Query 038979
Match_columns 606
No_of_seqs 172 out of 293
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 08:12:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038979.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038979hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nkg_A Rhamnogalacturonase B; 100.0 9E-129 3E-133 1064.1 51.7 492 5-601 2-508 (508)
2 2nsm_A Carboxypeptidase N cata 97.9 1.9E-05 6.5E-10 85.7 9.4 94 305-425 320-414 (439)
3 1h8l_A Carboxypeptidase GP180 97.8 6.6E-05 2.3E-09 79.9 10.3 79 305-406 300-378 (380)
4 3mn8_A LP15968P; catalytic dom 97.7 3.7E-05 1.3E-09 83.5 7.3 90 306-419 337-428 (435)
5 1uwy_A Carboxypeptidase M; met 97.7 4.1E-05 1.4E-09 82.9 6.6 92 305-420 295-390 (426)
6 4aw7_A GH86A beta-porphyranase 96.4 0.0039 1.3E-07 69.5 6.7 82 498-586 491-575 (591)
7 1xpn_A Hypothetical protein PA 96.3 0.019 6.4E-07 54.7 9.9 94 304-400 42-166 (170)
8 3qec_A Putative carbohydrate b 96.1 0.042 1.4E-06 51.3 11.4 95 303-400 21-146 (150)
9 2w87_A Esterase D, XYL-CBM35; 95.9 0.085 2.9E-06 48.1 12.1 90 498-603 41-132 (139)
10 2wz8_A Cellulosome protein doc 95.8 0.032 1.1E-06 52.1 9.3 87 498-601 49-148 (156)
11 2w3j_A Carbohydrate binding mo 95.6 0.04 1.4E-06 50.7 8.7 88 498-603 41-130 (145)
12 2w47_A Lipolytic enzyme, G-D-S 95.3 0.13 4.6E-06 46.8 11.2 88 498-603 42-132 (144)
13 2vzp_A Aocbm35, EXO-beta-D-glu 94.5 0.26 8.8E-06 43.7 10.4 85 498-599 41-127 (127)
14 2bgo_A Endo-B1,4-mannanase 5C; 94.4 0.19 6.3E-06 46.3 9.3 87 496-603 36-123 (140)
15 3kcp_A Cellulosomal-scaffoldin 92.7 0.21 7.1E-06 51.8 7.3 64 304-381 156-223 (321)
16 2xsu_A Catechol 1,2 dioxygenas 89.1 0.8 2.7E-05 47.5 7.7 63 304-372 135-202 (312)
17 1uxz_A Cellulase B; carbohydra 88.4 2.3 7.8E-05 38.0 9.4 77 508-601 52-129 (131)
18 2cdp_A Beta-agarase 1; carbohy 87.9 1.8 6E-05 40.3 8.6 81 507-600 77-159 (160)
19 2boy_A 3-chlorocatechol 1,2-di 87.5 0.54 1.8E-05 47.4 5.1 65 303-373 100-169 (254)
20 2azq_A Catechol 1,2-dioxygenas 87.4 1 3.5E-05 46.6 7.2 64 303-372 130-198 (311)
21 3th1_A Chlorocatechol 1,2-diox 85.2 1.1 3.8E-05 45.3 5.9 64 304-373 98-166 (260)
22 2bum_B Protocatechuate 3,4-dio 85.1 1.7 5.7E-05 43.5 7.2 65 303-373 76-150 (241)
23 1tmx_A Hydroxyquinol 1,2-dioxy 84.4 1.4 4.7E-05 45.3 6.3 65 303-373 131-199 (293)
24 2bum_A Protocatechuate 3,4-dio 84.0 1 3.4E-05 44.1 4.9 64 303-372 50-124 (209)
25 2y8k_A Arabinoxylanase, carboh 83.7 5.5 0.00019 43.2 11.2 87 498-603 398-484 (491)
26 3t63_M 3,4-PCD, protocatechuat 82.9 2.2 7.6E-05 42.5 7.0 67 301-373 73-149 (238)
27 3oba_A Beta-galactosidase; TIM 81.6 28 0.00097 41.5 17.0 41 4-44 746-786 (1032)
28 3n9t_A PNPC; phospholipid bind 81.2 2.4 8.3E-05 43.4 6.7 65 303-373 127-196 (290)
29 1ti6_B Pyrogallol hydroxytrans 81.2 1.9 6.7E-05 43.6 6.0 48 353-405 227-274 (274)
30 2h4e_A Transthyretin; amyloid, 80.7 1.9 6.4E-05 39.1 5.0 68 304-385 8-79 (127)
31 1dmh_A 1,2-CTD, catechol 1,2-d 80.4 1.6 5.5E-05 45.2 5.1 63 305-373 133-202 (311)
32 3hhy_A 1,2-CTD, catechol 1,2-d 79.4 1.9 6.4E-05 44.1 5.1 63 305-373 131-198 (280)
33 3o5u_A Chlorocatechol 1,2-diox 78.1 2.3 7.7E-05 42.9 5.2 63 304-372 102-170 (257)
34 2g2n_A Transthyretin-like prot 76.7 3.1 0.0001 37.0 5.1 67 304-385 2-72 (114)
35 3t63_A 3,4-PCD, protocatechuat 76.5 3.6 0.00012 39.9 6.0 65 303-373 46-116 (200)
36 1yua_A Topoisomerase I; gene-r 75.1 0.38 1.3E-05 42.4 -1.2 85 91-193 23-110 (122)
37 4ank_A Transthyretin; hormone 75.0 2.3 7.8E-05 39.4 3.9 67 305-385 29-99 (147)
38 1oo2_A Transthyretin; retinol- 72.9 3.8 0.00013 36.6 4.7 64 308-385 4-71 (119)
39 1w9s_A BH0236 protein, BHCBM6; 72.9 23 0.00077 31.8 10.1 81 509-601 59-140 (142)
40 2v4v_A GH59 galactosidase; hyd 72.0 21 0.00072 31.4 9.5 79 509-600 49-128 (129)
41 3irp_X URO-adherence factor A; 71.6 3.6 0.00012 44.4 5.0 65 304-378 304-372 (429)
42 1f86_A Transthyretin Thr119Met 69.5 5.9 0.0002 35.1 5.2 55 322-385 12-70 (115)
43 3qva_A Transthyretin-like prot 68.0 8.1 0.00028 34.3 5.7 58 304-376 8-68 (116)
44 1uxx_X Xylanase U; carbohydrat 65.8 35 0.0012 30.2 9.6 78 509-603 51-130 (133)
45 1tg7_A Beta-galactosidase; TIM 65.5 3.7 0.00013 48.7 3.8 71 496-584 855-930 (971)
46 3kpt_A Collagen adhesion prote 63.3 9.2 0.00031 39.9 6.0 47 322-376 18-64 (355)
47 3fn9_A Putative beta-galactosi 59.9 6.7 0.00023 44.8 4.6 69 495-585 63-132 (692)
48 4hg6_B Cellulose synthase subu 57.9 14 0.00047 42.2 6.5 77 495-583 319-402 (707)
49 3e8v_A Possible transglutamina 57.8 50 0.0017 27.5 8.3 50 322-382 11-64 (82)
50 2ww8_A RRGA, cell WALL surface 56.3 28 0.00096 40.9 9.1 79 305-399 47-128 (893)
51 2vzs_A CSXA, EXO-beta-D-glucos 56.1 2.4 8.1E-05 50.6 0.0 85 497-599 945-1032(1032)
52 2h0e_A Transthyretin-like prot 55.0 7.9 0.00027 34.7 3.2 63 306-386 9-76 (121)
53 3uaf_A TTR-52; beta barrel/san 52.6 17 0.00059 32.2 5.0 52 304-365 3-56 (117)
54 3iwv_A 5-hydroxyisourate hydro 52.5 3.5 0.00012 37.7 0.5 67 305-385 25-96 (138)
55 1yq2_A Beta-galactosidase; gly 51.3 11 0.00038 44.9 4.7 67 496-584 122-191 (1024)
56 3lpf_A Beta-glucuronidase; alp 51.2 12 0.00041 41.8 4.7 66 496-584 71-138 (605)
57 3cmg_A Putative beta-galactosi 51.1 10 0.00035 42.8 4.1 68 495-584 52-120 (667)
58 2pz4_A Protein GBS052; SPAB, G 49.7 46 0.0016 32.4 8.2 73 324-400 141-224 (239)
59 3q1n_A Galactose mutarotase re 49.7 70 0.0024 32.0 9.8 34 13-46 2-37 (294)
60 2x5p_A FBA2, fibronectin bindi 49.6 28 0.00094 30.9 5.9 64 322-398 38-103 (121)
61 1uy4_A Endo-1,4-beta-xylanase 48.8 65 0.0022 29.0 8.5 76 509-601 68-143 (145)
62 4hg6_B Cellulose synthase subu 48.6 10 0.00035 43.2 3.6 73 495-584 62-139 (707)
63 1od3_A Putative xylanase; hydr 48.0 67 0.0023 29.8 8.6 77 509-602 90-166 (168)
64 3bga_A Beta-galactosidase; NYS 47.9 12 0.0004 44.7 4.1 67 496-584 130-196 (1010)
65 1jov_A HI1317; hypothetical pr 46.6 1.3E+02 0.0043 29.7 11.0 40 4-43 12-55 (270)
66 2je8_A Beta-mannosidase; glyco 44.6 16 0.00056 42.5 4.6 65 497-583 69-134 (848)
67 3gm8_A Glycoside hydrolase fam 44.5 18 0.00061 42.0 4.9 67 496-585 70-137 (801)
68 3og2_A Beta-galactosidase; TIM 44.0 23 0.00078 42.0 5.6 68 498-582 889-960 (1003)
69 4fxt_A Uncharacterized protein 42.0 93 0.0032 30.1 8.7 64 305-379 7-70 (202)
70 2pz4_A Protein GBS052; SPAB, G 40.4 12 0.00041 36.7 2.2 25 352-376 71-95 (239)
71 3oba_A Beta-galactosidase; TIM 40.0 15 0.00051 43.9 3.4 66 496-584 116-183 (1032)
72 1cwv_A Invasin; integrin-bindi 39.1 1.5E+02 0.005 32.2 10.9 81 301-396 21-103 (492)
73 1jz7_A Lactase, beta-galactosi 39.0 26 0.00089 41.8 5.2 39 7-45 740-778 (1023)
74 1jz7_A Lactase, beta-galactosi 38.5 21 0.00073 42.5 4.3 68 495-584 122-190 (1023)
75 3c7f_A Xylanase D, endo-1,4-be 37.5 1.1E+02 0.0039 32.6 9.7 81 509-601 406-486 (487)
76 3v9f_A Two-component system se 37.0 36 0.0012 38.3 5.8 26 352-377 731-756 (781)
77 3dcd_A Galactose mutarotase re 35.1 2.4E+02 0.0083 28.3 11.2 33 13-45 2-36 (307)
78 3d3a_A Beta-galactosidase; pro 34.3 28 0.00095 39.2 4.2 68 493-585 508-575 (612)
79 4a2l_A BT_4663, two-component 34.1 32 0.0011 38.7 4.8 26 352-377 737-762 (795)
80 3isy_A Bsupi, intracellular pr 34.0 41 0.0014 29.9 4.5 16 365-380 89-104 (120)
81 1r6v_A Subtilisin-like serine 33.9 82 0.0028 35.7 8.0 59 305-376 445-503 (671)
82 3ott_A Two-component system se 32.0 39 0.0013 37.8 5.0 27 352-378 702-729 (758)
83 3hn5_A Putative exported prote 31.2 1.3E+02 0.0044 29.3 7.8 62 305-376 10-71 (215)
84 3phz_A Ricin B-related lectin; 28.5 1.2E+02 0.0041 30.9 7.3 78 323-427 76-156 (286)
85 1b4r_A Protein (PKD1_human); P 28.5 54 0.0018 26.9 4.0 29 366-394 52-80 (80)
86 4e8d_A Glycosyl hydrolase, fam 27.4 26 0.0009 39.2 2.5 64 493-581 506-569 (595)
87 3kpt_A Collagen adhesion prote 27.3 56 0.0019 33.9 4.8 65 308-376 249-313 (355)
88 3hn3_A Beta-G1, beta-glucuroni 26.9 28 0.00095 38.7 2.6 67 496-584 81-154 (613)
89 3qht_C Monobody YSMB-1; fibron 22.4 66 0.0022 25.9 3.5 37 357-393 56-94 (97)
90 2xtl_A Cell WALL surface ancho 22.4 33 0.0011 37.1 2.0 43 353-397 378-423 (452)
91 2x9x_A RRGB, cell WALL surface 22.3 33 0.0011 36.9 2.0 43 353-397 372-417 (444)
92 3b83_A Ten-D3; beta sheet, com 21.9 70 0.0024 25.9 3.6 22 357-378 53-75 (100)
93 3lvt_A Glycosyl hydrolase, fam 21.3 7.3E+02 0.025 28.8 13.2 111 14-131 528-681 (899)
94 4eiu_A Uncharacterized hypothe 21.1 5.1E+02 0.017 25.7 10.1 65 305-376 9-76 (249)
95 3cih_A Putative alpha-rhamnosi 20.8 1.2E+02 0.004 34.5 6.3 54 496-586 61-114 (739)
96 3bwu_D FIMD, outer membrane us 20.7 83 0.0028 27.4 4.0 26 365-393 27-52 (125)
97 2x9x_A RRGB, cell WALL surface 20.6 1.1E+02 0.0037 32.8 5.6 33 553-586 383-416 (444)
98 4b0m_A F1 capsule-anchoring pr 20.4 53 0.0018 29.5 2.6 19 361-379 22-40 (136)
No 1
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=100.00 E-value=9.1e-129 Score=1064.09 Aligned_cols=492 Identities=17% Similarity=0.267 Sum_probs=440.0
Q ss_pred eEEEEeCCEEEE---eCCeEEEEEeCCceeEEEEEEcCEEeccccCCCccCcCccceEEEEEEccCcEEEEEEEEeecCC
Q 038979 5 VQLHEQNNHVVM---NNGILQVSISTPQGFVIGIQYKGNKNLLNVQNEEDNRGIEATNYKVIMRTKEQVELSFTRMWQPY 81 (606)
Q Consensus 5 v~~~~~g~~vv~---~Ng~l~vtv~k~~g~itsl~y~G~e~l~~~~~~~~~~Gl~~~~~~v~~~~~~~i~vs~~~~~~~~ 81 (606)
..+++++++||| +||+|+|+|+|++|+|+||+|+|+|+|++.+++++++|+++++|++++. +++|+|+|++
T Consensus 2 ~g~t~~~~~~vvd~g~n~~l~~tv~k~~G~itsi~y~G~e~~~~~~~s~~gsg~G~~~~~~~~~-~~~i~vs~~~----- 75 (508)
T 1nkg_A 2 FGITTSSSAYVIDTNAPNQLKFTVSRSSCDITSIIHYGTELQYSSQGSHIGSGLGSATVTATQS-GDYIKVTCVT----- 75 (508)
T ss_dssp CEEEECSSEEEEECCCTTCEEEEEETTTCCEEEEEETTEECBCSSSCBEETTCCSSCEEEEEEE-TTEEEEEEEC-----
T ss_pred ccEEecCCEEEEECCCCCEEEEEEeCCCceEEEEEECCEEccccCCCcccccCCCcceEEEEec-CCEEEEEEEe-----
Confidence 357999999999 4559999999999999999999999999888889999999999999886 5899999998
Q ss_pred CCCCccceeeeEEEEEEcCCceEEEEEEeecccCCCCCcccccEEEEeCCCCCCcceeeccccccccCCcccccccceee
Q 038979 82 TNGTIAPVNIDKRFLMLRGSSGFYSYAIYKRLKGWPGFQLFNNRMVFKPNPDKFHYMIISGNRQREMPLQQDRERGHKLA 161 (606)
Q Consensus 82 ~~g~~~~~~l~~~~v~r~g~sgiY~y~i~~~~~~~p~~~lge~R~v~Rl~~~~f~~~~~~d~r~~~~P~~~d~~~g~~l~ 161 (606)
+ +||||||||+|++|||||++++ .+++|+|+|+||||++++|++ ++|.||+|+++ .|++ +
T Consensus 76 --~-----~l~~~~v~~~g~sg~Y~y~~~~-----~~~~lge~R~v~Rl~~~~f~~------~~r~~~~p~~~-~~~~-v 135 (508)
T 1nkg_A 76 --D-----TLTQYMVVHNGDPIIHMATYIT-----AEPSIGELRFIARLNSDLLPN------EEPFGDVSTTA-DGTA-I 135 (508)
T ss_dssp --S-----SEEEEEEEETTCCEEEEEEEES-----SCCTTSCEEEEEEECTTTCCE------EETTGGGGCCT-TCEE-E
T ss_pred --C-----CceEEEEEeCCCceEEEEEeec-----cCCCCCceEEEEEcChhhCCC------ccccCCCCccc-cCcE-e
Confidence 3 5999999999999999999885 378999999999999999976 25899999874 4655 8
Q ss_pred eeceEEcCCCEeecceecccccccceeEEEEeCCCceEEEEEcCCCCcccCCCceecccccCCC---ceEEEEeeecccc
Q 038979 162 YEEAVLLPNGEVDDKYQYSMDAKDIRVHGWISTDSTVGFWQILPSSESRSFGPLKQFLTSHTGP---ISINTFHSTHYVG 238 (606)
Q Consensus 162 ~~e~v~l~~G~~~sKY~~s~~~~d~~vhG~~s~g~~vG~W~I~~s~E~~sGGP~kqdL~~h~g~---~~ln~~~s~H~~g 238 (606)
++|+++..+|+++||||||+++||++||||+ +++||||||+|++||++||||||||++|+++ ++||||+|+|++
T Consensus 136 ~~~d~~~l~G~~~~KY~~s~~~~D~~vhG~~--~~~vG~w~I~~s~E~~sGGP~kqdL~~h~~~~~~~~~~y~~s~H~~- 212 (508)
T 1nkg_A 136 EGSDVFLVGSETRSKFYSSERFIDDQRHCIA--GDAHRVCMILNQYESSSGGPFHRDINSNNGGSYNALYWYMNSGHVQ- 212 (508)
T ss_dssp ETTTEEEETTEEEEGGGGCCBGGGCSEEEEE--CSSCEEEEECCCCTTCSSCTTCBCCCEEECSSCEEEEEEEECSTTC-
T ss_pred eeccceeeCCEEccceeccccceecceEEEE--CCCeEEEEEcCCcccccCCCcchhhhccCCcccceeeeeEeecccc-
Confidence 8998876699999999999999999999999 5999999999999999999999999999999 899999999987
Q ss_pred CcccccccCCcccc-eeeceEEEEEcCCCCCCCchhhHHHHHHHhhhhcccCCCCCCCC---CCCCCCCCCeEEEEEEEE
Q 038979 239 ENFGMKFKDGEAWK-KIFGPFLVYVNSVAGKGDRQMLWRDANRQFMNEVKSWPYKFPAS---KDFARSNKRGSISGRLIV 314 (606)
Q Consensus 239 ~~~~~~~~~ge~w~-k~~GP~~~y~N~g~~~~~~~~l~~Da~~~~~~E~~~WPy~f~~~---~~y~~~~qRGtVsG~v~~ 314 (606)
+|.++ |||||||||||+|++++ ++|||+|+++ ++|||+++||+|+|+|.
T Consensus 213 ---------t~~~~~g~~GP~~~y~n~g~~~~-----------------~~wpysf~~s~~~~~y~~~~~RGtVsG~V~- 265 (508)
T 1nkg_A 213 ---------TESYRMGLHGPYSMYFSRSGTPS-----------------TSIDTSFFADLDIKGYVAASGRGKVAGTAS- 265 (508)
T ss_dssp ---------CSCCCCEEEEEEEEEEESSCCCC-----------------SCCCCGGGGGTTCTTCCCGGGCBEEEEEEE-
T ss_pred ---------cccccccccccEEEEECCCCCCC-----------------CCCCCccccccCccCCcCcccccEEEEEEc-
Confidence 45555 99999999999998753 6999999988 99999999999999984
Q ss_pred eeccccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEeCcccCceeEEEEEECceeceeeeeeEEEEeC
Q 038979 315 KDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSIKNVLIGNYNLYAWIPGFIGDFKYHAAIRITA 394 (606)
Q Consensus 315 sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I~nV~pGtY~L~a~~~G~~G~~~~~~~VtV~a 394 (606)
+ .|+....|++ |. +++|||||+||++|+|+|++||||+|+|+||++|+ ...+.+|+|++
T Consensus 266 -G-------~~~~~~avv~--------~~--~k~~qywt~td~~G~FtI~~V~pGtY~L~a~~~G~---~~~~~~VtV~a 324 (508)
T 1nkg_A 266 -G-------ADSSMDWVVH--------WY--NDAAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEY---AVATSSVTVSA 324 (508)
T ss_dssp -S-------SCTTSCEEEE--------EE--CSSCEEEEECCTTCEEECCCBCSEEEEEEEEETTE---EEEEEEEEECT
T ss_pred -C-------ccCCceEEEE--------Ec--CCCceeEEEECCCCcEEeCCcCCceEEEEEEECce---EEEEeEEEEcC
Confidence 4 4444443443 32 89999999999999999999999999999999887 36677899999
Q ss_pred CceeeecceEEecCCCCCceeEEeccCCCccceecCCCCCcccccccccccccccchhHhhhhhhcCCCCeeEEEeccCC
Q 038979 395 GSAKQIGNLVYKAPRNGPTLWEIGIPDRSAAEFYIPNPNPKYINKLYVKHDRFRQYGLWERYAELHRKRDLVYEVWANNY 474 (606)
Q Consensus 395 G~t~~l~~l~~~~p~~~~~LweIG~~Drta~eF~~~d~~~~~~~~~~~~~d~~r~yglW~r~~~~~P~~dl~ytVG~S~~ 474 (606)
|++++++ |+|+++ ++++|||||+|||+|.||+++| +.++|||+++|+| +| +||+||||+|++
T Consensus 325 G~t~~l~-i~~~~~-~g~~iW~IG~pDrta~eF~~~d------~~~~~hp~~~r~~-~W---------~~l~ytVG~S~~ 386 (508)
T 1nkg_A 325 GSTTTKN-ISGSVK-TGTTIFKIGEWDGQPTGFRNAA------NQLRMHPSDSRMS-SW---------GPLTYTVGSSAL 386 (508)
T ss_dssp TCEEECC-EECCCC-CCSEEEEEECSSSSCTTSBTHH------HHTTSCTTCTTSC-CC---------CSCEEETTTSCG
T ss_pred CCeeEee-eEEecC-CCCeeEEeeCCCCCchhhcCCC------cccccCcchhccc-cc---------CCeEEEeCcCch
Confidence 9999997 999976 8999999999999999999998 3467899779998 77 479999999999
Q ss_pred CCceeeEEeeeecCCcccceeEEEEEEecCccccccEEEEEEEeec-cCCeEEEEEcCccCCCCCccccccCCCCeeeee
Q 038979 475 RKDWYFAQNTRKKGNKYEGSTWQIQFKLEGVVKKATYKLRVAVAAA-HGAELQVRVNSRSARRPLFSSGSVGRENAIARH 553 (606)
Q Consensus 475 ~~Dw~ya~~~~~~~~~~~~~~w~I~F~L~~~~~~~~~tLriala~a-~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~ 553 (606)
+||||||| +.. .++|+|+|+|+++| .+++||||+||+| +++++||+|||+..+.| .++.+++||||+||
T Consensus 387 -~Dw~ya~~-~~~-----~~~w~I~F~l~~~~-~~~~tLri~la~a~a~~~~qV~VN~~~~~~~--~~~~~~~~~~i~R~ 456 (508)
T 1nkg_A 387 -TDFPMAVF-KSV-----NNPVTIKFTATSAQ-TGAATLRIGTTLSFAGGRPQATINSYTGSAP--AAPTNLDSRGVTRG 456 (508)
T ss_dssp -GGSBSEEE-TTT-----TCCEEEEEEECGGG-CSCEEEEEEEEEEETTCEEEEEETTEECCCC--CCCCCCCSCCGGGT
T ss_pred -hcCCeEEE-CCC-----CCcEEEEEEcCccc-CCceEEEEEehhhccCCCeEEEECCcCCcCc--cccccCCCCeEEec
Confidence 79999999 332 27899999999988 4799999999998 68999999999877655 45568999999999
Q ss_pred EEEeecEEEEEEeecCceeeeecEEEEEeecCCC--CC--ceEEEEEEEEec
Q 038979 554 GIHGVYKLFNVDVPGKVLRKGNNTIYLSQPRKLD--AF--TGIMYDYLRFEG 601 (606)
Q Consensus 554 ~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~~--~~--~~vmyD~IrLe~ 601 (606)
++||+|++++|+||+++|++|+|+|+|+++++++ +| ++|||||||||.
