Query 038977
Match_columns 145
No_of_seqs 106 out of 1096
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 05:10:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038977.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038977hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 4.8E-38 1E-42 239.7 14.5 142 1-142 393-534 (537)
2 COG0318 CaiC Acyl-CoA syntheta 100.0 8.4E-33 1.8E-37 213.1 15.9 140 1-140 386-527 (534)
3 KOG1177 Long chain fatty acid 100.0 7.2E-33 1.6E-37 203.8 14.0 143 1-143 446-590 (596)
4 COG0365 Acs Acyl-coenzyme A sy 100.0 3.7E-31 8E-36 201.4 14.8 139 1-140 382-522 (528)
5 PTZ00237 acetyl-CoA synthetase 100.0 8.1E-31 1.8E-35 206.0 16.4 140 1-140 476-623 (647)
6 PLN02654 acetate-CoA ligase 100.0 1.4E-30 3.1E-35 205.2 16.6 140 1-140 496-640 (666)
7 PLN02574 4-coumarate--CoA liga 100.0 2.4E-30 5.3E-35 200.2 16.1 142 1-142 415-556 (560)
8 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.9E-30 4.1E-35 204.1 15.5 140 1-140 480-626 (652)
9 PRK05677 long-chain-fatty-acid 100.0 3.4E-30 7.4E-35 199.4 16.4 144 1-144 418-561 (562)
10 PLN02860 o-succinylbenzoate-Co 100.0 2.8E-30 6E-35 200.0 15.6 142 1-142 399-556 (563)
11 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 6.6E-30 1.4E-34 200.0 16.4 141 1-141 458-603 (625)
12 PRK07824 O-succinylbenzoic aci 100.0 1.4E-29 3E-34 186.5 16.4 137 1-140 221-357 (358)
13 PLN03102 acyl-activating enzym 100.0 8.9E-30 1.9E-34 197.9 16.1 139 1-140 406-554 (579)
14 PRK00174 acetyl-CoA synthetase 100.0 1.2E-29 2.6E-34 199.0 16.9 141 1-141 466-611 (637)
15 PRK05852 acyl-CoA synthetase; 100.0 6.4E-30 1.4E-34 196.8 14.9 140 1-141 394-533 (534)
16 PRK09088 acyl-CoA synthetase; 100.0 2.2E-29 4.8E-34 191.7 16.5 141 1-141 346-486 (488)
17 PRK03584 acetoacetyl-CoA synth 100.0 1.5E-29 3.4E-34 198.9 16.0 141 1-141 479-626 (655)
18 TIGR02316 propion_prpE propion 100.0 1.9E-29 4.1E-34 197.7 15.6 140 1-140 454-604 (628)
19 PRK07445 O-succinylbenzoic aci 100.0 4.7E-29 1E-33 189.0 17.0 130 14-144 322-451 (452)
20 PLN02246 4-coumarate--CoA liga 100.0 3E-29 6.4E-34 193.2 16.1 140 1-140 397-536 (537)
21 PRK07867 acyl-CoA synthetase; 100.0 4.5E-29 9.7E-34 192.2 16.5 140 1-141 367-508 (529)
22 PRK06839 acyl-CoA synthetase; 100.0 4.9E-29 1.1E-33 189.8 16.1 139 1-140 357-495 (496)
23 KOG1175 Acyl-CoA synthetase [L 100.0 2.5E-29 5.3E-34 192.9 14.4 141 1-141 458-603 (626)
24 PRK07470 acyl-CoA synthetase; 100.0 7.5E-29 1.6E-33 190.5 16.4 143 1-144 380-522 (528)
25 PRK04319 acetyl-CoA synthetase 100.0 6.2E-29 1.3E-33 192.7 15.8 138 1-139 418-558 (570)
26 PRK13388 acyl-CoA synthetase; 100.0 6.1E-29 1.3E-33 191.8 15.6 139 1-140 366-506 (540)
27 PRK07529 AMP-binding domain pr 100.0 8.2E-29 1.8E-33 194.3 16.4 139 1-140 431-570 (632)
28 PRK06155 crotonobetaine/carnit 100.0 1.1E-28 2.4E-33 190.5 16.1 138 1-139 386-523 (542)
29 PRK08008 caiC putative crotono 100.0 7.1E-29 1.5E-33 190.1 14.6 135 1-135 383-517 (517)
30 PLN02330 4-coumarate--CoA liga 100.0 6.6E-29 1.4E-33 191.7 14.5 145 1-145 402-546 (546)
31 PRK05605 long-chain-fatty-acid 100.0 1.9E-28 4E-33 190.0 16.1 142 1-143 431-572 (573)
32 PRK06145 acyl-CoA synthetase; 100.0 1.7E-28 3.8E-33 187.1 15.5 138 1-139 359-496 (497)
33 PRK09274 peptide synthase; Pro 100.0 2.1E-28 4.5E-33 189.0 15.3 142 1-143 401-551 (552)
34 PRK07514 malonyl-CoA synthase; 100.0 3.4E-28 7.3E-33 185.7 16.3 141 1-141 362-502 (504)
35 PRK07788 acyl-CoA synthetase; 100.0 1.5E-28 3.3E-33 189.7 14.4 132 1-136 416-547 (549)
36 PRK06164 acyl-CoA synthetase; 100.0 4E-28 8.7E-33 186.9 16.5 140 1-141 391-533 (540)
37 PRK08315 AMP-binding domain pr 100.0 4.6E-28 1E-32 187.1 16.9 144 1-144 412-555 (559)
38 PRK08316 acyl-CoA synthetase; 100.0 3.3E-28 7.1E-33 186.2 15.8 141 1-142 381-521 (523)
39 PRK10524 prpE propionyl-CoA sy 100.0 5.1E-28 1.1E-32 189.5 17.1 140 1-140 455-605 (629)
40 COG1021 EntE Peptide arylation 100.0 4.9E-29 1.1E-33 180.5 10.4 141 1-142 399-540 (542)
41 PRK06060 acyl-CoA synthetase; 100.0 2.2E-28 4.8E-33 193.8 15.1 135 1-138 353-490 (705)
42 PRK08314 long-chain-fatty-acid 100.0 4.9E-28 1.1E-32 186.5 16.5 142 1-142 398-544 (546)
43 PRK12583 acyl-CoA synthetase; 100.0 6.6E-28 1.4E-32 186.1 17.2 142 1-142 413-554 (558)
44 PRK05620 long-chain-fatty-acid 100.0 2.7E-28 5.9E-33 189.3 15.0 141 1-141 399-558 (576)
45 PRK10946 entE enterobactin syn 100.0 3.4E-28 7.3E-33 187.4 15.4 139 1-141 394-533 (536)
46 PLN03051 acyl-activating enzym 100.0 3.5E-28 7.6E-33 186.1 15.4 141 1-142 335-493 (499)
47 PRK06178 acyl-CoA synthetase; 100.0 4.3E-28 9.4E-33 187.8 16.0 139 1-141 428-566 (567)
48 PRK07787 acyl-CoA synthetase; 100.0 2.6E-28 5.6E-33 185.4 14.3 135 1-137 335-470 (471)
49 PRK07798 acyl-CoA synthetase; 100.0 4.5E-28 9.7E-33 185.7 15.6 140 1-140 390-532 (533)
50 PRK06710 long-chain-fatty-acid 100.0 5E-28 1.1E-32 187.3 15.9 141 1-142 417-557 (563)
51 PRK07638 acyl-CoA synthetase; 100.0 5.2E-28 1.1E-32 184.2 15.6 137 1-142 347-483 (487)
52 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 3.3E-28 7.2E-33 187.0 14.6 134 1-135 393-527 (527)
53 PRK08279 long-chain-acyl-CoA s 100.0 2.9E-28 6.3E-33 189.9 14.0 139 3-141 420-565 (600)
54 PRK13295 cyclohexanecarboxylat 100.0 8.9E-28 1.9E-32 185.4 16.5 139 1-141 406-545 (547)
55 PRK05857 acyl-CoA synthetase; 100.0 5.3E-28 1.1E-32 186.6 14.7 139 1-140 388-531 (540)
56 PRK07769 long-chain-fatty-acid 100.0 3.5E-28 7.6E-33 190.5 13.8 140 1-141 432-615 (631)
57 PRK13390 acyl-CoA synthetase; 100.0 5.7E-28 1.2E-32 184.6 14.4 135 1-135 362-501 (501)
58 PRK09029 O-succinylbenzoic aci 100.0 7.9E-28 1.7E-32 182.1 14.7 138 1-142 318-455 (458)
59 PRK07656 long-chain-fatty-acid 100.0 9.8E-28 2.1E-32 183.2 15.2 136 1-136 377-512 (513)
60 TIGR03443 alpha_am_amid L-amin 100.0 2.6E-28 5.6E-33 204.4 13.0 136 1-136 635-824 (1389)
61 PLN02736 long-chain acyl-CoA s 100.0 2.4E-28 5.2E-33 192.1 11.5 139 1-142 472-643 (651)
62 PRK12492 long-chain-fatty-acid 100.0 1.8E-27 3.9E-32 184.3 16.1 136 1-137 426-561 (562)
63 PRK08276 long-chain-fatty-acid 100.0 2E-27 4.2E-32 181.6 15.9 141 1-141 354-497 (502)
64 PRK06188 acyl-CoA synthetase; 100.0 2.2E-27 4.8E-32 182.2 16.1 140 1-141 379-518 (524)
65 PRK12406 long-chain-fatty-acid 100.0 3.5E-27 7.7E-32 180.5 16.4 139 1-140 365-503 (509)
66 PRK07008 long-chain-fatty-acid 100.0 2.4E-27 5.3E-32 182.8 15.2 137 1-141 398-534 (539)
67 PRK08751 putative long-chain f 100.0 2.1E-27 4.6E-32 183.7 14.8 136 1-137 422-557 (560)
68 PRK07786 long-chain-fatty-acid 100.0 3.9E-27 8.5E-32 181.7 16.1 141 1-142 385-526 (542)
69 TIGR01734 D-ala-DACP-lig D-ala 100.0 3E-27 6.5E-32 180.4 15.0 138 1-139 356-501 (502)
70 PRK06087 short chain acyl-CoA 100.0 3E-27 6.5E-32 182.4 15.0 142 1-142 395-538 (547)
71 PRK08043 bifunctional acyl-[ac 100.0 3.6E-27 7.8E-32 187.3 15.7 124 14-140 589-713 (718)
72 PRK13391 acyl-CoA synthetase; 100.0 6.1E-27 1.3E-31 179.4 16.2 140 1-140 366-509 (511)
73 PRK03640 O-succinylbenzoic aci 100.0 5E-27 1.1E-31 178.4 15.4 137 1-140 346-482 (483)
74 PRK08162 acyl-CoA synthetase; 100.0 6.1E-27 1.3E-31 180.5 15.7 138 1-140 402-539 (545)
75 PRK06334 long chain fatty acid 99.9 4.2E-27 9.1E-32 181.7 14.5 134 1-140 394-535 (539)
76 PRK09188 serine/threonine prot 99.9 8.6E-27 1.9E-31 171.4 15.3 118 14-140 207-328 (365)
77 PRK07059 Long-chain-fatty-acid 99.9 6.6E-27 1.4E-31 180.9 15.5 136 1-137 420-555 (557)
78 PRK05851 long-chain-fatty-acid 99.9 2.9E-27 6.3E-32 181.9 13.3 133 1-140 386-522 (525)
79 PRK12476 putative fatty-acid-- 99.9 3.9E-27 8.4E-32 184.2 13.8 139 1-141 443-607 (612)
80 PLN02479 acetate-CoA ligase 99.9 5.3E-27 1.2E-31 181.9 14.3 139 1-141 416-559 (567)
81 PRK06187 long-chain-fatty-acid 99.9 1.4E-26 3E-31 177.0 16.3 140 1-141 381-520 (521)
82 TIGR03208 cyc_hxne_CoA_lg cycl 99.9 6.8E-27 1.5E-31 180.2 14.7 133 1-135 404-537 (538)
83 PRK07868 acyl-CoA synthetase; 99.9 6.1E-27 1.3E-31 191.1 15.0 122 14-137 834-955 (994)
84 PRK06018 putative acyl-CoA syn 99.9 1.6E-26 3.5E-31 178.2 16.1 137 1-140 398-534 (542)
85 PRK13382 acyl-CoA synthetase; 99.9 7.9E-27 1.7E-31 179.9 14.2 130 5-136 407-536 (537)
86 TIGR03098 ligase_PEP_1 acyl-Co 99.9 1.1E-26 2.4E-31 177.6 14.9 136 1-136 368-514 (515)
87 PLN03052 acetate--CoA ligase; 99.9 2.5E-26 5.4E-31 182.6 15.8 128 15-142 588-723 (728)
88 PRK04813 D-alanine--poly(phosp 99.9 3.9E-26 8.5E-31 174.1 16.1 138 1-139 358-502 (503)
89 PRK12316 peptide synthase; Pro 99.9 6.5E-27 1.4E-31 210.8 13.6 136 1-137 2359-2501(5163)
90 TIGR03205 pimA dicarboxylate-- 99.9 2.1E-26 4.5E-31 177.6 14.4 134 1-135 407-541 (541)
91 PRK08633 2-acyl-glycerophospho 99.9 2E-26 4.3E-31 190.0 14.5 137 1-140 1001-1143(1146)
92 PRK06814 acylglycerophosphoeth 99.9 4.6E-26 9.9E-31 188.1 15.9 139 1-142 995-1134(1140)
93 PRK12316 peptide synthase; Pro 99.9 1.7E-26 3.6E-31 208.2 13.8 134 1-138 865-1004(5163)
94 PRK08974 long-chain-fatty-acid 99.9 8.2E-26 1.8E-30 174.9 15.4 139 1-141 418-556 (560)
95 PRK12467 peptide synthase; Pro 99.9 1.1E-26 2.3E-31 206.9 11.7 137 1-138 3449-3592(3956)
96 PRK10252 entF enterobactin syn 99.9 5.2E-26 1.1E-30 189.5 14.7 136 1-136 816-963 (1296)
97 TIGR01923 menE O-succinylbenzo 99.9 6.5E-26 1.4E-30 170.3 13.3 131 1-134 306-436 (436)
98 PRK09192 acyl-CoA synthetase; 99.9 2.2E-25 4.8E-30 173.3 14.1 139 1-142 425-568 (579)
99 TIGR02262 benz_CoA_lig benzoat 99.9 2.1E-25 4.5E-30 170.7 13.7 135 1-136 370-507 (508)
100 PRK12467 peptide synthase; Pro 99.9 6.2E-26 1.3E-30 202.1 11.6 137 1-138 1932-2083(3956)
101 PLN02861 long-chain-fatty-acid 99.9 1.9E-25 4.1E-30 176.1 12.7 138 1-142 479-648 (660)
102 PRK13383 acyl-CoA synthetase; 99.9 5.6E-25 1.2E-29 168.8 14.8 122 14-135 394-515 (516)
103 PLN02614 long-chain acyl-CoA s 99.9 1.8E-25 3.9E-30 176.3 12.1 138 1-142 482-651 (666)
104 PRK05850 acyl-CoA synthetase; 99.9 5.5E-25 1.2E-29 170.9 14.2 139 1-142 411-570 (578)
105 PRK05691 peptide synthase; Val 99.9 3.1E-25 6.8E-30 198.7 14.1 136 1-137 1483-1625(4334)
106 PRK08308 acyl-CoA synthetase; 99.9 1.2E-24 2.5E-29 163.1 15.0 119 14-134 289-407 (414)
107 PRK05691 peptide synthase; Val 99.9 2.7E-25 5.8E-30 199.1 13.2 136 1-137 4080-4225(4334)
108 PRK08180 feruloyl-CoA synthase 99.9 1.1E-24 2.3E-29 170.6 9.6 138 1-142 425-598 (614)
109 PLN02387 long-chain-fatty-acid 99.9 3.3E-24 7.1E-29 169.9 12.2 139 1-142 516-691 (696)
110 PLN02430 long-chain-fatty-acid 99.9 6.9E-24 1.5E-28 167.3 11.5 138 1-142 479-648 (660)
111 PTZ00216 acyl-CoA synthetase; 99.9 1.9E-23 4.2E-28 165.7 12.4 139 1-142 521-693 (700)
112 PTZ00342 acyl-CoA synthetase; 99.9 4E-23 8.6E-28 164.4 12.2 139 1-142 555-736 (746)
113 PRK12582 acyl-CoA synthetase; 99.9 3.5E-23 7.6E-28 162.3 9.4 142 1-142 437-609 (624)
114 PRK07768 long-chain-fatty-acid 99.9 2.1E-22 4.6E-27 155.4 13.2 138 1-139 400-544 (545)
115 TIGR02372 4_coum_CoA_lig 4-cou 99.9 3E-21 6.5E-26 143.8 13.6 110 16-130 275-386 (386)
116 KOG1256 Long-chain acyl-CoA sy 99.9 3.2E-21 6.9E-26 148.8 11.1 139 1-142 512-682 (691)
117 COG1022 FAA1 Long-chain acyl-C 99.9 3.1E-21 6.7E-26 149.3 10.0 138 1-142 434-603 (613)
118 KOG1180 Acyl-CoA synthetase [L 99.8 5.6E-21 1.2E-25 143.4 8.2 139 1-142 497-671 (678)
119 KOG1179 Very long-chain acyl-C 99.7 8.2E-18 1.8E-22 126.8 9.0 137 1-137 467-610 (649)
120 KOG1178 Non-ribosomal peptide 99.7 3.1E-17 6.6E-22 132.2 10.3 122 15-136 453-575 (1032)
121 TIGR02155 PA_CoA_ligase phenyl 99.7 3.1E-16 6.7E-21 118.2 10.9 118 9-131 283-417 (422)
122 TIGR01733 AA-adenyl-dom amino 99.6 5.4E-15 1.2E-19 110.2 6.4 69 1-69 332-408 (408)
123 PF13193 AMP-binding_C: AMP-bi 99.5 1.5E-13 3.3E-18 79.4 6.7 70 53-128 1-73 (73)
124 PTZ00297 pantothenate kinase; 99.4 1.3E-12 2.8E-17 109.9 10.6 127 1-142 832-997 (1452)
125 COG1541 PaaK Coenzyme F390 syn 99.1 1.6E-09 3.5E-14 81.2 10.9 113 17-131 303-430 (438)
126 TIGR03335 F390_ftsA coenzyme F 99.0 4.6E-09 1E-13 80.0 11.8 115 17-131 299-440 (445)
127 COG1020 EntF Non-ribosomal pep 98.9 1.5E-09 3.2E-14 85.8 5.5 62 1-62 581-642 (642)
128 PF14535 AMP-binding_C_2: AMP- 98.6 2.3E-07 4.9E-12 56.3 6.8 85 46-131 1-91 (96)
129 KOG3628 Predicted AMP-binding 98.6 7.6E-07 1.6E-11 72.8 11.0 122 13-141 1216-1352(1363)
130 TIGR02304 aden_form_hyp probab 97.9 0.00026 5.7E-09 54.0 10.5 56 17-72 296-366 (430)
131 PF03321 GH3: GH3 auxin-respon 96.8 0.01 2.2E-07 46.7 8.1 102 17-119 370-493 (528)
132 KOG3628 Predicted AMP-binding 96.4 0.0073 1.6E-07 50.5 5.5 120 16-142 571-706 (1363)
133 PLN02249 indole-3-acetic acid- 94.2 0.93 2E-05 36.5 10.3 44 17-60 409-456 (597)
134 PLN02247 indole-3-acetic acid- 88.6 0.99 2.1E-05 36.3 4.8 45 17-61 416-464 (606)
135 PLN02620 indole-3-acetic acid- 88.4 1.1 2.5E-05 36.0 5.0 45 17-61 422-470 (612)
136 PF09580 Spore_YhcN_YlaJ: Spor 66.3 30 0.00064 23.0 5.8 52 51-108 77-128 (177)
137 PF08002 DUF1697: Protein of u 60.2 23 0.0005 22.8 4.2 34 41-75 10-44 (137)
138 TIGR02898 spore_YhcN_YlaJ spor 59.4 50 0.0011 21.9 7.1 53 51-108 56-109 (158)
139 PF04443 LuxE: Acyl-protein sy 52.0 15 0.00032 27.8 2.6 34 15-49 317-358 (365)
140 PRK04306 50S ribosomal protein 50.8 20 0.00044 21.7 2.6 32 18-49 35-73 (98)
141 PF01436 NHL: NHL repeat; Int 50.5 24 0.00052 15.7 3.4 18 26-43 9-26 (28)
142 PF06092 DUF943: Enterobacteri 44.8 13 0.00029 24.6 1.2 17 114-130 42-58 (157)
143 PF06739 SBBP: Beta-propeller 39.9 32 0.00068 16.7 1.9 16 24-39 18-33 (38)
144 PTZ00189 60S ribosomal protein 37.3 41 0.00089 22.4 2.6 33 17-49 33-72 (160)
145 PF08255 Leader_Trp: Trp-opero 36.7 17 0.00037 13.7 0.5 7 14-20 7-13 (14)
146 PHA02553 6 baseplate wedge sub 34.9 2.1E+02 0.0045 23.6 6.6 69 40-110 306-378 (611)
147 COG0075 Serine-pyruvate aminot 34.5 1.3E+02 0.0029 23.1 5.3 36 39-74 106-142 (383)
148 PF00403 HMA: Heavy-metal-asso 34.5 75 0.0016 16.7 5.8 46 51-104 13-58 (62)
149 PF11253 DUF3052: Protein of u 31.9 1.4E+02 0.0031 19.1 4.3 53 17-74 52-114 (127)
150 KOG2446 Glucose-6-phosphate is 31.7 91 0.002 24.6 4.0 66 21-87 88-156 (546)
151 PF10411 DsbC_N: Disulfide bon 30.8 57 0.0012 17.4 2.2 19 20-38 32-50 (57)
152 PF14326 DUF4384: Domain of un 30.5 84 0.0018 18.0 3.0 21 18-38 3-27 (83)
153 PF00036 EF-hand_1: EF hand; 30.3 61 0.0013 14.5 1.9 19 121-139 9-27 (29)
154 PLN00190 60S ribosomal protein 29.7 55 0.0012 21.8 2.3 32 18-49 34-72 (158)
155 KOG0257 Kynurenine aminotransf 29.5 2.8E+02 0.006 21.7 7.8 91 37-139 92-198 (420)
156 cd04717 BAH_polybromo BAH, or 28.7 89 0.0019 19.3 3.1 29 16-44 2-32 (121)
157 PF04784 DUF547: Protein of un 28.0 76 0.0016 19.7 2.7 23 40-62 50-72 (117)
158 PRK00556 minC septum formation 27.3 1.9E+02 0.0042 20.0 4.6 22 16-39 98-119 (194)
159 PF08478 POTRA_1: POTRA domain 26.7 1E+02 0.0022 16.5 2.9 28 48-75 33-60 (69)
160 KOG1556 26S proteasome regulat 25.7 27 0.00059 25.0 0.3 11 15-25 93-103 (309)
161 PF04865 Baseplate_J: Baseplat 25.4 2.4E+02 0.0052 19.6 5.7 66 37-106 107-173 (243)
162 KOG1767 40S ribosomal protein 25.3 42 0.0009 20.6 1.0 46 95-142 44-89 (110)
163 PF01426 BAH: BAH domain; Int 25.1 1.4E+02 0.0031 17.9 3.6 27 18-44 3-31 (119)
164 COG2139 RPL21A Ribosomal prote 25.1 73 0.0016 19.3 2.0 30 18-47 33-69 (98)
165 PF12433 PV_NSP1: Parvovirus n 24.5 46 0.00099 19.1 1.0 14 14-27 38-51 (80)
166 PRK12434 tRNA pseudouridine sy 24.4 2.7E+02 0.0058 19.8 6.5 63 52-118 30-96 (245)
167 PF11794 HpaB_N: 4-hydroxyphen 24.0 1E+02 0.0022 22.4 3.0 55 27-89 158-215 (264)
168 PF09926 DUF2158: Uncharacteri 23.8 55 0.0012 17.4 1.2 13 18-30 1-13 (53)
169 PF07193 DUF1408: Protein of u 23.3 97 0.0021 17.2 2.1 13 27-39 41-53 (75)
170 PF13405 EF-hand_6: EF-hand do 22.7 91 0.002 13.8 2.0 18 122-139 10-27 (31)
171 PF03250 Tropomodulin: Tropomo 22.2 1.7E+02 0.0037 19.2 3.5 31 110-140 45-75 (147)
172 cd04709 BAH_MTA BAH, or Bromo 22.2 91 0.002 20.8 2.3 28 17-44 3-31 (164)
173 PF13202 EF-hand_5: EF hand; P 21.6 90 0.002 13.4 1.9 17 121-137 8-24 (25)
174 PRK10597 DNA damage-inducible 21.3 1.9E+02 0.0041 16.9 3.4 44 96-139 23-68 (81)
175 KOG2863 RNA lariat debranching 21.2 1E+02 0.0022 23.7 2.6 28 31-61 103-130 (456)
176 PF04658 TAFII55_N: TAFII55 pr 21.0 47 0.001 22.1 0.8 18 9-26 66-83 (162)
177 PF02107 FlgH: Flagellar L-rin 20.8 1.5E+02 0.0034 20.0 3.2 27 19-47 96-122 (179)
178 cd08047 TAF7 TATA Binding Prot 20.7 46 0.001 22.1 0.7 18 9-26 64-81 (162)
179 PRK14588 tRNA pseudouridine sy 20.7 3.4E+02 0.0074 19.7 6.8 63 52-118 29-95 (272)
180 COG3700 AphA Acid phosphatase 20.6 1.5E+02 0.0033 20.4 3.1 64 47-113 47-116 (237)
181 PHA02885 putative interleukin 20.2 61 0.0013 19.9 1.1 39 15-58 48-86 (135)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=4.8e-38 Score=239.68 Aligned_cols=142 Identities=50% Similarity=0.778 Sum_probs=138.1
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||+||++|++.|+.+|||+|||+|++|+||+|++.+|.+|+||.+|.+|+|.+||+.|..||.|.+++|++.++..+|+.
T Consensus 393 Y~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~ 472 (537)
T KOG1176|consen 393 YLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGET 472 (537)
T ss_pred hcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCc
Confidence 99999999999987799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
++++|+.+++...+++++.+.++++++.++.|..+.|+++||+|++||++|+.|++.+.+..
T Consensus 473 p~A~VV~k~g~~lte~di~~~v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~~ 534 (537)
T KOG1176|consen 473 PAAFVVLKKGSTLTEKDIIEYVRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDIAKKLG 534 (537)
T ss_pred ceEEEEecCCCcCCHHHHHHHHHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999987643
No 2
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.4e-33 Score=213.14 Aligned_cols=140 Identities=44% Similarity=0.684 Sum_probs=133.4
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++|+.|.+.|..+|||+|||++++|++|.++|.||.+|+|+++|++|+|.+||+.+.+++.|.++.+++.++..+|+.
T Consensus 386 Y~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~aavvgvpd~~~Ge~ 465 (534)
T COG0318 386 YWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAEAAVVGVPDERWGER 465 (534)
T ss_pred hcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcceEEEEeCCCCccCce
Confidence 99999999999875699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEeCCC--CccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 81 PVAFVVRSNG--FELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 81 ~~~~v~~~~~--~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
+++++++..+ ...+.+++.+++++.++.+.+|+.+.+++++|+|++||++|+.|++++..
T Consensus 466 ~~a~v~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 466 VVAVVVLKPGGDAELTAEELRAFLRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred EEEEEEEcCCCCCCCCHHHHHHHHHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 9999999876 34478999999999999999999999999999999999999999999876
No 3
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=7.2e-33 Score=203.79 Aligned_cols=143 Identities=31% Similarity=0.412 Sum_probs=137.3
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.|++....+.||+|||++.+|++|.+.++||.+|+|+.+|++|+|.+||+.|.++|.|.++.+++.++...|+.
T Consensus 446 Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~~hp~V~~a~VVGV~D~R~GE~ 525 (596)
T KOG1177|consen 446 YWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLNKHPLVKEAHVVGVPDERLGEE 525 (596)
T ss_pred ecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHhhCCCeeeEEEEccCCCcccce
Confidence 89999999999998999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEeCCCCc--cCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccCC
Q 038977 81 PVAFVVRSNGFE--LTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSMP 143 (145)
Q Consensus 81 ~~~~v~~~~~~~--~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~~ 143 (145)
+|+++.++.+.+ .+.++|.++++.++..+.+|+.+++++++|+|.+|||++-++++++...+.
T Consensus 526 VCA~vRLqe~~e~~~t~E~lKa~Ck~klaHFKiPky~vf~~~FPlT~tGKIqKFeir~~~k~~l~ 590 (596)
T KOG1177|consen 526 VCACVRLQEGAEGKTTAETLKAMCKGKLAHFKIPKYFVFVDEFPLTTTGKIQKFEIREMSKGHLG 590 (596)
T ss_pred EEEEEEeeccccccccHHHHHHHHhcccccccCCcEEEEeccCcccccccchhHHHHHHHHhhcc
Confidence 999999988876 478999999999999999999999999999999999999999999986654
No 4
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.97 E-value=3.7e-31 Score=201.38 Aligned_cols=139 Identities=35% Similarity=0.515 Sum_probs=127.3
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||+||+.+.+.+- ++||.|||.+++|+||+++|+||.||+||++|++|.+.+||++|.+||.|.++.+++.++...|+.
T Consensus 382 ~w~d~er~~~~y~-~~~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~ 460 (528)
T COG0365 382 YWNDPERYKEAYF-GRWYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQI 460 (528)
T ss_pred hhCCHHHHHHHHh-hceeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEeccCCCCCcE
Confidence 8999999999885 339999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEeCCCCccC--HHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 81 PVAFVVRSNGFELT--EEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 81 ~~~~v~~~~~~~~~--~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
+.+||++.++...+ .+++.+++++.+.++..|+.+.++++||+|.||||.|+.|++.+.+
T Consensus 461 v~afVvL~~g~~~~~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~~~ 522 (528)
T COG0365 461 VLAFVVLAAGVEPNELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKILHK 522 (528)
T ss_pred EEEEEEecCCCChHHHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHHhh
Confidence 99999999876544 3566677767777899999999999999999999999999998773
No 5
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.97 E-value=8.1e-31 Score=206.01 Aligned_cols=140 Identities=24% Similarity=0.392 Sum_probs=126.3
Q ss_pred CCCChhhhhcccCC-CCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCc
Q 038977 1 YLNDPEATAATIDV-EGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGE 79 (145)
Q Consensus 1 Y~~~~~~t~~~~~~-~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~ 79 (145)
||++++.+.+.|.. +|||+|||++++|++|+++++||+||+||++|++|+|.+||+.|.++|.|.++++++.++...++
T Consensus 476 y~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l~~~p~V~eaavvg~~~~~~g~ 555 (647)
T PTZ00237 476 FYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIETSILKHPLVLECCSIGIYDPDCYN 555 (647)
T ss_pred eeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHHHHHhCCCceeeEEEeeEcCCCCC
Confidence 89999999988853 79999999999999999999999999999999999999999999999999999999999998888
Q ss_pred eeEEEEEeCCCC---ccCH----HHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 80 VPVAFVVRSNGF---ELTE----EAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 80 ~~~~~v~~~~~~---~~~~----~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
.++++|++..+. ..+. +++.+.+++.++.+.+|+.+++++++|+|++||++|+.|++++..
T Consensus 556 ~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~ 623 (647)
T PTZ00237 556 VPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLND 623 (647)
T ss_pred EEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcC
Confidence 999998887432 2232 456777888999999999999999999999999999999998754
No 6
>PLN02654 acetate-CoA ligase
Probab=99.97 E-value=1.4e-30 Score=205.22 Aligned_cols=140 Identities=30% Similarity=0.450 Sum_probs=128.2
Q ss_pred CCCChhhhhccc--CCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCC
Q 038977 1 YLNDPEATAATI--DVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAG 78 (145)
Q Consensus 1 Y~~~~~~t~~~~--~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~ 78 (145)
||++++.+...+ ..+|||+|||++++|++|.++++||+||+||++|.+|+|.+||+++.++|.|.++++++.++...+
T Consensus 496 y~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaaVvg~~d~~~g 575 (666)
T PLN02654 496 LYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGIEHEVKG 575 (666)
T ss_pred hcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEeeEcCCCC
Confidence 899999887765 237999999999999999999999999999999999999999999999999999999999999889
Q ss_pred ceeEEEEEeCCCCccCH---HHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 79 EVPVAFVVRSNGFELTE---EAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 79 ~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
+.++++|++.++...+. +++.+.++++|+.+++|+.++++++||+|++||++|+.|++.+..
