Query 038976
Match_columns 220
No_of_seqs 197 out of 1224
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 05:09:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038976.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038976hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 6E-72 1.3E-76 516.6 19.0 209 4-212 35-246 (454)
2 PF00450 Peptidase_S10: Serine 100.0 9.9E-69 2.2E-73 487.2 15.1 207 4-210 2-212 (415)
3 PLN02209 serine carboxypeptida 100.0 1.6E-64 3.5E-69 468.2 22.0 209 9-218 36-262 (437)
4 PTZ00472 serine carboxypeptida 100.0 2.4E-63 5.2E-68 463.6 24.3 215 5-220 40-264 (462)
5 PLN03016 sinapoylglucose-malat 100.0 2E-63 4.2E-68 460.6 22.3 201 9-210 34-241 (433)
6 COG2939 Carboxypeptidase C (ca 100.0 8E-50 1.7E-54 368.2 15.5 206 9-220 73-290 (498)
7 KOG1283 Serine carboxypeptidas 100.0 4.7E-43 1E-47 307.5 10.5 198 14-218 5-205 (414)
8 PLN02213 sinapoylglucose-malat 100.0 1.8E-38 4E-43 283.7 13.7 127 83-210 1-127 (319)
9 TIGR03611 RutD pyrimidine util 98.7 9.8E-08 2.1E-12 79.1 9.4 116 28-181 2-117 (257)
10 TIGR01250 pro_imino_pep_2 prol 98.7 1.5E-07 3.3E-12 78.9 10.4 129 13-180 3-132 (288)
11 PRK10673 acyl-CoA esterase; Pr 98.6 2.3E-07 5.1E-12 78.1 9.8 110 29-177 5-114 (255)
12 PHA02857 monoglyceride lipase; 98.5 9.8E-07 2.1E-11 75.8 10.9 124 24-181 10-134 (276)
13 PLN02824 hydrolase, alpha/beta 98.5 1E-06 2.2E-11 76.6 10.1 105 40-179 29-137 (294)
14 PRK00870 haloalkane dehalogena 98.5 3.7E-06 8E-11 73.5 13.3 132 8-178 15-149 (302)
15 TIGR03056 bchO_mg_che_rel puta 98.4 1.9E-06 4.1E-11 72.9 10.4 105 39-180 27-131 (278)
16 PLN02385 hydrolase; alpha/beta 98.4 2.5E-06 5.5E-11 76.5 11.7 125 24-179 71-197 (349)
17 PF12697 Abhydrolase_6: Alpha/ 98.4 1.1E-06 2.4E-11 70.5 8.2 104 43-182 1-104 (228)
18 PLN02298 hydrolase, alpha/beta 98.4 3.3E-06 7.1E-11 74.9 11.7 138 10-180 30-170 (330)
19 PLN02652 hydrolase; alpha/beta 98.3 1.7E-05 3.7E-10 73.2 13.2 126 24-180 120-246 (395)
20 TIGR01249 pro_imino_pep_1 prol 98.2 6E-06 1.3E-10 72.7 9.1 124 14-179 6-130 (306)
21 PRK03592 haloalkane dehalogena 98.2 1.1E-05 2.4E-10 70.0 10.0 104 39-180 26-129 (295)
22 PRK11126 2-succinyl-6-hydroxy- 98.2 1E-05 2.2E-10 67.7 9.1 100 40-178 2-101 (242)
23 TIGR02240 PHA_depoly_arom poly 98.2 1.7E-05 3.6E-10 68.4 10.6 115 25-179 12-126 (276)
24 TIGR02427 protocat_pcaD 3-oxoa 98.2 1.8E-05 4E-10 64.6 9.9 88 39-154 12-99 (251)
25 PLN02894 hydrolase, alpha/beta 98.2 1.4E-05 3E-10 73.8 10.1 108 39-179 104-211 (402)
26 TIGR03695 menH_SHCHC 2-succiny 98.1 1.6E-05 3.4E-10 64.7 8.9 105 40-179 1-105 (251)
27 PF10340 DUF2424: Protein of u 98.1 6.9E-06 1.5E-10 75.2 7.3 131 27-183 106-239 (374)
28 PRK03204 haloalkane dehalogena 98.1 2.4E-05 5.1E-10 68.4 10.4 125 10-179 12-136 (286)
29 PLN02679 hydrolase, alpha/beta 98.0 4.7E-05 1E-09 68.9 11.1 132 9-178 58-190 (360)
30 TIGR03101 hydr2_PEP hydrolase, 98.0 0.00011 2.4E-09 64.6 12.5 128 24-186 9-141 (266)
31 PRK10349 carboxylesterase BioH 98.0 2.4E-05 5.3E-10 66.3 7.7 94 41-177 14-107 (256)
32 TIGR03343 biphenyl_bphD 2-hydr 98.0 9.8E-05 2.1E-09 63.1 11.3 93 39-155 29-122 (282)
33 COG1506 DAP2 Dipeptidyl aminop 98.0 1.4E-05 3.1E-10 77.7 6.5 138 17-182 368-510 (620)
34 PLN03084 alpha/beta hydrolase 97.9 8.7E-05 1.9E-09 68.4 11.0 106 39-179 126-232 (383)
35 PRK10749 lysophospholipase L2; 97.9 0.00012 2.6E-09 65.3 11.4 124 24-180 40-167 (330)
36 PRK05077 frsA fermentation/res 97.9 0.00018 3.8E-09 66.9 12.3 128 17-180 171-301 (414)
37 TIGR01738 bioH putative pimelo 97.9 5.1E-05 1.1E-09 61.8 7.6 96 40-178 4-99 (245)
38 TIGR02821 fghA_ester_D S-formy 97.8 0.00098 2.1E-08 58.1 14.5 55 118-182 122-176 (275)
39 PLN02965 Probable pheophorbida 97.8 9.8E-05 2.1E-09 62.9 8.0 99 43-178 6-106 (255)
40 KOG4409 Predicted hydrolase/ac 97.8 0.00018 3.9E-09 65.3 9.5 132 12-181 65-197 (365)
41 PRK14875 acetoin dehydrogenase 97.8 0.00023 4.9E-09 63.5 10.2 103 38-178 129-231 (371)
42 PLN03087 BODYGUARD 1 domain co 97.7 0.0005 1.1E-08 65.2 12.9 129 14-177 178-307 (481)
43 PLN02211 methyl indole-3-aceta 97.7 0.00031 6.7E-09 61.2 10.2 105 38-178 16-121 (273)
44 PLN02578 hydrolase 97.7 0.00022 4.7E-09 64.3 8.9 101 40-178 86-186 (354)
45 PRK10566 esterase; Provisional 97.7 0.0003 6.4E-09 59.4 9.3 108 28-154 14-127 (249)
46 PLN02980 2-oxoglutarate decarb 97.7 0.00052 1.1E-08 73.7 13.0 105 38-177 1369-1478(1655)
47 PRK06489 hypothetical protein; 97.7 0.00039 8.4E-09 62.8 10.5 112 40-177 69-187 (360)
48 PRK05855 short chain dehydroge 97.6 0.00028 6E-09 66.5 9.6 101 24-152 12-112 (582)
49 TIGR01840 esterase_phb esteras 97.6 0.00074 1.6E-08 56.4 11.0 102 38-154 11-115 (212)
50 COG2267 PldB Lysophospholipase 97.6 0.001 2.2E-08 59.3 11.8 127 23-182 18-145 (298)
51 TIGR01607 PST-A Plasmodium sub 97.6 0.0011 2.5E-08 59.4 12.0 150 24-179 7-185 (332)
52 PLN02442 S-formylglutathione h 97.5 0.002 4.3E-08 56.6 12.1 56 114-182 126-181 (283)
53 COG0596 MhpC Predicted hydrola 97.5 0.001 2.2E-08 53.2 9.3 103 40-179 21-123 (282)
54 PRK07581 hypothetical protein; 97.4 0.0011 2.4E-08 59.0 10.1 114 25-156 26-146 (339)
55 PF00561 Abhydrolase_1: alpha/ 97.4 0.00046 1E-08 56.2 7.1 78 84-178 1-78 (230)
56 KOG1455 Lysophospholipase [Lip 97.4 0.0016 3.5E-08 58.1 10.7 108 23-154 36-149 (313)
57 PLN02511 hydrolase 97.4 0.0017 3.6E-08 59.7 11.0 116 14-154 73-193 (388)
58 TIGR03100 hydr1_PEP hydrolase, 97.4 0.0028 6.1E-08 55.2 11.7 122 25-180 12-135 (274)
59 PRK08775 homoserine O-acetyltr 97.4 0.0011 2.3E-08 59.5 9.1 75 82-179 98-173 (343)
60 TIGR00976 /NonD putative hydro 97.3 0.0028 6.1E-08 60.8 11.5 130 23-182 5-135 (550)
61 KOG1515 Arylacetamide deacetyl 97.3 0.0031 6.6E-08 57.4 10.8 140 19-182 66-210 (336)
62 PRK00175 metX homoserine O-ace 97.2 0.0043 9.4E-08 56.6 11.6 128 24-179 32-182 (379)
63 cd00707 Pancreat_lipase_like P 97.2 0.00069 1.5E-08 59.5 6.2 110 38-177 34-145 (275)
64 KOG2564 Predicted acetyltransf 97.1 0.0018 4E-08 57.4 7.8 106 38-176 72-179 (343)
65 PRK10985 putative hydrolase; P 97.1 0.01 2.3E-07 52.8 12.9 134 14-180 33-169 (324)
66 PF05577 Peptidase_S28: Serine 97.1 0.0039 8.4E-08 57.9 9.9 97 83-190 59-159 (434)
67 PRK10115 protease 2; Provision 97.1 0.011 2.3E-07 58.6 13.3 137 22-185 424-565 (686)
68 PF00326 Peptidase_S9: Prolyl 97.0 0.0014 3E-08 54.4 5.8 93 83-186 14-106 (213)
69 KOG4178 Soluble epoxide hydrol 96.9 0.009 1.9E-07 53.8 10.5 137 10-184 20-158 (322)
70 TIGR03230 lipo_lipase lipoprot 96.8 0.0066 1.4E-07 57.1 8.9 80 83-177 73-152 (442)
71 PLN00021 chlorophyllase 96.8 0.013 2.8E-07 52.6 10.4 94 38-156 50-148 (313)
72 PRK10162 acetyl esterase; Prov 96.8 0.014 3E-07 52.1 10.3 46 132-181 152-197 (318)
73 KOG2100 Dipeptidyl aminopeptid 96.6 0.0088 1.9E-07 59.8 8.6 135 25-182 508-647 (755)
74 PF00975 Thioesterase: Thioest 96.5 0.017 3.7E-07 47.9 8.8 102 42-179 2-104 (229)
75 TIGR01392 homoserO_Ac_trn homo 96.5 0.042 9E-07 49.3 11.5 131 24-179 15-162 (351)
76 COG3509 LpqC Poly(3-hydroxybut 96.4 0.047 1E-06 48.8 11.0 108 26-155 46-165 (312)
77 KOG4391 Predicted alpha/beta h 96.3 0.018 3.9E-07 49.7 7.3 123 24-181 64-186 (300)
78 PF10503 Esterase_phd: Esteras 96.2 0.032 6.8E-07 47.8 8.4 46 123-178 86-131 (220)
79 PF12695 Abhydrolase_5: Alpha/ 96.0 0.026 5.5E-07 43.0 6.5 94 42-179 1-95 (145)
80 cd00312 Esterase_lipase Estera 95.6 0.094 2E-06 49.2 9.7 34 118-152 161-194 (493)
81 KOG1454 Predicted hydrolase/ac 95.5 0.088 1.9E-06 47.5 9.0 65 84-157 87-151 (326)
82 PRK11460 putative hydrolase; P 95.5 0.12 2.6E-06 44.0 9.4 37 117-154 87-123 (232)
83 PF07859 Abhydrolase_3: alpha/ 95.5 0.028 6.1E-07 46.1 5.3 91 111-208 46-142 (211)
84 PF10230 DUF2305: Uncharacteri 95.5 0.13 2.8E-06 45.0 9.7 116 40-179 2-122 (266)
85 PF06500 DUF1100: Alpha/beta h 95.4 0.013 2.9E-07 54.5 3.4 79 84-180 219-297 (411)
86 PLN02872 triacylglycerol lipas 95.4 0.066 1.4E-06 49.6 8.0 95 39-149 73-175 (395)
87 PRK11071 esterase YqiA; Provis 95.0 0.081 1.7E-06 43.7 6.5 88 41-181 2-95 (190)
88 PF02129 Peptidase_S15: X-Pro 94.8 0.049 1.1E-06 47.2 4.9 83 84-183 58-140 (272)
89 COG0657 Aes Esterase/lipase [L 94.7 0.69 1.5E-05 40.7 12.2 73 113-191 129-203 (312)
90 TIGR03502 lipase_Pla1_cef extr 94.7 0.21 4.5E-06 50.3 9.7 98 39-154 448-575 (792)
91 PLN02454 triacylglycerol lipas 94.6 0.092 2E-06 49.0 6.4 65 112-179 207-271 (414)
92 KOG1838 Alpha/beta hydrolase [ 94.4 0.59 1.3E-05 43.6 11.2 107 39-179 124-236 (409)
93 PF01764 Lipase_3: Lipase (cla 94.1 0.11 2.5E-06 39.8 5.2 62 112-179 45-106 (140)
94 COG0400 Predicted esterase [Ge 93.9 0.28 6.1E-06 41.6 7.5 41 113-154 79-119 (207)
95 PF06057 VirJ: Bacterial virul 93.8 0.12 2.5E-06 43.5 5.0 67 107-182 44-110 (192)
96 cd00519 Lipase_3 Lipase (class 93.5 0.17 3.7E-06 42.6 5.5 59 113-179 110-168 (229)
97 PF05728 UPF0227: Uncharacteri 93.5 0.13 2.8E-06 42.9 4.7 54 118-187 46-99 (187)
98 PRK13604 luxD acyl transferase 93.0 1.5 3.3E-05 39.5 11.1 121 23-180 18-142 (307)
99 PRK05371 x-prolyl-dipeptidyl a 92.8 0.42 9.1E-06 48.1 8.0 83 83-181 279-375 (767)
100 PF02230 Abhydrolase_2: Phosph 92.7 0.42 9.1E-06 39.8 6.8 56 115-182 88-143 (216)
101 cd00741 Lipase Lipase. Lipase 92.7 0.21 4.5E-06 39.4 4.6 43 113-158 10-52 (153)
102 KOG1552 Predicted alpha/beta h 92.6 2.3 5E-05 37.4 11.2 106 39-182 59-166 (258)
103 KOG3975 Uncharacterized conser 92.2 0.92 2E-05 40.0 8.3 113 25-153 13-129 (301)
104 PLN02571 triacylglycerol lipas 92.0 0.47 1E-05 44.4 6.7 67 112-179 205-275 (413)
105 KOG4627 Kynurenine formamidase 92.0 0.42 9.1E-06 41.1 5.9 57 94-156 102-158 (270)
106 PRK10252 entF enterobactin syn 91.6 1.6 3.5E-05 45.6 10.9 91 39-158 1067-1157(1296)
107 PRK06765 homoserine O-acetyltr 91.5 2.1 4.5E-05 39.6 10.5 41 113-156 142-183 (389)
108 KOG2281 Dipeptidyl aminopeptid 91.2 0.59 1.3E-05 46.0 6.6 113 39-182 641-765 (867)
109 PF07819 PGAP1: PGAP1-like pro 91.2 2.9 6.4E-05 35.6 10.3 64 113-183 62-128 (225)
110 KOG2183 Prolylcarboxypeptidase 90.9 0.64 1.4E-05 43.6 6.3 65 83-149 111-182 (492)
111 PF05990 DUF900: Alpha/beta hy 90.8 0.42 9E-06 41.0 4.8 67 113-183 75-141 (233)
112 PF00151 Lipase: Lipase; Inte 90.7 0.087 1.9E-06 47.8 0.5 70 83-157 104-173 (331)
113 PRK04940 hypothetical protein; 90.6 0.42 9.2E-06 39.8 4.4 40 134-186 60-99 (180)
114 PLN02733 phosphatidylcholine-s 90.4 0.68 1.5E-05 43.7 6.2 40 112-154 143-182 (440)
115 COG0429 Predicted hydrolase of 90.3 3.3 7.1E-05 37.8 10.2 117 27-178 63-185 (345)
116 PF11144 DUF2920: Protein of u 90.3 0.67 1.4E-05 43.2 5.9 60 113-182 162-222 (403)
117 PRK10439 enterobactin/ferric e 89.9 2.4 5.2E-05 39.5 9.4 36 134-179 288-323 (411)
118 COG4099 Predicted peptidase [G 89.9 6.9 0.00015 35.6 11.7 39 118-156 253-291 (387)
119 PLN02719 triacylglycerol lipas 89.5 0.98 2.1E-05 43.3 6.5 69 111-179 273-345 (518)
120 PLN02753 triacylglycerol lipas 89.1 1.1 2.3E-05 43.2 6.4 69 111-179 287-359 (531)
121 COG2272 PnbA Carboxylesterase 88.3 3.9 8.5E-05 39.1 9.5 18 134-151 180-197 (491)
122 PLN02324 triacylglycerol lipas 88.0 1.4 3.1E-05 41.2 6.4 68 111-179 193-265 (415)
123 PF05448 AXE1: Acetyl xylan es 87.7 2.3 4.9E-05 38.4 7.3 126 22-180 64-210 (320)
124 PF05677 DUF818: Chlamydia CHL 87.6 1.3 2.9E-05 40.5 5.8 60 83-150 171-231 (365)
125 PF08538 DUF1749: Protein of u 86.6 4 8.7E-05 36.7 8.2 73 109-187 82-156 (303)
126 TIGR01836 PHA_synth_III_C poly 86.0 1.9 4.2E-05 38.5 6.0 78 84-181 95-173 (350)
127 PF00135 COesterase: Carboxyle 85.8 0.67 1.4E-05 43.3 3.0 55 114-177 186-243 (535)
128 PLN02761 lipase class 3 family 85.1 2.6 5.6E-05 40.6 6.6 69 111-179 268-342 (527)
129 PF12146 Hydrolase_4: Putative 85.0 5.1 0.00011 28.5 6.7 77 25-121 2-78 (79)
130 PF03283 PAE: Pectinacetyleste 84.8 10 0.00022 34.9 10.1 143 29-180 39-198 (361)
131 PF08237 PE-PPE: PE-PPE domain 84.4 4.1 9E-05 34.9 7.0 61 109-177 28-88 (225)
132 PF11288 DUF3089: Protein of u 84.3 1.8 4E-05 36.8 4.7 62 113-180 76-138 (207)
133 PLN02408 phospholipase A1 83.2 3.3 7.1E-05 38.2 6.2 63 112-179 179-241 (365)
134 KOG1516 Carboxylesterase and r 83.1 3.3 7.1E-05 39.4 6.4 36 116-152 175-213 (545)
135 PF08840 BAAT_C: BAAT / Acyl-C 82.2 2.3 5.1E-05 35.7 4.6 34 123-156 11-44 (213)
136 KOG4569 Predicted lipase [Lipi 81.8 3.1 6.7E-05 37.7 5.5 58 116-179 156-213 (336)
137 smart00824 PKS_TE Thioesterase 81.8 7.6 0.00017 30.6 7.3 64 83-158 25-88 (212)
138 PF05057 DUF676: Putative seri 80.7 2.6 5.6E-05 35.5 4.3 47 111-158 56-102 (217)
139 PLN02802 triacylglycerol lipas 80.7 3.7 8E-05 39.4 5.7 63 112-179 309-371 (509)
140 PF10081 Abhydrolase_9: Alpha/ 80.4 3.7 8.1E-05 36.6 5.3 35 112-146 87-121 (289)
141 PLN02310 triacylglycerol lipas 80.2 4.3 9.4E-05 38.0 5.9 62 113-179 187-249 (405)
142 PLN02847 triacylglycerol lipas 80.1 3.9 8.5E-05 40.1 5.7 61 114-182 234-295 (633)
143 COG4757 Predicted alpha/beta h 79.9 4 8.7E-05 35.8 5.2 67 84-154 58-125 (281)
144 PLN02934 triacylglycerol lipas 79.8 5 0.00011 38.6 6.3 40 115-157 305-344 (515)
145 PLN00413 triacylglycerol lipas 79.3 2.8 6E-05 40.0 4.4 39 116-157 269-307 (479)
146 PLN02162 triacylglycerol lipas 78.9 2.9 6.3E-05 39.8 4.4 39 116-157 263-301 (475)
147 KOG2182 Hydrolytic enzymes of 78.7 11 0.00024 36.1 8.2 67 84-151 119-189 (514)
148 KOG2382 Predicted alpha/beta h 77.7 4.6 0.0001 36.5 5.1 63 85-156 82-144 (315)
149 PF06342 DUF1057: Alpha/beta h 77.3 16 0.00034 32.8 8.3 101 39-178 34-136 (297)
150 PRK14567 triosephosphate isome 77.3 6.9 0.00015 34.3 6.0 60 112-182 179-238 (253)
151 PRK14566 triosephosphate isome 76.4 6.9 0.00015 34.5 5.8 59 113-182 190-248 (260)
152 PF07519 Tannase: Tannase and 74.7 9.4 0.0002 36.3 6.6 83 118-214 103-191 (474)
153 PF00681 Plectin: Plectin repe 74.4 2.6 5.7E-05 26.7 2.0 34 176-209 11-44 (45)
154 PF11187 DUF2974: Protein of u 74.3 5.7 0.00012 34.0 4.6 38 116-157 70-107 (224)
155 PLN03037 lipase class 3 family 72.0 11 0.00024 36.4 6.4 63 113-179 296-359 (525)
156 COG3319 Thioesterase domains o 70.3 28 0.00061 30.5 8.1 89 41-159 1-90 (257)
157 TIGR01838 PHA_synth_I poly(R)- 69.1 33 0.00072 33.2 9.0 83 84-182 221-305 (532)
158 PRK07868 acyl-CoA synthetase; 67.9 17 0.00038 37.5 7.3 22 133-154 140-161 (994)
159 PF01738 DLH: Dienelactone hyd 67.4 3.5 7.7E-05 34.0 1.8 94 39-153 13-117 (218)
160 COG3208 GrsT Predicted thioest 66.6 7.2 0.00016 34.0 3.6 64 85-158 35-98 (244)
161 PLN02429 triosephosphate isome 65.7 14 0.0003 33.5 5.4 59 113-182 240-299 (315)
162 COG0412 Dienelactone hydrolase 65.4 9.7 0.00021 32.6 4.2 44 111-155 90-133 (236)
163 COG0627 Predicted esterase [Ge 64.9 24 0.00051 31.9 6.7 74 80-156 95-174 (316)
164 COG2945 Predicted hydrolase of 64.9 7.3 0.00016 33.1 3.2 58 92-157 68-126 (210)
165 PF06259 Abhydrolase_8: Alpha/ 64.1 12 0.00026 31.0 4.3 41 112-154 89-129 (177)
166 TIGR03712 acc_sec_asp2 accesso 63.1 25 0.00054 33.8 6.7 140 26-208 277-431 (511)
167 PF03959 FSH1: Serine hydrolas 61.9 5.3 0.00012 33.3 1.9 125 39-182 3-148 (212)
168 KOG3101 Esterase D [General fu 61.7 37 0.0008 29.6 6.9 41 9-49 6-53 (283)
169 COG3946 VirJ Type IV secretory 61.1 12 0.00027 35.1 4.3 47 108-157 303-349 (456)
170 PLN02561 triosephosphate isome 60.9 21 0.00045 31.3 5.5 58 113-181 181-239 (253)
171 PF02450 LCAT: Lecithin:choles 60.8 7.1 0.00015 36.0 2.7 24 133-156 118-141 (389)
172 KOG3724 Negative regulator of 60.2 9.7 0.00021 38.7 3.6 34 116-149 161-197 (973)
173 KOG2984 Predicted hydrolase [G 59.7 7.7 0.00017 33.5 2.4 59 84-154 72-134 (277)
174 KOG3079 Uridylate kinase/adeny 59.5 5.2 0.00011 33.6 1.4 16 38-53 5-20 (195)
175 PF12740 Chlorophyllase2: Chlo 57.3 22 0.00049 31.2 5.1 39 135-178 92-130 (259)
176 PF06821 Ser_hydrolase: Serine 57.1 18 0.0004 29.4 4.3 39 133-180 54-92 (171)
177 PF03096 Ndr: Ndr family; Int 55.4 37 0.00081 30.3 6.2 82 80-179 52-134 (283)
178 cd00311 TIM Triosephosphate is 54.8 40 0.00088 29.2 6.2 58 113-182 177-235 (242)
179 PF06309 Torsin: Torsin; Inte 54.4 11 0.00023 29.8 2.3 17 37-53 49-65 (127)
180 PF06028 DUF915: Alpha/beta hy 54.3 31 0.00067 30.1 5.5 61 111-179 83-144 (255)
181 PRK00042 tpiA triosephosphate 54.3 40 0.00087 29.4 6.1 58 113-182 181-239 (250)
182 PF03403 PAF-AH_p_II: Platelet 53.1 8.9 0.00019 35.3 2.0 37 135-182 229-265 (379)
183 KOG4667 Predicted esterase [Li 53.1 72 0.0016 27.9 7.3 122 85-220 64-200 (269)
184 PF05049 IIGP: Interferon-indu 51.3 8.6 0.00019 35.6 1.5 57 39-96 33-97 (376)
185 PF00756 Esterase: Putative es 50.7 9.6 0.00021 31.9 1.7 53 119-182 100-153 (251)
186 COG2936 Predicted acyl esteras 49.4 1.2E+02 0.0025 29.8 8.9 134 17-181 22-161 (563)
187 PRK14565 triosephosphate isome 49.3 39 0.00084 29.3 5.2 52 113-183 175-226 (237)
188 PF03583 LIP: Secretory lipase 48.4 60 0.0013 28.6 6.4 65 113-182 47-116 (290)
189 PF01555 N6_N4_Mtase: DNA meth 45.6 34 0.00074 27.7 4.2 40 85-127 2-41 (231)
190 PF05277 DUF726: Protein of un 43.2 95 0.0021 28.5 7.0 55 120-179 207-261 (345)
191 COG1647 Esterase/lipase [Gener 42.7 1.3E+02 0.0029 26.2 7.3 37 134-182 85-121 (243)
192 KOG2931 Differentiation-relate 42.6 69 0.0015 29.0 5.8 82 79-178 74-156 (326)
193 PRK13962 bifunctional phosphog 42.3 52 0.0011 32.7 5.5 60 112-182 575-635 (645)
194 PF07224 Chlorophyllase: Chlor 40.7 24 0.00052 31.5 2.6 23 134-156 120-142 (307)
195 PF01083 Cutinase: Cutinase; 40.5 32 0.0007 28.1 3.3 65 109-180 59-124 (179)
196 PF07389 DUF1500: Protein of u 40.3 23 0.00049 26.2 2.0 28 114-143 6-33 (100)
197 COG3673 Uncharacterized conser 39.6 28 0.00061 32.0 2.9 23 133-155 121-143 (423)
198 COG3571 Predicted hydrolase of 39.6 20 0.00043 29.9 1.8 29 130-158 85-113 (213)
199 PRK15492 triosephosphate isome 39.2 74 0.0016 27.9 5.5 59 113-183 190-249 (260)
200 COG1770 PtrB Protease II [Amin 38.9 41 0.0009 33.5 4.1 83 113-208 507-597 (682)
201 COG4425 Predicted membrane pro 38.7 44 0.00095 32.1 4.1 35 112-146 375-409 (588)
202 PRK11524 putative methyltransf 38.1 1.2E+02 0.0027 26.4 6.8 51 83-139 27-79 (284)
203 PTZ00333 triosephosphate isome 38.0 64 0.0014 28.2 4.9 59 112-181 183-242 (255)
204 KOG2369 Lecithin:cholesterol a 37.3 34 0.00074 32.7 3.2 41 116-156 163-204 (473)
205 PF09851 SHOCT: Short C-termin 37.1 45 0.00097 19.4 2.6 20 190-209 9-28 (31)
206 COG3596 Predicted GTPase [Gene 36.5 61 0.0013 29.1 4.5 62 39-102 37-104 (296)
207 PF00121 TIM: Triosephosphate 34.9 16 0.00035 31.7 0.6 60 112-182 178-238 (244)
208 COG1075 LipA Predicted acetylt 34.3 67 0.0015 29.0 4.6 44 110-156 106-149 (336)
209 COG2819 Predicted hydrolase of 34.1 46 0.001 29.4 3.3 36 114-149 113-152 (264)
210 COG3545 Predicted esterase of 33.8 1.2E+02 0.0026 25.3 5.5 50 115-178 44-93 (181)
211 PF05576 Peptidase_S37: PS-10 33.6 1.6E+02 0.0034 28.0 6.9 88 38-148 61-148 (448)
212 KOG2565 Predicted hydrolases o 33.5 1.8E+02 0.0039 27.5 7.1 99 39-157 152-252 (469)
213 COG5153 CVT17 Putative lipase 33.4 20 0.00044 32.4 1.0 25 130-154 272-296 (425)
214 KOG4540 Putative lipase essent 33.4 20 0.00044 32.4 1.0 25 130-154 272-296 (425)
215 COG4782 Uncharacterized protei 32.0 1.5E+02 0.0032 27.6 6.3 64 114-182 174-237 (377)
216 PRK06762 hypothetical protein; 31.1 30 0.00064 27.2 1.5 13 41-53 2-14 (166)
217 TIGR03282 methan_mark_13 putat 30.8 4.3E+02 0.0094 24.4 10.8 91 114-212 60-150 (352)
218 KOG1553 Predicted alpha/beta h 30.6 1.7E+02 0.0036 27.5 6.4 40 130-180 307-346 (517)
219 TIGR01618 phage_P_loop phage n 29.8 81 0.0018 26.9 4.1 38 32-69 3-41 (220)
220 PF09292 Neil1-DNA_bind: Endon 27.7 37 0.0008 21.0 1.2 12 40-51 24-35 (39)
221 PF10929 DUF2811: Protein of u 27.5 56 0.0012 22.1 2.1 23 112-134 5-27 (57)
222 PRK10949 protease 4; Provision 27.5 92 0.002 30.8 4.5 69 85-176 116-186 (618)
223 TIGR03598 GTPase_YsxC ribosome 26.8 3.1E+02 0.0068 21.5 7.4 57 39-98 16-77 (179)
224 PLN02517 phosphatidylcholine-s 26.8 57 0.0012 32.3 2.9 22 133-154 212-233 (642)
225 COG0149 TpiA Triosephosphate i 26.4 2.1E+02 0.0045 25.1 6.1 75 86-183 162-239 (251)
226 PLN02633 palmitoyl protein thi 26.3 2.4E+02 0.0052 25.6 6.6 44 109-157 74-117 (314)
227 COG0218 Predicted GTPase [Gene 26.1 1.2E+02 0.0026 25.7 4.4 80 39-130 23-106 (200)
228 KOG2170 ATPase of the AAA+ sup 24.8 58 0.0013 29.7 2.3 45 115-159 192-240 (344)
229 PF09949 DUF2183: Uncharacteri 24.0 2.8E+02 0.0061 20.6 5.7 37 118-159 52-88 (100)
230 PF12532 DUF3732: Protein of u 23.7 1.2E+02 0.0026 25.3 4.0 60 83-143 100-167 (193)
231 PRK14905 triosephosphate isome 23.2 1.8E+02 0.0039 26.7 5.3 60 112-183 190-250 (355)
232 COG3896 Chloramphenicol 3-O-ph 23.1 73 0.0016 26.6 2.4 28 39-66 21-52 (205)
233 COG3150 Predicted esterase [Ge 22.7 71 0.0015 26.7 2.3 41 108-155 40-80 (191)
234 PF01583 APS_kinase: Adenylyls 21.8 54 0.0012 26.5 1.5 14 40-53 1-14 (156)
235 PRK14731 coaE dephospho-CoA ki 21.2 1.4E+02 0.0029 24.8 3.8 32 39-70 3-36 (208)
236 smart00250 PLEC Plectin repeat 21.2 44 0.00094 20.1 0.6 27 176-202 11-37 (38)
237 PF15613 WHIM2: WSTF, HB1, Itc 21.0 2E+02 0.0042 17.7 3.5 26 26-51 12-38 (38)
238 PRK05354 arginine decarboxylas 20.4 7.1E+02 0.015 24.8 9.1 59 84-149 282-346 (634)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=6e-72 Score=516.57 Aligned_cols=209 Identities=44% Similarity=0.862 Sum_probs=195.8
Q ss_pred CCccC-CccceEEEEEcCCCCCceEEEEEEEecCCC-CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCC-Cceeeccccc
Q 038976 4 GVSVE-DLGHHAGYYKLPHSHDAKMFYFFFESRNSK-KDPVVIWLTGGPGCSSELAVFYENGPFSIADN-MSLVWNEHGW 80 (220)
Q Consensus 4 ~~~~~-~~~~ysGyl~v~~~~~~~lFy~~~~s~~~~-~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~-~~l~~n~~sW 80 (220)
|+..+ ++++|||||+|+...+++|||||+||+++| ++||||||||||||||+.|+|.|+|||+|+.+ .+|..|++||
T Consensus 35 G~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySW 114 (454)
T KOG1282|consen 35 GQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSW 114 (454)
T ss_pred CCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccc
Confidence 34443 699999999999888999999999999988 89999999999999999999999999999965 6799999999
Q ss_pred ccccceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHcccc
Q 038976 81 DKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNK 160 (220)
Q Consensus 81 ~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~ 160 (220)
+|.|||||||||+||||||+++..++..+++.+|+|+++||++||++||||++|+|||+||||||||||+||++|++.|+
T Consensus 115 nk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~ 194 (454)
T KOG1282|consen 115 NKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNK 194 (454)
T ss_pred cccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccc
Confidence 99999999999999999999988777788999999999999999999999999999999999999999999999999997
Q ss_pred CCCCceeeeeEEEEeccCCChhccccchhHHHHhCCCCCHHHHHHHHhhhHH
Q 038976 161 AKEGIHINLKGFAIGNGLTDPGVQYKAYPDYALDMGIINKSQYNRISKIIPV 212 (220)
Q Consensus 161 ~~~~~~inLkGi~igng~~dp~~q~~~~~~~~~~~gli~~~~~~~~~~~~~~ 212 (220)
....+.|||||++||||++|+..|..++.+|+|.||+|++++++.|++.+..
T Consensus 195 ~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~ 246 (454)
T KOG1282|consen 195 KCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDF 246 (454)
T ss_pred cccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhcc
Confidence 5455789999999999999999999999999999999999999999986544
No 2
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=9.9e-69 Score=487.19 Aligned_cols=207 Identities=46% Similarity=0.898 Sum_probs=180.2
Q ss_pred CCccC-CccceEEEEEcCCCCCceEEEEEEEecCCC-CCCEEEEEcCCCChHHHhHHhhhcCCeEEc--CCCceeecccc
Q 038976 4 GVSVE-DLGHHAGYYKLPHSHDAKMFYFFFESRNSK-KDPVVIWLTGGPGCSSELAVFYENGPFSIA--DNMSLVWNEHG 79 (220)
Q Consensus 4 ~~~~~-~~~~ysGyl~v~~~~~~~lFy~~~~s~~~~-~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~--~~~~l~~n~~s 79 (220)
|++.+ ++++|||||+|+.+..++|||||||+++++ ++||+|||||||||||+.|+|.|+|||+++ .+.+++.|++|
T Consensus 2 g~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~s 81 (415)
T PF00450_consen 2 GLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYS 81 (415)
T ss_dssp T-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-
T ss_pred CCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccccCceEEeecccccccccccc
Confidence 45566 799999999999888899999999999887 999999999999999999999999999999 45899999999
Q ss_pred cccccceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccc
Q 038976 80 WDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGN 159 (220)
Q Consensus 80 W~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n 159 (220)
|++++||||||||+||||||.........+++++|+|+++||++||.+||+++++|+||+||||||+|||.+|.+|++++
T Consensus 82 W~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~ 161 (415)
T PF00450_consen 82 WNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQN 161 (415)
T ss_dssp GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHT
T ss_pred cccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcc
Confidence 99999999999999999999988766667889999999999999999999999999999999999999999999999998
Q ss_pred cCCCCceeeeeEEEEeccCCChhccccchhHHHHhCCCCCHHHHHHHHhhh
Q 038976 160 KAKEGIHINLKGFAIGNGLTDPGVQYKAYPDYALDMGIINKSQYNRISKII 210 (220)
Q Consensus 160 ~~~~~~~inLkGi~igng~~dp~~q~~~~~~~~~~~gli~~~~~~~~~~~~ 210 (220)
+....+.||||||+||||++||..|..++.+|++.+|+|++++++++++.+
T Consensus 162 ~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~ 212 (415)
T PF00450_consen 162 KKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKAC 212 (415)
T ss_dssp CC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHH
T ss_pred ccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHh
Confidence 765456899999999999999999999999999999999999999998776
No 3
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=1.6e-64 Score=468.18 Aligned_cols=209 Identities=32% Similarity=0.694 Sum_probs=189.9
Q ss_pred CccceEEEEEcCCCCCceEEEEEEEecCCC-CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCC------Cceeecccccc
Q 038976 9 DLGHHAGYYKLPHSHDAKMFYFFFESRNSK-KDPVVIWLTGGPGCSSELAVFYENGPFSIADN------MSLVWNEHGWD 81 (220)
Q Consensus 9 ~~~~ysGyl~v~~~~~~~lFy~~~~s~~~~-~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~------~~l~~n~~sW~ 81 (220)
++++||||++|+.+.+.+|||||||+++++ ++|++|||||||||||+.|+|.|+|||+++.+ .++++|++||+
T Consensus 36 ~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~ 115 (437)
T PLN02209 36 PFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWT 115 (437)
T ss_pred CeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchh
Confidence 589999999998777789999999999888 89999999999999999999999999999864 37999999999
Q ss_pred cccceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccC
Q 038976 82 KASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKA 161 (220)
Q Consensus 82 ~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~ 161 (220)
+.+||||||||+||||||+...... .++++.++|+++||++||++||+|+++|+||+||||||||||.+|++|.++|+.
T Consensus 116 ~~anllfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~ 194 (437)
T PLN02209 116 KTANIIFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYI 194 (437)
T ss_pred hcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhccc
Confidence 9999999999999999998765443 345567899999999999999999999999999999999999999999988765
Q ss_pred CCCceeeeeEEEEeccCCChhccccchhHHHHhCCCCCHHHHHHHHhhhHH-----------HHHHHh
Q 038976 162 KEGIHINLKGFAIGNGLTDPGVQYKAYPDYALDMGIINKSQYNRISKIIPV-----------CELAIK 218 (220)
Q Consensus 162 ~~~~~inLkGi~igng~~dp~~q~~~~~~~~~~~gli~~~~~~~~~~~~~~-----------c~~~~~ 218 (220)
..+++||||||+||||++||..|..++.+|++.+|||+++++++|++.+.. |+++++
T Consensus 195 ~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~~~C~~~i~ 262 (437)
T PLN02209 195 CCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSNKKCLKLVE 262 (437)
T ss_pred ccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCChHHHHHHHH
Confidence 455689999999999999999999999999999999999999999987643 877765
No 4
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=2.4e-63 Score=463.57 Aligned_cols=215 Identities=44% Similarity=0.886 Sum_probs=197.7
Q ss_pred CccCCccceEEEEEcCC-CCCceEEEEEEEecCCC-CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCC-Cceeecccccc
Q 038976 5 VSVEDLGHHAGYYKLPH-SHDAKMFYFFFESRNSK-KDPVVIWLTGGPGCSSELAVFYENGPFSIADN-MSLVWNEHGWD 81 (220)
Q Consensus 5 ~~~~~~~~ysGyl~v~~-~~~~~lFy~~~~s~~~~-~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~-~~l~~n~~sW~ 81 (220)
+|..++++|+|||+|++ ....+|||||||+++++ ++||+|||||||||||+.|+|.|+|||+|+++ .+++.|++||+
T Consensus 40 ~~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~ 119 (462)
T PTZ00472 40 PCDPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWN 119 (462)
T ss_pred ccCCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccc
Confidence 44458999999999975 44689999999999888 99999999999999999999999999999976 68999999999
Q ss_pred cccceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccC
Q 038976 82 KASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKA 161 (220)
Q Consensus 82 ~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~ 161 (220)
+.+||||||||+||||||+... +...+++++++|+++||+.||++||+++.+++||+||||||+|+|.+|.+|+++|+.
T Consensus 120 ~~~~~l~iDqP~G~G~S~~~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~ 198 (462)
T PTZ00472 120 NEAYVIYVDQPAGVGFSYADKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKK 198 (462)
T ss_pred cccCeEEEeCCCCcCcccCCCC-CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccc
Confidence 9999999999999999998654 345677889999999999999999999999999999999999999999999998876
Q ss_pred CCCceeeeeEEEEeccCCChhccccchhHHHHh-------CCCCCHHHHHHHHhhhHHHHHHHhcC
Q 038976 162 KEGIHINLKGFAIGNGLTDPGVQYKAYPDYALD-------MGIINKSQYNRISKIIPVCELAIKLC 220 (220)
Q Consensus 162 ~~~~~inLkGi~igng~~dp~~q~~~~~~~~~~-------~gli~~~~~~~~~~~~~~c~~~~~~c 220 (220)
.+..+||||||+|||||+||..|..++.+|+|. +|+|+++++++|++..+.|.+.++.|
T Consensus 199 ~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c 264 (462)
T PTZ00472 199 GDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKEC 264 (462)
T ss_pred cCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhc
Confidence 556789999999999999999999999999995 58999999999999999999988877
No 5
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=2e-63 Score=460.60 Aligned_cols=201 Identities=32% Similarity=0.665 Sum_probs=183.7
Q ss_pred CccceEEEEEcCCCCCceEEEEEEEecCCC-CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCC------Cceeecccccc
Q 038976 9 DLGHHAGYYKLPHSHDAKMFYFFFESRNSK-KDPVVIWLTGGPGCSSELAVFYENGPFSIADN------MSLVWNEHGWD 81 (220)
Q Consensus 9 ~~~~ysGyl~v~~~~~~~lFy~~~~s~~~~-~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~------~~l~~n~~sW~ 81 (220)
++++||||++|+...+.+|||||||+++++ ++|++|||||||||||+.|+|.|+|||+++.. .++++|++||+
T Consensus 34 ~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~ 113 (433)
T PLN03016 34 PFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWT 113 (433)
T ss_pred CeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchh
Confidence 589999999998766789999999999888 99999999999999999999999999998632 47899999999
Q ss_pred cccceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccC
Q 038976 82 KASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKA 161 (220)
Q Consensus 82 ~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~ 161 (220)
+.|||||||||+||||||+...... .++.+.|+|+++||++||++||+|+++|+||+||||||||||.+|++|.++|+.
