Query 038977
Match_columns 145
No_of_seqs 106 out of 1096
Neff 10.0
Searched_HMMs 13730
Date Mon Mar 25 08:10:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038977.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/038977hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ry2a_ e.23.1.1 (A:) Acetyl-C 100.0 2E-34 1.5E-38 222.6 11.1 141 1-141 463-615 (640)
2 d3cw9a1 e.23.1.1 (A:1-503) 4-c 100.0 2E-33 1.5E-37 209.4 15.7 137 1-138 365-502 (503)
3 d1pg4a_ e.23.1.1 (A:) Acetyl-C 100.0 2.2E-33 1.6E-37 217.4 15.6 141 1-141 473-618 (643)
4 d1lcia_ e.23.1.1 (A:) Lucifera 100.0 2E-33 1.4E-37 212.1 14.8 142 1-142 398-540 (541)
5 d1v25a_ e.23.1.1 (A:) Long cha 100.0 5.6E-34 4E-38 215.5 6.2 141 1-141 390-530 (534)
6 d1mdba_ e.23.1.1 (A:) Dihydrox 100.0 3.2E-32 2.3E-36 205.1 15.0 141 1-142 392-533 (536)
7 d1amua_ e.23.1.1 (A:) Phenylal 100.0 2.1E-32 1.5E-36 205.6 12.3 134 1-136 370-509 (514)
8 d2cqaa1 b.40.4.14 (A:8-89) Ruv 58.1 4.7 0.00034 21.4 2.8 23 18-40 56-79 (82)
9 d2hiya1 d.356.1.1 (A:1-180) Hy 56.5 4.1 0.0003 25.0 2.8 34 41-75 10-44 (180)
10 d1jiwi_ b.61.2.1 (I:) Metallop 52.4 9 0.00065 21.3 3.5 29 13-41 57-87 (105)
11 d2cvba1 c.47.1.10 (A:2-188) Pr 51.2 5 0.00037 24.5 2.6 43 17-60 113-155 (187)
12 d1p6ta1 d.58.17.1 (A:1-72) Pot 45.8 16 0.0011 18.2 5.3 55 42-104 10-66 (72)
13 d1cpza_ d.58.17.1 (A:) Copper 42.8 17 0.0013 17.8 5.3 46 51-104 15-60 (68)
14 d2aw0a_ d.58.17.1 (A:) Menkes 40.0 20 0.0015 17.8 5.4 46 51-104 18-63 (72)
15 d1lk5a2 d.58.40.1 (A:131-210) 39.0 14 0.001 19.3 2.8 40 24-70 40-79 (80)
16 d2qifa1 d.58.17.1 (A:1-69) Cop 37.6 22 0.0016 17.5 5.3 46 51-104 17-62 (69)
17 d1iwga3 d.58.44.1 (A:567-673) 36.6 29 0.0021 18.6 6.4 85 29-113 3-96 (107)
18 d1f06a2 d.81.1.3 (A:119-268) D 35.6 39 0.0028 19.8 5.1 62 54-119 34-113 (150)
19 d1osda_ d.58.17.1 (A:) Mercuri 29.5 32 0.0023 17.0 4.9 54 43-104 8-63 (72)
20 d1kvja_ d.58.17.1 (A:) Menkes 26.0 40 0.0029 16.9 5.6 55 42-104 12-68 (79)
21 d1o8ba2 d.58.40.1 (A:127-198) 25.9 22 0.0016 18.0 2.1 38 25-69 34-71 (72)
22 d2bz2a1 d.58.7.1 (A:35-113) Ne 25.4 36 0.0026 16.9 3.1 41 41-88 7-47 (79)
23 d2idba2 d.333.1.1 (A:326-491) 25.4 63 0.0046 19.0 5.4 56 61-120 23-78 (166)
24 d2dara1 g.39.1.3 (A:53-84) PDZ 21.3 12 0.0009 15.8 0.4 13 21-33 10-22 (32)
No 1
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=2e-34 Score=222.64 Aligned_cols=141 Identities=28% Similarity=0.426 Sum_probs=125.1
Q ss_pred CCCChhhhhccc--CCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCC
Q 038977 1 YLNDPEATAATI--DVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAG 78 (145)
Q Consensus 1 Y~~~~~~t~~~~--~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~ 78 (145)
||++++.|.+.| +.+|||+|||+|++|++|+++++||+||+||++|++|+|.+||+.|.++|.|.++++++.++...+
T Consensus 463 y~~~~e~t~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~~I~p~eIE~~l~~~p~V~~a~Vvg~~d~~~g 542 (640)
T d1ry2a_ 463 IWKNHDRYLDTYLNPYPGYYFTGDGAAKDKDGYIWILGRVDDVVNVSGHRLSTAEIEAAIIEDPIVAECAVVGFNDDLTG 542 (640)
T ss_dssp ETTCHHHHHHHHTSSSTTSEEEEEEEEECTTCCEEECSCTTSCBCSSSCCBCHHHHHHHHHSSTTEEEEEEECCCCCTTS
T ss_pred cccCHHHHHhhhccCCCCeEEcCCceeECCCCCEEEEEcCCCEEEECCEEECHHHHHHHHHhCCCccEEEEEEEECCCCC
Confidence 899999998887 456999999999999999999999999999999999999999999999999999999999999889
Q ss_pred ceeEEEEEeCCCCccC----------HHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 79 EVPVAFVVRSNGFELT----------EEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 79 ~~~~~~v~~~~~~~~~----------~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+.++++|++.++.... .+++.+.++++|+.+++|+.++++++||+|++||++|++|++++..+
T Consensus 543 e~~~a~Vv~~~~~~~~~~~~~~~~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~ 615 (640)
T d1ry2a_ 543 QAVAAFVVLKNKSSWSTATDDELQDIKKHLVFTVRKDIGPFAAPKLIILVDDLPKTRSGKIMRRILRKILAGE 615 (640)