T Consensus 457 ~~~G~~~~~~~~ipa~~L~~G~NtI~lt~~~~s~~~~fls~~vmyD~I~L~~ 508 (508)
T 1nkg_A 457 AYRGLGEVYDVSIPSGTIVAGTNTITINVISGSSGDTYLSPNFIFDCVELFQ 508 (508)
T ss_dssp CCCSCCCEEEEEECTTSSCSEEEEEEEEEECSCCCSGGGSSEEEEEEEEEEC
T ss_pred ceeeeeEEEEEEEcHHHeecCceEEEEEeccCCCCCccccccEEEEEEEecC
Confidence 9999999999999999999999999999999985 57 699999999984
No 2
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=97.94 E-value=1.9e-05 Score=85.72 Aligned_cols=94 Identities=15% Similarity=0.197 Sum_probs=62.1
Q ss_pred CeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEeCcccCceeEEEEEECceecee
Q 038979 305 RGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSIKNVLIGNYNLYAWIPGFIGDF 384 (606)
Q Consensus 305 RGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I~nV~pGtY~L~a~~~G~~G~~ 384 (606)
.+.|+|+|+-. .+.|..+|.|.+.. ....+.||.+|.|.+ .++||+|+|++.+.|+.
T Consensus 320 ~~~i~G~V~D~------~g~pi~gA~V~v~~-------------~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~--- 376 (439)
T 2nsm_A 320 HQGIKGMVLDQ------NYNNLANAVISVSG-------------INHDVTSGDHGDYFR-LLLPGIYTVSATAPGYD--- 376 (439)
T ss_dssp SCSEEEEEECT------TSCBCTTCEEEETT-------------EEEEEECCTTSEEEE-CCCSEEEEEEEECTTEE---
T ss_pred ccceEEEEEcC------CCCCccceEEEEEc-------------ccceeEECCCCeEEE-ccCCeeEEEEEEecCce---
Confidence 58899998533 38999999999843 245789999999988 59999999999997776
Q ss_pred eeeeEEEE-eCCceeeecceEEecCCCCCceeEEeccCCCcc
Q 038979 385 KYHAAIRI-TAGSAKQIGNLVYKAPRNGPTLWEIGIPDRSAA 425 (606)
Q Consensus 385 ~~~~~VtV-~aG~t~~l~~l~~~~p~~~~~LweIG~~Drta~ 425 (606)
.....|+| .++.++ . ++++.+ ...+|-||.+.+.+..
T Consensus 377 ~~~~~v~v~~~~~~~-~-~~~L~~--~~~~L~eVvV~~~~~~ 414 (439)
T 2nsm_A 377 PETVTVTVGPAEPTL-V-NFHLKR--SIPQVSPVRRAPSRRH 414 (439)
T ss_dssp CEEEEEEECSSSCEE-C-CEECEE--C---------------
T ss_pred eEEEEEEEecCCcce-E-eEEEcc--CCCccccEEEecCCCC
Confidence 44556888 666654 3 688875 6789999999886544
No 3
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=97.79 E-value=6.6e-05 Score=79.89 Aligned_cols=79 Identities=15% Similarity=0.233 Sum_probs=63.2
Q ss_pred CeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEeCcccCceeEEEEEECceecee
Q 038979 305 RGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSIKNVLIGNYNLYAWIPGFIGDF 384 (606)
Q Consensus 305 RGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I~nV~pGtY~L~a~~~G~~G~~ 384 (606)
.++|+|+|+-.+ .+.|..+|.|.+.. ....+.||++|.|.+ +++||+|+|++...|+.
T Consensus 300 ~~~i~G~V~D~~-----~g~pi~~A~V~v~~-------------~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~--- 357 (380)
T 1h8l_A 300 HRGIWGFVLDAT-----DGRGILNATISVAD-------------INHPVTTYKDGDYWR-LLVQGTYKVTASARGYD--- 357 (380)
T ss_dssp GCEEEEEEEETT-----TCSBCTTCEEEETT-------------EEEEEECCTTSEEEE-CCCSEEEEEEEECTTBC---
T ss_pred cccceEEEEeCC-----CCCccCceEEEEec-------------CcceeEECCCEEEEE-ecCCCcEEEEEEEcCcc---
Confidence 589999985431 27999999999843 245789999999998 59999999999998776
Q ss_pred eeeeEEEEeCCceeeecceEEe
Q 038979 385 KYHAAIRITAGSAKQIGNLVYK 406 (606)
Q Consensus 385 ~~~~~VtV~aG~t~~l~~l~~~ 406 (606)
..+..|+|.+++++.+ ++.++
T Consensus 358 ~~~~~v~v~~~~~~~~-~~~L~ 378 (380)
T 1h8l_A 358 PVTKTVEVDSKGGVQV-NFTLS 378 (380)
T ss_dssp CEEEEEEECSSCEEEC-CEEEC
T ss_pred ceEEEEEEcCCCeEEE-EEEec
Confidence 4455799999987776 47665
No 4
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=97.73 E-value=3.7e-05 Score=83.50 Aligned_cols=90 Identities=17% Similarity=0.123 Sum_probs=61.8
Q ss_pred eEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEeCcccCceeEEEEEECceeceee
Q 038979 306 GSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSIKNVLIGNYNLYAWIPGFIGDFK 385 (606)
Q Consensus 306 GtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I~nV~pGtY~L~a~~~G~~G~~~ 385 (606)
..|+|+|+-. .|.|..+|.|.+... ....+.||++|.|.+. ++||+|+|++.+.|+.. .
T Consensus 337 ~gv~G~V~D~------~G~pi~gA~V~v~g~------------~~~~~~Td~~G~y~~~-l~pG~Y~l~vs~~Gy~~--~ 395 (435)
T 3mn8_A 337 IGIKGLVTDA------SGFPIADANVYVAGL------------EEKPMRTSKRGEYWRL-LTPGLYSVHASAFGYQT--S 395 (435)
T ss_dssp SSEEEEEECS------SSCBCTTCEEEETTC------------TTSCEECCTTCEEEEC-CCSEEEEEEEEBTTBCC--C
T ss_pred ceeEEEEECC------CCCccCceEEEEecc------------cccceEeCCCCeEEEe-cCCCcEEEEEEEccccc--c
Confidence 4599998433 389999999998531 1345789999999885 99999999999988732 4
Q ss_pred eeeEEEEeCCc--eeeecceEEecCCCCCceeEEec
Q 038979 386 YHAAIRITAGS--AKQIGNLVYKAPRNGPTLWEIGI 419 (606)
Q Consensus 386 ~~~~VtV~aG~--t~~l~~l~~~~p~~~~~LweIG~ 419 (606)
....|+|.+++ .+.+ ++++++ +..+|-||-+
T Consensus 396 ~~~~v~v~~~~~~~~~~-~~~L~~--~~~~L~~v~~ 428 (435)
T 3mn8_A 396 APQQVRVTNDNQEALRL-DFKLAP--VETNFDGISS 428 (435)
T ss_dssp CCEEEEECCCSSSCEEC-CEECCB--C---------
T ss_pred eEEEEEEecCCcceeEE-EEEEee--cCCCCCeeEe
Confidence 55569999887 3356 588885 6778888864
No 5
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=97.67 E-value=4.1e-05 Score=82.86 Aligned_cols=92 Identities=15% Similarity=0.109 Sum_probs=62.7
Q ss_pred CeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEeCcccCceeEEEEEECceecee
Q 038979 305 RGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSIKNVLIGNYNLYAWIPGFIGDF 384 (606)
Q Consensus 305 RGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I~nV~pGtY~L~a~~~G~~G~~ 384 (606)
.+.|+|+|+-. .+.|..+|.|.+... +.+ .-+.||.+|.|.+ .+.||+|+|.+.+.|+.
T Consensus 295 ~~~I~G~V~D~------~g~pi~gA~V~v~g~---------~~~--~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~--- 353 (426)
T 1uwy_A 295 HLGVKGQVFDQ------NGNPLPNVIVEVQDR---------KHI--CPYRTNKYGEYYL-LLLPGSYIINVTVPGHD--- 353 (426)
T ss_dssp GCSEEEEEECT------TSCBCCSCEEEETTC---------CCS--SCCBCCTTCEEEE-CCCSEEEEEEEECSSSC---
T ss_pred cceeEEEEECC------CCCccCceEEEEEec---------ccc--ceeEeCCCCEEEe-ccCCeeEEEEEEEcCcc---
Confidence 57899998433 389999999998644 111 1267999999999 59999999999997765
Q ss_pred eeeeEEEEeCCc----eeeecceEEecCCCCCceeEEecc
Q 038979 385 KYHAAIRITAGS----AKQIGNLVYKAPRNGPTLWEIGIP 420 (606)
Q Consensus 385 ~~~~~VtV~aG~----t~~l~~l~~~~p~~~~~LweIG~~ 420 (606)
..+..|+|.+++ ++.+ ++++.+ +..+|-||.+-
T Consensus 354 ~~~~~v~v~~~~~~~~~~~~-~~~L~~--~~~~l~evv~~ 390 (426)
T 1uwy_A 354 PHITKVIIPEKSQNFSALKK-DILLPF--QGQLDSIPVSN 390 (426)
T ss_dssp CEEEEEEECSSCSSSSCEEC-CEECSS--CC---------
T ss_pred cEEEEEEEeCCCccccceEE-EEEEec--CCccccceeec
Confidence 555568998886 5556 578874 67889998874
No 6
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius}
Probab=96.37 E-value=0.0039 Score=69.55 Aligned_cols=82 Identities=16% Similarity=0.290 Sum_probs=57.2
Q ss_pred EEEEecCccc-cccEEEEEEEeecc--CCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeee
Q 038979 498 IQFKLEGVVK-KATYKLRVAVAAAH--GAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKG 574 (606)
Q Consensus 498 I~F~L~~~~~-~~~~tLriala~a~--~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 574 (606)
+.|++..++. .+.++|||++.-.. ...+.|.|||..+..|.=-. +.+.. -|.- +.-..+|+||+++|+++
T Consensus 491 ~~F~i~~v~tg~g~A~LRvg~gR~~g~s~~p~V~vNG~~v~vP~~w~---g~dq~-~r~~---fFg~ieipVp~~lL~~~ 563 (591)
T 4aw7_A 491 LSFPFTGIESGSGRASLRMSIGRPVSASKKPVVKINGTAVSVPDNWK---GYGQS-NRNI---FFGMIEVPFDIQLLKNG 563 (591)
T ss_dssp EEEEEEEECCCSEEEEEEEEEEEETTSCSCCEEEETTEEECCCSCCS---SCCCT-TSSE---EEEEEEEEECGGGCCSE
T ss_pred eEEEEecccCCCceEEEEEEcCcCCCcCCCCEEEECCEEeccCcccc---ccccc-Chhh---ceEEEEecCCHHHHhcC
Confidence 3344443332 36899999999874 35689999999887553221 22221 2443 44578999999999989
Q ss_pred ecEEEEEeecCC
Q 038979 575 NNTIYLSQPRKL 586 (606)
Q Consensus 575 ~NtI~l~~~~g~ 586 (606)
+|+|.++.+...
T Consensus 564 ~NtI~VtFPD~G 575 (591)
T 4aw7_A 564 DNNVDITFSDGG 575 (591)
T ss_dssp EEEEEEECSSCC
T ss_pred CCeEEEEecCCC
Confidence 999999998853
No 7
>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1
Probab=96.28 E-value=0.019 Score=54.67 Aligned_cols=94 Identities=16% Similarity=0.231 Sum_probs=60.6
Q ss_pred CCeEEEEEEEEeeccccccCcccCceEEEecCCCC-------------CCC---------cccccccceeEEEeCCCcce
Q 038979 304 KRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGR-------------AGS---------WQTECKGYQFWTVANEGGNF 361 (606)
Q Consensus 304 qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~-------------~g~---------~q~~~~~yqywt~td~~G~F 361 (606)
+.++|+|++.+... +..-.+..+..|.|.+.-. .|- |.-+-..|.--|.+|++|+|
T Consensus 42 G~~tI~G~a~~~~~--~G~~~~~~G~~V~L~P~T~Ys~er~~~yG~~~~g~~p~~~~~~~~dp~~~~y~r~t~~D~~G~F 119 (170)
T 1xpn_A 42 GGGVINGDLYLTSA--SGAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDPDVQPPVLDPRRATYVREATTDQNGRF 119 (170)
T ss_dssp CCCCEEEEECEECT--TSCEECCTTEEEEEEECCTHHHHHHHHSSSEEGGGCCSSSCCCCCCTTHHHHCEEEEECSSCEE
T ss_pred CCceEEEEEEEEcC--CCCEEecCCCEEEEEeCCHHHHHHHHHhCccccccccccccccccCchhhcceeEEEecCCCcE
Confidence 56899999988652 1122445566777764210 010 11223456777999999999
Q ss_pred EeCcccCceeEEEEEE---Cc------eeceeeeeeEEEEeCCceeee
Q 038979 362 SIKNVLIGNYNLYAWI---PG------FIGDFKYHAAIRITAGSAKQI 400 (606)
Q Consensus 362 ~I~nV~pGtY~L~a~~---~G------~~G~~~~~~~VtV~aG~t~~l 400 (606)
+|.+|+||+|-|.+.+ .. -.|.... ..|+|..|++.++
T Consensus 120 ~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~l~-k~Vtv~~Ge~~~v 166 (170)
T 1xpn_A 120 DFDHIPNGTYYISSELTWSAQSDGKTITEGGTVT-KLVTVSGSQPQKV 166 (170)
T ss_dssp EECSCCSEEEEEEEEEEEEEEETTEEEEEEEEEE-EEEEECCSSCEEE
T ss_pred EecCCCCccEEEEEEEeccCccccccccccceEE-EEEEeCCCcEEEE
Confidence 9999999999999852 11 1232333 3499998887655
No 8
>3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa}
Probab=96.14 E-value=0.042 Score=51.28 Aligned_cols=95 Identities=16% Similarity=0.225 Sum_probs=63.2
Q ss_pred CCCeEEEEEEEEeeccccccCcccCceEEEecCCCC-------------CCC--------cc-cccccceeEEEeCCCcc
Q 038979 303 NKRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGR-------------AGS--------WQ-TECKGYQFWTVANEGGN 360 (606)
Q Consensus 303 ~qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~-------------~g~--------~q-~~~~~yqywt~td~~G~ 360 (606)
.+.++|.|++.+.... ..-....+..|.|-+.-. ... +. -+-..|..-|.+|++|+
T Consensus 21 ~G~~tI~G~a~~r~~~--G~~~~c~g~~V~L~P~T~Y~~e~~~~~g~~~~~~r~~~~~~~~~d~~~~~y~r~t~cD~~G~ 98 (150)
T 3qec_A 21 VGEGVINGDLYLTSAS--GAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDPDVQPPVLDPRRATYVREATTDQNGR 98 (150)
T ss_dssp CCCEEEEEEEEEECTT--SCEEECCSCEEEEEECCHHHHHHHHHHTTCBSTTCCTTCCCCCCCTTSGGGCEEEECCTTSE
T ss_pred CCcceEEEEEEEECCC--CCEecCCCCEEEEEeCCHHHHHHHHHhcCcccccccCCCCCCCCChhHhcceeEEEeCCCCc
Confidence 4679999999887631 111355667788863200 000 11 23467788899999999
Q ss_pred eEeCcccCceeEEEEEEC------c---eeceeeeeeEEEEeCCceeee
Q 038979 361 FSIKNVLIGNYNLYAWIP------G---FIGDFKYHAAIRITAGSAKQI 400 (606)
Q Consensus 361 F~I~nV~pGtY~L~a~~~------G---~~G~~~~~~~VtV~aG~t~~l 400 (606)
|++++|+||+|-|.+.+. + ..|..... .|+|+.|++..+
T Consensus 99 F~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~lmk-~V~v~ggq~~~v 146 (150)
T 3qec_A 99 FDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTK-LVTVSGSQPQKV 146 (150)
T ss_dssp EEEEEECSEEEEEEEEEEEEEESSSSEEEEEEEEEE-EEEESSSCCCCE
T ss_pred EEECCCCCccEEEEEEEEeccCCCCCcccccceEEE-EEEEcCCcEEEE
Confidence 999999999999988742 1 12334444 499999988654
No 9
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=95.89 E-value=0.085 Score=48.09 Aligned_cols=90 Identities=19% Similarity=0.217 Sum_probs=55.1
Q ss_pred EEEEecCccccccEEEEEEEeecc--CCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeeee
Q 038979 498 IQFKLEGVVKKATYKLRVAVAAAH--GAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKGN 575 (606)
Q Consensus 498 I~F~L~~~~~~~~~tLriala~a~--~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 575 (606)
|.|++.. +..|.|+|+|-.|... ...+.|.|||..... .+..++.... + -.+....+.|+ |++|.
T Consensus 41 v~~~V~v-~~aG~Y~l~~ryang~~~~r~~~l~VNG~~~g~---~~v~~p~Tg~-----W-~~w~t~~~~v~---L~aG~ 107 (139)
T 2w87_A 41 VVWAIDA-TSSGRRTLTIRYANGGTANRNGSLVINGGSNGN---YTVSLPTTGA-----W-TTWQTATIDVD---LVQGN 107 (139)
T ss_dssp EEEEEEE-SSCEEEEEEEEEECCSSSCCCEEEEETTTTTCE---EEECCCCCSS-----T-TCCEEEEEEEE---ECSEE
T ss_pred EEEEEEC-CCCcEEEEEEEEECCCCCCceEEEEECCEEcce---eEEEecCCCC-----C-CccEEEEEEEE---ECCCc
Confidence 4555542 3458999999998753 467999999975410 0001121110 0 01333345554 89999
Q ss_pred cEEEEEeecCCCCCceEEEEEEEEecCC
Q 038979 576 NTIYLSQPRKLDAFTGIMYDYLRFEGPD 603 (606)
Q Consensus 576 NtI~l~~~~g~~~~~~vmyD~IrLe~p~ 603 (606)
|+|+|....+ .+ ++-.|+|+|+.+.
T Consensus 108 ntI~l~~~~~-~g--~~niD~i~v~~~~ 132 (139)
T 2w87_A 108 NIVQLSATTA-EG--LPNIDSLSVVGGT 132 (139)
T ss_dssp EEEEEEESST-TC--CCEEEEEEEESSS
T ss_pred eEEEEEEcCC-CC--CEEEEEEEEecCC
Confidence 9999986533 22 4778999998764
No 10
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=95.85 E-value=0.032 Score=52.14 Aligned_cols=87 Identities=22% Similarity=0.256 Sum_probs=53.1
Q ss_pred EEEE-ecCccccccEEEEEEEeecc------------CCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEE
Q 038979 498 IQFK-LEGVVKKATYKLRVAVAAAH------------GAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNV 564 (606)
Q Consensus 498 I~F~-L~~~~~~~~~tLriala~a~------------~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~ 564 (606)
|.|+ +.. +..|.|+|+|-.+... ...+.|.|||..... ..++.... + -.+....+
T Consensus 49 vtf~~V~~-~~aG~Y~l~irYang~~~~~~~y~~~~~~r~~~v~VNG~~~~~-----v~fp~Tg~-----W-~~~~~~tv 116 (156)
T 2wz8_A 49 LQFNNVYV-PQAGTYRMVVQFANAEVFGQHSYNNNVVDRYCSISVNGGPEKG-----HYFFNTRG-----W-NTYRTDII 116 (156)
T ss_dssp EEEEEEEE-SSCEEEEEEEEEECCCBC-------CBCCEEEEEEETTCCCEE-----EEECCCSS-----T-TCCEEEEE
T ss_pred EEEEEEec-CCCcEEEEEEEEECCCcccccccCCccCcceEEEEECCceeeE-----EEeCCCCC-----C-CcceEEEE
Confidence 4454 443 3458999999998653 356999999975321 11221110 1 12345566
Q ss_pred EeecCceeeeecEEEEEeecCCCCCceEEEEEEEEec
Q 038979 565 DVPGKVLRKGNNTIYLSQPRKLDAFTGIMYDYLRFEG 601 (606)
Q Consensus 565 ~ipa~~L~~G~NtI~l~~~~g~~~~~~vmyD~IrLe~ 601 (606)
.|+ |++|.|+|+|.-.. ..++ +.=.|+|.|..
T Consensus 117 ~V~---L~aG~NtI~~~~~~-~~~~-~pdiD~i~v~~ 148 (156)
T 2wz8_A 117 DVY---LNAGNNTIRFYNGT-SGSY-APNIDKIAIAA 148 (156)
T ss_dssp EEE---ECSEEEEEEEECCS-TTCB-CCEEEEEEEEC
T ss_pred EEE---ECCCceEEEEEecC-CCCC-CcEEEEEEEec
Confidence 666 99999999998541 1232 34678888863
No 11
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=95.59 E-value=0.04 Score=50.73 Aligned_cols=88 Identities=23% Similarity=0.340 Sum_probs=54.3
Q ss_pred EEEEecCccccccEEEEEEEeec--cCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeeee
Q 038979 498 IQFKLEGVVKKATYKLRVAVAAA--HGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKGN 575 (606)
Q Consensus 498 I~F~L~~~~~~~~~tLriala~a--~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 575 (606)
|.|++.. +..|.|+|.|-.|.. ....+.|.|||..... ..++... ++. .+....+.|+ |++|.