T Consensus 114 ~~anllfiDqPvGtGfSy~~~~~~~-~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~ 192 (433)
T PLN03016 114 KMANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 192 (433)
T ss_pred hcCcEEEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhccc
Confidence 9999999999999999998765443 344456699999999999999999999999999999999999999999998865
Q ss_pred CCCceeeeeEEEEeccCCChhccccchhHHHHhCCCCCHHHHHHHHhhh
Q 038976 162 KEGIHINLKGFAIGNGLTDPGVQYKAYPDYALDMGIINKSQYNRISKII 210 (220)
Q Consensus 162 ~~~~~inLkGi~igng~~dp~~q~~~~~~~~~~~gli~~~~~~~~~~~~ 210 (220)
...++||||||+||||++||..|..++.+|+|.+|||+++++++|++.+
T Consensus 193 ~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c 241 (433)
T PLN03016 193 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRIC 241 (433)
T ss_pred ccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHh
Confidence 4556899999999999999999999999999999999999999998864
No 6
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=8e-50 Score=368.20 Aligned_cols=206 Identities=36% Similarity=0.654 Sum_probs=174.2
Q ss_pred CccceEEEEEcCCCCCceEEEEEEEecCCC-CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCcee--ecccccccccc
Q 038976 9 DLGHHAGYYKLPHSHDAKMFYFFFESRNSK-KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLV--WNEHGWDKASN 85 (220)
Q Consensus 9 ~~~~ysGyl~v~~~~~~~lFy~~~~s~~~~-~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~--~n~~sW~~~an 85 (220)
.+++|+||.... ..+|||.|+++++| ++|+||||||||||||+.|+|.|+||++|+.+.+.. .||+||++++|
T Consensus 73 pv~~~~g~~d~e----d~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~ad 148 (498)
T COG2939 73 PVRDYTGYPDAE----DFFFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFAD 148 (498)
T ss_pred chhhccCCcccc----eeEEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCc
Confidence 356777773332 23999999998888 999999999999999999999999999999763333 59999999999
Q ss_pred eeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCC--CEEEEeecCcccchhHHHHHHHccccCCC
Q 038976 86 LLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAEN--DFYITGESYAGHYIPAFAARVHNGNKAKE 163 (220)
Q Consensus 86 vlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~--~~yi~GeSYgG~yvp~la~~i~~~n~~~~ 163 (220)
|||||||+|||||++. +.+...+.+.+.+|+..|++.||+.||++.+. |+||+||||||+|+|.+|++|+++|.. .
T Consensus 149 LvFiDqPvGTGfS~a~-~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~-~ 226 (498)
T COG2939 149 LVFIDQPVGTGFSRAL-GDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIA-L 226 (498)
T ss_pred eEEEecCcccCccccc-ccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccc-c
Confidence 9999999999999983 33345778889999999999999999999887 999999999999999999999998643 2
Q ss_pred CceeeeeEEEEecc-CCChhccccchhHHHHhC----CCCCHHHHHHHHhh--hHHHHHHHhcC
Q 038976 164 GIHINLKGFAIGNG-LTDPGVQYKAYPDYALDM----GIINKSQYNRISKI--IPVCELAIKLC 220 (220)
Q Consensus 164 ~~~inLkGi~igng-~~dp~~q~~~~~~~~~~~----gli~~~~~~~~~~~--~~~c~~~~~~c 220 (220)
+-.+||++++|||| +|||..|+..|..++... +..+.+.++++++. .+-|..+++.|
T Consensus 227 ~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~ 290 (498)
T COG2939 227 NGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGC 290 (498)
T ss_pred CCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCC
Confidence 34699999999999 999999999999999854 46677788888773 34566666655
No 7
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.7e-43 Score=307.49 Aligned_cols=198 Identities=27% Similarity=0.524 Sum_probs=181.5
Q ss_pred EEEEEcCCCCCceEEEEEEEecCCC--CCCEEEEEcCCCChHHH-hHHhhhcCCeEEcCCCceeecccccccccceeEEe
Q 038976 14 AGYYKLPHSHDAKMFYFFFESRNSK--KDPVVIWLTGGPGCSSE-LAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVD 90 (220)
Q Consensus 14 sGyl~v~~~~~~~lFy~~~~s~~~~--~~Pl~lwlnGGPG~SS~-~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiD 90 (220)
-||++|. .++|||||.|.+..+- .+|+.||++||||+||. +|+|.|+||...+ +.+|+.+|.+.|+|||||
T Consensus 5 wg~v~vr--~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~----~~~r~~TWlk~adllfvD 78 (414)
T KOG1283|consen 5 WGYVDVR--TGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD----GSPRDWTWLKDADLLFVD 78 (414)
T ss_pred ccceeee--cCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC----CCcCCchhhhhccEEEec
Confidence 4888885 4679999999987543 89999999999999984 7999999999754 578999999999999999
Q ss_pred CCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeee
Q 038976 91 QPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLK 170 (220)
Q Consensus 91 qP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLk 170 (220)
.|||+||||.+..+.+.++.+++|.|+.+.|+.||..||+|+.+||||+-|||||++++.+|..+.+..+++ ..+.|+.
T Consensus 79 nPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G-~i~~nf~ 157 (414)
T KOG1283|consen 79 NPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRG-EIKLNFI 157 (414)
T ss_pred CCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcC-ceeecce
Confidence 999999999988888888999999999999999999999999999999999999999999999998877653 3679999
Q ss_pred EEEEeccCCChhccccchhHHHHhCCCCCHHHHHHHHhhhHHHHHHHh
Q 038976 171 GFAIGNGLTDPGVQYKAYPDYALDMGIINKSQYNRISKIIPVCELAIK 218 (220)
Q Consensus 171 Gi~igng~~dp~~q~~~~~~~~~~~gli~~~~~~~~~~~~~~c~~~~~ 218 (220)
||++|+.||+|..-..++.+|+++.+++|+...+..++..++|++.+.
T Consensus 158 ~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~ 205 (414)
T KOG1283|consen 158 GVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVD 205 (414)
T ss_pred eEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhccccc
Confidence 999999999999999999999999999999999999998899988765
No 8
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=1.8e-38 Score=283.68 Aligned_cols=127 Identities=31% Similarity=0.588 Sum_probs=115.0
Q ss_pred ccceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCC
Q 038976 83 ASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAK 162 (220)
Q Consensus 83 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~ 162 (220)
+|||||||||+||||||+.+.... .+++++|+|++.||+.||++||+|+++||||+||||||||||.+|++|+++|+..
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~-~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK-TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 489999999999999998765443 3455566999999999999999999999999999999999999999999888654
Q ss_pred CCceeeeeEEEEeccCCChhccccchhHHHHhCCCCCHHHHHHHHhhh
Q 038976 163 EGIHINLKGFAIGNGLTDPGVQYKAYPDYALDMGIINKSQYNRISKII 210 (220)
Q Consensus 163 ~~~~inLkGi~igng~~dp~~q~~~~~~~~~~~gli~~~~~~~~~~~~ 210 (220)
+.++||||||+|||||+||..|..++.+|+|.+|+|++++++.|++.+
T Consensus 80 ~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c 127 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRIC 127 (319)
T ss_pred cCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhc
Confidence 556799999999999999999999999999999999999999998764
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.70 E-value=9.8e-08 Score=79.12 Aligned_cols=116 Identities=21% Similarity=0.242 Sum_probs=74.5
Q ss_pred EEEEEEecCCCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCccc
Q 038976 28 FYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIR 107 (220)
Q Consensus 28 Fy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~ 107 (220)
+|..+..+ +++.|+||++||.+|.+..+..+.+ -+.+..+++-+|.| |.|.|...... .
T Consensus 2 ~~~~~~~~-~~~~~~iv~lhG~~~~~~~~~~~~~-----------------~l~~~~~vi~~D~~-G~G~S~~~~~~--~ 60 (257)
T TIGR03611 2 HYELHGPP-DADAPVVVLSSGLGGSGSYWAPQLD-----------------VLTQRFHVVTYDHR-GTGRSPGELPP--G 60 (257)
T ss_pred EEEEecCC-CCCCCEEEEEcCCCcchhHHHHHHH-----------------HHHhccEEEEEcCC-CCCCCCCCCcc--c
Confidence 34554432 2478999999999887765533221 12345789999985 99999643222 1
Q ss_pred ccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCCh
Q 038976 108 HNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDP 181 (220)
Q Consensus 108 ~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp 181 (220)
.+.++.++|+.+++ +. ++..+++|+|+|+||..+..+|.+..+ .++++++.+++.++
T Consensus 61 ~~~~~~~~~~~~~i----~~---~~~~~~~l~G~S~Gg~~a~~~a~~~~~----------~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 61 YSIAHMADDVLQLL----DA---LNIERFHFVGHALGGLIGLQLALRYPE----------RLLSLVLINAWSRP 117 (257)
T ss_pred CCHHHHHHHHHHHH----HH---hCCCcEEEEEechhHHHHHHHHHHChH----------HhHHheeecCCCCC
Confidence 24444555655555 32 234579999999999998888865321 36777777776543
No 10
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.69 E-value=1.5e-07 Score=78.91 Aligned_cols=129 Identities=24% Similarity=0.373 Sum_probs=76.8
Q ss_pred eEEEEEcCCCCCceEEEEEEEecCCCCCCEEEEEcCCCChHHHh-HHhhhcCCeEEcCCCceeecccccccccceeEEeC
Q 038976 13 HAGYYKLPHSHDAKMFYFFFESRNSKKDPVVIWLTGGPGCSSEL-AVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQ 91 (220)
Q Consensus 13 ysGyl~v~~~~~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~-g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDq 91 (220)
..++++++. ..+.|..+.. ....|.||+++|+||++..+ ..+.+. +. .+-.+++.+|.
T Consensus 3 ~~~~~~~~~---~~~~~~~~~~--~~~~~~vl~~hG~~g~~~~~~~~~~~~----------l~------~~g~~vi~~d~ 61 (288)
T TIGR01250 3 IEGIITVDG---GYHLFTKTGG--EGEKIKLLLLHGGPGMSHEYLENLREL----------LK------EEGREVIMYDQ 61 (288)
T ss_pred ccceecCCC---CeEEEEeccC--CCCCCeEEEEcCCCCccHHHHHHHHHH----------HH------hcCCEEEEEcC
Confidence 456666643 2343333221 12468889999999987642 222110 00 01478999998
Q ss_pred CCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeE
Q 038976 92 PTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKG 171 (220)
Q Consensus 92 P~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkG 171 (220)
| |.|.|..........+.+..++|+..++ +. +..++++|+|+|+||..+..+|..-. ..+++
T Consensus 62 ~-G~G~s~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~liG~S~Gg~ia~~~a~~~p----------~~v~~ 123 (288)
T TIGR01250 62 L-GCGYSDQPDDSDELWTIDYFVDELEEVR----EK---LGLDKFYLLGHSWGGMLAQEYALKYG----------QHLKG 123 (288)
T ss_pred C-CCCCCCCCCcccccccHHHHHHHHHHHH----HH---cCCCcEEEEEeehHHHHHHHHHHhCc----------cccce
Confidence 6 9999864322110123445555554444 32 33457999999999999888886421 34778
Q ss_pred EEEeccCCC
Q 038976 172 FAIGNGLTD 180 (220)
Q Consensus 172 i~igng~~d 180 (220)
+++.++...
T Consensus 124 lvl~~~~~~ 132 (288)
T TIGR01250 124 LIISSMLDS 132 (288)
T ss_pred eeEeccccc
Confidence 888877543
No 11
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.63 E-value=2.3e-07 Score=78.09 Aligned_cols=110 Identities=18% Similarity=0.198 Sum_probs=75.0
Q ss_pred EEEEEecCCCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccc
Q 038976 29 YFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRH 108 (220)
Q Consensus 29 y~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~ 108 (220)
|...+..+.+++|.||++||.+|.+..+..+.+ .+.+..+++.+|.| |.|.|.... ..
T Consensus 5 ~~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~-----------------~l~~~~~vi~~D~~-G~G~s~~~~----~~ 62 (255)
T PRK10673 5 IRAQTAQNPHNNSPIVLVHGLFGSLDNLGVLAR-----------------DLVNDHDIIQVDMR-NHGLSPRDP----VM 62 (255)
T ss_pred eeeccCCCCCCCCCEEEECCCCCchhHHHHHHH-----------------HHhhCCeEEEECCC-CCCCCCCCC----CC
Confidence 333334333488999999999988776543321 13345799999985 999886422 13
Q ss_pred cccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEecc
Q 038976 109 NENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNG 177 (220)
Q Consensus 109 ~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 177 (220)
+.++.++|+.++|..+ ..++++|+|+|+||..+..+|.+.. -.++++++.+.
T Consensus 63 ~~~~~~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~----------~~v~~lvli~~ 114 (255)
T PRK10673 63 NYPAMAQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAP----------DRIDKLVAIDI 114 (255)
T ss_pred CHHHHHHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCH----------hhcceEEEEec
Confidence 5566778887777442 3357999999999999888886532 24777777653
No 12
>PHA02857 monoglyceride lipase; Provisional
Probab=98.52 E-value=9.8e-07 Score=75.76 Aligned_cols=124 Identities=10% Similarity=0.092 Sum_probs=80.7
Q ss_pred CceEEEEEEEecCCCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeeccccccc-ccceeEEeCCCCcccccccC
Q 038976 24 DAKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDK-ASNLLYVDQPTGTGFSYTSD 102 (220)
Q Consensus 24 ~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~-~anvlfiDqP~G~GfSy~~~ 102 (220)
+..|++.+++.. +..+|+||.+||..+.+..+-.+.+ .+.+ -..++-+|.| |.|.|-...
T Consensus 10 g~~l~~~~~~~~-~~~~~~v~llHG~~~~~~~~~~~~~-----------------~l~~~g~~via~D~~-G~G~S~~~~ 70 (276)
T PHA02857 10 NDYIYCKYWKPI-TYPKALVFISHGAGEHSGRYEELAE-----------------NISSLGILVFSHDHI-GHGRSNGEK 70 (276)
T ss_pred CCEEEEEeccCC-CCCCEEEEEeCCCccccchHHHHHH-----------------HHHhCCCEEEEccCC-CCCCCCCcc
Confidence 457999888775 2356899999999776665533321 1333 3679999975 999985422
Q ss_pred CCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCCh
Q 038976 103 KRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDP 181 (220)
Q Consensus 103 ~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp 181 (220)
. ...+.....+|+.+++..+.+. +...+++|+|+|.||..+..+|.+- .-+++++++.+|.+++
T Consensus 71 ~--~~~~~~~~~~d~~~~l~~~~~~---~~~~~~~lvG~S~GG~ia~~~a~~~----------p~~i~~lil~~p~~~~ 134 (276)
T PHA02857 71 M--MIDDFGVYVRDVVQHVVTIKST---YPGVPVFLLGHSMGATISILAAYKN----------PNLFTAMILMSPLVNA 134 (276)
T ss_pred C--CcCCHHHHHHHHHHHHHHHHhh---CCCCCEEEEEcCchHHHHHHHHHhC----------ccccceEEEecccccc
Confidence 1 1112233456666666444333 4456899999999998776666431 1248999999987764
No 13
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.48 E-value=1e-06 Score=76.61 Aligned_cols=105 Identities=16% Similarity=0.132 Sum_probs=71.8
Q ss_pred CCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCc----ccccccchHH
Q 038976 40 DPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRD----IRHNENGVSN 115 (220)
Q Consensus 40 ~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~----~~~~~~~~a~ 115 (220)
.|.||++||.++.+.++..+.+ .+.+.++++.+|.| |.|.|....... ...+.++.++
T Consensus 29 ~~~vlllHG~~~~~~~w~~~~~-----------------~L~~~~~vi~~Dlp-G~G~S~~~~~~~~~~~~~~~~~~~a~ 90 (294)
T PLN02824 29 GPALVLVHGFGGNADHWRKNTP-----------------VLAKSHRVYAIDLL-GYGYSDKPNPRSAPPNSFYTFETWGE 90 (294)
T ss_pred CCeEEEECCCCCChhHHHHHHH-----------------HHHhCCeEEEEcCC-CCCCCCCCccccccccccCCHHHHHH
Confidence 4789999999998887654432 13455689999986 999996433211 1134455566
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 116 DLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 116 d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
|+.++|.+. ..++++|+|+|.||..+-.+|.+-. -.++++++.|+..
T Consensus 91 ~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p----------~~v~~lili~~~~ 137 (294)
T PLN02824 91 QLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAP----------ELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhCh----------hheeEEEEECCCc
Confidence 666555433 3468999999999998877776532 2478888888754
No 14
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.47 E-value=3.7e-06 Score=73.51 Aligned_cols=132 Identities=17% Similarity=0.210 Sum_probs=81.1
Q ss_pred CCccceEEEEEcCCCCC--ceEEEEEEEecCCCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccc-ccc
Q 038976 8 EDLGHHAGYYKLPHSHD--AKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWD-KAS 84 (220)
Q Consensus 8 ~~~~~ysGyl~v~~~~~--~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~-~~a 84 (220)
..++..-.|+.++...+ .+++|. +. .+++.|.||++||.|+.+..+..+.. . .. +..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~i~y~--~~-G~~~~~~lvliHG~~~~~~~w~~~~~---~--------------L~~~gy 74 (302)
T PRK00870 15 PDYPFAPHYVDVDDGDGGPLRMHYV--DE-GPADGPPVLLLHGEPSWSYLYRKMIP---I--------------LAAAGH 74 (302)
T ss_pred cCCCCCceeEeecCCCCceEEEEEE--ec-CCCCCCEEEEECCCCCchhhHHHHHH---H--------------HHhCCC
Confidence 34555567888876333 345544 22 23457889999999887776543321 0 11 247
Q ss_pred ceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCC
Q 038976 85 NLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEG 164 (220)
Q Consensus 85 nvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~ 164 (220)
+++.+|.| |.|.|-..... ...+.+..++|+.+ ++++ +..+++.|+|||+||..+-.+|.+-.
T Consensus 75 ~vi~~Dl~-G~G~S~~~~~~-~~~~~~~~a~~l~~----~l~~---l~~~~v~lvGhS~Gg~ia~~~a~~~p-------- 137 (302)
T PRK00870 75 RVIAPDLI-GFGRSDKPTRR-EDYTYARHVEWMRS----WFEQ---LDLTDVTLVCQDWGGLIGLRLAAEHP-------- 137 (302)
T ss_pred EEEEECCC-CCCCCCCCCCc-ccCCHHHHHHHHHH----HHHH---cCCCCEEEEEEChHHHHHHHHHHhCh--------
Confidence 89999985 99998432111 11233444555544 4443 34458999999999998887776421
Q ss_pred ceeeeeEEEEeccC
Q 038976 165 IHINLKGFAIGNGL 178 (220)
Q Consensus 165 ~~inLkGi~igng~ 178 (220)
-.++++++.++.
T Consensus 138 --~~v~~lvl~~~~ 149 (302)
T PRK00870 138 --DRFARLVVANTG 149 (302)
T ss_pred --hheeEEEEeCCC
Confidence 247777777653
No 15
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.43 E-value=1.9e-06 Score=72.91 Aligned_cols=105 Identities=15% Similarity=0.129 Sum_probs=69.3
Q ss_pred CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHHH
Q 038976 39 KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLY 118 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~ 118 (220)
+.|+||++||.+|.+..+..+.+ ...+..+++.+|.| |.|.|...... ..+.+..++|+.
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~-----------------~l~~~~~vi~~D~~-G~G~S~~~~~~--~~~~~~~~~~l~ 86 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMP-----------------PLARSFRVVAPDLP-GHGFTRAPFRF--RFTLPSMAEDLS 86 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHH-----------------HHhhCcEEEeecCC-CCCCCCCcccc--CCCHHHHHHHHH
Confidence 56899999999887766533321 11234789999985 99988643321 234555666766
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCC
Q 038976 119 DFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTD 180 (220)
Q Consensus 119 ~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d 180 (220)
+++++ +..++++|+|+|+||..+..+|.+.. ..++++++.++..+
T Consensus 87 ~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~p----------~~v~~~v~~~~~~~ 131 (278)
T TIGR03056 87 ALCAA-------EGLSPDGVIGHSAGAAIALRLALDGP----------VTPRMVVGINAALM 131 (278)
T ss_pred HHHHH-------cCCCCceEEEECccHHHHHHHHHhCC----------cccceEEEEcCccc
Confidence 65532 23357899999999988777765421 24677787777554
No 16
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.43 E-value=2.5e-06 Score=76.53 Aligned_cols=125 Identities=13% Similarity=0.165 Sum_probs=79.9
Q ss_pred CceEEEEEEEecCCCCCCEEEEEcCCCChHHHh-HHhhhcCCeEEcCCCceeeccccccc-ccceeEEeCCCCccccccc
Q 038976 24 DAKMFYFFFESRNSKKDPVVIWLTGGPGCSSEL-AVFYENGPFSIADNMSLVWNEHGWDK-ASNLLYVDQPTGTGFSYTS 101 (220)
Q Consensus 24 ~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~-g~~~e~GP~~i~~~~~l~~n~~sW~~-~anvlfiDqP~G~GfSy~~ 101 (220)
+..+|+..+...+.+.+|+||++||..+.++.+ -.+. ..+.+ -.+|+-+|.| |.|.|-..
T Consensus 71 g~~l~~~~~~p~~~~~~~~iv~lHG~~~~~~~~~~~~~-----------------~~l~~~g~~v~~~D~~-G~G~S~~~ 132 (349)
T PLN02385 71 GVEIFSKSWLPENSRPKAAVCFCHGYGDTCTFFFEGIA-----------------RKIASSGYGVFAMDYP-GFGLSEGL 132 (349)
T ss_pred CCEEEEEEEecCCCCCCeEEEEECCCCCccchHHHHHH-----------------HHHHhCCCEEEEecCC-CCCCCCCC
Confidence 557877766544334679999999986654431 1111 01223 3689999995 99998532
Q ss_pred CCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 102 DKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 102 ~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
. ....+.+..++|+.++++. +...+++...+++|+|||+||..+-.+|.+-. -.++|+++.+|..
T Consensus 133 ~--~~~~~~~~~~~dv~~~l~~-l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p----------~~v~glVLi~p~~ 197 (349)
T PLN02385 133 H--GYIPSFDDLVDDVIEHYSK-IKGNPEFRGLPSFLFGQSMGGAVALKVHLKQP----------NAWDGAILVAPMC 197 (349)
T ss_pred C--CCcCCHHHHHHHHHHHHHH-HHhccccCCCCEEEEEeccchHHHHHHHHhCc----------chhhheeEecccc
Confidence 2 2223455677787777744 34444565668999999999988766654311 2478888887754
No 17
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.42 E-value=1.1e-06 Score=70.49 Aligned_cols=104 Identities=21% Similarity=0.244 Sum_probs=69.7
Q ss_pred EEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHHHHHHH
Q 038976 43 VIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQ 122 (220)
Q Consensus 43 ~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~ 122 (220)
||++||.++.+..+..+.+ .+.+..+++.+|.| |.|.|-.... ....+.++.++|+.++|
T Consensus 1 vv~~hG~~~~~~~~~~~~~-----------------~l~~~~~v~~~d~~-G~G~s~~~~~-~~~~~~~~~~~~l~~~l- 60 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAE-----------------ALARGYRVIAFDLP-GHGRSDPPPD-YSPYSIEDYAEDLAELL- 60 (228)
T ss_dssp EEEE-STTTTGGGGHHHHH-----------------HHHTTSEEEEEECT-TSTTSSSHSS-GSGGSHHHHHHHHHHHH-
T ss_pred eEEECCCCCCHHHHHHHHH-----------------HHhCCCEEEEEecC-Cccccccccc-cCCcchhhhhhhhhhcc-
Confidence 6899999988866544332 12256789999986 9999865432 11223444455555444
Q ss_pred HHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 123 AFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 123 ~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
++.. .++++|+|+|+||..+-.+|.+.. -.++++++.++.....
T Consensus 61 ---~~~~---~~~~~lvG~S~Gg~~a~~~a~~~p----------~~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 61 ---DALG---IKKVILVGHSMGGMIALRLAARYP----------DRVKGLVLLSPPPPLP 104 (228)
T ss_dssp ---HHTT---TSSEEEEEETHHHHHHHHHHHHSG----------GGEEEEEEESESSSHH
T ss_pred ---cccc---cccccccccccccccccccccccc----------cccccceeeccccccc
Confidence 5432 268999999999999988886632 2689999999988643
No 18
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.41 E-value=3.3e-06 Score=74.86 Aligned_cols=138 Identities=14% Similarity=0.136 Sum_probs=84.9
Q ss_pred ccceEEEEEcCCCCCceEEEEEEEecCC-CCCCEEEEEcCCCChHHH-hHHhhhcCCeEEcCCCceeeccccccc-ccce
Q 038976 10 LGHHAGYYKLPHSHDAKMFYFFFESRNS-KKDPVVIWLTGGPGCSSE-LAVFYENGPFSIADNMSLVWNEHGWDK-ASNL 86 (220)
Q Consensus 10 ~~~ysGyl~v~~~~~~~lFy~~~~s~~~-~~~Pl~lwlnGGPG~SS~-~g~~~e~GP~~i~~~~~l~~n~~sW~~-~anv 86 (220)
+....++++.. .+..++|+.+..... +.+|+||++||..+.++- +-.+ ...+.+ -.+|
T Consensus 30 ~~~~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~-----------------~~~L~~~Gy~V 90 (330)
T PLN02298 30 IKGSKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQST-----------------AIFLAQMGFAC 90 (330)
T ss_pred CccccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHH-----------------HHHHHhCCCEE
Confidence 34445666653 345788766543322 467899999998533221 0000 011333 4789
Q ss_pred eEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCce
Q 038976 87 LYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIH 166 (220)
Q Consensus 87 lfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~ 166 (220)
+-+|.| |.|.|-... ....+.+..++|+..+++.. ....++...+++|+|+|+||..+-.++.+ . .
T Consensus 91 ~~~D~r-GhG~S~~~~--~~~~~~~~~~~D~~~~i~~l-~~~~~~~~~~i~l~GhSmGG~ia~~~a~~----~------p 156 (330)
T PLN02298 91 FALDLE-GHGRSEGLR--AYVPNVDLVVEDCLSFFNSV-KQREEFQGLPRFLYGESMGGAICLLIHLA----N------P 156 (330)
T ss_pred EEecCC-CCCCCCCcc--ccCCCHHHHHHHHHHHHHHH-HhcccCCCCCEEEEEecchhHHHHHHHhc----C------c
Confidence 999985 999985321 12234556788888888544 33333445589999999999877655532 1 1
Q ss_pred eeeeEEEEeccCCC
Q 038976 167 INLKGFAIGNGLTD 180 (220)
Q Consensus 167 inLkGi~igng~~d 180 (220)
-.++++++.+++.+
T Consensus 157 ~~v~~lvl~~~~~~ 170 (330)
T PLN02298 157 EGFDGAVLVAPMCK 170 (330)
T ss_pred ccceeEEEeccccc
Confidence 24889998888764
No 19
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.26 E-value=1.7e-05 Score=73.23 Aligned_cols=126 Identities=17% Similarity=0.169 Sum_probs=82.5
Q ss_pred CceEEEEEEEecCCCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccc-cccceeEEeCCCCcccccccC
Q 038976 24 DAKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWD-KASNLLYVDQPTGTGFSYTSD 102 (220)
Q Consensus 24 ~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~-~~anvlfiDqP~G~GfSy~~~ 102 (220)
+..+|++.+.....+.+|+||++||.++.+..+-.+.+ .+. +-.+++-+|. +|.|.|-...
T Consensus 120 ~~~l~~~~~~p~~~~~~~~Vl~lHG~~~~~~~~~~~a~-----------------~L~~~Gy~V~~~D~-rGhG~S~~~~ 181 (395)
T PLN02652 120 RNALFCRSWAPAAGEMRGILIIIHGLNEHSGRYLHFAK-----------------QLTSCGFGVYAMDW-IGHGGSDGLH 181 (395)
T ss_pred CCEEEEEEecCCCCCCceEEEEECCchHHHHHHHHHHH-----------------HHHHCCCEEEEeCC-CCCCCCCCCC
Confidence 45788887776544467899999998776554322221 121 2458999998 4999885432
Q ss_pred CCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCC
Q 038976 103 KRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTD 180 (220)
Q Consensus 103 ~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d 180 (220)
.+..+.+..++|+..+++..-.++| ..+++|+|||+||..+..++.+ .+ ..-.++|+++.+|+++
T Consensus 182 --~~~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~~----p~----~~~~v~glVL~sP~l~ 246 (395)
T PLN02652 182 --GYVPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAASY----PS----IEDKLEGIVLTSPALR 246 (395)
T ss_pred --CCCcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHhc----cC----cccccceEEEECcccc
Confidence 2223455667888887765554544 3479999999999877654421 11 1135889999999864
No 20
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.23 E-value=6e-06 Score=72.70 Aligned_cols=124 Identities=18% Similarity=0.302 Sum_probs=72.9
Q ss_pred EEEEEcCCCCCceEEEEEEEecCCCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeeccccc-ccccceeEEeCC
Q 038976 14 AGYYKLPHSHDAKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGW-DKASNLLYVDQP 92 (220)
Q Consensus 14 sGyl~v~~~~~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW-~~~anvlfiDqP 92 (220)
.+|+.+.+ +.+++|.-. . +++.|.||++||+||.++..... . .| .+..+|+-+|.|
T Consensus 6 ~~~~~~~~--~~~l~y~~~--g-~~~~~~lvllHG~~~~~~~~~~~----~--------------~~~~~~~~vi~~D~~ 62 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS--G-NPDGKPVVFLHGGPGSGTDPGCR----R--------------FFDPETYRIVLFDQR 62 (306)
T ss_pred CCeEEcCC--CcEEEEEEC--c-CCCCCEEEEECCCCCCCCCHHHH----h--------------ccCccCCEEEEECCC
Confidence 46777754 346766432 2 33445678999999875431110 0 11 135789999985
Q ss_pred CCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEE
Q 038976 93 TGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGF 172 (220)
Q Consensus 93 ~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi 172 (220)
|.|.|..... ....+.++.++|+.. +.+. +..++++++|+||||..+-.+|.+-. -.++++
T Consensus 63 -G~G~S~~~~~-~~~~~~~~~~~dl~~----l~~~---l~~~~~~lvG~S~GG~ia~~~a~~~p----------~~v~~l 123 (306)
T TIGR01249 63 -GCGKSTPHAC-LEENTTWDLVADIEK----LREK---LGIKNWLVFGGSWGSTLALAYAQTHP----------EVVTGL 123 (306)
T ss_pred -CCCCCCCCCC-cccCCHHHHHHHHHH----HHHH---cCCCCEEEEEECHHHHHHHHHHHHCh----------Hhhhhh
Confidence 9999963321 111223344455443 3333 23457999999999988877776532 235666
Q ss_pred EEeccCC
Q 038976 173 AIGNGLT 179 (220)
Q Consensus 173 ~igng~~ 179 (220)
++.+..+
T Consensus 124 vl~~~~~ 130 (306)
T TIGR01249 124 VLRGIFL 130 (306)
T ss_pred eeecccc
Confidence 6666544
No 21
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.20 E-value=1.1e-05 Score=70.03 Aligned_cols=104 Identities=18% Similarity=0.204 Sum_probs=69.9
Q ss_pred CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHHH
Q 038976 39 KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLY 118 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~ 118 (220)
+.|.||++||.|+.+..+..+.+ .+.+...++-+|.| |.|.|..... ..+....++|+.
T Consensus 26 ~g~~vvllHG~~~~~~~w~~~~~-----------------~L~~~~~via~D~~-G~G~S~~~~~---~~~~~~~a~dl~ 84 (295)
T PRK03592 26 EGDPIVFLHGNPTSSYLWRNIIP-----------------HLAGLGRCLAPDLI-GMGASDKPDI---DYTFADHARYLD 84 (295)
T ss_pred CCCEEEEECCCCCCHHHHHHHHH-----------------HHhhCCEEEEEcCC-CCCCCCCCCC---CCCHHHHHHHHH
Confidence 45789999999988877643321 12344589999985 9999954321 123444556655
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCC
Q 038976 119 DFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTD 180 (220)
Q Consensus 119 ~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d 180 (220)
.++ +. +..++++|+|+|+||.++-.+|.+-. -.++++++.|+...
T Consensus 85 ~ll----~~---l~~~~~~lvGhS~Gg~ia~~~a~~~p----------~~v~~lil~~~~~~ 129 (295)
T PRK03592 85 AWF----DA---LGLDDVVLVGHDWGSALGFDWAARHP----------DRVRGIAFMEAIVR 129 (295)
T ss_pred HHH----HH---hCCCCeEEEEECHHHHHHHHHHHhCh----------hheeEEEEECCCCC
Confidence 555 43 33468999999999988877776532 24788898887543
No 22
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.19 E-value=1e-05 Score=67.65 Aligned_cols=100 Identities=23% Similarity=0.262 Sum_probs=67.1
Q ss_pred CCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHHHH
Q 038976 40 DPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYD 119 (220)
Q Consensus 40 ~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~ 119 (220)
.|.||++||.++.+..+-.+.+ .. +..+++-+|.| |.|.|.... ..+.+..++|+.+
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~-----------------~l-~~~~vi~~D~~-G~G~S~~~~----~~~~~~~~~~l~~ 58 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGE-----------------AL-PDYPRLYIDLP-GHGGSAAIS----VDGFADVSRLLSQ 58 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHH-----------------Hc-CCCCEEEecCC-CCCCCCCcc----ccCHHHHHHHHHH
Confidence 5889999999998876543331 11 24789999975 999985321 1244455566555
Q ss_pred HHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccC
Q 038976 120 FLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGL 178 (220)
Q Consensus 120 fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 178 (220)
++ ++ +...+++++|+|+||..+-.+|.+... -.++++++.++.
T Consensus 59 ~l----~~---~~~~~~~lvG~S~Gg~va~~~a~~~~~---------~~v~~lvl~~~~ 101 (242)
T PRK11126 59 TL----QS---YNILPYWLVGYSLGGRIAMYYACQGLA---------GGLCGLIVEGGN 101 (242)
T ss_pred HH----HH---cCCCCeEEEEECHHHHHHHHHHHhCCc---------ccccEEEEeCCC
Confidence 55 43 344689999999999888888776321 127777877654
No 23
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.18 E-value=1.7e-05 Score=68.42 Aligned_cols=115 Identities=17% Similarity=0.130 Sum_probs=72.2
Q ss_pred ceEEEEEEEecCCCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCC
Q 038976 25 AKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKR 104 (220)
Q Consensus 25 ~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~ 104 (220)
..+.|+..+. .+..|.||++||-++.+..+..+.+ ...+..+++.+|.| |.|.|-... .
T Consensus 12 ~~~~~~~~~~--~~~~~plvllHG~~~~~~~w~~~~~-----------------~L~~~~~vi~~Dl~-G~G~S~~~~-~ 70 (276)
T TIGR02240 12 QSIRTAVRPG--KEGLTPLLIFNGIGANLELVFPFIE-----------------ALDPDLEVIAFDVP-GVGGSSTPR-H 70 (276)
T ss_pred cEEEEEEecC--CCCCCcEEEEeCCCcchHHHHHHHH-----------------HhccCceEEEECCC-CCCCCCCCC-C
Confidence 3566766442 2344678899997666665533321 12245799999985 999994321 1
Q ss_pred cccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 105 DIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 105 ~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
..+.+..++|+.+++ +. +..++++|+|+|+||..+-.+|.+-. -.++++++.|+..
T Consensus 71 --~~~~~~~~~~~~~~i----~~---l~~~~~~LvG~S~GG~va~~~a~~~p----------~~v~~lvl~~~~~ 126 (276)
T TIGR02240 71 --PYRFPGLAKLAARML----DY---LDYGQVNAIGVSWGGALAQQFAHDYP----------ERCKKLILAATAA 126 (276)
T ss_pred --cCcHHHHHHHHHHHH----HH---hCcCceEEEEECHHHHHHHHHHHHCH----------HHhhheEEeccCC
Confidence 123444555655555 33 23357999999999998877776422 2477888877654
No 24
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.15 E-value=1.8e-05 Score=64.58 Aligned_cols=88 Identities=17% Similarity=0.209 Sum_probs=57.6
Q ss_pred CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHHH
Q 038976 39 KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLY 118 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~ 118 (220)
.+|++|+++|-++.+..+..+.+ ...+..+++.+|.| |.|.|-... ...+.+..++|+.
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~-----------------~l~~~~~v~~~d~~-G~G~s~~~~---~~~~~~~~~~~~~ 70 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLP-----------------ALTPDFRVLRYDKR-GHGLSDAPE---GPYSIEDLADDVL 70 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHH-----------------HhhcccEEEEecCC-CCCCCCCCC---CCCCHHHHHHHHH
Confidence 67999999986555544433321 11234689999985 999884321 1224455566666
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHH
Q 038976 119 DFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 119 ~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~ 154 (220)
++++.+ ...+++|+|+|+||..+-.+|.+
T Consensus 71 ~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 71 ALLDHL-------GIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred HHHHHh-------CCCceEEEEeCchHHHHHHHHHH
Confidence 555332 33579999999999988877765
No 25
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.15 E-value=1.4e-05 Score=73.78 Aligned_cols=108 Identities=13% Similarity=0.172 Sum_probs=68.0
Q ss_pred CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHHH
Q 038976 39 KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLY 118 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~ 118 (220)
+.|.||++||.++.+..+.... ..+.+..+|+-+|. +|.|.|-... .. ..+.+...+.+.
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~-----------------~~L~~~~~vi~~D~-rG~G~S~~~~-~~-~~~~~~~~~~~~ 163 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNF-----------------DALASRFRVIAIDQ-LGWGGSSRPD-FT-CKSTEETEAWFI 163 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHH-----------------HHHHhCCEEEEECC-CCCCCCCCCC-cc-cccHHHHHHHHH
Confidence 6799999999977665442111 11334578999998 4999884321 11 112233334455
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 119 DFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 119 ~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
+.+.+|.+. ....+++|+|||+||..+-.+|.+-. -.++++++.++..
T Consensus 164 ~~i~~~~~~---l~~~~~~lvGhS~GG~la~~~a~~~p----------~~v~~lvl~~p~~ 211 (402)
T PLN02894 164 DSFEEWRKA---KNLSNFILLGHSFGGYVAAKYALKHP----------EHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHH---cCCCCeEEEEECHHHHHHHHHHHhCc----------hhhcEEEEECCcc
Confidence 556666654 23457999999999987776665421 3477888877653
No 26
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.13 E-value=1.6e-05 Score=64.67 Aligned_cols=105 Identities=23% Similarity=0.400 Sum_probs=65.5
Q ss_pred CCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHHHH
Q 038976 40 DPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYD 119 (220)
Q Consensus 40 ~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~ 119 (220)
+|+||++||.+|.+..+..+.+ ...+-.+++-+|.| |.|.|...... ...+.++.++++
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~-----------------~L~~~~~v~~~d~~-g~G~s~~~~~~-~~~~~~~~~~~~-- 59 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIE-----------------LLGPHFRCLAIDLP-GHGSSQSPDEI-ERYDFEEAAQDI-- 59 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHH-----------------HhcccCeEEEEcCC-CCCCCCCCCcc-ChhhHHHHHHHH--
Confidence 4889999999887765433221 11134689999975 99988432110 112333334442
Q ss_pred HHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 120 FLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 120 fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
+..+.++ +..++++|+|||+||..+..+|.+.. -.++++++.++..
T Consensus 60 -~~~~~~~---~~~~~~~l~G~S~Gg~ia~~~a~~~~----------~~v~~lil~~~~~ 105 (251)
T TIGR03695 60 -LATLLDQ---LGIEPFFLVGYSMGGRIALYYALQYP----------ERVQGLILESGSP 105 (251)
T ss_pred -HHHHHHH---cCCCeEEEEEeccHHHHHHHHHHhCc----------hheeeeEEecCCC
Confidence 3333333 34568999999999998888887632 2477888777643
No 27
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.12 E-value=6.9e-06 Score=75.23 Aligned_cols=131 Identities=18% Similarity=0.214 Sum_probs=75.0
Q ss_pred EEEEEEEec--CCC-CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCC
Q 038976 27 MFYFFFESR--NSK-KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDK 103 (220)
Q Consensus 27 lFy~~~~s~--~~~-~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~ 103 (220)
-.||++++. .+| ++|++|++||| |.+.+.=|+.+.. ..+-+...+...+|.+|-..-. |- ..+
T Consensus 106 ~s~Wlvk~P~~~~pk~DpVlIYlHGG-------GY~l~~~p~qi~~----L~~i~~~l~~~SILvLDYsLt~--~~-~~~ 171 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKSDPVLIYLHGG-------GYFLGTTPSQIEF----LLNIYKLLPEVSILVLDYSLTS--SD-EHG 171 (374)
T ss_pred ceEEEEeCCcccCCCCCcEEEEEcCC-------eeEecCCHHHHHH----HHHHHHHcCCCeEEEEeccccc--cc-cCC
Confidence 458999963 245 79999999999 2233333333211 0011111223389999963221 00 011
Q ss_pred CcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChhc
Q 038976 104 RDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGV 183 (220)
Q Consensus 104 ~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~~ 183 (220)
..+++ ...++.+..+...+. -..+++.|+|+|.||+.+-.+..++.+.++. . . =|.+++.+||+++..
T Consensus 172 ~~yPt----QL~qlv~~Y~~Lv~~---~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~-~---~-Pk~~iLISPWv~l~~ 239 (374)
T PF10340_consen 172 HKYPT----QLRQLVATYDYLVES---EGNKNIILMGDSAGGNLALSFLQYLKKPNKL-P---Y-PKSAILISPWVNLVP 239 (374)
T ss_pred CcCch----HHHHHHHHHHHHHhc---cCCCeEEEEecCccHHHHHHHHHHHhhcCCC-C---C-CceeEEECCCcCCcC
Confidence 11211 122333333333322 3346899999999999999999998765431 1 1 268899999999873
No 28
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.12 E-value=2.4e-05 Score=68.43 Aligned_cols=125 Identities=14% Similarity=0.238 Sum_probs=73.6
Q ss_pred ccceEEEEEcCCCCCceEEEEEEEecCCCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEE
Q 038976 10 LGHHAGYYKLPHSHDAKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYV 89 (220)
Q Consensus 10 ~~~ysGyl~v~~~~~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfi 89 (220)
....+.+++++. ..++|. ... ..|.||++||.|..+..+-.+.+ .+.+..+++-+
T Consensus 12 ~~~~~~~~~~~~---~~i~y~--~~G---~~~~iv~lHG~~~~~~~~~~~~~-----------------~l~~~~~vi~~ 66 (286)
T PRK03204 12 YPFESRWFDSSR---GRIHYI--DEG---TGPPILLCHGNPTWSFLYRDIIV-----------------ALRDRFRCVAP 66 (286)
T ss_pred ccccceEEEcCC---cEEEEE--ECC---CCCEEEEECCCCccHHHHHHHHH-----------------HHhCCcEEEEE
Confidence 334566787753 244433 221 35789999999865555432221 12345789999
Q ss_pred eCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeee
Q 038976 90 DQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINL 169 (220)
Q Consensus 90 DqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inL 169 (220)
|.| |.|.|-.... ...+.+..+++ +..++++ +...+++|+|||+||..+-.+|.+- .-++
T Consensus 67 D~~-G~G~S~~~~~--~~~~~~~~~~~----~~~~~~~---~~~~~~~lvG~S~Gg~va~~~a~~~----------p~~v 126 (286)
T PRK03204 67 DYL-GFGLSERPSG--FGYQIDEHARV----IGEFVDH---LGLDRYLSMGQDWGGPISMAVAVER----------ADRV 126 (286)
T ss_pred CCC-CCCCCCCCCc--cccCHHHHHHH----HHHHHHH---hCCCCEEEEEECccHHHHHHHHHhC----------hhhe
Confidence 985 9998843211 11223334444 4444443 3345799999999998655555321 1358
Q ss_pred eEEEEeccCC
Q 038976 170 KGFAIGNGLT 179 (220)
Q Consensus 170 kGi~igng~~ 179 (220)
+++++.++..