T ss_dssp CCCEEEEEEC------------CCSHHHHHHHHHHHHTCTTTSCSEEEECSCCCBCTTSCBCHHHHHHSCC--
T ss_pred eEEEEEEEEcCCCCccccchHHHHHHHHHHHHHHHhhCCCCCCceEEEEeCCCCCCCCcCccHHHHHHHHhCC
Confidence 9999999887764322 25688889999999999999999999999999999999999987543
No 2
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]}
Probab=100.00 E-value=2e-33 Score=209.37 Aligned_cols=137 Identities=28% Similarity=0.499 Sum_probs=128.9
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||+++..|.+.|. +|||+|||+|+++++|.++++||+||+||++|.+|+|.+||+.+.++|+|.++++++.++...++.
T Consensus 365 ~~~~~~~t~~~~~-~g~~~TgD~g~~~~dG~l~~~GR~~d~ik~~G~~v~~~~IE~~l~~~p~V~~~~v~~~~~~~~g~~ 443 (503)
T d3cw9a1 365 YLNQPQATAEKLQ-DGWYRTSDVAVWTPEGTVRILGRVDDMIISGGENIHPSEIERVLGTAPGVTEVVVIGLADQRWGQS 443 (503)
T ss_dssp BTTCHHHHHHHEE-TTEEEEEEEEEECTTSCEEEEEESSCCEEETTEEECHHHHHHHHTTSTTEEEEEEEEEEETTTEEE
T ss_pred ccCChhhhHHHhc-CCceecccccccccCCeEEeCCCcCCeEEECCEEECHHHHHHHHHhCCCccEEEEEEEECCCCCeE
Confidence 6889999999995 899999999999999999999999999999999999999999999999999999999998888888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHH-hccccccCceEEEEeccCCCCCCCcccHHHHHHHH
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIA-KQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKL 138 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~-~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~ 138 (145)
+++++++..+...+.+++.+.++ ++++.+++|..++++++||+|++||++|++|++++
T Consensus 444 ~~a~v~~~~~~~~~~~~l~~~~~~~~l~~~~~P~~i~~v~~~P~t~~GKi~R~~L~~~~ 502 (503)
T d3cw9a1 444 VTACVVPRLGETLSADALDTFCRSSELADFKRPKRYFILDQLPKNALNKVLRRQLVQQV 502 (503)
T ss_dssp EEEEEEECTTCCCCHHHHHHHHHHSSSCGGGSCSEEEECSCCCBCTTSCBCHHHHHHHH
T ss_pred EEEEEEeCCCCCCCHHHHHHHHHhcCCCCCCCccEEEEECCCCcCCCcCccHHHHHHhc
Confidence 99999998888888899999994 67999999999999999999999999999999876
No 3
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]}
Probab=100.00 E-value=2.2e-33 Score=217.38 Aligned_cols=141 Identities=28% Similarity=0.453 Sum_probs=130.2
Q ss_pred CCCChhhhhccc--CCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCC
Q 038977 1 YLNDPEATAATI--DVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAG 78 (145)
Q Consensus 1 Y~~~~~~t~~~~--~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~ 78 (145)
||++++.+.+.+ ..+|||+|||++++|++|.++++||+||+||++|.+|+|.+||+.|.++|.|.++++++.++...+
T Consensus 473 ~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~ik~~G~ri~p~eIE~~l~~~p~V~eaaVvg~~d~~~g 552 (643)
T d1pg4a_ 473 LFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKG 552 (643)
T ss_dssp ETTCHHHHHHHHHSSSTTSEEEEEEEEECTTSCEEEEEESSSEEEETTEEEEHHHHHHHHHHSTTEEEEEEEEEEETTTE
T ss_pred ccCChhhchhhhcccCCCeEEcCCEEEECCCceEEEecccccEEEECCEEECHHHHHHHHHhCCCcceEEEEEEECCCCC
Confidence 789998877665 458999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceeEEEEEeCCCCccCH---HHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 79 EVPVAFVVRSNGFELTE---EAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 79 ~~~~~~v~~~~~~~~~~---~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+.++++|++..+...+. .++.++++++|+++++|+.++++++||+|++||++|+.|+++++.+
T Consensus 553 e~~~a~Vv~~~~~~~~~~~~~~i~~~~~~~L~~~~vP~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~ 618 (643)
T d1pg4a_ 553 QAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGD 618 (643)
T ss_dssp EEEEEEEEECTTCCCCHHHHHHHHHHHHHHTCGGGCCSEEEECSCCCBCTTSCBCHHHHHHHHHTC
T ss_pred eEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCcccCccEEEEECCCCCCCCcCccHHHHHHHhcCC
Confidence 99999999988776664 4789999999999999999999999999999999999999998654
No 4
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]}
Probab=100.00 E-value=2e-33 Score=212.12 Aligned_cols=142 Identities=47% Similarity=0.742 Sum_probs=123.1
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.+...+..+|||+|||+++++++|.+++.||.||+||++|++|+|.+||+.|.++|.|.++++++.++...++.
