
.. .+...+.++++|+|+++|++|.++|++.++.+++.+ +++++++++|+||.++.+ |+ .+.+
T Consensus 240 ~~-----------~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~ 308 (330)
T PLN02298 240 TD-----------YLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRR 308 (330)
T ss_pred HH-----------HHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHH
Confidence 00 112236677888999999999999999999998887 478999999999999986 64 4666
Q ss_pred HHHHHhh
Q 038973 334 IIRALLV 340 (341)
Q Consensus 334 ~i~~fl~ 340 (341)
.+.+|++
T Consensus 309 ~i~~fl~ 315 (330)
T PLN02298 309 DILSWLN 315 (330)
T ss_pred HHHHHHH
Confidence 7777875
No 19
>PHA02857 monoglyceride lipase; Provisional
Probab=100.00 E-value=9.7e-33 Score=223.71 Aligned_cols=258 Identities=17% Similarity=0.153 Sum_probs=162.7
Q ss_pred ceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCC--CCccchHH
Q 038973 42 RIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPL--RTVKTEAC 119 (341)
Q Consensus 42 ~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~--~~~~~~~~ 119 (341)
.+...||.+++|+.+-++ +..++.|+++||+++++..|..+++.|.++ ||+|+++|+||||.|+.... .++.++++
T Consensus 4 ~~~~~~g~~l~~~~~~~~-~~~~~~v~llHG~~~~~~~~~~~~~~l~~~-g~~via~D~~G~G~S~~~~~~~~~~~~~~~ 81 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPI-TYPKALVFISHGAGEHSGRYEELAENISSL-GILVFSHDHIGHGRSNGEKMMIDDFGVYVR 81 (276)
T ss_pred eeecCCCCEEEEEeccCC-CCCCEEEEEeCCCccccchHHHHHHHHHhC-CCEEEEccCCCCCCCCCccCCcCCHHHHHH
Confidence 455669999999998654 345567777799999999999999999876 89999999999999975331 24455566
Q ss_pred HHHHHHHHhC---CCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHH
Q 038973 120 DVEQLADKLQ---IGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRI 196 (341)
Q Consensus 120 dl~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (341)
|+.+.++.+. ...+++++||||||.+++.+|.++|++++++|+++|.... .... ....+
T Consensus 82 d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~------~~~~------------~~~~~ 143 (276)
T PHA02857 82 DVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNA------EAVP------------RLNLL 143 (276)
T ss_pred HHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccc------cccc------------HHHHH
Confidence 6666665542 1258999999999999999999999999999999986421 0000 00000
Q ss_pred hhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCC
Q 038973 197 AYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLI 276 (341)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (341)
..... . .+.+.................+ ...+..++....... ...+...+... . .+..
T Consensus 144 ~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~-~----------~~~~ 202 (276)
T PHA02857 144 AAKLM---G-----IFYPNKIVGKLCPESVSRDMDE-VYKYQYDPLVNHEKI-KAGFASQVLKA-T----------NKVR 202 (276)
T ss_pred HHHHH---H-----HhCCCCccCCCCHhhccCCHHH-HHHHhcCCCccCCCc-cHHHHHHHHHH-H----------HHHH
Confidence 00000 0 0000000000001111111111 112222211100000 00000000000 0 0122
Q ss_pred CCCCCCCccEEEEEeecCCCCChHHHHHHHhhC-CCcEEEEecCCCcccccC-H---HHHHHHHHHHhh
Q 038973 277 NPFPDNEGSVHIWQGCEDRIIPSQINQFISEKL-PWIQYHEVPDAGHLFIFE-R---KFCEAIIRALLV 340 (341)
Q Consensus 277 ~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e-p---~~~~~~i~~fl~ 340 (341)
..++++++|+|+++|++|.++|++.++++.+.+ +++++++++++||.++.| + +++.+.+.+||+
T Consensus 203 ~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~ 271 (276)
T PHA02857 203 KIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWIF 271 (276)
T ss_pred HhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHHH
Confidence 336778889999999999999999999999887 578999999999999987 5 457777778875
No 20
>PRK10749 lysophospholipase L2; Provisional
Probab=100.00 E-value=1.1e-32 Score=227.78 Aligned_cols=273 Identities=15% Similarity=0.136 Sum_probs=169.1
Q ss_pred CCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC-------C
Q 038973 39 TSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP-------L 111 (341)
Q Consensus 39 ~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~-------~ 111 (341)
++.++...+|.+++|..++++ .++++||++||++++...|..++..+.++ ||+|+++|+||||.|+.+. .
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~--~~~~~vll~HG~~~~~~~y~~~~~~l~~~-g~~v~~~D~~G~G~S~~~~~~~~~~~~ 107 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAP--HHDRVVVICPGRIESYVKYAELAYDLFHL-GYDVLIIDHRGQGRSGRLLDDPHRGHV 107 (330)
T ss_pred cceEEEcCCCCEEEEEEccCC--CCCcEEEEECCccchHHHHHHHHHHHHHC-CCeEEEEcCCCCCCCCCCCCCCCcCcc
Confidence 345566679999999999764 34579999999999998999998888775 9999999999999997532 1
Q ss_pred CCccchHHHHHHHHHHh----CCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCc
Q 038973 112 RTVKTEACDVEQLADKL----QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLP 187 (341)
Q Consensus 112 ~~~~~~~~dl~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (341)
++++++++|+.++++++ +. .+++++||||||.+++.++.++|++++++|+++|....... .+.. ......
T Consensus 108 ~~~~~~~~d~~~~~~~~~~~~~~-~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~-~~~~-~~~~~~--- 181 (330)
T PRK10749 108 ERFNDYVDDLAAFWQQEIQPGPY-RKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLP-LPSW-MARRIL--- 181 (330)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCC-CCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCC-CCcH-HHHHHH---
Confidence 47889999999999887 55 69999999999999999999999999999999986431100 0000 000000
Q ss_pred chhhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCCch---HHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhc
Q 038973 188 VENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPD---LEILKKLSESPSEGQEKILQQGIHESLYRDLKTG 264 (341)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (341)
.+......... ........+... ........... ......+...+...............+.. ..
T Consensus 182 ---~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-- 249 (330)
T PRK10749 182 ---NWAEGHPRIRD--GYAIGTGRWRPL----PFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILA-GE-- 249 (330)
T ss_pred ---HHHHHhcCCCC--cCCCCCCCCCCC----CcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHH-HH--
Confidence 00000000000 000000001000 00001111111 11122222222110000000000111100 00
Q ss_pred ccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhC-------CCcEEEEecCCCcccccC-H---HHHHH
Q 038973 265 YAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKL-------PWIQYHEVPDAGHLFIFE-R---KFCEA 333 (341)
Q Consensus 265 ~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~-------~~~~~~~~~~~gH~~~~e-p---~~~~~ 333 (341)
.+...++++++|+|+|+|++|.+++++.++.+++.+ +++++++++|+||.++.| + +.+.+
T Consensus 250 ---------~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~ 320 (330)
T PRK10749 250 ---------QVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALN 320 (330)
T ss_pred ---------HHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHH
Confidence 111225667788999999999999999998888866 356899999999999987 5 45667
Q ss_pred HHHHHhhC
Q 038973 334 IIRALLVR 341 (341)
Q Consensus 334 ~i~~fl~~ 341 (341)
.|.+|+++
T Consensus 321 ~i~~fl~~ 328 (330)
T PRK10749 321 AIVDFFNR 328 (330)
T ss_pred HHHHHHhh
Confidence 77788763
No 21
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=1.7e-32 Score=220.53 Aligned_cols=253 Identities=18% Similarity=0.224 Sum_probs=164.7
Q ss_pred EEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCC--CCCCccchHHHHHHHHHHh
Q 038973 51 VAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPH--PLRTVKTEACDVEQLADKL 128 (341)
Q Consensus 51 l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~--~~~~~~~~~~dl~~~l~~l 128 (341)
++|...|++. .++|+||++||+++++..|..++..+.+ +|+|+++|+||||.|... ..++++++++++.++++++
T Consensus 1 ~~~~~~~~~~-~~~~~iv~lhG~~~~~~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~ 77 (257)
T TIGR03611 1 MHYELHGPPD-ADAPVVVLSSGLGGSGSYWAPQLDVLTQ--RFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL 77 (257)
T ss_pred CEEEEecCCC-CCCCEEEEEcCCCcchhHHHHHHHHHHh--ccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh
Confidence 4678887643 3568999999999999999998887765 699999999999999753 3468999999999999999
Q ss_pred CCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhh-chhhhHHh
Q 038973 129 QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYY-FPWLLNLW 207 (341)
Q Consensus 129 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 207 (341)
+. ++++++||||||.+++.++.++|++|+++|++++..... . .....+.. ........ .......
T Consensus 78 ~~-~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~-----~-~~~~~~~~------~~~~~~~~~~~~~~~~- 143 (257)
T TIGR03611 78 NI-ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPD-----P-HTRRCFDV------RIALLQHAGPEAYVHA- 143 (257)
T ss_pred CC-CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCC-----h-hHHHHHHH------HHHHHhccCcchhhhh-
Confidence 98 799999999999999999999999999999999754210 0 00000000 00000000 0000000
Q ss_pred hhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEE
Q 038973 208 MSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVH 287 (341)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvl 287 (341)
.....++.. ... .............. ..... ......... .. ...+....+.++++|++
T Consensus 144 ~~~~~~~~~-~~~---~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~-~~---------~~~~~~~~~~~i~~P~l 202 (257)
T TIGR03611 144 QALFLYPAD-WIS---ENAARLAADEAHAL-AHFPG------KANVLRRIN-AL---------EAFDVSARLDRIQHPVL 202 (257)
T ss_pred hhhhhcccc-Hhh---ccchhhhhhhhhcc-cccCc------cHHHHHHHH-HH---------HcCCcHHHhcccCccEE
Confidence 000000000 000 00000000000000 00000 000000000 00 00122334667888999
Q ss_pred EEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhhC
Q 038973 288 IWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 288 ii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
+++|++|.++|++.++.+.+.+++++++.++++||+++.+ |+++.+.|.+|++.
T Consensus 203 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 203 LIANRDDMLVPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred EEecCcCcccCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999998 99999999999974
No 22
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=7e-33 Score=230.53 Aligned_cols=279 Identities=16% Similarity=0.119 Sum_probs=160.8
Q ss_pred CCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhH---HHHHHhcCceEEEEcCCCCCCCCCCC----CCCccc---
Q 038973 47 DGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVS---QELIEELKIYFLSFDRPGYGESDPHP----LRTVKT--- 116 (341)
Q Consensus 47 ~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~---~~l~~~~~~~vi~~D~~G~G~S~~~~----~~~~~~--- 116 (341)
+|.+++|...|++.....|+||++||++++...|..++ +.|..+ +|+||++|+||||.|+.+. .+++++
T Consensus 24 ~~~~l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~ 102 (339)
T PRK07581 24 PDARLAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPE-KYFIIIPNMFGNGLSSSPSNTPAPFNAARFPH 102 (339)
T ss_pred CCceEEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcC-ceEEEEecCCCCCCCCCCCCCCCCCCCCCCCc
Confidence 67889999998743234467777788887777776543 345433 7999999999999997543 245444
Q ss_pred --hHHHHHH----HHHHhCCCCc-EEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccch-hhhhh----
Q 038973 117 --EACDVEQ----LADKLQIGSK-FYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLS-REALQ---- 184 (341)
Q Consensus 117 --~~~dl~~----~l~~l~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~-~~~~~---- 184 (341)
+++|+.+ +++++++ ++ ++|+||||||++|+.+|.++|++|+++|++++.... .+.... .....
T Consensus 103 ~~~~~~~~~~~~~l~~~lgi-~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~----~~~~~~~~~~~~~~l~ 177 (339)
T PRK07581 103 VTIYDNVRAQHRLLTEKFGI-ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKT----TPHNFVFLEGLKAALT 177 (339)
T ss_pred eeHHHHHHHHHHHHHHHhCC-CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCC----CHHHHHHHHHHHHHHH
Confidence 5777765 7788999 78 589999999999999999999999999999875421 000000 00000
Q ss_pred c-Ccchhhh-----hHHHhhhchhhhHHhhhcccccccccccccCCCCC-CchHHHHHHhhcCCCCchhHHhhhhhHHHH
Q 038973 185 R-LPVENQR-----TFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFS-PPDLEILKKLSESPSEGQEKILQQGIHESL 257 (341)
Q Consensus 185 ~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (341)
. ......+ ...............+...++..... .... ....+........................+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 252 (339)
T PRK07581 178 ADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELW-----RAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTW 252 (339)
T ss_pred hCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhc-----cccChhhHHHHHHHHHHHhhcccCcccHHHHHHHh
Confidence 0 0000000 00000000000000000011000000 0000 000111111110000000000000000000
Q ss_pred HHHHhhcccccccC--CCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecC-CCcccccC-HHHHHH
Q 038973 258 YRDLKTGYAKWEFD--PTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPD-AGHLFIFE-RKFCEA 333 (341)
Q Consensus 258 ~~~~~~~~~~~~~~--~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e-p~~~~~ 333 (341)
... ... ... ..++...+++|++|||+|+|++|..+|++..+.+++.+|+++++++++ +||+++.+ ++.+..
T Consensus 253 ~~~---~~~--~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~ 327 (339)
T PRK07581 253 QRG---DIS--RNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIA 327 (339)
T ss_pred hhc---ccc--cCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHH
Confidence 000 000 000 012334467889999999999999999999999999999999999999 99999999 999999
Q ss_pred HHHHHhhC
Q 038973 334 IIRALLVR 341 (341)
Q Consensus 334 ~i~~fl~~ 341 (341)
.|.+|+++
T Consensus 328 ~~~~~~~~ 335 (339)
T PRK07581 328 FIDAALKE 335 (339)
T ss_pred HHHHHHHH
Confidence 99999874
No 23
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=1.7e-32 Score=219.67 Aligned_cols=248 Identities=20% Similarity=0.289 Sum_probs=164.5
Q ss_pred EEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC-CCCccchHHHHHHHHHHhC
Q 038973 51 VAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP-LRTVKTEACDVEQLADKLQ 129 (341)
Q Consensus 51 l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~dl~~~l~~l~ 129 (341)
++|...|++ +.+|+||++||++.+...|.++++.|.+ +|+|+++|+||||.|+.+. .++++++++|+.++++.++
T Consensus 2 ~~~~~~g~~--~~~~~li~~hg~~~~~~~~~~~~~~l~~--~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~ 77 (251)
T TIGR02427 2 LHYRLDGAA--DGAPVLVFINSLGTDLRMWDPVLPALTP--DFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLG 77 (251)
T ss_pred ceEEeecCC--CCCCeEEEEcCcccchhhHHHHHHHhhc--ccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 678777754 2468999999999999999999888864 7999999999999997543 4689999999999999999
Q ss_pred CCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhh
Q 038973 130 IGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMS 209 (341)
Q Consensus 130 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (341)
. ++++++||||||.+++.+|.++|++|+++|++++...... + .......... .... .........
T Consensus 78 ~-~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~---~-~~~~~~~~~~-~~~~----~~~~~~~~~----- 142 (251)
T TIGR02427 78 I-ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGT---P-ESWNARIAAV-RAEG----LAALADAVL----- 142 (251)
T ss_pred C-CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCc---h-hhHHHHHhhh-hhcc----HHHHHHHHH-----
Confidence 8 7999999999999999999999999999999987532100 0 0000000000 0000 000000000
Q ss_pred cccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEE
Q 038973 210 QKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIW 289 (341)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii 289 (341)
..++.... ........+.+........ ... ........ ...+....+.++++|++++
T Consensus 143 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~---------~~~~~~~~~~~~~~Pvlii 199 (251)
T TIGR02427 143 ERWFTPGF------REAHPARLDLYRNMLVRQP-------PDG-YAGCCAAI---------RDADFRDRLGAIAVPTLCI 199 (251)
T ss_pred HHHccccc------ccCChHHHHHHHHHHHhcC-------HHH-HHHHHHHH---------hcccHHHHhhhcCCCeEEE
Confidence 01110000 0000001111111110000 000 00000000 0112333466788899999
Q ss_pred EeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhh
Q 038973 290 QGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLV 340 (341)
Q Consensus 290 ~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 340 (341)
+|++|.++|.+..+.+.+.+++.++++++++||+++.+ |+.+.+.+.+|++
T Consensus 200 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 200 AGDQDGSTPPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred EeccCCcCChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999 9999999999984
No 24
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=3.6e-32 Score=226.01 Aligned_cols=271 Identities=15% Similarity=0.075 Sum_probs=160.9
Q ss_pred CCCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCC------------cchhhHH---HHHHhcCceEEEEcCCC
Q 038973 38 VTSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKD------------LNLPVSQ---ELIEELKIYFLSFDRPG 102 (341)
Q Consensus 38 ~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~------------~~~~~~~---~l~~~~~~~vi~~D~~G 102 (341)
+.-....+ +|.+++|...|++ ++++||+||+.++.. .|.+++. .|..+ +|+||++|+||
T Consensus 36 ~~~~~~~~-~~~~l~y~~~G~~----~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~-~~~Vi~~Dl~G 109 (343)
T PRK08775 36 LSMRHAGL-EDLRLRYELIGPA----GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPA-RFRLLAFDFIG 109 (343)
T ss_pred eeecCCCC-CCceEEEEEeccC----CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCcc-ccEEEEEeCCC
Confidence 33333444 7889999999863 235777776666654 6887775 45333 68999999999
Q ss_pred CCCCCCCCCCCccchHHHHHHHHHHhCCCCc-EEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhh
Q 038973 103 YGESDPHPLRTVKTEACDVEQLADKLQIGSK-FYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSRE 181 (341)
Q Consensus 103 ~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~ 181 (341)
||.|. ...++.+++++|+.++++++++ ++ ++++||||||++++.+|.++|++|+++|++++.... .. ...
T Consensus 110 ~g~s~-~~~~~~~~~a~dl~~ll~~l~l-~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~-----~~--~~~ 180 (343)
T PRK08775 110 ADGSL-DVPIDTADQADAIALLLDALGI-ARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRA-----HP--YAA 180 (343)
T ss_pred CCCCC-CCCCCHHHHHHHHHHHHHHcCC-CcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccC-----CH--HHH
Confidence 99885 3457889999999999999998 55 579999999999999999999999999999986421 00 000
Q ss_pred hhhcCcch----------hhhhHHHhhhc--hhh-hHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHH
Q 038973 182 ALQRLPVE----------NQRTFRIAYYF--PWL-LNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKI 248 (341)
Q Consensus 182 ~~~~~~~~----------~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (341)
.+...... ........... ... ....+... +..... .............+....... ....
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~l~~~~~~~---~~~~ 254 (343)
T PRK08775 181 AWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEER-FDAPPE--VINGRVRVAAEDYLDAAGAQY---VART 254 (343)
T ss_pred HHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHH-hCCCcc--ccCCCccchHHHHHHHHHHHH---HHhc
Confidence 00000000 00000000000 000 00000000 000000 000000000010110000000 0000
Q ss_pred hhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhC-CCcEEEEecC-CCccccc
Q 038973 249 LQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKL-PWIQYHEVPD-AGHLFIF 326 (341)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~-~~~~~~~~~~-~gH~~~~ 326 (341)
.... ...+.... + .-...+++|++|+|+|+|++|.++|++..+++.+.+ |+++++++++ +||++++
T Consensus 255 ~~~~-~~~~~~~~---------~--~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~l 322 (343)
T PRK08775 255 PVNA-YLRLSESI---------D--LHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFL 322 (343)
T ss_pred ChhH-HHHHHHHH---------h--hcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHh
Confidence 0000 00000000 0 001225678889999999999999999999999988 7999999985 9999999
Q ss_pred C-HHHHHHHHHHHhhC
Q 038973 327 E-RKFCEAIIRALLVR 341 (341)
Q Consensus 327 e-p~~~~~~i~~fl~~ 341 (341)
| |++|++.|.+||++
T Consensus 323 E~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 323 KETDRIDAILTTALRS 338 (343)
T ss_pred cCHHHHHHHHHHHHHh
Confidence 9 99999999999963
No 25
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=100.00 E-value=4.1e-32 Score=226.45 Aligned_cols=285 Identities=16% Similarity=0.189 Sum_probs=162.7
Q ss_pred CCcEEEEEEccCCCCCCCceEEEEcCCCCCCC-----------cchhhHH---HHHHhcCceEEEEcCCC--CCCCCCC-
Q 038973 47 DGRHVAYREAGVPKEEANHKIIIIHGFGSSKD-----------LNLPVSQ---ELIEELKIYFLSFDRPG--YGESDPH- 109 (341)
Q Consensus 47 ~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~-----------~~~~~~~---~l~~~~~~~vi~~D~~G--~G~S~~~- 109 (341)
+|.+++|..+|+++...+++|||+||++++.. .|+.++. .|..+ +|+|+++|+|| ||.|.+.
T Consensus 14 ~~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~-~~~vi~~D~~G~~~g~s~~~~ 92 (351)
T TIGR01392 14 SDVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTD-RYFVVCSNVLGGCYGSTGPSS 92 (351)
T ss_pred CCceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCC-ceEEEEecCCCCCCCCCCCCC
Confidence 78899999999743334679999999999763 4776652 44344 79999999999 5665431
Q ss_pred ------------CCCCccchHHHHHHHHHHhCCCCc-EEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCc
Q 038973 110 ------------PLRTVKTEACDVEQLADKLQIGSK-FYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPA 176 (341)
Q Consensus 110 ------------~~~~~~~~~~dl~~~l~~l~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~ 176 (341)
..++++++++|+.++++++++ ++ ++++||||||++++.+|.++|++|+++|++++...........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~ 171 (351)
T TIGR01392 93 INPGGRPYGSDFPLITIRDDVKAQKLLLDHLGI-EQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAF 171 (351)
T ss_pred CCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCC-CCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHH
Confidence 136889999999999999999 67 9999999999999999999999999999999864311000000
Q ss_pred cch-hhhhhcCcc-h--h------h-hhHHHhhhchhhh--HHhhhcccccccccccccCCC--CCCchHHHHHHhhcCC
Q 038973 177 NLS-REALQRLPV-E--N------Q-RTFRIAYYFPWLL--NLWMSQKWFPTLSIMSGNMDI--FSPPDLEILKKLSESP 241 (341)
Q Consensus 177 ~~~-~~~~~~~~~-~--~------~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 241 (341)
... ......... . . . ............. ........+.........+.. ......+.+.......
T Consensus 172 ~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
T TIGR01392 172 NEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDK 251 (351)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHH
Confidence 000 000000000 0 0 0 0000000000000 000000000000000000000 0000000000000000
Q ss_pred CCchhHHhhhhhHHHHHHHHhhcccccccC--CCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEE----
Q 038973 242 SEGQEKILQQGIHESLYRDLKTGYAKWEFD--PTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYH---- 315 (341)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~---- 315 (341)
.. ............ .....+... ..++...+.+|++|+|+|+|++|.++|++.++.+++.+|+++++
T Consensus 252 ~~---~~~d~~~~~~~~----~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~ 324 (351)
T TIGR01392 252 FV---DRFDANSYLYLT----RALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYV 324 (351)
T ss_pred HH---hhcCcchHHHHH----HHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEE
Confidence 00 000000000000 001111000 01223457788999999999999999999999999999998765
Q ss_pred -EecCCCcccccC-HHHHHHHHHHHhh
Q 038973 316 -EVPDAGHLFIFE-RKFCEAIIRALLV 340 (341)
Q Consensus 316 -~~~~~gH~~~~e-p~~~~~~i~~fl~ 340 (341)
+++++||+++++ |+++++.|.+||+
T Consensus 325 ~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 325 EIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred EeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 567899999999 9999999999985
No 26
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=1.1e-31 Score=225.24 Aligned_cols=281 Identities=17% Similarity=0.151 Sum_probs=162.1
Q ss_pred CCcEEEEEEccCCCCCCCceEEEEcCCCCCCCc-------------chhhHH---HHHHhcCceEEEEcCCCC-CCCCCC
Q 038973 47 DGRHVAYREAGVPKEEANHKIIIIHGFGSSKDL-------------NLPVSQ---ELIEELKIYFLSFDRPGY-GESDPH 109 (341)
Q Consensus 47 ~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~-------------~~~~~~---~l~~~~~~~vi~~D~~G~-G~S~~~ 109 (341)
+|.+++|..+|.+++..+|+|||+||++++... |..++. .+..+ +|+||++|++|+ |.|+.+
T Consensus 31 ~~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~-~~~vi~~Dl~G~~~~s~~~ 109 (379)
T PRK00175 31 PPVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTD-RYFVICSNVLGGCKGSTGP 109 (379)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCcc-ceEEEeccCCCCCCCCCCC
Confidence 567789999997533346899999999999875 555542 33233 799999999983 444321
Q ss_pred ---------------CCCCccchHHHHHHHHHHhCCCCc-EEEEEeccChHHHHHHHhhccccccceeeecccccccCCC
Q 038973 110 ---------------PLRTVKTEACDVEQLADKLQIGSK-FYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPC 173 (341)
Q Consensus 110 ---------------~~~~~~~~~~dl~~~l~~l~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~ 173 (341)
+.++++++++++.++++++++ ++ ++++||||||.+++.+|.++|++|+++|++++........
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 188 (379)
T PRK00175 110 SSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGI-TRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQN 188 (379)
T ss_pred CCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCC-CCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHH
Confidence 146899999999999999999 67 5999999999999999999999999999999864311000
Q ss_pred CCccc-hhhhhhcCcc----------hhh-hhHHHhhhch--hhhHHhhhccccccccccccc-CCCCCCchHHH-HHH-
Q 038973 174 LPANL-SREALQRLPV----------ENQ-RTFRIAYYFP--WLLNLWMSQKWFPTLSIMSGN-MDIFSPPDLEI-LKK- 236 (341)
Q Consensus 174 ~~~~~-~~~~~~~~~~----------~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~- 236 (341)
..... .......... ... .......... ...........+......... .........+. ...
T Consensus 189 ~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~ 268 (379)
T PRK00175 189 IAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQ 268 (379)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHH
Confidence 00000 0000000000 000 0000000000 000000000011100000000 00000000000 000
Q ss_pred ---hhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCC---CCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCC
Q 038973 237 ---LSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDP---TDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLP 310 (341)
Q Consensus 237 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~ 310 (341)
...... ........... ..+.... .++...+.+|++|+|+|+|++|.++|++..+.+++.++
T Consensus 269 ~~~~~~~~d--------~~~~~~~~~~~----~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~ 336 (379)
T PRK00175 269 GDKFVERFD--------ANSYLYLTRAL----DYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALL 336 (379)
T ss_pred HHHHhhccC--------chHHHHHHHHH----HhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHH
Confidence 000000 00000000000 0000000 12334477889999999999999999999999999998
Q ss_pred Cc----EEEEec-CCCcccccC-HHHHHHHHHHHhhC
Q 038973 311 WI----QYHEVP-DAGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 311 ~~----~~~~~~-~~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
++ ++++++ ++||++++| |+++++.|.+||++
T Consensus 337 ~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~ 373 (379)
T PRK00175 337 AAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLER 373 (379)
T ss_pred hcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHh
Confidence 87 777775 899999999 99999999999964
No 27
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=100.00 E-value=7.6e-31 Score=200.00 Aligned_cols=271 Identities=19% Similarity=0.143 Sum_probs=194.0
Q ss_pred CCCCCCCCceEccCCcEEEEEEccCCC-CCCCceEEEEcCCCCCC-CcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCC
Q 038973 34 GGPPVTSPRIKLSDGRHVAYREAGVPK-EEANHKIIIIHGFGSSK-DLNLPVSQELIEELKIYFLSFDRPGYGESDPHPL 111 (341)
Q Consensus 34 ~~~~~~~~~~~~~~g~~l~~~~~g~~~-~~~~~~vl~~hG~~~~~-~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~ 111 (341)
........+++..+|.++.+..|-+.. .+.+..|+++||+++.. ..|..++..|+.. ||.|+++|++|||.|++...
T Consensus 23 ~~~~~~~~~~~n~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~-g~~v~a~D~~GhG~SdGl~~ 101 (313)
T KOG1455|consen 23 GGVTYSESFFTNPRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKS-GFAVYAIDYEGHGRSDGLHA 101 (313)
T ss_pred CccceeeeeEEcCCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhC-CCeEEEeeccCCCcCCCCcc
Confidence 344567788999999999999997643 25567899999999875 7777888888876 99999999999999997666
Q ss_pred C--CccchHHHHHHHHHHhC-----CCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhh
Q 038973 112 R--TVKTEACDVEQLADKLQ-----IGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQ 184 (341)
Q Consensus 112 ~--~~~~~~~dl~~~l~~l~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~ 184 (341)
| +++..++|+....+... .+.+..++||||||.+++.++.++|+..+++|+++|.+.......|....
T Consensus 102 yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v----- 176 (313)
T KOG1455|consen 102 YVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPV----- 176 (313)
T ss_pred cCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHH-----
Confidence 5 89999999999988642 23689999999999999999999999999999999987531111111000
Q ss_pred cCcchhhhhHHHhhhchhhhHHhhhccccccccccccc-CCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhh
Q 038973 185 RLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGN-MDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKT 263 (341)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (341)
......+. .+.|........ .......+++.......++.............+.++...
T Consensus 177 -----~~~l~~l~-------------~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~-- 236 (313)
T KOG1455|consen 177 -----ISILTLLS-------------KLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTA-- 236 (313)
T ss_pred -----HHHHHHHH-------------HhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHH--
Confidence 01111111 222222211111 122233455666666666666555545555555444332
Q ss_pred cccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhC--CCcEEEEecCCCccccc-C----HHHHHHHHH
Q 038973 264 GYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKL--PWIQYHEVPDAGHLFIF-E----RKFCEAIIR 336 (341)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~gH~~~~-e----p~~~~~~i~ 336 (341)
++...++++++|++++||++|.++.++.++.+.+.. .+.++.+|||.-|.++. | -+.+..-|.
T Consensus 237 ----------~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~ 306 (313)
T KOG1455|consen 237 ----------DLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDII 306 (313)
T ss_pred ----------HHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHH
Confidence 345557889999999999999999999999999988 46899999999998885 4 344556666
Q ss_pred HHhh
Q 038973 337 ALLV 340 (341)
Q Consensus 337 ~fl~ 340 (341)
+||+
T Consensus 307 ~Wl~ 310 (313)
T KOG1455|consen 307 SWLD 310 (313)
T ss_pred HHHH
Confidence 7765
No 28
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=100.00 E-value=2.1e-31 Score=212.48 Aligned_cols=240 Identities=17% Similarity=0.197 Sum_probs=150.5
Q ss_pred CceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccCh
Q 038973 64 NHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGA 143 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg 143 (341)
+++|||+||++++...|..+++.|.+ +|+|+++|+||||.|+....++++++++++.+.+ . ++++++||||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~--~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~----~-~~~~lvG~S~Gg 76 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA--HFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQA----P-DPAIWLGWSLGG 76 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc--CeEEEEecCCcCccCCCCCCcCHHHHHHHHHHhC----C-CCeEEEEEcHHH
Confidence 37899999999999999999998875 6899999999999998766667777777765543 2 699999999999
Q ss_pred HHHHHHHhhccccccceeeecccccccCC-CCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhhccccccccccccc
Q 038973 144 YPVYGCLKYIPQRLAGASLVVPFVHYWWP-CLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGN 222 (341)
Q Consensus 144 ~~a~~~a~~~p~~v~~~il~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (341)
.+++.++.++|++++++|++++....... .++......... .+..............+.....+
T Consensus 77 ~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~--------- 141 (245)
T TIGR01738 77 LVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLT------GFQQQLSDDYQRTIERFLALQTL--------- 141 (245)
T ss_pred HHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHH------HHHHHhhhhHHHHHHHHHHHHHh---------
Confidence 99999999999999999999886432110 000000000000 00000000000000000000000
Q ss_pred CCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHH
Q 038973 223 MDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQIN 302 (341)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~ 302 (341)
...........+................ .....+ ...+....+.++++|+++++|++|.++|.+..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~ 207 (245)
T TIGR01738 142 GTPTARQDARALKQTLLARPTPNVQVLQ-AGLEIL-------------ATVDLRQPLQNISVPFLRLYGYLDGLVPAKVV 207 (245)
T ss_pred cCCccchHHHHHHHHhhccCCCCHHHHH-HHHHHh-------------hcccHHHHHhcCCCCEEEEeecCCcccCHHHH
Confidence 0000111111111111110000000000 000000 00122334667888999999999999999999
Q ss_pred HHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHh
Q 038973 303 QFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALL 339 (341)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl 339 (341)
+.+.+.+|++++++++++||+++.| |+++++.|.+|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 208 PYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred HHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 9999999999999999999999999 999999999985
No 29
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=6.7e-32 Score=218.79 Aligned_cols=283 Identities=21% Similarity=0.222 Sum_probs=171.0
Q ss_pred CCCCCceEccCCc-EEEEEEccCC------CCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCC-C
Q 038973 37 PVTSPRIKLSDGR-HVAYREAGVP------KEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESD-P 108 (341)
Q Consensus 37 ~~~~~~~~~~~g~-~l~~~~~g~~------~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~-~ 108 (341)
......+....|. .+.....|.. .+..+++||++|||+++...|+.++..|.+..|+.|+++|++|+|.++ .
T Consensus 24 ~~~~~~i~~~~g~~~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~ 103 (326)
T KOG1454|consen 24 TLRSTSIEIPWGPLTIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPL 103 (326)
T ss_pred cccceEEEcccCCceeEEEEeccceeccCCCCCCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCC
Confidence 3455556665663 5666555543 113679999999999999999999999998877999999999999554 3
Q ss_pred CC--CCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhcccccccee---eecccccccCCCCCccchhhhh
Q 038973 109 HP--LRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGAS---LVVPFVHYWWPCLPANLSREAL 183 (341)
Q Consensus 109 ~~--~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~i---l~~~~~~~~~~~~~~~~~~~~~ 183 (341)
+. .|+..++++.+..+....+. .+++++|||+||.+|+.+|+.+|+.|++++ ++++....... .........
T Consensus 104 ~~~~~y~~~~~v~~i~~~~~~~~~-~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~--~~~~~~~~~ 180 (326)
T KOG1454|consen 104 PRGPLYTLRELVELIRRFVKEVFV-EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPK--GIKGLRRLL 180 (326)
T ss_pred CCCCceehhHHHHHHHHHHHhhcC-cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCc--chhHHHHhh
Confidence 22 47899999999999999988 789999999999999999999999999999 44444321000 000000000
Q ss_pred hcCcchhh-hhHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHh
Q 038973 184 QRLPVENQ-RTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLK 262 (341)
Q Consensus 184 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (341)
........ +............ ........... ........+.......... .....++..
T Consensus 181 ~~~~~~~~~~~p~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 241 (326)
T KOG1454|consen 181 DKFLSALELLIPLSLTEPVRLV----SEGLLRCLKVV----YTDPSRLLEKLLHLLSRPV-----------KEHFHRDAR 241 (326)
T ss_pred hhhccHhhhcCccccccchhhe----eHhhhcceeee----ccccccchhhhhhheeccc-----------ccchhhhhe
Confidence 00000000 0000000000000 00000000000 0000000111111100000 000000000
Q ss_pred hcc-cccccCCCCCCCCCCCCC-ccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHh
Q 038973 263 TGY-AKWEFDPTDLINPFPDNE-GSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALL 339 (341)
Q Consensus 263 ~~~-~~~~~~~~~~~~~~~~i~-~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl 339 (341)
..+ .............++++. ||+|+++|++|+++|.+.++.+.+.+|++++++++++||.++.| |+++++.|..|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi 321 (326)
T KOG1454|consen 242 LSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFI 321 (326)
T ss_pred eeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHH
Confidence 000 000000011122345666 99999999999999999999999999999999999999999999 999999999998
Q ss_pred hC
Q 038973 340 VR 341 (341)
Q Consensus 340 ~~ 341 (341)
.+
T Consensus 322 ~~ 323 (326)
T KOG1454|consen 322 AR 323 (326)
T ss_pred HH
Confidence 63
No 30
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.98 E-value=2.1e-31 Score=211.94 Aligned_cols=237 Identities=17% Similarity=0.134 Sum_probs=147.5
Q ss_pred CceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccCh
Q 038973 64 NHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGA 143 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg 143 (341)
+|+|||+||++++...|..+++.| + +|+|+++|+||||.|+.+...+++++++|+.+++++++. ++++++||||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvG~S~Gg 77 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P--DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSYNI-LPYWLVGYSLGG 77 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C--CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHcCC-CCeEEEEECHHH
Confidence 468999999999999999999987 3 588999999999999877667999999999999999998 899999999999
Q ss_pred HHHHHHHhhcccc-ccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhh-hchhhhHHhhhcccccccccccc
Q 038973 144 YPVYGCLKYIPQR-LAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAY-YFPWLLNLWMSQKWFPTLSIMSG 221 (341)
Q Consensus 144 ~~a~~~a~~~p~~-v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 221 (341)
.+++.+|.++|+. |++++++++... ...... ..........+...... ........++....+
T Consensus 78 ~va~~~a~~~~~~~v~~lvl~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 142 (242)
T PRK11126 78 RIAMYYACQGLAGGLCGLIVEGGNPG-----LQNAEE--RQARWQNDRQWAQRFRQEPLEQVLADWYQQPVF-------- 142 (242)
T ss_pred HHHHHHHHhCCcccccEEEEeCCCCC-----CCCHHH--HHHHHhhhHHHHHHhccCcHHHHHHHHHhcchh--------
Confidence 9999999999664 999999886532 111100 00000000011100000 000000000000000
Q ss_pred cCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHH
Q 038973 222 NMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQI 301 (341)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~ 301 (341)
................. . . ... ...+..... . ....+....+.+++||+++|+|++|..+.
T Consensus 143 --~~~~~~~~~~~~~~~~~--~-~----~~~-~~~~~~~~~-----~-~~~~~~~~~l~~i~~P~lii~G~~D~~~~--- 203 (242)
T PRK11126 143 --ASLNAEQRQQLVAKRSN--N-N----GAA-VAAMLEATS-----L-AKQPDLRPALQALTFPFYYLCGERDSKFQ--- 203 (242)
T ss_pred --hccCccHHHHHHHhccc--C-C----HHH-HHHHHHhcC-----c-ccCCcHHHHhhccCCCeEEEEeCCcchHH---
Confidence 00111111111000000 0 0 000 000000000 0 00112333467889999999999998652
Q ss_pred HHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhhC
Q 038973 302 NQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
.+++. +++++++++++||+++.| |+++++.|.+|+++
T Consensus 204 --~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 204 --ALAQQ-LALPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred --HHHHH-hcCeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 23333 389999999999999999 99999999999864
No 31
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.98 E-value=2e-30 Score=208.28 Aligned_cols=267 Identities=19% Similarity=0.219 Sum_probs=185.6
Q ss_pred CCCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCC-CCCC--CCc
Q 038973 38 VTSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESD-PHPL--RTV 114 (341)
Q Consensus 38 ~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~-~~~~--~~~ 114 (341)
..+..+...||..++|..+-... +.+.+||++||++.+...|..++..|... ||.|+++|+||||.|. .... .++
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~-~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~-G~~V~~~D~RGhG~S~r~~rg~~~~f 86 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPE-PPKGVVVLVHGLGEHSGRYEELADDLAAR-GFDVYALDLRGHGRSPRGQRGHVDSF 86 (298)
T ss_pred cccceeecCCCceEEEEeecCCC-CCCcEEEEecCchHHHHHHHHHHHHHHhC-CCEEEEecCCCCCCCCCCCcCCchhH
Confidence 35667778899999999996543 23379999999999999999999999987 9999999999999997 3332 268
Q ss_pred cchHHHHHHHHHHhC---CCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhh
Q 038973 115 KTEACDVEQLADKLQ---IGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQ 191 (341)
Q Consensus 115 ~~~~~dl~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (341)
+++.+|+..+++... .+.+++++||||||.|++.++.+++.+|+++|+.+|..... .......
T Consensus 87 ~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~-----~~~~~~~--------- 152 (298)
T COG2267 87 ADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLG-----GAILRLI--------- 152 (298)
T ss_pred HHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCC-----hhHHHHH---------
Confidence 999999999998874 34799999999999999999999999999999999986421 1000000
Q ss_pred hhHHHhhhchhhhHHhhhccccccccccc----ccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccc
Q 038973 192 RTFRIAYYFPWLLNLWMSQKWFPTLSIMS----GNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAK 267 (341)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (341)
....... ...++.+...... .........+.+..+.+..++...............+....
T Consensus 153 ~~~~~~~---------~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~------ 217 (298)
T COG2267 153 LARLALK---------LLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGR------ 217 (298)
T ss_pred HHHHhcc---------cccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhc------
Confidence 0000000 0111112111111 12223334566777777777754333222222222111100
Q ss_pred cccCCCCCCCCCCCCCccEEEEEeecCCCCC-hHHHHHHHhhC--CCcEEEEecCCCcccccC--H--HHHHHHHHHHhh
Q 038973 268 WEFDPTDLINPFPDNEGSVHIWQGCEDRIIP-SQINQFISEKL--PWIQYHEVPDAGHLFIFE--R--KFCEAIIRALLV 340 (341)
Q Consensus 268 ~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p-~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e--p--~~~~~~i~~fl~ 340 (341)
.........+++|+|+++|++|.+++ .+...++.+.. ++.++++++|+.|.++.| . +++.+.+.+|+.
T Consensus 218 -----~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~ 292 (298)
T COG2267 218 -----VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLA 292 (298)
T ss_pred -----ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHH
Confidence 01223356678889999999999999 67777776665 678999999999999998 5 778888888875
No 32
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.98 E-value=2.6e-30 Score=207.30 Aligned_cols=259 Identities=13% Similarity=0.100 Sum_probs=161.8
Q ss_pred cCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC--CCCccchHHHHHH
Q 038973 46 SDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP--LRTVKTEACDVEQ 123 (341)
Q Consensus 46 ~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~~dl~~ 123 (341)
.+|.+++|..-+ .++|+|||+||++.+...|.++...|.++ ||+|+++|+||||.|.... .++++++++++.+
T Consensus 4 ~~~~~~~~~~~~----~~~p~vvliHG~~~~~~~w~~~~~~L~~~-g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~ 78 (273)
T PLN02211 4 ENGEEVTDMKPN----RQPPHFVLIHGISGGSWCWYKIRCLMENS-GYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLID 78 (273)
T ss_pred cccccccccccc----CCCCeEEEECCCCCCcCcHHHHHHHHHhC-CCEEEEecccCCCCCCCCcccCCCHHHHHHHHHH
Confidence 378888887721 24689999999999999999999988765 8999999999999886433 3699999999999
Q ss_pred HHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccc-hhhhhhcCcchhhhhHHHhhhchh
Q 038973 124 LADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANL-SREALQRLPVENQRTFRIAYYFPW 202 (341)
Q Consensus 124 ~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 202 (341)
++++++..++++++||||||.+++.++.++|++|+++|++++... .... ....+... .+.
T Consensus 79 ~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~------~~g~~~~~~~~~~-------------~~~ 139 (273)
T PLN02211 79 FLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATML------KLGFQTDEDMKDG-------------VPD 139 (273)
T ss_pred HHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccC------CCCCCHHHHHhcc-------------ccc
Confidence 999985337999999999999999999999999999999987532 0000 00000000 000
Q ss_pred hhHHhhhcccccc-cccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCC
Q 038973 203 LLNLWMSQKWFPT-LSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPD 281 (341)
Q Consensus 203 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (341)
+... ...+.. ................+....+...... ..... .............+ ...........
T Consensus 140 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~ 208 (273)
T PLN02211 140 LSEF---GDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMSP-QEDST--LAAMLLRPGPILAL-----RSARFEEETGD 208 (273)
T ss_pred hhhh---ccceeeeeccCCCCCCceeeeCHHHHHHHHhcCCC-HHHHH--HHHHhcCCcCcccc-----ccccccccccc
Confidence 0000 000000 0000000000000011111111110000 00000 00000000000000 00011111334
Q ss_pred C-CccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhh
Q 038973 282 N-EGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLV 340 (341)
Q Consensus 282 i-~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 340 (341)
+ ++|+++|.|++|..+|++..+.+++.+++++++.++ +||.++++ |+++.++|.++..
T Consensus 209 ~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~ 268 (273)
T PLN02211 209 IDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIKAAA 268 (273)
T ss_pred cCccceEEEEeCCCCCCCHHHHHHHHHhCCccEEEEEC-CCCCccccCHHHHHHHHHHHHH
Confidence 4 788999999999999999999999999999999997 89999999 9999999988754
No 33
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.98 E-value=1.8e-30 Score=212.30 Aligned_cols=264 Identities=18% Similarity=0.235 Sum_probs=160.3
Q ss_pred cCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC--C--CCccchHHHH
Q 038973 46 SDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP--L--RTVKTEACDV 121 (341)
Q Consensus 46 ~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~--~--~~~~~~~~dl 121 (341)
.+|.++.|...+.. ..+++|||+||++++...|......+.++.||+|+++|+||||.|..+. . ++++++++|+
T Consensus 9 ~~~~~~~~~~~~~~--~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~ 86 (288)
T TIGR01250 9 VDGGYHLFTKTGGE--GEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDEL 86 (288)
T ss_pred CCCCeEEEEeccCC--CCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHH
Confidence 36777888887653 2358999999987766555544455555448999999999999998543 2 6889999999
Q ss_pred HHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccch-hhhhhcCcchhhhhHHHhhhc
Q 038973 122 EQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLS-REALQRLPVENQRTFRIAYYF 200 (341)
Q Consensus 122 ~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 200 (341)
.+++++++. ++++++||||||.+++.++.++|++++++|++++... .+.... .......... .......
T Consensus 87 ~~~~~~~~~-~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~--- 156 (288)
T TIGR01250 87 EEVREKLGL-DKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDS-----APEYVKELNRLRKELPP-EVRAAIK--- 156 (288)
T ss_pred HHHHHHcCC-CcEEEEEeehHHHHHHHHHHhCccccceeeEeccccc-----chHHHHHHHHHHhhcCh-hHHHHHH---
Confidence 999999998 7899999999999999999999999999999987532 010000 0000000000 0000000
Q ss_pred hhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhc----CCCCchhH--HhhhhhHHHHHHHHhhccccc----cc
Q 038973 201 PWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSE----SPSEGQEK--ILQQGIHESLYRDLKTGYAKW----EF 270 (341)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~ 270 (341)
.... .................. ........ ............... ....+ ..
T Consensus 157 ----------~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 218 (288)
T TIGR01250 157 ----------RCEA-------SGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQ-GPNEFTITGNL 218 (288)
T ss_pred ----------HHHh-------ccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhccc-CCccccccccc
Confidence 0000 000000000001100000 00000000 000000000000000 00000 00
Q ss_pred CCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhh
Q 038973 271 DPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLV 340 (341)
Q Consensus 271 ~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 340 (341)
...++...+.+++||+++++|++|.+ +++..+.+.+.++++++++++++||+++.+ |+++.+.|.+|++
T Consensus 219 ~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 219 KDWDITDKLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred cccCHHHHhhccCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 01123334677899999999999985 567888999999999999999999999999 9999999999985
No 34
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.97 E-value=5.2e-30 Score=213.87 Aligned_cols=258 Identities=19% Similarity=0.155 Sum_probs=166.8
Q ss_pred ceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCC--CCccchHH
Q 038973 42 RIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPL--RTVKTEAC 119 (341)
Q Consensus 42 ~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~--~~~~~~~~ 119 (341)
.+...+|..++|..|.+..++.+++||++||++++...|..++..|.++ ||+|+++|+||||.|+.... .+++.+.+
T Consensus 114 ~~~~~~~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~-Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~ 192 (395)
T PLN02652 114 LFYGARRNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAKQLTSC-GFGVYAMDWIGHGGSDGLHGYVPSLDYVVE 192 (395)
T ss_pred EEECCCCCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHHHHHHC-CCEEEEeCCCCCCCCCCCCCCCcCHHHHHH
Confidence 3444566778888887754456789999999999999999999999876 99999999999999986543 37788899
Q ss_pred HHHHHHHHhCC---CCcEEEEEeccChHHHHHHHhhccc---cccceeeecccccccCCCCCccchhhhhhcCcchhhhh
Q 038973 120 DVEQLADKLQI---GSKFYVIGISMGAYPVYGCLKYIPQ---RLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRT 193 (341)
Q Consensus 120 dl~~~l~~l~~---~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (341)
|+.++++.+.. +.+++++||||||.+++.++. +|+ +++++|+.+|.... .... . ..
T Consensus 193 Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~-----~~~~---~---------~~ 254 (395)
T PLN02652 193 DTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRV-----KPAH---P---------IV 254 (395)
T ss_pred HHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECccccc-----ccch---H---------HH
Confidence 99999998753 247999999999999998764 564 89999999886421 0000 0 00
Q ss_pred HHHhhhchhhhHHhhhcccccccccccccC--CCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccC
Q 038973 194 FRIAYYFPWLLNLWMSQKWFPTLSIMSGNM--DIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFD 271 (341)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (341)
.... .+.. ...+......... ..... +.+.......++............. .+.... .
T Consensus 255 ~~~~----~l~~-----~~~p~~~~~~~~~~~~~~s~-~~~~~~~~~~dp~~~~g~i~~~~~~-~~~~~~-~-------- 314 (395)
T PLN02652 255 GAVA----PIFS-----LVAPRFQFKGANKRGIPVSR-DPAALLAKYSDPLVYTGPIRVRTGH-EILRIS-S-------- 314 (395)
T ss_pred HHHH----HHHH-----HhCCCCcccCcccccCCcCC-CHHHHHHHhcCCCcccCCchHHHHH-HHHHHH-H--------
Confidence 0000 0000 0111110100000 01111 1222222222222111000000000 000000 0
Q ss_pred CCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCC--CcEEEEecCCCcccccC--HHHHHHHHHHHhh
Q 038973 272 PTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLP--WIQYHEVPDAGHLFIFE--RKFCEAIIRALLV 340 (341)
Q Consensus 272 ~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e--p~~~~~~i~~fl~ 340 (341)
.+...+.++++|+|+++|++|.++|++.++++++.++ +.++++++|++|.++.| ++++.+.+.+|++
T Consensus 315 --~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~ 385 (395)
T PLN02652 315 --YLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWME 385 (395)
T ss_pred --HHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHH
Confidence 1223366788889999999999999999999988864 47899999999999776 8999999999986
No 35
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.97 E-value=1.4e-30 Score=202.39 Aligned_cols=129 Identities=20% Similarity=0.331 Sum_probs=107.5
Q ss_pred CCCCCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC-----
Q 038973 36 PPVTSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP----- 110 (341)
Q Consensus 36 ~~~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~----- 110 (341)
.+....++.+.++..+....... ....++++|++||+|.+...|..-++.|++ .+.|+++|++|+|.|+.+.
T Consensus 63 v~~~~~~v~i~~~~~iw~~~~~~-~~~~~~plVliHGyGAg~g~f~~Nf~~La~--~~~vyaiDllG~G~SSRP~F~~d~ 139 (365)
T KOG4409|consen 63 VPYSKKYVRIPNGIEIWTITVSN-ESANKTPLVLIHGYGAGLGLFFRNFDDLAK--IRNVYAIDLLGFGRSSRPKFSIDP 139 (365)
T ss_pred CCcceeeeecCCCceeEEEeecc-cccCCCcEEEEeccchhHHHHHHhhhhhhh--cCceEEecccCCCCCCCCCCCCCc
Confidence 33455556666666666655533 335778999999999999999999999998 4669999999999999765
Q ss_pred CCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 111 LRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 111 ~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
......+++-|+++....++ .+.+|+|||+||.++..||.+||++|+.+||++|...
T Consensus 140 ~~~e~~fvesiE~WR~~~~L-~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf 196 (365)
T KOG4409|consen 140 TTAEKEFVESIEQWRKKMGL-EKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGF 196 (365)
T ss_pred ccchHHHHHHHHHHHHHcCC-cceeEeeccchHHHHHHHHHhChHhhceEEEeccccc
Confidence 12455788999999999999 8999999999999999999999999999999999764
No 36
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.97 E-value=4.4e-30 Score=210.45 Aligned_cols=123 Identities=26% Similarity=0.382 Sum_probs=102.4
Q ss_pred CCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC---CCCcc
Q 038973 39 TSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP---LRTVK 115 (341)
Q Consensus 39 ~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~---~~~~~ 115 (341)
.+.++...+|.+++|...|++ ++++|||+||++++...+ .+...+..+ +|+|+++|+||||.|+.+. .++.+
T Consensus 5 ~~~~~~~~~~~~l~y~~~g~~---~~~~lvllHG~~~~~~~~-~~~~~~~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~ 79 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSGNP---DGKPVVFLHGGPGSGTDP-GCRRFFDPE-TYRIVLFDQRGCGKSTPHACLEENTTW 79 (306)
T ss_pred cCCeEEcCCCcEEEEEECcCC---CCCEEEEECCCCCCCCCH-HHHhccCcc-CCEEEEECCCCCCCCCCCCCcccCCHH
Confidence 557888889999999998864 346899999988776543 233334333 7999999999999998653 24678
Q ss_pred chHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 116 TEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 116 ~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
++++|+..++++++. ++++++||||||.+++.++.++|++|+++|++++..
T Consensus 80 ~~~~dl~~l~~~l~~-~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 80 DLVADIEKLREKLGI-KNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHHHHcCC-CCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 899999999999998 799999999999999999999999999999998864
No 37
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=4.3e-30 Score=202.57 Aligned_cols=224 Identities=27% Similarity=0.387 Sum_probs=146.4
Q ss_pred EEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC---CCCccchHHHHHHHHHHhCCCCcEEEEEeccCh
Q 038973 67 IIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP---LRTVKTEACDVEQLADKLQIGSKFYVIGISMGA 143 (341)
Q Consensus 67 vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~---~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg 143 (341)
|||+||++++...|..+++.|. + ||+|+++|+||+|.|+.+. .++++++++|+.++++.++. ++++++|||+||
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~-~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~lvG~S~Gg 77 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-R-GYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGI-KKVILVGHSMGG 77 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-T-TSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTT-SSEEEEEETHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-C-CCEEEEEecCCccccccccccCCcchhhhhhhhhhccccccc-cccccccccccc
Confidence 7999999999999999999995 4 8999999999999998654 46899999999999999998 799999999999
Q ss_pred HHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhhcccccccccccccC
Q 038973 144 YPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNM 223 (341)
Q Consensus 144 ~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (341)
.+++.++.++|++|+++|++++..... ........ ..+...................+..
T Consensus 78 ~~a~~~a~~~p~~v~~~vl~~~~~~~~-----~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~--------- 137 (228)
T PF12697_consen 78 MIALRLAARYPDRVKGLVLLSPPPPLP-----DSPSRSFG------PSFIRRLLAWRSRSLRRLASRFFYR--------- 137 (228)
T ss_dssp HHHHHHHHHSGGGEEEEEEESESSSHH-----HHHCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred ccccccccccccccccceeeccccccc-----cccccccc------chhhhhhhhcccccccccccccccc---------
Confidence 999999999999999999999975310 00000000 0000000000000000000000000
Q ss_pred CCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHH
Q 038973 224 DIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQ 303 (341)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~ 303 (341)
.. ........... ........+.... .. .++...++.+++|+++++|++|.+++.+..+
T Consensus 138 -~~---~~~~~~~~~~~--------~~~~~~~~~~~~~--~~-------~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~ 196 (228)
T PF12697_consen 138 -WF---DGDEPEDLIRS--------SRRALAEYLRSNL--WQ-------ADLSEALPRIKVPVLVIHGEDDPIVPPESAE 196 (228)
T ss_dssp -HH---THHHHHHHHHH--------HHHHHHHHHHHHH--HH-------HHHHHHHHGSSSEEEEEEETTSSSSHHHHHH
T ss_pred -cc---ccccccccccc--------ccccccccccccc--cc-------ccccccccccCCCeEEeecCCCCCCCHHHHH
Confidence 00 00000000000 0000000000000 00 0111224455777999999999999999999
Q ss_pred HHHhhCCCcEEEEecCCCcccccC-HHHHHHH
Q 038973 304 FISEKLPWIQYHEVPDAGHLFIFE-RKFCEAI 334 (341)
Q Consensus 304 ~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~ 334 (341)
.+.+.++++++++++|+||+++.+ |+++++.
T Consensus 197 ~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 197 ELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred HHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 999999999999999999999999 9998863
No 38
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=6.7e-29 Score=209.13 Aligned_cols=273 Identities=14% Similarity=0.153 Sum_probs=157.0
Q ss_pred ceEccCCc--EEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCC-C-C----
Q 038973 42 RIKLSDGR--HVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPL-R-T---- 113 (341)
Q Consensus 42 ~~~~~~g~--~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~-~-~---- 113 (341)
.+...+|. .+++..+... .++|+|||+||++++...|...+..|.+ +|+|+++|+||||.|+.+.. . +
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~--~~~p~vvllHG~~~~~~~~~~~~~~L~~--~~~vi~~D~rG~G~S~~~~~~~~~~~~~ 158 (402)
T PLN02894 83 WFRSASNEPRFINTVTFDSK--EDAPTLVMVHGYGASQGFFFRNFDALAS--RFRVIAIDQLGWGGSSRPDFTCKSTEET 158 (402)
T ss_pred ceecccCcCCeEEEEEecCC--CCCCEEEEECCCCcchhHHHHHHHHHHh--CCEEEEECCCCCCCCCCCCcccccHHHH
Confidence 34333443 5666655322 3568999999999999999988888876 58999999999999976432 1 1
Q ss_pred ccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhh
Q 038973 114 VKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRT 193 (341)
Q Consensus 114 ~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (341)
.+.+++++.++++.++. ++++++||||||.+++.+|.++|++|+++|++++........ ........... .+.
T Consensus 159 ~~~~~~~i~~~~~~l~~-~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~----~~~~~~~~~~~--~~~ 231 (402)
T PLN02894 159 EAWFIDSFEEWRKAKNL-SNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESD----DKSEWLTKFRA--TWK 231 (402)
T ss_pred HHHHHHHHHHHHHHcCC-CCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcc----hhHHHHhhcch--hHH
Confidence 12356778888888888 799999999999999999999999999999998864321110 00000000000 000
Q ss_pred HHH------------------hhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHH
Q 038973 194 FRI------------------AYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHE 255 (341)
Q Consensus 194 ~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (341)
... ..+.+.+....... .+... .............+..+......... .......
T Consensus 232 ~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~-~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 304 (402)
T PLN02894 232 GAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTA-RFGAH----STGDILSEEESKLLTDYVYHTLAAKA--SGELCLK 304 (402)
T ss_pred HHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHH-Hhhhc----ccccccCcchhhHHHHHHHHhhcCCC--chHHHHH
Confidence 000 00000000000000 00000 00000111111111111100000000 0000000
Q ss_pred HHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhC-CCcEEEEecCCCcccccC-HHHHHH
Q 038973 256 SLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKL-PWIQYHEVPDAGHLFIFE-RKFCEA 333 (341)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~gH~~~~e-p~~~~~ 333 (341)
.. .....+ ...++...++++++|+++|+|++|.+.+ .....+.+.. +.+++++++++||+++.| |+.|++
T Consensus 305 ~~-----~~~~~~--~~~~~~~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~ 376 (402)
T PLN02894 305 YI-----FSFGAF--ARKPLLESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHS 376 (402)
T ss_pred Hh-----ccCchh--hcchHhhhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHH
Confidence 00 000001 0112333467788999999999998776 5555555555 468999999999999999 999999
Q ss_pred HHHHHhh
Q 038973 334 IIRALLV 340 (341)
Q Consensus 334 ~i~~fl~ 340 (341)
.+.+|++
T Consensus 377 ~l~~~~~ 383 (402)
T PLN02894 377 AVLYACR 383 (402)
T ss_pred HHHHHHH
Confidence 9998875
No 39
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=5e-29 Score=199.38 Aligned_cols=244 Identities=22% Similarity=0.252 Sum_probs=153.3
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC---CCCccchHHH-HHHHHHHhCCCCcEEEEEec
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP---LRTVKTEACD-VEQLADKLQIGSKFYVIGIS 140 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~---~~~~~~~~~d-l~~~l~~l~~~~~~~lvGhS 140 (341)
|+||++||++++...|.++++.|. + +|+|+++|+||+|.|+.+. ..++++.+++ +..+++.++. ++++++|||
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~-~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~G~S 78 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLG-P-HFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGI-EPFFLVGYS 78 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhc-c-cCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCC-CeEEEEEec
Confidence 689999999999999999999997 4 8999999999999997644 3578888888 7888888887 799999999
Q ss_pred cChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhh-hchhhhHHhhhcccccccccc
Q 038973 141 MGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAY-YFPWLLNLWMSQKWFPTLSIM 219 (341)
Q Consensus 141 ~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 219 (341)
+||.+++.++.++|++|++++++++.... ........ .......+...+.. ........+.....+.
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~~~-----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 146 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSPGL-----ATEEERAA--RRQNDEQLAQRFEQEGLEAFLDDWYQQPLFA----- 146 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCCCc-----CchHhhhh--hhhcchhhhhHHHhcCccHHHHHHhcCceee-----
Confidence 99999999999999999999999886431 11100000 00000000000000 0000000000000000
Q ss_pred cccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCCh
Q 038973 220 SGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPS 299 (341)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~ 299 (341)
..........+.+........ . ......+...... ...+....+.++++|+++++|++|..++
T Consensus 147 --~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~- 209 (251)
T TIGR03695 147 --SQKNLPPEQRQALRAKRLANN---P----EGLAKMLRATGLG-------KQPSLWPKLQALTIPVLYLCGEKDEKFV- 209 (251)
T ss_pred --ecccCChHHhHHHHHhccccc---c----hHHHHHHHHhhhh-------cccchHHHhhCCCCceEEEeeCcchHHH-
Confidence 000011111111111100000 0 0000111000000 0011222356788999999999998774
Q ss_pred HHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhh
Q 038973 300 QINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLV 340 (341)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 340 (341)
+..+.+.+..+++++++++++||+++.+ |+++.+.|.+|++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 210 QIAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred HHHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 5677888888999999999999999999 9999999999984
No 40
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.97 E-value=5.8e-30 Score=182.12 Aligned_cols=247 Identities=18% Similarity=0.196 Sum_probs=171.9
Q ss_pred CCCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCC-CCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCC-C--
Q 038973 38 VTSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSS-KDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLR-T-- 113 (341)
Q Consensus 38 ~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~-~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~-~-- 113 (341)
.++..+.+ +|.+++|..+|.++ ..||+++|..++ ...|.+.+..+.+...+.|+++|.||+|.|.++... .
T Consensus 21 ~te~kv~v-ng~ql~y~~~G~G~----~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ 95 (277)
T KOG2984|consen 21 YTESKVHV-NGTQLGYCKYGHGP----NYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQ 95 (277)
T ss_pred hhhheeee-cCceeeeeecCCCC----ceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHH
Confidence 34555666 99999999999874 478888987554 678888888887776789999999999999876643 3
Q ss_pred -ccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhh
Q 038973 114 -VKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQR 192 (341)
Q Consensus 114 -~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (341)
+..-+++..++++.|+. +++.++|+|-||..++..|+++++.|.++|++++..... ......+......+.|
T Consensus 96 ff~~Da~~avdLM~aLk~-~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn------~~~~ma~kgiRdv~kW 168 (277)
T KOG2984|consen 96 FFMKDAEYAVDLMEALKL-EPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVN------HLGAMAFKGIRDVNKW 168 (277)
T ss_pred HHHHhHHHHHHHHHHhCC-CCeeEeeecCCCeEEEEeeccChhhhhhheeecccceec------chhHHHHhchHHHhhh
Confidence 34456677888899999 899999999999999999999999999999999864311 1111111111111111
Q ss_pred hHHHhhhchhhhHHhhhcccccccccccccCCCCC-CchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccC
Q 038973 193 TFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFS-PPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFD 271 (341)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (341)
..+.... ....+. +........+. +....+.. +-
T Consensus 169 s~r~R~P----------------------~e~~Yg~e~f~~~wa~wv---------------------D~v~qf~~--~~ 203 (277)
T KOG2984|consen 169 SARGRQP----------------------YEDHYGPETFRTQWAAWV---------------------DVVDQFHS--FC 203 (277)
T ss_pred hhhhcch----------------------HHHhcCHHHHHHHHHHHH---------------------HHHHHHhh--cC
Confidence 1100000 000000 00011111110 00000000 11
Q ss_pred CCC-CCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhhC
Q 038973 272 PTD-LINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 272 ~~~-~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
..+ .+..+++++||+||++|++|++++...+-.+..+.+.+++.+++.++|.+++. +++|+.++.+||+.
T Consensus 204 dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 204 DGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred CCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccceEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 112 23358999999999999999999999999999999999999999999999999 99999999999973
No 41
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.97 E-value=7.9e-29 Score=209.63 Aligned_cols=256 Identities=22% Similarity=0.288 Sum_probs=163.2
Q ss_pred ceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCC-CCCCccchHHH
Q 038973 42 RIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPH-PLRTVKTEACD 120 (341)
Q Consensus 42 ~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~-~~~~~~~~~~d 120 (341)
.+.. ++.+++|..+|++ ++++|||+||++++...|..+...|.. +|+|+++|+||||.|... ...++++++++
T Consensus 113 ~~~~-~~~~i~~~~~g~~---~~~~vl~~HG~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~ 186 (371)
T PRK14875 113 KARI-GGRTVRYLRLGEG---DGTPVVLIHGFGGDLNNWLFNHAALAA--GRPVIALDLPGHGASSKAVGAGSLDELAAA 186 (371)
T ss_pred cceE-cCcEEEEecccCC---CCCeEEEECCCCCccchHHHHHHHHhc--CCEEEEEcCCCCCCCCCCCCCCCHHHHHHH
Confidence 3444 6778999888764 458999999999999999999998876 589999999999999643 45689999999
Q ss_pred HHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhc
Q 038973 121 VEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYF 200 (341)
Q Consensus 121 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (341)
+.++++.++. .+++++|||+||.+++.+|..+|++++++|++++.... +. .. ..+............+.
T Consensus 187 ~~~~~~~~~~-~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~-----~~-~~-~~~~~~~~~~~~~~~~~--- 255 (371)
T PRK14875 187 VLAFLDALGI-ERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLG-----PE-IN-GDYIDGFVAAESRRELK--- 255 (371)
T ss_pred HHHHHHhcCC-ccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcC-----cc-cc-hhHHHHhhcccchhHHH---
Confidence 9999999998 79999999999999999999999999999999875321 00 00 00000000000000000
Q ss_pred hhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCC
Q 038973 201 PWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFP 280 (341)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (341)
+ +.. ..+. ...... ............... .......+....... .....+....+.
T Consensus 256 ~-----~~~-~~~~-------~~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~l~ 311 (371)
T PRK14875 256 P-----VLE-LLFA-------DPALVT---RQMVEDLLKYKRLDG----VDDALRALADALFAG----GRQRVDLRDRLA 311 (371)
T ss_pred H-----HHH-HHhc-------ChhhCC---HHHHHHHHHHhcccc----HHHHHHHHHHHhccC----cccchhHHHHHh
Confidence 0 000 0000 000011 111111110000000 000000000000000 000011222356
Q ss_pred CCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhhC
Q 038973 281 DNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 281 ~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
+++||+++++|++|.++|.+..+.+ .++.++.+++++||+++++ |+++.+.|.+|+++
T Consensus 312 ~i~~Pvlii~g~~D~~vp~~~~~~l---~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 312 SLAIPVLVIWGEQDRIIPAAHAQGL---PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred cCCCCEEEEEECCCCccCHHHHhhc---cCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 7788999999999999998766544 3468999999999999999 99999999999974
No 42
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.96 E-value=1.6e-27 Score=196.14 Aligned_cols=262 Identities=16% Similarity=0.132 Sum_probs=162.3
Q ss_pred eEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCC-c------------------------c-hhhHHHHHHhcCceEE
Q 038973 43 IKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKD-L------------------------N-LPVSQELIEELKIYFL 96 (341)
Q Consensus 43 ~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~-~------------------------~-~~~~~~l~~~~~~~vi 96 (341)
+...||.+|+++.|.+. .++.+|+++||++++.. . | ..+++.|.++ ||+|+
T Consensus 2 ~~~~~g~~l~~~~~~~~--~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~-G~~V~ 78 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK--NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKN-GYSVY 78 (332)
T ss_pred ccCCCCCeEEEeeeecc--CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHC-CCcEE
Confidence 44568999999998653 35679999999998875 1 1 3567888776 99999
Q ss_pred EEcCCCCCCCCCC---CC--CCccchHHHHHHHHHHhCC-----------------------CCcEEEEEeccChHHHHH
Q 038973 97 SFDRPGYGESDPH---PL--RTVKTEACDVEQLADKLQI-----------------------GSKFYVIGISMGAYPVYG 148 (341)
Q Consensus 97 ~~D~~G~G~S~~~---~~--~~~~~~~~dl~~~l~~l~~-----------------------~~~~~lvGhS~Gg~~a~~ 148 (341)
++|+||||.|+.. .. .+++++++|+.++++.... +.+++++||||||.+++.
T Consensus 79 ~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 79 GLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred EecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHH
Confidence 9999999999743 22 3788999999999886421 358999999999999999
Q ss_pred HHhhccc--------cccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhhccccccccccc
Q 038973 149 CLKYIPQ--------RLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMS 220 (341)
Q Consensus 149 ~a~~~p~--------~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (341)
++..+++ .++++|+++|.......+.+... .+. .....+.... ..+.+......