T Consensus 127 ~~lvl~~~~~ 136 (286)
T PRK03204 127 RGVVLGNTWF 136 (286)
T ss_pred eEEEEECccc
Confidence 8888887654
No 29
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.04 E-value=4.7e-05 Score=68.95 Aligned_cols=132 Identities=14% Similarity=0.110 Sum_probs=77.6
Q ss_pred CccceEEEEEcCCCCCceEEEEEEEec-CCCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeeccccccccccee
Q 038976 9 DLGHHAGYYKLPHSHDAKMFYFFFESR-NSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLL 87 (220)
Q Consensus 9 ~~~~ysGyl~v~~~~~~~lFy~~~~s~-~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvl 87 (220)
..+.-..++.+++. .+++|.-.... ..++.|.||+|||-++.+..+..+.+ ...+..+++
T Consensus 58 ~~~~~~~~~~~~g~--~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~-----------------~L~~~~~vi 118 (360)
T PLN02679 58 EIYERCKKWKWKGE--YSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIG-----------------VLAKNYTVY 118 (360)
T ss_pred HhhccCceEEECCc--eeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHH-----------------HHhcCCEEE
Confidence 34444556666432 15555433221 11245888999999887776543321 122456899
Q ss_pred EEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCcee
Q 038976 88 YVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHI 167 (220)
Q Consensus 88 fiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~i 167 (220)
-+|.| |.|.|-.... ...+.+..++++.++|++ +...+++|+|+|+||..+-.+|..- . .-
T Consensus 119 a~Dl~-G~G~S~~~~~--~~~~~~~~a~~l~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~--~-------P~ 179 (360)
T PLN02679 119 AIDLL-GFGASDKPPG--FSYTMETWAELILDFLEE-------VVQKPTVLIGNSVGSLACVIAASES--T-------RD 179 (360)
T ss_pred EECCC-CCCCCCCCCC--ccccHHHHHHHHHHHHHH-------hcCCCeEEEEECHHHHHHHHHHHhc--C-------hh
Confidence 99986 9999853221 122445566666666542 2345899999999997654444321 1 12
Q ss_pred eeeEEEEeccC
Q 038976 168 NLKGFAIGNGL 178 (220)
Q Consensus 168 nLkGi~igng~ 178 (220)
.++++++.|+.
T Consensus 180 rV~~LVLi~~~ 190 (360)
T PLN02679 180 LVRGLVLLNCA 190 (360)
T ss_pred hcCEEEEECCc
Confidence 47888877754
No 30
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=98.01 E-value=0.00011 Score=64.56 Aligned_cols=128 Identities=13% Similarity=0.057 Sum_probs=80.7
Q ss_pred CceEEEEEEEecCCCCCCEEEEEcCCCCh---HH-HhHHhhhcCCeEEcCCCceeecccccc-cccceeEEeCCCCcccc
Q 038976 24 DAKMFYFFFESRNSKKDPVVIWLTGGPGC---SS-ELAVFYENGPFSIADNMSLVWNEHGWD-KASNLLYVDQPTGTGFS 98 (220)
Q Consensus 24 ~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~---SS-~~g~~~e~GP~~i~~~~~l~~n~~sW~-~~anvlfiDqP~G~GfS 98 (220)
..++|.|+++....+.+|+||++||-.+- +. ++..+. ..+. .-.+++-+|.| |.|.|
T Consensus 9 ~g~~~~~~~~p~~~~~~~~VlllHG~g~~~~~~~~~~~~la-----------------~~La~~Gy~Vl~~Dl~-G~G~S 70 (266)
T TIGR03101 9 HGFRFCLYHPPVAVGPRGVVIYLPPFAEEMNKSRRMVALQA-----------------RAFAAGGFGVLQIDLY-GCGDS 70 (266)
T ss_pred CCcEEEEEecCCCCCCceEEEEECCCcccccchhHHHHHHH-----------------HHHHHCCCEEEEECCC-CCCCC
Confidence 45688888877544357999999985331 11 111111 0122 23689999985 99988
Q ss_pred cccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccC
Q 038976 99 YTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGL 178 (220)
Q Consensus 99 y~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 178 (220)
-..... .+.....+|+..++ +|+++. ...+++|+|+|+||..+..+|.+.. -.++++++-+|.
T Consensus 71 ~g~~~~---~~~~~~~~Dv~~ai-~~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~p----------~~v~~lVL~~P~ 133 (266)
T TIGR03101 71 AGDFAA---ARWDVWKEDVAAAY-RWLIEQ---GHPPVTLWGLRLGALLALDAANPLA----------AKCNRLVLWQPV 133 (266)
T ss_pred CCcccc---CCHHHHHHHHHHHH-HHHHhc---CCCCEEEEEECHHHHHHHHHHHhCc----------cccceEEEeccc
Confidence 543211 23344567766554 455542 2458999999999999887775421 347888999998
Q ss_pred CChhcccc
Q 038976 179 TDPGVQYK 186 (220)
Q Consensus 179 ~dp~~q~~ 186 (220)
++......
T Consensus 134 ~~g~~~l~ 141 (266)
T TIGR03101 134 VSGKQQLQ 141 (266)
T ss_pred cchHHHHH
Confidence 87654443
No 31
>PRK10349 carboxylesterase BioH; Provisional
Probab=97.99 E-value=2.4e-05 Score=66.34 Aligned_cols=94 Identities=16% Similarity=0.072 Sum_probs=61.7
Q ss_pred CEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHHHHH
Q 038976 41 PVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDF 120 (220)
Q Consensus 41 Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~f 120 (220)
|.||++||.++++..+-.+.+ .+.+..+++.+|.| |.|.|-... . .+.++.++++.
T Consensus 14 ~~ivllHG~~~~~~~w~~~~~-----------------~L~~~~~vi~~Dl~-G~G~S~~~~--~--~~~~~~~~~l~-- 69 (256)
T PRK10349 14 VHLVLLHGWGLNAEVWRCIDE-----------------ELSSHFTLHLVDLP-GFGRSRGFG--A--LSLADMAEAVL-- 69 (256)
T ss_pred CeEEEECCCCCChhHHHHHHH-----------------HHhcCCEEEEecCC-CCCCCCCCC--C--CCHHHHHHHHH--
Confidence 568999998887777643321 23466899999986 999985321 1 23333333332
Q ss_pred HHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEecc
Q 038976 121 LQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNG 177 (220)
Q Consensus 121 l~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 177 (220)
+ +...+++++|||+||..+..+|.+-. -.++++++.|+
T Consensus 70 --~-------~~~~~~~lvGhS~Gg~ia~~~a~~~p----------~~v~~lili~~ 107 (256)
T PRK10349 70 --Q-------QAPDKAIWLGWSLGGLVASQIALTHP----------ERVQALVTVAS 107 (256)
T ss_pred --h-------cCCCCeEEEEECHHHHHHHHHHHhCh----------HhhheEEEecC
Confidence 1 22457999999999998888775421 34677777665
No 32
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.97 E-value=9.8e-05 Score=63.07 Aligned_cols=93 Identities=20% Similarity=0.239 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCCChHHHhHHhhh-cCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHH
Q 038976 39 KDPVVIWLTGGPGCSSELAVFYE-NGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDL 117 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~SS~~g~~~e-~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~ 117 (220)
+.|.||++||.++.+..+..+.. .-+ -..+..+++-+|.| |.|.|-..... ... ....++|+
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~--------------l~~~~~~vi~~D~~-G~G~S~~~~~~-~~~-~~~~~~~l 91 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGP--------------FVDAGYRVILKDSP-GFNKSDAVVMD-EQR-GLVNARAV 91 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHH--------------HHhCCCEEEEECCC-CCCCCCCCcCc-ccc-cchhHHHH
Confidence 45779999998755443321100 000 01234789999985 99999532111 111 11234555
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHH
Q 038976 118 YDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARV 155 (220)
Q Consensus 118 ~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i 155 (220)
.+++ +. +..++++++|+|+||..+-.+|.+-
T Consensus 92 ~~~l----~~---l~~~~~~lvG~S~Gg~ia~~~a~~~ 122 (282)
T TIGR03343 92 KGLM----DA---LDIEKAHLVGNSMGGATALNFALEY 122 (282)
T ss_pred HHHH----HH---cCCCCeeEEEECchHHHHHHHHHhC
Confidence 5444 33 3456899999999999998888653
No 33
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.96 E-value=1.4e-05 Score=77.70 Aligned_cols=138 Identities=17% Similarity=0.201 Sum_probs=82.7
Q ss_pred EEcCCCCCceEEEEEEEecC-CC--CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccc-cccccceeEEeCC
Q 038976 17 YKLPHSHDAKMFYFFFESRN-SK--KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHG-WDKASNLLYVDQP 92 (220)
Q Consensus 17 l~v~~~~~~~lFy~~~~s~~-~~--~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~s-W~~~anvlfiDqP 92 (220)
+.+....+..+..|++...+ ++ +-|+|+++|||| +++.+ +. ...+... +.+-+.|++++ |
T Consensus 368 ~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~~~-------~~------~~~~~q~~~~~G~~V~~~n-~ 431 (620)
T COG1506 368 VTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQVG-------YS------FNPEIQVLASAGYAVLAPN-Y 431 (620)
T ss_pred EEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccccc-------cc------cchhhHHHhcCCeEEEEeC-C
Confidence 33333345577788887654 23 349999999999 33332 00 0111111 34456889998 5
Q ss_pred CCc-ccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeE
Q 038976 93 TGT-GFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKG 171 (220)
Q Consensus 93 ~G~-GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkG 171 (220)
+|+ ||...-.......--....+|+.++++ |+.+.|.....++.|+|.||||...-.++.+- . .++.
T Consensus 432 RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~----------~-~f~a 499 (620)
T COG1506 432 RGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKT----------P-RFKA 499 (620)
T ss_pred CCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcC----------c-hhhe
Confidence 764 443221110001112235679999998 99999999888999999999997655444321 1 3666
Q ss_pred EEEeccCCChh
Q 038976 172 FAIGNGLTDPG 182 (220)
Q Consensus 172 i~igng~~dp~ 182 (220)
.+...+.+|-.
T Consensus 500 ~~~~~~~~~~~ 510 (620)
T COG1506 500 AVAVAGGVDWL 510 (620)
T ss_pred EEeccCcchhh
Confidence 66666666544
No 34
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.94 E-value=8.7e-05 Score=68.36 Aligned_cols=106 Identities=15% Similarity=0.174 Sum_probs=67.9
Q ss_pred CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCC-cccccccchHHHH
Q 038976 39 KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKR-DIRHNENGVSNDL 117 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~-~~~~~~~~~a~d~ 117 (220)
..|.||++||.|+.+..+-.+.+ .+.+..+++-+|.| |.|+|...... ....+.+..++|+
T Consensus 126 ~~~~ivllHG~~~~~~~w~~~~~-----------------~L~~~~~Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~~l 187 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYSYRKVLP-----------------VLSKNYHAIAFDWL-GFGFSDKPQPGYGFNYTLDEYVSSL 187 (383)
T ss_pred CCCeEEEECCCCCCHHHHHHHHH-----------------HHhcCCEEEEECCC-CCCCCCCCcccccccCCHHHHHHHH
Confidence 57899999999987766543321 12345789999986 99999643221 1112445555666
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 118 YDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 118 ~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
..++++ +..++++|+|+|+||..+-.+|.+- .-.++++++.|+..
T Consensus 188 ~~~i~~-------l~~~~~~LvG~s~GG~ia~~~a~~~----------P~~v~~lILi~~~~ 232 (383)
T PLN03084 188 ESLIDE-------LKSDKVSLVVQGYFSPPVVKYASAH----------PDKIKKLILLNPPL 232 (383)
T ss_pred HHHHHH-------hCCCCceEEEECHHHHHHHHHHHhC----------hHhhcEEEEECCCC
Confidence 555533 2335799999999986555554431 13488888888764
No 35
>PRK10749 lysophospholipase L2; Provisional
Probab=97.93 E-value=0.00012 Score=65.33 Aligned_cols=124 Identities=19% Similarity=0.160 Sum_probs=77.0
Q ss_pred CceEEEEEEEecCCCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeeccccc-ccccceeEEeCCCCcccccccC
Q 038976 24 DAKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGW-DKASNLLYVDQPTGTGFSYTSD 102 (220)
Q Consensus 24 ~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW-~~~anvlfiDqP~G~GfSy~~~ 102 (220)
+..++|+.+... ..+|+||.+||-.+.+..+..+. + .+ .+-.+++-+|.| |.|.|-...
T Consensus 40 g~~l~~~~~~~~--~~~~~vll~HG~~~~~~~y~~~~---~--------------~l~~~g~~v~~~D~~-G~G~S~~~~ 99 (330)
T PRK10749 40 DIPIRFVRFRAP--HHDRVVVICPGRIESYVKYAELA---Y--------------DLFHLGYDVLIIDHR-GQGRSGRLL 99 (330)
T ss_pred CCEEEEEEccCC--CCCcEEEEECCccchHHHHHHHH---H--------------HHHHCCCeEEEEcCC-CCCCCCCCC
Confidence 346777776542 35678999999865443332221 0 01 123689999984 999995322
Q ss_pred CC---cccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 103 KR---DIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 103 ~~---~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
.. ....+.+..++|+..+++..... +...+++++|+|+||..+-.+|.+-. -.++++++.+|..
T Consensus 100 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~~~~~l~GhSmGG~ia~~~a~~~p----------~~v~~lvl~~p~~ 166 (330)
T PRK10749 100 DDPHRGHVERFNDYVDDLAAFWQQEIQP---GPYRKRYALAHSMGGAILTLFLQRHP----------GVFDAIALCAPMF 166 (330)
T ss_pred CCCCcCccccHHHHHHHHHHHHHHHHhc---CCCCCeEEEEEcHHHHHHHHHHHhCC----------CCcceEEEECchh
Confidence 11 11124455667777777655443 34568999999999987766664311 2478889888875
Q ss_pred C
Q 038976 180 D 180 (220)
Q Consensus 180 d 180 (220)
.
T Consensus 167 ~ 167 (330)
T PRK10749 167 G 167 (330)
T ss_pred c
Confidence 3
No 36
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.90 E-value=0.00018 Score=66.88 Aligned_cols=128 Identities=16% Similarity=0.181 Sum_probs=76.2
Q ss_pred EEcCCCCCceEEEEEEEecCCCCCCEEEEEcCCCChH--HHhHHhhhcCCeEEcCCCceeeccccccc-ccceeEEeCCC
Q 038976 17 YKLPHSHDAKMFYFFFESRNSKKDPVVIWLTGGPGCS--SELAVFYENGPFSIADNMSLVWNEHGWDK-ASNLLYVDQPT 93 (220)
Q Consensus 17 l~v~~~~~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~S--S~~g~~~e~GP~~i~~~~~l~~n~~sW~~-~anvlfiDqP~ 93 (220)
|.+....+..+--+++....+...|+||. +||.+.. ..+..+.. .+.+ =.++|-+|.|
T Consensus 171 v~i~~~~g~~l~g~l~~P~~~~~~P~Vli-~gG~~~~~~~~~~~~~~-----------------~La~~Gy~vl~~D~p- 231 (414)
T PRK05077 171 LEFPIPGGGPITGFLHLPKGDGPFPTVLV-CGGLDSLQTDYYRLFRD-----------------YLAPRGIAMLTIDMP- 231 (414)
T ss_pred EEEEcCCCcEEEEEEEECCCCCCccEEEE-eCCcccchhhhHHHHHH-----------------HHHhCCCEEEEECCC-
Confidence 44433223245555554433336788875 5666652 22221110 1122 2679999997
Q ss_pred CcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEE
Q 038976 94 GTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFA 173 (220)
Q Consensus 94 G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~ 173 (220)
|.|.|.... ...+ ...+...+.+|+...|.....++.|+|+|+||.+++.+|..-. -.+++++
T Consensus 232 G~G~s~~~~---~~~d----~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p----------~ri~a~V 294 (414)
T PRK05077 232 SVGFSSKWK---LTQD----SSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEP----------PRLKAVA 294 (414)
T ss_pred CCCCCCCCC---cccc----HHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCC----------cCceEEE
Confidence 999984321 1111 1122234556777777777778999999999999998875411 2478888
Q ss_pred EeccCCC
Q 038976 174 IGNGLTD 180 (220)
Q Consensus 174 igng~~d 180 (220)
+.+|.++
T Consensus 295 ~~~~~~~ 301 (414)
T PRK05077 295 CLGPVVH 301 (414)
T ss_pred EECCccc
Confidence 8887765
No 37
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.88 E-value=5.1e-05 Score=61.84 Aligned_cols=96 Identities=16% Similarity=0.069 Sum_probs=58.7
Q ss_pred CCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHHHH
Q 038976 40 DPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYD 119 (220)
Q Consensus 40 ~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~ 119 (220)
.|.||++||.++.+..+-.+.+ ...+..+++.+|.| |.|.|.... ..+.+..++++.+
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~-----------------~l~~~~~vi~~d~~-G~G~s~~~~----~~~~~~~~~~~~~ 61 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDE-----------------ELSAHFTLHLVDLP-GHGRSRGFG----PLSLADAAEAIAA 61 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHH-----------------hhccCeEEEEecCC-cCccCCCCC----CcCHHHHHHHHHH
Confidence 3789999998766665432221 11234789999985 999874321 1223333333322
Q ss_pred HHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccC
Q 038976 120 FLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGL 178 (220)
Q Consensus 120 fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 178 (220)
. ...+++++|+|+||..+..+|.+-. -.++++++.++.
T Consensus 62 ----~-------~~~~~~lvG~S~Gg~~a~~~a~~~p----------~~v~~~il~~~~ 99 (245)
T TIGR01738 62 ----Q-------APDPAIWLGWSLGGLVALHIAATHP----------DRVRALVTVASS 99 (245)
T ss_pred ----h-------CCCCeEEEEEcHHHHHHHHHHHHCH----------HhhheeeEecCC
Confidence 1 1258999999999998877775432 135677766553
No 38
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.79 E-value=0.00098 Score=58.06 Aligned_cols=55 Identities=22% Similarity=0.166 Sum_probs=35.7
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 118 YDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 118 ~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
.+.|..++++.-....++++|+|+|+||..+-.+|.+-. -.+++++..+|+.++.
T Consensus 122 ~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p----------~~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 122 VQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNP----------DRFKSVSAFAPIVAPS 176 (275)
T ss_pred HHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCc----------ccceEEEEECCccCcc
Confidence 334444444421244568999999999987777765422 1367888888887654
No 39
>PLN02965 Probable pheophorbidase
Probab=97.78 E-value=9.8e-05 Score=62.95 Aligned_cols=99 Identities=13% Similarity=0.180 Sum_probs=62.0
Q ss_pred EEEEcCCCChHHHhHHhhhcCCeEEcCCCceeeccccc-ccccceeEEeCCCCcccccccCCCcccccccchHHHHHHHH
Q 038976 43 VIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGW-DKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFL 121 (220)
Q Consensus 43 ~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW-~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl 121 (220)
||++||.++.+..+-...+ .+ .+...++-+|.| |.|.|-..... ..+.+..++|+.+++
T Consensus 6 vvllHG~~~~~~~w~~~~~-----------------~L~~~~~~via~Dl~-G~G~S~~~~~~--~~~~~~~a~dl~~~l 65 (255)
T PLN02965 6 FVFVHGASHGAWCWYKLAT-----------------LLDAAGFKSTCVDLT-GAGISLTDSNT--VSSSDQYNRPLFALL 65 (255)
T ss_pred EEEECCCCCCcCcHHHHHH-----------------HHhhCCceEEEecCC-cCCCCCCCccc--cCCHHHHHHHHHHHH
Confidence 7888998765544422211 12 223679999985 99999432211 234455666666655
Q ss_pred HHHHHHCCCCCC-CCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccC
Q 038976 122 QAFFEEHPKLAE-NDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGL 178 (220)
Q Consensus 122 ~~f~~~~p~~~~-~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 178 (220)
.. +.. ++++++|||+||..+..+|.+..+ .++++++.|+.
T Consensus 66 ----~~---l~~~~~~~lvGhSmGG~ia~~~a~~~p~----------~v~~lvl~~~~ 106 (255)
T PLN02965 66 ----SD---LPPDHKVILVGHSIGGGSVTEALCKFTD----------KISMAIYVAAA 106 (255)
T ss_pred ----Hh---cCCCCCEEEEecCcchHHHHHHHHhCch----------heeEEEEEccc
Confidence 33 222 589999999999988888865321 35677766653
No 40
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.76 E-value=0.00018 Score=65.27 Aligned_cols=132 Identities=14% Similarity=0.273 Sum_probs=83.2
Q ss_pred ceEEEEEcCCCCCceEEEEEEEecC-CCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEe
Q 038976 12 HHAGYYKLPHSHDAKMFYFFFESRN-SKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVD 90 (220)
Q Consensus 12 ~ysGyl~v~~~~~~~lFy~~~~s~~-~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiD 90 (220)
.-+-|+.+... ... |.++-.+ +.+++-++++||= |++++ +|. .|=.+..+..||-.||
T Consensus 65 ~~~~~v~i~~~--~~i--w~~~~~~~~~~~~plVliHGy-GAg~g--~f~--------------~Nf~~La~~~~vyaiD 123 (365)
T KOG4409|consen 65 YSKKYVRIPNG--IEI--WTITVSNESANKTPLVLIHGY-GAGLG--LFF--------------RNFDDLAKIRNVYAID 123 (365)
T ss_pred cceeeeecCCC--cee--EEEeecccccCCCcEEEEecc-chhHH--HHH--------------HhhhhhhhcCceEEec
Confidence 34556667532 222 3444333 3466666678983 44432 221 1333456688999999
Q ss_pred CCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeee
Q 038976 91 QPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLK 170 (220)
Q Consensus 91 qP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLk 170 (220)
.| |-|+|-...- ..+.+..-..+.+-+++|..+. +-.+++|+|||+||......|.+-.++ ++
T Consensus 124 ll-G~G~SSRP~F---~~d~~~~e~~fvesiE~WR~~~---~L~KmilvGHSfGGYLaa~YAlKyPer----------V~ 186 (365)
T KOG4409|consen 124 LL-GFGRSSRPKF---SIDPTTAEKEFVESIEQWRKKM---GLEKMILVGHSFGGYLAAKYALKYPER----------VE 186 (365)
T ss_pred cc-CCCCCCCCCC---CCCcccchHHHHHHHHHHHHHc---CCcceeEeeccchHHHHHHHHHhChHh----------hc
Confidence 86 9999965432 2233334457888899998863 345899999999999887777665543 56
Q ss_pred EEEEeccCCCh
Q 038976 171 GFAIGNGLTDP 181 (220)
Q Consensus 171 Gi~igng~~dp 181 (220)
-++|.+||--|
T Consensus 187 kLiLvsP~Gf~ 197 (365)
T KOG4409|consen 187 KLILVSPWGFP 197 (365)
T ss_pred eEEEecccccc
Confidence 66788877543
No 41
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.75 E-value=0.00023 Score=63.45 Aligned_cols=103 Identities=16% Similarity=0.183 Sum_probs=65.8
Q ss_pred CCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHH
Q 038976 38 KKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDL 117 (220)
Q Consensus 38 ~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~ 117 (220)
++.|.+|++||.+|.+..+..+.+ ...+..+++-+|.| |.|.|-.... ..+.+..++++
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~-----------------~l~~~~~v~~~d~~-g~G~s~~~~~---~~~~~~~~~~~ 187 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHA-----------------ALAAGRPVIALDLP-GHGASSKAVG---AGSLDELAAAV 187 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHH-----------------HHhcCCEEEEEcCC-CCCCCCCCCC---CCCHHHHHHHH
Confidence 356889999999887776544332 01223689999986 9998842211 12344444454
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccC
Q 038976 118 YDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGL 178 (220)
Q Consensus 118 ~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 178 (220)
.. +++. +..++++|+|+|+||..+..+|.+-. -+++++++.++.
T Consensus 188 ~~----~~~~---~~~~~~~lvG~S~Gg~~a~~~a~~~~----------~~v~~lv~~~~~ 231 (371)
T PRK14875 188 LA----FLDA---LGIERAHLVGHSMGGAVALRLAARAP----------QRVASLTLIAPA 231 (371)
T ss_pred HH----HHHh---cCCccEEEEeechHHHHHHHHHHhCc----------hheeEEEEECcC
Confidence 44 4443 34457999999999999888776521 236677766554
No 42
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=97.75 E-value=0.0005 Score=65.24 Aligned_cols=129 Identities=14% Similarity=0.132 Sum_probs=76.9
Q ss_pred EEEEEcCCCCCceEEEEEEEecCCCCCCEEEEEcCCCChHHHhHH-hhhcCCeEEcCCCceeecccccccccceeEEeCC
Q 038976 14 AGYYKLPHSHDAKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAV-FYENGPFSIADNMSLVWNEHGWDKASNLLYVDQP 92 (220)
Q Consensus 14 sGyl~v~~~~~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~-~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP 92 (220)
.-|++.++ ..+|++.....+.+..|.||++||.++.+..+.. +.. . +. ..+.+...++-+|.|
T Consensus 178 ~~~~~~~~---~~l~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~---~-------L~---~~~~~~yrVia~Dl~ 241 (481)
T PLN03087 178 TSWLSSSN---ESLFVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFP---N-------FS---DAAKSTYRLFAVDLL 241 (481)
T ss_pred eeeEeeCC---eEEEEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHH---H-------HH---HHhhCCCEEEEECCC
Confidence 35555533 4677776655433446789999999988776532 100 0 00 013346789999985
Q ss_pred CCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEE
Q 038976 93 TGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGF 172 (220)
Q Consensus 93 ~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi 172 (220)
|.|.|-..... ..+.+..++++. +.+++. +...+++|+|+|+||..+-.+|.+-. -.++++
T Consensus 242 -G~G~S~~p~~~--~ytl~~~a~~l~---~~ll~~---lg~~k~~LVGhSmGG~iAl~~A~~~P----------e~V~~L 302 (481)
T PLN03087 242 -GFGRSPKPADS--LYTLREHLEMIE---RSVLER---YKVKSFHIVAHSLGCILALALAVKHP----------GAVKSL 302 (481)
T ss_pred -CCCCCcCCCCC--cCCHHHHHHHHH---HHHHHH---cCCCCEEEEEECHHHHHHHHHHHhCh----------HhccEE
Confidence 99988432111 123333333332 234443 44568999999999998887776522 136777
Q ss_pred EEecc
Q 038976 173 AIGNG 177 (220)
Q Consensus 173 ~igng 177 (220)
++.++
T Consensus 303 VLi~~ 307 (481)
T PLN03087 303 TLLAP 307 (481)
T ss_pred EEECC
Confidence 77765
No 43
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.72 E-value=0.00031 Score=61.23 Aligned_cols=105 Identities=12% Similarity=0.125 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccc-cccceeEEeCCCCcccccccCCCcccccccchHHH
Q 038976 38 KKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWD-KASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSND 116 (220)
Q Consensus 38 ~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~-~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d 116 (220)
.++|.||++||..+.+..+..+.. ... +-.+++-+|.| |.|.|...... ..+.+..+++
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~-----------------~L~~~g~~vi~~dl~-g~G~s~~~~~~--~~~~~~~~~~ 75 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRC-----------------LMENSGYKVTCIDLK-SAGIDQSDADS--VTTFDEYNKP 75 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHH-----------------HHHhCCCEEEEeccc-CCCCCCCCccc--CCCHHHHHHH
Confidence 477999999998766555432221 011 23589999986 88877432211 1234444444
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccC
Q 038976 117 LYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGL 178 (220)
Q Consensus 117 ~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 178 (220)
+. ++++... ..++++|+||||||..+..++.+.. -.++++++.++.
T Consensus 76 l~----~~i~~l~--~~~~v~lvGhS~GG~v~~~~a~~~p----------~~v~~lv~~~~~ 121 (273)
T PLN02211 76 LI----DFLSSLP--ENEKVILVGHSAGGLSVTQAIHRFP----------KKICLAVYVAAT 121 (273)
T ss_pred HH----HHHHhcC--CCCCEEEEEECchHHHHHHHHHhCh----------hheeEEEEeccc
Confidence 44 4444422 2368999999999998777775432 135666666553
No 44
>PLN02578 hydrolase
Probab=97.68 E-value=0.00022 Score=64.35 Aligned_cols=101 Identities=16% Similarity=0.143 Sum_probs=64.3
Q ss_pred CCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHHHH
Q 038976 40 DPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYD 119 (220)
Q Consensus 40 ~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~ 119 (220)
.|.||.+||-++.+..+.... | .+.+..+++-+|.| |.|.|-.... ..+....++|+.+
T Consensus 86 g~~vvliHG~~~~~~~w~~~~---~--------------~l~~~~~v~~~D~~-G~G~S~~~~~---~~~~~~~a~~l~~ 144 (354)
T PLN02578 86 GLPIVLIHGFGASAFHWRYNI---P--------------ELAKKYKVYALDLL-GFGWSDKALI---EYDAMVWRDQVAD 144 (354)
T ss_pred CCeEEEECCCCCCHHHHHHHH---H--------------HHhcCCEEEEECCC-CCCCCCCccc---ccCHHHHHHHHHH
Confidence 355789998766554443221 1 12345789999986 9998843221 1234445566666
Q ss_pred HHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccC
Q 038976 120 FLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGL 178 (220)
Q Consensus 120 fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 178 (220)
|+++. ..++++|+|+|+||..+..+|.+-. -+++++++.|+.
T Consensus 145 ~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~p----------~~v~~lvLv~~~ 186 (354)
T PLN02578 145 FVKEV-------VKEPAVLVGNSLGGFTALSTAVGYP----------ELVAGVALLNSA 186 (354)
T ss_pred HHHHh-------ccCCeEEEEECHHHHHHHHHHHhCh----------HhcceEEEECCC
Confidence 66443 2458999999999998877776533 247778877653
No 45
>PRK10566 esterase; Provisional
Probab=97.68 E-value=0.0003 Score=59.39 Aligned_cols=108 Identities=16% Similarity=0.173 Sum_probs=62.6
Q ss_pred EEEEEEecC-CCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeeccccccc-ccceeEEeCCCCcccccccCCCc
Q 038976 28 FYFFFESRN-SKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDK-ASNLLYVDQPTGTGFSYTSDKRD 105 (220)
Q Consensus 28 Fy~~~~s~~-~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~-~anvlfiDqP~G~GfSy~~~~~~ 105 (220)
++.+++... ++..|+||++||.++....+..+. ..+.+ -.+++.+|.| |.|-|+......
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~-----------------~~l~~~G~~v~~~d~~-g~G~~~~~~~~~ 75 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFA-----------------VALAQAGFRVIMPDAP-MHGARFSGDEAR 75 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccchHHHHH-----------------HHHHhCCCEEEEecCC-cccccCCCcccc
Confidence 344455433 236799999999988754332211 11223 2578899975 888765322110
Q ss_pred ccc----cccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHH
Q 038976 106 IRH----NENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 106 ~~~----~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~ 154 (220)
... ......+|+..++ .++.+.+....+++.|+|+|+||..+-.++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 76 RLNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred chhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 000 0112334554444 45555444556789999999999988777654
No 46
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.67 E-value=0.00052 Score=73.67 Aligned_cols=105 Identities=20% Similarity=0.296 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCC-----Ccccccccc
Q 038976 38 KKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDK-----RDIRHNENG 112 (220)
Q Consensus 38 ~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~-----~~~~~~~~~ 112 (220)
++.|.||++||.+|.+..+..+.+ .+.+..+++.+|.| |.|.|..... .....+.+.
T Consensus 1369 ~~~~~vVllHG~~~s~~~w~~~~~-----------------~L~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~~si~~ 1430 (1655)
T PLN02980 1369 AEGSVVLFLHGFLGTGEDWIPIMK-----------------AISGSARCISIDLP-GHGGSKIQNHAKETQTEPTLSVEL 1430 (1655)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHH-----------------HHhCCCEEEEEcCC-CCCCCCCccccccccccccCCHHH
Confidence 367899999999998876533321 12234689999985 9998864321 011123344
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEecc
Q 038976 113 VSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNG 177 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 177 (220)
.++++.+++ +. +...+++|+|+|+||..+-.+|.+.. -.++++++.++
T Consensus 1431 ~a~~l~~ll----~~---l~~~~v~LvGhSmGG~iAl~~A~~~P----------~~V~~lVlis~ 1478 (1655)
T PLN02980 1431 VADLLYKLI----EH---ITPGKVTLVGYSMGARIALYMALRFS----------DKIEGAVIISG 1478 (1655)
T ss_pred HHHHHHHHH----HH---hCCCCEEEEEECHHHHHHHHHHHhCh----------HhhCEEEEECC
Confidence 455555444 32 33468999999999998888776532 23667766654
No 47
>PRK06489 hypothetical protein; Provisional
Probab=97.67 E-value=0.00039 Score=62.79 Aligned_cols=112 Identities=16% Similarity=0.146 Sum_probs=60.6
Q ss_pred CCEEEEEcCCCChHHHhH--HhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCc---c-cccccch
Q 038976 40 DPVVIWLTGGPGCSSELA--VFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRD---I-RHNENGV 113 (220)
Q Consensus 40 ~Pl~lwlnGGPG~SS~~g--~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~---~-~~~~~~~ 113 (220)
.|.||++||++|.+..+- .+.+ ..+. ....--.+..+|+.+|.| |.|.|-...... . ..+.+..
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~---~l~~------~~~~l~~~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~ 138 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAG---ELFG------PGQPLDASKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDM 138 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHH---HhcC------CCCcccccCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHH
Confidence 688999999988665431 1100 0000 000001345789999986 999985322110 0 1122333
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCE-EEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEecc
Q 038976 114 SNDLYDFLQAFFEEHPKLAENDF-YITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNG 177 (220)
Q Consensus 114 a~d~~~fl~~f~~~~p~~~~~~~-yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 177 (220)
++|+. .++.. ++.-.++ +|+|+|+||..+-.+|.+-.+ .++++++.++
T Consensus 139 a~~~~----~~l~~--~lgi~~~~~lvG~SmGG~vAl~~A~~~P~----------~V~~LVLi~s 187 (360)
T PRK06489 139 VEAQY----RLVTE--GLGVKHLRLILGTSMGGMHAWMWGEKYPD----------FMDALMPMAS 187 (360)
T ss_pred HHHHH----HHHHH--hcCCCceeEEEEECHHHHHHHHHHHhCch----------hhheeeeecc
Confidence 44433 33322 2333456 489999999887777755322 3666666554
No 48
>PRK05855 short chain dehydrogenase; Validated
Probab=97.65 E-value=0.00028 Score=66.50 Aligned_cols=101 Identities=10% Similarity=0.109 Sum_probs=64.6
Q ss_pred CceEEEEEEEecCCCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCC
Q 038976 24 DAKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDK 103 (220)
Q Consensus 24 ~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~ 103 (220)
+..+.|+.+. +++.|.||++||.++.+..+..+.+ -+.+..+|+.+|.| |.|.|.....
T Consensus 12 g~~l~~~~~g---~~~~~~ivllHG~~~~~~~w~~~~~-----------------~L~~~~~Vi~~D~~-G~G~S~~~~~ 70 (582)
T PRK05855 12 GVRLAVYEWG---DPDRPTVVLVHGYPDNHEVWDGVAP-----------------LLADRFRVVAYDVR-GAGRSSAPKR 70 (582)
T ss_pred CEEEEEEEcC---CCCCCeEEEEcCCCchHHHHHHHHH-----------------HhhcceEEEEecCC-CCCCCCCCCc
Confidence 3456555432 3467999999999877765543321 12234689999985 9999974332
Q ss_pred CcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHH
Q 038976 104 RDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 152 (220)
Q Consensus 104 ~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la 152 (220)
.. ..+.+..++|+..+++.. . ..++++|+|||+||..+-.++
T Consensus 71 ~~-~~~~~~~a~dl~~~i~~l-~-----~~~~~~lvGhS~Gg~~a~~~a 112 (582)
T PRK05855 71 TA-AYTLARLADDFAAVIDAV-S-----PDRPVHLLAHDWGSIQGWEAV 112 (582)
T ss_pred cc-ccCHHHHHHHHHHHHHHh-C-----CCCcEEEEecChHHHHHHHHH
Confidence 11 235566778888777542 1 134699999999995553333
No 49
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.63 E-value=0.00074 Score=56.38 Aligned_cols=102 Identities=18% Similarity=0.186 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCC---CcccccccchH
Q 038976 38 KKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDK---RDIRHNENGVS 114 (220)
Q Consensus 38 ~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~---~~~~~~~~~~a 114 (220)
...|+||+|||+++.++....- .+ +. .+. + ..-+.||..|.| |.+.+...-. ...........
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~--~~-~~-----~~a-~----~~g~~Vv~Pd~~-g~~~~~~~~~~~~~~~~~~~~~~~ 76 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVID--WG-WK-----AAA-D----RYGFVLVAPEQT-SYNSSNNCWDWFFTHHRARGTGEV 76 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhh--cC-hH-----HHH-H----hCCeEEEecCCc-CccccCCCCCCCCccccCCCCccH
Confidence 3789999999999876542100 00 00 000 0 012467777874 4432211000 00000111234
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHH
Q 038976 115 NDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 115 ~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~ 154 (220)
.|+.++++...+++ ....++++|+|+|.||..+-.+|.+
T Consensus 77 ~~~~~~i~~~~~~~-~id~~~i~l~G~S~Gg~~a~~~a~~ 115 (212)
T TIGR01840 77 ESLHQLIDAVKANY-SIDPNRVYVTGLSAGGGMTAVLGCT 115 (212)
T ss_pred HHHHHHHHHHHHhc-CcChhheEEEEECHHHHHHHHHHHh
Confidence 45555555444443 2445689999999999877666644
No 50
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=97.59 E-value=0.001 Score=59.28 Aligned_cols=127 Identities=17% Similarity=0.225 Sum_probs=83.5
Q ss_pred CCceEEEEEEEecCCCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeeccccc-ccccceeEEeCCCCccccccc
Q 038976 23 HDAKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGW-DKASNLLYVDQPTGTGFSYTS 101 (220)
Q Consensus 23 ~~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW-~~~anvlfiDqP~G~GfSy~~ 101 (220)
.+..++|+.+.+..++ +.+|+.+||.=-.+.-+-.+.+ -+ ..=+.++=+|. +|.|.|..
T Consensus 18 d~~~~~~~~~~~~~~~-~g~Vvl~HG~~Eh~~ry~~la~-----------------~l~~~G~~V~~~D~-RGhG~S~r- 77 (298)
T COG2267 18 DGTRLRYRTWAAPEPP-KGVVVLVHGLGEHSGRYEELAD-----------------DLAARGFDVYALDL-RGHGRSPR- 77 (298)
T ss_pred CCceEEEEeecCCCCC-CcEEEEecCchHHHHHHHHHHH-----------------HHHhCCCEEEEecC-CCCCCCCC-
Confidence 3567889988886433 3899999998554443322110 01 12246888999 59999973
Q ss_pred CCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCCh
Q 038976 102 DKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDP 181 (220)
Q Consensus 102 ~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp 181 (220)
...+...+......|+..+++..-.. ....|++|+|||.||..+...+.... -+++|+++-+|++..
T Consensus 78 ~~rg~~~~f~~~~~dl~~~~~~~~~~---~~~~p~~l~gHSmGg~Ia~~~~~~~~----------~~i~~~vLssP~~~l 144 (298)
T COG2267 78 GQRGHVDSFADYVDDLDAFVETIAEP---DPGLPVFLLGHSMGGLIALLYLARYP----------PRIDGLVLSSPALGL 144 (298)
T ss_pred CCcCCchhHHHHHHHHHHHHHHHhcc---CCCCCeEEEEeCcHHHHHHHHHHhCC----------ccccEEEEECccccC
Confidence 22222234555666766666555443 34568999999999988776665432 468999999999887
Q ss_pred h
Q 038976 182 G 182 (220)
Q Consensus 182 ~ 182 (220)
.
T Consensus 145 ~ 145 (298)
T COG2267 145 G 145 (298)
T ss_pred C
Confidence 6
No 51
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=97.57 E-value=0.0011 Score=59.41 Aligned_cols=150 Identities=13% Similarity=0.178 Sum_probs=82.5
Q ss_pred CceEEEEEEEecCCCCCCEEEEEcCCCChHHHhHHhhhc-------CCeEEcCCCceeec---cccc-ccccceeEEeCC
Q 038976 24 DAKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYEN-------GPFSIADNMSLVWN---EHGW-DKASNLLYVDQP 92 (220)
Q Consensus 24 ~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~~~e~-------GP~~i~~~~~l~~n---~~sW-~~~anvlfiDqP 92 (220)
+..++++.++.. ..+.+|+.+||==+-+ ..-.+.-+ .|+.|+.+.=..++ -..+ .+-.+|+-+|.
T Consensus 7 g~~l~~~~~~~~--~~kg~v~i~HG~~eh~-~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~- 82 (332)
T TIGR01607 7 GLLLKTYSWIVK--NAIGIIVLIHGLKSHL-RLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDL- 82 (332)
T ss_pred CCeEEEeeeecc--CCeEEEEEECCCchhh-hhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecc-
Confidence 446777776653 2457999999842222 11111101 12222211000011 1122 23468999998
Q ss_pred CCcccccccCC-CcccccccchHHHHHHHHHHHHHHC----------------CCCC-CCCEEEEeecCcccchhHHHHH
Q 038976 93 TGTGFSYTSDK-RDIRHNENGVSNDLYDFLQAFFEEH----------------PKLA-ENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 93 ~G~GfSy~~~~-~~~~~~~~~~a~d~~~fl~~f~~~~----------------p~~~-~~~~yi~GeSYgG~yvp~la~~ 154 (220)
+|.|.|-.... .....+.+..++|+..+++..-+.. .++. ..|++|+|||.||..+..++..