T Consensus 398 Y~~~~~~~~~~~~~~~~~~TGDl~~~~~~G~~~~~GR~~d~i~~~G~~v~~~~IE~~l~~~p~V~~~~v~~~~~~~~g~~ 477 (541)
T d1lcia_ 398 YVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAELESILLQHPNIFDAGVAGLPDDDAGEL 477 (541)
T ss_dssp ETTBHHHHHHHBCTTSCEEEEEEEEECTTCCEEEC-----CEEETTEEECHHHHHHHHHTSTTEEEEEEEEEEETTTEEE
T ss_pred eCCChhhhhhcccCCccccCCCeeEEcCCeEEEEeeeecCEEEECCEEECHHHHHHHHHhCCCccEEEEEEEECCCCCEE
Confidence 89999999999988999999999999999999999999999999999999999999999999999999999988888889
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhcccccc-CceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYK-RLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~-~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
+++++++.++...+.+++.+++++++.++. .|..++++++||+|++||++|++|++++.++.
T Consensus 478 ~~a~v~~~~~~~~~~~~l~~~~~~~l~~~~~~p~~i~~v~~lP~t~~GKi~r~~l~~~~~~~~ 540 (541)
T d1lcia_ 478 PAAVVVLEHGKTMTEKEIVDYVASQVTTAKKLRGGVVFVDEVPKGLTGKLDARKIREILIKAK 540 (541)
T ss_dssp EEEEEEECTTCCCCHHHHHHHHHHHSCGGGSCTTEEEEESSCCC-----CCHHHHHHHHHHHT
T ss_pred EEEEEEECCCCCCCHHHHHHHHHHhCCccccCCcEEEEeCCCCcCCCcCccHHHHHHHHHHhC
Confidence 999999988888888999999999988775 68899999999999999999999999998753
No 5
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=5.6e-34 Score=215.45 Aligned_cols=141 Identities=28% Similarity=0.425 Sum_probs=93.5
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||++++.|.+.|..+|||+|||+++++++|.+++.||+|++||++|.+|+|.+||+.|.++|.|.++++++.++...++.
T Consensus 390 Y~~~~~~t~~~~~~dg~~~TGDlg~~~~~G~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~V~~a~v~~~~~~~~~~~ 469 (534)
T d1v25a_ 390 YYGNEEATRSALTPDGFFRTGDIAVWDEEGYVEIKDRLKDLIKSGGEWISSVDLENALMGHPKVKEAAVVAIPHPKWQER 469 (534)
T ss_dssp CBTCHHHHHTTBCTTSCEEEEEEEEECTTCCEEEEEESSCEEEETTEEEEHHHHHCC----------CEEEEECSSSSEE
T ss_pred ecCChhhhhhhcccCCCCccCceeEECCCccEEEecccccEEEECCEEECHHHHHHHHHhCCCcceEEEEEEECCCCCeE
Confidence 99999999999988999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHHHHHcc
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASS 141 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~ 141 (145)
+++++++........+.+...+++.++.+++|..+++++++|+|++||++|++|+++|.+-
T Consensus 470 l~a~vv~~~~~~~~~~~~~~~~~~~l~~~~~P~~i~~~~~lP~t~~GKi~R~~lr~~~~~~ 530 (534)
T d1v25a_ 470 PLAVVVPRGEKPTPEELNEHLLKAGFAKWQLPDAYVFAEEIPRTSAGKFLKRALREQYKNY 530 (534)
T ss_dssp EEECC-------------------CCCTTTSCSBC--------------CCTTHHHHSTTS
T ss_pred EEEEEEeCCCCCCHHHHHHHHHHhcCCcCCCccEEEEECCCCCCCCccccHHHHHHHHHhh
Confidence 8888877654333333334447778999999999999999999999999999999998753
No 6
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]}
Probab=99.98 E-value=3.2e-32 Score=205.10 Aligned_cols=141 Identities=28% Similarity=0.504 Sum_probs=131.0
Q ss_pred CCCChhhhhcccCCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCce
Q 038977 1 YLNDPEATAATIDVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEV 80 (145)
Q Consensus 1 Y~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~ 80 (145)
||+++..+...+..+|||+|||++++++||.+++.||+||++|++|.+|+|.+||+.|.++|+|.++++++.++...++.