T Consensus 159 ~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~---~~~------~~~~~l~~~~---------~~~~p~~~~~~ 220 (332)
T TIGR01607 159 LLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSF---KFK------YFYLPVMNFM---------SRVFPTFRISK 220 (332)
T ss_pred HHHHhccccccccccccceEEEeccceEEecccCCCcc---hhh------hhHHHHHHHH---------HHHCCcccccC
Confidence 9876542 58999988887532100000000 000 0000000000 01111111100
Q ss_pred ccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCC--CccEEEEEeecCCCCC
Q 038973 221 GNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDN--EGSVHIWQGCEDRIIP 298 (341)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~Pvlii~g~~D~~~p 298 (341)
...+. .++.....+..++.......... ....+..... .+...+..+ ++|+|+++|++|.+++
T Consensus 221 --~~~~~-~~~~~~~~~~~Dp~~~~~~~s~~-~~~~l~~~~~-----------~~~~~~~~i~~~~P~Lii~G~~D~vv~ 285 (332)
T TIGR01607 221 --KIRYE-KSPYVNDIIKFDKFRYDGGITFN-LASELIKATD-----------TLDCDIDYIPKDIPILFIHSKGDCVCS 285 (332)
T ss_pred --ccccc-cChhhhhHHhcCccccCCcccHH-HHHHHHHHHH-----------HHHhhHhhCCCCCCEEEEEeCCCCccC
Confidence 00111 12223333344443322111111 1111111110 011112223 6779999999999999
Q ss_pred hHHHHHHHhhC--CCcEEEEecCCCcccccC--HHHHHHHHHHHhh
Q 038973 299 SQINQFISEKL--PWIQYHEVPDAGHLFIFE--RKFCEAIIRALLV 340 (341)
Q Consensus 299 ~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e--p~~~~~~i~~fl~ 340 (341)
++.++.+.+.. ++.++++++|++|.++.| ++++.+.|.+||+
T Consensus 286 ~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 286 YEGTVSFYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHHHHHHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 99999888766 578999999999999997 6889999999986
No 43
>PLN02511 hydrolase
Probab=99.96 E-value=1.7e-28 Score=205.93 Aligned_cols=275 Identities=14% Similarity=0.083 Sum_probs=160.1
Q ss_pred CCCCCceEccCCcEEEEEEccC---CCCCCCceEEEEcCCCCCCCc-c-hhhHHHHHHhcCceEEEEcCCCCCCCCCCC-
Q 038973 37 PVTSPRIKLSDGRHVAYREAGV---PKEEANHKIIIIHGFGSSKDL-N-LPVSQELIEELKIYFLSFDRPGYGESDPHP- 110 (341)
Q Consensus 37 ~~~~~~~~~~~g~~l~~~~~g~---~~~~~~~~vl~~hG~~~~~~~-~-~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~- 110 (341)
.+++..+.+.||..+.+..... ..+..+|+||++||+++++.. | ..++..+.++ ||+|+++|+||||.|....
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~-g~~vv~~d~rG~G~s~~~~~ 148 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSK-GWRVVVFNSRGCADSPVTTP 148 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHC-CCEEEEEecCCCCCCCCCCc
Confidence 3455678888999888755421 122457899999999877643 4 4566666655 9999999999999997432
Q ss_pred CCCccchHHHHHHHHHHhCC---CCcEEEEEeccChHHHHHHHhhcccc--ccceeeecccccccCCCCCccchhhhhhc
Q 038973 111 LRTVKTEACDVEQLADKLQI---GSKFYVIGISMGAYPVYGCLKYIPQR--LAGASLVVPFVHYWWPCLPANLSREALQR 185 (341)
Q Consensus 111 ~~~~~~~~~dl~~~l~~l~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~~il~~~~~~~~~~~~~~~~~~~~~~~ 185 (341)
......+++|+.+++++++. +.+++++||||||.+++.++.++|++ |.++++++++... ......+..
T Consensus 149 ~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l-------~~~~~~~~~ 221 (388)
T PLN02511 149 QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDL-------VIADEDFHK 221 (388)
T ss_pred CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCH-------HHHHHHHhc
Confidence 33446778899999888754 25899999999999999999999987 8888888765321 001111111
Q ss_pred CcchhhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcc
Q 038973 186 LPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGY 265 (341)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (341)
... ................. ....+....................+......... .......++.
T Consensus 222 ~~~-~~y~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~------gf~~~~~yy~------ 286 (388)
T PLN02511 222 GFN-NVYDKALAKALRKIFAK--HALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSF------GFKSVDAYYS------ 286 (388)
T ss_pred cHH-HHHHHHHHHHHHHHHHH--HHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcC------CCCCHHHHHH------
Confidence 000 00000000000000000 00000000000000000000000000000000000 0000000000
Q ss_pred cccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHH-HHHHhhCCCcEEEEecCCCcccccC-HHH------HHHHHHH
Q 038973 266 AKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQIN-QFISEKLPWIQYHEVPDAGHLFIFE-RKF------CEAIIRA 337 (341)
Q Consensus 266 ~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~-~~~~~~~~~~~~~~~~~~gH~~~~e-p~~------~~~~i~~ 337 (341)
..+....+++|++|+|+|+|++|+++|.+.. ..+++..|++++++++++||+.++| |+. +.+.+.+
T Consensus 287 ------~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~ 360 (388)
T PLN02511 287 ------NSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVME 360 (388)
T ss_pred ------HcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHH
Confidence 0122334778999999999999999998754 5577788999999999999999998 765 5888888
Q ss_pred Hhh
Q 038973 338 LLV 340 (341)
Q Consensus 338 fl~ 340 (341)
|++
T Consensus 361 Fl~ 363 (388)
T PLN02511 361 FLE 363 (388)
T ss_pred HHH
Confidence 885
No 44
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.96 E-value=5.8e-28 Score=232.61 Aligned_cols=256 Identities=18% Similarity=0.239 Sum_probs=159.2
Q ss_pred EEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC---------CCCccchHHHH
Q 038973 51 VAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP---------LRTVKTEACDV 121 (341)
Q Consensus 51 l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~---------~~~~~~~~~dl 121 (341)
++|+..|.. ..+++|||+||++++...|.+++..|.+ +|+|+++|+||||.|.... .++++++++++
T Consensus 1360 i~~~~~G~~--~~~~~vVllHG~~~s~~~w~~~~~~L~~--~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l 1435 (1655)
T PLN02980 1360 IKVHEVGQN--AEGSVVLFLHGFLGTGEDWIPIMKAISG--SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLL 1435 (1655)
T ss_pred EEEEecCCC--CCCCeEEEECCCCCCHHHHHHHHHHHhC--CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHH
Confidence 445555542 3468999999999999999999998875 5889999999999997432 35789999999
Q ss_pred HHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhh-hc
Q 038973 122 EQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAY-YF 200 (341)
Q Consensus 122 ~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 200 (341)
.+++++++. ++++++||||||.+++.++.++|++|+++|++++.... ..... ........ ......... ..
T Consensus 1436 ~~ll~~l~~-~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~-----~~~~~-~~~~~~~~-~~~~~~l~~~g~ 1507 (1655)
T PLN02980 1436 YKLIEHITP-GKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGL-----KDEVA-RKIRSAKD-DSRARMLIDHGL 1507 (1655)
T ss_pred HHHHHHhCC-CCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCcc-----CchHH-HHHHhhhh-hHHHHHHHhhhH
Confidence 999999998 79999999999999999999999999999999875321 11000 00000000 000000000 00
Q ss_pred hhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCC
Q 038973 201 PWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFP 280 (341)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (341)
.. +...++....... .. ......+........... ......+ ...... ...++...++
T Consensus 1508 ~~-----~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~-------~~~~~~l-~~~~~~------~~~dl~~~L~ 1565 (1655)
T PLN02980 1508 EI-----FLENWYSGELWKS--LR-NHPHFNKIVASRLLHKDV-------PSLAKLL-SDLSIG------RQPSLWEDLK 1565 (1655)
T ss_pred HH-----HHHHhccHHHhhh--hc-cCHHHHHHHHHHHhcCCH-------HHHHHHH-HHhhhc------ccchHHHHHh
Confidence 00 0111111000000 00 000000111100000000 0000000 000000 0012233477
Q ss_pred CCCccEEEEEeecCCCCChHHHHHHHhhCCC------------cEEEEecCCCcccccC-HHHHHHHHHHHhhC
Q 038973 281 DNEGSVHIWQGCEDRIIPSQINQFISEKLPW------------IQYHEVPDAGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 281 ~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~------------~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
++++|+|+|+|++|..++ +.++++.+.+++ +++++++++||++++| |+++++.|.+|+++
T Consensus 1566 ~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1566 QCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred hCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHh
Confidence 888999999999999875 667778887765 4899999999999999 99999999999964
No 45
>PRK05855 short chain dehydrogenase; Validated
Probab=99.96 E-value=1e-27 Score=214.89 Aligned_cols=272 Identities=14% Similarity=0.120 Sum_probs=160.3
Q ss_pred ceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC---CCCccchH
Q 038973 42 RIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP---LRTVKTEA 118 (341)
Q Consensus 42 ~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~---~~~~~~~~ 118 (341)
++...+|.+++|..+|++ .+|+|||+||++++...|..+.+.|.+ +|+|+++|+||||.|+.+. .+++++++
T Consensus 6 ~~~~~~g~~l~~~~~g~~---~~~~ivllHG~~~~~~~w~~~~~~L~~--~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a 80 (582)
T PRK05855 6 TVVSSDGVRLAVYEWGDP---DRPTVVLVHGYPDNHEVWDGVAPLLAD--RFRVVAYDVRGAGRSSAPKRTAAYTLARLA 80 (582)
T ss_pred EEEeeCCEEEEEEEcCCC---CCCeEEEEcCCCchHHHHHHHHHHhhc--ceEEEEecCCCCCCCCCCCcccccCHHHHH
Confidence 445568999999999864 368999999999999999999999843 7999999999999998543 46899999
Q ss_pred HHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhh--ccccccceeeecccccccCCCCCccchhhhhhcCc---chhhhh
Q 038973 119 CDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKY--IPQRLAGASLVVPFVHYWWPCLPANLSREALQRLP---VENQRT 193 (341)
Q Consensus 119 ~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 193 (341)
+|+.+++++++.+.+++|+||||||.+++.++.. .++++..++.++++.. .. ......... ......
T Consensus 81 ~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~ 152 (582)
T PRK05855 81 DDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSL-------DH-VGFWLRSGLRRPTPRRLA 152 (582)
T ss_pred HHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCch-------HH-HHHHHhhcccccchhhhh
Confidence 9999999999874459999999999999888766 2445555554443210 00 000000000 000000
Q ss_pred HHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHh--h--hhhHHHHHHHHhhcccccc
Q 038973 194 FRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKIL--Q--QGIHESLYRDLKTGYAKWE 269 (341)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~ 269 (341)
....................+...... ......................... . ......+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 220 (582)
T PRK05855 153 RALGQLLRSWYIYLFHLPVLPELLWRL----GLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANM-------- 220 (582)
T ss_pred HHHHHHhhhHHHHHHhCCCCcHHHhcc----chhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhh--------
Confidence 000000000000000000000000000 0000000000000000000000000 0 00000000000
Q ss_pred cCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhh
Q 038973 270 FDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLV 340 (341)
Q Consensus 270 ~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 340 (341)
........+..+++|+++|+|++|.++|++..+.+++.+++.++++++ +||+++.| |+++.+.|.+|+.
T Consensus 221 -~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~ 290 (582)
T PRK05855 221 -IRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVAEFVD 290 (582)
T ss_pred -hhhhccCccCCccCceEEEEeCCCcccCHHHhccccccCCcceEEEcc-CCCcchhhChhHHHHHHHHHHH
Confidence 000112235568899999999999999999999999889999998887 69999999 9999999999986
No 46
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.95 E-value=5.3e-27 Score=182.27 Aligned_cols=265 Identities=17% Similarity=0.137 Sum_probs=167.0
Q ss_pred EEEEEEc-cCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHh
Q 038973 50 HVAYREA-GVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKL 128 (341)
Q Consensus 50 ~l~~~~~-g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l 128 (341)
++.|... -..+....|+++++||+.++...|..+...|..+.+-.|+++|.|.||.|......+..++++|+..+++..
T Consensus 37 ~l~y~~~~~~~~~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v 116 (315)
T KOG2382|consen 37 RLAYDSVYSSENLERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGV 116 (315)
T ss_pred ccceeeeecccccCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHc
Confidence 3444443 222334679999999999999999999999999988899999999999999888889999999999999988
Q ss_pred C---CCCcEEEEEeccCh-HHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhh---hHHHhhhch
Q 038973 129 Q---IGSKFYVIGISMGA-YPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQR---TFRIAYYFP 201 (341)
Q Consensus 129 ~---~~~~~~lvGhS~Gg-~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 201 (341)
+ ...+++++|||||| .+++..+..+|+.+..+|+++-.... -+.........+......... ........+
T Consensus 117 ~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~--~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~ 194 (315)
T KOG2382|consen 117 GGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGG--VGRSYGEYRELIKAMIQLDLSIGVSRGRKEALK 194 (315)
T ss_pred ccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCcc--CCcccchHHHHHHHHHhccccccccccHHHHHH
Confidence 5 12799999999999 77888888999999999999865420 011111111111111000000 000000000
Q ss_pred hhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcC--CCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCC
Q 038973 202 WLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSES--PSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPF 279 (341)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (341)
.+.. ........+.+...... ................+..+.. ....| .+ +..
T Consensus 195 ~l~~------------------~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~-~~s~~-~~---l~~-- 249 (315)
T KOG2382|consen 195 SLIE------------------VGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYE-ILSYW-AD---LED-- 249 (315)
T ss_pred HHHH------------------HhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHH-hhccc-cc---ccc--
Confidence 0000 00000001111111110 0000000011111111111111 11111 11 111
Q ss_pred CCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhhC
Q 038973 280 PDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 280 ~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
.....||+++.|.++..+|.+.-.++.+.+|+++++.++++||++|.| |+++.++|.+|+++
T Consensus 250 ~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 250 GPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFLEE 312 (315)
T ss_pred cccccceeEEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHhcc
Confidence 234556999999999999999999999999999999999999999999 99999999999864
No 47
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=9.1e-27 Score=193.60 Aligned_cols=282 Identities=15% Similarity=0.127 Sum_probs=162.6
Q ss_pred CCcEEEEEEccCCCCCCCceEEEEcCCCCCCC-------------cchhhHHH--HHHhcCceEEEEcCCCCCCCCC---
Q 038973 47 DGRHVAYREAGVPKEEANHKIIIIHGFGSSKD-------------LNLPVSQE--LIEELKIYFLSFDRPGYGESDP--- 108 (341)
Q Consensus 47 ~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~-------------~~~~~~~~--l~~~~~~~vi~~D~~G~G~S~~--- 108 (341)
...+++|+.+|..+....++||++|++.+++. .|..++-. ..+...|.||++|..|-|.|..
T Consensus 39 ~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~ 118 (389)
T PRK06765 39 PDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNV 118 (389)
T ss_pred CCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCC
Confidence 34678999999876666789999999988542 25544321 1223369999999998775321
Q ss_pred -------------------CCCCCccchHHHHHHHHHHhCCCCcEE-EEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 109 -------------------HPLRTVKTEACDVEQLADKLQIGSKFY-VIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 109 -------------------~~~~~~~~~~~dl~~~l~~l~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
.+.++++++++++..+++++++ ++++ ++||||||++++.+|.++|++|+++|++++...
T Consensus 119 g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi-~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~ 197 (389)
T PRK06765 119 ITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGI-ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQ 197 (389)
T ss_pred CCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCC-CCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCC
Confidence 1125899999999999999999 7886 999999999999999999999999999988643
Q ss_pred ccCCCCCcc-c-hhhhhhcCcchh------------hhhHHHhhhchhhhHHhhhcccccccccc----cccC--CCCCC
Q 038973 169 YWWPCLPAN-L-SREALQRLPVEN------------QRTFRIAYYFPWLLNLWMSQKWFPTLSIM----SGNM--DIFSP 228 (341)
Q Consensus 169 ~~~~~~~~~-~-~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~ 228 (341)
.. +.. . ............ .-...+...............++...... ...+ .....
T Consensus 198 ~~----~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~ 273 (389)
T PRK06765 198 ND----AWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTL 273 (389)
T ss_pred CC----hhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccch
Confidence 11 000 0 000000000000 00000000000000000001111000000 0000 00000
Q ss_pred chHHH-HHHhhcCCCCchhHHhhhhhHHHHHHHHhhccccccc--CCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHH
Q 038973 229 PDLEI-LKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEF--DPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFI 305 (341)
Q Consensus 229 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~ 305 (341)
...+. +......... ......+-.+. .....+.. ...++...+.++++|+|+|+|++|.++|++..+++
T Consensus 274 ~~~e~yl~~~~~~~~~----~~Dan~~l~l~----~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~l 345 (389)
T PRK06765 274 TSFEKEINKATYRRAE----LVDANHWLYLA----KAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKM 345 (389)
T ss_pred hhHHHHHHHHHHHhhh----ccChhhHHHHH----HHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHH
Confidence 01111 1111000000 00000000000 01111100 01133445778899999999999999999999999
Q ss_pred HhhCC----CcEEEEecC-CCcccccC-HHHHHHHHHHHhhC
Q 038973 306 SEKLP----WIQYHEVPD-AGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 306 ~~~~~----~~~~~~~~~-~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
++.+| +++++++++ +||+.+++ |+++.+.|.+|+++
T Consensus 346 a~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 346 VDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred HHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 99886 689999985 99999999 99999999999964
No 48
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.95 E-value=4.8e-26 Score=165.25 Aligned_cols=218 Identities=18% Similarity=0.181 Sum_probs=155.5
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCC-CCCCCccchHHHHHHHHHHh---CCCCcEEEEEec
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDP-HPLRTVKTEACDVEQLADKL---QIGSKFYVIGIS 140 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~-~~~~~~~~~~~dl~~~l~~l---~~~~~~~lvGhS 140 (341)
..|||+||+.|+....+.+.+.|.++ ||.|.+|.+||||.... --..+.++|.+|+.+..++| +. +.|.++|.|
T Consensus 16 ~AVLllHGFTGt~~Dvr~Lgr~L~e~-GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy-~eI~v~GlS 93 (243)
T COG1647 16 RAVLLLHGFTGTPRDVRMLGRYLNEN-GYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGY-DEIAVVGLS 93 (243)
T ss_pred EEEEEEeccCCCcHHHHHHHHHHHHC-CceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCC-CeEEEEeec
Confidence 58999999999999999999999887 99999999999998752 22458888888888777766 45 799999999
Q ss_pred cChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhhccccccccccc
Q 038973 141 MGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMS 220 (341)
Q Consensus 141 ~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (341)
|||.+++.+|..+| ++++|.++++...... . ..+..... ++
T Consensus 94 mGGv~alkla~~~p--~K~iv~m~a~~~~k~~----~----------------~iie~~l~----------y~------- 134 (243)
T COG1647 94 MGGVFALKLAYHYP--PKKIVPMCAPVNVKSW----R----------------IIIEGLLE----------YF------- 134 (243)
T ss_pred chhHHHHHHHhhCC--ccceeeecCCcccccc----h----------------hhhHHHHH----------HH-------
Confidence 99999999999998 9999999987642110 0 00000000 00
Q ss_pred ccCCCCCCchHHHHHHhhcCCC--CchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCC
Q 038973 221 GNMDIFSPPDLEILKKLSESPS--EGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIP 298 (341)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p 298 (341)
.+...+...+.+.......... ..........+. . ++...+..|..|++++.|++|+.+|
T Consensus 135 ~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i----~--------------~~~~~~~~I~~pt~vvq~~~D~mv~ 196 (243)
T COG1647 135 RNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLI----K--------------DARRSLDKIYSPTLVVQGRQDEMVP 196 (243)
T ss_pred HHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHHHH----H--------------HHHhhhhhcccchhheecccCCCCC
Confidence 0112222233333333322211 101111111111 1 2334466777789999999999999
Q ss_pred hHHHHHHHhhC--CCcEEEEecCCCcccccC--HHHHHHHHHHHhhC
Q 038973 299 SQINQFISEKL--PWIQYHEVPDAGHLFIFE--RKFCEAIIRALLVR 341 (341)
Q Consensus 299 ~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e--p~~~~~~i~~fl~~ 341 (341)
.+.+..+.+.. .+.++.+++++||.+-.+ .+.+.+.+..||+.
T Consensus 197 ~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 197 AESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 99999999887 357999999999999886 89999999999974
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.94 E-value=1.6e-25 Score=188.70 Aligned_cols=237 Identities=14% Similarity=0.104 Sum_probs=149.4
Q ss_pred CCCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCC-CcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC-CCCcc
Q 038973 38 VTSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSK-DLNLPVSQELIEELKIYFLSFDRPGYGESDPHP-LRTVK 115 (341)
Q Consensus 38 ~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~-~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~-~~~~~ 115 (341)
++...+...+|.++....+.+..+.+.|+||++||+.+.. +.|..+.+.|.++ ||.|+++|+||+|.|.... ..+..
T Consensus 168 ~e~v~i~~~~g~~l~g~l~~P~~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~-Gy~vl~~D~pG~G~s~~~~~~~d~~ 246 (414)
T PRK05077 168 LKELEFPIPGGGPITGFLHLPKGDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPR-GIAMLTIDMPSVGFSSKWKLTQDSS 246 (414)
T ss_pred eEEEEEEcCCCcEEEEEEEECCCCCCccEEEEeCCcccchhhhHHHHHHHHHhC-CCEEEEECCCCCCCCCCCCccccHH
Confidence 4555666667767887666554333456777767766653 5687777888776 9999999999999996532 22333
Q ss_pred chHHHHHHHHHHh---CCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhh
Q 038973 116 TEACDVEQLADKL---QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQR 192 (341)
Q Consensus 116 ~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (341)
...+++.+++... +. ++++++||||||.+++.+|..+|++|+++|++++..... .. ......
T Consensus 247 ~~~~avld~l~~~~~vd~-~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~----~~---~~~~~~------- 311 (414)
T PRK05077 247 LLHQAVLNALPNVPWVDH-TRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTL----LT---DPKRQQ------- 311 (414)
T ss_pred HHHHHHHHHHHhCcccCc-ccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchh----hc---chhhhh-------
Confidence 3444555555544 44 689999999999999999999999999999999864210 00 000000
Q ss_pred hHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCC
Q 038973 193 TFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDP 272 (341)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (341)
..+......+... +. ....+.+.+... + ..|....
T Consensus 312 ------~~p~~~~~~la~~-lg-----------~~~~~~~~l~~~-------------------l--------~~~sl~~ 346 (414)
T PRK05077 312 ------QVPEMYLDVLASR-LG-----------MHDASDEALRVE-------------------L--------NRYSLKV 346 (414)
T ss_pred ------hchHHHHHHHHHH-hC-----------CCCCChHHHHHH-------------------h--------hhccchh
Confidence 0000000000000 00 000001111000 0 0000000
Q ss_pred CCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhh
Q 038973 273 TDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLV 340 (341)
Q Consensus 273 ~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 340 (341)
.... ..++++|+|+|+|++|.++|.+.++.+++..|++++++++++ ++.+ ++++.+.+.+||+
T Consensus 347 ~~~l--~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~~l~~i~~~---~~~e~~~~~~~~i~~wL~ 410 (414)
T PRK05077 347 QGLL--GRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADGKLLEIPFK---PVYRNFDKALQEISDWLE 410 (414)
T ss_pred hhhh--ccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCCeEEEccCC---CccCCHHHHHHHHHHHHH
Confidence 0000 146788899999999999999999999999999999999986 4556 9999999999986
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.94 E-value=1.4e-25 Score=184.90 Aligned_cols=270 Identities=12% Similarity=0.057 Sum_probs=148.6
Q ss_pred CCCceEccCCcEEEEEEccC-CCCCCCceEEEEcCCCCCCCc--chhhHHHHHHhcCceEEEEcCCCCCCCCCC-CCCCc
Q 038973 39 TSPRIKLSDGRHVAYREAGV-PKEEANHKIIIIHGFGSSKDL--NLPVSQELIEELKIYFLSFDRPGYGESDPH-PLRTV 114 (341)
Q Consensus 39 ~~~~~~~~~g~~l~~~~~g~-~~~~~~~~vl~~hG~~~~~~~--~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~-~~~~~ 114 (341)
+...+++.||..+.+..... .....+|+||++||++++... +..++..|.++ ||+|+++|+||||.+... .....
T Consensus 32 ~~~~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~-G~~v~~~d~rG~g~~~~~~~~~~~ 110 (324)
T PRK10985 32 YWQRLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKR-GWLGVVMHFRGCSGEPNRLHRIYH 110 (324)
T ss_pred ceeEEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHC-CCEEEEEeCCCCCCCccCCcceEC
Confidence 45668888998776654322 222356899999999887544 34677778765 999999999999987532 11111
Q ss_pred cchHHHHHHHHH----HhCCCCcEEEEEeccChHHHHHHHhhcccc--ccceeeecccccccCCCCCccchhhhhhcCcc
Q 038973 115 KTEACDVEQLAD----KLQIGSKFYVIGISMGAYPVYGCLKYIPQR--LAGASLVVPFVHYWWPCLPANLSREALQRLPV 188 (341)
Q Consensus 115 ~~~~~dl~~~l~----~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~--v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (341)
....+|+..+++ +++. .+++++||||||.+++.++..+++. ++++|+++++... ............
T Consensus 111 ~~~~~D~~~~i~~l~~~~~~-~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~-------~~~~~~~~~~~~ 182 (324)
T PRK10985 111 SGETEDARFFLRWLQREFGH-VPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLML-------EACSYRMEQGFS 182 (324)
T ss_pred CCchHHHHHHHHHHHHhCCC-CCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCH-------HHHHHHHhhhHH
Confidence 223455555444 3455 6899999999999988888877644 8999999986421 000000100000
Q ss_pred hhhhhHHHhhhchhhhHHhhhcccccccccccccCC-CCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccc
Q 038973 189 ENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMD-IFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAK 267 (341)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (341)
......+.......... ....+.... ..... .........+......+.. ........+. .
T Consensus 183 -~~~~~~l~~~l~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~fd~~~~~~~~-----g~~~~~~~y~--------~ 244 (324)
T PRK10985 183 -RVYQRYLLNLLKANAAR-KLAAYPGTL---PINLAQLKSVRRLREFDDLITARIH-----GFADAIDYYR--------Q 244 (324)
T ss_pred -HHHHHHHHHHHHHHHHH-HHHhccccc---cCCHHHHhcCCcHHHHhhhheeccC-----CCCCHHHHHH--------H
Confidence 00000000000000000 000000000 00000 0000000111111111000 0000000000 0
Q ss_pred cccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-H-----HHHHHHHHHHhh
Q 038973 268 WEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-R-----KFCEAIIRALLV 340 (341)
Q Consensus 268 ~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p-----~~~~~~i~~fl~ 340 (341)
.+....++++++|+++|+|++|++++.+....+.+..+++++++++++||+.+.+ . ....+.+.+|++
T Consensus 245 -----~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~ 318 (324)
T PRK10985 245 -----CSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLT 318 (324)
T ss_pred -----CChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHH
Confidence 0122336778889999999999999998888888888999999999999999886 3 355666666663
No 51
>PRK13604 luxD acyl transferase; Provisional
Probab=99.94 E-value=6.5e-25 Score=172.84 Aligned_cols=225 Identities=16% Similarity=0.136 Sum_probs=146.0
Q ss_pred CCCceEccCCcEEEEEEccCC--CCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCC-CCCCCCC-CCCc
Q 038973 39 TSPRIKLSDGRHVAYREAGVP--KEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGY-GESDPHP-LRTV 114 (341)
Q Consensus 39 ~~~~~~~~~g~~l~~~~~g~~--~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~-G~S~~~~-~~~~ 114 (341)
..+.+.+.||.+|+.+..-+. ...+.++||++||+++....+..+++.|.++ ||.|+.+|.||+ |.|+..- ..+.
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~-G~~vLrfD~rg~~GeS~G~~~~~t~ 88 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSSN-GFHVIRYDSLHHVGLSSGTIDEFTM 88 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHHC-CCEEEEecCCCCCCCCCCccccCcc
Confidence 556788889999999888654 2345589999999999887788899999876 999999999988 8996533 2344
Q ss_pred cchHHHHHHHHHHh---CCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhh
Q 038973 115 KTEACDVEQLADKL---QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQ 191 (341)
Q Consensus 115 ~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (341)
....+|+.++++.+ +. +++.|+||||||.+++..|... .++++|+.+|+... + ..+....
T Consensus 89 s~g~~Dl~aaid~lk~~~~-~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l-----~-----d~l~~~~---- 151 (307)
T PRK13604 89 SIGKNSLLTVVDWLNTRGI-NNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNL-----R-----DTLERAL---- 151 (307)
T ss_pred cccHHHHHHHHHHHHhcCC-CceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccH-----H-----HHHHHhh----
Confidence 45578887777665 44 6899999999999997777643 49999999987531 0 0000000
Q ss_pred hhHHHhhhchhhhHHhhhcccccccccccccCCC--C---CCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhccc
Q 038973 192 RTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDI--F---SPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYA 266 (341)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (341)
... + ..++.. ..+.. + .......+ .+... .
T Consensus 152 -----~~~--------~--~~~p~~----~lp~~~d~~g~~l~~~~f~------------------------~~~~~--~ 186 (307)
T PRK13604 152 -----GYD--------Y--LSLPID----ELPEDLDFEGHNLGSEVFV------------------------TDCFK--H 186 (307)
T ss_pred -----hcc--------c--ccCccc----ccccccccccccccHHHHH------------------------HHHHh--c
Confidence 000 0 000000 00000 0 00000000 00000 0
Q ss_pred ccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCC--CcEEEEecCCCcccccC
Q 038973 267 KWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLP--WIQYHEVPDAGHLFIFE 327 (341)
Q Consensus 267 ~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e 327 (341)
.|. ..........++++|+|+|||++|.++|.+.++.+.+.++ +.++++++|++|.+...
T Consensus 187 ~~~-~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~~ 248 (307)
T PRK13604 187 GWD-TLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGEN 248 (307)
T ss_pred Ccc-ccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCcc
Confidence 000 0000111144566789999999999999999999999885 68999999999988764
No 52
>PLN02872 triacylglycerol lipase
Probab=99.93 E-value=6.1e-24 Score=176.70 Aligned_cols=293 Identities=13% Similarity=0.093 Sum_probs=167.1
Q ss_pred CCCCCCCCceEccCCcEEEEEEccCCC----CCCCceEEEEcCCCCCCCcch------hhHHHHHHhcCceEEEEcCCCC
Q 038973 34 GGPPVTSPRIKLSDGRHVAYREAGVPK----EEANHKIIIIHGFGSSKDLNL------PVSQELIEELKIYFLSFDRPGY 103 (341)
Q Consensus 34 ~~~~~~~~~~~~~~g~~l~~~~~g~~~----~~~~~~vl~~hG~~~~~~~~~------~~~~~l~~~~~~~vi~~D~~G~ 103 (341)
.+.+.+++++++.||..+......++. ...+|+|+++||++.++..|. .+...|+++ ||+|+++|+||+
T Consensus 40 ~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~-GydV~l~n~RG~ 118 (395)
T PLN02872 40 AGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADH-GFDVWVGNVRGT 118 (395)
T ss_pred cCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhC-CCCccccccccc
Confidence 457779999999999999988863221 124689999999999999884 344456655 999999999998
Q ss_pred CCCCC-------CC---CCCccchH-HHHHHHHHHh---CCCCcEEEEEeccChHHHHHHHhhccc---cccceeeeccc
Q 038973 104 GESDP-------HP---LRTVKTEA-CDVEQLADKL---QIGSKFYVIGISMGAYPVYGCLKYIPQ---RLAGASLVVPF 166 (341)
Q Consensus 104 G~S~~-------~~---~~~~~~~~-~dl~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~~il~~~~ 166 (341)
+.|.. +. .+++++++ .|+.++++++ .. ++++++||||||.+++.++ .+|+ +|+.+++++|.
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~ 196 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPI 196 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcch
Confidence 76531 11 35788888 7999999986 33 6999999999999998555 5676 68899999987
Q ss_pred ccccCCCCCccchhhhhhcCcchhhhh--HHHhhhchh--hhHHhhhcccccc--------cccccccCCCCCCchHHHH
Q 038973 167 VHYWWPCLPANLSREALQRLPVENQRT--FRIAYYFPW--LLNLWMSQKWFPT--------LSIMSGNMDIFSPPDLEIL 234 (341)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 234 (341)
........+. ......... ..+. .......+. .... +....... ......+ .. .+...+
T Consensus 197 ~~~~~~~~~~---~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~-~~~~~C~~~~~c~~~~~~~~g~~-~~---~n~~~~ 267 (395)
T PLN02872 197 SYLDHVTAPL---VLRMVFMHL-DQMVVAMGIHQLNFRSDVLVK-LLDSICEGHMDCNDLLTSITGTN-CC---FNASRI 267 (395)
T ss_pred hhhccCCCHH---HHHHHHHhH-HHHHHHhcCceecCCcHHHHH-HHHHHccCchhHHHHHHHHhCCC-cc---cchhhh
Confidence 6431111110 000000000 0000 000000000 0000 00000000 0000000 00 111111
Q ss_pred HHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccC----C------CCCCCCCCCC--CccEEEEEeecCCCCChHHH
Q 038973 235 KKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFD----P------TDLINPFPDN--EGSVHIWQGCEDRIIPSQIN 302 (341)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~------~~~~~~~~~i--~~Pvlii~g~~D~~~p~~~~ 302 (341)
..+........+......+.+..... .++.+.+. . ..-.-++.++ ++|+++++|++|.+++++.+
T Consensus 268 ~~~~~~~pagtS~k~~~H~~Q~~~s~---~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv 344 (395)
T PLN02872 268 DYYLEYEPHPSSVKNLRHLFQMIRKG---TFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDV 344 (395)
T ss_pred hHHHhcCCCcchHHHHHHHHHHHhcC---CcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHH
Confidence 11111111111111111111111111 11111110 0 0011135666 57999999999999999999
Q ss_pred HHHHhhCCC-cEEEEecCCCcccc---cC-HHHHHHHHHHHhhC
Q 038973 303 QFISEKLPW-IQYHEVPDAGHLFI---FE-RKFCEAIIRALLVR 341 (341)
Q Consensus 303 ~~~~~~~~~-~~~~~~~~~gH~~~---~e-p~~~~~~i~~fl~~ 341 (341)
+.+.+.+++ .+++.+++++|..+ .+ ++++.+.|.+|+++
T Consensus 345 ~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~ 388 (395)
T PLN02872 345 EHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRS 388 (395)
T ss_pred HHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHH
Confidence 999999987 68889999999633 36 99999999999863
No 53
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.93 E-value=6.9e-24 Score=170.47 Aligned_cols=116 Identities=18% Similarity=0.218 Sum_probs=87.3
Q ss_pred CCcEEEEEEccCCCCCCCceEEEEcCCCCC----CCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHH
Q 038973 47 DGRHVAYREAGVPKEEANHKIIIIHGFGSS----KDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVE 122 (341)
Q Consensus 47 ~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~----~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~ 122 (341)
+|.++.-..+-+.. ..++++|++||++.. ...|..+++.|.++ ||.|+++|+||||.|.... .+++++.+|+.
T Consensus 10 ~~~~l~g~~~~p~~-~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~-G~~v~~~Dl~G~G~S~~~~-~~~~~~~~d~~ 86 (274)
T TIGR03100 10 EGETLVGVLHIPGA-SHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEA-GFPVLRFDYRGMGDSEGEN-LGFEGIDADIA 86 (274)
T ss_pred CCcEEEEEEEcCCC-CCCCeEEEEeCCccccCCchhHHHHHHHHHHHC-CCEEEEeCCCCCCCCCCCC-CCHHHHHHHHH
Confidence 56666655553432 235678888876532 23355667778765 9999999999999987532 46778888888
Q ss_pred HHHHHh-----CCCCcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 123 QLADKL-----QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 123 ~~l~~l-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
++++.+ +. ++++++||||||.+++.++.. +.+|+++|+++|..
T Consensus 87 ~~~~~l~~~~~g~-~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~ 134 (274)
T TIGR03100 87 AAIDAFREAAPHL-RRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWV 134 (274)
T ss_pred HHHHHHHhhCCCC-CcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCcc
Confidence 888877 44 679999999999999998765 56899999999863
No 54
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.91 E-value=6e-23 Score=175.32 Aligned_cols=280 Identities=10% Similarity=-0.027 Sum_probs=155.7
Q ss_pred CCCCceEccCCcEEEEEEccCCCC-CCCceEEEEcCCCCCCCcch-----hhHHHHHHhcCceEEEEcCCCCCCCCCCC-
Q 038973 38 VTSPRIKLSDGRHVAYREAGVPKE-EANHKIIIIHGFGSSKDLNL-----PVSQELIEELKIYFLSFDRPGYGESDPHP- 110 (341)
Q Consensus 38 ~~~~~~~~~~g~~l~~~~~g~~~~-~~~~~vl~~hG~~~~~~~~~-----~~~~~l~~~~~~~vi~~D~~G~G~S~~~~- 110 (341)
.+...+...++ .+..+.+.+..+ ..++|||++||+......|+ .+++.|.++ ||+|+++|++|+|.|....
T Consensus 162 ~Tpg~VV~~~~-~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~q-Gf~V~~iDwrgpg~s~~~~~ 239 (532)
T TIGR01838 162 TTPGAVVFENE-LFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQ-GHTVFVISWRNPDASQADKT 239 (532)
T ss_pred CCCCeEEEECC-cEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHHC-CcEEEEEECCCCCcccccCC
Confidence 34445555444 355555543322 35789999999998888886 789999887 9999999999999886432
Q ss_pred --CCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHHH----HHHhhc-cccccceeeecccccccCCCCCccchh-hh
Q 038973 111 --LRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVY----GCLKYI-PQRLAGASLVVPFVHYWWPCLPANLSR-EA 182 (341)
Q Consensus 111 --~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~----~~a~~~-p~~v~~~il~~~~~~~~~~~~~~~~~~-~~ 182 (341)
+|..+.+.+.+..+++.++. ++++++||||||.++. .+++.+ |++|++++++++..++..++.-..... ..
T Consensus 240 ~ddY~~~~i~~al~~v~~~~g~-~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~ 318 (532)
T TIGR01838 240 FDDYIRDGVIAALEVVEAITGE-KQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEI 318 (532)
T ss_pred hhhhHHHHHHHHHHHHHHhcCC-CCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchh
Confidence 23334455567777777887 8999999999999852 345555 789999999999877543211110000 00
Q ss_pred hhcCcchhhhhHHHhhhchhhhHHhhhccccccccccccc-CCCCCC--chHHHHHHhhcCCCCchhHHhhhhhHHHHHH
Q 038973 183 LQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGN-MDIFSP--PDLEILKKLSESPSEGQEKILQQGIHESLYR 259 (341)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (341)
+. ..+..... ..+++...-.....-+.+........ ...+.. .....+..+..+..... ......+...++.
T Consensus 319 ~~---~~e~~~~~-~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP-~~~~~~~lr~ly~ 393 (532)
T TIGR01838 319 VA---GIERQNGG-GGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLP-GKMHNFYLRNLYL 393 (532)
T ss_pred HH---HHHHHHHh-cCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccch-HHHHHHHHHHHHh
Confidence 00 00000000 00111100000000000000000000 000000 00001111111111101 1111111222222
Q ss_pred HHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC
Q 038973 260 DLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE 327 (341)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 327 (341)
+.... .-.+...+....+.+|++|+++|+|++|.++|.+.+..+.+.+++.+..+++++||.++++
T Consensus 394 ~N~L~--~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ie 459 (532)
T TIGR01838 394 QNALT--TGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVV 459 (532)
T ss_pred cCCCc--CCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhh
Confidence 11111 1112223345568889999999999999999999999999999999999999999999986
No 55
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.91 E-value=8.3e-25 Score=172.80 Aligned_cols=218 Identities=21% Similarity=0.309 Sum_probs=127.7
Q ss_pred ceEEEEcCCCCCCCCC-----CCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 93 IYFLSFDRPGYGESDP-----HPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 93 ~~vi~~D~~G~G~S~~-----~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
|+|+++|+||+|.|++ ...++.+++++++..+++.++. ++++++||||||.+++.+|+.+|++|+++|++++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGI-KKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTT-SSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCC-CCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 6799999999999995 2345899999999999999999 789999999999999999999999999999999851
Q ss_pred cccCCCCCccchhhhhhcCcchhhhhHH----HhhhchhhhHHhhhcccccccccccccCCCCCCchHHH-HHHhhcCCC
Q 038973 168 HYWWPCLPANLSREALQRLPVENQRTFR----IAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEI-LKKLSESPS 242 (341)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 242 (341)
.. ........+............ ............... ... . ............ ........
T Consensus 80 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~---~~~~~~~~~~~~~~~~~~~~~- 146 (230)
T PF00561_consen 80 DL-----PDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQ-FFA---Y---DREFVEDFLKQFQSQQYARFA- 146 (230)
T ss_dssp HH-----HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH---H---HHHHHHTHHHHHHHHHHHHTC-
T ss_pred cc-----hhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhh-eee---c---cCccccchhhccchhhhhHHH-
Confidence 00 000000000000000000000 000000000000000 000 0 000000000000 00000000
Q ss_pred CchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCc
Q 038973 243 EGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGH 322 (341)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH 322 (341)
..................| +....+..+++|+++++|++|.++|++....+.+.+|+.++++++++||
T Consensus 147 -------~~~~~~~~~~~~~~~~~~~-----~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH 214 (230)
T PF00561_consen 147 -------ETDAFDNMFWNALGYFSVW-----DPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPNSQLVLIEGSGH 214 (230)
T ss_dssp -------HHHHHHHHHHHHHHHHHHH-----HHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTTEEEEEETTCCS
T ss_pred -------HHHHHhhhccccccccccc-----cccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCCCEEEECCCCCh
Confidence 0000000000000000011 1222355688889999999999999999999999999999999999999
Q ss_pred ccccC-HHHHHHHHH
Q 038973 323 LFIFE-RKFCEAIIR 336 (341)
Q Consensus 323 ~~~~e-p~~~~~~i~ 336 (341)
+.+.+ |+++.+.|.
T Consensus 215 ~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 215 FAFLEGPDEFNEIII 229 (230)
T ss_dssp THHHHSHHHHHHHHH
T ss_pred HHHhcCHHhhhhhhc
Confidence 99998 999998875
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.91 E-value=1.4e-22 Score=152.88 Aligned_cols=185 Identities=17% Similarity=0.127 Sum_probs=123.4
Q ss_pred ceEEEEcCCCCCCCcchh--hHHHHHHh-cCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEecc
Q 038973 65 HKIIIIHGFGSSKDLNLP--VSQELIEE-LKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISM 141 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~--~~~~l~~~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~ 141 (341)
|+||++||++++...|.. +.+.+.+. .+|+|+++|+||++ ++.++++.+++++++. ++++++||||
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~----------~~~~~~l~~l~~~~~~-~~~~lvG~S~ 70 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP----------ADAAELLESLVLEHGG-DPLGLVGSSL 70 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH----------HHHHHHHHHHHHHcCC-CCeEEEEECH
Confidence 589999999999999984 33444332 26899999999985 3588899999999988 7999999999
Q ss_pred ChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhhcccccccccccc
Q 038973 142 GAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSG 221 (341)
Q Consensus 142 Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (341)
||.+++.+|.++|. ++|+++|... +. .....+ ...
T Consensus 71 Gg~~a~~~a~~~~~---~~vl~~~~~~------~~-~~~~~~-----------------------------~~~------ 105 (190)
T PRK11071 71 GGYYATWLSQCFML---PAVVVNPAVR------PF-ELLTDY-----------------------------LGE------ 105 (190)
T ss_pred HHHHHHHHHHHcCC---CEEEECCCCC------HH-HHHHHh-----------------------------cCC------
Confidence 99999999999983 4688888642 00 000000 000
Q ss_pred cCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHH
Q 038973 222 NMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQI 301 (341)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~ 301 (341)
......... ..+......+.... ++.. +. ..+|+++++|++|.++|.+.
T Consensus 106 ~~~~~~~~~--------------------~~~~~~~~~d~~~~---------~~~~-i~-~~~~v~iihg~~De~V~~~~ 154 (190)
T PRK11071 106 NENPYTGQQ--------------------YVLESRHIYDLKVM---------QIDP-LE-SPDLIWLLQQTGDEVLDYRQ 154 (190)
T ss_pred cccccCCCc--------------------EEEcHHHHHHHHhc---------CCcc-CC-ChhhEEEEEeCCCCcCCHHH
Confidence 000000000 00000000111000 1111 22 45569999999999999999
Q ss_pred HHHHHhhCCCcEEEEecCCCcccccCHHHHHHHHHHHhh
Q 038973 302 NQFISEKLPWIQYHEVPDAGHLFIFERKFCEAIIRALLV 340 (341)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~gH~~~~ep~~~~~~i~~fl~ 340 (341)
+..+.+. ++.++++|++|.+.. .+++.+.+.+|++
T Consensus 155 a~~~~~~---~~~~~~~ggdH~f~~-~~~~~~~i~~fl~ 189 (190)
T PRK11071 155 AVAYYAA---CRQTVEEGGNHAFVG-FERYFNQIVDFLG 189 (190)
T ss_pred HHHHHHh---cceEEECCCCcchhh-HHHhHHHHHHHhc
Confidence 9999884 577788999998832 5778888888874
No 57
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.90 E-value=1.1e-21 Score=163.70 Aligned_cols=266 Identities=11% Similarity=0.048 Sum_probs=143.5
Q ss_pred CCceEEEEcCCCCCCCcc-----hhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHH-HHH----HHHHhCCCC
Q 038973 63 ANHKIIIIHGFGSSKDLN-----LPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACD-VEQ----LADKLQIGS 132 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~-----~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~d-l~~----~l~~l~~~~ 132 (341)
.+++||++||+..+...+ ..+++.|.++ ||+|+++|++|+|.|+. ..++++++.+ +.+ +.+..+. +
T Consensus 61 ~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~-G~~V~~~D~~g~g~s~~--~~~~~d~~~~~~~~~v~~l~~~~~~-~ 136 (350)
T TIGR01836 61 HKTPLLIVYALVNRPYMLDLQEDRSLVRGLLER-GQDVYLIDWGYPDRADR--YLTLDDYINGYIDKCVDYICRTSKL-D 136 (350)
T ss_pred CCCcEEEeccccccceeccCCCCchHHHHHHHC-CCeEEEEeCCCCCHHHh--cCCHHHHHHHHHHHHHHHHHHHhCC-C
Confidence 456899999986655554 5788888876 99999999999998753 2356666533 444 4445566 7
Q ss_pred cEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhhccc
Q 038973 133 KFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMSQKW 212 (341)
Q Consensus 133 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (341)
+++++||||||.+++.+++.+|++|+++|+++++..+...... ...+...... ..........+..........+
T Consensus 137 ~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~p~~~~~~~f~~l 211 (350)
T TIGR01836 137 QISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNM----LSNWARHVDI-DLAVDTMGNIPGELLNLTFLML 211 (350)
T ss_pred cccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCch----hhhhccccCH-HHHHHhcCCCCHHHHHHHHHhc
Confidence 9999999999999999999999999999999988754221100 0001000000 0000000011110000000000
Q ss_pred ccccccccccCC-CCCCchHHHHHHh------hcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCcc
Q 038973 213 FPTLSIMSGNMD-IFSPPDLEILKKL------SESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGS 285 (341)
Q Consensus 213 ~~~~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P 285 (341)
.+.......... .....+.+....+ ..+...... .........+..........+ ........+.++++|
T Consensus 212 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~-~~~~~~~~~~~~~n~l~~g~~--~~~~~~~~l~~i~~P 288 (350)
T TIGR01836 212 KPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAG-EAFRQFVKDFYQQNGLINGEV--EIGGRKVDLKNIKMP 288 (350)
T ss_pred CcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccH-HHHHHHHHHHHhcCcccCCee--EECCEEccHHhCCCC
Confidence 000000000000 0000011111111 111110000 000111111111000000010 001112346678999
Q ss_pred EEEEEeecCCCCChHHHHHHHhhCCC--cEEEEecCCCcccccC----HHHHHHHHHHHhhC
Q 038973 286 VHIWQGCEDRIIPSQINQFISEKLPW--IQYHEVPDAGHLFIFE----RKFCEAIIRALLVR 341 (341)
Q Consensus 286 vlii~g~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e----p~~~~~~i~~fl~~ 341 (341)
+++++|++|.++|++.++.+.+.+++ .++++++ +||..... ++++.+.|.+|+++
T Consensus 289 vliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 289 ILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred eEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 99999999999999999999998864 5677777 68877653 47888899999863
No 58
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.90 E-value=1.6e-23 Score=157.26 Aligned_cols=115 Identities=20% Similarity=0.224 Sum_probs=95.0
Q ss_pred EEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC--CCCccchHHHHHHHHHH
Q 038973 50 HVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP--LRTVKTEACDVEQLADK 127 (341)
Q Consensus 50 ~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~~dl~~~l~~ 127 (341)
++..+..+++ ...+|.++++||++.+.-.|..++.++..+...+|+++|+||||+|...+ +.+.+.++.|+.++++.
T Consensus 61 t~n~Y~t~~~-~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~ 139 (343)
T KOG2564|consen 61 TFNVYLTLPS-ATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKE 139 (343)
T ss_pred eEEEEEecCC-CCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHH
Confidence 3555555553 34678999999999999999999999999888889999999999997433 46999999999999998
Q ss_pred hC--CCCcEEEEEeccChHHHHHHHhh--ccccccceeeeccc
Q 038973 128 LQ--IGSKFYVIGISMGAYPVYGCLKY--IPQRLAGASLVVPF 166 (341)
Q Consensus 128 l~--~~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~~il~~~~ 166 (341)
+- ...+++||||||||.++.+.|.. -|. +.++++++-.
T Consensus 140 ~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 140 LFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred HhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 73 22689999999999999887754 354 8899998864
No 59
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.90 E-value=5.9e-22 Score=143.19 Aligned_cols=224 Identities=18% Similarity=0.211 Sum_probs=158.0
Q ss_pred CCCCCCCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCC
Q 038973 34 GGPPVTSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRT 113 (341)
Q Consensus 34 ~~~~~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~ 113 (341)
.+.+.+.-.+.+.|..+++-...-+ +.+.|+++++||..++.....+++.-+-.+.+.+|+.+++||+|.|+..+.
T Consensus 50 ~n~pye~i~l~T~D~vtL~a~~~~~--E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~Gsps-- 125 (300)
T KOG4391|consen 50 FNMPYERIELRTRDKVTLDAYLMLS--ESSRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPS-- 125 (300)
T ss_pred cCCCceEEEEEcCcceeEeeeeecc--cCCCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCcc--
Confidence 3456677778888988888666543 247899999999999999888888888888899999999999999986552
Q ss_pred ccchHHHHHHHHHHhC----C-CCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcc
Q 038973 114 VKTEACDVEQLADKLQ----I-GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPV 188 (341)
Q Consensus 114 ~~~~~~dl~~~l~~l~----~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (341)
-+-+.-|-+++++++- . ..++++.|-|.||.+|+.+|++..+++.++|+-+++... |....
T Consensus 126 E~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SI-----p~~~i--------- 191 (300)
T KOG4391|consen 126 EEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSI-----PHMAI--------- 191 (300)
T ss_pred ccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccc-----hhhhh---------
Confidence 2223334444555441 1 268999999999999999999999999999999987541 10000
Q ss_pred hhhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhccccc
Q 038973 189 ENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKW 268 (341)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (341)
.-.++ .....+..+ ...+. |
T Consensus 192 ---------------------~~v~p--------------~~~k~i~~l---------------c~kn~----------~ 211 (300)
T KOG4391|consen 192 ---------------------PLVFP--------------FPMKYIPLL---------------CYKNK----------W 211 (300)
T ss_pred ---------------------heecc--------------chhhHHHHH---------------HHHhh----------h
Confidence 00000 000000000 00000 0
Q ss_pred ccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCC--cEEEEecCCCcccccCHHHHHHHHHHHhh
Q 038973 269 EFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPW--IQYHEVPDAGHLFIFERKFCEAIIRALLV 340 (341)
Q Consensus 269 ~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~gH~~~~ep~~~~~~i~~fl~ 340 (341)
.-...+.+.+.|+|+|.|.+|.++|+...+.+.+..|. .++..+|++.|.--+--+-..++|.+|+.
T Consensus 212 -----~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGYfq~i~dFla 280 (300)
T KOG4391|consen 212 -----LSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWICDGYFQAIEDFLA 280 (300)
T ss_pred -----cchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEeccHHHHHHHHHH
Confidence 00111335566799999999999999999999999974 68999999999876656667788888875
No 60
>PRK10566 esterase; Provisional
Probab=99.89 E-value=1.5e-21 Score=155.75 Aligned_cols=100 Identities=22% Similarity=0.204 Sum_probs=72.7
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC-CCCcc-------chHHHHHHHHHHh------
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP-LRTVK-------TEACDVEQLADKL------ 128 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~-~~~~~-------~~~~dl~~~l~~l------ 128 (341)
+.|+||++||++++...|..++..|.++ ||.|+++|+||||.+.... ...+. ...+|+.++++.+
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~-G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVALAQA-GFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWL 104 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHHHhC-CCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 4689999999999998999998888776 9999999999999763211 11211 2234444444433
Q ss_pred CCCCcEEEEEeccChHHHHHHHhhccccccceeeec
Q 038973 129 QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVV 164 (341)
Q Consensus 129 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~ 164 (341)
+. ++++++|||+||.+++.++.++|+....+++++
T Consensus 105 ~~-~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 105 LD-DRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred Cc-cceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 23 689999999999999999998886333344433
No 61
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.88 E-value=4.1e-21 Score=144.15 Aligned_cols=211 Identities=22% Similarity=0.254 Sum_probs=145.9
Q ss_pred CCCCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccc
Q 038973 37 PVTSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKT 116 (341)
Q Consensus 37 ~~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 116 (341)
..+-..+.+..|..+.-...-++. ...++++++||...+......+...|....+++|+++|++|+|.|...+.. ..
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~-~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE--~n 110 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPE-AAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSE--RN 110 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCcc-ccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCccc--cc
Confidence 334445556566655544443432 345899999999777666666667777767899999999999999864422 14
Q ss_pred hHHHHHHHHHHh----CCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhh
Q 038973 117 EACDVEQLADKL----QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQR 192 (341)
Q Consensus 117 ~~~dl~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (341)
..+|+.++.+.+ |..++++|+|+|+|+..++.+|.+.| ++++|+.+|..+..
T Consensus 111 ~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~---------------------- 166 (258)
T KOG1552|consen 111 LYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGM---------------------- 166 (258)
T ss_pred chhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhh----------------------
Confidence 445555544443 32379999999999999999999998 99999999975310
Q ss_pred hHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCC
Q 038973 193 TFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDP 272 (341)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (341)
+..++.... . |.++.
T Consensus 167 -----------------rv~~~~~~~-----------------------------------------------~-~~~d~ 181 (258)
T KOG1552|consen 167 -----------------RVAFPDTKT-----------------------------------------------T-YCFDA 181 (258)
T ss_pred -----------------hhhccCcce-----------------------------------------------E-Eeecc
Confidence 000000000 0 00011
Q ss_pred CCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCCc-EEEEecCCCcccccCHHHHHHHHHHHh
Q 038973 273 TDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWI-QYHEVPDAGHLFIFERKFCEAIIRALL 339 (341)
Q Consensus 273 ~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~-~~~~~~~~gH~~~~ep~~~~~~i~~fl 339 (341)
......++.|+||+|++||++|.++|.....++.+..++. +-.+++|+||.-..-..++.+.+..|+
T Consensus 182 f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~yi~~l~~f~ 249 (258)
T KOG1552|consen 182 FPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEYIEHLRRFI 249 (258)
T ss_pred ccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCHHHHHHHHHHH
Confidence 1112336778889999999999999999999999999875 888999999988765445556666665
No 62
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.88 E-value=1.1e-20 Score=176.99 Aligned_cols=265 Identities=12% Similarity=0.051 Sum_probs=144.4
Q ss_pred CCceEEEEcCCCCCCCcchhh-----HHHHHHhcCceEEEEcCCCCCCCCCCCC---CCccchHHHHHHHHHH---hCCC
Q 038973 63 ANHKIIIIHGFGSSKDLNLPV-----SQELIEELKIYFLSFDRPGYGESDPHPL---RTVKTEACDVEQLADK---LQIG 131 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~-----~~~l~~~~~~~vi~~D~~G~G~S~~~~~---~~~~~~~~dl~~~l~~---l~~~ 131 (341)
.+++|||+||++.+...|+.. ++.|.++ ||+|+++|+ |.++.+.. .++.+++..+.+.++. +..
T Consensus 66 ~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~-g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~- 140 (994)
T PRK07868 66 VGPPVLMVHPMMMSADMWDVTRDDGAVGILHRA-GLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTG- 140 (994)
T ss_pred CCCcEEEECCCCCCccceecCCcccHHHHHHHC-CCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhC-
Confidence 568999999999999999965 7788776 899999995 66654433 3555555555555543 334
Q ss_pred CcEEEEEeccChHHHHHHHhhc-cccccceeeecccccccCCCCCccchhhh--hhcCcchhhhhHHHhhhchhhhHHh-
Q 038973 132 SKFYVIGISMGAYPVYGCLKYI-PQRLAGASLVVPFVHYWWPCLPANLSREA--LQRLPVENQRTFRIAYYFPWLLNLW- 207 (341)
Q Consensus 132 ~~~~lvGhS~Gg~~a~~~a~~~-p~~v~~~il~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~- 207 (341)
++++++||||||.+++.+++.+ +++|+++|++++..++...... ...... ............. ...+.+....
T Consensus 141 ~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~ 217 (994)
T PRK07868 141 RDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPM-GIPAGLAAAAADFMADHVFNR--LDIPGWMARTG 217 (994)
T ss_pred CceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcc-cchhhhhhcccccchhhhhhc--CCCCHHHHHHH
Confidence 6899999999999999998755 5689999999988654221100 000000 0000000000000 0011000000
Q ss_pred h--------hcccccccccccccCCCCCCchHHHHHHhhcCCCC-chhHHhhhhhHHHHHHHHhhcccccccCCCCCCCC
Q 038973 208 M--------SQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSE-GQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINP 278 (341)
Q Consensus 208 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (341)
+ ............ ..... .+.+....+...... .........+...+..........+ ....-...
T Consensus 218 ~~~l~p~~~~~~~~~~~~~l~-~~~~~--~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~--~~~~~~~~ 292 (994)
T PRK07868 218 FQMLDPVKTAKARVDFLRQLH-DREAL--LPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGF--AINGQMVT 292 (994)
T ss_pred HHhcChhHHHHHHHHHHHhcC-chhhh--ccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceE--EECCEEcc
Confidence 0 000000000000 00000 000111111110000 0000011111111111000000000 11111234
Q ss_pred CCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEE-EEecCCCcccccC----HHHHHHHHHHHhh
Q 038973 279 FPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQY-HEVPDAGHLFIFE----RKFCEAIIRALLV 340 (341)
Q Consensus 279 ~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~-~~~~~~gH~~~~e----p~~~~~~i~~fl~ 340 (341)
+.+|++|+|+|+|++|.++|++.++.+.+.+|++++ .+++++||+.++- ++++...|.+||+
T Consensus 293 L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~ 359 (994)
T PRK07868 293 LADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVK 359 (994)
T ss_pred hhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHH
Confidence 788999999999999999999999999999999987 6889999998772 8888999999986
No 63
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.87 E-value=6.5e-20 Score=148.26 Aligned_cols=265 Identities=22% Similarity=0.234 Sum_probs=153.3
Q ss_pred CCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhc-CceEEEEcCCCCCCCCCCCCCCccchHHHHHHHH
Q 038973 47 DGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEEL-KIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLA 125 (341)
Q Consensus 47 ~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l 125 (341)
.+..+.|...+.+ .++++++||++++...|......+.... .|+|+.+|+||||.|... .++....++++..++
T Consensus 8 ~~~~~~~~~~~~~----~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~-~~~~~~~~~~~~~~~ 82 (282)
T COG0596 8 DGVRLAYREAGGG----GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPA-GYSLSAYADDLAALL 82 (282)
T ss_pred CCeEEEEeecCCC----CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCCcc-cccHHHHHHHHHHHH
Confidence 4566777777654 4599999999999999988433443321 288999999999999711 234555599999999
Q ss_pred HHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhc--hhh
Q 038973 126 DKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYF--PWL 203 (341)
Q Consensus 126 ~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 203 (341)
++++. .+++++|||+||.+++.++.++|++++++|++++............. ................. ...
T Consensus 83 ~~~~~-~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 156 (282)
T COG0596 83 DALGL-EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQ-----PAGAAPLAALADLLLGLDAAAF 156 (282)
T ss_pred HHhCC-CceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCcccc-----Cccccchhhhhhhhhccchhhh
Confidence 99998 67999999999999999999999999999999986431000000000 00000000000000000 000
Q ss_pred hHHhhhccccccccccc--ccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCC-CCCCCCC
Q 038973 204 LNLWMSQKWFPTLSIMS--GNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPT-DLINPFP 280 (341)
Q Consensus 204 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 280 (341)
........+........ ................ .............. ..... .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 218 (282)
T COG0596 157 AALLAALGLLAALAAAARAGLAEALRAPLLGAAAA----------------AFARAARADLAAAL--LALLDRDLRAALA 218 (282)
T ss_pred hhhhhcccccccccccchhccccccccccchhHhh----------------hhhhhcccccchhh--hcccccccchhhc
Confidence 00000000000000000 0000000000000000 00000000000000 00000 2334467
Q ss_pred CCCccEEEEEeecCCCCChHHHHHHHhhCCC-cEEEEecCCCcccccC-HHHHHHHHHHHhh
Q 038973 281 DNEGSVHIWQGCEDRIIPSQINQFISEKLPW-IQYHEVPDAGHLFIFE-RKFCEAIIRALLV 340 (341)
Q Consensus 281 ~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 340 (341)
.+++|+++++|++|.+.|......+.+..++ .++.+++++||+++.+ |+.+.+.+.+|++
T Consensus 219 ~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 219 RITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred cCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 7889999999999977777667788888885 9999999999999999 9999988888554
No 64
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.87 E-value=2.3e-21 Score=141.44 Aligned_cols=142 Identities=24% Similarity=0.365 Sum_probs=110.0
Q ss_pred eEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHH-H-HhCCCCcEEEEEeccCh
Q 038973 66 KIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLA-D-KLQIGSKFYVIGISMGA 143 (341)
Q Consensus 66 ~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l-~-~l~~~~~~~lvGhS~Gg 143 (341)
+||++||++++...|..+.+.|.++ ||.|+.+|+|++|.+... +.++++.+.+ + ..+. ++++++|||+||
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~-~~i~l~G~S~Gg 72 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQ-GYAVVAFDYPGHGDSDGA------DAVERVLADIRAGYPDP-DRIILIGHSMGG 72 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHT-TEEEEEESCTTSTTSHHS------HHHHHHHHHHHHHHCTC-CEEEEEEETHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHC-CCEEEEEecCCCCccchh------HHHHHHHHHHHhhcCCC-CcEEEEEEccCc
Confidence 5899999999999999999999987 999999999999988321 1222222222 1 1355 799999999999
Q ss_pred HHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhhcccccccccccccC
Q 038973 144 YPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNM 223 (341)
Q Consensus 144 ~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (341)
.+++.++.++ .+++++|++++...
T Consensus 73 ~~a~~~~~~~-~~v~~~v~~~~~~~------------------------------------------------------- 96 (145)
T PF12695_consen 73 AIAANLAARN-PRVKAVVLLSPYPD------------------------------------------------------- 96 (145)
T ss_dssp HHHHHHHHHS-TTESEEEEESESSG-------------------------------------------------------
T ss_pred HHHHHHhhhc-cceeEEEEecCccc-------------------------------------------------------
Confidence 9999999988 68999999997210
Q ss_pred CCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHH
Q 038973 224 DIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQ 303 (341)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~ 303 (341)
...+...++|+++++|++|..+|.+..+
T Consensus 97 ----------------------------------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~ 124 (145)
T PF12695_consen 97 ----------------------------------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVR 124 (145)
T ss_dssp ----------------------------------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHH
T ss_pred ----------------------------------------------------hhhhhccCCcEEEEEECCCCcCCHHHHH
Confidence 0001223335999999999999999999
Q ss_pred HHHhhCC-CcEEEEecCCCcc
Q 038973 304 FISEKLP-WIQYHEVPDAGHL 323 (341)
Q Consensus 304 ~~~~~~~-~~~~~~~~~~gH~ 323 (341)
.+.+.++ +.++++++|++|+
T Consensus 125 ~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 125 RLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HHHHHHCSSEEEEEETTS-TT
T ss_pred HHHHHcCCCcEEEEeCCCcCc
Confidence 9988887 5899999999996
No 65
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.86 E-value=4.7e-20 Score=133.29 Aligned_cols=217 Identities=17% Similarity=0.131 Sum_probs=134.9
Q ss_pred CceEEEEcCCCCCCCc-c-hhhHHHHHHhcCceEEEEcCCCCCCCCCCCCC-CccchHHHHHHHHHHhCCCCc--EEEEE
Q 038973 64 NHKIIIIHGFGSSKDL-N-LPVSQELIEELKIYFLSFDRPGYGESDPHPLR-TVKTEACDVEQLADKLQIGSK--FYVIG 138 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~-~-~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~dl~~~l~~l~~~~~--~~lvG 138 (341)
...+|++||+-++... + ..++..+.+ .|+.++.+|++|.|+|+..-.+ .....++|+..+++++.-..+ -+++|
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~-~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~g 111 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEK-EGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVILG 111 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHh-cCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEEEe
Confidence 3589999999887543 3 345555554 5999999999999999876654 566778999999999843122 46889
Q ss_pred eccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhhccccccccc
Q 038973 139 ISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSI 218 (341)
Q Consensus 139 hS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (341)
||-||-+++.+|.++++ ++-+|-+++-.... .... .+..+....+.....+......
T Consensus 112 HSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~----------~~I~------------eRlg~~~l~~ike~Gfid~~~r 168 (269)
T KOG4667|consen 112 HSKGGDVVLLYASKYHD-IRNVINCSGRYDLK----------NGIN------------ERLGEDYLERIKEQGFIDVGPR 168 (269)
T ss_pred ecCccHHHHHHHHhhcC-chheEEcccccchh----------cchh------------hhhcccHHHHHHhCCceecCcc
Confidence 99999999999999987 77777776643210 0000 0000111111111111111111
Q ss_pred ccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCC
Q 038973 219 MSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIP 298 (341)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p 298 (341)
.......+++ ..+...+..+.... ++--..+||||-+||..|.++|
T Consensus 169 kG~y~~rvt~----------------------eSlmdrLntd~h~a------------clkId~~C~VLTvhGs~D~IVP 214 (269)
T KOG4667|consen 169 KGKYGYRVTE----------------------ESLMDRLNTDIHEA------------CLKIDKQCRVLTVHGSEDEIVP 214 (269)
T ss_pred cCCcCceecH----------------------HHHHHHHhchhhhh------------hcCcCccCceEEEeccCCceee
Confidence 1111111111 11111111111111 0111256789999999999999
Q ss_pred hHHHHHHHhhCCCcEEEEecCCCcccccCHHHHHHHHHHH
Q 038973 299 SQINQFISEKLPWIQYHEVPDAGHLFIFERKFCEAIIRAL 338 (341)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~ep~~~~~~i~~f 338 (341)
.+.+.++++.+|+-++.+++|+.|.......+...+...|
T Consensus 215 ve~AkefAk~i~nH~L~iIEgADHnyt~~q~~l~~lgl~f 254 (269)
T KOG4667|consen 215 VEDAKEFAKIIPNHKLEIIEGADHNYTGHQSQLVSLGLEF 254 (269)
T ss_pred chhHHHHHHhccCCceEEecCCCcCccchhhhHhhhccee
Confidence 9999999999999999999999998876544444444333
No 66
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.85 E-value=2.7e-19 Score=141.51 Aligned_cols=286 Identities=17% Similarity=0.165 Sum_probs=158.4
Q ss_pred CCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchh-------hHHHHHH------hcCceEEEEcCCCCC-CCCCCC--
Q 038973 47 DGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLP-------VSQELIE------ELKIYFLSFDRPGYG-ESDPHP-- 110 (341)
Q Consensus 47 ~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~-------~~~~l~~------~~~~~vi~~D~~G~G-~S~~~~-- 110 (341)
++..+.|+.+|..+......||++||+.++...... +.+.+.. ...|.||+.|-.|.+ .|+.|.
T Consensus 34 ~~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~ 113 (368)
T COG2021 34 SDARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSI 113 (368)
T ss_pred cCcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCc
Confidence 457899999998877667899999999986443331 2333322 226899999999876 444322
Q ss_pred ------------CCCccchHHHHHHHHHHhCCCCcEE-EEEeccChHHHHHHHhhccccccceeeecccccccCCCCCcc
Q 038973 111 ------------LRTVKTEACDVEQLADKLQIGSKFY-VIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPAN 177 (341)
Q Consensus 111 ------------~~~~~~~~~dl~~~l~~l~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~ 177 (341)
..+++|++..-..++++||+ +++. +||-||||+.++.++..||++|+++|.+++............
T Consensus 114 ~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI-~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~ 192 (368)
T COG2021 114 NPGGKPYGSDFPVITIRDMVRAQRLLLDALGI-KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFN 192 (368)
T ss_pred CCCCCccccCCCcccHHHHHHHHHHHHHhcCc-ceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHH
Confidence 13677888877889999999 6666 999999999999999999999999999998653210000000
Q ss_pred chhhhhhcCcc-h----------hhhhHHHhhhchhhhH---HhhhcccccccccccccCCCCCCchHHHHHHhhcCCCC
Q 038973 178 LSREALQRLPV-E----------NQRTFRIAYYFPWLLN---LWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSE 243 (341)
Q Consensus 178 ~~~~~~~~~~~-~----------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (341)
........... . ......+.+.+..+.. ..+..+ |.... ...+.... ........+...
T Consensus 193 ~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~r-F~r~~--~~~~~~~~-~~~f~vESYL~~--- 265 (368)
T COG2021 193 EVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDER-FGRRL--QADPLRGG-GVRFAVESYLDY--- 265 (368)
T ss_pred HHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHH-hcccc--cccccCCC-chhHHHHHHHHH---
Confidence 00000000000 0 0000011111100000 000000 00000 00000000 000111111100
Q ss_pred chhHHhhhhhHHHHHHHHhhccccccc--CCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcE-EEEe-cC
Q 038973 244 GQEKILQQGIHESLYRDLKTGYAKWEF--DPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQ-YHEV-PD 319 (341)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~-~~~~-~~ 319 (341)
........+..+-+-.+......+.. ...++...+.++++|++++.-+.|..+|++..+++.+.++.+. ++++ ..