T Consensus 576 e~~~a~Vvl~~~~~~~~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~ 640 (666)
T PLN02654 576 QGIYAFVTLVEGVPYSEELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASR 640 (666)
T ss_pred eEEEEEEEECCCCCCCHHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcC
Confidence 99999999887654433 478889999999999999999999999999999999999998765
No 7
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.97 E-value=2.4e-30 Score=200.23 Aligned_cols=142 Identities=57% Similarity=0.948 Sum_probs=132.7
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.|.+.|..+|||+|||++++|++|.+++.||.+|+|+++|.+|+|.+||..|.+++.|.++++++.++...++.
T Consensus 415 Y~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~~~v~~~~~~~~g~~ 494 (560)
T PLN02574 415 YLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDAAVTAVPDKECGEI 494 (560)
T ss_pred hcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcceEEEEccccCCCCcc
Confidence 89999999999988999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
+++++....+...+.+++.+.++++++.++.|..+.++++||+|++||++|+.|++.+.+..
T Consensus 495 ~~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~~~ 556 (560)
T PLN02574 495 PVAFVVRRQGSTLSQEAVINYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTNSV 556 (560)
T ss_pred eEEEEEeCCCCCCCHHHHHHHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhhcc
Confidence 88888877666667789999999999999999999999999999999999999999987654
No 8
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.97 E-value=1.9e-30 Score=204.10 Aligned_cols=140 Identities=21% Similarity=0.262 Sum_probs=125.9
Q ss_pred CCCChhhhh---ccc-CCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCC
Q 038977 1 YLNDPEATA---ATI-DVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEV 76 (145)
Q Consensus 1 Y~~~~~~t~---~~~-~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~ 76 (145)
||++++.|. ..| ..+|||+|||++++|+||.++++||+||+|+++|.+|+|.+||++|.++|.|.++++++.++..
T Consensus 480 y~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaavvg~~~~~ 559 (652)
T TIGR01217 480 FWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDEVRESLCIGQEQPD 559 (652)
T ss_pred eeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCCcceEEEEeeecCC
Confidence 899998664 223 2378999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCceeEEEEEeCCCCccCH---HHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 77 AGEVPVAFVVRSNGFELTE---EAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 77 ~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
.++.++++|++.++...+. +++.+++++.++.+++|..+.++++||+|++||++|+.|++.+..
T Consensus 560 ~ge~~~afVv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~r~~Lr~~~~~ 626 (652)
T TIGR01217 560 GGYRVVLFVHLAPGATLDDALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTLTGKRVEVAVKRVLQG 626 (652)
T ss_pred CCEEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccChHHHHHHHHcC
Confidence 8999999999887654443 588999999999999999999999999999999999999998743
No 9
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.97 E-value=3.4e-30 Score=199.44 Aligned_cols=144 Identities=35% Similarity=0.540 Sum_probs=134.3
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++|+.|++.|..+|||+|||++++|++|.+++.||.+|+|+++|.+|+|.+||+.+..++.|.++++++.++...++.
T Consensus 418 Y~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~~v~~~~v~g~~~~~~g~~ 497 (562)
T PRK05677 418 YWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQCAAIGVPDEKSGEA 497 (562)
T ss_pred hcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCccCCce
Confidence 89999999999987999999999999999999999999999999999999999999999999999999999998887888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccCCC
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSMPL 144 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~~~ 144 (145)
+++++++..+...+.+++.+.+++.++.+++|..++++++||+|++||++|++|++++....++
T Consensus 498 ~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~sGKi~r~~L~~~~~~~~~~ 561 (562)
T PRK05677 498 IKVFVVVKPGETLTKEQVMEHMRANLTGYKVPKAVEFRDELPTTNVGKILRRELRDEELKKAGL 561 (562)
T ss_pred EEEEEEeCCCCCCCHHHHHHHHHHhhhhccCCcEEEEeccCCCCCcccccHHHHHHHHHHhccC
Confidence 8888887766667788999999999999999999999999999999999999999988776654
No 10
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.97 E-value=2.8e-30 Score=200.03 Aligned_cols=142 Identities=29% Similarity=0.467 Sum_probs=128.7
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++|+.|++.|..+|||+|||++++|++|.+++.||.+|+|+++|.+|+|.+||+.+.++|.|.++++++.++...++.
T Consensus 399 Y~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~~~~~~ 478 (563)
T PLN02860 399 YWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGVASVVVVGVPDSRLTEM 478 (563)
T ss_pred ccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCCcceeEEEEEecCcCCce
Confidence 89999999999988999999999999999999999999999999999999999999999999999999999998888889
Q ss_pred eEEEEEeCCCC--------------ccCHHHHHHHHHh-ccccccCceEEEEe-ccCCCCCCCcccHHHHHHHHHccC
Q 038977 81 PVAFVVRSNGF--------------ELTEEAIKEYIAK-QVVFYKRLHKVHFV-HAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 81 ~~~~v~~~~~~--------------~~~~~~l~~~l~~-~l~~~~~p~~~~~v-~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
+++++++.++. ..+.+++.+++.+ .++.+++|..++++ +.+|+|++||++|++|++++.+..
T Consensus 479 ~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~lP~t~~GKi~r~~L~~~~~~~~ 556 (563)
T PLN02860 479 VVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKPFPLTTTGKIRRDEVRREVLSHL 556 (563)
T ss_pred EEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccceEEEEEecCCCCCcccchhHHHHHHHHHHHH
Confidence 99998877542 2345678888887 59999999988765 679999999999999999987665
No 11
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.97 E-value=6.6e-30 Score=200.01 Aligned_cols=141 Identities=33% Similarity=0.505 Sum_probs=128.7
Q ss_pred CCCChhhhhcccC--CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCC
Q 038977 1 YLNDPEATAATID--VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAG 78 (145)
Q Consensus 1 Y~~~~~~t~~~~~--~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~ 78 (145)
||++++.+.+.+. .+|||+|||++++|++|.++++||+||+|+++|.+|+|.+||++|.++|.|.++++++.++...+
T Consensus 458 y~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg~~~~~~g 537 (625)
T TIGR02188 458 IYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALVSHPAVAEAAVVGIPDDIKG 537 (625)
T ss_pred ccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCC
Confidence 8999988877652 47899999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceeEEEEEeCCCCccC---HHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 79 EVPVAFVVRSNGFELT---EEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 79 ~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+.+++++++..+...+ .+++.+.+++.++.+++|+.++++++||+|++||++|+.|++.+...
T Consensus 538 ~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 603 (625)
T TIGR02188 538 QAIYAFVTLKDGYEPDDELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGE 603 (625)
T ss_pred eEEEEEEEeCCCCCCCHHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccchHHHHHHHHcCC
Confidence 9999999888765443 36889999999999999999999999999999999999999987654
No 12
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.97 E-value=1.4e-29 Score=186.48 Aligned_cols=137 Identities=28% Similarity=0.444 Sum_probs=125.2
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||+++..+ .|..+|||+|||++++ ++|.+++.||.||+|+++|.+|+|.+||..+.++|.|.++++++.++...++.
T Consensus 221 Y~~~~~~~--~~~~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~ 297 (358)
T PRK07824 221 YRNPVDPD--PFAEPGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQR 297 (358)
T ss_pred cCCCcccc--cccCCCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceE
Confidence 78888744 4555789999999999 89999999999999999999999999999999999999999999998888888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
+++++....+.....+++.+.+++.++.+++|..+.++++||+|++||++|++|++++.+
T Consensus 298 ~~a~v~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 298 VVAAVVGDGGPAPTLEALRAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred EEEEEEeCCCCCcCHHHHHHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 888887776666778899999999999999999999999999999999999999999865
No 13
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.97 E-value=8.9e-30 Score=197.91 Aligned_cols=139 Identities=34% Similarity=0.538 Sum_probs=127.9
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++|+.|.+.|. +|||+|||++++|++|++++.||.+|+|+++|.+|+|.+||+.+.++|.|.++++++.++...++.
T Consensus 406 Y~~~~~~t~~~f~-~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~~~~ 484 (579)
T PLN03102 406 YLKNPKATSEAFK-HGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETAVVAMPHPTWGET 484 (579)
T ss_pred hcCChhhhHhhhc-cCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCcceeEEEeccCccccce
Confidence 8999999999996 899999999999999999999999999999999999999999999999999999999999888888
Q ss_pred eEEEEEeCCCCcc----------CHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 81 PVAFVVRSNGFEL----------TEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 81 ~~~~v~~~~~~~~----------~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
+++++.+..+... ...++.+.++++|+.++.|..+++++++|+|++||++|++|++++.+
T Consensus 485 ~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L~~~~~~ 554 (579)
T PLN03102 485 PCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQELPKNGNGKILKPKLRDIAKG 554 (579)
T ss_pred eEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEcccCCCCCcccccHHHHHHHHHH
Confidence 8888887654332 34678999999999999999999999999999999999999998754
No 14
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.97 E-value=1.2e-29 Score=198.98 Aligned_cols=141 Identities=29% Similarity=0.477 Sum_probs=128.3
Q ss_pred CCCChhhhhccc--CCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCC
Q 038977 1 YLNDPEATAATI--DVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAG 78 (145)
Q Consensus 1 Y~~~~~~t~~~~--~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~ 78 (145)
||++++.+.+.+ ..+|||+|||++++|++|.++++||+||+||++|.+|+|.+||++|.+++.|.++++++.++...+
T Consensus 466 y~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~~V~~~~Vvg~~~~~~g 545 (637)
T PRK00174 466 IYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKVAEAAVVGRPDDIKG 545 (637)
T ss_pred ccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHHhCCCcceEEEEeeEcCCCC
Confidence 899999887765 347899999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceeEEEEEeCCCCccC---HHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 79 EVPVAFVVRSNGFELT---EEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 79 ~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+.+++++++..+...+ .+++.+.+++.++.+++|..+++++.||+|++||++|+.|++.+...
T Consensus 546 ~~~~a~vv~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~ 611 (637)
T PRK00174 546 QGIYAFVTLKGGEEPSDELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGE 611 (637)
T ss_pred eEEEEEEEECCCCCCCHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC
Confidence 8999999887765433 46899999999999999999999999999999999999999887544
No 15
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.97 E-value=6.4e-30 Score=196.75 Aligned_cols=140 Identities=27% Similarity=0.493 Sum_probs=131.0
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.|++.|. +|||+|||++++|++|++++.||.+|+|+++|.+|+|.+||+++.+++.|.++++++.++...++.
T Consensus 394 Y~~~~~~t~~~~~-~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~ 472 (534)
T PRK05852 394 YLGDPTITAANFT-DGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPDQLYGEA 472 (534)
T ss_pred hcCCcccchhhhc-CCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcCce
Confidence 8999999999985 899999999999999999999999999999999999999999999999999999999998877888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
++++++.......+.+++.+.++++++.+++|..++++++||+|++||++|++|++++.+.
T Consensus 473 ~~~~vv~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~~ 533 (534)
T PRK05852 473 VAAVIVPRESAPPTAEELVQFCRERLAAFEIPASFQEASGLPHTAKGSLDRRAVAEQFGHS 533 (534)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHhcccccCCeEEEEhhhcCCCCCccccHHHHHHHhccc
Confidence 8888887666666788999999999999999999999999999999999999999998754
No 16
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.97 E-value=2.2e-29 Score=191.71 Aligned_cols=141 Identities=35% Similarity=0.523 Sum_probs=130.9
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.|+..|..+|||+|||++++|++|.+++.||.+|+|+++|.+|+|.+||+.|.+++.|.++++++.++...++.
T Consensus 346 Y~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~ 425 (488)
T PRK09088 346 YWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEV 425 (488)
T ss_pred hcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCce
Confidence 89999999999988999999999999999999999999999999999999999999999999999999999988777777
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
.++++.+......+..++.+.+++.++.++.|..+.+++.||+|++||++|++|++++.+.
T Consensus 426 ~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 426 GYLAIVPADGAPLDLERIRSHLSTRLAKYKVPKHLRLVDALPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred eEEEEEECCCCCCCHHHHHHHHHhhCcCCCCCCEEEEcccCCCCCCCceeHHHHHHHHHhc
Confidence 7888887766556778999999999999999999999999999999999999999998764
No 17
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.97 E-value=1.5e-29 Score=198.91 Aligned_cols=141 Identities=23% Similarity=0.289 Sum_probs=124.9
Q ss_pred CCCChhhhh---ccc-CCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCC
Q 038977 1 YLNDPEATA---ATI-DVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEV 76 (145)
Q Consensus 1 Y~~~~~~t~---~~~-~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~ 76 (145)
||++++.+. ..| ..+|||+|||++++|++|.++++||.||+||++|.+|+|.+||++|.++|.|.++++++.++..
T Consensus 479 y~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V~ea~vvg~~~~~ 558 (655)
T PRK03584 479 FWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPEVLDSLVIGQEWPD 558 (655)
T ss_pred eeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCCcceEEEEeeEcCC
Confidence 889887653 112 2268999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCceeEEEEEeCCCCccCH---HHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 77 AGEVPVAFVVRSNGFELTE---EAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 77 ~~~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
.++.+++++++..+...+. +++.+.+++.++.+++|..+++++.||+|++||++|+.|++.+...
T Consensus 559 ~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sGKi~r~~lr~~~~~~ 626 (655)
T PRK03584 559 GDVRMPLFVVLAEGVTLDDALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSGKKVELPVKKLLHGR 626 (655)
T ss_pred CCEEEEEEEEECCCCCCcHHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCccchHHHHHHHHcCC
Confidence 8889999999877654443 5789999999999999999999999999999999999999987643
No 18
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.97 E-value=1.9e-29 Score=197.67 Aligned_cols=140 Identities=31% Similarity=0.433 Sum_probs=125.2
Q ss_pred CCCChhhhhccc---CCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCC
Q 038977 1 YLNDPEATAATI---DVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVA 77 (145)
Q Consensus 1 Y~~~~~~t~~~~---~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~ 77 (145)
||++++.+.+.+ ..++||+|||++++|++|.++++||.||+||++|.+|+|.+||++|.++|.|.++++++.++...
T Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~p~V~ea~Vvg~~d~~~ 533 (628)
T TIGR02316 454 VWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVSSHPSVAEVAVVGVHDELK 533 (628)
T ss_pred ccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeeecCCC
Confidence 788888776654 24789999999999999999999999999999999999999999999999999999999999988
Q ss_pred CceeEEEEEeCCCCc--------cCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 78 GEVPVAFVVRSNGFE--------LTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 78 ~~~~~~~v~~~~~~~--------~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
++.+++++++..+.. ...+++.++++++|+.+++|..+++++.||+|++||++|+.|++.++.
T Consensus 534 g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~~~ 604 (628)
T TIGR02316 534 GQVAVVFAILKESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKLLRRSIQALAEG 604 (628)
T ss_pred CeEEEEEEEEcCCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHHcC
Confidence 889999988775432 124678999999999999999999999999999999999999987653
No 19
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.97 E-value=4.7e-29 Score=188.99 Aligned_cols=130 Identities=30% Similarity=0.415 Sum_probs=120.6
Q ss_pred CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCcc
Q 038977 14 VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFEL 93 (145)
Q Consensus 14 ~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 93 (145)
.+|||+|||++++|++|++++.||.||+|+++|.+|+|.+||+.+.++|.|.++++++.++...++.++++++...+ ..
T Consensus 322 ~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~-~~ 400 (452)
T PRK07445 322 SQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDP-SI 400 (452)
T ss_pred CCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCC-CC
Confidence 47999999999999999999999999999999999999999999999999999999999988888888888877654 35
Q ss_pred CHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccCCC
Q 038977 94 TEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSMPL 144 (145)
Q Consensus 94 ~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~~~ 144 (145)
+.+++.++++++++.+++|..+++++++|+|++||++|+.|++++.+++.+
T Consensus 401 ~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~~ 451 (452)
T PRK07445 401 SLEELKTAIKDQLSPFKQPKHWIPVPQLPRNPQGKINRQQLQQIAVQRLGL 451 (452)
T ss_pred CHHHHHHHHHHhCCcccCCeEEEEecCCCCCCCcccCHHHHHHHHHHhhCC
Confidence 678999999999999999999999999999999999999999999988754
No 20
>PLN02246 4-coumarate--CoA ligase
Probab=99.97 E-value=3e-29 Score=193.20 Aligned_cols=140 Identities=79% Similarity=1.217 Sum_probs=131.3
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++|+.+.+.|..+|||+|||+++++++|.+++.||.|++++++|.+|+|.+||+.+.++++|.++++++.++...++.
T Consensus 397 Y~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~ 476 (537)
T PLN02246 397 YLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKDEVAGEV 476 (537)
T ss_pred ccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEcccCccCCce
Confidence 89999999999987999999999999999999999999999999999999999999999999999999999888888888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
+++++....+...+.+++.+.+++.++.++.|..+.+++++|+|++||++|++|++++.+
T Consensus 477 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 477 PVAFVVRSNGSEITEDEIKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred eEEEEEeCCCCCCCHHHHHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 888888877666677899999999999999999999999999999999999999998864
No 21
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.97 E-value=4.5e-29 Score=192.17 Aligned_cols=140 Identities=27% Similarity=0.451 Sum_probs=130.1
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++|+.+.+.|. +|||+|||+++++++|.+++.||.||+++++|.+|+|.+||+.+.++|.|.++++++.++...++.
T Consensus 367 y~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~g~~ 445 (529)
T PRK07867 367 YYNDPEADAERMR-GGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDATEVAVYAVPDPVVGDQ 445 (529)
T ss_pred ccCChHhhhhhhc-CCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEEEeccCCCCCee
Confidence 8999999999995 899999999999999999999999999999999999999999999999999999999999888889
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhc--cccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQ--VVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~--l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+++++....+...+..++.+.+..+ ++.++.|..+.+++++|+|++||++|++|+++....
T Consensus 446 ~~a~vv~~~~~~~~~~~l~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~~~ 508 (529)
T PRK07867 446 VMAALVLAPGAKFDPDAFAEFLAAQPDLGPKQWPSYVRVCAELPRTATFKVLKRQLSAEGVDC 508 (529)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHhhccCCcccCCeEEEEeeccCCCCCcceeHHHHHHhcCCC
Confidence 9988888777667788888888765 999999999999999999999999999999977544
No 22
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.96 E-value=4.9e-29 Score=189.84 Aligned_cols=139 Identities=35% Similarity=0.547 Sum_probs=130.9
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+...+. +|||+|||+++++++|.+++.||.+|+|+++|.+|+|.+||+.+..+++|.++++++.++...++.
T Consensus 357 y~~~~~~~~~~~~-~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~ 435 (496)
T PRK06839 357 YWNRPDATEETIQ-DGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEI 435 (496)
T ss_pred hcCChHHHHHHHc-CCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCce
Confidence 8999999998885 899999999999999999999999999999999999999999999999999999999999888888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
+++++.+.++...+.+++.+.++..++.+++|..+++++++|+|++||++|++|+++..+
T Consensus 436 ~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 436 PIAFIVKKSSSVLIEKDVIEHCRLFLAKYKIPKEIVFLKELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHhhCcCCCCCcEEEEeccCCCCccccccHHHHHHHhhc
Confidence 899998887777778899999999999999999999999999999999999999988764
No 23
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.96 E-value=2.5e-29 Score=192.86 Aligned_cols=141 Identities=33% Similarity=0.492 Sum_probs=127.1
Q ss_pred CCCChh-hhhccc-CCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCC
Q 038977 1 YLNDPE-ATAATI-DVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAG 78 (145)
Q Consensus 1 Y~~~~~-~t~~~~-~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~ 78 (145)
||+|++ -....| ...|+|.|||.+++|++|++++.||.||+|+++|+++++.+||+++..||.|.++.+++.+++..|
T Consensus 458 ~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp~VaEsAvVg~p~~~~g 537 (626)
T KOG1175|consen 458 LWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVEHPAVAESAVVGSPDPIKG 537 (626)
T ss_pred ccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhhCcchhheeeecCCCCCCC
Confidence 688888 333333 569999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEeCCCCccCH---HHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 79 EVPVAFVVRSNGFELTE---EAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 79 ~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+.+++|+++.++....+ .+|..++++.+.++..|+.|.+++.||+|.|||+.|+.|++.+...
T Consensus 538 e~v~aFvvl~~g~~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~ 603 (626)
T KOG1175|consen 538 EVVLAFVVLKSGSHDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGK 603 (626)
T ss_pred eEEEEEEEEcCCCCChHHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHHHHhccC
Confidence 99999999998854332 5778888889999999999999999999999999999999887654
No 24
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.96 E-value=7.5e-29 Score=190.47 Aligned_cols=143 Identities=34% Similarity=0.525 Sum_probs=131.7
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.++..|. +|||+|||+++++++|++++.||.||+++++|.+|+|.+||+.+.+++.|.++++++.++...++.
T Consensus 380 y~~~~~~~~~~~~-~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~ 458 (528)
T PRK07470 380 YYNNPEANAKAFR-DGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVWGEV 458 (528)
T ss_pred hcCCHHHHHhhhc-CCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEeccCcccCce
Confidence 8999999998885 899999999999999999999999999999999999999999999999999999999988877777
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccCCC
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSMPL 144 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~~~ 144 (145)
.++++...++...+.+++.+++.+.|+.+++|..++++++||+|++||++|+.|++++++...+
T Consensus 459 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~~~~ 522 (528)
T PRK07470 459 GVAVCVARDGAPVDEAELLAWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEERGLL 522 (528)
T ss_pred eEEEEEECCCCCCCHHHHHHHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhcccc
Confidence 7888877766556788999999999999999999999999999999999999999998876644
No 25
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.96 E-value=6.2e-29 Score=192.73 Aligned_cols=138 Identities=33% Similarity=0.520 Sum_probs=127.7
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.|...|. +|||+|||+++++++|.++++||.+|+|+++|++|+|.+||+.+.+++.|.++++++.++...++.
T Consensus 418 Y~~~~~~~~~~~~-~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~ 496 (570)
T PRK04319 418 IWNNPEKYESYFA-GDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIGKPDPVRGEI 496 (570)
T ss_pred hcCCHHHhhhhhc-CCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecceecccCcCCceE
Confidence 8999999999996 899999999999999999999999999999999999999999999999999999999998888888
Q ss_pred eEEEEEeCCCCccC---HHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHH
Q 038977 81 PVAFVVRSNGFELT---EEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLA 139 (145)
Q Consensus 81 ~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~ 139 (145)
+++++++.++...+ .+++...++++++.++.|..++++++||+|++||++|+.|+++..
T Consensus 497 ~~a~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~ 558 (570)
T PRK04319 497 IKAFVALRPGYEPSEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRVLKAWEL 558 (570)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHHHHHHHh
Confidence 88888877654433 258889999999999999999999999999999999999999864
No 26
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.96 E-value=6.1e-29 Score=191.79 Aligned_cols=139 Identities=29% Similarity=0.499 Sum_probs=127.3
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++|+.|++.|. +|||+|||++++|++|.++++||.+|+|+++|.+|+|.+||+.+.+++.|.++++++.++...++.
T Consensus 366 Y~~~~~~t~~~~~-~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~ 444 (540)
T PRK13388 366 YYNNPEATAERMR-HGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRVAVYAVPDERVGDQ 444 (540)
T ss_pred ccCChHHHHHHhh-cCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEEEEEEccCCCCCce
Confidence 8999999999995 899999999999999999999999999999999999999999999999999999999998877888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhc--cccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQ--VVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~--l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
+++++.+..+...+..++.+.+..+ ++.++.|..++++++||+|++||++|++|+++...
T Consensus 445 ~~~~v~~~~~~~~~~~~l~~~l~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~ 506 (540)
T PRK13388 445 VMAALVLRDGATFDPDAFAAFLAAQPDLGTKAWPRYVRIAADLPSTATNKVLKRELIAQGWA 506 (540)
T ss_pred eEEEEEECCCCcCCHHHHHHHHHhhccCCcccCCcEEEEeccCCCCCcceeeHHhHHHhccC
Confidence 8888887776666777888888764 99999999999999999999999999999987643
No 27
>PRK07529 AMP-binding domain protein; Validated
Probab=99.96 E-value=8.2e-29 Score=194.26 Aligned_cols=139 Identities=32% Similarity=0.499 Sum_probs=126.8
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||+++. +...|..+|||+|||++++|++|.+++.||.||+|+++|.+|+|.+||+.|.++|.|.++.+++.++...++.
T Consensus 431 Y~~~~~-~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~~~p~V~~a~vvg~~d~~~ge~ 509 (632)
T PRK07529 431 YLEAAH-NKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALLRHPAVALAAAVGRPDAHAGEL 509 (632)
T ss_pred ccCCcc-ccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCce
Confidence 777654 5556656899999999999999999999999999999999999999999999999999999999999888899
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccc-cccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVV-FYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~-~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
+++++++..+...+.+++.++++++++ .+++|..++++++||+|++||++|.+|++.+..
T Consensus 510 ~~a~v~l~~~~~~~~~~l~~~~~~~l~~~~~~P~~i~~v~~lP~t~~GKi~r~~Lr~~~~~ 570 (632)
T PRK07529 510 PVAYVQLKPGASATEAELLAFARDHIAERAAVPKHVRILDALPKTAVGKIFKPALRRDAIR 570 (632)
T ss_pred eEEEEEEcCCCCCCHHHHHHHHHHhcchhccCCcEEEEecCCCCCCCCcccHHHHHHHHHH
Confidence 999999888777788899999999986 579999999999999999999999999988755
No 28
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.96 E-value=1.1e-28 Score=190.49 Aligned_cols=138 Identities=31% Similarity=0.437 Sum_probs=128.9
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.|...|. ++||+|||+++++++|.+++.||.+|+|+++|.+|+|.+||+.+.++++|.++++++.++...++.
T Consensus 386 Y~~~~~~~~~~~~-~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~~~~~~~ 464 (542)
T PRK06155 386 YFGMPEKTVEAWR-NLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPVPSELGEDE 464 (542)
T ss_pred hcCCHHHHHHhhc-CCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeecccccCce
Confidence 8999999999985 899999999999999999999999999999999999999999999999999999999988877788
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHH
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLA 139 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~ 139 (145)
+.+++.+..+...+..++.+.++++++.+++|..+.+++++|+|++||++|++|++++.
T Consensus 465 ~~~~v~~~~~~~~~~~~~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~ 523 (542)
T PRK06155 465 VMAAVVLRDGTALEPVALVRHCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGV 523 (542)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhcc
Confidence 88888877776777889999999999999999999999999999999999999998764
No 29
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.96 E-value=7.1e-29 Score=190.08 Aligned_cols=135 Identities=37% Similarity=0.583 Sum_probs=127.3
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.|++.|..+|||+|||++++|++|.++++||.+|+++++|.+|+|.+||..+..++.|.++++++.++...++.
T Consensus 383 y~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~ 462 (517)
T PRK08008 383 YYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEA 462 (517)
T ss_pred HhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEccCCCCCCce
Confidence 89999999999988999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHH
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLI 135 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~ 135 (145)
+.+++.+..+...+..++.+++++.++.+.+|..+.+++++|+|++||++|+.|+
T Consensus 463 ~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 463 IKAFVVLNEGETLSEEEFFAFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 8888888877667778999999999999999999999999999999999998763
No 30
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.96 E-value=6.6e-29 Score=191.65 Aligned_cols=145 Identities=54% Similarity=0.859 Sum_probs=134.1
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+.+.++.+|||+|||+++++++|.++++||.+|+++++|.+|+|.+||..+.+++.|.++++++.++...++.
T Consensus 402 y~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~ 481 (546)
T PLN02330 402 YYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVPLPDEEAGEI 481 (546)
T ss_pred hccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEEEeccccccCce
Confidence 89999999999988999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccCCCC
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSMPLN 145 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~~~~ 145 (145)
+++++.+..+...+.+++.+.++.+++.++.|..+++++++|+|++||++|+.|++++.....+|
T Consensus 482 ~~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~~~~~~~~~ 546 (546)
T PLN02330 482 PAACVVINPKAKESEEDILNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEKMLSINKAN 546 (546)
T ss_pred eEEEEEECCCCCCCHHHHHHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHHHHHHhhhcCC
Confidence 88888887766667788999999999999999999999999999999999999999997655443
No 31
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=1.9e-28 Score=190.02 Aligned_cols=142 Identities=35% Similarity=0.541 Sum_probs=132.2
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+...|. +|||+|||+++++++|.+++.||.||+++++|.+|+|.+||+.+..++.|.++++++.++...++.
T Consensus 431 y~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~~~~i~~~~v~~~~~~~~~~~ 509 (573)
T PRK05605 431 YWNRPEETAKSFL-DGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLREHPGVEDAAVVGLPREDGSEE 509 (573)
T ss_pred hcCChhHhhhccc-CCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHHhCcccceEEEEeeecccCCeE
Confidence 8899999999985 679999999999999999999999999999999999999999999999999999999988877788
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccCC
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSMP 143 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~~ 143 (145)
+++++++..+...+..++.+.+++.++.+++|..+++++++|+|.+||++|++|++++.+.++
T Consensus 510 ~~~~vv~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~L~~~~~~~~~ 572 (573)
T PRK05605 510 VVAAVVLEPGAALDPEGLRAYCREHLTRYKVPRRFYHVDELPRDQLGKVRRREVREELLEKLG 572 (573)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHhCccccCCcEEEEeccCCCCCcccccHHHHHHHHHHHhc
Confidence 888888877766778899999999999999999999999999999999999999999987653
No 32
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.96 E-value=1.7e-28 Score=187.07 Aligned_cols=138 Identities=30% Similarity=0.529 Sum_probs=129.1
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.|...|. ++||+|||+++++++|.++++||.|++|+++|.+|+|.+||+.+.++++|.++++++..+...++.
T Consensus 359 y~~~~~~~~~~~~-~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~ 437 (497)
T PRK06145 359 YWKDPEKTAEAFY-GDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGER 437 (497)
T ss_pred hcCChHHHHHHHh-CCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCce
Confidence 8999999999985 899999999999999999999999999999999999999999999999999999999988877788
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHH
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLA 139 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~ 139 (145)
+++++++......+..++.++++++++.++.|..+.+++++|+|++||++|++|+++++
T Consensus 438 ~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 438 ITAVVVLNPGATLTLEALDRHCRQRLASFKVPRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHhhhcCCCCCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 88888887666667889999999999999999999999999999999999999999875
No 33
>PRK09274 peptide synthase; Provisional
Probab=99.96 E-value=2.1e-28 Score=188.97 Aligned_cols=142 Identities=21% Similarity=0.327 Sum_probs=120.4
Q ss_pred CCCChhhhhccc--CCCC--eeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCC
Q 038977 1 YLNDPEATAATI--DVEG--LLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEV 76 (145)
Q Consensus 1 Y~~~~~~t~~~~--~~~~--~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~ 76 (145)
||++|+.|...| +.+| ||+|||++++|++|.+++.||.||+|+++|.+|+|.+||+.|.++|.|.++++++.++.
T Consensus 401 Y~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~~~~~- 479 (552)
T PRK09274 401 YYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCERIFNTHPGVKRSALVGVGVP- 479 (552)
T ss_pred ccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHHHHHhCcccceeEEEEeCCC-
Confidence 999999999876 3356 99999999999999999999999999999999999999999999999999999998775
Q ss_pred CCceeEEEEEeCCCCccCHHHHHHHHHhcccc---ccCceEEEEeccCCCC--CCCcccHHHHHHHHHccCC
Q 038977 77 AGEVPVAFVVRSNGFELTEEAIKEYIAKQVVF---YKRLHKVHFVHAIPKS--PSGKILRKDLIAKLASSMP 143 (145)
Q Consensus 77 ~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~---~~~p~~~~~v~~~p~t--~~gK~~r~~l~~~~~~~~~ 143 (145)
.++.+++++++..+...+..++.+.+++.+.. ...|..+.++++||+| ++||++|++|++++.+...
T Consensus 480 ~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~lP~t~~~~GKi~r~~L~~~~~~~~~ 551 (552)
T PRK09274 480 GAQRPVLCVELEPGVACSKSALYQELRALAAAHPHTAGIERFLIHPSFPVDIRHNAKIFREKLAVWAAKQLK 551 (552)
T ss_pred CCceEEEEEEccCccccchHHHhhhhHHHHHhcCCCcceeEEeccCCCCccccccccccHHHHHHHHHHhhc
Confidence 45667778877766555555566666555544 4577889999999999 7999999999999887653
No 34
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.96 E-value=3.4e-28 Score=185.66 Aligned_cols=141 Identities=30% Similarity=0.464 Sum_probs=131.3
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+++.|..++||+|||+++++++|.+++.||.||+|+++|.+|+|.+||+.+..+++|.++++++.++...++.
T Consensus 362 y~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~ 441 (504)
T PRK07514 362 YWRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEG 441 (504)
T ss_pred ccCCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCce
Confidence 89999999999987899999999999999999999999999999999999999999999999999999999988777778
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
++++++.......+..++.+.+++.++.++.|..+++++++|+|++||++|++|++++.+.