T Consensus 41 v~~~V~v-~~aG~Y~l~~ryang~~~~r~~~l~VNG~~~~~-----v~~p~Tg-----~W~-~w~t~~~~v~---L~aG~ 105 (145)
T 2w3j_A 41 IVWSLSA-ASAKTYTAQIRFGNGGTSARRATVVVNDSQIKT-----LDFPTNS-----NWT-QWQTVNVDIP---LKAGT 105 (145)
T ss_dssp EEEEEEE-SSCEEEEEEEEEECCSSSCCCEEEEETTEEEEE-----ECCCCCS-----CTT-SCEEEEEEEE---ECSEE
T ss_pred EEEEEEC-CCCeEEEEEEEEECCCCCCeEEEEEECCeEeeE-----EEecCCC-----CCC-eeEEEEEEEE---ECCCc
Confidence 4555543 345899999999853 4567999999975421 1122111 000 1233344444 89999
Q ss_pred cEEEEEeecCCCCCceEEEEEEEEecCC
Q 038979 576 NTIYLSQPRKLDAFTGIMYDYLRFEGPD 603 (606)
Q Consensus 576 NtI~l~~~~g~~~~~~vmyD~IrLe~p~ 603 (606)
|+|+|....+ .+ ++-.|+|+|+...
T Consensus 106 ntI~l~~~~~-~g--~~niD~i~v~~~~ 130 (145)
T 2w3j_A 106 NSIKLVAETA-DG--LANIDSIRVTGNG 130 (145)
T ss_dssp EEEEEEECST-TC--CCEEEEEEECSTT
T ss_pred eEEEEEEecC-cC--CEEEEEEEEEcCC
Confidence 9999996433 23 5778999998654
No 12
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=95.30 E-value=0.13 Score=46.78 Aligned_cols=88 Identities=19% Similarity=0.273 Sum_probs=53.2
Q ss_pred EEEEecCccccccEEEEEEEeec--cCCeEEEEEcCccC-CCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeee
Q 038979 498 IQFKLEGVVKKATYKLRVAVAAA--HGAELQVRVNSRSA-RRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKG 574 (606)
Q Consensus 498 I~F~L~~~~~~~~~tLriala~a--~~~~~~V~vNg~~~-~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 574 (606)
|.|++.. +..|.|+|+|-.+.. ....+.|.|||... .. ..++.... +. .+....+.|+ |++|
T Consensus 42 v~~~V~v-~~aG~Y~l~~ryan~~~~~~~~~l~VNG~~~~~~-----v~~p~Tg~-----w~-~w~~~~~~v~---L~aG 106 (144)
T 2w47_A 42 IEWNVNA-PSSGSYALIFRYANGTTANRPMRITVNGNIVKPS-----MDFVSTGA-----WT-TWNEAGIVAN---LNQG 106 (144)
T ss_dssp EEEEEEE-SSSEEEEEEEEEECCSSSCCCEEEEETTEEEEEE-----ECCCCCSS-----TT-CCEEEEEEEE---ECSE
T ss_pred EEEEEEC-CCCcEEEEEEEEECCCCCCeEEEEEECCeEeeeE-----EEecCCCC-----CC-eeEEEEEEEE---ECCC
Confidence 4555543 345889999999875 35679999999752 11 01111110 00 1222233443 8999
Q ss_pred ecEEEEEeecCCCCCceEEEEEEEEecCC
Q 038979 575 NNTIYLSQPRKLDAFTGIMYDYLRFEGPD 603 (606)
Q Consensus 575 ~NtI~l~~~~g~~~~~~vmyD~IrLe~p~ 603 (606)
.|+|+|....+ .+ ++-.|+|+|+...
T Consensus 107 ~ntI~l~~~~~-~g--~~niD~i~v~~~~ 132 (144)
T 2w47_A 107 NNVIRATAIAS-DG--GPNVDYLKVFSAN 132 (144)
T ss_dssp EEEEEEEECST-TC--CCEEEEEEEEECT
T ss_pred ccEEEEEEeCC-CC--CEEEeEEEEEeCC
Confidence 99999985422 22 5889999998654
No 13
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=94.45 E-value=0.26 Score=43.71 Aligned_cols=85 Identities=19% Similarity=0.211 Sum_probs=50.1
Q ss_pred EEEEecCccccccEEEEEEEeec--cCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeeee
Q 038979 498 IQFKLEGVVKKATYKLRVAVAAA--HGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKGN 575 (606)
Q Consensus 498 I~F~L~~~~~~~~~tLriala~a--~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 575 (606)
|.|++.. +..|.|+|+|-.|.. ....+.|.|||..... ...++... ++. .+....+.|+ |++|.
T Consensus 41 v~~~V~v-~~aG~Y~l~~rya~~~~~~~~~~l~VnG~~~~~----~v~~p~tg-----~W~-~w~~~~~~v~---L~aG~ 106 (127)
T 2vzp_A 41 VEWTVTV-PSAGTYDVVVRYANGTTTSRPLDFSVNGSISAS----GVAFGSTG-----TWP-AWTTKTVRVT---LAAGV 106 (127)
T ss_dssp EEEEEEE-SSSEEEEEEEEEECCSSSCCCEEEEETTEEEEE----EECCCCCS-----STT-CCEEEEEEEE---ECSEE
T ss_pred EEEEEEc-CCCCEEEEEEEEEcCCCCCeEEEEEECCEEeee----EEEecCCC-----CCC-ceEEEEEEEE---ECCCc
Confidence 4455443 345899999999875 4568999999975310 01122110 000 1222234443 89999
Q ss_pred cEEEEEeecCCCCCceEEEEEEEE
Q 038979 576 NTIYLSQPRKLDAFTGIMYDYLRF 599 (606)
Q Consensus 576 NtI~l~~~~g~~~~~~vmyD~IrL 599 (606)
|+|+|....+. . ++-.|+|.+
T Consensus 107 ntI~l~~~~~~-~--~~niD~i~v 127 (127)
T 2vzp_A 107 NKIKAVATTAN-G--GPNVDKITL 127 (127)
T ss_dssp EEEEEEECSTT-C--CCEEEEEEC
T ss_pred eEEEEEEeCCC-C--CeEEEEEEC
Confidence 99999975332 2 477788864
No 14
>2bgo_A Endo-B1,4-mannanase 5C; carbohydrate binding protein, carbohydrate binding module; NMR {Cellvibrio japonicus} PDB: 2bgp_A
Probab=94.35 E-value=0.19 Score=46.31 Aligned_cols=87 Identities=9% Similarity=0.125 Sum_probs=55.1
Q ss_pred EEEEEEecCccccccEEEEEEEeec-cCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeee
Q 038979 496 WQIQFKLEGVVKKATYKLRVAVAAA-HGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKG 574 (606)
Q Consensus 496 w~I~F~L~~~~~~~~~tLriala~a-~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 574 (606)
=.|.|+++. +..|.|.|.|..+.. ...+-.+.|||. ... + .++.... .+.+. .+ =.|.+|
T Consensus 36 dsVtf~VdV-P~tG~YdLsI~Ya~~~G~k~n~L~VNG~-~~~-V----~fP~tt~---------~~~~~-~~--V~L~aG 96 (140)
T 2bgo_A 36 SAVIWNVDV-PVTGEYRINLTWSSPYSSKVNTLVMDGT-ALS-Y----AFAEATV---------PVTYV-QT--KTLSAG 96 (140)
T ss_dssp CEEEEEECC-CSSEEEEEEEEECCCSSEEEEEEEETTE-EEE-E----EEESCCS---------CEEEE-EE--EEECSS
T ss_pred CEEEEEEec-CCCcEEEEEEEeccCCCCceEEEEECCc-eeE-E----EECCcCC---------cEEEE-EE--EEecCC
Confidence 355666643 445899999999764 345678999996 321 1 1121110 11111 11 578899
Q ss_pred ecEEEEEeecCCCCCceEEEEEEEEecCC
Q 038979 575 NNTIYLSQPRKLDAFTGIMYDYLRFEGPD 603 (606)
Q Consensus 575 ~NtI~l~~~~g~~~~~~vmyD~IrLe~p~ 603 (606)
.|+|.|.-.+| .|-++..|+|+|+...
T Consensus 97 ~NtI~i~~~~g--~WG~~~iD~I~l~~a~ 123 (140)
T 2bgo_A 97 NHSFGVRVGSS--DWGYMNVHSLKLELLG 123 (140)
T ss_dssp CEEEEEECCSS--SCCCCEEEEEEEEECC
T ss_pred ccEEEEEecCC--CceeEEEEEEEEEcCC
Confidence 99999986444 3557899999999664
No 15
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=92.65 E-value=0.21 Score=51.83 Aligned_cols=64 Identities=20% Similarity=0.325 Sum_probs=46.2
Q ss_pred CCeEEEEEEEEeeccc--cccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEeCcccCce--eEEEEEECc
Q 038979 304 KRGSISGRLIVKDRYV--SRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSIKNVLIGN--YNLYAWIPG 379 (606)
Q Consensus 304 qRGtVsG~v~~sd~~~--~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I~nV~pGt--Y~L~a~~~G 379 (606)
.-++|+|-|.. +-+. ........++.|-+..+ ..-+.+|++|+|+|.+|++|+ |+|.+..+|
T Consensus 156 ~~~~vsGYi~~-~~~~~~~~~~~~~~G~~V~i~gt-------------~~sa~tD~~G~f~I~~vp~~~~~ytl~i~~~g 221 (321)
T 3kcp_A 156 EGYKVSGYILP-DFSFDATVAPLVKAGFKVEIVGT-------------ELYAVTDANGYFEITGVPANASGYTLKISRAT 221 (321)
T ss_dssp SSEEEEEEEEE-SSCCCTTTHHHHHSCCEEEETTS-------------SCEEECCTTSEEEEEEECCEEEEEEEEEECTE
T ss_pred CCceEEEEEcc-ccccccccchhccCCcEEEEEec-------------cceeEECCCceEEEeccCCCCccEEEEEeecC
Confidence 46899999854 2100 01123445677877544 347889999999999999999 999999877
Q ss_pred ee
Q 038979 380 FI 381 (606)
Q Consensus 380 ~~ 381 (606)
+.
T Consensus 222 ~l 223 (321)
T 3kcp_A 222 YL 223 (321)
T ss_dssp EC
T ss_pred ce
Confidence 65
No 16
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=89.12 E-value=0.8 Score=47.48 Aligned_cols=63 Identities=14% Similarity=0.218 Sum_probs=45.3
Q ss_pred CCeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCccccc---cccee--EEEeCCCcceEeCcccCceeE
Q 038979 304 KRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTEC---KGYQF--WTVANEGGNFSIKNVLIGNYN 372 (606)
Q Consensus 304 qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~---~~yqy--wt~td~~G~F~I~nV~pGtY~ 372 (606)
++-.|.|+|+-.+ |.|..+|.|=+-.....|....+. .+... ...||++|.|.|.-|+||.|.
T Consensus 135 ~~l~v~G~V~D~~------G~Pv~gA~VeiWqada~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Y~ 202 (312)
T 2xsu_A 135 DTLIIEGTVTDTE------GNIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYG 202 (312)
T ss_dssp CEEEEEEEEEETT------SCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEE
T ss_pred eeEEEEEEEECCC------CCCCCCCEEEEEecCCCCcccCCCCCCCCCCCeeEEEeCCCceEEEEEECcCccc
Confidence 4789999996544 999999999996554444222110 11111 367899999999999999997
No 17
>1uxz_A Cellulase B; carbohydrate binding module, CBM6, mixted BETA1, 3-1, 4 linked glucan; 1.4A {Cellvibrio mixtus} SCOP: b.18.1.10 PDB: 1uy0_A* 1uyx_A* 1uyy_A* 1uyz_A* 1uz0_A*
Probab=88.36 E-value=2.3 Score=37.96 Aligned_cols=77 Identities=17% Similarity=0.321 Sum_probs=47.8
Q ss_pred cccEEEEEEEeec-cCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeeeecEEEEEeecCC
Q 038979 508 KATYKLRVAVAAA-HGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKGNNTIYLSQPRKL 586 (606)
Q Consensus 508 ~~~~tLriala~a-~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~ 586 (606)
++.++|.+-.|+. ++++++|++++ .. |...+-.++... +.. .|...+.+|+ |.+|.|+|+|....+
T Consensus 52 ~G~y~~~~rvas~~~gg~i~v~~~~-~g--~~~g~~~vp~Tg-----gw~-~w~t~~~~v~---l~~G~h~l~l~~~~g- 118 (131)
T 1uxz_A 52 SGSYLIEYRVASQNGGGSLTFEEAG-GA--PVHGTIAIPATG-----GWQ-TWTTIQHTVN---LSAGSHQFGIKANAG- 118 (131)
T ss_dssp SEEEEEEEEEEESSCCEEEEEEETT-SC--SEEEEEEECCCS-----EEE-EEEEEEEEEE---ECSEEECEEEEEEEC-
T ss_pred CCceEEEEEEECCCCCcEEEEEECC-CC--CEeeEEEeCCCC-----CCc-ccEEEEEEEE---eCCCeEEEEEEEcCC-
Confidence 4778888888775 46899999986 21 111121223221 111 2444444443 679999999997754
Q ss_pred CCCceEEEEEEEEec
Q 038979 587 DAFTGIMYDYLRFEG 601 (606)
Q Consensus 587 ~~~~~vmyD~IrLe~ 601 (606)
++-.|.|+|+.
T Consensus 119 ----~~nld~~~f~~ 129 (131)
T 1uxz_A 119 ----GWNLNWIRINK 129 (131)
T ss_dssp ----CCEEEEEEEEE
T ss_pred ----CEEEEEEEEEE
Confidence 48889998863
No 18
>2cdp_A Beta-agarase 1; carbohydrate-binding module, hydrolase; HET: GAL AAL; 1.59A {Saccharophagus degradans} PDB: 2cdo_A*
Probab=87.93 E-value=1.8 Score=40.26 Aligned_cols=81 Identities=12% Similarity=0.175 Sum_probs=47.2
Q ss_pred ccccEEEEEEEeec-cCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEE-EEEEeecCceeeeecEEEEEeec
Q 038979 507 KKATYKLRVAVAAA-HGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKL-FNVDVPGKVLRKGNNTIYLSQPR 584 (606)
Q Consensus 507 ~~~~~tLriala~a-~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~-~~~~ipa~~L~~G~NtI~l~~~~ 584 (606)
.+|.|+|.+-.|+. +++.++|+|||.....+.. +-.++. .| |.. .+++...=.|.+|.|+|+|....
T Consensus 77 ~aG~Y~i~~rvas~~~g~~i~l~vdg~~~~~~~g-~~~vp~---------tG-W~~w~t~t~~~v~L~aG~htL~l~~~g 145 (160)
T 2cdp_A 77 QAGNYTISYQAGSGVTGGSIEFLVNENGSWASKT-VTAVPN---------QG-WDNFQPLNGGSVYLSAGTHQVRLHGAG 145 (160)
T ss_dssp SCEEEEEEEEEEBSSSSCEEEEEEECSSSEEEEE-EEECCB---------SC-TTCCEEEEEEEEEECSEEEEEEEEECS
T ss_pred CCcEEEEEEEEEcCCCCceEEEEECCCCCceeee-EEEcCC---------CC-CceeEEeeeeEEEeCCCeEEEEEEEEC
Confidence 34889988888876 5678999999952100000 001111 12 221 12222123467999999999764
Q ss_pred CCCCCceEEEEEEEEe
Q 038979 585 KLDAFTGIMYDYLRFE 600 (606)
Q Consensus 585 g~~~~~~vmyD~IrLe 600 (606)
+++. ++-.|.|+|.
T Consensus 146 ~~~~--~~Nld~~~f~ 159 (160)
T 2cdp_A 146 SNNW--QWNLDKFTLS 159 (160)
T ss_dssp SSSB--CCEEEEEEEE
T ss_pred CCCC--cEEEEEEEEE
Confidence 4322 4688999885
No 19
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=87.51 E-value=0.54 Score=47.41 Aligned_cols=65 Identities=14% Similarity=0.311 Sum_probs=45.9
Q ss_pred CCCeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCccccc---ccce-e-EEEeCCCcceEeCcccCceeEE
Q 038979 303 NKRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTEC---KGYQ-F-WTVANEGGNFSIKNVLIGNYNL 373 (606)
Q Consensus 303 ~qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~---~~yq-y-wt~td~~G~F~I~nV~pGtY~L 373 (606)
.++-.|.|+|+-.+ |.|..+|.|=+-.....|....+. .+.. . ...||++|.|+|.-|+||.|.+
T Consensus 100 G~~l~l~G~V~D~~------G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~TI~Pg~Y~~ 169 (254)
T 2boy_A 100 GDTLIFRGEVVDQE------GAPLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAPYEI 169 (254)
T ss_dssp SCEEEEEEEEECTT------SCBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECCC------CCCCCCCEEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEEEECCccccC
Confidence 46789999995443 999999999996554444322111 0111 2 3678999999999999999964
No 20
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=87.37 E-value=1 Score=46.64 Aligned_cols=64 Identities=14% Similarity=0.306 Sum_probs=46.4
Q ss_pred CCCeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccc---ccccee--EEEeCCCcceEeCcccCceeE
Q 038979 303 NKRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTE---CKGYQF--WTVANEGGNFSIKNVLIGNYN 372 (606)
Q Consensus 303 ~qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~---~~~yqy--wt~td~~G~F~I~nV~pGtY~ 372 (606)
.++=.|.|+|+-.+ |.|..+|.|=+-.....|....+ ..+... ...||++|.|.|.-|+||-|.
T Consensus 130 G~~l~v~G~V~D~~------G~Pv~gA~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Y~ 198 (311)
T 2azq_A 130 GVVMFLQGQVFDAN------GKPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYG 198 (311)
T ss_dssp CCEEEEEEEEECSS------SCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEE
T ss_pred CcEEEEEEEEEcCC------CCCCCCceeEEEecCCCCccCCCCCCCCCCCCeeEEEeCCCceEEEEEEcCCCcC
Confidence 46789999996544 89999999999666555533211 111222 367899999999999999997
No 21
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=85.18 E-value=1.1 Score=45.29 Aligned_cols=64 Identities=17% Similarity=0.190 Sum_probs=45.8
Q ss_pred CCeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccc---cccce-e-EEEeCCCcceEeCcccCceeEE
Q 038979 304 KRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTE---CKGYQ-F-WTVANEGGNFSIKNVLIGNYNL 373 (606)
Q Consensus 304 qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~---~~~yq-y-wt~td~~G~F~I~nV~pGtY~L 373 (606)
++=.|+|+|+-.+ |.|..+|.|=+-+...+|....+ ..... + ...||++|.|.|.-|+||-|-+
T Consensus 98 ~pl~v~G~V~D~~------G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~TI~P~~Ypi 166 (260)
T 3th1_A 98 KPLIIRGTVRSDT------GELLAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVRTTMPVPYQI 166 (260)
T ss_dssp CEEEEEEEEEETT------SCBCSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CEEEEEEEEECCC------CCCcCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEEEECCCCCCC
Confidence 4568999996555 99999999999766555533211 11111 2 3678999999999999999953
No 22
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=85.07 E-value=1.7 Score=43.48 Aligned_cols=65 Identities=15% Similarity=0.278 Sum_probs=47.4
Q ss_pred CCCeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCccccc--------cccee--EEEeCCCcceEeCcccCceeE
Q 038979 303 NKRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTEC--------KGYQF--WTVANEGGNFSIKNVLIGNYN 372 (606)
Q Consensus 303 ~qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~--------~~yqy--wt~td~~G~F~I~nV~pGtY~ 372 (606)
.++=.|.|+|+-.+ |.|..+|.|=+-.....|....+. .+... ...||++|.|+|.-|+||-|.
T Consensus 76 G~~i~v~G~V~D~~------G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp 149 (241)
T 2bum_B 76 GERVIVHGYVRDQF------GRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYP 149 (241)
T ss_dssp SCEEEEEEEEEETT------SCBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEE
T ss_pred CcEEEEEEEEECCC------CCCCCCcEEEEEecCCCceeCCCCCCcccccCCCccceeEEEeCCCceEEEEEecCCccc
Confidence 45678999996544 999999999997766665433211 12222 266899999999999999997
Q ss_pred E
Q 038979 373 L 373 (606)
Q Consensus 373 L 373 (606)
.
T Consensus 150 ~ 150 (241)
T 2bum_B 150 W 150 (241)
T ss_dssp E
T ss_pred c
Confidence 5
No 23
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=84.37 E-value=1.4 Score=45.32 Aligned_cols=65 Identities=11% Similarity=0.189 Sum_probs=47.4
Q ss_pred CCCeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccc--cceeE--EEeCCCcceEeCcccCceeEE
Q 038979 303 NKRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECK--GYQFW--TVANEGGNFSIKNVLIGNYNL 373 (606)
Q Consensus 303 ~qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~--~yqyw--t~td~~G~F~I~nV~pGtY~L 373 (606)
.++=.|.|+|+-.+ |.|..+|.|=+-.....|....+.. +..++ ..||++|.|.|.-|+||-|..
T Consensus 131 G~~l~v~G~V~D~~------G~Pv~~A~VEiWqada~G~Y~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 199 (293)
T 1tmx_A 131 GEPCWVEGTVTDTD------GNPVPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFWAITPTPYPI 199 (293)
T ss_dssp SCEEEEEEEEEETT------SCBCTTCEEEEECCCTTSCCGGGSSSCCCCSEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECCC------CCCCCCceeEEEecCCCCcccCCccCCCCCceeEEEeCCCceEEEEEECCCcccC
Confidence 45778999996544 9999999999966655553332111 23333 668999999999999999964
No 24
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=84.00 E-value=1 Score=44.12 Aligned_cols=64 Identities=16% Similarity=0.276 Sum_probs=45.7
Q ss_pred CCCeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccc------ccee----EEEe-CCCcceEeCcccCcee
Q 038979 303 NKRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECK------GYQF----WTVA-NEGGNFSIKNVLIGNY 371 (606)
Q Consensus 303 ~qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~------~yqy----wt~t-d~~G~F~I~nV~pGtY 371 (606)
.++=.|.|+|+-. .|.|..+|.|=+-.....|....+.. +..| ...| |++|.|+|.-|+||-|
T Consensus 50 G~~l~v~G~V~D~------~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~TI~Pg~y 123 (209)
T 2bum_A 50 GQRIRLEGQVFDG------LGLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAV 123 (209)
T ss_dssp SCEEEEEECEECT------TSCBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEECCCCC
T ss_pred CCEEEEEEEEECC------CCCCCCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEEEEccCcc
Confidence 3567899998543 39999999999977666653332111 1223 2567 9999999999999998
Q ss_pred E
Q 038979 372 N 372 (606)
Q Consensus 372 ~ 372 (606)
.