T Consensus 266 -qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~ 344 (368)
T COG2021 266 -QGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSP 344 (368)
T ss_pred -HHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCC
Confidence 00000000000001011111111101 1123334478899999999999999999999999999998766 6444 45
Q ss_pred CCcccccC-HHHHHHHHHHHhhC
Q 038973 320 AGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 320 ~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
.||..++. .+.+...|..||+.
T Consensus 345 ~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 345 YGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred CCchhhhcchhhhhHHHHHHhhc
Confidence 89988876 88899999999863
No 67
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.84 E-value=2.4e-19 Score=139.41 Aligned_cols=275 Identities=15% Similarity=0.104 Sum_probs=146.7
Q ss_pred CCCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCC-cch-hhHHHHHHhcCceEEEEcCCCCCCCCC-CCCCCc
Q 038973 38 VTSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKD-LNL-PVSQELIEELKIYFLSFDRPGYGESDP-HPLRTV 114 (341)
Q Consensus 38 ~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~-~~~-~~~~~l~~~~~~~vi~~D~~G~G~S~~-~~~~~~ 114 (341)
.....+.+.||..+-......+....+|.||++||+.|++. .|. .+.+.+.++ ||.|+++|+|||+.+.. .+...-
T Consensus 49 ~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~r-g~~~Vv~~~Rgcs~~~n~~p~~yh 127 (345)
T COG0429 49 YTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRR-GWLVVVFHFRGCSGEANTSPRLYH 127 (345)
T ss_pred cceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhc-CCeEEEEecccccCCcccCcceec
Confidence 35558888888777766666666667789999999976643 344 555666665 99999999999998864 222222
Q ss_pred cchHHHHHHHHHHh---CCCCcEEEEEeccCh-HHHHHHHhhcc-ccccceeeecccccccCCCCCccchhhhhhcCcch
Q 038973 115 KTEACDVEQLADKL---QIGSKFYVIGISMGA-YPVYGCLKYIP-QRLAGASLVVPFVHYWWPCLPANLSREALQRLPVE 189 (341)
Q Consensus 115 ~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg-~~a~~~a~~~p-~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (341)
.-..+|+..+++++ ....++..+|.|+|| +++..++..-. -.+.+.+.++.+.+. ......+......
T Consensus 128 ~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl-------~~~~~~l~~~~s~ 200 (345)
T COG0429 128 SGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDL-------EACAYRLDSGFSL 200 (345)
T ss_pred ccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHH-------HHHHHHhcCchhh
Confidence 33347777777665 334799999999999 55554444322 146666666654331 0000001000000
Q ss_pred hhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccc
Q 038973 190 NQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWE 269 (341)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (341)
....+............++ ... .........+.++.+................+........
T Consensus 201 ----~ly~r~l~~~L~~~~~~kl----~~l---~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr------- 262 (345)
T COG0429 201 ----RLYSRYLLRNLKRNAARKL----KEL---EPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYR------- 262 (345)
T ss_pred ----hhhHHHHHHHHHHHHHHHH----Hhc---CcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHH-------
Confidence 0000000000000000000 000 0111111112222111000000000000000000000000
Q ss_pred cCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHh-hCCCcEEEEecCCCcccccC-----HH-HHHHHHHHHhh
Q 038973 270 FDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISE-KLPWIQYHEVPDAGHLFIFE-----RK-FCEAIIRALLV 340 (341)
Q Consensus 270 ~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~-~~~~~~~~~~~~~gH~~~~e-----p~-~~~~~i~~fl~ 340 (341)
.. .-..-+++|.+|+|||++.+|++++++..-.... ..|++.+.+-+.+||..++. |. ...+.+.+|++
T Consensus 263 -~a-Ss~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~ 338 (345)
T COG0429 263 -QA-SSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLD 338 (345)
T ss_pred -hc-cccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHH
Confidence 00 1112378899999999999999999977766655 77899999999999987764 22 55667777764
No 68
>PRK11460 putative hydrolase; Provisional
Probab=99.84 E-value=2.8e-19 Score=139.75 Aligned_cols=172 Identities=17% Similarity=0.112 Sum_probs=115.3
Q ss_pred CCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCC------------CC---ccchHHHHHHHH
Q 038973 61 EEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPL------------RT---VKTEACDVEQLA 125 (341)
Q Consensus 61 ~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~------------~~---~~~~~~dl~~~l 125 (341)
.+.+++||++||++++...|.++.+.|... ++.+..++.+|...+..... .. +.+..+.+.+++
T Consensus 13 ~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~-~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 13 KPAQQLLLLFHGVGDNPVAMGEIGSWFAPA-FPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCCcEEEEEeCCCCChHHHHHHHHHHHHH-CCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 345689999999999999999999999775 44455555555432211110 01 112222233333
Q ss_pred H----HhCC-CCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhc
Q 038973 126 D----KLQI-GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYF 200 (341)
Q Consensus 126 ~----~l~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (341)
+ ..++ .++++++|||+||.+++.++..+|+.+.+++.+++...
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~-------------------------------- 139 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA-------------------------------- 139 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc--------------------------------
Confidence 3 3343 25899999999999999999999987787777665210
Q ss_pred hhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCC
Q 038973 201 PWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFP 280 (341)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (341)
. ... ..
T Consensus 140 -----------------------~-~~~--------------------------------------------------~~ 145 (232)
T PRK11460 140 -----------------------S-LPE--------------------------------------------------TA 145 (232)
T ss_pred -----------------------c-ccc--------------------------------------------------cc
Confidence 0 000 00
Q ss_pred CCCccEEEEEeecCCCCChHHHHHHHhhCC----CcEEEEecCCCcccccC-HHHHHHHHHHHh
Q 038973 281 DNEGSVHIWQGCEDRIIPSQINQFISEKLP----WIQYHEVPDAGHLFIFE-RKFCEAIIRALL 339 (341)
Q Consensus 281 ~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl 339 (341)
..++|+++++|++|.++|.+.++++.+.+. ++++++++++||.+..+ -+...+.+..++
T Consensus 146 ~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 146 PTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred cCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 113459999999999999999988887763 46888999999998765 555555555554
No 69
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.83 E-value=6e-19 Score=131.76 Aligned_cols=219 Identities=17% Similarity=0.152 Sum_probs=148.0
Q ss_pred CCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCC-CCCCCCccchHHHHHHHHHHhCCCCcEEEEEec
Q 038973 62 EANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESD-PHPLRTVKTEACDVEQLADKLQIGSKFYVIGIS 140 (341)
Q Consensus 62 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~-~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS 140 (341)
+.+..++++|-.|+++..|+.+...|.. .+.++++++||+|.-- .+.-.+++++++.|...+...-.++++.++|||
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp~--~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHS 82 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLPA--DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHS 82 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCCc--hhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccc
Confidence 3567899999999999999999888876 4779999999999763 444568999999988888732233799999999
Q ss_pred cChHHHHHHHhhccc---cccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhhcccccccc
Q 038973 141 MGAYPVYGCLKYIPQ---RLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLS 217 (341)
Q Consensus 141 ~Gg~~a~~~a~~~p~---~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (341)
|||++|.++|.+... ...++.+.+...+. ..
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP~-------~~--------------------------------------- 116 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAPH-------YD--------------------------------------- 116 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCCC-------Cc---------------------------------------
Confidence 999999999976432 25566666654320 00
Q ss_pred cccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhH----HHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeec
Q 038973 218 IMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIH----ESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCE 293 (341)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~ 293 (341)
.........+.+.+..+.+.............+. ..++.+..... .+ .. .+-..++||+.++.|++
T Consensus 117 ---~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e-~Y-----~~-~~~~pl~~pi~~~~G~~ 186 (244)
T COG3208 117 ---RGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRALE-SY-----RY-PPPAPLACPIHAFGGEK 186 (244)
T ss_pred ---ccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhc-cc-----cc-CCCCCcCcceEEeccCc
Confidence 0111122233344444333333322222222222 22333222111 11 11 22356888899999999
Q ss_pred CCCCChHHHHHHHhhCC-CcEEEEecCCCcccccC-HHHHHHHHHHHh
Q 038973 294 DRIIPSQINQFISEKLP-WIQYHEVPDAGHLFIFE-RKFCEAIIRALL 339 (341)
Q Consensus 294 D~~~p~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl 339 (341)
|..+..+....+.+... ..++++++| ||+...+ .+++...|.+.+
T Consensus 187 D~~vs~~~~~~W~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l 233 (244)
T COG3208 187 DHEVSRDELGAWREHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQHL 233 (244)
T ss_pred chhccHHHHHHHHHhhcCCceEEEecC-cceehhhhHHHHHHHHHHHh
Confidence 99999999998998886 579999995 9999998 888888887766
No 70
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.83 E-value=1.4e-19 Score=142.25 Aligned_cols=123 Identities=13% Similarity=0.065 Sum_probs=93.2
Q ss_pred ceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCC----cchhhHHHHHHhcCceEEEEcCCCCCCCCCCC-CCCccc
Q 038973 42 RIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKD----LNLPVSQELIEELKIYFLSFDRPGYGESDPHP-LRTVKT 116 (341)
Q Consensus 42 ~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~----~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~-~~~~~~ 116 (341)
+++...|..+ ...+.+..+..+++||++||+++... .|..+++.|.+. ||.|+++|+||||.|.... ..+++.
T Consensus 4 ~l~~~~g~~~-~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~-Gy~Vl~~Dl~G~G~S~g~~~~~~~~~ 81 (266)
T TIGR03101 4 FLDAPHGFRF-CLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAG-GFGVLQIDLYGCGDSAGDFAAARWDV 81 (266)
T ss_pred EecCCCCcEE-EEEecCCCCCCceEEEEECCCcccccchhHHHHHHHHHHHHC-CCEEEEECCCCCCCCCCccccCCHHH
Confidence 4455556544 33333333234678999999987543 455667777765 9999999999999997533 347778
Q ss_pred hHHHHHHHHHH---hCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 117 EACDVEQLADK---LQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 117 ~~~dl~~~l~~---l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
+++|+..+++. .+. ++++++||||||.+++.++.++|++++++|+++|..
T Consensus 82 ~~~Dv~~ai~~L~~~~~-~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 82 WKEDVAAAYRWLIEQGH-PPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred HHHHHHHHHHHHHhcCC-CCEEEEEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 88888776554 455 799999999999999999999999999999999875
No 71
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.82 E-value=5.3e-18 Score=136.53 Aligned_cols=120 Identities=16% Similarity=0.145 Sum_probs=88.6
Q ss_pred CCcEEEEEEccCCC--CCCCceEEEEcCCCCCCCcchh--hHHHHHHhcCceEEEEcC--CCCCCCCCCC----------
Q 038973 47 DGRHVAYREAGVPK--EEANHKIIIIHGFGSSKDLNLP--VSQELIEELKIYFLSFDR--PGYGESDPHP---------- 110 (341)
Q Consensus 47 ~g~~l~~~~~g~~~--~~~~~~vl~~hG~~~~~~~~~~--~~~~l~~~~~~~vi~~D~--~G~G~S~~~~---------- 110 (341)
.+..+.|..+.|+. ..+.|+|+++||++++...|.. .+..++++.|+.|+++|. +|+|.+....
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~ 102 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGF 102 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccc
Confidence 46677788886642 2356899999999999888863 345677667999999998 5555332100
Q ss_pred -----------CCCcc-chHHHHHHHHHH---hCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 111 -----------LRTVK-TEACDVEQLADK---LQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 111 -----------~~~~~-~~~~dl~~~l~~---l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
.++.. .+++++..+++. ++. ++++++||||||.+++.++.++|+.+++++++++..
T Consensus 103 ~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 103 YVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDG-ERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred cccCCcCcccccchHHHHHHHHHHHHHHhhCCCCC-CceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 11222 235677777776 344 689999999999999999999999999999998864
No 72
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.80 E-value=2.5e-18 Score=152.88 Aligned_cols=230 Identities=18% Similarity=0.086 Sum_probs=143.3
Q ss_pred CCCCCCceEccCCcEEEEEEccCCCCCC---CceEEEEcCCCCCCCc--chhhHHHHHHhcCceEEEEcCCCCCCCCC--
Q 038973 36 PPVTSPRIKLSDGRHVAYREAGVPKEEA---NHKIIIIHGFGSSKDL--NLPVSQELIEELKIYFLSFDRPGYGESDP-- 108 (341)
Q Consensus 36 ~~~~~~~~~~~~g~~l~~~~~g~~~~~~---~~~vl~~hG~~~~~~~--~~~~~~~l~~~~~~~vi~~D~~G~G~S~~-- 108 (341)
...+...+...||.+++.+...|...+. -|+||++||.+..... |......|+.+ ||.|+.+|.||.+.-..
T Consensus 363 ~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~-G~~V~~~n~RGS~GyG~~F 441 (620)
T COG1506 363 AEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASA-GYAVLAPNYRGSTGYGREF 441 (620)
T ss_pred CCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcC-CeEEEEeCCCCCCccHHHH
Confidence 4446667777799999999887654332 2899999999866544 55666777776 99999999998765321
Q ss_pred ---CC----CCCccchHHHHHHHHHHhCC--CCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccch
Q 038973 109 ---HP----LRTVKTEACDVEQLADKLQI--GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLS 179 (341)
Q Consensus 109 ---~~----~~~~~~~~~dl~~~l~~l~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~ 179 (341)
.. ....+++.+.+. +++..+. .+++++.|||+||.+++..+.+.| .+++.+...+.+..
T Consensus 442 ~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~---------- 509 (620)
T COG1506 442 ADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDW---------- 509 (620)
T ss_pred HHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchh----------
Confidence 11 124444444444 4444332 158999999999999999999888 78888777765421
Q ss_pred hhhhhcCcchhhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHH
Q 038973 180 REALQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYR 259 (341)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (341)
......... .+...... ....... +.+.+...
T Consensus 510 -------------~~~~~~~~~---------~~~~~~~~---~~~~~~~-~~~~~~~~---------------------- 541 (620)
T COG1506 510 -------------LLYFGESTE---------GLRFDPEE---NGGGPPE-DREKYEDR---------------------- 541 (620)
T ss_pred -------------hhhccccch---------hhcCCHHH---hCCCccc-ChHHHHhc----------------------
Confidence 000000000 00000000 0000000 00000000
Q ss_pred HHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhC----CCcEEEEecCCCccccc-C-HHHHHH
Q 038973 260 DLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKL----PWIQYHEVPDAGHLFIF-E-RKFCEA 333 (341)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~----~~~~~~~~~~~gH~~~~-e-p~~~~~ 333 (341)
+.+. -..++++|+|+|||++|..||.+.+.++.+.+ ..++++++|+.+|.+.. + ...+.+
T Consensus 542 -------------sp~~-~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~ 607 (620)
T COG1506 542 -------------SPIF-YADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLK 607 (620)
T ss_pred -------------Chhh-hhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHH
Confidence 0011 14567777999999999999999998887776 35799999999998877 3 455555
Q ss_pred HHHHHhh
Q 038973 334 IIRALLV 340 (341)
Q Consensus 334 ~i~~fl~ 340 (341)
.+.+|++
T Consensus 608 ~~~~~~~ 614 (620)
T COG1506 608 EILDWFK 614 (620)
T ss_pred HHHHHHH
Confidence 6666654
No 73
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.80 E-value=1.8e-17 Score=133.93 Aligned_cols=130 Identities=18% Similarity=0.214 Sum_probs=91.9
Q ss_pred CCCCCCCceEccCCcEEEEEEccCCCC------CCCceEEEEcCCCCCCC-cch-hhHHHHHHhcCceEEEEcCCCCCCC
Q 038973 35 GPPVTSPRIKLSDGRHVAYREAGVPKE------EANHKIIIIHGFGSSKD-LNL-PVSQELIEELKIYFLSFDRPGYGES 106 (341)
Q Consensus 35 ~~~~~~~~~~~~~g~~l~~~~~g~~~~------~~~~~vl~~hG~~~~~~-~~~-~~~~~l~~~~~~~vi~~D~~G~G~S 106 (341)
...+++..+++.||..+.+...-++.. ...|.||++||+.+++. .|- .++..+. +.||+|+.++.||+|.|
T Consensus 90 ~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~-~~G~r~VVfN~RG~~g~ 168 (409)
T KOG1838|consen 90 PVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQ-RKGYRVVVFNHRGLGGS 168 (409)
T ss_pred CCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHH-hCCcEEEEECCCCCCCC
Confidence 355678889999999999987744433 45699999999976654 333 4444444 44999999999999998
Q ss_pred CCCC-CCCccchHHHHHHHHHHhC---CCCcEEEEEeccChHHHHHHHhhccc--cccceeeecc
Q 038973 107 DPHP-LRTVKTEACDVEQLADKLQ---IGSKFYVIGISMGAYPVYGCLKYIPQ--RLAGASLVVP 165 (341)
Q Consensus 107 ~~~~-~~~~~~~~~dl~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~~il~~~ 165 (341)
.-.. ..--..+.+|+.++++++. +..+...+|.||||.+.+.|.....+ .+.+.+.++.
T Consensus 169 ~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~ 233 (409)
T KOG1838|consen 169 KLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCN 233 (409)
T ss_pred ccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEec
Confidence 7433 2233445677777777663 33689999999999999999876543 2444444443
No 74
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.80 E-value=1.3e-17 Score=127.22 Aligned_cols=112 Identities=24% Similarity=0.271 Sum_probs=97.1
Q ss_pred EEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC--CCCccchHHHHHHHHHHhCC
Q 038973 53 YREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP--LRTVKTEACDVEQLADKLQI 130 (341)
Q Consensus 53 ~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~~dl~~~l~~l~~ 130 (341)
|....+ .+++..+||-+||.+++...|..+.+.|.+. |+++|.+++||+|.++.++ .++-.+...-+.++++.+++
T Consensus 25 y~D~~~-~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~-~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i 102 (297)
T PF06342_consen 25 YEDSLP-SGSPLGTVVAFHGSPGSHNDFKYIRPPLDEA-GIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGI 102 (297)
T ss_pred EEecCC-CCCCceeEEEecCCCCCccchhhhhhHHHHc-CeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCC
Confidence 555433 3345569999999999999999998888776 9999999999999998765 45888889999999999999
Q ss_pred CCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 131 GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 131 ~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
+++++.+|||.|+-.|+.++..+| ..++++++|...
T Consensus 103 ~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 103 KGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred CCceEEEEeccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 889999999999999999999986 679999999754
No 75
>PLN02442 S-formylglutathione hydrolase
Probab=99.79 E-value=1e-17 Score=135.07 Aligned_cols=120 Identities=18% Similarity=0.141 Sum_probs=83.0
Q ss_pred CCcEEEEEEccCCC--CCCCceEEEEcCCCCCCCcchhhH--HHHHHhcCceEEEEcCCCCCC-----CCC------CC-
Q 038973 47 DGRHVAYREAGVPK--EEANHKIIIIHGFGSSKDLNLPVS--QELIEELKIYFLSFDRPGYGE-----SDP------HP- 110 (341)
Q Consensus 47 ~g~~l~~~~~g~~~--~~~~~~vl~~hG~~~~~~~~~~~~--~~l~~~~~~~vi~~D~~G~G~-----S~~------~~- 110 (341)
-|..+.|..+-|+. +++.|+|+++||++++...|.... ..+....|+.|+.+|..++|. +.. ..
T Consensus 28 l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~ 107 (283)
T PLN02442 28 LGCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGF 107 (283)
T ss_pred cCCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcce
Confidence 46678888875542 235689999999999887775322 244455699999999887761 110 00
Q ss_pred ---------------CCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 111 ---------------LRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 111 ---------------~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
.+-.+++.+.+....+.++. ++++++||||||..++.++.++|+++++++.+++..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~-~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 108 YLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDT-SRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred eeccccCCCcccchhhhHHHHHHHHHHHHHHhcCC-CceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 00112222233333344566 789999999999999999999999999999999864
No 76
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.79 E-value=2.3e-18 Score=133.08 Aligned_cols=262 Identities=16% Similarity=0.120 Sum_probs=143.8
Q ss_pred CceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCc-chhhH-----HHHHHhcCceEEEEcCCCCCCCCC--CCCC
Q 038973 41 PRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDL-NLPVS-----QELIEELKIYFLSFDRPGYGESDP--HPLR 112 (341)
Q Consensus 41 ~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~-~~~~~-----~~l~~~~~~~vi~~D~~G~G~S~~--~~~~ 112 (341)
+.+++.-| .++....|.+++ ++|++|-.|-.|.+... |..+. ..+.+ .+.|+-+|.||+..-.. +.++
T Consensus 2 h~v~t~~G-~v~V~v~G~~~~-~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~--~f~i~Hi~aPGqe~ga~~~p~~y 77 (283)
T PF03096_consen 2 HDVETPYG-SVHVTVQGDPKG-NKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ--NFCIYHIDAPGQEEGAATLPEGY 77 (283)
T ss_dssp EEEEETTE-EEEEEEESS--T-TS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT--TSEEEEEE-TTTSTT-----TT-
T ss_pred ceeccCce-EEEEEEEecCCC-CCceEEEeccccccchHHHHHHhcchhHHHHhh--ceEEEEEeCCCCCCCcccccccc
Confidence 35666566 699999998643 68999999999987554 66443 44444 58899999999986542 3332
Q ss_pred ---CccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcch
Q 038973 113 ---TVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVE 189 (341)
Q Consensus 113 ---~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (341)
+++++++++.++++++++ +.++.+|-..||.|..++|..+|++|.++||+++...- ... ..|......
T Consensus 78 ~yPsmd~LAe~l~~Vl~~f~l-k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~------~gw--~Ew~~~K~~ 148 (283)
T PF03096_consen 78 QYPSMDQLAEMLPEVLDHFGL-KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTA------AGW--MEWFYQKLS 148 (283)
T ss_dssp ----HHHHHCTHHHHHHHHT----EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---------H--HHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHhCCc-cEEEEEeeccchhhhhhccccCccceeEEEEEecCCCC------ccH--HHHHHHHHh
Confidence 899999999999999999 89999999999999999999999999999999987531 100 000000000
Q ss_pred hhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccc
Q 038973 190 NQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWE 269 (341)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (341)
.+........+........ ..|...... ...+..+.++....... ...-...+.....
T Consensus 149 -~~~L~~~gmt~~~~d~Ll~-h~Fg~~~~~------~n~Dlv~~yr~~l~~~~-------Np~Nl~~f~~sy~------- 206 (283)
T PF03096_consen 149 -SWLLYSYGMTSSVKDYLLW-HYFGKEEEE------NNSDLVQTYRQHLDERI-------NPKNLALFLNSYN------- 206 (283)
T ss_dssp --------CTTS-HHHHHHH-HHS-HHHHH------CT-HHHHHHHHHHHT-T-------THHHHHHHHHHHH-------
T ss_pred -cccccccccccchHHhhhh-ccccccccc------ccHHHHHHHHHHHhcCC-------CHHHHHHHHHHHh-------
Confidence 0000000111111111111 111100000 01111112222111110 0000001111110
Q ss_pred cCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhC--CCcEEEEecCCCcccccC-HHHHHHHHHHHhh
Q 038973 270 FDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKL--PWIQYHEVPDAGHLFIFE-RKFCEAIIRALLV 340 (341)
Q Consensus 270 ~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 340 (341)
...++....+...||+|++.|+..+.. +.+.++.+++ .+.++..++++|=.+..| |..+++.+.-|++
T Consensus 207 -~R~DL~~~~~~~~c~vLlvvG~~Sp~~--~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQ 277 (283)
T PF03096_consen 207 -SRTDLSIERPSLGCPVLLVVGDNSPHV--DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQ 277 (283)
T ss_dssp -T-----SECTTCCS-EEEEEETTSTTH--HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHH
T ss_pred -ccccchhhcCCCCCCeEEEEecCCcch--hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHc
Confidence 122455556677799999999998875 5667788777 357899999999999999 9999999999986
No 77
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.78 E-value=3e-17 Score=124.90 Aligned_cols=269 Identities=14% Similarity=0.103 Sum_probs=164.6
Q ss_pred CCCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCc-chh-----hHHHHHHhcCceEEEEcCCCCCCCCC--C
Q 038973 38 VTSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDL-NLP-----VSQELIEELKIYFLSFDRPGYGESDP--H 109 (341)
Q Consensus 38 ~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~-~~~-----~~~~l~~~~~~~vi~~D~~G~G~S~~--~ 109 (341)
..++.+++..| .++...+|.+++ ++|++|-.|..+.+... |.. -+..+.++ |.|+-+|.|||-...+ +
T Consensus 22 ~~e~~V~T~~G-~v~V~V~Gd~~~-~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~--fcv~HV~~PGqe~gAp~~p 97 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYGDPKG-NKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH--FCVYHVDAPGQEDGAPSFP 97 (326)
T ss_pred ceeeeeccccc-cEEEEEecCCCC-CCceEEEecccccchHhHhHHhhcCHhHHHHHhh--eEEEecCCCccccCCccCC
Confidence 56778888777 599999998765 68889999999977554 553 34556554 8899999999976542 3
Q ss_pred CCC---CccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcC
Q 038973 110 PLR---TVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRL 186 (341)
Q Consensus 110 ~~~---~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~ 186 (341)
.+| ++++++++|..++++++. +.++-+|--.|+.|..++|..||++|.++||+++... ........+.+.
T Consensus 98 ~~y~yPsmd~LAd~l~~VL~~f~l-k~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~------a~gwiew~~~K~ 170 (326)
T KOG2931|consen 98 EGYPYPSMDDLADMLPEVLDHFGL-KSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPC------AKGWIEWAYNKV 170 (326)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCc-ceEEEecccccHHHHHHHHhcChhheeEEEEEecCCC------CchHHHHHHHHH
Confidence 342 899999999999999999 8999999999999999999999999999999998643 111111000000
Q ss_pred cchhhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhccc
Q 038973 187 PVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYA 266 (341)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (341)
.. .. .+............+ ...|..... .-..+..+.++........ ..-...+..... ..
T Consensus 171 ~s-~~--l~~~Gmt~~~~d~ll-~H~Fg~e~~------~~~~diVq~Yr~~l~~~~N-------~~Nl~~fl~ayn-~R- 231 (326)
T KOG2931|consen 171 SS-NL--LYYYGMTQGVKDYLL-AHHFGKEEL------GNNSDIVQEYRQHLGERLN-------PKNLALFLNAYN-GR- 231 (326)
T ss_pred HH-HH--HHhhchhhhHHHHHH-HHHhccccc------cccHHHHHHHHHHHHhcCC-------hhHHHHHHHHhc-CC-
Confidence 00 00 000000011111111 111111000 0011111222222211110 000111111110 00
Q ss_pred ccccCCCC-CCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhC--CCcEEEEecCCCcccccC-HHHHHHHHHHHhhC
Q 038973 267 KWEFDPTD-LINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKL--PWIQYHEVPDAGHLFIFE-RKFCEAIIRALLVR 341 (341)
Q Consensus 267 ~~~~~~~~-~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~~ 341 (341)
.|+.. ...+...++||+|++.|++.+.+ +.+.++...+ .+..+..+.++|-.+..+ |..+++.+.-|+++
T Consensus 232 ---~DL~~~r~~~~~tlkc~vllvvGd~Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 232 ---RDLSIERPKLGTTLKCPVLLVVGDNSPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred ---CCccccCCCcCccccccEEEEecCCCchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 11111 11122367799999999998875 4556666666 357889999999999998 99999999999863
No 78
>PLN00021 chlorophyllase
Probab=99.75 E-value=6.1e-17 Score=131.08 Aligned_cols=115 Identities=10% Similarity=0.021 Sum_probs=80.8
Q ss_pred EEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCC-CccchHHHHHHHHHH--
Q 038973 51 VAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLR-TVKTEACDVEQLADK-- 127 (341)
Q Consensus 51 l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~dl~~~l~~-- 127 (341)
+.+..+-+......|+||++||++.+...|..+++.|+++ ||.|+++|++|++.+...... +..+..+++.+.++.
T Consensus 39 ~p~~v~~P~~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~-G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l 117 (313)
T PLN00021 39 KPLLVATPSEAGTYPVLLFLHGYLLYNSFYSQLLQHIASH-GFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVL 117 (313)
T ss_pred ceEEEEeCCCCCCCCEEEEECCCCCCcccHHHHHHHHHhC-CCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhc
Confidence 4445554433445689999999999999999999999876 999999999987543211110 112222223322222
Q ss_pred -----hCCCCcEEEEEeccChHHHHHHHhhccc-----cccceeeecccc
Q 038973 128 -----LQIGSKFYVIGISMGAYPVYGCLKYIPQ-----RLAGASLVVPFV 167 (341)
Q Consensus 128 -----l~~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~~il~~~~~ 167 (341)
.+. ++++++|||+||.+++.+|..+++ +++++|+++|..
T Consensus 118 ~~~~~~d~-~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 118 PEGVRPDL-SKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred ccccccCh-hheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 233 689999999999999999998874 688999988853
No 79
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.75 E-value=5e-17 Score=126.31 Aligned_cols=186 Identities=18% Similarity=0.118 Sum_probs=110.3
Q ss_pred chhhHHHHHHhcCceEEEEcCCCCCCCCCC-----CCCCccchHHHHHHHHHHh------CCCCcEEEEEeccChHHHHH
Q 038973 80 NLPVSQELIEELKIYFLSFDRPGYGESDPH-----PLRTVKTEACDVEQLADKL------QIGSKFYVIGISMGAYPVYG 148 (341)
Q Consensus 80 ~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~-----~~~~~~~~~~dl~~~l~~l------~~~~~~~lvGhS~Gg~~a~~ 148 (341)
|......|+++ ||.|+.+|+||.+..... ....-....+|+.+.++.+ +. +++.++|||+||.+++.
T Consensus 3 f~~~~~~la~~-Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~-~ri~i~G~S~GG~~a~~ 80 (213)
T PF00326_consen 3 FNWNAQLLASQ-GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDP-DRIGIMGHSYGGYLALL 80 (213)
T ss_dssp -SHHHHHHHTT-T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEE-EEEEEEEETHHHHHHHH
T ss_pred eeHHHHHHHhC-CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccc-eeEEEEcccccccccch
Confidence 33444555555 999999999998854311 1112233456666666555 23 69999999999999999
Q ss_pred HHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCC
Q 038973 149 CLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSP 228 (341)
Q Consensus 149 ~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (341)
++.++|+++++++..++..... ...... ..
T Consensus 81 ~~~~~~~~f~a~v~~~g~~d~~-----~~~~~~------------------------------------------~~--- 110 (213)
T PF00326_consen 81 AATQHPDRFKAAVAGAGVSDLF-----SYYGTT------------------------------------------DI--- 110 (213)
T ss_dssp HHHHTCCGSSEEEEESE-SSTT-----CSBHHT------------------------------------------CC---
T ss_pred hhcccceeeeeeeccceecchh-----cccccc------------------------------------------cc---
Confidence 9999999999999999875410 000000 00
Q ss_pred chHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCC--CCccEEEEEeecCCCCChHHHHHHH
Q 038973 229 PDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPD--NEGSVHIWQGCEDRIIPSQINQFIS 306 (341)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~Pvlii~g~~D~~~p~~~~~~~~ 306 (341)
.............. ....+..... ..++.+ +++|+|+++|++|..||++.+.++.
T Consensus 111 ~~~~~~~~~~~~~~-------~~~~~~~~s~----------------~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~ 167 (213)
T PF00326_consen 111 YTKAEYLEYGDPWD-------NPEFYRELSP----------------ISPADNVQIKPPVLIIHGENDPRVPPSQSLRLY 167 (213)
T ss_dssp HHHGHHHHHSSTTT-------SHHHHHHHHH----------------GGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHH
T ss_pred cccccccccCccch-------hhhhhhhhcc----------------ccccccccCCCCEEEEccCCCCccCHHHHHHHH
Confidence 00000000000000 0000000000 000122 6677999999999999999888887
Q ss_pred hhC----CCcEEEEecCCCccccc-C-HHHHHHHHHHHhh
Q 038973 307 EKL----PWIQYHEVPDAGHLFIF-E-RKFCEAIIRALLV 340 (341)
Q Consensus 307 ~~~----~~~~~~~~~~~gH~~~~-e-p~~~~~~i~~fl~ 340 (341)
+.+ ..++++++|++||.+.. + .....+.+.+|++
T Consensus 168 ~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~ 207 (213)
T PF00326_consen 168 NALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFD 207 (213)
T ss_dssp HHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHH
Confidence 766 34899999999996664 3 5567777777775
No 80
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.74 E-value=1.1e-16 Score=124.03 Aligned_cols=105 Identities=17% Similarity=0.198 Sum_probs=75.1
Q ss_pred CCceEEEEcCCCCCCCcchh--hHHHHHHhcCceEEEEcCCCCCCCCCCCC-------CCccchHHHHHHHHHHh----C
Q 038973 63 ANHKIIIIHGFGSSKDLNLP--VSQELIEELKIYFLSFDRPGYGESDPHPL-------RTVKTEACDVEQLADKL----Q 129 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~--~~~~l~~~~~~~vi~~D~~G~G~S~~~~~-------~~~~~~~~dl~~~l~~l----~ 129 (341)
..|+||++||.+++...+.. -...++++.||.|+++|.+|++.+..... ........++..+++.+ +
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 46899999999988766641 23455666799999999999885432110 01112344444444443 3
Q ss_pred CC-CcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 130 IG-SKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 130 ~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
++ ++++|+|||+||.+++.++..+|+.+.+++.+++..
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 32 589999999999999999999999999999988753
No 81
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.71 E-value=1.1e-16 Score=130.52 Aligned_cols=129 Identities=19% Similarity=0.173 Sum_probs=82.3
Q ss_pred CCCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHH-HHHHhcCceEEEEcCCCCCCCCCCC-CCCcc
Q 038973 38 VTSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQ-ELIEELKIYFLSFDRPGYGESDPHP-LRTVK 115 (341)
Q Consensus 38 ~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~-~l~~~~~~~vi~~D~~G~G~S~~~~-~~~~~ 115 (341)
++...|...+ .+|.....-+..+++.|+||++.|.-+....+..++. .+..+ |+.++++|.||.|.|...+ ..+.+
T Consensus 165 i~~v~iP~eg-~~I~g~LhlP~~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~r-GiA~LtvDmPG~G~s~~~~l~~D~~ 242 (411)
T PF06500_consen 165 IEEVEIPFEG-KTIPGYLHLPSGEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPR-GIAMLTVDMPGQGESPKWPLTQDSS 242 (411)
T ss_dssp EEEEEEEETT-CEEEEEEEESSSSS-EEEEEEE--TTS-GGGGHHHHHCCCHHC-T-EEEEE--TTSGGGTTT-S-S-CC
T ss_pred cEEEEEeeCC-cEEEEEEEcCCCCCCCCEEEEeCCcchhHHHHHHHHHHHHHhC-CCEEEEEccCCCcccccCCCCcCHH
Confidence 4555566644 5666555545444455777777777777777665554 45554 9999999999999986422 23445
Q ss_pred chHHHHHHHHHHhCC--CCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 116 TEACDVEQLADKLQI--GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 116 ~~~~dl~~~l~~l~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
.+.+.+.+.+..... ..+|.++|.|+||.+|.++|..+++|++++|..++++.
T Consensus 243 ~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 243 RLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVH 297 (411)
T ss_dssp HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---S
T ss_pred HHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHh
Confidence 556666666655431 15999999999999999999988899999999999764
No 82
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.71 E-value=2.9e-15 Score=127.13 Aligned_cols=129 Identities=5% Similarity=0.031 Sum_probs=97.2
Q ss_pred CCCCceEccCCcEEEEEEccCC-CCCCCceEEEEcCCCCCCCcch-----hhHHHHHHhcCceEEEEcCCCCCCCCCCCC
Q 038973 38 VTSPRIKLSDGRHVAYREAGVP-KEEANHKIIIIHGFGSSKDLNL-----PVSQELIEELKIYFLSFDRPGYGESDPHPL 111 (341)
Q Consensus 38 ~~~~~~~~~~g~~l~~~~~g~~-~~~~~~~vl~~hG~~~~~~~~~-----~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~ 111 (341)
.+...+...++. +..+.+.+. +...+.|||+++.+-.-...++ .+++.|.++ |++|+.+|+++-+.+. ..
T Consensus 189 ~TPg~VV~~n~l-~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~q-G~~VflIsW~nP~~~~--r~ 264 (560)
T TIGR01839 189 TTEGAVVFRNEV-LELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKN-QLQVFIISWRNPDKAH--RE 264 (560)
T ss_pred CCCCceeEECCc-eEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHHc-CCeEEEEeCCCCChhh--cC
Confidence 344444444442 444444332 2345689999999987777774 889999887 9999999999876654 34
Q ss_pred CCccchHHHHHHHHHHh----CCCCcEEEEEeccChHHHHH----HHhhccc-cccceeeecccccccC
Q 038973 112 RTVKTEACDVEQLADKL----QIGSKFYVIGISMGAYPVYG----CLKYIPQ-RLAGASLVVPFVHYWW 171 (341)
Q Consensus 112 ~~~~~~~~dl~~~l~~l----~~~~~~~lvGhS~Gg~~a~~----~a~~~p~-~v~~~il~~~~~~~~~ 171 (341)
.+++++++.+.+.++.. |. +++.++|||+||.+++. +++++++ +|++++++.+..++..
T Consensus 265 ~~ldDYv~~i~~Ald~V~~~tG~-~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~ 332 (560)
T TIGR01839 265 WGLSTYVDALKEAVDAVRAITGS-RDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTM 332 (560)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCC-CCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCC
Confidence 57888888777777665 55 79999999999999886 7888886 8999999999887643
No 83
>PRK10162 acetyl esterase; Provisional
Probab=99.69 E-value=8e-15 Score=120.36 Aligned_cols=125 Identities=18% Similarity=0.155 Sum_probs=85.0
Q ss_pred CCceEccCCcEEEEEEccCCCCCCCceEEEEcCCC---CCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccc
Q 038973 40 SPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFG---SSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKT 116 (341)
Q Consensus 40 ~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~---~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 116 (341)
...+...+| .+..+.+.+. ....|+||++||.+ ++...|..++..|+...|+.|+.+|+|...+...+. .+++
T Consensus 59 ~~~i~~~~g-~i~~~~y~P~-~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~--~~~D 134 (318)
T PRK10162 59 AYMVPTPYG-QVETRLYYPQ-PDSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQ--AIEE 134 (318)
T ss_pred EEEEecCCC-ceEEEEECCC-CCCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCC--cHHH
Confidence 334444455 4666666553 23468999999987 566778888999988779999999999755432111 2222
Q ss_pred h---HHHHHHHHHHhCCC-CcEEEEEeccChHHHHHHHhhc------cccccceeeeccccc
Q 038973 117 E---ACDVEQLADKLQIG-SKFYVIGISMGAYPVYGCLKYI------PQRLAGASLVVPFVH 168 (341)
Q Consensus 117 ~---~~dl~~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~~------p~~v~~~il~~~~~~ 168 (341)
. .+.+.+..+.++++ ++++++|+|+||.+++.++... +.++++++++.|...
T Consensus 135 ~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 135 IVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred HHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 2 22233333345542 5899999999999999988653 357899999988643
No 84
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.69 E-value=2.9e-16 Score=130.86 Aligned_cols=106 Identities=15% Similarity=0.151 Sum_probs=82.3
Q ss_pred CCceEEEEcCCCCCC--Ccchh-hHHHHHHhc-CceEEEEcCCCCCCCCCCC-CCCccchHHHHHHHHHHh------CCC
Q 038973 63 ANHKIIIIHGFGSSK--DLNLP-VSQELIEEL-KIYFLSFDRPGYGESDPHP-LRTVKTEACDVEQLADKL------QIG 131 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~--~~~~~-~~~~l~~~~-~~~vi~~D~~G~G~S~~~~-~~~~~~~~~dl~~~l~~l------~~~ 131 (341)
++|++|++||++.+. ..|.+ +...+.... +++||++|++|+|.|..+. ......+++++.++++.+ ++
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l- 118 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW- 118 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC-
Confidence 568999999998754 34554 444444322 5899999999999886543 224456777788877765 35
Q ss_pred CcEEEEEeccChHHHHHHHhhccccccceeeecccccc
Q 038973 132 SKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHY 169 (341)
Q Consensus 132 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 169 (341)
++++||||||||.+|..++..+|++|.++++++|..+.
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 79999999999999999999999999999999997653
No 85
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.69 E-value=8.4e-16 Score=119.76 Aligned_cols=175 Identities=21% Similarity=0.183 Sum_probs=111.1
Q ss_pred CCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC-CC-----------CccchHHHHHHHHHHhC
Q 038973 62 EANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP-LR-----------TVKTEACDVEQLADKLQ 129 (341)
Q Consensus 62 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~-~~-----------~~~~~~~dl~~~l~~l~ 129 (341)
.+.|.||++|++.+-....+.+++.|+++ ||.|+++|+-+-....... .. ..+...+++.+.++.+.
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~-Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~ 90 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIRDLADRLAEE-GYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLR 90 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHHHHHHHHHHT-T-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCchHHHHHHHHHHhc-CCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 35689999999988776677888889887 9999999986544411111 00 12355677767777663
Q ss_pred C-----CCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhh
Q 038973 130 I-----GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLL 204 (341)
Q Consensus 130 ~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (341)
. .+++.++|+|+||.+++.++... ..+++.+..-|... +
T Consensus 91 ~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~------~----------------------------- 134 (218)
T PF01738_consen 91 AQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP------P----------------------------- 134 (218)
T ss_dssp CTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS------G-----------------------------
T ss_pred hccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC------C-----------------------------
Confidence 2 15899999999999999999886 57888887766100 0
Q ss_pred HHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCc
Q 038973 205 NLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEG 284 (341)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 284 (341)
.. . .....++++
T Consensus 135 --------~~---------------~---------------------------------------------~~~~~~~~~ 146 (218)
T PF01738_consen 135 --------PP---------------P---------------------------------------------LEDAPKIKA 146 (218)
T ss_dssp --------GG---------------H---------------------------------------------HHHGGG--S
T ss_pred --------Cc---------------c---------------------------------------------hhhhcccCC
Confidence 00 0 000233445
Q ss_pred cEEEEEeecCCCCChHHHHHHHhhC----CCcEEEEecCCCcccccC--H-------HHHHHHHHHHhhC
Q 038973 285 SVHIWQGCEDRIIPSQINQFISEKL----PWIQYHEVPDAGHLFIFE--R-------KFCEAIIRALLVR 341 (341)
Q Consensus 285 Pvlii~g~~D~~~p~~~~~~~~~~~----~~~~~~~~~~~gH~~~~e--p-------~~~~~~i~~fl~~ 341 (341)
|+++++|++|+.+|.+..+.+.+.+ ...++++++|++|.+... + +...+.+.+||++
T Consensus 147 P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 147 PVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp -EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred CEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 5999999999999998766666555 568999999999977663 2 3344556666654
No 86
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.68 E-value=5.6e-16 Score=113.93 Aligned_cols=155 Identities=19% Similarity=0.222 Sum_probs=102.5
Q ss_pred EEEEcCCCCC-CCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChHH
Q 038973 67 IIIIHGFGSS-KDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYP 145 (341)
Q Consensus 67 vl~~hG~~~~-~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~ 145 (341)
|+++||++++ ...|.+...+-.... ++|-.+|+ ...+.+++.+.+.+.+.... +++++||||+|+..
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~---------~~P~~~~W~~~l~~~i~~~~--~~~ilVaHSLGc~~ 68 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW---------DNPDLDEWVQALDQAIDAID--EPTILVAHSLGCLT 68 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC-----------TS--HHHHHHHHHHCCHC-T--TTEEEEEETHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc---------CCCCHHHHHHHHHHHHhhcC--CCeEEEEeCHHHHH
Confidence 6899999877 567886666555542 66777666 12367777777777777654 57999999999999
Q ss_pred HHHHH-hhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhhcccccccccccccCC
Q 038973 146 VYGCL-KYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMD 224 (341)
Q Consensus 146 a~~~a-~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (341)
+++++ .....+|++++|++|+-. ... . ...+ ...
T Consensus 69 ~l~~l~~~~~~~v~g~lLVAp~~~-------~~~----~---------------------------~~~~-------~~~ 103 (171)
T PF06821_consen 69 ALRWLAEQSQKKVAGALLVAPFDP-------DDP----E---------------------------PFPP-------ELD 103 (171)
T ss_dssp HHHHHHHTCCSSEEEEEEES--SC-------GCH----H---------------------------CCTC-------GGC
T ss_pred HHHHHhhcccccccEEEEEcCCCc-------ccc----c---------------------------chhh-------hcc
Confidence 99999 777889999999999631 000 0 0000 000
Q ss_pred CCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHH
Q 038973 225 IFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQF 304 (341)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~ 304 (341)
. ....|...+.+|.++|.+++|+.+|.+.+++
T Consensus 104 ~------------------------------------------------f~~~p~~~l~~~~~viaS~nDp~vp~~~a~~ 135 (171)
T PF06821_consen 104 G------------------------------------------------FTPLPRDPLPFPSIVIASDNDPYVPFERAQR 135 (171)
T ss_dssp C------------------------------------------------CTTSHCCHHHCCEEEEEETTBSSS-HHHHHH
T ss_pred c------------------------------------------------cccCcccccCCCeEEEEcCCCCccCHHHHHH
Confidence 0 0011122234448999999999999999999
Q ss_pred HHhhCCCcEEEEecCCCcccccC
Q 038973 305 ISEKLPWIQYHEVPDAGHLFIFE 327 (341)
Q Consensus 305 ~~~~~~~~~~~~~~~~gH~~~~e 327 (341)
+++.+ +++++.++++||+.-.+
T Consensus 136 ~A~~l-~a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 136 LAQRL-GAELIILGGGGHFNAAS 157 (171)
T ss_dssp HHHHH-T-EEEEETS-TTSSGGG
T ss_pred HHHHc-CCCeEECCCCCCccccc
Confidence 99999 89999999999998765
No 87
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.68 E-value=6.1e-16 Score=120.11 Aligned_cols=109 Identities=26% Similarity=0.354 Sum_probs=62.1
Q ss_pred CCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCC------CCCC--CC------CCC-----CCccchHH
Q 038973 59 PKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPG------YGES--DP------HPL-----RTVKTEAC 119 (341)
Q Consensus 59 ~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G------~G~S--~~------~~~-----~~~~~~~~ 119 (341)
+.++..++||++||+|.+...|...........+..++.++-|. .|.. .. ... ..+.+.++
T Consensus 9 ~~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~ 88 (216)
T PF02230_consen 9 PKGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAE 88 (216)
T ss_dssp -SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHH
T ss_pred CCCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHH
Confidence 34456789999999999986555443311112256677776542 2220 10 000 02223334
Q ss_pred HHHHHHHHh---CC-CCcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 120 DVEQLADKL---QI-GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 120 dl~~~l~~l---~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
.+.++++.. ++ .++++++|+|+||.+++.++.++|+.+.++|.+++..
T Consensus 89 ~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~ 140 (216)
T PF02230_consen 89 RLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYL 140 (216)
T ss_dssp HHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---
T ss_pred HHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccc
Confidence 455555532 22 2689999999999999999999999999999999864
No 88
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.66 E-value=6.2e-15 Score=121.61 Aligned_cols=266 Identities=12% Similarity=0.049 Sum_probs=147.8
Q ss_pred CceEEEEcCCCCCCCcc-hhhHHHHHHhcCceEEEEcCCCCCCCC-CCCCCCccchHHHHHHHHHHhCCCCcEEEEEecc
Q 038973 64 NHKIIIIHGFGSSKDLN-LPVSQELIEELKIYFLSFDRPGYGESD-PHPLRTVKTEACDVEQLADKLQIGSKFYVIGISM 141 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~~-~~~~~~l~~~~~~~vi~~D~~G~G~S~-~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~ 141 (341)
+|+||++..+.+..... +.+++.|.. |+.|+..|+..-+... .....+++++++-|.++++++|. + ++++|+|+
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll~--g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~-~-v~l~GvCq 177 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALLP--DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGP-D-IHVIAVCQ 177 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHhC--CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCC-C-CcEEEEch
Confidence 37999999888664444 377788877 7889999998877654 23356999999999999999986 4 99999999
Q ss_pred ChHHHHHHHhhc-----cccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHh------------hhchhhh
Q 038973 142 GAYPVYGCLKYI-----PQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIA------------YYFPWLL 204 (341)
Q Consensus 142 Gg~~a~~~a~~~-----p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 204 (341)
||..++.+++.. |+++++++++++++++... |. ....+.............. ...|.+.
T Consensus 178 gG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~--p~--~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~ 253 (406)
T TIGR01849 178 PAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARAS--PT--VVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFL 253 (406)
T ss_pred hhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCC--Cc--hHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHH
Confidence 999977766654 6679999999998875321 11 1111111110000000000 0111111
Q ss_pred HHhhhc--cccc-ccccccccCCCC--CCchHH----HHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCC
Q 038973 205 NLWMSQ--KWFP-TLSIMSGNMDIF--SPPDLE----ILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDL 275 (341)
Q Consensus 205 ~~~~~~--~~~~-~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (341)
...... .... ............ .....+ ....+....... .... ......++.+.......| ....-
T Consensus 254 ~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlp-ge~y-~~~v~~vf~~n~L~~G~l--~v~G~ 329 (406)
T TIGR01849 254 QLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMT-AEFY-LQTIDVVFQQFLLPQGKF--IVEGK 329 (406)
T ss_pred HHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCc-HHHH-HHHHHHHHHhCCccCCcE--EECCE
Confidence 100000 0000 000000000000 001111 111111111110 0000 111111111111111111 11122
Q ss_pred CCCCCCCC-ccEEEEEeecCCCCChHHHHHHHhhC---C--CcEEEEecCCCcccccC----HHHHHHHHHHHhhC
Q 038973 276 INPFPDNE-GSVHIWQGCEDRIIPSQINQFISEKL---P--WIQYHEVPDAGHLFIFE----RKFCEAIIRALLVR 341 (341)
Q Consensus 276 ~~~~~~i~-~Pvlii~g~~D~~~p~~~~~~~~~~~---~--~~~~~~~~~~gH~~~~e----p~~~~~~i~~fl~~ 341 (341)
...+.+|+ +|+|.+.|++|.++|+..++.+.+.+ + +.+.+..+++||..... .+++...|.+|+.+
T Consensus 330 ~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 330 RVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred EecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 33467788 89999999999999999998888874 4 34577787899987763 77888999999863
No 89
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.66 E-value=2.2e-14 Score=102.64 Aligned_cols=172 Identities=16% Similarity=0.110 Sum_probs=118.3
Q ss_pred CCCCceEEEEcCCCCCCCcch-----hhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHH--HHHHHHHHhCCCCc
Q 038973 61 EEANHKIIIIHGFGSSKDLNL-----PVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEAC--DVEQLADKLQIGSK 133 (341)
Q Consensus 61 ~~~~~~vl~~hG~~~~~~~~~-----~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~--dl~~~l~~l~~~~~ 133 (341)
.++.|..|++|.-+.-..... .+...|.+ .||.++.+|+||.|+|...-+..+-+..+ ...+++.....+.+
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~-~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~ 103 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVK-RGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSA 103 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHh-CCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCch
Confidence 356788899998664433332 33344444 49999999999999998766554443322 23344444444333
Q ss_pred -EEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhhccc
Q 038973 134 -FYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMSQKW 212 (341)
Q Consensus 134 -~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (341)
..+.|+|+|+.|++.+|.+.|+ ....+.+.+.+..
T Consensus 104 ~~~l~GfSFGa~Ia~~la~r~~e-~~~~is~~p~~~~------------------------------------------- 139 (210)
T COG2945 104 SCWLAGFSFGAYIAMQLAMRRPE-ILVFISILPPINA------------------------------------------- 139 (210)
T ss_pred hhhhcccchHHHHHHHHHHhccc-ccceeeccCCCCc-------------------------------------------
Confidence 3689999999999999999875 5555555543210
Q ss_pred ccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEee
Q 038973 213 FPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGC 292 (341)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~ 292 (341)
... .. +....+|.++|+|+
T Consensus 140 ---------------------~df-------------------------------------s~---l~P~P~~~lvi~g~ 158 (210)
T COG2945 140 ---------------------YDF-------------------------------------SF---LAPCPSPGLVIQGD 158 (210)
T ss_pred ---------------------hhh-------------------------------------hh---ccCCCCCceeEecC
Confidence 000 00 11223449999999
Q ss_pred cCCCCChHHHHHHHhhCCCcEEEEecCCCcccccCHHHHHHHHHHHh
Q 038973 293 EDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFERKFCEAIIRALL 339 (341)
Q Consensus 293 ~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~ep~~~~~~i~~fl 339 (341)
.|.+++......+++. ...+++++++++||++..-..+.+.+.+|+
T Consensus 159 ~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~gKl~~l~~~i~~~l 204 (210)
T COG2945 159 ADDVVDLVAVLKWQES-IKITVITIPGADHFFHGKLIELRDTIADFL 204 (210)
T ss_pred hhhhhcHHHHHHhhcC-CCCceEEecCCCceecccHHHHHHHHHHHh
Confidence 9999998888888877 467889999999999987777888888887
No 90
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.65 E-value=2.9e-14 Score=125.90 Aligned_cols=123 Identities=15% Similarity=0.057 Sum_probs=95.9
Q ss_pred EccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCC---cch-hhHHHHHHhcCceEEEEcCCCCCCCCCCCC-CCccchH
Q 038973 44 KLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKD---LNL-PVSQELIEELKIYFLSFDRPGYGESDPHPL-RTVKTEA 118 (341)
Q Consensus 44 ~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~---~~~-~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~ 118 (341)
.+.||.+|++..+-+....+.|+||++||++.+.. .+. .....+.++ ||.|+++|+||+|.|+.... .+ ...+
T Consensus 2 ~~~DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~-Gy~vv~~D~RG~g~S~g~~~~~~-~~~~ 79 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQ-GYAVVIQDTRGRGASEGEFDLLG-SDEA 79 (550)
T ss_pred cCCCCCEEEEEEEecCCCCCCCEEEEecCCCCchhhccccccccHHHHHhC-CcEEEEEeccccccCCCceEecC-cccc
Confidence 45689999988876543345789999999987653 232 244556665 99999999999999986432 23 6678
Q ss_pred HHHHHHHHHhCC----CCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 119 CDVEQLADKLQI----GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 119 ~dl~~~l~~l~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
+|+.++++.+.. +.++.++|||+||.+++.+|..+|++++++|..++...
T Consensus 80 ~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 80 ADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred hHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 888888887732 25899999999999999999999999999999888654
No 91
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.64 E-value=1.6e-14 Score=108.92 Aligned_cols=216 Identities=14% Similarity=0.081 Sum_probs=138.3
Q ss_pred CCceEccCCcEEEEEEccCCCC-CCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCC----CC-C--
Q 038973 40 SPRIKLSDGRHVAYREAGVPKE-EANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDP----HP-L-- 111 (341)
Q Consensus 40 ~~~~~~~~g~~l~~~~~g~~~~-~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~----~~-~-- 111 (341)
.-+++..+|.+|+-+..-+..+ ...|.||-.||+++....|..+...-.. ||.|+.+|.||.|.|.. ++ +
T Consensus 58 dvTf~g~~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~~--Gyavf~MdvRGQg~~~~dt~~~p~~~s 135 (321)
T COG3458 58 DVTFTGYGGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAVA--GYAVFVMDVRGQGSSSQDTADPPGGPS 135 (321)
T ss_pred EEEEeccCCceEEEEEEeecccCCccceEEEEeeccCCCCCcccccccccc--ceeEEEEecccCCCccccCCCCCCCCc
Confidence 3345556788888877766544 4568899999999999888766544333 89999999999998842 11 1
Q ss_pred ---------------CCccchHHHHHHHHHHh------CCCCcEEEEEeccChHHHHHHHhhccccccceeeeccccccc
Q 038973 112 ---------------RTVKTEACDVEQLADKL------QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYW 170 (341)
Q Consensus 112 ---------------~~~~~~~~dl~~~l~~l------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~ 170 (341)
+-......|+..+++.+ .. +++.+.|.|.||.+++.+++..| +|++++.+-|.....
T Consensus 136 ~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde-~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df 213 (321)
T COG3458 136 DPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDE-ERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDF 213 (321)
T ss_pred CCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccch-hheEEeccccCchhhhhhhhcCh-hhhcccccccccccc
Confidence 11233445555555543 33 79999999999999999998876 899999998875420
Q ss_pred CCCCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhh
Q 038973 171 WPCLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQ 250 (341)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (341)
. ++. .......-..+..+...-...+
T Consensus 214 ~---------------------------------------r~i----------~~~~~~~ydei~~y~k~h~~~e----- 239 (321)
T COG3458 214 P---------------------------------------RAI----------ELATEGPYDEIQTYFKRHDPKE----- 239 (321)
T ss_pred h---------------------------------------hhe----------eecccCcHHHHHHHHHhcCchH-----
Confidence 0 000 0011111112222211111100
Q ss_pred hhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCC-cEEEEecCCCccccc
Q 038973 251 QGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPW-IQYHEVPDAGHLFIF 326 (341)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~gH~~~~ 326 (341)
......+. .-++.+-..++++|+|+..|--|++||+...-.+++.++. .++.+++--+|.-.-
T Consensus 240 ~~v~~TL~-------------yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~p 303 (321)
T COG3458 240 AEVFETLS-------------YFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGGP 303 (321)
T ss_pred HHHHHHHh-------------hhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccCc
Confidence 00001100 0133444567888899999999999999999999999975 567778776786554
No 92
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.64 E-value=1.4e-14 Score=117.47 Aligned_cols=230 Identities=19% Similarity=0.187 Sum_probs=123.2
Q ss_pred CCceEccCCcEEEEEEccCC-CCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCC-CC-------
Q 038973 40 SPRIKLSDGRHVAYREAGVP-KEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDP-HP------- 110 (341)
Q Consensus 40 ~~~~~~~~g~~l~~~~~g~~-~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~-~~------- 110 (341)
.-.+...+|..++-...-|. .+.+-|.||.+||.++....|...+. ++.. ||.|+.+|.||+|.... ..
T Consensus 58 ~v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~a~~-G~~vl~~d~rGqg~~~~d~~~~~~~~~ 135 (320)
T PF05448_consen 58 DVSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-WAAA-GYAVLAMDVRGQGGRSPDYRGSSGGTL 135 (320)
T ss_dssp EEEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-HHHT-T-EEEEE--TTTSSSS-B-SSBSSS-S
T ss_pred EEEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccc-cccC-CeEEEEecCCCCCCCCCCccccCCCCC
Confidence 34455557888887766554 33456889999999998777765543 4444 99999999999993221 10
Q ss_pred -CC---Ccc---------chHHHHHHHHHHhC----C-CCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCC
Q 038973 111 -LR---TVK---------TEACDVEQLADKLQ----I-GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWP 172 (341)
Q Consensus 111 -~~---~~~---------~~~~dl~~~l~~l~----~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~ 172 (341)
.+ .++ .+..|....++.+. + ++++.+.|.|+||.+++.+|+..| +|++++...|+...
T Consensus 136 ~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d--- 211 (320)
T PF05448_consen 136 KGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD--- 211 (320)
T ss_dssp SSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS---
T ss_pred ccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc---
Confidence 11 122 23456666665542 1 268999999999999999999876 79999999886431
Q ss_pred CCCccchhhhhhcCcchhhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhc---CCCCchhHHh
Q 038973 173 CLPANLSREALQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSE---SPSEGQEKIL 249 (341)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 249 (341)
. ...+. ... .......+..+.. .... .
T Consensus 212 ----~--~~~~~-----------~~~----------------------------~~~~y~~~~~~~~~~d~~~~-----~ 241 (320)
T PF05448_consen 212 ----F--RRALE-----------LRA----------------------------DEGPYPEIRRYFRWRDPHHE-----R 241 (320)
T ss_dssp ----H--HHHHH-----------HT------------------------------STTTHHHHHHHHHHSCTHC-----H
T ss_pred ----h--hhhhh-----------cCC----------------------------ccccHHHHHHHHhccCCCcc-----c
Confidence 0 00000 000 0000000111110 0000 0
Q ss_pred hhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCC-CcEEEEecCCCcccccCH
Q 038973 250 QQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLP-WIQYHEVPDAGHLFIFER 328 (341)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~-~~~~~~~~~~gH~~~~ep 328 (341)
.......+. . -+...-.++|+||+++-.|-.|.+||+...-...+.++ ..++.+++..||....
T Consensus 242 ~~~v~~~L~-----Y--------~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~-- 306 (320)
T PF05448_consen 242 EPEVFETLS-----Y--------FDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGP-- 306 (320)
T ss_dssp HHHHHHHHH-----T--------T-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTH--
T ss_pred HHHHHHHHh-----h--------hhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchh--
Confidence 000000000 0 01111145577889999999999999999999999996 4789999999997763
Q ss_pred HHHHHHHHHHhh
Q 038973 329 KFCEAIIRALLV 340 (341)
Q Consensus 329 ~~~~~~i~~fl~ 340 (341)
+.-.+...+||+
T Consensus 307 ~~~~~~~~~~l~ 318 (320)
T PF05448_consen 307 EFQEDKQLNFLK 318 (320)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHh
Confidence 222444445543
No 93
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.64 E-value=8.7e-16 Score=122.80 Aligned_cols=117 Identities=15% Similarity=0.143 Sum_probs=86.2
Q ss_pred CCcEEEEEEccCCCCCCCceEEEEcCCCCCC-Ccchhh-HHHHHHhcCceEEEEcCCCCCCCCCCC-CCCccchHHHHHH
Q 038973 47 DGRHVAYREAGVPKEEANHKIIIIHGFGSSK-DLNLPV-SQELIEELKIYFLSFDRPGYGESDPHP-LRTVKTEACDVEQ 123 (341)
Q Consensus 47 ~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~-~~~~~~-~~~l~~~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~dl~~ 123 (341)
++..+.+..+.+ .+|++|++||++++. ..|... ...+..+.+++|+++|+++++.+..+. ..+...+++++..
T Consensus 23 ~~~~~~~~~f~~----~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~ 98 (275)
T cd00707 23 DPSSLKNSNFNP----SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAK 98 (275)
T ss_pred ChhhhhhcCCCC----CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHH
Confidence 455566655543 468999999999887 677644 444555447999999999984432211 1245555666666
Q ss_pred HHHHh------CCCCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 124 LADKL------QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 124 ~l~~l------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
+++.+ +. +++++|||||||.++..++.++|++|+++++++|..+
T Consensus 99 ~l~~L~~~~g~~~-~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 99 FLDFLVDNTGLSL-ENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred HHHHHHHhcCCCh-HHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 66654 33 6899999999999999999999999999999998764
No 94
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.62 E-value=1.2e-15 Score=96.30 Aligned_cols=77 Identities=21% Similarity=0.355 Sum_probs=67.3
Q ss_pred CcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCC--CccchHHHHHHHH
Q 038973 48 GRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLR--TVKTEACDVEQLA 125 (341)
Q Consensus 48 g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~--~~~~~~~dl~~~l 125 (341)
|.+|+++.|.+.++ .+.+|+++||++.++..|..++..|.++ ||.|+++|+||||.|+....+ +++++++|+..++
T Consensus 1 G~~L~~~~w~p~~~-~k~~v~i~HG~~eh~~ry~~~a~~L~~~-G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 1 GTKLFYRRWKPENP-PKAVVVIVHGFGEHSGRYAHLAEFLAEQ-GYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred CcEEEEEEecCCCC-CCEEEEEeCCcHHHHHHHHHHHHHHHhC-CCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 67899999977643 6889999999999999999999999886 999999999999999865543 8899999999886
Q ss_pred H
Q 038973 126 D 126 (341)
Q Consensus 126 ~ 126 (341)
+
T Consensus 79 ~ 79 (79)
T PF12146_consen 79 Q 79 (79)
T ss_pred C
Confidence 4
No 95
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.59 E-value=2.6e-13 Score=105.61 Aligned_cols=177 Identities=19% Similarity=0.139 Sum_probs=127.2
Q ss_pred ceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCC-CCCCCCC-------C--
Q 038973 42 RIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGY-GESDPHP-------L-- 111 (341)
Q Consensus 42 ~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~-G~S~~~~-------~-- 111 (341)
.+...+ .++.-...-+......|.||++|+..+-....+.+.++|+.. ||.|+++|+-+. |.+.... .
T Consensus 6 ~~~~~~-~~~~~~~a~P~~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~-Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~ 83 (236)
T COG0412 6 TIPAPD-GELPAYLARPAGAGGFPGVIVLHEIFGLNPHIRDVARRLAKA-GYVVLAPDLYGRQGDPTDIEDEPAELETGL 83 (236)
T ss_pred EeeCCC-ceEeEEEecCCcCCCCCEEEEEecccCCchHHHHHHHHHHhC-CcEEEechhhccCCCCCcccccHHHHhhhh
Confidence 344444 455555553433233489999999999999999999999987 999999998763 3332211 0
Q ss_pred ---CCccchHHHHHHHHHHhC-----CCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhh
Q 038973 112 ---RTVKTEACDVEQLADKLQ-----IGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREAL 183 (341)
Q Consensus 112 ---~~~~~~~~dl~~~l~~l~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~ 183 (341)
.+..+...|+.+.++.|. ..+++.++|+||||.+++.++...| .+++.+..-+....
T Consensus 84 ~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~-------------- 148 (236)
T COG0412 84 VERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIA-------------- 148 (236)
T ss_pred hccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCC--------------
Confidence 122567778888888773 1267999999999999999999877 68888877664210
Q ss_pred hcCcchhhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhh
Q 038973 184 QRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKT 263 (341)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (341)
T Consensus 149 -------------------------------------------------------------------------------- 148 (236)
T COG0412 149 -------------------------------------------------------------------------------- 148 (236)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCC----CcEEEEecCCCcccc
Q 038973 264 GYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLP----WIQYHEVPDAGHLFI 325 (341)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~gH~~~ 325 (341)
.-.....++++|++++.|+.|..+|......+.+.+. +.++.+++++.|.++
T Consensus 149 ----------~~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~ 204 (236)
T COG0412 149 ----------DDTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFA 204 (236)
T ss_pred ----------CcccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccc
Confidence 0000033566669999999999999887777776652 578999999989666
No 96
>COG0400 Predicted esterase [General function prediction only]
Probab=99.58 E-value=5.2e-14 Score=105.83 Aligned_cols=104 Identities=24% Similarity=0.282 Sum_probs=67.3
Q ss_pred CCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCC--CCCCCC-----CCCCCccc-------hHHHHHHHHHH
Q 038973 62 EANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPG--YGESDP-----HPLRTVKT-------EACDVEQLADK 127 (341)
Q Consensus 62 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G--~G~S~~-----~~~~~~~~-------~~~dl~~~l~~ 127 (341)
+..|+||++||+|++...+.+....+.. ++.++.+.-+- .|.-.. ...++.++ +++-+....++
T Consensus 16 p~~~~iilLHG~Ggde~~~~~~~~~~~P--~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~ 93 (207)
T COG0400 16 PAAPLLILLHGLGGDELDLVPLPELILP--NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEE 93 (207)
T ss_pred CCCcEEEEEecCCCChhhhhhhhhhcCC--CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHH
Confidence 4567899999999988888775555444 33344432111 010000 00122222 23334444444
Q ss_pred hCCC-CcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 128 LQIG-SKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 128 l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
.+++ ++++++|+|.||++++.+..++|+.++++|++++..
T Consensus 94 ~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~ 134 (207)
T COG0400 94 YGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGML 134 (207)
T ss_pred hCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcC
Confidence 4542 699999999999999999999999999999999864
No 97
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.58 E-value=5.2e-14 Score=110.85 Aligned_cols=101 Identities=16% Similarity=0.238 Sum_probs=83.3
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChH
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAY 144 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ 144 (341)
++|+++|+.+++...|.++++.+... .+.|+.++.+|.+ .+.+...+++++++...+.+.....+.++.|+|||+||.
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~-~~~v~~i~~~~~~-~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~ 78 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDD-VIGVYGIEYPGRG-DDEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGI 78 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTT-EEEEEEECSTTSC-TTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCC-eEEEEEEecCCCC-CCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHH
Confidence 37999999999999999999999875 3779999999998 223334689999999888888877635999999999999
Q ss_pred HHHHHHhhc---cccccceeeecccc
Q 038973 145 PVYGCLKYI---PQRLAGASLVVPFV 167 (341)
Q Consensus 145 ~a~~~a~~~---p~~v~~~il~~~~~ 167 (341)
+|..+|.+- ...+..++++++..
T Consensus 79 lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 79 LAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred HHHHHHHHHHHhhhccCceEEecCCC
Confidence 999999753 34588999999753
No 98
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.58 E-value=4.8e-13 Score=106.38 Aligned_cols=106 Identities=22% Similarity=0.281 Sum_probs=90.5
Q ss_pred CceEEEEcCCCCCCCcchhhHHHHHHh--cCceEEEEcCCCCCCCCCC-------CCCCccchHHHHHHHHHHhC-----
Q 038973 64 NHKIIIIHGFGSSKDLNLPVSQELIEE--LKIYFLSFDRPGYGESDPH-------PLRTVKTEACDVEQLADKLQ----- 129 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~~~~~~~~l~~~--~~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~dl~~~l~~l~----- 129 (341)
+..+|+++|.+|-.+.|..++..|.+. .++.|++..+.||-.++.. ..++++++++.-.++++.+-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 467999999999999999999999876 3789999999999877654 24689999888777777652
Q ss_pred CCCcEEEEEeccChHHHHHHHhhcc---ccccceeeecccccc
Q 038973 130 IGSKFYVIGISMGAYPVYGCLKYIP---QRLAGASLVVPFVHY 169 (341)
Q Consensus 130 ~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~~il~~~~~~~ 169 (341)
.+.+++++|||.|++++++++.+.+ .+|.+++++-|....
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIED 124 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcccc
Confidence 3478999999999999999999999 789999999998753
No 99
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.57 E-value=2.7e-13 Score=100.80 Aligned_cols=88 Identities=25% Similarity=0.331 Sum_probs=66.4
Q ss_pred EEEEcCCCCCCCcchh-hHHHHHHhcC--ceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccCh
Q 038973 67 IIIIHGFGSSKDLNLP-VSQELIEELK--IYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGA 143 (341)
Q Consensus 67 vl~~hG~~~~~~~~~~-~~~~l~~~~~--~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg 143 (341)
|+++||+.++..+... ...+..++++ ..+.++|++ ...++..+.+.++++.... +.+.|+|.||||
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~----------~~p~~a~~~l~~~i~~~~~-~~~~liGSSlGG 70 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP----------PFPEEAIAQLEQLIEELKP-ENVVLIGSSLGG 70 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC----------cCHHHHHHHHHHHHHhCCC-CCeEEEEEChHH
Confidence 7999999999888763 2333333323 456777765 3466777888899998876 579999999999
Q ss_pred HHHHHHHhhccccccceeeeccccc
Q 038973 144 YPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 144 ~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
..|..++.+++ +++ |++||...