T Consensus 83 rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~ 162 (332)
T TIGR01607 83 QGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLEL 162 (332)
T ss_pred cccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHH
Confidence 59999875432 1112355667788888886553310 0232 5689999999999988777765
Q ss_pred HHccccCCCCceeeeeEEEEeccCC
Q 038976 155 VHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 155 i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
..+..... ....++|+++.+|.+
T Consensus 163 ~~~~~~~~--~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 163 LGKSNENN--DKLNIKGCISLSGMI 185 (332)
T ss_pred hccccccc--cccccceEEEeccce
Confidence 54321100 124688888777765
No 52
>PLN02442 S-formylglutathione hydrolase
Probab=97.48 E-value=0.002 Score=56.59 Aligned_cols=56 Identities=20% Similarity=0.210 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 114 SNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 114 a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
.+++...+..++. ....++++|+|+|+||+-+-.+|.+-. -.+++++..+|..|+.
T Consensus 126 ~~~l~~~i~~~~~---~~~~~~~~i~G~S~GG~~a~~~a~~~p----------~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 126 VKELPKLLSDNFD---QLDTSRASIFGHSMGGHGALTIYLKNP----------DKYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHH---hcCCCceEEEEEChhHHHHHHHHHhCc----------hhEEEEEEECCccCcc
Confidence 3444444555443 345567999999999986666554311 2377888889988754
No 53
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.47 E-value=0.001 Score=53.20 Aligned_cols=103 Identities=22% Similarity=0.300 Sum_probs=61.2
Q ss_pred CCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHHHH
Q 038976 40 DPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYD 119 (220)
Q Consensus 40 ~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~ 119 (220)
.|.++++||+|+++..+......-+. ... + .+++.+|+| |.|.|. .. .......++++.
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~----------~~~---~-~~~~~~d~~-g~g~s~-~~----~~~~~~~~~~~~- 79 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPA----------LAA---R-YRVIAPDLR-GHGRSD-PA----GYSLSAYADDLA- 79 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhc----------ccc---c-eEEEEeccc-CCCCCC-cc----cccHHHHHHHHH-
Confidence 67999999999988765431111000 000 1 789999998 999996 11 011111244444
Q ss_pred HHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 120 FLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 120 fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
.|+.. +...++.++|+|+||..+-.++.+..+ .++++++.++..
T Consensus 80 ---~~~~~---~~~~~~~l~G~S~Gg~~~~~~~~~~p~----------~~~~~v~~~~~~ 123 (282)
T COG0596 80 ---ALLDA---LGLEKVVLVGHSMGGAVALALALRHPD----------RVRGLVLIGPAP 123 (282)
T ss_pred ---HHHHH---hCCCceEEEEecccHHHHHHHHHhcch----------hhheeeEecCCC
Confidence 44342 333349999999997776666655432 456666555443
No 54
>PRK07581 hypothetical protein; Validated
Probab=97.44 E-value=0.0011 Score=58.98 Aligned_cols=114 Identities=14% Similarity=0.152 Sum_probs=61.1
Q ss_pred ceEEEEEEEecCCC-CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCC
Q 038976 25 AKMFYFFFESRNSK-KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDK 103 (220)
Q Consensus 25 ~~lFy~~~~s~~~~-~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~ 103 (220)
.+++|.-+... .+ ..|+||+++|+++.+.++......||.. . .+...||-+|.| |.|.|-....
T Consensus 26 ~~l~y~~~G~~-~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l-------~------~~~~~vi~~D~~-G~G~S~~~~~ 90 (339)
T PRK07581 26 ARLAYKTYGTL-NAAKDNAILYPTWYSGTHQDNEWLIGPGRAL-------D------PEKYFIIIPNMF-GNGLSSSPSN 90 (339)
T ss_pred ceEEEEecCcc-CCCCCCEEEEeCCCCCCcccchhhccCCCcc-------C------cCceEEEEecCC-CCCCCCCCCC
Confidence 45654433321 23 5577777766655443321111111110 0 245789999986 9999853321
Q ss_pred Ccccccc-----cchHHHHHHHHHHHHHHCCCCCCCC-EEEEeecCcccchhHHHHHHH
Q 038976 104 RDIRHNE-----NGVSNDLYDFLQAFFEEHPKLAEND-FYITGESYAGHYIPAFAARVH 156 (220)
Q Consensus 104 ~~~~~~~-----~~~a~d~~~fl~~f~~~~p~~~~~~-~yi~GeSYgG~yvp~la~~i~ 156 (220)
.....+. ...++|+........+. +.-++ ..|+|+|+||..+-.+|.+-.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---lgi~~~~~lvG~S~GG~va~~~a~~~P 146 (339)
T PRK07581 91 TPAPFNAARFPHVTIYDNVRAQHRLLTEK---FGIERLALVVGWSMGAQQTYHWAVRYP 146 (339)
T ss_pred CCCCCCCCCCCceeHHHHHHHHHHHHHHH---hCCCceEEEEEeCHHHHHHHHHHHHCH
Confidence 1001111 22455655433223232 44457 579999999999988887644
No 55
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.44 E-value=0.00046 Score=56.20 Aligned_cols=78 Identities=21% Similarity=0.247 Sum_probs=52.1
Q ss_pred cceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCC
Q 038976 84 SNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKE 163 (220)
Q Consensus 84 anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~ 163 (220)
++|+-+|+ +|.|+|..... .....-...|+.+.+..++++ +..++++++|+||||..+-.+|..-.+
T Consensus 1 f~vi~~d~-rG~g~S~~~~~---~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~vG~S~Gg~~~~~~a~~~p~------ 67 (230)
T PF00561_consen 1 FDVILFDL-RGFGYSSPHWD---PDFPDYTTDDLAADLEALREA---LGIKKINLVGHSMGGMLALEYAAQYPE------ 67 (230)
T ss_dssp EEEEEEEC-TTSTTSSSCCG---SGSCTHCHHHHHHHHHHHHHH---HTTSSEEEEEETHHHHHHHHHHHHSGG------
T ss_pred CEEEEEeC-CCCCCCCCCcc---CCcccccHHHHHHHHHHHHHH---hCCCCeEEEEECCChHHHHHHHHHCch------
Confidence 36888997 59999974100 011222345666666666665 334569999999999888777755332
Q ss_pred CceeeeeEEEEeccC
Q 038976 164 GIHINLKGFAIGNGL 178 (220)
Q Consensus 164 ~~~inLkGi~igng~ 178 (220)
+++++++.++.
T Consensus 68 ----~v~~lvl~~~~ 78 (230)
T PF00561_consen 68 ----RVKKLVLISPP 78 (230)
T ss_dssp ----GEEEEEEESES
T ss_pred ----hhcCcEEEeee
Confidence 68888888875
No 56
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.42 E-value=0.0016 Score=58.10 Aligned_cols=108 Identities=19% Similarity=0.167 Sum_probs=75.0
Q ss_pred CCceEEEEEEEecCC-CCCCEEEEEcCCCChHHH-h----HHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcc
Q 038976 23 HDAKMFYFFFESRNS-KKDPVVIWLTGGPGCSSE-L----AVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTG 96 (220)
Q Consensus 23 ~~~~lFy~~~~s~~~-~~~Pl~lwlnGGPG~SS~-~----g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~G 96 (220)
.+..+|..++..... +.+-+|+.+||.=+-+|. + ..|..+| .-+.-+|+ .|.|
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g--------------------~~v~a~D~-~GhG 94 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSG--------------------FAVYAIDY-EGHG 94 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHhCC--------------------CeEEEeec-cCCC
Confidence 356788777766544 366789999997665542 1 2222222 23667999 6999
Q ss_pred cccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHH
Q 038976 97 FSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 97 fSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~ 154 (220)
.|-+. ..+..+.+.+++|...|+..+- ..++++..|.|++|||.||..+-.++.+
T Consensus 95 ~SdGl--~~yi~~~d~~v~D~~~~~~~i~-~~~e~~~lp~FL~GeSMGGAV~Ll~~~k 149 (313)
T KOG1455|consen 95 RSDGL--HAYVPSFDLVVDDVISFFDSIK-EREENKGLPRFLFGESMGGAVALLIALK 149 (313)
T ss_pred cCCCC--cccCCcHHHHHHHHHHHHHHHh-hccccCCCCeeeeecCcchHHHHHHHhh
Confidence 99643 3456788889999888776554 4468888899999999999877666654
No 57
>PLN02511 hydrolase
Probab=97.40 E-value=0.0017 Score=59.69 Aligned_cols=116 Identities=16% Similarity=0.242 Sum_probs=69.6
Q ss_pred EEEEEcCCCCCceEEEEEEEe--cCC-CCCCEEEEEcCCCChHHH-h-HHhhhcCCeEEcCCCceeecccccccccceeE
Q 038976 14 AGYYKLPHSHDAKMFYFFFES--RNS-KKDPVVIWLTGGPGCSSE-L-AVFYENGPFSIADNMSLVWNEHGWDKASNLLY 88 (220)
Q Consensus 14 sGyl~v~~~~~~~lFy~~~~s--~~~-~~~Pl~lwlnGGPG~SS~-~-g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlf 88 (220)
.-++...+. ..+.+.++.. ... .++|+||.+||..|+|.. + ..+.. ....+-.+++-
T Consensus 73 re~l~~~DG--~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~----------------~~~~~g~~vv~ 134 (388)
T PLN02511 73 RECLRTPDG--GAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLL----------------RARSKGWRVVV 134 (388)
T ss_pred EEEEECCCC--CEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHH----------------HHHHCCCEEEE
Confidence 345555443 3444433332 122 378999999999987642 1 11110 00124467999
Q ss_pred EeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHH
Q 038976 89 VDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 89 iDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~ 154 (220)
+|. +|.|-|-..... ......++|+.++++..-.++| ..+++++|+|.||..+-.++.+
T Consensus 135 ~d~-rG~G~s~~~~~~---~~~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~ 193 (388)
T PLN02511 135 FNS-RGCADSPVTTPQ---FYSASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGE 193 (388)
T ss_pred Eec-CCCCCCCCCCcC---EEcCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHh
Confidence 998 599988533221 1123456788888866555554 4689999999999886655543
No 58
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=97.38 E-value=0.0028 Score=55.17 Aligned_cols=122 Identities=18% Similarity=0.209 Sum_probs=72.3
Q ss_pred ceEEEEEEEecCCCCCCEEEEEcCCCChHHH-hHHhhhcCCeEEcCCCceeeccccccc-ccceeEEeCCCCcccccccC
Q 038976 25 AKMFYFFFESRNSKKDPVVIWLTGGPGCSSE-LAVFYENGPFSIADNMSLVWNEHGWDK-ASNLLYVDQPTGTGFSYTSD 102 (220)
Q Consensus 25 ~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~-~g~~~e~GP~~i~~~~~l~~n~~sW~~-~anvlfiDqP~G~GfSy~~~ 102 (220)
..++=++++.. +++.|-+|.++||++.... .-.+... -..+.+ -.+++-+|.| |.|.|....
T Consensus 12 ~~l~g~~~~p~-~~~~~~vv~i~gg~~~~~g~~~~~~~l--------------a~~l~~~G~~v~~~Dl~-G~G~S~~~~ 75 (274)
T TIGR03100 12 ETLVGVLHIPG-ASHTTGVLIVVGGPQYRVGSHRQFVLL--------------ARRLAEAGFPVLRFDYR-GMGDSEGEN 75 (274)
T ss_pred cEEEEEEEcCC-CCCCCeEEEEeCCccccCCchhHHHHH--------------HHHHHHCCCEEEEeCCC-CCCCCCCCC
Confidence 34554445432 2345677788999863210 0001000 011222 3689999985 999885321
Q ss_pred CCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCC
Q 038976 103 KRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTD 180 (220)
Q Consensus 103 ~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d 180 (220)
.+.....+|+..+++.+-+..|.+ .++.++|+|.||..+-.+|.. . -.++|+++.||++.
T Consensus 76 -----~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~----~-------~~v~~lil~~p~~~ 135 (274)
T TIGR03100 76 -----LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPA----D-------LRVAGLVLLNPWVR 135 (274)
T ss_pred -----CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhh----C-------CCccEEEEECCccC
Confidence 233446678888876554444443 469999999999765544421 1 25899999999875
No 59
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=97.37 E-value=0.0011 Score=59.49 Aligned_cols=75 Identities=20% Similarity=0.158 Sum_probs=48.4
Q ss_pred cccceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCC-CCEEEEeecCcccchhHHHHHHHcccc
Q 038976 82 KASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAE-NDFYITGESYAGHYIPAFAARVHNGNK 160 (220)
Q Consensus 82 ~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~-~~~yi~GeSYgG~yvp~la~~i~~~n~ 160 (220)
+...|+.+|.| |.|-|.. .. .+....++|+.++|+. +.- +.+.|+|+|+||..+-.+|.+-.
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~~---~~--~~~~~~a~dl~~ll~~-------l~l~~~~~lvG~SmGG~vA~~~A~~~P---- 160 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSLD---VP--IDTADQADAIALLLDA-------LGIARLHAFVGYSYGALVGLQFASRHP---- 160 (343)
T ss_pred cccEEEEEeCC-CCCCCCC---CC--CCHHHHHHHHHHHHHH-------cCCCcceEEEEECHHHHHHHHHHHHCh----
Confidence 56789999986 7775521 11 2334456666655533 222 24679999999998888876533
Q ss_pred CCCCceeeeeEEEEeccCC
Q 038976 161 AKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 161 ~~~~~~inLkGi~igng~~ 179 (220)
-.++++++.++..
T Consensus 161 ------~~V~~LvLi~s~~ 173 (343)
T PRK08775 161 ------ARVRTLVVVSGAH 173 (343)
T ss_pred ------HhhheEEEECccc
Confidence 2477778777643
No 60
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=97.29 E-value=0.0028 Score=60.76 Aligned_cols=130 Identities=15% Similarity=0.088 Sum_probs=79.4
Q ss_pred CCceEEEEEEEecCCCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccc-cccceeEEeCCCCccccccc
Q 038976 23 HDAKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWD-KASNLLYVDQPTGTGFSYTS 101 (220)
Q Consensus 23 ~~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~-~~anvlfiDqP~G~GfSy~~ 101 (220)
.+..|+..++........|+||.++|-...+.... +.. .....-|. +-..++-+|. +|.|.|-..
T Consensus 5 DG~~L~~~~~~P~~~~~~P~Il~~~gyg~~~~~~~-----~~~--------~~~~~~l~~~Gy~vv~~D~-RG~g~S~g~ 70 (550)
T TIGR00976 5 DGTRLAIDVYRPAGGGPVPVILSRTPYGKDAGLRW-----GLD--------KTEPAWFVAQGYAVVIQDT-RGRGASEGE 70 (550)
T ss_pred CCCEEEEEEEecCCCCCCCEEEEecCCCCchhhcc-----ccc--------cccHHHHHhCCcEEEEEec-cccccCCCc
Confidence 34578777776543337899999997533221100 000 00011122 3468999997 799999643
Q ss_pred CCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCCh
Q 038976 102 DKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDP 181 (220)
Q Consensus 102 ~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp 181 (220)
... .+ ...++|+.+++ +|+.+.|. ...++.++|+||||..+-.+|.. . .-.||+++..+++.|.
T Consensus 71 ~~~---~~-~~~~~D~~~~i-~~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~---~-------~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 71 FDL---LG-SDEAADGYDLV-DWIAKQPW-CDGNVGMLGVSYLAVTQLLAAVL---Q-------PPALRAIAPQEGVWDL 134 (550)
T ss_pred eEe---cC-cccchHHHHHH-HHHHhCCC-CCCcEEEEEeChHHHHHHHHhcc---C-------CCceeEEeecCcccch
Confidence 211 11 44677888777 57777653 34589999999999765555432 1 1358999988888774
Q ss_pred h
Q 038976 182 G 182 (220)
Q Consensus 182 ~ 182 (220)
.
T Consensus 135 ~ 135 (550)
T TIGR00976 135 Y 135 (550)
T ss_pred h
Confidence 4
No 61
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.26 E-value=0.0031 Score=57.35 Aligned_cols=140 Identities=14% Similarity=0.133 Sum_probs=79.7
Q ss_pred cCCCCCceEEEEEEEecCCC---CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccc-cccceeEEeCCCC
Q 038976 19 LPHSHDAKMFYFFFESRNSK---KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWD-KASNLLYVDQPTG 94 (220)
Q Consensus 19 v~~~~~~~lFy~~~~s~~~~---~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~-~~anvlfiDqP~G 94 (220)
|..++...++.+.|.....+ .+|++||+|||=-|-+.- ......+-.++. +.++.+-|=
T Consensus 66 v~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~-------------~~~~y~~~~~~~a~~~~~vvvS---- 128 (336)
T KOG1515|consen 66 VTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA-------------NSPAYDSFCTRLAAELNCVVVS---- 128 (336)
T ss_pred eEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC-------------CCchhHHHHHHHHHHcCeEEEe----
Confidence 33345567889999876532 789999999995553310 000011111122 334444332
Q ss_pred cccccccCCCcccccccchHHHHHHHHHH-HHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEE
Q 038976 95 TGFSYTSDKRDIRHNENGVSNDLYDFLQA-FFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFA 173 (220)
Q Consensus 95 ~GfSy~~~~~~~~~~~~~~a~d~~~fl~~-f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~ 173 (220)
++|--. .+..++...+..-+.+..++.+ |++..-.++ +++|+|.|.||..+-.+|.++.+.. ...+.|+|++
T Consensus 129 VdYRLA-PEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~----~~~~ki~g~i 201 (336)
T KOG1515|consen 129 VDYRLA-PEHPFPAAYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK----LSKPKIKGQI 201 (336)
T ss_pred cCcccC-CCCCCCccchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc----CCCcceEEEE
Confidence 222211 1111222222222233333333 666554443 4999999999999999999998642 1258899999
Q ss_pred EeccCCChh
Q 038976 174 IGNGLTDPG 182 (220)
Q Consensus 174 igng~~dp~ 182 (220)
+.-|++...
T Consensus 202 li~P~~~~~ 210 (336)
T KOG1515|consen 202 LIYPFFQGT 210 (336)
T ss_pred EEecccCCC
Confidence 999987543
No 62
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=97.23 E-value=0.0043 Score=56.59 Aligned_cols=128 Identities=11% Similarity=0.034 Sum_probs=70.9
Q ss_pred CceEEEEEEEecCCCCCCEEEEEcCCCChHHHhHH----------hhhc-CCeEEcCCCceeecccccccccceeEEeCC
Q 038976 24 DAKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAV----------FYEN-GPFSIADNMSLVWNEHGWDKASNLLYVDQP 92 (220)
Q Consensus 24 ~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~----------~~e~-GP~~i~~~~~l~~n~~sW~~~anvlfiDqP 92 (220)
+.+++|.-+-..+....|.||.+||-+|.+..+.. +..+ ||-. + --.+...||-+|.|
T Consensus 32 ~~~~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~----------~-l~~~~~~vi~~Dl~ 100 (379)
T PRK00175 32 PVELAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGK----------P-IDTDRYFVICSNVL 100 (379)
T ss_pred CceEEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCC----------c-cCccceEEEeccCC
Confidence 35677765532211247999999999987764321 1110 1000 0 00245689999987
Q ss_pred CCcccccccCC------Ccc-----cccccchHHHHHHHHHHHHHHCCCCCCCC-EEEEeecCcccchhHHHHHHHcccc
Q 038976 93 TGTGFSYTSDK------RDI-----RHNENGVSNDLYDFLQAFFEEHPKLAEND-FYITGESYAGHYIPAFAARVHNGNK 160 (220)
Q Consensus 93 ~G~GfSy~~~~------~~~-----~~~~~~~a~d~~~fl~~f~~~~p~~~~~~-~yi~GeSYgG~yvp~la~~i~~~n~ 160 (220)
-+.|.|..... ..+ ..+.+ ++.+.+.+++++ +.-.+ ++|+|+|+||..+-.+|.+-.
T Consensus 101 G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~---l~~~~~~~lvG~S~Gg~ia~~~a~~~p---- 169 (379)
T PRK00175 101 GGCKGSTGPSSINPDTGKPYGSDFPVITIR----DWVRAQARLLDA---LGITRLAAVVGGSMGGMQALEWAIDYP---- 169 (379)
T ss_pred CCCCCCCCCCCCCCCCCCcccCCCCcCCHH----HHHHHHHHHHHH---hCCCCceEEEEECHHHHHHHHHHHhCh----
Confidence 44455532110 000 12333 444444455553 33346 589999999988877777632
Q ss_pred CCCCceeeeeEEEEeccCC
Q 038976 161 AKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 161 ~~~~~~inLkGi~igng~~ 179 (220)
-.++++++.|+..
T Consensus 170 ------~~v~~lvl~~~~~ 182 (379)
T PRK00175 170 ------DRVRSALVIASSA 182 (379)
T ss_pred ------HhhhEEEEECCCc
Confidence 2477778777543
No 63
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.23 E-value=0.00069 Score=59.49 Aligned_cols=110 Identities=16% Similarity=0.177 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCCCChH-HHhH-HhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHH
Q 038976 38 KKDPVVIWLTGGPGCS-SELA-VFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSN 115 (220)
Q Consensus 38 ~~~Pl~lwlnGGPG~S-S~~g-~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~ 115 (220)
+++|++|++||-.+.. ..+- .+. +...-.+..||+.+|-+.+..-.|. . ...+...+++
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~---------------~~ll~~~~~nVi~vD~~~~~~~~y~---~-a~~~~~~v~~ 94 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLR---------------KAYLSRGDYNVIVVDWGRGANPNYP---Q-AVNNTRVVGA 94 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHH---------------HHHHhcCCCEEEEEECccccccChH---H-HHHhHHHHHH
Confidence 4789999999976644 1110 000 0000013578999997543111111 0 1123344567
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEecc
Q 038976 116 DLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNG 177 (220)
Q Consensus 116 d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 177 (220)
++..+|+...+.. ....++++|+|+|.||+.+-.+|.++.+ +++.|+..+|
T Consensus 95 ~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~----------~v~~iv~LDP 145 (275)
T cd00707 95 ELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG----------KLGRITGLDP 145 (275)
T ss_pred HHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC----------ccceeEEecC
Confidence 7777775554432 2344679999999999999888876542 3556666554
No 64
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.14 E-value=0.0018 Score=57.43 Aligned_cols=106 Identities=25% Similarity=0.387 Sum_probs=70.1
Q ss_pred CCCCEEEEEcCCCChHHH-hHHhh-hcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHH
Q 038976 38 KKDPVVIWLTGGPGCSSE-LAVFY-ENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSN 115 (220)
Q Consensus 38 ~~~Pl~lwlnGGPG~SS~-~g~~~-e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~ 115 (220)
+.-|+++.+||| |.|.+ +..|. |+ +. .-..-++-+|- +|.|-+-..+..+ .+.+..++
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~el-------------~s---~~~~r~~a~Dl-RgHGeTk~~~e~d--lS~eT~~K 131 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFASEL-------------KS---KIRCRCLALDL-RGHGETKVENEDD--LSLETMSK 131 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHHHH-------------Hh---hcceeEEEeec-cccCccccCChhh--cCHHHHHH
Confidence 377999999998 66654 34442 11 00 00112477896 9999998777654 46677899
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEec
Q 038976 116 DLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGN 176 (220)
Q Consensus 116 d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~ign 176 (220)
|+...++++|..-| .++.|+|||.||..+...|..=. .-+|-|+.+.+
T Consensus 132 D~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~k~---------lpsl~Gl~viD 179 (343)
T KOG2564|consen 132 DFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAASKT---------LPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHhccCC----CceEEEeccccchhhhhhhhhhh---------chhhhceEEEE
Confidence 99999988885422 36999999999988755443311 13467776654
No 65
>PRK10985 putative hydrolase; Provisional
Probab=97.14 E-value=0.01 Score=52.76 Aligned_cols=134 Identities=15% Similarity=0.132 Sum_probs=68.2
Q ss_pred EEEEEcCCCCCceEEEEEEEecCCC-CCCEEEEEcCCCChHHH-hH-HhhhcCCeEEcCCCceeecccccccccceeEEe
Q 038976 14 AGYYKLPHSHDAKMFYFFFESRNSK-KDPVVIWLTGGPGCSSE-LA-VFYENGPFSIADNMSLVWNEHGWDKASNLLYVD 90 (220)
Q Consensus 14 sGyl~v~~~~~~~lFy~~~~s~~~~-~~Pl~lwlnGGPG~SS~-~g-~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiD 90 (220)
.-.++..+. ..+.+++.+....+ ++|+||.+||.+|.+.. .. .+.+ . +. .+-.+++-+|
T Consensus 33 ~~~~~~~dg--~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~---~-------l~------~~G~~v~~~d 94 (324)
T PRK10985 33 WQRLELPDG--DFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLE---A-------AQ------KRGWLGVVMH 94 (324)
T ss_pred eeEEECCCC--CEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHH---H-------HH------HCCCEEEEEe
Confidence 334555443 33433333332223 78999999999987432 11 0110 0 00 0123567778
Q ss_pred CCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeee
Q 038976 91 QPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLK 170 (220)
Q Consensus 91 qP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLk 170 (220)
. +|.|-|-......+ .....+|+..++ +++.+ ++...+++++|+|+||..+-.++.+-.+ ...++
T Consensus 95 ~-rG~g~~~~~~~~~~---~~~~~~D~~~~i-~~l~~--~~~~~~~~~vG~S~GG~i~~~~~~~~~~--------~~~~~ 159 (324)
T PRK10985 95 F-RGCSGEPNRLHRIY---HSGETEDARFFL-RWLQR--EFGHVPTAAVGYSLGGNMLACLLAKEGD--------DLPLD 159 (324)
T ss_pred C-CCCCCCccCCcceE---CCCchHHHHHHH-HHHHH--hCCCCCEEEEEecchHHHHHHHHHhhCC--------CCCcc
Confidence 7 58764422111111 112346766655 34443 2334689999999999876554443211 12366
Q ss_pred EEEEeccCCC
Q 038976 171 GFAIGNGLTD 180 (220)
Q Consensus 171 Gi~igng~~d 180 (220)
++++.++-.+
T Consensus 160 ~~v~i~~p~~ 169 (324)
T PRK10985 160 AAVIVSAPLM 169 (324)
T ss_pred EEEEEcCCCC
Confidence 6555555444
No 66
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.08 E-value=0.0039 Score=57.87 Aligned_cols=97 Identities=13% Similarity=0.150 Sum_probs=60.8
Q ss_pred ccceeEEeCCCCcccccccCCCcc----cccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHcc
Q 038976 83 ASNLLYVDQPTGTGFSYTSDKRDI----RHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNG 158 (220)
Q Consensus 83 ~anvlfiDqP~G~GfSy~~~~~~~----~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~ 158 (220)
.|-||+++. +--|-|........ --+.+|+-+|+..|++.+-.++....+.|+.++|-||||..+.-+-.+-.+
T Consensus 59 ~a~~v~lEH-RyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~- 136 (434)
T PF05577_consen 59 GALVVALEH-RYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH- 136 (434)
T ss_dssp TEEEEEE---TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT-
T ss_pred CCcEEEeeh-hhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC-
Confidence 456889997 89999975432111 136688899999999888777766677799999999999766555444321
Q ss_pred ccCCCCceeeeeEEEEeccCCChhccccchhH
Q 038976 159 NKAKEGIHINLKGFAIGNGLTDPGVQYKAYPD 190 (220)
Q Consensus 159 n~~~~~~~inLkGi~igng~~dp~~q~~~~~~ 190 (220)
-+.|.+--++.+....++..|.+
T Consensus 137 ---------~~~ga~ASSapv~a~~df~~y~~ 159 (434)
T PF05577_consen 137 ---------LFDGAWASSAPVQAKVDFWEYFE 159 (434)
T ss_dssp ---------T-SEEEEET--CCHCCTTTHHHH
T ss_pred ---------eeEEEEeccceeeeecccHHHHH
Confidence 25677777777777666554443
No 67
>PRK10115 protease 2; Provisional
Probab=97.07 E-value=0.011 Score=58.59 Aligned_cols=137 Identities=12% Similarity=0.078 Sum_probs=76.1
Q ss_pred CCCceEEEEEEEecC---CCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccc
Q 038976 22 SHDAKMFYFFFESRN---SKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFS 98 (220)
Q Consensus 22 ~~~~~lFy~~~~s~~---~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfS 98 (220)
..+..+-.|++..+. +...|++|+.+||||.+...++..+ -..|.+.-=++.+=.++|.| .
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~---------------~~~l~~rG~~v~~~n~RGs~-g 487 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFS---------------RLSLLDRGFVYAIVHVRGGG-E 487 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHH---------------HHHHHHCCcEEEEEEcCCCC-c
Confidence 334445544443322 2267999999999998853211110 11244433333333367654 2
Q ss_pred cccC--CCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEec
Q 038976 99 YTSD--KRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGN 176 (220)
Q Consensus 99 y~~~--~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~ign 176 (220)
|+.. ..+....-....+|+..+.+ ++.+..--...++.|.|-||||..+-.++.+ . .-.+++++...
T Consensus 488 ~G~~w~~~g~~~~k~~~~~D~~a~~~-~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~---~-------Pdlf~A~v~~v 556 (686)
T PRK10115 488 LGQQWYEDGKFLKKKNTFNDYLDACD-ALLKLGYGSPSLCYGMGGSAGGMLMGVAINQ---R-------PELFHGVIAQV 556 (686)
T ss_pred cCHHHHHhhhhhcCCCcHHHHHHHHH-HHHHcCCCChHHeEEEEECHHHHHHHHHHhc---C-------hhheeEEEecC
Confidence 3221 11100111235678877774 4444444455679999999999855444322 1 12489999999
Q ss_pred cCCChhccc
Q 038976 177 GLTDPGVQY 185 (220)
Q Consensus 177 g~~dp~~q~ 185 (220)
|++|....+
T Consensus 557 p~~D~~~~~ 565 (686)
T PRK10115 557 PFVDVVTTM 565 (686)
T ss_pred CchhHhhhc
Confidence 999987543
No 68
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=97.02 E-value=0.0014 Score=54.36 Aligned_cols=93 Identities=15% Similarity=0.160 Sum_probs=58.9
Q ss_pred ccceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCC
Q 038976 83 ASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAK 162 (220)
Q Consensus 83 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~ 162 (220)
=..|+.+|..-+.||+..-.............+|+.+++ +++.+.+....+++.|+|.|+||+.+-.++.+-.
T Consensus 14 Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i-~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~------ 86 (213)
T PF00326_consen 14 GYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAI-EYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHP------ 86 (213)
T ss_dssp T-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHH-HHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTC------
T ss_pred CEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHH-HHHhccccccceeEEEEcccccccccchhhcccc------
Confidence 357899998655666543222111112234567888877 4445544556678999999999998887776211
Q ss_pred CCceeeeeEEEEeccCCChhcccc
Q 038976 163 EGIHINLKGFAIGNGLTDPGVQYK 186 (220)
Q Consensus 163 ~~~~inLkGi~igng~~dp~~q~~ 186 (220)
-.++.++.++|.+|+.....
T Consensus 87 ----~~f~a~v~~~g~~d~~~~~~ 106 (213)
T PF00326_consen 87 ----DRFKAAVAGAGVSDLFSYYG 106 (213)
T ss_dssp ----CGSSEEEEESE-SSTTCSBH
T ss_pred ----eeeeeeeccceecchhcccc
Confidence 23688999999999776544
No 69
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=96.94 E-value=0.009 Score=53.84 Aligned_cols=137 Identities=15% Similarity=0.152 Sum_probs=86.6
Q ss_pred ccceEEEEEcCCCCCceEEEEEEEecCCC-CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccc-ccee
Q 038976 10 LGHHAGYYKLPHSHDAKMFYFFFESRNSK-KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKA-SNLL 87 (220)
Q Consensus 10 ~~~ysGyl~v~~~~~~~lFy~~~~s~~~~-~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~-anvl 87 (220)
.....+|++++. +++++.+. -+ +.|++|.|||=|=.+-.+-.-. | ..... ..++
T Consensus 20 ~~~~hk~~~~~g-----I~~h~~e~--g~~~gP~illlHGfPe~wyswr~q~---~--------------~la~~~~rvi 75 (322)
T KOG4178|consen 20 SAISHKFVTYKG-----IRLHYVEG--GPGDGPIVLLLHGFPESWYSWRHQI---P--------------GLASRGYRVI 75 (322)
T ss_pred hhcceeeEEEcc-----EEEEEEee--cCCCCCEEEEEccCCccchhhhhhh---h--------------hhhhcceEEE
Confidence 334567777643 67777777 34 8999999999886654321100 0 01112 4689
Q ss_pred EEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCcee
Q 038976 88 YVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHI 167 (220)
Q Consensus 88 fiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~i 167 (220)
.+|. +|-|+|-..... ...+...++.|+..+| .. +..++++++||+||+..+=.+|..-.+..+ -.+
T Consensus 76 A~Dl-rGyG~Sd~P~~~-~~Yt~~~l~~di~~ll----d~---Lg~~k~~lvgHDwGaivaw~la~~~Perv~----~lv 142 (322)
T KOG4178|consen 76 APDL-RGYGFSDAPPHI-SEYTIDELVGDIVALL----DH---LGLKKAFLVGHDWGAIVAWRLALFYPERVD----GLV 142 (322)
T ss_pred ecCC-CCCCCCCCCCCc-ceeeHHHHHHHHHHHH----HH---hccceeEEEeccchhHHHHHHHHhChhhcc----eEE
Confidence 9998 799999654431 1234556777776666 32 335689999999999988888877665422 124
Q ss_pred eeeEEEEeccCCChhcc
Q 038976 168 NLKGFAIGNGLTDPGVQ 184 (220)
Q Consensus 168 nLkGi~igng~~dp~~q 184 (220)
++++... ||..+|...
T Consensus 143 ~~nv~~~-~p~~~~~~~ 158 (322)
T KOG4178|consen 143 TLNVPFP-NPKLKPLDS 158 (322)
T ss_pred EecCCCC-Ccccchhhh
Confidence 4444444 666666543
No 70
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.80 E-value=0.0066 Score=57.11 Aligned_cols=80 Identities=14% Similarity=0.098 Sum_probs=49.8
Q ss_pred ccceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCC
Q 038976 83 ASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAK 162 (220)
Q Consensus 83 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~ 162 (220)
..|||-+|-| |-|-|.-. .. ..+...+++++.++|+...+.. .+.-.+++|+|+|.|||.+-.+|.+..
T Consensus 73 d~nVI~VDw~-g~g~s~y~--~a-~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p------ 141 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYP--TS-AAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTK------ 141 (442)
T ss_pred CCEEEEEECC-CcCCCCCc--cc-cccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCC------
Confidence 4799999986 44433211 11 1223456777777775443332 355568999999999998887776432
Q ss_pred CCceeeeeEEEEecc
Q 038976 163 EGIHINLKGFAIGNG 177 (220)
Q Consensus 163 ~~~~inLkGi~igng 177 (220)
-.+..|++.+|
T Consensus 142 ----~rV~rItgLDP 152 (442)
T TIGR03230 142 ----HKVNRITGLDP 152 (442)
T ss_pred ----cceeEEEEEcC
Confidence 13556666555
No 71
>PLN00021 chlorophyllase
Probab=96.80 E-value=0.013 Score=52.64 Aligned_cols=94 Identities=13% Similarity=0.075 Sum_probs=51.1
Q ss_pred CCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeeccccccc-ccceeEEeCCCCcccccccCCCcccccccchHHH
Q 038976 38 KKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDK-ASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSND 116 (220)
Q Consensus 38 ~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~-~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d 116 (220)
.+.|+|+|+||+.+....+..+.+ .+.+ -..++.+|-+ | ++.... ......+.+
T Consensus 50 g~~PvVv~lHG~~~~~~~y~~l~~-----------------~Las~G~~VvapD~~-g--~~~~~~-----~~~i~d~~~ 104 (313)
T PLN00021 50 GTYPVLLFLHGYLLYNSFYSQLLQ-----------------HIASHGFIVVAPQLY-T--LAGPDG-----TDEIKDAAA 104 (313)
T ss_pred CCCCEEEEECCCCCCcccHHHHHH-----------------HHHhCCCEEEEecCC-C--cCCCCc-----hhhHHHHHH
Confidence 378999999998765443322211 0111 1456777754 3 221111 111112344
Q ss_pred HHHHHHHHHHH----CCCCCCCCEEEEeecCcccchhHHHHHHH
Q 038976 117 LYDFLQAFFEE----HPKLAENDFYITGESYAGHYIPAFAARVH 156 (220)
Q Consensus 117 ~~~fl~~f~~~----~p~~~~~~~yi~GeSYgG~yvp~la~~i~ 156 (220)
+..++.+-++. ..+...++++|+|||.||..+-.+|.+..
T Consensus 105 ~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~ 148 (313)
T PLN00021 105 VINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKA 148 (313)
T ss_pred HHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcc
Confidence 44545443322 11234467999999999999888886643
No 72
>PRK10162 acetyl esterase; Provisional
Probab=96.76 E-value=0.014 Score=52.11 Aligned_cols=46 Identities=15% Similarity=0.047 Sum_probs=35.2
Q ss_pred CCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCCh
Q 038976 132 AENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDP 181 (220)
Q Consensus 132 ~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp 181 (220)
..+++.|+|+|.||+.+-.++..+.+... ....++++++..|++|.
T Consensus 152 d~~~i~l~G~SaGG~la~~~a~~~~~~~~----~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 152 NMSRIGFAGDSAGAMLALASALWLRDKQI----DCGKVAGVLLWYGLYGL 197 (318)
T ss_pred ChhHEEEEEECHHHHHHHHHHHHHHhcCC----CccChhheEEECCccCC
Confidence 34579999999999999999887765321 12457889999998874
No 73
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.59 E-value=0.0088 Score=59.80 Aligned_cols=135 Identities=21% Similarity=0.173 Sum_probs=76.7
Q ss_pred ceEEEEEEEecC-CC--CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeeccccccc-ccceeEEeCCCCcccccc
Q 038976 25 AKMFYFFFESRN-SK--KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDK-ASNLLYVDQPTGTGFSYT 100 (220)
Q Consensus 25 ~~lFy~~~~s~~-~~--~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~-~anvlfiDqP~G~GfSy~ 100 (220)
....+++...++ ++ .-|++++..|||++-+.... + .+..|...+.. -+-++.|| ++|+|+.-.
T Consensus 508 ~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~------~------~~~~~~~~~s~~g~~v~~vd-~RGs~~~G~ 574 (755)
T KOG2100|consen 508 ITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSK------F------SVDWNEVVVSSRGFAVLQVD-GRGSGGYGW 574 (755)
T ss_pred EEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeee------E------EecHHHHhhccCCeEEEEEc-CCCcCCcch
Confidence 345556555543 22 67999999999993222110 1 12223333333 23578899 599987532
Q ss_pred cCCCcccccc-cchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 101 SDKRDIRHNE-NGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 101 ~~~~~~~~~~-~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
.-......+. ..-.+|....++.+.+.+ ..-..++.|+|.||||...-. ++.+.+ .--+|.-+..+|.+
T Consensus 575 ~~~~~~~~~lG~~ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy~t~~----~l~~~~-----~~~fkcgvavaPVt 644 (755)
T KOG2100|consen 575 DFRSALPRNLGDVEVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGYLTLK----LLESDP-----GDVFKCGVAVAPVT 644 (755)
T ss_pred hHHHHhhhhcCCcchHHHHHHHHHHHhcc-cccHHHeEEeccChHHHHHHH----HhhhCc-----CceEEEEEEeccee
Confidence 2111111121 123567777777776665 444557999999999975433 332211 13466667778888
Q ss_pred Chh
Q 038976 180 DPG 182 (220)
Q Consensus 180 dp~ 182 (220)
|-.
T Consensus 645 d~~ 647 (755)
T KOG2100|consen 645 DWL 647 (755)
T ss_pred eee
Confidence 866
No 74
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.54 E-value=0.017 Score=47.92 Aligned_cols=102 Identities=12% Similarity=0.231 Sum_probs=65.5
Q ss_pred EEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeeccccccc-ccceeEEeCCCCcccccccCCCcccccccchHHHHHHH
Q 038976 42 VVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDK-ASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDF 120 (220)
Q Consensus 42 l~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~-~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~f 120 (220)
.|+++++|=|.++.+--+.. ...+ ..+|..|+.| |-+ . ......+.+++|++..+.
T Consensus 2 ~lf~~p~~gG~~~~y~~la~-----------------~l~~~~~~v~~i~~~-~~~----~-~~~~~~si~~la~~y~~~ 58 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLAR-----------------ALPDDVIGVYGIEYP-GRG----D-DEPPPDSIEELASRYAEA 58 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHH-----------------HHTTTEEEEEEECST-TSC----T-TSHEESSHHHHHHHHHHH
T ss_pred eEEEEcCCccCHHHHHHHHH-----------------hCCCCeEEEEEEecC-CCC----C-CCCCCCCHHHHHHHHHHH
Confidence 57788988786665433321 0112 2568888876 544 1 111234566677776665
Q ss_pred HHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 121 LQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 121 l~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
|+. ..| ..|++|+|+|+||..+=.+|.+|.++. ...+.|++.++..
T Consensus 59 I~~---~~~---~gp~~L~G~S~Gg~lA~E~A~~Le~~G-------~~v~~l~liD~~~ 104 (229)
T PF00975_consen 59 IRA---RQP---EGPYVLAGWSFGGILAFEMARQLEEAG-------EEVSRLILIDSPP 104 (229)
T ss_dssp HHH---HTS---SSSEEEEEETHHHHHHHHHHHHHHHTT--------SESEEEEESCSS
T ss_pred hhh---hCC---CCCeeehccCccHHHHHHHHHHHHHhh-------hccCceEEecCCC
Confidence 533 222 229999999999999999999998753 5577888888543
No 75
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=96.48 E-value=0.042 Score=49.33 Aligned_cols=131 Identities=12% Similarity=0.070 Sum_probs=69.0
Q ss_pred CceEEEEEEEecCCCCCCEEEEEcCCCChHHHhH--------Hhhhc-CCeEEcCCCceeecccccccccceeEEeCCCC
Q 038976 24 DAKMFYFFFESRNSKKDPVVIWLTGGPGCSSELA--------VFYEN-GPFSIADNMSLVWNEHGWDKASNLLYVDQPTG 94 (220)
Q Consensus 24 ~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g--------~~~e~-GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G 94 (220)
+.+++|.-+...+....|.||++||=.|.+.... .+... ||-. .--.+...||-+|.| |
T Consensus 15 ~~~~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~-----------~l~~~~~~vi~~D~~-G 82 (351)
T TIGR01392 15 DVRVAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGR-----------AIDTDRYFVVCSNVL-G 82 (351)
T ss_pred CceEEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCC-----------CcCCCceEEEEecCC-C
Confidence 4567777664422235688999999777543210 11100 1000 001245689999986 7
Q ss_pred --cccccccC--CCc--cccc-ccchHHHHHHHHHHHHHHCCCCCCCC-EEEEeecCcccchhHHHHHHHccccCCCCce
Q 038976 95 --TGFSYTSD--KRD--IRHN-ENGVSNDLYDFLQAFFEEHPKLAEND-FYITGESYAGHYIPAFAARVHNGNKAKEGIH 166 (220)
Q Consensus 95 --~GfSy~~~--~~~--~~~~-~~~~a~d~~~fl~~f~~~~p~~~~~~-~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~ 166 (220)
.|-|-... ..+ +..+ ..-..+|+.+.+.+++++ +.-.+ ++|+|+|+||..+-.+|.+-.