T Consensus 124 p 124 (209)
T 2bum_A 124 P 124 (209)
T ss_dssp B
T ss_pred c
Confidence 5
No 25
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum}
Probab=83.71 E-value=5.5 Score=43.23 Aligned_cols=87 Identities=14% Similarity=0.241 Sum_probs=54.9
Q ss_pred EEEEecCccccccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeeeecE
Q 038979 498 IQFKLEGVVKKATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKGNNT 577 (606)
Q Consensus 498 I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~Nt 577 (606)
|.|++.. ...|.|+|.+-.|+.+++.++|+||+.... .+-.++..- +. -.|...+.+|. |.+|.|+
T Consensus 398 ~~y~v~~-~~~G~y~~~~rvas~~gg~i~v~~d~~~~~----g~~~vp~Tg-----gw-~~w~t~~~~v~---l~~G~~~ 463 (491)
T 2y8k_A 398 LEYTIRV-RNPGYYNLSLRVAGISGSRVQVSFGNQDKT----GVWELPATG-----GF-QTWTTATRQVF---LGAGLQK 463 (491)
T ss_dssp EEEEEEE-SSCEEEEEEEEEEECTTCEEEEEETTEESS----CSEECCCCS-----EE-EEEEEEEEEEE---ECSEEEE
T ss_pred EEEEEec-CCCccEEEEEEEEcCCCceEEEEECCccce----eEEEeCCCC-----CC-cccEEEEEEEE---eCCcEEE
Confidence 4455432 234788888888877788999999997421 111122221 11 12444444553 7899999
Q ss_pred EEEEeecCCCCCceEEEEEEEEecCC
Q 038979 578 IYLSQPRKLDAFTGIMYDYLRFEGPD 603 (606)
Q Consensus 578 I~l~~~~g~~~~~~vmyD~IrLe~p~ 603 (606)
|+|+...| ++-.|.|+|+..+
T Consensus 464 l~l~~~~g-----~~nld~~~f~~~~ 484 (491)
T 2y8k_A 464 LRINALSG-----GFNLNWIELSPIL 484 (491)
T ss_dssp EEEEESSS-----SEEEEEEEEEEC-
T ss_pred EEEEEecC-----CEEEEEEEEecCC
Confidence 99997655 4889999998654
No 26
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=82.93 E-value=2.2 Score=42.52 Aligned_cols=67 Identities=13% Similarity=0.257 Sum_probs=48.7
Q ss_pred CCCCCeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCccccc--------ccceeE--EEeCCCcceEeCcccCce
Q 038979 301 RSNKRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTEC--------KGYQFW--TVANEGGNFSIKNVLIGN 370 (606)
Q Consensus 301 ~~~qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~--------~~yqyw--t~td~~G~F~I~nV~pGt 370 (606)
+..++=.|.|+|+-.+ |.|..+|.|=+-.....|....+. .+...+ ..||++|.|.|.-|+||-
T Consensus 73 ~~G~~i~l~G~V~D~~------G~Pv~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~ 146 (238)
T 3t63_M 73 PIGERIIVAGRVVDQY------GKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGP 146 (238)
T ss_dssp CSSCEEEEEEEEEETT------SCBCTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCC
T ss_pred CCCcEEEEEEEEECCC------CCCCCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEEEECCcC
Confidence 3456789999996544 999999999997665555333211 122223 678999999999999999
Q ss_pred eEE
Q 038979 371 YNL 373 (606)
Q Consensus 371 Y~L 373 (606)
|..
T Consensus 147 Yp~ 149 (238)
T 3t63_M 147 APW 149 (238)
T ss_dssp EEE
T ss_pred ccC
Confidence 975
No 27
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=81.62 E-value=28 Score=41.54 Aligned_cols=41 Identities=12% Similarity=0.193 Sum_probs=37.8
Q ss_pred ceEEEEeCCEEEEeCCeEEEEEeCCceeEEEEEEcCEEecc
Q 038979 4 GVQLHEQNNHVVMNNGILQVSISTPQGFVIGIQYKGNKNLL 44 (606)
Q Consensus 4 ~v~~~~~g~~vv~~Ng~l~vtv~k~~g~itsl~y~G~e~l~ 44 (606)
.+++++++..+++.++.++++|+|.+|.++|++++|+|.+.
T Consensus 746 ~~~~~~~~~~~~v~~~~~~~~f~k~~G~l~s~~~~g~~~l~ 786 (1032)
T 3oba_A 746 AAKINDGKRYVSVESSGLHFILDKLLGKIESLKVKGKEISS 786 (1032)
T ss_dssp CCEEEECSSEEEEEETTEEEEEETTTTEEEEEEETTEEEEE
T ss_pred CcEEEecCCEEEEEECCEEEEEECCcceEEEEEECCEEEec
Confidence 46888999999999999999999999999999999998775
No 28
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=81.21 E-value=2.4 Score=43.42 Aligned_cols=65 Identities=15% Similarity=0.228 Sum_probs=47.4
Q ss_pred CCCeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccc---cccceeE--EEeCCCcceEeCcccCceeEE
Q 038979 303 NKRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTE---CKGYQFW--TVANEGGNFSIKNVLIGNYNL 373 (606)
Q Consensus 303 ~qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~---~~~yqyw--t~td~~G~F~I~nV~pGtY~L 373 (606)
.++=.|.|+|+-.+ |.|..+|.|=+-.....|....+ ..+...+ ..||++|.|.|.-|+||-|..
T Consensus 127 G~~l~l~G~V~D~~------G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~lRGr~~TD~~G~y~F~TI~Pg~Yp~ 196 (290)
T 3n9t_A 127 GVPALVYGRVLDVQ------GRPVVGAVLDVWQTADNGMYSGQDPDQPFGNLRGRYRSDNDGCFAIQTTVPVCYPI 196 (290)
T ss_dssp SCEEEEEEEEEETT------SCBCSSCEEEEECCCTTSCCTTTSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCeEEEEEEEECCC------CCCCCCCEEEEEccCCCCCcCCCCCCCCCCCceeEEEeCCCceEEEEEeCCCCcCC
Confidence 45788999996544 99999999999766555533311 1112223 578999999999999999974
No 29
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=81.20 E-value=1.9 Score=43.58 Aligned_cols=48 Identities=19% Similarity=0.253 Sum_probs=39.1
Q ss_pred EEeCCCcceEeCcccCceeEEEEEECceeceeeeeeEEEEeCCceeeecceEE
Q 038979 353 TVANEGGNFSIKNVLIGNYNLYAWIPGFIGDFKYHAAIRITAGSAKQIGNLVY 405 (606)
Q Consensus 353 t~td~~G~F~I~nV~pGtY~L~a~~~G~~G~~~~~~~VtV~aG~t~~l~~l~~ 405 (606)
+++|+-|.|-+..+.+|.|+|.+.+.|+ ....++.| .|+.+.||++.+
T Consensus 227 ~~~d~~G~f~~~~l~~G~y~v~v~a~g~----p~~~~~~~-~~~~~~lg~v~l 274 (274)
T 1ti6_B 227 AETNFFGEFKFDALDNGEYTVEIDADGK----SYSDTVVI-DDKSVDLGFIKL 274 (274)
T ss_dssp EECCTTSEEEEEEECSEEEEEEEEETTE----EEEEEEEE-SSSCEEEEEEEC
T ss_pred EeecCcCcEEEeccCCcceEEEEecCCC----CccceeEE-ccCccccceeeC
Confidence 5679999999999999999999998554 44456888 778888987753
No 30
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=80.75 E-value=1.9 Score=39.06 Aligned_cols=68 Identities=12% Similarity=0.168 Sum_probs=46.2
Q ss_pred CCeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceE----eCcccCceeEEEEEECc
Q 038979 304 KRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFS----IKNVLIGNYNLYAWIPG 379 (606)
Q Consensus 304 qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~----I~nV~pGtY~L~a~~~G 379 (606)
.++.++=.|+-.- .|+||.++.|-|......+.|+. -.-..||+||+.. -..+.+|.|+|..-
T Consensus 8 ~~~~LStHVLDt~-----~G~PAagv~V~L~~~~~~~~w~~-----l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~--- 74 (127)
T 2h4e_A 8 SKXPLMVKVLDAV-----RGSPAINVAVHVFRKAADDTWEP-----FASGKTSESGELHGLTTEEEFVEGIYKVEID--- 74 (127)
T ss_dssp --CCEEEEEEETT-----TTEECTTCEEEEEEECTTSCEEE-----EEEEECCTTSEECCSCCTTTCCSEEEEEEEC---
T ss_pred CcCCEEEEEecCC-----CcCCCCCCEEEEEEeCCCCCeEE-----EEEeecCCCccccCcCCCCCccceEEEEEEE---
Confidence 4677888876554 39999999999965321223552 3346789999873 34578999999986
Q ss_pred eeceee
Q 038979 380 FIGDFK 385 (606)
Q Consensus 380 ~~G~~~ 385 (606)
.|+|.
T Consensus 75 -tg~Yf 79 (127)
T 2h4e_A 75 -TKSYW 79 (127)
T ss_dssp -HHHHH
T ss_pred -hHHhH
Confidence 55554
No 31
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=80.40 E-value=1.6 Score=45.18 Aligned_cols=63 Identities=16% Similarity=0.323 Sum_probs=44.9
Q ss_pred CeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCccccc-----cccee--EEEeCCCcceEeCcccCceeEE
Q 038979 305 RGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTEC-----KGYQF--WTVANEGGNFSIKNVLIGNYNL 373 (606)
Q Consensus 305 RGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~-----~~yqy--wt~td~~G~F~I~nV~pGtY~L 373 (606)
+=.|.|+|+-.+ |.|..+|.|=+-.....|....+. .+... ...||++|.|.|.-|+||-|.+
T Consensus 133 ~l~l~G~V~D~~------G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~ 202 (311)
T 1dmh_A 133 TLILHGTIFDAD------GKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGC 202 (311)
T ss_dssp EEEEEEEEECTT------SCBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred eEEEEEEEEcCC------CCCCCCcEEEEEccCCCcccCCcCCcccCCCCCCeeEEEeCCCceEEEEEEcCCcccC
Confidence 568999985444 899999999996665555332111 11222 2668999999999999999963
No 32
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=79.39 E-value=1.9 Score=44.05 Aligned_cols=63 Identities=22% Similarity=0.337 Sum_probs=44.7
Q ss_pred CeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCccccc---cccee--EEEeCCCcceEeCcccCceeEE
Q 038979 305 RGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTEC---KGYQF--WTVANEGGNFSIKNVLIGNYNL 373 (606)
Q Consensus 305 RGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~---~~yqy--wt~td~~G~F~I~nV~pGtY~L 373 (606)
+=.|.|+|+-.+ |.|..+|.|=+-.....|....+. .+... ...||++|.|.|.-|+||-|-+
T Consensus 131 pl~l~G~V~D~~------G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~lRGr~~TD~dG~y~F~TI~Pg~Yp~ 198 (280)
T 3hhy_A 131 PLVFSGQVTDLD------GNGLAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQI 198 (280)
T ss_dssp EEEEEEEEECTT------SCBCSSCEEEEECCCTTSCCTTSSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred EEEEEEEEECCC------CCCCCCcEEEEEecCCCCCCCCCCCCCCCCcceEEEEeCCCceEEEEEECCcCcCC
Confidence 458899985444 899999999986665555332111 11122 3678999999999999999963
No 33
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=78.06 E-value=2.3 Score=42.93 Aligned_cols=63 Identities=17% Similarity=0.277 Sum_probs=45.3
Q ss_pred CCeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccc----cccceeE--EEeCCCcceEeCcccCceeE
Q 038979 304 KRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTE----CKGYQFW--TVANEGGNFSIKNVLIGNYN 372 (606)
Q Consensus 304 qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~----~~~yqyw--t~td~~G~F~I~nV~pGtY~ 372 (606)
++=.|.|+|+-.+ |.|..+|.|=+-.....|....+ ..+...+ ..||++|.|+|.-|+||-|-
T Consensus 102 ~~l~l~G~V~D~~------G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp 170 (257)
T 3o5u_A 102 DRMRFTGSVRDTS------GTPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYE 170 (257)
T ss_dssp CEEEEEEEEECTT------CCBCTTCEEEEECCCTTSCCTTSCTTSCSSCTTEEEECCCTTSEEEEEEECCCCEE
T ss_pred CEEEEEEEEECCC------CCCCCCcEEEEEecCCCCCCCCcCCCCCcccCceeEEEeCCCceEEEEEECCCCcC
Confidence 4678999985444 99999999999766555533211 1112222 56899999999999999995
No 34
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=76.72 E-value=3.1 Score=36.96 Aligned_cols=67 Identities=18% Similarity=0.309 Sum_probs=44.9
Q ss_pred CCeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceE----eCcccCceeEEEEEECc
Q 038979 304 KRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFS----IKNVLIGNYNLYAWIPG 379 (606)
Q Consensus 304 qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~----I~nV~pGtY~L~a~~~G 379 (606)
+|+.++=.|+-.- .|+||.++.|-|...... .|+. -.-..||+||+.. -..+.+|.|+|..-
T Consensus 2 ~~~~lstHVLDt~-----~G~PAagv~V~L~~~~~~-~~~~-----l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~--- 67 (114)
T 2g2n_A 2 QQNILSVHILNQQ-----TGKPAADVTVTLEKKADN-GWLQ-----LNTAKTDKDGRIKALWPEQTATTGDYRVVFK--- 67 (114)
T ss_dssp --CCEEEEEEETT-----TTEECCSCEEEEEEECSS-SEEE-----EEEEECCTTSEESCCSCSSCCCSEEEEEEEC---
T ss_pred CCCCeEEEEecCC-----CcCCCCCCEEEEEEeCCC-CcEE-----EEEEecCCCCccccccCCCCCCceEEEEEEE---
Confidence 5677888876554 399999999999643211 2441 2346689999862 23578899999986
Q ss_pred eeceee
Q 038979 380 FIGDFK 385 (606)
Q Consensus 380 ~~G~~~ 385 (606)
.|+|.
T Consensus 68 -tg~Yf 72 (114)
T 2g2n_A 68 -TGDYF 72 (114)
T ss_dssp -HHHHH
T ss_pred -hhHhH
Confidence 55554
No 35
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=76.53 E-value=3.6 Score=39.89 Aligned_cols=65 Identities=14% Similarity=0.291 Sum_probs=45.7
Q ss_pred CCCeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCccccc---ccceeE--EEeCCC-cceEeCcccCceeEE
Q 038979 303 NKRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTEC---KGYQFW--TVANEG-GNFSIKNVLIGNYNL 373 (606)
Q Consensus 303 ~qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~---~~yqyw--t~td~~-G~F~I~nV~pGtY~L 373 (606)
.++=.|.|+|+-.+ |.|..+|.|=+-.....|....+. .+...+ ..||++ |.|.+.-|+||-|..
T Consensus 46 G~~l~v~G~V~D~~------G~Pv~~A~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~~G~~~F~TI~Pg~Y~~ 116 (200)
T 3t63_A 46 GEHILLLGQVYDGN------GHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNN 116 (200)
T ss_dssp SCEEEEEECEECTT------SCBCSSCEEEEEECCTTSCCCCBCCTTSSBCSEEEEECCSSCCSEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECCC------CCCCCCCEEEEEccCCCCCcCCCCCCCCCccccceEecCCCCCEEEEEEECCcCcCC
Confidence 34678999985443 899999999986655554332211 112233 568998 999999999999974
No 36
>1yua_A Topoisomerase I; gene-regulating protein, DNA binding protein; NMR {Escherichia coli} SCOP: g.41.3.3 g.41.3.3
Probab=75.15 E-value=0.38 Score=42.37 Aligned_cols=85 Identities=25% Similarity=0.327 Sum_probs=50.1
Q ss_pred eeEEEEEEcCCceEEEEEEeeccc--CCCCCcccccEEE-EeCCCCCCcceeeccccccccCCcccccccceeeeeceEE
Q 038979 91 IDKRFLMLRGSSGFYSYAIYKRLK--GWPGFQLFNNRMV-FKPNPDKFHYMIISGNRQREMPLQQDRERGHKLAYEEAVL 167 (606)
Q Consensus 91 l~~~~v~r~g~sgiY~y~i~~~~~--~~p~~~lge~R~v-~Rl~~~~f~~~~~~d~r~~~~P~~~d~~~g~~l~~~e~v~ 167 (606)
.|-|||||+|-+|+++.+ ...++ +.-++-+.||+-. -|| +.+|.+++-. |..+ ..|.+++ |+
T Consensus 23 ~d~~fVLRDGAsGlFlAA-s~FPK~RETRaP~V~EL~~~~d~l-~~K~~yL~~A-------P~~D--~~Gn~ti----vr 87 (122)
T 1yua_A 23 SDAYFVLRDGAAGVFLAA-NTFPKSRETRAPLVEELYRFRDRL-PEKLRYLADA-------PQQD--PEGNKTM----VR 87 (122)
T ss_dssp SSCEEEEECCSSSCEEEE-TTTTSCCCCCSCBHHHHHHTTTTC-CSTTHHHHHS-------CSSC--TTCCCEE----EE
T ss_pred cCCEEEeeCCchhhhhhh-ccCCccccccchHHHHHHHHHHhc-CHHHHHhhcC-------CccC--CCCCeee----EE
Confidence 489999999999999998 44333 3335666666522 223 3456665422 2222 3555443 12
Q ss_pred cCCCEeecceecccccccceeEEEEe
Q 038979 168 LPNGEVDDKYQYSMDAKDIRVHGWIS 193 (606)
Q Consensus 168 l~~G~~~sKY~~s~~~~d~~vhG~~s 193 (606)
++ -.+|=||-..-+|-+.-||.+
T Consensus 88 fS---RKtKeqYV~sE~~GKaTgW~a 110 (122)
T 1yua_A 88 FS---RKTKQQYVSSEKDGKATGWSA 110 (122)
T ss_dssp EE---TTTTEEEEEECCTTSCCCCCE
T ss_pred ee---ccchhheeeeccCCcccceEE
Confidence 11 126667766667888888864
No 37
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=75.03 E-value=2.3 Score=39.41 Aligned_cols=67 Identities=12% Similarity=0.155 Sum_probs=47.0
Q ss_pred CeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEe----CcccCceeEEEEEECce
Q 038979 305 RGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSI----KNVLIGNYNLYAWIPGF 380 (606)
Q Consensus 305 RGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I----~nV~pGtY~L~a~~~G~ 380 (606)
|.-++=.|+-.- .|.||.++.|-|.....++.|+. -.-.+||++|+..- ....+|.|+|...
T Consensus 29 k~PLTtHVLDt~-----~G~PA~gv~V~L~~~~~~~~~~~-----l~~~~Td~DGR~~~ll~~~~~~~G~Y~L~F~---- 94 (147)
T 4ank_A 29 KCPLMVKVLDAV-----RGSPAINVAVHVFRKAADDTWEP-----FASGKTSESGELHGLTTEEEFVEGIYKVEID---- 94 (147)
T ss_dssp -CCEEEEEEETT-----TTEECCSCEEEEEEECTTSCEEE-----EEEEECCTTSEECCSCCTTTCCSEEEEEEEC----
T ss_pred CCCeEEEEEeCC-----CCcCCCCCEEEEEEECCCCCeEE-----EEEEEeCCCCCCCCCCCccccCCceEEEEEE----
Confidence 566888876543 39999999999975544455652 23467999998642 3567899999987
Q ss_pred eceee
Q 038979 381 IGDFK 385 (606)
Q Consensus 381 ~G~~~ 385 (606)
.|+|.
T Consensus 95 tg~Yf 99 (147)
T 4ank_A 95 TKSYW 99 (147)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 38
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=72.95 E-value=3.8 Score=36.65 Aligned_cols=64 Identities=13% Similarity=0.189 Sum_probs=42.4
Q ss_pred EEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcce----EeCcccCceeEEEEEECceece
Q 038979 308 ISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNF----SIKNVLIGNYNLYAWIPGFIGD 383 (606)
Q Consensus 308 VsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F----~I~nV~pGtY~L~a~~~G~~G~ 383 (606)
++=.|+-.- .|+||.++.|-|.....++.|+. -.-..||+||+. .-..+.+|.|+|..- .|+
T Consensus 4 lstHVLDt~-----~G~PAagv~V~L~~~~~~~~~~~-----l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~----tg~ 69 (119)
T 1oo2_A 4 LMVKILDAV-----KGTPAGSVALKVSQKTADGGWTQ-----IATGVTDATGEIHNLITEQQFPAGVYRVEFD----TKA 69 (119)
T ss_dssp EEEEEEETT-----TTEECTTCEEEEEEECTTSCEEE-----EEEEECCTTSCCTTCSCGGGCCSEEEEEEEC----HHH
T ss_pred eeEEEecCC-----CcCCCCCCEEEEEEeCCCCCcEE-----EEEEecCCCCcccCcCCCCCCCceEEEEEEE----hHH
Confidence 445554333 39999999999965322223552 334678999986 233578999999986 555
Q ss_pred ee
Q 038979 384 FK 385 (606)
Q Consensus 384 ~~ 385 (606)
|.
T Consensus 70 Yf 71 (119)
T 1oo2_A 70 YW 71 (119)
T ss_dssp HH
T ss_pred hH
Confidence 54
No 39
>1w9s_A BH0236 protein, BHCBM6; carbohydrate-binding module, lectin, beta-glucan, carbohydrate binding, glycoside hydrolase; 1.59A {Bacillus halodurans} SCOP: b.18.1.10 PDB: 1w9t_A* 1w9w_A*
Probab=72.89 E-value=23 Score=31.75 Aligned_cols=81 Identities=16% Similarity=0.290 Sum_probs=47.9
Q ss_pred ccEEEEEEEeec-cCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeeeecEEEEEeecCCC
Q 038979 509 ATYKLRVAVAAA-HGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKGNNTIYLSQPRKLD 587 (606)
Q Consensus 509 ~~~tLriala~a-~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~~ 587 (606)
+.++|.+-+|+. +++.++|++++.+.. +..+-.++...+ --.|...+.+|+ +.+|.+.|+|....+.+
T Consensus 59 G~~~~~~rvas~~~gg~iev~~d~~~G~--~~gt~~v~~Tgg------w~~w~t~~~~v~---~~~G~h~l~l~f~g~~~ 127 (142)
T 1w9s_A 59 DASSIEVRVASDTPGGRIEIRTGSPTGT--LLGDVQVPNTGG------WQQWQTVTGNVQ---IQPGTYDVYLVFKGSPE 127 (142)
T ss_dssp CEEEEEEEEEESSSCEEEEEEESSTTSC--EEEEEEECCCSE------EEEEEEEEEEEE---ECSEEEEEEEEEESCTT
T ss_pred CcEEEEEEEEcCCCCeEEEEEECCCCCe--EEEEEEeCCCCC------CcccEEEEEEEc---cCCcEEEEEEEEECCCC
Confidence 667777777765 468999999976532 111112222211 113455555554 46899999998764311
Q ss_pred CCceEEEEEEEEec
Q 038979 588 AFTGIMYDYLRFEG 601 (606)
Q Consensus 588 ~~~~vmyD~IrLe~ 601 (606)
. .-+-.|.++++.