T Consensus 71 ~~A~~La~~~~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 71 FYATYLAERYG--LPA-VLINPAVR 92 (187)
T ss_pred HHHHHHHHHhC--CCE-EEEcCCCC
Confidence 99999999885 444 89999763
No 100
>PRK10115 protease 2; Provisional
Probab=99.56 E-value=4.5e-13 Score=120.32 Aligned_cols=130 Identities=18% Similarity=0.103 Sum_probs=93.0
Q ss_pred CCCCCceEccCCcEEEEE-EccCC--CCCCCceEEEEcCCCCCCC--cchhhHHHHHHhcCceEEEEcCCCCCCCCCC--
Q 038973 37 PVTSPRIKLSDGRHVAYR-EAGVP--KEEANHKIIIIHGFGSSKD--LNLPVSQELIEELKIYFLSFDRPGYGESDPH-- 109 (341)
Q Consensus 37 ~~~~~~~~~~~g~~l~~~-~~g~~--~~~~~~~vl~~hG~~~~~~--~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~-- 109 (341)
..+..+++..||.+|.+. .+.++ .+.+.|.||++||..+... .|......|+++ ||.|+.++.||-|.-...
T Consensus 415 ~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~r-G~~v~~~n~RGs~g~G~~w~ 493 (686)
T PRK10115 415 RSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDR-GFVYAIVHVRGGGELGQQWY 493 (686)
T ss_pred EEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHC-CcEEEEEEcCCCCccCHHHH
Confidence 345556777899999873 33222 1234699999999887653 455666677776 999999999997765421
Q ss_pred -------CCCCccchHHHHHHHHHHhCC--CCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 110 -------PLRTVKTEACDVEQLADKLQI--GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 110 -------~~~~~~~~~~dl~~~l~~l~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
...+++|+.+-+..+++. +. .+++.+.|.|.||.++..++.++|++++++|...|..+
T Consensus 494 ~~g~~~~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D 560 (686)
T PRK10115 494 EDGKFLKKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560 (686)
T ss_pred HhhhhhcCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchh
Confidence 112455555544444443 32 26999999999999999999999999999999999764
No 101
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.54 E-value=7.5e-14 Score=109.90 Aligned_cols=120 Identities=20% Similarity=0.299 Sum_probs=100.8
Q ss_pred CCcEEEEEEccCCCC---CCCceEEEEcCCCCCCCcchhhHHHHHHh--------cCceEEEEcCCCCCCCCCCC--CCC
Q 038973 47 DGRHVAYREAGVPKE---EANHKIIIIHGFGSSKDLNLPVSQELIEE--------LKIYFLSFDRPGYGESDPHP--LRT 113 (341)
Q Consensus 47 ~g~~l~~~~~g~~~~---~~~~~vl~~hG~~~~~~~~~~~~~~l~~~--------~~~~vi~~D~~G~G~S~~~~--~~~ 113 (341)
.|.++|+....++.. +.-.|||++|||+|+...|..+++-|.+. +-|.||++.+||+|-|+.+. +.+
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn 211 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFN 211 (469)
T ss_pred cceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCcc
Confidence 799999988866532 23358999999999998888888877654 34889999999999999765 457
Q ss_pred ccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 114 VKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 114 ~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
..+.|.-+..++-.+|. +++.+-|-.||+.|+..+|..+|++|.|+-+-.+..
T Consensus 212 ~~a~ArvmrkLMlRLg~-nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~ 264 (469)
T KOG2565|consen 212 AAATARVMRKLMLRLGY-NKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFV 264 (469)
T ss_pred HHHHHHHHHHHHHHhCc-ceeEeecCchHHHHHHHHHhhcchhhhHhhhccccc
Confidence 77888889999999999 899999999999999999999999999877665543
No 102
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.54 E-value=3.1e-14 Score=126.20 Aligned_cols=110 Identities=23% Similarity=0.293 Sum_probs=88.5
Q ss_pred ceEccCCcEEEEEEccCCCC------CCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCC------
Q 038973 42 RIKLSDGRHVAYREAGVPKE------EANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPH------ 109 (341)
Q Consensus 42 ~~~~~~g~~l~~~~~g~~~~------~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~------ 109 (341)
.+...++.+++|...|.+.. ...|+||++||++++...|..+++.|.++ ||+|+++|+||||.|...
T Consensus 421 ~~~~p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~~-Gy~VIaiDlpGHG~S~~~~~~~~~ 499 (792)
T TIGR03502 421 LLTTPNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAAA-GVATIAIDHPLHGARSFDANASGV 499 (792)
T ss_pred EEEecCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHhC-CcEEEEeCCCCCCccccccccccc
Confidence 56666888888888765421 23468999999999999999999999876 899999999999999432
Q ss_pred ----C--------------CCCccchHHHHHHHHHHhC--------------C-CCcEEEEEeccChHHHHHHHhh
Q 038973 110 ----P--------------LRTVKTEACDVEQLADKLQ--------------I-GSKFYVIGISMGAYPVYGCLKY 152 (341)
Q Consensus 110 ----~--------------~~~~~~~~~dl~~~l~~l~--------------~-~~~~~lvGhS~Gg~~a~~~a~~ 152 (341)
. +.++++.+.|+..+...++ . ..+++++||||||.++..++..
T Consensus 500 ~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 500 NATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 1 1266888899988888776 1 2589999999999999999875
No 103
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.53 E-value=1.5e-12 Score=107.33 Aligned_cols=134 Identities=17% Similarity=0.161 Sum_probs=101.3
Q ss_pred CCCCCCCCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhh-----HHHHHHhcCceEEEEcCCCCCCCC
Q 038973 33 PGGPPVTSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPV-----SQELIEELKIYFLSFDRPGYGESD 107 (341)
Q Consensus 33 ~~~~~~~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~-----~~~l~~~~~~~vi~~D~~G~G~S~ 107 (341)
..+.+.+++.+++.||..+.....-.+. .++|+|++.||+.+++..|-.. ...+..+.||.|+.-+.||...|.
T Consensus 43 ~~gy~~E~h~V~T~DgYiL~lhRIp~~~-~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr 121 (403)
T KOG2624|consen 43 KYGYPVEEHEVTTEDGYILTLHRIPRGK-KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSR 121 (403)
T ss_pred HcCCceEEEEEEccCCeEEEEeeecCCC-CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccch
Confidence 3456789999999999987777664333 5789999999999999999632 334444459999999999977775
Q ss_pred CCC-----------CCCccchHH-HHHHHHH----HhCCCCcEEEEEeccChHHHHHHHhhccc---cccceeeeccccc
Q 038973 108 PHP-----------LRTVKTEAC-DVEQLAD----KLQIGSKFYVIGISMGAYPVYGCLKYIPQ---RLAGASLVVPFVH 168 (341)
Q Consensus 108 ~~~-----------~~~~~~~~~-dl~~~l~----~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~~il~~~~~~ 168 (341)
+.. ++++++++. ||-+.++ ..+. ++++.+|||.|+.....++...|+ +|+.+++++|.+.
T Consensus 122 ~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~-~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 122 KHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQ-EKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAF 200 (403)
T ss_pred hhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccc-cceEEEEEEccchhheehhcccchhhhhhheeeeecchhh
Confidence 211 135555543 5555544 4466 799999999999999998888775 7999999999873
No 104
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.51 E-value=2.5e-12 Score=94.94 Aligned_cols=256 Identities=13% Similarity=0.129 Sum_probs=140.0
Q ss_pred CceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC----CCCccc
Q 038973 41 PRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP----LRTVKT 116 (341)
Q Consensus 41 ~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~----~~~~~~ 116 (341)
-.+...||..+....+-.. ++....++.-.+.+.....|++++..+.+. ||.|+++|+||.|.|.+.. .+.+.|
T Consensus 8 ~~l~~~DG~~l~~~~~pA~-~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~-Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~D 85 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPAD-GKASGRLVVAGATGVGQYFYRRFAAAAAKA-GFEVLTFDYRGIGQSRPASLSGSQWRYLD 85 (281)
T ss_pred cccccCCCccCccccccCC-CCCCCcEEecccCCcchhHhHHHHHHhhcc-CceEEEEecccccCCCccccccCccchhh
Confidence 3456669988888777432 233345666666666677777887766655 9999999999999998544 235555
Q ss_pred hHH-HHHHHHHHhC---CCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhh
Q 038973 117 EAC-DVEQLADKLQ---IGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQR 192 (341)
Q Consensus 117 ~~~-dl~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (341)
++. |+.+.++.++ .+.+.+.||||+||.+.-.+. +++ +..+....+.... +...+... +.+
T Consensus 86 wA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gag-----wsg~m~~~--------~~l 150 (281)
T COG4757 86 WARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAG-----WSGWMGLR--------ERL 150 (281)
T ss_pred hhhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEeccccc-----cccchhhh--------hcc
Confidence 543 5555555543 236899999999999865444 445 5655555554322 11100000 000
Q ss_pred hHHHhhh-chhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccC
Q 038973 193 TFRIAYY-FPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFD 271 (341)
Q Consensus 193 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (341)
....... .......+. ..++... ....+.++.......+.+...+..........
T Consensus 151 ~~~~l~~lv~p~lt~w~--g~~p~~l--~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~-------------------- 206 (281)
T COG4757 151 GAVLLWNLVGPPLTFWK--GYMPKDL--LGLGSDLPGTVMRDWARWCRHPRYYFDDPAMR-------------------- 206 (281)
T ss_pred cceeeccccccchhhcc--ccCcHhh--cCCCccCcchHHHHHHHHhcCccccccChhHh--------------------
Confidence 0000000 000000000 0111000 01111223233333344433332111000000
Q ss_pred CCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEE--EEecC----CCcccccC-H-HHHHHHHHHHh
Q 038973 272 PTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQY--HEVPD----AGHLFIFE-R-KFCEAIIRALL 339 (341)
Q Consensus 272 ~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~--~~~~~----~gH~~~~e-p-~~~~~~i~~fl 339 (341)
.+++-...+.+|+.++...+|+.+|+...+.+.+..+|+.+ +.++. .||+-... + |.+.+.+.+|+
T Consensus 207 --~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 207 --NYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred --HHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 11222445666799999999999999999999999988644 33443 59988875 4 66666666665
No 105
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.50 E-value=9.9e-13 Score=106.13 Aligned_cols=251 Identities=11% Similarity=0.072 Sum_probs=137.9
Q ss_pred CCceEEEEcCCCCCCCcch-----hhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchH-----HHHHHHHHHhCCCC
Q 038973 63 ANHKIIIIHGFGSSKDLNL-----PVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEA-----CDVEQLADKLQIGS 132 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~-----~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~-----~dl~~~l~~l~~~~ 132 (341)
-++|+|++|.+-.....|+ +++..+.++ |..|+.+|+++-..+.. ..+++++. +.+..+.+..+. +
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~-g~~vfvIsw~nPd~~~~--~~~~edYi~e~l~~aid~v~~itg~-~ 181 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQ-GLDVFVISWRNPDASLA--AKNLEDYILEGLSEAIDTVKDITGQ-K 181 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHc-CCceEEEeccCchHhhh--hccHHHHHHHHHHHHHHHHHHHhCc-c
Confidence 4679999999988877776 677778776 99999999997666543 33555555 445555566677 8
Q ss_pred cEEEEEeccChHHHHHHHhhcccc-ccceeeecccccccCCCCCccchhh-hhhcCcchhhhhHHHhhhchhhhHHhhhc
Q 038973 133 KFYVIGISMGAYPVYGCLKYIPQR-LAGASLVVPFVHYWWPCLPANLSRE-ALQRLPVENQRTFRIAYYFPWLLNLWMSQ 210 (341)
Q Consensus 133 ~~~lvGhS~Gg~~a~~~a~~~p~~-v~~~il~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (341)
++.++|+|.||+++..+++.++.+ |++++++.+..++..++........ ...... ........++...-.....
T Consensus 182 ~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~----~~i~~~g~lpg~~ma~~F~ 257 (445)
T COG3243 182 DINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALD----ADIVQKGILPGWYMAIVFF 257 (445)
T ss_pred ccceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHH----hhhhhccCCChHHHHHHHH
Confidence 999999999999999999988887 9999999988876433221111111 000000 0000011111111100000
Q ss_pred ccccccc----cccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCccE
Q 038973 211 KWFPTLS----IMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEGSV 286 (341)
Q Consensus 211 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Pv 286 (341)
-+.+... +.......-.+...+... ...+...........-+...+..+.... ..| ........+.+|+||+
T Consensus 258 mLrpndliw~~fV~nyl~ge~pl~fdlly-Wn~dst~~~~~~~~~~Lrn~y~~N~l~~-g~~--~v~G~~VdL~~It~pv 333 (445)
T COG3243 258 LLRPNDLIWNYFVNNYLDGEQPLPFDLLY-WNADSTRLPGAAHSEYLRNFYLENRLIR-GGL--EVSGTMVDLGDITCPV 333 (445)
T ss_pred hcCccccchHHHHHHhcCCCCCCchhHHH-hhCCCccCchHHHHHHHHHHHHhChhhc-cce--EECCEEechhhcccce
Confidence 0001000 000000000011111111 1111111111111111111111111111 222 2223344577899999
Q ss_pred EEEEeecCCCCChHHHHHHHhhCCC-cEEEEecCCCccccc
Q 038973 287 HIWQGCEDRIIPSQINQFISEKLPW-IQYHEVPDAGHLFIF 326 (341)
Q Consensus 287 lii~g~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~gH~~~~ 326 (341)
+++.|++|.+.|.+.....++.+++ .+++.. ++||....
T Consensus 334 y~~a~~~DhI~P~~Sv~~g~~l~~g~~~f~l~-~sGHIa~v 373 (445)
T COG3243 334 YNLAAEEDHIAPWSSVYLGARLLGGEVTFVLS-RSGHIAGV 373 (445)
T ss_pred EEEeecccccCCHHHHHHHHHhcCCceEEEEe-cCceEEEE
Confidence 9999999999999999999999988 455555 58996554
No 106
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.49 E-value=1.6e-11 Score=91.58 Aligned_cols=228 Identities=17% Similarity=0.143 Sum_probs=118.3
Q ss_pred CceEccCCcEEEEEEccCCCC--CCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCC-CCCCC-CCCCCccc
Q 038973 41 PRIKLSDGRHVAYREAGVPKE--EANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGY-GESDP-HPLRTVKT 116 (341)
Q Consensus 41 ~~~~~~~g~~l~~~~~g~~~~--~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~-G~S~~-~~~~~~~~ 116 (341)
+-+...+|.+|+.++.-|..+ ...++||+.+|++-....+..++.+|+.. ||+|+.+|...| |.|++ ...+++..
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~N-GFhViRyDsl~HvGlSsG~I~eftms~ 83 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSAN-GFHVIRYDSLNHVGLSSGDINEFTMSI 83 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHTT-T--EEEE---B-------------HHH
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhhC-CeEEEeccccccccCCCCChhhcchHH
Confidence 457778999999988865432 34589999999999999999999999887 999999997765 77765 34578888
Q ss_pred hHHHHHHHHHHh---CCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhh
Q 038973 117 EACDVEQLADKL---QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRT 193 (341)
Q Consensus 117 ~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (341)
..+++..+++.+ |. .++.|+.-|+.|.+|+..+.+ + .+.-+|...+.++. +....+...
T Consensus 84 g~~sL~~V~dwl~~~g~-~~~GLIAaSLSaRIAy~Va~~-i-~lsfLitaVGVVnl----------r~TLe~al~----- 145 (294)
T PF02273_consen 84 GKASLLTVIDWLATRGI-RRIGLIAASLSARIAYEVAAD-I-NLSFLITAVGVVNL----------RDTLEKALG----- 145 (294)
T ss_dssp HHHHHHHHHHHHHHTT----EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-H----------HHHHHHHHS-----
T ss_pred hHHHHHHHHHHHHhcCC-CcchhhhhhhhHHHHHHHhhc-c-CcceEEEEeeeeeH----------HHHHHHHhc-----
Confidence 888888887766 66 789999999999999999985 3 47777777766531 111100000
Q ss_pred HHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCC
Q 038973 194 FRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPT 273 (341)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (341)
+-+........... .......-...-++....+.. |. +..
T Consensus 146 ------------~Dyl~~~i~~lp~d-ldfeGh~l~~~vFv~dc~e~~--------------------------w~-~l~ 185 (294)
T PF02273_consen 146 ------------YDYLQLPIEQLPED-LDFEGHNLGAEVFVTDCFEHG--------------------------WD-DLD 185 (294)
T ss_dssp ------------S-GGGS-GGG--SE-EEETTEEEEHHHHHHHHHHTT---------------------------S-SHH
T ss_pred ------------cchhhcchhhCCCc-ccccccccchHHHHHHHHHcC--------------------------Cc-cch
Confidence 00000000000000 000000000111111111111 10 000
Q ss_pred CCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhC--CCcEEEEecCCCcccccC
Q 038973 274 DLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKL--PWIQYHEVPDAGHLFIFE 327 (341)
Q Consensus 274 ~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~--~~~~~~~~~~~gH~~~~e 327 (341)
.....+..+.+|++.+++++|.++......++.+.+ +..++..++|++|-.-..
T Consensus 186 ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~en 241 (294)
T PF02273_consen 186 STINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLGEN 241 (294)
T ss_dssp HHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TTSS
T ss_pred hHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhhhC
Confidence 111124556777999999999999999888888866 457999999999988765
No 107
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.46 E-value=4.8e-12 Score=98.31 Aligned_cols=94 Identities=23% Similarity=0.264 Sum_probs=66.3
Q ss_pred EEEEcCCCC---CCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHh---------CCCCcE
Q 038973 67 IIIIHGFGS---SKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKL---------QIGSKF 134 (341)
Q Consensus 67 vl~~hG~~~---~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l---------~~~~~~ 134 (341)
||++||.+. +......++..++++.|+.|+.+|+|=. +...+.+..+|+.+.++.+ +. +++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~------p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~-~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA------PEAPFPAALEDVKAAYRWLLKNADKLGIDP-ERI 73 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T------TTSSTTHHHHHHHHHHHHHHHTHHHHTEEE-EEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc------ccccccccccccccceeeeccccccccccc-cce
Confidence 789999874 4455557778888766999999999943 2345566666666555443 33 699
Q ss_pred EEEEeccChHHHHHHHhhccc----cccceeeecccc
Q 038973 135 YVIGISMGAYPVYGCLKYIPQ----RLAGASLVVPFV 167 (341)
Q Consensus 135 ~lvGhS~Gg~~a~~~a~~~p~----~v~~~il~~~~~ 167 (341)
+++|+|.||.+++.++....+ .++++++++|..
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred EEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 999999999999999876443 389999999864
No 108
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.45 E-value=3e-11 Score=83.81 Aligned_cols=102 Identities=21% Similarity=0.189 Sum_probs=73.8
Q ss_pred CCceEEEEcCCCCCCC--cchhhHHHHHHhcCceEEEEcCCCCCC-----CCCCC-CC-CccchHHHHHHHHHHhCCCCc
Q 038973 63 ANHKIIIIHGFGSSKD--LNLPVSQELIEELKIYFLSFDRPGYGE-----SDPHP-LR-TVKTEACDVEQLADKLQIGSK 133 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~--~~~~~~~~l~~~~~~~vi~~D~~G~G~-----S~~~~-~~-~~~~~~~dl~~~l~~l~~~~~ 133 (341)
...+||+.||.+.+.+ ....++..++.. |+.|..++++-.-. -.+++ .. -..++...+.++...+.- .+
T Consensus 13 ~~~tilLaHGAGasmdSt~m~~~a~~la~~-G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~-gp 90 (213)
T COG3571 13 APVTILLAHGAGASMDSTSMTAVAAALARR-GWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAE-GP 90 (213)
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHhC-ceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccC-Cc
Confidence 4568999999987754 455677777766 99999999875432 11222 12 345566667777777765 69
Q ss_pred EEEEEeccChHHHHHHHhhccccccceeeeccc
Q 038973 134 FYVIGISMGAYPVYGCLKYIPQRLAGASLVVPF 166 (341)
Q Consensus 134 ~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~ 166 (341)
.++-|+||||.++..++..-...|+++++++-+
T Consensus 91 Li~GGkSmGGR~aSmvade~~A~i~~L~clgYP 123 (213)
T COG3571 91 LIIGGKSMGGRVASMVADELQAPIDGLVCLGYP 123 (213)
T ss_pred eeeccccccchHHHHHHHhhcCCcceEEEecCc
Confidence 999999999999998887655569999998854
No 109
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.43 E-value=2.8e-11 Score=96.60 Aligned_cols=240 Identities=15% Similarity=0.152 Sum_probs=129.6
Q ss_pred CCCceEEEEcCCCCCCCcch-hh-HHHHHHhcCceEEEEcCCCCCCCCCCCCC-----Cccch-------HHH---HHHH
Q 038973 62 EANHKIIIIHGFGSSKDLNL-PV-SQELIEELKIYFLSFDRPGYGESDPHPLR-----TVKTE-------ACD---VEQL 124 (341)
Q Consensus 62 ~~~~~vl~~hG~~~~~~~~~-~~-~~~l~~~~~~~vi~~D~~G~G~S~~~~~~-----~~~~~-------~~d---l~~~ 124 (341)
+.+|.+|.++|.|.+....+ .+ +..|.++ |+.-+.+..|-||.-.+.... +..|+ +.+ |..+
T Consensus 90 ~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHGFWRRRRLMARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCCceEEEecCCCccchhhhhhhhhhHHHHc-CcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 45788889999988655444 33 6778877 999999999999976543311 11111 122 3344
Q ss_pred HHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhhchhhh
Q 038973 125 ADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYYFPWLL 204 (341)
Q Consensus 125 l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (341)
++..|. .++.+.|.||||.+|...+..+|..+..+-++++.... .......+.... .|......+.
T Consensus 169 l~~~G~-~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs------~vFt~Gvls~~i---~W~~L~~q~~---- 234 (348)
T PF09752_consen 169 LEREGY-GPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSAS------VVFTEGVLSNSI---NWDALEKQFE---- 234 (348)
T ss_pred HHhcCC-CceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCC------cchhhhhhhcCC---CHHHHHHHhc----
Confidence 445577 69999999999999999999999877766666654311 000000000000 0110000000
Q ss_pred HHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCCCCCCc
Q 038973 205 NLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPFPDNEG 284 (341)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 284 (341)
...+... ...................... ......+ ........ +..+... +.-.-
T Consensus 235 -----~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-------~Ea~~~m-~~~md~~T----~l~nf~~--P~dp~ 290 (348)
T PF09752_consen 235 -----DTVYEEE-----ISDIPAQNKSLPLDSMEERRRD-------REALRFM-RGVMDSFT----HLTNFPV--PVDPS 290 (348)
T ss_pred -----ccchhhh-----hcccccCcccccchhhccccch-------HHHHHHH-HHHHHhhc----cccccCC--CCCCC
Confidence 0000000 0000000000000000000000 0000000 00111111 1112222 22223
Q ss_pred cEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCccccc--CHHHHHHHHHHHhhC
Q 038973 285 SVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIF--ERKFCEAIIRALLVR 341 (341)
Q Consensus 285 Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~--ep~~~~~~i~~fl~~ 341 (341)
.+.++.+++|..+|.+....+.+..|++++..++| ||.--+ ..+.+.+.|.+-++|
T Consensus 291 ~ii~V~A~~DaYVPr~~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~R 348 (348)
T PF09752_consen 291 AIIFVAAKNDAYVPRHGVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYDAFER 348 (348)
T ss_pred cEEEEEecCceEechhhcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHHHhhC
Confidence 38899999999999999999999999999999996 996543 388888888887765
No 110
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.43 E-value=3e-12 Score=100.51 Aligned_cols=99 Identities=21% Similarity=0.292 Sum_probs=62.7
Q ss_pred CCceEEEEcCCCCCCC---cchhhHHHHHHhcCceEEEEcCC----CCCCCCCCCCCCccchHHHHHHHHHHhC------
Q 038973 63 ANHKIIIIHGFGSSKD---LNLPVSQELIEELKIYFLSFDRP----GYGESDPHPLRTVKTEACDVEQLADKLQ------ 129 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~---~~~~~~~~l~~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~dl~~~l~~l~------ 129 (341)
.+..||||.|.+..-. ....++..|.. .+|.|+-+-++ |+|.+ +++.-++||.++++.+.
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~-~~wsl~q~~LsSSy~G~G~~------SL~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEE-TGWSLFQVQLSSSYSGWGTS------SLDRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT--TT-EEEEE--GGGBTTS-S--------HHHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhcc-CCeEEEEEEecCccCCcCcc------hhhhHHHHHHHHHHHHHHhhccc
Confidence 4568999999976532 33355555533 48999998866 44433 68888888888887652
Q ss_pred -CCCcEEEEEeccChHHHHHHHhhcc-----ccccceeeeccccc
Q 038973 130 -IGSKFYVIGISMGAYPVYGCLKYIP-----QRLAGASLVVPFVH 168 (341)
Q Consensus 130 -~~~~~~lvGhS~Gg~~a~~~a~~~p-----~~v~~~il~~~~~~ 168 (341)
..++|+|+|||.|..-+++|+.... ..|+++|+-+|..+
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 1268999999999999999987642 57999999999754
No 111
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.41 E-value=3.6e-11 Score=85.34 Aligned_cols=90 Identities=18% Similarity=0.210 Sum_probs=63.4
Q ss_pred ceEEEEcCCCCCC-CcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccCh
Q 038973 65 HKIIIIHGFGSSK-DLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGA 143 (341)
Q Consensus 65 ~~vl~~hG~~~~~-~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg 143 (341)
+.+|++||+.+|. ..|... +..+.. .+-.+++. .+.....+++++.+...+... . ++++||+||+|+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~---we~~l~-~a~rveq~------~w~~P~~~dWi~~l~~~v~a~-~-~~~vlVAHSLGc 70 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSR---WESALP-NARRVEQD------DWEAPVLDDWIARLEKEVNAA-E-GPVVLVAHSLGC 70 (181)
T ss_pred ceEEEecCCCCCChhHHHHH---HHhhCc-cchhcccC------CCCCCCHHHHHHHHHHHHhcc-C-CCeEEEEecccH
Confidence 4789999998774 455533 222211 12223332 122236778888777777776 3 579999999999
Q ss_pred HHHHHHHhhccccccceeeeccc
Q 038973 144 YPVYGCLKYIPQRLAGASLVVPF 166 (341)
Q Consensus 144 ~~a~~~a~~~p~~v~~~il~~~~ 166 (341)
..+++++.+...+|+|+++++|+
T Consensus 71 ~~v~h~~~~~~~~V~GalLVApp 93 (181)
T COG3545 71 ATVAHWAEHIQRQVAGALLVAPP 93 (181)
T ss_pred HHHHHHHHhhhhccceEEEecCC
Confidence 99999998877799999999986
No 112
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.39 E-value=9.5e-12 Score=100.24 Aligned_cols=122 Identities=16% Similarity=0.124 Sum_probs=85.3
Q ss_pred CCcEEEEEEccC--CCCCCCceEEEEcCCCCCCCcchh---h-------HHHHHHhcCceEEEEcCCCCCCCCCCCCCCc
Q 038973 47 DGRHVAYREAGV--PKEEANHKIIIIHGFGSSKDLNLP---V-------SQELIEELKIYFLSFDRPGYGESDPHPLRTV 114 (341)
Q Consensus 47 ~g~~l~~~~~g~--~~~~~~~~vl~~hG~~~~~~~~~~---~-------~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~ 114 (341)
||.+|+...+-| ..+.+-|+||..|+++.+...-.. . ...+.++ ||.|+..|.||.|.|+.......
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~-GY~vV~~D~RG~g~S~G~~~~~~ 79 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAER-GYAVVVQDVRGTGGSEGEFDPMS 79 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHT-T-EEEEEE-TTSTTS-S-B-TTS
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhC-CCEEEEECCcccccCCCccccCC
Confidence 688898888866 555566889999999865411111 1 1126655 99999999999999986554435
Q ss_pred cchHHHHHHHHHHhC---C-CCcEEEEEeccChHHHHHHHhhccccccceeeecccccc
Q 038973 115 KTEACDVEQLADKLQ---I-GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHY 169 (341)
Q Consensus 115 ~~~~~dl~~~l~~l~---~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 169 (341)
..-++|..++++.+. . +.+|.++|.|++|..++.+|...|..+++++...+..+.
T Consensus 80 ~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~ 138 (272)
T PF02129_consen 80 PNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDL 138 (272)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBT
T ss_pred hhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcc
Confidence 666777777777662 2 248999999999999999999888899999999887654
No 113
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.39 E-value=1.6e-11 Score=120.43 Aligned_cols=100 Identities=11% Similarity=0.012 Sum_probs=86.3
Q ss_pred CceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccCh
Q 038973 64 NHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGA 143 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg 143 (341)
+++++++||++++...|..+.+.|.. ++.|+++|.+|+|.+. ...++++++++++.+.++.+....+++++|||+||
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~~--~~~v~~~~~~g~~~~~-~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg 1144 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLDP--QWSIYGIQSPRPDGPM-QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGG 1144 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcCC--CCcEEEEECCCCCCCC-CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhh
Confidence 36899999999999999999988865 5779999999998763 34579999999999999887654589999999999
Q ss_pred HHHHHHHhh---ccccccceeeeccc
Q 038973 144 YPVYGCLKY---IPQRLAGASLVVPF 166 (341)
Q Consensus 144 ~~a~~~a~~---~p~~v~~~il~~~~ 166 (341)
.++..+|.+ .++++..++++++.
T Consensus 1145 ~vA~e~A~~l~~~~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1145 TLAQGIAARLRARGEEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHHHHHHHcCCceeEEEEecCC
Confidence 999999985 47789999999874
No 114
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.38 E-value=2.1e-11 Score=92.94 Aligned_cols=116 Identities=19% Similarity=0.176 Sum_probs=77.5
Q ss_pred EEEEccCCCC--CCCceEEEEcCCCCCCCcchh--hHHHHHHhcCceEEEEcCCCCCCCC----C--CC----CCCccch
Q 038973 52 AYREAGVPKE--EANHKIIIIHGFGSSKDLNLP--VSQELIEELKIYFLSFDRPGYGESD----P--HP----LRTVKTE 117 (341)
Q Consensus 52 ~~~~~g~~~~--~~~~~vl~~hG~~~~~~~~~~--~~~~l~~~~~~~vi~~D~~G~G~S~----~--~~----~~~~~~~ 117 (341)
.|+.+-|+.. .+.|.||++||.+++...+.. -...++++.||.|+.|+........ . .. ......+
T Consensus 2 ~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i 81 (220)
T PF10503_consen 2 SYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFI 81 (220)
T ss_pred cEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhH
Confidence 4666644321 235889999999999877653 3457888889999999864221111 0 00 0122222
Q ss_pred HHHHHHHHHHhCCC-CcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 118 ACDVEQLADKLQIG-SKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 118 ~~dl~~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
++.+..+.++.+++ ++|++.|+|.||+++..++..+|+.+.++...++..
T Consensus 82 ~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 82 AALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred HHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 33334444444442 699999999999999999999999999988888753
No 115
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.37 E-value=3e-11 Score=109.46 Aligned_cols=82 Identities=13% Similarity=-0.012 Sum_probs=65.2
Q ss_pred HHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCC-------------------CCcEEEEEeccChHH
Q 038973 85 QELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQI-------------------GSKFYVIGISMGAYP 145 (341)
Q Consensus 85 ~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~-------------------~~~~~lvGhS~Gg~~ 145 (341)
..+..+ ||.|+..|.||+|.|++.......+-.+|..++++.+.- +.+|.++|.|+||.+
T Consensus 273 ~~~~~r-GYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 273 DYFLPR-GFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred HHHHhC-CeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 455554 999999999999999875433224556777777776641 369999999999999
Q ss_pred HHHHHhhccccccceeeecccc
Q 038973 146 VYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 146 a~~~a~~~p~~v~~~il~~~~~ 167 (341)
++.+|...|..++++|..++..
T Consensus 352 ~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 352 PNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHHhhCCCcceEEEeeCCCC
Confidence 9999998888999999988764
No 116
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.37 E-value=4.6e-10 Score=92.57 Aligned_cols=116 Identities=19% Similarity=0.127 Sum_probs=78.8
Q ss_pred CCcEEEEEEccC--CCCCCCceEEEEcCCC---CCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHH
Q 038973 47 DGRHVAYREAGV--PKEEANHKIIIIHGFG---SSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDV 121 (341)
Q Consensus 47 ~g~~l~~~~~g~--~~~~~~~~vl~~hG~~---~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl 121 (341)
++..+.++.+.+ ......|+||++||.+ ++.......+..+....|+.|+.+|+|-.-+- .+....+|+
T Consensus 60 ~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~------~~p~~~~d~ 133 (312)
T COG0657 60 SGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH------PFPAALEDA 133 (312)
T ss_pred CCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC------CCCchHHHH
Confidence 444455666655 3333579999999987 44555557777887777999999999954332 333344443
Q ss_pred HHHH----HH---hCC-CCcEEEEEeccChHHHHHHHhhccc----cccceeeeccccc
Q 038973 122 EQLA----DK---LQI-GSKFYVIGISMGAYPVYGCLKYIPQ----RLAGASLVVPFVH 168 (341)
Q Consensus 122 ~~~l----~~---l~~-~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~~il~~~~~~ 168 (341)
.+.+ ++ ++. .+++.++|+|.||.+++.++..-.+ ...+.+++.|...
T Consensus 134 ~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d 192 (312)
T COG0657 134 YAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLD 192 (312)
T ss_pred HHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccC
Confidence 3333 23 232 2789999999999999998876443 4678888888754
No 117
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.36 E-value=1.4e-11 Score=105.44 Aligned_cols=127 Identities=16% Similarity=0.183 Sum_probs=87.5
Q ss_pred CCCceEccC---CcEEEEEEccCC-CCCCCceEEEEcCCCCCCCcchhhH-----------HH-------HHHhcCceEE
Q 038973 39 TSPRIKLSD---GRHVAYREAGVP-KEEANHKIIIIHGFGSSKDLNLPVS-----------QE-------LIEELKIYFL 96 (341)
Q Consensus 39 ~~~~~~~~~---g~~l~~~~~g~~-~~~~~~~vl~~hG~~~~~~~~~~~~-----------~~-------l~~~~~~~vi 96 (341)
...++.+.+ +..++|+.+.+. ...+.|.||+++|.++++..+..+. .. ..+ ...++
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~--~~~~l 125 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN--EAYVI 125 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc--ccCeE
Confidence 455666643 577888877643 2345799999999998876552111 00 111 24599
Q ss_pred EEcCC-CCCCCCCCC---CCCccchHHHHHHHHHHh-------CCCCcEEEEEeccChHHHHHHHhhc----------cc
Q 038973 97 SFDRP-GYGESDPHP---LRTVKTEACDVEQLADKL-------QIGSKFYVIGISMGAYPVYGCLKYI----------PQ 155 (341)
Q Consensus 97 ~~D~~-G~G~S~~~~---~~~~~~~~~dl~~~l~~l-------~~~~~~~lvGhS~Gg~~a~~~a~~~----------p~ 155 (341)
.+|.| |+|.|.... ..+.++.++|+.++++.+ +. .+++|+|||+||..+..+|..- +-
T Consensus 126 ~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~-~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~i 204 (462)
T PTZ00472 126 YVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRA-NDLFVVGESYGGHYAPATAYRINMGNKKGDGLYI 204 (462)
T ss_pred EEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccC-CCEEEEeecchhhhHHHHHHHHHhhccccCCcee
Confidence 99965 899886432 235578899998888754 33 7999999999999887777542 12
Q ss_pred cccceeeeccccc
Q 038973 156 RLAGASLVVPFVH 168 (341)
Q Consensus 156 ~v~~~il~~~~~~ 168 (341)
.++++++-++...
T Consensus 205 nLkGi~IGNg~~d 217 (462)
T PTZ00472 205 NLAGLAVGNGLTD 217 (462)
T ss_pred eeEEEEEeccccC
Confidence 5789999988765
No 118
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=7.3e-11 Score=106.65 Aligned_cols=223 Identities=15% Similarity=0.141 Sum_probs=138.8
Q ss_pred CCCCceEccCCcEEEEEEccCCC---CCCCceEEEEcCCCCCCCc---ch-hhHHHHHHhcCceEEEEcCCCCCCCCCCC
Q 038973 38 VTSPRIKLSDGRHVAYREAGVPK---EEANHKIIIIHGFGSSKDL---NL-PVSQELIEELKIYFLSFDRPGYGESDPHP 110 (341)
Q Consensus 38 ~~~~~~~~~~g~~l~~~~~g~~~---~~~~~~vl~~hG~~~~~~~---~~-~~~~~l~~~~~~~vi~~D~~G~G~S~~~~ 110 (341)
.+-..+.. +|...++...-|+. .+.-|.+|.+||.+++... |. .+...+....|+.|+.+|.||.|.....-
T Consensus 498 ~~~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~ 576 (755)
T KOG2100|consen 498 VEFGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDF 576 (755)
T ss_pred ceeEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhH
Confidence 34445555 88888888876632 2334677888999874322 11 33344566679999999999998765321
Q ss_pred ---------CCCccchHHHHHHHHHHhCCC-CcEEEEEeccChHHHHHHHhhccccccce-eeecccccccCCCCCccch
Q 038973 111 ---------LRTVKTEACDVEQLADKLQIG-SKFYVIGISMGAYPVYGCLKYIPQRLAGA-SLVVPFVHYWWPCLPANLS 179 (341)
Q Consensus 111 ---------~~~~~~~~~dl~~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~-il~~~~~~~~~~~~~~~~~ 179 (341)
....+|+...+..+++..-++ +++.++|+|.||.+++.++...|+.+-++ +.++|.++.. ......
T Consensus 577 ~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~---~yds~~ 653 (755)
T KOG2100|consen 577 RSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL---YYDSTY 653 (755)
T ss_pred HHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee---eecccc
Confidence 124556666666666654332 68999999999999999999998665555 9999986421 000000
Q ss_pred hhhhhcCcchhhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHH
Q 038973 180 REALQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYR 259 (341)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (341)
..++ ..........+.+
T Consensus 654 -----------------------------tery-----------mg~p~~~~~~y~e----------------------- 670 (755)
T KOG2100|consen 654 -----------------------------TERY-----------MGLPSENDKGYEE----------------------- 670 (755)
T ss_pred -----------------------------cHhh-----------cCCCccccchhhh-----------------------
Confidence 0000 0000000000000
Q ss_pred HHhhcccccccCCCCCCCCCCCCCccE-EEEEeecCCCCChHHHHHHHhhCC----CcEEEEecCCCcccccC--HHHHH
Q 038973 260 DLKTGYAKWEFDPTDLINPFPDNEGSV-HIWQGCEDRIIPSQINQFISEKLP----WIQYHEVPDAGHLFIFE--RKFCE 332 (341)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~i~~Pv-lii~g~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e--p~~~~ 332 (341)
.....++..++.|. |++||+.|..++.+.+..+.+.+. ..++.++|+.+|.+..- -..+.
T Consensus 671 -------------~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~ 737 (755)
T KOG2100|consen 671 -------------SSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLY 737 (755)
T ss_pred -------------ccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHH
Confidence 01222233344445 999999999999988888877662 27899999999988763 35555
Q ss_pred HHHHHHhh
Q 038973 333 AIIRALLV 340 (341)
Q Consensus 333 ~~i~~fl~ 340 (341)
..+..|+.
T Consensus 738 ~~~~~~~~ 745 (755)
T KOG2100|consen 738 EKLDRFLR 745 (755)
T ss_pred HHHHHHHH
Confidence 66666653
No 119
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.34 E-value=5.5e-11 Score=92.80 Aligned_cols=105 Identities=19% Similarity=0.277 Sum_probs=69.7
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHhcCc----eEEEEcCCCC----CCCC---CCC---------C-CCccchHHHH
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEELKI----YFLSFDRPGY----GESD---PHP---------L-RTVKTEACDV 121 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~----~vi~~D~~G~----G~S~---~~~---------~-~~~~~~~~dl 121 (341)
...|.||+||++++...+..++..+..+.+. -++.++.-|+ |.=. ..+ . .+....++++
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 3468999999999999999999999722232 1344444442 2111 111 1 2466788888
Q ss_pred HHHHHHh----CCCCcEEEEEeccChHHHHHHHhhccc-----cccceeeeccccc
Q 038973 122 EQLADKL----QIGSKFYVIGISMGAYPVYGCLKYIPQ-----RLAGASLVVPFVH 168 (341)
Q Consensus 122 ~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~~il~~~~~~ 168 (341)
..++..| ++ +++.+|||||||..++.++..+.. ++.++|.+++++.
T Consensus 90 ~~vl~~L~~~Y~~-~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 90 KKVLKYLKKKYHF-KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHCC---SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred HHHHHHHHHhcCC-CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 8888777 56 799999999999999999887532 6899999998754
No 120
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.30 E-value=1.1e-10 Score=90.18 Aligned_cols=102 Identities=16% Similarity=0.153 Sum_probs=71.9
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCC-CCCCccchHHHHHHHHH-Hh------CCCCcE
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPH-PLRTVKTEACDVEQLAD-KL------QIGSKF 134 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~-~~~~~~~~~~dl~~~l~-~l------~~~~~~ 134 (341)
.=|++||+||+......|..++++++.. ||.|+.+|+...+..... ......+..+++.+=++ .+ +. .++
T Consensus 16 ~yPVv~f~~G~~~~~s~Ys~ll~hvASh-GyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~-s~l 93 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWYSQLLEHVASH-GYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDF-SKL 93 (259)
T ss_pred CcCEEEEeCCcCCCHHHHHHHHHHHHhC-ceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccc-cce
Confidence 3489999999998777788999999886 999999996654332110 00122222222222111 11 23 589
Q ss_pred EEEEeccChHHHHHHHhhc-----cccccceeeeccc
Q 038973 135 YVIGISMGAYPVYGCLKYI-----PQRLAGASLVVPF 166 (341)
Q Consensus 135 ~lvGhS~Gg~~a~~~a~~~-----p~~v~~~il~~~~ 166 (341)
.|.|||-||-++..++..+ +.+++++++++|.
T Consensus 94 ~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 94 ALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred EEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 9999999999999988887 5689999999996
No 121
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.26 E-value=3.7e-11 Score=92.68 Aligned_cols=165 Identities=19% Similarity=0.211 Sum_probs=87.4
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHh---cCceEEEEcCCCC-----CCCC-----------CCC-------------
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEE---LKIYFLSFDRPGY-----GESD-----------PHP------------- 110 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~---~~~~vi~~D~~G~-----G~S~-----------~~~------------- 110 (341)
.++.||++||++.++..++.....|.+. .++.++.+|-|-- |-.. ..+
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 4678999999999999998555544432 2467777775421 1110 000
Q ss_pred CCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhcc--------ccccceeeecccccccCCCCCccchhhh
Q 038973 111 LRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIP--------QRLAGASLVVPFVHYWWPCLPANLSREA 182 (341)
Q Consensus 111 ~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p--------~~v~~~il~~~~~~~~~~~~~~~~~~~~ 182 (341)
...+++..+.+.+.++..+. =..|+|+|.||.+|..++.... ..++-+|++++.... .
T Consensus 83 ~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~-------~----- 148 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP-------D----- 148 (212)
T ss_dssp G---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E-------E-----
T ss_pred ccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC-------c-----
Confidence 01344455556666666553 3579999999999988875421 246778888876320 0
Q ss_pred hhcCcchhhhhHHHhhhchhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHh
Q 038973 183 LQRLPVENQRTFRIAYYFPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLK 262 (341)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (341)
+ . .
T Consensus 149 -------------------------------~---------~-------------~------------------------ 151 (212)
T PF03959_consen 149 -------------------------------P---------D-------------Y------------------------ 151 (212)
T ss_dssp -------------------------------E-----------------------G------------------------
T ss_pred -------------------------------h---------h-------------h------------------------
Confidence 0 0 0
Q ss_pred hcccccccCCCCCCCCCCCCCccEEEEEeecCCCCChHHHHHHHhhCCC-cEEEEecCCCcccccCHHH
Q 038973 263 TGYAKWEFDPTDLINPFPDNEGSVHIWQGCEDRIIPSQINQFISEKLPW-IQYHEVPDAGHLFIFERKF 330 (341)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~gH~~~~ep~~ 330 (341)
. .+. .-..|++|+|.|+|++|.+++++.++.+++.+.+ .+++..+ +||.+....+.
T Consensus 152 --------~--~~~-~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~~ 208 (212)
T PF03959_consen 152 --------Q--ELY-DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHD-GGHHVPRKKED 208 (212)
T ss_dssp --------T--TTT---TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEES-SSSS----HHH
T ss_pred --------h--hhh-ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEEC-CCCcCcCChhh
Confidence 0 000 1344677899999999999999999999999977 7888887 58888765333
No 122
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.25 E-value=3.8e-09 Score=85.70 Aligned_cols=126 Identities=15% Similarity=0.132 Sum_probs=88.8
Q ss_pred CCceEccCCcEEEEEEccCCC--C-CCCceEEEEcCCCC-----CCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCC
Q 038973 40 SPRIKLSDGRHVAYREAGVPK--E-EANHKIIIIHGFGS-----SKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPL 111 (341)
Q Consensus 40 ~~~~~~~~g~~l~~~~~g~~~--~-~~~~~vl~~hG~~~-----~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~ 111 (341)
...+.......+..+.+-+.. . +..|.||++||+|. ....|+.+..+++.+.+..|+++|+|=.-+..-|.
T Consensus 63 ~~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa- 141 (336)
T KOG1515|consen 63 SKDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPA- 141 (336)
T ss_pred eeeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCc-
Confidence 344555455556666664432 2 45689999999874 25678889999988889999999999554433222
Q ss_pred CCccchHHHHHHHHHH------hCCCCcEEEEEeccChHHHHHHHhhc------cccccceeeeccccc
Q 038973 112 RTVKTEACDVEQLADK------LQIGSKFYVIGISMGAYPVYGCLKYI------PQRLAGASLVVPFVH 168 (341)
Q Consensus 112 ~~~~~~~~dl~~~l~~------l~~~~~~~lvGhS~Gg~~a~~~a~~~------p~~v~~~il~~~~~~ 168 (341)
.++|-.+.+.-+.++ .+. ++++|+|-|.||.+|..+|.+. +.++++.|++.|...
T Consensus 142 -~y~D~~~Al~w~~~~~~~~~~~D~-~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 142 -AYDDGWAALKWVLKNSWLKLGADP-SRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred -cchHHHHHHHHHHHhHHHHhCCCc-ccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 455555555555543 244 7899999999999999888652 357999999999864
No 123
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.24 E-value=9.5e-11 Score=84.99 Aligned_cols=191 Identities=16% Similarity=0.090 Sum_probs=115.8
Q ss_pred CcEEEEEEccCCCCCCCceEEEEcCCC---CCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHH----H
Q 038973 48 GRHVAYREAGVPKEEANHKIIIIHGFG---SSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEAC----D 120 (341)
Q Consensus 48 g~~l~~~~~g~~~~~~~~~vl~~hG~~---~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~----d 120 (341)
|..-....||+. ...+..||+||.- ++.......+..+.+ .||+|..+++ +.+.. ..++++... -
T Consensus 53 ~g~q~VDIwg~~--~~~klfIfIHGGYW~~g~rk~clsiv~~a~~-~gY~vasvgY---~l~~q--~htL~qt~~~~~~g 124 (270)
T KOG4627|consen 53 GGRQLVDIWGST--NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVR-RGYRVASVGY---NLCPQ--VHTLEQTMTQFTHG 124 (270)
T ss_pred CCceEEEEecCC--CCccEEEEEecchhhcCchhcccchhhhhhh-cCeEEEEecc---CcCcc--cccHHHHHHHHHHH
Confidence 335667788864 3568999999963 333333444444444 4999988855 43322 224444443 3
Q ss_pred HHHHHHHhCCCCcEEEEEeccChHHHHHHHhh-ccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhh
Q 038973 121 VEQLADKLQIGSKFYVIGISMGAYPVYGCLKY-IPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYY 199 (341)
Q Consensus 121 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~-~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (341)
+.-+++.....+.+.+-|||.|+.++.....+ +..+|.++++.++....
T Consensus 125 v~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l------------------------------ 174 (270)
T KOG4627|consen 125 VNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDL------------------------------ 174 (270)
T ss_pred HHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhH------------------------------
Confidence 44444444332567788999999999876654 44589999999987421
Q ss_pred chhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCC
Q 038973 200 FPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPF 279 (341)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (341)
+.+..... .....++....+.... ++ ..+
T Consensus 175 ----------~EL~~te~---g~dlgLt~~~ae~~Sc-------------------------------------dl-~~~ 203 (270)
T KOG4627|consen 175 ----------RELSNTES---GNDLGLTERNAESVSC-------------------------------------DL-WEY 203 (270)
T ss_pred ----------HHHhCCcc---ccccCcccchhhhcCc-------------------------------------cH-HHh
Confidence 00100000 0000011110000000 00 013
Q ss_pred CCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC
Q 038973 280 PDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE 327 (341)
Q Consensus 280 ~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 327 (341)
..+++|+|++.|++|.-.-.+..+.+++...++++..++|.+|+-.++
T Consensus 204 ~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~~~~f~n~~hy~I~~ 251 (270)
T KOG4627|consen 204 TDVTVWILVVAAEHESPKLIEQNRDFADQLRKASFTLFKNYDHYDIIE 251 (270)
T ss_pred cCceeeeeEeeecccCcHHHHhhhhHHHHhhhcceeecCCcchhhHHH
Confidence 455666999999999876678889999999999999999999987663
No 124
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.21 E-value=8.2e-11 Score=91.03 Aligned_cols=103 Identities=16% Similarity=0.112 Sum_probs=70.3
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHh-------cCceEEEEcCCCCCCCCCCCCCCccchHHH----HHHHHHHh---
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEE-------LKIYFLSFDRPGYGESDPHPLRTVKTEACD----VEQLADKL--- 128 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~-------~~~~vi~~D~~G~G~S~~~~~~~~~~~~~d----l~~~l~~l--- 128 (341)
++.+||||||..++...++.+...+.++ ..+++++.|+......- ....+.+.++. +..+++..
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~--~g~~l~~q~~~~~~~i~~i~~~~~~~ 80 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAF--HGRTLQRQAEFLAEAIKYILELYKSN 80 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccc--ccccHHHHHHHHHHHHHHHHHhhhhc
Confidence 4679999999999988888777666322 14778999887643221 12234444443 33444444
Q ss_pred -CCCCcEEEEEeccChHHHHHHHhhcc---ccccceeeecccc
Q 038973 129 -QIGSKFYVIGISMGAYPVYGCLKYIP---QRLAGASLVVPFV 167 (341)
Q Consensus 129 -~~~~~~~lvGhS~Gg~~a~~~a~~~p---~~v~~~il~~~~~ 167 (341)
...+++++|||||||.++-.++...+ +.|+.+|.++++-
T Consensus 81 ~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 81 RPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred cCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 22379999999999999988776533 4799999999864
No 125
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.21 E-value=4.1e-10 Score=83.16 Aligned_cols=162 Identities=16% Similarity=0.068 Sum_probs=107.5
Q ss_pred EEccCCCCCCCceEEEEcCCCCCC-CcchhhHHHHHHhcCceEEEEcCCCC-CCCCC--CC-------CCCccchHHHHH
Q 038973 54 REAGVPKEEANHKIIIIHGFGSSK-DLNLPVSQELIEELKIYFLSFDRPGY-GESDP--HP-------LRTVKTEACDVE 122 (341)
Q Consensus 54 ~~~g~~~~~~~~~vl~~hG~~~~~-~~~~~~~~~l~~~~~~~vi~~D~~G~-G~S~~--~~-------~~~~~~~~~dl~ 122 (341)
+..|+.+ ++..||++--..+-. ..-+..+..++.. ||.|+.||+..- -.|.. .. ..+.+..-+++.
T Consensus 31 Yv~gs~~--~~~~li~i~DvfG~~~~n~r~~Adk~A~~-Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~ 107 (242)
T KOG3043|consen 31 YVVGSTS--SKKVLIVIQDVFGFQFPNTREGADKVALN-GYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDIT 107 (242)
T ss_pred EEecCCC--CCeEEEEEEeeeccccHHHHHHHHHHhcC-CcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHH
Confidence 3445543 335666666554443 3356677777776 999999996532 11111 00 124555556666
Q ss_pred HHHHHh---CCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccccCCCCCccchhhhhhcCcchhhhhHHHhhh
Q 038973 123 QLADKL---QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHYWWPCLPANLSREALQRLPVENQRTFRIAYY 199 (341)
Q Consensus 123 ~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (341)
.+++.+ +..+++.++|.+|||.++..+....| .+.+.+..-|...
T Consensus 108 ~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~------------------------------- 155 (242)
T KOG3043|consen 108 AVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFV------------------------------- 155 (242)
T ss_pred HHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEecCCcC-------------------------------
Confidence 666555 43479999999999999988888877 6777776665421
Q ss_pred chhhhHHhhhcccccccccccccCCCCCCchHHHHHHhhcCCCCchhHHhhhhhHHHHHHHHhhcccccccCCCCCCCCC
Q 038973 200 FPWLLNLWMSQKWFPTLSIMSGNMDIFSPPDLEILKKLSESPSEGQEKILQQGIHESLYRDLKTGYAKWEFDPTDLINPF 279 (341)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (341)
+ ....
T Consensus 156 --------------------------------------------------------------------------d-~~D~ 160 (242)
T KOG3043|consen 156 --------------------------------------------------------------------------D-SADI 160 (242)
T ss_pred --------------------------------------------------------------------------C-hhHH
Confidence 0 0003
Q ss_pred CCCCccEEEEEeecCCCCChHHHHHHHhhCC---C--cEEEEecCCCcccc
Q 038973 280 PDNEGSVHIWQGCEDRIIPSQINQFISEKLP---W--IQYHEVPDAGHLFI 325 (341)
Q Consensus 280 ~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~---~--~~~~~~~~~gH~~~ 325 (341)
.++++|++++.|+.|..+|++....+.+.+. . .++.+++|.+|..+
T Consensus 161 ~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~ 211 (242)
T KOG3043|consen 161 ANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFV 211 (242)
T ss_pred hcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhh
Confidence 3445669999999999999998877777663 2 47999999999766
No 126
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.20 E-value=2.3e-09 Score=83.54 Aligned_cols=100 Identities=17% Similarity=0.267 Sum_probs=84.5
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChH
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAY 144 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ 144 (341)
|+|.++|+.++...+|.++...+... ..|+..+.||.|.- .....+++++++...+.|.......+++|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~--~~v~~l~a~g~~~~-~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL--LPVYGLQAPGYGAG-EQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC--ceeeccccCccccc-ccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccH
Confidence 57999999999999999999998775 56999999999862 2233589999999888888887767999999999999
Q ss_pred HHHHHHhhc---cccccceeeecccc
Q 038973 145 PVYGCLKYI---PQRLAGASLVVPFV 167 (341)
Q Consensus 145 ~a~~~a~~~---p~~v~~~il~~~~~ 167 (341)
+|..+|.+- .+.|..++++++..
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~ 103 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVP 103 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCC
Confidence 999998752 34799999999874
No 127
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.19 E-value=1.7e-10 Score=96.21 Aligned_cols=101 Identities=17% Similarity=0.255 Sum_probs=60.1
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCC-CCCC-C---------C-------C-------CC-----
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGY-GESD-P---------H-------P-------LR----- 112 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~-G~S~-~---------~-------~-------~~----- 112 (341)
.-|+|||-||++++...|..++.+|+.+ ||-|+++|+|.. +-.. . . . ..
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~-GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASH-GYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHT-T-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhC-CeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 3589999999999999999999999987 999999999943 2100 0 0 0 00
Q ss_pred ------CccchHHHHHHHHHHh--------------------------CCCCcEEEEEeccChHHHHHHHhhccccccce
Q 038973 113 ------TVKTEACDVEQLADKL--------------------------QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGA 160 (341)
Q Consensus 113 ------~~~~~~~dl~~~l~~l--------------------------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~ 160 (341)
.++.-++++..+++.+ +. +++.++|||+||..++..+... .++++.
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~-~~i~~~GHSFGGATa~~~l~~d-~r~~~~ 255 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDL-SRIGLAGHSFGGATALQALRQD-TRFKAG 255 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEE-EEEEEEEETHHHHHHHHHHHH--TT--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcch-hheeeeecCchHHHHHHHHhhc-cCcceE
Confidence 0011123344444332 12 4799999999999999887775 689999
Q ss_pred eeeccc
Q 038973 161 SLVVPF 166 (341)
Q Consensus 161 il~~~~ 166 (341)
|++++.
T Consensus 256 I~LD~W 261 (379)
T PF03403_consen 256 ILLDPW 261 (379)
T ss_dssp EEES--
T ss_pred EEeCCc
Confidence 999985
No 128
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.19 E-value=2.8e-09 Score=78.88 Aligned_cols=59 Identities=20% Similarity=0.245 Sum_probs=45.9
Q ss_pred CCCCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC---HHHHHHHHHHHh
Q 038973 280 PDNEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE---RKFCEAIIRALL 339 (341)
Q Consensus 280 ~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e---p~~~~~~i~~fl 339 (341)
+.+++|.|.|.|+.|.++|...+..|++.++++.+..-+ +||++... -+.+.+.|..++
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~Hp-ggH~VP~~~~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHP-GGHIVPNKAKYKEKIADFIQSFL 221 (230)
T ss_pred cCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEecC-CCccCCCchHHHHHHHHHHHHHH
Confidence 346677999999999999999999999999999766666 69998874 344444444443
No 129
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.18 E-value=1.8e-10 Score=88.52 Aligned_cols=116 Identities=22% Similarity=0.303 Sum_probs=73.8
Q ss_pred cCCcEEEEEEccCCC---CCCC-ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCC-------------CCCC
Q 038973 46 SDGRHVAYREAGVPK---EEAN-HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYG-------------ESDP 108 (341)
Q Consensus 46 ~~g~~l~~~~~g~~~---~~~~-~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G-------------~S~~ 108 (341)
+.|.++.|+.+-|.. ++.- |.+||+||.+..+..-.. .+....| -++++.+-.+ .++.
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~---~l~sg~g--aiawa~pedqcfVlAPQy~~if~d~e~ 243 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDK---VLSSGIG--AIAWAGPEDQCFVLAPQYNPIFADSEE 243 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhh---hhhcCcc--ceeeecccCceEEEccccccccccccc
Confidence 458889999886521 1222 889999999987665432 2333223 4444443333 1222
Q ss_pred CCCCCccchHHHHH-HHHHHhCCC-CcEEEEEeccChHHHHHHHhhccccccceeeeccc
Q 038973 109 HPLRTVKTEACDVE-QLADKLQIG-SKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPF 166 (341)
Q Consensus 109 ~~~~~~~~~~~dl~-~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~ 166 (341)
....-+....+-+. .+.++.+++ ++++++|.|+||+-++.++.++|+.+.+.+++++.
T Consensus 244 ~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~ 303 (387)
T COG4099 244 KTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGG 303 (387)
T ss_pred ccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCC
Confidence 11112333344444 233444542 68999999999999999999999999999999985
No 130
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.15 E-value=7.7e-11 Score=90.69 Aligned_cols=51 Identities=18% Similarity=0.158 Sum_probs=38.0
Q ss_pred hHHHHHHHHHHh-CC-CCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 117 EACDVEQLADKL-QI-GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 117 ~~~dl~~~l~~l-~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
+.++..+++... .. ++++.|+|.|.||-+|+.+|..+| .|+++|.++|...
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 344445555544 22 269999999999999999999999 7999999998753
No 131
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.14 E-value=1.4e-08 Score=76.30 Aligned_cols=106 Identities=20% Similarity=0.232 Sum_probs=81.8
Q ss_pred CCCceEEEEcCCCCCCCcchhhHHHHHHhcC--ceEEEEcCCCCCCCC---C-------CCCCCccchHHHHHHHHHHh-
Q 038973 62 EANHKIIIIHGFGSSKDLNLPVSQELIEELK--IYFLSFDRPGYGESD---P-------HPLRTVKTEACDVEQLADKL- 128 (341)
Q Consensus 62 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~--~~vi~~D~~G~G~S~---~-------~~~~~~~~~~~dl~~~l~~l- 128 (341)
..++.+++++|.+|....|..+...|....+ ..++.+...||-.-. . .+.++++++++.=.++++..
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~ 106 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYV 106 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhC
Confidence 4578899999999999999999999887654 458888888876533 1 12358889998888888765
Q ss_pred CCCCcEEEEEeccChHHHHHHHhhc--cccccceeeecccc
Q 038973 129 QIGSKFYVIGISMGAYPVYGCLKYI--PQRLAGASLVVPFV 167 (341)
Q Consensus 129 ~~~~~~~lvGhS~Gg~~a~~~a~~~--p~~v~~~il~~~~~ 167 (341)
..+.+++++|||-|+.+.+.++... --.|.+++++-|..
T Consensus 107 Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTI 147 (301)
T KOG3975|consen 107 PKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTI 147 (301)
T ss_pred CCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchH
Confidence 3357999999999999999988632 23688888887754
No 132
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.12 E-value=7.7e-09 Score=87.85 Aligned_cols=127 Identities=14% Similarity=0.059 Sum_probs=89.1
Q ss_pred CCCceEccCCcEEEEEEccCCC---CCCCceEEEEcCCCCCC-----Ccchhh--HHHHHHhcCceEEEEcCCCCCCCCC
Q 038973 39 TSPRIKLSDGRHVAYREAGVPK---EEANHKIIIIHGFGSSK-----DLNLPV--SQELIEELKIYFLSFDRPGYGESDP 108 (341)
Q Consensus 39 ~~~~~~~~~g~~l~~~~~g~~~---~~~~~~vl~~hG~~~~~-----~~~~~~--~~~l~~~~~~~vi~~D~~G~G~S~~ 108 (341)
+...+....|.+++...+.+.+ +++-|+++++-|.++-. ..|-.. ...|+. .||-|+.+|-||......
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~Las-lGy~Vv~IDnRGS~hRGl 692 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLAS-LGYVVVFIDNRGSAHRGL 692 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhh-cceEEEEEcCCCccccch
Confidence 3344566567666655554322 23458999999998642 222211 234554 499999999999765542
Q ss_pred CC---------CCCccchHHHHHHHHHHhC---CCCcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 109 HP---------LRTVKTEACDVEQLADKLQ---IGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 109 ~~---------~~~~~~~~~dl~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
.- ...++|+++-+.-+.++.| . +++.+-|||+||.+++....++|+-++..|.-+|..
T Consensus 693 kFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidm-drV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT 762 (867)
T KOG2281|consen 693 KFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDM-DRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVT 762 (867)
T ss_pred hhHHHHhhccCeeeehhhHHHHHHHHHhcCcccc-hheeEeccccccHHHHHHhhcCcceeeEEeccCcce
Confidence 11 1268899998888888874 4 799999999999999999999999887777666654
No 133
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=99.10 E-value=4.4e-09 Score=87.58 Aligned_cols=77 Identities=14% Similarity=0.152 Sum_probs=60.5
Q ss_pred CceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHh---CCC-CcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 92 KIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKL---QIG-SKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 92 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l---~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
|+-|+.+.+. .++.++.++.+.......+++.. ..+ .+.+|+|.|.||+.++.+|+.+|+.+.-+|+.+++.
T Consensus 100 GHPvYFV~F~----p~P~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPl 175 (581)
T PF11339_consen 100 GHPVYFVGFF----PEPEPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPL 175 (581)
T ss_pred CCCeEEEEec----CCCCCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCc
Confidence 7767777654 23444568888888777777665 221 389999999999999999999999999999999988
Q ss_pred cccCC
Q 038973 168 HYWWP 172 (341)
Q Consensus 168 ~~~~~ 172 (341)
++|..
T Consensus 176 sywaG 180 (581)
T PF11339_consen 176 SYWAG 180 (581)
T ss_pred ccccC
Confidence 88763
No 134
>PRK04940 hypothetical protein; Provisional
Probab=99.10 E-value=1.2e-08 Score=74.40 Aligned_cols=86 Identities=20% Similarity=0.207 Sum_probs=52.5
Q ss_pred EEEEcCCCCCCCc--chhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCC---CCcEEEEEecc
Q 038973 67 IIIIHGFGSSKDL--NLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQI---GSKFYVIGISM 141 (341)
Q Consensus 67 vl~~hG~~~~~~~--~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~---~~~~~lvGhS~ 141 (341)
||++||+.++..+ ... ..+ . .+.+|.+-+-.+ .....+..+.+.+.+..+.. .+++.|||+|+
T Consensus 2 IlYlHGF~SS~~S~~~Ka--~~l----~--~~~p~~~~~~l~----~~~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSL 69 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKV--LQL----Q--FIDPDVRLISYS----TLHPKHDMQHLLKEVDKMLQLSDDERPLICGVGL 69 (180)
T ss_pred EEEeCCCCCCCCccHHHH--Hhh----e--eeCCCCeEEECC----CCCHHHHHHHHHHHHHHhhhccCCCCcEEEEeCh
Confidence 7899999999877 431 111 1 112222222111 12333344445555543211 15799999999
Q ss_pred ChHHHHHHHhhccccccceeeecccc
Q 038973 142 GAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 142 Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
||+.|.+++.++. + ..|++||.+
T Consensus 70 GGyyA~~La~~~g--~-~aVLiNPAv 92 (180)
T PRK04940 70 GGYWAERIGFLCG--I-RQVIFNPNL 92 (180)
T ss_pred HHHHHHHHHHHHC--C-CEEEECCCC
Confidence 9999999999975 3 678899975
No 135
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.10 E-value=1.1e-09 Score=82.94 Aligned_cols=103 Identities=11% Similarity=0.101 Sum_probs=73.4
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCC-CCccchHHHHHHHHHHh-------CCCCcE
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPL-RTVKTEACDVEQLADKL-------QIGSKF 134 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~dl~~~l~~l-------~~~~~~ 134 (341)
.=|.|+|+||+.-....|..+..+++.+ ||.|+++++-..-.-+...+ .+....++++..-+.++ ++ .++
T Consensus 45 ~yPVilF~HG~~l~ns~Ys~lL~HIASH-GfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl-~kl 122 (307)
T PF07224_consen 45 TYPVILFLHGFNLYNSFYSQLLAHIASH-GFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPENVEANL-SKL 122 (307)
T ss_pred CccEEEEeechhhhhHHHHHHHHHHhhc-CeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCCccccc-ceE
Confidence 3478999999999999999999999886 99999999874311111000 12333334444444333 23 689
Q ss_pred EEEEeccChHHHHHHHhhcc--ccccceeeecccc
Q 038973 135 YVIGISMGAYPVYGCLKYIP--QRLAGASLVVPFV 167 (341)
Q Consensus 135 ~lvGhS~Gg~~a~~~a~~~p--~~v~~~il~~~~~ 167 (341)
.++|||.||-.|..+|..+. -++.++|-++|..
T Consensus 123 al~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 123 ALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred EEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 99999999999999988763 3588999999864
No 136
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.09 E-value=5.6e-10 Score=89.54 Aligned_cols=90 Identities=20% Similarity=0.168 Sum_probs=65.5
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCC--CCCCCCC----CC---CccchHHHHHHHHHHh-----
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGY--GESDPHP----LR---TVKTEACDVEQLADKL----- 128 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~--G~S~~~~----~~---~~~~~~~dl~~~l~~l----- 128 (341)
..|.||+-||.++....+..+.+.+++. ||.|.++|++|. |...... .+ -+.+...|+..+++.|
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~-Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~ 148 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASY-GFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTA 148 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhC-ceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhc
Confidence 4588899999999999999999999876 999999999984 3332111 11 1234445555555433
Q ss_pred --------CCCCcEEEEEeccChHHHHHHHhhcc
Q 038973 129 --------QIGSKFYVIGISMGAYPVYGCLKYIP 154 (341)
Q Consensus 129 --------~~~~~~~lvGhS~Gg~~a~~~a~~~p 154 (341)
+. .+|.++|||+||..++..+.-+.
T Consensus 149 sP~l~~~ld~-~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 149 SPALAGRLDP-QRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred CcccccccCc-cceEEEecccccHHHHHhccccc
Confidence 23 68999999999999999886543
No 137
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.09 E-value=1.5e-09 Score=79.15 Aligned_cols=97 Identities=23% Similarity=0.301 Sum_probs=72.7
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHh----CCCCcEEEEEec
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKL----QIGSKFYVIGIS 140 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l----~~~~~~~lvGhS 140 (341)
..+||+-|=++-...=..++..|.++ |+.|+.+|-+-+=-+ ..+.++.+.|+..++++. +. ++++|+|+|
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~-G~~VvGvdsl~Yfw~----~rtP~~~a~Dl~~~i~~y~~~w~~-~~vvLiGYS 76 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQ-GVPVVGVDSLRYFWS----ERTPEQTAADLARIIRHYRARWGR-KRVVLIGYS 76 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHC-CCeEEEechHHHHhh----hCCHHHHHHHHHHHHHHHHHHhCC-ceEEEEeec
Confidence 35778888777654445677778776 999999997654433 246778888888888765 55 799999999
Q ss_pred cChHHHHHHHhhcc----ccccceeeecccc
Q 038973 141 MGAYPVYGCLKYIP----QRLAGASLVVPFV 167 (341)
Q Consensus 141 ~Gg~~a~~~a~~~p----~~v~~~il~~~~~ 167 (341)
+|+-+.-....+-| ++|+.++++++..
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 99977766655545 4799999999863
No 138
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.04 E-value=3.4e-09 Score=77.84 Aligned_cols=102 Identities=21% Similarity=0.238 Sum_probs=70.4
Q ss_pred CceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCC-------------------CCCCCCccchHHHHHHH
Q 038973 64 NHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESD-------------------PHPLRTVKTEACDVEQL 124 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~-------------------~~~~~~~~~~~~dl~~~ 124 (341)
..+||++||.+.+...|..++..+.-+ +...|+|.-|-.-.+. .....++...++.+..+
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~-NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLP-NIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCC-CeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 358999999999999998877775444 5667777544321111 11112344455556666
Q ss_pred HHHh---CC-CCcEEEEEeccChHHHHHHHhhccccccceeeeccc
Q 038973 125 ADKL---QI-GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPF 166 (341)
Q Consensus 125 l~~l---~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~ 166 (341)
+++. ++ ..++.+-|.|+||.+++..+..+|..+.+.+...+.