T Consensus 392 Y~~~~~~~~~~~~~~~~~~tGD~~~~~~dG~l~~~GR~~d~i~~~G~~i~p~~IE~~l~~~p~V~~a~vvg~~~~~~g~~ 471 (536)
T d1mdba_ 392 YYKAEEHNAASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQINRGGEKVAAEEVENHLLAHPAVHDAAMVSMPDQFLGER 471 (536)
T ss_dssp CTTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEEGGGCEECSSCEECHHHHHHHHTTSTTEEEEEEEEEEETTTEEE
T ss_pred cccccccccccccccCccccCccccccCCCceecCCCcceEEEECCEEECHHHHHHHHHhCCCccEEEEEEEEcCCCCeE
Confidence 89999999999998999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred eEEEEEeCCCCccCHHHHHHHHHhc-cccccCceEEEEeccCCCCCCCcccHHHHHHHHHccC
Q 038977 81 PVAFVVRSNGFELTEEAIKEYIAKQ-VVFYKRLHKVHFVHAIPKSPSGKILRKDLIAKLASSM 142 (145)
Q Consensus 81 ~~~~v~~~~~~~~~~~~l~~~l~~~-l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~~~~~~~ 142 (145)
+++++++.++ ..+..++.+.++++ ++.+++|..++++++||+|++||++|++|++++.+++
T Consensus 472 ~~a~v~~~~~-~~~~~~l~~~l~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~l 533 (536)
T d1mdba_ 472 SCVFIIPRDE-APKAAELKAFLRERGLAAYKIPDRVEFVESFPQTGVGKVSKKALREAISEKL 533 (536)
T ss_dssp EEEEEEESSS-CCCHHHHHHHHHHTTCCGGGSCSEEEECSSCCBCTTSCBCHHHHHHHHHHHH
T ss_pred EEEEEEECCC-CCCHHHHHHHHHhcCCCcCcCccEEEEECCCCcCCCcCccHHHHHHHHHHHH
Confidence 8888887654 45678899999875 9999999999999999999999999999999997654
No 7
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]}
Probab=99.98 E-value=2.1e-32 Score=205.63 Aligned_cols=134 Identities=25% Similarity=0.377 Sum_probs=125.2
Q ss_pred CCCChhhhhccc------CCCCeeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEEeecC
Q 038977 1 YLNDPEATAATI------DVEGLLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVVPQKD 74 (145)
Q Consensus 1 Y~~~~~~t~~~~------~~~~~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~ 74 (145)
||+++..+...| +++|||+|||+|++|++|.+++.||++|+|+++|++|+|.+||+.|.++++|.++++++.++
T Consensus 370 Y~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~l~i~GR~~d~i~~~G~~i~p~~IE~~l~~~~~V~~~~V~~~~~ 449 (514)
T d1amua_ 370 YWKRPELTSQKFVDNPFVPGEKLYKTGDQARWLSDGNIEYLGRIDNQVKIRGHRVELEEVESILLKHMYISETAVSVHKD 449 (514)
T ss_dssp ETTCHHHHHHHEEECSSSTTSEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEEEHHHHHHHHTTSTTEEEEEEEEEEC
T ss_pred ccccccccceeeEeccccCCCceEEECCEEEECCCCcEEEEecccCEEEECCEEECHHHHHHHHHhCCCccEEEEEEEEC
Confidence 899999988887 45789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEeccCCCCCCCcccHHHHHH
Q 038977 75 EVAGEVPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHAIPKSPSGKILRKDLIA 136 (145)
Q Consensus 75 ~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~~p~t~~gK~~r~~l~~ 136 (145)
...++.+++++++.++ .+.+++.+.++++|+.+++|..++++++||+|++||++|++|++
T Consensus 450 ~~~g~~~~a~v~~~~~--~~~~~l~~~~~~~l~~~~~p~~i~~v~~lP~t~~GKi~R~~L~~ 509 (514)
T d1amua_ 450 HQEQPYLCAYFVSEKH--IPLEQLRQFSSEELPTYMIPSYFIQLDKMPLTSNGKIDRKQLPE 509 (514)
T ss_dssp TTSCEEEEEEEEESSC--CCHHHHHHHHHHHSCGGGSCSEEEECSSCCBCTTSSBCGGGSCC
T ss_pred CCCCEEEEEEEEcCCC--CCHHHHHHHHHhhCCcccCceEEEEeCCCCCCCCcChhHHhcCC
Confidence 8888899988888765 56788999999999999999999999999999999999999875
No 8
>d2cqaa1 b.40.4.14 (A:8-89) RuvB-like 2 protein, RUVBL2 (TIP49b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.12 E-value=4.7 Score=21.44 Aligned_cols=23 Identities=17% Similarity=0.312 Sum_probs=19.6
Q ss_pred eecCceEEEcCC-CeEEEEeecCC
Q 038977 18 LHTGDIGYVDHD-DEVFIVDRVKE 40 (145)
Q Consensus 18 ~~TGDl~~~~~~-g~l~~~GR~d~ 40 (145)
..-||..++|.+ |.++=+||++.