T Consensus 442 ~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~~ 502 (504)
T PRK07514 442 VTAVVVPKPGAALDEAAILAALKGRLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYADL 502 (504)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHhhcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 8888888776666778999999999999999999999999999999999999999988754
No 35
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.96 E-value=1.5e-28 Score=189.71 Aligned_cols=132 Identities=38% Similarity=0.693 Sum_probs=121.8
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||+++.. . + .+|||+|||++++|++|.+++.||.||+|+++|.+|+|.+||+.+.++|.|.++++++.++...++.
T Consensus 416 Y~~~~~~--~-~-~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~ 491 (549)
T PRK07788 416 YTDGRDK--Q-I-IDGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQR 491 (549)
T ss_pred ccCCCcc--c-c-cCCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccE
Confidence 7777664 2 2 3799999999999999999999999999999999999999999999999999999999999888889
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHH
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIA 136 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~ 136 (145)
+++++++..+...+.+++.+.++++++.+++|..+++++++|+|++||++|++|++
T Consensus 492 ~~a~vv~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~ 547 (549)
T PRK07788 492 LRAFVVKAPGAALDEDAIKDYVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELRE 547 (549)
T ss_pred EEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhc
Confidence 99999888776678889999999999999999999999999999999999999975
No 36
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.96 E-value=4e-28 Score=186.88 Aligned_cols=140 Identities=32% Similarity=0.508 Sum_probs=128.5
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++|+.|...|..+|||+|||++++|++|.+++.||.+++++++|.+|+|.+||+.+..++.|.++++++.+. .++..
T Consensus 391 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~-~~~~~ 469 (540)
T PRK06164 391 YLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVGATR-DGKTV 469 (540)
T ss_pred ccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEecCC-CCcee
Confidence 89999999999988999999999999999999999999999999999999999999999999999999998874 34567
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCC---cccHHHHHHHHHcc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSG---KILRKDLIAKLASS 141 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~g---K~~r~~l~~~~~~~ 141 (145)
+++++++..+...+.+++.+.++++++.+++|..+++++.+|+|++| |++|+.|++++.+.
T Consensus 470 ~~~~vv~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~~~ 533 (540)
T PRK06164 470 PVAFVIPTDGASPDEAGLMAACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREMAQAR 533 (540)
T ss_pred EEEEEEeCCCCCCCHHHHHHHHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHHHHHh
Confidence 78888877666677889999999999999999999999999999999 99999999987654
No 37
>PRK08315 AMP-binding domain protein; Validated
Probab=99.96 E-value=4.6e-28 Score=187.12 Aligned_cols=144 Identities=36% Similarity=0.594 Sum_probs=132.6
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++|+.++..|..++||+|||+++++++|.++++||.+++++++|.+|++.+||+.+.+++.|.++++++..+...++.
T Consensus 412 y~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~ 491 (559)
T PRK08315 412 YWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLYTHPKIQDVQVVGVPDEKYGEE 491 (559)
T ss_pred hcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHHhCCCceEEEEEecCCCCCCeE
Confidence 89999999999877999999999999999999999999999999999999999999999999999999999988776778
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccCCC
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSMPL 144 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~~~ 144 (145)
+++++.+......+.+++.+.+.+.++.+++|..+++++.+|+|++||++|.+|++++....++
T Consensus 492 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GK~~r~~L~~~~~~~~~~ 555 (559)
T PRK08315 492 VCAWIILRPGATLTEEDVRDFCRGKIAHYKIPRYIRFVDEFPMTVTGKIQKFKMREMMIEELGL 555 (559)
T ss_pred EEEEEEeCCCCCCCHHHHHHHHHhhcccccCCcEEEEcccCCCCCCCceeHHHHHHHHHhhhch
Confidence 8888887766566778999999999999999999999999999999999999999998776653
No 38
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.96 E-value=3.3e-28 Score=186.24 Aligned_cols=141 Identities=34% Similarity=0.568 Sum_probs=131.9
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+++.|. +|||+|||+++++++|.+++.||.|++++++|.+|+|.+||+.+.+++.|.++++++.++...++.
T Consensus 381 y~~~~~~~~~~~~-~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~ 459 (523)
T PRK08316 381 YWDDPEKTAEAFR-GGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEA 459 (523)
T ss_pred hcCCHHHHHHHhh-CCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCcccCCe
Confidence 8899999999985 899999999999999999999999999999999999999999999999999999999998888888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
++++++.........+++.+.++++++.++.|..+++++++|+|++||++|++|+++|.+.+
T Consensus 460 ~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~~~ 521 (523)
T PRK08316 460 VTAVVVPKAGATVTEDELIAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAGAF 521 (523)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHhhc
Confidence 88888887766667788999999999999999999999999999999999999999998654
No 39
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.96 E-value=5.1e-28 Score=189.53 Aligned_cols=140 Identities=34% Similarity=0.454 Sum_probs=124.4
Q ss_pred CCCChhhhhccc---CCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCC
Q 038977 1 YLNDPEATAATI---DVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVA 77 (145)
Q Consensus 1 Y~~~~~~t~~~~---~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~ 77 (145)
||++++.+.+.+ ..++||+|||++++|++|.+++.||.||+||++|.+|+|.+||++|.++|.|.++++++.++...
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vvg~~d~~~ 534 (629)
T PRK10524 455 VWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESISSHPAVAEVAVVGVKDALK 534 (629)
T ss_pred ccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHHhCCCcceEEEEccccCCC
Confidence 788887766543 24689999999999999999999999999999999999999999999999999999999999888
Q ss_pred CceeEEEEEeCCCCcc--------CHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 78 GEVPVAFVVRSNGFEL--------TEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 78 ~~~~~~~v~~~~~~~~--------~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
++.+++++++..+... ..+++.+.+++.++.+++|..+++++.||+|++||++|+.|++.++.
T Consensus 535 g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~ 605 (629)
T PRK10524 535 GQVAVAFVVPKDSDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGKLLRRAIQAIAEG 605 (629)
T ss_pred CeEEEEEEEECCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHcC
Confidence 8888999887664322 23678899999999999999999999999999999999999988753
No 40
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.96 E-value=4.9e-29 Score=180.54 Aligned_cols=141 Identities=32% Similarity=0.564 Sum_probs=133.4
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||+.|+-|+++|+.+|||+|||++++|++|++.+.||.+|+|+.+|++|..++||+.|..||.|.++.+++.++...|+.
T Consensus 399 Yyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVampDelLGEk 478 (542)
T COG1021 399 YYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVAMPDELLGEK 478 (542)
T ss_pred eccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhcCchhhcCcc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhc-cccccCceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQ-VVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
.|++++.... ..+..++...+.+. +..+.+|.++.+++.+|.|+-|||+++.|++++....
T Consensus 479 sCAfiv~~~~-~~~~~qlr~~L~~~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~~~ 540 (542)
T COG1021 479 SCAFIVVKEP-PLRAAQLRRFLRERGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLASRL 540 (542)
T ss_pred eeEEEEecCC-CCCHHHHHHHHHHcchhhhcCCcceeecccCCCcccccccHHHHHHHhhhhc
Confidence 9999998764 36778999999876 9999999999999999999999999999999987654
No 41
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.96 E-value=2.2e-28 Score=193.80 Aligned_cols=135 Identities=26% Similarity=0.450 Sum_probs=120.5
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
|||+|+.+ +..+|||+|||+++++++|+++++||.||+||++|.+|+|.+||..+.+++.|.++++++.++...++.
T Consensus 353 Y~~~~~~~---~~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~ 429 (705)
T PRK06060 353 YWNRPDSP---VANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVAVRESTGAST 429 (705)
T ss_pred hhCCCccc---ccCCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCee
Confidence 89998865 335899999999999999999999999999999999999999999999999999999999988877778
Q ss_pred eEEEEEeCCCCccCH---HHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHH
Q 038977 81 PVAFVVRSNGFELTE---EAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKL 138 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~ 138 (145)
++++++.......+. .++.+.++++|+.+++|..++++++||+|++||++|++|++.+
T Consensus 430 ~~a~vv~~~~~~~~~~~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~ 490 (705)
T PRK06060 430 LQAFLVATSGATIDGSVMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQS 490 (705)
T ss_pred EEEEEEeccccCcChHHHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhc
Confidence 888887765433332 5788899999999999999999999999999999999999865
No 42
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=4.9e-28 Score=186.51 Aligned_cols=142 Identities=40% Similarity=0.592 Sum_probs=127.9
Q ss_pred CCCChhhhhccc---CCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCC
Q 038977 1 YLNDPEATAATI---DVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVA 77 (145)
Q Consensus 1 Y~~~~~~t~~~~---~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~ 77 (145)
||++++.|.+.| ++.+||+|||+++++++|.+++.||.||+++++|.+|+|.+||+.+.++++|.++++++.++...
T Consensus 398 Y~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~~~~ 477 (546)
T PRK08314 398 YWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYKHPAIQEACVIATPDPRR 477 (546)
T ss_pred ccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHhCcchheEEEEeCCCccc
Confidence 899999998887 33569999999999999999999999999999999999999999999999999999999988877
Q ss_pred CceeEEEEEeCCCC--ccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 78 GEVPVAFVVRSNGF--ELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 78 ~~~~~~~v~~~~~~--~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
++.+++++++..+. ..+..++.+++++.++.+++|..++++++||+|.+||++|++|++......
T Consensus 478 ~~~~~a~v~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r~~L~~~~~~~~ 544 (546)
T PRK08314 478 GETVKAVVVLRPEARGKTTEEEIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILWRQLQEQEKARA 544 (546)
T ss_pred CceeEEEEEECCCCCCCCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHhhhc
Confidence 88888888877653 234578999999999999999999999999999999999999988766543
No 43
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.96 E-value=6.6e-28 Score=186.13 Aligned_cols=142 Identities=35% Similarity=0.542 Sum_probs=131.6
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||+++..+...|..++||+|||+++++++|.+++.||.+++++++|.+|+|.+||+.+.+++.|.++++++.++...++.
T Consensus 413 y~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~ 492 (558)
T PRK12583 413 YWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFTHPAVADVQVFGVPDEKYGEE 492 (558)
T ss_pred hcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHHhCCCeeEEEEEeeecCCCCcE
Confidence 89999999998877999999999999999999999999999999999999999999999999999999999988777788
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
++++++...+...+..++.+.++++|+.++.|..+++++++|+|++||++|++|+++..+..
T Consensus 493 ~~~~v~~~~~~~~~~~~i~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~r~~L~~~~~~~~ 554 (558)
T PRK12583 493 IVAWVRLHPGHAASEEELREFCKARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMREISIEEL 554 (558)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHhhcccCcCCcEEEEeccCCCCCCCCccHHHHHHHHHhhc
Confidence 88888877666667789999999999999999999999999999999999999999887654
No 44
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=2.7e-28 Score=189.34 Aligned_cols=141 Identities=28% Similarity=0.466 Sum_probs=126.8
Q ss_pred CCCChhhh----------------hcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCc
Q 038977 1 YLNDPEAT----------------AATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSI 64 (145)
Q Consensus 1 Y~~~~~~t----------------~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v 64 (145)
||++++.| ...|..+|||+|||+++++++|.+++.||.+++|+++|.+|+|.+||..|.++|.|
T Consensus 399 Y~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~p~v 478 (576)
T PRK05620 399 YYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIMAAPEV 478 (576)
T ss_pred ccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHhcCCCc
Confidence 89998887 33344579999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeecCCCCCceeEEEEEeCCCCc---cCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 65 ADATVVPQKDEVAGEVPVAFVVRSNGFE---LTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
.++++++.++...++.+++++.+..+.. ...+++.+.++++|+.++.|..+++++++|+|.+||++|+.|++++.++
T Consensus 479 ~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv~r~~L~~~~~~~ 558 (576)
T PRK05620 479 VECAVIGYPDDKWGERPLAVTVLAPGIEPTRETAERLRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKFDKKDLRQHLADG 558 (576)
T ss_pred eEEEEEeccCCCcCceeEEEEEecCCCCcccccHHHHHHHHHhhCccccCCeEEEEeccCCCCCcccCcHHHHHHHHhcC
Confidence 9999999999888888888877765533 3468899999999999999999999999999999999999999998854
No 45
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.96 E-value=3.4e-28 Score=187.42 Aligned_cols=139 Identities=32% Similarity=0.532 Sum_probs=129.2
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.|.+.|..+|||+|||++++|++|.+++.||.+|+++++|.+|+|.+||..+.++++|.++++++.++...++.
T Consensus 394 Y~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~ 473 (536)
T PRK10946 394 YYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALVSMEDELMGEK 473 (536)
T ss_pred hcCCcccchhhcccCCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEEcCCCcccCce
Confidence 89999999999988999999999999999999999999999999999999999999999999999999999998887888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhc-cccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQ-VVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+++++++..+ .+..++.+.+.+. ++.++.|..+.+++++|+|++||++|++|++++.+.
T Consensus 474 ~~a~vv~~~~--~~~~~l~~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~ 533 (536)
T PRK10946 474 SCAFLVVKEP--LKAVQLRRFLREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASR 533 (536)
T ss_pred EEEEEEeCCC--CCHHHHHHHHHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhh
Confidence 8888887654 6778899999875 999999999999999999999999999999987654
No 46
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.96 E-value=3.5e-28 Score=186.05 Aligned_cols=141 Identities=22% Similarity=0.302 Sum_probs=114.3
Q ss_pred CCCChhhhhcccCC--------CCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhc-CCCcceEEEEe
Q 038977 1 YLNDPEATAATIDV--------EGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLS-HPSIADATVVP 71 (145)
Q Consensus 1 Y~~~~~~t~~~~~~--------~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~-~~~v~~~~~~~ 71 (145)
||+++ .++..+++ .+||+|||++++|++|+++++||.||+||++|.+|+|.+||+.|.+ +|.|.++.+++
T Consensus 335 y~~~~-~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~~~p~V~~aavvg 413 (499)
T PLN03051 335 LLNAD-HDKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSVEIERACDRAVAGIAETAAVG 413 (499)
T ss_pred ccCCc-ccceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHHHHHHHHHhcCCCcceEEEEE
Confidence 78765 34433322 1278999999999999999999999999999999999999999986 89999999999
Q ss_pred ecCCCCC-ceeEEEE---EeCCCC-ccCHHHHHHHH----HhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 72 QKDEVAG-EVPVAFV---VRSNGF-ELTEEAIKEYI----AKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 72 ~~~~~~~-~~~~~~v---~~~~~~-~~~~~~l~~~l----~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
.++..++ +.+++++ ++..+. ..+.+++.+.+ .++++.+..|..+.++++||+|++||++|++|++.+.+..
T Consensus 414 ~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 493 (499)
T PLN03051 414 VAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAIQTNLNPLFKVSRVKIVPELPRNASNKLLRRVLRDQLKKEL 493 (499)
T ss_pred ecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHHHhhcCCccCCceEEEcCCCCCCCCccHHHHHHHHHHHHhh
Confidence 9988888 5777777 555543 34455565554 4557776777789999999999999999999999887654
No 47
>PRK06178 acyl-CoA synthetase; Validated
Probab=99.96 E-value=4.3e-28 Score=187.78 Aligned_cols=139 Identities=39% Similarity=0.638 Sum_probs=128.7
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+++.|. +|||+|||+++++++|+++++||++|+++++|.+|+|.+||+.+.+++.|.++++++.++...++.
T Consensus 428 Y~~~~~~~~~~~~-dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~ 506 (567)
T PRK06178 428 YWNKPEATAEALR-DGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAVLGSAVVGRPDPDKGQV 506 (567)
T ss_pred ccCChhhhhhccc-CCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCeeEEEEEcCcCcccCcc
Confidence 8999999999885 889999999999999999999999999999999999999999999999999999999888777788
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+++++++..+...+.+++.+.++++++.+.+|. +++++++|+|++||++|++|++++++.
T Consensus 507 ~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~-i~~v~~iP~t~~GKv~r~~l~~~~~~~ 566 (567)
T PRK06178 507 PVAFVQLKPGADLTAAALQAWCRENMAVYKVPE-IRIVDALPMTATGKVRKQDLQALAEEL 566 (567)
T ss_pred eEEEEEeCCCCcCCHHHHHHHHHhcCcccCCce-EEEeccCCCCCccceeHHHHHHHHHhh
Confidence 888888877666678899999999999999997 888999999999999999999988753
No 48
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.96 E-value=2.6e-28 Score=185.40 Aligned_cols=135 Identities=38% Similarity=0.667 Sum_probs=124.6
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeec-CCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCc
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRV-KEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGE 79 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~-d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~ 79 (145)
||++++.|.+.|..+|||+|||+++++++|.+++.||. |++++++|.+|+|.+||+.+.+++.|.++++++.++...++
T Consensus 335 y~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~ 414 (471)
T PRK07787 335 YLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQ 414 (471)
T ss_pred hcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCe
Confidence 89999999999987999999999999999999999996 89999999999999999999999999999999998887778
Q ss_pred eeEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHH
Q 038977 80 VPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAK 137 (145)
Q Consensus 80 ~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~ 137 (145)
.++++++... ..+.+++.+.+++.++.++.|..++++++||+|++||++|++|+++
T Consensus 415 ~~~a~v~~~~--~~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi~r~~L~~~ 470 (471)
T PRK07787 415 RIVAYVVGAD--DVAADELIDFVAQQLSVHKRPREVRFVDALPRNAMGKVLKKQLLSE 470 (471)
T ss_pred EEEEEEEeCC--CCCHHHHHHHHHhhcccccCCcEEEEeccCCCCCCccccHHHhccC
Confidence 8888887733 3567889999999999999999999999999999999999999753
No 49
>PRK07798 acyl-CoA synthetase; Validated
Probab=99.96 E-value=4.5e-28 Score=185.74 Aligned_cols=140 Identities=30% Similarity=0.349 Sum_probs=129.1
Q ss_pred CCCChhhhhcccC---CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCC
Q 038977 1 YLNDPEATAATID---VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVA 77 (145)
Q Consensus 1 Y~~~~~~t~~~~~---~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~ 77 (145)
||+++..|++.|. +.+||+|||++++|++|++++.||.|++++++|.+|+|.+||+.+.+++.|.++++++.++...
T Consensus 390 y~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~ 469 (533)
T PRK07798 390 YYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALKAHPDVADALVVGVPDERW 469 (533)
T ss_pred ccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHHhCccceeEEEEeccCccc
Confidence 8999999999883 3469999999999999999999999999999999999999999999999999999999888777
Q ss_pred CceeEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 78 GEVPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 78 ~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
++.+.+++++..+...+.+++.+.+++.++.+.+|..+++++++|+|++||++|+.|+++..+
T Consensus 470 ~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~~~~~~~~~~~ 532 (533)
T PRK07798 470 GQEVVAVVQLREGARPDLAELRAHCRSSLAGYKVPRAIWFVDEVQRSPAGKADYRWAKEQAAE 532 (533)
T ss_pred CceEEEEEEECCCCCCCHHHHHHHHhhhcccCCCCeEEEEcccCCCCCcchhhHHHHhhhhcc
Confidence 788888888777666788999999999999999999999999999999999999999998765
No 50
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=5e-28 Score=187.28 Aligned_cols=141 Identities=38% Similarity=0.621 Sum_probs=131.1
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+...|. +|||+|||+++++++|.++++||.||+|+++|.+|+|.+||+.+.+++.|.++++++.++...++.
T Consensus 417 Y~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~g~~ 495 (563)
T PRK06710 417 YWNKPEETAAVLQ-DGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVTIGVPDPYRGET 495 (563)
T ss_pred hhCChHHHhhhcc-cCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcceeeEEEEccccCCcCce
Confidence 8999999999885 899999999999999999999999999999999999999999999999999999999998877888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
+++++....+...+.+++.+.+.++++.++.|..+.++++||+|++||++|++|++++...-
T Consensus 496 ~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~r~~L~~~~~~~~ 557 (563)
T PRK06710 496 VKAFVVLKEGTECSEEELNQFARKYLAAYKVPKVYEFRDELPKTTVGKILRRVLIEEEKRKN 557 (563)
T ss_pred eEEEEEECCCCCCCHHHHHHHHHHhcccccCCcEEEEcccCCCCccchhhHHHHHHHHhhcC
Confidence 88888887776667889999999999999999999999999999999999999999886544
No 51
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.96 E-value=5.2e-28 Score=184.23 Aligned_cols=137 Identities=29% Similarity=0.499 Sum_probs=125.5
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||+++..+...+ .+|||+|||++++|++|++++.||++|+|+++|.+|+|.+||+.+.++|.|.++++++..+...++.
T Consensus 347 y~~~~~~~~~~~-~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~ 425 (487)
T PRK07638 347 YIIGGVLARELN-ADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEK 425 (487)
T ss_pred ecCCHHHHhhhc-cCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCe
Confidence 899998887776 4899999999999999999999999999999999999999999999999999999999998877778
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
+++++.. ..+..++.+.+++.++.+++|..+++++++|+|++||++|++|++++.+..
T Consensus 426 ~~~~v~~----~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~ 483 (487)
T PRK07638 426 PVAIIKG----SATKQQLKSFCLQRLSSFKIPKEWHFVDEIPYTNSGKIARMEAKSWIENQE 483 (487)
T ss_pred eEEEEEC----CCCHHHHHHHHHHHhhcccCCcEEEEecccCCCCcccccHHHHHHHHhccc
Confidence 7777753 356788999999999999999999999999999999999999999987754
No 52
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.96 E-value=3.3e-28 Score=186.99 Aligned_cols=134 Identities=34% Similarity=0.581 Sum_probs=124.7
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.|.+.|..+|||+|||+++++++|++++.||.+|+|+++|.+|+|.+||+.+.++|.|.++++++.++...++.
T Consensus 393 Y~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~ 472 (527)
T TIGR02275 393 YYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVSMPDELLGEK 472 (527)
T ss_pred hcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEecCCcccccE
Confidence 89999999999988999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhc-cccccCceEEEEeccCCCCCCCcccHHHHH
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQ-VVFYKRLHKVHFVHAIPKSPSGKILRKDLI 135 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~ 135 (145)
+++++++... ..+..++.+++++. ++.+++|..+.++++||+|++||++|+.|+
T Consensus 473 ~~a~vv~~~~-~~~~~~l~~~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 473 SCAFIVVRDP-ALKAAQLRRFLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred EEEEEEECCC-CCCHHHHHHHHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 8888877654 46778999999985 999999999999999999999999999863
No 53
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.96 E-value=2.9e-28 Score=189.94 Aligned_cols=139 Identities=24% Similarity=0.291 Sum_probs=120.1
Q ss_pred CChhhhhccc------CCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCC
Q 038977 3 NDPEATAATI------DVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEV 76 (145)
Q Consensus 3 ~~~~~t~~~~------~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~ 76 (145)
+++..|...| .+++||+|||+|+++++|.+++.||.||+||++|.+|+|.+||+.+.++|+|.++++++.+...
T Consensus 420 ~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~~~p~V~~a~v~gv~~~~ 499 (600)
T PRK08279 420 TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALSGFPGVEEAVVYGVEVPG 499 (600)
T ss_pred CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHhcCCCcceEEEEEeecCC
Confidence 7788887765 2468999999999999999999999999999999999999999999999999999999887553
Q ss_pred -CCceeEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 77 -AGEVPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 77 -~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
.+...+++++..++...+..++.+.++++|+.+++|..+++++++|+|.+||++|++|++++.+.
T Consensus 500 ~~~~~~~~~vv~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 500 TDGRAGMAAIVLADGAEFDLAALAAHLYERLPAYAVPLFVRLVPELETTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred CCCccceeEEEecCCccCCHHHHHHHHHhhCccccCCeEEEeecCCCCCcchhhhHHHHhhcCCCc
Confidence 23444455555545556778999999999999999999999999999999999999999876554
No 54
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.96 E-value=8.9e-28 Score=185.43 Aligned_cols=139 Identities=35% Similarity=0.519 Sum_probs=127.4
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++|+.|+.. .+|||+|||+++++++|++++.||.+++++++|.+|+|.+||+.+.+++.|.++++++.++...++.
T Consensus 406 Y~~~~~~t~~~--~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~~~~v~~~~v~~~~~~~~g~~ 483 (547)
T PRK13295 406 YLKRPQLNGTD--ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLYRHPAIAQVAIVAYPDERLGER 483 (547)
T ss_pred ccCCccccccC--CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHHhCCCeeeEEEEeeecCCCCcE
Confidence 89999988776 4789999999999999999999999999999999999999999999999999999999988878888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHh-ccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAK-QVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+++++++..+...+..++.+.+.+ .++.+++|..++++++||+|.+||++|.+|++++.+.
T Consensus 484 ~~~~v~~~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r~~L~~~~~~~ 545 (547)
T PRK13295 484 ACAFVVPRPGQSLDFEEMVEFLKAQKVAKQYIPERLVVRDALPRTPSGKIQKFRLREMLRGE 545 (547)
T ss_pred EEEEEEeCCCCCCCHHHHHHHHHhccCccccCCcEEEEeccCCCCCCccccHHHHHHHHhcC
Confidence 888888877656667889999986 7999999999999999999999999999999988653
No 55
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.96 E-value=5.3e-28 Score=186.57 Aligned_cols=139 Identities=26% Similarity=0.386 Sum_probs=120.6
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.|.+.|. +|||+|||++++|++|++++.||.+++|+++|.+|+|.+||..+..+|.|.++++++.++...++.
T Consensus 388 Y~~~~~~t~~~~~-~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~~~~ 466 (540)
T PRK05857 388 YWNNPERTAEVLI-DGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACYEIPDEEFGAL 466 (540)
T ss_pred hhCCccchhhhcC-CCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEEecCccccccc
Confidence 8999999999985 899999999999999999999999999999999999999999999999999999999988777777
Q ss_pred eEEEEEeCCCCccC-H----HHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 81 PVAFVVRSNGFELT-E----EAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 81 ~~~~v~~~~~~~~~-~----~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
+++++......... . +.+.+.+++.++.+++|..+.+++++|+|++||++|+.|++.+..
T Consensus 467 ~~~~vv~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~~ 531 (540)
T PRK05857 467 VGLAVVASAELDESAARALKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASLAAAATA 531 (540)
T ss_pred eEEEEEeCCCCChhhHHHHHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHHHHhhhh
Confidence 77776655432211 2 234455567789999999999999999999999999999988764
No 56
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=3.5e-28 Score=190.54 Aligned_cols=140 Identities=27% Similarity=0.377 Sum_probs=121.1
Q ss_pred CCCChhhhhcccC-----------------CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhc-CC
Q 038977 1 YLNDPEATAATID-----------------VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLS-HP 62 (145)
Q Consensus 1 Y~~~~~~t~~~~~-----------------~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~-~~ 62 (145)
||++++.|++.|. .+|||+|||+|+++ +|.++++||.||+||++|.+|+|.+||..+.+ +|
T Consensus 432 Y~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p 510 (631)
T PRK07769 432 YWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATK 510 (631)
T ss_pred ccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccc
Confidence 9999999999884 24899999999994 99999999999999999999999999999986 79
Q ss_pred Ccce--EEEEeecC-------------------CCCCceeEEEEEeCCCC-ccCHHHHHHHHHhcccc-cc-CceEEEEe
Q 038977 63 SIAD--ATVVPQKD-------------------EVAGEVPVAFVVRSNGF-ELTEEAIKEYIAKQVVF-YK-RLHKVHFV 118 (145)
Q Consensus 63 ~v~~--~~~~~~~~-------------------~~~~~~~~~~v~~~~~~-~~~~~~l~~~l~~~l~~-~~-~p~~~~~v 118 (145)
.|.+ +.+++.++ ...++.+++++++..+. ..+..++.++++++++. +. .|..+.++
T Consensus 511 ~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~ge~~~a~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~~~~v 590 (631)
T PRK07769 511 ALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTSEQLVIVAERAPGAHKLDPQPIADDIRAAIAVRHGVTVRDVLLV 590 (631)
T ss_pred cccCCcEEEEEecccccccccccccccccccccCCCCccEEEEEEecCccccccHHHHHHHHHHHHHHHcCCCccEEEEE
Confidence 9987 88888887 44677888888877653 45678999999999996 55 47788888
Q ss_pred c--cCCCCCCCcccHHHHHHHHHcc
Q 038977 119 H--AIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 119 ~--~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+ .||+|++||++|++|++.+.++
T Consensus 591 ~~~~lP~t~~GKi~r~~l~~~~~~~ 615 (631)
T PRK07769 591 PAGSIPRTSSGKIARRACRAAYLDG 615 (631)
T ss_pred CCCccccCCCcHHHHHHHHHHHHcC
Confidence 6 6999999999999999988654
No 57
>PRK13390 acyl-CoA synthetase; Provisional
Probab=99.96 E-value=5.7e-28 Score=184.59 Aligned_cols=135 Identities=32% Similarity=0.512 Sum_probs=122.1
Q ss_pred CCCChhhhhcccC--CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCC
Q 038977 1 YLNDPEATAATID--VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAG 78 (145)
Q Consensus 1 Y~~~~~~t~~~~~--~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~ 78 (145)
||++|+.|++.|. .++|++|||++++|++|.+++.||.|++++++|.+|+|.+||+.+.+++.|.++++++.++...+
T Consensus 362 y~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~ 441 (501)
T PRK13390 362 YLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMG 441 (501)
T ss_pred ccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccC
Confidence 8999999998874 36899999999999999999999999999999999999999999999999999999999988888
Q ss_pred ceeEEEEEeCCCCccC---HHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHH
Q 038977 79 EVPVAFVVRSNGFELT---EEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLI 135 (145)
Q Consensus 79 ~~~~~~v~~~~~~~~~---~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~ 135 (145)
+.+++++.+..+.... .+++.+.++.+++.++.|..++++++||+|++||++|++|+
T Consensus 442 e~~~~~v~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 442 EQVKAVIQLVEGIRGSDELARELIDYTRSRIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred ceeEEEEEecCCCCcchhhHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 8888888776553322 35788999999999999999999999999999999999874
No 58
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.96 E-value=7.9e-28 Score=182.12 Aligned_cols=138 Identities=24% Similarity=0.321 Sum_probs=125.8
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+.... .+|||+|||++++| +|.+++.||+||+|+++|.+|+|.+||+.+.+++.|.++++++.++...++.
T Consensus 318 Y~~~~~~~~~~~-~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~ 395 (458)
T PRK09029 318 YWRQGQLVPLVN-DEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQR 395 (458)
T ss_pred eecCcccccccc-CCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCce
Confidence 888888876554 58999999999999 9999999999999999999999999999999999999999999999888888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
+++++.... ..+..++.+.++++++.++.|..+++++.+|+|.+||++|+.|++++.+..
T Consensus 396 ~~a~v~~~~--~~~~~~l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~~ 455 (458)
T PRK09029 396 PVAVVESDS--EAAVVNLAEWLQDKLARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQL 455 (458)
T ss_pred EEEEEEcCc--ccCHHHHHHHHHhhchhccCCeEEEEecccccCcCCCcCHHHHHHHHHhcc
Confidence 888887653 356789999999999999999999999999999999999999999987653
No 59
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=9.8e-28 Score=183.24 Aligned_cols=136 Identities=44% Similarity=0.750 Sum_probs=126.9
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||+++..+...+..+|||+|||+++++++|.++++||.||+++++|.+++|.+||+.+.++++|.++++++.++...++.
T Consensus 377 y~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~ 456 (513)
T PRK07656 377 YYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEV 456 (513)
T ss_pred hcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCce
Confidence 89999999999977899999999999999999999999999999999999999999999999999999999988877888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHH
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIA 136 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~ 136 (145)
+++++....+...+..++.+++++.++.+++|..+.+++++|+|++||++|++|++
T Consensus 457 ~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 457 GKAYVVLKPGAELTEEELIAYCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 88888877656677789999999999999999999999999999999999999875
No 60
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.96 E-value=2.6e-28 Score=204.44 Aligned_cols=136 Identities=26% Similarity=0.413 Sum_probs=119.5
Q ss_pred CCCChhhhhcccC----------------------------CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChH
Q 038977 1 YLNDPEATAATID----------------------------VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPA 52 (145)
Q Consensus 1 Y~~~~~~t~~~~~----------------------------~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~ 52 (145)
|||+|+.|+++|. .++||+|||++++++||.++++||.||+||++|.+|+|.