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 6654 32 157899999999999999999998888887777764
No 139
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.96 E-value=1.6e-07 Score=71.00 Aligned_cols=102 Identities=19% Similarity=0.187 Sum_probs=76.1
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcC----ceEEEEcCCCC----CCCCCCC------------CCCccchHHHHHHH
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELK----IYFLSFDRPGY----GESDPHP------------LRTVKTEACDVEQL 124 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~----~~vi~~D~~G~----G~S~~~~------------~~~~~~~~~dl~~~ 124 (341)
-|.||+||.+++..+...++.++..+++ --++.+|--|. |.-++.. ..+..++..++..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 5789999999999999999999988642 12566666662 1111111 12666778888888
Q ss_pred HHHh----CCCCcEEEEEeccChHHHHHHHhhccc-----cccceeeecccc
Q 038973 125 ADKL----QIGSKFYVIGISMGAYPVYGCLKYIPQ-----RLAGASLVVPFV 167 (341)
Q Consensus 125 l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~~il~~~~~ 167 (341)
+..| ++ +++.+|||||||.-...|+..+.. .++++|.+++..
T Consensus 126 msyL~~~Y~i-~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpf 176 (288)
T COG4814 126 MSYLQKHYNI-PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPF 176 (288)
T ss_pred HHHHHHhcCC-ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccc
Confidence 7766 56 799999999999999999887532 589999999864
No 140
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.92 E-value=4e-08 Score=76.28 Aligned_cols=95 Identities=14% Similarity=0.126 Sum_probs=68.9
Q ss_pred EEcCCC--CCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHH
Q 038973 69 IIHGFG--SSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPV 146 (341)
Q Consensus 69 ~~hG~~--~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a 146 (341)
++|+.+ ++...|..+...+.. ++.|+++|.+|++.+... ..+.+++++.+...+.......+++++|||+||.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~--~~~v~~~~~~g~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRG--RRDVSALPLPGFGPGEPL-PASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCC--CccEEEecCCCCCCCCCC-CCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHH
Confidence 445543 566778888888866 467999999999876543 246666666655554443323689999999999999
Q ss_pred HHHHhh---ccccccceeeeccc
Q 038973 147 YGCLKY---IPQRLAGASLVVPF 166 (341)
Q Consensus 147 ~~~a~~---~p~~v~~~il~~~~ 166 (341)
..++.. .++.+.+++++++.
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~ 101 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTY 101 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccC
Confidence 888875 34578899888875
No 141
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.92 E-value=2.6e-09 Score=90.34 Aligned_cols=89 Identities=12% Similarity=0.008 Sum_probs=67.2
Q ss_pred CCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHH----HHHHHHHhCCCCcEEEEEeccChHHHHHHH
Q 038973 75 SSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACD----VEQLADKLQIGSKFYVIGISMGAYPVYGCL 150 (341)
Q Consensus 75 ~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~d----l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a 150 (341)
.....|..+++.|.+. ||.+ ..|++|+|.+.+.. ...++..++ ++++.+..+. ++++|+||||||.+++.++
T Consensus 105 ~~~~~~~~li~~L~~~-GY~~-~~dL~g~gYDwR~~-~~~~~~~~~Lk~lIe~~~~~~g~-~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 105 DEVYYFHDMIEQLIKW-GYKE-GKTLFGFGYDFRQS-NRLPETMDGLKKKLETVYKASGG-KKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred chHHHHHHHHHHHHHc-CCcc-CCCcccCCCCcccc-ccHHHHHHHHHHHHHHHHHHcCC-CCEEEEEECHhHHHHHHHH
Confidence 4568899999999875 7644 89999999886543 223334444 4444455565 7999999999999999999
Q ss_pred hhccc----cccceeeecccc
Q 038973 151 KYIPQ----RLAGASLVVPFV 167 (341)
Q Consensus 151 ~~~p~----~v~~~il~~~~~ 167 (341)
..+|+ .|+++|.++++.
T Consensus 181 ~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 181 SLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HHCCHhHHhHhccEEEECCCC
Confidence 88886 378899998764
No 142
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.90 E-value=3.7e-09 Score=80.60 Aligned_cols=96 Identities=13% Similarity=0.050 Sum_probs=55.3
Q ss_pred ceEEEEcCCCC-CCCcchhhHHHHHHhcCce---EEEEcCCCCCCCCCCC--C---CCccchHHHHHHHHHHhCCCCcEE
Q 038973 65 HKIIIIHGFGS-SKDLNLPVSQELIEELKIY---FLSFDRPGYGESDPHP--L---RTVKTEACDVEQLADKLQIGSKFY 135 (341)
Q Consensus 65 ~~vl~~hG~~~-~~~~~~~~~~~l~~~~~~~---vi~~D~~G~G~S~~~~--~---~~~~~~~~dl~~~l~~l~~~~~~~ 135 (341)
.||||+||.++ ....|..+.+.|.++ ||. |+++++-....+.... . .+..++++-|..+++..+. +|.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~-GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa--kVD 78 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAA-GYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA--KVD 78 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHT-T--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT----EE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHc-CCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC--EEE
Confidence 48999999998 678999999999887 998 8999985443322111 0 1123344444455555564 999
Q ss_pred EEEeccChHHHHHHHhhccccccceeeec
Q 038973 136 VIGISMGAYPVYGCLKYIPQRLAGASLVV 164 (341)
Q Consensus 136 lvGhS~Gg~~a~~~a~~~p~~v~~~il~~ 164 (341)
||||||||.++-.+.... .-++...-+.
T Consensus 79 IVgHS~G~~iaR~yi~~~-~~~d~~~~lg 106 (219)
T PF01674_consen 79 IVGHSMGGTIARYYIKGG-GGADKVVNLG 106 (219)
T ss_dssp EEEETCHHHHHHHHHHHC-TGGGTEEE--
T ss_pred EEEcCCcCHHHHHHHHHc-CCCCcccCcc
Confidence 999999999998776543 3334443333
No 143
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.88 E-value=1.6e-09 Score=88.48 Aligned_cols=104 Identities=16% Similarity=0.190 Sum_probs=65.6
Q ss_pred CCCceEEEEcCCCCCC--Ccch-hhHHHHHHh--cCceEEEEcCCCCCCCCCCCCC-----CccchHHHHHHHHHHh---
Q 038973 62 EANHKIIIIHGFGSSK--DLNL-PVSQELIEE--LKIYFLSFDRPGYGESDPHPLR-----TVKTEACDVEQLADKL--- 128 (341)
Q Consensus 62 ~~~~~vl~~hG~~~~~--~~~~-~~~~~l~~~--~~~~vi~~D~~G~G~S~~~~~~-----~~~~~~~dl~~~l~~l--- 128 (341)
.++|++|++|||.++. ..|. .+...+.++ .++.||++|+...-.. .| .....++.|..++..|
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~----~Y~~a~~n~~~vg~~la~~l~~L~~~ 144 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN----NYPQAVANTRLVGRQLAKFLSFLINN 144 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc----cccchhhhHHHHHHHHHHHHHHHHhh
Confidence 4679999999999877 4555 445555554 4789999999633211 12 2333444444444443
Q ss_pred -CC-CCcEEEEEeccChHHHHHHHhhccc--cccceeeecccccc
Q 038973 129 -QI-GSKFYVIGISMGAYPVYGCLKYIPQ--RLAGASLVVPFVHY 169 (341)
Q Consensus 129 -~~-~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~~il~~~~~~~ 169 (341)
+. -+++++||||+||.+|-.++..... +|..++.++|+.+.
T Consensus 145 ~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 145 FGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp H---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred cCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 32 1799999999999999988877766 89999999998764
No 144
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.85 E-value=1.6e-08 Score=78.90 Aligned_cols=104 Identities=17% Similarity=0.281 Sum_probs=71.0
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHhcCc--eEEEEcCCCCCCCCCC--CCCCccchHHHHHHHHHHh----CCCCcE
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEELKI--YFLSFDRPGYGESDPH--PLRTVKTEACDVEQLADKL----QIGSKF 134 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~--~vi~~D~~G~G~S~~~--~~~~~~~~~~dl~~~l~~l----~~~~~~ 134 (341)
.+..+||+||+..+.+.-..-..++....++ .++.+.||+.|.-..- ...+...-..++..+++.+ +. +++
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~-~~I 95 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGI-KRI 95 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCC-ceE
Confidence 4679999999998865544444555555544 6999999988763211 1113333445555666554 44 799
Q ss_pred EEEEeccChHHHHHHHhh----cc-----ccccceeeecccc
Q 038973 135 YVIGISMGAYPVYGCLKY----IP-----QRLAGASLVVPFV 167 (341)
Q Consensus 135 ~lvGhS~Gg~~a~~~a~~----~p-----~~v~~~il~~~~~ 167 (341)
++++||||+.+.+..... .+ .++..+++++|-.
T Consensus 96 ~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 96 HILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 999999999999887543 11 3688999999864
No 145
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.84 E-value=2e-08 Score=81.41 Aligned_cols=123 Identities=18% Similarity=0.176 Sum_probs=67.0
Q ss_pred eEccCCcEEEEEEccCCC-CCCCceEEEEcCCCCCCCc--------------ch----hhHHHHHHhcCceEEEEcCCCC
Q 038973 43 IKLSDGRHVAYREAGVPK-EEANHKIIIIHGFGSSKDL--------------NL----PVSQELIEELKIYFLSFDRPGY 103 (341)
Q Consensus 43 ~~~~~g~~l~~~~~g~~~-~~~~~~vl~~hG~~~~~~~--------------~~----~~~~~l~~~~~~~vi~~D~~G~ 103 (341)
|.+.++..+.....-|.. +.+-|.||++||-++..+. +. .+..+|+++ ||-|+++|.+|+
T Consensus 93 f~~~p~~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~-GYVvla~D~~g~ 171 (390)
T PF12715_consen 93 FNTTPGSRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKR-GYVVLAPDALGF 171 (390)
T ss_dssp E--STTB-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTT-TSEEEEE--TTS
T ss_pred EEccCCeeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhC-CCEEEEEccccc
Confidence 444455555544443332 3455899999998765311 11 346677776 999999999999
Q ss_pred CCCCCCCC------CCccchH---------------HHHHHHHHHhCC-----CCcEEEEEeccChHHHHHHHhhccccc
Q 038973 104 GESDPHPL------RTVKTEA---------------CDVEQLADKLQI-----GSKFYVIGISMGAYPVYGCLKYIPQRL 157 (341)
Q Consensus 104 G~S~~~~~------~~~~~~~---------------~dl~~~l~~l~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~~v 157 (341)
|+...... ++.+.++ -|....++.+.- .++|.++|+||||..++.+++.. ++|
T Consensus 172 GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRI 250 (390)
T PF12715_consen 172 GERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRI 250 (390)
T ss_dssp GGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT-
T ss_pred cccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhh
Confidence 98764321 1112221 122334444421 26899999999999999999985 589
Q ss_pred cceeeecccc
Q 038973 158 AGASLVVPFV 167 (341)
Q Consensus 158 ~~~il~~~~~ 167 (341)
++.|..+..+
T Consensus 251 ka~v~~~~l~ 260 (390)
T PF12715_consen 251 KATVANGYLC 260 (390)
T ss_dssp -EEEEES-B-
T ss_pred HhHhhhhhhh
Confidence 8888777653
No 146
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.83 E-value=6.2e-08 Score=76.91 Aligned_cols=105 Identities=23% Similarity=0.264 Sum_probs=77.5
Q ss_pred CCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcc------hhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHH
Q 038973 47 DGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLN------LPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACD 120 (341)
Q Consensus 47 ~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~------~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~d 120 (341)
|+..+--.....+..++...+|++-|.++.-+.. +.....+++..+-+|+.+++||.|.|.... +.+++++|
T Consensus 120 D~~~IDt~~I~~~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~--s~~dLv~~ 197 (365)
T PF05677_consen 120 DGVKIDTMAIHQPEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPP--SRKDLVKD 197 (365)
T ss_pred CCEEEEEEEeeCCCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCC--CHHHHHHH
Confidence 6666655444444445678999999988765551 234566777778889999999999998766 46888888
Q ss_pred HHHHHHHhC-----C-CCcEEEEEeccChHHHHHHHhhc
Q 038973 121 VEQLADKLQ-----I-GSKFYVIGISMGAYPVYGCLKYI 153 (341)
Q Consensus 121 l~~~l~~l~-----~-~~~~~lvGhS~Gg~~a~~~a~~~ 153 (341)
-.+.++.|. + .+.+++.|||+||.++...+.++
T Consensus 198 ~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 198 YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred HHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 777777662 2 16899999999999988766554
No 147
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.82 E-value=2.9e-07 Score=74.48 Aligned_cols=45 Identities=27% Similarity=0.406 Sum_probs=36.5
Q ss_pred CCccEEEEEeecCCCCChHHHHHHHhhC-----CCcEEEEecCCCccccc
Q 038973 282 NEGSVHIWQGCEDRIIPSQINQFISEKL-----PWIQYHEVPDAGHLFIF 326 (341)
Q Consensus 282 i~~Pvlii~g~~D~~~p~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~ 326 (341)
.++|+++.+|..|.++|....+.+.+.+ .+++++.+++.+|....
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~~ 267 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGAA 267 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhhh
Confidence 4678999999999999998887776654 35678888999998654
No 148
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.80 E-value=6.5e-08 Score=75.08 Aligned_cols=127 Identities=20% Similarity=0.205 Sum_probs=87.5
Q ss_pred CCceEccCCcEEEEEEccCCC-CCCCceEEEEcCCCCCCCcchhhH--HHHHHhcCceEEEEcC-CC------CCCCCCC
Q 038973 40 SPRIKLSDGRHVAYREAGVPK-EEANHKIIIIHGFGSSKDLNLPVS--QELIEELKIYFLSFDR-PG------YGESDPH 109 (341)
Q Consensus 40 ~~~~~~~~g~~l~~~~~g~~~-~~~~~~vl~~hG~~~~~~~~~~~~--~~l~~~~~~~vi~~D~-~G------~G~S~~~ 109 (341)
...+.. +|.+..|+.+-|+. +.+.|.||.+||..++...++... +.++++.||-|+.+|- ++ .+.+..+
T Consensus 37 ~~s~~~-~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p 115 (312)
T COG3509 37 VASFDV-NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGP 115 (312)
T ss_pred cccccc-CCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCc
Confidence 334555 77788888875543 334578899999999987777554 7888888999999952 22 2222111
Q ss_pred CC-C----CccchHHHHHHHHHHhCCC-CcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 110 PL-R----TVKTEACDVEQLADKLQIG-SKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 110 ~~-~----~~~~~~~dl~~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
.+ . +...+.+.+..++.+.+++ .+|++.|.|-||.++..++..+|+.+.++..+++..
T Consensus 116 ~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 116 ADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 11 1 2222333344444555652 489999999999999999999999999999998865
No 149
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.80 E-value=8.9e-08 Score=82.60 Aligned_cols=130 Identities=17% Similarity=0.164 Sum_probs=82.7
Q ss_pred CCCceEcc--CCcEEEEEEccCCC-CCCCceEEEEcCCCCCCCcchhhHHH---HHH-h-------------cCceEEEE
Q 038973 39 TSPRIKLS--DGRHVAYREAGVPK-EEANHKIIIIHGFGSSKDLNLPVSQE---LIE-E-------------LKIYFLSF 98 (341)
Q Consensus 39 ~~~~~~~~--~g~~l~~~~~g~~~-~~~~~~vl~~hG~~~~~~~~~~~~~~---l~~-~-------------~~~~vi~~ 98 (341)
...++.+. .+..++|..+.... .++.|.||.+.|.++++..+..+.+. ... . ...+++-+
T Consensus 12 ~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~i 91 (415)
T PF00450_consen 12 YSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFI 91 (415)
T ss_dssp EEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE
T ss_pred EEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEE
Confidence 44556665 57789988875433 35679999999999998877422110 000 0 02569999
Q ss_pred c-CCCCCCCCCCCC----CCccchHHHHHHHHHHh-----C-CCCcEEEEEeccChHHHHHHHhh----c------cccc
Q 038973 99 D-RPGYGESDPHPL----RTVKTEACDVEQLADKL-----Q-IGSKFYVIGISMGAYPVYGCLKY----I------PQRL 157 (341)
Q Consensus 99 D-~~G~G~S~~~~~----~~~~~~~~dl~~~l~~l-----~-~~~~~~lvGhS~Gg~~a~~~a~~----~------p~~v 157 (341)
| ..|.|.|..... .+.++.++|+..+|..+ . .+.+++|.|.|+||..+-.+|.. . +-.+
T Consensus 92 D~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inL 171 (415)
T PF00450_consen 92 DQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINL 171 (415)
T ss_dssp --STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEE
T ss_pred eecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccc
Confidence 9 459999964332 26788888888888765 1 12599999999999876655532 2 3458
Q ss_pred cceeeeccccc
Q 038973 158 AGASLVVPFVH 168 (341)
Q Consensus 158 ~~~il~~~~~~ 168 (341)
+++++.++.+.
T Consensus 172 kGi~IGng~~d 182 (415)
T PF00450_consen 172 KGIAIGNGWID 182 (415)
T ss_dssp EEEEEESE-SB
T ss_pred ccceecCcccc
Confidence 89999999865
No 150
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.78 E-value=2.3e-07 Score=79.51 Aligned_cols=129 Identities=12% Similarity=0.062 Sum_probs=90.5
Q ss_pred CCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCC---cch--hhHH---HHHHhcCceEEEEcCCCCCCCCCCC
Q 038973 39 TSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKD---LNL--PVSQ---ELIEELKIYFLSFDRPGYGESDPHP 110 (341)
Q Consensus 39 ~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~---~~~--~~~~---~l~~~~~~~vi~~D~~G~G~S~~~~ 110 (341)
....+++.||.+|+...+-+....+.|+++..+-++-... .+. ...+ .++.+ ||.|+..|.||.|.|+..-
T Consensus 20 ~~v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~-GYavV~qDvRG~~~SeG~~ 98 (563)
T COG2936 20 RDVMVPMRDGVRLAADIYRPAGAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQ-GYAVVNQDVRGRGGSEGVF 98 (563)
T ss_pred eeeeEEecCCeEEEEEEEccCCCCCCceeEEeeccccccccccCcchhhcccccceeecC-ceEEEEecccccccCCccc
Confidence 3456888899999999997765566788888883333322 111 1122 34444 9999999999999998644
Q ss_pred CC--C-ccchHHHHHHHHHHhCC-CCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 111 LR--T-VKTEACDVEQLADKLQI-GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 111 ~~--~-~~~~~~dl~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
.. + -.+-..|+.+++..... +.+|..+|.|++|...+.+|+..|..+++++...+..+
T Consensus 99 ~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 99 DPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred ceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 32 3 11223345555544432 36999999999999999999998888999998888765
No 151
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.75 E-value=1.5e-07 Score=73.36 Aligned_cols=102 Identities=16% Similarity=0.194 Sum_probs=69.3
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCC------CC--CC--------------CC-------
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESD------PH--PL--------------RT------- 113 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~------~~--~~--------------~~------- 113 (341)
.-|.+||-||++++...|..++-.|+.+ ||-|.+++.|-+-.+- .+ .. ..
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LASh-G~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNe 195 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASH-GFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNE 195 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhC-ceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCH
Confidence 4588999999999999999999999886 9999999998653321 10 00 00
Q ss_pred -ccchHHHHHHH---HHHhC----------------------C-CCcEEEEEeccChHHHHHHHhhccccccceeeeccc
Q 038973 114 -VKTEACDVEQL---ADKLQ----------------------I-GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPF 166 (341)
Q Consensus 114 -~~~~~~dl~~~---l~~l~----------------------~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~ 166 (341)
...-++.+..+ ++.++ + ..++.++|||+||..++...+.+. .++..|++++.
T Consensus 196 qv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t-~FrcaI~lD~W 274 (399)
T KOG3847|consen 196 QVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHT-DFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcccc-ceeeeeeeeee
Confidence 01112222222 22221 0 147899999999999987777654 68888888875
No 152
>COG3150 Predicted esterase [General function prediction only]
Probab=98.73 E-value=5.2e-07 Score=63.66 Aligned_cols=90 Identities=23% Similarity=0.292 Sum_probs=67.7
Q ss_pred EEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHH
Q 038973 67 IIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPV 146 (341)
Q Consensus 67 vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a 146 (341)
||++||+.+|..+.... +..+ .+..|.|-.+.|.+....+....++.++.++..++. +...++|-|+||..|
T Consensus 2 ilYlHGFnSSP~shka~---l~~q----~~~~~~~~i~y~~p~l~h~p~~a~~ele~~i~~~~~-~~p~ivGssLGGY~A 73 (191)
T COG3150 2 ILYLHGFNSSPGSHKAV---LLLQ----FIDEDVRDIEYSTPHLPHDPQQALKELEKAVQELGD-ESPLIVGSSLGGYYA 73 (191)
T ss_pred eEEEecCCCCcccHHHH---HHHH----HHhccccceeeecCCCCCCHHHHHHHHHHHHHHcCC-CCceEEeecchHHHH
Confidence 89999999988887633 2221 233555555666655566888999999999999986 679999999999999
Q ss_pred HHHHhhccccccceeeecccc
Q 038973 147 YGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 147 ~~~a~~~p~~v~~~il~~~~~ 167 (341)
.+++.++. ++++ ++||..
T Consensus 74 t~l~~~~G--irav-~~NPav 91 (191)
T COG3150 74 TWLGFLCG--IRAV-VFNPAV 91 (191)
T ss_pred HHHHHHhC--Chhh-hcCCCc
Confidence 99999864 5554 556654
No 153
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.72 E-value=1.2e-07 Score=74.78 Aligned_cols=121 Identities=21% Similarity=0.277 Sum_probs=76.6
Q ss_pred ceEccCCcEEE---EEEccCCCCCCCceEEEEcCCCCCCCcch-hhHHHHHHhcCceEEEEcCCCCCCCCCCCCC-Cccc
Q 038973 42 RIKLSDGRHVA---YREAGVPKEEANHKIIIIHGFGSSKDLNL-PVSQELIEELKIYFLSFDRPGYGESDPHPLR-TVKT 116 (341)
Q Consensus 42 ~~~~~~g~~l~---~~~~g~~~~~~~~~vl~~hG~~~~~~~~~-~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~-~~~~ 116 (341)
.++..||.+|- ....+...+..+..||++-|..+- |+ .++..-++ .||.|+.+++||++.|...+-. +-..
T Consensus 218 kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGF---YEvG~m~tP~~-lgYsvLGwNhPGFagSTG~P~p~n~~n 293 (517)
T KOG1553|consen 218 KIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGF---YEVGVMNTPAQ-LGYSVLGWNHPGFAGSTGLPYPVNTLN 293 (517)
T ss_pred EEeecCCcchhheeecCCCCCCCCCceEEEEecCCccc---eEeeeecChHH-hCceeeccCCCCccccCCCCCcccchH
Confidence 45555655433 233333223334566777665442 32 22222233 3899999999999999865532 2222
Q ss_pred hHHHH-HHHHHHhCC-CCcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 117 EACDV-EQLADKLQI-GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 117 ~~~dl-~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
.++.+ .-.+..++. .+.+++.|||.||..++++|..||+ |+++|+-+++-
T Consensus 294 A~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtFD 345 (517)
T KOG1553|consen 294 AADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATFD 345 (517)
T ss_pred HHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecchh
Confidence 22333 334556654 2689999999999999999999996 99999988753
No 154
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.68 E-value=9.8e-07 Score=64.85 Aligned_cols=120 Identities=15% Similarity=0.163 Sum_probs=79.3
Q ss_pred CcEEEEEEccCCC---CCCCceEEEEcCCCCCCCcch--hhHHHHHHhcCceEEEEcC--CCC---CCCCCCC-----C-
Q 038973 48 GRHVAYREAGVPK---EEANHKIIIIHGFGSSKDLNL--PVSQELIEELKIYFLSFDR--PGY---GESDPHP-----L- 111 (341)
Q Consensus 48 g~~l~~~~~g~~~---~~~~~~vl~~hG~~~~~~~~~--~~~~~l~~~~~~~vi~~D~--~G~---G~S~~~~-----~- 111 (341)
+..|.+-.+-++. ++.-|++.++.|+..+.+.+- ....+.+.++|+.|+.+|- ||. |+++... +
T Consensus 25 ~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGF 104 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGF 104 (283)
T ss_pred ccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCcee
Confidence 3456665554443 223478899999999887765 4556677788999999994 443 2222100 0
Q ss_pred ---CCccch----------HHHHHHHHHH----hCCCCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 112 ---RTVKTE----------ACDVEQLADK----LQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 112 ---~~~~~~----------~~dl~~~l~~----l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
.+-+-| .+.+-++++. +.. .++.+.||||||.=|+..+.+.|.+.+++-..+|.++
T Consensus 105 YvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~-~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~N 177 (283)
T KOG3101|consen 105 YVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDP-LKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICN 177 (283)
T ss_pred EEecccchHhhhhhHHHHHHHHHHHHhccccccccc-hhcceeccccCCCceEEEEEcCcccccceeccccccC
Confidence 022222 3344444442 233 5799999999999999999999999999988888754
No 155
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.65 E-value=9.6e-08 Score=78.88 Aligned_cols=100 Identities=20% Similarity=0.211 Sum_probs=77.7
Q ss_pred CceEEEEcCCCCCCCcchhhHHHHHHhcCce---EEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEec
Q 038973 64 NHKIIIIHGFGSSKDLNLPVSQELIEELKIY---FLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGIS 140 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~---vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS 140 (341)
.-+++++||+..+...|..+...+... |+. ++.++.++. ....+.....+.+..-+.+++...+. +++.++|||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~-~~~~~~~~~~~ql~~~V~~~l~~~ga-~~v~LigHS 135 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAIL-GWLTNGVYAFELSGG-DGTYSLAVRGEQLFAYVDEVLAKTGA-KKVNLIGHS 135 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcch-HHHhccccccccccc-CCCccccccHHHHHHHHHHHHhhcCC-CceEEEeec
Confidence 459999999988888888777665443 655 888888866 22222233555666667777777787 899999999
Q ss_pred cChHHHHHHHhhcc--ccccceeeeccc
Q 038973 141 MGAYPVYGCLKYIP--QRLAGASLVVPF 166 (341)
Q Consensus 141 ~Gg~~a~~~a~~~p--~~v~~~il~~~~ 166 (341)
|||..+..++...+ .+|+.++.++++
T Consensus 136 ~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 136 MGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred ccchhhHHHHhhcCccceEEEEEEeccC
Confidence 99999999998887 799999999975
No 156
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.57 E-value=1e-05 Score=68.74 Aligned_cols=119 Identities=13% Similarity=0.013 Sum_probs=70.2
Q ss_pred CcEEEEEEccCCC--CCCCceEEEEcCCCCCCC-cchhhHHHHHHhcC---ceEEEEcCCCC-CCCCC-CCCC-CccchH
Q 038973 48 GRHVAYREAGVPK--EEANHKIIIIHGFGSSKD-LNLPVSQELIEELK---IYFLSFDRPGY-GESDP-HPLR-TVKTEA 118 (341)
Q Consensus 48 g~~l~~~~~g~~~--~~~~~~vl~~hG~~~~~~-~~~~~~~~l~~~~~---~~vi~~D~~G~-G~S~~-~~~~-~~~~~~ 118 (341)
|.+..+..+.++. +++.|+|+++||...... .....+..|.++.. ..|+.+|..+. .++.. +... -.+.++
T Consensus 191 g~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~ 270 (411)
T PRK10439 191 GNSRRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQ 270 (411)
T ss_pred CCceEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHH
Confidence 3334444444432 234688899999642211 12244556655421 33677775321 11111 1111 122334
Q ss_pred HHHHHHHHHh-----CCCCcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 119 CDVEQLADKL-----QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 119 ~dl~~~l~~l-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
++|.-.++.. +. ++.+|.|+||||..|+.++.++|+++.+++.+++..
T Consensus 271 ~eLlP~I~~~y~~~~d~-~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 271 QELLPQVRAIAPFSDDA-DRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHhCCCCCCc-cceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 5555555543 22 578999999999999999999999999999999863
No 157
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.55 E-value=0.00016 Score=59.19 Aligned_cols=103 Identities=18% Similarity=0.145 Sum_probs=66.0
Q ss_pred CCCceEEEEcCCCCCCCcc---hhhHHHHHHhcCceEEEEcCCC--CCCCCC----------CC-----CC---------
Q 038973 62 EANHKIIIIHGFGSSKDLN---LPVSQELIEELKIYFLSFDRPG--YGESDP----------HP-----LR--------- 112 (341)
Q Consensus 62 ~~~~~vl~~hG~~~~~~~~---~~~~~~l~~~~~~~vi~~D~~G--~G~S~~----------~~-----~~--------- 112 (341)
+....||++||.+.+...- .++-..|.+ +|+..+++.+|. ...... .. ..
T Consensus 85 ~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~-~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 163 (310)
T PF12048_consen 85 KPQGAVIILPDWGEHPDWPGLIAPLRRELPD-HGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASA 163 (310)
T ss_pred CCceEEEEecCCCCCCCcHhHHHHHHHHhhh-cCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccc
Confidence 4567999999999886532 244444544 599999998887 110000 00 00
Q ss_pred ----Cc----cchHHHHHHHHHHh---CCCCcEEEEEeccChHHHHHHHhhccc-cccceeeeccc
Q 038973 113 ----TV----KTEACDVEQLADKL---QIGSKFYVIGISMGAYPVYGCLKYIPQ-RLAGASLVVPF 166 (341)
Q Consensus 113 ----~~----~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~p~-~v~~~il~~~~ 166 (341)
.. +.+.+-|.+.+..+ +. .+++|+||+.|+..++.+....+. .++++|++++.
T Consensus 164 ~~~~~~~~~~~~~~ari~Aa~~~~~~~~~-~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~ 228 (310)
T PF12048_consen 164 QEAEAREAYEERLFARIEAAIAFAQQQGG-KNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAY 228 (310)
T ss_pred cHhHHhHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCC
Confidence 01 11222233333333 43 569999999999999999888764 59999999985
No 158
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.53 E-value=4.3e-07 Score=60.95 Aligned_cols=59 Identities=17% Similarity=0.260 Sum_probs=53.8
Q ss_pred CCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCcccccC-HHHHHHHHHHHhh
Q 038973 282 NEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIFE-RKFCEAIIRALLV 340 (341)
Q Consensus 282 i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 340 (341)
...|+|++.++.|+++|.+.++.+++.++++++++++|.||..... ...+.+++.+||.
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYLL 92 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999999865 7778889988885
No 159
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.52 E-value=2.8e-06 Score=64.21 Aligned_cols=80 Identities=16% Similarity=0.236 Sum_probs=53.2
Q ss_pred CceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccCh
Q 038973 64 NHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGA 143 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg 143 (341)
+..|||..|++++...+.++.. ...++. ++++|+|..- ++. | .-+. +.+.|||+|||-
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~~--~~~~D~-l~~yDYr~l~---------~d~---~------~~~y-~~i~lvAWSmGV 68 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLIL--PENYDV-LICYDYRDLD---------FDF---D------LSGY-REIYLVAWSMGV 68 (213)
T ss_pred CeEEEEEecCCCChHHhhhccC--CCCccE-EEEecCcccc---------ccc---c------cccC-ceEEEEEEeHHH
Confidence 4689999999999887765421 122232 5678887331 110 1 1234 799999999999
Q ss_pred HHHHHHHhhccccccceeeecccc
Q 038973 144 YPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 144 ~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
.+|..+.... .++..|.+++..
T Consensus 69 w~A~~~l~~~--~~~~aiAINGT~ 90 (213)
T PF04301_consen 69 WAANRVLQGI--PFKRAIAINGTP 90 (213)
T ss_pred HHHHHHhccC--CcceeEEEECCC
Confidence 9998876654 366767777653
No 160
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.52 E-value=3.2e-06 Score=66.93 Aligned_cols=58 Identities=10% Similarity=0.018 Sum_probs=48.8
Q ss_pred CCccEEEEEeecCCCCChHHHHHHHhhCC----CcEEEEecCCCcccccC--HHHHHHHHHHHh
Q 038973 282 NEGSVHIWQGCEDRIIPSQINQFISEKLP----WIQYHEVPDAGHLFIFE--RKFCEAIIRALL 339 (341)
Q Consensus 282 i~~Pvlii~g~~D~~~p~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e--p~~~~~~i~~fl 339 (341)
..+|-++++++.|.+++.+..++.++... +++...++++.|..|.. |++..+.+.+|+
T Consensus 177 ~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 177 SRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 34669999999999999988877765542 37888899999999985 999999999885
No 161
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=98.52 E-value=1.2e-05 Score=68.62 Aligned_cols=131 Identities=18% Similarity=0.150 Sum_probs=78.4
Q ss_pred CCCCceEccC--CcEEEEEEccCC-CCCCCceEEEEcCCCCCCCcchh---hHH-------------HHHHh-----cCc
Q 038973 38 VTSPRIKLSD--GRHVAYREAGVP-KEEANHKIIIIHGFGSSKDLNLP---VSQ-------------ELIEE-----LKI 93 (341)
Q Consensus 38 ~~~~~~~~~~--g~~l~~~~~g~~-~~~~~~~vl~~hG~~~~~~~~~~---~~~-------------~l~~~-----~~~ 93 (341)
....++.+.+ +..++|....+. .....|.|+.+.|.++++..+.. ..+ .+... ...
T Consensus 37 ~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~a 116 (433)
T PLN03016 37 LETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMA 116 (433)
T ss_pred EEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcC
Confidence 3456676643 567888776542 23457999999999887764321 111 11000 024
Q ss_pred eEEEEc-CCCCCCCCCCC--CCCc-cchHHHHHHHHHHh----C--CCCcEEEEEeccChHHHHHHHhh----c------
Q 038973 94 YFLSFD-RPGYGESDPHP--LRTV-KTEACDVEQLADKL----Q--IGSKFYVIGISMGAYPVYGCLKY----I------ 153 (341)
Q Consensus 94 ~vi~~D-~~G~G~S~~~~--~~~~-~~~~~dl~~~l~~l----~--~~~~~~lvGhS~Gg~~a~~~a~~----~------ 153 (341)
.++-+| ..|.|.|-... ..+- .+.++++..++... . ...+++|.|.|+||..+-.+|.. .
T Consensus 117 nllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~ 196 (433)
T PLN03016 117 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 196 (433)
T ss_pred cEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCC
Confidence 599999 66999985322 2211 12345555555442 1 12689999999999866555532 1
Q ss_pred cccccceeeeccccc
Q 038973 154 PQRLAGASLVVPFVH 168 (341)
Q Consensus 154 p~~v~~~il~~~~~~ 168 (341)
+-.++|+++-++...
T Consensus 197 ~inLkGi~iGNg~t~ 211 (433)
T PLN03016 197 PINLQGYMLGNPVTY 211 (433)
T ss_pred cccceeeEecCCCcC
Confidence 226789999888653
No 162
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.49 E-value=6.4e-07 Score=69.37 Aligned_cols=87 Identities=15% Similarity=0.180 Sum_probs=50.2
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHH---hcCceEEEEcCCCCCCCCCCCCCCccchHH----HHHHHHHHhCCC-CcE
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIE---ELKIYFLSFDRPGYGESDPHPLRTVKTEAC----DVEQLADKLQIG-SKF 134 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~---~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~----dl~~~l~~l~~~-~~~ 134 (341)
+.-.|||+||+.++...|..+...+.. +..-. .+...+..........+++..++ +|.+.++..... .++
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~--~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~I 80 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNA--RIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKI 80 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchh--hhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccc
Confidence 345899999999999999877776665 21111 11222221111111224444444 444444433331 489
Q ss_pred EEEEeccChHHHHHHHh
Q 038973 135 YVIGISMGAYPVYGCLK 151 (341)
Q Consensus 135 ~lvGhS~Gg~~a~~~a~ 151 (341)
++|||||||.++-.+..
T Consensus 81 sfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 81 SFIGHSLGGLIARYALG 97 (217)
T ss_pred eEEEecccHHHHHHHHH
Confidence 99999999999865443
No 163
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.48 E-value=4.9e-05 Score=62.56 Aligned_cols=106 Identities=17% Similarity=0.229 Sum_probs=68.2
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHhc----CceEEEEcCCCCCCC--CCCCCCCccchHHHHHHHHHHhCCCCcEEE
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEEL----KIYFLSFDRPGYGES--DPHPLRTVKTEACDVEQLADKLQIGSKFYV 136 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~----~~~vi~~D~~G~G~S--~~~~~~~~~~~~~dl~~~l~~l~~~~~~~l 136 (341)
..|.||++||+|..-......+..+..-+ ...++..|+.-...- +..-...+.+.++-...+++..|. ++++|
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~-~nI~L 199 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGN-KNIIL 199 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcCCCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCC-CeEEE
Confidence 46999999999876555543333322210 346888887644300 111122455556666666666676 89999
Q ss_pred EEeccChHHHHHHHhhc--cc---cccceeeecccccc
Q 038973 137 IGISMGAYPVYGCLKYI--PQ---RLAGASLVVPFVHY 169 (341)
Q Consensus 137 vGhS~Gg~~a~~~a~~~--p~---~v~~~il~~~~~~~ 169 (341)
+|-|.||.+++.+++.- ++ .-+++|+++|.+..
T Consensus 200 mGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l 237 (374)
T PF10340_consen 200 MGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNL 237 (374)
T ss_pred EecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCC
Confidence 99999999998876531 11 35789999998763
No 164
>PLN02209 serine carboxypeptidase
Probab=98.48 E-value=2.8e-05 Score=66.47 Aligned_cols=130 Identities=21% Similarity=0.227 Sum_probs=79.7
Q ss_pred CCCceEccC--CcEEEEEEccCCC-CCCCceEEEEcCCCCCCCcchhhH---H-------------HHHHh-----cCce
Q 038973 39 TSPRIKLSD--GRHVAYREAGVPK-EEANHKIIIIHGFGSSKDLNLPVS---Q-------------ELIEE-----LKIY 94 (341)
Q Consensus 39 ~~~~~~~~~--g~~l~~~~~g~~~-~~~~~~vl~~hG~~~~~~~~~~~~---~-------------~l~~~-----~~~~ 94 (341)
...++.+.+ +..++|....+.. .+..|.++++.|.++++..+..+. + .+... .-..
T Consensus 40 ~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~an 119 (437)
T PLN02209 40 ETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTAN 119 (437)
T ss_pred EEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCc
Confidence 445566643 5678887765432 245799999999998876653211 0 11000 0245
Q ss_pred EEEEc-CCCCCCCCCCC--CC-CccchHHHHHHHHHHh----C--CCCcEEEEEeccChHHHHHHHhh----c------c
Q 038973 95 FLSFD-RPGYGESDPHP--LR-TVKTEACDVEQLADKL----Q--IGSKFYVIGISMGAYPVYGCLKY----I------P 154 (341)
Q Consensus 95 vi~~D-~~G~G~S~~~~--~~-~~~~~~~dl~~~l~~l----~--~~~~~~lvGhS~Gg~~a~~~a~~----~------p 154 (341)
++-+| ..|.|.|-... .. +-++.++|+..++..+ . ...+++|.|.|+||..+-.+|.. . +
T Consensus 120 llfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~ 199 (437)
T PLN02209 120 IIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP 199 (437)
T ss_pred EEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCc
Confidence 89999 66999885322 12 3334556666666543 1 12589999999999866555532 1 1
Q ss_pred ccccceeeeccccc
Q 038973 155 QRLAGASLVVPFVH 168 (341)
Q Consensus 155 ~~v~~~il~~~~~~ 168 (341)
-.++++++.++...
T Consensus 200 inl~Gi~igng~td 213 (437)
T PLN02209 200 INLQGYVLGNPITH 213 (437)
T ss_pred eeeeeEEecCcccC
Confidence 25789999988764
No 165
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.47 E-value=1.2e-06 Score=75.71 Aligned_cols=104 Identities=19% Similarity=0.151 Sum_probs=71.5
Q ss_pred CceEEEEcCCCCCCCcc---hhhHHHHHHhcCceEEEEcCCCCCCCCCCCC-------C-CccchHHHHHHHHHHhC---
Q 038973 64 NHKIIIIHGFGSSKDLN---LPVSQELIEELKIYFLSFDRPGYGESDPHPL-------R-TVKTEACDVEQLADKLQ--- 129 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~~---~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~-------~-~~~~~~~dl~~~l~~l~--- 129 (341)
+|.+|++ |.-++.... ..++..+++++|-.|+++++|-+|.|.+..+ + +.++..+|+..+++++.
T Consensus 29 gpifl~~-ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 29 GPIFLYI-GGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEE-CCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 4555555 544443322 2467788999899999999999999986432 2 77888899998888763
Q ss_pred ---CCCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 130 ---IGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 130 ---~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
.+.|++++|-|+||++|.++-.+||+.|.+.+.-++++.
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CC
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceee
Confidence 225899999999999999999999999999998887764
No 166
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.41 E-value=0.00013 Score=62.12 Aligned_cols=132 Identities=18% Similarity=0.148 Sum_probs=83.1
Q ss_pred CCCCCceEcc--CCcEEEEEEccCCC-CCCCceEEEEcCCCCCCCcchhhHHHHH----Hhc-------------CceEE
Q 038973 37 PVTSPRIKLS--DGRHVAYREAGVPK-EEANHKIIIIHGFGSSKDLNLPVSQELI----EEL-------------KIYFL 96 (341)
Q Consensus 37 ~~~~~~~~~~--~g~~l~~~~~g~~~-~~~~~~vl~~hG~~~~~~~~~~~~~~l~----~~~-------------~~~vi 96 (341)
.....++.+. .+..++|+-..+.. +..+|.||.+.|++|.+..- .++.++- ... --.++
T Consensus 43 ~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiL 121 (454)
T KOG1282|consen 43 KQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANIL 121 (454)
T ss_pred ccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEE
Confidence 3455677775 48889998775533 34578999999999887544 2222211 000 12388
Q ss_pred EEcCC-CCCCCCCCC--C--CCccchHHHHHHHHHHh-C-----CCCcEEEEEeccChHHHHHHHh----hc------cc
Q 038973 97 SFDRP-GYGESDPHP--L--RTVKTEACDVEQLADKL-Q-----IGSKFYVIGISMGAYPVYGCLK----YI------PQ 155 (341)
Q Consensus 97 ~~D~~-G~G~S~~~~--~--~~~~~~~~dl~~~l~~l-~-----~~~~~~lvGhS~Gg~~a~~~a~----~~------p~ 155 (341)
-+|.| |.|.|-... . .+-+..++|+..++... . .+.+++|.|-|++|...-.+|. .+ +-
T Consensus 122 fLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~i 201 (454)
T KOG1282|consen 122 FLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNI 201 (454)
T ss_pred EEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcc
Confidence 88876 788774222 1 24455567766665432 1 1368999999999976655553 22 13
Q ss_pred cccceeeecccccc
Q 038973 156 RLAGASLVVPFVHY 169 (341)
Q Consensus 156 ~v~~~il~~~~~~~ 169 (341)
.++|+++-+|....
T Consensus 202 NLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 202 NLKGYAIGNGLTDP 215 (454)
T ss_pred cceEEEecCcccCc
Confidence 58899988887753
No 167
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.37 E-value=9.4e-06 Score=69.24 Aligned_cols=44 Identities=18% Similarity=0.246 Sum_probs=37.9
Q ss_pred CCccEEEEEeecCCCCChHHHHHHHhhC-CCcEEEEecCCCcccc
Q 038973 282 NEGSVHIWQGCEDRIIPSQINQFISEKL-PWIQYHEVPDAGHLFI 325 (341)
Q Consensus 282 i~~Pvlii~g~~D~~~p~~~~~~~~~~~-~~~~~~~~~~~gH~~~ 325 (341)
++.|+||+.|.+|..++++..+.+++.. ...+++++.+++|.+-
T Consensus 303 mk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsma 347 (784)
T KOG3253|consen 303 MKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMA 347 (784)
T ss_pred cCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCcccc
Confidence 4445999999999999999999999888 4578999999999654
No 168
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.35 E-value=7.4e-05 Score=55.73 Aligned_cols=101 Identities=17% Similarity=0.217 Sum_probs=72.5
Q ss_pred CceEEEEcCCCCCCCc---chhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCC---CCcEEEE
Q 038973 64 NHKIIIIHGFGSSKDL---NLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQI---GSKFYVI 137 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~---~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~---~~~~~lv 137 (341)
+.-|||+-|++..--. -..+...|.+. +|.++-+.++.+-. .....++++-++|+..+++|++. ...++|+
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde~-~wslVq~q~~Ssy~--G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~ 112 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDEN-SWSLVQPQLRSSYN--GYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLV 112 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhhc-cceeeeeecccccc--ccccccccccHHHHHHHHHHhhccCcccceEEE
Confidence 3578899888765332 23555566554 89999888763211 01123788999999999998854 2489999
Q ss_pred EeccChHHHHHHHh--hccccccceeeecccc
Q 038973 138 GISMGAYPVYGCLK--YIPQRLAGASLVVPFV 167 (341)
Q Consensus 138 GhS~Gg~~a~~~a~--~~p~~v~~~il~~~~~ 167 (341)
|||.|..=.+.|.. ..|..|++.|+.+|..
T Consensus 113 GhSTGcQdi~yYlTnt~~~r~iraaIlqApVS 144 (299)
T KOG4840|consen 113 GHSTGCQDIMYYLTNTTKDRKIRAAILQAPVS 144 (299)
T ss_pred ecCccchHHHHHHHhccchHHHHHHHHhCccc
Confidence 99999998887773 2466788999988874
No 169
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.34 E-value=8.3e-07 Score=70.96 Aligned_cols=120 Identities=12% Similarity=0.011 Sum_probs=70.5
Q ss_pred CcEEEEEEccCCC---CCCCceEEEEcCCCCCCCcc--hhhHHHHHHhcC---ceEEEEcCCCCCCCC--CC--------
Q 038973 48 GRHVAYREAGVPK---EEANHKIIIIHGFGSSKDLN--LPVSQELIEELK---IYFLSFDRPGYGESD--PH-------- 109 (341)
Q Consensus 48 g~~l~~~~~g~~~---~~~~~~vl~~hG~~~~~~~~--~~~~~~l~~~~~---~~vi~~D~~G~G~S~--~~-------- 109 (341)
|....+.++-|+. .+.-|+|+++||.......+ ...+..+.++.+ ..+++++..+.+... ..
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRR 84 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCB
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccc
Confidence 3445555554432 23447888999972211111 133344444422 346777766555110 00
Q ss_pred -CC-C---Cc-cchHHHHHHHHHHh-CCC-CcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 110 -PL-R---TV-KTEACDVEQLADKL-QIG-SKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 110 -~~-~---~~-~~~~~dl~~~l~~l-~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
.. . .+ +-+.++|...++.. ... ++..++|+||||..|+.++.++|+.+.+++.++|..
T Consensus 85 ~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~ 150 (251)
T PF00756_consen 85 ADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGAL 150 (251)
T ss_dssp CTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEES
T ss_pred cccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccc
Confidence 00 1 11 22344566565543 321 238999999999999999999999999999999874
No 170
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.31 E-value=5.6e-06 Score=72.78 Aligned_cols=125 Identities=12% Similarity=0.082 Sum_probs=74.0
Q ss_pred CCceEccCCcEEEEEEccCC------CCCCCceEEEEcCCCCCCCcchhhHHHHHHh---------------cCceEEEE
Q 038973 40 SPRIKLSDGRHVAYREAGVP------KEEANHKIIIIHGFGSSKDLNLPVSQELIEE---------------LKIYFLSF 98 (341)
Q Consensus 40 ~~~~~~~~g~~l~~~~~g~~------~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~---------------~~~~vi~~ 98 (341)
++.-...+-..++.+..|.. .+.++-||+|++|..|+-..-+.++...... +.|+.++.
T Consensus 59 ~r~t~~a~kY~LYLY~Egs~~~e~~~lelsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaV 138 (973)
T KOG3724|consen 59 ERLTPQADKYSLYLYREGSRWWERSTLELSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAV 138 (973)
T ss_pred ccccCCCCceEEEEecccccccccccccCCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEE
Confidence 33333445555555444432 2335679999999999988777776655421 13556666
Q ss_pred cCCCCCCCCCCCCCCccchHHHHHHHHHHh-----C-------CCCcEEEEEeccChHHHHHHHhh---ccccccceeee
Q 038973 99 DRPGYGESDPHPLRTVKTEACDVEQLADKL-----Q-------IGSKFYVIGISMGAYPVYGCLKY---IPQRLAGASLV 163 (341)
Q Consensus 99 D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l-----~-------~~~~~~lvGhS~Gg~~a~~~a~~---~p~~v~~~il~ 163 (341)
|+-+ +=..-.+.++.++++-+.+.++.. + ....++++||||||.+|..++.. .++.|.-++..
T Consensus 139 DFnE--e~tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITl 216 (973)
T KOG3724|consen 139 DFNE--EFTAMHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITL 216 (973)
T ss_pred cccc--hhhhhccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhh
Confidence 6642 000111235777777666655533 1 12459999999999999876643 23456666666
Q ss_pred ccc
Q 038973 164 VPF 166 (341)
Q Consensus 164 ~~~ 166 (341)
+++
T Consensus 217 ssP 219 (973)
T KOG3724|consen 217 SSP 219 (973)
T ss_pred cCc
Confidence 654
No 171
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.29 E-value=4.1e-06 Score=67.31 Aligned_cols=106 Identities=17% Similarity=0.334 Sum_probs=65.6
Q ss_pred CCCceEEEEcCCCCCCCcchhhHHHHHHhc--CceEEEEcCCCCCCCCCC--CCCCccchHHHHHHHHHHh----CCCCc
Q 038973 62 EANHKIIIIHGFGSSKDLNLPVSQELIEEL--KIYFLSFDRPGYGESDPH--PLRTVKTEACDVEQLADKL----QIGSK 133 (341)
Q Consensus 62 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~--~~~vi~~D~~G~G~S~~~--~~~~~~~~~~dl~~~l~~l----~~~~~ 133 (341)
..+..+||+||+..+-+.=-.-..++.... ....+.+.||..|.--.- ...+...-..+++.++..+ .. ++
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~-~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPV-KR 192 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCC-ce
Confidence 356789999999876433221122222222 345788999977753211 1112333344555555544 45 79
Q ss_pred EEEEEeccChHHHHHHHhh--------ccccccceeeeccccc
Q 038973 134 FYVIGISMGAYPVYGCLKY--------IPQRLAGASLVVPFVH 168 (341)
Q Consensus 134 ~~lvGhS~Gg~~a~~~a~~--------~p~~v~~~il~~~~~~ 168 (341)
++|++||||.+++++...+ -+.+|+-+|+-+|-.+
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 9999999999999887643 2457888999887543
No 172
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.27 E-value=3.7e-05 Score=58.90 Aligned_cols=54 Identities=20% Similarity=0.196 Sum_probs=44.5
Q ss_pred EEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCccccc-C-HHHHHHHHHHHhh
Q 038973 286 VHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIF-E-RKFCEAIIRALLV 340 (341)
Q Consensus 286 vlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e-p~~~~~~i~~fl~ 340 (341)
+.++.+.+|..+|......+.+..|++++..++ +||.-.+ . .+.+...|.+-|.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~ 364 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLD 364 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHHHHHH
Confidence 777889999999998899999999999999999 6996543 3 6777777776654
No 173
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.24 E-value=5.6e-06 Score=73.11 Aligned_cols=105 Identities=16% Similarity=0.043 Sum_probs=66.8
Q ss_pred CCCceEEEEcCCCCC---CCcchhhHHHHHHhcC-ceEEEEcCC----CCCCCCC---CCCCCccchH---HHHHHHHHH
Q 038973 62 EANHKIIIIHGFGSS---KDLNLPVSQELIEELK-IYFLSFDRP----GYGESDP---HPLRTVKTEA---CDVEQLADK 127 (341)
Q Consensus 62 ~~~~~vl~~hG~~~~---~~~~~~~~~~l~~~~~-~~vi~~D~~----G~G~S~~---~~~~~~~~~~---~dl~~~l~~ 127 (341)
+..|++|++||.+.. ...+ ....+..+.+ +.|+++++| |+..+.. +....+.|+. +.+.+-++.
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~ 170 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAA 170 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHH
Confidence 456999999997632 2222 3345555544 899999999 3333221 1122334443 334444455
Q ss_pred hCC-CCcEEEEEeccChHHHHHHHhh--ccccccceeeeccccc
Q 038973 128 LQI-GSKFYVIGISMGAYPVYGCLKY--IPQRLAGASLVVPFVH 168 (341)
Q Consensus 128 l~~-~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~~il~~~~~~ 168 (341)
+|. .++|.|+|+|.||..+..++.. .+..++++|++++...
T Consensus 171 fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 171 FGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred hCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 543 2699999999999998877765 2456899999987654
No 174
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=98.18 E-value=6.1e-05 Score=64.65 Aligned_cols=137 Identities=20% Similarity=0.129 Sum_probs=89.7
Q ss_pred CCCCCCCCCCCceEccCCcEEEEEEccCC-CCCCCceEEEEcCCCCC--CCcchhhHHHHHHhcCceEEEEcCCCCCCCC
Q 038973 31 GSPGGPPVTSPRIKLSDGRHVAYREAGVP-KEEANHKIIIIHGFGSS--KDLNLPVSQELIEELKIYFLSFDRPGYGESD 107 (341)
Q Consensus 31 ~~~~~~~~~~~~~~~~~g~~l~~~~~g~~-~~~~~~~vl~~hG~~~~--~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~ 107 (341)
....+...++.+.+..||.+|.|...+.+ +.++.|++|+--|...- .-.|.+......++ |...+..++||-|+-.
T Consensus 387 FDa~~~~veQ~~atSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLer-Gg~~v~ANIRGGGEfG 465 (648)
T COG1505 387 FDADNYEVEQFFATSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLER-GGVFVLANIRGGGEFG 465 (648)
T ss_pred cCccCceEEEEEEEcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHhc-CCeEEEEecccCCccC
Confidence 33444556677777789999999888633 22357787776555433 23455555455555 7777888999988764
Q ss_pred CC-----CCCCccchHHHHHHHHHHh---CC--CCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 108 PH-----PLRTVKTEACDVEQLADKL---QI--GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 108 ~~-----~~~~~~~~~~dl~~~l~~l---~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
+. ...+-+...+|..++.+.| |+ .+++.+-|-|-||.+.-....++|+.+.++|+--|..+
T Consensus 466 p~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllD 536 (648)
T COG1505 466 PEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLD 536 (648)
T ss_pred HHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhh
Confidence 21 0112333344444444443 22 25789999999999988888889999999888777653
No 175
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.16 E-value=0.00024 Score=58.77 Aligned_cols=120 Identities=18% Similarity=0.222 Sum_probs=79.6
Q ss_pred CcEEEEEEccCCCCCCCceEEEEcCCCCCCCc--chhhHHHHHHhcCceEEEEcCCCCCCCCCCCC--------------
Q 038973 48 GRHVAYREAGVPKEEANHKIIIIHGFGSSKDL--NLPVSQELIEELKIYFLSFDRPGYGESDPHPL-------------- 111 (341)
Q Consensus 48 g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~--~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~-------------- 111 (341)
..++.|+..-.+..+.+..|+++.|+|++... ++...+.++++++..|+.+++-|+|.......
T Consensus 19 ~sKLEyri~ydd~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk~ 98 (403)
T PF11144_consen 19 ESKLEYRISYDDEKEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILKK 98 (403)
T ss_pred cceeeEEeecCCCCCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHHHHHHH
Confidence 45678887655554556788889999998764 45677788888888888888888774432100
Q ss_pred ----CCc--------c---c-------------------------------------------hHHHHHHHHHHh----C
Q 038973 112 ----RTV--------K---T-------------------------------------------EACDVEQLADKL----Q 129 (341)
Q Consensus 112 ----~~~--------~---~-------------------------------------------~~~dl~~~l~~l----~ 129 (341)
..+ + . .|-|+..++..+ .
T Consensus 99 ~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~~ 178 (403)
T PF11144_consen 99 SLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIFP 178 (403)
T ss_pred HHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhhh
Confidence 000 0 0 011221111111 1
Q ss_pred -CC--CcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 130 -IG--SKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 130 -~~--~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
.+ -|++++|+|.||.+|..+|.-.|..+++++=-++.+
T Consensus 179 ~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 179 KNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred cccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 11 389999999999999999999999999888777654
No 176
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.14 E-value=2.3e-05 Score=66.40 Aligned_cols=112 Identities=16% Similarity=0.115 Sum_probs=70.0
Q ss_pred ceEccCCcEEEEEEccCCCCCCCceEEEEc-CCCCCCCcchhhHHHHHHhcCce-----EEE-EcCCCCCCCCCCCCCCc
Q 038973 42 RIKLSDGRHVAYREAGVPKEEANHKIIIIH-GFGSSKDLNLPVSQELIEELKIY-----FLS-FDRPGYGESDPHPLRTV 114 (341)
Q Consensus 42 ~~~~~~g~~l~~~~~g~~~~~~~~~vl~~h-G~~~~~~~~~~~~~~l~~~~~~~-----vi~-~D~~G~G~S~~~~~~~~ 114 (341)
.....+|..+....+|... .|-.+- ........|..+++.|.+. ||. ..+ +|+|---. ..
T Consensus 33 ~~~~~~gv~i~~~~~g~~~-----~i~~ld~~~~~~~~~~~~li~~L~~~-GY~~~~~l~~~pYDWR~~~~-------~~ 99 (389)
T PF02450_consen 33 HYSNDPGVEIRVPGFGGTS-----GIEYLDPSFITGYWYFAKLIENLEKL-GYDRGKDLFAAPYDWRLSPA-------ER 99 (389)
T ss_pred ceecCCCceeecCCCCcee-----eeeecccccccccchHHHHHHHHHhc-CcccCCEEEEEeechhhchh-------hH
Confidence 3444466666665555211 122221 1111222789999999763 664 222 78872211 23
Q ss_pred cchHHHHHHHHHHh---CCCCcEEEEEeccChHHHHHHHhhccc------cccceeeecccc
Q 038973 115 KTEACDVEQLADKL---QIGSKFYVIGISMGAYPVYGCLKYIPQ------RLAGASLVVPFV 167 (341)
Q Consensus 115 ~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~p~------~v~~~il~~~~~ 167 (341)
+++...+...++.. . +++++||||||||.++..+....+. .|+++|.++++.
T Consensus 100 ~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 100 DEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPF 160 (389)
T ss_pred HHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCC
Confidence 45566666666544 3 4899999999999999998877642 599999999874
No 177
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.12 E-value=2.3e-05 Score=63.93 Aligned_cols=104 Identities=22% Similarity=0.148 Sum_probs=80.7
Q ss_pred ceEEEEcCCCCCCCcch---hhHHHHHHhcCceEEEEcCCCCCCCCCCCC----------C-CccchHHHHHHHHHHhCC
Q 038973 65 HKIIIIHGFGSSKDLNL---PVSQELIEELKIYFLSFDRPGYGESDPHPL----------R-TVKTEACDVEQLADKLQI 130 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~---~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~----------~-~~~~~~~dl~~~l~~l~~ 130 (341)
.||+|.-|.-++-+.+. .++-.++.+++--+|-.++|-+|+|.+-.. | +.++-.+|...++.+++-
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 68999999988877665 456677777788899999999999975221 2 555666677777777642
Q ss_pred -----CCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 131 -----GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 131 -----~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
..+++++|-|+||+++.++=.+||..+.|.+.-++++-
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAPVL 203 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCceE
Confidence 25899999999999999999999998888776665543
No 178
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.09 E-value=2.9e-06 Score=69.68 Aligned_cols=57 Identities=18% Similarity=0.235 Sum_probs=46.0
Q ss_pred ccEEEEEeecCCCCChHHHHHHHhhCCC--cEEEEecCCCcccccC--HH--HHHHHHHHHhh
Q 038973 284 GSVHIWQGCEDRIIPSQINQFISEKLPW--IQYHEVPDAGHLFIFE--RK--FCEAIIRALLV 340 (341)
Q Consensus 284 ~Pvlii~g~~D~~~p~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e--p~--~~~~~i~~fl~ 340 (341)
+|+|+++|++|..+|...+..+.+..++ .+...+++++|..... +. +..+.+.+|++
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~ 295 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLE 295 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHH
Confidence 6799999999999999999888888765 5788889999988864 32 56666667765
No 179
>PLN02606 palmitoyl-protein thioesterase
Probab=98.01 E-value=6.8e-05 Score=59.60 Aligned_cols=99 Identities=15% Similarity=0.209 Sum_probs=63.6
Q ss_pred ceEEEEcCCC--CCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCC-CCccchHHHHHHHHHHhC-CCCcEEEEEec
Q 038973 65 HKIIIIHGFG--SSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPL-RTVKTEACDVEQLADKLQ-IGSKFYVIGIS 140 (341)
Q Consensus 65 ~~vl~~hG~~--~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~dl~~~l~~l~-~~~~~~lvGhS 140 (341)
.|||+.||++ .+...+..+.+.+.+..++-+..+. .|-+.. ..- ..+.++++.+.+.+.... ..+-++++|+|
T Consensus 27 ~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~--~s~~~~~~~Qv~~vce~l~~~~~L~~G~naIGfS 103 (306)
T PLN02606 27 VPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQ--DSLFMPLRQQASIACEKIKQMKELSEGYNIVAES 103 (306)
T ss_pred CCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcc--cccccCHHHHHHHHHHHHhcchhhcCceEEEEEc
Confidence 5899999999 5555666666666322244344443 222211 111 144555555555554321 12469999999
Q ss_pred cChHHHHHHHhhccc--cccceeeeccc
Q 038973 141 MGAYPVYGCLKYIPQ--RLAGASLVVPF 166 (341)
Q Consensus 141 ~Gg~~a~~~a~~~p~--~v~~~il~~~~ 166 (341)
.||.++-.++++.|+ .|+.+|.+++.
T Consensus 104 QGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 104 QGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred chhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 999999999999887 59999999875
No 180
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=97.97 E-value=0.00062 Score=56.17 Aligned_cols=102 Identities=19% Similarity=0.282 Sum_probs=78.8
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCC----CCccchHHHHHHHHHHhCC--CCcEEE
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPL----RTVKTEACDVEQLADKLQI--GSKFYV 136 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~----~~~~~~~~dl~~~l~~l~~--~~~~~l 136 (341)
.+|+|+..-|++.+..-...=...|.+. +-+.+++|-+|.|.+.+. -++.+-+.|...+++.++. ..+.+-
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Lld~---NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWIS 138 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLLDG---NQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWIS 138 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhhcc---ceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCcee
Confidence 4689999999987654443223344443 389999999999986553 2888899998888877742 368899
Q ss_pred EEeccChHHHHHHHhhccccccceeeecccc
Q 038973 137 IGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 137 vGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
-|-|=||+.++.+=..||+-|++.|...++.
T Consensus 139 TG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 139 TGGSKGGMTAVYYRRFYPDDVDGTVAYVAPN 169 (448)
T ss_pred cCcCCCceeEEEEeeeCCCCCCeeeeeeccc
Confidence 9999999999988888999999988776654
No 181
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.93 E-value=5.3e-05 Score=63.80 Aligned_cols=118 Identities=15% Similarity=0.024 Sum_probs=73.4
Q ss_pred EEEEEccCC-CCCCCceEEEEcCCC---CCCCcchhhHHHHHHhcCceEEEEcCCC--CCC---CCCC--C----CCCcc
Q 038973 51 VAYREAGVP-KEEANHKIIIIHGFG---SSKDLNLPVSQELIEELKIYFLSFDRPG--YGE---SDPH--P----LRTVK 115 (341)
Q Consensus 51 l~~~~~g~~-~~~~~~~vl~~hG~~---~~~~~~~~~~~~l~~~~~~~vi~~D~~G--~G~---S~~~--~----~~~~~ 115 (341)
++.-.|.+. +.++.|++|+|||.+ ++......--..|+++.++-|+++++|= .|. |.-. . ...+.
T Consensus 80 L~LNIwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~ 159 (491)
T COG2272 80 LYLNIWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLL 159 (491)
T ss_pred eeEEeeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHH
Confidence 344444444 345679999999986 3333322333577777448899999882 121 1111 1 12334
Q ss_pred chH---HHHHHHHHHhCCC-CcEEEEEeccChHHHHHHHhh--ccccccceeeeccccc
Q 038973 116 TEA---CDVEQLADKLQIG-SKFYVIGISMGAYPVYGCLKY--IPQRLAGASLVVPFVH 168 (341)
Q Consensus 116 ~~~---~dl~~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~~il~~~~~~ 168 (341)
|++ +++.+-|+++|-+ ++|.|+|+|.||+.++.+++. ....++++|+.++...
T Consensus 160 DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 160 DQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 443 4556667777642 689999999999988877664 1236888888888753
No 182
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.86 E-value=1.8e-05 Score=62.29 Aligned_cols=103 Identities=17% Similarity=0.145 Sum_probs=55.9
Q ss_pred CCceEEEEcCCCCCC---CcchhhHHHHHHhc-CceEEEEcCCCCCCC-CCCCC--CCccchHHHHHHHHHHhC-CCCcE
Q 038973 63 ANHKIIIIHGFGSSK---DLNLPVSQELIEEL-KIYFLSFDRPGYGES-DPHPL--RTVKTEACDVEQLADKLQ-IGSKF 134 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~---~~~~~~~~~l~~~~-~~~vi~~D~~G~G~S-~~~~~--~~~~~~~~dl~~~l~~l~-~~~~~ 134 (341)
+..|||+.||++.+. ..+..+...+.+.+ |..|.+++.- -+.+ +.... .+..++++.+.+.++... ..+-+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~ 82 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGF 82 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-E
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcce
Confidence 456899999999753 34555544433333 6667777762 2211 11111 145666666666665421 22469
Q ss_pred EEEEeccChHHHHHHHhhccc-cccceeeeccc
Q 038973 135 YVIGISMGAYPVYGCLKYIPQ-RLAGASLVVPF 166 (341)
Q Consensus 135 ~lvGhS~Gg~~a~~~a~~~p~-~v~~~il~~~~ 166 (341)
+++|+|.||.++-.++.+.|+ .|+.+|.+++.
T Consensus 83 ~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 83 NAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp EEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred eeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 999999999999999999865 69999999875
No 183
>COG0627 Predicted esterase [General function prediction only]
Probab=97.85 E-value=0.0001 Score=59.97 Aligned_cols=107 Identities=16% Similarity=0.093 Sum_probs=69.3
Q ss_pred CCCceEEEEcCCCCCCCcch--hhHHHHHHhcCceEEEEcCC--------------CCCCCC---CCC-----C-CCccc
Q 038973 62 EANHKIIIIHGFGSSKDLNL--PVSQELIEELKIYFLSFDRP--------------GYGESD---PHP-----L-RTVKT 116 (341)
Q Consensus 62 ~~~~~vl~~hG~~~~~~~~~--~~~~~l~~~~~~~vi~~D~~--------------G~G~S~---~~~-----~-~~~~~ 116 (341)
.+-|+++++||..++...|. .-++...+..++.++++|-. |-+.|= ... . +.+++
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~t 131 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWET 131 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchhH
Confidence 34577888899887754433 33455566668778887432 222221 000 1 33333
Q ss_pred h-HHHHHHHHH-HhCCCC---cEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 117 E-ACDVEQLAD-KLQIGS---KFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 117 ~-~~dl~~~l~-~l~~~~---~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
+ .+++-..++ ++.... +..++||||||.=|+.+|.++|++++.+...++...
T Consensus 132 fl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~ 188 (316)
T COG0627 132 FLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILS 188 (316)
T ss_pred HHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccc
Confidence 3 345554444 443222 789999999999999999999999999999998865
No 184
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.84 E-value=0.00014 Score=60.22 Aligned_cols=58 Identities=24% Similarity=0.231 Sum_probs=46.7
Q ss_pred CCCCccEEEEEeecCCCCChHHHHHHHhhCCC-cEEEEecCCCcccccCHHHHHHHHHHHh
Q 038973 280 PDNEGSVHIWQGCEDRIIPSQINQFISEKLPW-IQYHEVPDAGHLFIFERKFCEAIIRALL 339 (341)
Q Consensus 280 ~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~gH~~~~ep~~~~~~i~~fl 339 (341)
.++++|.++|.|..|.++.+.....+.+.+|+ ..+..+|+++|.... ..+.+.+..|+
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~--~~~~~~l~~f~ 317 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG--SDVVQSLRAFY 317 (367)
T ss_pred HhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch--HHHHHHHHHHH
Confidence 34566799999999999999999999999986 578999999998876 44444455554
No 185
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.82 E-value=0.00024 Score=56.64 Aligned_cols=98 Identities=13% Similarity=0.154 Sum_probs=64.0
Q ss_pred ceEEEEcCCCCCCC--cchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCC--CccchHHHHHHHHHHhC-CCCcEEEEEe
Q 038973 65 HKIIIIHGFGSSKD--LNLPVSQELIEELKIYFLSFDRPGYGESDPHPLR--TVKTEACDVEQLADKLQ-IGSKFYVIGI 139 (341)
Q Consensus 65 ~~vl~~hG~~~~~~--~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~--~~~~~~~dl~~~l~~l~-~~~~~~lvGh 139 (341)
.|+|+.||+|.+.. ....+.+.+.+.-|..+.++.. |.+. ...+ .+.++++.+.+.+.... ..+-++++|+
T Consensus 26 ~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~-~~s~~~~~~~Qve~vce~l~~~~~l~~G~naIGf 101 (314)
T PLN02633 26 VPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGV-GDSWLMPLTQQAEIACEKVKQMKELSQGYNIVGR 101 (314)
T ss_pred CCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCc-cccceeCHHHHHHHHHHHHhhchhhhCcEEEEEE
Confidence 58999999987643 3334434342222555666554 3332 1222 55666666655554421 1246999999
Q ss_pred ccChHHHHHHHhhccc--cccceeeeccc
Q 038973 140 SMGAYPVYGCLKYIPQ--RLAGASLVVPF 166 (341)
Q Consensus 140 S~Gg~~a~~~a~~~p~--~v~~~il~~~~ 166 (341)
|.||.++-.++++.|+ .|+.+|.+++.