T Consensus 56 V~~GDVI~ID~~sG~V~klGRs~~ 79 (82)
T d2cqaa1 56 VQAGDVITIDKATGKISKLGRSFT 79 (82)
T ss_dssp CCTTSEEEEETTTTEEEEEECCCC
T ss_pred CCcCCEEEEECCCcEEEEeeecce
Confidence 467999999876 89999999874
No 9
>d2hiya1 d.356.1.1 (A:1-180) Hypothetical protein SP0830 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=56.55 E-value=4.1 Score=25.01 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=26.0
Q ss_pred eEEeCcEE-eChHHHHHHHhcCCCcceEEEEeecCC
Q 038977 41 IIKFKGFQ-VPPAEIEALLLSHPSIADATVVPQKDE 75 (145)
Q Consensus 41 ~i~~~G~~-v~~~~ie~~l~~~~~v~~~~~~~~~~~ 75 (145)
-|+++|.+ |...++...+.+. +..++..+.++-+
T Consensus 10 GINVGG~nkv~Ma~Lr~~l~~l-Gf~~V~TyiqSGN 44 (180)
T d2hiya1 10 GINVGGKNKVVMAELRQELTNL-GLEKVESYINSGN 44 (180)
T ss_dssp SCSCC-CCCCCHHHHHHHHHHH-TCEEEEEETTTTE
T ss_pred eeecCCCCcccHHHHHHHHHHc-CCccceeeeccCc
Confidence 47888885 9999999999988 5678777766544
No 10
>d1jiwi_ b.61.2.1 (I:) Metalloprotease inhibitor {Pseudomonas aeruginosa, aprin [TaxId: 287]}
Probab=52.37 E-value=9 Score=21.25 Aligned_cols=29 Identities=10% Similarity=-0.009 Sum_probs=22.9
Q ss_pred CCCCeeecCceEEE-cCCCe-EEEEeecCCe
Q 038977 13 DVEGLLHTGDIGYV-DHDDE-VFIVDRVKEI 41 (145)
Q Consensus 13 ~~~~~~~TGDl~~~-~~~g~-l~~~GR~d~~ 41 (145)
...+|+-|+|-..+ +.+|. +.+..|.++-
T Consensus 57 ~p~~W~p~pdgi~L~~a~Gs~l~ff~r~~~g 87 (105)
T d1jiwi_ 57 EPRAWRPTPAGIALLERGGLTLMLLGRQGEG 87 (105)
T ss_dssp CCCEEEEETTEEEEECTTSCEEEEEEEEETT
T ss_pred CCceEeecCCEEEEEcCCCCEEEEeecccCC
Confidence 45689999998886 66775 7888888764
No 11
>d2cvba1 c.47.1.10 (A:2-188) Probable thiol-disulfide isomerase/thioredoxin TTHA0593 {Thermus thermophilus [TaxId: 274]}
Probab=51.15 E-value=5 Score=24.48 Aligned_cols=43 Identities=21% Similarity=0.187 Sum_probs=29.6
Q ss_pred eeecCceEEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhc
Q 038977 17 LLHTGDIGYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLS 60 (145)
Q Consensus 17 ~~~TGDl~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~ 60 (145)
-..|-...-+|++|.+.+.||.||.-. +...+.-.+|+++|.+
T Consensus 113 v~~~P~~~liD~~G~i~y~G~idd~~~-~~~~~~~~~L~~Ai~~ 155 (187)
T d2cvba1 113 ALRTPEVFLFDERRLLRYHGRVNDNPK-DPSKVQSHDLEAAIEA 155 (187)
T ss_dssp CCEESEEEEECTTCBEEEEECSSSCTT-CGGGCCCCHHHHHHHH
T ss_pred ccceeeEEEEcCCCeEEEEeeecCCCC-CCCCCCHHHHHHHHHH
Confidence 456777888999999999999998632 2223444456665554
No 12
>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}
Probab=45.84 E-value=16 Score=18.21 Aligned_cols=55 Identities=29% Similarity=0.343 Sum_probs=35.3
Q ss_pred EEeCcEEeC--hHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCccCHHHHHHHHHh
Q 038977 42 IKFKGFQVP--PAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAK 104 (145)
Q Consensus 42 i~~~G~~v~--~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~ 104 (145)
+++.|-.-. ...||+.|.+.++|.++.+-..... +.+...+ ...+..++.+.+.+
T Consensus 10 l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~-------~~v~~d~-~~~~~~~i~~~i~~ 66 (72)
T d1p6ta1 10 MQVSGMTCAACAARIEKGLKRMPGVTDANVNLATET-------VNVIYDP-AETGTAAIQEKIEK 66 (72)
T ss_dssp EEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTE-------EEEEECT-TTSCHHHHHHHHHH
T ss_pred EEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCE-------EEEEECC-CCCCHHHHHHHHHH
Confidence 344443332 6789999999999998887644332 2333333 23567788887765
No 13
>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}
Probab=42.79 E-value=17 Score=17.84 Aligned_cols=46 Identities=20% Similarity=0.169 Sum_probs=31.0
Q ss_pred hHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCccCHHHHHHHHHh
Q 038977 51 PAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAK 104 (145)