T Consensus 83 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~l~G~S~Gg~ia~~~a~~~p---------- 149 (351)
T TIGR01392 83 GCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDH---LGIEQIAAVVGGSMGGMQALEWAIDYP---------- 149 (351)
T ss_pred CCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHH---cCCCCceEEEEECHHHHHHHHHHHHCh----------
Confidence 45442111 000 0000 011234444444455543 33345 999999999988877776522
Q ss_pred eeeeEEEEeccCC
Q 038976 167 INLKGFAIGNGLT 179 (220)
Q Consensus 167 inLkGi~igng~~ 179 (220)
-.++++++.++..
T Consensus 150 ~~v~~lvl~~~~~ 162 (351)
T TIGR01392 150 ERVRAIVVLATSA 162 (351)
T ss_pred HhhheEEEEccCC
Confidence 2467777776643
No 76
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.40 E-value=0.047 Score=48.81 Aligned_cols=108 Identities=22% Similarity=0.357 Sum_probs=59.9
Q ss_pred eEEEEEEEecCCC-CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeeccccccccc-----ceeEEeC------CC
Q 038976 26 KMFYFFFESRNSK-KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKAS-----NLLYVDQ------PT 93 (220)
Q Consensus 26 ~lFy~~~~s~~~~-~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~a-----nvlfiDq------P~ 93 (220)
..-||+|.....+ .+||||.|||+=|...... +-..|++.| =|+|-|+ |-
T Consensus 46 ~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~------------------~~sg~d~lAd~~gFlV~yPdg~~~~wn~~ 107 (312)
T COG3509 46 KRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQL------------------HGTGWDALADREGFLVAYPDGYDRAWNAN 107 (312)
T ss_pred ccceEEEcCCCCCCCCCEEEEEecCCCChHHhh------------------cccchhhhhcccCcEEECcCccccccCCC
Confidence 3458888766555 7799999999877665421 222455544 2445442 22
Q ss_pred CcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHH
Q 038976 94 GTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARV 155 (220)
Q Consensus 94 G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i 155 (220)
+.|-++..... ....+ -+..+.+.+.....+| -.....+||+|-|-||.++-.|+..-
T Consensus 108 ~~~~~~~p~~~--~~g~d-dVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~ 165 (312)
T COG3509 108 GCGNWFGPADR--RRGVD-DVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEY 165 (312)
T ss_pred cccccCCcccc--cCCcc-HHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcC
Confidence 34434322210 11111 1223333333333333 23445799999999999887777653
No 77
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=96.25 E-value=0.018 Score=49.69 Aligned_cols=123 Identities=17% Similarity=0.225 Sum_probs=78.3
Q ss_pred CceEEEEEEEecCCCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCC
Q 038976 24 DAKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDK 103 (220)
Q Consensus 24 ~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~ 103 (220)
...|-=|...+++ ++|++|++++--|--. .+.-+ . +-.=-+-..||+-+|- +|.|.|-+...
T Consensus 64 ~vtL~a~~~~~E~--S~pTlLyfh~NAGNmG---hr~~i------~------~~fy~~l~mnv~ivsY-RGYG~S~Gsps 125 (300)
T KOG4391|consen 64 KVTLDAYLMLSES--SRPTLLYFHANAGNMG---HRLPI------A------RVFYVNLKMNVLIVSY-RGYGKSEGSPS 125 (300)
T ss_pred ceeEeeeeecccC--CCceEEEEccCCCccc---chhhH------H------HHHHHHcCceEEEEEe-eccccCCCCcc
Confidence 3444444454432 8899999998655322 11100 0 0000022468899997 89999976542
Q ss_pred CcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCCh
Q 038976 104 RDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDP 181 (220)
Q Consensus 104 ~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp 181 (220)
+++..-|...+| .++-.+|...++++++.|.|-||..+-.+|.+-. -.+.++++-|-+++-
T Consensus 126 ------E~GL~lDs~avl-dyl~t~~~~dktkivlfGrSlGGAvai~lask~~----------~ri~~~ivENTF~SI 186 (300)
T KOG4391|consen 126 ------EEGLKLDSEAVL-DYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNS----------DRISAIIVENTFLSI 186 (300)
T ss_pred ------ccceeccHHHHH-HHHhcCccCCcceEEEEecccCCeeEEEeeccch----------hheeeeeeechhccc
Confidence 233333332333 5667789999999999999999998877775532 358889999988764
No 78
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=96.15 E-value=0.032 Score=47.83 Aligned_cols=46 Identities=17% Similarity=0.312 Sum_probs=31.5
Q ss_pred HHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccC
Q 038976 123 AFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGL 178 (220)
Q Consensus 123 ~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 178 (220)
+.+........+++|++|.|-||.....|+....+ .+.++++.+|.
T Consensus 86 ~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd----------~faa~a~~sG~ 131 (220)
T PF10503_consen 86 DYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPD----------LFAAVAVVSGV 131 (220)
T ss_pred HhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCc----------cceEEEeeccc
Confidence 44444345667789999999999888887766443 25566666554
No 79
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=95.98 E-value=0.026 Score=43.01 Aligned_cols=94 Identities=20% Similarity=0.269 Sum_probs=56.6
Q ss_pred EEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeeccccccc-ccceeEEeCCCCcccccccCCCcccccccchHHHHHHH
Q 038976 42 VVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDK-ASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDF 120 (220)
Q Consensus 42 l~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~-~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~f 120 (220)
+||++||+.+....+..+.+ .+.+ -.+++.+|.| +.|.+.. ....+++++.
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~-----------------~l~~~G~~v~~~~~~-~~~~~~~----------~~~~~~~~~~ 52 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAE-----------------ALAEQGYAVVAFDYP-GHGDSDG----------ADAVERVLAD 52 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHH-----------------HHHHTTEEEEEESCT-TSTTSHH----------SHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHH-----------------HHHHCCCEEEEEecC-CCCccch----------hHHHHHHHHH
Confidence 58899999876655433322 1222 2567888875 6655411 1122233322
Q ss_pred HHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 121 LQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 121 l~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
+. ++.+ ..++++++|+|.||..+..++.+- ..+++++.-+|+.
T Consensus 53 ~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~-----------~~v~~~v~~~~~~ 95 (145)
T PF12695_consen 53 IR---AGYP--DPDRIILIGHSMGGAIAANLAARN-----------PRVKAVVLLSPYP 95 (145)
T ss_dssp HH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS-----------TTESEEEEESESS
T ss_pred HH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc-----------cceeEEEEecCcc
Confidence 21 3223 556899999999999887777632 2477888888854
No 80
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=95.57 E-value=0.094 Score=49.15 Aligned_cols=34 Identities=18% Similarity=0.195 Sum_probs=21.1
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHH
Q 038976 118 YDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFA 152 (220)
Q Consensus 118 ~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la 152 (220)
++++++-...|. -..+++.|+|+|.||+-+-.++
T Consensus 161 l~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 161 LKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHh
Confidence 334444444332 2455799999999998665443
No 81
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.52 E-value=0.088 Score=47.53 Aligned_cols=65 Identities=22% Similarity=0.302 Sum_probs=44.3
Q ss_pred cceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHc
Q 038976 84 SNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHN 157 (220)
Q Consensus 84 anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~ 157 (220)
.-++=||=| |-|+|-..+. ...=.+.+..+.++.|..+ +...+++|+|+||||..+-.+|....+
T Consensus 87 ~~v~aiDl~-G~g~~s~~~~-----~~~y~~~~~v~~i~~~~~~---~~~~~~~lvghS~Gg~va~~~Aa~~P~ 151 (326)
T KOG1454|consen 87 LRVLAIDLP-GHGYSSPLPR-----GPLYTLRELVELIRRFVKE---VFVEPVSLVGHSLGGIVALKAAAYYPE 151 (326)
T ss_pred eEEEEEecC-CCCcCCCCCC-----CCceehhHHHHHHHHHHHh---hcCcceEEEEeCcHHHHHHHHHHhCcc
Confidence 457889986 7664322211 1113455666777777774 456679999999999999888888554
No 82
>PRK11460 putative hydrolase; Provisional
Probab=95.51 E-value=0.12 Score=43.96 Aligned_cols=37 Identities=5% Similarity=0.028 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHH
Q 038976 117 LYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 117 ~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~ 154 (220)
+.++++....+ .....++++|+|.|.||..+-.++.+
T Consensus 87 l~~~i~~~~~~-~~~~~~~i~l~GfS~Gg~~al~~a~~ 123 (232)
T PRK11460 87 FIETVRYWQQQ-SGVGASATALIGFSQGAIMALEAVKA 123 (232)
T ss_pred HHHHHHHHHHh-cCCChhhEEEEEECHHHHHHHHHHHh
Confidence 34444333333 23445679999999999988766643
No 83
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=95.50 E-value=0.028 Score=46.12 Aligned_cols=91 Identities=15% Similarity=0.184 Sum_probs=58.5
Q ss_pred cchHHHHHHHHHHHHHHC---CCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCCh-hcccc
Q 038976 111 NGVSNDLYDFLQAFFEEH---PKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDP-GVQYK 186 (220)
Q Consensus 111 ~~~a~d~~~fl~~f~~~~---p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp-~~q~~ 186 (220)
....+|+.+++ +|+.++ -.+..++++|+|+|-||+.+-.++..+.+.. ...++++++..|++|. .....
T Consensus 46 p~~~~D~~~a~-~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~------~~~~~~~~~~~p~~d~~~~~~~ 118 (211)
T PF07859_consen 46 PAALEDVKAAY-RWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRG------LPKPKGIILISPWTDLQDFDGP 118 (211)
T ss_dssp THHHHHHHHHH-HHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTT------TCHESEEEEESCHSSTSTSSCH
T ss_pred cccccccccce-eeeccccccccccccceEEeecccccchhhhhhhhhhhhc------ccchhhhhcccccccchhcccc
Confidence 44567777766 444443 1355668999999999999999998887653 1349999999999887 33223
Q ss_pred chh--HHHHhCCCCCHHHHHHHHh
Q 038976 187 AYP--DYALDMGIINKSQYNRISK 208 (220)
Q Consensus 187 ~~~--~~~~~~gli~~~~~~~~~~ 208 (220)
++. .-....-+++....+.+.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~ 142 (211)
T PF07859_consen 119 SYDDSNENKDDPFLPAPKIDWFWK 142 (211)
T ss_dssp HHHHHHHHSTTSSSBHHHHHHHHH
T ss_pred cccccccccccccccccccccccc
Confidence 331 1112234566665554443
No 84
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=95.49 E-value=0.13 Score=45.03 Aligned_cols=116 Identities=13% Similarity=0.220 Sum_probs=69.2
Q ss_pred CCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCC-----CcccccccchH
Q 038976 40 DPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDK-----RDIRHNENGVS 114 (220)
Q Consensus 40 ~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~-----~~~~~~~~~~a 114 (220)
+++++|+-|=||...-+--|.+. |..+ .+....|+=+.. .|++..... +.-..+.++..
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~----------L~~~---l~~~~~i~~ish---~Gh~~~~~~~~~~~~~~~~sL~~QI 65 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSA----------LYEK---LNPQFEILGISH---AGHSTSPSNSKFSPNGRLFSLQDQI 65 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHH----------HHHh---CCCCCeeEEecC---CCCcCCcccccccCCCCccCHHHHH
Confidence 57999999999998876444321 0000 023344444443 455554333 11224556666
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 115 NDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 115 ~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
+.-.+||+++....+ ....+++|+|||-|+..+-.+.+++. ....+++++++-=|.+
T Consensus 66 ~hk~~~i~~~~~~~~-~~~~~liLiGHSIGayi~levl~r~~-------~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 66 EHKIDFIKELIPQKN-KPNVKLILIGHSIGAYIALEVLKRLP-------DLKFRVKKVILLFPTI 122 (266)
T ss_pred HHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHHHHHHHHHhcc-------ccCCceeEEEEeCCcc
Confidence 777888888877543 24568999999998665554544443 1235677777666665
No 85
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=95.45 E-value=0.013 Score=54.54 Aligned_cols=79 Identities=22% Similarity=0.242 Sum_probs=51.4
Q ss_pred cceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCC
Q 038976 84 SNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKE 163 (220)
Q Consensus 84 anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~ 163 (220)
.++|=+|-| |+|+|.... ...+.+ .++..+..|+...|+....++-++|-|.||.|++.+|..=.
T Consensus 219 iA~LtvDmP-G~G~s~~~~---l~~D~~----~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~------- 283 (411)
T PF06500_consen 219 IAMLTVDMP-GQGESPKWP---LTQDSS----RLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALED------- 283 (411)
T ss_dssp -EEEEE--T-TSGGGTTT----S-S-CC----HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTT-------
T ss_pred CEEEEEccC-CCcccccCC---CCcCHH----HHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcc-------
Confidence 479999998 999985322 111222 34555667888899998889999999999999999886421
Q ss_pred CceeeeeEEEEeccCCC
Q 038976 164 GIHINLKGFAIGNGLTD 180 (220)
Q Consensus 164 ~~~inLkGi~igng~~d 180 (220)
-.||+++.-.|.++
T Consensus 284 ---~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 284 ---PRLKAVVALGAPVH 297 (411)
T ss_dssp ---TT-SEEEEES---S
T ss_pred ---cceeeEeeeCchHh
Confidence 24888776555544
No 86
>PLN02872 triacylglycerol lipase
Probab=95.43 E-value=0.066 Score=49.63 Aligned_cols=95 Identities=16% Similarity=0.162 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccc-cccceeEEeCCCCcccccccCCCc------cccccc
Q 038976 39 KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWD-KASNLLYVDQPTGTGFSYTSDKRD------IRHNEN 111 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~-~~anvlfiDqP~G~GfSy~~~~~~------~~~~~~ 111 (220)
.+|.||.+||..+++..+.. ++|.+ . -.+-.. +-.+|.-.|. +|.|+|+...... ...+..
T Consensus 73 ~~~~Vll~HGl~~ss~~w~~---~~~~~-----s---la~~La~~GydV~l~n~-RG~~~s~gh~~~~~~~~~fw~~s~~ 140 (395)
T PLN02872 73 RGPPVLLQHGLFMAGDAWFL---NSPEQ-----S---LGFILADHGFDVWVGNV-RGTRWSYGHVTLSEKDKEFWDWSWQ 140 (395)
T ss_pred CCCeEEEeCcccccccceee---cCccc-----c---hHHHHHhCCCCcccccc-cccccccCCCCCCccchhccCCcHH
Confidence 57899999998777665421 12210 0 000011 1246777786 7999886532110 112334
Q ss_pred chH-HHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchh
Q 038976 112 GVS-NDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIP 149 (220)
Q Consensus 112 ~~a-~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp 149 (220)
+.+ .|+-++++..++. ..++++++|+|.||..+-
T Consensus 141 e~a~~Dl~a~id~i~~~----~~~~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 141 ELALYDLAEMIHYVYSI----TNSKIFIVGHSQGTIMSL 175 (395)
T ss_pred HHHHHHHHHHHHHHHhc----cCCceEEEEECHHHHHHH
Confidence 455 6888877666543 135899999999997553
No 87
>PRK11071 esterase YqiA; Provisional
Probab=94.96 E-value=0.081 Score=43.74 Aligned_cols=88 Identities=15% Similarity=0.230 Sum_probs=54.7
Q ss_pred CEEEEEcCCCChHHHhH--Hhh----hcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchH
Q 038976 41 PVVIWLTGGPGCSSELA--VFY----ENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVS 114 (220)
Q Consensus 41 Pl~lwlnGGPG~SS~~g--~~~----e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a 114 (220)
|.||++||-+|++..+- .+. +.+ ...+++.+|-| |.|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~------------------~~~~v~~~dl~-g~~------------------ 44 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHH------------------PDIEMIVPQLP-PYP------------------ 44 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhC------------------CCCeEEeCCCC-CCH------------------
Confidence 68999999887765432 111 111 12456778876 221
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCCh
Q 038976 115 NDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDP 181 (220)
Q Consensus 115 ~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp 181 (220)
++..+++.++.++ +..++++|+|+|.||.++-.+|.+.. .+ +++.||..+|
T Consensus 45 ~~~~~~l~~l~~~---~~~~~~~lvG~S~Gg~~a~~~a~~~~------------~~-~vl~~~~~~~ 95 (190)
T PRK11071 45 ADAAELLESLVLE---HGGDPLGLVGSSLGGYYATWLSQCFM------------LP-AVVVNPAVRP 95 (190)
T ss_pred HHHHHHHHHHHHH---cCCCCeEEEEECHHHHHHHHHHHHcC------------CC-EEEECCCCCH
Confidence 1334455555554 33458999999999999888886532 12 3566777776
No 88
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=94.79 E-value=0.049 Score=47.23 Aligned_cols=83 Identities=25% Similarity=0.200 Sum_probs=57.4
Q ss_pred cceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCC
Q 038976 84 SNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKE 163 (220)
Q Consensus 84 anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~ 163 (220)
..+|.+|. +|+|-|-+.-... ..+-++|.++.| +|+.+.|-- +-++-++|.||+|.....+|..-
T Consensus 58 Y~vV~~D~-RG~g~S~G~~~~~----~~~e~~D~~d~I-~W~~~Qpws-~G~VGm~G~SY~G~~q~~~A~~~-------- 122 (272)
T PF02129_consen 58 YAVVVQDV-RGTGGSEGEFDPM----SPNEAQDGYDTI-EWIAAQPWS-NGKVGMYGISYGGFTQWAAAARR-------- 122 (272)
T ss_dssp -EEEEEE--TTSTTS-S-B-TT----SHHHHHHHHHHH-HHHHHCTTE-EEEEEEEEETHHHHHHHHHHTTT--------
T ss_pred CEEEEECC-cccccCCCccccC----ChhHHHHHHHHH-HHHHhCCCC-CCeEEeeccCHHHHHHHHHHhcC--------
Confidence 36889995 9999997654321 444677888777 888887544 44799999999999887776521
Q ss_pred CceeeeeEEEEeccCCChhc
Q 038976 164 GIHINLKGFAIGNGLTDPGV 183 (220)
Q Consensus 164 ~~~inLkGi~igng~~dp~~ 183 (220)
.-.||.|+...++.|...
T Consensus 123 --~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 123 --PPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp ---TTEEEEEEESE-SBTCC
T ss_pred --CCCceEEEecccCCcccc
Confidence 245999999888887654
No 89
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=94.73 E-value=0.69 Score=40.68 Aligned_cols=73 Identities=18% Similarity=0.191 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHHHHHCCCC--CCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChhccccchhH
Q 038976 113 VSNDLYDFLQAFFEEHPKL--AENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGVQYKAYPD 190 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~p~~--~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~~q~~~~~~ 190 (220)
..+|.+..++-..+.-.++ ..+++.++|+|-||+.+-.++....+.. ....++.++..|++|......++..
T Consensus 129 ~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~~~~~~~~ 202 (312)
T COG0657 129 ALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTSSAASLPG 202 (312)
T ss_pred hHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcccccchhh
Confidence 4456555553333222233 3567999999999999999999987652 2457888899999998763333433
Q ss_pred H
Q 038976 191 Y 191 (220)
Q Consensus 191 ~ 191 (220)
+
T Consensus 203 ~ 203 (312)
T COG0657 203 Y 203 (312)
T ss_pred c
Confidence 3
No 90
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=94.71 E-value=0.21 Score=50.32 Aligned_cols=98 Identities=19% Similarity=0.178 Sum_probs=57.9
Q ss_pred CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccc-cccceeEEeCCCCccccccc-C--------CCc--c
Q 038976 39 KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWD-KASNLLYVDQPTGTGFSYTS-D--------KRD--I 106 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~-~~anvlfiDqP~G~GfSy~~-~--------~~~--~ 106 (220)
..|+|+++||=.|....+-.+.+ .+. +-..++-+|.| |.|-|... . ... +
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~-----------------~La~~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~y 509 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAG-----------------TLAAAGVATIAIDHP-LHGARSFDANASGVNATNANVLAY 509 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHH-----------------HHHhCCcEEEEeCCC-CCCccccccccccccccccCccce
Confidence 45799999997666654432221 011 12357788875 88877222 1 110 1
Q ss_pred ---------cccccchHHHHHHHHHHHH------H---HCCCCCCCCEEEEeecCcccchhHHHHH
Q 038976 107 ---------RHNENGVSNDLYDFLQAFF------E---EHPKLAENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 107 ---------~~~~~~~a~d~~~fl~~f~------~---~~p~~~~~~~yi~GeSYgG~yvp~la~~ 154 (220)
+.+..+.+.|++......- + .+..+...+++++|||.||..+..++..
T Consensus 510 ~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 510 MNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred eccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 1244666777765443322 1 1233556799999999999999888754
No 91
>PLN02454 triacylglycerol lipase
Probab=94.55 E-value=0.092 Score=49.03 Aligned_cols=65 Identities=14% Similarity=0.197 Sum_probs=49.2
Q ss_pred chHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 112 GVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 112 ~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
.+.+++...|++..+++|..+. .++++|||.||..+-..|..|...... ...++++.+..|.|-+
T Consensus 207 S~r~qvl~~V~~l~~~Yp~~~~-sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRV 271 (414)
T PLN02454 207 SARSQLLAKIKELLERYKDEKL-SIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQV 271 (414)
T ss_pred HHHHHHHHHHHHHHHhCCCCCc-eEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcc
Confidence 4667888999998888887643 599999999999999988888764221 1235677788887765
No 92
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=94.39 E-value=0.59 Score=43.65 Aligned_cols=107 Identities=21% Similarity=0.316 Sum_probs=69.1
Q ss_pred CCCEEEEEcCCCChHHH------hHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccc
Q 038976 39 KDPVVIWLTGGPGCSSE------LAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENG 112 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~SS~------~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~ 112 (220)
++|++|.+.|=.|.|.- ....++.| ++ ++-.. ++|.|-|--++..-+ ...
T Consensus 124 ~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r-------------------~VVfN-~RG~~g~~LtTpr~f---~ag 179 (409)
T KOG1838|consen 124 TDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YR-------------------VVVFN-HRGLGGSKLTTPRLF---TAG 179 (409)
T ss_pred CCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cE-------------------EEEEC-CCCCCCCccCCCcee---ecC
Confidence 78999999998887753 13334556 44 22222 589888865544322 122
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 113 VSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
-.+|+.++++---++|| .+++|.+|.|+||.. +.+++-+..++ . -=..|++|-|||-
T Consensus 180 ~t~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~i---L~nYLGE~g~~---~-~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 180 WTEDLREVVNHIKKRYP---QAPLFAVGFSMGGNI---LTNYLGEEGDN---T-PLIAAVAVCNPWD 236 (409)
T ss_pred CHHHHHHHHHHHHHhCC---CCceEEEEecchHHH---HHHHhhhccCC---C-CceeEEEEeccch
Confidence 34688777755555666 458999999999985 46666554321 1 2367888999985
No 93
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=94.13 E-value=0.11 Score=39.81 Aligned_cols=62 Identities=23% Similarity=0.347 Sum_probs=45.3
Q ss_pred chHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 112 GVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 112 ~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
...+.+.+.|++..+++| ..++.|+|||-||-.+..+|..+.++... ...+++-+..|.|-+
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~---~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPS---SSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTT---STTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccc---cccceeeeecCCccc
Confidence 344566777777777776 35799999999999999999999876432 136788888888766
No 94
>COG0400 Predicted esterase [General function prediction only]
Probab=93.86 E-value=0.28 Score=41.60 Aligned_cols=41 Identities=17% Similarity=0.257 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHH
Q 038976 113 VSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~ 154 (220)
.++.+.+||....+++ ....+++++.|-|=|+.++-.+...
T Consensus 79 ~~~~~~~~l~~~~~~~-gi~~~~ii~~GfSqGA~ial~~~l~ 119 (207)
T COG0400 79 ETEKLAEFLEELAEEY-GIDSSRIILIGFSQGANIALSLGLT 119 (207)
T ss_pred HHHHHHHHHHHHHHHh-CCChhheEEEecChHHHHHHHHHHh
Confidence 4455677777777665 3445689999999998877665544
No 95
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=93.81 E-value=0.12 Score=43.51 Aligned_cols=67 Identities=10% Similarity=0.184 Sum_probs=53.4
Q ss_pred cccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 107 RHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 107 ~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
.++.+++|.|+...++.+.++ ++.+++.|+|-|+|.-.+|.+..++.... +-+++++++..+-....
T Consensus 44 ~rtP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~------r~~v~~v~Ll~p~~~~d 110 (192)
T PF06057_consen 44 ERTPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAAL------RARVAQVVLLSPSTTAD 110 (192)
T ss_pred hCCHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHH------HhheeEEEEeccCCcce
Confidence 367889999999999888875 77889999999999999999999987643 23577777776654433
No 96
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=93.50 E-value=0.17 Score=42.65 Aligned_cols=59 Identities=15% Similarity=0.243 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 113 VSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
+.+++...+++..+++|. .+++++|||.||..+..+|..+.++. ...+++.+..|.|-+
T Consensus 110 ~~~~~~~~~~~~~~~~p~---~~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~v 168 (229)
T cd00519 110 LYNQVLPELKSALKQYPD---YKIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHHHhhCCC---ceEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCC
Confidence 344555666666666554 47999999999999998888887643 135688889998776
No 97
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=93.45 E-value=0.13 Score=42.88 Aligned_cols=54 Identities=24% Similarity=0.329 Sum_probs=38.2
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChhccccc
Q 038976 118 YDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGVQYKA 187 (220)
Q Consensus 118 ~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~~q~~~ 187 (220)
.+.+++.++. ...+.+.|+|.|.||.|+-.+|.+. +++. ++.||.+.|......
T Consensus 46 ~~~l~~~i~~---~~~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~~l~~ 99 (187)
T PF05728_consen 46 IAQLEQLIEE---LKPENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYELLQD 99 (187)
T ss_pred HHHHHHHHHh---CCCCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHHHHHH
Confidence 3444455554 3444599999999999999998764 2444 777999998765543
No 98
>PRK13604 luxD acyl transferase; Provisional
Probab=93.00 E-value=1.5 Score=39.46 Aligned_cols=121 Identities=12% Similarity=0.125 Sum_probs=71.8
Q ss_pred CCceEEEEEEEecCC-C-CCCEEEEEcCCCChHHH-hHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCC-cccc
Q 038976 23 HDAKMFYFFFESRNS-K-KDPVVIWLTGGPGCSSE-LAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTG-TGFS 98 (220)
Q Consensus 23 ~~~~lFy~~~~s~~~-~-~~Pl~lwlnGGPG~SS~-~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G-~GfS 98 (220)
.+..|.=|+....++ + ..|++|..+| .|+... +..+. .+=+.+=.++|-.|. +| .|-|
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~HG-f~~~~~~~~~~A----------------~~La~~G~~vLrfD~-rg~~GeS 79 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIASG-FARRMDHFAGLA----------------EYLSSNGFHVIRYDS-LHHVGLS 79 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeCC-CCCChHHHHHHH----------------HHHHHCCCEEEEecC-CCCCCCC
Confidence 456788888877532 3 6788888886 444321 11111 111233467888896 55 5888
Q ss_pred cccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccC
Q 038976 99 YTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGL 178 (220)
Q Consensus 99 y~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 178 (220)
-++-. +. +......|+..++ +|+++. ..+++.|.|+|.||..+...|.. .+++++++..|.
T Consensus 80 ~G~~~-~~--t~s~g~~Dl~aai-d~lk~~---~~~~I~LiG~SmGgava~~~A~~------------~~v~~lI~~sp~ 140 (307)
T PRK13604 80 SGTID-EF--TMSIGKNSLLTVV-DWLNTR---GINNLGLIAASLSARIAYEVINE------------IDLSFLITAVGV 140 (307)
T ss_pred CCccc-cC--cccccHHHHHHHH-HHHHhc---CCCceEEEEECHHHHHHHHHhcC------------CCCCEEEEcCCc
Confidence 43221 11 1122356775555 666653 23579999999999875333321 247888888888
Q ss_pred CC
Q 038976 179 TD 180 (220)
Q Consensus 179 ~d 180 (220)
.+
T Consensus 141 ~~ 142 (307)
T PRK13604 141 VN 142 (307)
T ss_pred cc
Confidence 87
No 99
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=92.80 E-value=0.42 Score=48.07 Aligned_cols=83 Identities=16% Similarity=0.175 Sum_probs=55.0
Q ss_pred ccceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCC--------------CCCCCCEEEEeecCcccch
Q 038976 83 ASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHP--------------KLAENDFYITGESYAGHYI 148 (220)
Q Consensus 83 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p--------------~~~~~~~yi~GeSYgG~yv 148 (220)
=..+|++|. +|+|-|-+.... -..+-.+|..+.| +|+.... .+.+.++-++|.||+|...
T Consensus 279 GYaVV~~D~-RGtg~SeG~~~~----~~~~E~~D~~~vI-eWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~ 352 (767)
T PRK05371 279 GFAVVYVSG-IGTRGSDGCPTT----GDYQEIESMKAVI-DWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLP 352 (767)
T ss_pred CeEEEEEcC-CCCCCCCCcCcc----CCHHHHHHHHHHH-HHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHH
Confidence 458999996 899998764321 1123445665555 5776421 2334589999999999877
Q ss_pred hHHHHHHHccccCCCCceeeeeEEEEeccCCCh
Q 038976 149 PAFAARVHNGNKAKEGIHINLKGFAIGNGLTDP 181 (220)
Q Consensus 149 p~la~~i~~~n~~~~~~~inLkGi~igng~~dp 181 (220)
-.+|..- .-.||.|+-..|+.|.
T Consensus 353 ~~aAa~~----------pp~LkAIVp~a~is~~ 375 (767)
T PRK05371 353 NAVATTG----------VEGLETIIPEAAISSW 375 (767)
T ss_pred HHHHhhC----------CCcceEEEeeCCCCcH
Confidence 7666431 1358999988887763
No 100
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=92.71 E-value=0.42 Score=39.83 Aligned_cols=56 Identities=16% Similarity=0.183 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 115 NDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 115 ~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
+.+.+++.+..+. ....++++|.|-|-||..+-.++.+-. -.+.|++.-+|++-+.
T Consensus 88 ~~l~~li~~~~~~--~i~~~ri~l~GFSQGa~~al~~~l~~p----------~~~~gvv~lsG~~~~~ 143 (216)
T PF02230_consen 88 ERLDELIDEEVAY--GIDPSRIFLGGFSQGAAMALYLALRYP----------EPLAGVVALSGYLPPE 143 (216)
T ss_dssp HHHHHHHHHHHHT--T--GGGEEEEEETHHHHHHHHHHHCTS----------STSSEEEEES---TTG
T ss_pred HHHHHHHHHHHHc--CCChhheehhhhhhHHHHHHHHHHHcC----------cCcCEEEEeecccccc
Confidence 3444555444433 255668999999999987766664321 2578888888887443
No 101
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=92.66 E-value=0.21 Score=39.37 Aligned_cols=43 Identities=16% Similarity=0.262 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHcc
Q 038976 113 VSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNG 158 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~ 158 (220)
+.+.+...+++...++|. .+++|+|||.||..+-.+|.++.++
T Consensus 10 ~~~~i~~~~~~~~~~~p~---~~i~v~GHSlGg~lA~l~a~~~~~~ 52 (153)
T cd00741 10 LANLVLPLLKSALAQYPD---YKIHVTGHSLGGALAGLAGLDLRGR 52 (153)
T ss_pred HHHHHHHHHHHHHHHCCC---CeEEEEEcCHHHHHHHHHHHHHHhc
Confidence 445555556666555554 4799999999999999999998764
No 102
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.59 E-value=2.3 Score=37.38 Aligned_cols=106 Identities=15% Similarity=0.201 Sum_probs=65.0
Q ss_pred CCCEEEEEcCCCChH-HHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHH
Q 038976 39 KDPVVIWLTGGPGCS-SELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDL 117 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~S-S~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~ 117 (220)
..+++|+.+|=-.-- -+..+|.+.+- .=..|++=.|- .|.|.|-++..+ ....+|+
T Consensus 59 ~~~~lly~hGNa~Dlgq~~~~~~~l~~----------------~ln~nv~~~DY-SGyG~S~G~psE------~n~y~Di 115 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQMVELFKELSI----------------FLNCNVVSYDY-SGYGRSSGKPSE------RNLYADI 115 (258)
T ss_pred cceEEEEcCCcccchHHHHHHHHHHhh----------------cccceEEEEec-ccccccCCCccc------ccchhhH
Confidence 469999999851111 23444444321 12456777886 799999765432 2344454
Q ss_pred HHHHHHHHHHCCCC-CCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 118 YDFLQAFFEEHPKL-AENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 118 ~~fl~~f~~~~p~~-~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
-+ .-+|+++ ++ +..++.|+|.|.|..-.-.+|.+ ..+.|+++-+|+++-.
T Consensus 116 ~a-vye~Lr~--~~g~~~~Iil~G~SiGt~~tv~Lasr------------~~~~alVL~SPf~S~~ 166 (258)
T KOG1552|consen 116 KA-VYEWLRN--RYGSPERIILYGQSIGTVPTVDLASR------------YPLAAVVLHSPFTSGM 166 (258)
T ss_pred HH-HHHHHHh--hcCCCceEEEEEecCCchhhhhHhhc------------CCcceEEEeccchhhh
Confidence 33 3356565 45 57789999999997642233322 1289999999998744
No 103
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.22 E-value=0.92 Score=39.99 Aligned_cols=113 Identities=15% Similarity=0.248 Sum_probs=54.8
Q ss_pred ceEEEEEEEecC-CCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCC
Q 038976 25 AKMFYFFFESRN-SKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDK 103 (220)
Q Consensus 25 ~~lFy~~~~s~~-~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~ 103 (220)
.+.|-|-.--.. ..++|+++|+-|-||-+..+ +|.|--... .+-.+---|+ ..++=..+.|. |-....
T Consensus 13 ~si~~~~~~v~~~~~~~~li~~IpGNPG~~gFY---~~F~~~L~~---~l~~r~~~wt-Ish~~H~~~P~----sl~~~~ 81 (301)
T KOG3975|consen 13 TSILTLKPWVTKSGEDKPLIVWIPGNPGLLGFY---TEFARHLHL---NLIDRLPVWT-ISHAGHALMPA----SLREDH 81 (301)
T ss_pred ccceeeeeeeccCCCCceEEEEecCCCCchhHH---HHHHHHHHH---hcccccceeE-EeccccccCCc----cccccc
Confidence 344444333322 24899999999999987654 332210000 0000000121 12222334441 111111
Q ss_pred Cc---ccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHH
Q 038976 104 RD---IRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAA 153 (220)
Q Consensus 104 ~~---~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~ 153 (220)
+. -..+.++..+.=.+|+++++.+ .+++||+|||-|.-.+-.+-.
T Consensus 82 s~~~~eifsL~~QV~HKlaFik~~~Pk-----~~ki~iiGHSiGaYm~Lqil~ 129 (301)
T KOG3975|consen 82 SHTNEEIFSLQDQVDHKLAFIKEYVPK-----DRKIYIIGHSIGAYMVLQILP 129 (301)
T ss_pred ccccccccchhhHHHHHHHHHHHhCCC-----CCEEEEEecchhHHHHHHHhh
Confidence 10 1123444455556777666543 678999999998655544433
No 104
>PLN02571 triacylglycerol lipase
Probab=92.05 E-value=0.47 Score=44.40 Aligned_cols=67 Identities=9% Similarity=0.086 Sum_probs=47.8
Q ss_pred chHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccC----CCCceeeeeEEEEeccCC
Q 038976 112 GVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKA----KEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 112 ~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~----~~~~~inLkGi~igng~~ 179 (220)
.+.+++...|+++++++|... .+++++|||.||..+-..|..|....-. .....+++..+..|.|-+
T Consensus 205 Sar~qvl~eV~~L~~~y~~e~-~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRV 275 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDEE-ISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRV 275 (413)
T ss_pred hHHHHHHHHHHHHHHhcCccc-ccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCc
Confidence 455778888888888877652 3699999999999999888888653111 111235577778887766
No 105
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=92.04 E-value=0.42 Score=41.10 Aligned_cols=57 Identities=11% Similarity=0.131 Sum_probs=40.2
Q ss_pred CcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHH
Q 038976 94 GTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVH 156 (220)
Q Consensus 94 G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~ 156 (220)
-+||-++.. ..+.+++..++.++++--|+.+|.-+ .+.+.|||-|.|.+.....++.
T Consensus 102 svgY~l~~q----~htL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r 158 (270)
T KOG4627|consen 102 SVGYNLCPQ----VHTLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQR 158 (270)
T ss_pred EeccCcCcc----cccHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhc
Confidence 455555543 24678888899888866666665443 4889999999988776666643
No 106
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=91.61 E-value=1.6 Score=45.56 Aligned_cols=91 Identities=15% Similarity=0.221 Sum_probs=58.8
Q ss_pred CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHHH
Q 038976 39 KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLY 118 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~ 118 (220)
+.|.+++++|..|.+..+..+.. ...+...++-+|.| |.|-+ . . ...+.++.++++.
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~-----------------~l~~~~~v~~~~~~-g~~~~--~-~--~~~~l~~la~~~~ 1123 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSR-----------------YLDPQWSIYGIQSP-RPDGP--M-Q--TATSLDEVCEAHL 1123 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHH-----------------hcCCCCcEEEEECC-CCCCC--C-C--CCCCHHHHHHHHH
Confidence 34668889999887766543331 11233567778876 55533 1 1 1235566777776
Q ss_pred HHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHcc
Q 038976 119 DFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNG 158 (220)
Q Consensus 119 ~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~ 158 (220)
..++.. .+ ..++.++|+|+||..+-.+|.++.++
T Consensus 1124 ~~i~~~---~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~ 1157 (1296)
T PRK10252 1124 ATLLEQ---QP---HGPYHLLGYSLGGTLAQGIAARLRAR 1157 (1296)
T ss_pred HHHHhh---CC---CCCEEEEEechhhHHHHHHHHHHHHc
Confidence 666432 11 34899999999999999999888654
No 107
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=91.51 E-value=2.1 Score=39.57 Aligned_cols=41 Identities=15% Similarity=0.198 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEE-EEeecCcccchhHHHHHHH
Q 038976 113 VSNDLYDFLQAFFEEHPKLAENDFY-ITGESYAGHYIPAFAARVH 156 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~p~~~~~~~y-i~GeSYgG~yvp~la~~i~ 156 (220)
..+|+.+.+.+++++ +.-+++. ++|+|+||..+-.+|.+-.
T Consensus 142 t~~d~~~~~~~ll~~---lgi~~~~~vvG~SmGG~ial~~a~~~P 183 (389)
T PRK06765 142 TILDFVRVQKELIKS---LGIARLHAVMGPSMGGMQAQEWAVHYP 183 (389)
T ss_pred cHHHHHHHHHHHHHH---cCCCCceEEEEECHHHHHHHHHHHHCh
Confidence 345555556666654 4445676 9999999998888887644
No 108
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=91.18 E-value=0.59 Score=46.05 Aligned_cols=113 Identities=22% Similarity=0.233 Sum_probs=62.9
Q ss_pred CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeeccccccccc----------ceeEEeCCCCcccccccCCCcccc
Q 038976 39 KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKAS----------NLLYVDQPTGTGFSYTSDKRDIRH 108 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~a----------nvlfiDqP~G~GfSy~~~~~~~~~ 108 (220)
.-|++|++-|||+. .|+.|.++|.+.. =|++||. +|+-----.-+.-+..
T Consensus 641 kYptvl~VYGGP~V-------------------QlVnnsfkgi~ylR~~~LaslGy~Vv~IDn-RGS~hRGlkFE~~ik~ 700 (867)
T KOG2281|consen 641 KYPTVLNVYGGPGV-------------------QLVNNSFKGIQYLRFCRLASLGYVVVFIDN-RGSAHRGLKFESHIKK 700 (867)
T ss_pred CCceEEEEcCCCce-------------------EEeeccccceehhhhhhhhhcceEEEEEcC-CCccccchhhHHHHhh
Confidence 68999999999985 2466777777643 3589997 6652110000111111
Q ss_pred cccc-hHHHHHHHHHHHHHHCCCCCC-CCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 109 NENG-VSNDLYDFLQAFFEEHPKLAE-NDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 109 ~~~~-~a~d~~~fl~~f~~~~p~~~~-~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
...+ -++|-++-||-.-++.- |.. ..+-|-|-||||...-+. |.+. +.| ++-.+-|.|.++..
T Consensus 701 kmGqVE~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGGYLSlm~---L~~~------P~I-frvAIAGapVT~W~ 765 (867)
T KOG2281|consen 701 KMGQVEVEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGGYLSLMG---LAQY------PNI-FRVAIAGAPVTDWR 765 (867)
T ss_pred ccCeeeehhhHHHHHHHHHhcC-cccchheeEeccccccHHHHHH---hhcC------cce-eeEEeccCcceeee
Confidence 1111 13455566633333322 332 358999999999644322 2221 112 66677788887654
No 109
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=91.18 E-value=2.9 Score=35.58 Aligned_cols=64 Identities=14% Similarity=0.124 Sum_probs=36.1
Q ss_pred hHHHHHHHHHHHHHHC--CCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEE-EeccCCChhc
Q 038976 113 VSNDLYDFLQAFFEEH--PKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFA-IGNGLTDPGV 183 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~--p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~-igng~~dp~~ 183 (220)
.++.+.+.++..++.+ ..-..+++.|+|||.||..+= .+....... .-++++|+ ++.|...+..
T Consensus 62 q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar-~~l~~~~~~------~~~v~~iitl~tPh~g~~~ 128 (225)
T PF07819_consen 62 QAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVAR-SALSLPNYD------PDSVKTIITLGTPHRGSPL 128 (225)
T ss_pred HHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHH-HHHhccccc------cccEEEEEEEcCCCCCccc
Confidence 3444555555555443 233567899999999996432 222222111 13466666 7878776553
No 110
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=90.87 E-value=0.64 Score=43.58 Aligned_cols=65 Identities=15% Similarity=0.227 Sum_probs=40.5
Q ss_pred ccceeEEeCCCCcccccccCCCcc-------cccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchh
Q 038976 83 ASNLLYVDQPTGTGFSYTSDKRDI-------RHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIP 149 (220)
Q Consensus 83 ~anvlfiDqP~G~GfSy~~~~~~~-------~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp 149 (220)
.|-|||++. +=-|-|-.-....+ --+.+|+-+|+.+.| .++++..--+..|+..+|-||||+...
T Consensus 111 ~AllVFaEH-RyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll-~~lK~~~~a~~~pvIafGGSYGGMLaA 182 (492)
T KOG2183|consen 111 KALLVFAEH-RYYGESLPFGSQSYKDARHLGYLTSEQALADFAELL-TFLKRDLSAEASPVIAFGGSYGGMLAA 182 (492)
T ss_pred CceEEEeeh-hccccCCCCcchhccChhhhccccHHHHHHHHHHHH-HHHhhccccccCcEEEecCchhhHHHH
Confidence 467889986 55555432211100 125567778887766 566665444556899999999995443
No 111
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=90.83 E-value=0.42 Score=41.03 Aligned_cols=67 Identities=10% Similarity=0.111 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChhc
Q 038976 113 VSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGV 183 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~~ 183 (220)
.+.++.+||+...+. -..++++|++||.|+..+-.....+...... ....-+|..|++.+|.+|...
