Query 038987
Match_columns 316
No_of_seqs 265 out of 669
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 08:21:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038987.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038987hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gj7_B Nuclear pore complex pr 99.0 1.1E-10 3.7E-15 94.6 2.1 54 263-316 6-94 (98)
2 3gj8_B Nuclear pore complex pr 98.6 1.7E-08 5.7E-13 80.5 2.2 53 264-316 6-87 (92)
3 1nj3_A NPL4; NZF domain, rubre 98.1 1.7E-06 5.9E-11 55.8 2.5 25 292-316 4-28 (31)
4 3a9j_C Mitogen-activated prote 98.1 1.7E-06 5.9E-11 56.9 2.4 25 292-316 6-30 (34)
5 2d9g_A YY1-associated factor 2 97.8 6.5E-06 2.2E-10 59.7 2.5 25 292-316 9-33 (53)
6 3a9j_C Mitogen-activated prote 97.7 1.4E-05 4.6E-10 52.6 2.0 25 263-287 5-33 (34)
7 3gj3_B Nuclear pore complex pr 97.6 2E-05 7E-10 52.1 2.1 25 292-316 5-29 (33)
8 2crc_A Ubiquitin conjugating e 97.6 2.5E-05 8.4E-10 56.6 2.7 25 292-316 8-32 (52)
9 1nj3_A NPL4; NZF domain, rubre 97.6 2.6E-05 8.9E-10 50.2 2.0 23 264-286 4-30 (31)
10 1w7p_D VPS36P, YLR417W; ESCRT- 97.5 1.2E-05 4E-10 82.3 0.0 54 263-316 114-202 (566)
11 2d9g_A YY1-associated factor 2 97.4 0.00012 4.1E-09 53.0 3.9 26 263-288 8-37 (53)
12 3b08_B Ranbp-type and C3HC4-ty 97.4 7E-05 2.4E-09 56.4 2.4 25 292-316 6-30 (64)
13 3gj3_B Nuclear pore complex pr 97.4 5.9E-05 2E-09 49.8 1.7 24 263-286 4-31 (33)
14 2crc_A Ubiquitin conjugating e 97.2 0.00023 7.8E-09 51.5 3.0 24 265-288 9-36 (52)
15 3gj5_B Nuclear pore complex pr 96.7 0.00071 2.4E-08 45.0 2.2 25 292-316 5-29 (34)
16 3b08_B Ranbp-type and C3HC4-ty 96.5 0.0011 3.6E-08 50.0 2.0 24 265-288 7-34 (64)
17 2ebq_A Nuclear pore complex pr 96.2 0.0029 1E-07 44.8 2.8 26 291-316 8-33 (47)
18 3gj5_B Nuclear pore complex pr 95.7 0.004 1.4E-07 41.3 1.6 25 263-287 4-32 (34)
19 2ebr_A Nuclear pore complex pr 95.5 0.0066 2.3E-07 43.0 2.4 26 291-316 8-33 (47)
20 2ebq_A Nuclear pore complex pr 94.8 0.017 5.8E-07 40.9 2.8 27 263-289 8-38 (47)
21 2ebr_A Nuclear pore complex pr 94.7 0.027 9.1E-07 39.8 3.5 26 264-289 9-38 (47)
22 3gj7_B Nuclear pore complex pr 94.6 0.011 3.9E-07 47.4 1.7 24 263-286 69-96 (98)
23 2ebv_A Nuclear pore complex pr 94.1 0.07 2.4E-06 39.2 4.8 23 264-286 29-55 (57)
24 2ebv_A Nuclear pore complex pr 93.7 0.032 1.1E-06 41.0 2.4 26 291-316 28-53 (57)
25 3cqb_A Probable protease HTPX 92.0 0.048 1.6E-06 43.6 1.4 42 19-65 58-99 (107)