T Consensus 635 Y~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~Iki~G~rI~p~ 714 (1389)
T TIGR03443 635 YLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQVKIRGFRIELG 714 (1389)
T ss_pred cCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCEEEeCcEEecHH
Confidence 9999999999883 258999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCC-c-------------------------cCHHHHHHHHHhcc
Q 038977 53 EIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGF-E-------------------------LTEEAIKEYIAKQV 106 (145)
Q Consensus 53 ~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~-~-------------------------~~~~~l~~~l~~~l 106 (145)
+||..|.++|.|.+++++...+...+..+++++++.... . ....++.+.++++|
T Consensus 715 eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L 794 (1389)
T TIGR03443 715 EIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKGLIKYRKLIKDIREYLKKKL 794 (1389)
T ss_pred HHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCccccccccccccccccccccchhhhhhhhhhHHHHHHHHHhhC
Confidence 999999999999999988887776677888887765211 0 01357888999999
Q ss_pred ccccCceEEEEeccCCCCCCCcccHHHHHH
Q 038977 107 VFYKRLHKVHFVHAIPKSPSGKILRKDLIA 136 (145)
Q Consensus 107 ~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~ 136 (145)
+.|++|..+++++.||+|++||++|++|..
T Consensus 795 p~y~~P~~~~~~~~lP~t~~GKidr~~L~~ 824 (1389)
T TIGR03443 795 PSYAIPTVIVPLKKLPLNPNGKVDKPALPF 824 (1389)
T ss_pred CcccCCceEEEcccCCCCCCccccHhhcCC
Confidence 999999999999999999999999999863
No 61
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.95 E-value=2.4e-28 Score=192.14 Aligned_cols=139 Identities=27% Similarity=0.331 Sum_probs=116.1
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEe-CcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCc
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKF-KGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGE 79 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~-~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~ 79 (145)
||++|+.|++.|..+|||+|||+|++|+||.++++||.+|+||+ +|++|+|.+||+.|.++|.|.++++++. ..++
T Consensus 472 Y~~~~~~t~~~~~~dgw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~ 548 (651)
T PLN02736 472 YYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNS 548 (651)
T ss_pred cccCHHHHHhhhccCCCeeccceEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCc
Confidence 99999999999987999999999999999999999999999997 7999999999999999999999999983 2456
Q ss_pred eeEEEEEeCCCC--------ccCHH---------HHH----HHH-----HhccccccCceEEEEeccCC------CCCCC
Q 038977 80 VPVAFVVRSNGF--------ELTEE---------AIK----EYI-----AKQVVFYKRLHKVHFVHAIP------KSPSG 127 (145)
Q Consensus 80 ~~~~~v~~~~~~--------~~~~~---------~l~----~~l-----~~~l~~~~~p~~~~~v~~~p------~t~~g 127 (145)
.+++++++.... ..+.. ++. +.+ ++.|+.+.+|+.|.++++.+ +|++|
T Consensus 549 ~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~ 628 (651)
T PLN02736 549 SLVAVVVVDPEVLKAWAASEGIKYEDLKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTF 628 (651)
T ss_pred eeEEEEEeCHHHHHHHHHHcCCCccCHHHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhh
Confidence 788888875421 11111 111 111 23599999999999998876 79999
Q ss_pred cccHHHHHHHHHccC
Q 038977 128 KILRKDLIAKLASSM 142 (145)
Q Consensus 128 K~~r~~l~~~~~~~~ 142 (145)
|++|+.+++.|.+.+
T Consensus 629 Ki~R~~i~~~~~~~i 643 (651)
T PLN02736 629 KVKRPQAKAYFAKAI 643 (651)
T ss_pred hhhHHHHHHHHHHHH
Confidence 999999999998765
No 62
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.95 E-value=1.8e-27 Score=184.31 Aligned_cols=136 Identities=39% Similarity=0.632 Sum_probs=125.1
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++|+.|.+.|..+|||+|||+++++++|.+++.||.+++++++|.+|+|.+||+.+.+++.|.++++++.++...++.
T Consensus 426 Y~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~ 505 (562)
T PRK12492 426 YWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVMAHPKVANCAAIGVPDERSGEA 505 (562)
T ss_pred cccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCce
Confidence 89999999999977899999999999999999999999999999999999999999999999999999999988777777
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHH
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAK 137 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~ 137 (145)
+++++..... ..+.+++.+.+.+.++.+.+|..+.+++++|+|++||++|++|++.
T Consensus 506 ~~~~v~~~~~-~~~~~~i~~~~~~~l~~~~~P~~i~~~~~~P~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 506 VKLFVVARDP-GLSVEELKAYCKENFTGYKVPKHIVLRDSLPMTPVGKILRRELRDI 561 (562)
T ss_pred EEEEEEeCCC-CCCHHHHHHHHHHhcccccCCcEEEEeccCCCCCCCceeHHHHHhh
Confidence 7777776543 3566889999999999999999999999999999999999999865
No 63
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=2e-27 Score=181.59 Aligned_cols=141 Identities=32% Similarity=0.594 Sum_probs=129.3
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+...+..+|||+|||+++++++|.+++.||.|++++++|.+|++.+||..+.++++|.++.+++..+...++.
T Consensus 354 y~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~ 433 (502)
T PRK08276 354 YHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGER 433 (502)
T ss_pred hcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCce
Confidence 89999999999986799999999999999999999999999999999999999999999999999999999988888888
Q ss_pred eEEEEEeCCCCccCH---HHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 81 PVAFVVRSNGFELTE---EAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+++++++..+..... +++.+.+++.++.++.|..+++++++|+|++||++|++|++.+...
T Consensus 434 ~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~~ 497 (502)
T PRK08276 434 VKAVVQPADGADAGDALAAELIAWLRGRLAHYKCPRSIDFEDELPRTPTGKLYKRRLRDRYWEG 497 (502)
T ss_pred EEEEEEECCCCCCChhhHHHHHHHHHhhccCCCCCcEEEEecCCCCCcccchhHHHHHHHHHhh
Confidence 999988876544332 4788999999999999999999999999999999999999997654
No 64
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.95 E-value=2.2e-27 Score=182.18 Aligned_cols=140 Identities=34% Similarity=0.504 Sum_probs=129.8
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||+++..+...|. +|||+|||+++++++|.+++.||.+++++++|.+|+|.+||+.+.++++|.++++++.++...++.
T Consensus 379 y~~~~~~~~~~~~-~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~ 457 (524)
T PRK06188 379 YWNRPEETAEAFR-DGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEA 457 (524)
T ss_pred hcCChHHhhhhhc-CCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCce
Confidence 8899999999985 899999999999999999999999999999999999999999999999999999999888777788
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+++++.+........+++.+.+.+.++.++.|..+++++.+|+|++||++|++|++.+.++
T Consensus 458 ~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~~~ 518 (524)
T PRK06188 458 VTAVVVLRPGAAVDAAELQAHVKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYWEG 518 (524)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHHhh
Confidence 8888888766666778999999999999999999999999999999999999999998654
No 65
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.95 E-value=3.5e-27 Score=180.52 Aligned_cols=139 Identities=31% Similarity=0.517 Sum_probs=128.0
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||+++..++..+ .++||+|||+++++++|.+++.||.||+++++|.+|+|.+||+.|.+++.|.++++++.++...++.
T Consensus 365 y~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~ 443 (509)
T PRK12406 365 YHNKPEKRAEID-RGGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEA 443 (509)
T ss_pred ccCCchhccccc-CCCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCce
Confidence 788898888776 5899999999999999999999999999999999999999999999999999999999988877778
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
+++++.+......+.+++.+.+++.++.+++|..+.+++++|+|++||++|++|++.+..
T Consensus 444 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~ 503 (509)
T PRK12406 444 LMAVVEPQPGATLDEADIRAQLKARLAGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWA 503 (509)
T ss_pred eEEEEEECCCCCCCHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccchhHHHHHHHHHh
Confidence 888888776655677899999999999999999999999999999999999999988754
No 66
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=2.4e-27 Score=182.79 Aligned_cols=137 Identities=28% Similarity=0.457 Sum_probs=123.9
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||+++. ..+. +|||+|||++++|++|.+++.||.+|+++++|.+|+|.+||+.+..+|.|.++++++.++...++.
T Consensus 398 y~~~~~---~~~~-~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~ 473 (539)
T PRK07008 398 YFRGDA---SPLV-DGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIACAHPKWDER 473 (539)
T ss_pred hcCChh---hhhc-CCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccc
Confidence 777773 2343 789999999999999999999999999999999999999999999999999999999998877788
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+++++....+...+.+++.++++++++.++.|..+++++.+|+|++||++|++|++.+.+.
T Consensus 474 ~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~~~~~~ 534 (539)
T PRK07008 474 PLLVVVKRPGAEVTREELLAFYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLREQFRDY 534 (539)
T ss_pred eEEEEEeCCCCccCHHHHHHHHHhhcccccCCeEEEEecCCCCCCccceeHHHHHHHHHhh
Confidence 8888877766666778999999999999999999999999999999999999999988754
No 67
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.95 E-value=2.1e-27 Score=183.66 Aligned_cols=136 Identities=37% Similarity=0.595 Sum_probs=124.4
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+++.|..+|||+|||++++|++|.+++.||.+|+++++|.+|+|.+||+.+..++.|.++++++.++...++.
T Consensus 422 y~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~ge~ 501 (560)
T PRK08751 422 YWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIAMMPGVLEVAAVGVPDEKSGEI 501 (560)
T ss_pred hcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHHhCcCeeeeEEEecCCCCCCce
Confidence 89999999999988899999999999999999999999999999999999999999999999999999999988777776
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHH
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAK 137 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~ 137 (145)
+.+++... ....+..++.+.+.+.++.++.|..+.+++.||+|++||++|++|++.
T Consensus 502 ~~~~v~~~-~~~~~~~~l~~~~~~~l~~~~~P~~v~~v~~lP~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 502 VKVVIVKK-DPALTAEDVKAHARANLTGYKQPRIIEFRKELPKTNVGKILRRELRDA 557 (560)
T ss_pred EEEEEEcC-CCCCCHHHHHHHHHHhhhhccCCeEEEEhhhCCCCccccccHHHHHHh
Confidence 66666544 344567889999999999999999999999999999999999999876
No 68
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=3.9e-27 Score=181.68 Aligned_cols=141 Identities=36% Similarity=0.606 Sum_probs=128.2
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.++..|. +|||+|||+++++++|.+++.||.+++++++|.+|+|.+||+.+.+++.|.++++++......++.
T Consensus 385 y~~~~~~~~~~f~-~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~ 463 (542)
T PRK07786 385 YWNNPEATAEAFA-GGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRADEKWGEV 463 (542)
T ss_pred hcCCHHHHHHHhh-CCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCcccCce
Confidence 8999999999995 899999999999999999999999999999999999999999999999999999998887777777
Q ss_pred eEEEEEeCCCC-ccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 81 PVAFVVRSNGF-ELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 81 ~~~~v~~~~~~-~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
+++++...... .....++.+.+++.++.++.|..+++++.||+|++||++|++|++++.+.-
T Consensus 464 ~~~~v~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~~ 526 (542)
T PRK07786 464 PVAVAAVRNDDAALTLEDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGACV 526 (542)
T ss_pred EEEEEEECCCCCCCCHHHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhhh
Confidence 77777766543 245688999999999999999999999999999999999999999987653
No 69
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.95 E-value=3e-27 Score=180.39 Aligned_cols=138 Identities=29% Similarity=0.395 Sum_probs=119.1
Q ss_pred CCCChhhhhccc---CCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeec-CCC
Q 038977 1 YLNDPEATAATI---DVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQK-DEV 76 (145)
Q Consensus 1 Y~~~~~~t~~~~---~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~-~~~ 76 (145)
||++++.|...| .+.+||+|||++++|++ .+++.||.+|+|+++|.+|+|.+||+.+.+++.|.++++++.. ...
T Consensus 356 y~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~ 434 (502)
T TIGR01734 356 YLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKYNKDH 434 (502)
T ss_pred ccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCC
Confidence 899999888876 34569999999999877 9999999999999999999999999999999999999999865 444
Q ss_pred CCceeEEEEEeCCCCccC----HHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHH
Q 038977 77 AGEVPVAFVVRSNGFELT----EEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLA 139 (145)
Q Consensus 77 ~~~~~~~~v~~~~~~~~~----~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~ 139 (145)
..+.+++++......... ..++.+.+++.++.+..|..+++++++|+|++||++|++|++++.
T Consensus 435 ~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 435 KVEYLIAAIVPETEDFEKEFQLTKAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred CceEEEEEEEecccccccchhhHHHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 556777777765432222 267889999999999999999999999999999999999999864
No 70
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.95 E-value=3e-27 Score=182.36 Aligned_cols=142 Identities=35% Similarity=0.517 Sum_probs=129.1
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+...|..+|||+|||+++++++|.++++||.+|+|+++|.+|+|.+||+.+.+++.|.++++++.++...++.
T Consensus 395 y~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~ 474 (547)
T PRK06087 395 YLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGER 474 (547)
T ss_pred ccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEecCCCCcCce
Confidence 89999999999977899999999999999999999999999999999999999999999999999999999988877888
Q ss_pred eEEEEEeCC-CCccCHHHHHHHHH-hccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 81 PVAFVVRSN-GFELTEEAIKEYIA-KQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 81 ~~~~v~~~~-~~~~~~~~l~~~l~-~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
+++++.... ....+..++.+.+. +.++.+++|..+.++++||+|.+||++|+.|++++.+.+
T Consensus 475 ~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~~ 538 (547)
T PRK06087 475 SCAYVVLKAPHHSLTLEEVVAFFSRKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMRRL 538 (547)
T ss_pred EEEEEEECCCCCCCCHHHHHHHHHhccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHHHh
Confidence 888888765 33455678888775 579999999999999999999999999999999998765
No 71
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.95 E-value=3.6e-27 Score=187.25 Aligned_cols=124 Identities=26% Similarity=0.283 Sum_probs=110.6
Q ss_pred CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCcc
Q 038977 14 VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFEL 93 (145)
Q Consensus 14 ~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 93 (145)
.+|||+|||++++|++|++++.||++|+|+++|++|+|.+||+.+.+++.+.++++++.++...++.+++++. +...
T Consensus 589 ~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~~avv~~~~~~~ge~~v~~~~---~~~~ 665 (718)
T PRK08043 589 ERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQHATAIKSDASKGEALVLFTT---DSEL 665 (718)
T ss_pred cCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccceEEEEEccCCCCCceEEEEEc---Cccc
Confidence 4799999999999999999999999999999999999999999999998888888888887777777776653 2335
Q ss_pred CHHHHHHHHHhc-cccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 94 TEEAIKEYIAKQ-VVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 94 ~~~~l~~~l~~~-l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
+.+++.++++++ ++.+++|..+.+++++|+|++||++|++|++++.+
T Consensus 666 ~~~~l~~~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 713 (718)
T PRK08043 666 TREKLQQYAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVDE 713 (718)
T ss_pred CHHHHHHHHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHhc
Confidence 667899999887 99999999999999999999999999999988765
No 72
>PRK13391 acyl-CoA synthetase; Provisional
Probab=99.95 E-value=6.1e-27 Score=179.37 Aligned_cols=140 Identities=31% Similarity=0.493 Sum_probs=126.7
Q ss_pred CCCChhhhhcccCCC-CeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCc
Q 038977 1 YLNDPEATAATIDVE-GLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGE 79 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~-~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~ 79 (145)
||++++.+...+..+ +||+|||+++++++|.+++.||.+++++++|.+|+|.+||+.+.+++.|.++++++.++...++
T Consensus 366 y~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~ 445 (511)
T PRK13391 366 YLNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGE 445 (511)
T ss_pred EcCChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCc
Confidence 899999999988544 9999999999999999999999999999999999999999999999999999999998888888
Q ss_pred eeEEEEEeCCCCcc---CHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 80 VPVAFVVRSNGFEL---TEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 80 ~~~~~v~~~~~~~~---~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
.+++++....+... ...++.++++++++.++.|..+.+++++|+|++||++|+.|++.+..
T Consensus 446 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 446 EVKAVVQPVDGVDPGPALAAELIAFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred eeEEEEEECCCCCcccchHHHHHHHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhc
Confidence 88888876654332 24789999999999999999999999999999999999999998864
No 73
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.95 E-value=5e-27 Score=178.42 Aligned_cols=137 Identities=42% Similarity=0.719 Sum_probs=125.3
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+...|. +|||+|||+++++++|.+++.||++|+++++|.+|+|.+||+.+..++.|.++++++..+...+..
T Consensus 346 y~~~~~~~~~~~~-~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~ 424 (483)
T PRK03640 346 YLNREDATRETFQ-DGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQV 424 (483)
T ss_pred hcCCHHHHHHHHh-cCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCc
Confidence 8999999999985 899999999999999999999999999999999999999999999999999999998888776777
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
.++++.... ..+..++.+.+++.++.+.+|..+++++.+|+|++||++|+.|++++.+
T Consensus 425 ~~~~~~~~~--~~~~~~l~~~~~~~l~~~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 425 PVAFVVKSG--EVTEEELRHFCEEKLAKYKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred eEEEEEeCC--CCCHHHHHHHHHHhccCCCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 777666443 4667889999999999999999999999999999999999999998864
No 74
>PRK08162 acyl-CoA synthetase; Validated
Probab=99.95 E-value=6.1e-27 Score=180.51 Aligned_cols=138 Identities=36% Similarity=0.506 Sum_probs=126.9
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+...|. +|||+|||++++|++|.++++||.|++++++|.+|+|.+||..|.+++.|.++++++.++...++.
T Consensus 402 Y~~~~~~~~~~~~-~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~ 480 (545)
T PRK08162 402 YLKNPKATEEAFA-GGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEV 480 (545)
T ss_pred hcCChhhhHHHhh-CCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEeeeccccCce
Confidence 8999999999995 899999999999999999999999999999999999999999999999999999999988777788
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
+++++.+..+...+..++.+.+++.++.+.+|..+.+ .++|+|++||++|+.|++.+.+
T Consensus 481 ~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gK~~r~~l~~~~~~ 539 (545)
T PRK08162 481 PCAFVELKDGASATEEEIIAHCREHLAGFKVPKAVVF-GELPKTSTGKIQKFVLREQAKS 539 (545)
T ss_pred EEEEEEeCCCCCCCHHHHHHHHHHhcccccCCcEEEe-cccCCCCCcCCcHHHHHHHHhh
Confidence 8888888776666788999999999999999998865 6799999999999999988654
No 75
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=99.95 E-value=4.2e-27 Score=181.67 Aligned_cols=134 Identities=22% Similarity=0.236 Sum_probs=110.5
Q ss_pred CCCChhhhhccc-CCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcce------EEEEeec
Q 038977 1 YLNDPEATAATI-DVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIAD------ATVVPQK 73 (145)
Q Consensus 1 Y~~~~~~t~~~~-~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~------~~~~~~~ 73 (145)
||++|+.+.... +++|||+|||++++|++|.+++.||.+|+||++|.+|+|.+||+.|.++|.|.+ +++++.+
T Consensus 394 Y~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~~~ 473 (539)
T PRK06334 394 YLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQNAADHAGPLVVCGLP 473 (539)
T ss_pred ccCCcccccceeeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCccccccCceEEEcCC
Confidence 899998665332 457899999999999999999999999999999999999999999999999987 6666666
Q ss_pred CCCCCceeEEEEEeCCCCccCHHHHHHHHHhc-cccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 74 DEVAGEVPVAFVVRSNGFELTEEAIKEYIAKQ-VVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 74 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
+.. ..+++++... .+.+++.+.+.++ ++.++.|+.+.++++||+|++||++|+.|++....
T Consensus 474 ~~~--~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 535 (539)
T PRK06334 474 GEK--VRLCLFTTFP----TSISEVNDILKNSKTSSILKISYHHQVESIPMLGTGKPDYCSLNALAKS 535 (539)
T ss_pred CCc--eEEEEEEecc----CChHHHHHHHHhcCCcccccchheeeecccccccCCcccHHHHHHHHHH
Confidence 431 2333444322 3457788888886 78999999999999999999999999999987543
No 76
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.95 E-value=8.6e-27 Score=171.40 Aligned_cols=118 Identities=22% Similarity=0.177 Sum_probs=109.2
Q ss_pred CCCeeecCceEEE-cCCCeEEEEeecCCeEEeCc---EEeChHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCC
Q 038977 14 VEGLLHTGDIGYV-DHDDEVFIVDRVKEIIKFKG---FQVPPAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSN 89 (145)
Q Consensus 14 ~~~~~~TGDl~~~-~~~g~l~~~GR~d~~i~~~G---~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~ 89 (145)
.+|||+|||+|++ |++|++++.||.+ +| .+|+|. ||+.|.++|+|.++++++.++..+++.+++++++..
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~ 280 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAEL 280 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECC
Confidence 4899999999998 7999999999998 88 799999 999999999999999999999999999999998764
Q ss_pred CCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 90 GFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 90 ~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
..+.+++.++++++++. ++|..+.+++++|+|++||++|+.|++.+.+
T Consensus 281 --~~~~~el~~~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~ 328 (365)
T PRK09188 281 --PADEKSLRARLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMN 328 (365)
T ss_pred --CCCHHHHHHHHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhc
Confidence 35678999999999999 9999999999999999999999999987643
No 77
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=6.6e-27 Score=180.86 Aligned_cols=136 Identities=39% Similarity=0.639 Sum_probs=125.0
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+...|..+|||+|||+++++++|.+++.||.+++++++|.+|+|.+||+.+..+++|.++++++.++...++.
T Consensus 420 Y~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~~~~~V~~~~v~~~~~~~~ge~ 499 (557)
T PRK07059 420 YWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVASHPGVLEVAAVGVPDEHSGEA 499 (557)
T ss_pred hhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHHhCCceeEEEEEecccCCCCee
Confidence 89999999998877999999999999999999999999999999999999999999999999999999999888877777
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHH
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAK 137 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~ 137 (145)
+++++.... ...+.+++.+.+.+.++.+..|..+.+++.+|+|++||++|+.|+++
T Consensus 500 ~~~~v~~~~-~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~~P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 500 VKLFVVKKD-PALTEEDVKAFCKERLTNYKRPKFVEFRTELPKTNVGKILRRELRDG 555 (557)
T ss_pred EEEEEEeCC-CCCCHHHHHHHHHHhcccccCCcEEEEeccCCCCcccceeHHHHHhh
Confidence 777777654 34566889999999999999999999999999999999999999865
No 78
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.95 E-value=2.9e-27 Score=181.90 Aligned_cols=133 Identities=23% Similarity=0.356 Sum_probs=111.9
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++|+.+ .+|||+|||+++++ +|.++++||.||+||++|.+|+|.+||+.|.++|.|.++++++.++...++.
T Consensus 386 Y~~~~~~~-----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~~~~~ 459 (525)
T PRK05851 386 YLGQAPID-----PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIERVAAQVRGVREGAVVAVGTGEGSAR 459 (525)
T ss_pred cccCCccC-----CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhCCCcccceEEEEEecCCCCc
Confidence 88888643 47899999999996 7999999999999999999999999999999999999999999887777666
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccc--cCceEEEEec--cCCCCCCCcccHHHHHHHHHc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFY--KRLHKVHFVH--AIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~--~~p~~~~~v~--~~p~t~~gK~~r~~l~~~~~~ 140 (145)
+.+++.... ...+.+++.+.+.++++.+ +.|..+.+++ +||+|++||++|++|++.+++
T Consensus 460 ~~~~v~~~~-~~~~~~~~~~~~~~~l~~~l~~~P~~~~~v~~~~lP~t~~GKi~r~~L~~~~~~ 522 (525)
T PRK05851 460 PGLVIAAEF-RGPDEAGARSEVVQRVASECGVVPSDVVFVAPGSLPRTSSGKLRRLAVKRSLEA 522 (525)
T ss_pred eeEEEEEEe-cCcchHHHHHHHHHHHHHHhCCCccEEEEECCCCcCcCcchHHHHHHHHHHHHh
Confidence 655554331 1234456677777777777 8999999998 899999999999999998865
No 79
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=99.95 E-value=3.9e-27 Score=184.17 Aligned_cols=139 Identities=28% Similarity=0.381 Sum_probs=117.4
Q ss_pred CCCChhhhhcccC------------------CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhc-C
Q 038977 1 YLNDPEATAATID------------------VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLS-H 61 (145)
Q Consensus 1 Y~~~~~~t~~~~~------------------~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~-~ 61 (145)
||++|+.|++.|. +++||+|||+|++ ++|.++++||+||+||++|.+|+|.+||+.+.+ +
T Consensus 443 Y~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~-~dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~ 521 (612)
T PRK12476 443 YWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVY-LDGELYITGRIADLIVIDGRNHYPQDIEATVAEAS 521 (612)
T ss_pred ccCChHHHHHHHhhhhccccccccccccccCCCCeeecccccee-ECCEEEEEeccCcEEEECCcccCHHHHHHHHHHhc
Confidence 9999999999883 2369999999998 599999999999999999999999999999985 7
Q ss_pred CCcce--EEEEeecCCCCCceeEEEEEeCCCC-ccCHHHHHHHHHhccc-cccC-ceEEEEec--cCCCCCCCcccHHHH
Q 038977 62 PSIAD--ATVVPQKDEVAGEVPVAFVVRSNGF-ELTEEAIKEYIAKQVV-FYKR-LHKVHFVH--AIPKSPSGKILRKDL 134 (145)
Q Consensus 62 ~~v~~--~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~l~~~l~~~l~-~~~~-p~~~~~v~--~~p~t~~gK~~r~~l 134 (145)
|.|.+ +++++.++.. ++.+++++++.++. ..+.+++.+.+++.+. .+.+ |..+.+++ .||+|++||++|++|
T Consensus 522 p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L 600 (612)
T PRK12476 522 PMVRRGYVTAFTVPAED-NERLVIVAERAAGTSRADPAPAIDAIRAAVSRRHGLAVADVRLVPAGAIPRTTSGKLARRAC 600 (612)
T ss_pred ccccCCcEEEEEecCCC-cceEEEEEEecCCcccccHHHHHHHHHHHHHHhhCCcceEEEEECCCCcCcCCchHHHHHHH
Confidence 99998 6777777765 67778887776653 2466788888888877 4777 57788886 699999999999999
Q ss_pred HHHHHcc
Q 038977 135 IAKLASS 141 (145)
Q Consensus 135 ~~~~~~~ 141 (145)
++++.++
T Consensus 601 ~~~~~~~ 607 (612)
T PRK12476 601 RAQYLDG 607 (612)
T ss_pred HHHHHcC
Confidence 9998665
No 80
>PLN02479 acetate-CoA ligase
Probab=99.95 E-value=5.3e-27 Score=181.89 Aligned_cols=139 Identities=33% Similarity=0.535 Sum_probs=125.0
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++|+.|.+.|. +|||+|||++++|++|.++++||.+|+|+++|.+|+|.+||..+..++.|.++.+++..+...++.
T Consensus 416 Y~~~~~~t~~~~~-~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~ 494 (567)
T PLN02479 416 YLKNPKANEEAFA-NGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEASVVARPDERWGES 494 (567)
T ss_pred hhcCcccccchhc-CCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccceeeEEeccchhcCce
Confidence 8999999999995 899999999999999999999999999999999999999999999999999999999988877788
Q ss_pred eEEEEEeCCCCc-----cCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 81 PVAFVVRSNGFE-----LTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 81 ~~~~v~~~~~~~-----~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+++++.+..+.. ...+++.+++.++++.++.|..+.+ .++|+|++||++|+.|++.+...
T Consensus 495 ~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gKv~r~~L~~~~~~~ 559 (567)
T PLN02479 495 PCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVF-GPLPKTATGKIQKHVLRAKAKEM 559 (567)
T ss_pred eEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEe-ccCCCCCccCeeHHHHHHHHHhh
Confidence 888888765532 2346788999999999999998776 67999999999999999887653
No 81
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=1.4e-26 Score=177.01 Aligned_cols=140 Identities=39% Similarity=0.684 Sum_probs=130.3
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
|+++++.+...|. ++||+|||+++++++|.+++.||.+++++++|.+++|.+||+.+.++++|.++++++.++...++.
T Consensus 381 y~~~~~~~~~~~~-~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~ 459 (521)
T PRK06187 381 YWNRPEATAETID-GGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGER 459 (521)
T ss_pred hcCCHHHHHHHhh-CCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCce
Confidence 7888888888885 779999999999999999999999999999999999999999999999999999999888777888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+++++....+...+..++.+.+++.++.+..|..+++++++|+|++||++|..++++|.++
T Consensus 460 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~~ 520 (521)
T PRK06187 460 PVAVVVLKPGATLDAKELRAFLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAEG 520 (521)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhcC
Confidence 8888888777667788999999999999999999999999999999999999999999875
No 82
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.95 E-value=6.8e-27 Score=180.16 Aligned_cols=133 Identities=33% Similarity=0.532 Sum_probs=121.7
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++|+.|. +..+|||+|||++++|++|.++++||.+++++++|.+|+|.+||..+.+++.|.++++++.++...++.
T Consensus 404 y~~~~~~~~--~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~g~~ 481 (538)
T TIGR03208 404 YLKRPHLNS--TDAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPAVAQVAIVAYPDERLGER 481 (538)
T ss_pred ccCCccccc--ccCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCcceeeEEEEeccCCCCCce
Confidence 889888765 346899999999999999999999999999999999999999999999999999999999988877888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHh-ccccccCceEEEEeccCCCCCCCcccHHHHH
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAK-QVVFYKRLHKVHFVHAIPKSPSGKILRKDLI 135 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~ 135 (145)
+++++.+..+...+..++.+.+.. +++.+++|..+.+++++|+|++||++|++|+
T Consensus 482 ~~a~v~~~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 482 ACAVVVPKPGCTLDFAAMVAFLKAQKVALQYIPERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred EEEEEEECCCCCCCHHHHHHHHHhcchhhccCCcEEEEeccCCCCCccccchHhhc
Confidence 888888877666777889999985 7999999999999999999999999999986
No 83
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.95 E-value=6.1e-27 Score=191.10 Aligned_cols=122 Identities=20% Similarity=0.137 Sum_probs=112.8
Q ss_pred CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCcc
Q 038977 14 VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFEL 93 (145)
Q Consensus 14 ~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 93 (145)
++|||+|||++++|+||+++|+||+|++||++|.+|+|.+||+.|.++|.|.++++++.++.. ++.+++++++.++...
T Consensus 834 ~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp~V~~aaVvg~~d~~-~~~~~a~Vv~~~~~~~ 912 (994)
T PRK07868 834 ADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIGGVDLAVTYGVEVGG-RQLAVAAVTLRPGAAI 912 (994)
T ss_pred CCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCCCeeEEEEEeecCCC-CceEEEEEEeCCCCcC
Confidence 489999999999999999999999999999999999999999999999999999999998765 5677888888777667
Q ss_pred CHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHH
Q 038977 94 TEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAK 137 (145)
Q Consensus 94 ~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~ 137 (145)
+.+++.+++.+ ++.+++|..++++++||+|++||++|++|++.
T Consensus 913 ~~~~L~~~l~~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~~ 955 (994)
T PRK07868 913 TAADLTEALAS-LPVGLGPDIVHVVPEIPLSATYRPTVSALRAA 955 (994)
T ss_pred CHHHHHHHHHh-CCCCcCCeEEEEeCCCCCCccccEehHHHHhc
Confidence 78899999986 89999999999999999999999999999865
No 84
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=99.95 E-value=1.6e-26 Score=178.24 Aligned_cols=137 Identities=29% Similarity=0.455 Sum_probs=124.9
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++ +...++.+|||+|||+++++++|.+++.||.+|+++++|.+|+|.+||..+.+++.|.++++++.++...++.