T Consensus 75 s~~~l~~~L~~L~~~---~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~-~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 75 SGPALARFLRDLARA---PGIKRIHILAHSMGNRVLLEALRQLASEGER-PDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred HHHHHHHHHHHHHhc---cCCceEEEEEeCchHHHHHHHHHHHHhcccc-hhhHhhhheEEEECCCCCHHH
Confidence 445555555444332 2456899999999998887777776654321 111247899999999998753
No 112
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=90.74 E-value=0.087 Score=47.76 Aligned_cols=70 Identities=19% Similarity=0.263 Sum_probs=43.2
Q ss_pred ccceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHc
Q 038976 83 ASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHN 157 (220)
Q Consensus 83 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~ 157 (220)
..|||.||=-.++.-.|.. ...+...+++.+.+||+...... .+...+++|+|||.|+|.+-..++++..
T Consensus 104 d~NVI~VDWs~~a~~~Y~~----a~~n~~~vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 104 DYNVIVVDWSRGASNNYPQ----AVANTRLVGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp -EEEEEEE-HHHHSS-HHH----HHHHHHHHHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred CceEEEEcchhhccccccc----hhhhHHHHHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 5799999953333222211 11234456666777776655332 3445689999999999999988888876
No 113
>PRK04940 hypothetical protein; Provisional
Probab=90.57 E-value=0.42 Score=39.77 Aligned_cols=40 Identities=15% Similarity=0.098 Sum_probs=31.0
Q ss_pred CCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChhcccc
Q 038976 134 NDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGVQYK 186 (220)
Q Consensus 134 ~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~~q~~ 186 (220)
+++.|+|.|-||.|+..||.+-. ++. ++.||.+.|...+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g------------~~a-VLiNPAv~P~~~L~ 99 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG------------IRQ-VIFNPNLFPEENME 99 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC------------CCE-EEECCCCChHHHHH
Confidence 47999999999999999997743 343 46699999965433
No 114
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=90.38 E-value=0.68 Score=43.66 Aligned_cols=40 Identities=15% Similarity=0.244 Sum_probs=29.1
Q ss_pred chHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHH
Q 038976 112 GVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 112 ~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~ 154 (220)
...+++.+.+++.+++ ...+++.|+|||.||.++-.++..
T Consensus 143 ~~~~~Lk~lIe~~~~~---~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 143 ETMDGLKKKLETVYKA---SGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred HHHHHHHHHHHHHHHH---cCCCCEEEEEECHhHHHHHHHHHH
Confidence 3456677777777765 445789999999999877665543
No 115
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=90.34 E-value=3.3 Score=37.82 Aligned_cols=117 Identities=17% Similarity=0.268 Sum_probs=67.1
Q ss_pred EEEEEEEecCCCCCCEEEEEcCCCChHHH-h-----HHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccc
Q 038976 27 MFYFFFESRNSKKDPVVIWLTGGPGCSSE-L-----AVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYT 100 (220)
Q Consensus 27 lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~-~-----g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~ 100 (220)
.+.|. +...++..|++|-+||=-|.|.. + ..+.+-| ..++-.+- +|.+.+-.
T Consensus 63 ~ldw~-~~p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg--------------------~~~Vv~~~-Rgcs~~~n 120 (345)
T COG0429 63 DLDWS-EDPRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRG--------------------WLVVVFHF-RGCSGEAN 120 (345)
T ss_pred EEeec-cCccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcC--------------------CeEEEEec-ccccCCcc
Confidence 34443 33335578999999996665531 1 2222222 24555663 78876644
Q ss_pred cCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccC
Q 038976 101 SDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGL 178 (220)
Q Consensus 101 ~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 178 (220)
....-+ .....+|+..++ +++++ ++-.+|+|.+|-|.||. +||.++.+.- .+. ....++++-+|+
T Consensus 121 ~~p~~y---h~G~t~D~~~~l-~~l~~--~~~~r~~~avG~SLGgn---mLa~ylgeeg---~d~-~~~aa~~vs~P~ 185 (345)
T COG0429 121 TSPRLY---HSGETEDIRFFL-DWLKA--RFPPRPLYAVGFSLGGN---MLANYLGEEG---DDL-PLDAAVAVSAPF 185 (345)
T ss_pred cCccee---cccchhHHHHHH-HHHHH--hCCCCceEEEEecccHH---HHHHHHHhhc---cCc-ccceeeeeeCHH
Confidence 333222 122337887777 44443 34467999999999986 5677776542 222 225666666664
No 116
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=90.31 E-value=0.67 Score=43.19 Aligned_cols=60 Identities=18% Similarity=0.213 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHHHHHCCCCCC-CCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 113 VSNDLYDFLQAFFEEHPKLAE-NDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~p~~~~-~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
.|.|...+|..-.+.+|.++. .|+.+.|.|||| |...|+.+|. +-.+.||+=-+++.-|.
T Consensus 162 qAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a---------P~~~~~~iDns~~~~p~ 222 (403)
T PF11144_consen 162 QAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA---------PWLFDGVIDNSSYALPP 222 (403)
T ss_pred HHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC---------ccceeEEEecCccccch
Confidence 678888888888888999975 789999999986 5556666664 23456666555666554
No 117
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=89.95 E-value=2.4 Score=39.51 Aligned_cols=36 Identities=11% Similarity=0.085 Sum_probs=23.8
Q ss_pred CCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 134 NDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 134 ~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
+...|+|.|+||.-+-.+|.+-.+ .+.+++..+|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd----------~Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPE----------RFGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCcc----------cccEEEEeccce
Confidence 458999999999877666654322 355566655543
No 118
>COG4099 Predicted peptidase [General function prediction only]
Probab=89.88 E-value=6.9 Score=35.56 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=28.2
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHH
Q 038976 118 YDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVH 156 (220)
Q Consensus 118 ~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~ 156 (220)
.+.+.+-+..++.-..+.+|++|-|-||.-.=+++.+..
T Consensus 253 idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfP 291 (387)
T COG4099 253 IDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFP 291 (387)
T ss_pred HHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCc
Confidence 444554556667777778999999999987766665544
No 119
>PLN02719 triacylglycerol lipase
Probab=89.49 E-value=0.98 Score=43.33 Aligned_cols=69 Identities=17% Similarity=0.195 Sum_probs=48.6
Q ss_pred cchHHHHHHHHHHHHHHCCCCC--CCCEEEEeecCcccchhHHHHHHHccc--cCCCCceeeeeEEEEeccCC
Q 038976 111 NGVSNDLYDFLQAFFEEHPKLA--ENDFYITGESYAGHYIPAFAARVHNGN--KAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 111 ~~~a~d~~~fl~~f~~~~p~~~--~~~~yi~GeSYgG~yvp~la~~i~~~n--~~~~~~~inLkGi~igng~~ 179 (220)
..+.+++...|++..+++|... ...++|+|||.||..+...|..|.+.. +......+++.-+..|.|-+
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRV 345 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRV 345 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCc
Confidence 3466788888999888888652 346999999999999999998887632 11111234566677777655
No 120
>PLN02753 triacylglycerol lipase
Probab=89.06 E-value=1.1 Score=43.20 Aligned_cols=69 Identities=17% Similarity=0.207 Sum_probs=48.3
Q ss_pred cchHHHHHHHHHHHHHHCCC--CCCCCEEEEeecCcccchhHHHHHHHccc--cCCCCceeeeeEEEEeccCC
Q 038976 111 NGVSNDLYDFLQAFFEEHPK--LAENDFYITGESYAGHYIPAFAARVHNGN--KAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 111 ~~~a~d~~~fl~~f~~~~p~--~~~~~~yi~GeSYgG~yvp~la~~i~~~n--~~~~~~~inLkGi~igng~~ 179 (220)
..+.+++...|+..++++|. .....++|+|||.||..+...|..|.... .......+++.-+..|.|-+
T Consensus 287 ~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRV 359 (531)
T PLN02753 287 FSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRV 359 (531)
T ss_pred hhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCc
Confidence 44677888889998887753 22347999999999999999888886531 11112235566777777655
No 121
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=88.28 E-value=3.9 Score=39.07 Aligned_cols=18 Identities=22% Similarity=0.270 Sum_probs=14.0
Q ss_pred CCEEEEeecCcccchhHH
Q 038976 134 NDFYITGESYAGHYIPAF 151 (220)
Q Consensus 134 ~~~yi~GeSYgG~yvp~l 151 (220)
.++-|+|||-|++-+-.+
T Consensus 180 ~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 180 QNVTLFGESAGAASILTL 197 (491)
T ss_pred cceEEeeccchHHHHHHh
Confidence 359999999998766543
No 122
>PLN02324 triacylglycerol lipase
Probab=88.02 E-value=1.4 Score=41.20 Aligned_cols=68 Identities=18% Similarity=0.154 Sum_probs=46.5
Q ss_pred cchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccC-----CCCceeeeeEEEEeccCC
Q 038976 111 NGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKA-----KEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 111 ~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~-----~~~~~inLkGi~igng~~ 179 (220)
..+.+++...|++.++++|... ..++++|||.||..+...|..|.+.... .....+++.-+..|.|-+
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRV 265 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRI 265 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCc
Confidence 3466778888888888877542 3699999999999998888888653211 011234566666776655
No 123
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=87.69 E-value=2.3 Score=38.37 Aligned_cols=126 Identities=21% Similarity=0.254 Sum_probs=68.7
Q ss_pred CCCceEEEEEEEecCCC-CCCEEEEEcCCCChHHHh---HHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcc-
Q 038976 22 SHDAKMFYFFFESRNSK-KDPVVIWLTGGPGCSSEL---AVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTG- 96 (220)
Q Consensus 22 ~~~~~lFy~~~~s~~~~-~~Pl~lwlnGGPG~SS~~---g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~G- 96 (220)
..+..+.=|+...++.+ ..|.||.++|..|.+... ..+...|=. +|.+| ++|-|
T Consensus 64 ~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~--------------------vl~~d-~rGqg~ 122 (320)
T PF05448_consen 64 FDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGYA--------------------VLAMD-VRGQGG 122 (320)
T ss_dssp GGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT-E--------------------EEEE---TTTSS
T ss_pred cCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCeE--------------------EEEec-CCCCCC
Confidence 34556777777665334 889999999987764322 122333322 34455 24544
Q ss_pred cccccC------CCcc-cc---c-c-----cchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHcccc
Q 038976 97 FSYTSD------KRDI-RH---N-E-----NGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNK 160 (220)
Q Consensus 97 fSy~~~------~~~~-~~---~-~-----~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~ 160 (220)
.|-... ..+. .. + . ..+..|.+.++ .|+...|+...+++.++|+|-||...-.+|. +.+
T Consensus 123 ~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~--- 197 (320)
T PF05448_consen 123 RSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDP--- 197 (320)
T ss_dssp SS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSS---
T ss_pred CCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCc---
Confidence 111000 0000 00 0 1 12345666666 7778889998889999999999987766554 332
Q ss_pred CCCCceeeeeEEEEeccCCC
Q 038976 161 AKEGIHINLKGFAIGNGLTD 180 (220)
Q Consensus 161 ~~~~~~inLkGi~igng~~d 180 (220)
+++.++...|++.
T Consensus 198 -------rv~~~~~~vP~l~ 210 (320)
T PF05448_consen 198 -------RVKAAAADVPFLC 210 (320)
T ss_dssp -------T-SEEEEESESSS
T ss_pred -------cccEEEecCCCcc
Confidence 3778888878663
No 124
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=87.56 E-value=1.3 Score=40.49 Aligned_cols=60 Identities=17% Similarity=0.315 Sum_probs=40.8
Q ss_pred ccceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCC-CCCCCEEEEeecCcccchhH
Q 038976 83 ASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPK-LAENDFYITGESYAGHYIPA 150 (220)
Q Consensus 83 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~-~~~~~~yi~GeSYgG~yvp~ 150 (220)
.+|++...-| |+|+|.+.. +.++.+.|. +++.+|++.+++ -+.+++.+.|+|-||.....
T Consensus 171 ~aNvl~fNYp-GVg~S~G~~------s~~dLv~~~-~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 171 GANVLVFNYP-GVGSSTGPP------SRKDLVKDY-QACVRYLRDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred CCcEEEECCC-ccccCCCCC------CHHHHHHHH-HHHHHHHHhcccCCChheEEEeeccccHHHHHH
Confidence 4699999975 999995432 234455554 344466665433 35578999999999987554
No 125
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=86.63 E-value=4 Score=36.73 Aligned_cols=73 Identities=7% Similarity=0.152 Sum_probs=40.0
Q ss_pred cccchHHHHHHHHHHHHHHC-C-CCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChhcccc
Q 038976 109 NENGVSNDLYDFLQAFFEEH-P-KLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGVQYK 186 (220)
Q Consensus 109 ~~~~~a~d~~~fl~~f~~~~-p-~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~~q~~ 186 (220)
+.++-++|+..++ +|++.. . .+..+++.|+|||=|-.=+-.+..+ .+... ..-.++|+|+-.|..|.+....
T Consensus 82 SL~~D~~eI~~~v-~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~---~~~~~--~~~~VdG~ILQApVSDREa~~~ 155 (303)
T PF08538_consen 82 SLDRDVEEIAQLV-EYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSS---PNPSP--SRPPVDGAILQAPVSDREAILN 155 (303)
T ss_dssp -HHHHHHHHHHHH-HHHHHHS------S-EEEEEECCHHHHHHHHHHH----TT-----CCCEEEEEEEEE---TTSTTT
T ss_pred hhhhHHHHHHHHH-HHHHHhhccccCCccEEEEecCCCcHHHHHHHhc---cCccc--cccceEEEEEeCCCCChhHhhh
Confidence 3444566776666 455542 1 2456789999999998766544443 32211 1367999999999998775544
Q ss_pred c
Q 038976 187 A 187 (220)
Q Consensus 187 ~ 187 (220)
.
T Consensus 156 ~ 156 (303)
T PF08538_consen 156 F 156 (303)
T ss_dssp S
T ss_pred c
Confidence 3
No 126
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=86.00 E-value=1.9 Score=38.54 Aligned_cols=78 Identities=9% Similarity=0.012 Sum_probs=45.2
Q ss_pred cceeEEeCCCCcccccccCCCcccccccchH-HHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCC
Q 038976 84 SNLLYVDQPTGTGFSYTSDKRDIRHNENGVS-NDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAK 162 (220)
Q Consensus 84 anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a-~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~ 162 (220)
.+++-+|- .|.|.|-. ..+.+..+ +++..+++...++ ....+++++|+|+||..+..++..-.
T Consensus 95 ~~V~~~D~-~g~g~s~~------~~~~~d~~~~~~~~~v~~l~~~---~~~~~i~lvGhS~GG~i~~~~~~~~~------ 158 (350)
T TIGR01836 95 QDVYLIDW-GYPDRADR------YLTLDDYINGYIDKCVDYICRT---SKLDQISLLGICQGGTFSLCYAALYP------ 158 (350)
T ss_pred CeEEEEeC-CCCCHHHh------cCCHHHHHHHHHHHHHHHHHHH---hCCCcccEEEECHHHHHHHHHHHhCc------
Confidence 46788885 46555421 11222233 3354555444443 34568999999999987765554311
Q ss_pred CCceeeeeEEEEeccCCCh
Q 038976 163 EGIHINLKGFAIGNGLTDP 181 (220)
Q Consensus 163 ~~~~inLkGi~igng~~dp 181 (220)
-.++++++.++.+|.
T Consensus 159 ----~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 159 ----DKIKNLVTMVTPVDF 173 (350)
T ss_pred ----hheeeEEEecccccc
Confidence 136777777776653
No 127
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=85.75 E-value=0.67 Score=43.27 Aligned_cols=55 Identities=9% Similarity=0.104 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHC-CCCCCC--CEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEecc
Q 038976 114 SNDLYDFLQAFFEEH-PKLAEN--DFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNG 177 (220)
Q Consensus 114 a~d~~~fl~~f~~~~-p~~~~~--~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 177 (220)
-.|...+| +|.+++ ..|... ++-|+|||-||.-|-.+... ... . --++.+|+-+|
T Consensus 186 l~Dq~~AL-~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~s---p~~--~---~LF~raI~~SG 243 (535)
T PF00135_consen 186 LLDQRLAL-KWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLS---PSS--K---GLFHRAILQSG 243 (535)
T ss_dssp HHHHHHHH-HHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHG---GGG--T---TSBSEEEEES-
T ss_pred hhhhHHHH-HHHHhhhhhcccCCcceeeeeecccccccceeeec---ccc--c---ccccccccccc
Confidence 34555555 666542 356554 59999999998877655444 111 1 12667777676
No 128
>PLN02761 lipase class 3 family protein
Probab=85.11 E-value=2.6 Score=40.60 Aligned_cols=69 Identities=13% Similarity=0.086 Sum_probs=47.0
Q ss_pred cchHHHHHHHHHHHHHHCCCC-C--CCCEEEEeecCcccchhHHHHHHHccccC---CCCceeeeeEEEEeccCC
Q 038976 111 NGVSNDLYDFLQAFFEEHPKL-A--ENDFYITGESYAGHYIPAFAARVHNGNKA---KEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 111 ~~~a~d~~~fl~~f~~~~p~~-~--~~~~yi~GeSYgG~yvp~la~~i~~~n~~---~~~~~inLkGi~igng~~ 179 (220)
..+.+++...|+...+++|.. + .-.++++|||.||-.+-..|..|...+.. .....+++.-+..|.|-+
T Consensus 268 ~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRV 342 (527)
T PLN02761 268 FSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRV 342 (527)
T ss_pred hhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCc
Confidence 346678888888888877532 1 22599999999999999888888653211 012235566777776654
No 129
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=85.01 E-value=5.1 Score=28.45 Aligned_cols=77 Identities=21% Similarity=0.303 Sum_probs=46.9
Q ss_pred ceEEEEEEEecCCCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCC
Q 038976 25 AKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKR 104 (220)
Q Consensus 25 ~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~ 104 (220)
.+||+..+...+. .+.+|+.++|--..|.. +.+..... . .+-.+|+-+|+ +|.|.|-...
T Consensus 2 ~~L~~~~w~p~~~-~k~~v~i~HG~~eh~~r---y~~~a~~L-------~------~~G~~V~~~D~-rGhG~S~g~r-- 61 (79)
T PF12146_consen 2 TKLFYRRWKPENP-PKAVVVIVHGFGEHSGR---YAHLAEFL-------A------EQGYAVFAYDH-RGHGRSEGKR-- 61 (79)
T ss_pred cEEEEEEecCCCC-CCEEEEEeCCcHHHHHH---HHHHHHHH-------H------hCCCEEEEECC-CcCCCCCCcc--
Confidence 3577777776543 68899999986333332 33322111 1 12346888998 7999996432
Q ss_pred cccccccchHHHHHHHH
Q 038976 105 DIRHNENGVSNDLYDFL 121 (220)
Q Consensus 105 ~~~~~~~~~a~d~~~fl 121 (220)
....+.+...+|+..|+
T Consensus 62 g~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 62 GHIDSFDDYVDDLHQFI 78 (79)
T ss_pred cccCCHHHHHHHHHHHh
Confidence 23346677788887766
No 130
>PF03283 PAE: Pectinacetylesterase
Probab=84.78 E-value=10 Score=34.86 Aligned_cols=143 Identities=17% Similarity=0.091 Sum_probs=71.7
Q ss_pred EEEEEecCCCCCCEEEEEcCCCChHHHh----HHhhhcCCeEE-----cCCCc----eeecccccccccceeEEeCCCCc
Q 038976 29 YFFFESRNSKKDPVVIWLTGGPGCSSEL----AVFYENGPFSI-----ADNMS----LVWNEHGWDKASNLLYVDQPTGT 95 (220)
Q Consensus 29 y~~~~s~~~~~~Pl~lwlnGGPG~SS~~----g~~~e~GP~~i-----~~~~~----l~~n~~sW~~~anvlfiDqP~G~ 95 (220)
|++-+......+-+||+|.||=.|.+.. ...++.|...- ...+- -..||.= ...|+|||=- -+
T Consensus 39 yy~~~g~g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f--~~wN~V~vpY--C~ 114 (361)
T PF03283_consen 39 YYFRPGSGSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDF--YNWNHVFVPY--CD 114 (361)
T ss_pred EEEccCCCCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCcc--ccccEEEEEe--cC
Confidence 4444442223678999999998887742 11233443221 11122 2334421 2257888853 44
Q ss_pred ccccccCCCccc---ccccchHHHHHHHHHHHHHHCCCCC-CCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeE
Q 038976 96 GFSYTSDKRDIR---HNENGVSNDLYDFLQAFFEEHPKLA-ENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKG 171 (220)
Q Consensus 96 GfSy~~~~~~~~---~~~~~~a~d~~~fl~~f~~~~p~~~-~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkG 171 (220)
|=++.-...... .+..-....+++.+.+++... .+. ..++.|+|.|-||.=+..-+.+|.+.-.. ..++++
T Consensus 115 Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~-gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~----~~~v~~ 189 (361)
T PF03283_consen 115 GDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSN-GLPNAKQVLLTGCSAGGLGAILHADYVRDRLPS----SVKVKC 189 (361)
T ss_pred CccccCcccccccCCceeEeecHHHHHHHHHHHHHh-cCcccceEEEeccChHHHHHHHHHHHHHHHhcc----CceEEE
Confidence 444432211010 111112234444444554432 232 34699999999998888777777664321 245555
Q ss_pred EEEeccCCC
Q 038976 172 FAIGNGLTD 180 (220)
Q Consensus 172 i~igng~~d 180 (220)
+.=..-++|
T Consensus 190 ~~DsG~f~d 198 (361)
T PF03283_consen 190 LSDSGFFLD 198 (361)
T ss_pred ecccccccc
Confidence 554433444
No 131
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=84.37 E-value=4.1 Score=34.89 Aligned_cols=61 Identities=16% Similarity=0.082 Sum_probs=42.4
Q ss_pred cccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEecc
Q 038976 109 NENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNG 177 (220)
Q Consensus 109 ~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 177 (220)
+..+-++.+...++.+.. ..+++.|+|.|-|+..+-...+++.+..... .-+++-+++||+
T Consensus 28 Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~---~~~l~fVl~gnP 88 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPP---PDDLSFVLIGNP 88 (225)
T ss_pred HHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCC---cCceEEEEecCC
Confidence 334445566666765544 5778999999999998888888887643211 146778888877
No 132
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=84.28 E-value=1.8 Score=36.79 Aligned_cols=62 Identities=13% Similarity=0.188 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceee-eeEEEEeccCCC
Q 038976 113 VSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHIN-LKGFAIGNGLTD 180 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~in-LkGi~igng~~d 180 (220)
.-.|+..+.+.|++.+ -+.|||+|+|||=|+..+-.|-++..+.+.. +=+ +...+||-+...
T Consensus 76 ay~DV~~AF~~yL~~~--n~GRPfILaGHSQGs~~l~~LL~e~~~~~pl----~~rLVAAYliG~~v~~ 138 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANY--NNGRPFILAGHSQGSMHLLRLLKEEIAGDPL----RKRLVAAYLIGYPVTV 138 (207)
T ss_pred hHHHHHHHHHHHHHhc--CCCCCEEEEEeChHHHHHHHHHHHHhcCchH----HhhhheeeecCccccH
Confidence 4478889998999875 3578999999999998877776664443321 112 455566665443
No 133
>PLN02408 phospholipase A1
Probab=83.18 E-value=3.3 Score=38.25 Aligned_cols=63 Identities=11% Similarity=0.075 Sum_probs=44.2
Q ss_pred chHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 112 GVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 112 ~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
.+.+++.+.|++.++++|... ..++|+|||.||..+-..|..|...... . ..++-+..|.|-+
T Consensus 179 s~r~qVl~eI~~ll~~y~~~~-~sI~vTGHSLGGALAtLaA~dl~~~~~~--~--~~V~v~tFGsPRV 241 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDEP-LSLTITGHSLGAALATLTAYDIKTTFKR--A--PMVTVISFGGPRV 241 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCCC-ceEEEeccchHHHHHHHHHHHHHHhcCC--C--CceEEEEcCCCCc
Confidence 456677888888888887652 3699999999999999888888754211 0 1244555665544
No 134
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=83.06 E-value=3.3 Score=39.38 Aligned_cols=36 Identities=14% Similarity=0.252 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHH-CCCCCC--CCEEEEeecCcccchhHHH
Q 038976 116 DLYDFLQAFFEE-HPKLAE--NDFYITGESYAGHYIPAFA 152 (220)
Q Consensus 116 d~~~fl~~f~~~-~p~~~~--~~~yi~GeSYgG~yvp~la 152 (220)
|...+| +|.++ -+.|.. +++-|+|||.||..|-.+.
T Consensus 175 Dq~~AL-~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 175 DQLLAL-RWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHH-HHHHHHHHhcCCCCCeEEEEeechhHHHHHHHh
Confidence 555555 44443 244543 4699999999998886543
No 135
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=82.19 E-value=2.3 Score=35.73 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=29.0
Q ss_pred HHHHHCCCCCCCCEEEEeecCcccchhHHHHHHH
Q 038976 123 AFFEEHPKLAENDFYITGESYAGHYIPAFAARVH 156 (220)
Q Consensus 123 ~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~ 156 (220)
+|++++|+...+++-|+|-|.||-.+-.+|.+..
T Consensus 11 ~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~ 44 (213)
T PF08840_consen 11 DWLKSHPEVDPDKIGIIGISKGAELALLLASRFP 44 (213)
T ss_dssp HHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS
T ss_pred HHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC
Confidence 7889999999889999999999999988888765
No 136
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=81.83 E-value=3.1 Score=37.70 Aligned_cols=58 Identities=19% Similarity=0.249 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 116 DLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 116 d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
.+.+-++.....+|++ .++++|||-||.++...|..|...... ...+++-+--|-|-+
T Consensus 156 ~~~~~~~~L~~~~~~~---~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PRv 213 (336)
T KOG4569|consen 156 GLDAELRRLIELYPNY---SIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPRV 213 (336)
T ss_pred HHHHHHHHHHHhcCCc---EEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCCc
Confidence 3444455555666744 799999999999999999999876532 224566666776644
No 137
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=81.77 E-value=7.6 Score=30.59 Aligned_cols=64 Identities=17% Similarity=0.234 Sum_probs=39.2
Q ss_pred ccceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHcc
Q 038976 83 ASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNG 158 (220)
Q Consensus 83 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~ 158 (220)
...++-+|.| |.|.+-. ...+.+..+++....++ .. ....++.++|+|+||..+-.+|.++.++
T Consensus 25 ~~~v~~~~~~-g~~~~~~-----~~~~~~~~~~~~~~~l~---~~---~~~~~~~l~g~s~Gg~~a~~~a~~l~~~ 88 (212)
T smart00824 25 RRDVSALPLP-GFGPGEP-----LPASADALVEAQAEAVL---RA---AGGRPFVLVGHSSGGLLAHAVAARLEAR 88 (212)
T ss_pred CccEEEecCC-CCCCCCC-----CCCCHHHHHHHHHHHHH---Hh---cCCCCeEEEEECHHHHHHHHHHHHHHhC
Confidence 4578888875 6554321 11223333444333332 22 2245899999999999999999888754
No 138
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=80.72 E-value=2.6 Score=35.51 Aligned_cols=47 Identities=11% Similarity=0.094 Sum_probs=32.6
Q ss_pred cchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHcc
Q 038976 111 NGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNG 158 (220)
Q Consensus 111 ~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~ 158 (220)
+..++.+.+.|.+..+..+.- .+++.++|||.||.++=.....+.+.
T Consensus 56 ~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~ 102 (217)
T PF05057_consen 56 DVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDK 102 (217)
T ss_pred HHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhc
Confidence 445666777776776654333 46899999999999986655555544
No 139
>PLN02802 triacylglycerol lipase
Probab=80.71 E-value=3.7 Score=39.44 Aligned_cols=63 Identities=14% Similarity=0.120 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 112 GVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 112 ~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
.+.+++..-|+++++++|.-. ..++|+|||.||-.+-..|..|...... .+.+.-+..|.|-+
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e~-~sI~VTGHSLGGALAtLaA~dL~~~~~~----~~pV~vyTFGsPRV 371 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGEE-LSITVTGHSLGAALALLVADELATCVPA----APPVAVFSFGGPRV 371 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCCc-ceEEEeccchHHHHHHHHHHHHHHhCCC----CCceEEEEcCCCCc
Confidence 456677888888888765432 3699999999999999888888754321 12344555565533
No 140
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=80.39 E-value=3.7 Score=36.62 Aligned_cols=35 Identities=20% Similarity=0.355 Sum_probs=27.5
Q ss_pred chHHHHHHHHHHHHHHCCCCCCCCEEEEeecCccc
Q 038976 112 GVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGH 146 (220)
Q Consensus 112 ~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~ 146 (220)
+++..+.+.+.......|+=..-++|+.|||-|..
T Consensus 87 ~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 87 EAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred HHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 35566788888888888887766799999998754
No 141
>PLN02310 triacylglycerol lipase
Probab=80.21 E-value=4.3 Score=37.95 Aligned_cols=62 Identities=13% Similarity=0.067 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHHCCCC-CCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 113 VSNDLYDFLQAFFEEHPKL-AENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~p~~-~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
+.+++...+++..+.+++- ...++.|+|||.||-.+-..|..|.... ..+++.-+..|.|-+
T Consensus 187 a~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~-----~~~~v~vyTFGsPRV 249 (405)
T PLN02310 187 ASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTI-----PDLFVSVISFGAPRV 249 (405)
T ss_pred HHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhC-----cCcceeEEEecCCCc
Confidence 4566777777777665432 2236999999999999988887776432 124455566666654
No 142
>PLN02847 triacylglycerol lipase
Probab=80.05 E-value=3.9 Score=40.10 Aligned_cols=61 Identities=11% Similarity=0.089 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEec-cCCChh
Q 038976 114 SNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGN-GLTDPG 182 (220)
Q Consensus 114 a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~ign-g~~dp~ 182 (220)
.+.+...|++-+.++|.| ++.|+|||.||-.+..++..+.++.. .-+++.+..|- |+++..
T Consensus 234 ~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~~-----fssi~CyAFgPp~cvS~e 295 (633)
T PLN02847 234 AKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQKE-----FSSTTCVTFAPAACMTWD 295 (633)
T ss_pred HHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCCC-----CCCceEEEecCchhcCHH
Confidence 334445556666778877 69999999999988888766653321 23466677765 344443
No 143
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=79.91 E-value=4 Score=35.77 Aligned_cols=67 Identities=18% Similarity=0.224 Sum_probs=41.3
Q ss_pred cceeEEeCCCCcccccccCCCcccccccc-hHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHH
Q 038976 84 SNLLYVDQPTGTGFSYTSDKRDIRHNENG-VSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 84 anvlfiDqP~G~GfSy~~~~~~~~~~~~~-~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~ 154 (220)
+.||-.|- +|.|-|.....+.......+ +..|+-..|..--+.- ...|+|.+|||+||+-.-.++.+
T Consensus 58 f~Vlt~dy-RG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~---~~~P~y~vgHS~GGqa~gL~~~~ 125 (281)
T COG4757 58 FEVLTFDY-RGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKAL---PGHPLYFVGHSFGGQALGLLGQH 125 (281)
T ss_pred ceEEEEec-ccccCCCccccccCccchhhhhhcchHHHHHHHHhhC---CCCceEEeeccccceeecccccC
Confidence 46777886 89998875543322222211 3356666563332332 35689999999999987655543
No 144
>PLN02934 triacylglycerol lipase
Probab=79.79 E-value=5 Score=38.61 Aligned_cols=40 Identities=23% Similarity=0.347 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHc
Q 038976 115 NDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHN 157 (220)
Q Consensus 115 ~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~ 157 (220)
..+...|+++++++|.+ +++++|||-||..+...|..+..
T Consensus 305 ~~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHH
Confidence 34677788888888765 69999999999999888777654
No 145
>PLN00413 triacylglycerol lipase
Probab=79.28 E-value=2.8 Score=39.99 Aligned_cols=39 Identities=23% Similarity=0.467 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHc
Q 038976 116 DLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHN 157 (220)
Q Consensus 116 d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~ 157 (220)
++...|++.++++|.. +++++|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHHh
Confidence 5667778888887755 69999999999999888876653
No 146
>PLN02162 triacylglycerol lipase
Probab=78.87 E-value=2.9 Score=39.77 Aligned_cols=39 Identities=21% Similarity=0.366 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHc
Q 038976 116 DLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHN 157 (220)
Q Consensus 116 d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~ 157 (220)
.+.+.|++.+.++|.+ +++++|||.||..+-..|..+..
T Consensus 263 ~I~~~L~~lL~k~p~~---kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 263 TIRQMLRDKLARNKNL---KYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHhCCCc---eEEEEecChHHHHHHHHHHHHHH
Confidence 4556677777777754 69999999999998877776654
No 147
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=78.74 E-value=11 Score=36.11 Aligned_cols=67 Identities=16% Similarity=0.198 Sum_probs=47.1
Q ss_pred cceeEEeCCCCcccccccCCCcc----cccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHH
Q 038976 84 SNLLYVDQPTGTGFSYTSDKRDI----RHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAF 151 (220)
Q Consensus 84 anvlfiDqP~G~GfSy~~~~~~~----~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~l 151 (220)
|.|+.++. +=-|-|........ .-+..|+-.|+.+|+++.=.+++.-...|++.+|-||.|....-+
T Consensus 119 A~v~~lEH-RFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~ 189 (514)
T KOG2182|consen 119 ATVFQLEH-RFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWF 189 (514)
T ss_pred CeeEEeee-eccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHH
Confidence 47888887 77777753322111 124567788999999888778876666699999999998755433
No 148
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=77.69 E-value=4.6 Score=36.51 Aligned_cols=63 Identities=21% Similarity=0.226 Sum_probs=43.8
Q ss_pred ceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHH
Q 038976 85 NLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVH 156 (220)
Q Consensus 85 nvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~ 156 (220)
.+.-||. +-.|.|-... ..+.+.+|+|+..|+...-. .+...+..|.|||.|| -..+++....
T Consensus 82 ~v~~vd~-RnHG~Sp~~~----~h~~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG-~~~~m~~t~~ 144 (315)
T KOG2382|consen 82 DVYAVDV-RNHGSSPKIT----VHNYEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG-VKVAMAETLK 144 (315)
T ss_pred ceEEEec-ccCCCCcccc----ccCHHHHHHHHHHHHHHccc---ccccCCceecccCcch-HHHHHHHHHh
Confidence 6778887 8899885433 24567788898888855532 2456689999999999 4445554444
No 149
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=77.31 E-value=16 Score=32.80 Aligned_cols=101 Identities=17% Similarity=0.255 Sum_probs=59.8
Q ss_pred CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeeccccccccc--ceeEEeCCCCcccccccCCCcccccccchHHH
Q 038976 39 KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKAS--NLLYVDQPTGTGFSYTSDKRDIRHNENGVSND 116 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~a--nvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d 116 (220)
+..+|+=++|-||+=-=+ --+ -++...+ .+|=|.-| |-|++-..... ..+. .+
T Consensus 34 ~~gTVv~~hGsPGSH~DF---kYi---------------~~~l~~~~iR~I~iN~P-Gf~~t~~~~~~--~~~n----~e 88 (297)
T PF06342_consen 34 PLGTVVAFHGSPGSHNDF---KYI---------------RPPLDEAGIRFIGINYP-GFGFTPGYPDQ--QYTN----EE 88 (297)
T ss_pred CceeEEEecCCCCCccch---hhh---------------hhHHHHcCeEEEEeCCC-CCCCCCCCccc--ccCh----HH
Confidence 455899999999964211 000 0111222 24555666 77776433221 2222 23
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccC
Q 038976 117 LYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGL 178 (220)
Q Consensus 117 ~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 178 (220)
-..|+.+++++- ..+ .++.++|||-|+--+-.+|... ++.|+++.||.
T Consensus 89 r~~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~------------~~~g~~lin~~ 136 (297)
T PF06342_consen 89 RQNFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH------------PLHGLVLINPP 136 (297)
T ss_pred HHHHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC------------ccceEEEecCC
Confidence 345666666653 343 5789999999998777776442 46799999985
No 150
>PRK14567 triosephosphate isomerase; Provisional
Probab=77.29 E-value=6.9 Score=34.30 Aligned_cols=60 Identities=13% Similarity=0.202 Sum_probs=44.6
Q ss_pred chHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 112 GVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 112 ~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
+.++++..++++++.++-+-....+-|. |||-.-|.-+..|.+. -++.|+.||.+.+|+.
T Consensus 179 e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~--------~diDG~LVGgasL~~~ 238 (253)
T PRK14567 179 EQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSL--------PDVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcC--------CCCCEEEeehhhhcHH
Confidence 3577888999999876422112234444 9999999999999864 3589999999999875
No 151
>PRK14566 triosephosphate isomerase; Provisional
Probab=76.45 E-value=6.9 Score=34.46 Aligned_cols=59 Identities=19% Similarity=0.308 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 113 VSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
.++++..+|++++.+.-....+.+=|. |||-.-|.-+..|.+. -++.|++||..-+|+.
T Consensus 190 ~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~--------~dIDG~LVGgASL~~~ 248 (260)
T PRK14566 190 QAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQ--------PDVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcC--------CCCCeEEechHhcCHH
Confidence 467889999999875321212234444 9999999999999864 4589999999999875
No 152
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=74.66 E-value=9.4 Score=36.32 Aligned_cols=83 Identities=19% Similarity=0.276 Sum_probs=58.8
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChhccccchh--HH-HHh
Q 038976 118 YDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGVQYKAYP--DY-ALD 194 (220)
Q Consensus 118 ~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~~q~~~~~--~~-~~~ 194 (220)
...+++|+.+-|++ -|..|.|=||+-+-..|++..+ -+.||+.|.|.++......... .. ...
T Consensus 103 K~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQryP~----------dfDGIlAgaPA~~~~~~~~~~~~~~~~~~~ 168 (474)
T PF07519_consen 103 KALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRYPE----------DFDGILAGAPAINWTHLQLAHAWPAQVMYP 168 (474)
T ss_pred HHHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhChh----------hcCeEEeCCchHHHHHHHHHhhhhhhhhcc
Confidence 35577888877766 5999999999999888887653 4899999999988654332211 11 111
Q ss_pred --CCCCCHHHHHHHHhh-hHHHH
Q 038976 195 --MGIINKSQYNRISKI-IPVCE 214 (220)
Q Consensus 195 --~gli~~~~~~~~~~~-~~~c~ 214 (220)
...++..+.+.+.+. +++|.
T Consensus 169 ~~~~~~~~~~~~~i~~avl~~CD 191 (474)
T PF07519_consen 169 DPGGYLSPCKLDLIHAAVLAACD 191 (474)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcc
Confidence 368888888888754 45665
No 153
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=74.43 E-value=2.6 Score=26.73 Aligned_cols=34 Identities=18% Similarity=0.371 Sum_probs=27.2
Q ss_pred ccCCChhccccchhHHHHhCCCCCHHHHHHHHhh
Q 038976 176 NGLTDPGVQYKAYPDYALDMGIINKSQYNRISKI 209 (220)
Q Consensus 176 ng~~dp~~q~~~~~~~~~~~gli~~~~~~~~~~~ 209 (220)
.|.+||.....--.+=|+..|+||.+.+..+.+.
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e~ 44 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLEA 44 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHcC
Confidence 4778898877777788999999999999888653
No 154
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=74.31 E-value=5.7 Score=33.99 Aligned_cols=38 Identities=24% Similarity=0.414 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHc
Q 038976 116 DLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHN 157 (220)
Q Consensus 116 d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~ 157 (220)
...+++++..++++. +++++|||=||..+-..|..+.+
T Consensus 70 ~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccH
Confidence 445666666665443 59999999999988777777543
No 155
>PLN03037 lipase class 3 family protein; Provisional
Probab=71.97 E-value=11 Score=36.37 Aligned_cols=63 Identities=17% Similarity=0.139 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHHHHHCCCC-CCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 113 VSNDLYDFLQAFFEEHPKL-AENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~p~~-~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
+.+++...|++..+++++. ....++|+|||.||..+-..|..|....... .++.-+..|.|-+
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~----~~VtvyTFGsPRV 359 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPAL----SNISVISFGAPRV 359 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCCC----CCeeEEEecCCCc
Confidence 3456666777777776643 2336999999999999988887877543211 1344455555544
No 156
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=70.26 E-value=28 Score=30.52 Aligned_cols=89 Identities=16% Similarity=0.219 Sum_probs=53.9
Q ss_pred CEEEEEcCCCChHHHhH-HhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHHHH
Q 038976 41 PVVIWLTGGPGCSSELA-VFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYD 119 (220)
Q Consensus 41 Pl~lwlnGGPG~SS~~g-~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~ 119 (220)
|.+++++++=|.-..+. +-.+.+|- .-++-++.| |.|. ... ...+.++.++...+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~------------------~~v~~l~a~-g~~~----~~~-~~~~l~~~a~~yv~ 56 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL------------------LPVYGLQAP-GYGA----GEQ-PFASLDDMAAAYVA 56 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC------------------ceeeccccC-cccc----ccc-ccCCHHHHHHHHHH
Confidence 57889998777644332 22333432 225556665 3332 111 12345555555555
Q ss_pred HHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccc
Q 038976 120 FLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGN 159 (220)
Q Consensus 120 fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n 159 (220)
.|+ +..|+= |.+|.|.|+||..+=.+|.++..+-
T Consensus 57 ~Ir---~~QP~G---Py~L~G~S~GG~vA~evA~qL~~~G 90 (257)
T COG3319 57 AIR---RVQPEG---PYVLLGWSLGGAVAFEVAAQLEAQG 90 (257)
T ss_pred HHH---HhCCCC---CEEEEeeccccHHHHHHHHHHHhCC
Confidence 553 344543 8999999999999999999998753
No 157
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=69.11 E-value=33 Score=33.24 Aligned_cols=83 Identities=12% Similarity=0.121 Sum_probs=50.1
Q ss_pred cceeEEeCCCCcccccccCCCcccccccc-hHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHH-HHHccccC
Q 038976 84 SNLLYVDQPTGTGFSYTSDKRDIRHNENG-VSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAA-RVHNGNKA 161 (220)
Q Consensus 84 anvlfiDqP~G~GfSy~~~~~~~~~~~~~-~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~-~i~~~n~~ 161 (220)
.+++-||- +|.|.|.... +.+. +.+++.++|....+. ...++++++|+|.||..+...+. ....+.