26 3gj8_B Nuclear pore complex pr 90.9 0.082 2.8E-06 41.6 1.6 24 264-287 63-90 (92)
27 1w7p_D VPS36P, YLR417W; ESCRT- 86.8 0.13 4.3E-06 52.8 0.0 21 265-285 179-203 (566)
28 2k1p_A Zinc finger RAN-binding 86.2 0.49 1.7E-05 30.6 2.6 23 265-287 5-31 (33)
29 2lk0_A RNA-binding protein 5; 85.4 0.33 1.1E-05 31.3 1.5 22 265-286 4-29 (32)
30 2j9u_B VPS36, vacuolar protein 85.2 0.26 9E-06 38.1 1.1 15 264-278 15-29 (76)
31 2lk0_A RNA-binding protein 5; 84.5 0.4 1.4E-05 30.8 1.6 24 293-316 4-27 (32)
32 2k1p_A Zinc finger RAN-binding 81.9 0.73 2.5E-05 29.8 2.0 23 294-316 6-28 (33)
33 2yrc_A Protein transport prote 81.3 0.58 2E-05 34.2 1.5 37 265-308 8-47 (59)
34 2ddf_A ADAM 17; hydrolase; HET 79.3 0.97 3.3E-05 40.5 2.7 26 44-69 177-202 (257)
35 3c37_A Peptidase, M48 family; 78.5 0.72 2.5E-05 41.7 1.6 40 27-70 81-121 (253)
36 1fp0_A KAP-1 corepressor; PHD 76.6 4.5 0.00015 31.8 5.4 46 262-307 21-76 (88)
37 1n0z_A ZNF265; zinc finger, RN 75.8 3.1 0.00011 28.7 3.8 26 263-288 11-42 (45)
38 3b8z_A Protein adamts-5; alpha 75.7 1.1 3.9E-05 39.1 2.0 21 48-68 140-160 (217)
39 2i47_A ADAM 17; TACE-inhibitor 75.3 1.5 5E-05 40.2 2.7 25 44-68 183-207 (288)
40 1bud_A Protein (acutolysin A); 74.4 1.4 4.7E-05 38.1 2.2 21 48-68 132-152 (197)
41 1qua_A Acutolysin-C, hemorrhag 74.4 1.3 4.3E-05 38.3 1.9 20 49-68 135-154 (197)
42 2rjq_A Adamts-5; metalloprotea 74.0 1.3 4.4E-05 42.1 2.0 20 49-68 143-162 (378)
43 2v4b_A Adamts-1; zymogen, prot 73.8 1.3 4.5E-05 40.7 2.0 20 49-68 143-162 (300)
44 1atl_A Atrolysin C; metalloend 73.7 1.5 5E-05 38.1 2.2 21 48-68 135-155 (202)
45 2w15_A Zinc metalloproteinase 73.4 1.5 5.2E-05 38.0 2.2 21 48-68 135-155 (202)
46 1kuf_A Atrolysin E, metallopro 72.8 1.5 5.1E-05 38.1 2.0 21 48-68 137-157 (203)
47 1yp1_A FII; FII hydrolase; 1.9 72.8 1.5 5.1E-05 38.0 2.0 22 48-69 134-155 (202)
48 2rjp_A Adamts-4; metalloprotea 72.5 1.5 5.1E-05 40.7 2.0 21 48-68 142-162 (316)
49 4dd8_A Disintegrin and metallo 72.2 2 6.8E-05 37.5 2.7 23 46-68 130-152 (208)
50 2j9u_B VPS36, vacuolar protein 71.5 0.82 2.8E-05 35.3 -0.0 23 293-315 16-47 (76)
51 2cr8_A MDM4 protein; ZF-ranbp 70.7 2.9 0.0001 30.1 2.7 23 264-286 9-35 (53)
52 1r55_A ADAM 33; metalloproteas 68.4 2.1 7.3E-05 37.5 2.0 21 48-68 135-155 (214)
53 2yql_A PHD finger protein 21A; 68.2 4.1 0.00014 28.6 3.1 40 263-302 6-55 (56)
54 2e3x_A Coagulation factor X-ac 67.6 2.7 9.2E-05 41.0 2.7 23 47-69 137-159 (427)
55 2ero_A VAP-1, vascular apoptos 66.7 2.6 8.9E-05 41.1 2.4 23 46-68 143-165 (427)