T Consensus 128 ~-~~~nld~~~f~~ 140 (142)
T 1w9s_A 128 Y-DLMNVNWFVFRA 140 (142)
T ss_dssp S-CCCEEEEEEEEC
T ss_pred c-ceEEEEEEEEEe
Confidence 1 136788888874
No 40
>2v4v_A GH59 galactosidase; hydrolase, family 6 carbohydrate binding module, CCCBM6; HET: XYP; 1.50A {Clostridium cellulolyticum}
Probab=71.98 E-value=21 Score=31.36 Aligned_cols=79 Identities=18% Similarity=0.281 Sum_probs=45.5
Q ss_pred ccEEEEEEEeec-cCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeeeecEEEEEeecCCC
Q 038979 509 ATYKLRVAVAAA-HGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKGNNTIYLSQPRKLD 587 (606)
Q Consensus 509 ~~~tLriala~a-~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~~ 587 (606)
+.+++.+-+|++ +++.++|++++.+.. ...+-.++...+ -..|...+.+|+ +.+|...|+|....++.
T Consensus 49 G~~~~~~rvas~~~gg~ievrlds~~G~--~~g~~~v~~Tgg------w~~~~t~~~~v~---~~~G~h~l~l~f~g~~~ 117 (129)
T 2v4v_A 49 GVGGFQARVASATSGGNIEIRLDSSTGT--LIGTCPVAGTGD------WQTYTDAKCTVS---GVTGKHDVYLVFKGDSG 117 (129)
T ss_dssp CCCEEEEEEEESSCCEEEEEEESSTTSC--EEEEEEECCCSE------EEEEEEEEEECC---CCEEEEEEEEEEECSSS
T ss_pred CeEEEEEEEEcCCCCcEEEEEECCCCCe--EEEEEEecCCCC------CceeEEEEEEEc---cCCceEEEEEEEECCCC
Confidence 455555555654 567999999976432 111112222211 123455555553 56999999999765432
Q ss_pred CCceEEEEEEEEe
Q 038979 588 AFTGIMYDYLRFE 600 (606)
Q Consensus 588 ~~~~vmyD~IrLe 600 (606)
. -+-.|.++++
T Consensus 118 ~--~~nld~~~f~ 128 (129)
T 2v4v_A 118 Y--LFNLNWFTFS 128 (129)
T ss_dssp C--CCEEEEEEEE
T ss_pred c--eEEEEEEEEE
Confidence 1 2677888775
No 41
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=71.60 E-value=3.6 Score=44.43 Aligned_cols=65 Identities=25% Similarity=0.318 Sum_probs=45.2
Q ss_pred CCeEEEEEEEEeec----cccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEeCcccCceeEEEEEEC
Q 038979 304 KRGSISGRLIVKDR----YVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSIKNVLIGNYNLYAWIP 378 (606)
Q Consensus 304 qRGtVsG~v~~sd~----~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I~nV~pGtY~L~a~~~ 378 (606)
+-++|.|.|-. |. -......|..++.|-|..+ . -..---+.||++|.|.|.+++||+|++.+-.+
T Consensus 304 G~~~igg~Vw~-D~n~nG~~D~~e~gl~gv~v~L~d~--~-------G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P 372 (429)
T 3irp_X 304 GFGGFGGYVWF-DKNNDGVQNDSNAAAAGITVNLLDP--T-------GIRLATTTTDITGHYNFDNLTNGNYLVEFVMP 372 (429)
T ss_dssp CEEEEEEEEEE-CTTSSSSSCCSSCBCTTCEEEEECT--T-------SCEEEEEECCTTSEEEEEEEESEEEEEEECCC
T ss_pred ceEEEccEEEE-eCCCCCCcCcCCCCcCCeEEEEEcC--C-------CCEEEEEEeCCCCeEEeCCCCCCcEEEEEECC
Confidence 34677788753 32 1122346788899998643 1 12234678999999999999999999988654
No 42
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=69.53 E-value=5.9 Score=35.13 Aligned_cols=55 Identities=15% Similarity=0.197 Sum_probs=38.4
Q ss_pred cCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceE----eCcccCceeEEEEEECceeceee
Q 038979 322 AGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFS----IKNVLIGNYNLYAWIPGFIGDFK 385 (606)
Q Consensus 322 ~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~----I~nV~pGtY~L~a~~~G~~G~~~ 385 (606)
.|+||.++.|-|.....++.|+. -.-..||+||+.. -..+.+|.|+|..- .|+|.
T Consensus 12 ~G~PAagv~V~L~~~~~~~~~~~-----l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~----tg~Yf 70 (115)
T 1f86_A 12 RGSPAINVAVHVFRKAADDTWEP-----FASGKTSESGELHGLTTEEEFVEGIYKVEID----TKSYW 70 (115)
T ss_dssp TTEECTTCEEEEEEECTTSCEEE-----EEEEECCTTSEECCSCCTTTCCSEEEEEEEC----HHHHH
T ss_pred CCCcCCCCEEEEEEcCCCCCcEE-----EEEeecCCCccccCcCCCCCCcceEEEEEEE----hhHhH
Confidence 39999999999965322223542 3346789999873 34578999999986 55554
No 43
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=68.03 E-value=8.1 Score=34.34 Aligned_cols=58 Identities=22% Similarity=0.267 Sum_probs=41.5
Q ss_pred CCeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEe---CcccCceeEEEEE
Q 038979 304 KRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSI---KNVLIGNYNLYAW 376 (606)
Q Consensus 304 qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I---~nV~pGtY~L~a~ 376 (606)
+-+.++=.|+-.- .|.||.++.|-|... + ..-.-+.||+||+... ..+.||+|+|..-
T Consensus 8 ~M~~lstHVLDt~-----~G~PAagv~V~L~~~--------~--~~l~~~~Tn~DGR~~~l~~~~~~~G~Y~L~F~ 68 (116)
T 3qva_A 8 HMSTLSTHILDIS-----TGTPAEGVTVSLSRE--------G--ETLANLVTNAQGRIATFSAAPLPAGRYCLTAE 68 (116)
T ss_dssp -CBCEEEEEEETT-----TTEECTTCEEEEEET--------T--EEEEEEECCTTSEECCSCSSCBCSSEEEEEEC
T ss_pred ccCCeeeEEeecC-----CCcCCCCCEEEEEEc--------c--EeEEEeccCCCCCccccccccCCCceEEEEEe
Confidence 3466888876544 399999999999533 1 2234467999998642 4578999999986
No 44
>1uxx_X Xylanase U; carbohydrate binding module, CBM6, xylopentaose binding, xylan degradation; HET: XYP; 1.6A {Clostridium thermocellum} SCOP: b.18.1.10 PDB: 1gmm_A*
Probab=65.78 E-value=35 Score=30.22 Aligned_cols=78 Identities=19% Similarity=0.351 Sum_probs=46.2
Q ss_pred ccEEEEEEEeec--cCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeeeecEEEEEeecCC
Q 038979 509 ATYKLRVAVAAA--HGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKGNNTIYLSQPRKL 586 (606)
Q Consensus 509 ~~~tLriala~a--~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~ 586 (606)
+.+++.+-+|+. .++.++|++++.+.. +..+-.++... +. -.|...+.+|+ +.+|...|+|.. .|
T Consensus 51 G~~~~~~rvas~~~~gg~ievr~ds~~G~--~~gt~~v~~Tg-----gw-~~~~~~~~~v~---~~~G~h~l~l~f-~G- 117 (133)
T 1uxx_X 51 GANSFKARVASGADTPTNIQLRLGSPTGT--LIGTLTVASTG-----GW-NNYEEKSCSIT---NTTGQHDLYLVF-SG- 117 (133)
T ss_dssp CEEEEEEEEEECCSSCEEEEEEESSTTSE--EEEEEEECCCS-----EE-EEEEEEEEEEE---EECSEEEEEEEE-SS-
T ss_pred CcEEEEEEEEeCCCCCcEEEEEECCCCCc--EEEEEEeCCCC-----CC-ceEEEEEEEEc---cCCcEEEEEEEE-EC-
Confidence 566666666664 356999999986432 11111222221 11 13455555554 468999999976 45
Q ss_pred CCCceEEEEEEEEecCC
Q 038979 587 DAFTGIMYDYLRFEGPD 603 (606)
Q Consensus 587 ~~~~~vmyD~IrLe~p~ 603 (606)
.+-.|.++++.+.
T Consensus 118 ----~~nl~~~~f~~~g 130 (133)
T 1uxx_X 118 ----PVNIDYFIFDSNG 130 (133)
T ss_dssp ----CCEEEEEEEECC-
T ss_pred ----CcEEEEEEEEcCC
Confidence 3778999988654
No 45
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=65.45 E-value=3.7 Score=48.72 Aligned_cols=71 Identities=18% Similarity=0.140 Sum_probs=43.6
Q ss_pred EEEEEEecCccccccEEEEEEEeecc--C--CeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCce
Q 038979 496 WQIQFKLEGVVKKATYKLRVAVAAAH--G--AELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVL 571 (606)
Q Consensus 496 w~I~F~L~~~~~~~~~tLriala~a~--~--~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L 571 (606)
.+=.|+|+.... ....|.|-+..-. . .+-+|.|||+.+.. .+ -..+-.-.|.||+++|
T Consensus 855 yr~~f~L~~p~g-~d~pl~L~lg~~~~~~~~~~~~~~VNG~~iGr----y~-------------~~~~pqr~y~VP~giL 916 (971)
T 1tg7_A 855 YSTSFDLDLPSG-YDIPLYFNFGNSTSTPAAYRVQLYVNGYQYGK----YV-------------NNIGPQTSFPVPEGIL 916 (971)
T ss_dssp EEEEEECCCCTT-EECCEEEEECCCCSSCCCEEEEEEETTEEEEE----EE-------------TTTCSCCEEEECBTTB
T ss_pred EEEEEeccCCCC-CCceEEEEcCCCCCCCccceEEEEECCEEEee----ec-------------CCCCCCEEEECCHHHh
Confidence 355788765421 2223444332211 1 38999999987652 10 0111234689999999
Q ss_pred -eeeecEEEEEeec
Q 038979 572 -RKGNNTIYLSQPR 584 (606)
Q Consensus 572 -~~G~NtI~l~~~~ 584 (606)
++|.|+|.|++..
T Consensus 917 n~~G~N~i~vrv~~ 930 (971)
T 1tg7_A 917 NYHGTNWLALSLWA 930 (971)
T ss_dssp CTTSEEEEEEEEEE
T ss_pred CcCCccEEEEEEec
Confidence 9999999998755
No 46
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=63.29 E-value=9.2 Score=39.93 Aligned_cols=47 Identities=17% Similarity=0.202 Sum_probs=34.1
Q ss_pred cCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEeCcccCceeEEEEE
Q 038979 322 AGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSIKNVLIGNYNLYAW 376 (606)
Q Consensus 322 ~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I~nV~pGtY~L~a~ 376 (606)
.+.+..+|...|... ++....--..||++|.++|.++++|+|.|.=.
T Consensus 18 ~~~~L~GA~F~l~~~--------~g~~~~~~~tTd~~G~~~~~~L~~G~Y~~~Et 64 (355)
T 3kpt_A 18 NEKAMAGAVFSLFKK--------DGTEVKKELATDANGHIRVQGLEYGEYYFQET 64 (355)
T ss_dssp GGCBCCSCEEEEEET--------TSCEEEEEEECCTTSEEEEEEEESEEEEEEEE
T ss_pred CCCCcCCcEEEEEEC--------CCCEEEEEEEECCCCeEEECCcCCceEEEEEE
Confidence 478888888888532 11111223468999999999999999998754
No 47
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=59.90 E-value=6.7 Score=44.75 Aligned_cols=69 Identities=23% Similarity=0.262 Sum_probs=47.7
Q ss_pred eEEEEEEecCccccccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeee
Q 038979 495 TWQIQFKLEGVVKKATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKG 574 (606)
Q Consensus 495 ~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 574 (606)
-.+=.|.+++........|++.. ......|.|||+.+.. -.|-+..++|+|+ ..|+.|
T Consensus 63 wYr~~f~~p~~~~~~~~~L~f~g---v~~~a~V~vNG~~vg~------------------~~~g~~~f~~dIt-~~l~~G 120 (692)
T 3fn9_A 63 YYRKTQFFPHDLEGKRVFLRFEG---VGACAEVYVNGKLAGT------------------HKGGYSAFACEIG-TALKLG 120 (692)
T ss_dssp EEEEEEEECGGGTTCEEEEEESC---CBSEEEEEETTEEEEE------------------EECTTSCEEEECG-GGCCTT
T ss_pred EEEEEEEECchhCCCeEEEEECC---ccEeeEEEECCEEeee------------------EcCCcceEEEECh-HhcCCC
Confidence 34567888765443334555543 4467789999985430 1255678899998 788998
Q ss_pred -ecEEEEEeecC
Q 038979 575 -NNTIYLSQPRK 585 (606)
Q Consensus 575 -~NtI~l~~~~g 585 (606)
+|+|.+.+.+.
T Consensus 121 ~~N~l~V~v~~~ 132 (692)
T 3fn9_A 121 AENEIIVKADNK 132 (692)
T ss_dssp EEEEEEEEEECC
T ss_pred CceEEEEEEECC
Confidence 89999998664
No 48
>4hg6_B Cellulose synthase subunit B; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=57.91 E-value=14 Score=42.20 Aligned_cols=77 Identities=22% Similarity=0.327 Sum_probs=52.8
Q ss_pred eEEEEEEecCccc---cccEEEEEEEeec----cCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEee
Q 038979 495 TWQIQFKLEGVVK---KATYKLRVAVAAA----HGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVP 567 (606)
Q Consensus 495 ~w~I~F~L~~~~~---~~~~tLriala~a----~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ip 567 (606)
.-.|.|.|..+.- .....|.|..+-+ ..+++.|.|||+-+.. ..+.+.. .|....+++.||
T Consensus 319 ~i~V~FrLPPDLfvw~~tga~L~L~YRYSp~l~~~S~L~VsLNgqfV~S-----lPL~~~~-------~g~~~~~~IpLP 386 (707)
T 4hg6_B 319 NRDIDFQLPDDWLLLASQKAQIGIDYGFAGGLPEGALLLVKVNGTTVRM-----LPLDRDA-------APVKPRLDIRFP 386 (707)
T ss_dssp EEEEEEECCSSCCCCSSCEEEEEECEEECSSCCTTCEEEEEETTEEEEE-----EESSSCC-------BSSCCCEEEEEE
T ss_pred CceeEEeCCCCeecccCCCceEEEEEecCCCCCCCCeEEEEECCEEEEE-----EEcCccc-------CCccceeEeecC
Confidence 4678888877662 2346666666654 4589999999985531 1122211 244567899999
Q ss_pred cCceeeeecEEEEEee
Q 038979 568 GKVLRKGNNTIYLSQP 583 (606)
Q Consensus 568 a~~L~~G~NtI~l~~~ 583 (606)
+.+|+.|.|.|.|...
T Consensus 387 p~ll~~g~NqL~FeF~ 402 (707)
T 4hg6_B 387 ARLLHPGPNRLSFESV 402 (707)
T ss_dssp GGGCCSSEEEEEEEEE
T ss_pred HHHcCCCCceEEEEEE
Confidence 9999889999999864
No 49
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=57.79 E-value=50 Score=27.50 Aligned_cols=50 Identities=20% Similarity=0.246 Sum_probs=33.3
Q ss_pred cCcccCceEEEecCCCCCCCcccccccceeE----EEeCCCcceEeCcccCceeEEEEEECceec
Q 038979 322 AGIAAKGAYVGLAKPGRAGSWQTECKGYQFW----TVANEGGNFSIKNVLIGNYNLYAWIPGFIG 382 (606)
Q Consensus 322 ~~~pa~~a~V~La~~~~~g~~q~~~~~yqyw----t~td~~G~F~I~nV~pGtY~L~a~~~G~~G 382 (606)
.|+|+.+|.|-+. +. |. ..|. ..||++|.|++. +=-|+-.+.|.-.|..|
T Consensus 11 ~GkPV~gA~Vefe-------~y--Ny-ae~~~~~~~~TD~~G~~s~~-~G~Gd~~v~A~k~G~~g 64 (82)
T 3e8v_A 11 EGQPVADATVEFK-------VY--NY-AEFYTVATKHTDRSGHASLT-AGKGDMLVWASKDGRFG 64 (82)
T ss_dssp TSCBCTTCEEEEE-------EE--ET-TEEEEEEEEECCTTSEEEEE-CCSEEEEEEEEETTEEE
T ss_pred CCCCCCCCEEEEE-------EE--Ec-hheeEEEEEEECCCceEEEE-EcCCceEEEeccCCEEE
Confidence 4999999999873 33 22 2333 357999999995 44466666666555554
No 50
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=56.25 E-value=28 Score=40.89 Aligned_cols=79 Identities=14% Similarity=0.148 Sum_probs=49.4
Q ss_pred CeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccccc-eeEEEeCCCcceEeCcccCceeEEEEEE--Ccee
Q 038979 305 RGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGY-QFWTVANEGGNFSIKNVLIGNYNLYAWI--PGFI 381 (606)
Q Consensus 305 RGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~y-qywt~td~~G~F~I~nV~pGtY~L~a~~--~G~~ 381 (606)
.|+|+-+= .| ..+.|.++|..-|.... .+. ..-..||++|.++|.+++||+|+|.=-- .|+.
T Consensus 47 ~G~~~i~K--~d----~~~~~L~GA~F~l~~~~---------~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~Et~AP~GY~ 111 (893)
T 2ww8_A 47 IGKVVIKE--TG----EGGALLGDAVFELKNNT---------DGTTVSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYK 111 (893)
T ss_dssp CEEEEEEE--EC----STTCBCCCCEEEEEETT---------TCCEEEEECCTTTCEEEEEEECSEEEEEEEEECCTTBC
T ss_pred eEEEEEEE--EC----CCCCccCCCEEEEEECC---------CCeEEEEEEECCCCeEEECCCCCCcEEEEEccCCCcee
Confidence 56665432 22 34788999988775431 112 2224589999999999999999998763 3433
Q ss_pred ceeeeeeEEEEeCCceee
Q 038979 382 GDFKYHAAIRITAGSAKQ 399 (606)
Q Consensus 382 G~~~~~~~VtV~aG~t~~ 399 (606)
-+ ...-.|+|++...+.
T Consensus 112 l~-~~~~~v~v~~~g~~~ 128 (893)
T 2ww8_A 112 PS-TKQWTVEVEKNGRTT 128 (893)
T ss_dssp CC-CCEEEEEECTTCCEE
T ss_pred cC-CccEEEEECCCceEE
Confidence 11 123457777555443
No 51
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=56.11 E-value=2.4 Score=50.64 Aligned_cols=85 Identities=20% Similarity=0.253 Sum_probs=0.0
Q ss_pred EEEEEecCccccccEEEEEEEeecc--CCeEEEEEcCccC-CCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceee
Q 038979 497 QIQFKLEGVVKKATYKLRVAVAAAH--GAELQVRVNSRSA-RRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRK 573 (606)
Q Consensus 497 ~I~F~L~~~~~~~~~tLriala~a~--~~~~~V~vNg~~~-~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~ 573 (606)
.|.|++.. +.+|.|+|+|-.|... ...+.|.|||... ..-.| +... +.. .+...++.| .|++
T Consensus 945 ~v~~~V~v-~~aG~Y~l~iryan~~~~~r~~~l~VNG~~~~~~v~~-----~~Tg-----~W~-~w~~~~~~v---~L~a 1009 (1032)
T 2vzs_A 945 SVEWTVTV-PSAGTYDVVVRYANGTTTSRPLDFSVNGSISASGVAF-----GSTG-----TWP-AWTTKTVRV---TLAA 1009 (1032)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEC-CCCeEEEEEEEEEcCCCCCeeEEEEECCeEeeeEEEe-----cCCC-----CCC-ccEEEEEEE---EECC
Confidence 35666543 4458999999988753 4679999999763 21111 1110 111 133333333 3899
Q ss_pred eecEEEEEeecCCCCCceEEEEEEEE
Q 038979 574 GNNTIYLSQPRKLDAFTGIMYDYLRF 599 (606)
Q Consensus 574 G~NtI~l~~~~g~~~~~~vmyD~IrL 599 (606)
|.|+|+|....+ .+ ++=.|+|.+
T Consensus 1010 G~NtI~~~~~~~-~g--~~niD~i~v 1032 (1032)
T 2vzs_A 1010 GVNKIKAVATTA-NG--GPNVDKITL 1032 (1032)
T ss_dssp --------------------------
T ss_pred CceEEEEEEcCC-cC--ceEEEEEEC
Confidence 999999986422 22 466677754
No 52
>2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A*
Probab=55.00 E-value=7.9 Score=34.66 Aligned_cols=63 Identities=19% Similarity=0.302 Sum_probs=43.8
Q ss_pred eEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcce-----EeCcccCceeEEEEEECce
Q 038979 306 GSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNF-----SIKNVLIGNYNLYAWIPGF 380 (606)
Q Consensus 306 GtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F-----~I~nV~pGtY~L~a~~~G~ 380 (606)
+.++=.|+-.- .|+||.++.|-|.... |+ ...-+.||+||+. .-..+.+|.|+|..-
T Consensus 9 ~~lstHVLDt~-----~G~PAagv~V~L~~~~----~~-----~l~~~~Tn~DGR~~~~~~~~~~~~~G~Y~l~F~---- 70 (121)
T 2h0e_A 9 GKLTTHILDLT-----CGKPAANVKIGLKRLG----ES-----IMKEVYTNNDGRVDVPLLAGEELMSGEYVMEFH---- 70 (121)
T ss_dssp CEEECCEEETT-----TTEECTTCEEEEEETT----SC-----CCEEEECCTTSSCSSCSEEGGGCCSEEEEEEEC----
T ss_pred CCeeEEEecCC-----CcCCCCCCEEEEEECC----ce-----EEEEEecCCCCCccCCcCCCCCcCceEEEEEEE----
Confidence 45666665443 3999999999996431 44 2345779999986 334688999999986
Q ss_pred eceeee
Q 038979 381 IGDFKY 386 (606)
Q Consensus 381 ~G~~~~ 386 (606)
.|+|..
T Consensus 71 tg~Yf~ 76 (121)
T 2h0e_A 71 AGDYFA 76 (121)
T ss_dssp HHHHHH
T ss_pred hHHhHh
Confidence 565543
No 53
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=52.62 E-value=17 Score=32.15 Aligned_cols=52 Identities=17% Similarity=0.134 Sum_probs=30.3
Q ss_pred CCeEEEEEEEEeeccccccCcccC--ceEEEecCCCCCCCcccccccceeEEEeCCCcceEeCc
Q 038979 304 KRGSISGRLIVKDRYVSRAGIAAK--GAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSIKN 365 (606)
Q Consensus 304 qRGtVsG~v~~sd~~~~~~~~pa~--~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I~n 365 (606)
|--.|+|+|+= . +.||+ ++.|.|-+.... . .+....---+.||++|+|+|..