T Consensus 221 f~V~~iDw-rgpg~s~~~~------~~ddY~~~~i~~al~~v~~~---~g~~kv~lvG~cmGGtl~a~ala~~aa~~~-- 288 (532)
T TIGR01838 221 HTVFVISW-RNPDASQADK------TFDDYIRDGVIAALEVVEAI---TGEKQVNCVGYCIGGTLLSTALAYLAARGD-- 288 (532)
T ss_pred cEEEEEEC-CCCCcccccC------ChhhhHHHHHHHHHHHHHHh---cCCCCeEEEEECcCcHHHHHHHHHHHHhCC--
Confidence 46777886 5777764321 1222 334466666555443 45678999999999998765332 222221
Q ss_pred CCCceeeeeEEEEeccCCChh
Q 038976 162 KEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 162 ~~~~~inLkGi~igng~~dp~ 182 (220)
.-.++++++.+..+|..
T Consensus 289 ----~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 289 ----DKRIKSATFFTTLLDFS 305 (532)
T ss_pred ----CCccceEEEEecCcCCC
Confidence 12478888777777754
No 158
>PRK07868 acyl-CoA synthetase; Validated
Probab=67.92 E-value=17 Score=37.50 Aligned_cols=22 Identities=27% Similarity=0.252 Sum_probs=18.2
Q ss_pred CCCEEEEeecCcccchhHHHHH
Q 038976 133 ENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 133 ~~~~yi~GeSYgG~yvp~la~~ 154 (220)
.++++++|+|.||..+-.+|..
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~ 161 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAY 161 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHh
Confidence 3579999999999988777653
No 159
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=67.36 E-value=3.5 Score=34.03 Aligned_cols=94 Identities=19% Similarity=0.265 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCCChHHH----hHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcc--cccccCCCccc-----
Q 038976 39 KDPVVIWLTGGPGCSSE----LAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTG--FSYTSDKRDIR----- 107 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~SS~----~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~G--fSy~~~~~~~~----- 107 (220)
..|.||.+++--|...- --.|.+.| |. ++-.|--.|.+ .+.........
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~G-y~-------------------v~~pD~f~~~~~~~~~~~~~~~~~~~~~~ 72 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEG-YV-------------------VLAPDLFGGRGAPPSDPEEAFAAMRELFA 72 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT--E-------------------EEEE-CCCCTS--CCCHHCHHHHHHHCHH
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcC-CC-------------------EEecccccCCCCCccchhhHHHHHHHHHh
Confidence 68999999998887643 23445667 54 33333222222 11111100000
Q ss_pred ccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHH
Q 038976 108 HNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAA 153 (220)
Q Consensus 108 ~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~ 153 (220)
...+.+.+|+..++ ++++..|+....++-++|-|+||.++-.+|.
T Consensus 73 ~~~~~~~~~~~aa~-~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~ 117 (218)
T PF01738_consen 73 PRPEQVAADLQAAV-DYLRAQPEVDPGKIGVVGFCWGGKLALLLAA 117 (218)
T ss_dssp HSHHHHHHHHHHHH-HHHHCTTTCEEEEEEEEEETHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHH-HHHHhccccCCCcEEEEEEecchHHhhhhhh
Confidence 01234455654444 7778777667778999999999988766653
No 160
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=66.64 E-value=7.2 Score=34.03 Aligned_cols=64 Identities=23% Similarity=0.370 Sum_probs=43.4
Q ss_pred ceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHcc
Q 038976 85 NLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNG 158 (220)
Q Consensus 85 nvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~ 158 (220)
-++=|+-| |-|--+... ..++.++.|+.+...|+ |-+..+|+-++|||+||+.+=.+|.++.+.
T Consensus 35 el~avqlP-GR~~r~~ep---~~~di~~Lad~la~el~------~~~~d~P~alfGHSmGa~lAfEvArrl~~~ 98 (244)
T COG3208 35 ELLAVQLP-GRGDRFGEP---LLTDIESLADELANELL------PPLLDAPFALFGHSMGAMLAFEVARRLERA 98 (244)
T ss_pred heeeecCC-CcccccCCc---ccccHHHHHHHHHHHhc------cccCCCCeeecccchhHHHHHHHHHHHHHc
Confidence 46667766 655332221 23456666666665552 235567999999999999999999999864
No 161
>PLN02429 triosephosphate isomerase
Probab=65.72 E-value=14 Score=33.48 Aligned_cols=59 Identities=12% Similarity=0.217 Sum_probs=43.7
Q ss_pred hHHHHHHHHHHHHHH-CCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 113 VSNDLYDFLQAFFEE-HPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~-~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
.++.+..++++|+.+ +.+-...++-|. |||-.-|.-+.+|... .+++|+.||.+.+++.
T Consensus 240 ~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~--------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 240 QAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE--------EDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC--------CCCCEEEeecceecHH
Confidence 466788899998875 322222345555 9999999999888754 5689999999999865
No 162
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=65.45 E-value=9.7 Score=32.63 Aligned_cols=44 Identities=18% Similarity=0.264 Sum_probs=35.6
Q ss_pred cchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHH
Q 038976 111 NGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARV 155 (220)
Q Consensus 111 ~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i 155 (220)
.++..|+..++ .|+.+.|+-...++.++|-|+||+.+-.+|...
T Consensus 90 ~~~~~d~~a~~-~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~ 133 (236)
T COG0412 90 AEVLADIDAAL-DYLARQPQVDPKRIGVVGFCMGGGLALLAATRA 133 (236)
T ss_pred HHHHHHHHHHH-HHHHhCCCCCCceEEEEEEcccHHHHHHhhccc
Confidence 55667777666 888888877777899999999999887777664
No 163
>COG0627 Predicted esterase [General function prediction only]
Probab=64.87 E-value=24 Score=31.91 Aligned_cols=74 Identities=22% Similarity=0.196 Sum_probs=40.8
Q ss_pred cccccceeEEeCCCCcccccccCCCcccccccchHHHHHHHH-----HHHHHHCCCCCC-CCEEEEeecCcccchhHHHH
Q 038976 80 WDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFL-----QAFFEEHPKLAE-NDFYITGESYAGHYIPAFAA 153 (220)
Q Consensus 80 W~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl-----~~f~~~~p~~~~-~~~yi~GeSYgG~yvp~la~ 153 (220)
+....++--|+ |+|.+.|+-.+-..-..... ..++..|| ..+.+.||.-.. ..--|+|+|.||+=+-.+|.
T Consensus 95 ~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~~--~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~ 171 (316)
T COG0627 95 RGAGVNISVVM-PLGGGASFYSDWTQPPWASG--PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLAL 171 (316)
T ss_pred ccCCCCccccc-cCCCccceecccccCccccC--ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhh
Confidence 44555555666 58999887543211000011 11222222 245555653331 35799999999998877776
Q ss_pred HHH
Q 038976 154 RVH 156 (220)
Q Consensus 154 ~i~ 156 (220)
+-.
T Consensus 172 ~~p 174 (316)
T COG0627 172 KHP 174 (316)
T ss_pred hCc
Confidence 653
No 164
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=64.86 E-value=7.3 Score=33.09 Aligned_cols=58 Identities=24% Similarity=0.299 Sum_probs=40.5
Q ss_pred CCCcccccccCCCcccccccchHHHHHHHHHHHHH-HCCCCCCCCEEEEeecCcccchhHHHHHHHc
Q 038976 92 PTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFE-EHPKLAENDFYITGESYAGHYIPAFAARVHN 157 (220)
Q Consensus 92 P~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~-~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~ 157 (220)
-+|+|-|.+.-..++ .-.+|....| .|++ +||.-.. +.+.|-|+|+..+..+|.+..+
T Consensus 68 fRgVG~S~G~fD~Gi-----GE~~Da~aal-dW~~~~hp~s~~--~~l~GfSFGa~Ia~~la~r~~e 126 (210)
T COG2945 68 FRGVGRSQGEFDNGI-----GELEDAAAAL-DWLQARHPDSAS--CWLAGFSFGAYIAMQLAMRRPE 126 (210)
T ss_pred ccccccccCcccCCc-----chHHHHHHHH-HHHHhhCCCchh--hhhcccchHHHHHHHHHHhccc
Confidence 389999987655443 1234555555 6665 6776643 6999999999888888888754
No 165
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=64.13 E-value=12 Score=30.98 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=25.8
Q ss_pred chHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHH
Q 038976 112 GVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 112 ~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~ 154 (220)
..+.++..|++..-..+ =..-.+-++|||||+..+-.-+..
T Consensus 89 ~ga~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATH--GPDAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred HHHHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHHHHHhhh
Confidence 34556666666654444 112369999999998877555444
No 166
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=63.06 E-value=25 Score=33.84 Aligned_cols=140 Identities=15% Similarity=0.261 Sum_probs=76.9
Q ss_pred eEEEEEEEecCCCCCCEEEEEcCCCChHHH--hHHhhhc-CCeEEcCCCceeecccccccccceeEEeCCCCcccccccC
Q 038976 26 KMFYFFFESRNSKKDPVVIWLTGGPGCSSE--LAVFYEN-GPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSD 102 (220)
Q Consensus 26 ~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~--~g~~~e~-GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~ 102 (220)
.++|+|.+.. -.-||.+++.|=-.+-.. +.++-.+ .|| |||=|+ +=-|=++-..
T Consensus 277 Ei~yYFnPGD--~KPPL~VYFSGyR~aEGFEgy~MMk~Lg~Pf--------------------LL~~Dp-RleGGaFYlG 333 (511)
T TIGR03712 277 EFIYYFNPGD--FKPPLNVYFSGYRPAEGFEGYFMMKRLGAPF--------------------LLIGDP-RLEGGAFYLG 333 (511)
T ss_pred eeEEecCCcC--CCCCeEEeeccCcccCcchhHHHHHhcCCCe--------------------EEeecc-ccccceeeeC
Confidence 3555554442 256999999995443332 2333333 366 567774 4333233111
Q ss_pred CCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 103 KRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 103 ~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
.++.-+.+.+.+++-+..- .|..+++.|.|=|+|..=+-..+. +++=.+|++|-|.++--
T Consensus 334 -------s~eyE~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga------------~l~P~AIiVgKPL~NLG 393 (511)
T TIGR03712 334 -------SDEYEQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGA------------KLSPHAIIVGKPLVNLG 393 (511)
T ss_pred -------cHHHHHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhcc------------cCCCceEEEcCcccchh
Confidence 1122334455555555532 688889999999998653333332 35566778888877632
Q ss_pred c-----------cccchhHHHHh-CCCCCHHHHHHHHh
Q 038976 183 V-----------QYKAYPDYALD-MGIINKSQYNRISK 208 (220)
Q Consensus 183 ~-----------q~~~~~~~~~~-~gli~~~~~~~~~~ 208 (220)
+ ......|.+.. .|-++.+..+++.+
T Consensus 394 tiA~n~rL~RP~~F~TslDvl~~~~g~~s~~~i~~ln~ 431 (511)
T TIGR03712 394 TIASRMRLDRPDEFGTALDILLLNTGGTSSEDVVKLDN 431 (511)
T ss_pred hhhccccccCCCCCchHHHhHHhhcCCCCHHHHHHHHH
Confidence 2 12233344443 46777766666654
No 167
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=61.91 E-value=5.3 Score=33.35 Aligned_cols=125 Identities=17% Similarity=0.207 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeeccccccc-ccceeEEeCCCCc----ccccc---------cCCC
Q 038976 39 KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDK-ASNLLYVDQPTGT----GFSYT---------SDKR 104 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~-~anvlfiDqP~G~----GfSy~---------~~~~ 104 (220)
++|-||.|||.=..+.++ -...++++ ....+ .+.++|+|.|.-+ |.... ....
T Consensus 3 ~k~riLcLHG~~~na~if--~~q~~~l~-----------~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIF--RQQTSALR-----------KALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGP 69 (212)
T ss_dssp ---EEEEE--TT--HHHH--HHHTHHHH-----------HHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT-
T ss_pred CCceEEEeCCCCcCHHHH--HHHHHHHH-----------HHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCc
Confidence 468899999973333332 11222222 12334 6788888887644 22211 1110
Q ss_pred cc---cc----cccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEecc
Q 038976 105 DI---RH----NENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNG 177 (220)
Q Consensus 105 ~~---~~----~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng 177 (220)
.+ .. ......++.++.|.+++++..-| .=|+|-|=|+..+..|+....+..... ...++|-+++-+|
T Consensus 70 ~~~W~~~~~~~~~~~~~~~sl~~l~~~i~~~GPf----dGvlGFSQGA~lAa~ll~~~~~~~~~~--~~~~~kf~V~~sg 143 (212)
T PF03959_consen 70 FYSWWDPDDDDHEYEGLDESLDYLRDYIEENGPF----DGVLGFSQGAALAALLLALQQRGRPDG--AHPPFKFAVFISG 143 (212)
T ss_dssp -EESS---S-SGGG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST----T----SEEEEES-
T ss_pred ceeeeecCCCcccccCHHHHHHHHHHHHHhcCCe----EEEEeecHHHHHHHHHHHHHHhhcccc--cCCCceEEEEEcc
Confidence 00 00 11223355667777777764333 348999999999888887766543211 2356788887788
Q ss_pred CCChh
Q 038976 178 LTDPG 182 (220)
Q Consensus 178 ~~dp~ 182 (220)
+.-+.
T Consensus 144 ~~p~~ 148 (212)
T PF03959_consen 144 FPPPD 148 (212)
T ss_dssp ---EE
T ss_pred cCCCc
Confidence 76543
No 168
>KOG3101 consensus Esterase D [General function prediction only]
Probab=61.69 E-value=37 Score=29.58 Aligned_cols=41 Identities=17% Similarity=0.307 Sum_probs=23.8
Q ss_pred CccceEEEEEc----CCCCCceEEEEEEEecCCC---CCCEEEEEcCC
Q 038976 9 DLGHHAGYYKL----PHSHDAKMFYFFFESRNSK---KDPVVIWLTGG 49 (220)
Q Consensus 9 ~~~~ysGyl~v----~~~~~~~lFy~~~~s~~~~---~~Pl~lwlnGG 49 (220)
..+.+-|+..+ +.+..-.|=|-.|-....+ .-|+++||.|=
T Consensus 6 snk~f~G~q~vy~H~S~tl~c~Mtf~vylPp~a~~~k~~P~lf~LSGL 53 (283)
T KOG3101|consen 6 SNKCFGGRQKVYKHNSNTLKCSMTFGVYLPPDAPRGKRCPVLFYLSGL 53 (283)
T ss_pred ccccccceeeeeeccccccccceEEEEecCCCcccCCcCceEEEecCC
Confidence 44555566555 2233455666655444333 46999999973
No 169
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=61.11 E-value=12 Score=35.10 Aligned_cols=47 Identities=15% Similarity=0.371 Sum_probs=38.3
Q ss_pred ccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHc
Q 038976 108 HNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHN 157 (220)
Q Consensus 108 ~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~ 157 (220)
++.++.+.|+...+ +|+.+ +++.+++.|+|-|+|.-..|..-+++..
T Consensus 303 rtPe~~a~Dl~r~i-~~y~~--~w~~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 303 RTPEQIAADLSRLI-RFYAR--RWGAKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred CCHHHHHHHHHHHH-HHHHH--hhCcceEEEEeecccchhhHHHHHhCCH
Confidence 56788999998877 55555 6888999999999999999987777643
No 170
>PLN02561 triosephosphate isomerase
Probab=60.86 E-value=21 Score=31.28 Aligned_cols=58 Identities=17% Similarity=0.291 Sum_probs=43.1
Q ss_pred hHHHHHHHHHHHHHH-CCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCCh
Q 038976 113 VSNDLYDFLQAFFEE-HPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDP 181 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~-~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp 181 (220)
.++++..++++++.+ +..-....+-|. |||-.-|.-+.+|... .++.|+.||.+.+|+
T Consensus 181 ~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 181 QAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ--------PDVDGFLVGGASLKP 239 (253)
T ss_pred HHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC--------CCCCeEEEehHhhHH
Confidence 467788889888864 322222345554 9999999999998753 569999999999997
No 171
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=60.82 E-value=7.1 Score=36.01 Aligned_cols=24 Identities=13% Similarity=0.131 Sum_probs=19.4
Q ss_pred CCCEEEEeecCcccchhHHHHHHH
Q 038976 133 ENDFYITGESYAGHYIPAFAARVH 156 (220)
Q Consensus 133 ~~~~yi~GeSYgG~yvp~la~~i~ 156 (220)
++++.|+|||+||.++-.+-....
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhcc
Confidence 679999999999988776655553
No 172
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=60.17 E-value=9.7 Score=38.69 Aligned_cols=34 Identities=15% Similarity=0.344 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHCCCCC---CCCEEEEeecCcccchh
Q 038976 116 DLYDFLQAFFEEHPKLA---ENDFYITGESYAGHYIP 149 (220)
Q Consensus 116 d~~~fl~~f~~~~p~~~---~~~~yi~GeSYgG~yvp 149 (220)
|..+.+...++.-+||. ...+.|+||||||..+=
T Consensus 161 dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAr 197 (973)
T KOG3724|consen 161 DAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVAR 197 (973)
T ss_pred HHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHH
Confidence 33444555556556776 45699999999997543
No 173
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=59.66 E-value=7.7 Score=33.48 Aligned_cols=59 Identities=22% Similarity=0.270 Sum_probs=37.5
Q ss_pred cceeEEeCCCCcccccccCCCccc----ccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHH
Q 038976 84 SNLLYVDQPTGTGFSYTSDKRDIR----HNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 84 anvlfiDqP~G~GfSy~~~~~~~~----~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~ 154 (220)
.+|+-||+ .|.|-|...+.. .. ..+.+.|-|+.++| +-.+|-|.|-|=||.-+-..|.+
T Consensus 72 ~TivawDP-pGYG~SrPP~Rk-f~~~ff~~Da~~avdLM~aL----------k~~~fsvlGWSdGgiTalivAak 134 (277)
T KOG2984|consen 72 VTIVAWDP-PGYGTSRPPERK-FEVQFFMKDAEYAVDLMEAL----------KLEPFSVLGWSDGGITALIVAAK 134 (277)
T ss_pred eEEEEECC-CCCCCCCCCccc-chHHHHHHhHHHHHHHHHHh----------CCCCeeEeeecCCCeEEEEeecc
Confidence 68999996 599999754321 11 12333444554444 33579999999999876555544
No 174
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=59.54 E-value=5.2 Score=33.64 Aligned_cols=16 Identities=38% Similarity=0.912 Sum_probs=13.9
Q ss_pred CCCCEEEEEcCCCChH
Q 038976 38 KKDPVVIWLTGGPGCS 53 (220)
Q Consensus 38 ~~~Pl~lwlnGGPG~S 53 (220)
++.|-|+|+-|||||-
T Consensus 5 ~~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSG 20 (195)
T ss_pred ccCCCEEEEEcCCCCC
Confidence 3789999999999975
No 175
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=57.32 E-value=22 Score=31.23 Aligned_cols=39 Identities=13% Similarity=0.232 Sum_probs=24.5
Q ss_pred CEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccC
Q 038976 135 DFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGL 178 (220)
Q Consensus 135 ~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 178 (220)
++.|+|||=||+-+-.+|....+. ...+++++++..+|.
T Consensus 92 ~l~l~GHSrGGk~Af~~al~~~~~-----~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 92 KLALAGHSRGGKVAFAMALGNASS-----SLDLRFSALILLDPV 130 (259)
T ss_pred ceEEeeeCCCCHHHHHHHhhhccc-----ccccceeEEEEeccc
Confidence 699999999999766666554221 112455555555543
No 176
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=57.14 E-value=18 Score=29.37 Aligned_cols=39 Identities=8% Similarity=0.039 Sum_probs=26.4
Q ss_pred CCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCC
Q 038976 133 ENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTD 180 (220)
Q Consensus 133 ~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d 180 (220)
.++.+|+|||.|..-+-..+. .+ ...+++|+++..|+-.
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~--~~-------~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA--EQ-------SQKKVAGALLVAPFDP 92 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH--HT-------CCSSEEEEEEES--SC
T ss_pred CCCeEEEEeCHHHHHHHHHHh--hc-------ccccccEEEEEcCCCc
Confidence 457999999999775544443 22 1357999999999854
No 177
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=55.37 E-value=37 Score=30.28 Aligned_cols=82 Identities=15% Similarity=0.138 Sum_probs=46.4
Q ss_pred cccccceeEEeCCCCcccccccCCCcc-cccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHcc
Q 038976 80 WDKASNLLYVDQPTGTGFSYTSDKRDI-RHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNG 158 (220)
Q Consensus 80 W~~~anvlfiDqP~G~GfSy~~~~~~~-~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~ 158 (220)
..+.+-++.||.| |-..--..-..++ -.+.++.|+++.+.|..| .+ +.+.-+|+--|+.....+|..-.
T Consensus 52 i~~~f~i~Hi~aP-Gqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f-----~l--k~vIg~GvGAGAnIL~rfAl~~p-- 121 (283)
T PF03096_consen 52 ILQNFCIYHIDAP-GQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF-----GL--KSVIGFGVGAGANILARFALKHP-- 121 (283)
T ss_dssp HHTTSEEEEEE-T-TTSTT-----TT-----HHHHHCTHHHHHHHH-----T-----EEEEEETHHHHHHHHHHHHSG--
T ss_pred HhhceEEEEEeCC-CCCCCcccccccccccCHHHHHHHHHHHHHhC-----Cc--cEEEEEeeccchhhhhhccccCc--
Confidence 4567889999987 5443222222221 246777888887777544 23 35888999988777777774322
Q ss_pred ccCCCCceeeeeEEEEeccCC
Q 038976 159 NKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 159 n~~~~~~~inLkGi~igng~~ 179 (220)
-.+.|+++.|+..
T Consensus 122 --------~~V~GLiLvn~~~ 134 (283)
T PF03096_consen 122 --------ERVLGLILVNPTC 134 (283)
T ss_dssp --------GGEEEEEEES---
T ss_pred --------cceeEEEEEecCC
Confidence 2478889887654
No 178
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=54.85 E-value=40 Score=29.19 Aligned_cols=58 Identities=17% Similarity=0.320 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHHHH-CCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 113 VSNDLYDFLQAFFEE-HPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~-~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
.++++..++++++.+ +.+ ....+-|. |||-.-|.=+..+.+. -++.|+.+|.+.+|+.
T Consensus 177 ~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~--------~~vDG~LVG~Asl~~~ 235 (242)
T cd00311 177 QAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQ--------PDIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcC--------CCCCEEEeehHhhCHH
Confidence 467888999999875 333 33345555 9999999989888854 2589999999998854
No 179
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=54.35 E-value=11 Score=29.76 Aligned_cols=17 Identities=24% Similarity=0.524 Sum_probs=15.2
Q ss_pred CCCCCEEEEEcCCCChH
Q 038976 37 SKKDPVVIWLTGGPGCS 53 (220)
Q Consensus 37 ~~~~Pl~lwlnGGPG~S 53 (220)
+|++||||-|+|.||+-
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 56999999999999974
No 180
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=54.32 E-value=31 Score=30.12 Aligned_cols=61 Identities=18% Similarity=0.214 Sum_probs=31.1
Q ss_pred cchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeE-EEEeccCC
Q 038976 111 NGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKG-FAIGNGLT 179 (220)
Q Consensus 111 ~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkG-i~igng~~ 179 (220)
...++-+...| ..+++ +|.=+++.++|||+||.-+- .++.+.-.... ...|+- |.||.|+=
T Consensus 83 ~~qa~wl~~vl-~~L~~--~Y~~~~~N~VGHSmGg~~~~---~yl~~~~~~~~--~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 83 KKQAKWLKKVL-KYLKK--KYHFKKFNLVGHSMGGLSWT---YYLENYGNDKN--LPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHHH-HHHHH--CC--SEEEEEEETHHHHHHH---HHHHHCTTGTT--S-EEEEEEEES--TT
T ss_pred HHHHHHHHHHH-HHHHH--hcCCCEEeEEEECccHHHHH---HHHHHhccCCC--CcccceEEEeccccC
Confidence 33445555555 34444 56667899999999998653 44443221111 124544 45666553
No 181
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=54.31 E-value=40 Score=29.38 Aligned_cols=58 Identities=19% Similarity=0.294 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHHHHH-CCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 113 VSNDLYDFLQAFFEE-HPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~-~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
.++++..++++++.+ +. -....+-|. |||-.-|.-+.++... .++.|+.+|.+.+++.
T Consensus 181 ~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~--------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 181 QAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ--------PDIDGALVGGASLKAE 239 (250)
T ss_pred HHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEeeeeechH
Confidence 567888999998874 32 112344454 9999999999998753 4689999999998765
No 182
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=53.12 E-value=8.9 Score=35.34 Aligned_cols=37 Identities=14% Similarity=0.055 Sum_probs=22.1
Q ss_pred CEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 135 DFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 135 ~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
++-++||||||.-+-..+.+- ..++..++-+||.-|.
T Consensus 229 ~i~~~GHSFGGATa~~~l~~d-----------~r~~~~I~LD~W~~Pl 265 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALRQD-----------TRFKAGILLDPWMFPL 265 (379)
T ss_dssp EEEEEEETHHHHHHHHHHHH------------TT--EEEEES---TTS
T ss_pred heeeeecCchHHHHHHHHhhc-----------cCcceEEEeCCcccCC
Confidence 699999999997665433321 2467777888888764
No 183
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=53.11 E-value=72 Score=27.86 Aligned_cols=122 Identities=24% Similarity=0.220 Sum_probs=74.9
Q ss_pred ceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCC
Q 038976 85 NLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEG 164 (220)
Q Consensus 85 nvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~ 164 (220)
..+-+|= .|-|=|-..-. ..+-...|+|+...+|-|-. ...-==.|.|||=||--+-..|.++.+- .
T Consensus 64 s~fRfDF-~GnGeS~gsf~---~Gn~~~eadDL~sV~q~~s~----~nr~v~vi~gHSkGg~Vvl~ya~K~~d~-----~ 130 (269)
T KOG4667|consen 64 SAFRFDF-SGNGESEGSFY---YGNYNTEADDLHSVIQYFSN----SNRVVPVILGHSKGGDVVLLYASKYHDI-----R 130 (269)
T ss_pred eEEEEEe-cCCCCcCCccc---cCcccchHHHHHHHHHHhcc----CceEEEEEEeecCccHHHHHHHHhhcCc-----h
Confidence 3556773 78887754322 22334456899888865533 1111236789999999999999998861 1
Q ss_pred ceeeeeEEEEeccCCChhccccchhHHHHhCCCCCH--------------HHHHHHHh-hhHHHHHHHhcC
Q 038976 165 IHINLKGFAIGNGLTDPGVQYKAYPDYALDMGIINK--------------SQYNRISK-IIPVCELAIKLC 220 (220)
Q Consensus 165 ~~inLkGi~igng~~dp~~q~~~~~~~~~~~gli~~--------------~~~~~~~~-~~~~c~~~~~~c 220 (220)
..||+.|=..+-+.|....+ ..+.++.-+.|.|+- ...+.+.. ..+.|.+.-++|
T Consensus 131 ~viNcsGRydl~~~I~eRlg-~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C 200 (269)
T KOG4667|consen 131 NVINCSGRYDLKNGINERLG-EDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQC 200 (269)
T ss_pred heEEcccccchhcchhhhhc-ccHHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccC
Confidence 35788777776666654444 346666666676653 23344433 235677655556
No 184
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=51.30 E-value=8.6 Score=35.65 Aligned_cols=57 Identities=25% Similarity=0.254 Sum_probs=33.7
Q ss_pred CCCEEEEEcCCCCh--HHHhHHhhhcCCeEEcC------CCceeecccccccccceeEEeCCCCcc
Q 038976 39 KDPVVIWLTGGPGC--SSELAVFYENGPFSIAD------NMSLVWNEHGWDKASNLLYVDQPTGTG 96 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~--SS~~g~~~e~GP~~i~~------~~~l~~n~~sW~~~anvlfiDqP~G~G 96 (220)
+.|+=|=+.|-+|+ ||+.-.+-++|+=.-.. ..+.++.+|.--++.||.+||-| |+|
T Consensus 33 ~~~l~IaV~G~sGsGKSSfINalrGl~~~d~~aA~tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 33 NAPLNIAVTGESGSGKSSFINALRGLGHEDEGAAPTGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp H--EEEEEEESTTSSHHHHHHHHTT--TTSTTS--SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred cCceEEEEECCCCCCHHHHHHHHhCCCCCCcCcCCCCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 56778888886655 88887777777643211 23455667777889999999998 887
No 185
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=50.71 E-value=9.6 Score=31.85 Aligned_cols=53 Identities=21% Similarity=0.174 Sum_probs=34.3
Q ss_pred HHHHHHHHH-CCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 119 DFLQAFFEE-HPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 119 ~fl~~f~~~-~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
+-|..|+++ ++-...+ ..|+|.|.||.-+-.+|.+-.+ .+.+++.-+|.+++.
T Consensus 100 ~el~p~i~~~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd----------~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 100 EELIPYIEANYRTDPDR-RAIAGHSMGGYGALYLALRHPD----------LFGAVIAFSGALDPS 153 (251)
T ss_dssp THHHHHHHHHSSEEECC-EEEEEETHHHHHHHHHHHHSTT----------TESEEEEESEESETT
T ss_pred ccchhHHHHhcccccce-eEEeccCCCcHHHHHHHHhCcc----------ccccccccCcccccc
Confidence 334455553 3333333 8999999999887777765332 377788888776654
No 186
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=49.43 E-value=1.2e+02 Score=29.84 Aligned_cols=134 Identities=20% Similarity=0.214 Sum_probs=78.8
Q ss_pred EEcCCCCCceEEEEEEEecCCCCCCEEEEEcCCCChHHHhHHhhhcCCeEEcC---C--Cceeecccccccc-cceeEEe
Q 038976 17 YKLPHSHDAKMFYFFFESRNSKKDPVVIWLTGGPGCSSELAVFYENGPFSIAD---N--MSLVWNEHGWDKA-SNLLYVD 90 (220)
Q Consensus 17 l~v~~~~~~~lFy~~~~s~~~~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~---~--~~l~~n~~sW~~~-anvlfiD 90 (220)
+.|..+.+..|.=-.|........|+++-.. ..|++-.. . ..+.+.+.-|... .-+|..|
T Consensus 22 v~V~MRDGvrL~~dIy~Pa~~g~~Pvll~~~--------------~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qD 87 (563)
T COG2936 22 VMVPMRDGVRLAADIYRPAGAGPLPVLLSRT--------------RLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQD 87 (563)
T ss_pred eeEEecCCeEEEEEEEccCCCCCCceeEEee--------------ccccccccccCcchhhcccccceeecCceEEEEec
Confidence 3344455556655555443334789888777 33554321 0 0111111123332 2578888
Q ss_pred CCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeee
Q 038976 91 QPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLK 170 (220)
Q Consensus 91 qP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLk 170 (220)
- +|.|-|-+.-... .+ +-++|-++.| +|+.+-|.-++ ++=+.|-||+|.-.-++|.. + .--||
T Consensus 88 v-RG~~~SeG~~~~~--~~--~E~~Dg~D~I-~Wia~QpWsNG-~Vgm~G~SY~g~tq~~~Aa~--~--------pPaLk 150 (563)
T COG2936 88 V-RGRGGSEGVFDPE--SS--REAEDGYDTI-EWLAKQPWSNG-NVGMLGLSYLGFTQLAAAAL--Q--------PPALK 150 (563)
T ss_pred c-cccccCCccccee--cc--ccccchhHHH-HHHHhCCccCC-eeeeecccHHHHHHHHHHhc--C--------Cchhe
Confidence 6 8999997654322 12 2345666655 78888776655 79999999999866555432 1 24588
Q ss_pred EEEEeccCCCh
Q 038976 171 GFAIGNGLTDP 181 (220)
Q Consensus 171 Gi~igng~~dp 181 (220)
.|+.-.+..|-
T Consensus 151 ai~p~~~~~D~ 161 (563)
T COG2936 151 AIAPTEGLVDR 161 (563)
T ss_pred eeccccccccc
Confidence 88887777774
No 187
>PRK14565 triosephosphate isomerase; Provisional
Probab=49.26 E-value=39 Score=29.33 Aligned_cols=52 Identities=13% Similarity=0.232 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChhc
Q 038976 113 VSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGV 183 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~~ 183 (220)
.++++..+++++. +++-|. |||..-|.-+..+.+. -++.|+.||.+.+|+..
T Consensus 175 ~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~--------~~iDG~LvG~asl~~~~ 226 (237)
T PRK14565 175 AIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSI--------NQLSGVLVGSASLDVDS 226 (237)
T ss_pred HHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcC--------CCCCEEEEechhhcHHH
Confidence 4667777787762 133343 9999999999998863 46899999999998763
No 188
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=48.42 E-value=60 Score=28.61 Aligned_cols=65 Identities=25% Similarity=0.248 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHHHHHCCC--C-CCCCEEEEeecCcccchhHHHHHHHccccCCCCceee--eeEEEEeccCCChh
Q 038976 113 VSNDLYDFLQAFFEEHPK--L-AENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHIN--LKGFAIGNGLTDPG 182 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~p~--~-~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~in--LkGi~igng~~dp~ 182 (220)
.+.++++.++.-.+..+. + .+.++.|+|+|=||+=. ..|.++...- .+.++ |.|.+.|.+..|..
T Consensus 47 ~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~~Y----ApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 47 EAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAPSY----APELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred HHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhHHh----CcccccceeEEeccCCccCHH
Confidence 344444445444433332 2 35689999999888744 4454554321 24588 99999999988754
No 189
>PF01555 N6_N4_Mtase: DNA methylase; InterPro: IPR002941 This domain is found in DNA methylases. In prokaryotes, the major role of DNA methylation is to protect host DNA against degradation by restriction enzymes. This family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases. N-4 cytosine-specific DNA methylases (2.1.1.113 from EC) [] are enzymes that specifically methylate the amino group at the C-4 position of cytosines in DNA. Such enzymes are found as components of type II restriction-modification systems in prokaryotes. Such enzymes recognise a specific sequence in DNA and methylate a cytosine in that sequence. By this action they protect DNA from cleavage by type II restriction enzymes that recognise the same sequence. N-6 adenine-specific DNA methylases (2.1.1.72 from EC) (A-Mtase) are enzymes that specifically methylate the amino group at the C-6 position of adenines in DNA. Such enzymes are found in the three existing types of bacterial restriction-modification systems (in type I system the A-Mtase is the product of the hsdM gene, and in type III it is the product of the mod gene). All of these enzymes recognise a specific sequence in DNA and methylate an adenine in that sequence.; GO: 0003677 DNA binding, 0008170 N-methyltransferase activity, 0006306 DNA methylation; PDB: 2ZIF_A 2ZIE_A 2ZIG_A 1NW6_A 1NW8_A 1NW7_A 1NW5_A 1EG2_A 1BOO_A 1G60_B ....
Probab=45.63 E-value=34 Score=27.70 Aligned_cols=40 Identities=18% Similarity=0.425 Sum_probs=21.8
Q ss_pred ceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHH
Q 038976 85 NLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEE 127 (220)
Q Consensus 85 nvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~ 127 (220)
++++.|+|=+++..|.... ..++....++..+++..++.+
T Consensus 2 dliitDPPY~~~~~~~~~~---~~~~~~~~~~y~~~~~~~~~~ 41 (231)
T PF01555_consen 2 DLIITDPPYNIGKDYNNYF---DYGDNKNHEEYLEWMEEWLKE 41 (231)
T ss_dssp EEEEE---TSSSCS--------CSCHCCHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcchhh---hccCCCCHHHHHHHHHHHHHH
Confidence 6899999999999862211 123344456666777777654
No 190
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=43.24 E-value=95 Score=28.47 Aligned_cols=55 Identities=11% Similarity=0.082 Sum_probs=36.1
Q ss_pred HHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCC
Q 038976 120 FLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLT 179 (220)
Q Consensus 120 fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~ 179 (220)
.|-+.+.+..+ ..||+.|+|+|-|+..+=.-..++.++... .+--.-++||.|..
T Consensus 207 ~LA~~L~~~~~-G~RpVtLvG~SLGarvI~~cL~~L~~~~~~----~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 207 VLADALLSRNQ-GERPVTLVGHSLGARVIYYCLLELAERKAF----GLVENVVLMGAPVP 261 (345)
T ss_pred HHHHHHHHhcC-CCCceEEEeecccHHHHHHHHHHHHhcccc----CeEeeEEEecCCCC
Confidence 34344444333 788999999999999888888888776321 23234455776664
No 191
>COG1647 Esterase/lipase [General function prediction only]
Probab=42.68 E-value=1.3e+02 Score=26.16 Aligned_cols=37 Identities=14% Similarity=0.101 Sum_probs=28.5
Q ss_pred CCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 134 NDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 134 ~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
..++++|-|.||...-.||.. .++|+|+.-.+-+...
T Consensus 85 ~eI~v~GlSmGGv~alkla~~------------~p~K~iv~m~a~~~~k 121 (243)
T COG1647 85 DEIAVVGLSMGGVFALKLAYH------------YPPKKIVPMCAPVNVK 121 (243)
T ss_pred CeEEEEeecchhHHHHHHHhh------------CCccceeeecCCcccc
Confidence 469999999999887777744 5688888777766543
No 192
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=42.56 E-value=69 Score=29.03 Aligned_cols=82 Identities=17% Similarity=0.101 Sum_probs=48.1
Q ss_pred ccccccceeEEeCCCCcccccccCCCcc-cccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHc
Q 038976 79 GWDKASNLLYVDQPTGTGFSYTSDKRDI-RHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHN 157 (220)
Q Consensus 79 sW~~~anvlfiDqP~G~GfSy~~~~~~~-~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~ 157 (220)
+..+++-+..||+| |--.--..-..++ -.+.++.|+++...|+.| .++ -+.=+|+--|......+|..-.
T Consensus 74 ei~~~fcv~HV~~P-Gqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f-----~lk--~vIg~GvGAGAyIL~rFAl~hp- 144 (326)
T KOG2931|consen 74 EILEHFCVYHVDAP-GQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF-----GLK--SVIGMGVGAGAYILARFALNHP- 144 (326)
T ss_pred HHHhheEEEecCCC-ccccCCccCCCCCCCCCHHHHHHHHHHHHHhc-----Ccc--eEEEecccccHHHHHHHHhcCh-
Confidence 34556788899987 4221111111121 146677888888777444 343 4777788877665555554322
Q ss_pred cccCCCCceeeeeEEEEeccC
Q 038976 158 GNKAKEGIHINLKGFAIGNGL 178 (220)
Q Consensus 158 ~n~~~~~~~inLkGi~igng~ 178 (220)
-.+-|+++.|..
T Consensus 145 ---------~rV~GLvLIn~~ 156 (326)
T KOG2931|consen 145 ---------ERVLGLVLINCD 156 (326)
T ss_pred ---------hheeEEEEEecC
Confidence 347888988753
No 193
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=42.25 E-value=52 Score=32.74 Aligned_cols=60 Identities=18% Similarity=0.247 Sum_probs=44.7
Q ss_pred chHHHHHHHHHHHHHH-CCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 112 GVSNDLYDFLQAFFEE-HPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 112 ~~a~d~~~fl~~f~~~-~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
+.++++..+|++++.+ +-+-....+-|. |||-.-|.-+..|... -++.|+.||...+++.
T Consensus 575 e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~--------~diDG~LVGgASL~~~ 635 (645)
T PRK13962 575 EQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQ--------PDIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcC--------CCCCeEEeehHhcCHH
Confidence 3577889999999864 222212234444 9999999999999864 4689999999998875
No 194
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=40.72 E-value=24 Score=31.54 Aligned_cols=23 Identities=22% Similarity=0.245 Sum_probs=19.8
Q ss_pred CCEEEEeecCcccchhHHHHHHH
Q 038976 134 NDFYITGESYAGHYIPAFAARVH 156 (220)
Q Consensus 134 ~~~yi~GeSYgG~yvp~la~~i~ 156 (220)
.++-++|||-||+-+=++|....
T Consensus 120 ~klal~GHSrGGktAFAlALg~a 142 (307)
T PF07224_consen 120 SKLALSGHSRGGKTAFALALGYA 142 (307)
T ss_pred ceEEEeecCCccHHHHHHHhccc
Confidence 47999999999999988887664
No 195
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=40.53 E-value=32 Score=28.08 Aligned_cols=65 Identities=8% Similarity=0.139 Sum_probs=43.4
Q ss_pred cccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEE-EEeccCCC
Q 038976 109 NENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGF-AIGNGLTD 180 (220)
Q Consensus 109 ~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi-~igng~~d 180 (220)
+...-++++...|+++..+-|. .++.|+|.|=|+..+-..+.. ........-++.++ .+|||.-.
T Consensus 59 S~~~G~~~~~~~i~~~~~~CP~---~kivl~GYSQGA~V~~~~~~~----~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 59 SVAAGVANLVRLIEEYAARCPN---TKIVLAGYSQGAMVVGDALSG----DGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTT---SEEEEEEETHHHHHHHHHHHH----TTSSHHHHHHEEEEEEES-TTTB
T ss_pred cHHHHHHHHHHHHHHHHHhCCC---CCEEEEecccccHHHHHHHHh----ccCChhhhhhEEEEEEecCCccc
Confidence 4455667888889898888773 489999999999887776666 00001112356664 68888664
No 196
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=40.34 E-value=23 Score=26.23 Aligned_cols=28 Identities=32% Similarity=0.603 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeecC
Q 038976 114 SNDLYDFLQAFFEEHPKLAENDFYITGESY 143 (220)
Q Consensus 114 a~d~~~fl~~f~~~~p~~~~~~~yi~GeSY 143 (220)
.-|++++.+.|+.+| |..+.+.+-|+||
T Consensus 6 DvdIYDAvRaflLr~--Y~~KrfIV~g~S~ 33 (100)
T PF07389_consen 6 DVDIYDAVRAFLLRH--YYDKRFIVYGRSN 33 (100)
T ss_pred chhHHHHHHHHHHHH--HccceEEEecchH
Confidence 347899999999884 6677899999998
No 197
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=39.61 E-value=28 Score=32.01 Aligned_cols=23 Identities=17% Similarity=0.244 Sum_probs=17.1
Q ss_pred CCCEEEEeecCcccchhHHHHHH
Q 038976 133 ENDFYITGESYAGHYIPAFAARV 155 (220)
Q Consensus 133 ~~~~yi~GeSYgG~yvp~la~~i 155 (220)
..++|++|-|=|...+=.||--|
T Consensus 121 GD~Iy~FGFSRGAf~aRVlagmi 143 (423)
T COG3673 121 GDEIYAFGFSRGAFSARVLAGMI 143 (423)
T ss_pred CCeEEEeeccchhHHHHHHHHHH
Confidence 45799999999876666665554
No 198
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=39.61 E-value=20 Score=29.93 Aligned_cols=29 Identities=28% Similarity=0.367 Sum_probs=24.6
Q ss_pred CCCCCCEEEEeecCcccchhHHHHHHHcc
Q 038976 130 KLAENDFYITGESYAGHYIPAFAARVHNG 158 (220)
Q Consensus 130 ~~~~~~~yi~GeSYgG~yvp~la~~i~~~ 158 (220)
....-|+.|-|+||||....++|.++...