Q Consensus 51 ~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~ 104 (145)
...||+.|.+.++|..+.+-..... +.+...+ ...+..++.+.+.+
T Consensus 15 ~~~Ie~~l~~~~GV~~v~V~~~~~~-------v~v~~d~-~~~~~~~i~~~i~~ 60 (68)
T d1cpza_ 15 VARIEEAVGRISGVKKVKVQLKKEK-------AVVKFDE-ANVQATEICQAINE 60 (68)
T ss_dssp HHHHHHHHHTSTTEEEEEEETTTTE-------EEEEECT-TTCCHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCcEEEEEECCCCE-------EEEEECC-CCCCHHHHHHHHHh
Confidence 5789999999999998877533222 2233333 34567888888876
No 14
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.97 E-value=20 Score=17.76 Aligned_cols=46 Identities=15% Similarity=0.216 Sum_probs=30.5
Q ss_pred hHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCccCHHHHHHHHHh
Q 038977 51 PAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAK 104 (145)
Q Consensus 51 ~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~ 104 (145)
...||..|.+.++|..+.+-..... +.+...+ ...+..++.+.+.+
T Consensus 18 ~~~Ie~~l~~~~GV~~v~v~~~~~~-------v~v~~d~-~~~~~~~i~~~i~~ 63 (72)
T d2aw0a_ 18 VQSIEGVISKKPGVKSIRVSLANSN-------GTVEYDP-LLTSPETLRGAIED 63 (72)
T ss_dssp HHHHHHHHHTSTTCCCEEEETTTTE-------EEEEECT-TTCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCcEEEEEECCCCE-------EEEEECC-CCCCHHHHHHHHHh
Confidence 5789999999999999877533222 2333332 34567788887766
No 15
>d1lk5a2 d.58.40.1 (A:131-210) D-ribose-5-phosphate isomerase (RpiA), lid domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=38.97 E-value=14 Score=19.27 Aligned_cols=40 Identities=13% Similarity=0.211 Sum_probs=28.1
Q ss_pred EEEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEEE
Q 038977 24 GYVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATVV 70 (145)
Q Consensus 24 ~~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~ 70 (145)
..++++|++-+.-.- +.--.|..++..|...|+|.+..++
T Consensus 40 p~iTDnGN~I~D~~~-------~~i~~p~~l~~~L~~ipGVVe~GLF 79 (80)
T d1lk5a2 40 PVITDNGNFIIDAKF-------PRIDDPLDMEIELNTIPGVIENGIF 79 (80)
T ss_dssp BCCCTTSCEEEEEEC-------SCCSCHHHHHHHHHTSTTEEEESEE
T ss_pred CeEecCCCEEEECCC-------CCCCCHHHHHHHHHCCCCEEeeCcc
Confidence 345666766654443 2334689999999999999887665
No 16
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=37.56 E-value=22 Score=17.46 Aligned_cols=46 Identities=11% Similarity=0.026 Sum_probs=30.5
Q ss_pred hHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCccCHHHHHHHHHh
Q 038977 51 PAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAK 104 (145)
Q Consensus 51 ~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~ 104 (145)
...||..|..+++|.++.+-.... . +.+...+ ...+.+++.+.+.+
T Consensus 17 ~~~Ie~~l~~~~GV~~v~v~~~~~-----~--v~v~~d~-~~~~~~~i~~~i~~ 62 (69)
T d2qifa1 17 VKAVETSVGELDGVSAVHVNLEAG-----K--VDVSFDA-DKVSVKDIADAIED 62 (69)
T ss_dssp HHHHHHHHHTSTTEEEEEEETTTT-----E--EEEEECT-TTCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCceEEEEECCCC-----E--EEEEECC-CCCCHHHHHHHHHH
Confidence 568999999999999887743322 2 2333333 23567788887776
No 17
>d1iwga3 d.58.44.1 (A:567-673) Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains {Escherichia coli [TaxId: 562]}
Probab=36.55 E-value=29 Score=18.60 Aligned_cols=85 Identities=14% Similarity=0.037 Sum_probs=46.5
Q ss_pred CCeEEEEeecCCeEEeCcEEeChHHHHHHHh--cCCCcceEEEEeecCCCCC--ceeEEEEEeCC--C---CccCHHHHH
Q 038977 29 DDEVFIVDRVKEIIKFKGFQVPPAEIEALLL--SHPSIADATVVPQKDEVAG--EVPVAFVVRSN--G---FELTEEAIK 99 (145)
Q Consensus 29 ~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~--~~~~v~~~~~~~~~~~~~~--~~~~~~v~~~~--~---~~~~~~~l~ 99 (145)
.|.+.+.....+-..+.-..=....|++.+. ..+.+..++.+.-...... ..-..++.+.+ . ...+..++.