T Consensus 3 qsV~V~G~L~C-~------~~Pa~~~~V~V~L~d~~~~-~--~d~Ddll~~~~Td~~G~F~l~G 56 (117)
T 3uaf_A 3 SCLMATGVLKC-P------TDPEAVKKVHIDLWDAAAA-A--AESDDLMGRTWSDRNGNFQVTG 56 (117)
T ss_dssp EEEEEEEEEEC-T------TCGGGGSSCEEEEEEHHHH-H--TTSCCEEEEEECCTTSEEEEEE
T ss_pred EEEEEEEEEEe-C------CccCCCCCEEEEEEecccc-c--CCchHhheeeEECCCCEEEEEE
Confidence 34579999964 3 57865 678877320000 0 0112222236789999999863
No 54
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=52.46 E-value=3.5 Score=37.74 Aligned_cols=67 Identities=16% Similarity=0.326 Sum_probs=45.3
Q ss_pred CeEEEEEEEEeeccccccCcccCceEEEecCCCC-CCCcccccccceeEEEeCCCcceE--e--CcccCceeEEEEEECc
Q 038979 305 RGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGR-AGSWQTECKGYQFWTVANEGGNFS--I--KNVLIGNYNLYAWIPG 379 (606)
Q Consensus 305 RGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~-~g~~q~~~~~yqywt~td~~G~F~--I--~nV~pGtY~L~a~~~G 379 (606)
++.++=.|+-.- .|.||.++.|-|..... .+.|.. -.-+.||+||+.. + ..+.||+|+|..-
T Consensus 25 ~~~LTtHVLDt~-----~G~PAagv~V~L~~~~~~~~~w~~-----l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~--- 91 (138)
T 3iwv_A 25 LSPLSTHVLNIA-----QGVPGANMTIVLHRLDPVSSAWNI-----LTTGITNDDGRCPGLITKENFIAGVYKMRFE--- 91 (138)
T ss_dssp -CCEECCEEETT-----TTEECTTCEEEEEEECSSSCCEEE-----EEEEECCTTSCCTTSSCTTTCCSEEEEEEEC---
T ss_pred CCCceEEEeecC-----CccCCCCCEEEEEEECCCCCCcEE-----EEEEecCCCCCcCCccCcccCCCceEEEEEe---
Confidence 577887775444 39999999999964321 234441 2335799999864 2 3578999999987
Q ss_pred eeceee
Q 038979 380 FIGDFK 385 (606)
Q Consensus 380 ~~G~~~ 385 (606)
.|+|.
T Consensus 92 -tg~Yf 96 (138)
T 3iwv_A 92 -TGKYW 96 (138)
T ss_dssp -HHHHH
T ss_pred -hHHHH
Confidence 55554
No 55
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=51.30 E-value=11 Score=44.91 Aligned_cols=67 Identities=21% Similarity=0.257 Sum_probs=45.3
Q ss_pred EEEEEEecCcc--cc-ccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCcee
Q 038979 496 WQIQFKLEGVV--KK-ATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLR 572 (606)
Q Consensus 496 w~I~F~L~~~~--~~-~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~ 572 (606)
.+=.|++++.. .. ....|++.-+ .....|.|||+.+.. -.|-+..++|+|. ..|+
T Consensus 122 Yrr~F~vp~~~~~~g~~rv~L~F~gv---~~~a~V~vNG~~VG~------------------~~gg~~p~~~DIT-~~Lk 179 (1024)
T 1yq2_A 122 FRRRFDVPAQWFESTTAALTLRFDGV---ESRYKVWVNGQEIGV------------------GSGSRLAQEFDVS-DALR 179 (1024)
T ss_dssp EEEEEEECGGGGSTTEEEEEEEESCE---ESCEEEEETTEEEEE------------------ECCTTSCEEEECT-TTCC
T ss_pred EEEEeEECchHhcCCCceEEEEECCC---CceEEEEECCEEEEE------------------EeCCccceEEecH-Hhcc
Confidence 45578887654 32 2344555433 345789999985430 1255677899998 6789
Q ss_pred eeecEEEEEeec
Q 038979 573 KGNNTIYLSQPR 584 (606)
Q Consensus 573 ~G~NtI~l~~~~ 584 (606)
.|+|+|.+.+.+
T Consensus 180 ~G~N~L~V~V~~ 191 (1024)
T 1yq2_A 180 AGSNLLVVRVHQ 191 (1024)
T ss_dssp SEEEEEEEEEES
T ss_pred CCCcEEEEEEEe
Confidence 999999999964
No 56
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A
Probab=51.23 E-value=12 Score=41.78 Aligned_cols=66 Identities=21% Similarity=0.197 Sum_probs=44.8
Q ss_pred EEEEEEecCccccccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEE-eecEEEEEEeecCceeee
Q 038979 496 WQIQFKLEGVVKKATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIH-GVYKLFNVDVPGKVLRKG 574 (606)
Q Consensus 496 w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~-G~~~~~~~~ipa~~L~~G 574 (606)
.+-.|.+++........|++.. ....-.|.|||+.+. .| |-+..++|+|+ ..|+.|
T Consensus 71 Y~~~f~~p~~~~~~~~~L~f~g---v~~~a~V~vNG~~vg-------------------~~~~~~~p~~~dit-~~l~~G 127 (605)
T 3lpf_A 71 YQREVFIPKGWAGQRIVLRFDA---VTHYGKVWVNNQEVM-------------------EHQGGYTPFEADVT-PYVIAG 127 (605)
T ss_dssp EEEEEECCTTCSSCEEEEEESC---CBSEEEEEESSCEEE-------------------EECCSSSCEEEECG-GGCCTT
T ss_pred EEEEEECCcccCCCEEEEEECC---cceEEEEEECCEEEE-------------------EEcCCCCcceeech-hhccCC
Confidence 4557888765443334455543 346678999998553 22 55667899998 788899
Q ss_pred ec-EEEEEeec
Q 038979 575 NN-TIYLSQPR 584 (606)
Q Consensus 575 ~N-tI~l~~~~ 584 (606)
+| +|++.+.+
T Consensus 128 ~nn~l~V~v~n 138 (605)
T 3lpf_A 128 KSVRITVCVNN 138 (605)
T ss_dssp SEEEEEEEEEC
T ss_pred CeEEEEEEEec
Confidence 76 89998843
No 57
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=51.07 E-value=10 Score=42.84 Aligned_cols=68 Identities=15% Similarity=0.227 Sum_probs=46.1
Q ss_pred eEEEEEEecCccccccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeee
Q 038979 495 TWQIQFKLEGVVKKATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKG 574 (606)
Q Consensus 495 ~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 574 (606)
..+=.|.+++........|++.- ......|.|||+.+. .-.|-+..++|+|.. .|+.|
T Consensus 52 wYr~~f~~p~~~~~~~~~L~f~g---v~~~a~V~vNG~~vg------------------~~~~~~~~~~~dit~-~l~~G 109 (667)
T 3cmg_A 52 NYEKALYIRPEWKGKRLFLRFDG---VNSIADVFINRKHIG------------------EHRGGYGAFIFEITD-LVKYG 109 (667)
T ss_dssp EEEEEEECCGGGTTSEEEEEESC---CBSEEEEEETTEEEE------------------EEECSSSCEEEECTT-TSCTT
T ss_pred EEEEEEECCcccCCCEEEEEECC---ccceeEEEECCEEEe------------------eecCCcccEEEECCH-HHCCC
Confidence 34567888764432334555543 345678999998543 012556778999986 68888
Q ss_pred -ecEEEEEeec
Q 038979 575 -NNTIYLSQPR 584 (606)
Q Consensus 575 -~NtI~l~~~~ 584 (606)
+|+|.+.+.+
T Consensus 110 ~~N~l~V~v~~ 120 (667)
T 3cmg_A 110 EKNSVLVRANN 120 (667)
T ss_dssp SEEEEEEEEEC
T ss_pred CCcEEEEEEec
Confidence 8999999865
No 58
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=49.74 E-value=46 Score=32.41 Aligned_cols=73 Identities=16% Similarity=0.178 Sum_probs=44.6
Q ss_pred cccCceEEEecCCCCCCCc-ccccccc-------eeEEEeCCCcceEeCcccCceeEEEEE-ECceeceee--eeeEEEE
Q 038979 324 IAAKGAYVGLAKPGRAGSW-QTECKGY-------QFWTVANEGGNFSIKNVLIGNYNLYAW-IPGFIGDFK--YHAAIRI 392 (606)
Q Consensus 324 ~pa~~a~V~La~~~~~g~~-q~~~~~y-------qywt~td~~G~F~I~nV~pGtY~L~a~-~~G~~G~~~--~~~~VtV 392 (606)
.+..+|...|... +|.. .....++ .--..||++|.|+|.++++|+|.|.=- ++ .|... ..-.|+|
T Consensus 141 ~~L~GA~F~l~~~--~g~~~~~~~~g~~~~~~~~~~~~~Td~~G~~~~~~L~~G~Y~l~EtkAP--~GY~l~~~~~~f~i 216 (239)
T 2pz4_A 141 KPLAGVVFELYEK--NGRTPIRVKNGVHSQDIDAAKHLETDSSGHIRISGLIHGDYVLKEIETQ--SGYQIGQAETAVTI 216 (239)
T ss_dssp EECCSCEEEEEET--TCSSCBCEETTEECCSTTCBSCEECCTTSEEEEEEEESEEEEEEEEECC--TTBCCCCSEEEEEE
T ss_pred cccCCCEEEEEeC--CCCEEEeecccceecccccceEEEECCCCeEEECCCCCceEEEEEEECC--CCcCcCCccEEEEE
Confidence 6788888887643 1111 1000010 012358999999999999999997654 43 23222 2346889
Q ss_pred eCCceeee
Q 038979 393 TAGSAKQI 400 (606)
Q Consensus 393 ~aG~t~~l 400 (606)
++++++.+
T Consensus 217 ~~~~~~~~ 224 (239)
T 2pz4_A 217 EKSKTVTV 224 (239)
T ss_dssp CTTSEEEE
T ss_pred eCCCeEEE
Confidence 98886554
No 59
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=49.69 E-value=70 Score=32.04 Aligned_cols=34 Identities=6% Similarity=0.089 Sum_probs=29.1
Q ss_pred EEEEeCCeEEEEEeCCceeEEEEEE--cCEEecccc
Q 038979 13 HVVMNNGILQVSISTPQGFVIGIQY--KGNKNLLNV 46 (606)
Q Consensus 13 ~vv~~Ng~l~vtv~k~~g~itsl~y--~G~e~l~~~ 46 (606)
.++|.|+.++++|..-+|.|+||+. +|.|.++..
T Consensus 2 ~~~l~n~~~~~~i~~~Ga~l~s~~~~~~g~e~l~~~ 37 (294)
T 3q1n_A 2 MITIENSKFKAGIAERGAELQSLVNKADNYEYVWTG 37 (294)
T ss_dssp EEEEECSSEEEEEETBTTEEEEEEETTTTEECBCCC
T ss_pred EEEEECCCEEEEEEccCcEEEEEEeCCCCCEEEEcC
Confidence 4789999999999998999999999 488877643
No 60
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=49.55 E-value=28 Score=30.92 Aligned_cols=64 Identities=17% Similarity=0.275 Sum_probs=38.5
Q ss_pred cCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEeCcccCceeEEEEE-EC-ceeceeeeeeEEEEeCCcee
Q 038979 322 AGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSIKNVLIGNYNLYAW-IP-GFIGDFKYHAAIRITAGSAK 398 (606)
Q Consensus 322 ~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I~nV~pGtY~L~a~-~~-G~~G~~~~~~~VtV~aG~t~ 398 (606)
.+.+..+|..-|... + ++-.+=|+ ++|.+.|.+++||+|.|.=- +| |+.- ...-.++|++...+
T Consensus 38 ~g~~L~GA~F~l~~~--~------g~~v~~~~---sdG~~~~~~L~~G~Y~l~EtkAP~GY~l--~~~i~ftV~~~g~v 103 (121)
T 2x5p_A 38 DGKELAGATMELRDS--S------GKTISTWI---SDGQVKDFYLMPGKYTFVETAAPDGYEV--ATAITFTVNEQGQV 103 (121)
T ss_dssp TCCBCCCCEEEEECT--T------SCEEEEEE---CCSSCEEEEECSEEEEEEEEECCTTCCC--CCCEEEEECTTCCE
T ss_pred CCCCcCCCEEEEEEC--C------CCEEEEEE---eCCEEEEcccCCcEEEEEEEeCCCCccc--CCCEEEEEcCCceE
Confidence 367888888777543 1 11123354 47999999999999999755 32 3221 12334666654433
No 61
>1uy4_A Endo-1,4-beta-xylanase A; carbohydrate-binding module, thermodynamics, protein structure, protein-carbohydrate interactions; HET: XYP; 1.69A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1uy1_A* 1uy3_A* 1uy2_A*
Probab=48.81 E-value=65 Score=29.00 Aligned_cols=76 Identities=17% Similarity=0.241 Sum_probs=45.7
Q ss_pred ccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeeeecEEEEEeecCCCC
Q 038979 509 ATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKGNNTIYLSQPRKLDA 588 (606)
Q Consensus 509 ~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~~~ 588 (606)
+.+++.+-+|++.++.++|++++.... +..+-.++...+ --.|...+.+|+ +.+|...|+|.. .|
T Consensus 68 G~~~~~~rvas~~gg~ievrlds~~G~--~lgt~~v~~Tgg------w~~w~tv~~~v~---~~~G~h~lyl~f-~g--- 132 (145)
T 1uy4_A 68 GATGFSATVATEVNTSIQIRSDSPTGT--LLGTLYVSSTGS------WNTYNTVSTNIS---KITGVHDIVLVF-SG--- 132 (145)
T ss_dssp CEEEEEEEEECSSCEEEEEEESSTTSC--EEEEEEECCCSS------TTCCEEEEEEEE---EECSEEEEEEEE-SS---
T ss_pred CCEEEEEEEEeCCCcEEEEEECCCCCc--EEEEEEecCCCC------CcccEEEEEEec---CCCceEEEEEEE-eC---
Confidence 556666666666678999999986432 111111221110 113555555554 368999999976 44
Q ss_pred CceEEEEEEEEec
Q 038979 589 FTGIMYDYLRFEG 601 (606)
Q Consensus 589 ~~~vmyD~IrLe~ 601 (606)
.+-.|.++++.
T Consensus 133 --~~nl~~~~F~~ 143 (145)
T 1uy4_A 133 --PVNVDNFIFSR 143 (145)
T ss_dssp --CCEEEEEEEEE
T ss_pred --CeEEEEEEEEe
Confidence 37788888874
No 62
>4hg6_B Cellulose synthase subunit B; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=48.62 E-value=10 Score=43.23 Aligned_cols=73 Identities=16% Similarity=0.233 Sum_probs=50.5
Q ss_pred eEEEEEEecCccccccEEEEEEEeec-----cCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecC
Q 038979 495 TWQIQFKLEGVVKKATYKLRVAVAAA-----HGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGK 569 (606)
Q Consensus 495 ~w~I~F~L~~~~~~~~~tLriala~a-----~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~ 569 (606)
.-.+.|.++.+. ..++|+|..+.+ ..+.++|.|||+.+.. . .+..... -...+|+||+
T Consensus 62 ~~~~~f~l~~vV--t~A~L~L~Yt~SPsLlPe~S~LkV~LNge~VGt--l---pl~~~~~---------~~~~~i~Ipp- 124 (707)
T 4hg6_B 62 RAAFRLFLPTEA--VGGTLTLAQRSSIDILPESSQIIVRMNDQEIGR--F---TPRQFGA---------LGAVTMPLGE- 124 (707)
T ss_dssp EEEEEEECSSCC--TTCCBBCEEECSSCCCBTTBEEEEEETTEEEEE--E---CCCCCSS---------CCCBCCCCCS-
T ss_pred ceeEEEEccchh--eeEEEEEEEeeCccccCccceEEEEECCEEEEE--E---ecCCCCC---------ceeEEEecCh-
Confidence 466778887733 457777777765 4578999999986642 0 1222111 2445999998
Q ss_pred ceeeeecEEEEEeec
Q 038979 570 VLRKGNNTIYLSQPR 584 (606)
Q Consensus 570 ~L~~G~NtI~l~~~~ 584 (606)
.|..|.|.|.|....
T Consensus 125 ~l~~gfN~L~fe~ig 139 (707)
T 4hg6_B 125 AVRAGDNLVTIEAQH 139 (707)
T ss_dssp SSCSSEEEEEEEEEC
T ss_pred HHcCCcceEEEEEcC
Confidence 899999999999754
No 63
>1od3_A Putative xylanase; hydrolase, carbohydrate binding module, beta-sandwich, laminaribiose; HET: BGC; 1.0A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1nae_A* 1o8s_A* 1o8p_A
Probab=48.02 E-value=67 Score=29.78 Aligned_cols=77 Identities=21% Similarity=0.302 Sum_probs=47.6
Q ss_pred ccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeeeecEEEEEeecCCCC
Q 038979 509 ATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKGNNTIYLSQPRKLDA 588 (606)
Q Consensus 509 ~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~~~ 588 (606)
+.+++.+-+|++.++.++|++++.+.. ...+-.++...+ --.|...+.+|+ +.+|...|+|.. .|
T Consensus 90 G~~~~~~rvas~~~G~ievrlds~~G~--~lgt~~vp~Tgg------w~~w~tvt~~v~---~~~G~hdLylvf-~G--- 154 (168)
T 1od3_A 90 GATSVTARVATQNATTIQVRLGSPSGT--LLGTIYVGSTGS------FDTYRDVSATIS---NTAGVKDIVLVF-SG--- 154 (168)
T ss_dssp CEEEEEEEEECSSCEEEEEEESSTTSC--EEEEEEECCCSS------TTCCEEEEEEEE---EECSEEEEEEEE-SS---
T ss_pred CcEEEEEEEEcCCCcEEEEEECCCCCc--EEEEEEeCCCCC------CcccEEEEEEEc---CCCcEEEEEEEE-EC---
Confidence 567777777776678999999986532 111111221110 013566666664 468999999976 44
Q ss_pred CceEEEEEEEEecC
Q 038979 589 FTGIMYDYLRFEGP 602 (606)
Q Consensus 589 ~~~vmyD~IrLe~p 602 (606)
.+-.|.++++..
T Consensus 155 --~~nldw~~F~~~ 166 (168)
T 1od3_A 155 --PVNVDWFVFSKS 166 (168)
T ss_dssp --CCEEEEEEEECC
T ss_pred --CcEEEEEEEEeC
Confidence 377888888753
No 64
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=47.85 E-value=12 Score=44.74 Aligned_cols=67 Identities=22% Similarity=0.169 Sum_probs=45.9
Q ss_pred EEEEEEecCccccccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeeee
Q 038979 496 WQIQFKLEGVVKKATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKGN 575 (606)
Q Consensus 496 w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 575 (606)
.+=.|++++........|++..+ .....|.|||+.+.. -.|-+..++|+|.. .|+.|+
T Consensus 130 Yrr~F~vp~~~~g~~v~L~F~gv---~~~a~V~vNG~~vG~------------------~~gg~~p~~~DIT~-~L~~G~ 187 (1010)
T 3bga_A 130 YRRTFKVPADWKGRRVVLCCEGV---ISFYYVWVNGKLLGY------------------NQGSKTAAEWDITD-VLSEGE 187 (1010)
T ss_dssp EEEEEECCGGGTTSEEEEEESCE---ESEEEEEETTEEEEE------------------EECSSSCEEEECGG-GCCSSE
T ss_pred EEEEeEeCcccCCCEEEEEECCC---CceeEEEECCEEEee------------------EeCCCCcceeehhh-hccCCC
Confidence 44568887654323355555433 346789999985430 12556778999984 788999
Q ss_pred cEEEEEeec
Q 038979 576 NTIYLSQPR 584 (606)
Q Consensus 576 NtI~l~~~~ 584 (606)
|+|.+.+.+
T Consensus 188 N~L~V~V~~ 196 (1010)
T 3bga_A 188 NVVALEVYR 196 (1010)
T ss_dssp EEEEEEEES
T ss_pred cEEEEEEEe
Confidence 999999864
No 65
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7
Probab=46.63 E-value=1.3e+02 Score=29.72 Aligned_cols=40 Identities=15% Similarity=0.151 Sum_probs=31.8
Q ss_pred ceEEEEeC--CEEEEeCCeEEEEEeCCceeEEEEEE--cCEEec
Q 038979 4 GVQLHEQN--NHVVMNNGILQVSISTPQGFVIGIQY--KGNKNL 43 (606)
Q Consensus 4 ~v~~~~~g--~~vv~~Ng~l~vtv~k~~g~itsl~y--~G~e~l 43 (606)
.|++...+ ..+++.|+.++++|..-+|.|+|++. +|.|.|
T Consensus 12 ~~~~~~~~~~~~~~l~~~~~~a~i~~~Ga~l~s~~~~~~g~e~L 55 (270)
T 1jov_A 12 ELHLVQHNDIPVLHLKHAVGTAKISLQGAQLISWKPQNAKQDVL 55 (270)
T ss_dssp TEEEEEETTEEEEEEEETTEEEEEETBTTEEEEEEETTCSSCSB
T ss_pred ceEEeeeCCceEEEEeCCCcEEEEECCCCEEEEEEECCCCceEE
Confidence 45555444 45899999999999999999999999 467777
No 66
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=44.65 E-value=16 Score=42.47 Aligned_cols=65 Identities=18% Similarity=0.259 Sum_probs=44.3
Q ss_pred EEEEEecCcc-ccccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeeee
Q 038979 497 QIQFKLEGVV-KKATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKGN 575 (606)
Q Consensus 497 ~I~F~L~~~~-~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 575 (606)
+=.|.+++.. ......|++.. ....-.|.|||+.+.. -.|-+..++|+|+. .|+.|+
T Consensus 69 r~~f~~p~~~~~~~~~~L~f~g---v~~~a~V~vNG~~vg~------------------~~~~~~~~~~dIt~-~l~~G~ 126 (848)
T 2je8_A 69 RTSFIVSEEQLNRDGIQLIFEG---LDTYADVYLNGSLLLK------------------ADNMFVGYTLPVKS-VLRKGE 126 (848)
T ss_dssp EEEEEECHHHHTSSEEEEEESC---CBSEEEEEETTEEEEE------------------ECBTTCCEEEECGG-GCCSEE
T ss_pred EEEEEcChhhcCCCeEEEEECC---CCceeEEEECCEEecc------------------ccCCCCCEEEcChH-hhcCCC
Confidence 3458886542 22335555543 3456799999985431 12557789999987 788999
Q ss_pred cEEEEEee
Q 038979 576 NTIYLSQP 583 (606)
Q Consensus 576 NtI~l~~~ 583 (606)
|+|.+.+.