T Consensus 398 y~~~---~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~ 474 (542)
T PRK06018 398 YYRV---DGEILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDER 474 (542)
T ss_pred hhcC---cccEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCce
Confidence 5662 2345566899999999999999999999999999999999999999999999999999999999998887888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
..+++.+..+...+.+++.+.++++++.+..|..+.++++||+|++||++|++|++.+.+
T Consensus 475 ~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 534 (542)
T PRK06018 475 PLLIVQLKPGETATREEILKYMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALREQFKD 534 (542)
T ss_pred eEEEEEeCCCCCCCHHHHHHHHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 888888877777777899999999999999999999999999999999999999999876
No 85
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.95 E-value=7.9e-27 Score=179.94 Aligned_cols=130 Identities=34% Similarity=0.591 Sum_probs=118.0
Q ss_pred hhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCceeEEE
Q 038977 5 PEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEVPVAF 84 (145)
Q Consensus 5 ~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~ 84 (145)
++.+.. +. +|||+|||+++++++|++++.||+||+||++|.+|+|.+||+.+.++++|.++++++.++...++.++++
T Consensus 407 ~~~~~~-~~-~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~ 484 (537)
T PRK13382 407 SGSTKD-FH-DGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLAAF 484 (537)
T ss_pred ccchhh-cc-CCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCEEEEE
Confidence 344443 32 7999999999999999999999999999999999999999999999999999999999988788888888
Q ss_pred EEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHH
Q 038977 85 VVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIA 136 (145)
Q Consensus 85 v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~ 136 (145)
+++..+.....+++.+.++..++.+++|..+.+++++|+|++||++|++|++
T Consensus 485 vv~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 485 VVLKPGASATPETLKQHVRDNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred EEECCCCCCCHHHHHHHHHHhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 8887766667789999999999999999999999999999999999998864
No 86
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.95 E-value=1.1e-26 Score=177.61 Aligned_cols=136 Identities=31% Similarity=0.428 Sum_probs=124.0
Q ss_pred CCCChhhhhcccCC-----------CCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEE
Q 038977 1 YLNDPEATAATIDV-----------EGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATV 69 (145)
Q Consensus 1 Y~~~~~~t~~~~~~-----------~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~ 69 (145)
||++++.|...|.. ++||+|||+++++++|.+++.||.+|+++++|.+|+|.+||+.+.+++.|.++.+
T Consensus 368 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v 447 (515)
T TIGR03098 368 YWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVA 447 (515)
T ss_pred ccCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEE
Confidence 89999988777632 3489999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCceeEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHH
Q 038977 70 VPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIA 136 (145)
Q Consensus 70 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~ 136 (145)
++.++...++.++++++.......+..++.+.+.++++.+++|..+++++.||+|.+||++|++|++
T Consensus 448 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 448 FGVPDPTLGQAIVLVVTPPGGEELDRAALLAECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred EeccCcccCceEEEEEEeCCCCCCCHHHHHHHHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 9999888888888888776666667789999999999999999999999999999999999999874
No 87
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.94 E-value=2.5e-26 Score=182.61 Aligned_cols=128 Identities=22% Similarity=0.252 Sum_probs=110.7
Q ss_pred CCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHh-cCCCcceEEEEeecCCCCC-ceeEEEEEeC--CC
Q 038977 15 EGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLL-SHPSIADATVVPQKDEVAG-EVPVAFVVRS--NG 90 (145)
Q Consensus 15 ~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~-~~~~v~~~~~~~~~~~~~~-~~~~~~v~~~--~~ 90 (145)
++||+|||++++|++|.++++||+||+||++|.+|+|.+||+++. .+|.|.++.+++.++...+ +.+++++++. .+
T Consensus 588 ~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~eaaVvg~~d~~~g~e~~~afVvl~~~~g 667 (728)
T PLN03052 588 KILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVLETAAIGVPPPGGGPEQLVIAAVLKDPPG 667 (728)
T ss_pred CEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcceEEEEeeecCCCCcEEEEEEEEEecCCC
Confidence 349999999999999999999999999999999999999999995 7899999999999887665 7888888876 44
Q ss_pred CccCHHHHH----HHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 91 FELTEEAIK----EYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 91 ~~~~~~~l~----~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
...+.++|. +.+++.++++.+|..++++++||+|++||++|+.|++.+.+..
T Consensus 668 ~~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~sGKi~Rr~Lr~~~~~~~ 723 (728)
T PLN03052 668 SNPDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTASNKVMRRVLRQQLAQEL 723 (728)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCchHHHHHHHHHHHHhhh
Confidence 444444444 4566778889999999999999999999999999999887654
No 88
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.94 E-value=3.9e-26 Score=174.06 Aligned_cols=138 Identities=33% Similarity=0.488 Sum_probs=121.0
Q ss_pred CCCChhhhhccc---CCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCC
Q 038977 1 YLNDPEATAATI---DVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVA 77 (145)
Q Consensus 1 Y~~~~~~t~~~~---~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~ 77 (145)
||++++.|...| .+.+||+|||++++ ++|.+++.||.+|+++++|.+|+|.+||+.+..+|.|.++++++.+....
T Consensus 358 y~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~ 436 (503)
T PRK04813 358 YLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNKDHK 436 (503)
T ss_pred cCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCC
Confidence 899999999887 33469999999999 99999999999999999999999999999999999999999998776666
Q ss_pred CceeEEEEEeCCCCcc----CHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHH
Q 038977 78 GEVPVAFVVRSNGFEL----TEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLA 139 (145)
Q Consensus 78 ~~~~~~~v~~~~~~~~----~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~ 139 (145)
++.+++++.+..+... ...++.+.+.+.++.+..|..+++++++|+|++||++|+.|++++.
T Consensus 437 ~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~ 502 (503)
T PRK04813 437 VQYLIAYVVPKEEDFEREFELTKAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVN 502 (503)
T ss_pred ccEEEEEEEeccccccccchhHHHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhc
Confidence 6778887776653211 1246888999999999999999999999999999999999999875
No 89
>PRK12316 peptide synthase; Provisional
Probab=99.94 E-value=6.5e-27 Score=210.78 Aligned_cols=136 Identities=32% Similarity=0.466 Sum_probs=125.6
Q ss_pred CCCChhhhhcccC-------CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeec
Q 038977 1 YLNDPEATAATID-------VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQK 73 (145)
Q Consensus 1 Y~~~~~~t~~~~~-------~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~ 73 (145)
|||+|+.|+++|. +++||+|||++++++||.++++||+|++||++|.+|+|.+||..|.++|+|.++++++.+
T Consensus 2359 Y~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~~~ 2438 (5163)
T PRK12316 2359 YLNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVVAQD 2438 (5163)
T ss_pred ccCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEEEEe
Confidence 9999999999983 346999999999999999999999999999999999999999999999999999999886
Q ss_pred CCCCCceeEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHH
Q 038977 74 DEVAGEVPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAK 137 (145)
Q Consensus 74 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~ 137 (145)
+. .++.++++++...+......++.+.+.+.|+.+++|..+++++.+|+|++||++|++|.+.
T Consensus 2439 ~~-~~~~l~a~v~~~~~~~~~~~~l~~~l~~~Lp~~~vP~~~~~l~~lP~t~~GKidR~~L~~~ 2501 (5163)
T PRK12316 2439 GA-SGKQLVAYVVPDDAAEDLLAELRAWLAARLPAYMVPAHWVVLERLPLNPNGKLDRKALPKP 2501 (5163)
T ss_pred cC-CCeEEEEEEEecCCCccCHHHHHHHHHhhCchhcCcceEeeecccCCCCCCccCHhhcCCC
Confidence 65 6678889988877766778899999999999999999999999999999999999999764
No 90
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.94 E-value=2.1e-26 Score=177.59 Aligned_cols=134 Identities=34% Similarity=0.572 Sum_probs=123.0
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++|+.+.+.|. ++||+|||+++++++|+++++||.|++++++|.+|+|.+||+.+.+++.|.++++++.++...++.
T Consensus 407 y~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~ 485 (541)
T TIGR03205 407 YWNRPEESAEAFV-GDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVIGIPDQYRGEA 485 (541)
T ss_pred ccCChhhhHhhhc-cCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcccCce
Confidence 8999999999986 889999999999999999999999999999999999999999999999999999999988877778
Q ss_pred eEEEEEeCCCCc-cCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHH
Q 038977 81 PVAFVVRSNGFE-LTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLI 135 (145)
Q Consensus 81 ~~~~v~~~~~~~-~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~ 135 (145)
+++++.+..+.. .+..++.+.+++.++.+++|..++++++||+|++||++|++|+
T Consensus 486 ~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 486 AKAFVKLRPGAKPFSLDELRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred EEEEEEECCCCCcCCHHHHHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 888887765532 4678899999999999999999999999999999999998873
No 91
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.94 E-value=2e-26 Score=189.97 Aligned_cols=137 Identities=30% Similarity=0.289 Sum_probs=121.2
Q ss_pred CCCChhhhhcccCC---CCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCC--CcceEEEEeecCC
Q 038977 1 YLNDPEATAATIDV---EGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHP--SIADATVVPQKDE 75 (145)
Q Consensus 1 Y~~~~~~t~~~~~~---~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~--~v~~~~~~~~~~~ 75 (145)
||++|+.|++.|.. +|||+|||++++|+||.+++.||.||++|++|.+|+|.+||+.+.+++ .+.++++++.++.
T Consensus 1001 Y~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~~ 1080 (1146)
T PRK08633 1001 YLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEVVFAVTAVPDE 1080 (1146)
T ss_pred ccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCceEEEEeccCC
Confidence 89999999998852 399999999999999999999999999999999999999999999998 4567888998888
Q ss_pred CCCceeEEEEEeCCCCccCHHHHHHHHHh-ccccccCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 76 VAGEVPVAFVVRSNGFELTEEAIKEYIAK-QVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 76 ~~~~~~~~~v~~~~~~~~~~~~l~~~l~~-~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
..++.++++++.. ..+.+++.+.+.+ .++.+++|..+++++++|+|++||++|++|++...+
T Consensus 1081 ~~g~~~~~~v~~~---~~~~~~l~~~~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~~~ 1143 (1146)
T PRK08633 1081 KKGEKLVVLHTCG---AEDVEELKRAIKESGLPNLWKPSRYFKVEALPLLGSGKLDLKGLKELALA 1143 (1146)
T ss_pred CCCcEEEEEEecC---ccCHHHHHHHHHhcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHH
Confidence 8888888877652 3456788888875 699999999999999999999999999999987654
No 92
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.94 E-value=4.6e-26 Score=188.13 Aligned_cols=139 Identities=20% Similarity=0.168 Sum_probs=119.0
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||+++..+......+|||+|||++++|+||.+++.||.||+||++|.+|+|.+||+.+.+++.+.++++++.++...++.
T Consensus 995 Y~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~~ 1074 (1140)
T PRK06814 995 YLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSIPDARKGER 1074 (1140)
T ss_pred hcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcccCCCCce
Confidence 77776533222235899999999999999999999999999999999999999999999999999999999988877777
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhc-cccccCceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQ-VVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
+++++. ....+.+++.+++.+. ++.+++|..+.+++++|+|++||++|++|+++..+..
T Consensus 1075 ~~~~~~---~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 1134 (1140)
T PRK06814 1075 IILLTT---ASDATRAAFLAHAKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEEAA 1134 (1140)
T ss_pred EEEEEc---CCCcCHHHHHHHHHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHhh
Confidence 666543 2335667888888864 9999999999999999999999999999999887654
No 93
>PRK12316 peptide synthase; Provisional
Probab=99.94 E-value=1.7e-26 Score=208.19 Aligned_cols=134 Identities=29% Similarity=0.378 Sum_probs=123.2
Q ss_pred CCCChhhhhcccC------CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecC
Q 038977 1 YLNDPEATAATID------VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKD 74 (145)
Q Consensus 1 Y~~~~~~t~~~~~------~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~ 74 (145)
|||+|+.|++.|. +++||+|||++++++||.++++||+|++||++|.+|+|.+||+.|.++|.|.++++++.+
T Consensus 865 Yl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~~~~- 943 (5163)
T PRK12316 865 YHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVLAVD- 943 (5163)
T ss_pred hCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEEEcC-
Confidence 8999999999883 456999999999999999999999999999999999999999999999999999999886
Q ss_pred CCCCceeEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHH
Q 038977 75 EVAGEVPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKL 138 (145)
Q Consensus 75 ~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~ 138 (145)
++.+++++++..+......++.++++++|+.+++|..+++++.+|+|++||++|++|.+..
T Consensus 944 ---~~~lva~vv~~~~~~~~~~~l~~~l~~~Lp~y~vP~~i~~v~~lP~t~~GKidr~~L~~~~ 1004 (5163)
T PRK12316 944 ---GKQLVGYVVLESEGGDWREALKAHLAASLPEYMVPAQWLALERLPLTPNGKLDRKALPAPE 1004 (5163)
T ss_pred ---CCeEEEEEEccCCCCCCHHHHHHHHHhhCCCccCCCeEEEHhhCCCCCCCChhHHhhcCcc
Confidence 4688888888776556778999999999999999999999999999999999999997653
No 94
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.94 E-value=8.2e-26 Score=174.89 Aligned_cols=139 Identities=38% Similarity=0.574 Sum_probs=125.6
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+...| .+|||+|||+++++++|.++++||.+|+++++|.+++|.+||+.+.+++.|.++++++.++...++.
T Consensus 418 y~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~g~~ 496 (560)
T PRK08974 418 YWQRPEATDEVI-KDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPKVLEVAAVGVPSEVSGEA 496 (560)
T ss_pred hcCChhhhhhhh-hcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCeeEEEEEeeecCCcceE
Confidence 889999999888 4899999999999999999999999999999999999999999999999999999999988877777
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+++++.... ...+.+++.+++.+.++.++.|..+.+++++|+|++||++|+.|++...+.
T Consensus 497 ~~~~v~~~~-~~~~~~~l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 556 (560)
T PRK08974 497 VKIFVVKKD-PSLTEEELITHCRRHLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARAK 556 (560)
T ss_pred EEEEEECCC-CCCCHHHHHHHHHhhcccccCCcEEEEhhhCCCCCCCcEeHHHHHHHHHhh
Confidence 777766543 334567899999999999999999999999999999999999999987654
No 95
>PRK12467 peptide synthase; Provisional
Probab=99.94 E-value=1.1e-26 Score=206.91 Aligned_cols=137 Identities=29% Similarity=0.442 Sum_probs=123.9
Q ss_pred CCCChhhhhcccCCC-------CeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeec
Q 038977 1 YLNDPEATAATIDVE-------GLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQK 73 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~-------~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~ 73 (145)
|||+|+.|+++|..+ +||+|||+|++++||.++++||+|++||++|.+|+|.+||+.|.++|+|.+++++...
T Consensus 3449 Y~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~~~~ 3528 (3956)
T PRK12467 3449 YHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVVLARD 3528 (3956)
T ss_pred ccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccceEEEEEec
Confidence 999999999999543 4799999999999999999999999999999999999999999999999999998874
Q ss_pred CCCCCceeEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHH
Q 038977 74 DEVAGEVPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKL 138 (145)
Q Consensus 74 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~ 138 (145)
. ..++.++++++.........+++.+.++++|+.+++|..+++++.+|+|++||++|++|.+..
T Consensus 3529 ~-~~~~~lva~v~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~~~~ 3592 (3956)
T PRK12467 3529 G-AGGKQLVAYVVPADPQGDWRETLRDHLAASLPDYMVPAQLLVLAAMPLGPNGKVDRKALPDPD 3592 (3956)
T ss_pred C-CCCcEEEEEEeCCCCCcccHHHHHHHHhccCChhhCCCeeeeeccCCCCCCCccchhhcCCCC
Confidence 3 456788888887765556678999999999999999999999999999999999999998654
No 96
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.94 E-value=5.2e-26 Score=189.50 Aligned_cols=136 Identities=23% Similarity=0.327 Sum_probs=118.8
Q ss_pred CCCChhhhhcccC------CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeec-
Q 038977 1 YLNDPEATAATID------VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQK- 73 (145)
Q Consensus 1 Y~~~~~~t~~~~~------~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~- 73 (145)
||++|+.|++.|. +++||+|||+++++++|.++++||.|++||++|.+|+|.+||..|.++|.|.+++++...
T Consensus 816 Y~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~v~~~~~ 895 (1296)
T PRK10252 816 YLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAVTHACVI 895 (1296)
T ss_pred hCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceEEEEEec
Confidence 8999999999984 345999999999999999999999999999999999999999999999999999776542
Q ss_pred ---CCCCC--ceeEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHH
Q 038977 74 ---DEVAG--EVPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIA 136 (145)
Q Consensus 74 ---~~~~~--~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~ 136 (145)
+...+ ..++++++...+...+..++.+.++++++.+++|..++.++.+|+|++||++|++|.+
T Consensus 896 ~~~~~~~~~~~~lva~v~~~~~~~~~~~~l~~~l~~~Lp~~~~P~~~~~~~~lP~t~~GKidr~~L~~ 963 (1296)
T PRK10252 896 NQAAATGGDARQLVGYLVSQSGLPLDTSALQAQLRERLPPHMVPVVLLQLDQLPLSANGKLDRKALPL 963 (1296)
T ss_pred cccccCCCCccEEEEEEEcCCCCCCCHHHHHHHHHhhCchhcCCcEEEEecCCCCCCCcChhHHhcCC
Confidence 11112 3677888776665567789999999999999999999999999999999999999865
No 97
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.94 E-value=6.5e-26 Score=170.28 Aligned_cols=131 Identities=34% Similarity=0.591 Sum_probs=118.4
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+...+ .+|||+|||+++++++|.+++.||.+|+++++|.+|++.+||+.+.+++.|.+++++..++...+..
T Consensus 306 y~~~~~~~~~~~-~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~ 384 (436)
T TIGR01923 306 YLYQGELTPAFE-QQGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQV 384 (436)
T ss_pred hCCChhhhhhhh-cCCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCCe
Confidence 888888887766 4899999999999999999999999999999999999999999999999999999998887766777
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHH
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDL 134 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l 134 (145)
+.+++.+..+ .+..++.+++.+.++.+++|..++++++||+|++||++|++|
T Consensus 385 ~~~~v~~~~~--~~~~~l~~~l~~~l~~~~~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 385 PVAYIVSESD--ISQAKLIAYLTEKLAKYKVPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred eEEEEEECCC--CCHHHHHHHHHHhhhCCCCCeEEEEecCCCCCCCCceecccC
Confidence 7777776653 567889999999999999999999999999999999999764
No 98
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.93 E-value=2.2e-25 Score=173.26 Aligned_cols=139 Identities=27% Similarity=0.413 Sum_probs=119.1
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcc--eEEEEeecCCCCC
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIA--DATVVPQKDEVAG 78 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~--~~~~~~~~~~~~~ 78 (145)
||++ ..+.+.+..+|||+|||++++ ++|.++++||.||+|+++|.+|+|.+||+.|.++|.|. ++++++.++.. +
T Consensus 425 Y~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~-~ 501 (579)
T PRK09192 425 YFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQEN-G 501 (579)
T ss_pred hcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHHHHHHHhcCCccCCcEEEEEeccCC-C
Confidence 8888 667777777999999999999 99999999999999999999999999999999999998 78888888765 4
Q ss_pred ceeEEEEEeCCCCccCHHHHHHHHHhccc-cccCceEEEEec--cCCCCCCCcccHHHHHHHHHccC
Q 038977 79 EVPVAFVVRSNGFELTEEAIKEYIAKQVV-FYKRLHKVHFVH--AIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 79 ~~~~~~v~~~~~~~~~~~~l~~~l~~~l~-~~~~p~~~~~v~--~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
+.+++++........+.+++.+.+++.+. .+..|..+.++. .||+|++||++|++|++.+..+.
T Consensus 502 ~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~i~~~~~~~lP~t~~GKv~R~~l~~~~~~~~ 568 (579)
T PRK09192 502 EKIVLLVQCRISDEERRGQLIHALAALVRSEFGVEAAVELVPPHSLPRTSSGKLSRAKAKKRYLSGA 568 (579)
T ss_pred eeEEEEEEecCCChHHHHHHHHHHHHHHHHHhCCCceEEEeCCCCcCCCCCcchhHHHHHHHHHcCC
Confidence 46666766655444566788999988875 678888777775 89999999999999999988765
No 99
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.93 E-value=2.1e-25 Score=170.73 Aligned_cols=135 Identities=31% Similarity=0.447 Sum_probs=121.7
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+...|. ++||+|||+++++++|.+++.||.+|+++++|.+|+|.+||+.+.++++|.++++++..+....+.
T Consensus 370 Y~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 448 (508)
T TIGR02262 370 YWNNRAKTRDTFQ-GEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIK 448 (508)
T ss_pred cCCCHHHhHhhhh-cCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCce
Confidence 8999999999985 899999999999999999999999999999999999999999999999999999999877666677
Q ss_pred eEEEEEeCCCCc---cCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHH
Q 038977 81 PVAFVVRSNGFE---LTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIA 136 (145)
Q Consensus 81 ~~~~v~~~~~~~---~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~ 136 (145)
+.+++....+.. ....++.+.++++++.++.|..+.+++++|+|++||++|++|++
T Consensus 449 ~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~ 507 (508)
T TIGR02262 449 PKAFIVLRPGQDIDTALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATGKIQRFKLRE 507 (508)
T ss_pred eEEEEEeCCCCccccccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCCcEehhhccC
Confidence 777777665442 33578899999999999999999999999999999999999875
No 100
>PRK12467 peptide synthase; Provisional
Probab=99.93 E-value=6.2e-26 Score=202.12 Aligned_cols=137 Identities=28% Similarity=0.402 Sum_probs=120.8
Q ss_pred CCCChhhhhcccC-------CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeec
Q 038977 1 YLNDPEATAATID-------VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQK 73 (145)
Q Consensus 1 Y~~~~~~t~~~~~-------~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~ 73 (145)
|||+|+.|+++|. +.+||+|||++++++||.++++||+|++||++|.+|+|.+||..|.++|.|.++++++.+
T Consensus 1932 Yl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~rIel~eIE~~l~~~p~V~~a~vv~~~ 2011 (3956)
T PRK12467 1932 YLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLREQGGVREAVVIAQD 2011 (3956)
T ss_pred ccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceEEeCeEEechHHHHHHHHhCCCcceEEEEEec
Confidence 9999999999983 346999999999999999999999999999999999999999999999999999999886
Q ss_pred CCCCCceeEEEEEeCCCCcc--------CHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHH
Q 038977 74 DEVAGEVPVAFVVRSNGFEL--------TEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKL 138 (145)
Q Consensus 74 ~~~~~~~~~~~v~~~~~~~~--------~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~ 138 (145)
...+..++++++....... ...++.+.+++.|+.+++|..+++++.+|+|++||++|++|.+..
T Consensus 2012 -~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~l~~lP~t~~GKidr~~L~~~~ 2083 (3956)
T PRK12467 2012 -GANGKQLVAYVVPTDPGLVDDDEAQVALRAILKNHLKASLPEYMVPAHLVFLARMPLTPNGKLDRKALPAPD 2083 (3956)
T ss_pred -CCCCcEEEEEEEecCcccccccccccccHHHHHHHHHhhCchhhCchhhhhhhcCCCCCCCCcchhhCCCCc
Confidence 4455678888876543221 346799999999999999999999999999999999999987643
No 101
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.93 E-value=1.9e-25 Score=176.08 Aligned_cols=138 Identities=25% Similarity=0.291 Sum_probs=113.7
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEe-CcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCc
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKF-KGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGE 79 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~-~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~ 79 (145)
||++|+.|+++|. +|||+|||+|++|++|.++++||+||+||+ +|++|+|.+||+.+.++|.|.++++++.+. ++
T Consensus 479 Y~~~pe~T~~~f~-dGw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~~---~~ 554 (660)
T PLN02861 479 YHKRQDLTEEVLI-DGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNSF---ES 554 (660)
T ss_pred ccCCHHHHHhhhh-ccCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecCC---cc
Confidence 9999999999995 899999999999999999999999999997 799999999999999999999999998763 34
Q ss_pred eeEEEEEeCCCC----------ccCH----------HHHHHHHHh-----ccccccCceEEEEec-cC-----CCCCCCc
Q 038977 80 VPVAFVVRSNGF----------ELTE----------EAIKEYIAK-----QVVFYKRLHKVHFVH-AI-----PKSPSGK 128 (145)
Q Consensus 80 ~~~~~v~~~~~~----------~~~~----------~~l~~~l~~-----~l~~~~~p~~~~~v~-~~-----p~t~~gK 128 (145)
.+++++++.... ..+. ..+.+.+++ .++.+..++.+.+.+ .+ ++|+++|
T Consensus 555 ~~~A~vv~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K 634 (660)
T PLN02861 555 FLVAVVVPDRQALEDWAANNNKTGDFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFK 634 (660)
T ss_pred eeEEEEEcCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHh
Confidence 677777764320 0011 123344433 488899999888864 45 7999999
Q ss_pred ccHHHHHHHHHccC
Q 038977 129 ILRKDLIAKLASSM 142 (145)
Q Consensus 129 ~~r~~l~~~~~~~~ 142 (145)
++|..+.+.|.+.|
T Consensus 635 ~~R~~i~~~y~~~I 648 (660)
T PLN02861 635 LKRPQLLKYYKDCI 648 (660)
T ss_pred hhHHHHHHHHHHHH
Confidence 99999999998765
No 102
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.93 E-value=5.6e-25 Score=168.80 Aligned_cols=122 Identities=35% Similarity=0.646 Sum_probs=113.6
Q ss_pred CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCcc
Q 038977 14 VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFEL 93 (145)
Q Consensus 14 ~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 93 (145)
.+|||+|||++++|++|++++.||.+++|+++|.+|+|.+||..|.+++.|.++++++.++...++.+.+++.+......
T Consensus 394 ~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~~~ 473 (516)
T PRK13383 394 VDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVIGVPDERFGHRLAAFVVLHPGSGV 473 (516)
T ss_pred ecCceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCC
Confidence 37999999999999999999999999999999999999999999999999999999999888888888888888766666
Q ss_pred CHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHH
Q 038977 94 TEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLI 135 (145)
Q Consensus 94 ~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~ 135 (145)
+..++.+.+.++++.+..|..+.++++||+|++||++|++|+
T Consensus 474 ~~~~l~~~~~~~l~~~~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 474 DAAQLRDYLKDRVSRFEQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred CHHHHHHHHHHhcccCCCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 778999999999999999999999999999999999999874
No 103
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.93 E-value=1.8e-25 Score=176.34 Aligned_cols=138 Identities=23% Similarity=0.274 Sum_probs=113.5
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEe-CcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCc
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKF-KGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGE 79 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~-~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~ 79 (145)
||++|+.|+++|. +|||+|||+|++|++|.|+|+||++|+||+ +|++|+|.+||+.+.++|.|.++++++.... .
T Consensus 482 Y~~~pe~T~~~f~-dGw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~---~ 557 (666)
T PLN02614 482 YYKREDLTKEVLI-DGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFE---S 557 (666)
T ss_pred ccCCHHHhhhhhc-cCCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCc---c
Confidence 9999999999995 899999999999999999999999999997 7999999999999999999999999998632 2
Q ss_pred eeEEEEEeCCCC----------ccC----------HHHHHHHH-----HhccccccCceEEEEecc------CCCCCCCc
Q 038977 80 VPVAFVVRSNGF----------ELT----------EEAIKEYI-----AKQVVFYKRLHKVHFVHA------IPKSPSGK 128 (145)
Q Consensus 80 ~~~~~v~~~~~~----------~~~----------~~~l~~~l-----~~~l~~~~~p~~~~~v~~------~p~t~~gK 128 (145)
.+++++++.... ..+ .+.+.+.+ ++.|+.+.+++.+.++++ -.+|+++|
T Consensus 558 ~l~alvv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K 637 (666)
T PLN02614 558 FLVAIANPNQQILERWAAENGVSGDYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFK 637 (666)
T ss_pred eEEEEEeCCHHHHHHHHHhcCCCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhh
Confidence 577777765321 001 11222322 356999999999998853 35899999
Q ss_pred ccHHHHHHHHHccC
Q 038977 129 ILRKDLIAKLASSM 142 (145)
Q Consensus 129 ~~r~~l~~~~~~~~ 142 (145)
++|..+.+.|.+.|
T Consensus 638 ~kR~~i~~~y~~~i 651 (666)
T PLN02614 638 KKRPQLLKYYQSVI 651 (666)
T ss_pred hhHHHHHHHHHHHH
Confidence 99999999998765
No 104
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.93 E-value=5.5e-25 Score=170.86 Aligned_cols=139 Identities=25% Similarity=0.390 Sum_probs=111.0
Q ss_pred CCCChhhhhcccC-----------CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEE
Q 038977 1 YLNDPEATAATID-----------VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATV 69 (145)
Q Consensus 1 Y~~~~~~t~~~~~-----------~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~ 69 (145)
||++|+.|++.|. .+|||+|||+++++ +|+++++||++|+|+++|.+|+|.+||+.+.+++.+. +.+
T Consensus 411 Y~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~~~-~~v 488 (578)
T PRK05850 411 YWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKDLLIVDGRNHYPDDIEATIQEITGGR-VAA 488 (578)
T ss_pred ccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEcccccEEEECCeecCHHHHHHHHHHhcCCc-EEE
Confidence 8999999999984 25799999999997 8999999999999999999999999999999998854 667
Q ss_pred EeecCCCCCceeEEEEEeCCCCccCH------HHHHHHHHhccccc--cCceEEEEe--ccCCCCCCCcccHHHHHHHHH
Q 038977 70 VPQKDEVAGEVPVAFVVRSNGFELTE------EAIKEYIAKQVVFY--KRLHKVHFV--HAIPKSPSGKILRKDLIAKLA 139 (145)
Q Consensus 70 ~~~~~~~~~~~~~~~v~~~~~~~~~~------~~l~~~l~~~l~~~--~~p~~~~~v--~~~p~t~~gK~~r~~l~~~~~ 139 (145)
++.++. .++.+++++.+..+...+. ..+.+.+.+.+... ..|..+.++ +.||+|++||++|++|++.+.
T Consensus 489 ~~v~~~-~~~~~~a~v~~~~~~~~~~~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~ 567 (578)
T PRK05850 489 ISVPDD-GTEKLVAIIELKKRGDSDEEAMDRLRTVKREVTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYR 567 (578)
T ss_pred EEecCC-CceEEEEEEEeccccCcchhhhhhHHHHHHHHHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHH
Confidence 777765 6678888888776543322 34555555544432 346666666 489999999999999999987
Q ss_pred ccC
Q 038977 140 SSM 142 (145)
Q Consensus 140 ~~~ 142 (145)
+..
T Consensus 568 ~~~ 570 (578)
T PRK05850 568 QDE 570 (578)
T ss_pred cCC
Confidence 653
No 105
>PRK05691 peptide synthase; Validated
Probab=99.93 E-value=3.1e-25 Score=198.70 Aligned_cols=136 Identities=30% Similarity=0.453 Sum_probs=122.1
Q ss_pred CCCChhhhhcccC-------CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeec
Q 038977 1 YLNDPEATAATID-------VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQK 73 (145)
Q Consensus 1 Y~~~~~~t~~~~~-------~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~ 73 (145)
|||+|+.|.+.|. +.+||+|||+++++++|.++++||+|++||++|.+|+|.+||..|.++|.|.+++++...
T Consensus 1483 Yl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~~V~~a~v~~~~ 1562 (4334)
T PRK05691 1483 YLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQPGVAQAAVLVRE 1562 (4334)
T ss_pred hcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCCCcceEEEEEee
Confidence 8999999999983 235999999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCceeEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHH
Q 038977 74 DEVAGEVPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAK 137 (145)
Q Consensus 74 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~ 137 (145)
.. .+..+++++....+......++.+.+.+.++.+++|..++.++.+|+|++||++|++|.+.
T Consensus 1563 ~~-~~~~lva~~~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~~~~lP~t~~GKidr~~L~~~ 1625 (4334)
T PRK05691 1563 GA-AGAQLVGYYTGEAGQEAEAERLKAALAAELPEYMVPAQLIRLDQMPLGPSGKLDRRALPEP 1625 (4334)
T ss_pred CC-CCCEEEEEEEeCCCCCCCHHHHHHHHHHhCccccCCcEEEEccccCCCCCCCcChhhcCcc
Confidence 54 4467788887776666677899999999999999999999999999999999999998653
No 106
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.93 E-value=1.2e-24 Score=163.14 Aligned_cols=119 Identities=30% Similarity=0.514 Sum_probs=109.2
Q ss_pred CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCcc
Q 038977 14 VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFEL 93 (145)
Q Consensus 14 ~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 93 (145)
.++||+|||++++|++|.++++||.|+++|++|.+|+|.+||+.+.++++|.++++++.++...++.+.+++.... ..
T Consensus 289 ~~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~v~~~~--~~ 366 (414)
T PRK08308 289 GDKEIFTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGERVKAKVISHE--EI 366 (414)
T ss_pred CCceEECCceEEECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCceEEEEEEeCC--CC
Confidence 3689999999999999999999999999999999999999999999999999999999988887888877776654 45
Q ss_pred CHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHH
Q 038977 94 TEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDL 134 (145)
Q Consensus 94 ~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l 134 (145)
+..++.++++++++.+++|..+++++.+|+|++||++|+.|
T Consensus 367 ~~~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~ 407 (414)
T PRK08308 367 DPVQLREWCIQHLAPYQVPHEIESVTEIPKNANGKVSRKLL 407 (414)
T ss_pred CHHHHHHHHHHhCccccCCcEEEEeccCCCCCCcCeehhhh
Confidence 67889999999999999999999999999999999999944
No 107
>PRK05691 peptide synthase; Validated
Probab=99.93 E-value=2.7e-25 Score=199.11 Aligned_cols=136 Identities=28% Similarity=0.371 Sum_probs=118.8
Q ss_pred CCCChhhhhcccC-------CCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeec
Q 038977 1 YLNDPEATAATID-------VEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQK 73 (145)
Q Consensus 1 Y~~~~~~t~~~~~-------~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~ 73 (145)
|||+|+.|+++|. +.+||+|||++++++||.++++||.|++||++|.+|++.+||..+.++|+|.+++++...