T Consensus 3 qG~~~v~~~~P~Gasl~~t~~~~~~v~~~l~~~~~~~v~~~~~~~G~~~~~~~~n~~~~~v~Lkpw~eR~~~~~s~~~i~ 82 (107)
T d1iwga3 3 QGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNGFGFAGRGQNTGIAFVSLKDWADRPGEENKVEAIT 82 (107)
T ss_dssp CSCEEEEEECCSSCCHHHHHHHHHHHHHHHHHTTTTTEEEEEEEEEECSSCEEEEEEEEEEEECCGGGCCSTTSSHHHHH
T ss_pred ceEEEEEEECCCCcCHHHHHHHHHHHHHHhhccCCCCeEEEEEEeccCCCCCCccceeeeeecccchhccccccCHHHHH
Confidence 4666666666655555444444567888774 4577777665443322211 13344555543 1 233556777
Q ss_pred HHHHhccccccCce
Q 038977 100 EYIAKQVVFYKRLH 113 (145)
Q Consensus 100 ~~l~~~l~~~~~p~ 113 (145)
..+.+.+.......
T Consensus 83 ~~l~~~~~~i~~a~ 96 (107)
T d1iwga3 83 MRATRAFSQIKDAM 96 (107)
T ss_dssp HHHHHHHHHSCSSE
T ss_pred HHHHHHHcCCCCeE
Confidence 77777776544433
No 18
>d1f06a2 d.81.1.3 (A:119-268) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}
Probab=35.64 E-value=39 Score=19.81 Aligned_cols=62 Identities=19% Similarity=0.169 Sum_probs=39.4
Q ss_pred HHHHHhcCCCcceEEEEeecC----------------CCCCceeEEEEEeCCCCccCHHHHHHHHHhccccccCc--eEE
Q 038977 54 IEALLLSHPSIADATVVPQKD----------------EVAGEVPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRL--HKV 115 (145)
Q Consensus 54 ie~~l~~~~~v~~~~~~~~~~----------------~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p--~~~ 115 (145)
=.+++++.++|+++..+..+. ......-.|+|++ ++ ++.+++.+.+.. .|.|... ..+
T Consensus 34 HSdAir~i~GVkdA~qyTiP~~~al~~vr~ge~~~~t~~~~H~R~cyVv~-eg--Ad~~~v~~~Ik~-mP~YFa~ydT~V 109 (150)
T d1f06a2 34 HSDALRRIPGVQKAVQYTLPSEDALEKARRGEAGDLTGKQTHKRQCFVVA-DA--ADHERIENDIRT-MPDYFVGYEVEV 109 (150)
T ss_dssp HHHHHHTSTTCSEEEEEEEECHHHHHHHHHTCCTTCCHHHHEEEEEEEEC-CG--GGHHHHHHHHHT-CTTTTTTSEEEE
T ss_pred hHHHHHcCcchhcceeeecccHHHHHHhhcCCCcccccccceEEEEEEEe-cc--CCHHHHHHHHhc-CccccCCCCcEE
Confidence 356689999999999888773 1111244677766 33 677888888876 4444333 355
Q ss_pred EEec
Q 038977 116 HFVH 119 (145)
Q Consensus 116 ~~v~ 119 (145)
.+++
T Consensus 110 ~fi~ 113 (150)
T d1f06a2 110 NFID 113 (150)
T ss_dssp EECC
T ss_pred EEeC
Confidence 5553
No 19
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}
Probab=29.54 E-value=32 Score=16.96 Aligned_cols=54 Identities=9% Similarity=0.167 Sum_probs=33.5
Q ss_pred EeCcEEeC--hHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCccCHHHHHHHHHh
Q 038977 43 KFKGFQVP--PAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAK 104 (145)
Q Consensus 43 ~~~G~~v~--~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~ 104 (145)
++.|-... ...||..|.+.|+|..+.+-.... .+ .+...+ ...+.+++.+.+.+
T Consensus 8 ~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~-----~~--~v~~~~-~~~~~~~i~~~i~~ 63 (72)
T d1osda_ 8 SVPGMTCSACPITVKKAISKVEGVSKVDVTFETR-----QA--VVTFDD-AKTSVQKLTKATAD 63 (72)
T ss_dssp ECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTT-----EE--EEEEET-TTCCHHHHHHHHHH
T ss_pred EECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCC-----EE--EEEECC-CCCCHHHHHHHHHh
Confidence 34443333 568999999999999988743322 22 222222 23567788887776
No 20
>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.97 E-value=40 Score=16.92 Aligned_cols=55 Identities=16% Similarity=0.157 Sum_probs=35.2
Q ss_pred EEeCcEEeC--hHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeCCCCccCHHHHHHHHHh
Q 038977 42 IKFKGFQVP--PAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAK 104 (145)
Q Consensus 42 i~~~G~~v~--~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~ 104 (145)
+++.|-... ...||..|.+.++|..+.+-..... +.+...+ ...+..++.+.+.+