T Consensus 102 SQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 102 SQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred ccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 9999999999999987 59999999875
No 186
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.80 E-value=0.00022 Score=60.03 Aligned_cols=107 Identities=15% Similarity=0.139 Sum_probs=83.8
Q ss_pred CCCceEEEEcCCCCCCCcch----hhHHHHHHhcCceEEEEcCCCCCCCCCCCCC--------CccchHHHHHHHHHHhC
Q 038973 62 EANHKIIIIHGFGSSKDLNL----PVSQELIEELKIYFLSFDRPGYGESDPHPLR--------TVKTEACDVEQLADKLQ 129 (341)
Q Consensus 62 ~~~~~vl~~hG~~~~~~~~~----~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~--------~~~~~~~dl~~~l~~l~ 129 (341)
+.+|..|+|-|=+.-...|- .....+++++|-.|+..++|-+|.|.+.... +..+...|+..+|++++
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n 163 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMN 163 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHH
Confidence 35677778877665555553 3456778888999999999999998654421 66778889999998874
Q ss_pred C------CCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 130 I------GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 130 ~------~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
. +.+.+.+|-|+-|.++.++=.++|+.+.+-|.-++++.
T Consensus 164 ~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~ 208 (514)
T KOG2182|consen 164 AKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVL 208 (514)
T ss_pred hhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeeccccccee
Confidence 3 13899999999999999999999999998888777653
No 187
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.80 E-value=0.0009 Score=52.98 Aligned_cols=120 Identities=14% Similarity=0.049 Sum_probs=68.3
Q ss_pred CCcEEEEEEccCCCCCCCceEEEEcCCC--CCCCcchhhHHHHHHhc---CceEEEEcCCCCC---CCCCCCCCCccchH
Q 038973 47 DGRHVAYREAGVPKEEANHKIIIIHGFG--SSKDLNLPVSQELIEEL---KIYFLSFDRPGYG---ESDPHPLRTVKTEA 118 (341)
Q Consensus 47 ~g~~l~~~~~g~~~~~~~~~vl~~hG~~--~~~~~~~~~~~~l~~~~---~~~vi~~D~~G~G---~S~~~~~~~~~~~~ 118 (341)
+-..+.|...|.....+-|.+++.||-. .+...+ .+++.+..+. .-.++.+|.--.- ..-.......+.++
T Consensus 81 ~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~-~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~ 159 (299)
T COG2382 81 ERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIP-RILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLA 159 (299)
T ss_pred ceeEEEEeCCCCCccccccEEEEeccHHHHhcCChH-HHHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHH
Confidence 3444555555554445678899999853 223333 3445555442 2335555543100 00000011233333
Q ss_pred HHHHHHHHHh----CCCCcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 119 CDVEQLADKL----QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 119 ~dl~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
++|.=.++.. .....-+|.|.|+||.+++..+..+|+++..++.-+|..
T Consensus 160 ~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 160 QELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred HHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 3333333322 112567999999999999999999999999999888864
No 188
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.74 E-value=0.0014 Score=51.30 Aligned_cols=103 Identities=12% Similarity=0.019 Sum_probs=73.0
Q ss_pred CCCceEEEEcCCCCC-CCcchhhHHHHHHhcCceEEEEcCCCCCCCC-CCCCCCccchHHHHHHHHHHhCCCCcEEEEEe
Q 038973 62 EANHKIIIIHGFGSS-KDLNLPVSQELIEELKIYFLSFDRPGYGESD-PHPLRTVKTEACDVEQLADKLQIGSKFYVIGI 139 (341)
Q Consensus 62 ~~~~~vl~~hG~~~~-~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~-~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGh 139 (341)
...|.||++-...++ +...+..++.|....+ |+.-|+-..-.-. ....++++++.+-+.+.+.++|. .+++++.
T Consensus 101 ~pdPkvLivapmsGH~aTLLR~TV~alLp~~~--vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp--~~hv~aV 176 (415)
T COG4553 101 KPDPKVLIVAPMSGHYATLLRGTVEALLPYHD--VYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGP--DAHVMAV 176 (415)
T ss_pred CCCCeEEEEecccccHHHHHHHHHHHhccccc--eeEeeccccceeecccCCccHHHHHHHHHHHHHHhCC--CCcEEEE
Confidence 345678888777665 4444566777776545 9999987543322 12246899999999999999996 4899999
Q ss_pred ccChHHHHH-----HHhhccccccceeeeccccc
Q 038973 140 SMGAYPVYG-----CLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 140 S~Gg~~a~~-----~a~~~p~~v~~~il~~~~~~ 168 (341)
+.-+.-.+. -+...|..-.++++++++++
T Consensus 177 CQP~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 177 CQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred ecCCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 987754433 33345767889999998865
No 189
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.73 E-value=0.00017 Score=55.56 Aligned_cols=98 Identities=15% Similarity=0.175 Sum_probs=68.7
Q ss_pred ceEEEEcCCCCCCCc--chhhHHHHHHhcCceEEEEcCCCCC--CCCCCCCCCccchHHHHHHHHHHhC-CCCcEEEEEe
Q 038973 65 HKIIIIHGFGSSKDL--NLPVSQELIEELKIYFLSFDRPGYG--ESDPHPLRTVKTEACDVEQLADKLQ-IGSKFYVIGI 139 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~--~~~~~~~l~~~~~~~vi~~D~~G~G--~S~~~~~~~~~~~~~dl~~~l~~l~-~~~~~~lvGh 139 (341)
.|+|++||++.+... ...+.+.+.+.-|..|++.|. |-| .|. -..+.++++...+.++... ..+-+.++|.
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~---l~pl~~Qv~~~ce~v~~m~~lsqGynivg~ 99 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSS---LMPLWEQVDVACEKVKQMPELSQGYNIVGY 99 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhh---hccHHHHHHHHHHHHhcchhccCceEEEEE
Confidence 589999999987766 667766666655778888887 333 221 1245566665555555331 2256999999
Q ss_pred ccChHHHHHHHhhccc-cccceeeeccc
Q 038973 140 SMGAYPVYGCLKYIPQ-RLAGASLVVPF 166 (341)
Q Consensus 140 S~Gg~~a~~~a~~~p~-~v~~~il~~~~ 166 (341)
|.||.++-.++...++ .|+.+|.++++
T Consensus 100 SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 100 SQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred ccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 9999999888877654 58888888864
No 190
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.72 E-value=0.00024 Score=63.71 Aligned_cols=123 Identities=13% Similarity=-0.019 Sum_probs=64.4
Q ss_pred ccCCcEEEEEEccCCCCC-CCceEEEEcCCCCCCCc---chhhHHHHHHhcCceEEEEcCC----CCCCCC---CC-CCC
Q 038973 45 LSDGRHVAYREAGVPKEE-ANHKIIIIHGFGSSKDL---NLPVSQELIEELKIYFLSFDRP----GYGESD---PH-PLR 112 (341)
Q Consensus 45 ~~~g~~l~~~~~g~~~~~-~~~~vl~~hG~~~~~~~---~~~~~~~l~~~~~~~vi~~D~~----G~G~S~---~~-~~~ 112 (341)
.+|-..|....=...... ..|++|+|||.+..... .......+....++-||++++| |+-.+. .+ ..+
T Consensus 105 sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~ 184 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNY 184 (535)
T ss_dssp ES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTH
T ss_pred CchHHHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhh
Confidence 335555555443222211 45999999998643211 2222234444449999999998 333222 12 233
Q ss_pred CccchHH---HHHHHHHHhCC-CCcEEEEEeccChHHHHHHHhh--ccccccceeeecccc
Q 038973 113 TVKTEAC---DVEQLADKLQI-GSKFYVIGISMGAYPVYGCLKY--IPQRLAGASLVVPFV 167 (341)
Q Consensus 113 ~~~~~~~---dl~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~~il~~~~~ 167 (341)
.+.|+.. ++.+-|..+|- .++|.|+|||.||..+...+.. ....++++|+.++..
T Consensus 185 Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 185 GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 4555544 34444455543 2689999999999877655543 234799999999854
No 191
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.61 E-value=0.00063 Score=50.53 Aligned_cols=103 Identities=14% Similarity=0.236 Sum_probs=62.6
Q ss_pred CCceEEEEcCCCCC-CCcch---------------hhHHHHHHhcCceEEEEcCCC---CCCCCCCCCCCccchHHHHH-
Q 038973 63 ANHKIIIIHGFGSS-KDLNL---------------PVSQELIEELKIYFLSFDRPG---YGESDPHPLRTVKTEACDVE- 122 (341)
Q Consensus 63 ~~~~vl~~hG~~~~-~~~~~---------------~~~~~l~~~~~~~vi~~D~~G---~G~S~~~~~~~~~~~~~dl~- 122 (341)
++..+|+|||.|.- +..|. +.+.+..+. ||.|+..+.-- +-.+...+...+..-++...
T Consensus 100 ~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~-Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 100 PQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAE-GYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred ccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHc-CCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 34689999998853 45554 333443333 88888887531 11121111111222233333
Q ss_pred ---HHHHHhCCCCcEEEEEeccChHHHHHHHhhccc--cccceeeecccc
Q 038973 123 ---QLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQ--RLAGASLVVPFV 167 (341)
Q Consensus 123 ---~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~~il~~~~~ 167 (341)
.++..... ..+.++.||.||...+.+..++|+ +|.++.+.+++.
T Consensus 179 vw~~~v~pa~~-~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~ 227 (297)
T KOG3967|consen 179 VWKNIVLPAKA-ESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAM 227 (297)
T ss_pred HHHHHhcccCc-ceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccc
Confidence 23333355 789999999999999999999875 677777777653
No 192
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.54 E-value=0.0023 Score=47.29 Aligned_cols=115 Identities=20% Similarity=0.174 Sum_probs=66.8
Q ss_pred EEEEccCCCCCCCceEEEEcCCCCCCCcchh--------hHHHHHHh---c--CceEEEEcCCCCCCC-----CCCCCCC
Q 038973 52 AYREAGVPKEEANHKIIIIHGFGSSKDLNLP--------VSQELIEE---L--KIYFLSFDRPGYGES-----DPHPLRT 113 (341)
Q Consensus 52 ~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~--------~~~~l~~~---~--~~~vi~~D~~G~G~S-----~~~~~~~ 113 (341)
.....|.+. ....+.++++|.+.+...... +...+... . +-.|-.+-+.|+--- +......
T Consensus 8 aava~GD~d-~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~ 86 (177)
T PF06259_consen 8 AAVAVGDPD-TADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGY 86 (177)
T ss_pred EEEEECCcC-CcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchH
Confidence 344556644 356788999999877543221 11111111 0 112333333333211 1111112
Q ss_pred ccchHHHHHHHHHHhC----CCCcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 114 VKTEACDVEQLADKLQ----IGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 114 ~~~~~~dl~~~l~~l~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
-++-+.+|..+++.|. .+.++.++|||+|+.++-..+...+..++.+|+++++.
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 3444566777776653 33589999999999999887777677899999998754
No 193
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=97.54 E-value=0.00012 Score=43.62 Aligned_cols=47 Identities=17% Similarity=0.273 Sum_probs=28.3
Q ss_pred CCCCCCCceEccCCcEEEEEEccCC-----CCCCCceEEEEcCCCCCCCcch
Q 038973 35 GPPVTSPRIKLSDGRHVAYREAGVP-----KEEANHKIIIIHGFGSSKDLNL 81 (341)
Q Consensus 35 ~~~~~~~~~~~~~g~~l~~~~~g~~-----~~~~~~~vl~~hG~~~~~~~~~ 81 (341)
+-+.+++.+++.||..+.....-.+ ....+|+|++.||+.+++..|-
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 3456888999999999887766332 2345789999999999999884
No 194
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.53 E-value=0.002 Score=56.07 Aligned_cols=127 Identities=17% Similarity=0.144 Sum_probs=79.3
Q ss_pred CCceEccCCcEEEEEE---ccCCCCCCCceEEEEcCCCCC--CCcchhhHHHHHHhcCceEEEEcCCCCCCCCC---CC-
Q 038973 40 SPRIKLSDGRHVAYRE---AGVPKEEANHKIIIIHGFGSS--KDLNLPVSQELIEELKIYFLSFDRPGYGESDP---HP- 110 (341)
Q Consensus 40 ~~~~~~~~g~~l~~~~---~g~~~~~~~~~vl~~hG~~~~--~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~---~~- 110 (341)
...+...||..+--.. .......++|.+|..+|.-+- .-.|..--..|.+ .|+-....|.||-|+-.. ..
T Consensus 443 r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld-~G~Vla~a~VRGGGe~G~~WHk~G 521 (712)
T KOG2237|consen 443 RIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLD-RGWVLAYANVRGGGEYGEQWHKDG 521 (712)
T ss_pred EEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEe-cceEEEEEeeccCcccccchhhcc
Confidence 3445556776543221 112222356777777765432 2233322223444 477777789999876542 11
Q ss_pred -----CCCccchHHHHHHHHHHh--CCCCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 111 -----LRTVKTEACDVEQLADKL--QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 111 -----~~~~~~~~~dl~~~l~~l--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
..+++++..-.+-+++.= .. ++..+.|.|.||.++..++.++|+.+.++|+-.|+.+
T Consensus 522 ~lakKqN~f~Dfia~AeyLve~gyt~~-~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmD 585 (712)
T KOG2237|consen 522 RLAKKQNSFDDFIACAEYLVENGYTQP-SKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMD 585 (712)
T ss_pred chhhhcccHHHHHHHHHHHHHcCCCCc-cceeEecccCccchhHHHhccCchHhhhhhhcCccee
Confidence 125666666555555431 23 6899999999999999999999999999999888754
No 195
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.39 E-value=0.015 Score=51.22 Aligned_cols=125 Identities=17% Similarity=0.118 Sum_probs=80.7
Q ss_pred eEccCCcEEEEEEcc---CCCCCCCceEEEEcCCCCC--CCcchhhHHHHHHhcCceEEEEcCCCCCCCCCC--------
Q 038973 43 IKLSDGRHVAYREAG---VPKEEANHKIIIIHGFGSS--KDLNLPVSQELIEELKIYFLSFDRPGYGESDPH-------- 109 (341)
Q Consensus 43 ~~~~~g~~l~~~~~g---~~~~~~~~~vl~~hG~~~~--~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~-------- 109 (341)
++..||.++-....- -..+.+.|.+|..-|.-+. ...|....-.|.++ |+-.-....||-|+=...
T Consensus 424 a~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDR-GfiyAIAHVRGGgelG~~WYe~GK~l 502 (682)
T COG1770 424 ATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDR-GFVYAIAHVRGGGELGRAWYEDGKLL 502 (682)
T ss_pred EEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecC-ceEEEEEEeecccccChHHHHhhhhh
Confidence 444578765543321 1122345666666664332 22233333355665 876566677876654321
Q ss_pred -CCCCccchHHHHHHHHHHh-CCCCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 110 -PLRTVKTEACDVEQLADKL-QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 110 -~~~~~~~~~~dl~~~l~~l-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
...++.|+.+-...+++.= .-.+.++++|-|.||++.-..+...|+.++++|+-.|+++
T Consensus 503 ~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 503 NKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred hccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 1247888887777776642 2236899999999999999999999999999999998875
No 196
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.33 E-value=0.0052 Score=48.09 Aligned_cols=36 Identities=25% Similarity=0.325 Sum_probs=33.8
Q ss_pred CcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 132 SKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 132 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
++..++|||+||.+++.....+|+.+...++++|..
T Consensus 137 ~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 137 ERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred ccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 579999999999999999999999999999999975
No 197
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.28 E-value=0.00052 Score=50.15 Aligned_cols=52 Identities=21% Similarity=-0.024 Sum_probs=36.0
Q ss_pred chHHHHHHHHHHhC---CCCcEEEEEeccChHHHHHHHhhccc----cccceeeecccc
Q 038973 116 TEACDVEQLADKLQ---IGSKFYVIGISMGAYPVYGCLKYIPQ----RLAGASLVVPFV 167 (341)
Q Consensus 116 ~~~~dl~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~p~----~v~~~il~~~~~ 167 (341)
.+.+.+...++... .+.+++++|||+||.+|..++..... +...++..+++.
T Consensus 9 ~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 9 SLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 34444555554431 23799999999999999998877654 566677777653
No 198
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.23 E-value=0.062 Score=41.79 Aligned_cols=94 Identities=16% Similarity=0.017 Sum_probs=59.0
Q ss_pred CCceEEEEcCCCC---CCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHH----HHHHHHh----CC-
Q 038973 63 ANHKIIIIHGFGS---SKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDV----EQLADKL----QI- 130 (341)
Q Consensus 63 ~~~~vl~~hG~~~---~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl----~~~l~~l----~~- 130 (341)
++..|-|+-|..- ..-.|+.+.+.|+++ ||.|++.-+.- ..+....|..+ ...++.+ +.
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~-Gy~ViAtPy~~--------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~ 86 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADR-GYAVIATPYVV--------TFDHQAIAREVWERFERCLRALQKRGGLD 86 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhC-CcEEEEEecCC--------CCcHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3446667766532 234678899999987 99999986641 12222333322 2222222 22
Q ss_pred --CCcEEEEEeccChHHHHHHHhhccccccceeeecc
Q 038973 131 --GSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVP 165 (341)
Q Consensus 131 --~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~ 165 (341)
.-+++-+|||+|+-+-+.+...++..-++-++++-
T Consensus 87 ~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 87 PAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred cccCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 13678899999999988888777655577777764
No 199
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=97.09 E-value=0.0005 Score=57.65 Aligned_cols=87 Identities=13% Similarity=-0.019 Sum_probs=54.3
Q ss_pred cchhhHHHHHHhcCce------EEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhh
Q 038973 79 LNLPVSQELIEELKIY------FLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKY 152 (341)
Q Consensus 79 ~~~~~~~~l~~~~~~~------vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 152 (341)
.|..+++.|..- ||. -..+|+|=.-......+..+..+..-|+...+.-|- +|++||+||||+.+.+.+...
T Consensus 125 ~w~~~i~~lv~~-GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~-kkVvlisHSMG~l~~lyFl~w 202 (473)
T KOG2369|consen 125 YWHELIENLVGI-GYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGG-KKVVLISHSMGGLYVLYFLKW 202 (473)
T ss_pred HHHHHHHHHHhh-CcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCC-CceEEEecCCccHHHHHHHhc
Confidence 566777777654 665 345777631111111112333444444444444454 899999999999999999988
Q ss_pred ccc--------cccceeeecccc
Q 038973 153 IPQ--------RLAGASLVVPFV 167 (341)
Q Consensus 153 ~p~--------~v~~~il~~~~~ 167 (341)
+++ .|++++-++++.
T Consensus 203 ~~~~~~~W~~k~I~sfvnig~p~ 225 (473)
T KOG2369|consen 203 VEAEGPAWCDKYIKSFVNIGAPW 225 (473)
T ss_pred ccccchhHHHHHHHHHHccCchh
Confidence 776 477777777653
No 200
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.08 E-value=0.0009 Score=58.19 Aligned_cols=84 Identities=11% Similarity=0.055 Sum_probs=53.3
Q ss_pred cchhhHHHHHHhcCce-----EEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHh---CCCCcEEEEEeccChHHHHHHH
Q 038973 79 LNLPVSQELIEELKIY-----FLSFDRPGYGESDPHPLRTVKTEACDVEQLADKL---QIGSKFYVIGISMGAYPVYGCL 150 (341)
Q Consensus 79 ~~~~~~~~l~~~~~~~-----vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a 150 (341)
.|..+++.|.+. ||. ...+|+|=.. .....-+++...+...++.. +-++|++|+||||||.+++.+.
T Consensus 157 vw~kLIe~L~~i-GY~~~nL~gAPYDWRls~----~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL 231 (642)
T PLN02517 157 VWAVLIANLARI-GYEEKNMYMAAYDWRLSF----QNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFM 231 (642)
T ss_pred eHHHHHHHHHHc-CCCCCceeecccccccCc----cchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHH
Confidence 457888888865 775 2334444110 00112245555566666543 3237999999999999999876
Q ss_pred hhc---------------cccccceeeecccc
Q 038973 151 KYI---------------PQRLAGASLVVPFV 167 (341)
Q Consensus 151 ~~~---------------p~~v~~~il~~~~~ 167 (341)
... ...|++.|.++++.
T Consensus 232 ~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 232 KWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HhccccccccCCcchHHHHHHHHHheeccccc
Confidence 532 12589999998864
No 201
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.07 E-value=0.00084 Score=48.19 Aligned_cols=37 Identities=14% Similarity=0.080 Sum_probs=27.4
Q ss_pred chHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhc
Q 038973 116 TEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYI 153 (341)
Q Consensus 116 ~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 153 (341)
+..+.+..+++.... .++++.|||+||.+|..++...
T Consensus 49 ~~~~~l~~~~~~~~~-~~i~itGHSLGGalA~l~a~~l 85 (140)
T PF01764_consen 49 QILDALKELVEKYPD-YSIVITGHSLGGALASLAAADL 85 (140)
T ss_dssp HHHHHHHHHHHHSTT-SEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccC-ccchhhccchHHHHHHHHHHhh
Confidence 344555565555554 7899999999999999888653
No 202
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.99 E-value=0.0039 Score=53.09 Aligned_cols=116 Identities=13% Similarity=0.078 Sum_probs=73.6
Q ss_pred EEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHH-------------------HHHhcCceEEEEc-CCCCCCCCCCC
Q 038973 51 VAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQE-------------------LIEELKIYFLSFD-RPGYGESDPHP 110 (341)
Q Consensus 51 l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~-------------------l~~~~~~~vi~~D-~~G~G~S~~~~ 110 (341)
+.|...++..+.++|.++.+.|.+|++..|..+.+- +... -.++-+| .-|.|.|....
T Consensus 88 ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~--adLvFiDqPvGTGfS~a~~ 165 (498)
T COG2939 88 FFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF--ADLVFIDQPVGTGFSRALG 165 (498)
T ss_pred EEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC--CceEEEecCcccCcccccc
Confidence 334444443345689999999999998887644210 1111 2488999 66999987422
Q ss_pred ---CCCccchHHHHHHHHHHh--------CCCCcEEEEEeccChHHHHHHHhhccc---cccceeeeccccc
Q 038973 111 ---LRTVKTEACDVEQLADKL--------QIGSKFYVIGISMGAYPVYGCLKYIPQ---RLAGASLVVPFVH 168 (341)
Q Consensus 111 ---~~~~~~~~~dl~~~l~~l--------~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~~il~~~~~~ 168 (341)
..+.....+|+..+.+.+ +...+.+|+|-|+||.-+-.+|..--+ ..++++.+.+...
T Consensus 166 ~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvli 237 (498)
T COG2939 166 DEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLI 237 (498)
T ss_pred cccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeee
Confidence 125666666766665543 222589999999999988777754323 3556666655443
No 203
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.72 E-value=0.0023 Score=43.30 Aligned_cols=40 Identities=20% Similarity=0.236 Sum_probs=24.6
Q ss_pred eEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhh
Q 038973 43 IKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPV 83 (341)
Q Consensus 43 ~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~ 83 (341)
.+..+|..||+....+ .+.+..||||+||+++|-..|..+
T Consensus 72 ~t~I~g~~iHFih~rs-~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 72 KTEIDGLDIHFIHVRS-KRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp EEEETTEEEEEEEE---S-TT-EEEEEE--SS--GGGGHHH
T ss_pred eEEEeeEEEEEEEeeC-CCCCCeEEEEECCCCccHHhHHhh
Confidence 3334899999988754 335668999999999998777654
No 204
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.69 E-value=0.0037 Score=48.47 Aligned_cols=46 Identities=20% Similarity=0.131 Sum_probs=34.1
Q ss_pred HHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhc----cccccceeeecccc
Q 038973 120 DVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYI----PQRLAGASLVVPFV 167 (341)
Q Consensus 120 dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~----p~~v~~~il~~~~~ 167 (341)
-+..+++..+ .++.+.|||.||.+|...+... .++|.++...+++.
T Consensus 74 yl~~~~~~~~--~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 74 YLKKIAKKYP--GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHhCC--CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3444444443 4699999999999999888763 35788888888753
No 205
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.69 E-value=0.003 Score=47.77 Aligned_cols=41 Identities=17% Similarity=0.179 Sum_probs=32.8
Q ss_pred CccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhc
Q 038973 113 TVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYI 153 (341)
Q Consensus 113 ~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 153 (341)
...|..+....+|++.+.+++++|+|||.|+.++.++...+
T Consensus 76 ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 44555666677778887778999999999999999998764
No 206
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.57 E-value=0.017 Score=43.29 Aligned_cols=100 Identities=18% Similarity=0.218 Sum_probs=53.5
Q ss_pred ceEEEEcCCCCCCCcc--h-hhHHHHHHhcC---ceEEEEcCCCCCCCCCCCCC--CccchHHHHHHHHHHh---CCCCc
Q 038973 65 HKIIIIHGFGSSKDLN--L-PVSQELIEELK---IYFLSFDRPGYGESDPHPLR--TVKTEACDVEQLADKL---QIGSK 133 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~--~-~~~~~l~~~~~---~~vi~~D~~G~G~S~~~~~~--~~~~~~~dl~~~l~~l---~~~~~ 133 (341)
-.||+..|.+...... . .+...+.+..+ ..+..+++|-..... .| +..+=+.++...++.. ..+.+
T Consensus 6 v~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~---~y~~S~~~G~~~~~~~i~~~~~~CP~~k 82 (179)
T PF01083_consen 6 VHVIFARGTGEPPGVGRVGPPFADALQAQPGGTSVAVQGVEYPASLGPN---SYGDSVAAGVANLVRLIEEYAARCPNTK 82 (179)
T ss_dssp EEEEEE--TTSSTTTCCCHHHHHHHHHHHCTTCEEEEEE--S---SCGG---SCHHHHHHHHHHHHHHHHHHHHHSTTSE
T ss_pred EEEEEecCCCCCCCCccccHHHHHHHHhhcCCCeeEEEecCCCCCCCcc---cccccHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3566677776653321 2 34445554444 345556666432221 11 2222233444444322 34479
Q ss_pred EEEEEeccChHHHHHHHhh------ccccccceeeecccc
Q 038973 134 FYVIGISMGAYPVYGCLKY------IPQRLAGASLVVPFV 167 (341)
Q Consensus 134 ~~lvGhS~Gg~~a~~~a~~------~p~~v~~~il~~~~~ 167 (341)
++|+|+|.|+.++..++.. ..++|.++++++-+.
T Consensus 83 ivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 83 IVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp EEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TT
T ss_pred EEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCc
Confidence 9999999999999988766 346899999988653
No 207
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=96.45 E-value=0.0073 Score=49.12 Aligned_cols=59 Identities=17% Similarity=0.172 Sum_probs=45.7
Q ss_pred CCCCccEEEEEeecCCCCChHHHHHHHhhCCCc-EEEEecCCCcccccCHHHHHHHHHHHhh
Q 038973 280 PDNEGSVHIWQGCEDRIIPSQINQFISEKLPWI-QYHEVPDAGHLFIFERKFCEAIIRALLV 340 (341)
Q Consensus 280 ~~i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~-~~~~~~~~gH~~~~ep~~~~~~i~~fl~ 340 (341)
.++.+|-.++.+..|...+++.+....+.+|+. .+..+|+..|.... ..+.+.+.-|++
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n--~~i~esl~~fln 385 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN--QFIKESLEPFLN 385 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH--HHHHHHHHHHHH
Confidence 455666999999999999999999999999985 58899999998764 444444444443
No 208
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.30 E-value=0.0053 Score=48.27 Aligned_cols=22 Identities=23% Similarity=0.084 Sum_probs=19.2
Q ss_pred CcEEEEEeccChHHHHHHHhhc
Q 038973 132 SKFYVIGISMGAYPVYGCLKYI 153 (341)
Q Consensus 132 ~~~~lvGhS~Gg~~a~~~a~~~ 153 (341)
.++++.|||+||.+|..++...
T Consensus 128 ~~i~vtGHSLGGaiA~l~a~~l 149 (229)
T cd00519 128 YKIIVTGHSLGGALASLLALDL 149 (229)
T ss_pred ceEEEEccCHHHHHHHHHHHHH
Confidence 6899999999999998877653
No 209
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=96.25 E-value=0.12 Score=49.13 Aligned_cols=96 Identities=17% Similarity=0.211 Sum_probs=66.4
Q ss_pred CCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCC--CCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEe
Q 038973 62 EANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGE--SDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGI 139 (341)
Q Consensus 62 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~--S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGh 139 (341)
...|++.|+|..-+.....+.+ +.+ ...|-+|. +...+..++++.+.-...-++.+.+..+..++|+
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~l----a~r-------le~PaYglQ~T~~vP~dSies~A~~yirqirkvQP~GPYrl~GY 2189 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESL----ASR-------LEIPAYGLQCTEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGY 2189 (2376)
T ss_pred ccCCceEEEeccccchHHHHHH----Hhh-------cCCcchhhhccccCCcchHHHHHHHHHHHHHhcCCCCCeeeecc
Confidence 3568999999998776665544 443 22333332 2334445788888776677777766579999999
Q ss_pred ccChHHHHHHHhhcc--ccccceeeeccccc
Q 038973 140 SMGAYPVYGCLKYIP--QRLAGASLVVPFVH 168 (341)
Q Consensus 140 S~Gg~~a~~~a~~~p--~~v~~~il~~~~~~ 168 (341)
|+|+.++..+|..-. +....+|++++...
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 999999999886532 34566999988643
No 210
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.25 E-value=0.018 Score=51.87 Aligned_cols=106 Identities=12% Similarity=0.002 Sum_probs=63.0
Q ss_pred CceEEEEcCCCCC---CCcch-hhHHHHHHhcCceEEEEcCC----CC---CCCCCCCCCCccchHHHH---HHHHHHhC
Q 038973 64 NHKIIIIHGFGSS---KDLNL-PVSQELIEELKIYFLSFDRP----GY---GESDPHPLRTVKTEACDV---EQLADKLQ 129 (341)
Q Consensus 64 ~~~vl~~hG~~~~---~~~~~-~~~~~l~~~~~~~vi~~D~~----G~---G~S~~~~~~~~~~~~~dl---~~~l~~l~ 129 (341)
-|++|++||.+.. ...+. .....+....+.-|+++.+| |+ |.+..+....+.|+...+ .+-|..+|
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 6899999998743 22221 11222333336667778777 22 222233344555555443 44445554
Q ss_pred C-CCcEEEEEeccChHHHHHHHhh--ccccccceeeecccccc
Q 038973 130 I-GSKFYVIGISMGAYPVYGCLKY--IPQRLAGASLVVPFVHY 169 (341)
Q Consensus 130 ~-~~~~~lvGhS~Gg~~a~~~a~~--~p~~v~~~il~~~~~~~ 169 (341)
- .++|.++|||.||..+..+... ....+.++|.+++....
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~ 234 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALS 234 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccccc
Confidence 2 2789999999999998766542 12467788888876543
No 211
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.22 E-value=0.011 Score=41.92 Aligned_cols=78 Identities=19% Similarity=0.228 Sum_probs=51.5
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCce-EEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccCh
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIY-FLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGA 143 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~-vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg 143 (341)
..||++-|++..++....++. .+ ++. ++++|++..... .++. .. +.+-+|++|||-
T Consensus 12 ~LIvyFaGwgtpps~v~HLil---pe-N~dl~lcYDY~dl~ld-----fDfs-------------Ay-~hirlvAwSMGV 68 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLIL---PE-NHDLLLCYDYQDLNLD-----FDFS-------------AY-RHIRLVAWSMGV 68 (214)
T ss_pred EEEEEEecCCCCHHHHhhccC---CC-CCcEEEEeehhhcCcc-----cchh-------------hh-hhhhhhhhhHHH
Confidence 378888999988877654421 22 343 677888643211 1111 12 567899999999
Q ss_pred HHHHHHHhhccccccceeeecccc
Q 038973 144 YPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 144 ~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
.+|-++.... ++++.+.+++..
T Consensus 69 wvAeR~lqg~--~lksatAiNGTg 90 (214)
T COG2830 69 WVAERVLQGI--RLKSATAINGTG 90 (214)
T ss_pred HHHHHHHhhc--cccceeeecCCC
Confidence 9998887765 477778877653
No 212
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.22 E-value=0.01 Score=48.97 Aligned_cols=94 Identities=24% Similarity=0.266 Sum_probs=62.4
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHh----CCCCcEEEEEec
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKL----QIGSKFYVIGIS 140 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l----~~~~~~~lvGhS 140 (341)
..-||+.|=|+-.+.=..+...|.++ |+.|+.+|-.-+=-| ..+.++.++|+..++++. +. .++.|+|+|
T Consensus 261 ~~av~~SGDGGWr~lDk~v~~~l~~~-gvpVvGvdsLRYfW~----~rtPe~~a~Dl~r~i~~y~~~w~~-~~~~liGyS 334 (456)
T COG3946 261 TVAVFYSGDGGWRDLDKEVAEALQKQ-GVPVVGVDSLRYFWS----ERTPEQIAADLSRLIRFYARRWGA-KRVLLIGYS 334 (456)
T ss_pred eEEEEEecCCchhhhhHHHHHHHHHC-CCceeeeehhhhhhc----cCCHHHHHHHHHHHHHHHHHhhCc-ceEEEEeec
Confidence 34566666665444444666777665 999999995433223 347888899998888765 45 799999999
Q ss_pred cChHHHHHHHhhccc----cccceeeec
Q 038973 141 MGAYPVYGCLKYIPQ----RLAGASLVV 164 (341)
Q Consensus 141 ~Gg~~a~~~a~~~p~----~v~~~il~~ 164 (341)
+|+=+.-..-.+-|. +|+-+.+++
T Consensus 335 fGADvlP~~~n~L~~~~r~~v~~~~ll~ 362 (456)
T COG3946 335 FGADVLPFAYNRLPPATRQRVRMVSLLG 362 (456)
T ss_pred ccchhhHHHHHhCCHHHHHHHHHHHHHh
Confidence 999776544333343 454444444
No 213
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.10 E-value=0.3 Score=40.49 Aligned_cols=55 Identities=13% Similarity=0.051 Sum_probs=44.7
Q ss_pred EEEEEeecCCCCChHHHHHHHhhC----CCcEEEEecCCCcccccC--HHHHHHHHHHHhh
Q 038973 286 VHIWQGCEDRIIPSQINQFISEKL----PWIQYHEVPDAGHLFIFE--RKFCEAIIRALLV 340 (341)
Q Consensus 286 vlii~g~~D~~~p~~~~~~~~~~~----~~~~~~~~~~~gH~~~~e--p~~~~~~i~~fl~ 340 (341)
.+.+.+..|.++|.+..+++.+.. -+++..-+.++-|..+.. |..+.+...+|++
T Consensus 228 ~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~ 288 (350)
T KOG2521|consen 228 QLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLR 288 (350)
T ss_pred ceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHH
Confidence 778889999999998887775443 245666777899999886 9999999999986
No 214
>PLN02162 triacylglycerol lipase
Probab=96.07 E-value=0.012 Score=50.11 Aligned_cols=34 Identities=12% Similarity=-0.018 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHh
Q 038973 117 EACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLK 151 (341)
Q Consensus 117 ~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~ 151 (341)
+.+.+.++++.... .++++.|||+||.+|..+|.
T Consensus 264 I~~~L~~lL~k~p~-~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 264 IRQMLRDKLARNKN-LKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHhCCC-ceEEEEecChHHHHHHHHHH
Confidence 33445555555443 68999999999999988754
No 215
>PLN00413 triacylglycerol lipase
Probab=95.94 E-value=0.016 Score=49.42 Aligned_cols=35 Identities=23% Similarity=0.198 Sum_probs=27.0
Q ss_pred chHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHh
Q 038973 116 TEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLK 151 (341)
Q Consensus 116 ~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~ 151 (341)
++.+.+..+++.... .++++.|||+||.+|..++.
T Consensus 269 ~i~~~Lk~ll~~~p~-~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPT-SKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCC-CeEEEEecCHHHHHHHHHHH
Confidence 345566666666544 68999999999999998774
No 216
>PLN02571 triacylglycerol lipase
Probab=95.74 E-value=0.013 Score=49.42 Aligned_cols=37 Identities=19% Similarity=0.078 Sum_probs=26.7
Q ss_pred chHHHHHHHHHHhCC-CCcEEEEEeccChHHHHHHHhh
Q 038973 116 TEACDVEQLADKLQI-GSKFYVIGISMGAYPVYGCLKY 152 (341)
Q Consensus 116 ~~~~dl~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 152 (341)
++.+++..+++.... +.++++.|||+||.+|+..|..
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 445566666665533 1268999999999999987764
No 217
>PLN02454 triacylglycerol lipase
Probab=95.63 E-value=0.016 Score=48.84 Aligned_cols=20 Identities=20% Similarity=0.042 Sum_probs=17.6
Q ss_pred cEEEEEeccChHHHHHHHhh
Q 038973 133 KFYVIGISMGAYPVYGCLKY 152 (341)
Q Consensus 133 ~~~lvGhS~Gg~~a~~~a~~ 152 (341)
++++.|||+||.+|+..|..
T Consensus 229 sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred eEEEEecCHHHHHHHHHHHH
Confidence 49999999999999988754
No 218
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.42 E-value=0.061 Score=44.60 Aligned_cols=59 Identities=14% Similarity=0.143 Sum_probs=46.6
Q ss_pred CccEEEEEeecCCCCChHHHHHHHhhCC------------------------C-cEEEEecCCCcccccCHHHHHHHHHH
Q 038973 283 EGSVHIWQGCEDRIIPSQINQFISEKLP------------------------W-IQYHEVPDAGHLFIFERKFCEAIIRA 337 (341)
Q Consensus 283 ~~Pvlii~g~~D~~~p~~~~~~~~~~~~------------------------~-~~~~~~~~~gH~~~~ep~~~~~~i~~ 337 (341)
.++||+..|+.|.+|+.-..+.+.+.+. + .++.++.|+||+++..|+...+++..
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~~al~m~~~ 312 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 312 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHHHHHHHHHH
Confidence 3679999999999999876666655442 2 46777889999996339999999999
Q ss_pred HhhC
Q 038973 338 LLVR 341 (341)
Q Consensus 338 fl~~ 341 (341)
|+..
T Consensus 313 fi~~ 316 (319)
T PLN02213 313 WISG 316 (319)
T ss_pred HHcC
Confidence 9863
No 219
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.22 E-value=0.05 Score=44.98 Aligned_cols=36 Identities=25% Similarity=0.379 Sum_probs=29.1
Q ss_pred CcEEEEEeccChHHHHHHHhhccc-----cccceeeecccc
Q 038973 132 SKFYVIGISMGAYPVYGCLKYIPQ-----RLAGASLVVPFV 167 (341)
Q Consensus 132 ~~~~lvGhS~Gg~~a~~~a~~~p~-----~v~~~il~~~~~ 167 (341)
.|+.|||||+|+.+...++..-.+ .|+.+++++++.
T Consensus 220 RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 220 RPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPV 260 (345)
T ss_pred CceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCC
Confidence 689999999999998877654333 389999998765
No 220
>PLN02408 phospholipase A1
Probab=95.20 E-value=0.027 Score=46.78 Aligned_cols=35 Identities=14% Similarity=0.029 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhCC-CCcEEEEEeccChHHHHHHHhh
Q 038973 118 ACDVEQLADKLQI-GSKFYVIGISMGAYPVYGCLKY 152 (341)
Q Consensus 118 ~~dl~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 152 (341)
.++|..+++.... ..++++.|||+||.+|...|..
T Consensus 185 l~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 185 REEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3455555555442 1369999999999999987765
No 221
>PLN02310 triacylglycerol lipase
Probab=95.17 E-value=0.026 Score=47.51 Aligned_cols=36 Identities=17% Similarity=0.064 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHhC---CCCcEEEEEeccChHHHHHHHhh
Q 038973 117 EACDVEQLADKLQ---IGSKFYVIGISMGAYPVYGCLKY 152 (341)
Q Consensus 117 ~~~dl~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~ 152 (341)
+.+.+..+++... .+.++++.|||+||.+|+..|..
T Consensus 191 Vl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 4455666665542 22479999999999999887753
No 222
>PLN02934 triacylglycerol lipase
Probab=94.94 E-value=0.034 Score=47.89 Aligned_cols=34 Identities=21% Similarity=0.194 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHh
Q 038973 117 EACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLK 151 (341)
Q Consensus 117 ~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~ 151 (341)
..+.+..+++.... .++++.|||+||.+|..++.
T Consensus 307 v~~~lk~ll~~~p~-~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLKEHKN-AKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHCCC-CeEEEeccccHHHHHHHHHH
Confidence 44556666665544 69999999999999998864
No 223
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.83 E-value=0.03 Score=40.41 Aligned_cols=114 Identities=15% Similarity=0.151 Sum_probs=64.6
Q ss_pred CcEEEEEEccCCCCCCCceEEEEcCCCCCCCcch--hhHHHHH---HhcCceEEEEcCCCCCCCCCCC-CCCccchHH--
Q 038973 48 GRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNL--PVSQELI---EELKIYFLSFDRPGYGESDPHP-LRTVKTEAC-- 119 (341)
Q Consensus 48 g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~--~~~~~l~---~~~~~~vi~~D~~G~G~S~~~~-~~~~~~~~~-- 119 (341)
+..+.+..+|.. +.+||.++-.++.-..|. ..+..|+ ++-....++++ |-..-+.-. ..+..+.++
T Consensus 14 ~RdMel~ryGHa----G~pVvvFpts~Grf~eyed~G~v~ala~fie~G~vQlft~~--gldsESf~a~h~~~adr~~rH 87 (227)
T COG4947 14 NRDMELNRYGHA----GIPVVVFPTSGGRFNEYEDFGMVDALASFIEEGLVQLFTLS--GLDSESFLATHKNAADRAERH 87 (227)
T ss_pred cchhhhhhccCC----CCcEEEEecCCCcchhhhhcccHHHHHHHHhcCcEEEEEec--ccchHhHhhhcCCHHHHHHHH
Confidence 456777777764 345666665555544444 2333333 33122344433 332211100 011222221
Q ss_pred -HHH-HHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 120 -DVE-QLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 120 -dl~-~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
..+ -+++..-+ .+..+-|-||||..|..+.-++|+.+.++|.+++..+
T Consensus 88 ~AyerYv~eEalp-gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYd 137 (227)
T COG4947 88 RAYERYVIEEALP-GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYD 137 (227)
T ss_pred HHHHHHHHHhhcC-CCccccccchhhhhhhhhheeChhHhhhheeecceee
Confidence 122 23333333 4678899999999999999999999999999998753
No 224
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.75 E-value=0.045 Score=45.54 Aligned_cols=82 Identities=13% Similarity=0.112 Sum_probs=48.2
Q ss_pred CCceEEEEcCCCC-CCCcchhhHHHHHHhc-CceEEEEcCCCCCCCC-CCC---CCCccchHHHHHHHHHHhCCCCcEEE
Q 038973 63 ANHKIIIIHGFGS-SKDLNLPVSQELIEEL-KIYFLSFDRPGYGESD-PHP---LRTVKTEACDVEQLADKLQIGSKFYV 136 (341)
Q Consensus 63 ~~~~vl~~hG~~~-~~~~~~~~~~~l~~~~-~~~vi~~D~~G~G~S~-~~~---~~~~~~~~~dl~~~l~~l~~~~~~~l 136 (341)
++-.+|+.||+-+ +...|...+.....+. +. ....+|+-... ... ..--...++++.+.+....+ .++.+
T Consensus 79 ~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~---~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si-~kISf 154 (405)
T KOG4372|consen 79 PKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDK---LIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSI-EKISF 154 (405)
T ss_pred CceEEEeccccccccHHHHHHHHHhhhcCCCcc---eEeeeccccchhhccccceeeecccHHHHhhhhhcccc-ceeee
Confidence 3457899999987 5666776666665543 22 22233322211 111 11223445555555555556 79999
Q ss_pred EEeccChHHHHH
Q 038973 137 IGISMGAYPVYG 148 (341)
Q Consensus 137 vGhS~Gg~~a~~ 148 (341)
+|||+||.++-.
T Consensus 155 vghSLGGLvar~ 166 (405)
T KOG4372|consen 155 VGHSLGGLVARY 166 (405)
T ss_pred eeeecCCeeeeE
Confidence 999999988754
No 225
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.56 E-value=0.043 Score=47.44 Aligned_cols=36 Identities=14% Similarity=0.075 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHhC---CCCcEEEEEeccChHHHHHHHhh
Q 038973 117 EACDVEQLADKLQ---IGSKFYVIGISMGAYPVYGCLKY 152 (341)
Q Consensus 117 ~~~dl~~~l~~l~---~~~~~~lvGhS~Gg~~a~~~a~~ 152 (341)
..++|..+++... .+.++++.|||+||.+|+..|..
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 4456666666543 22479999999999999887753
No 226
>PLN02324 triacylglycerol lipase
Probab=94.43 E-value=0.049 Score=45.90 Aligned_cols=35 Identities=14% Similarity=0.072 Sum_probs=24.7
Q ss_pred HHHHHHHHHHhCC-CCcEEEEEeccChHHHHHHHhh
Q 038973 118 ACDVEQLADKLQI-GSKFYVIGISMGAYPVYGCLKY 152 (341)
Q Consensus 118 ~~dl~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 152 (341)
.++|..+++...- +.++++.|||+||.+|+..|..
T Consensus 200 l~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 200 QGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 3445556655432 1369999999999999988753
No 227
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=94.40 E-value=0.64 Score=37.62 Aligned_cols=125 Identities=16% Similarity=0.166 Sum_probs=78.9
Q ss_pred CceEccCCcEEEEEEccC--CCCCCCceEEEEcCCCCCCCcchhhHHHH--------------HHhcCceEEEEcCC-CC
Q 038973 41 PRIKLSDGRHVAYREAGV--PKEEANHKIIIIHGFGSSKDLNLPVSQEL--------------IEELKIYFLSFDRP-GY 103 (341)
Q Consensus 41 ~~~~~~~g~~l~~~~~g~--~~~~~~~~vl~~hG~~~~~~~~~~~~~~l--------------~~~~~~~vi~~D~~-G~ 103 (341)
.++.+.++..+.+..+-. .....+|..+.+.|.++.+..=..-++++ .+. ..++.+|-| |.
T Consensus 6 g~v~vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGa 83 (414)
T KOG1283|consen 6 GYVDVRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGA 83 (414)
T ss_pred cceeeecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcC
Confidence 345666777777655422 12234677888888876543311111111 122 237778865 88
Q ss_pred CCCC--CCCCC--CccchHHHHHHHHHHh-------CCCCcEEEEEeccChHHHHHHHhhcc---------ccccceeee
Q 038973 104 GESD--PHPLR--TVKTEACDVEQLADKL-------QIGSKFYVIGISMGAYPVYGCLKYIP---------QRLAGASLV 163 (341)
Q Consensus 104 G~S~--~~~~~--~~~~~~~dl~~~l~~l-------~~~~~~~lvGhS~Gg~~a~~~a~~~p---------~~v~~~il~ 163 (341)
|.|- ....| +..+.+.|+.++++.+ +- .+++++-.|.||-++..++...- ..+.+++|-
T Consensus 84 GfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t-~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLG 162 (414)
T KOG1283|consen 84 GFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKT-VPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALG 162 (414)
T ss_pred ceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccc-cceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEcc
Confidence 8774 22333 6788899999999876 22 68999999999999888775322 246677777
Q ss_pred ccccc
Q 038973 164 VPFVH 168 (341)
Q Consensus 164 ~~~~~ 168 (341)
++.+.
T Consensus 163 DSWIS 167 (414)
T KOG1283|consen 163 DSWIS 167 (414)
T ss_pred CcccC
Confidence 77654
No 228
>PLN02802 triacylglycerol lipase
Probab=94.30 E-value=0.059 Score=46.52 Aligned_cols=35 Identities=23% Similarity=0.170 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhCC-CCcEEEEEeccChHHHHHHHhh
Q 038973 118 ACDVEQLADKLQI-GSKFYVIGISMGAYPVYGCLKY 152 (341)
Q Consensus 118 ~~dl~~~l~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 152 (341)
.+++..+++...- +.++++.|||+||.+|+..|..
T Consensus 315 l~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 315 VGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 3445555554432 1378999999999999987754
No 229
>PLN02753 triacylglycerol lipase
Probab=94.21 E-value=0.059 Score=46.73 Aligned_cols=34 Identities=18% Similarity=0.122 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhCC----CCcEEEEEeccChHHHHHHHh
Q 038973 118 ACDVEQLADKLQI----GSKFYVIGISMGAYPVYGCLK 151 (341)
Q Consensus 118 ~~dl~~~l~~l~~----~~~~~lvGhS~Gg~~a~~~a~ 151 (341)
.+.|..+++..+. +.++++.|||+||.+|+..|.
T Consensus 294 l~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 294 LTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 4445555554421 258999999999999998875
No 230
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.05 E-value=0.12 Score=38.56 Aligned_cols=56 Identities=23% Similarity=0.284 Sum_probs=42.4
Q ss_pred cEEEEEeecCCCCChHHHHH---HHhhCCC--cEEEEecCCCcccccC----HHHHHHHHHHHhh
Q 038973 285 SVHIWQGCEDRIIPSQINQF---ISEKLPW--IQYHEVPDAGHLFIFE----RKFCEAIIRALLV 340 (341)
Q Consensus 285 Pvlii~g~~D~~~p~~~~~~---~~~~~~~--~~~~~~~~~gH~~~~e----p~~~~~~i~~fl~ 340 (341)
+.+-|-|+.|.++.+..... |+..+|. ...++.+|+||+.... .+++...|.+|+.
T Consensus 136 aLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~ 200 (202)
T PF06850_consen 136 ALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIR 200 (202)
T ss_pred eeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHH
Confidence 47779999999998766544 4455553 4677889999988774 6778888888875
No 231
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=94.04 E-value=0.18 Score=44.03 Aligned_cols=113 Identities=18% Similarity=0.091 Sum_probs=63.9
Q ss_pred EEEccCCCCCCCceEEEEcCCCC---CCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHH---
Q 038973 53 YREAGVPKEEANHKIIIIHGFGS---SKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLAD--- 126 (341)
Q Consensus 53 ~~~~g~~~~~~~~~vl~~hG~~~---~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~--- 126 (341)
|+.|-++.+.++..|+=+||.|. ++..-+...+..++..|.-|+.+|+-=.-+...+ ..+++..-.-.-+++
T Consensus 385 ~~~wh~P~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFP--RaleEv~fAYcW~inn~a 462 (880)
T KOG4388|consen 385 LELWHRPAPRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPFP--RALEEVFFAYCWAINNCA 462 (880)
T ss_pred cccCCCCCCCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCCC--cHHHHHHHHHHHHhcCHH
Confidence 44443433334556777899884 4555566777788888888999998533222211 123332222222222
Q ss_pred HhCC-CCcEEEEEeccChHHHHHHHhh----ccccccceeeecccc
Q 038973 127 KLQI-GSKFYVIGISMGAYPVYGCLKY----IPQRLAGASLVVPFV 167 (341)
Q Consensus 127 ~l~~-~~~~~lvGhS~Gg~~a~~~a~~----~p~~v~~~il~~~~~ 167 (341)
.+|. +++|+++|-|.||.+.+-.+.+ .=..-+++++.-++.
T Consensus 463 llG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~pt 508 (880)
T KOG4388|consen 463 LLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPPT 508 (880)
T ss_pred HhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecChh
Confidence 2333 3799999999999865544432 111234666655443
No 232
>PLN02761 lipase class 3 family protein
Probab=94.03 E-value=0.063 Score=46.49 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHhC-----CCCcEEEEEeccChHHHHHHHh
Q 038973 117 EACDVEQLADKLQ-----IGSKFYVIGISMGAYPVYGCLK 151 (341)
Q Consensus 117 ~~~dl~~~l~~l~-----~~~~~~lvGhS~Gg~~a~~~a~ 151 (341)
+.+.|..+++... .+-++++.|||+||.+|+..|.
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 3445555555441 2247999999999999998774
No 233
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.83 E-value=1.1 Score=39.50 Aligned_cols=114 Identities=13% Similarity=0.113 Sum_probs=68.2
Q ss_pred EEEEEEccCCCCCCCceEEEEcCCCCCCCc-chh----hHHHHHHhcCceEEEEcCCCCCCCCC--CC--CCC-------
Q 038973 50 HVAYREAGVPKEEANHKIIIIHGFGSSKDL-NLP----VSQELIEELKIYFLSFDRPGYGESDP--HP--LRT------- 113 (341)
Q Consensus 50 ~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~-~~~----~~~~l~~~~~~~vi~~D~~G~G~S~~--~~--~~~------- 113 (341)
.|.+..+-|. .-+ .-++.+-|.+..... +.. +...+. .||.++.=|- ||..+.. .. ..+
T Consensus 16 ~i~fev~LP~-~WN-gR~~~~GgGG~~G~i~~~~~~~~~~~~~~--~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~df 90 (474)
T PF07519_consen 16 NIRFEVWLPD-NWN-GRFLQVGGGGFAGGINYADGKASMATALA--RGYATASTDS-GHQGSAGSDDASFGNNPEALLDF 90 (474)
T ss_pred eEEEEEECCh-hhc-cCeEEECCCeeeCcccccccccccchhhh--cCeEEEEecC-CCCCCcccccccccCCHHHHHHH
Confidence 6777777553 222 234554444333222 222 223333 3999999886 5554432 11 111
Q ss_pred ----ccchHHHHHHHHHHh---CCCCcEEEEEeccChHHHHHHHhhccccccceeeecccccc
Q 038973 114 ----VKTEACDVEQLADKL---QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVHY 169 (341)
Q Consensus 114 ----~~~~~~dl~~~l~~l---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~~ 169 (341)
+.+.+.--.++++.+ .. +.-+..|.|.||.-++..|++||+-+++++.-+|...+
T Consensus 91 a~ra~h~~~~~aK~l~~~~Yg~~p-~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~ 152 (474)
T PF07519_consen 91 AYRALHETTVVAKALIEAFYGKAP-KYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINW 152 (474)
T ss_pred HhhHHHHHHHHHHHHHHHHhCCCC-CceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHH
Confidence 122222223344433 23 67889999999999999999999999999999998753
No 234
>PLN02719 triacylglycerol lipase
Probab=93.60 E-value=0.087 Score=45.58 Aligned_cols=35 Identities=17% Similarity=0.122 Sum_probs=23.8
Q ss_pred HHHHHHHHHHhC----CCCcEEEEEeccChHHHHHHHhh
Q 038973 118 ACDVEQLADKLQ----IGSKFYVIGISMGAYPVYGCLKY 152 (341)
Q Consensus 118 ~~dl~~~l~~l~----~~~~~~lvGhS~Gg~~a~~~a~~ 152 (341)
.+.|..+++... .+.++.+.|||+||.+|+..|..
T Consensus 280 l~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 280 LTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 344445554432 12479999999999999987753
No 235
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=93.14 E-value=0.51 Score=39.22 Aligned_cols=75 Identities=23% Similarity=0.263 Sum_probs=49.3
Q ss_pred eEEEEcCC-CCCCCCCCC--CC-CccchHHHHHHHHHHh----C--CCCcEEEEEeccChHHHHHHHhh----c------
Q 038973 94 YFLSFDRP-GYGESDPHP--LR-TVKTEACDVEQLADKL----Q--IGSKFYVIGISMGAYPVYGCLKY----I------ 153 (341)
Q Consensus 94 ~vi~~D~~-G~G~S~~~~--~~-~~~~~~~dl~~~l~~l----~--~~~~~~lvGhS~Gg~~a~~~a~~----~------ 153 (341)
+++-+|.| |.|.|-... .+ +-++.++|+..++..+ . .+.+++|.|-|.||..+-.+|.. .
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 48999988 999885322 22 2223456666666543 1 13689999999999876665542 1
Q ss_pred cccccceeeeccccc
Q 038973 154 PQRLAGASLVVPFVH 168 (341)
Q Consensus 154 p~~v~~~il~~~~~~ 168 (341)
+-.++|+++-++...
T Consensus 83 ~inLkGi~IGNg~t~ 97 (319)
T PLN02213 83 PINLQGYMLGNPVTY 97 (319)
T ss_pred ceeeeEEEeCCCCCC
Confidence 125788988888754
No 236
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=92.73 E-value=3.3 Score=31.14 Aligned_cols=98 Identities=14% Similarity=0.104 Sum_probs=59.0
Q ss_pred CceEccCCcEEEEEEccCCCCCCCce-EEEEcCCCCCCCcchhhHHHHHHhcCceE------EEEcCCCCCCCCCCCCCC
Q 038973 41 PRIKLSDGRHVAYREAGVPKEEANHK-IIIIHGFGSSKDLNLPVSQELIEELKIYF------LSFDRPGYGESDPHPLRT 113 (341)
Q Consensus 41 ~~~~~~~g~~l~~~~~g~~~~~~~~~-vl~~hG~~~~~~~~~~~~~~l~~~~~~~v------i~~D~~G~G~S~~~~~~~ 113 (341)
..+.. +|..+.|..+....=..+.. |-++-|++.....-.+++..+.++ |+.+ +.++.. ..
T Consensus 38 ge~~~-~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e~P~l~~l~~~-~~~~~~y~~t~~IN~d----------d~ 105 (184)
T TIGR01626 38 GEIVL-SGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXNASLIDAIKAA-KFPPVKYQTTTIINAD----------DA 105 (184)
T ss_pred ceEEE-cCCcccceeccHHHcCCCEEEEEEEecCCChhhccchHHHHHHHc-CCCcccccceEEEECc----------cc
Confidence 35555 55679999986543223333 335567888888889999999765 7666 666531 12
Q ss_pred ccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHH
Q 038973 114 VKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCL 150 (341)
Q Consensus 114 ~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a 150 (341)
.......+..+++..+.+-++..+..+-.|.++..+.
T Consensus 106 ~~~~~~fVk~fie~~~~~~P~~~vllD~~g~v~~~~g 142 (184)
T TIGR01626 106 IVGTGMFVKSSAKKGKKENPWSQVVLDDKGAVKNAWQ 142 (184)
T ss_pred hhhHHHHHHHHHHHhcccCCcceEEECCcchHHHhcC
Confidence 3334455667777766534444455555565554443
No 237
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=92.67 E-value=0.14 Score=42.70 Aligned_cols=37 Identities=14% Similarity=0.091 Sum_probs=29.0
Q ss_pred cchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhh
Q 038973 115 KTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKY 152 (341)
Q Consensus 115 ~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 152 (341)
..+.+++..+++...- -++.+.|||+||.+|...|..
T Consensus 155 ~~~~~~~~~L~~~~~~-~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPN-YSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCC-cEEEEecCChHHHHHHHHHHH
Confidence 3556677777777664 799999999999999887753
No 238
>PLN02847 triacylglycerol lipase
Probab=92.27 E-value=0.19 Score=44.34 Aligned_cols=21 Identities=19% Similarity=0.097 Sum_probs=18.2
Q ss_pred CcEEEEEeccChHHHHHHHhh
Q 038973 132 SKFYVIGISMGAYPVYGCLKY 152 (341)
Q Consensus 132 ~~~~lvGhS~Gg~~a~~~a~~ 152 (341)
-+++++|||+||.+|..++..
T Consensus 251 YkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred CeEEEeccChHHHHHHHHHHH
Confidence 589999999999999887654
No 239
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.31 E-value=0.76 Score=35.87 Aligned_cols=40 Identities=20% Similarity=0.304 Sum_probs=28.1
Q ss_pred CccchHHHHHHHHHH-hCCCCcEEEEEeccChHHHHHHHhh
Q 038973 113 TVKTEACDVEQLADK-LQIGSKFYVIGISMGAYPVYGCLKY 152 (341)
Q Consensus 113 ~~~~~~~dl~~~l~~-l~~~~~~~lvGhS~Gg~~a~~~a~~ 152 (341)
+..+=++.+.+.++. ...+++++++|+|+|+.++...+.+
T Consensus 28 Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 444445556666654 2244799999999999999887654
No 240
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=90.88 E-value=10 Score=33.09 Aligned_cols=113 Identities=12% Similarity=0.038 Sum_probs=66.8
Q ss_pred CCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcch--hhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCc-cchHHHHHH
Q 038973 47 DGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNL--PVSQELIEELKIYFLSFDRPGYGESDPHPLRTV-KTEACDVEQ 123 (341)
Q Consensus 47 ~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~--~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~-~~~~~dl~~ 123 (341)
.+.++.|.-. |+. -.+|..|.+.|+-. ++-++ .++..|..- -.+.-|.|=-|.+=-.....+ +.+.+-|.+
T Consensus 274 ~reEi~yYFn-PGD-~KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~P---fLL~~DpRleGGaFYlGs~eyE~~I~~~I~~ 347 (511)
T TIGR03712 274 KRQEFIYYFN-PGD-FKPPLNVYFSGYRP-AEGFEGYFMMKRLGAP---FLLIGDPRLEGGAFYLGSDEYEQGIINVIQE 347 (511)
T ss_pred CCCeeEEecC-CcC-CCCCeEEeeccCcc-cCcchhHHHHHhcCCC---eEEeeccccccceeeeCcHHHHHHHHHHHHH
Confidence 4444544443 331 23456788888866 55555 334444332 255667887766521111122 234556677
Q ss_pred HHHHhCCC-CcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 124 LADKLQIG-SKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 124 ~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
.++.||.+ +..+|-|-|||..-|+.+++.. .-.++|+--|.+
T Consensus 348 ~L~~LgF~~~qLILSGlSMGTfgAlYYga~l--~P~AIiVgKPL~ 390 (511)
T TIGR03712 348 KLDYLGFDHDQLILSGLSMGTFGALYYGAKL--SPHAIIVGKPLV 390 (511)
T ss_pred HHHHhCCCHHHeeeccccccchhhhhhcccC--CCceEEEcCccc
Confidence 78888763 5799999999999999999874 234555544543
No 241
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=89.10 E-value=0.63 Score=36.92 Aligned_cols=34 Identities=12% Similarity=0.107 Sum_probs=25.0
Q ss_pred HHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhc
Q 038973 120 DVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYI 153 (341)
Q Consensus 120 dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 153 (341)
||...+..+-.+.++.+-|||+||.+|..+..++
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 3444444444457999999999999999887775
No 242
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=89.10 E-value=0.63 Score=36.92 Aligned_cols=34 Identities=12% Similarity=0.107 Sum_probs=25.0
Q ss_pred HHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhc
Q 038973 120 DVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYI 153 (341)
Q Consensus 120 dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 153 (341)
||...+..+-.+.++.+-|||+||.+|..+..++
T Consensus 264 dI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 264 DILGAVRRIYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred HHHHHHHHhCCCceEEEeccccchHHHHHhcccc
Confidence 3444444444457999999999999999887775
No 243
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=89.09 E-value=4.9 Score=32.69 Aligned_cols=88 Identities=18% Similarity=0.295 Sum_probs=48.0
Q ss_pred ceEEEEcCCCCCCCcch--hhHHHHHHhc----CceEEEEcCCCCCCC--------CCCC--------CCCccchHHHHH
Q 038973 65 HKIIIIHGFGSSKDLNL--PVSQELIEEL----KIYFLSFDRPGYGES--------DPHP--------LRTVKTEACDVE 122 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~--~~~~~l~~~~----~~~vi~~D~~G~G~S--------~~~~--------~~~~~~~~~dl~ 122 (341)
..|||+=|.+.+...-. ..+.+|.+.+ +-..+.+=.+|-|.. .... ...+++-+.+..
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 45777777765543221 2222332221 223555666777761 1110 113333333322
Q ss_pred -HHHHHhCCCCcEEEEEeccChHHHHHHHhh
Q 038973 123 -QLADKLQIGSKFYVIGISMGAYPVYGCLKY 152 (341)
Q Consensus 123 -~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 152 (341)
.+.+....++++.++|.|-|+..|-.++..
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 333555566899999999999999888754
No 244
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.94 E-value=1.3 Score=39.23 Aligned_cols=49 Identities=16% Similarity=0.125 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhCC--CCcEEEEEeccChHHHHHHHhh-----ccc------cccceeeeccc
Q 038973 118 ACDVEQLADKLQI--GSKFYVIGISMGAYPVYGCLKY-----IPQ------RLAGASLVVPF 166 (341)
Q Consensus 118 ~~dl~~~l~~l~~--~~~~~lvGhS~Gg~~a~~~a~~-----~p~------~v~~~il~~~~ 166 (341)
...+.+.+...++ +.+++.+||||||.++=.+... .|+ ..+|+|+++.+
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 3344444444443 3689999999999887554432 233 35667776653
No 245
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=84.15 E-value=1.7 Score=38.28 Aligned_cols=58 Identities=19% Similarity=0.186 Sum_probs=42.6
Q ss_pred ccEEEEEeecCCCCChHHHHHHHhhC----C--------CcEEEEecCCCcccccC---HHHHHHHHHHHhhC
Q 038973 284 GSVHIWQGCEDRIIPSQINQFISEKL----P--------WIQYHEVPDAGHLFIFE---RKFCEAIIRALLVR 341 (341)
Q Consensus 284 ~Pvlii~g~~D~~~p~~~~~~~~~~~----~--------~~~~~~~~~~gH~~~~e---p~~~~~~i~~fl~~ 341 (341)
-.+++.||..|.++|+.....+.+.. . -.++..+||.+|+.--. +-.....|.+|+++
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 34999999999999987765554433 2 14899999999987653 44566777778763
No 246
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=83.22 E-value=8.4 Score=29.41 Aligned_cols=66 Identities=15% Similarity=0.202 Sum_probs=41.2
Q ss_pred CCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCc-eEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEE
Q 038973 59 PKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKI-YFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVI 137 (341)
Q Consensus 59 ~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~-~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lv 137 (341)
+..+..-+|++.||...++.......+....++|| .|+....-|+- ..+++.+.++..+. +.++|+
T Consensus 133 pl~k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP------------~~d~vi~~l~~~~~-~~v~L~ 199 (265)
T COG4822 133 PLNKDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYP------------LVDTVIEYLRKNGI-KEVHLI 199 (265)
T ss_pred CcCcCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCC------------cHHHHHHHHHHcCC-ceEEEe
Confidence 33345567888899888777666677777777777 45555444331 24555566666666 555554
No 247
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.67 E-value=3.7 Score=35.80 Aligned_cols=39 Identities=21% Similarity=0.286 Sum_probs=30.4
Q ss_pred CCCCcEEEEEeccChHHHHHHHhhc-----cccccceeeeccccc
Q 038973 129 QIGSKFYVIGISMGAYPVYGCLKYI-----PQRLAGASLVVPFVH 168 (341)
Q Consensus 129 ~~~~~~~lvGhS~Gg~~a~~~a~~~-----p~~v~~~il~~~~~~ 168 (341)
|. .|+.|||+|+|+.+...++..- -+.|..+++++++..
T Consensus 445 G~-RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~ 488 (633)
T KOG2385|consen 445 GN-RPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVP 488 (633)
T ss_pred CC-CceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCcc
Confidence 55 7999999999999988766521 235889999998754
No 248
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=78.04 E-value=7.5 Score=33.92 Aligned_cols=118 Identities=15% Similarity=0.021 Sum_probs=62.9
Q ss_pred EEEEccC-CCCCCCceEEEEcCCCCC-----CCcchhhHHHHHHhcCceEEEEcCCC-------C-CCCCCCCCCCccch
Q 038973 52 AYREAGV-PKEEANHKIIIIHGFGSS-----KDLNLPVSQELIEELKIYFLSFDRPG-------Y-GESDPHPLRTVKTE 117 (341)
Q Consensus 52 ~~~~~g~-~~~~~~~~vl~~hG~~~~-----~~~~~~~~~~l~~~~~~~vi~~D~~G-------~-G~S~~~~~~~~~~~ 117 (341)
+.-.|.+ +++.+..++|.+-|.|.- -..|+ .+.|+..-+..|+.+++|- . |.++.+....+-|+
T Consensus 122 YlNVW~P~~~p~n~tVlVWiyGGGF~sGt~SLdvYd--Gk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQ 199 (601)
T KOG4389|consen 122 YLNVWAPAADPYNLTVLVWIYGGGFYSGTPSLDVYD--GKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQ 199 (601)
T ss_pred EEEEeccCCCCCCceEEEEEEcCccccCCcceeeec--cceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHH
Confidence 3344444 233344567777776532 22333 2334444355566666661 2 33333334444444
Q ss_pred H---HHHHHHHHHhCC-CCcEEEEEeccChHH-HHHHHhh-ccccccceeeecccccccC
Q 038973 118 A---CDVEQLADKLQI-GSKFYVIGISMGAYP-VYGCLKY-IPQRLAGASLVVPFVHYWW 171 (341)
Q Consensus 118 ~---~dl~~~l~~l~~-~~~~~lvGhS~Gg~~-a~~~a~~-~p~~v~~~il~~~~~~~~~ 171 (341)
. +.+.+=+..+|- .+++.|+|.|.|+.- .+++.+= -...++..|+-++.....|
T Consensus 200 qLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~~pW 259 (601)
T KOG4389|consen 200 QLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLNNPW 259 (601)
T ss_pred HHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCCCCc
Confidence 3 345555555543 278999999999874 3443321 1135778888877766544
No 249
>PRK12467 peptide synthase; Provisional
Probab=77.09 E-value=9.7 Score=43.64 Aligned_cols=97 Identities=11% Similarity=-0.066 Sum_probs=66.1
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChH
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAY 144 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ 144 (341)
+.+++.|...++...+.++...+.. +..++.+..++.-.. .....++++++....+.+.......+..+.|+|+||.
T Consensus 3693 ~~l~~~h~~~r~~~~~~~l~~~l~~--~~~~~~l~~~~~~~d-~~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~~ 3769 (3956)
T PRK12467 3693 PALFCRHEGLGTVFDYEPLAVILEG--DRHVLGLTCRHLLDD-GWQDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGGT 3769 (3956)
T ss_pred cceeeechhhcchhhhHHHHHHhCC--CCcEEEEeccccccc-cCCccchHHHHHHHHHHHHHhccCCCeeeeeeecchH
Confidence 5699999999888877777666644 355888777654322 2233467777777777776665446899999999999
Q ss_pred HHHHHHhh---ccccccceeeec
Q 038973 145 PVYGCLKY---IPQRLAGASLVV 164 (341)
Q Consensus 145 ~a~~~a~~---~p~~v~~~il~~ 164 (341)
++..++.. ..+.+.-+.++.