T Consensus 4080 Y~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~~v~~a~v~~~~ 4159 (4334)
T PRK05691 4080 YVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEVREAAVAVQE 4159 (4334)
T ss_pred ccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCCCccEEEEEEec
Confidence 9999999999993 457999999999999999999999999999999999999999999999999998876554
Q ss_pred CCCCCceeEEEEEeCCCCcc---CHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHH
Q 038977 74 DEVAGEVPVAFVVRSNGFEL---TEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAK 137 (145)
Q Consensus 74 ~~~~~~~~~~~v~~~~~~~~---~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~ 137 (145)
...++.+++++........ ...++...+++.||.|++|..++.++.+|+|++||++|++|.+.
T Consensus 4160 -~~~~~~l~a~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4160 -GVNGKHLVGYLVPHQTVLAQGALLERIKQRLRAELPDYMVPLHWLWLDRLPLNANGKLDRKALPAL 4225 (4334)
T ss_pred -CCCCcEEEEEEeCCcccccchHHHHHHHHHHHhhCChhhcCcceeecccCCCCCCCcccHhhcCCC
Confidence 3455677888776554322 23678889999999999999999999999999999999999764
No 108
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.91 E-value=1.1e-24 Score=170.56 Aligned_cols=138 Identities=21% Similarity=0.319 Sum_probs=113.6
Q ss_pred CCCChhhhhcccCCCCeeecCceEEE----cCCCeEEEEeecCCeEEe-CcEEeC--hHHHHHHHhcCCCcceEEEEeec
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYV----DHDDEVFIVDRVKEIIKF-KGFQVP--PAEIEALLLSHPSIADATVVPQK 73 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~----~~~g~l~~~GR~d~~i~~-~G~~v~--~~~ie~~l~~~~~v~~~~~~~~~ 73 (145)
||++|+.|.+.|..+|||+|||+|++ |++|+++++||++|++++ +|++|+ |.++|..+..+|.|.++++++.+
T Consensus 425 Y~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~ 504 (614)
T PRK08180 425 YWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQDVVITGHD 504 (614)
T ss_pred hcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhheEEEEcCC
Confidence 99999999999987999999999999 468999999999998886 798777 67888888899999999999987
Q ss_pred CCCCCceeEEEEEeCCCC---------------ccCHHHHHHHHHhcccccc--------CceEEEEeccCCCC------
Q 038977 74 DEVAGEVPVAFVVRSNGF---------------ELTEEAIKEYIAKQVVFYK--------RLHKVHFVHAIPKS------ 124 (145)
Q Consensus 74 ~~~~~~~~~~~v~~~~~~---------------~~~~~~l~~~l~~~l~~~~--------~p~~~~~v~~~p~t------ 124 (145)
+. .+.++|++..+. ..+.+++.+++...+..++ +|+++.+++++|++
T Consensus 505 ~~----~~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~p~~~~gk~t 580 (614)
T PRK08180 505 RD----EIGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRERLARLNAQATGSSTRVARALLLDEPPSLDAGEIT 580 (614)
T ss_pred CC----ceEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHHHHHHHHhhccccHhheeEEEEecCCCCCccCccC
Confidence 75 556676665431 1234567888877777776 89999999988875
Q ss_pred CCCcccHHHHHHHHHccC
Q 038977 125 PSGKILRKDLIAKLASSM 142 (145)
Q Consensus 125 ~~gK~~r~~l~~~~~~~~ 142 (145)
++||+.|.++.+.|++.|
T Consensus 581 ~~~~~~R~~~~~~y~~~i 598 (614)
T PRK08180 581 DKGYINQRAVLARRAALV 598 (614)
T ss_pred ccccccHHHHHHHhHHHH
Confidence 566889999999988765
No 109
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.91 E-value=3.3e-24 Score=169.94 Aligned_cols=139 Identities=24% Similarity=0.333 Sum_probs=111.9
Q ss_pred CCCChhhhhccc--CCCC--eeecCceEEEcCCCeEEEEeecCCeEEe-CcEEeChHHHHHHHhcCCCcceEEEEeecCC
Q 038977 1 YLNDPEATAATI--DVEG--LLHTGDIGYVDHDDEVFIVDRVKEIIKF-KGFQVPPAEIEALLLSHPSIADATVVPQKDE 75 (145)
Q Consensus 1 Y~~~~~~t~~~~--~~~~--~~~TGDl~~~~~~g~l~~~GR~d~~i~~-~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~ 75 (145)
||++|+.|+++| +.+| ||+|||+|++|++|+++++||++|+||+ +|++|+|.+||+.|.++|.|.++++++.+..
T Consensus 516 Y~~~pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~~ 595 (696)
T PLN02387 516 YFKNQEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPFH 595 (696)
T ss_pred hcCCHHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCCc
Confidence 999999999998 3345 9999999999999999999999999998 6999999999999999999999999987633
Q ss_pred CCCceeEEEEEeCCCC----------c-cC----------HHHHHHHH-----HhccccccCceEEEEecc------CCC
Q 038977 76 VAGEVPVAFVVRSNGF----------E-LT----------EEAIKEYI-----AKQVVFYKRLHKVHFVHA------IPK 123 (145)
Q Consensus 76 ~~~~~~~~~v~~~~~~----------~-~~----------~~~l~~~l-----~~~l~~~~~p~~~~~v~~------~p~ 123 (145)
..+++++++.... . .+ .+++.+.+ +..|..+.+|+.+.++++ -.+
T Consensus 596 ---~~~~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~l 672 (696)
T PLN02387 596 ---SYCVALVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLV 672 (696)
T ss_pred ---ceEEEEEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcC
Confidence 3567777664321 0 00 11222222 336999999999999854 247
Q ss_pred CCCCcccHHHHHHHHHccC
Q 038977 124 SPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 124 t~~gK~~r~~l~~~~~~~~ 142 (145)
|++.|++|..+++.|.+.|
T Consensus 673 T~t~K~~R~~i~~~y~~~i 691 (696)
T PLN02387 673 TAALKLKREQIRKKFKDDL 691 (696)
T ss_pred ChhhhhhhHHHHHHHHHHH
Confidence 9999999999999998865
No 110
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.91 E-value=6.9e-24 Score=167.28 Aligned_cols=138 Identities=24% Similarity=0.306 Sum_probs=112.1
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEe-CcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCc
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKF-KGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGE 79 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~-~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~ 79 (145)
||++|+.|+++|. +|||+|||+|++|++|.+++.||++|+||+ +|++|+|.+||+.+.++|.|.++++++.. .+.
T Consensus 479 Y~~~~e~t~~~~~-dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~---~~~ 554 (660)
T PLN02430 479 YYKNPELTEEVMK-DGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDS---FKS 554 (660)
T ss_pred ccCChHHhhhhhh-ccceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecC---Ccc
Confidence 9999999999995 999999999999999999999999999997 79999999999999999999999999843 235
Q ss_pred eeEEEEEeCCCC----------ccC----------HHHHHHHH-----HhccccccCceEEEEecc------CCCCCCCc
Q 038977 80 VPVAFVVRSNGF----------ELT----------EEAIKEYI-----AKQVVFYKRLHKVHFVHA------IPKSPSGK 128 (145)
Q Consensus 80 ~~~~~v~~~~~~----------~~~----------~~~l~~~l-----~~~l~~~~~p~~~~~v~~------~p~t~~gK 128 (145)
.+++++++.... ..+ .+.+.+.+ ++.|+.+.+++.+++.++ -.+|+++|
T Consensus 555 ~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K 634 (660)
T PLN02430 555 MLVAVVVPNEENTNKWAKDNGFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLK 634 (660)
T ss_pred eEEEEEEcCHHHHHHHHHhCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhh
Confidence 777777765321 000 01122222 235999999999998743 35899999
Q ss_pred ccHHHHHHHHHccC
Q 038977 129 ILRKDLIAKLASSM 142 (145)
Q Consensus 129 ~~r~~l~~~~~~~~ 142 (145)
++|..+.+.|.+.|
T Consensus 635 ~~R~~i~~~y~~~i 648 (660)
T PLN02430 635 KRRNNLLKYYQVEI 648 (660)
T ss_pred hhhHHHHHHHHHHH
Confidence 99999999988765
No 111
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=99.90 E-value=1.9e-23 Score=165.66 Aligned_cols=139 Identities=21% Similarity=0.283 Sum_probs=108.7
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEE-eCcEEeChHHHHHHHhcCCCcce--EEEEeecCCCC
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIK-FKGFQVPPAEIEALLLSHPSIAD--ATVVPQKDEVA 77 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~-~~G~~v~~~~ie~~l~~~~~v~~--~~~~~~~~~~~ 77 (145)
||++|+.|+++|..+|||+|||+|++|++|.++++||+||+|| ++|++|+|.+||+.+.++|.|.+ ++++..+..
T Consensus 521 Y~~~pe~T~~~f~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~~-- 598 (700)
T PTZ00216 521 YYKQEELTREVLDEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPAR-- 598 (700)
T ss_pred hcCChhHhhhhccccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecCC--
Confidence 9999999999998899999999999999999999999999999 79999999999999999999986 344433322
Q ss_pred CceeEEEEEeCCCC----------ccC----------HHHHHHHH-----HhccccccCceEEEEec------cCCCCCC
Q 038977 78 GEVPVAFVVRSNGF----------ELT----------EEAIKEYI-----AKQVVFYKRLHKVHFVH------AIPKSPS 126 (145)
Q Consensus 78 ~~~~~~~v~~~~~~----------~~~----------~~~l~~~l-----~~~l~~~~~p~~~~~v~------~~p~t~~ 126 (145)
..+++++++.... ..+ .+.+.+.+ +..+..+..++.++++. .-.+|++
T Consensus 599 -~~l~a~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~t 677 (700)
T PTZ00216 599 -SYICALVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLTAA 677 (700)
T ss_pred -ceEEEEEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCChh
Confidence 4667777654211 000 01222222 23577888999888883 3457999
Q ss_pred CcccHHHHHHHHHccC
Q 038977 127 GKILRKDLIAKLASSM 142 (145)
Q Consensus 127 gK~~r~~l~~~~~~~~ 142 (145)
+|++|+.+.+.|.+.|
T Consensus 678 ~K~~R~~i~~~y~~~i 693 (700)
T PTZ00216 678 MKLKRRVIDERYADLI 693 (700)
T ss_pred hccchHHHHHHHHHHH
Confidence 9999999999998765
No 112
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.90 E-value=4e-23 Score=164.40 Aligned_cols=139 Identities=17% Similarity=0.246 Sum_probs=110.8
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEe-CcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCc
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKF-KGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGE 79 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~-~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~ 79 (145)
||++|+.|+++|..+|||+|||+|++|++|+++++||++|+||+ +|++|+|.+||+.+.++|.|.++++++.... .
T Consensus 555 Y~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~~~---~ 631 (746)
T PTZ00342 555 YFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLYSQISFINFCVVYGDDSM---D 631 (746)
T ss_pred ccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHHHhcCCCccEEEEEccCCc---c
Confidence 99999999999988999999999999999999999999999996 8999999999999999999999999986322 3
Q ss_pred eeEEEEEeCCC----------------Cc-cCH---------------HHHHHH---H--HhccccccCceEEEEecc--
Q 038977 80 VPVAFVVRSNG----------------FE-LTE---------------EAIKEY---I--AKQVVFYKRLHKVHFVHA-- 120 (145)
Q Consensus 80 ~~~~~v~~~~~----------------~~-~~~---------------~~l~~~---l--~~~l~~~~~p~~~~~v~~-- 120 (145)
.+++++++... .. .+. +.+.+. + +..|..+..++.++++.+
T Consensus 632 ~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~ 711 (746)
T PTZ00342 632 GPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETINNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVW 711 (746)
T ss_pred ccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhhccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCC
Confidence 56677665431 00 000 111111 2 236999999999988831
Q ss_pred ---CCCCCCCcccHHHHHHHHHccC
Q 038977 121 ---IPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 121 ---~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
--+||+.|++|..+.+.|...|
T Consensus 712 t~~~~lTpt~KlkR~~v~~~y~~~i 736 (746)
T PTZ00342 712 DTNNYLTPTFKVKRFYVFKDYAFFI 736 (746)
T ss_pred CCCCccChhhhhhHHHHHHHHHHHH
Confidence 2489999999999999887543
No 113
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.89 E-value=3.5e-23 Score=162.32 Aligned_cols=142 Identities=23% Similarity=0.325 Sum_probs=108.0
Q ss_pred CCCChhhhhcccCCCCeeecCceEEE-c---CCCeEEEEeecCCeEEe-CcEEeChHHHH--HHHhcCCCcceEEEEeec
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYV-D---HDDEVFIVDRVKEIIKF-KGFQVPPAEIE--ALLLSHPSIADATVVPQK 73 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~-~---~~g~l~~~GR~d~~i~~-~G~~v~~~~ie--~~l~~~~~v~~~~~~~~~ 73 (145)
||++|+.|.+.|..+|||+|||++++ | ++|.++++||+||++++ +|++|+|.++| ..+.++|.|.++++++.+
T Consensus 437 Y~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p~V~~a~VvG~~ 516 (624)
T PRK12582 437 YHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAACSPVIHDAVVAGQD 516 (624)
T ss_pred ccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhcCcchheEEEEcCC
Confidence 99999999999987999999999998 4 46899999999999996 89999999885 677889999999999988
Q ss_pred CCCCCceeEEE------EEeCCCC----ccCHHHHHHHHHhcccccc--------CceEEEEeccCC------CCCCCcc
Q 038977 74 DEVAGEVPVAF------VVRSNGF----ELTEEAIKEYIAKQVVFYK--------RLHKVHFVHAIP------KSPSGKI 129 (145)
Q Consensus 74 ~~~~~~~~~~~------v~~~~~~----~~~~~~l~~~l~~~l~~~~--------~p~~~~~v~~~p------~t~~gK~ 129 (145)
+...++.++.- +....+. ..+.+++.+.+...+..++ +|+.+.+++.+| +|++||+
T Consensus 517 ~~~~g~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~ 596 (624)
T PRK12582 517 RAFIGLLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSAHNAEAGGSSSRIARALLMTEPPSIDAGEITDKGYI 596 (624)
T ss_pred CCcEEEEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHHhhcCCChhheEEEEEeCCCCCccCCcCCccccc
Confidence 77444332210 0111110 0122455555555555554 999999997765 5788889
Q ss_pred cHHHHHHHHHccC
Q 038977 130 LRKDLIAKLASSM 142 (145)
Q Consensus 130 ~r~~l~~~~~~~~ 142 (145)
.|+.+.+.|.+.|
T Consensus 597 ~R~~~~~~y~~~i 609 (624)
T PRK12582 597 NQRAVLERRAALV 609 (624)
T ss_pred cHHHHHHHHHHHH
Confidence 9999999988765
No 114
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.89 E-value=2.1e-22 Score=155.41 Aligned_cols=138 Identities=27% Similarity=0.380 Sum_probs=103.9
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeec--CCCCC
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQK--DEVAG 78 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~--~~~~~ 78 (145)
||+.+.. ...+..+|||+|||+++++++|.++++||.+|+++++|.+|+|.+||+.+.+++.|.++.+++.. +...+
T Consensus 400 y~~~~~~-~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~~~~ 478 (545)
T PRK07768 400 YLTMDGF-IPAQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERAAARVEGVRPGNAVAVRLDAGHSR 478 (545)
T ss_pred ccCCCCC-cccccCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHHHHHHhCcccccceEEEEEecCCCCc
Confidence 5654433 33334588999999999999999999999999999999999999999999999999987666543 33334
Q ss_pred ceeEEEEEeCCCCc-cCHHHHHHHHHhccccc--cCceEEEEec--cCCCCCCCcccHHHHHHHHH
Q 038977 79 EVPVAFVVRSNGFE-LTEEAIKEYIAKQVVFY--KRLHKVHFVH--AIPKSPSGKILRKDLIAKLA 139 (145)
Q Consensus 79 ~~~~~~v~~~~~~~-~~~~~l~~~l~~~l~~~--~~p~~~~~v~--~~p~t~~gK~~r~~l~~~~~ 139 (145)
+..++++....... ....++...+.+.+... ..|..+.+++ .||+|++||++|+.|++.|.
T Consensus 479 ~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 479 EGFAVAVESNAFEDPAEVRRIRHQVAHEVVAEVGVRPRNVVVLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred eEEEEEEEecccccHHHHHHHHHHHHHHHHHHhCCCccEEEEeCCCcCCCCCchhHHHHHHHHhcC
Confidence 44444444332211 12235666777766544 5788888886 89999999999999999875
No 115
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.87 E-value=3e-21 Score=143.82 Aligned_cols=110 Identities=24% Similarity=0.345 Sum_probs=96.4
Q ss_pred CeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCccC-
Q 038977 16 GLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFELT- 94 (145)
Q Consensus 16 ~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 94 (145)
.|++|||++++|++|.+++.||.||+|+++|.+|+|.+||+.+.++|.|.++++.. .++.+.+++++.++....
T Consensus 275 ~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~~~~~ 349 (386)
T TIGR02372 275 RRLDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDADEAE 349 (386)
T ss_pred ceeecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCCChHH
Confidence 37999999999999999999999999999999999999999999999999988852 245677777776543322
Q ss_pred -HHHHHHHHHhccccccCceEEEEeccCCCCCCCccc
Q 038977 95 -EEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKIL 130 (145)
Q Consensus 95 -~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~ 130 (145)
.+++.+++.++++.+..|..+.+++.+|+|++||++
T Consensus 350 ~~~~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 350 LEIELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 468889999999999999999999999999999984
No 116
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=99.86 E-value=3.2e-21 Score=148.77 Aligned_cols=139 Identities=30% Similarity=0.398 Sum_probs=111.5
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEe-CcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCc
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKF-KGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGE 79 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~-~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~ 79 (145)
||++|++|+++|+.+||++|||+|+++++|.|+++||+++++|+ .|++|.|..||++..+.+.|...++++.... .
T Consensus 512 YyK~p~~T~e~ideDGWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~---~ 588 (691)
T KOG1256|consen 512 YYKDPEKTAEAIDEDGWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLR---S 588 (691)
T ss_pred ccCChHHHhhhhccccccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcch---h
Confidence 99999999999999999999999999999999999999999999 9999999999999999999999999977654 3
Q ss_pred eeEEEEEeCCCCcc----------CH--------------HHHHHHHH-hccccccCceEEEEe------ccCCCCCCCc
Q 038977 80 VPVAFVVRSNGFEL----------TE--------------EAIKEYIA-KQVVFYKRLHKVHFV------HAIPKSPSGK 128 (145)
Q Consensus 80 ~~~~~v~~~~~~~~----------~~--------------~~l~~~l~-~~l~~~~~p~~~~~v------~~~p~t~~gK 128 (145)
.++++|++...... +. .++.+..+ ..+..+.....|.+. +.-.+||+-|
T Consensus 589 ~LvaiVvpd~e~~~~~a~~~~~~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK 668 (691)
T KOG1256|consen 589 FLVAIVVPDPEVLKSWAAKDGVKGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLK 668 (691)
T ss_pred cEEEEEecChhhchhhHHHccCchhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhh
Confidence 66777766433211 00 11222211 235667777777774 5566799999
Q ss_pred ccHHHHHHHHHccC
Q 038977 129 ILRKDLIAKLASSM 142 (145)
Q Consensus 129 ~~r~~l~~~~~~~~ 142 (145)
++|..+.+.|..+|
T Consensus 669 ~KR~~l~~~yk~~I 682 (691)
T KOG1256|consen 669 IKRPQLLKYYKKQI 682 (691)
T ss_pred hhhHHHHHHHHHHH
Confidence 99999999998775
No 117
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=99.85 E-value=3.1e-21 Score=149.31 Aligned_cols=138 Identities=26% Similarity=0.435 Sum_probs=106.5
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEe-CcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCc
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKF-KGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGE 79 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~-~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~ 79 (145)
||++|++|+++|+.+|||+|||+|.+|++|+|+++||++++|++ +|++|.|+.||+.+.++|.|..+++++..+.
T Consensus 434 Yyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg~~k~---- 509 (613)
T COG1022 434 YYKNPEATAEAFTEDGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVGDDKK---- 509 (613)
T ss_pred hcCChHHHhhhccccCCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEecCCc----
Confidence 99999999999999999999999999999999999999999999 9999999999999999999999999994444
Q ss_pred eeEEEEEeCCCCc------------cCH------HHHHH----HH---HhccccccCceEEEEe------ccCCCCCCCc
Q 038977 80 VPVAFVVRSNGFE------------LTE------EAIKE----YI---AKQVVFYKRLHKVHFV------HAIPKSPSGK 128 (145)
Q Consensus 80 ~~~~~v~~~~~~~------------~~~------~~l~~----~l---~~~l~~~~~p~~~~~v------~~~p~t~~gK 128 (145)
.+.+++++....- .+. .++.+ .+ ......+..+..++.. +.--.|++-|
T Consensus 510 ~~~AlIvp~~~~l~~~a~~~~~~~~~~~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~k 589 (613)
T COG1022 510 FLVALIVPDFDALEKWAESLNKVISASREELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLK 589 (613)
T ss_pred ceEEEEeCCHHHHHHHHHhccccccCCHHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccchh
Confidence 6666666543210 011 11211 11 2223445555555555 2345699999
Q ss_pred ccHHHHHHHHHccC
Q 038977 129 ILRKDLIAKLASSM 142 (145)
Q Consensus 129 ~~r~~l~~~~~~~~ 142 (145)
++|..+.+.+...+
T Consensus 590 lkR~~i~~~~~~~i 603 (613)
T COG1022 590 LKRHVILDRYKDEI 603 (613)
T ss_pred hhHHHHHHhhhhHH
Confidence 99999998887665
No 118
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.84 E-value=5.6e-21 Score=143.42 Aligned_cols=139 Identities=24% Similarity=0.379 Sum_probs=115.5
Q ss_pred CCCChhhhhcccCC-CC--eeecCceEEEcCCCeEEEEeecCCeEEe-CcEEeChHHHHHHHhcCCCcceEEEEeecCCC
Q 038977 1 YLNDPEATAATIDV-EG--LLHTGDIGYVDHDDEVFIVDRVKEIIKF-KGFQVPPAEIEALLLSHPSIADATVVPQKDEV 76 (145)
Q Consensus 1 Y~~~~~~t~~~~~~-~~--~~~TGDl~~~~~~g~l~~~GR~d~~i~~-~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~ 76 (145)
||+||+.|++.|.. +| ||+|||+|++.+||+|.+++|++|.+|+ +|+.|+++-+|.++...|.|.+.++++....
T Consensus 497 Y~kn~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~~~- 575 (678)
T KOG1180|consen 497 YYKNEEKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADSNK- 575 (678)
T ss_pred hhCChhhhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEeccccc-
Confidence 89999999999966 78 9999999999999999999999999999 9999999999999999999999999977655
Q ss_pred CCceeEEEEEeCCCCc--------cCH-------------HHHHHHH-----HhccccccCceEEEEecc------CCCC
Q 038977 77 AGEVPVAFVVRSNGFE--------LTE-------------EAIKEYI-----AKQVVFYKRLHKVHFVHA------IPKS 124 (145)
Q Consensus 77 ~~~~~~~~v~~~~~~~--------~~~-------------~~l~~~l-----~~~l~~~~~p~~~~~v~~------~p~t 124 (145)
..++++|+++.+.- ... +++.+.| .++|.++..|..|+++++ --.|
T Consensus 576 --s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k~L~~~ak~~~L~~iEip~~I~l~~e~WTPenGlvT 653 (678)
T KOG1180|consen 576 --SKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLKELIEAAKSQKLERIEIPAKIVLSPEPWTPENGLVT 653 (678)
T ss_pred --ceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHHHHHHHHHhcccccccccceeEecCCCcCCCccccH
Confidence 58888998876431 110 1222222 446999999999998843 3457
Q ss_pred CCCcccHHHHHHHHHccC
Q 038977 125 PSGKILRKDLIAKLASSM 142 (145)
Q Consensus 125 ~~gK~~r~~l~~~~~~~~ 142 (145)
..-|+.|+.++..|.+++
T Consensus 654 ~A~KLKRk~I~~~~k~ei 671 (678)
T KOG1180|consen 654 AALKLKRKEILAAYKKEI 671 (678)
T ss_pred HHHHhhHHHHHHHHHHHH
Confidence 788999999999988765
No 119
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=99.74 E-value=8.2e-18 Score=126.81 Aligned_cols=137 Identities=20% Similarity=0.254 Sum_probs=119.7
Q ss_pred CCCChhhhhccc------CCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecC
Q 038977 1 YLNDPEATAATI------DVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKD 74 (145)
Q Consensus 1 Y~~~~~~t~~~~------~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~ 74 (145)
|.+.+.+|++.+ .+|-||.|||+-..|+.|.+||.+|..|.+..+|+||+..++|+.|..+..++++.|+++.-
T Consensus 467 Y~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l~~~~~~~dv~VYGV~V 546 (649)
T KOG1179|consen 467 YAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVLSALDFLQDVNVYGVTV 546 (649)
T ss_pred ccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHHhhhccccceeEEEEec
Confidence 556566666654 66779999999999999999999999999999999999999999999999999999998886
Q ss_pred CCC-CceeEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHH
Q 038977 75 EVA-GEVPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAK 137 (145)
Q Consensus 75 ~~~-~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~ 137 (145)
+.. |..-.+.+...+..+.+..++...++..||.|.+|..+.+++++++|.+-|..+.+|++.
T Consensus 547 P~~EGRaGMAaI~~~p~~~~d~~~l~~~l~~~LP~YA~P~FlRl~~~i~~TgTFKl~K~~L~~e 610 (649)
T KOG1179|consen 547 PGYEGRAGMAAIVLDPTTEKDLEKLYQHLRENLPSYARPRFLRLQDEIEKTGTFKLQKTELQKE 610 (649)
T ss_pred CCccCccceEEEEecCcccchHHHHHHHHHhhCccccchHHHHHHhhhhcccchhhHHHHHHHc
Confidence 533 334445555677777888999999999999999999999999999999999999999875
No 120
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.72 E-value=3.1e-17 Score=132.19 Aligned_cols=122 Identities=25% Similarity=0.420 Sum_probs=111.1
Q ss_pred CCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCcc-
Q 038977 15 EGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFEL- 93 (145)
Q Consensus 15 ~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~- 93 (145)
+.+|+|||+|+...+|.+.+.||.|+.||.+|.++.+.+|+..+..+|.|.++......+...++.+.+++........
T Consensus 453 ~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~~ 532 (1032)
T KOG1178|consen 453 ARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELNTVVEVHPDVKEAITLARENSTVGQTLLAFVVERGGSKSV 532 (1032)
T ss_pred hhcccccccceeecCCCEEEEEeccceEEEccEEEehhhhchhhccCcchhhhheeeeeccccCceEEEEEeccCCCCch
Confidence 5589999999999999999999999999999999999999999999999999998888877778889999887665433
Q ss_pred CHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHH
Q 038977 94 TEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIA 136 (145)
Q Consensus 94 ~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~ 136 (145)
....+..++.+.++.+++|..++.++.+|+|++||+++.+|.+
T Consensus 533 ~~~~i~~~l~~~La~y~vPs~~V~l~~vPl~~~GKvDkkaL~~ 575 (1032)
T KOG1178|consen 533 LIRDIRNYLKKELASYMLPSLVVPLAKVPLNPNGKVDKKALLE 575 (1032)
T ss_pred hHHHHHHhhcccccceecceEEEEhhhCCcCCCCCcChhhhhh
Confidence 3467999999999999999999999999999999999999988
No 121
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.69 E-value=3.1e-16 Score=118.18 Aligned_cols=118 Identities=18% Similarity=0.172 Sum_probs=83.0
Q ss_pred hcccCCCCeeecCceEEEcCC-C-----eEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCceeE
Q 038977 9 AATIDVEGLLHTGDIGYVDHD-D-----EVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEVPV 82 (145)
Q Consensus 9 ~~~~~~~~~~~TGDl~~~~~~-g-----~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~ 82 (145)
...|. .+||+|||+++++++ | .+++.||.+|+++++|.+|+|.+||..+..++.|.....+........+.+.
T Consensus 283 ~~~~p-~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~ 361 (422)
T TIGR02155 283 KEALP-VIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELT 361 (422)
T ss_pred ccccc-eeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEE
Confidence 34443 679999999999775 4 4689999999999999999999999999999999844444444443344555
Q ss_pred EEEEeCCCCc-----cC----HHHHHHHHHhccccccCceEEEEe--ccCCCCCCCcccH
Q 038977 83 AFVVRSNGFE-----LT----EEAIKEYIAKQVVFYKRLHKVHFV--HAIPKSPSGKILR 131 (145)
Q Consensus 83 ~~v~~~~~~~-----~~----~~~l~~~l~~~l~~~~~p~~~~~v--~~~p~t~~gK~~r 131 (145)
+.++...+.. .. .+++.+.+++.+.... .+.++ ++||+|+ ||++|
T Consensus 362 ~~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~v~~~~~~~lp~~~-GK~~~ 417 (422)
T TIGR02155 362 LKVELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSM---DVHLVEPGSLPRSE-GKARR 417 (422)
T ss_pred EEEEEecCcccccchHHHHHHHHHHHHHHHhccCcEE---EEEEECCCCccCCC-CCceE
Confidence 6555543321 11 2456666666665543 24444 7999987 99876
No 122
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.56 E-value=5.4e-15 Score=110.17 Aligned_cols=69 Identities=38% Similarity=0.630 Sum_probs=62.5
Q ss_pred CCCChhhhhcccCCC------C--eeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEE
Q 038977 1 YLNDPEATAATIDVE------G--LLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATV 69 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~------~--~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~ 69 (145)
||++++.|...|... | ||+|||++++|++|++++.||.+|+++++|.+|+|.+||+.+..++.|.++.+
T Consensus 332 y~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 332 YLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred ccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 889999998887322 2 99999999999999999999999999999999999999999999999987653
No 123
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.48 E-value=1.5e-13 Score=79.45 Aligned_cols=70 Identities=40% Similarity=0.563 Sum_probs=60.8
Q ss_pred HHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCccCHHHHHHHHHhccccccCc--eEEEEecc-CCCCCCCc
Q 038977 53 EIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRL--HKVHFVHA-IPKSPSGK 128 (145)
Q Consensus 53 ~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p--~~~~~v~~-~p~t~~gK 128 (145)
+||+.+.++++|.++++++.++..+|+.+++++++ +.+++.++++++++.+++| ..++.+++ ||+|++||
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~------~~~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~t~~GK 73 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL------DEEEIRDHLRDKLPPYMVPRRIRFVRLDEELPRTPSGK 73 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE------HHHHHHHHHHHHS-GGGS-SEEEEEEESSSEEBETTSS
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe------eecccccchhhhCCCcceeeEEEEccccCcCCCCCCCC
Confidence 68999999999999999999998888999999888 4489999999999999999 55555677 99999998
No 124
>PTZ00297 pantothenate kinase; Provisional
Probab=99.42 E-value=1.3e-12 Score=109.87 Aligned_cols=127 Identities=17% Similarity=0.097 Sum_probs=95.3
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEe-CcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCc
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKF-KGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGE 79 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~-~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~ 79 (145)
||++|++|++.+ +||+ ++|.|.|+||++|+||. +|++|+|+.||+.+..+|.|..+++++....