T Consensus 12 l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~-------v~v~~d~-~~~~~~~i~~~i~~ 68 (79)
T d1kvja_ 12 ISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKN-------ATIIYDP-KLQTPKTLQEAIDD 68 (79)
T ss_dssp EEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTE-------EEEEECT-TTCCHHHHHHHHHH
T ss_pred EEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCE-------EEEEECC-CCCCHHHHHHHHHh
Confidence 344554333 5789999999999999877533222 2233332 34677888888876
No 21
>d1o8ba2 d.58.40.1 (A:127-198) D-ribose-5-phosphate isomerase (RpiA), lid domain {Escherichia coli [TaxId: 562]}
Probab=25.86 E-value=22 Score=18.03 Aligned_cols=38 Identities=13% Similarity=0.164 Sum_probs=26.4
Q ss_pred EEcCCCeEEEEeecCCeEEeCcEEeChHHHHHHHhcCCCcceEEE
Q 038977 25 YVDHDDEVFIVDRVKEIIKFKGFQVPPAEIEALLLSHPSIADATV 69 (145)
Q Consensus 25 ~~~~~g~l~~~GR~d~~i~~~G~~v~~~~ie~~l~~~~~v~~~~~ 69 (145)
.++++|++-+.-.- +.--+|..++..|.+.|+|.+..+
T Consensus 34 ~iTDnGN~IlD~~~-------~~i~dp~~l~~~L~~ipGVVe~GL 71 (72)
T d1o8ba2 34 VVTDNGNVILDVHG-------MEILDPIAMENAINAIPGVVTVGL 71 (72)
T ss_dssp CCCTTSCEEEEEES-------CCBSCHHHHHHHHHTSTTEEEESE
T ss_pred eEecCCCEEEECCC-------CCCCCHHHHHHHHhCCCCEEecCC
Confidence 35667776654332 233478999999999999987644
No 22
>d2bz2a1 d.58.7.1 (A:35-113) Negative elongation factor E, NELF-E {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.44 E-value=36 Score=16.89 Aligned_cols=41 Identities=20% Similarity=0.273 Sum_probs=28.8
Q ss_pred eEEeCcEEeChHHHHHHHhcCCCcceEEEEeecCCCCCceeEEEEEeC
Q 038977 41 IIKFKGFQVPPAEIEALLLSHPSIADATVVPQKDEVAGEVPVAFVVRS 88 (145)
Q Consensus 41 ~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~ 88 (145)
.|-++|..+.-.+|.+.+.....|.++.+... .-+++|...
T Consensus 7 ti~V~~~~~te~~L~~~F~~~G~I~~v~~~~~-------~~~afV~f~ 47 (79)
T d2bz2a1 7 TLYVYGEDMTPTLLRGAFSPFGNIIDLSMDPP-------RNCAFVTYE 47 (79)
T ss_dssp EEEEECSSCCHHHHHHHHSTTCCCSCEEEETT-------TTEEEEECS
T ss_pred EEEEECCCCCHHHHHHHHhccCccceeeeccC-------CCEEEEEEc
Confidence 34445566888999999999988988776521 125677654
No 23
>d2idba2 d.333.1.1 (A:326-491) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD {Escherichia coli [TaxId: 562]}
Probab=25.38 E-value=63 Score=19.02 Aligned_cols=56 Identities=13% Similarity=0.067 Sum_probs=32.5
Q ss_pred CCCcceEEEEeecCCCCCceeEEEEEeCCCCccCHHHHHHHHHhccccccCceEEEEecc
Q 038977 61 HPSIADATVVPQKDEVAGEVPVAFVVRSNGFELTEEAIKEYIAKQVVFYKRLHKVHFVHA 120 (145)
Q Consensus 61 ~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~~~p~~~~~v~~ 120 (145)
+|+|.++.+...... ...+++..+....-...++...+-..+......+.+++|++
T Consensus 23 ~P~V~dV~~p~~g~~----~~~~vvsI~k~~pg~a~~~~~a~~~~~~~~~~~K~vivVD~ 78 (166)
T d2idba2 23 FPEIVDFYLPPEGCS----YRLAVVTIKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDD 78 (166)
T ss_dssp CTTEEEEECCGGGTT----TSEEEEEECCCSTTHHHHHHHHHHHSSGGGSSCCEEEEEET
T ss_pred CCCeEEEEechhcCe----eeEEEEEEEeCCccHHHHHHHHHHHhccccceeEEEEEeCC
Confidence 688877666533222 34566666665444455555555555555566677777753
No 24
>d2dara1 g.39.1.3 (A:53-84) PDZ and LIM domain protein 5, Enigma {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.32 E-value=12 Score=15.76 Aligned_cols=13 Identities=23% Similarity=0.703 Sum_probs=9.8
Q ss_pred CceEEEcCCCeEE
Q 038977 21 GDIGYVDHDDEVF 33 (145)
Q Consensus 21 GDl~~~~~~g~l~ 33 (145)
-|+|+..++|.+|
T Consensus 10 ~d~gFVEE~g~lY 22 (32)
T d2dara1 10 AYIGFVEEKGALY 22 (32)
T ss_dssp SSSCBEESSSCEE
T ss_pred hhcceeeecCcEe
Confidence 4777887888776
Done!