T Consensus 3770 ~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3770 LARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred HHHHHHHHHHHcCCceeEEEEEe
Confidence 99887754 234455454543
No 250
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=74.58 E-value=36 Score=31.70 Aligned_cols=75 Identities=12% Similarity=-0.038 Sum_probs=45.1
Q ss_pred ceEEEEcCCCC----------CCCcchhhHHHHHHhcCceEEEEcCCC---CCCCCCCC-------CCCccchHHHHHHH
Q 038973 65 HKIIIIHGFGS----------SKDLNLPVSQELIEELKIYFLSFDRPG---YGESDPHP-------LRTVKTEACDVEQL 124 (341)
Q Consensus 65 ~~vl~~hG~~~----------~~~~~~~~~~~l~~~~~~~vi~~D~~G---~G~S~~~~-------~~~~~~~~~dl~~~ 124 (341)
.+||+.|.... +.+.++..+..|.+. ||+++.+|--- .|....+. +....+....+.-+
T Consensus 49 ~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~n-GY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~sny~~AlPI 127 (672)
T PRK14581 49 FVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRDN-GYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYSSFYRRVYPL 127 (672)
T ss_pred eEEEEeCcccCCCCccCccccCHHHHHHHHHHHHHC-cCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCcchHHHHHHH
Confidence 45555666543 234566777777765 99999987321 12221111 12445577778889
Q ss_pred HHHhCCCCcEEEEEec
Q 038973 125 ADKLQIGSKFYVIGIS 140 (341)
Q Consensus 125 l~~l~~~~~~~lvGhS 140 (341)
|+..+....+.++|.-
T Consensus 128 LKkyg~pATfFvVg~w 143 (672)
T PRK14581 128 LKAYKWSAVLAPVGTW 143 (672)
T ss_pred HHHcCCCEEEEEechh
Confidence 9999984456666643
No 251
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=74.40 E-value=23 Score=23.62 Aligned_cols=80 Identities=15% Similarity=0.133 Sum_probs=50.6
Q ss_pred hhHHHHHHhcCceEEEEcCCCCCCCCCCC-CCCc-cchHHHHHHHHHHhCCCCcEEEEEeccChH--HHHHHHhhccccc
Q 038973 82 PVSQELIEELKIYFLSFDRPGYGESDPHP-LRTV-KTEACDVEQLADKLQIGSKFYVIGISMGAY--PVYGCLKYIPQRL 157 (341)
Q Consensus 82 ~~~~~l~~~~~~~vi~~D~~G~G~S~~~~-~~~~-~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~--~a~~~a~~~p~~v 157 (341)
+....+.+.+|+-.=.+.++..|.+-... .... +.=...|..+++.+.. .++++||=|--.= +-..++.++|++|
T Consensus 14 ~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~-~kfiLIGDsgq~DpeiY~~ia~~~P~~i 92 (100)
T PF09949_consen 14 PFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPE-RKFILIGDSGQHDPEIYAEIARRFPGRI 92 (100)
T ss_pred HHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCC-CcEEEEeeCCCcCHHHHHHHHHHCCCCE
Confidence 45555555556655556666665543211 1111 2334567788887766 7999999986553 4445788899999
Q ss_pred cceee
Q 038973 158 AGASL 162 (341)
Q Consensus 158 ~~~il 162 (341)
.++.+
T Consensus 93 ~ai~I 97 (100)
T PF09949_consen 93 LAIYI 97 (100)
T ss_pred EEEEE
Confidence 88765
No 252
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=70.63 E-value=57 Score=27.07 Aligned_cols=98 Identities=12% Similarity=0.117 Sum_probs=55.6
Q ss_pred CCceEEEEcCCCCC--CCcch---hhHHHHHHhcCceEEEEcCCCCCCCCCCC---------C--------CCccchHH-
Q 038973 63 ANHKIIIIHGFGSS--KDLNL---PVSQELIEELKIYFLSFDRPGYGESDPHP---------L--------RTVKTEAC- 119 (341)
Q Consensus 63 ~~~~vl~~hG~~~~--~~~~~---~~~~~l~~~~~~~vi~~D~~G~G~S~~~~---------~--------~~~~~~~~- 119 (341)
.+..|+++-|.... ..-+. .+...|...-+.+++++-.+|.|.-.-.. . .++...+.
T Consensus 30 ~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~ 109 (423)
T COG3673 30 MKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIRE 109 (423)
T ss_pred cceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 34566677765322 22222 33444544236778888888887653111 0 11222222
Q ss_pred HHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeec
Q 038973 120 DVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVV 164 (341)
Q Consensus 120 dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~ 164 (341)
.-.-++++..++++|+++|+|-|+.++-.+|.. |+.+-+++
T Consensus 110 AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm----ir~vGlls 150 (423)
T COG3673 110 AYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM----IRHVGLLS 150 (423)
T ss_pred HHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH----HHHhhhhc
Confidence 222344556677899999999999999877764 44444444
No 253
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=69.72 E-value=5.2 Score=32.86 Aligned_cols=30 Identities=17% Similarity=0.125 Sum_probs=23.7
Q ss_pred HHHHHHHhCCCCcEEEEEeccChHHHHHHHh
Q 038973 121 VEQLADKLQIGSKFYVIGISMGAYPVYGCLK 151 (341)
Q Consensus 121 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~ 151 (341)
+.+++..+|+ ++-.++|||+|-..|+.++.
T Consensus 72 ~~~~l~~~Gi-~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGV-RPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCC-cccEEEecCHHHHHHHHHhC
Confidence 3455667788 78899999999998887664
No 254
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=69.20 E-value=3.5 Score=34.35 Aligned_cols=30 Identities=27% Similarity=0.307 Sum_probs=23.7
Q ss_pred HHHHHHHhCCCCcEEEEEeccChHHHHHHHh
Q 038973 121 VEQLADKLQIGSKFYVIGISMGAYPVYGCLK 151 (341)
Q Consensus 121 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~ 151 (341)
+.++++..|+ ++-.++|||+|=..|+.++.
T Consensus 74 l~~~l~~~Gi-~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGI-KPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTH-CESEEEESTTHHHHHHHHTT
T ss_pred hhhhhccccc-ccceeeccchhhHHHHHHCC
Confidence 4456677788 79999999999888876654
No 255
>PRK02399 hypothetical protein; Provisional
Probab=68.63 E-value=60 Score=28.00 Aligned_cols=95 Identities=20% Similarity=0.236 Sum_probs=57.0
Q ss_pred EEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCC------------------------CccchHHHHHH
Q 038973 68 IIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLR------------------------TVKTEACDVEQ 123 (341)
Q Consensus 68 l~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~------------------------~~~~~~~dl~~ 123 (341)
|++=|...++..=..+++....+.|..|+.+|.-..|....+.+. .++.+++-...
T Consensus 6 I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga~~ 85 (406)
T PRK02399 6 IYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGAAA 85 (406)
T ss_pred EEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHHHH
Confidence 445566666554444445544555899999998544422211110 11233333444
Q ss_pred HHHHh----CCCCcEEEEEeccChHHHHHHHhhccccccceeee
Q 038973 124 LADKL----QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLV 163 (341)
Q Consensus 124 ~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~ 163 (341)
++..+ ++ +-++-+|-|.|..++......-|--+-++++-
T Consensus 86 ~v~~L~~~g~i-~gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 86 FVRELYERGDV-AGVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHHHhcCCc-cEEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 44443 34 56888999999999999888878766666543
No 256
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=65.86 E-value=6.6 Score=32.26 Aligned_cols=30 Identities=20% Similarity=0.045 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCCcEEEEEeccChHHHHHHHh
Q 038973 121 VEQLADKLQIGSKFYVIGISMGAYPVYGCLK 151 (341)
Q Consensus 121 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~ 151 (341)
+.+++...++ ++..++|||+|=..|+.++.
T Consensus 66 l~~~l~~~g~-~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLP-RPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCC-CCcEEeecCHHHHHHHHHhC
Confidence 3455566788 79999999999988887664
No 257
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=65.40 E-value=68 Score=29.99 Aligned_cols=61 Identities=11% Similarity=-0.100 Sum_probs=36.1
Q ss_pred CCcchhhHHHHHHhcCceEEEEcCCC---CCCCCCCC-------CCCccchHHHHHHHHHHhCCCCcEEEEE
Q 038973 77 KDLNLPVSQELIEELKIYFLSFDRPG---YGESDPHP-------LRTVKTEACDVEQLADKLQIGSKFYVIG 138 (341)
Q Consensus 77 ~~~~~~~~~~l~~~~~~~vi~~D~~G---~G~S~~~~-------~~~~~~~~~dl~~~l~~l~~~~~~~lvG 138 (341)
.+.++..+..|.+. ||++|.+|--- .|....+. +....+....+.-+|+..+..-.+.++|
T Consensus 71 pe~Fe~qL~~Lk~n-GY~~ISl~el~~~~~g~~~LP~K~VaLTFDDGy~s~yt~A~PILkkygvpATfFlvg 141 (671)
T PRK14582 71 TSALREQFAWLREN-GYQPVSVAQILEAHRGGKPLPEKAVLLTFDDGYSSFYTRVFPILQAFQWPAVWAPVG 141 (671)
T ss_pred HHHHHHHHHHHHHC-cCEEccHHHHHHHHhcCCCCCCCeEEEEEEcCCCchHHHHHHHHHHcCCCEEEEEec
Confidence 34567777777765 99999988321 12211111 1233445567888889888743444555
No 258
>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].
Probab=64.28 E-value=7.3 Score=18.25 Aligned_cols=13 Identities=23% Similarity=0.222 Sum_probs=7.8
Q ss_pred ChHHHHHHHHHHH
Q 038973 1 MFAPIAVALAVGL 13 (341)
Q Consensus 1 m~~~~~~~~~~~~ 13 (341)
|+||+++.+++++
T Consensus 6 mmKkil~~l~a~~ 18 (25)
T PF08139_consen 6 MMKKILFPLLALF 18 (25)
T ss_pred HHHHHHHHHHHHH
Confidence 4677766655544
No 259
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=62.91 E-value=85 Score=27.15 Aligned_cols=96 Identities=22% Similarity=0.220 Sum_probs=57.2
Q ss_pred eEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCC-----------C-------------ccchHHHH
Q 038973 66 KIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLR-----------T-------------VKTEACDV 121 (341)
Q Consensus 66 ~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~-----------~-------------~~~~~~dl 121 (341)
+|+++ |...++..=..+++....+.|..|+.+|.--.|.+....+. + ++.+++-+
T Consensus 3 tI~ii-gT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 3 TIAII-GTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred EEEEE-EccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 34444 55555443333344444446999999998666555433221 1 12223333
Q ss_pred HHHHHHh----CCCCcEEEEEeccChHHHHHHHhhccccccceeee
Q 038973 122 EQLADKL----QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLV 163 (341)
Q Consensus 122 ~~~l~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~ 163 (341)
..++..+ .+ +-++-+|-|.|..++......-|--+-++++-
T Consensus 82 ~~~v~~l~~~g~i-~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmVS 126 (403)
T PF06792_consen 82 ARFVSDLYDEGKI-DGVIGIGGSGGTALATAAMRALPIGFPKLMVS 126 (403)
T ss_pred HHHHHHHHhcCCc-cEEEEecCCccHHHHHHHHHhCCCCCCeEEEE
Confidence 4444444 24 46788999999999999888888777776653
No 260
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=62.80 E-value=10 Score=31.43 Aligned_cols=32 Identities=22% Similarity=0.055 Sum_probs=25.4
Q ss_pred HHHHHHHhCCCCcEEEEEeccChHHHHHHHhhc
Q 038973 121 VEQLADKLQIGSKFYVIGISMGAYPVYGCLKYI 153 (341)
Q Consensus 121 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 153 (341)
+.+.++..++ ..-.++|-|+|+.++..++..+
T Consensus 33 vL~aLee~gi-~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGI-PVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCC
Confidence 4555666687 5678899999999999998764
No 261
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=62.53 E-value=28 Score=26.80 Aligned_cols=65 Identities=6% Similarity=-0.003 Sum_probs=46.3
Q ss_pred cCc-eEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEecc----ChHHHHHHHhhcc-ccccceeee
Q 038973 91 LKI-YFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISM----GAYPVYGCLKYIP-QRLAGASLV 163 (341)
Q Consensus 91 ~~~-~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~----Gg~~a~~~a~~~p-~~v~~~il~ 163 (341)
+|. +|+..|.+... .++.+.+++.+.++++..+. .++++|+|. |..++-++|.+-. ..+..++-+
T Consensus 75 ~G~d~V~~~~~~~~~------~~~~e~~a~al~~~i~~~~p--~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 75 MGADRAILVSDRAFA------GADTLATAKALAAAIKKIGV--DLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred cCCCEEEEEeccccc------CCChHHHHHHHHHHHHHhCC--CEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 465 57777766433 35788899999999988774 799999998 7788888887632 234444444
No 262
>COG3933 Transcriptional antiterminator [Transcription]
Probab=61.34 E-value=45 Score=28.97 Aligned_cols=72 Identities=19% Similarity=0.318 Sum_probs=54.5
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChH
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAY 144 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~ 144 (341)
..||+.||... +.+...++.+|...- -+.++|+| -+.+..+..+.+.+.+++... .+=.++=-+||..
T Consensus 110 ~vIiiAHG~sT-ASSmaevanrLL~~~--~~~aiDMP--------Ldvsp~~vle~l~e~~k~~~~-~~GlllLVDMGSL 177 (470)
T COG3933 110 KVIIIAHGYST-ASSMAEVANRLLGEE--IFIAIDMP--------LDVSPSDVLEKLKEYLKERDY-RSGLLLLVDMGSL 177 (470)
T ss_pred eEEEEecCcch-HHHHHHHHHHHhhcc--ceeeecCC--------CcCCHHHHHHHHHHHHHhcCc-cCceEEEEecchH
Confidence 57888899854 445567788888762 38999997 345788888888888888877 5657777899998
Q ss_pred HHHH
Q 038973 145 PVYG 148 (341)
Q Consensus 145 ~a~~ 148 (341)
.+..
T Consensus 178 ~~f~ 181 (470)
T COG3933 178 TSFG 181 (470)
T ss_pred HHHH
Confidence 7664
No 263
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=61.22 E-value=86 Score=25.26 Aligned_cols=88 Identities=25% Similarity=0.265 Sum_probs=51.3
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCC----------C-CC--------CccchHHHHHH
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPH----------P-LR--------TVKTEACDVEQ 123 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~----------~-~~--------~~~~~~~dl~~ 123 (341)
.-|.+++.||++.....-......+... ++.++..+...+|.+... . .. .......+...
T Consensus 48 ~~p~v~~~h~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (299)
T COG1073 48 KLPAVVFLHGFGSSKEQSLGYAVLLAEK-GYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDYRL 126 (299)
T ss_pred cCceEEeccCccccccCcchHHHHhhhc-eeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHHHH
Confidence 4578999999999888766655666655 677777765333322211 0 00 01111111111
Q ss_pred HHHHhCCCCcEEEEEeccChHHHHHHHhhcc
Q 038973 124 LADKLQIGSKFYVIGISMGAYPVYGCLKYIP 154 (341)
Q Consensus 124 ~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p 154 (341)
.... ..+....|+++|+..+..++...+
T Consensus 127 ~~~~---~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 127 LGAS---LGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred Hhhh---cCcceEEEEEeeccchHHHhhcch
Confidence 1111 157888999999988888887765
No 264
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=60.95 E-value=9 Score=31.32 Aligned_cols=30 Identities=13% Similarity=0.121 Sum_probs=22.7
Q ss_pred HHHHHHhC-CCCcEEEEEeccChHHHHHHHhh
Q 038973 122 EQLADKLQ-IGSKFYVIGISMGAYPVYGCLKY 152 (341)
Q Consensus 122 ~~~l~~l~-~~~~~~lvGhS~Gg~~a~~~a~~ 152 (341)
...+...+ + .+-.++|||+|=..|+.++..
T Consensus 73 ~~~l~~~g~i-~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 73 YLKLKEQGGL-KPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHHcCCC-CCCEEeecCHHHHHHHHHhCC
Confidence 34455566 7 789999999999888877643
No 265
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=60.83 E-value=12 Score=27.89 Aligned_cols=33 Identities=15% Similarity=-0.115 Sum_probs=24.9
Q ss_pred HHHHHHHhCCCCcEEEEEeccChHHHHHHHhhcc
Q 038973 121 VEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIP 154 (341)
Q Consensus 121 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p 154 (341)
+.+.++..++ ..-.+.|-|.|+.++..++...+
T Consensus 16 vl~aL~e~gi-~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGP-LIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCC-CCCEEEEECHHHHHHHHHHcCCC
Confidence 3444555577 57789999999999999988643
No 266
>PRK13728 conjugal transfer protein TrbB; Provisional
Probab=60.46 E-value=30 Score=26.06 Aligned_cols=58 Identities=19% Similarity=0.331 Sum_probs=43.1
Q ss_pred CCCceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCC
Q 038973 39 TSPRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYG 104 (341)
Q Consensus 39 ~~~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G 104 (341)
..+.+...+|..+....++ .|+|...++.......+.+.++.+++|+.|+.+..-+.+
T Consensus 54 ~~~~f~l~dG~~v~lsd~~--------lV~FwaswCp~C~~e~P~L~~l~~~~g~~Vi~Vs~D~~~ 111 (181)
T PRK13728 54 APRWFRLSNGRQVNLADWK--------VVLFMQGHCPYCHQFDPVLKQLAQQYGFSVFPYTLDGQG 111 (181)
T ss_pred CCCccCCCCCCEeehhHce--------EEEEECCCCHhHHHHHHHHHHHHHHcCCEEEEEEeCCCC
Confidence 4556777788776655552 677777777777777788889999999999999876443
No 267
>PRK10279 hypothetical protein; Provisional
Probab=60.27 E-value=11 Score=31.12 Aligned_cols=33 Identities=21% Similarity=0.024 Sum_probs=26.0
Q ss_pred HHHHHHHhCCCCcEEEEEeccChHHHHHHHhhcc
Q 038973 121 VEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIP 154 (341)
Q Consensus 121 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p 154 (341)
+.+.++..++ ..-.+.|-|+|+.++..+|....
T Consensus 23 VL~aL~E~gi-~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGI-EIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCC-CcCEEEEEcHHHHHHHHHHcCCh
Confidence 3455556687 67789999999999999997654
No 268
>PLN02748 tRNA dimethylallyltransferase
Probab=59.56 E-value=51 Score=29.25 Aligned_cols=77 Identities=14% Similarity=0.201 Sum_probs=48.6
Q ss_pred CCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEc----CCCCC--CCC------------------CCCCCCccch
Q 038973 62 EANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFD----RPGYG--ESD------------------PHPLRTVKTE 117 (341)
Q Consensus 62 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D----~~G~G--~S~------------------~~~~~~~~~~ 117 (341)
..++.+|+|-|-.+++.+ .++..|+.+++..||..| ++|.- ... +...++..++
T Consensus 19 ~~~~~~i~i~GptgsGKs--~la~~la~~~~~eii~~DsmQVYrgLdIgTaKpt~eE~~~VpHHLid~v~p~e~ysv~~F 96 (468)
T PLN02748 19 KGKAKVVVVMGPTGSGKS--KLAVDLASHFPVEIINADSMQVYSGLDVLTNKVPLHEQKGVPHHLLGVISPSVEFTAKDF 96 (468)
T ss_pred CCCCCEEEEECCCCCCHH--HHHHHHHHhcCeeEEcCchheeeCCcchhcCCCCHHHHcCCCCeeEeecCCCCcCcHHHH
Confidence 345668888887777654 345677777788899888 33321 111 1123678888
Q ss_pred HHHHHHHHHHhC-CCCcEEEEEec
Q 038973 118 ACDVEQLADKLQ-IGSKFYVIGIS 140 (341)
Q Consensus 118 ~~dl~~~l~~l~-~~~~~~lvGhS 140 (341)
.++....++.+. -++..+|||-|
T Consensus 97 ~~~A~~~I~~I~~rgk~PIlVGGT 120 (468)
T PLN02748 97 RDHAVPLIEEILSRNGLPVIVGGT 120 (468)
T ss_pred HHHHHHHHHHHHhcCCCeEEEcCh
Confidence 888888888762 22456676644
No 269
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=57.79 E-value=14 Score=29.89 Aligned_cols=32 Identities=16% Similarity=0.044 Sum_probs=24.9
Q ss_pred HHHHHHHhCCCCcEEEEEeccChHHHHHHHhhc
Q 038973 121 VEQLADKLQIGSKFYVIGISMGAYPVYGCLKYI 153 (341)
Q Consensus 121 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 153 (341)
+.+.+++.++ ..=.+.|-|+|+.++..+|...
T Consensus 28 VL~aLeE~gi-~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGI-PIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCC-CccEEEEECHHHHHHHHHHcCC
Confidence 4455566677 5667899999999999998763
No 270
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=56.86 E-value=61 Score=27.61 Aligned_cols=87 Identities=15% Similarity=0.162 Sum_probs=57.5
Q ss_pred CceEEEEcCCCCC-------CCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEE
Q 038973 64 NHKIIIIHGFGSS-------KDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYV 136 (341)
Q Consensus 64 ~~~vl~~hG~~~~-------~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~l 136 (341)
...||++||-+.+ .+.|..+++-+.++ + .+-.+|..-.|.-+ .+++-+.-++.+++.. +-.+
T Consensus 171 ~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r-~-lip~~D~AYQGF~~-----GleeDa~~lR~~a~~~----~~~l 239 (396)
T COG1448 171 EGSVVLLHGCCHNPTGIDPTEEQWQELADLIKER-G-LIPFFDIAYQGFAD-----GLEEDAYALRLFAEVG----PELL 239 (396)
T ss_pred CCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc-C-Ceeeeehhhhhhcc-----chHHHHHHHHHHHHhC----CcEE
Confidence 4579999987755 45687777777665 4 36678876555432 2555555555555542 3388
Q ss_pred EEeccChHHHHHHHhhccccccceeeeccc
Q 038973 137 IGISMGAYPVYGCLKYIPQRLAGASLVVPF 166 (341)
Q Consensus 137 vGhS~Gg~~a~~~a~~~p~~v~~~il~~~~ 166 (341)
+..|+.=..++ |.+||-++++++..
T Consensus 240 va~S~SKnfgL-----YgERVGa~~vva~~ 264 (396)
T COG1448 240 VASSFSKNFGL-----YGERVGALSVVAED 264 (396)
T ss_pred EEehhhhhhhh-----hhhccceeEEEeCC
Confidence 88888655543 67899999999763
No 271
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=56.68 E-value=14 Score=27.98 Aligned_cols=30 Identities=23% Similarity=0.039 Sum_probs=22.8
Q ss_pred HHHHHhCCCCcEEEEEeccChHHHHHHHhhc
Q 038973 123 QLADKLQIGSKFYVIGISMGAYPVYGCLKYI 153 (341)
Q Consensus 123 ~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 153 (341)
+.++..++ ..=.+.|-|.||.++..++...
T Consensus 19 ~~L~e~~~-~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 19 KALEEAGI-LKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHcCC-CcceEEEECHHHHHHHHHHcCC
Confidence 34444566 5678999999999999988753
No 272
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=56.53 E-value=16 Score=28.56 Aligned_cols=30 Identities=17% Similarity=-0.040 Sum_probs=22.8
Q ss_pred HHHHHhCCCCcEEEEEeccChHHHHHHHhhc
Q 038973 123 QLADKLQIGSKFYVIGISMGAYPVYGCLKYI 153 (341)
Q Consensus 123 ~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 153 (341)
+.++..++ +.-.+.|-|.|+.++..++...
T Consensus 20 ~aL~e~gi-~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 20 AALLEMGL-EPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHcCC-CceEEEEeCHHHHHHHHHHcCC
Confidence 33444566 5668999999999999998754
No 273
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=56.18 E-value=8.4 Score=34.60 Aligned_cols=36 Identities=14% Similarity=0.125 Sum_probs=28.8
Q ss_pred EEEEEeccChHHHHHHHhhcc-ccccceeeecccccc
Q 038973 134 FYVIGISMGAYPVYGCLKYIP-QRLAGASLVVPFVHY 169 (341)
Q Consensus 134 ~~lvGhS~Gg~~a~~~a~~~p-~~v~~~il~~~~~~~ 169 (341)
++.-+.|-||..++..|.+.- ..|++++...|.+..
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~~ 323 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVNL 323 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccCC
Confidence 556689999999999888753 479999998887654
No 274
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=55.27 E-value=14 Score=30.59 Aligned_cols=32 Identities=19% Similarity=0.047 Sum_probs=25.9
Q ss_pred HHHHHHHhCCCCcEEEEEeccChHHHHHHHhhc
Q 038973 121 VEQLADKLQIGSKFYVIGISMGAYPVYGCLKYI 153 (341)
Q Consensus 121 l~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 153 (341)
+.+.++..++ ..-++.|-|+|+.++..+|..+
T Consensus 29 Vl~aL~e~gi-~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 29 VLKALEEAGI-PIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHcCC-CccEEEecCHHHHHHHHHHcCC
Confidence 4555666677 7889999999999999998753
No 275
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=54.08 E-value=1.2e+02 Score=24.59 Aligned_cols=74 Identities=12% Similarity=0.178 Sum_probs=44.7
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHhcCc-eEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEE-EEec
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEELKI-YFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYV-IGIS 140 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~-~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~l-vGhS 140 (341)
.+.||++--|...+.+.|...++.+... |- +++..+. |-|...+.....--...+..+-+..+. ++.+ -+||
T Consensus 131 ~gkPVilk~G~~~t~~e~~~Ave~i~~~-Gn~~i~l~~r---G~s~y~~~~~~~~dl~~i~~lk~~~~~--pV~~ds~Hs 204 (260)
T TIGR01361 131 QGKPVLLKRGMGNTIEEWLYAAEYILSS-GNGNVILCER---GIRTFEKATRNTLDLSAVPVLKKETHL--PIIVDPSHA 204 (260)
T ss_pred CCCcEEEeCCCCCCHHHHHHHHHHHHHc-CCCcEEEEEC---CCCCCCCCCcCCcCHHHHHHHHHhhCC--CEEEcCCCC
Confidence 4568999999999999999988888765 43 4555443 333321111111112223333343453 7888 7999
Q ss_pred cC
Q 038973 141 MG 142 (341)
Q Consensus 141 ~G 142 (341)
.|
T Consensus 205 ~G 206 (260)
T TIGR01361 205 AG 206 (260)
T ss_pred CC
Confidence 88
No 276
>PRK09810 entericidin A; Provisional
Probab=53.57 E-value=21 Score=19.12 Aligned_cols=14 Identities=14% Similarity=0.216 Sum_probs=8.0
Q ss_pred ChHHHHHHHHHHHH
Q 038973 1 MFAPIAVALAVGLI 14 (341)
Q Consensus 1 m~~~~~~~~~~~~~ 14 (341)
|||+++..++++++
T Consensus 1 mMkk~~~l~~~~~~ 14 (41)
T PRK09810 1 MMKRLIVLVLLAST 14 (41)
T ss_pred ChHHHHHHHHHHHH
Confidence 67776665544333
No 277
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=52.99 E-value=19 Score=25.18 Aligned_cols=20 Identities=10% Similarity=0.230 Sum_probs=16.8
Q ss_pred CCCceEEEEcCCCCCCCcch
Q 038973 62 EANHKIIIIHGFGSSKDLNL 81 (341)
Q Consensus 62 ~~~~~vl~~hG~~~~~~~~~ 81 (341)
+.+|.|+-+||++|++..|-
T Consensus 50 p~KpLVlSfHG~tGtGKn~v 69 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFV 69 (127)
T ss_pred CCCCEEEEeecCCCCcHHHH
Confidence 46788889999999988875
No 278
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=51.41 E-value=9.7 Score=33.12 Aligned_cols=36 Identities=8% Similarity=-0.037 Sum_probs=26.1
Q ss_pred HHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccc
Q 038973 123 QLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAG 159 (341)
Q Consensus 123 ~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~ 159 (341)
..+...++ .+-++.|-|.|+.+|..++...++.+..
T Consensus 93 kaL~E~gl-~p~vIsGTSaGAivAal~as~~~eel~~ 128 (421)
T cd07230 93 KALFEANL-LPRIISGSSAGSIVAAILCTHTDEEIPE 128 (421)
T ss_pred HHHHHcCC-CCCEEEEECHHHHHHHHHHcCCHHHHHH
Confidence 33334456 4568999999999999999876665443
No 279
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=50.54 E-value=85 Score=24.02 Aligned_cols=64 Identities=9% Similarity=0.013 Sum_probs=41.2
Q ss_pred CceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhc-c-ccccceeee
Q 038973 92 KIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYI-P-QRLAGASLV 163 (341)
Q Consensus 92 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~-p-~~v~~~il~ 163 (341)
++.++.+|-+|.... -.+..+++..+++.... ..++++=-+..+.-.+..+..+ . -.++++|+-
T Consensus 83 ~~D~vlIDT~Gr~~~-------d~~~~~el~~~~~~~~~-~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlT 148 (196)
T PF00448_consen 83 GYDLVLIDTAGRSPR-------DEELLEELKKLLEALNP-DEVHLVLSATMGQEDLEQALAFYEAFGIDGLILT 148 (196)
T ss_dssp TSSEEEEEE-SSSST-------HHHHHHHHHHHHHHHSS-SEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEE
T ss_pred CCCEEEEecCCcchh-------hHHHHHHHHHHhhhcCC-ccceEEEecccChHHHHHHHHHhhcccCceEEEE
Confidence 688999999986532 35567788888888876 5666665555555555444332 2 247888864
No 280
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=50.18 E-value=1.7e+02 Score=25.45 Aligned_cols=73 Identities=7% Similarity=0.111 Sum_probs=40.2
Q ss_pred CceEEEEcCCCCCCCcch-----hhHHHHHHhcCceEEEEcCCC--CCCCCCCCCCCccchHHHHHHHHHHhCC-CCcEE
Q 038973 64 NHKIIIIHGFGSSKDLNL-----PVSQELIEELKIYFLSFDRPG--YGESDPHPLRTVKTEACDVEQLADKLQI-GSKFY 135 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~~~-----~~~~~l~~~~~~~vi~~D~~G--~G~S~~~~~~~~~~~~~dl~~~l~~l~~-~~~~~ 135 (341)
+.++|+++... ..+|. ..+..|.+. |+.|+-++.-- +|+.....-.+.++..+.+...+..... ++++.
T Consensus 116 ~~pvvi~Pamn--~~m~~~p~~~~Nl~~L~~~-G~~ii~P~~g~la~~~~g~gr~~~~~~I~~~~~~~~~~~~l~gk~vl 192 (399)
T PRK05579 116 TAPVLVAPAMN--TQMWENPATQRNLATLRSR-GVEIIGPASGRLACGDVGPGRMAEPEEIVAAAERALSPKDLAGKRVL 192 (399)
T ss_pred CCCEEEEeCCC--hhHcCCHHHHHHHHHHHHC-CCEEECCCCccccCCCcCCCCCCCHHHHHHHHHHHhhhcccCCCEEE
Confidence 45777777553 33443 455667654 87777554211 3333333334677777777766643222 25666
Q ss_pred EEEe
Q 038973 136 VIGI 139 (341)
Q Consensus 136 lvGh 139 (341)
+.|-
T Consensus 193 ITgG 196 (399)
T PRK05579 193 ITAG 196 (399)
T ss_pred EeCC
Confidence 6676
No 281
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=49.26 E-value=23 Score=26.44 Aligned_cols=30 Identities=17% Similarity=-0.074 Sum_probs=22.7
Q ss_pred HHHHhCCCCcEEEEEeccChHHHHHHHhhcc
Q 038973 124 LADKLQIGSKFYVIGISMGAYPVYGCLKYIP 154 (341)
Q Consensus 124 ~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p 154 (341)
.++..+. ..=.+.|-|.|+.++..++...+
T Consensus 21 ~L~e~g~-~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 21 ALEEEGI-EIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHCCC-CeeEEEEeCHHHHHHHHHHcCCC
Confidence 3344566 56688999999999998887654
No 282
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=48.06 E-value=24 Score=27.46 Aligned_cols=32 Identities=19% Similarity=-0.005 Sum_probs=24.7
Q ss_pred HHHHHHhCCCCcEEEEEeccChHHHHHHHhhcc
Q 038973 122 EQLADKLQIGSKFYVIGISMGAYPVYGCLKYIP 154 (341)
Q Consensus 122 ~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p 154 (341)
.+.+.+.+. ..-.+.|.|.|+.++..++...+
T Consensus 17 l~aL~e~g~-~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 17 LKALAEAGI-EPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHcCC-CCCEEEEECHHHHHHHHHHcCCc
Confidence 344555566 56689999999999999998764
No 283
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=47.76 E-value=18 Score=32.54 Aligned_cols=31 Identities=26% Similarity=0.409 Sum_probs=24.5
Q ss_pred HHHH-HHhCCCCcEEEEEeccChHHHHHHHhhc
Q 038973 122 EQLA-DKLQIGSKFYVIGISMGAYPVYGCLKYI 153 (341)
Q Consensus 122 ~~~l-~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 153 (341)
.+++ +..|+ ++-.++|||+|=..|+..|.-.
T Consensus 255 a~ll~~~~GI-~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAI-KPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCC-CCCEEeecCHHHHHHHHHhCCC
Confidence 3445 57788 7899999999999888877644
No 284
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=46.46 E-value=10 Score=27.72 Aligned_cols=50 Identities=20% Similarity=0.249 Sum_probs=29.5
Q ss_pred EEEEcCCCCCCCCCC----CCCCccchHHHH----HHHHHHhCC---CCcEEEEEeccChH
Q 038973 95 FLSFDRPGYGESDPH----PLRTVKTEACDV----EQLADKLQI---GSKFYVIGISMGAY 144 (341)
Q Consensus 95 vi~~D~~G~G~S~~~----~~~~~~~~~~dl----~~~l~~l~~---~~~~~lvGhS~Gg~ 144 (341)
=+.+-+-|||..... .+++.++++.-| ..+.+..+. .+++.|+|-|++..
T Consensus 56 ~~rw~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 56 KVRWQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEEEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred CceEEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 455667789877221 235777888777 444444422 26899999999887
No 285
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=45.39 E-value=14 Score=32.01 Aligned_cols=37 Identities=11% Similarity=-0.083 Sum_probs=27.1
Q ss_pred HHHHhCCCCcEEEEEeccChHHHHHHHhhcccccccee
Q 038973 124 LADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGAS 161 (341)
Q Consensus 124 ~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~i 161 (341)
.+...++ .+=++.|-|.|+.+|..+|...++.+..++
T Consensus 88 aL~e~gl-lp~iI~GtSAGAivaalla~~t~~el~~~~ 124 (407)
T cd07232 88 ALLDADL-LPNVISGTSGGSLVAALLCTRTDEELKQLL 124 (407)
T ss_pred HHHhCCC-CCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 3333466 566899999999999999987666665543
No 286
>PLN03006 carbonate dehydratase
Probab=45.17 E-value=54 Score=26.98 Aligned_cols=31 Identities=19% Similarity=0.096 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHhCCCCcEEEEEeccChHHHHH
Q 038973 117 EACDVEQLADKLQIGSKFYVIGISMGAYPVYG 148 (341)
Q Consensus 117 ~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~ 148 (341)
....|+-.+.+|+. +.|+|+|||-=|.+...
T Consensus 158 ~~aSLEYAV~~L~V-~~IVV~GHs~CGaV~Aa 188 (301)
T PLN03006 158 TKAALEFSVNTLNV-ENILVIGHSRCGGIQAL 188 (301)
T ss_pred hhhhHHHHHHHhCC-CEEEEecCCCchHHHHH
Confidence 45678888899999 89999999987776643
No 287
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=44.72 E-value=15 Score=30.41 Aligned_cols=34 Identities=15% Similarity=0.043 Sum_probs=24.2
Q ss_pred HHHHHhCCCCcEEEEEeccChHHHHHHHhhccccc
Q 038973 123 QLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRL 157 (341)
Q Consensus 123 ~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 157 (341)
..+...++ .+-++.|-|.|+.+|..++...++.+
T Consensus 88 kaL~e~gl-~p~~i~GsSaGAivaa~~~~~t~~El 121 (323)
T cd07231 88 RTLVEHQL-LPRVIAGSSVGSIVCAIIATRTDEEL 121 (323)
T ss_pred HHHHHcCC-CCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 33344466 56679999999999999887644433
No 288
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=44.70 E-value=16 Score=31.25 Aligned_cols=39 Identities=10% Similarity=-0.153 Sum_probs=28.0
Q ss_pred HHHHHHhCCCCcEEEEEeccChHHHHHHHhhcccccccee
Q 038973 122 EQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGAS 161 (341)
Q Consensus 122 ~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~i 161 (341)
...+...|+ .+=++.|-|.|+.+|..+|...++.+..++
T Consensus 102 ~kaL~e~gl-~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 102 VKALWLRGL-LPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHcCC-CCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 344445566 566899999999999999986555554443
No 289
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=44.69 E-value=1.7e+02 Score=23.82 Aligned_cols=64 Identities=8% Similarity=0.174 Sum_probs=40.2
Q ss_pred CceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEE-EEeccChHHHHHHHhhc-cccccceeee
Q 038973 92 KIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYV-IGISMGAYPVYGCLKYI-PQRLAGASLV 163 (341)
Q Consensus 92 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~l-vGhS~Gg~~a~~~a~~~-p~~v~~~il~ 163 (341)
++.++.+|.+|.... -.+..+.+.++++.... ..+++ +.-++++.-+...+..+ +-.++++|+-
T Consensus 154 ~~D~ViIDt~Gr~~~-------~~~~l~el~~~~~~~~~-~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~T 219 (270)
T PRK06731 154 RVDYILIDTAGKNYR-------ASETVEEMIETMGQVEP-DYICLTLSASMKSKDMIEIITNFKDIHIDGIVFT 219 (270)
T ss_pred CCCEEEEECCCCCcC-------CHHHHHHHHHHHhhhCC-CeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEEE
Confidence 578999999987532 13345556666665555 34554 45567787777766654 3457777764
No 290
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=44.58 E-value=1.2e+02 Score=26.35 Aligned_cols=73 Identities=14% Similarity=0.090 Sum_probs=40.0
Q ss_pred ceEEEEcCCCCCC---CcchhhHHHHHHhcCceEEEEcCCC--CCCCCCCCCCCccchHHHHHHHHHH---hCCCCcEEE
Q 038973 65 HKIIIIHGFGSSK---DLNLPVSQELIEELKIYFLSFDRPG--YGESDPHPLRTVKTEACDVEQLADK---LQIGSKFYV 136 (341)
Q Consensus 65 ~~vl~~hG~~~~~---~~~~~~~~~l~~~~~~~vi~~D~~G--~G~S~~~~~~~~~~~~~dl~~~l~~---l~~~~~~~l 136 (341)
.++|+++-..... ......+..|.+. |+.|+-+..-- +|+.....-.+.+++.+.+...+.. +.- +++.+
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~~-G~~vv~P~~g~~ac~~~g~g~~~~~~~i~~~v~~~~~~~~~~~~-~~vli 190 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKDD-GYIFIEPDSGLLACGDEGKGRLAEPETIVKAAEREFSPKEDLEG-KRVLI 190 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHHC-CcEEECCCCcccccccccCCCCCCHHHHHHHHHHHHhhccccCC-ceEEE
Confidence 5677777653322 2334556677665 86665554322 2443333334677777777776644 332 56666
Q ss_pred EEe
Q 038973 137 IGI 139 (341)
Q Consensus 137 vGh 139 (341)
.|-
T Consensus 191 t~g 193 (390)
T TIGR00521 191 TAG 193 (390)
T ss_pred ecC
Confidence 666
No 291
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=44.56 E-value=33 Score=26.39 Aligned_cols=61 Identities=18% Similarity=0.158 Sum_probs=32.6
Q ss_pred CCceEEEEcCCCCCCCcch---hhHHHHHHhcCceEEEEcCC--CCCCCCCCCCCCccchHHHHHHHHHH
Q 038973 63 ANHKIIIIHGFGSSKDLNL---PVSQELIEELKIYFLSFDRP--GYGESDPHPLRTVKTEACDVEQLADK 127 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~---~~~~~l~~~~~~~vi~~D~~--G~G~S~~~~~~~~~~~~~dl~~~l~~ 127 (341)
.++|++++||.....-... .+...|.+. |..+...-++ |||.... ....++.+.+.+++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~-g~~~~~~~~p~~gH~~~~~---~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKA-GKPVELLIFPGEGHGFGNP---ENRRDWYERILDFFDK 208 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHT-TSSEEEEEETT-SSSTTSH---HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhc-CCCEEEEEcCcCCCCCCCc---hhHHHHHHHHHHHHHH
Confidence 4589999999865543332 455666654 6544444444 5543321 1222445555555543
No 292
>PF13728 TraF: F plasmid transfer operon protein
Probab=44.28 E-value=67 Score=25.04 Aligned_cols=43 Identities=7% Similarity=0.051 Sum_probs=35.4
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCC
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESD 107 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~ 107 (341)
..++|.-|.+.-.....+++..+++++|+.|+.++.=|.+...
T Consensus 123 gL~~F~~~~C~~C~~~~pil~~~~~~yg~~v~~vs~DG~~~~~ 165 (215)
T PF13728_consen 123 GLFFFYRSDCPYCQQQAPILQQFADKYGFSVIPVSLDGRPIPS 165 (215)
T ss_pred EEEEEEcCCCchhHHHHHHHHHHHHHhCCEEEEEecCCCCCcC
Confidence 3566667777767778899999999999999999998887664
No 293
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=43.80 E-value=1.1e+02 Score=23.76 Aligned_cols=37 Identities=8% Similarity=0.067 Sum_probs=24.3
Q ss_pred CceEEEEcCCCCCCCc--chhhHHHHHHhcCceEEEEcC
Q 038973 64 NHKIIIIHGFGSSKDL--NLPVSQELIEELKIYFLSFDR 100 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~--~~~~~~~l~~~~~~~vi~~D~ 100 (341)
++.|.|++=.+.+.+. |-.-.+...++.|..+...++
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeec
Confidence 4689999887776665 444344444556877776665
No 294
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=43.75 E-value=30 Score=30.56 Aligned_cols=55 Identities=13% Similarity=0.077 Sum_probs=36.8
Q ss_pred cEEEEEeecCCCCChHHHHHHHhhC------CC-cEEEEecCCCcccccC-HHHHHHHHHHHhh
Q 038973 285 SVHIWQGCEDRIIPSQINQFISEKL------PW-IQYHEVPDAGHLFIFE-RKFCEAIIRALLV 340 (341)
Q Consensus 285 Pvlii~g~~D~~~p~~~~~~~~~~~------~~-~~~~~~~~~gH~~~~e-p~~~~~~i~~fl~ 340 (341)
+++..+|-.|..+|.-..+.-.+.+ ++ ..+.+++ +||++..+ |+...+.+..|+.
T Consensus 427 kw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y~-aGHMvp~d~P~~~~~~~~~~~~ 489 (498)
T COG2939 427 KWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIYE-AGHMVPYDRPESSLEMVNLWIN 489 (498)
T ss_pred eEeeecchhhhcCCCcccccchhhcccccccCCceEEEEec-CcceeecCChHHHHHHHHHHHh
Confidence 3777777777777654443322222 23 3455565 89999998 9999999988864
No 295
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=43.22 E-value=36 Score=25.32 Aligned_cols=30 Identities=20% Similarity=-0.033 Sum_probs=22.1
Q ss_pred HHHHHhCCCCcEEEEEeccChHHHHHHHhhc
Q 038973 123 QLADKLQIGSKFYVIGISMGAYPVYGCLKYI 153 (341)
Q Consensus 123 ~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~ 153 (341)
..++..+. ..-.+.|-|.|+.++..++...
T Consensus 20 ~~L~~~~~-~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEAGI-PIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHcCC-CeeEEEEECHHHHHHHHHHcCC
Confidence 33444465 4568999999999999888653
No 296
>PRK10081 entericidin B membrane lipoprotein; Provisional
Probab=43.19 E-value=37 Score=18.93 Aligned_cols=11 Identities=18% Similarity=0.123 Sum_probs=6.9
Q ss_pred ChHHHHHHHHH
Q 038973 1 MFAPIAVALAV 11 (341)
Q Consensus 1 m~~~~~~~~~~ 11 (341)
|||+.+..+++
T Consensus 1 MmKk~i~~i~~ 11 (48)
T PRK10081 1 MVKKTIAAIFS 11 (48)
T ss_pred ChHHHHHHHHH
Confidence 77776665444
No 297
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=42.90 E-value=1.1e+02 Score=27.29 Aligned_cols=88 Identities=13% Similarity=0.098 Sum_probs=55.7
Q ss_pred EEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHH
Q 038973 69 IIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYG 148 (341)
Q Consensus 69 ~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~ 148 (341)
|--|++.+...-...+-+.+.+.||.|+.+|-.|.-.. -..+...+..+++.-.+ +.+..||.-+=|.=++.
T Consensus 443 fekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~-------~~~lm~~l~k~~~~~~p-d~i~~vgealvg~dsv~ 514 (587)
T KOG0781|consen 443 FEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHN-------NAPLMTSLAKLIKVNKP-DLILFVGEALVGNDSVD 514 (587)
T ss_pred HhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccC-------ChhHHHHHHHHHhcCCC-ceEEEehhhhhCcHHHH
Confidence 33455555443333333445556899999999875433 33456667778877777 78999999887776654
Q ss_pred HHhh---------ccccccceeeec
Q 038973 149 CLKY---------IPQRLAGASLVV 164 (341)
Q Consensus 149 ~a~~---------~p~~v~~~il~~ 164 (341)
-+.. .|..|+++++.-
T Consensus 515 q~~~fn~al~~~~~~r~id~~~ltk 539 (587)
T KOG0781|consen 515 QLKKFNRALADHSTPRLIDGILLTK 539 (587)
T ss_pred HHHHHHHHHhcCCCccccceEEEEe
Confidence 4322 244577777643
No 298
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=42.58 E-value=40 Score=27.39 Aligned_cols=36 Identities=33% Similarity=0.487 Sum_probs=26.9
Q ss_pred CcEEEEEeccChHHHHHHHh---hccccccceeeecccc
Q 038973 132 SKFYVIGISMGAYPVYGCLK---YIPQRLAGASLVVPFV 167 (341)
Q Consensus 132 ~~~~lvGhS~Gg~~a~~~a~---~~p~~v~~~il~~~~~ 167 (341)
.+++|.|.|+|+.-+...-. ..-+++++.+..+++.
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 58999999999887654322 2235799999999864
No 299
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=41.76 E-value=28 Score=28.14 Aligned_cols=22 Identities=18% Similarity=0.273 Sum_probs=14.9
Q ss_pred HHHHHhCCCCcEEEEEeccChH
Q 038973 123 QLADKLQIGSKFYVIGISMGAY 144 (341)
Q Consensus 123 ~~l~~l~~~~~~~lvGhS~Gg~ 144 (341)
.+.+.+.--..++++|||+|..
T Consensus 226 ~~~~~l~~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 226 SFFESLSDIDEIIIYGHSLGEV 247 (270)
T ss_pred HHHhhhcCCCEEEEEeCCCchh
Confidence 3344443227899999999975
No 300
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=41.64 E-value=66 Score=26.20 Aligned_cols=68 Identities=19% Similarity=0.227 Sum_probs=43.2
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCC--------CCCC-------CCCCCC-CccchHHHHHHHHHHh
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPG--------YGES-------DPHPLR-TVKTEACDVEQLADKL 128 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G--------~G~S-------~~~~~~-~~~~~~~dl~~~l~~l 128 (341)
|-|+|..|.++ ..++++.. ||.|+..|+-- .|.. ++..-| +.+.+.+.+.+.++.+
T Consensus 253 Pmi~fakG~g~-------~Le~l~~t-G~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~f 324 (359)
T KOG2872|consen 253 PMILFAKGSGG-------ALEELAQT-GYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDF 324 (359)
T ss_pred ceEEEEcCcch-------HHHHHHhc-CCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHh
Confidence 67788877654 34677766 99999999852 1111 111112 6667778888889988
Q ss_pred CCCCcEEEEEec
Q 038973 129 QIGSKFYVIGIS 140 (341)
Q Consensus 129 ~~~~~~~lvGhS 140 (341)
|...-+.=+||.
T Consensus 325 G~~ryI~NLGHG 336 (359)
T KOG2872|consen 325 GKSRYIANLGHG 336 (359)
T ss_pred CccceEEecCCC
Confidence 873334446775
No 301
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=41.32 E-value=83 Score=26.67 Aligned_cols=66 Identities=23% Similarity=0.270 Sum_probs=40.5
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEE
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIG 138 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvG 138 (341)
.+++.+.|.-.| .+...|..+.||.|+.+-+.-+.. +....-+..+-.+|...+.+.+|+ ++.++=
T Consensus 5 kV~v~mSGGVDS-----SVaA~lLk~QGyeViGl~m~~~~~-~~~~~C~s~~d~~da~~va~~LGI--p~~~vd 70 (356)
T COG0482 5 KVLVGMSGGVDS-----SVAAYLLKEQGYEVIGLFMKNWDE-DGGGGCCSEEDLRDAERVADQLGI--PLYVVD 70 (356)
T ss_pred EEEEEccCCHHH-----HHHHHHHHHcCCeEEEEEEEeecc-CCCCcCCchhHHHHHHHHHHHhCC--ceEEEc
Confidence 455555554333 355666677799999999887765 111122445556677778888876 444443
No 302
>PF03283 PAE: Pectinacetylesterase
Probab=40.63 E-value=91 Score=26.66 Aligned_cols=35 Identities=14% Similarity=0.098 Sum_probs=23.3
Q ss_pred CcEEEEEeccChHHHHHHH----hhccccccceeeeccc
Q 038973 132 SKFYVIGISMGAYPVYGCL----KYIPQRLAGASLVVPF 166 (341)
Q Consensus 132 ~~~~lvGhS~Gg~~a~~~a----~~~p~~v~~~il~~~~ 166 (341)
++++|.|.|.||.-++..+ ...|..++-..+.++.
T Consensus 156 ~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG 194 (361)
T PF03283_consen 156 KQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSG 194 (361)
T ss_pred ceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccc
Confidence 6899999999999887654 3455444444444443
No 303
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=40.31 E-value=35 Score=23.24 Aligned_cols=32 Identities=34% Similarity=0.451 Sum_probs=25.2
Q ss_pred EEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcC
Q 038973 67 IIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDR 100 (341)
Q Consensus 67 vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~ 100 (341)
+|++.|.++++.+ .++..|++++|+.++..|-
T Consensus 1 vI~I~G~~gsGKS--T~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPPGSGKS--TLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEESTTSSHH--HHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCCCCCHH--HHHHHHHHHHCCeEEEecc
Confidence 5788888888765 3567788877999998887
No 304
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=40.16 E-value=66 Score=23.77 Aligned_cols=71 Identities=17% Similarity=0.058 Sum_probs=41.3
Q ss_pred EEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCC-------CCCCCccchHHHHHHHHHHhCCCCcEEEEEec
Q 038973 68 IIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDP-------HPLRTVKTEACDVEQLADKLQIGSKFYVIGIS 140 (341)
Q Consensus 68 l~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~-------~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS 140 (341)
|++-|.|++...=..++.+|..++ +--.+-+|.--.|.. ..+|.++..- ...++.++. .-=+|+|.|
T Consensus 44 vl~cGNGgSaadAqHfaael~gRf--~~eR~~lpaIaLt~dsS~lTai~NDy~yd~vF---sRqveA~g~-~GDvLigIS 117 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGRF--EKERPSLPAIALSTDSSVLTAIANDYGYDEVF---SRQVEALGQ-PGDVLIGIS 117 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhHH--HhcCCCCCeeEeecccHHHhhhhccccHHHHH---HHHHHhcCC-CCCEEEEEe
Confidence 666788888877778888888753 344444444333311 1234444432 234445554 344889999
Q ss_pred cChH
Q 038973 141 MGAY 144 (341)
Q Consensus 141 ~Gg~ 144 (341)
.-|.
T Consensus 118 TSGN 121 (176)
T COG0279 118 TSGN 121 (176)
T ss_pred CCCC
Confidence 8885
No 305
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=39.72 E-value=1.2e+02 Score=20.63 Aligned_cols=75 Identities=19% Similarity=0.179 Sum_probs=47.4
Q ss_pred eEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChHH
Q 038973 66 KIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYP 145 (341)
Q Consensus 66 ~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~ 145 (341)
.||.-|| .-+......+..+.....-.+.++++. ++.+.+++.+.+.+.++.++.++.+.++-==.||..
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~--------~~~~~~~~~~~l~~~i~~~~~~~~vlil~Dl~ggsp 71 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLY--------PDESIEDFEEKLEEAIEELDEGDGVLILTDLGGGSP 71 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEET--------TTSCHHHHHHHHHHHHHHCCTTSEEEEEESSTTSHH
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECc--------CCCCHHHHHHHHHHHHHhccCCCcEEEEeeCCCCcc
Confidence 4677788 334445555566665411246677654 234788899999999988875456666666666655
Q ss_pred HHHHH
Q 038973 146 VYGCL 150 (341)
Q Consensus 146 a~~~a 150 (341)
....+
T Consensus 72 ~n~a~ 76 (116)
T PF03610_consen 72 FNEAA 76 (116)
T ss_dssp HHHHH
T ss_pred chHHH
Confidence 44443
No 306
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=39.37 E-value=71 Score=21.93 Aligned_cols=53 Identities=17% Similarity=0.246 Sum_probs=34.3
Q ss_pred EEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHh
Q 038973 68 IIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKL 128 (341)
Q Consensus 68 l~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l 128 (341)
|++||-+|++... ++..+++..++.++.+|..-...+ ...+..+.+..+++..
T Consensus 1 ill~G~~G~GKT~--l~~~la~~l~~~~~~i~~~~~~~~------~~~~~~~~i~~~~~~~ 53 (132)
T PF00004_consen 1 ILLHGPPGTGKTT--LARALAQYLGFPFIEIDGSELISS------YAGDSEQKIRDFFKKA 53 (132)
T ss_dssp EEEESSTTSSHHH--HHHHHHHHTTSEEEEEETTHHHTS------STTHHHHHHHHHHHHH
T ss_pred CEEECcCCCCeeH--HHHHHHhhcccccccccccccccc------cccccccccccccccc
Confidence 6889998887653 456677777888888888654421 3344455555555554
No 307
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=39.21 E-value=66 Score=24.21 Aligned_cols=61 Identities=11% Similarity=0.114 Sum_probs=35.9
Q ss_pred CCceEEEEcCCCCCCCc-ch-hhHHHHHHhcCceEEEEcCC--CCCCCCCCCCCCccchHHHHHHHH
Q 038973 63 ANHKIIIIHGFGSSKDL-NL-PVSQELIEELKIYFLSFDRP--GYGESDPHPLRTVKTEACDVEQLA 125 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~-~~-~~~~~l~~~~~~~vi~~D~~--G~G~S~~~~~~~~~~~~~dl~~~l 125 (341)
.++.+|++-|..++..+ -. .+...|.+. |++++..|=- -||.+. .-+++-++-.+.+..+.
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~-G~~~y~LDGDnvR~gL~~-dLgFs~edR~eniRRva 85 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAK-GYHVYLLDGDNVRHGLNR-DLGFSREDRIENIRRVA 85 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHc-CCeEEEecChhHhhcccC-CCCCChHHHHHHHHHHH
Confidence 35789999999887543 33 344455554 9999999832 234332 12345555555554443
No 308
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=39.02 E-value=41 Score=27.14 Aligned_cols=32 Identities=25% Similarity=0.098 Sum_probs=22.8
Q ss_pred HHHHHhCCCC-cEEEEEeccChHHHHHHHhhccc
Q 038973 123 QLADKLQIGS-KFYVIGISMGAYPVYGCLKYIPQ 155 (341)
Q Consensus 123 ~~l~~l~~~~-~~~lvGhS~Gg~~a~~~a~~~p~ 155 (341)
+.+...++ . .=.++|.|.|+.++..++...+.
T Consensus 18 ~al~e~~~-~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 18 DAFLEAGI-RPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHcCC-CCCCEEEEECHHHHhHHHHHhCCcc
Confidence 33344455 3 34899999999999998887544
No 309
>PRK14974 cell division protein FtsY; Provisional
Probab=38.89 E-value=2.2e+02 Score=24.16 Aligned_cols=65 Identities=9% Similarity=0.070 Sum_probs=42.9
Q ss_pred cCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhcc--ccccceeee
Q 038973 91 LKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIP--QRLAGASLV 163 (341)
Q Consensus 91 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p--~~v~~~il~ 163 (341)
.++.++.+|-.|.... -..+.+.+..+.+.... ..+++|.-+.-|.-+..-+..+. -.+.++|+.
T Consensus 221 ~~~DvVLIDTaGr~~~-------~~~lm~eL~~i~~~~~p-d~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 221 RGIDVVLIDTAGRMHT-------DANLMDELKKIVRVTKP-DLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred CCCCEEEEECCCccCC-------cHHHHHHHHHHHHhhCC-ceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 3678999999876542 34456667777777776 56777777777766665555432 256777765
No 310
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=38.58 E-value=60 Score=22.41 Aligned_cols=31 Identities=13% Similarity=0.050 Sum_probs=24.9
Q ss_pred chHHHHHHHHHHhCCCCcEEEEEeccChHHHH
Q 038973 116 TEACDVEQLADKLQIGSKFYVIGISMGAYPVY 147 (341)
Q Consensus 116 ~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~ 147 (341)
+....+.-.+..++. +.++++||+--|++..
T Consensus 44 ~~~~sl~~av~~l~v-~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGV-KHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCC-CEEEEEccCCCcHHHH
Confidence 466778888899999 8999999987776553
No 311
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=37.72 E-value=55 Score=24.67 Aligned_cols=32 Identities=13% Similarity=-0.045 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHhCCCCcEEEEEeccChHHHHHH
Q 038973 117 EACDVEQLADKLQIGSKFYVIGISMGAYPVYGC 149 (341)
Q Consensus 117 ~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~ 149 (341)
....++-.+.+|+. +.++++|||-=|.+...+
T Consensus 67 ~~asleyAv~~L~v-~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 67 CLSVLQYAVDVLKV-KHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred hhhhHHHHHHhcCC-CEEEEecCCCchHHHHHH
Confidence 45667778889999 899999999888776544
No 312
>PRK15219 carbonic anhydrase; Provisional
Probab=37.56 E-value=39 Score=26.92 Aligned_cols=32 Identities=9% Similarity=-0.109 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHhCCCCcEEEEEeccChHHHHHH
Q 038973 117 EACDVEQLADKLQIGSKFYVIGISMGAYPVYGC 149 (341)
Q Consensus 117 ~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~ 149 (341)
....|+-.+..|+. +.++|+|||-=|.+...+
T Consensus 129 ~~~slEyAv~~L~v-~~IvVlGHt~CGav~Aa~ 160 (245)
T PRK15219 129 LLGSMEFACAVAGA-KVVLVMGHTACGAVKGAI 160 (245)
T ss_pred hhhHHHHHHHHcCC-CEEEEecCCcchHHHHHH
Confidence 45568888899999 899999999877776544
No 313
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=37.09 E-value=33 Score=29.00 Aligned_cols=41 Identities=24% Similarity=0.443 Sum_probs=29.4
Q ss_pred CCCCCCceEccCCcEEEEEEccCCCC--------CCCceEEEEcCCCCC
Q 038973 36 PPVTSPRIKLSDGRHVAYREAGVPKE--------EANHKIIIIHGFGSS 76 (341)
Q Consensus 36 ~~~~~~~~~~~~g~~l~~~~~g~~~~--------~~~~~vl~~hG~~~~ 76 (341)
.+++.-.....||.++-|..+|.+.+ -++|.|.++|-+.+.
T Consensus 449 ~pFEkLkmSsDDG~r~LyLDFGg~dGEiqLDLhscpKpiVFIlHsfLSA 497 (506)
T KOG3551|consen 449 HPFEKLKMSSDDGARMLYLDFGGPDGEIQLDLHSCPKPIVFILHSFLSA 497 (506)
T ss_pred ChHHHhccccCCCceEEEEecCCCCccEEeeeccCCCcEEEEehhhhhh
Confidence 45566666677999999999996543 246777778887654
No 314
>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]
Probab=37.07 E-value=40 Score=28.86 Aligned_cols=87 Identities=14% Similarity=0.202 Sum_probs=51.2
Q ss_pred EEEccCCCCCCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCC
Q 038973 53 YREAGVPKEEANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGS 132 (341)
Q Consensus 53 ~~~~g~~~~~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~ 132 (341)
|+.|.......+..|+..--++.+...-..+++.|.+. |..|..+++.-. |..++++.+.. .
T Consensus 237 Y~~W~~~~~~~~V~l~Y~smyg~T~~ma~aiaegl~~~-gv~v~~~~~~~~----------------~~~eI~~~i~~-a 298 (388)
T COG0426 237 YRDWAEGQPKGKVDLIYDSMYGNTEKMAQAIAEGLMKE-GVDVEVINLEDA----------------DPSEIVEEILD-A 298 (388)
T ss_pred HHHHHccCCcceEEEEEecccCCHHHHHHHHHHHhhhc-CCceEEEEcccC----------------CHHHHHHHHhh-c
Confidence 55665544333345555555566655556677777766 888888887411 44455555444 5
Q ss_pred cEEEEEec---------cChHHHHHHHhhccccc
Q 038973 133 KFYVIGIS---------MGAYPVYGCLKYIPQRL 157 (341)
Q Consensus 133 ~~~lvGhS---------~Gg~~a~~~a~~~p~~v 157 (341)
+.+++|-+ ++..+....+...+.+.
T Consensus 299 ~~~vvGsPT~~~~~~p~i~~~l~~v~~~~~~~k~ 332 (388)
T COG0426 299 KGLVVGSPTINGGAHPPIQTALGYVLALAPKNKL 332 (388)
T ss_pred ceEEEecCcccCCCCchHHHHHHHHHhccCcCce
Confidence 77889988 34444444455555444
No 315
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=36.90 E-value=20 Score=27.10 Aligned_cols=34 Identities=18% Similarity=0.270 Sum_probs=22.8
Q ss_pred ceEEEEcCC---CCCCCcchhhHHHHHHhcCceEEEEc
Q 038973 65 HKIIIIHGF---GSSKDLNLPVSQELIEELKIYFLSFD 99 (341)
Q Consensus 65 ~~vl~~hG~---~~~~~~~~~~~~~l~~~~~~~vi~~D 99 (341)
..||++|.. ..+......+++.|.++ ||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~-Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEK-GYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHC-CCEEEEHH
Confidence 468899942 23344555777777776 99988764
No 316
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=36.90 E-value=2.2e+02 Score=22.87 Aligned_cols=39 Identities=13% Similarity=0.136 Sum_probs=29.2
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHhcCc-eEEEEcCCCC
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEELKI-YFLSFDRPGY 103 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~-~vi~~D~~G~ 103 (341)
.+.||++=-|...+.+.|...++.+.+. |- +|+.. .||.
T Consensus 121 tgkPVilk~G~~~t~~e~~~A~e~i~~~-Gn~~i~L~-eRg~ 160 (250)
T PRK13397 121 IDKPILFKRGLMATIEEYLGALSYLQDT-GKSNIILC-ERGV 160 (250)
T ss_pred cCCeEEEeCCCCCCHHHHHHHHHHHHHc-CCCeEEEE-cccc
Confidence 4578999999889999999999998875 54 34444 4444
No 317
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=36.65 E-value=69 Score=23.57 Aligned_cols=52 Identities=10% Similarity=0.131 Sum_probs=28.2
Q ss_pred cchHHHHHHHHHHhC-CCCcEEEEEeccChHHHHHHHhhccccccceeeeccc
Q 038973 115 KTEACDVEQLADKLQ-IGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPF 166 (341)
Q Consensus 115 ~~~~~dl~~~l~~l~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~ 166 (341)
++..+++.++++.+. .++++++.|-|..|...+.++...++.|..++=.++.
T Consensus 51 ~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np~ 103 (160)
T PF08484_consen 51 EQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNPL 103 (160)
T ss_dssp HHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-GG
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCChh
Confidence 334444555554442 2368999999999999999888767777777766653
No 318
>PLN02154 carbonic anhydrase
Probab=35.31 E-value=1.1e+02 Score=25.07 Aligned_cols=32 Identities=19% Similarity=0.076 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHhCCCCcEEEEEeccChHHHHHH
Q 038973 117 EACDVEQLADKLQIGSKFYVIGISMGAYPVYGC 149 (341)
Q Consensus 117 ~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~ 149 (341)
....|+-.+.+++. +.++|+|||-=|.+...+
T Consensus 152 ~~aslEyAv~~L~v-~~IvV~GHs~CGAV~Aal 183 (290)
T PLN02154 152 TNSALEFAVTTLQV-ENIIVMGHSNCGGIAALM 183 (290)
T ss_pred hhhHHHHHHHHhCC-CEEEEecCCCchHHHHHH
Confidence 45568888899999 899999999777665544
No 319
>PRK00091 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed
Probab=35.12 E-value=1.6e+02 Score=24.54 Aligned_cols=71 Identities=21% Similarity=0.205 Sum_probs=41.6
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCC------CCCCCC------------------CCCCCccchHHH
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPG------YGESDP------------------HPLRTVKTEACD 120 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G------~G~S~~------------------~~~~~~~~~~~d 120 (341)
+.++++-|-.+++.+ .++..|+++++..++..|-.= +|...+ ...++..++.++
T Consensus 4 ~~~i~i~GptgsGKt--~la~~la~~~~~~iis~Ds~Qvy~~l~i~Takp~~~E~~gv~hhlid~~~~~~~~s~~~f~~~ 81 (307)
T PRK00091 4 PKVIVIVGPTASGKT--ALAIELAKRLNGEIISADSMQVYRGMDIGTAKPTAEERAGVPHHLIDILDPTESYSVADFQRD 81 (307)
T ss_pred ceEEEEECCCCcCHH--HHHHHHHHhCCCcEEeccccceeecccccCCCCCHHHHcCccEEeecccChhhcccHHHHHHH
Confidence 467888887777654 455677777777788887631 111111 112466677777
Q ss_pred HHHHHHHh-CCCCcEEEE
Q 038973 121 VEQLADKL-QIGSKFYVI 137 (341)
Q Consensus 121 l~~~l~~l-~~~~~~~lv 137 (341)
....++.. ..+..++++
T Consensus 82 a~~~i~~i~~~gk~pIlv 99 (307)
T PRK00091 82 ALAAIADILARGKLPILV 99 (307)
T ss_pred HHHHHHHHHhCCCCEEEE
Confidence 77777754 222344555
No 320
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=34.75 E-value=97 Score=23.96 Aligned_cols=58 Identities=21% Similarity=0.233 Sum_probs=31.4
Q ss_pred CceEEEEcCCCCCCCcch--hhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHH
Q 038973 64 NHKIIIIHGFGSSKDLNL--PVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADK 127 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~~~--~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~ 127 (341)
+.+|+++||-....--+. .-.....++.+.+|-.-.++|-|.+ ...+..+++.++++.
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~------i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHE------ISPEELRDLREFLEK 214 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS--------HHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCC------CCHHHHHHHHHHHhh
Confidence 468999999987754432 2333333444666666666666554 234556667766654
No 321
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=34.65 E-value=2.2e+02 Score=22.09 Aligned_cols=83 Identities=13% Similarity=0.081 Sum_probs=45.9
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHhc-CceEEEEcCCCCCCCCCCC-----------CCCccchHHH-----HHHHH
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEEL-KIYFLSFDRPGYGESDPHP-----------LRTVKTEACD-----VEQLA 125 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~-~~~vi~~D~~G~G~S~~~~-----------~~~~~~~~~d-----l~~~l 125 (341)
.++.|++++=.......|.........+. |+.+...+... ..+... +.+...+.+. +.+++
T Consensus 30 ~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~GG~~~~~~~~l~~~~l~~~l 107 (212)
T cd03146 30 ARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGGGNTFNLLAQWREHGLDAIL 107 (212)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECCchHHHHHHHHHHcCHHHHH
Confidence 35689999877665545554455555667 88888877654 111000 1111122221 23333
Q ss_pred HHhCCCCcEEEEEeccChHHHHH
Q 038973 126 DKLQIGSKFYVIGISMGAYPVYG 148 (341)
Q Consensus 126 ~~l~~~~~~~lvGhS~Gg~~a~~ 148 (341)
+..-. +...++|.|.|+.+...
T Consensus 108 ~~~~~-~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 108 KAALE-RGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHH-CCCEEEEECHhHHhhCC
Confidence 33222 45789999999988765
No 322
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=34.49 E-value=68 Score=26.75 Aligned_cols=19 Identities=21% Similarity=0.277 Sum_probs=16.2
Q ss_pred EEEEeccChHHHHHHHhhc
Q 038973 135 YVIGISMGAYPVYGCLKYI 153 (341)
Q Consensus 135 ~lvGhS~Gg~~a~~~a~~~ 153 (341)
.+.|.|+||.+|+.++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5779999999999998744
No 323
>COG0324 MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis]
Probab=34.23 E-value=1.8e+02 Score=24.19 Aligned_cols=75 Identities=19% Similarity=0.161 Sum_probs=47.2
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEc----CCCCC-CCCCC-------------------CCCCccchHHH
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFD----RPGYG-ESDPH-------------------PLRTVKTEACD 120 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D----~~G~G-~S~~~-------------------~~~~~~~~~~d 120 (341)
+.++++-|-..++.+- +.-.|++++|-.||..| ++|.. .|.++ ..++..++.++
T Consensus 3 ~~~i~I~GPTAsGKT~--lai~LAk~~~~eIIs~DSmQvYr~mdIGTAKps~~e~~~vpHhliDi~~p~e~ysa~~f~~~ 80 (308)
T COG0324 3 PKLIVIAGPTASGKTA--LAIALAKRLGGEIISLDSMQVYRGLDIGTAKPSLEELAGVPHHLIDIRDPTESYSAAEFQRD 80 (308)
T ss_pred ccEEEEECCCCcCHHH--HHHHHHHHcCCcEEecchhhhcCCCcccCCCCCHHHHcCCCEEEecccCccccccHHHHHHH
Confidence 5677777777766553 44578888888899999 34432 11121 13567777888
Q ss_pred HHHHHHHhCC-CCcEEEEEecc
Q 038973 121 VEQLADKLQI-GSKFYVIGISM 141 (341)
Q Consensus 121 l~~~l~~l~~-~~~~~lvGhS~ 141 (341)
....++.... ++-.++||-|+
T Consensus 81 a~~~i~~i~~rgk~pIlVGGTg 102 (308)
T COG0324 81 ALAAIDDILARGKLPILVGGTG 102 (308)
T ss_pred HHHHHHHHHhCCCCcEEEccHH
Confidence 8877776632 24567777553
No 324
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=33.94 E-value=53 Score=25.93 Aligned_cols=32 Identities=13% Similarity=0.025 Sum_probs=22.6
Q ss_pred HHHHHhCCC-CcEEEEEeccChHHHHHHHhhcc
Q 038973 123 QLADKLQIG-SKFYVIGISMGAYPVYGCLKYIP 154 (341)
Q Consensus 123 ~~l~~l~~~-~~~~lvGhS~Gg~~a~~~a~~~p 154 (341)
+.+...++. +.-.+.|-|.|+.++..++...+
T Consensus 19 ~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 19 SLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 334444551 13479999999999999988644
No 325
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=33.57 E-value=1.6e+02 Score=20.27 Aligned_cols=72 Identities=18% Similarity=0.189 Sum_probs=45.3
Q ss_pred eEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChHH
Q 038973 66 KIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYP 145 (341)
Q Consensus 66 ~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~ 145 (341)
.||.-|| .-+......+..+.... -.+.++++. .+.+.+++.+.+.++++..+.++.+.++-==+||..