T Consensus 127 N~L~V~v~ 134 (848)
T 2je8_A 127 NHLYIYFH 134 (848)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEe
Confidence 99999974
No 67
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=44.51 E-value=18 Score=41.98 Aligned_cols=67 Identities=16% Similarity=0.176 Sum_probs=46.0
Q ss_pred EEEEEEecCccccccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEE-eecEEEEEEeecCceeee
Q 038979 496 WQIQFKLEGVVKKATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIH-GVYKLFNVDVPGKVLRKG 574 (606)
Q Consensus 496 w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~-G~~~~~~~~ipa~~L~~G 574 (606)
.+=.|.+++........|++.. ......|.|||+.+. .| |-+..++|+|+. .|+.|
T Consensus 70 Yrk~f~vp~~~~~~~v~L~f~g---v~~~a~V~vNG~~vG-------------------~~~~g~~pf~~DIT~-~Lk~G 126 (801)
T 3gm8_A 70 YRKTFTIPSKWKNKKVQILFEG---VYLNSEVWINGHWLG-------------------KRPNGYISFVYDLTP-YLQEG 126 (801)
T ss_dssp EEEEEECCSGGGSCEEEEEESC---CBSCEEEEETTEEEE-------------------EECCSSCCEEEECGG-GCCSS
T ss_pred EEEEEEcCcccCCCEEEEEECc---cceEEEEEECCEEee-------------------cccCCcccEEEECcH-hccCC
Confidence 4557888765443334455443 345678999998553 22 446778999986 57899
Q ss_pred ecEEEEEeecC
Q 038979 575 NNTIYLSQPRK 585 (606)
Q Consensus 575 ~NtI~l~~~~g 585 (606)
+|+|.+.+.+.
T Consensus 127 ~N~L~V~V~n~ 137 (801)
T 3gm8_A 127 KNQIAVKVDHS 137 (801)
T ss_dssp EEEEEEEEEEC
T ss_pred CcEEEEEEECC
Confidence 99999998653
No 68
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=44.02 E-value=23 Score=42.04 Aligned_cols=68 Identities=19% Similarity=0.213 Sum_probs=42.0
Q ss_pred EEEEecCccccccEEEEEEEeecc---CCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCcee-e
Q 038979 498 IQFKLEGVVKKATYKLRVAVAAAH---GAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLR-K 573 (606)
Q Consensus 498 I~F~L~~~~~~~~~tLriala~a~---~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~-~ 573 (606)
=.|+|+-..+.-...|.+-+.... .-|.++.|||+.... +-. .++ -..+|.||.+.|. .
T Consensus 889 t~f~LdlP~~g~Dvpl~~~f~~~~~~~~yRa~lfVNG~q~Gk--yv~-~iG--------------PQt~FpvP~GILn~~ 951 (1003)
T 3og2_A 889 AKLPLHLPAQEYDIPLSFVFDNATAAAPYRALLYVNGFQYGK--YVS-NIG--------------PQTEFPVPEGILDYN 951 (1003)
T ss_dssp EEEEEECCTTTEECCEEEEECCCSSCCCEEEEEEETTEEEEE--EET-TTC--------------CCCEEEECBTTBCTE
T ss_pred EEeecCCCcccCceeEEEEECCCCCCcceEEEEEEeceeeee--ecC-CCC--------------CcceecCCcccccCC
Confidence 467764320211233444444332 359999999986542 100 111 2357999999999 8
Q ss_pred eecEEEEEe
Q 038979 574 GNNTIYLSQ 582 (606)
Q Consensus 574 G~NtI~l~~ 582 (606)
|+|+|-|++
T Consensus 952 G~Ntialal 960 (1003)
T 3og2_A 952 GDNWIGVAL 960 (1003)
T ss_dssp EEEEEEEEE
T ss_pred CcceEEEEE
Confidence 999999998
No 69
>4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus}
Probab=42.01 E-value=93 Score=30.06 Aligned_cols=64 Identities=19% Similarity=0.335 Sum_probs=39.6
Q ss_pred CeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEeCcccCceeEEEEEECc
Q 038979 305 RGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSIKNVLIGNYNLYAWIPG 379 (606)
Q Consensus 305 RGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I~nV~pGtY~L~a~~~G 379 (606)
-++++|+|.-...-+ +....++-+-|-+. +|. ..+-|.+ ....||.|+ ..+=.|+|.|..--.|
T Consensus 7 ~a~l~G~iv~tgE~i---~~~~~gv~i~l~e~----g~~--~~~~~~~-~v~qDGtf~-~~lF~G~Yki~~~~nG 70 (202)
T 4fxt_A 7 KATLTGKAIYDGEAV---GVRSGSSEFALFQD----GYA--LKGSIPV-YIAQDGSYS-VSLFNGDYKLVRMGNA 70 (202)
T ss_dssp EEEEEEEEEETTEEC---BCCTTTEEEEEECC----C------CCEEE-EBCTTSEEE-EEEESEEEEEEEEETC
T ss_pred CceEEEEEEECCCEe---eecCCceEEEEEEc----ccC--CCCCeeE-EEcCCCcEE-EEEEcceeEEEECCCC
Confidence 478999997332211 12244566776544 454 2234444 378899999 8999999999954445
No 70
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=40.44 E-value=12 Score=36.73 Aligned_cols=25 Identities=20% Similarity=0.159 Sum_probs=21.6
Q ss_pred EEEeCCCcceEeCcccCceeEEEEE
Q 038979 352 WTVANEGGNFSIKNVLIGNYNLYAW 376 (606)
Q Consensus 352 wt~td~~G~F~I~nV~pGtY~L~a~ 376 (606)
-..||++|.++|.++++|+|.|.=.
T Consensus 71 ~~tTd~~G~~~~~~L~~G~Y~v~Et 95 (239)
T 2pz4_A 71 EATTNQQGKATFNQLPDGIYYGLAV 95 (239)
T ss_dssp EEECCTTSEEEEEEEESEEEEEEEE
T ss_pred EEEECCCCeEEECCCCCeeEEEEEE
Confidence 3468999999999999999998654
No 71
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=39.99 E-value=15 Score=43.87 Aligned_cols=66 Identities=15% Similarity=0.216 Sum_probs=45.4
Q ss_pred EEEEEEecCcc-ccccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEE-eecEEEEEEeecCceee
Q 038979 496 WQIQFKLEGVV-KKATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIH-GVYKLFNVDVPGKVLRK 573 (606)
Q Consensus 496 w~I~F~L~~~~-~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~-G~~~~~~~~ipa~~L~~ 573 (606)
.+=.|.+++.. ......|++.. ......|.|||+.+. .| |-+..++|+|+. .|+.
T Consensus 116 Yrr~f~vp~~~~~~~~v~L~F~g---v~~~a~V~vNG~~vG-------------------~~~gg~~p~~~DIT~-~lk~ 172 (1032)
T 3oba_A 116 YARTFELDSKSIESFEHRLRFEG---VDNCYELYVNGQYVG-------------------FNKGSRNGAEFDIQK-YVSE 172 (1032)
T ss_dssp EEEEEEECHHHHHHEEEEEEESC---EESEEEEEETTEEEE-------------------EEECTTSCEEEECTT-TCCS
T ss_pred EEEEEEECchhcCCCEEEEEECC---cceeEEEEECCEEEE-------------------EEeCCcccEEEEChh-hccC
Confidence 45578887653 32234455433 345678999998543 22 556778999987 6789
Q ss_pred eecEEEEEeec
Q 038979 574 GNNTIYLSQPR 584 (606)
Q Consensus 574 G~NtI~l~~~~ 584 (606)
|+|+|.+.+.+
T Consensus 173 G~N~L~V~V~~ 183 (1032)
T 3oba_A 173 GENLVVVKVFK 183 (1032)
T ss_dssp EEEEEEEEEES
T ss_pred CcEEEEEEEEC
Confidence 99999999865
No 72
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=39.13 E-value=1.5e+02 Score=32.24 Aligned_cols=81 Identities=19% Similarity=0.158 Sum_probs=50.5
Q ss_pred CCCCCeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEeC--cccCceeEEEEEEC
Q 038979 301 RSNKRGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSIK--NVLIGNYNLYAWIP 378 (606)
Q Consensus 301 ~~~qRGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I~--nV~pGtY~L~a~~~ 378 (606)
.+...-...=++++.|.+ |.|..+..|.+..++.. . -..--..||++|.+++. .-++|+|+++|.+.
T Consensus 21 ~AdG~~~~~ltatV~D~~----Gnpv~g~~Vtf~~~~g~--~-----~~~~t~~Td~~G~a~~tltst~aG~~~VtAt~~ 89 (492)
T 1cwv_A 21 PANGKTAITVEFTVADFE----GKPLAGQEVVITTNNGA--L-----PNKITEKTDANGVARIALTNTTDGVTVVTAEVE 89 (492)
T ss_dssp ESSSSSCEEEEEEEECTT----SCBCCSCEEEEECCTTC--B-----SCEEEEECCTTSEEEEEEBCSSCEEEEEEEEET
T ss_pred eeCCCceEEEEEEEEcCC----CCCCCCCEEEEEECCCc--c-----ccccceeeCCCceEEEEEEcCcceEEEEEEEEC
Confidence 333333333344446643 88999998887654221 1 11234578999987654 56899999999986
Q ss_pred ceeceeeeeeEEEEeCCc
Q 038979 379 GFIGDFKYHAAIRITAGS 396 (606)
Q Consensus 379 G~~G~~~~~~~VtV~aG~ 396 (606)
|. .+...|++.+|.
T Consensus 90 g~----s~s~~v~f~a~~ 103 (492)
T 1cwv_A 90 GQ----RQSVDTHFVKGT 103 (492)
T ss_dssp TE----EEEEEEEEECCC
T ss_pred Cc----cceeEEEEeecc
Confidence 63 234457777664
No 73
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=38.95 E-value=26 Score=41.79 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=34.9
Q ss_pred EEEeCCEEEEeCCeEEEEEeCCceeEEEEEEcCEEeccc
Q 038979 7 LHEQNNHVVMNNGILQVSISTPQGFVIGIQYKGNKNLLN 45 (606)
Q Consensus 7 ~~~~g~~vv~~Ng~l~vtv~k~~g~itsl~y~G~e~l~~ 45 (606)
+++.+..+++.++.++++|+|.+|.++|++++|++.+.+
T Consensus 740 ~~~~~~~~~v~~~~~~~~f~~~~G~l~s~~~~g~~~l~~ 778 (1023)
T 1jz7_A 740 LTTSEMDFCIELGNKRWQFNRQSGFLSQMWIGDKKQLLT 778 (1023)
T ss_dssp EEECSSEEEEEETTEEEEEETTTCSEEEEEETTEECEEE
T ss_pred ceecCceEEEEECCEEEEEECCcceEEEEEECCEEeecC
Confidence 667788999999999999999999999999999987643
No 74
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=38.45 E-value=21 Score=42.55 Aligned_cols=68 Identities=13% Similarity=0.180 Sum_probs=45.8
Q ss_pred eEEEEEEecCccc-cccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceee
Q 038979 495 TWQIQFKLEGVVK-KATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRK 573 (606)
Q Consensus 495 ~w~I~F~L~~~~~-~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~ 573 (606)
..+-.|.+++... .....|++..+ .....|.|||+.+.. -.|-+..++|+|.. .|+.
T Consensus 122 ~Yrr~F~vp~~~~~~~~v~L~F~gv---~~~a~V~vNG~~vG~------------------~~gg~~p~~~DIT~-~L~~ 179 (1023)
T 1jz7_A 122 CYSLTFNVDESWLQEGQTRIIFDGV---NSAFHLWCNGRWVGY------------------GQDSRLPSEFDLSA-FLRA 179 (1023)
T ss_dssp EEEEEEEECHHHHHSSEEEEEESCE---ESEEEEEETTEEEEE------------------EECTTSCEEEECTT-TCCS
T ss_pred EEEEEEEeCchhcCCCEEEEEECCC---CcceEEEECCEEEcc------------------ccCCCCceEEecHh-hccC
Confidence 3455788876432 23355655433 346789999985430 12446678999986 7889
Q ss_pred eecEEEEEeec
Q 038979 574 GNNTIYLSQPR 584 (606)
Q Consensus 574 G~NtI~l~~~~ 584 (606)
|+|+|.+.+.+
T Consensus 180 G~N~L~V~V~~ 190 (1023)
T 1jz7_A 180 GENRLAVMVLR 190 (1023)
T ss_dssp EEEEEEEEEES
T ss_pred CCcEEEEEEEe
Confidence 99999999864
No 75
>3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A*
Probab=37.48 E-value=1.1e+02 Score=32.59 Aligned_cols=81 Identities=16% Similarity=0.289 Sum_probs=47.0
Q ss_pred ccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeeeecEEEEEeecCCCC
Q 038979 509 ATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKGNNTIYLSQPRKLDA 588 (606)
Q Consensus 509 ~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~~~ 588 (606)
+.++|++-+|+.+++.++|++++.+.. ...+-.++.+.+ -..|+..+.+| .. .+|.+.|+|....+. +
T Consensus 406 g~~~~~~~vas~~~g~ievr~~s~~G~--~~g~~~v~~tgg------~~~w~~~~~~v--~~-~~G~h~ly~~f~g~~-~ 473 (487)
T 3c7f_A 406 GARSFKANVASTLGGKIEVRLDSADGK--LVGTLNVPSTGG------AQTWREIETAV--SG-ATGVHKVFFVFTGTG-T 473 (487)
T ss_dssp CEEEEEEEEEESSCEEEEEEESSTTSC--EEEEEEECCCSE------EEEEEEEEEEC--CS-CCSEEEEEEEEECSC-S
T ss_pred CccEEEEEEEeCCCcEEEEEECCCCCc--EEEEEEeCCCCC------CcccEEEEEEE--cC-CCceEEEEEEEECCC-C
Confidence 566666666667788999999876543 111212222111 12344444444 33 589999999865432 1
Q ss_pred CceEEEEEEEEec
Q 038979 589 FTGIMYDYLRFEG 601 (606)
Q Consensus 589 ~~~vmyD~IrLe~ 601 (606)
-.-+-+|.++++.
T Consensus 474 ~~l~~~~~~~f~~ 486 (487)
T 3c7f_A 474 GNLFNFDYWQFTQ 486 (487)
T ss_dssp SCCCEEEEEEEEE
T ss_pred cceEEEEEEEEEe
Confidence 1237788888763
No 76
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=37.02 E-value=36 Score=38.27 Aligned_cols=26 Identities=23% Similarity=0.519 Sum_probs=23.4
Q ss_pred EEEeCCCcceEeCcccCceeEEEEEE
Q 038979 352 WTVANEGGNFSIKNVLIGNYNLYAWI 377 (606)
Q Consensus 352 wt~td~~G~F~I~nV~pGtY~L~a~~ 377 (606)
|..+.....-+..|++||+|+|.|.+
T Consensus 731 W~~~~~~~~~~ytnL~pG~Y~f~V~a 756 (781)
T 3v9f_A 731 WYTINEQNSVTFRNIPPGKYEFLVKA 756 (781)
T ss_dssp EEEESSCSEEEECSCCSEEEEEEEEE
T ss_pred ccCcCCcceEEEcCCCCceEEEEEEE
Confidence 87888778899999999999999985
No 77
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=35.11 E-value=2.4e+02 Score=28.27 Aligned_cols=33 Identities=12% Similarity=0.230 Sum_probs=27.6
Q ss_pred EEEEeCCeEEEEEeCCceeEEEEEEc--CEEeccc
Q 038979 13 HVVMNNGILQVSISTPQGFVIGIQYK--GNKNLLN 45 (606)
Q Consensus 13 ~vv~~Ng~l~vtv~k~~g~itsl~y~--G~e~l~~ 45 (606)
.++|.|+.++++|..-+|.|+||+.+ |.|.++.
T Consensus 2 ~~~l~n~~~~~~i~~~GA~l~s~~~~~~~~e~l~~ 36 (307)
T 3dcd_A 2 DYTIENNMIKVVISDHGAEIQSVKSAHTDEEFMWQ 36 (307)
T ss_dssp EEEEECSSEEEEEETBTTEEEEEEETTTCCBCBCC
T ss_pred EEEEECCCEEEEEEccCcEEEEEEECCCCcEEEEC
Confidence 47899999999999999999999973 6666654
No 78
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=34.32 E-value=28 Score=39.16 Aligned_cols=68 Identities=24% Similarity=0.319 Sum_probs=43.7
Q ss_pred ceeEEEEEEecCccccccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCcee
Q 038979 493 GSTWQIQFKLEGVVKKATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLR 572 (606)
Q Consensus 493 ~~~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~ 572 (606)
++=.+-.|++++. +. .+|-...-+.=+|.|||.++.. -|.++- ...+| ||+++|+
T Consensus 508 p~~yk~~f~~~~~---~D----t~Ld~~g~gKG~vwVNG~nlGR----YW~~GP-----------qqtlY---vP~~~Lk 562 (612)
T 3d3a_A 508 PAYYRSTFNLNEL---GD----TFLNMMNWSKGMVWVNGHAIGR----YWEIGP-----------QQTLY---VPGCWLK 562 (612)
T ss_dssp CEEEEEEEEESSC---CB----EEEECTTCCEEEEEETTEEEEE----EETTCS-----------CCEEE---ECGGGCC
T ss_pred CEEEEEEEECCCC---Cc----EEEecCCCCcEEEEECCEeEEe----EEecCC-----------EEEEE---ecHHHcC
Confidence 3445667887532 22 3344456688899999998763 343321 12344 9999999
Q ss_pred eeecEEEEEeecC
Q 038979 573 KGNNTIYLSQPRK 585 (606)
Q Consensus 573 ~G~NtI~l~~~~g 585 (606)
+|.|+|.|=-..+
T Consensus 563 ~g~N~ivvfE~~~ 575 (612)
T 3d3a_A 563 KGENEIIILDMAG 575 (612)
T ss_dssp SEEEEEEEEESSC
T ss_pred CCCcEEEEEEEcC
Confidence 9999987754444
No 79
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=34.08 E-value=32 Score=38.71 Aligned_cols=26 Identities=19% Similarity=0.381 Sum_probs=22.8
Q ss_pred EEEeCCCcceEeCcccCceeEEEEEE
Q 038979 352 WTVANEGGNFSIKNVLIGNYNLYAWI 377 (606)
Q Consensus 352 wt~td~~G~F~I~nV~pGtY~L~a~~ 377 (606)
|..+.....-+..|++||+|+|.|.+
T Consensus 737 W~~~~~~~~~~ytnL~pG~Y~f~V~a 762 (795)
T 4a2l_A 737 WYYLTDSRTVSYSNLPQGTYQFLVKA 762 (795)
T ss_dssp CEEESSCCEEEEECCCSEEEEEEEEE
T ss_pred ccCCCCcCeEEecccCCCeEEEEEEE
Confidence 77777777899999999999999986
No 80
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=33.98 E-value=41 Score=29.86 Aligned_cols=16 Identities=19% Similarity=0.138 Sum_probs=13.8
Q ss_pred cccCceeEEEEEECce
Q 038979 365 NVLIGNYNLYAWIPGF 380 (606)
Q Consensus 365 nV~pGtY~L~a~~~G~ 380 (606)
.++||+|+|.|+..|-
T Consensus 89 ~~~pG~Ytl~a~l~~~ 104 (120)
T 3isy_A 89 VPEPGTYEVKVTFKGR 104 (120)
T ss_dssp CCCSEEEEEEEEECCE
T ss_pred CCCCccEEEEEEEEee
Confidence 6899999999998663
No 81
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=33.90 E-value=82 Score=35.74 Aligned_cols=59 Identities=14% Similarity=0.317 Sum_probs=39.7
Q ss_pred CeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEeCcccCceeEEEEE
Q 038979 305 RGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSIKNVLIGNYNLYAW 376 (606)
Q Consensus 305 RGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I~nV~pGtY~L~a~ 376 (606)
.|...-++.++|.. ...++..+.|.|..+ .+-.|+++++.+|...|..+.||+|+|++.
T Consensus 445 ~~~~~~~v~vtd~~---~~~~~~~~~v~l~~~----------~~~~~~~~t~~dg~~~~~~~~~G~Y~~~v~ 503 (671)
T 1r6v_A 445 GGVEEFQVVVTDAK---GNFGVPTVFVSMMRD----------NGSCYYAKTGPDGIARFPHIDSGTYDIFVG 503 (671)
T ss_dssp SEEEEEEEEEECTT---SCSBCTTEEEEEECS----------SSCCEEEECCTTSEEEEEEEECEEEEEEEE
T ss_pred CCccceEEEEecCC---CCcCcceeEEEEecC----------CCceEecccCCCCceeeeccCceEEEEEEe
Confidence 34433455556631 112233455666544 255789999999999999999999999985
No 82
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=31.99 E-value=39 Score=37.81 Aligned_cols=27 Identities=22% Similarity=0.370 Sum_probs=21.4
Q ss_pred EEEeC-CCcceEeCcccCceeEEEEEEC
Q 038979 352 WTVAN-EGGNFSIKNVLIGNYNLYAWIP 378 (606)
Q Consensus 352 wt~td-~~G~F~I~nV~pGtY~L~a~~~ 378 (606)
|..++ ....-+..|++||+|+|.|.+.
T Consensus 702 W~~~~~~~~~~~ytnL~pG~Y~f~V~a~ 729 (758)
T 3ott_A 702 WNFLKSNINRITYSNLSYGNYQLIISKL 729 (758)
T ss_dssp CEECCTTCCEEEECSCCSEEEEEEEEEB
T ss_pred ccCCCCCcceEEecCCCCccEEEEEEEe
Confidence 66665 3456899999999999999863
No 83
>3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for S genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=31.21 E-value=1.3e+02 Score=29.35 Aligned_cols=62 Identities=15% Similarity=0.266 Sum_probs=39.0
Q ss_pred CeEEEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEeCcccCceeEEEEE
Q 038979 305 RGSISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSIKNVLIGNYNLYAW 376 (606)
Q Consensus 305 RGtVsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I~nV~pGtY~L~a~ 376 (606)
-++++|+|.-...-+.-+ ...++-+-|-+. +|.. .+-|.+ ....||.|+ ..+=.|+|.|..-
T Consensus 10 ~a~l~G~iv~tGE~i~~~--~~~gv~i~l~E~----gy~~--~~~~~~-~v~qDGtf~-~~lF~G~Yki~~~ 71 (215)
T 3hn5_A 10 ESMLTGRVMYNGEALQLR--GNEAVQLQLYQH----GYAK--HDPINV-YVNQDGMYS-ANLFDGEYQMITK 71 (215)
T ss_dssp CEEEEEEEEETTEECCCC--CTTSCEEEEESS----CGGG--CCCEEE-EBCTTSEEE-EEECSEEEEEEEC
T ss_pred CceEEEEEEECCCEeeec--CCCceEEEEEEc----ccCC--CCCeeE-EEcCCCcEE-EEEECceeEEEEe
Confidence 479999997332111111 112366666554 4652 234444 378899999 7999999999984
No 84
>3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus}
Probab=28.55 E-value=1.2e+02 Score=30.89 Aligned_cols=78 Identities=15% Similarity=0.293 Sum_probs=49.1
Q ss_pred CcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEeCcccCceeEEEEEECceeceeeeeeEEEEeCCceeeecc
Q 038979 323 GIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSIKNVLIGNYNLYAWIPGFIGDFKYHAAIRITAGSAKQIGN 402 (606)
Q Consensus 323 ~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I~nV~pGtY~L~a~~~G~~G~~~~~~~VtV~aG~t~~l~~ 402 (606)
+..+.++.|.+ |...+...|-|+..+.+|.|+|.++..|.+ +.|..|.++.-|.