T Consensus 832 ~~kdpe~T~e~~--~gW~---------~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k---- 896 (1452)
T PTZ00297 832 KKGEPRRTLPIA--AQWK---------RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSR---- 896 (1452)
T ss_pred ECCChHHHHHhh--CcCc---------cCCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCC----
Confidence 678899998854 5775 68999999999999999 9999999999999999999999999988766
Q ss_pred eeEEEEEeCCCCcc-------------------CHHH--------HHHHH---Hh--ccccccCceEEEEec-c-----C
Q 038977 80 VPVAFVVRSNGFEL-------------------TEEA--------IKEYI---AK--QVVFYKRLHKVHFVH-A-----I 121 (145)
Q Consensus 80 ~~~~~v~~~~~~~~-------------------~~~~--------l~~~l---~~--~l~~~~~p~~~~~v~-~-----~ 121 (145)
.++++|+++...-. +..+ +.+.+ .+ .+..+.+++.+.+++ + -
T Consensus 897 ~lvALVvpd~e~l~~~wa~~~gi~~~~~~~~~~~~~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enG 976 (1452)
T PTZ00297 897 PIIAIVSPNRDTVEFEWRQSHCMGEGGGPARQLGWTELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHST 976 (1452)
T ss_pred ceEEEEEeCHHHHHHHHHHHcCCCccccccccCCHHHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCC
Confidence 36777765531100 1122 22222 11 245567777666652 3 3
Q ss_pred CCCCCCcccHHHHHHHHHccC
Q 038977 122 PKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 122 p~t~~gK~~r~~l~~~~~~~~ 142 (145)
.+||+.|++|..+.+.|.+.|
T Consensus 977 lLTPTlKlKR~~I~~kY~~~I 997 (1452)
T PTZ00297 977 FLTPYGKIRRDAVHSYFSSVI 997 (1452)
T ss_pred cCChhhhhhHHHHHHHHHHHH
Confidence 589999999999999998765
No 125
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.10 E-value=1.6e-09 Score=81.24 Aligned_cols=113 Identities=21% Similarity=0.258 Sum_probs=76.3
Q ss_pred eeecCceEEEcCCCe---------EEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcc-eEEEEeecCCCCCceeEEEEE
Q 038977 17 LLHTGDIGYVDHDDE---------VFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIA-DATVVPQKDEVAGEVPVAFVV 86 (145)
Q Consensus 17 ~~~TGDl~~~~~~g~---------l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~-~~~~~~~~~~~~~~~~~~~v~ 86 (145)
-|+|||++.+.++.| ..+.||.||++++.|++|+|..||+.+.+.+.+. ...++... ....+.+.+.++
T Consensus 303 RYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d~L~V~vE 381 (438)
T COG1541 303 RYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLDELTVRVE 381 (438)
T ss_pred EEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCceEEEEEE
Confidence 599999999977432 6799999999999999999999999999999998 44444443 445556666677
Q ss_pred eCCCCccCH--HHHHHHHHhccccccCce---EEEEeccCCCCCCCcccH
Q 038977 87 RSNGFELTE--EAIKEYIAKQVVFYKRLH---KVHFVHAIPKSPSGKILR 131 (145)
Q Consensus 87 ~~~~~~~~~--~~l~~~l~~~l~~~~~p~---~~~~v~~~p~t~~gK~~r 131 (145)
..+.+.... .++...+.+.+......+ .++.+..+|++. ||..|
T Consensus 382 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~v~~g~l~r~~-~K~kr 430 (438)
T COG1541 382 LENEAEELEDERRLAKKLIKNIKSELGVRVEVELVEPGELPRTE-GKAKR 430 (438)
T ss_pred ecCcccchHHHHHHHHHHHHHHHhhcCCceEEEEEeccceeccc-CceeE
Confidence 665422222 223344444433332222 344447899995 57554
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.04 E-value=4.6e-09 Score=80.05 Aligned_cols=115 Identities=15% Similarity=0.054 Sum_probs=67.8
Q ss_pred eeecCceEEEc-CCCe--------EEEEeecCCeEEeCcEEeChHHHHHHHhcC---CCcceEE-EEeecCCCCCceeEE
Q 038977 17 LLHTGDIGYVD-HDDE--------VFIVDRVKEIIKFKGFQVPPAEIEALLLSH---PSIADAT-VVPQKDEVAGEVPVA 83 (145)
Q Consensus 17 ~~~TGDl~~~~-~~g~--------l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~---~~v~~~~-~~~~~~~~~~~~~~~ 83 (145)
-|+|||++++. .+.| +...||+||+++++|.+|+|.+||++|.+. +.+.... ++..........+.+
T Consensus 299 RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 378 (445)
T TIGR03335 299 NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEEGEITLRV 378 (445)
T ss_pred EeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCCCCceEEE
Confidence 58999999973 2321 455799999999999999999999999994 5554333 333233222224444
Q ss_pred EEEeCCCCccCHHHHHHHHHhc----ccc-------ccCceEEEEe--ccCCCC-CCCcccH
Q 038977 84 FVVRSNGFELTEEAIKEYIAKQ----VVF-------YKRLHKVHFV--HAIPKS-PSGKILR 131 (145)
Q Consensus 84 ~v~~~~~~~~~~~~l~~~l~~~----l~~-------~~~p~~~~~v--~~~p~t-~~gK~~r 131 (145)
.+...+......+++.+.+.+. ++. ......+.++ ..+|++ ..||..|
T Consensus 379 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 379 SLECEDKDNCSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred EEEecCcccchHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 4555443322333333333332 222 2222234444 568887 3588765
No 127
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.93 E-value=1.5e-09 Score=85.84 Aligned_cols=62 Identities=34% Similarity=0.494 Sum_probs=57.8
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCC
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHP 62 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~ 62 (145)
||++|+.|...|..+.+|+|||+++..++|.+.++||.|.++|++|.+|.+.+||..+..++
T Consensus 581 y~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 581 YLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred hcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 89999999999964459999999999999999999999999999999999999999988764
No 128
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=98.62 E-value=2.3e-07 Score=56.33 Aligned_cols=85 Identities=27% Similarity=0.327 Sum_probs=51.7
Q ss_pred cEEeChHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCcc---CHHHHHHHHHhccccccCce-EEEEe--c
Q 038977 46 GFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFEL---TEEAIKEYIAKQVVFYKRLH-KVHFV--H 119 (145)
Q Consensus 46 G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~l~~~l~~~~~p~-~~~~v--~ 119 (145)
|.+|+|.+||+++.++|++...+.+........+.+.+.+....+... ...++.+.+.+.+......+ .+.++ .
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~~~~D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lgv~~~V~lv~~g 80 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTREGGLDELTVRVELRPGFSDDAEDLEALAERIAERLKERLGVRPEVELVPPG 80 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEETTEEEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHSS-EEEEEE-TT
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcCCCCcEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcCceEEEEEECCC
Confidence 889999999999999999995555545544456777777888775432 23455555555444333333 45555 6
Q ss_pred cCCCCCCCcccH
Q 038977 120 AIPKSPSGKILR 131 (145)
Q Consensus 120 ~~p~t~~gK~~r 131 (145)
.||++ .||..|
T Consensus 81 tLpr~-~~K~~R 91 (96)
T PF14535_consen 81 TLPRS-EGKAKR 91 (96)
T ss_dssp -S----SSSS-S
T ss_pred CccCC-CCcceE
Confidence 79998 588765
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=98.60 E-value=7.6e-07 Score=72.76 Aligned_cols=122 Identities=18% Similarity=0.321 Sum_probs=88.2
Q ss_pred CCCCeeecCceEEE------cCCC----eEEEEeecCCeEEeCcEEeChHHHHHHHhc-CCCcceEEEEeecCCCCCcee
Q 038977 13 DVEGLLHTGDIGYV------DHDD----EVFIVDRVKEIIKFKGFQVPPAEIEALLLS-HPSIADATVVPQKDEVAGEVP 81 (145)
Q Consensus 13 ~~~~~~~TGDl~~~------~~~g----~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~-~~~v~~~~~~~~~~~~~~~~~ 81 (145)
.+..|-||||+|++ |.++ .||++|-.++.+.++|.+.+|.+||+.+.. |+.|..+.++... ..+
T Consensus 1216 ~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~~-----glv 1290 (1363)
T KOG3628|consen 1216 LGKSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQAT-----GLV 1290 (1363)
T ss_pred ccccceeeeeeeeeeeeecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEeeC-----CeE
Confidence 45779999999998 3333 599999999999999999999999998875 7999988888442 255
Q ss_pred EEEEEeCCCCccCHHHHHH-HHHhccccccCce-EEEEe--ccCCCCCCCcccHHHHHHHHHcc
Q 038977 82 VAFVVRSNGFELTEEAIKE-YIAKQVVFYKRLH-KVHFV--HAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 82 ~~~v~~~~~~~~~~~~l~~-~l~~~l~~~~~p~-~~~~v--~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+++++...+ .....|.- -++..|..+.+.- .+.|| ..+|+.+.|-.+|..+.+.|..+
T Consensus 1291 VvviE~~gq--~~~~~LvPlIv~~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~ 1352 (1363)
T KOG3628|consen 1291 VVVIECHGQ--QELADLVPLIVNVVLEEHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAG 1352 (1363)
T ss_pred EEEEEecCc--hhHhhhhHHHHHHHHhhcceEEEEEEEecCCccccCCchhhHHHHHHHHHHhc
Confidence 666655542 22222222 2234466555554 55555 56999999999999888776544
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=97.87 E-value=0.00026 Score=54.01 Aligned_cols=56 Identities=23% Similarity=0.287 Sum_probs=42.2
Q ss_pred eeecCceEEEcCCCe--------E-EEEeecCCeEEe---Cc--EEeChHHHHHHHh-cCCCcceEEEEee
Q 038977 17 LLHTGDIGYVDHDDE--------V-FIVDRVKEIIKF---KG--FQVPPAEIEALLL-SHPSIADATVVPQ 72 (145)
Q Consensus 17 ~~~TGDl~~~~~~g~--------l-~~~GR~d~~i~~---~G--~~v~~~~ie~~l~-~~~~v~~~~~~~~ 72 (145)
-|+|||++...++.| + .+.||.+|++++ +| ..|+|..+++.+. ..+.|.+..++..
T Consensus 296 RYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~ 366 (430)
T TIGR02304 296 RYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQT 366 (430)
T ss_pred eeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEc
Confidence 599999999855432 3 488999999986 44 4569999988755 5688888877743
No 131
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=96.76 E-value=0.01 Score=46.67 Aligned_cols=102 Identities=16% Similarity=0.172 Sum_probs=59.3
Q ss_pred eeecCceEEEcC--CC--eEEEEeecCCeEEeCcEEeChHHHHHHHhcC---CC--cceEEEEeecCCCCCceeEEEEEe
Q 038977 17 LLHTGDIGYVDH--DD--EVFIVDRVKEIIKFKGFQVPPAEIEALLLSH---PS--IADATVVPQKDEVAGEVPVAFVVR 87 (145)
Q Consensus 17 ~~~TGDl~~~~~--~g--~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~---~~--v~~~~~~~~~~~~~~~~~~~~v~~ 87 (145)
-|+.||++++.. ++ .+.|+||.+.++.+.|++++-..+..++.+. .+ +.+..+...........-+.++.+
T Consensus 370 RY~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~ 449 (528)
T PF03321_consen 370 RYRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNPPHYVLFWEL 449 (528)
T ss_dssp SEEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSSBEEEEEEEE
T ss_pred eeecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCCCceEEEEEe
Confidence 388999999832 34 7999999999999999999999999998875 22 345555544221122244455555
Q ss_pred CCCCccCHHHHHHHHHhccc-------------cccCceEEEEec
Q 038977 88 SNGFELTEEAIKEYIAKQVV-------------FYKRLHKVHFVH 119 (145)
Q Consensus 88 ~~~~~~~~~~l~~~l~~~l~-------------~~~~p~~~~~v~ 119 (145)
... ..+.+.+.+.+.+.|. ....|..+.++.
T Consensus 450 ~~~-~~~~~~~~~~lD~~L~~~n~~Y~~~R~~~g~L~p~~v~~v~ 493 (528)
T PF03321_consen 450 EGE-PDDLEELAKALDESLQELNPHYRRARESDGQLGPPRVHIVR 493 (528)
T ss_dssp CS--HHHHHHHHHHHHHCS----HHHHHHHHTSTSC---EEEEE-
T ss_pred CCC-chHHHHHHHHHHHHhhhCCchHHHHHhhcCCcCCcEEEEeC
Confidence 544 2233455555555442 345566666663
No 132
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=96.45 E-value=0.0073 Score=50.53 Aligned_cols=120 Identities=16% Similarity=0.309 Sum_probs=66.9
Q ss_pred CeeecCceEEEcCCCeEEEEeecCC-eEEeCcEEeChHHHHH----------HHhcCCCcceEEEEeecCCCCCceeEEE
Q 038977 16 GLLHTGDIGYVDHDDEVFIVDRVKE-IIKFKGFQVPPAEIEA----------LLLSHPSIADATVVPQKDEVAGEVPVAF 84 (145)
Q Consensus 16 ~~~~TGDl~~~~~~g~l~~~GR~d~-~i~~~G~~v~~~~ie~----------~l~~~~~v~~~~~~~~~~~~~~~~~~~~ 84 (145)
.|.|||=+|++ .+|.++++|-++| .....|-+.+..+|-. +++..+.|-++.++- .+..+++
T Consensus 571 ~FmRtGLlGFv-~~gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF~~saf~------~E~~~Vv 643 (1363)
T KOG3628|consen 571 PFMRTGLLGFV-HNGKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVFDVSAFE------DEHIVVV 643 (1363)
T ss_pred hhhhhcceeee-eCCeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEEEEeeee------cceEEEE
Confidence 48899999999 5566666665544 4445777666544433 233344455555553 1233333
Q ss_pred EEeCCCC-ccCHHHHHHHHHhccccccCce--EEEEe--ccCCCCCCCcccHHHHHHHHHccC
Q 038977 85 VVRSNGF-ELTEEAIKEYIAKQVVFYKRLH--KVHFV--HAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 85 v~~~~~~-~~~~~~l~~~l~~~l~~~~~p~--~~~~v--~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
+.-++.+ +.+.-+....+-+.+....... .+.++ +.+|+|+-|-+...++++.|.++-
T Consensus 644 ~~esP~a~e~~~~q~~~~v~q~l~~iHqv~vyCilivP~~tLPrt~~~Gi~~~~~k~~F~~G~ 706 (1363)
T KOG3628|consen 644 VLESPDATEENSFQWMSRVFQALDSIHQVGVYCILIVPANTLPRTPLGGIHNNECKQAFLEGS 706 (1363)
T ss_pred EEeCcchhhhhhhhHHHHHHHHHHHHhcccceEEEEeccccCCCccccccccHHHHHHHHcCC
Confidence 3322222 2222222222222222222222 23333 789999999999999999998875
No 133
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=94.25 E-value=0.93 Score=36.47 Aligned_cols=44 Identities=14% Similarity=0.189 Sum_probs=38.5
Q ss_pred eeecCceEEEcC----CCeEEEEeecCCeEEeCcEEeChHHHHHHHhc
Q 038977 17 LLHTGDIGYVDH----DDEVFIVDRVKEIIKFKGFQVPPAEIEALLLS 60 (145)
Q Consensus 17 ~~~TGDl~~~~~----~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~ 60 (145)
.|+.||.+++.. --.+.|+||.+.++.+.|+++.-.+++.++..
T Consensus 409 RY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 409 RYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred EeecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHH
Confidence 388999999843 23799999999999999999999999998877
No 134
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=88.62 E-value=0.99 Score=36.33 Aligned_cols=45 Identities=13% Similarity=0.159 Sum_probs=38.5
Q ss_pred eeecCceEEEc----CCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcC
Q 038977 17 LLHTGDIGYVD----HDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSH 61 (145)
Q Consensus 17 ~~~TGDl~~~~----~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~ 61 (145)
.|+.||+.+.. .-..+.|++|.+.+..+.|++.+-.++..++.+.
T Consensus 416 RYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~a 464 (606)
T PLN02247 416 RYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQA 464 (606)
T ss_pred EEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHHH
Confidence 37899999983 2357999999999999999999999998888764
No 135
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=88.43 E-value=1.1 Score=36.01 Aligned_cols=45 Identities=11% Similarity=0.160 Sum_probs=38.2
Q ss_pred eeecCceEEEc----CCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcC
Q 038977 17 LLHTGDIGYVD----HDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSH 61 (145)
Q Consensus 17 ~~~TGDl~~~~----~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~ 61 (145)
.|+.||+.+.. ....+.|++|.+.+..+.|++.+-.++..++.+.
T Consensus 422 RYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~a 470 (612)
T PLN02620 422 RYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKNA 470 (612)
T ss_pred EEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHHH
Confidence 37899999983 2357999999999999999999999998887763
No 136
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=66.31 E-value=30 Score=23.01 Aligned_cols=52 Identities=25% Similarity=0.235 Sum_probs=32.6
Q ss_pred hHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCccCHHHHHHHHHhcccc
Q 038977 51 PAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAKQVVF 108 (145)
Q Consensus 51 ~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~ 108 (145)
...|+..+.++++|.++.++...+ .+++.+.+... .....++...+.+.+..
T Consensus 77 a~~i~~~v~~~~~V~~A~vvv~~~-----~a~Vav~~~~~-~~~~~~i~~~V~~~v~~ 128 (177)
T PF09580_consen 77 ADRIANRVKKVPGVEDATVVVTDD-----NAYVAVDLDFN-RFNTKKIKKKVEKAVKS 128 (177)
T ss_pred HHHHHHHHhcCCCceEEEEEEECC-----EEEEEEEeccc-ccchhHHHHHHHHHHHH
Confidence 456778888899999999997644 44444455432 34445555555554443
No 137
>PF08002 DUF1697: Protein of unknown function (DUF1697); InterPro: IPR012545 This family contains many hypothetical bacterial proteins.; PDB: 2HIY_B.
Probab=60.16 E-value=23 Score=22.78 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=22.9
Q ss_pred eEEeCcE-EeChHHHHHHHhcCCCcceEEEEeecCC
Q 038977 41 IIKFKGF-QVPPAEIEALLLSHPSIADATVVPQKDE 75 (145)
Q Consensus 41 ~i~~~G~-~v~~~~ie~~l~~~~~v~~~~~~~~~~~ 75 (145)
-|+++|. +|...++.+.+.+. +..++..+..+.+
T Consensus 10 GINVGG~nki~MaeLr~~l~~~-Gf~~V~Tyi~SGN 44 (137)
T PF08002_consen 10 GINVGGKNKIKMAELREALEDL-GFTNVRTYIQSGN 44 (137)
T ss_dssp S-SBTTBS---HHHHHHHHHHC-T-EEEEEETTTTE
T ss_pred ceecCCCCcccHHHHHHHHHHc-CCCCceEEEeeCC
Confidence 4788886 49999999999988 4678877766554
No 138
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=59.37 E-value=50 Score=21.94 Aligned_cols=53 Identities=28% Similarity=0.238 Sum_probs=32.1
Q ss_pred hHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCcc-CHHHHHHHHHhcccc
Q 038977 51 PAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFEL-TEEAIKEYIAKQVVF 108 (145)
Q Consensus 51 ~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~l~~~l~~ 108 (145)
...|.+.+.++|+|.++.++...+. .++.+.+..+... ...++...+.+.+..
T Consensus 56 A~~Ia~~v~~v~~V~dA~vvVtg~~-----A~Vgv~~~~~~~~~~~~~iK~~Va~~Vk~ 109 (158)
T TIGR02898 56 ADEIASEAAKVKGVKDATVVITGNY-----AYVGVDLTNGLEGSVTDELKEKVAETVKS 109 (158)
T ss_pred HHHHHHHHhcCCCCceEEEEEECCE-----EEEEEEcCCCcchhhHHHHHHHHHHHHHh
Confidence 3567777788999999999866443 3444444443322 235566666555444
No 139
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=52.04 E-value=15 Score=27.84 Aligned_cols=34 Identities=21% Similarity=0.402 Sum_probs=25.1
Q ss_pred CCeeecCceEEEcCC--------CeEEEEeecCCeEEeCcEEe
Q 038977 15 EGLLHTGDIGYVDHD--------DEVFIVDRVKEIIKFKGFQV 49 (145)
Q Consensus 15 ~~~~~TGDl~~~~~~--------g~l~~~GR~d~~i~~~G~~v 49 (145)
.+...|.|+|.+..+ ..+.++||.+ ...++|+..
T Consensus 317 p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~-~ae~RGCs~ 358 (365)
T PF04443_consen 317 PGFILTEDLGVLHGDDDCGCRKGKYFEVLGRAD-GAEIRGCSL 358 (365)
T ss_pred CcEEEEcceeeecCCCCCCCccCCEEEEEeCCC-CCccCCcHH
Confidence 456889999987543 2799999998 345567665
No 140
>PRK04306 50S ribosomal protein L21e; Reviewed
Probab=50.77 E-value=20 Score=21.74 Aligned_cols=32 Identities=16% Similarity=0.164 Sum_probs=26.2
Q ss_pred eecCceEEEcCCCeE-------EEEeecCCeEEeCcEEe
Q 038977 18 LHTGDIGYVDHDDEV-------FIVDRVKEIIKFKGFQV 49 (145)
Q Consensus 18 ~~TGDl~~~~~~g~l-------~~~GR~d~~i~~~G~~v 49 (145)
|.-||++-++-|+.+ ++.||+..++.+.|..+
T Consensus 35 y~~Gd~V~I~~d~sv~kGmPh~~yhGkTG~V~~v~~~A~ 73 (98)
T PRK04306 35 FEEGDKVHIVIDPSVHKGMPHPRFHGKTGTVVGKRGRAY 73 (98)
T ss_pred ccCCCEEEEEecCceecCCccccccCCCEEEEeecCeEE
Confidence 888999999888754 48899988888877654
No 141
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=50.54 E-value=24 Score=15.67 Aligned_cols=18 Identities=22% Similarity=0.549 Sum_probs=13.8
Q ss_pred EcCCCeEEEEeecCCeEE
Q 038977 26 VDHDDEVFIVDRVKEIIK 43 (145)
Q Consensus 26 ~~~~g~l~~~GR~d~~i~ 43 (145)
++++|.+++..+....|.
T Consensus 9 v~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp EETTSEEEEEECCCTEEE
T ss_pred EeCCCCEEEEECCCCEEE
Confidence 458999999987766654
No 142
>PF06092 DUF943: Enterobacterial putative membrane protein (DUF943); InterPro: IPR010351 This family consists of several hypothetical proteins from Escherichia coli, Yersinia pestis and Salmonella typhi.
Probab=44.85 E-value=13 Score=24.61 Aligned_cols=17 Identities=35% Similarity=0.413 Sum_probs=14.4
Q ss_pred EEEEeccCCCCCCCccc
Q 038977 114 KVHFVHAIPKSPSGKIL 130 (145)
Q Consensus 114 ~~~~v~~~p~t~~gK~~ 130 (145)
.-++|+.+|.|.+||+.
T Consensus 42 ~~IlV~~~P~Td~gKI~ 58 (157)
T PF06092_consen 42 SDILVKNFPLTDSGKIN 58 (157)
T ss_pred eeeeeecCCCCccchhh
Confidence 35678999999999986
No 143
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=39.94 E-value=32 Score=16.70 Aligned_cols=16 Identities=13% Similarity=0.310 Sum_probs=12.9
Q ss_pred EEEcCCCeEEEEeecC
Q 038977 24 GYVDHDDEVFIVDRVK 39 (145)
Q Consensus 24 ~~~~~~g~l~~~GR~d 39 (145)
.-+|.+|.+|+.|-++
T Consensus 18 IavD~~GNiYv~G~T~ 33 (38)
T PF06739_consen 18 IAVDSNGNIYVTGYTN 33 (38)
T ss_pred EEECCCCCEEEEEeec
Confidence 3468999999999765
No 144
>PTZ00189 60S ribosomal protein L21; Provisional
Probab=37.33 E-value=41 Score=22.37 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=25.7
Q ss_pred eeecCceEEEcCCCeE-------EEEeecCCeEEeCcEEe
Q 038977 17 LLHTGDIGYVDHDDEV-------FIVDRVKEIIKFKGFQV 49 (145)
Q Consensus 17 ~~~TGDl~~~~~~g~l-------~~~GR~d~~i~~~G~~v 49 (145)
-|.-||++-+.-||.+ ++.||+..++.+.|..+
T Consensus 33 ~yk~GD~VdIk~d~svqkGMPhk~YHGkTG~V~nv~~~A~ 72 (160)
T PTZ00189 33 TFKVGDYVDIVVDSAVHKGMPYKYYHGRTGRVFNVTPRAV 72 (160)
T ss_pred HccCCCEEEEEecCCeecCCCcccccCCCeEEEeecCeEE
Confidence 3888999999888754 48899888888876544
No 145
>PF08255 Leader_Trp: Trp-operon Leader Peptide; InterPro: IPR013205 The tryptophan operon regulatory region of Citrobacter freundii (leader transcript) encodes a 14-residue peptide containing characteristic tandem tryptophan residues. It is about 10 nucleotides shorter than those of Escherichia coli and Salmonella typhimurium [].
Probab=36.69 E-value=17 Score=13.67 Aligned_cols=7 Identities=29% Similarity=0.501 Sum_probs=5.3
Q ss_pred CCCeeec
Q 038977 14 VEGLLHT 20 (145)
Q Consensus 14 ~~~~~~T 20 (145)
-.||++|
T Consensus 7 L~~WWrt 13 (14)
T PF08255_consen 7 LHGWWRT 13 (14)
T ss_pred EeeEEEc
Confidence 3689987
No 146
>PHA02553 6 baseplate wedge subunit; Provisional
Probab=34.93 E-value=2.1e+02 Score=23.63 Aligned_cols=69 Identities=22% Similarity=0.194 Sum_probs=41.7
Q ss_pred CeEEeCcEEeChHHHHHHHhc-CCCcceEEEEeecCCCC---CceeEEEEEeCCCCccCHHHHHHHHHhcccccc
Q 038977 40 EIIKFKGFQVPPAEIEALLLS-HPSIADATVVPQKDEVA---GEVPVAFVVRSNGFELTEEAIKEYIAKQVVFYK 110 (145)
Q Consensus 40 ~~i~~~G~~v~~~~ie~~l~~-~~~v~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~ 110 (145)
.+....+..|.+.+-|....+ .|+|..+.++......+ | .+.+++.+..+..++. .+.+.+...|.++.
T Consensus 306 ~~~rt~~RAVTa~DYE~lA~~~~p~V~rA~~~~~~~~spp~~G-~V~VvVvP~~g~~ls~-~l~~~I~~yL~~rr 378 (611)
T PHA02553 306 RMREAQRRAVTASDYEAFVSERFGSIVQAVQCGGDSLKPPVYG-YVFIAVKPKSGLYLTD-VQKEDIKNYLKKYN 378 (611)
T ss_pred HhhhcccccccHHHHHHHHHhhCCccEEEEEccCCcCCCCCCc-eEEEEEecCCCCCCCH-HHHHHHHHHHHhcC
Confidence 344455677888888888776 68899888775333322 2 4445556665555443 45555555555443
No 147
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=34.48 E-value=1.3e+02 Score=23.11 Aligned_cols=36 Identities=28% Similarity=0.392 Sum_probs=26.6
Q ss_pred CCeEEe-CcEEeChHHHHHHHhcCCCcceEEEEeecC
Q 038977 39 KEIIKF-KGFQVPPAEIEALLLSHPSIADATVVPQKD 74 (145)
Q Consensus 39 d~~i~~-~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~ 74 (145)
-..+.. -|+.+.|.+|++.|.+.+.++-+.++....
T Consensus 106 v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ET 142 (383)
T COG0075 106 VVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNET 142 (383)
T ss_pred eEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccC
Confidence 334444 689999999999999888887766664443
No 148
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=34.47 E-value=75 Score=16.69 Aligned_cols=46 Identities=22% Similarity=0.185 Sum_probs=29.2
Q ss_pred hHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCccCHHHHHHHHHh
Q 038977 51 PAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAK 104 (145)
Q Consensus 51 ~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~ 104 (145)
...|+..|.+.++|..+.+-.... . +.+...... .+..++.+.+++
T Consensus 13 ~~~v~~~l~~~~GV~~v~vd~~~~-----~--v~v~~~~~~-~~~~~i~~~i~~ 58 (62)
T PF00403_consen 13 AKKVEKALSKLPGVKSVKVDLETK-----T--VTVTYDPDK-TSIEKIIEAIEK 58 (62)
T ss_dssp HHHHHHHHHTSTTEEEEEEETTTT-----E--EEEEESTTT-SCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEECCCC-----E--EEEEEecCC-CCHHHHHHHHHH
Confidence 467999999999998776643322 2 223333322 556778877765
No 149
>PF11253 DUF3052: Protein of unknown function (DUF3052); InterPro: IPR021412 This family of proteins with unknown function appears to be restricted to Actinobacteria.
Probab=31.89 E-value=1.4e+02 Score=19.09 Aligned_cols=53 Identities=11% Similarity=0.132 Sum_probs=34.0
Q ss_pred eeecCce----------EEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecC
Q 038977 17 LLHTGDI----------GYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKD 74 (145)
Q Consensus 17 ~~~TGDl----------~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~ 74 (145)
|||.+|- ..++++|.++++-.+... .-.|.|.+|.++-.... ......+....
T Consensus 52 WwR~~DgDL~D~LvDa~~~L~d~G~IWvltPK~gr----~g~V~~~~I~eaA~taG-L~~t~~~~v~~ 114 (127)
T PF11253_consen 52 WWRDDDGDLVDALVDARTNLADDGVIWVLTPKAGR----PGHVEPSDIREAAPTAG-LVQTKSCAVGD 114 (127)
T ss_pred EEECCcchHHHHHHHHHhhhcCCCEEEEEccCCCC----CCCCCHHHHHHHHhhcC-CeeeeeeccCC
Confidence 8888763 334678999998765432 46788999999765554 34444443433
No 150
>KOG2446 consensus Glucose-6-phosphate isomerase [Carbohydrate transport and metabolism]
Probab=31.69 E-value=91 Score=24.59 Aligned_cols=66 Identities=20% Similarity=0.177 Sum_probs=41.6
Q ss_pred CceEEEcCCCeE---EEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEe
Q 038977 21 GDIGYVDHDDEV---FIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVR 87 (145)
Q Consensus 21 GDl~~~~~~g~l---~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~ 87 (145)
|...-.+++..+ .+-.|.+..|.+.|..+-| +|++.|.++....+-+..+......|..+.-++..
T Consensus 88 Ge~iN~tE~RaVlHvaLRn~~~~pi~~dg~~v~p-eV~~vL~~ikeFsd~i~SG~w~g~tgk~itdVvnI 156 (546)
T KOG2446|consen 88 GEHINFTENRAVLHVALRNRANRPILVDGKDVMP-EVENVLDHIKEFSDDIRSGSWKGYTGKKITDVVNI 156 (546)
T ss_pred CcccCCCCCceeeeHHhhCcccCceecCCcccch-hHHHHHHHHHHHHHHhhcCCCCCCCCCeeeeEEEe
Confidence 444444555433 3445778899999999998 49998888755555555555555555554444433
No 151
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=30.85 E-value=57 Score=17.35 Aligned_cols=19 Identities=37% Similarity=0.588 Sum_probs=15.2
Q ss_pred cCceEEEcCCCeEEEEeec
Q 038977 20 TGDIGYVDHDDEVFIVDRV 38 (145)
Q Consensus 20 TGDl~~~~~~g~l~~~GR~ 38 (145)
-|.+.+.+++|...+.|..
T Consensus 32 ~~~i~Y~~~dg~yli~G~l 50 (57)
T PF10411_consen 32 GGGILYVDEDGRYLIQGQL 50 (57)
T ss_dssp TTEEEEEETTSSEEEES-E
T ss_pred CCeEEEEcCCCCEEEEeEE
Confidence 5788999999988888864
No 152
>PF14326 DUF4384: Domain of unknown function (DUF4384)
Probab=30.52 E-value=84 Score=18.00 Aligned_cols=21 Identities=10% Similarity=0.146 Sum_probs=13.8
Q ss_pred eecCceEEE----cCCCeEEEEeec
Q 038977 18 LHTGDIGYV----DHDDEVFIVDRV 38 (145)
Q Consensus 18 ~~TGDl~~~----~~~g~l~~~GR~ 38 (145)
|+.||..++ ..+|+++++...
T Consensus 3 ~~~Ge~v~~~~~~~~~~Yl~l~~~~ 27 (83)
T PF14326_consen 3 YRVGERVRFRVTSNRDGYLYLFYID 27 (83)
T ss_pred ccCCCEEEEEEEeCCCeEEEEEEEC
Confidence 567777765 556777776653
No 153
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=30.25 E-value=61 Score=14.55 Aligned_cols=19 Identities=21% Similarity=0.252 Sum_probs=14.7
Q ss_pred CCCCCCCcccHHHHHHHHH
Q 038977 121 IPKSPSGKILRKDLIAKLA 139 (145)
Q Consensus 121 ~p~t~~gK~~r~~l~~~~~ 139 (145)
+-+..+|+|+..++.+.+.