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A~ 113 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQAP 113 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcCC
Confidence 45556899999999999999999998754
No 199
>PRK15492 triosephosphate isomerase; Provisional
Probab=39.16 E-value=74 Score=27.93 Aligned_cols=59 Identities=15% Similarity=0.222 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHHH-CCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChhc
Q 038976 113 VSNDLYDFLQAFFEE-HPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGV 183 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~-~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~~ 183 (220)
.+++...++++++.+ +.+- ...+-|. |||-.-|.-+..|... -++.|+.||..-+|+..
T Consensus 190 ~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~--------~diDG~LvG~aSl~~~~ 249 (260)
T PRK15492 190 YADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQ--------PHIDGLFIGRSAWDADK 249 (260)
T ss_pred HHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcC--------CCCCEEEeehhhcCHHH
Confidence 456778889998753 3222 2345555 9999999999999864 46899999999998763
No 200
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=38.91 E-value=41 Score=33.49 Aligned_cols=83 Identities=13% Similarity=0.123 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHHHHHCCCCCCC-CEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChhcccc-----
Q 038976 113 VSNDLYDFLQAFFEEHPKLAEN-DFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGVQYK----- 186 (220)
Q Consensus 113 ~a~d~~~fl~~f~~~~p~~~~~-~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~~q~~----- 186 (220)
+-.|+.+.-+...+. .|..+ .+++.|-|.||+.+-++++.= .--++||+.--|++|+...+.
T Consensus 507 Tf~DFIa~a~~Lv~~--g~~~~~~i~a~GGSAGGmLmGav~N~~----------P~lf~~iiA~VPFVDvltTMlD~slP 574 (682)
T COG1770 507 TFTDFIAAARHLVKE--GYTSPDRIVAIGGSAGGMLMGAVANMA----------PDLFAGIIAQVPFVDVLTTMLDPSLP 574 (682)
T ss_pred cHHHHHHHHHHHHHc--CcCCccceEEeccCchhHHHHHHHhhC----------hhhhhheeecCCccchhhhhcCCCCC
Confidence 445776666555443 45444 699999999999887776441 123899999999999875542
Q ss_pred -chhHHH-HhCCCCCHHHHHHHHh
Q 038976 187 -AYPDYA-LDMGIINKSQYNRISK 208 (220)
Q Consensus 187 -~~~~~~-~~~gli~~~~~~~~~~ 208 (220)
+..++. |.+-. +++.|+-|+.
T Consensus 575 LT~~E~~EWGNP~-d~e~y~yikS 597 (682)
T COG1770 575 LTVTEWDEWGNPL-DPEYYDYIKS 597 (682)
T ss_pred CCccchhhhCCcC-CHHHHHHHhh
Confidence 123333 23434 8888887764
No 201
>COG4425 Predicted membrane protein [Function unknown]
Probab=38.70 E-value=44 Score=32.08 Aligned_cols=35 Identities=20% Similarity=0.515 Sum_probs=28.8
Q ss_pred chHHHHHHHHHHHHHHCCCCCCCCEEEEeecCccc
Q 038976 112 GVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGH 146 (220)
Q Consensus 112 ~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~ 146 (220)
.+|+.+.+.+-.+..+-|+=..-|+|+.|||-|..
T Consensus 375 ~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 375 DAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred hHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 36677788888888888988877899999998754
No 202
>PRK11524 putative methyltransferase; Provisional
Probab=38.07 E-value=1.2e+02 Score=26.41 Aligned_cols=51 Identities=20% Similarity=0.394 Sum_probs=28.8
Q ss_pred ccceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHC-CCCCCC-CEEEE
Q 038976 83 ASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEH-PKLAEN-DFYIT 139 (220)
Q Consensus 83 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~-p~~~~~-~~yi~ 139 (220)
-.++|+.|+|-++|..|....... ..++...++..|+... .-++.. .+||.
T Consensus 27 siDlIitDPPY~~~~~~~~~~~~~------~~~~~~~~l~~~l~~~~rvLK~~G~i~i~ 79 (284)
T PRK11524 27 SVDLIFADPPYNIGKNFDGLIEAW------KEDLFIDWLYEWIDECHRVLKKQGTMYIM 79 (284)
T ss_pred cccEEEECCCcccccccccccccc------cHHHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 479999999988876654322111 1234555666666542 223332 36665
No 203
>PTZ00333 triosephosphate isomerase; Provisional
Probab=37.99 E-value=64 Score=28.23 Aligned_cols=59 Identities=15% Similarity=0.290 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHHHHH-CCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCCh
Q 038976 112 GVSNDLYDFLQAFFEE-HPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDP 181 (220)
Q Consensus 112 ~~a~d~~~fl~~f~~~-~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp 181 (220)
+.++++..++++++.+ +.......+-|. |||-.-|.-+..|... .++.|+.||.+.+++
T Consensus 183 e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~--------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 183 EQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ--------PDIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEehHhhhh
Confidence 3567888899998864 322223344454 9999999999998753 468999999998874
No 204
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=37.33 E-value=34 Score=32.67 Aligned_cols=41 Identities=17% Similarity=0.170 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHH-CCCCCCCCEEEEeecCcccchhHHHHHHH
Q 038976 116 DLYDFLQAFFEE-HPKLAENDFYITGESYAGHYIPAFAARVH 156 (220)
Q Consensus 116 d~~~fl~~f~~~-~p~~~~~~~yi~GeSYgG~yvp~la~~i~ 156 (220)
+.+.-|+..++. +.....+|+.|++||.||.|+-.+-....
T Consensus 163 ~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~ 204 (473)
T KOG2369|consen 163 QYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVE 204 (473)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhccc
Confidence 333444444443 22344489999999999999877655544
No 205
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=37.14 E-value=45 Score=19.38 Aligned_cols=20 Identities=20% Similarity=0.288 Sum_probs=16.4
Q ss_pred HHHHhCCCCCHHHHHHHHhh
Q 038976 190 DYALDMGIINKSQYNRISKI 209 (220)
Q Consensus 190 ~~~~~~gli~~~~~~~~~~~ 209 (220)
.-++..|+|+++.|++.++.
T Consensus 9 ~~l~~~G~IseeEy~~~k~~ 28 (31)
T PF09851_consen 9 KELYDKGEISEEEYEQKKAR 28 (31)
T ss_pred HHHHHcCCCCHHHHHHHHHH
Confidence 34678999999999988764
No 206
>COG3596 Predicted GTPase [General function prediction only]
Probab=36.48 E-value=61 Score=29.07 Aligned_cols=62 Identities=31% Similarity=0.355 Sum_probs=36.7
Q ss_pred CCCEEEEEcC--CCChHHHh-HHhhhc-CCeEEcCCCceeecccccccc--cceeEEeCCCCcccccccC
Q 038976 39 KDPVVIWLTG--GPGCSSEL-AVFYEN-GPFSIADNMSLVWNEHGWDKA--SNLLYVDQPTGTGFSYTSD 102 (220)
Q Consensus 39 ~~Pl~lwlnG--GPG~SS~~-g~~~e~-GP~~i~~~~~l~~n~~sW~~~--anvlfiDqP~G~GfSy~~~ 102 (220)
..|+.+.+-| |-|=||++ .+|..+ =|...- .....+-.+.|... -||..||.| |.|=+-..+
T Consensus 37 ~~pvnvLi~G~TG~GKSSliNALF~~~~~~v~~v-g~~t~~~~~~~~~~~~~~l~lwDtP-G~gdg~~~D 104 (296)
T COG3596 37 KEPVNVLLMGATGAGKSSLINALFQGEVKEVSKV-GVGTDITTRLRLSYDGENLVLWDTP-GLGDGKDKD 104 (296)
T ss_pred cCceeEEEecCCCCcHHHHHHHHHhccCceeeec-ccCCCchhhHHhhccccceEEecCC-Ccccchhhh
Confidence 5799999999 55558876 555432 232211 11122233445443 589999998 999775433
No 207
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=34.89 E-value=16 Score=31.71 Aligned_cols=60 Identities=18% Similarity=0.307 Sum_probs=40.8
Q ss_pred chHHHHHHHHHHHHHH-CCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 112 GVSNDLYDFLQAFFEE-HPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 112 ~~a~d~~~fl~~f~~~-~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
+.++.+..+|++++.+ +..-..+++-|. |||-.-|.-+..+... .++.|+.||.+.+++.
T Consensus 178 ~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~asl~~~ 238 (244)
T PF00121_consen 178 EQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLSQ--------PDIDGVLVGGASLKAE 238 (244)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHTS--------TT-SEEEESGGGGSTH
T ss_pred HHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhcC--------CCCCEEEEchhhhccc
Confidence 3567888888888754 211112234443 7888888888888753 4689999999999876
No 208
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=34.35 E-value=67 Score=28.96 Aligned_cols=44 Identities=9% Similarity=0.187 Sum_probs=32.9
Q ss_pred ccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHH
Q 038976 110 ENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVH 156 (220)
Q Consensus 110 ~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~ 156 (220)
....++.+...+.+-+.. ...+++.|+|||.||.-+..++..+.
T Consensus 106 ~~~~~~ql~~~V~~~l~~---~ga~~v~LigHS~GG~~~ry~~~~~~ 149 (336)
T COG1075 106 LAVRGEQLFAYVDEVLAK---TGAKKVNLIGHSMGGLDSRYYLGVLG 149 (336)
T ss_pred ccccHHHHHHHHHHHHhh---cCCCceEEEeecccchhhHHHHhhcC
Confidence 344566777777777665 44478999999999999997777665
No 209
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=34.14 E-value=46 Score=29.41 Aligned_cols=36 Identities=22% Similarity=0.434 Sum_probs=21.4
Q ss_pred HHHHHHHHH----HHHHHCCCCCCCCEEEEeecCcccchh
Q 038976 114 SNDLYDFLQ----AFFEEHPKLAENDFYITGESYAGHYIP 149 (220)
Q Consensus 114 a~d~~~fl~----~f~~~~p~~~~~~~yi~GeSYgG~yvp 149 (220)
++.+.+||. =|.++-=+.++.+--|+|||+||..+-
T Consensus 113 ~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl 152 (264)
T COG2819 113 GDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVL 152 (264)
T ss_pred hHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHH
Confidence 344445543 344431123344589999999998774
No 210
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=33.75 E-value=1.2e+02 Score=25.34 Aligned_cols=50 Identities=14% Similarity=0.161 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccC
Q 038976 115 NDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGL 178 (220)
Q Consensus 115 ~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~ 178 (220)
+|-.+.|.+-.. ...++.||++||.|..-+...+.++.. .++|+++..|.
T Consensus 44 ~dWi~~l~~~v~----a~~~~~vlVAHSLGc~~v~h~~~~~~~----------~V~GalLVApp 93 (181)
T COG3545 44 DDWIARLEKEVN----AAEGPVVLVAHSLGCATVAHWAEHIQR----------QVAGALLVAPP 93 (181)
T ss_pred HHHHHHHHHHHh----ccCCCeEEEEecccHHHHHHHHHhhhh----------ccceEEEecCC
Confidence 444444544443 235689999999997555444444332 57777776653
No 211
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=33.57 E-value=1.6e+02 Score=28.02 Aligned_cols=88 Identities=22% Similarity=0.112 Sum_probs=55.9
Q ss_pred CCCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchHHHH
Q 038976 38 KKDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDL 117 (220)
Q Consensus 38 ~~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~ 117 (220)
.++|+||...|= +.|. .|.+- +-+=.=.+|.|+|+. +=-|=|.....+=..-+.+|+|.|.
T Consensus 61 ~drPtV~~T~GY-~~~~--------~p~r~---------Ept~Lld~NQl~vEh-RfF~~SrP~p~DW~~Lti~QAA~D~ 121 (448)
T PF05576_consen 61 FDRPTVLYTEGY-NVST--------SPRRS---------EPTQLLDGNQLSVEH-RFFGPSRPEPADWSYLTIWQAASDQ 121 (448)
T ss_pred CCCCeEEEecCc-cccc--------Ccccc---------chhHhhccceEEEEE-eeccCCCCCCCCcccccHhHhhHHH
Confidence 388999998773 2221 13321 111122468899997 5555565444321224678999999
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeecCcccch
Q 038976 118 YDFLQAFFEEHPKLAENDFYITGESYAGHYI 148 (220)
Q Consensus 118 ~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yv 148 (220)
...++.|-.. |. .++.-+|-|=||+-.
T Consensus 122 Hri~~A~K~i---Y~-~kWISTG~SKGGmTa 148 (448)
T PF05576_consen 122 HRIVQAFKPI---YP-GKWISTGGSKGGMTA 148 (448)
T ss_pred HHHHHHHHhh---cc-CCceecCcCCCceeE
Confidence 9988888443 43 379999999999854
No 212
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=33.46 E-value=1.8e+02 Score=27.49 Aligned_cols=99 Identities=24% Similarity=0.425 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCCChHHHhHHhhhcCCeEEcCCCceeecccccc--cccceeEEeCCCCcccccccCCCcccccccchHHH
Q 038976 39 KDPVVIWLTGGPGCSSELAVFYENGPFSIADNMSLVWNEHGWD--KASNLLYVDQPTGTGFSYTSDKRDIRHNENGVSND 116 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~SS~~g~~~e~GP~~i~~~~~l~~n~~sW~--~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d 116 (220)
-.|++ .+||=||+--- |..+=|..-++ +.++-. -.+.||----| |-|||-.....+. +..++|.
T Consensus 152 v~PlL-l~HGwPGsv~E---FykfIPlLT~p------~~hg~~~d~~FEVI~PSlP-GygwSd~~sk~GF--n~~a~Ar- 217 (469)
T KOG2565|consen 152 VKPLL-LLHGWPGSVRE---FYKFIPLLTDP------KRHGNESDYAFEVIAPSLP-GYGWSDAPSKTGF--NAAATAR- 217 (469)
T ss_pred ccceE-EecCCCchHHH---HHhhhhhhcCc------cccCCccceeEEEeccCCC-CcccCcCCccCCc--cHHHHHH-
Confidence 34655 57999996432 11222433222 111111 13355544444 8999876554432 2333333
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHc
Q 038976 117 LYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHN 157 (220)
Q Consensus 117 ~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~ 157 (220)
.+++..- ++.-+++||-|--||......+|.-..+
T Consensus 218 ---vmrkLMl---RLg~nkffiqGgDwGSiI~snlasLyPe 252 (469)
T KOG2565|consen 218 ---VMRKLML---RLGYNKFFIQGGDWGSIIGSNLASLYPE 252 (469)
T ss_pred ---HHHHHHH---HhCcceeEeecCchHHHHHHHHHhhcch
Confidence 3334434 3556789999988999888888766543
No 213
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=33.38 E-value=20 Score=32.45 Aligned_cols=25 Identities=20% Similarity=0.405 Sum_probs=18.7
Q ss_pred CCCCCCEEEEeecCcccchhHHHHH
Q 038976 130 KLAENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 130 ~~~~~~~yi~GeSYgG~yvp~la~~ 154 (220)
.|-...++++|||-||..+..+..+
T Consensus 272 ~Ypda~iwlTGHSLGGa~AsLlG~~ 296 (425)
T COG5153 272 IYPDARIWLTGHSLGGAIASLLGIR 296 (425)
T ss_pred hCCCceEEEeccccchHHHHHhccc
Confidence 3445579999999999887765443
No 214
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=33.38 E-value=20 Score=32.45 Aligned_cols=25 Identities=20% Similarity=0.405 Sum_probs=18.7
Q ss_pred CCCCCCEEEEeecCcccchhHHHHH
Q 038976 130 KLAENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 130 ~~~~~~~yi~GeSYgG~yvp~la~~ 154 (220)
.|-...++++|||-||..+..+..+
T Consensus 272 ~Ypda~iwlTGHSLGGa~AsLlG~~ 296 (425)
T KOG4540|consen 272 IYPDARIWLTGHSLGGAIASLLGIR 296 (425)
T ss_pred hCCCceEEEeccccchHHHHHhccc
Confidence 3445579999999999887765443
No 215
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.00 E-value=1.5e+02 Score=27.59 Aligned_cols=64 Identities=9% Similarity=0.116 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChh
Q 038976 114 SNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPG 182 (220)
Q Consensus 114 a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~ 182 (220)
..++-.+| ..+.+-+. -+++||+.||+|.--+-....++.-++.. .....++-|++-.|-+|-.
T Consensus 174 r~aLe~~l-r~La~~~~--~~~I~ilAHSMGtwl~~e~LrQLai~~~~--~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 174 RPALERLL-RYLATDKP--VKRIYLLAHSMGTWLLMEALRQLAIRADR--PLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred HHHHHHHH-HHHHhCCC--CceEEEEEecchHHHHHHHHHHHhccCCc--chhhhhhheEeeCCCCChh
Confidence 34444444 33343222 34799999999877666666666544322 1346788999999988865
No 216
>PRK06762 hypothetical protein; Provisional
Probab=31.14 E-value=30 Score=27.19 Aligned_cols=13 Identities=23% Similarity=0.544 Sum_probs=11.7
Q ss_pred CEEEEEcCCCChH
Q 038976 41 PVVIWLTGGPGCS 53 (220)
Q Consensus 41 Pl~lwlnGGPG~S 53 (220)
|.++|+.|.||+-
T Consensus 2 ~~li~i~G~~GsG 14 (166)
T PRK06762 2 TTLIIIRGNSGSG 14 (166)
T ss_pred CeEEEEECCCCCC
Confidence 7899999999984
No 217
>TIGR03282 methan_mark_13 putative methanogenesis marker 13 metalloprotein. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. This metal cluster-binding family is related to nitrogenase structural protein NifD and accessory protein NifE, among others.
Probab=30.77 E-value=4.3e+02 Score=24.38 Aligned_cols=91 Identities=14% Similarity=0.167 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChhccccchhHHHH
Q 038976 114 SNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGVQYKAYPDYAL 193 (220)
Q Consensus 114 a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~~q~~~~~~~~~ 193 (220)
.+.+.+.|++-.+++ +.+-+.|.+-.-.+...--+-.-+.+.. ..+++-.|-.-+|+-|...-+....+-+.
T Consensus 60 eeKL~eaI~ea~e~y---~P~lI~VvTTCvseIIGDDIeaVvkE~~-----~giPVI~V~t~GGfGdn~~G~~~aLeAii 131 (352)
T TIGR03282 60 SEKLVKVIRYAEEKF---KPELIGVVGTCASMIIGEDLKEAVDEAD-----VDAEVIAVEVHAGFGDNTEGVIATLESAA 131 (352)
T ss_pred HHHHHHHHHHHHHhc---CCCEEEEECCCchhhccCCHHHHHHHhC-----CCCCEEEEECCCCCccHHHHHHHHHHHHH
Confidence 345666776666653 3333666655444443333333222211 11223222222333233322222344566
Q ss_pred hCCCCCHHHHHHHHhhhHH
Q 038976 194 DMGIINKSQYNRISKIIPV 212 (220)
Q Consensus 194 ~~gli~~~~~~~~~~~~~~ 212 (220)
..|+|+++++++=+++..+
T Consensus 132 dq~~i~~~e~~rq~~~l~~ 150 (352)
T TIGR03282 132 EAGIIDEDEVERQKELLKK 150 (352)
T ss_pred HhCCcCHHHHHHHHHHHHH
Confidence 7899999988766655443
No 218
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=30.65 E-value=1.7e+02 Score=27.50 Aligned_cols=40 Identities=18% Similarity=0.244 Sum_probs=29.7
Q ss_pred CCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCC
Q 038976 130 KLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTD 180 (220)
Q Consensus 130 ~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~d 180 (220)
.|+..++.|.|-|-||.-+...|.- .-++|++++-.-+=|
T Consensus 307 gf~~edIilygWSIGGF~~~waAs~-----------YPdVkavvLDAtFDD 346 (517)
T KOG1553|consen 307 GFRQEDIILYGWSIGGFPVAWAASN-----------YPDVKAVVLDATFDD 346 (517)
T ss_pred CCCccceEEEEeecCCchHHHHhhc-----------CCCceEEEeecchhh
Confidence 6778899999999999987766643 356888877544433
No 219
>TIGR01618 phage_P_loop phage nucleotide-binding protein. This model represents an uncharacterized family of proteins from a number of phage of Gram-positive bacteria. This protein contains a P-loop motif, G/A-X-X-G-X-G-K-T near its amino end. The function of this protein is unknown.
Probab=29.84 E-value=81 Score=26.91 Aligned_cols=38 Identities=18% Similarity=0.328 Sum_probs=23.0
Q ss_pred EEecCCCCCCEEEEEcCCCChH-HHhHHhhhcCCeEEcC
Q 038976 32 FESRNSKKDPVVIWLTGGPGCS-SELAVFYENGPFSIAD 69 (220)
Q Consensus 32 ~~s~~~~~~Pl~lwlnGGPG~S-S~~g~~~e~GP~~i~~ 69 (220)
+++.+-+..|..+++.|-||+- |.........|+.++.
T Consensus 3 ~~~~~~~~~~~~~liyG~~G~GKtt~a~~~~~~~~~~~~ 41 (220)
T TIGR01618 3 IEAGNIKRIPNMYLIYGKPGTGKTSTIKYLPGKTLVLSF 41 (220)
T ss_pred ccccccCCCCcEEEEECCCCCCHHHHHHhcCCCCEEEec
Confidence 3444334568889999999985 3344344444666653
No 220
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=27.73 E-value=37 Score=21.05 Aligned_cols=12 Identities=42% Similarity=1.102 Sum_probs=6.3
Q ss_pred CCEEEEEcCCCC
Q 038976 40 DPVVIWLTGGPG 51 (220)
Q Consensus 40 ~Pl~lwlnGGPG 51 (220)
.--.||++|-||
T Consensus 24 ~gRTiWFqGdPG 35 (39)
T PF09292_consen 24 NGRTIWFQGDPG 35 (39)
T ss_dssp TS-EEEESS---
T ss_pred CCCEEEeeCCCC
Confidence 345789999887
No 221
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=27.52 E-value=56 Score=22.11 Aligned_cols=23 Identities=26% Similarity=0.550 Sum_probs=19.4
Q ss_pred chHHHHHHHHHHHHHHCCCCCCC
Q 038976 112 GVSNDLYDFLQAFFEEHPKLAEN 134 (220)
Q Consensus 112 ~~a~d~~~fl~~f~~~~p~~~~~ 134 (220)
+.-+++.+.++.|++.||.+.+.
T Consensus 5 eiPe~L~~~m~~fie~hP~WDQ~ 27 (57)
T PF10929_consen 5 EIPEDLHQAMKDFIETHPNWDQY 27 (57)
T ss_pred cccHHHHHHHHHHHHcCCCchHH
Confidence 35578999999999999999764
No 222
>PRK10949 protease 4; Provisional
Probab=27.49 E-value=92 Score=30.83 Aligned_cols=69 Identities=22% Similarity=0.367 Sum_probs=44.2
Q ss_pred ceeEEeCCCCcccccccCCCcccccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCc--ccchhHHHHHHHccccCC
Q 038976 85 NLLYVDQPTGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYA--GHYIPAFAARVHNGNKAK 162 (220)
Q Consensus 85 nvlfiDqP~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYg--G~yvp~la~~i~~~n~~~ 162 (220)
=+|.+|.|.|.+.. ..+.+.+.|++|-+. ++|++..|++|+ +.|+...|.+|.-+..
T Consensus 116 ivL~i~s~gG~~~a--------------~~~eI~~ai~~fk~s-----GKpVvA~~~~~~s~~YyLASaAD~I~l~P~-- 174 (618)
T PRK10949 116 IVLDLKNFAGADQP--------------SMQYIGKALREFRDS-----GKPVYAVGDSYSQGQYYLASFANKIYLSPQ-- 174 (618)
T ss_pred EEEEeCCCCCccHH--------------HHHHHHHHHHHHHHh-----CCeEEEEecCccchhhhhhhhCCEEEECCC--
Confidence 36677776554322 235677778777432 568999999986 6777777777765432
Q ss_pred CCceeeeeEEEEec
Q 038976 163 EGIHINLKGFAIGN 176 (220)
Q Consensus 163 ~~~~inLkGi~ign 176 (220)
-.+.+.|++..+
T Consensus 175 --G~v~~~G~~~~~ 186 (618)
T PRK10949 175 --GVVDLHGFATNG 186 (618)
T ss_pred --ceEEEeeeecch
Confidence 136667766653
No 223
>TIGR03598 GTPase_YsxC ribosome biogenesis GTP-binding protein YsxC/EngB. Members of this protein family are a GTPase associated with ribosome biogenesis, typified by YsxC from Bacillus subutilis. The family is widely but not universally distributed among bacteria. Members commonly are called EngB based on homology to EngA, one of several other GTPases of ribosome biogenesis. Cutoffs as set find essentially all bacterial members, but also identify large numbers of eukaryotic (probably organellar) sequences. This protein is found in about 80 percent of bacterial genomes.
Probab=26.83 E-value=3.1e+02 Score=21.48 Aligned_cols=57 Identities=19% Similarity=0.233 Sum_probs=28.9
Q ss_pred CCCEEEEEcCCCCh--HHHhHHhhhcC-CeEEcCC--CceeecccccccccceeEEeCCCCcccc
Q 038976 39 KDPVVIWLTGGPGC--SSELAVFYENG-PFSIADN--MSLVWNEHGWDKASNLLYVDQPTGTGFS 98 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~--SS~~g~~~e~G-P~~i~~~--~~l~~n~~sW~~~anvlfiDqP~G~GfS 98 (220)
++..-+-+-|-||+ ||+.-.+.... .-.+.+. .+....-+.++ -++.+||.| |.|.+
T Consensus 16 ~~~~~i~ivG~~~~GKStlin~l~~~~~~~~~~~~~~~t~~~~~~~~~--~~~~liDtp-G~~~~ 77 (179)
T TIGR03598 16 DDGPEIAFAGRSNVGKSSLINALTNRKKLARTSKTPGRTQLINFFEVN--DGFRLVDLP-GYGYA 77 (179)
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHhCCCCcccccCCCCcceEEEEEEeC--CcEEEEeCC-CCccc
Confidence 45556667777765 67665554331 1112111 11112222222 278999997 76654
No 224
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=26.76 E-value=57 Score=32.33 Aligned_cols=22 Identities=14% Similarity=0.134 Sum_probs=18.2
Q ss_pred CCCEEEEeecCcccchhHHHHH
Q 038976 133 ENDFYITGESYAGHYIPAFAAR 154 (220)
Q Consensus 133 ~~~~yi~GeSYgG~yvp~la~~ 154 (220)
++++.|+|||+||.++=.+-..
T Consensus 212 gkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHh
Confidence 5789999999999887776554
No 225
>COG0149 TpiA Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=26.38 E-value=2.1e+02 Score=25.13 Aligned_cols=75 Identities=20% Similarity=0.293 Sum_probs=51.1
Q ss_pred eeEEeCC--CCcccccccCCCcccccccchHHHHHHHHHHHHHH-CCCCCCCCEEEEeecCcccchhHHHHHHHccccCC
Q 038976 86 LLYVDQP--TGTGFSYTSDKRDIRHNENGVSNDLYDFLQAFFEE-HPKLAENDFYITGESYAGHYIPAFAARVHNGNKAK 162 (220)
Q Consensus 86 vlfiDqP--~G~GfSy~~~~~~~~~~~~~~a~d~~~fl~~f~~~-~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~ 162 (220)
+|=.+|| +|||.|-+ ...++.+..|++..... +.+- .++-|. |||-.=|.=+.++..+
T Consensus 162 vIAYEPvWAIGTG~~at----------~~~a~~v~~~Ir~~~~~~~~~~--~~v~Il---YGGSV~~~N~~e~~~~---- 222 (251)
T COG0149 162 VIAYEPVWAIGTGKSAS----------PADAEEVHAFIRAVLAELFGAE--EKVRIL---YGGSVKPGNAAELAAQ---- 222 (251)
T ss_pred EEEECCHHHhcCCCCCC----------HHHHHHHHHHHHHHHHHhcCCC--CCeEEE---EeCCcChhHHHHHhcC----
Confidence 4445532 58887632 22466778888888875 2222 345555 8888888888887743
Q ss_pred CCceeeeeEEEEeccCCChhc
Q 038976 163 EGIHINLKGFAIGNGLTDPGV 183 (220)
Q Consensus 163 ~~~~inLkGi~igng~~dp~~ 183 (220)
.+++|+.||++.+++..
T Consensus 223 ----~~idG~LVGgAslka~~ 239 (251)
T COG0149 223 ----PDIDGALVGGASLKADD 239 (251)
T ss_pred ----CCCCeEEEcceeecchh
Confidence 57999999999998654
No 226
>PLN02633 palmitoyl protein thioesterase family protein
Probab=26.26 E-value=2.4e+02 Score=25.61 Aligned_cols=44 Identities=9% Similarity=0.084 Sum_probs=29.2
Q ss_pred cccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHc
Q 038976 109 NENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHN 157 (220)
Q Consensus 109 ~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~ 157 (220)
+..+.++.+.+.| +..|++. +-+.++|.|=||...=.++++...
T Consensus 74 ~~~~Qve~vce~l----~~~~~l~-~G~naIGfSQGGlflRa~ierc~~ 117 (314)
T PLN02633 74 PLTQQAEIACEKV----KQMKELS-QGYNIVGRSQGNLVARGLIEFCDG 117 (314)
T ss_pred CHHHHHHHHHHHH----hhchhhh-CcEEEEEEccchHHHHHHHHHCCC
Confidence 3344444444444 4456775 479999999999887777777654
No 227
>COG0218 Predicted GTPase [General function prediction only]
Probab=26.14 E-value=1.2e+02 Score=25.71 Aligned_cols=80 Identities=18% Similarity=0.264 Sum_probs=46.8
Q ss_pred CCCEEEEEcCC-CChHHHhHHhhh-cCCeEEc--CCCceeecccccccccceeEEeCCCCcccccccCCCcccccccchH
Q 038976 39 KDPVVIWLTGG-PGCSSELAVFYE-NGPFSIA--DNMSLVWNEHGWDKASNLLYVDQPTGTGFSYTSDKRDIRHNENGVS 114 (220)
Q Consensus 39 ~~Pl~lwlnGG-PG~SS~~g~~~e-~GP~~i~--~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~a 114 (220)
+-|=|.++-.- =|=||++-.+.. -.=-++. ++.+...|-+.|.+. +.+||-| |-||.-... ...
T Consensus 23 ~~~EIaF~GRSNVGKSSlIN~l~~~k~LArtSktPGrTq~iNff~~~~~--~~lVDlP-GYGyAkv~k---------~~~ 90 (200)
T COG0218 23 DLPEIAFAGRSNVGKSSLINALTNQKNLARTSKTPGRTQLINFFEVDDE--LRLVDLP-GYGYAKVPK---------EVK 90 (200)
T ss_pred CCcEEEEEccCcccHHHHHHHHhCCcceeecCCCCCccceeEEEEecCc--EEEEeCC-CcccccCCH---------HHH
Confidence 45666666332 266887655543 2222332 245667788877776 8899998 888764321 234
Q ss_pred HHHHHHHHHHHHHCCC
Q 038976 115 NDLYDFLQAFFEEHPK 130 (220)
Q Consensus 115 ~d~~~fl~~f~~~~p~ 130 (220)
+..-.++.+|++..-+
T Consensus 91 e~w~~~i~~YL~~R~~ 106 (200)
T COG0218 91 EKWKKLIEEYLEKRAN 106 (200)
T ss_pred HHHHHHHHHHHhhchh
Confidence 4555666677665333
No 228
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=24.76 E-value=58 Score=29.70 Aligned_cols=45 Identities=20% Similarity=0.331 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHCCCCC----CCCEEEEeecCcccchhHHHHHHHccc
Q 038976 115 NDLYDFLQAFFEEHPKLA----ENDFYITGESYAGHYIPAFAARVHNGN 159 (220)
Q Consensus 115 ~d~~~fl~~f~~~~p~~~----~~~~yi~GeSYgG~yvp~la~~i~~~n 159 (220)
.-+.+.|.-|++.+|+-. .+-+||+=.--||.-|+.+|.+..+.-
T Consensus 192 ~gLld~lkpfLdyyp~v~gv~frkaIFIfLSN~gg~eI~~~aL~~~~~g 240 (344)
T KOG2170|consen 192 PGLLDVLKPFLDYYPQVSGVDFRKAIFIFLSNAGGSEIARIALENARNG 240 (344)
T ss_pred HhHHHHHhhhhccccccccccccceEEEEEcCCcchHHHHHHHHHHHcC
Confidence 456788888888666543 224777766678888888888877643
No 229
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=24.03 E-value=2.8e+02 Score=20.58 Aligned_cols=37 Identities=22% Similarity=0.418 Sum_probs=26.5
Q ss_pred HHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHHHccc
Q 038976 118 YDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARVHNGN 159 (220)
Q Consensus 118 ~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n 159 (220)
...|++.++.||+. +|.++|.| |.-=|.+-..|.+..
T Consensus 52 ~~~i~~i~~~fP~~---kfiLIGDs--gq~DpeiY~~ia~~~ 88 (100)
T PF09949_consen 52 RDNIERILRDFPER---KFILIGDS--GQHDPEIYAEIARRF 88 (100)
T ss_pred HHHHHHHHHHCCCC---cEEEEeeC--CCcCHHHHHHHHHHC
Confidence 34566777888855 79999999 555577777777653
No 230
>PF12532 DUF3732: Protein of unknown function (DUF3732); InterPro: IPR022205 This domain family is found in bacteria and eukaryotes, and is typically between 180 and 198 amino acids in length. There is a conserved DQP sequence motif.
Probab=23.70 E-value=1.2e+02 Score=25.31 Aligned_cols=60 Identities=17% Similarity=0.382 Sum_probs=33.1
Q ss_pred ccceeEEeCCCCcccccccCCCc-----c--cccccchHHHHHHHHHHHHHHC-CCCCCCCEEEEeecC
Q 038976 83 ASNLLYVDQPTGTGFSYTSDKRD-----I--RHNENGVSNDLYDFLQAFFEEH-PKLAENDFYITGESY 143 (220)
Q Consensus 83 ~anvlfiDqP~G~GfSy~~~~~~-----~--~~~~~~~a~d~~~fl~~f~~~~-p~~~~~~~yi~GeSY 143 (220)
+.++|++|||..+=|.-...... . ..++..+...+..+|-.|..+- +++ .-++.|+=|.+
T Consensus 100 VP~fL~lDQPSQvYfp~~~~~~~~~~~~~~~~d~D~~aV~~~F~~L~~~~~~~~~~~-~~QiIV~eHAd 167 (193)
T PF12532_consen 100 VPSFLFLDQPSQVYFPSRDKSEDFDEEELRERDEDIAAVRKMFSLLADFIKEIEKEY-GFQIIVLEHAD 167 (193)
T ss_pred CCCeeeecCCCcCcCCCcccccccchhhccccchHHHHHHHHHHHHHHHHHHhcccc-CccEEEEeccc
Confidence 44899999998876665111111 1 1123334566677777777652 222 23466665544
No 231
>PRK14905 triosephosphate isomerase/PTS system glucose/sucrose-specific transporter subunit IIB; Provisional
Probab=23.21 E-value=1.8e+02 Score=26.73 Aligned_cols=60 Identities=13% Similarity=0.159 Sum_probs=43.7
Q ss_pred chHHHHHHHHHHHHHH-CCCCCCCCEEEEeecCcccchhHHHHHHHccccCCCCceeeeeEEEEeccCCChhc
Q 038976 112 GVSNDLYDFLQAFFEE-HPKLAENDFYITGESYAGHYIPAFAARVHNGNKAKEGIHINLKGFAIGNGLTDPGV 183 (220)
Q Consensus 112 ~~a~d~~~fl~~f~~~-~p~~~~~~~yi~GeSYgG~yvp~la~~i~~~n~~~~~~~inLkGi~igng~~dp~~ 183 (220)
+.+++..+++++++.+ +-+- ...+-|. |||-.-|.-+.++... -++.|+.+|.+.+|+..
T Consensus 190 ~~~~~~~~~Ir~~l~~~~~~~-~~~v~IL---YGGSV~~~N~~~l~~~--------~~iDG~LVG~asl~~~~ 250 (355)
T PRK14905 190 EYADEKHAIIKQCLFELFAEE-SKKIPVL---YGGSVNLENANELIMK--------PHIDGLFIGRSAWDAQC 250 (355)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cCceeEE---EeCcCCHHHHHHHhcC--------CCCCEEEechhhccHHH
Confidence 3566788889988753 3222 2244444 9999999999998753 46899999999998764
No 232
>COG3896 Chloramphenicol 3-O-phosphotransferase [Defense mechanisms]
Probab=23.06 E-value=73 Score=26.56 Aligned_cols=28 Identities=29% Similarity=0.469 Sum_probs=20.7
Q ss_pred CCCEEEEEcCCC--ChHHHhHHhhhc--CCeE
Q 038976 39 KDPVVIWLTGGP--GCSSELAVFYEN--GPFS 66 (220)
Q Consensus 39 ~~Pl~lwlnGGP--G~SS~~g~~~e~--GP~~ 66 (220)
..--|+.||||| |=||+--.|+++ +|+.
T Consensus 21 ~~griVlLNG~~saGKSSiA~A~Q~~~a~pwm 52 (205)
T COG3896 21 PEGRIVLLNGGSSAGKSSIALAFQDLAAEPWM 52 (205)
T ss_pred CCceEEEecCCCccchhHHHHHHHHHhhcchh
Confidence 334577899998 558888888875 6764
No 233
>COG3150 Predicted esterase [General function prediction only]
Probab=22.67 E-value=71 Score=26.72 Aligned_cols=41 Identities=20% Similarity=0.305 Sum_probs=28.0
Q ss_pred ccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchhHHHHHH
Q 038976 108 HNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIPAFAARV 155 (220)
Q Consensus 108 ~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp~la~~i 155 (220)
.+..++++.+.+.+ . +...+..-|+|-|-||.|+-.|+.+-
T Consensus 40 h~p~~a~~ele~~i----~---~~~~~~p~ivGssLGGY~At~l~~~~ 80 (191)
T COG3150 40 HDPQQALKELEKAV----Q---ELGDESPLIVGSSLGGYYATWLGFLC 80 (191)
T ss_pred CCHHHHHHHHHHHH----H---HcCCCCceEEeecchHHHHHHHHHHh
Confidence 34455555554444 3 35556689999999999998887663
No 234
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=21.82 E-value=54 Score=26.52 Aligned_cols=14 Identities=50% Similarity=0.876 Sum_probs=11.1
Q ss_pred CCEEEEEcCCCChH
Q 038976 40 DPVVIWLTGGPGCS 53 (220)
Q Consensus 40 ~Pl~lwlnGGPG~S 53 (220)
+|.+|||.|=||+-
T Consensus 1 ~g~vIwltGlsGsG 14 (156)
T PF01583_consen 1 KGFVIWLTGLSGSG 14 (156)
T ss_dssp S-EEEEEESSTTSS
T ss_pred CCEEEEEECCCCCC
Confidence 58999999988863
No 235
>PRK14731 coaE dephospho-CoA kinase; Provisional
Probab=21.22 E-value=1.4e+02 Score=24.81 Aligned_cols=32 Identities=25% Similarity=0.290 Sum_probs=24.1
Q ss_pred CCCEEEEEcCCCCh--HHHhHHhhhcCCeEEcCC
Q 038976 39 KDPVVIWLTGGPGC--SSELAVFYENGPFSIADN 70 (220)
Q Consensus 39 ~~Pl~lwlnGGPG~--SS~~g~~~e~GP~~i~~~ 70 (220)
..|.++-+.||+|| |.+...|.+.|-..++.+
T Consensus 3 ~~~~~igitG~igsGKSt~~~~l~~~g~~v~d~D 36 (208)
T PRK14731 3 SLPFLVGVTGGIGSGKSTVCRFLAEMGCELFEAD 36 (208)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHCCCeEEecc
Confidence 35789999999998 456677778887776643
No 236
>smart00250 PLEC Plectin repeat.
Probab=21.20 E-value=44 Score=20.13 Aligned_cols=27 Identities=30% Similarity=0.444 Sum_probs=19.3
Q ss_pred ccCCChhccccchhHHHHhCCCCCHHH
Q 038976 176 NGLTDPGVQYKAYPDYALDMGIINKSQ 202 (220)
Q Consensus 176 ng~~dp~~q~~~~~~~~~~~gli~~~~ 202 (220)
.|.+||...-.--..=|.+.|+|+++.
T Consensus 11 ~Giidp~t~~~lsv~eA~~~glid~~~ 37 (38)
T smart00250 11 GGIIDPETGQKLSVEEALRRGLIDPET 37 (38)
T ss_pred eEEEcCCCCCCcCHHHHHHcCCCCccc
Confidence 466788766665566788889998753
No 237
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=21.01 E-value=2e+02 Score=17.73 Aligned_cols=26 Identities=15% Similarity=0.327 Sum_probs=11.2
Q ss_pred eEEEEEEEecCC-CCCCEEEEEcCCCC
Q 038976 26 KMFYFFFESRNS-KKDPVVIWLTGGPG 51 (220)
Q Consensus 26 ~lFy~~~~s~~~-~~~Pl~lwlnGGPG 51 (220)
+-+|||-.+... ....--+|+.+||+
T Consensus 12 NrYwwf~~s~~~~~~~~~~~~v~~~~~ 38 (38)
T PF15613_consen 12 NRYWWFSSSSSNSQYYNGGRFVEQGPD 38 (38)
T ss_pred ceEEEEecccccCCCCCceEEEEeCCC
Confidence 444555333322 23334445555564
No 238
>PRK05354 arginine decarboxylase; Provisional
Probab=20.41 E-value=7.1e+02 Score=24.83 Aligned_cols=59 Identities=25% Similarity=0.341 Sum_probs=35.4
Q ss_pred cceeEEeCCCCcccccccCCCcc------cccccchHHHHHHHHHHHHHHCCCCCCCCEEEEeecCcccchh
Q 038976 84 SNLLYVDQPTGTGFSYTSDKRDI------RHNENGVSNDLYDFLQAFFEEHPKLAENDFYITGESYAGHYIP 149 (220)
Q Consensus 84 anvlfiDqP~G~GfSy~~~~~~~------~~~~~~~a~d~~~fl~~f~~~~p~~~~~~~yi~GeSYgG~yvp 149 (220)
+.|=+|| +|-||......... ..+.++.++++...|+++..++ .. . ..-|+-|| |.|+-
T Consensus 282 ~~l~~LD--IGGGlgV~Y~g~~~~~~~s~nydl~eya~~Iv~~l~~~~~~~-~v-~-~p~Ii~Ep--GRalV 346 (634)
T PRK05354 282 APIQYLD--VGGGLGVDYDGTRSQSDSSVNYSLQEYANDVVYTLKEICEEH-GV-P-HPTIISES--GRALT 346 (634)
T ss_pred CCCCEEE--eCCCcCcCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHhc-CC-C-CCEEEECC--Cchhh
Confidence 3567999 79998654322211 1256778889999998888653 11 1 12455566 55544
Done!