T Consensus 76 ~sTadGa~V~q--------W~~nGg~NQqW~l~~~~G~y~I~n~~SGkc------------------LDV~~gsttanGa 129 (286)
T 3phz_A 76 HAATDGTAIIG--------YRPTGGDNQKWIISQINDVWKIKSKETGTF------------------VTLLNGDGGGTGT 129 (286)
T ss_dssp GCCSTTEEEEE--------ECCCCCGGGCEEEEESSSCEEEEETTTCCE------------------EEEETC---CCCE
T ss_pred CcCCCCCeEEE--------eCCCCChhcEEEEEcCCCeEEEEECCCCcE------------------EEeCCCCcCCCce
Confidence 34567888886 766667789998877789999999888853 2222222211111
Q ss_pred -eEEecCC--CCCceeEEeccCCCccce
Q 038979 403 -LVYKAPR--NGPTLWEIGIPDRSAAEF 427 (606)
Q Consensus 403 -l~~~~p~--~~~~LweIG~~Drta~eF 427 (606)
..|. +. ...+.|++.--..++.++
T Consensus 130 V~qWt-~~tgg~NQqW~~~~vs~tg~~i 156 (286)
T 3phz_A 130 VVGWQ-NITNNTSQNWTFQKLSQTGANV 156 (286)
T ss_dssp EEEES-CCCSSCTTCEEEEECEEEHHHH
T ss_pred EEEcc-CCCCCccCcEEEEEccCCcccc
Confidence 2344 23 567999997766666655
No 85
>1b4r_A Protein (PKD1_human); PKD domain 1 from human polycystein-1, polycystin (precursor), membrane protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=28.52 E-value=54 Score=26.95 Aligned_cols=29 Identities=24% Similarity=0.285 Sum_probs=17.1
Q ss_pred ccCceeEEEEEECceeceeeeeeEEEEeC
Q 038979 366 VLIGNYNLYAWIPGFIGDFKYHAAIRITA 394 (606)
Q Consensus 366 V~pGtY~L~a~~~G~~G~~~~~~~VtV~a 394 (606)
-+||+|++++.+.--.+.-.....|+|++
T Consensus 52 ~~~G~YtV~Ltv~~g~~~~~a~~~V~V~~ 80 (80)
T 1b4r_A 52 VLPGRYHVTAVLALGAGSALLGTDVQVEA 80 (80)
T ss_dssp CSSEEEEEEEEEECSSCEEEEEEEEEEBC
T ss_pred CCCcEEEEEEEEEeCCceEEEEEEEEEEC
Confidence 47999999887641112223455566653
No 86
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=27.41 E-value=26 Score=39.25 Aligned_cols=64 Identities=27% Similarity=0.367 Sum_probs=37.8
Q ss_pred ceeEEEEEEecCccccccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCcee
Q 038979 493 GSTWQIQFKLEGVVKKATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLR 572 (606)
Q Consensus 493 ~~~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~ 572 (606)
|.-.+-.|++++. . .++ | ....-+.=.|.|||.++.. -|.++- ...+| ||+.+|+
T Consensus 506 P~fy~g~f~~~~~-~-DTf-L----d~~gwgKG~v~VNG~nLGR----YW~~GP-----------Q~tLY---vP~~~Lk 560 (595)
T 4e8d_A 506 PAFYAYDFTVEEP-K-DTY-L----DLSEFGKGVAFVNGQNLGR----FWNVGP-----------TLSLY---IPHSYLK 560 (595)
T ss_dssp CEEEEEEEEESSC-C-BEE-E----ECTTCCEEEEEETTEEEEE----EETTCS-----------BCEEE---ECGGGSC
T ss_pred CeEEEEEEEcCCC-C-CEE-E----eCCCCceEEEEECCeeeec----ccCCCC-----------eEEEE---ecHHHhC
Confidence 4445556776432 1 233 2 2234567789999987753 222221 12344 9999999
Q ss_pred eeecEEEEE
Q 038979 573 KGNNTIYLS 581 (606)
Q Consensus 573 ~G~NtI~l~ 581 (606)
+|.|+|.+=
T Consensus 561 ~G~NeIvvf 569 (595)
T 4e8d_A 561 EGANRIIIF 569 (595)
T ss_dssp SEEEEEEEE
T ss_pred cCCceEEEE
Confidence 999987653
No 87
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=27.26 E-value=56 Score=33.91 Aligned_cols=65 Identities=22% Similarity=0.267 Sum_probs=39.9
Q ss_pred EEEEEEEeeccccccCcccCceEEEecCCCCCCCcccccccceeEEEeCCCcceEeCcccCceeEEEEE
Q 038979 308 ISGRLIVKDRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQFWTVANEGGNFSIKNVLIGNYNLYAW 376 (606)
Q Consensus 308 VsG~v~~sd~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yqywt~td~~G~F~I~nV~pGtY~L~a~ 376 (606)
..|.|.+.-.- ...+.+..+|...|... +|..-..+ +...-..+|++|.|.|.++++|+|.|.=-
T Consensus 249 ~tg~i~i~K~d-~~~~~~L~GA~F~l~~~--~g~~~~~~-~~~~~~~td~~G~~~~~~L~~G~Y~l~E~ 313 (355)
T 3kpt_A 249 TTGIIELTKID-SANKNKMKGAEFVLKDN--NGKIVVVA-GKEVTGVSDENGVIKWSNIPYGDYQIFET 313 (355)
T ss_dssp CEEEEEEEEEE-TTTCCBCSCCEEEEEET--TSCBCBSS-SSBCEEECCTTSEEEEEEEESSEEEEEEE
T ss_pred cccceEEEEEe-CCCCcccCCCEEEEEeC--CCCEEEec-cceEEEEECCCCeEEECcCCCceEEEEEE
Confidence 35665544311 12367888888877632 22221111 11123458999999999999999999865
No 88
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=26.88 E-value=28 Score=38.73 Aligned_cols=67 Identities=18% Similarity=0.220 Sum_probs=43.7
Q ss_pred EEEEEEecCcc---ccccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCcee
Q 038979 496 WQIQFKLEGVV---KKATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLR 572 (606)
Q Consensus 496 w~I~F~L~~~~---~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~ 572 (606)
.+-+|.+++.- ......|++. +....-.|.|||+.+.. -.|-+..++|+|+ ..|+
T Consensus 81 Yr~~f~~p~~~~~~~~~~~~L~f~---gv~~~a~V~vNG~~vg~------------------~~~g~~~~~~dit-~~l~ 138 (613)
T 3hn3_A 81 YEREVILPERWTQDLRTRVVLRIG---SAHSYAIVWVNGVDTLE------------------HEGGYLPFEADIS-NLVQ 138 (613)
T ss_dssp EEEEECCCHHHHHCTTEEEEEEES---CCCSEEEEEETTEEEEE------------------EESSSSCEEEECH-HHHC
T ss_pred EEEEEEeCchhhhcCCCEEEEEEC---CcceEEEEEECCEEEeE------------------EcCCcceEEEECh-hhhc
Confidence 45578886641 1223445553 34567899999985530 1255677899997 6888
Q ss_pred eee----cEEEEEeec
Q 038979 573 KGN----NTIYLSQPR 584 (606)
Q Consensus 573 ~G~----NtI~l~~~~ 584 (606)
.|. |+|.+.+.+
T Consensus 139 ~g~~~~~n~l~V~v~n 154 (613)
T 3hn3_A 139 VGPLPSRLRITIAINN 154 (613)
T ss_dssp CC---CCEEEEEEEEC
T ss_pred CCCCCcceEEEEEEeC
Confidence 885 999998853
No 89
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=22.40 E-value=66 Score=25.87 Aligned_cols=37 Identities=14% Similarity=0.084 Sum_probs=24.8
Q ss_pred CCcceEeCcccCce-eEEEEEECceeceee-eeeEEEEe
Q 038979 357 EGGNFSIKNVLIGN-YNLYAWIPGFIGDFK-YHAAIRIT 393 (606)
Q Consensus 357 ~~G~F~I~nV~pGt-Y~L~a~~~G~~G~~~-~~~~VtV~ 393 (606)
..-.++|.+.+||+ |.+.+.+.-..|+-. ....|+|+
T Consensus 56 ~~t~~~l~~L~p~t~Y~v~V~A~~~~G~gp~ss~p~~~~ 94 (97)
T 3qht_C 56 SSSTATISGLSPGVDYTITVYAYYSYYDLYYSYSPSSIN 94 (97)
T ss_dssp TCCEEEECSCCTTCEEEEEEEEEEEETTEEEECSCEEEE
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEeCCccCCCCCCCEEEe
Confidence 45689999999998 999998643333322 22345555
No 90
>2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae}
Probab=22.36 E-value=33 Score=37.10 Aligned_cols=43 Identities=28% Similarity=0.417 Sum_probs=30.1
Q ss_pred EEeCCCcceEeCcccCceeEEEEE-ECceeceee--eeeEEEEeCCce
Q 038979 353 TVANEGGNFSIKNVLIGNYNLYAW-IPGFIGDFK--YHAAIRITAGSA 397 (606)
Q Consensus 353 t~td~~G~F~I~nV~pGtY~L~a~-~~G~~G~~~--~~~~VtV~aG~t 397 (606)
-.+|++|.|.|.++.||+|.|.=- +| .|... ....++|.+++.
T Consensus 378 ~ttd~~G~~~~~~L~~G~Y~l~EtkAP--~GY~l~~~~~~f~i~~~~~ 423 (452)
T 2xtl_A 378 LISNDKGQFEITGLTEGQYSLEETQAP--TGYAKLSGDVSFNVNATSY 423 (452)
T ss_dssp EECCTTSEEEEEEECSEEEEEEEEECC--TTBCCCSSCEEEEECTTTT
T ss_pred EEeCCCCeEEECCCCCceEEEEEeeCC--CCcccCCCCEEEEEeCCcc
Confidence 358999999999999999999755 33 22212 233577777655
No 91
>2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A
Probab=22.26 E-value=33 Score=36.91 Aligned_cols=43 Identities=30% Similarity=0.389 Sum_probs=29.8
Q ss_pred EEeCCCcceEeCcccCceeEEEEE-ECceeceee--eeeEEEEeCCce
Q 038979 353 TVANEGGNFSIKNVLIGNYNLYAW-IPGFIGDFK--YHAAIRITAGSA 397 (606)
Q Consensus 353 t~td~~G~F~I~nV~pGtY~L~a~-~~G~~G~~~--~~~~VtV~aG~t 397 (606)
..+|++|.|.|.++++|+|.|.=- +| .|... ..-.++|.+++.
T Consensus 372 ~~td~~G~~~~~~L~~G~Y~l~EtkAP--~GY~l~~~~~~f~i~~~~~ 417 (444)
T 2x9x_A 372 LVSDAQGRFEITGLLAGTYYLEETKQP--AGYALLTSRQKFEVTATSY 417 (444)
T ss_dssp EECCTTCEEEEEEECSEEEEEEEEECC--TTSCCCCSCEEEEECTTTT
T ss_pred EEECCCCeEEECCCCCceEEEEEeeCC--CCcccCCCcEEEEEeCCcc
Confidence 458999999999999999999865 32 22212 233467776654
No 92
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=21.89 E-value=70 Score=25.93 Aligned_cols=22 Identities=9% Similarity=0.117 Sum_probs=18.3
Q ss_pred CCcceEeCcccCce-eEEEEEEC
Q 038979 357 EGGNFSIKNVLIGN-YNLYAWIP 378 (606)
Q Consensus 357 ~~G~F~I~nV~pGt-Y~L~a~~~ 378 (606)
..-.|+|.+++||+ |.+.+.+.
T Consensus 53 ~~t~~~i~~L~p~t~Y~~~V~A~ 75 (100)
T 3b83_A 53 SITSLTLTNLEPNTTYEIRIVAR 75 (100)
T ss_dssp TEEEEEECSCCTTCEEEEEEEEE
T ss_pred cceEEEECCCCCCCEEEEEEEEE
Confidence 44579999999997 99998863
No 93
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=21.27 E-value=7.3e+02 Score=28.84 Aligned_cols=111 Identities=15% Similarity=0.152 Sum_probs=67.0
Q ss_pred EEEeCCeEEEEEeCCceeEEEEEE--cCEEecc----cc---CCCc-c---CcC-------ccceEEEEEEccCcEEEEE
Q 038979 14 VVMNNGILQVSISTPQGFVIGIQY--KGNKNLL----NV---QNEE-D---NRG-------IEATNYKVIMRTKEQVELS 73 (606)
Q Consensus 14 vv~~Ng~l~vtv~k~~g~itsl~y--~G~e~l~----~~---~~~~-~---~~G-------l~~~~~~v~~~~~~~i~vs 73 (606)
.+|.|+.+.|+|++ +|.| +|.= +|.+.+- +. .+.. . ..+ ....+++|+++++-...|.
T Consensus 528 ~~leN~~~~v~~d~-~G~l-sl~Dk~~gre~~~~~~~~d~gd~g~~Y~~~p~~~d~~~~~~~~~~~v~v~e~gpl~~~v~ 605 (899)
T 3lvt_A 528 NEMENEFIQVKIEN-NGSL-TIADKKTGETFSKLLTFEDTGDIGNEYIFFKPTEDQGITTENVTAEITNKENSPVKASYQ 605 (899)
T ss_dssp TEEECSSEEEEECT-TSCE-EEEETTTCCEEEEETEEEEEECCSBTTBCCCCTTCCCEESTTCCCEEEEEEECSSEEEEE
T ss_pred cEEecCcEEEEEcC-CCcE-EEEECCCCeEEEEEEEEecCCCCCCceeecCCcCCceeeccCCCceEEEEEcCCCEEEEE
Confidence 57999999999986 8999 6743 4555331 10 0000 0 000 1226788888777666666
Q ss_pred EEEeec-C----------------------CCCCCccceeeeEEEEEEcCCceEEEEEEeecccCCCCCcccccEEEEeC
Q 038979 74 FTRMWQ-P----------------------YTNGTIAPVNIDKRFLMLRGSSGFYSYAIYKRLKGWPGFQLFNNRMVFKP 130 (606)
Q Consensus 74 ~~~~~~-~----------------------~~~g~~~~~~l~~~~v~r~g~sgiY~y~i~~~~~~~p~~~lge~R~v~Rl 130 (606)
+...|. | .......++.|.+.+.|..|.+-|-.=+...... .=-.+|..|.+
T Consensus 606 v~~~~~~P~~~~~~~~~~~~~~~~~~~r~~~~S~~~~~~~i~q~i~L~~~~~~id~~~~Vdw~~-----~~~~Lrv~Fp~ 680 (899)
T 3lvt_A 606 IKQTVMLPVAADERLEEEQKAVREFRERLAQRSTTLRPFEITTMVTMIKESNQLFFETTINNQI-----KDHRLRVLFPT 680 (899)
T ss_dssp EEEEEEEESSBCTHHHHHHHTTCCGGGCCCCBCSCEEEEEEEEEEEEETTCCCEEEEEEEEECC-----CSEEEEEEECC
T ss_pred EEEEEccccchhhhhcccccccccchhhhhcccccccceEEEEEEEEeCCCCEEEEEEEECCCc-----CCEEEEEECCC
Confidence 666553 1 0001235678999999999999888777554322 12356666655
Q ss_pred C
Q 038979 131 N 131 (606)
Q Consensus 131 ~ 131 (606)
+
T Consensus 681 ~ 681 (899)
T 3lvt_A 681 G 681 (899)
T ss_dssp S
T ss_pred C
Confidence 4
No 94
>4eiu_A Uncharacterized hypothetical protein; PF12866 family protein, DUF3823, structural genomics, joint for structural genomics, JCSG; HET: PGE; 1.90A {Bacteroides uniformis}
Probab=21.14 E-value=5.1e+02 Score=25.72 Aligned_cols=65 Identities=20% Similarity=0.296 Sum_probs=39.7
Q ss_pred CeEEEEEEEEe--eccccccCcccCceEEEecCCCCCCCcccccccce-eEEEeCCCcceEeCcccCceeEEEEE
Q 038979 305 RGSISGRLIVK--DRYVSRAGIAAKGAYVGLAKPGRAGSWQTECKGYQ-FWTVANEGGNFSIKNVLIGNYNLYAW 376 (606)
Q Consensus 305 RGtVsG~v~~s--d~~~~~~~~pa~~a~V~La~~~~~g~~q~~~~~yq-ywt~td~~G~F~I~nV~pGtY~L~a~ 376 (606)
-++++|+|.-. ..-+ .......++-+-|-+. +|.+ +.+-| .+ ....+|.|+=..+=.|+|.|..-
T Consensus 9 ~s~l~G~ivd~~tGE~i-~~~~g~~gv~i~l~E~----g~~~-~~~~~~~~-~v~~DGtf~Nt~lF~G~Yki~~~ 76 (249)
T 4eiu_A 9 SETIWGEVVDEATGKRV-LTDQGSEGIRVRLTEL----SWGD-NVQHNPDF-YCMMDGTFQNTKIFKGEYNVRID 76 (249)
T ss_dssp CEEEEEEEEETTTCCBC-CCCSSTTSCEEEEEEC----CSSC-CBCCSCCE-ECCTTSEEEEEEECSEEEEEEEE
T ss_pred cceeEEEEEECCCCCEe-eeccCCCceEEEEEec----cccc-CCCccCCE-EECCCCceeeeeEEcceeEEEeC
Confidence 47999999552 1100 0001123466777554 4543 22334 33 47889999977799999999985
No 95
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=20.82 E-value=1.2e+02 Score=34.51 Aligned_cols=54 Identities=11% Similarity=0.194 Sum_probs=36.9
Q ss_pred EEEEEEecCccccccEEEEEEEeeccCCeEEEEEcCccCCCCCccccccCCCCeeeeeEEEeecEEEEEEeecCceeeee
Q 038979 496 WQIQFKLEGVVKKATYKLRVAVAAAHGAELQVRVNSRSARRPLFSSGSVGRENAIARHGIHGVYKLFNVDVPGKVLRKGN 575 (606)
Q Consensus 496 w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vNg~~~~~p~~~t~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 575 (606)
.+=.|.|++ .++|.|. +-+..++.|||+.+.. ++. ++ +|++|+
T Consensus 61 ~rk~f~~~~-----~a~l~i~----a~G~ye~~iNG~~vg~--------------y~~------r~--------~L~~G~ 103 (739)
T 3cih_A 61 FSKVLNLSE-----PEEVFIA----AEGTYNVKLDGKLQFG--------------MPE------TL--------LLPAGK 103 (739)
T ss_dssp EEEEEEESS-----CEEEEEE----EESEEEEEETTEECSS--------------CCS------EE--------EECSEE
T ss_pred EEEEEEcCC-----CcEEEEE----EcCcEEEEECCEEccC--------------CCC------ce--------EecCCc
Confidence 344588854 1566664 6689999999987651 111 11 388999
Q ss_pred cEEEEEeecCC
Q 038979 576 NTIYLSQPRKL 586 (606)
Q Consensus 576 NtI~l~~~~g~ 586 (606)
|+|-+.+-.|.
T Consensus 104 N~i~v~lg~g~ 114 (739)
T 3cih_A 104 HSLNIKVWNQA 114 (739)
T ss_dssp EEEEEEEECSS
T ss_pred eEEEEEEEeCC
Confidence 99999987764
No 96
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal DOM; usher, N-terminal domain, ternary complex with chaperone and subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=20.68 E-value=83 Score=27.37 Aligned_cols=26 Identities=8% Similarity=0.147 Sum_probs=17.8
Q ss_pred cccCceeEEEEEECceeceeeeeeEEEEe
Q 038979 365 NVLIGNYNLYAWIPGFIGDFKYHAAIRIT 393 (606)
Q Consensus 365 nV~pGtY~L~a~~~G~~G~~~~~~~VtV~ 393 (606)
.+.||+|.+.+|++|-. .....|+..
T Consensus 27 ~~~PG~Y~vdI~vN~~~---~~~~~i~f~ 52 (125)
T 3bwu_D 27 ELPPGTYRVDIYLNNGY---MATRDVTFN 52 (125)
T ss_dssp SSCSEEEEEEEEETTEE---EEEEEEEEE
T ss_pred CcCCcEEEEEEEECCeE---ccceEEEEE
Confidence 47899999999987632 333345554
No 97
>2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A
Probab=20.62 E-value=1.1e+02 Score=32.85 Aligned_cols=33 Identities=15% Similarity=0.157 Sum_probs=25.3
Q ss_pred eEEE-eecEEEEEEeecCceeeeecEEEEEeecCC
Q 038979 553 HGIH-GVYKLFNVDVPGKVLRKGNNTIYLSQPRKL 586 (606)
Q Consensus 553 ~~~~-G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~ 586 (606)
.++. |.|.+.+..-|.+.... ...|.|++..++
T Consensus 383 ~~L~~G~Y~l~EtkAP~GY~l~-~~~~~f~i~~~~ 416 (444)
T 2x9x_A 383 TGLLAGTYYLEETKQPAGYALL-TSRQKFEVTATS 416 (444)
T ss_dssp EEECSEEEEEEEEECCTTSCCC-CSCEEEEECTTT
T ss_pred CCCCCceEEEEEeeCCCCcccC-CCcEEEEEeCCc
Confidence 3444 99999999999998864 456888887664
No 98
>4b0m_A F1 capsule-anchoring protein; protein transport, chaperone-usher pathway, PILI assembly; 1.80A {Yersinia pestis} PDB: 4b0e_A
Probab=20.37 E-value=53 Score=29.47 Aligned_cols=19 Identities=32% Similarity=0.524 Sum_probs=14.8
Q ss_pred eEeCcccCceeEEEEEECc
Q 038979 361 FSIKNVLIGNYNLYAWIPG 379 (606)
Q Consensus 361 F~I~nV~pGtY~L~a~~~G 379 (606)
|+-.++.||+|.+.+|++|
T Consensus 22 F~~g~~~PG~Y~vdI~vN~ 40 (136)
T 4b0m_A 22 FNQGLQLPGNYFVNVFVNG 40 (136)
T ss_dssp HHTTCCCCEEEEEEEEETT
T ss_pred hcCCCCCCcEEEEEEEECC
Confidence 3334577999999999866
Done!