T Consensus 9 ~D~d~dG~I~~~Ef~~~~~ 27 (29)
T PF00036_consen 9 FDKDGDGKIDFEEFKEMMK 27 (29)
T ss_dssp HSTTSSSEEEHHHHHHHHH
T ss_pred HCCCCCCcCCHHHHHHHHH
Confidence 4467789999999887764
No 154
>PLN00190 60S ribosomal protein L21; Provisional
Probab=29.70 E-value=55 Score=21.76 Aligned_cols=32 Identities=16% Similarity=0.216 Sum_probs=25.0
Q ss_pred eecCceEEEcCCCeE-------EEEeecCCeEEeCcEEe
Q 038977 18 LHTGDIGYVDHDDEV-------FIVDRVKEIIKFKGFQV 49 (145)
Q Consensus 18 ~~TGDl~~~~~~g~l-------~~~GR~d~~i~~~G~~v 49 (145)
|.-||++-+.-||.+ ++.||+..++.+.|..+
T Consensus 34 yk~GD~VdIk~~~svqKGMPhk~YHGkTG~V~nv~~~A~ 72 (158)
T PLN00190 34 FKVGDYVDIKVNGAIHKGMPHKFYHGRTGIVWNVTKRAV 72 (158)
T ss_pred hcCCCEEEEEecCCeecCCCcccccCCCeEEEeecCcEE
Confidence 788999999877653 58899888888876544
No 155
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=29.54 E-value=2.8e+02 Score=21.72 Aligned_cols=91 Identities=23% Similarity=0.400 Sum_probs=49.2
Q ss_pred ecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecC--C------CCCceeEEEEEeC--------CCCccCHHHHHH
Q 038977 37 RVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKD--E------VAGEVPVAFVVRS--------NGFELTEEAIKE 100 (145)
Q Consensus 37 R~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~--~------~~~~~~~~~v~~~--------~~~~~~~~~l~~ 100 (145)
-.++++...|.+ ..|-.++..+-+..+-+++..+- . ..|..++ ++.+. .....+..++..
T Consensus 92 ~~~eVlVT~GA~---~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv-~v~~~~~~g~~~s~~~~~D~~~le~ 167 (420)
T KOG0257|consen 92 PDDEVLVTAGAN---EAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPV-FVPLKPKEGNVSSSDWTLDPEELES 167 (420)
T ss_pred CcccEEEecCch---HHHHHHHHHHcCCCCEEEEecCcchhhhhHHhhcCCcce-eeccccccccccCccccCChHHHHh
Confidence 345667778877 46666666654444444443221 1 1122222 22222 122345566666
Q ss_pred HHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHH
Q 038977 101 YIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLA 139 (145)
Q Consensus 101 ~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~ 139 (145)
.+..+ .+.+++.. |-+|+||+--++..+.+.
T Consensus 168 ~~t~k------Tk~Ii~nt--PhNPtGkvfsReeLe~ia 198 (420)
T KOG0257|consen 168 KITEK------TKAIILNT--PHNPTGKVFSREELERIA 198 (420)
T ss_pred hccCC------ccEEEEeC--CCCCcCcccCHHHHHHHH
Confidence 55553 55666665 889999997766666554
No 156
>cd04717 BAH_polybromo BAH, or Bromo Adjacent Homology domain, as present in polybromo and yeast RSC1/2. The human polybromo protein (BAF180) is a component of the SWI/SNF chromatin-remodeling complex PBAF. It is thought that polybromo participates in transcriptional regulation. Saccharomyces cerevisiae RSC1 and RSC2 are part of the 15-subunit nucleosome remodeling RSC complex. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.
Probab=28.67 E-value=89 Score=19.34 Aligned_cols=29 Identities=24% Similarity=0.255 Sum_probs=20.0
Q ss_pred CeeecCceEEEcCCC--eEEEEeecCCeEEe
Q 038977 16 GLLHTGDIGYVDHDD--EVFIVDRVKEIIKF 44 (145)
Q Consensus 16 ~~~~TGDl~~~~~~g--~l~~~GR~d~~i~~ 44 (145)
..|+.||.+.+..++ ....+||...+...
T Consensus 2 ~~~~vGD~V~v~~~~~~~~~~i~~I~~i~~~ 32 (121)
T cd04717 2 LQYRVGDCVYVANPEDPSKPIIFRIERLWKD 32 (121)
T ss_pred CEEECCCEEEEeCCCCCCCCEEEEEeEEEEC
Confidence 468999999995433 44556777766654
No 157
>PF04784 DUF547: Protein of unknown function, DUF547; InterPro: IPR006869 This is a conserved region found in uncharacterised proteins from Caenorhabditis elegans and Arabidopsis thaliana (Mouse-ear cress).
Probab=27.95 E-value=76 Score=19.68 Aligned_cols=23 Identities=17% Similarity=0.125 Sum_probs=18.9
Q ss_pred CeEEeCcEEeChHHHHHHHhcCC
Q 038977 40 EIIKFKGFQVPPAEIEALLLSHP 62 (145)
Q Consensus 40 ~~i~~~G~~v~~~~ie~~l~~~~ 62 (145)
....++|..+++.+||..+....
T Consensus 50 ~~y~Igg~~~SL~dIe~~ILR~~ 72 (117)
T PF04784_consen 50 VRYNIGGQRFSLDDIEHGILRGN 72 (117)
T ss_pred eEEEECCEEecHHHHHHhhccCC
Confidence 45677999999999999877653
No 158
>PRK00556 minC septum formation inhibitor; Reviewed
Probab=27.32 E-value=1.9e+02 Score=19.97 Aligned_cols=22 Identities=14% Similarity=0.508 Sum_probs=12.1
Q ss_pred CeeecCceEEEcCCCeEEEEeecC
Q 038977 16 GLLHTGDIGYVDHDDEVFIVDRVK 39 (145)
Q Consensus 16 ~~~~TGDl~~~~~~g~l~~~GR~d 39 (145)
+-.|+|..... +|.+.++|...
T Consensus 98 ~~iRSGQ~I~~--~gdvvilGdVn 119 (194)
T PRK00556 98 RVIRSGEEIYS--ANDLIFLGRIN 119 (194)
T ss_pred CceeCCCEEEe--CCCEEEEecCC
Confidence 44666666554 34555555554
No 159
>PF08478 POTRA_1: POTRA domain, FtsQ-type; InterPro: IPR013685 FtsQ/DivIB bacterial division proteins (IPR005548 from INTERPRO) contain an N-terminal POTRA domain (for polypeptide-transport-associated domain). This is found in different types of proteins, usually associated with a transmembrane beta-barrel. FtsQ/DivIB may have chaperone-like roles, which has also been postulated for the POTRA domain in other contexts []. ; PDB: 2ALJ_A 2VH1_B 3J00_Z 2VH2_B.
Probab=26.67 E-value=1e+02 Score=16.52 Aligned_cols=28 Identities=18% Similarity=0.161 Sum_probs=21.3
Q ss_pred EeChHHHHHHHhcCCCcceEEEEeecCC
Q 038977 48 QVPPAEIEALLLSHPSIADATVVPQKDE 75 (145)
Q Consensus 48 ~v~~~~ie~~l~~~~~v~~~~~~~~~~~ 75 (145)
.+++..+++.+.++|.|+++.+--...+
T Consensus 33 ~~~~~~~~~~l~~~p~V~~v~V~r~~P~ 60 (69)
T PF08478_consen 33 SLDLKKIEQRLEKLPWVKSVSVSRRFPN 60 (69)
T ss_dssp CSHHHHHHHCCCCTTTEEEEEEEEETTT
T ss_pred EECHHHHHHHHHcCCCEEEEEEEEeCCC
Confidence 4557788888888999999988755443
No 160
>KOG1556 consensus 26S proteasome regulatory complex, subunit RPN8/PSMD7 [Posttranslational modification, protein turnover, chaperones]
Probab=25.70 E-value=27 Score=25.03 Aligned_cols=11 Identities=36% Similarity=0.308 Sum_probs=8.4
Q ss_pred CCeeecCceEE
Q 038977 15 EGLLHTGDIGY 25 (145)
Q Consensus 15 ~~~~~TGDl~~ 25 (145)
-|||+||=--+
T Consensus 93 vGWYhTGPkl~ 103 (309)
T KOG1556|consen 93 VGWYHTGPKLR 103 (309)
T ss_pred eeeeccCCccc
Confidence 68999995544
No 161
>PF04865 Baseplate_J: Baseplate J-like protein; InterPro: IPR006949 The temperate bacteriophage P2 has four defined tail genes: V, J, W and I. Their order is the late gene promoter, VWJI, followed by the tail fibre genes H and G and then a transcription terminator. BAP V protein is the small spike at the tip of the tail and basal plate assembly protein J lies at the edge of the baseplate []. This family also includes a number of bacterial homologues, which are thought to have been horizontally transferred.
Probab=25.41 E-value=2.4e+02 Score=19.64 Aligned_cols=66 Identities=21% Similarity=0.306 Sum_probs=37.8
Q ss_pred ecCCeEEeCcEEeChHHHHHHHhcC-CCcceEEEEeecCCCCCceeEEEEEeCCCCccCHHHHHHHHHhcc
Q 038977 37 RVKEIIKFKGFQVPPAEIEALLLSH-PSIADATVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAKQV 106 (145)
Q Consensus 37 R~d~~i~~~G~~v~~~~ie~~l~~~-~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l 106 (145)
|....+..........+.+....+. |+|.++.++...... + .+.+++....+ .-..++.+.+++.+
T Consensus 107 R~~~~~~~~~~~gt~~dy~~~a~~~~~gV~~v~v~~~~~~~-G-~V~v~v~~~~g--~~~~~l~~~V~~~i 173 (243)
T PF04865_consen 107 RILESLRSPSRAGTADDYEYWALSVSPGVADVKVYPNWNGP-G-TVDVYVLGANG--APSQELLAAVQAYI 173 (243)
T ss_pred HHHHhhcccccCCCHHHHHHHHHHhCCCceEEEEecCCCCC-C-EEEEEEccCCC--CCCHHHHHHHHHHh
Confidence 3333444334456678888888888 999999999776532 2 33344444333 22234444444444
No 162
>KOG1767 consensus 40S ribosomal protein S25 [Translation, ribosomal structure and biogenesis]
Probab=25.35 E-value=42 Score=20.62 Aligned_cols=46 Identities=17% Similarity=0.223 Sum_probs=35.1
Q ss_pred HHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 95 EEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 95 ~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
+++..+.+....|.+......++.+.+-.. |.+-|..|++...+++
T Consensus 44 dqatydkl~kevp~~k~it~svl~dRlkIn--gsLAr~alr~L~~kG~ 89 (110)
T KOG1767|consen 44 DQATYDKLLKEVPKYKLITPSVLSDRLKIN--GSLARAALRELSNKGV 89 (110)
T ss_pred cHHHHHHHHHhcccceeecHHHhhhhhhhc--hHHHHHHHHHHHhcch
Confidence 366777888888888887766666765554 8899999998887764
No 163
>PF01426 BAH: BAH domain; InterPro: IPR001025 The BAH (bromo-adjacent homology) family contains proteins such as eukaryotic DNA (cytosine-5) methyltransferases IPR001525 from INTERPRO, the origin recognition complex 1 (Orc1) proteins, as well as several proteins involved in transcriptional regulation. The BAH domain appears to act as a protein-protein interaction module specialised in gene silencing, as suggested for example by its interaction within yeast Orc1p with the silent information regulator Sir1p. The BAH module might therefore play an important role by linking DNA methylation, replication and transcriptional regulation [].; GO: 0003677 DNA binding; PDB: 4DA4_A 3PT6_B 3AV6_A 3AV5_A 3AV4_A 3PT9_A 3SWR_A 3PTA_A 1M4Z_A 1ZBX_A ....
Probab=25.07 E-value=1.4e+02 Score=17.87 Aligned_cols=27 Identities=41% Similarity=0.513 Sum_probs=18.8
Q ss_pred eecCceEEEcCCC--eEEEEeecCCeEEe
Q 038977 18 LHTGDIGYVDHDD--EVFIVDRVKEIIKF 44 (145)
Q Consensus 18 ~~TGDl~~~~~~g--~l~~~GR~d~~i~~ 44 (145)
|+.||.+.+.++. .-+.+||..++..-
T Consensus 3 ~~vGD~V~v~~~~~~~~~~v~~I~~i~~~ 31 (119)
T PF01426_consen 3 YKVGDFVYVKPDDPPEPPYVARIEEIWED 31 (119)
T ss_dssp EETTSEEEEECTSTTSEEEEEEEEEEEEE
T ss_pred EeCCCEEEEeCCCCCCCCEEEEEEEEEcC
Confidence 7889999985554 66666777655433
No 164
>COG2139 RPL21A Ribosomal protein L21E [Translation, ribosomal structure and biogenesis]
Probab=25.05 E-value=73 Score=19.29 Aligned_cols=30 Identities=17% Similarity=0.241 Sum_probs=22.7
Q ss_pred eecCceEEEcCCCe-------EEEEeecCCeEEeCcE
Q 038977 18 LHTGDIGYVDHDDE-------VFIVDRVKEIIKFKGF 47 (145)
Q Consensus 18 ~~TGDl~~~~~~g~-------l~~~GR~d~~i~~~G~ 47 (145)
|.-||.+.++-|+. -+|.|++.-++-..|.
T Consensus 33 y~~Gd~V~I~IdpSv~kGmPh~rf~G~TG~Vvg~~g~ 69 (98)
T COG2139 33 YKVGDKVHIDIDPSVHKGMPHPRFQGKTGTVVGVRGR 69 (98)
T ss_pred ccCCCEEEEEeCcccccCCCCccccCcceEEEeccCC
Confidence 88899999987764 4488888777766554
No 165
>PF12433 PV_NSP1: Parvovirus non-structural protein 1 ; InterPro: IPR021076 Parvoviruses are some of the smallest viruses containing linear, non-segmented single-stranded DNA genomes, with an average genome size of 5000 nucleotides. Parvoviruses have been described that infect a wide range of invertebrates and vertebrates and are well known for causing enteric disease in mammals. Genomes contains two large ORFs: NS1 and VP1; other ORFs are found in some sub-types and different gene products can arise from splice variants and the use of different start codons []. This entry represents a domain of the parvovirus non-capsid protein 1. It is found immediately N-terminal to the helicase domain and its function is unknown. Parvoviral NS1 regulates host gene expression through histone acetylation [].
Probab=24.47 E-value=46 Score=19.08 Aligned_cols=14 Identities=29% Similarity=0.797 Sum_probs=11.9
Q ss_pred CCCeeecCceEEEc
Q 038977 14 VEGLLHTGDIGYVD 27 (145)
Q Consensus 14 ~~~~~~TGDl~~~~ 27 (145)
.+|||.+||-|.++
T Consensus 38 mdGYy~agngG~i~ 51 (80)
T PF12433_consen 38 MDGYYAAGNGGWID 51 (80)
T ss_pred CCceEEcCCCceee
Confidence 47899999999885
No 166
>PRK12434 tRNA pseudouridine synthase A; Reviewed
Probab=24.36 E-value=2.7e+02 Score=19.82 Aligned_cols=63 Identities=21% Similarity=0.238 Sum_probs=34.6
Q ss_pred HHHHHHHhcCCCcceEEEEeecCCCCCc----eeEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEe
Q 038977 52 AEIEALLLSHPSIADATVVPQKDEVAGE----VPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFV 118 (145)
Q Consensus 52 ~~ie~~l~~~~~v~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v 118 (145)
+.||++|..+.. .++.+++..+...|- .++.+ .. ....+...+...+++.||..-....+..+
T Consensus 30 ~~le~aL~~~~~-~~~~~~~agRTD~GVHA~~qv~~f-~~--~~~~~~~~l~~~lN~~LP~dI~V~~~~~v 96 (245)
T PRK12434 30 GKIESVLSEMTG-EEIEIIGCGRTDAGVHALNQVANF-QT--DEKLSEDKIKKYLNEYLPNDIVVTNVEEV 96 (245)
T ss_pred HHHHHHHHHHhC-CCeEEEEeccCCCCcCccCcEEEE-Ec--CCCCCHHHHHHHHHccCCCCeEEEEEEEC
Confidence 467777777643 455555555443331 22222 11 12245678889999988776544444444
No 167
>PF11794 HpaB_N: 4-hydroxyphenylacetate 3-hydroxylase N terminal; InterPro: IPR024674 This domain is found in the N terminus of HpaB, which encodes part of the 4-hydroxyphenylacetate 3-hydroxylase from Escherichia coli []. The enzyme is NADH-dependent and uses FAD as the redox chromophore. The domain is also found in pyoverdin chromophore biosynthetic protein (PvcC), which may play a role in one of the proposed hydroxylation steps of pyoverdine chromophore biosynthesis [] and in 4-hydroxybutyryl-CoA dehydratase (4-BUDH), a key enzyme in the metabolism of gamma-aminobutyrate [].; PDB: 3HWC_D 1U8V_D 2YYM_A 2YYI_A 2YYJ_A 2YYL_A 2YYG_A 2YYK_A.
Probab=23.97 E-value=1e+02 Score=22.40 Aligned_cols=55 Identities=25% Similarity=0.347 Sum_probs=30.8
Q ss_pred cCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcC-CCcceEEEEeecCC--CCCceeEEEEEeCC
Q 038977 27 DHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSH-PSIADATVVPQKDE--VAGEVPVAFVVRSN 89 (145)
Q Consensus 27 ~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~-~~v~~~~~~~~~~~--~~~~~~~~~v~~~~ 89 (145)
+++-.++++.+.+|-|.++|.+. +... +...+..++....- ...+..++|.++..
T Consensus 158 d~d~~lrVVee~~dGIvVrGAK~--------~~T~a~~adei~V~p~~~~~~~d~dyAv~FavP~~ 215 (264)
T PF11794_consen 158 DPDVYLRVVEETDDGIVVRGAKM--------LATGAPYADEILVFPTRAMRPGDEDYAVAFAVPMN 215 (264)
T ss_dssp SCCSB-EEEEE-SSEEEEEEEEE--------EEETGCCSSEEEE--SSSSTTCCGGG-EEEEEETT
T ss_pred CCCceEEEEEEcCCCEEEeChhh--------hhcCCcccccEEEeeccCCCCCCCceEEEEEccCC
Confidence 45678999999999999999987 2333 44445555444331 22335555555544
No 168
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=23.77 E-value=55 Score=17.39 Aligned_cols=13 Identities=15% Similarity=0.353 Sum_probs=9.0
Q ss_pred eecCceEEEcCCC
Q 038977 18 LHTGDIGYVDHDD 30 (145)
Q Consensus 18 ~~TGDl~~~~~~g 30 (145)
|.+||++++-.+|
T Consensus 1 f~~GDvV~LKSGG 13 (53)
T PF09926_consen 1 FKIGDVVQLKSGG 13 (53)
T ss_pred CCCCCEEEEccCC
Confidence 5678888885555
No 169
>PF07193 DUF1408: Protein of unknown function (DUF1408); InterPro: IPR009848 This entry is represented by Bacteriophage bIL285, Orf11. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Lactococcus lactis and related phage proteins of around 75 residues in length. The function of this family is unknown.
Probab=23.28 E-value=97 Score=17.16 Aligned_cols=13 Identities=23% Similarity=0.501 Sum_probs=11.1
Q ss_pred cCCCeEEEEeecC
Q 038977 27 DHDDEVFIVDRVK 39 (145)
Q Consensus 27 ~~~g~l~~~GR~d 39 (145)
.+||.+|+..|+.
T Consensus 41 r~dgs~y~~~r~~ 53 (75)
T PF07193_consen 41 RPDGSMYMTSRKK 53 (75)
T ss_pred cCCCeEEEEEccc
Confidence 5789999999876
No 170
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=22.72 E-value=91 Score=13.83 Aligned_cols=18 Identities=33% Similarity=0.209 Sum_probs=14.2
Q ss_pred CCCCCCcccHHHHHHHHH
Q 038977 122 PKSPSGKILRKDLIAKLA 139 (145)
Q Consensus 122 p~t~~gK~~r~~l~~~~~ 139 (145)
-...+|+|+..+++..+.
T Consensus 10 D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 10 DKDGDGFIDFEELRAILR 27 (31)
T ss_dssp -TTSSSEEEHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHH
Confidence 456789999999998876
No 171
>PF03250 Tropomodulin: Tropomodulin; InterPro: IPR004934 Actin filaments have an intrinsic polarity, each with a fast-growing (barbed) end and a slow-growing (pointed) end. To regulate the dynamics at these ends, capping proteins have evolved that specifically bind to either the barbed or the pointed ends of the filament, where they block the association and dissociation of monomers. Pointed ends, for which actin monomers have significantly lower association and dissociation rate-constants than for barbed, are capped by either the Arp2/3 complex or tropomodulins []. Tropomodulin is a novel tropomyosin regulatory protein that binds to the end of erythrocyte tropomyosin and blocks head-to-tail association of tropomyosin along actin filaments []. Limited proteolysis shows this protein is composed of two domains. The unstructured tropomyosin-binding region at the N terminus has an actin pointed-end-capping activity that is dramatically up-regulated by tropomyosin coating of the actin filament[]. The second region is found near the C terminus. This tropomyosin-independent capping-domain caps pure actin. ; GO: 0005523 tropomyosin binding, 0005856 cytoskeleton
Probab=22.25 E-value=1.7e+02 Score=19.22 Aligned_cols=31 Identities=19% Similarity=0.195 Sum_probs=24.7
Q ss_pred cCceEEEEeccCCCCCCCcccHHHHHHHHHc
Q 038977 110 KRLHKVHFVHAIPKSPSGKILRKDLIAKLAS 140 (145)
Q Consensus 110 ~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~ 140 (145)
..|...+-=+.--++++|..+|.+|...++.
T Consensus 45 ~lP~g~Rq~dQT~K~pTG~fdRe~Ll~~lek 75 (147)
T PF03250_consen 45 LLPAGMRQRDQTEKPPTGPFDREALLDYLEK 75 (147)
T ss_pred cCChhhhcccccCCCCCCCcCHHHHHHHHHH
Confidence 3666666667788899999999999987754
No 172
>cd04709 BAH_MTA BAH, or Bromo Adjacent Homology domain, as present in MTA1 and similar proteins. The Metastasis-associated protein MTA1 is part of the NURD (nucleosome remodeling and deacetylating) complex and plays a role in cellular transformation and metastasis. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the remodeling of chromatin. It is assumed that in most or all of these instances the BAH domain mediates protein-protein interactions.
Probab=22.21 E-value=91 Score=20.82 Aligned_cols=28 Identities=21% Similarity=0.548 Sum_probs=20.6
Q ss_pred eeecCceEEEcC-CCeEEEEeecCCeEEe
Q 038977 17 LLHTGDIGYVDH-DDEVFIVDRVKEIIKF 44 (145)
Q Consensus 17 ~~~TGDl~~~~~-~g~l~~~GR~d~~i~~ 44 (145)
.|+.||.+.+.. .+.-+.++|..++.+.
T Consensus 3 ~yrvGD~Vy~~~~~~~Py~I~rI~e~~~~ 31 (164)
T cd04709 3 MYRVGDYVYFESSPNNPYLIRRIEELNKT 31 (164)
T ss_pred EEecCCEEEEECCCCCCCEEEEEEEEEeC
Confidence 589999999953 3445778888776654
No 173
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=21.56 E-value=90 Score=13.36 Aligned_cols=17 Identities=18% Similarity=0.190 Sum_probs=12.7
Q ss_pred CCCCCCCcccHHHHHHH
Q 038977 121 IPKSPSGKILRKDLIAK 137 (145)
Q Consensus 121 ~p~t~~gK~~r~~l~~~ 137 (145)
+-...+|+|+..++++.
T Consensus 8 ~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 8 FDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HTTTSSSEEEHHHHHHH
T ss_pred HcCCCCCcCCHHHHHHH
Confidence 34567899998888764
No 174
>PRK10597 DNA damage-inducible protein I; Provisional
Probab=21.28 E-value=1.9e+02 Score=16.92 Aligned_cols=44 Identities=9% Similarity=0.012 Sum_probs=24.5
Q ss_pred HHHHHHHHhccccccCceEEEEe--ccCCCCCCCcccHHHHHHHHH
Q 038977 96 EAIKEYIAKQVVFYKRLHKVHFV--HAIPKSPSGKILRKDLIAKLA 139 (145)
Q Consensus 96 ~~l~~~l~~~l~~~~~p~~~~~v--~~~p~t~~gK~~r~~l~~~~~ 139 (145)
.+|.+.+..++|.......+..- +.+..+...|-++..+.+.+.
T Consensus 23 ~EL~kRl~~~fPd~~~~v~Vr~~s~n~lsv~g~~k~dK~~i~eiLq 68 (81)
T PRK10597 23 GELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKDRISEILQ 68 (81)
T ss_pred HHHHHHHHhhCCCCCccEEEeecCCCceEecCCCcchHHHHHHHHH
Confidence 56666666666665411223333 566665555667776665554
No 175
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=21.22 E-value=1e+02 Score=23.71 Aligned_cols=28 Identities=14% Similarity=0.513 Sum_probs=21.2
Q ss_pred eEEEEeecCCeEEeCcEEeChHHHHHHHhcC
Q 038977 31 EVFIVDRVKEIIKFKGFQVPPAEIEALLLSH 61 (145)
Q Consensus 31 ~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~ 61 (145)
++|++|++. +|+++|.+| +.|.-+...+
T Consensus 103 NIyYlG~ag-Vv~~~gvRI--ggiSGI~k~~ 130 (456)
T KOG2863|consen 103 NIYYLGYAG-VVNFGGVRI--GGISGIYKEH 130 (456)
T ss_pred ceEEeeecc-eEEECCEEE--eeccchhhhh
Confidence 589999976 999999998 4455555443
No 176
>PF04658 TAFII55_N: TAFII55 protein conserved region; InterPro: IPR006751 The general transcription factor, TFIID, consists of the TATA-binding protein (TBP) associated with a series of TBP-associated factors (TAFs) that together participate in the assembly of the transcription preinitiation complex. TAFII55 binds to TAFII250 and inhibits its acetyltransferase activity. The exact role of TAFII55 is currently unknown. The conserved region is situated towards the N-terminal of the protein [].; GO: 0006367 transcription initiation from RNA polymerase II promoter, 0005669 transcription factor TFIID complex
Probab=21.00 E-value=47 Score=22.12 Aligned_cols=18 Identities=28% Similarity=0.433 Sum_probs=14.0
Q ss_pred hcccCCCCeeecCceEEE
Q 038977 9 AATIDVEGLLHTGDIGYV 26 (145)
Q Consensus 9 ~~~~~~~~~~~TGDl~~~ 26 (145)
.+.++...||.|+|++.+
T Consensus 66 ~KT~D~k~~yKtaDI~QM 83 (162)
T PF04658_consen 66 HKTLDKKNFYKTADISQM 83 (162)
T ss_pred EeecccCeEEEEecccee
Confidence 344566679999999998
No 177
>PF02107 FlgH: Flagellar L-ring protein; InterPro: IPR000527 The flgH, flgI and fliF genes of Salmonella typhimurium encode the major proteins for the L, P and M rings of the flagellar basal body []. In fact, the basal body consists of four rings (L,P,S and M) surrounding the flagellar rod, which is believed to transmit motor rotation to the filament []. The M ring is integral to the inner membrane of the cell, and may be connected to the rod via the S (supramembrane) ring, which lies just distal to it. The L and P rings reside in the outer membrane and periplasmic space, respectively. FlgH and FlgI, which are exported across the cell membrane to their destinations in the outer membrane and periplasmic space, have typical N-terminal cleaved signal-peptide sequences. FlgH is predicted to have an extensive beta-sheet structure, in keeping with other outer membrane proteins [].; GO: 0003774 motor activity, 0001539 ciliary or flagellar motility, 0009427 bacterial-type flagellum basal body, distal rod, L ring
Probab=20.75 E-value=1.5e+02 Score=19.95 Aligned_cols=27 Identities=19% Similarity=0.171 Sum_probs=19.5
Q ss_pred ecCceEEEcCCCeEEEEeecCCeEEeCcE
Q 038977 19 HTGDIGYVDHDDEVFIVDRVKEIIKFKGF 47 (145)
Q Consensus 19 ~TGDl~~~~~~g~l~~~GR~d~~i~~~G~ 47 (145)
.|.-.....++|.|.+.|++. |.++++
T Consensus 96 ita~Vv~VlpNGnL~I~G~k~--i~vn~e 122 (179)
T PF02107_consen 96 ITARVVEVLPNGNLVIEGEKQ--IRVNGE 122 (179)
T ss_pred EEEEEEEECCCCcEEEEEEEE--EEECCC
Confidence 344556668999999999876 566444
No 178
>cd08047 TAF7 TATA Binding Protein (TBP) Associated Factor 7 (TAF7) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex. The TATA Binding Protein (TBP) Associated Factor 7 (TAF7) is one of several TAFs that bind TBP and are involved in forming the Transcription Factor IID (TFIID) complex. TFIID is one of seven General Transcription Factors (GTF) (TFIIA, TFIIB, TFIID, TFIIE, TFIIF, and TFIID) that are involved in accurate initiation of transcription by RNA polymerase II in eukaryotes. TFIID plays an important role in the recognition of promoter DNA and assembly of the preinitiation complex. TFIID complex is composed of the TBP and at least 13 TAFs. TAFs are named after their electrophoretic mobility in polyacrylamide gels in different species. A new, unified nomenclature has been suggested for the pol II TAFs to show the relationship between TAF orthologs and paralogs. Several hypotheses are proposed for TAFs functions such as serving
Probab=20.71 E-value=46 Score=22.05 Aligned_cols=18 Identities=33% Similarity=0.469 Sum_probs=14.2
Q ss_pred hcccCCCCeeecCceEEE
Q 038977 9 AATIDVEGLLHTGDIGYV 26 (145)
Q Consensus 9 ~~~~~~~~~~~TGDl~~~ 26 (145)
.+.++...||.|.|++.+
T Consensus 64 ~KT~D~k~~yKtaDI~QM 81 (162)
T cd08047 64 HKTLDKKNLYKTADISQM 81 (162)
T ss_pred eeccccCceEEecChhhE
Confidence 344566779999999998
No 179
>PRK14588 tRNA pseudouridine synthase ACD; Provisional
Probab=20.68 E-value=3.4e+02 Score=19.69 Aligned_cols=63 Identities=10% Similarity=-0.034 Sum_probs=33.5
Q ss_pred HHHHHHHhcCCCcceEEEEeecCCCCC--c--eeEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEe
Q 038977 52 AEIEALLLSHPSIADATVVPQKDEVAG--E--VPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFV 118 (145)
Q Consensus 52 ~~ie~~l~~~~~v~~~~~~~~~~~~~~--~--~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v 118 (145)
..||.+|.++.. .++.+++..+...| + .++.+ ... ...+...+...|++.||..-....+..|
T Consensus 29 ~~Le~aL~~l~~-~~i~i~~AgRTDaGVHA~gQv~~f-~~~--~~~~~~~l~~~LN~~LP~dI~V~~v~~v 95 (272)
T PRK14588 29 GALEAAWQALTQ-ERRRIVLAGRTDAGVHARGQVAHV-QTD--TRHSLATIWRGLNAHLPEDIGVQNAWEA 95 (272)
T ss_pred HHHHHHHHHhhC-CCceEEEecCCCcCcCccccEEEE-EcC--CCCCHHHHHHHHHhcCCCCeEEEEEEEC
Confidence 467777776632 34445555444333 1 22222 222 2245678899999988765444444433
No 180
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=20.55 E-value=1.5e+02 Score=20.40 Aligned_cols=64 Identities=16% Similarity=0.090 Sum_probs=33.0
Q ss_pred EEeChHHHHHHHhcCCC------cceEEEEeecCCCCCceeEEEEEeCCCCccCHHHHHHHHHhccccccCce
Q 038977 47 FQVPPAEIEALLLSHPS------IADATVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLH 113 (145)
Q Consensus 47 ~~v~~~~ie~~l~~~~~------v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~ 113 (145)
+.|+..+|++.|..-+. |.+.+.+..+-...|..-. .+...--..-+...+.++..+..+++|+
T Consensus 47 hwiSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~---sPgs~DyLknq~FW~~vn~g~D~~SIPK 116 (237)
T COG3700 47 HWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYF---SPGSEDYLKNQVFWEKVNNGWDEFSIPK 116 (237)
T ss_pred eEEEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCcccc---CCChHHhhcCHHHHHHHhcCCccccchH
Confidence 47888999999987655 3345555444333332211 1100000112455666666666666664
No 181
>PHA02885 putative interleukin binding protein; Provisional
Probab=20.19 E-value=61 Score=19.90 Aligned_cols=39 Identities=15% Similarity=0.192 Sum_probs=26.6
Q ss_pred CCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHH
Q 038977 15 EGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALL 58 (145)
Q Consensus 15 ~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l 58 (145)
++..+||=+-. +||++|.+|.... .-|+.++++.+|.+.
T Consensus 48 ~rllcs~~lns--edgyiywi~pnnt---spgeyif~enl~g~~ 86 (135)
T PHA02885 48 DRLLCSGCLNS--EDGYIYWIGPNNT---SPGEYIFIENLEGAN 86 (135)
T ss_pred hhheeeeeecC--CCceEEEEeCCCC---CCcceeeeecccccc
Confidence 56677775544 7899999987542 267788777666543
Done!