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G~~-~~i~~~~~~--------~~~~~~~~~~~i~~~i~~~~~~~~viil~Dl~GGSp 71 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILGEQ-ENVEAIDFP--------PGESPDDLLEKIKAALAELDSGEGVLILTDLFGGSP 71 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcCCC-CCeEEEEeC--------CCCCHHHHHHHHHHHHHHhCCCCcEEEEEeCCCCCH
Confidence 5677788 33344445555555432 247777764 234688889999999998865356666665567776
Q ss_pred HHH
Q 038973 146 VYG 148 (341)
Q Consensus 146 a~~ 148 (341)
...
T Consensus 72 ~n~ 74 (122)
T cd00006 72 NNA 74 (122)
T ss_pred HHH
Confidence 543
No 326
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=33.22 E-value=36 Score=26.66 Aligned_cols=34 Identities=21% Similarity=0.333 Sum_probs=24.8
Q ss_pred ceEEEEcCC-CCCCCcchhhHHHHHHhcCceEEEEc
Q 038973 65 HKIIIIHGF-GSSKDLNLPVSQELIEELKIYFLSFD 99 (341)
Q Consensus 65 ~~vl~~hG~-~~~~~~~~~~~~~l~~~~~~~vi~~D 99 (341)
..||++|.. ..+......+++.|.++ ||+++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~~-Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKEQ-GYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHC-CCEEEEhH
Confidence 468888974 34455666788888776 99988775
No 327
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=33.01 E-value=36 Score=27.62 Aligned_cols=34 Identities=12% Similarity=0.062 Sum_probs=25.6
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEc
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFD 99 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D 99 (341)
..||++|....+......++..|.++ ||+++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~k-Gy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEK-GYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHC-CCEEEeHH
Confidence 46889997766666666778888776 99988764
No 328
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=32.66 E-value=76 Score=24.58 Aligned_cols=36 Identities=11% Similarity=-0.065 Sum_probs=29.3
Q ss_pred cchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHh
Q 038973 115 KTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLK 151 (341)
Q Consensus 115 ~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~ 151 (341)
.+....++-.+..|+. +.++|+||+-=|++...+..
T Consensus 76 ~~~l~sleyAv~~L~v-~~IiV~GH~~CGav~aa~~~ 111 (207)
T COG0288 76 GSVLRSLEYAVYVLGV-KEIIVCGHTDCGAVKAALDD 111 (207)
T ss_pred cchhHHHHHHHHHcCC-CEEEEecCCCcHHHHhcccc
Confidence 5667778888999999 89999999988887765443
No 329
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=32.56 E-value=1.4e+02 Score=23.74 Aligned_cols=38 Identities=21% Similarity=0.137 Sum_probs=23.9
Q ss_pred CceEEEEcCCCCC--CCcchhhHHHHHHhcCceEEEEcCC
Q 038973 64 NHKIIIIHGFGSS--KDLNLPVSQELIEELKIYFLSFDRP 101 (341)
Q Consensus 64 ~~~vl~~hG~~~~--~~~~~~~~~~l~~~~~~~vi~~D~~ 101 (341)
++.|+||+=.... ...|........++.|+.|..++..
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 4689999876633 3334433444445568888888765
No 330
>PLN03019 carbonic anhydrase
Probab=32.21 E-value=1e+02 Score=25.75 Aligned_cols=33 Identities=18% Similarity=0.022 Sum_probs=26.1
Q ss_pred chHHHHHHHHHHhCCCCcEEEEEeccChHHHHHH
Q 038973 116 TEACDVEQLADKLQIGSKFYVIGISMGAYPVYGC 149 (341)
Q Consensus 116 ~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~ 149 (341)
.....|+-.+.+++. +.|+|+|||-=|.+...+
T Consensus 200 ~v~aSIEYAV~~L~V-~~IVV~GHs~CGaVkAal 232 (330)
T PLN03019 200 GVGAAIEYAVLHLKV-ENIVVIGHSACGGIKGLM 232 (330)
T ss_pred ccchhHHHHHHHhCC-CEEEEecCCCchHHHHHH
Confidence 345678888999999 899999999777665543
No 331
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=31.88 E-value=51 Score=27.19 Aligned_cols=30 Identities=17% Similarity=0.010 Sum_probs=22.2
Q ss_pred HhCCCCcEEEEEeccChHHHHHHHhhccccc
Q 038973 127 KLQIGSKFYVIGISMGAYPVYGCLKYIPQRL 157 (341)
Q Consensus 127 ~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v 157 (341)
..++ .+-++.|.|.|+.+|..++....+.+
T Consensus 93 e~~l-~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 93 EQDL-LPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HcCC-CCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 3455 45679999999999999887644333
No 332
>PHA02114 hypothetical protein
Probab=31.07 E-value=84 Score=20.61 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=28.0
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEc
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFD 99 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D 99 (341)
.+||+=-.+..+..-|-.++.+|.+. ||.|++-.
T Consensus 83 gtivldvn~amsr~pwi~v~s~le~~-g~~vvatq 116 (127)
T PHA02114 83 GTIVLDVNYAMSRAPWIKVISRLEEA-GFNVVATQ 116 (127)
T ss_pred CeEEEEehhhhccCcHHHHHHHHHhc-Cceeeehh
Confidence 47888778888999999999999765 99998753
No 333
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=30.62 E-value=42 Score=29.48 Aligned_cols=38 Identities=13% Similarity=-0.010 Sum_probs=23.8
Q ss_pred EEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCCCccccc
Q 038973 286 VHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDAGHLFIF 326 (341)
Q Consensus 286 vlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 326 (341)
+++++|+.|+......... .-+.....+++|++|+.-+
T Consensus 379 viFtNG~~DPW~~lgv~~~---~~~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 379 VIFTNGELDPWRALGVTSD---SSDSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp EEEEEETT-CCGGGS--S----SSSSEEEEEETT--TTGGG
T ss_pred EEeeCCCCCCcccccCCCC---CCCCcccEEECCCeeeccc
Confidence 9999999999976652221 2234566789999997654
No 334
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=30.40 E-value=2.5e+02 Score=24.76 Aligned_cols=64 Identities=9% Similarity=0.042 Sum_probs=41.2
Q ss_pred CceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccc--cccceeee
Q 038973 92 KIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQ--RLAGASLV 163 (341)
Q Consensus 92 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~~il~ 163 (341)
+|.++.+|-+|.-.. -+.+.+.+..+.+.... ..+++|--++-|.-+...+..+-+ .+.++|+-
T Consensus 182 ~~DvViIDTaGr~~~-------d~~lm~El~~i~~~~~p-~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 182 NFDIIIVDTSGRHKQ-------EDSLFEEMLQVAEAIQP-DNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred CCCEEEEECCCCCcc-------hHHHHHHHHHHhhhcCC-cEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 688999999975322 23455666666666666 567777777777666655555432 35666654
No 335
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=29.77 E-value=86 Score=22.98 Aligned_cols=35 Identities=17% Similarity=0.268 Sum_probs=22.8
Q ss_pred CceEEEEcCCCCCCCcc-h-hhHHHHHHhcCceEEEEc
Q 038973 64 NHKIIIIHGFGSSKDLN-L-PVSQELIEELKIYFLSFD 99 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~~-~-~~~~~l~~~~~~~vi~~D 99 (341)
++.+|++-|..++...- . .+...|.+. |+.++.+|
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~-g~~~~~LD 37 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFAR-GIKVYLLD 37 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHT-TS-EEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHc-CCcEEEec
Confidence 36899999999886542 2 344445444 88899988
No 336
>PLN03014 carbonic anhydrase
Probab=29.58 E-value=1.3e+02 Score=25.48 Aligned_cols=32 Identities=19% Similarity=0.034 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHhCCCCcEEEEEeccChHHHHHH
Q 038973 117 EACDVEQLADKLQIGSKFYVIGISMGAYPVYGC 149 (341)
Q Consensus 117 ~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~ 149 (341)
....|+-.+.+++. +.++|+|||-=|.+...+
T Consensus 206 v~asLEYAV~~L~V-~~IVV~GHs~CGaV~Aa~ 237 (347)
T PLN03014 206 VGAAIEYAVLHLKV-ENIVVIGHSACGGIKGLM 237 (347)
T ss_pred chhHHHHHHHHhCC-CEEEEeCCCCchHHHHHH
Confidence 45678888899999 899999999777665443
No 337
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.47 E-value=90 Score=25.84 Aligned_cols=36 Identities=22% Similarity=0.115 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHhCC---CCcEEEEEec--cChHHHHHHHhh
Q 038973 117 EACDVEQLADKLQI---GSKFYVIGIS--MGAYPVYGCLKY 152 (341)
Q Consensus 117 ~~~dl~~~l~~l~~---~~~~~lvGhS--~Gg~~a~~~a~~ 152 (341)
-+..+.+++++.++ ++++.++|.| ||..++..+...
T Consensus 142 Tp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 142 TPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred cHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 35667888888764 4789999997 999999888754
No 338
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=29.41 E-value=1e+02 Score=16.60 Aligned_cols=31 Identities=13% Similarity=0.225 Sum_probs=21.3
Q ss_pred eEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEE
Q 038973 94 YFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVI 137 (341)
Q Consensus 94 ~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lv 137 (341)
+|..+|+-||+ -.++|..+++.++. ++++++
T Consensus 8 ~v~~~~fSgHa------------d~~~L~~~i~~~~p-~~vilV 38 (43)
T PF07521_consen 8 RVEQIDFSGHA------------DREELLEFIEQLNP-RKVILV 38 (43)
T ss_dssp EEEESGCSSS-------------BHHHHHHHHHHHCS-SEEEEE
T ss_pred EEEEEeecCCC------------CHHHHHHHHHhcCC-CEEEEe
Confidence 46677766665 35788889998876 666655
No 339
>PLN00416 carbonate dehydratase
Probab=29.29 E-value=93 Score=25.10 Aligned_cols=33 Identities=21% Similarity=0.045 Sum_probs=26.2
Q ss_pred chHHHHHHHHHHhCCCCcEEEEEeccChHHHHHH
Q 038973 116 TEACDVEQLADKLQIGSKFYVIGISMGAYPVYGC 149 (341)
Q Consensus 116 ~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~ 149 (341)
.....|+-.+.+|+. +.|+|+|||-=|.+...+
T Consensus 125 ~~~asLEyAv~~L~V-~~IVV~GHs~CGaV~Aa~ 157 (258)
T PLN00416 125 GVGAAVEYAVVHLKV-ENILVIGHSCCGGIKGLM 157 (258)
T ss_pred cchhHHHHHHHHhCC-CEEEEecCCCchHHHHHH
Confidence 355678888899999 899999999877765544
No 340
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=29.11 E-value=1.1e+02 Score=27.91 Aligned_cols=100 Identities=9% Similarity=0.143 Sum_probs=52.6
Q ss_pred CCceEEEEcCCCCCCCcchhhHH------HHHH-hcCceEEEEcCC----CCCCCCCCCCC----CccchHHHHHHHHHH
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQ------ELIE-ELKIYFLSFDRP----GYGESDPHPLR----TVKTEACDVEQLADK 127 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~------~l~~-~~~~~vi~~D~~----G~G~S~~~~~~----~~~~~~~dl~~~l~~ 127 (341)
.+-++=+-=|.+.+......+.. .|+. +-|=.|+.-.-- -+|.-+.+... ....+...|.+.+..
T Consensus 257 ~~ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d~i~e 336 (655)
T COG3887 257 KNIPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSDIIKE 336 (655)
T ss_pred cCcceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHHHHhh
Confidence 34566666677766555543321 1221 113335444322 23433222211 233444445555544
Q ss_pred hCCCCcEEEEEe------ccChHHHHHHHhhccccccceeeeccc
Q 038973 128 LQIGSKFYVIGI------SMGAYPVYGCLKYIPQRLAGASLVVPF 166 (341)
Q Consensus 128 l~~~~~~~lvGh------S~Gg~~a~~~a~~~p~~v~~~il~~~~ 166 (341)
. ++++++|| +.|+.+++..-+..-++ .+.++++|.
T Consensus 337 --~-d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 337 --S-DNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred --c-CcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 3 79999999 68999987655443333 667777764
No 341
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=28.52 E-value=82 Score=25.11 Aligned_cols=20 Identities=25% Similarity=0.162 Sum_probs=17.7
Q ss_pred EEEEeccChHHHHHHHhhcc
Q 038973 135 YVIGISMGAYPVYGCLKYIP 154 (341)
Q Consensus 135 ~lvGhS~Gg~~a~~~a~~~p 154 (341)
.+.|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999988653
No 342
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=28.22 E-value=57 Score=20.45 Aligned_cols=22 Identities=27% Similarity=0.147 Sum_probs=17.5
Q ss_pred CcEEEEEeccChHHHHHHHhhc
Q 038973 132 SKFYVIGISMGAYPVYGCLKYI 153 (341)
Q Consensus 132 ~~~~lvGhS~Gg~~a~~~a~~~ 153 (341)
+++-++|-|.|=.+|.+.+..+
T Consensus 40 K~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 40 KKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp SEEEEES-SSHHHHHHHHHHHH
T ss_pred ceEEEEecCCcccHHHHHHHHh
Confidence 7899999999988887777654
No 343
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=28.20 E-value=1.5e+02 Score=22.56 Aligned_cols=33 Identities=15% Similarity=-0.007 Sum_probs=26.3
Q ss_pred chHHHHHHHHHHhCCCCcEEEEEeccChHHHHHH
Q 038973 116 TEACDVEQLADKLQIGSKFYVIGISMGAYPVYGC 149 (341)
Q Consensus 116 ~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~ 149 (341)
.....|+-.+.+++. +.++++|||-=|.+...+
T Consensus 72 ~~~asleyav~~l~v-~~ivV~GH~~Cgav~Aa~ 104 (190)
T cd00884 72 GTSAAIEYAVAVLKV-EHIVVCGHSDCGGIRALL 104 (190)
T ss_pred chhhhHHHHHHHhCC-CEEEEeCCCcchHHHHHh
Confidence 356678888899999 899999999877766544
No 344
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=27.93 E-value=1.2e+02 Score=22.81 Aligned_cols=60 Identities=13% Similarity=0.138 Sum_probs=31.3
Q ss_pred CceEEEEcCCCCC---CCcchhhHHHHHHhcCceEEEEcCCCC---CCCCCCCCCCccchHHHHHHHH
Q 038973 64 NHKIIIIHGFGSS---KDLNLPVSQELIEELKIYFLSFDRPGY---GESDPHPLRTVKTEACDVEQLA 125 (341)
Q Consensus 64 ~~~vl~~hG~~~~---~~~~~~~~~~l~~~~~~~vi~~D~~G~---G~S~~~~~~~~~~~~~dl~~~l 125 (341)
+.++|+++-.... .......+..|.+. |+.|+-+. +|+ |+.......+++++++.+...+
T Consensus 113 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~-G~~vi~p~-~g~la~~~~g~g~~~~~~~i~~~v~~~~ 178 (182)
T PRK07313 113 TTPKLIAPAMNTKMYENPATQRNLKTLKED-GVQEIEPK-EGLLACGDEGYGALADIETILETIENTL 178 (182)
T ss_pred CCCEEEEECCCHHHhcCHHHHHHHHHHHHC-CCEEECCC-CCccccCCccCCCCCCHHHHHHHHHHHh
Confidence 4577777743221 22233556677654 87666665 344 4443333335666665555544
No 345
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=27.69 E-value=2.4e+02 Score=23.04 Aligned_cols=50 Identities=14% Similarity=0.198 Sum_probs=31.7
Q ss_pred CCccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecC-CCcccccC--HHHHHHHHHH
Q 038973 282 NEGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPD-AGHLFIFE--RKFCEAIIRA 337 (341)
Q Consensus 282 i~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e--p~~~~~~i~~ 337 (341)
..+||.++.|++ ...++..+.+|+++.+.++. .|++--.. |++..+.|.+
T Consensus 146 ~gVPV~lVsGDd------~~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~ 198 (270)
T cd08769 146 FGVPVVLVAGDS------ELEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELRE 198 (270)
T ss_pred cCCCEEEEecCH------HHHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHH
Confidence 445699999965 34456667779998887774 44333322 6666555554
No 346
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=27.64 E-value=1.2e+02 Score=21.86 Aligned_cols=34 Identities=12% Similarity=0.041 Sum_probs=24.9
Q ss_pred cchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHH
Q 038973 115 KTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGC 149 (341)
Q Consensus 115 ~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~ 149 (341)
.+....+.-.+..++. +.++++||+-=|.+...+
T Consensus 39 ~~~~~sle~av~~l~v-~~IiV~gHt~CGa~~~~~ 72 (153)
T PF00484_consen 39 DSALASLEYAVYHLGV-KEIIVCGHTDCGAIKAAL 72 (153)
T ss_dssp HHHHHHHHHHHHTST--SEEEEEEETT-HHHHHHH
T ss_pred cchhhheeeeeecCCC-CEEEEEcCCCchHHHHHH
Confidence 4455667777888899 899999999988887443
No 347
>PLN02200 adenylate kinase family protein
Probab=27.31 E-value=1.3e+02 Score=23.75 Aligned_cols=35 Identities=20% Similarity=0.163 Sum_probs=24.1
Q ss_pred CCCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEE
Q 038973 62 EANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSF 98 (341)
Q Consensus 62 ~~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~ 98 (341)
...|.+|++.|.++++.. .++..|++++|+..+..
T Consensus 40 ~~~~~ii~I~G~PGSGKs--T~a~~La~~~g~~his~ 74 (234)
T PLN02200 40 EKTPFITFVLGGPGSGKG--TQCEKIVETFGFKHLSA 74 (234)
T ss_pred CCCCEEEEEECCCCCCHH--HHHHHHHHHhCCeEEEc
Confidence 345778999999988764 34466777777655544
No 348
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=26.60 E-value=4.2e+02 Score=22.81 Aligned_cols=72 Identities=13% Similarity=0.216 Sum_probs=43.8
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHhcCc-eEEEEcCCCCCCCCCCC--CCCccchHHHHHHHHHHhCCCCcEEE-EE
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEELKI-YFLSFDRPGYGESDPHP--LRTVKTEACDVEQLADKLQIGSKFYV-IG 138 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~-~vi~~D~~G~G~S~~~~--~~~~~~~~~dl~~~l~~l~~~~~~~l-vG 138 (341)
.+.||++--|...+.+.|..-++.+... |- .++..+ | |-|..+. ..++ -...+..+-+..+. ++++ -.
T Consensus 224 ~gkPVilk~G~~~t~~e~~~Ave~i~~~-Gn~~i~L~e-r--g~s~yp~~~~~~l--dl~~i~~lk~~~~~--PV~~d~~ 295 (360)
T PRK12595 224 VNKPVLLKRGLSATIEEFIYAAEYIMSQ-GNGQIILCE-R--GIRTYEKATRNTL--DISAVPILKQETHL--PVMVDVT 295 (360)
T ss_pred cCCcEEEeCCCCCCHHHHHHHHHHHHHC-CCCCEEEEC-C--ccCCCCCCCCCCc--CHHHHHHHHHHhCC--CEEEeCC
Confidence 4568999999999999999888888765 43 354443 3 3333221 1122 12223333333454 6777 79
Q ss_pred eccC
Q 038973 139 ISMG 142 (341)
Q Consensus 139 hS~G 142 (341)
||.|
T Consensus 296 Hs~G 299 (360)
T PRK12595 296 HSTG 299 (360)
T ss_pred CCCc
Confidence 9988
No 349
>PF01171 ATP_bind_3: PP-loop family; InterPro: IPR011063 This entry represents the PP-loop motif superfamily [,]. The PP-loop motif appears to be a modified version of the P-loop of nucleotide binding domain that is involved in phosphate binding []. Named PP-motif, since it appears to be a part of a previously uncharacterised ATP pyrophophatase domain. ATP sulfurylases, Escherichia coli NtrL, and Bacillus subtilis OutB consist of this domain alone. In other proteins, the pyrophosphatase domain is associated with amidotransferase domains (type I or type II), a putative citrulline-aspartate ligase domain or a nitrilase/amidase domain.; PDB: 3A2K_A 2E89_B 2E21_D 1WY5_B 1NI5_A.
Probab=26.57 E-value=2.8e+02 Score=20.76 Aligned_cols=79 Identities=14% Similarity=0.153 Sum_probs=43.7
Q ss_pred EEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHH-----HHHHHhCCCCcEEEEEecc
Q 038973 67 IIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVE-----QLADKLQIGSKFYVIGISM 141 (341)
Q Consensus 67 vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~-----~~l~~l~~~~~~~lvGhS~ 141 (341)
+-+=||+...+..+...+..+.+.+|+..+..+..- ......+.+..+..+. ++....+ -..+++||-.
T Consensus 33 ~~vdh~~~~~s~~~~~~v~~~~~~~~i~~~~~~~~~----~~~~~~~~e~~aR~~Ry~~l~~~a~~~g--~~~i~~GHh~ 106 (182)
T PF01171_consen 33 VHVDHGLREESDEEAEFVEEICEQLGIPLYIVRIDE----DRKKGSNIEECARELRYQFLREIAKEEG--CNKIALGHHL 106 (182)
T ss_dssp EEEE-STSCCHHHHHHHHHHHHHHTT-EEEEEE--C----HCCTTSTCHHHHHHHHHHHHHHHHHTTT---CEEE---BH
T ss_pred EEEecCCCcccchhHHHHHHHHHhcCCceEEEEeee----eecccCCHHHHHHHHHHHHHHHhhhccc--ccceeecCcC
Confidence 444488887777777888888888887666655543 1111234555555443 3333344 3688999998
Q ss_pred ChHHHHHHHh
Q 038973 142 GAYPVYGCLK 151 (341)
Q Consensus 142 Gg~~a~~~a~ 151 (341)
-=.+-..+..
T Consensus 107 dD~~ET~l~~ 116 (182)
T PF01171_consen 107 DDQAETFLMN 116 (182)
T ss_dssp HHHHHHHHHH
T ss_pred CccHHHHHHH
Confidence 8776655543
No 350
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=26.48 E-value=1.9e+02 Score=26.31 Aligned_cols=37 Identities=14% Similarity=0.224 Sum_probs=26.1
Q ss_pred CCceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCC
Q 038973 63 ANHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRP 101 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~ 101 (341)
..|.||++.|.++++.+- ++..++...||.++..|..
T Consensus 367 ~~p~LVil~G~pGSGKST--~A~~l~~~~g~~~vn~D~l 403 (526)
T TIGR01663 367 APCEMVIAVGFPGAGKSH--FCKKFFQPAGYKHVNADTL 403 (526)
T ss_pred CCceEEEEECCCCCCHHH--HHHHHHHHcCCeEECcHHH
Confidence 457899999999886542 3345555568888877764
No 351
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=26.43 E-value=66 Score=26.76 Aligned_cols=20 Identities=25% Similarity=0.429 Sum_probs=17.3
Q ss_pred CcEEEEEeccChHHHHHHHh
Q 038973 132 SKFYVIGISMGAYPVYGCLK 151 (341)
Q Consensus 132 ~~~~lvGhS~Gg~~a~~~a~ 151 (341)
++.++.|||+|=+.|+..+.
T Consensus 85 ~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 85 KPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCceeecccHhHHHHHHHcc
Confidence 78899999999998887765
No 352
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=26.02 E-value=3.5e+02 Score=23.65 Aligned_cols=98 Identities=15% Similarity=0.131 Sum_probs=54.1
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCC----CC---CccchHHHHHHHHHHhCCCCcEEEE
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHP----LR---TVKTEACDVEQLADKLQIGSKFYVI 137 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~----~~---~~~~~~~dl~~~l~~l~~~~~~~lv 137 (341)
..++++---.+..+.-.+..+.+.+. +.-|+-.|..++-.--... .+ .++.+++++...... +.....+|.
T Consensus 49 ~~villSd~~G~~d~~~s~a~al~~~-~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~-g~yr~PVl~ 126 (456)
T COG3946 49 GLVILLSDEAGIGDQERSRADALLAR-GALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADL-GVYRLPVLT 126 (456)
T ss_pred eeeEEEEcccChhhhhcchhHHHhhc-CCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhc-cCcccceEe
Confidence 35555544344444444455666655 7778888877653322111 12 334444443333222 222466888
Q ss_pred EeccChHHHHHHHhhccc-cccceeeec
Q 038973 138 GISMGAYPVYGCLKYIPQ-RLAGASLVV 164 (341)
Q Consensus 138 GhS~Gg~~a~~~a~~~p~-~v~~~il~~ 164 (341)
|---||.+++..+++-|+ .+.+.+-+.
T Consensus 127 g~g~Gg~~A~asaaqSp~atlag~Vsld 154 (456)
T COG3946 127 GPGQGGTLAYASAAQSPDATLAGAVSLD 154 (456)
T ss_pred ecCCCcHHHHHHHhhChhhhhcCccCCC
Confidence 999999999998887765 344444433
No 353
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=25.96 E-value=60 Score=25.90 Aligned_cols=23 Identities=22% Similarity=0.319 Sum_probs=18.1
Q ss_pred EEEEeccChHHHHHHHhhcccccc
Q 038973 135 YVIGISMGAYPVYGCLKYIPQRLA 158 (341)
Q Consensus 135 ~lvGhS~Gg~~a~~~a~~~p~~v~ 158 (341)
.+.|-|.|+.++..++. .|+++.
T Consensus 34 ~i~GtSaGAl~aa~~a~-~~~~~~ 56 (246)
T cd07222 34 RFAGASAGSLVAAVLLT-APEKIE 56 (246)
T ss_pred EEEEECHHHHHHHHHhc-ChHHHH
Confidence 79999999999999984 344443
No 354
>COG0218 Predicted GTPase [General function prediction only]
Probab=25.94 E-value=56 Score=25.02 Aligned_cols=53 Identities=19% Similarity=0.005 Sum_probs=28.3
Q ss_pred ccEEEEEeecCCCCChHHH---HHHHhhC---CCcE--EEEecCCCcccccCHHHHHHHHHHHh
Q 038973 284 GSVHIWQGCEDRIIPSQIN---QFISEKL---PWIQ--YHEVPDAGHLFIFERKFCEAIIRALL 339 (341)
Q Consensus 284 ~Pvlii~g~~D~~~p~~~~---~~~~~~~---~~~~--~~~~~~~gH~~~~ep~~~~~~i~~fl 339 (341)
+|++++.-.-|.+-..+.. ..+++.+ +... +..++-..... -+++.+.|..++
T Consensus 136 i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~G---i~~l~~~i~~~~ 196 (200)
T COG0218 136 IPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKKG---IDELKAKILEWL 196 (200)
T ss_pred CCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccccC---HHHHHHHHHHHh
Confidence 3499999999998765543 3334333 2222 45555433333 244555555554
No 355
>PRK10437 carbonic anhydrase; Provisional
Probab=25.79 E-value=78 Score=24.80 Aligned_cols=32 Identities=13% Similarity=-0.011 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHhCCCCcEEEEEeccChHHHHHH
Q 038973 117 EACDVEQLADKLQIGSKFYVIGISMGAYPVYGC 149 (341)
Q Consensus 117 ~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~ 149 (341)
....++-.++.++. +.++|+||+-=|.+...+
T Consensus 77 ~~~~leyAV~~L~v-~~IvV~GHt~CG~V~Aal 108 (220)
T PRK10437 77 CLSVVQYAVDVLEV-EHIIICGHYGCGGVQAAV 108 (220)
T ss_pred hHHHHHHHHHHcCC-CEEEEeCCCCchHHHHHH
Confidence 45567777888999 899999999877776544
No 356
>COG5441 Uncharacterized conserved protein [Function unknown]
Probab=25.48 E-value=3.9e+02 Score=22.16 Aligned_cols=96 Identities=15% Similarity=0.115 Sum_probs=57.1
Q ss_pred eEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCC------------------------ccchHHHH
Q 038973 66 KIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRT------------------------VKTEACDV 121 (341)
Q Consensus 66 ~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~------------------------~~~~~~dl 121 (341)
..|++-|.+.++..-..+...+.+..|-.++.+|.--.+.-....+++ +..+++.+
T Consensus 3 krIyVvgT~DTKg~EL~ylad~I~~aG~~~v~vDvs~~~~~~~~~dis~~~VA~~hp~~~qAv~~~~Drg~AiaaMa~A~ 82 (401)
T COG5441 3 KRIYVVGTADTKGEELAYLADLIEAAGGSPVLVDVSTLRNPTSEVDISAEDVAGAHPGGRQAVLDGNDRGSAIAAMAEAF 82 (401)
T ss_pred ceEEEEecCCCcchhHHHHHHHHHHcCCCeEEEEeeccCCCCCCcccCHHHHhhhCCCcceeEeccCchhHHHHHHHHHH
Confidence 457777888877766666667777778889999975432222111111 12223333
Q ss_pred HHHHHHh-CCCCcEEEEEeccChHHHHHHHhhccccccceee
Q 038973 122 EQLADKL-QIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASL 162 (341)
Q Consensus 122 ~~~l~~l-~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il 162 (341)
..++.+- ++ .-++-+|-|.|..+++-.+..-|--+-+++.
T Consensus 83 ~r~l~sR~dV-~gmig~GGsgGT~lit~~m~~LPlgvPK~mV 123 (401)
T COG5441 83 VRFLSSRGDV-AGMIGMGGSGGTALITPAMRRLPLGVPKVMV 123 (401)
T ss_pred HHHhhcccch-hheeecCCCcchHhhhhHHHhcCcCCcceee
Confidence 3333322 23 4577788888888888877777765555543
No 357
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=25.31 E-value=1.6e+02 Score=24.13 Aligned_cols=78 Identities=17% Similarity=0.128 Sum_probs=41.3
Q ss_pred EEEcCCCCCCCcch-hhHHHHHHhcCc-------eEEEEcCCCCCCCCCCC-CCCccch--------HHHHHHHHHHhCC
Q 038973 68 IIIHGFGSSKDLNL-PVSQELIEELKI-------YFLSFDRPGYGESDPHP-LRTVKTE--------ACDVEQLADKLQI 130 (341)
Q Consensus 68 l~~hG~~~~~~~~~-~~~~~l~~~~~~-------~vi~~D~~G~G~S~~~~-~~~~~~~--------~~dl~~~l~~l~~ 130 (341)
+++.|.|...-.-. .+...+.++ |. +++.+|..|-=..+... ......+ ..+|.++++.++
T Consensus 28 iv~~GAGsAg~gia~ll~~~~~~~-G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~i~~v~- 105 (279)
T cd05312 28 ILFLGAGSAGIGIADLIVSAMVRE-GLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLEVVKAVK- 105 (279)
T ss_pred EEEECcCHHHHHHHHHHHHHHHHc-CCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHHHHHhcC-
Confidence 44556555433333 333333332 54 69999999854333221 0011111 235777777665
Q ss_pred CCcEEEEEecc-ChHHHHHH
Q 038973 131 GSKFYVIGISM-GAYPVYGC 149 (341)
Q Consensus 131 ~~~~~lvGhS~-Gg~~a~~~ 149 (341)
+-+++|-|- ||.+.-.+
T Consensus 106 --ptvlIG~S~~~g~ft~ev 123 (279)
T cd05312 106 --PTVLIGLSGVGGAFTEEV 123 (279)
T ss_pred --CCEEEEeCCCCCCCCHHH
Confidence 459999995 67554443
No 358
>PRK04148 hypothetical protein; Provisional
Probab=25.26 E-value=1.5e+02 Score=21.15 Aligned_cols=30 Identities=10% Similarity=-0.107 Sum_probs=21.0
Q ss_pred CcEEEEEeccChHHHHHHHhhccccccceeeecc
Q 038973 132 SKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVP 165 (341)
Q Consensus 132 ~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~ 165 (341)
.++..+|-..|..+|..++... .-++.++-
T Consensus 18 ~kileIG~GfG~~vA~~L~~~G----~~ViaIDi 47 (134)
T PRK04148 18 KKIVELGIGFYFKVAKKLKESG----FDVIVIDI 47 (134)
T ss_pred CEEEEEEecCCHHHHHHHHHCC----CEEEEEEC
Confidence 5799999998888888777542 24555553
No 359
>cd01967 Nitrogenase_MoFe_alpha_like Nitrogenase_MoFe_alpha_like: Nitrogenase MoFe protein, alpha subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. Three genetically distinct types of nitrogenase systems are known to exist: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). This group contains the alpha subunit of component 1 of all three different forms. The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. The role of the delta subunit is unknown. For MoFe, each alphabeta pair of subunits contains one
Probab=25.05 E-value=4.3e+02 Score=23.01 Aligned_cols=42 Identities=21% Similarity=0.214 Sum_probs=32.7
Q ss_pred CceEEEEcCCCCC---CCcchhhHHHHHHhcCceEEEEcCCCCCC
Q 038973 64 NHKIIIIHGFGSS---KDLNLPVSQELIEELKIYFLSFDRPGYGE 105 (341)
Q Consensus 64 ~~~vl~~hG~~~~---~~~~~~~~~~l~~~~~~~vi~~D~~G~G~ 105 (341)
+|-+|++-+.+.+ .+....++..+.++.+..|+.++.+|+..
T Consensus 87 ~P~~i~v~~tC~~~~iGdDi~~v~~~~~~~~~~~vi~v~t~gf~g 131 (406)
T cd01967 87 PPKAIFVYSTCPTGLIGDDIEAVAKEASKELGIPVIPVNCEGFRG 131 (406)
T ss_pred CCCEEEEECCCchhhhccCHHHHHHHHHHhhCCCEEEEeCCCeeC
Confidence 4667777666654 67788888888877788899999999865
No 360
>PRK00131 aroK shikimate kinase; Reviewed
Probab=25.04 E-value=93 Score=22.78 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=24.0
Q ss_pred ceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcC
Q 038973 65 HKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDR 100 (341)
Q Consensus 65 ~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~ 100 (341)
+.+|++.|.++++.+ .++..|++..|+.++-.|.
T Consensus 4 ~~~i~l~G~~GsGKs--tla~~La~~l~~~~~d~d~ 37 (175)
T PRK00131 4 GPNIVLIGFMGAGKS--TIGRLLAKRLGYDFIDTDH 37 (175)
T ss_pred CCeEEEEcCCCCCHH--HHHHHHHHHhCCCEEEChH
Confidence 568889998888765 3456677777776666553
No 361
>TIGR02739 TraF type-F conjugative transfer system pilin assembly protein TraF. This protein is part of a large group of proteins involved in conjugative transfer of plasmid DNA, specifically the F-type system. This protein has been predicted to contain a thioredoxin fold and has been shown to be localized to the periplasm. Unlike the related protein TrbB (TIGR02738), TraF does not contain a conserved pair of cysteines and has been shown not to function as a thiol disulfide isomerase by complementation of an Ecoli DsbA defect. The protein is believed to be involved in pilin assembly. Even more closely related than TrbB is a clade of genes (TIGR02740) which do contain the CXXC motif, but it is unclear whether these genes are involved in type-F conjugation systems per se.
Probab=24.93 E-value=2.3e+02 Score=22.95 Aligned_cols=42 Identities=17% Similarity=0.143 Sum_probs=31.9
Q ss_pred eEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCC
Q 038973 66 KIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESD 107 (341)
Q Consensus 66 ~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~ 107 (341)
.++|.-|-+.-...+.+++..+++++|+.|+.++.=|.|...
T Consensus 154 L~fFy~~~C~~C~~~apil~~fa~~ygi~v~~VS~DG~~~p~ 195 (256)
T TIGR02739 154 LFFFYRGKSPISQKMAPVIQAFAKEYGISVIPISVDGTLIPG 195 (256)
T ss_pred EEEEECCCCchhHHHHHHHHHHHHHhCCeEEEEecCCCCCCC
Confidence 455555555556677788899999999999999988877654
No 362
>PF12692 Methyltransf_17: S-adenosyl-L-methionine methyltransferase; PDB: 3IHT_B.
Probab=24.72 E-value=1.1e+02 Score=22.16 Aligned_cols=66 Identities=9% Similarity=0.031 Sum_probs=32.3
Q ss_pred CCCCcchhhHHHHHHhcCceEEEEcC--CCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChHH
Q 038973 75 SSKDLNLPVSQELIEELKIYFLSFDR--PGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYP 145 (341)
Q Consensus 75 ~~~~~~~~~~~~l~~~~~~~vi~~D~--~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~ 145 (341)
++...|+.+-+.+.. -+|+++|. ..|-.|.++.+.-+.--+++....+..++ .++.++=..+|+..
T Consensus 38 GNGRTydHLRe~~p~---R~I~vfDR~l~~hp~~~P~~~~~ilGdi~~tl~~~~~~g--~~a~laHaD~G~g~ 105 (160)
T PF12692_consen 38 GNGRTYDHLREIFPD---RRIYVFDRALACHPSSTPPEEDLILGDIRETLPALARFG--AGAALAHADIGTGD 105 (160)
T ss_dssp TTSHHHHHHHHH--S---S-EEEEESS--S-GGG---GGGEEES-HHHHHHHHHHH---S-EEEEEE----S-
T ss_pred CCCccHHHHHHhCCC---CeEEEEeeecccCCCCCCchHheeeccHHHHhHHHHhcC--CceEEEEeecCCCC
Confidence 556778877666654 44889985 45666655554444333444444477777 47888888999864
No 363
>COG2069 CdhD CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) [Energy production and conversion]
Probab=24.54 E-value=2.5e+02 Score=23.10 Aligned_cols=54 Identities=11% Similarity=0.087 Sum_probs=38.8
Q ss_pred hHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEecc
Q 038973 83 VSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISM 141 (341)
Q Consensus 83 ~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~ 141 (341)
+++...+++|...+++.+-+.+ ..-.+....+.++.++++++..+. .+++|-|-
T Consensus 155 WArk~Vk~fgadmvTiHlIsTd--Pki~D~p~~EAak~lEdvLqAVdv---PiiiGGSG 208 (403)
T COG2069 155 WARKCVKKFGADMVTIHLISTD--PKIKDTPAKEAAKTLEDVLQAVDV---PIIIGGSG 208 (403)
T ss_pred HHHHHHHHhCCceEEEEeecCC--ccccCCCHHHHHHHHHHHHHhcCc---CEEecCCC
Confidence 4456667788889999887553 223345788899999999999865 26666663
No 364
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=24.46 E-value=1.1e+02 Score=18.82 Aligned_cols=31 Identities=13% Similarity=0.295 Sum_probs=19.2
Q ss_pred ceEEEEcCCC-CCCCcchhhHHHHHHhcCceEEEE
Q 038973 65 HKIIIIHGFG-SSKDLNLPVSQELIEELKIYFLSF 98 (341)
Q Consensus 65 ~~vl~~hG~~-~~~~~~~~~~~~l~~~~~~~vi~~ 98 (341)
|.++++||.. ... +.++...+.+.|+.++.+
T Consensus 32 ~~~~lvhGga~~Ga---D~iA~~wA~~~gv~~~~~ 63 (71)
T PF10686_consen 32 PDMVLVHGGAPKGA---DRIAARWARERGVPVIRF 63 (71)
T ss_pred CCEEEEECCCCCCH---HHHHHHHHHHCCCeeEEe
Confidence 5678889876 333 345566666667655543
No 365
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=24.39 E-value=2.4e+02 Score=26.39 Aligned_cols=44 Identities=18% Similarity=0.153 Sum_probs=26.8
Q ss_pred CCceEEEEcCCCCCCC---cchhhHHHHHHhcCceEEEEcCC--CCCCCC
Q 038973 63 ANHKIIIIHGFGSSKD---LNLPVSQELIEELKIYFLSFDRP--GYGESD 107 (341)
Q Consensus 63 ~~~~vl~~hG~~~~~~---~~~~~~~~l~~~~~~~vi~~D~~--G~G~S~ 107 (341)
-+.|+|++||.....- .-..+...|... |..|-..-++ ||+.+.
T Consensus 550 i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~-g~~~~~~~~p~e~H~~~~ 598 (620)
T COG1506 550 IKTPLLLIHGEEDDRVPIEQAEQLVDALKRK-GKPVELVVFPDEGHGFSR 598 (620)
T ss_pred cCCCEEEEeecCCccCChHHHHHHHHHHHHc-CceEEEEEeCCCCcCCCC
Confidence 3578999999875432 233556666653 7666555555 455443
No 366
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=24.22 E-value=1.8e+02 Score=21.81 Aligned_cols=39 Identities=23% Similarity=0.304 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeecccc
Q 038973 118 ACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFV 167 (341)
Q Consensus 118 ~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~ 167 (341)
...+..+.+..+ -.+.+.||+= .. .-+++.+++++||..
T Consensus 98 ~~~l~~la~~~~--~Dvli~GHTH-------~p--~~~~~~~i~~vNPGS 136 (172)
T COG0622 98 LSLLEYLAKELG--ADVLIFGHTH-------KP--VAEKVGGILLVNPGS 136 (172)
T ss_pred HHHHHHHHHhcC--CCEEEECCCC-------cc--cEEEECCEEEEcCCC
Confidence 344555555555 4799999984 11 124678899999874
No 367
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=24.05 E-value=2.5e+02 Score=21.79 Aligned_cols=38 Identities=13% Similarity=0.031 Sum_probs=31.3
Q ss_pred CccEEEEEeecCCCCChHHHHHHHhhCCCcEEEEecCC
Q 038973 283 EGSVHIWQGCEDRIIPSQINQFISEKLPWIQYHEVPDA 320 (341)
Q Consensus 283 ~~Pvlii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~ 320 (341)
.-|++++.|..+...+.+....+.+.+.+-=+..++..
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~GGfl~~D~~ 90 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYLENGGFLLFDDR 90 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHHHcCCEEEEECC
Confidence 45699999999998888888999998877667777755
No 368
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=23.95 E-value=5.1e+02 Score=22.97 Aligned_cols=48 Identities=8% Similarity=0.101 Sum_probs=37.6
Q ss_pred cchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccc--cccceeee
Q 038973 115 KTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQ--RLAGASLV 163 (341)
Q Consensus 115 ~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~~il~ 163 (341)
+++.+.+.++-+.+.+ ..+.+|--+|=|.-|...|..+-+ .+.++|+.
T Consensus 198 e~Lm~El~~Ik~~~~P-~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 198 EELMDELKEIKEVINP-DETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHHHHHHHHhhcCC-CeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 4567777888888888 789999999999999888877655 36777775
No 369
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=23.78 E-value=1e+02 Score=24.62 Aligned_cols=20 Identities=30% Similarity=0.346 Sum_probs=17.2
Q ss_pred EEEEeccChHHHHHHHhhcc
Q 038973 135 YVIGISMGAYPVYGCLKYIP 154 (341)
Q Consensus 135 ~lvGhS~Gg~~a~~~a~~~p 154 (341)
.+.|-|.|+.++..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999987644
No 370
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=23.77 E-value=3.1e+02 Score=22.03 Aligned_cols=38 Identities=13% Similarity=0.043 Sum_probs=21.2
Q ss_pred CceEEEEcCCCCCCCcchhhHHHHHHhcCce-EEEEcCC
Q 038973 64 NHKIIIIHGFGSSKDLNLPVSQELIEELKIY-FLSFDRP 101 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~-vi~~D~~ 101 (341)
.+.|++++-.++....+........++.|+. |-.++.+
T Consensus 28 ~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~ 66 (250)
T TIGR02069 28 DAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVR 66 (250)
T ss_pred CceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecC
Confidence 4688899866554433333334444455763 5556654
No 371
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=23.77 E-value=1.1e+02 Score=24.59 Aligned_cols=22 Identities=27% Similarity=0.304 Sum_probs=18.4
Q ss_pred cEEEEEeccChHHHHHHHhhcc
Q 038973 133 KFYVIGISMGAYPVYGCLKYIP 154 (341)
Q Consensus 133 ~~~lvGhS~Gg~~a~~~a~~~p 154 (341)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3469999999999999987654
No 372
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=23.46 E-value=5.5e+02 Score=23.14 Aligned_cols=103 Identities=14% Similarity=0.079 Sum_probs=54.5
Q ss_pred CceEEEEcCCCCC---CCcchhhHHHHHHhcCceEEEEcCC---CCCCCCCCCCCCccchHHHHHHHHHH-----hC---
Q 038973 64 NHKIIIIHGFGSS---KDLNLPVSQELIEELKIYFLSFDRP---GYGESDPHPLRTVKTEACDVEQLADK-----LQ--- 129 (341)
Q Consensus 64 ~~~vl~~hG~~~~---~~~~~~~~~~l~~~~~~~vi~~D~~---G~G~S~~~~~~~~~~~~~dl~~~l~~-----l~--- 129 (341)
+.++|+++..... .......+..|.+. |+.|+-++.- .+|+.....-...++.++.+..++.. |.
T Consensus 180 ~~PvliaPaMN~~M~~npat~~Nl~~L~~~-G~~vi~P~~g~lA~~g~~G~Grm~e~~~I~~~v~~~~~~~~~~~l~gkk 258 (475)
T PRK13982 180 NRPILLAPAMNPLMWNNPATRRNVAQLKRD-GVHMIGPNAGEMAERGEAGVGRMAEPLEIAAAAEALLRPPQPKPLAGRR 258 (475)
T ss_pred CCCEEEEEcCCHHHhcCHHHHHHHHHHHHC-CCEEECCCCCccccCCCcCCCCCCCHHHHHHHHHHHHhhccccccCCCE
Confidence 4577888765443 22233556677664 9887766541 14555443334677777777777642 31
Q ss_pred -----------CCCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 130 -----------IGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 130 -----------~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
+ +++=.++.-.-|-.+..+|...-.+=..+++++++..
T Consensus 259 vLITaGpT~E~I-DpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~ 307 (475)
T PRK13982 259 VLITAGPTHEPI-DPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD 307 (475)
T ss_pred EEEecCCccccC-CcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC
Confidence 2 3444444333334444333322223456788876543
No 373
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=23.36 E-value=77 Score=17.78 Aligned_cols=27 Identities=11% Similarity=0.272 Sum_probs=21.5
Q ss_pred CCccchHHHHHHHHHHhCCCCcEEEEEe
Q 038973 112 RTVKTEACDVEQLADKLQIGSKFYVIGI 139 (341)
Q Consensus 112 ~~~~~~~~dl~~~l~~l~~~~~~~lvGh 139 (341)
.+.+.+..|+...|..+.+ ..+.++|-
T Consensus 6 w~PqSWM~DLrS~I~~~~I-~ql~ipGs 32 (51)
T PF03490_consen 6 WHPQSWMSDLRSSIGEMAI-TQLFIPGS 32 (51)
T ss_pred cCcHHHHHHHHHHHhccee-eeEEeccc
Confidence 3567889999999999888 67777763
No 374
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=23.23 E-value=1.1e+02 Score=24.54 Aligned_cols=22 Identities=18% Similarity=0.126 Sum_probs=18.2
Q ss_pred cEEEEEeccChHHHHHHHhhcc
Q 038973 133 KFYVIGISMGAYPVYGCLKYIP 154 (341)
Q Consensus 133 ~~~lvGhS~Gg~~a~~~a~~~p 154 (341)
.-.+.|-|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3568899999999999887654
No 375
>PRK14729 miaA tRNA delta(2)-isopentenylpyrophosphate transferase; Provisional
Probab=23.01 E-value=4.5e+02 Score=21.92 Aligned_cols=72 Identities=14% Similarity=0.062 Sum_probs=44.1
Q ss_pred eEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEc----CCCCCC-CCCC-------------------CCCCccchHHHH
Q 038973 66 KIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFD----RPGYGE-SDPH-------------------PLRTVKTEACDV 121 (341)
Q Consensus 66 ~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D----~~G~G~-S~~~-------------------~~~~~~~~~~dl 121 (341)
.||++-|-.+++.+ .++-.|+++ +-.||..| ++|.-- |.++ ..++..++.++.
T Consensus 5 ~ii~I~GpTasGKS--~LAl~LA~~-~~eIIsaDS~QvYr~ldIgTaKpt~eE~~~i~Hhlid~~~p~e~~sv~~f~~~a 81 (300)
T PRK14729 5 KIVFIFGPTAVGKS--NILFHFPKG-KAEIINVDSIQVYKEFDIASCKPSKELRKHIKHHLVDFLEPIKEYNLGIFYKEA 81 (300)
T ss_pred cEEEEECCCccCHH--HHHHHHHHh-CCcEEeccHHHHHCCCceecCCCCHHHHcCCCeeeeeccCCCCceeHHHHHHHH
Confidence 47788887777654 344567766 34789888 344321 1111 135777888888
Q ss_pred HHHHHHhCC-CCcEEEEEec
Q 038973 122 EQLADKLQI-GSKFYVIGIS 140 (341)
Q Consensus 122 ~~~l~~l~~-~~~~~lvGhS 140 (341)
...++.+.. ++..+|+|-|
T Consensus 82 ~~~i~~i~~~gk~PilvGGT 101 (300)
T PRK14729 82 LKIIKELRQQKKIPIFVGGS 101 (300)
T ss_pred HHHHHHHHHCCCCEEEEeCc
Confidence 888887622 2455777654
No 376
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=22.73 E-value=3e+02 Score=24.28 Aligned_cols=73 Identities=16% Similarity=0.066 Sum_probs=46.8
Q ss_pred CceEEEEcCCCCC---CCcchhhHHHHHHhcCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhC-----------
Q 038973 64 NHKIIIIHGFGSS---KDLNLPVSQELIEELKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQ----------- 129 (341)
Q Consensus 64 ~~~vl~~hG~~~~---~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~----------- 129 (341)
+|-+|++...+.+ .+....++..+.++.+..|+.++.+|+..+.. .-+...+..+++++-
T Consensus 85 ~p~~I~v~~tC~~~iIGdDi~~v~~~~~~~~~~~vi~v~t~gf~g~~~------~g~~~al~~l~~~~~~~~~~~~~~~~ 158 (430)
T cd01981 85 KPDLIVLTPTCTSSILQEDLQNFVRAAGLSSKSPVLPLDVNHYRVNEL------QAADETFEQLVRFYAEKARPQGTPRE 158 (430)
T ss_pred CCCEEEEeCCccHHHHhhCHHHHHHHhhhccCCCeEEecCCCccchHH------HHHHHHHHHHHHHHhccccccccccc
Confidence 4557777777654 56677787877766688899999999976531 222333444444320
Q ss_pred --CCCcEEEEEeccC
Q 038973 130 --IGSKFYVIGISMG 142 (341)
Q Consensus 130 --~~~~~~lvGhS~G 142 (341)
....+.++|.+..
T Consensus 159 ~~~~~~VNiiG~~~~ 173 (430)
T cd01981 159 KTEKPSVNLIGPSSL 173 (430)
T ss_pred cCCCCcEEEEcCCCC
Confidence 1146999998743
No 377
>PRK10626 hypothetical protein; Provisional
Probab=22.62 E-value=3.3e+02 Score=21.69 Aligned_cols=12 Identities=17% Similarity=0.279 Sum_probs=8.7
Q ss_pred ChHHHHHHHHHH
Q 038973 1 MFAPIAVALAVG 12 (341)
Q Consensus 1 m~~~~~~~~~~~ 12 (341)
|||+++++++++
T Consensus 1 ~mrk~~l~~~L~ 12 (239)
T PRK10626 1 MMRKMLLAALLS 12 (239)
T ss_pred ChHHHHHHHHHH
Confidence 788887776663
No 378
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.48 E-value=1.8e+02 Score=23.98 Aligned_cols=36 Identities=19% Similarity=0.221 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHhCC---CCcEEEEEec--cChHHHHHHHhh
Q 038973 117 EACDVEQLADKLQI---GSKFYVIGIS--MGAYPVYGCLKY 152 (341)
Q Consensus 117 ~~~dl~~~l~~l~~---~~~~~lvGhS--~Gg~~a~~~a~~ 152 (341)
-+..+.+++++.++ ++++.++|.| +|..++..+...
T Consensus 141 Tp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~ 181 (284)
T PRK14179 141 TPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDK 181 (284)
T ss_pred CHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHC
Confidence 35567788887764 4789999997 899999888764
No 379
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=22.37 E-value=5e+02 Score=22.24 Aligned_cols=112 Identities=18% Similarity=0.148 Sum_probs=66.0
Q ss_pred CCceEccCCcEEEEEEccCCC--------------CCCCceEEEEcCCCCCC-------CcchhhHHHHHHhcCceEEEE
Q 038973 40 SPRIKLSDGRHVAYREAGVPK--------------EEANHKIIIIHGFGSSK-------DLNLPVSQELIEELKIYFLSF 98 (341)
Q Consensus 40 ~~~~~~~~g~~l~~~~~g~~~--------------~~~~~~vl~~hG~~~~~-------~~~~~~~~~l~~~~~~~vi~~ 98 (341)
...+....|....++.+..+. ..+...+|++|+-..+. +.|+.+..-+.++.. +-.+
T Consensus 159 h~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~--~pff 236 (427)
T KOG1411|consen 159 HKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNL--LPFF 236 (427)
T ss_pred cCccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccc--cchh
Confidence 444555567766554443321 01234689999876655 477777666655533 5667
Q ss_pred cCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeeccc
Q 038973 99 DRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPF 166 (341)
Q Consensus 99 D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~ 166 (341)
|....|..+. +++.-+..+.-+++. | .-+++..|+.-.+. .|.+||.++-+++..
T Consensus 237 DmAYQGfaSG----~~d~DA~avR~F~~~-g---~~~~laQSyAKNMG-----LYgERvGa~svvc~~ 291 (427)
T KOG1411|consen 237 DMAYQGFASG----DLDKDAQAVRLFVED-G---HEILLAQSYAKNMG-----LYGERVGALSVVCKD 291 (427)
T ss_pred hhhhcccccC----CchhhHHHHHHHHHc-C---CceEeehhhhhhcc-----hhhhccceeEEEecC
Confidence 7777665432 455556666666654 2 23666677643333 367888888777753
No 380
>PRK13703 conjugal pilus assembly protein TraF; Provisional
Probab=22.17 E-value=2.3e+02 Score=22.79 Aligned_cols=41 Identities=7% Similarity=0.069 Sum_probs=29.5
Q ss_pred EEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCCCCCCCC
Q 038973 67 IIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRPGYGESD 107 (341)
Q Consensus 67 vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~G~G~S~ 107 (341)
+.|.-|-+.-...+.+++..+++++|+.|+.++.=|.|...
T Consensus 148 ~fFy~s~Cp~C~~~aPil~~fa~~yg~~v~~VS~DG~~~p~ 188 (248)
T PRK13703 148 MFFYRGQDPIDGQLAQVINDFRDTYGLSVIPVSVDGVINPL 188 (248)
T ss_pred EEEECCCCchhHHHHHHHHHHHHHhCCeEEEEecCCCCCCC
Confidence 34444445556677788888888889889888887776543
No 381
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=21.15 E-value=2.2e+02 Score=24.81 Aligned_cols=48 Identities=13% Similarity=0.101 Sum_probs=28.4
Q ss_pred CceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEec
Q 038973 92 KIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGIS 140 (341)
Q Consensus 92 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS 140 (341)
.|.||.+|.|.+++|......-..++.+-+...++-+.. .-+.++--+
T Consensus 290 ~fDlIilDPPsF~r~k~~~~~~~rdy~~l~~~~~~iL~p-gG~l~~~s~ 337 (393)
T COG1092 290 KFDLIILDPPSFARSKKQEFSAQRDYKDLNDLALRLLAP-GGTLVTSSC 337 (393)
T ss_pred cccEEEECCcccccCcccchhHHHHHHHHHHHHHHHcCC-CCEEEEEec
Confidence 488999999999999754422334444444455555554 234444333
No 382
>PLN02840 tRNA dimethylallyltransferase
Probab=21.00 E-value=4.6e+02 Score=23.13 Aligned_cols=75 Identities=21% Similarity=0.170 Sum_probs=44.6
Q ss_pred CceEEEEcCCCCCCCcchhhHHHHHHhcCceEEEEcCC----CCCC-CCCC-------------------CCCCccchHH
Q 038973 64 NHKIIIIHGFGSSKDLNLPVSQELIEELKIYFLSFDRP----GYGE-SDPH-------------------PLRTVKTEAC 119 (341)
Q Consensus 64 ~~~vl~~hG~~~~~~~~~~~~~~l~~~~~~~vi~~D~~----G~G~-S~~~-------------------~~~~~~~~~~ 119 (341)
+..+|++-|-.+++.. .++..|+++++..++..|-. |.-- |.++ ..|+..++.+
T Consensus 20 ~~~vi~I~GptgsGKT--tla~~La~~~~~~iis~Ds~qvYr~~~IgTaKpt~eE~~~V~Hhlidil~p~e~ySv~~F~~ 97 (421)
T PLN02840 20 KEKVIVISGPTGAGKS--RLALELAKRLNGEIISADSVQVYRGLDVGSAKPSLSERKEVPHHLIDILHPSDDYSVGAFFD 97 (421)
T ss_pred CCeEEEEECCCCCCHH--HHHHHHHHHCCCCeEeccccceecceeEEcCCCCHHHHcCCCeEeEeecCCCCceeHHHHHH
Confidence 3457777777666543 34557777766668887752 2211 1111 1357778888
Q ss_pred HHHHHHHHhC-CCCcEEEEEec
Q 038973 120 DVEQLADKLQ-IGSKFYVIGIS 140 (341)
Q Consensus 120 dl~~~l~~l~-~~~~~~lvGhS 140 (341)
+....++.+. -++..+|+|-+
T Consensus 98 ~A~~~I~~i~~rgkiPIvVGGT 119 (421)
T PLN02840 98 DARRATQDILNRGRVPIVAGGT 119 (421)
T ss_pred HHHHHHHHHHhcCCCEEEEcCc
Confidence 8888887762 22445666644
No 383
>PF06107 DUF951: Bacterial protein of unknown function (DUF951); InterPro: IPR009296 This family consists of several short hypothetical bacterial proteins of unknown function.
Probab=20.73 E-value=96 Score=18.14 Aligned_cols=23 Identities=13% Similarity=0.293 Sum_probs=17.5
Q ss_pred ecCCCcccccCHHHHHHHHHHHh
Q 038973 317 VPDAGHLFIFERKFCEAIIRALL 339 (341)
Q Consensus 317 ~~~~gH~~~~ep~~~~~~i~~fl 339 (341)
-.|+||.+++....|...+...+
T Consensus 34 C~gCg~~imlpR~~feK~~Kkvi 56 (57)
T PF06107_consen 34 CLGCGRQIMLPRSKFEKRLKKVI 56 (57)
T ss_pred ECCCCCEEEEeHHHHHHHHHHhc
Confidence 56899999988677777776655
No 384
>TIGR02683 upstrm_HI1419 probable addiction module killer protein. Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the upstream member of a gene pair, where the downstream member is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, often are located with prophage regions, but also in both integrated plasmid regions and near housekeeping genes. Analysis suggests that the gene pair may serve as an addiction module.
Probab=20.70 E-value=1.4e+02 Score=19.54 Aligned_cols=30 Identities=27% Similarity=0.411 Sum_probs=18.0
Q ss_pred CceEccCCcEEEEEEccCCCCCCCceEEEEcCCCCC
Q 038973 41 PRIKLSDGRHVAYREAGVPKEEANHKIIIIHGFGSS 76 (341)
Q Consensus 41 ~~~~~~~g~~l~~~~~g~~~~~~~~~vl~~hG~~~~ 76 (341)
-++...++.++.|...+. ..+|++||+-=.
T Consensus 50 lR~r~g~~yRiif~~~~~------~~vvll~gf~Kk 79 (95)
T TIGR02683 50 LRIDFGPGYRVYFTQRGK------VIILLLCGGDKS 79 (95)
T ss_pred EEecCCCCEEEEEEEECC------EEEEEEeCEecc
Confidence 344443366676666533 378899987543
No 385
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.61 E-value=1.8e+02 Score=21.24 Aligned_cols=31 Identities=13% Similarity=0.053 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHhCCCCcEEEEEeccChHHHHH
Q 038973 117 EACDVEQLADKLQIGSKFYVIGISMGAYPVYG 148 (341)
Q Consensus 117 ~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~ 148 (341)
....++-.+..++. +.++++|||-=|.+...
T Consensus 78 ~~~sl~yav~~l~v-~~IvV~GHt~CG~~~a~ 108 (154)
T cd03378 78 VLGSLEYAVEVLGV-PLVVVLGHESCGAVAAA 108 (154)
T ss_pred HHHHHHHHHHHhCC-CEEEEEcCCCccHHHHH
Confidence 45667777888999 89999999986665543
No 386
>COG3621 Patatin [General function prediction only]
Probab=20.59 E-value=2.4e+02 Score=23.73 Aligned_cols=53 Identities=21% Similarity=0.213 Sum_probs=34.0
Q ss_pred CceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHh-CC--CCcEEEE-EeccChHHHHHHHhhcc
Q 038973 92 KIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKL-QI--GSKFYVI-GISMGAYPVYGCLKYIP 154 (341)
Q Consensus 92 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l-~~--~~~~~lv-GhS~Gg~~a~~~a~~~p 154 (341)
.|++..+|=-|.-. .+...+...+++. |. .+.+.++ |.|.||.+++.+|...+
T Consensus 8 k~rIlsldGGGvrG----------~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 8 KYRILSLDGGGVRG----------AILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred ceeEEEecCCcccc----------HHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 36688887654322 3555666666664 22 2345554 89999999999887543
No 387
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=20.35 E-value=1.8e+02 Score=17.97 Aligned_cols=32 Identities=13% Similarity=0.023 Sum_probs=21.4
Q ss_pred cCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHH
Q 038973 91 LKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLAD 126 (341)
Q Consensus 91 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~ 126 (341)
.+|.+..+|++|+-. .+.|.++..+.+..+++
T Consensus 14 g~y~~~~Pdlpgc~s----~G~T~eea~~n~~eai~ 45 (73)
T COG1598 14 GGYVASVPDLPGCHS----QGETLEEALQNAKEAIE 45 (73)
T ss_pred CCEEEEeCCCCCccc----cCCCHHHHHHHHHHHHH
Confidence 378899999998743 23466666666655554
No 388
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=20.30 E-value=3.4e+02 Score=19.58 Aligned_cols=48 Identities=8% Similarity=-0.008 Sum_probs=31.6
Q ss_pred HHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccccccceeeeccccc
Q 038973 120 DVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQRLAGASLVVPFVH 168 (341)
Q Consensus 120 dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~~il~~~~~~ 168 (341)
++.++++..+. +.++++|-+....+..-.......-++-.|+.++...
T Consensus 89 ~l~~~L~~~gi-~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da~~s 136 (155)
T cd01014 89 DLEEWLREAGI-DHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADACAT 136 (155)
T ss_pred CHHHHHHHCCC-CEEEEEeeccchhHHHHHHHHHHCCCcEEEecccccC
Confidence 67888888999 8999999998766544333222233555566555543
No 389
>cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics. Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism.
Probab=20.23 E-value=3.5e+02 Score=22.60 Aligned_cols=75 Identities=12% Similarity=0.148 Sum_probs=49.7
Q ss_pred CceEEEEcCCCCC-----CCcchhhHHHHHHhcCceEEEEcCC-CCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEE
Q 038973 64 NHKIIIIHGFGSS-----KDLNLPVSQELIEELKIYFLSFDRP-GYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVI 137 (341)
Q Consensus 64 ~~~vl~~hG~~~~-----~~~~~~~~~~l~~~~~~~vi~~D~~-G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lv 137 (341)
+.|||.-|...-. ...-+..+..++++-| ||.+.+- .+-.. ....+++++++.+..+++-.|. ..+.+
T Consensus 188 ~~PviaSHsn~ral~~h~RNltD~~i~~ia~~GG--vigi~~~~~fl~~--~~~~~~~~~~~hi~~i~~l~G~--dhVgi 261 (309)
T cd01301 188 NAPVIASHSNARALCDHPRNLTDAQLKAIAETGG--VIGVNFYPAFLSP--GADATLDDVVRHIDYIVDLIGI--DHVGL 261 (309)
T ss_pred CCCEEEeccChHHhcCCCCCCCHHHHHHHHHcCC--EEEEeeeHHHhCC--CCCCCHHHHHHHHHHHHHhcCC--CeEEE
Confidence 4578999976432 2233467788888777 7666542 22211 1235788999999999988886 56777
Q ss_pred EeccChH
Q 038973 138 GISMGAY 144 (341)
Q Consensus 138 GhS~Gg~ 144 (341)
|-.+.|.
T Consensus 262 GsDfdg~ 268 (309)
T cd01301 262 GSDFDGI 268 (309)
T ss_pred CcccCCC
Confidence 8888773
No 390
>PRK10867 signal recognition particle protein; Provisional
Probab=20.21 E-value=6.2e+02 Score=22.50 Aligned_cols=64 Identities=11% Similarity=0.059 Sum_probs=37.0
Q ss_pred cCceEEEEcCCCCCCCCCCCCCCccchHHHHHHHHHHhCCCCcEEEEEeccChHHHHHHHhhccc--cccceee
Q 038973 91 LKIYFLSFDRPGYGESDPHPLRTVKTEACDVEQLADKLQIGSKFYVIGISMGAYPVYGCLKYIPQ--RLAGASL 162 (341)
Q Consensus 91 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~dl~~~l~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~--~v~~~il 162 (341)
.+|.++.+|-+|.... -+...+.+..+.+.... ..+++|--++-|.-+...+..+-+ .+.++|+
T Consensus 182 ~~~DvVIIDTaGrl~~-------d~~lm~eL~~i~~~v~p-~evllVlda~~gq~av~~a~~F~~~~~i~giIl 247 (433)
T PRK10867 182 NGYDVVIVDTAGRLHI-------DEELMDELKAIKAAVNP-DEILLVVDAMTGQDAVNTAKAFNEALGLTGVIL 247 (433)
T ss_pred cCCCEEEEeCCCCccc-------CHHHHHHHHHHHHhhCC-CeEEEEEecccHHHHHHHHHHHHhhCCCCEEEE
Confidence 3688999999986532 22344555555555555 455666555555555555544322 3556655
No 391
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=20.20 E-value=1.1e+02 Score=24.73 Aligned_cols=41 Identities=20% Similarity=0.260 Sum_probs=28.0
Q ss_pred HHHHHHHHhCCCCcE-EEEEeccChHHHHHHHhhccccccceee
Q 038973 120 DVEQLADKLQIGSKF-YVIGISMGAYPVYGCLKYIPQRLAGASL 162 (341)
Q Consensus 120 dl~~~l~~l~~~~~~-~lvGhS~Gg~~a~~~a~~~p~~v~~~il 162 (341)
-|.++++.-. .++ .++|.|+|+.-+..+.+..+.+-+++++
T Consensus 29 VLD~fl~a~~--~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 29 VLDEFLRANF--NPFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred HHHHHHHhcc--CCcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 3445553322 233 4789999999999998888877666554
No 392
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=20.03 E-value=1.8e+02 Score=21.40 Aligned_cols=37 Identities=24% Similarity=0.248 Sum_probs=24.1
Q ss_pred chHHHHHHHHHHhCC---CCcEEEEEec--cChHHHHHHHhh
Q 038973 116 TEACDVEQLADKLQI---GSKFYVIGIS--MGAYPVYGCLKY 152 (341)
Q Consensus 116 ~~~~dl~~~l~~l~~---~~~~~lvGhS--~Gg~~a~~~a~~ 152 (341)
--+..+.+++++.+. ++++.++|.| .|-.++..+..+
T Consensus 18 cTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 18 CTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 346667788887653 4789999999 466666666554
No 393
>TIGR03632 bact_S11 30S ribosomal protein S11. This model describes the bacterial 30S ribosomal protein S11. Cutoffs are set such that the model excludes archaeal and eukaryotic ribosomal proteins, but many chloroplast and mitochondrial equivalents of S11 are detected.
Probab=20.00 E-value=2.4e+02 Score=19.11 Aligned_cols=51 Identities=14% Similarity=0.100 Sum_probs=33.5
Q ss_pred CCCCccchHHHHHHHHHHhCCCCcEEE--EEeccChHHHHHHHhhcccccccee
Q 038973 110 PLRTVKTEACDVEQLADKLQIGSKFYV--IGISMGAYPVYGCLKYIPQRLAGAS 161 (341)
Q Consensus 110 ~~~~~~~~~~dl~~~l~~l~~~~~~~l--vGhS~Gg~~a~~~a~~~p~~v~~~i 161 (341)
..+.....++++...+..+++ ..+.+ =|...|...++.......-+|..+-
T Consensus 41 t~~Aa~~~a~~~~~~~~~~gi-~~v~v~~kG~G~gr~~~ir~l~~~glkI~~I~ 93 (108)
T TIGR03632 41 TPYAAQLAAEDAAKKAKEFGM-KTVDVYVKGPGAGRESAIRALQAAGLEVTSIK 93 (108)
T ss_pred CHHHHHHHHHHHHHHHHHcCC-cEEEEEEECCCCcHHHHHHHHHHCCCEEEEEE
Confidence 345566677778888888887 55444 4777888888877766544444433
Done!