56 2dw0_A Catrocollastatin; apopt 65.7 2.8 9.6E-05 40.8 2.4 22 47-68 135-156 (419)
57 3ebh_A PFA-M1, M1 family amino 65.5 2.7 9.2E-05 45.1 2.4 19 46-64 292-310 (889)
58 1n0z_A ZNF265; zinc finger, RN 64.9 3.4 0.00011 28.5 2.0 25 292-316 12-38 (45)
59 2gtq_A Aminopeptidase N; alani 64.9 2.8 9.7E-05 44.5 2.4 19 46-64 284-302 (867)
60 4aw6_A CAAX prenyl protease 1 64.6 2.2 7.5E-05 42.7 1.5 25 44-68 324-348 (482)
61 3u9w_A Leukotriene A-4 hydrola 63.8 1.8 6.1E-05 43.8 0.7 20 46-65 284-303 (608)
62 2ysm_A Myeloid/lymphoid or mix 63.1 5 0.00017 31.7 3.1 40 264-307 46-108 (111)
63 3b34_A Aminopeptidase N; prote 62.2 3.4 0.00012 44.2 2.4 20 46-65 309-328 (891)
64 3k7l_A Atragin; SVMP, metallop 62.1 3.3 0.00011 40.5 2.2 22 47-68 142-163 (422)
65 3k7n_A K-like; SVMP, hydrolase 62.1 3.3 0.00011 40.1 2.2 22 47-68 137-158 (397)
66 2c6a_A Ubiquitin-protein ligas 60.6 3.7 0.00013 28.8 1.6 22 265-286 12-37 (46)
67 1z5h_A Tricorn protease intera 60.4 3.8 0.00013 42.8 2.4 19 46-64 256-274 (780)
68 4fke_A Aminopeptidase N; zinc 60.1 3.9 0.00013 43.5 2.4 22 44-65 311-332 (909)
69 1g12_A Peptidyl-Lys metalloend 60.0 2.8 9.4E-05 35.9 1.1 15 47-61 109-123 (167)
70 4axq_A Archaemetzincin; metall 59.6 9.9 0.00034 32.7 4.5 22 46-67 111-132 (163)
71 2xdt_A Endoplasmic reticulum a 59.4 4 0.00014 43.3 2.4 19 46-64 299-317 (897)
72 1mm2_A MI2-beta; PHD, zinc fin 58.3 13 0.00044 26.6 4.3 41 263-303 6-56 (61)
73 2ejq_A Hypothetical protein TT 57.3 4.3 0.00015 33.9 1.8 36 26-61 64-101 (130)
74 1eb6_A Neutral protease II; me 57.2 3.5 0.00012 35.6 1.2 15 48-62 121-135 (177)
75 2l5u_A Chromodomain-helicase-D 57.1 7.2 0.00025 28.0 2.7 42 262-303 7-58 (61)
76 4ger_A Gentlyase metalloprotea 56.4 4.6 0.00016 38.3 2.0 27 41-67 121-147 (304)
77 1pcx_A Protein transport prote 55.9 3.3 0.00011 43.8 1.1 35 266-307 112-147 (810)
78 1bqb_A Protein (aureolysin); h 55.8 4.7 0.00016 38.1 2.0 26 41-66 130-155 (301)
79 1m2v_B SEC24, protein transpor 53.5 3.9 0.00013 44.1 1.1 35 266-307 228-263 (926)
80 3se6_A Endoplasmic reticulum a 52.7 6.2 0.00021 42.5 2.5 19 46-64 361-379 (967)
81 3g5c_A ADAM 22; alpha/beta fol 52.7 5.2 0.00018 40.3 1.8 22 48-69 133-154 (510)
82 3dnz_A Thermolysin; hydrolase, 52.2 5.8 0.0002 37.8 2.0 25 41-65 128-152 (316)
83 3shb_A E3 ubiquitin-protein li 50.8 9.7 0.00033 28.9 2.7 17 264-285 19-35 (77)
84 1m2o_A SEC23, protein transpor 49.7 6.1 0.00021 41.4 1.8 35 266-307 53-90 (768)
85 2cr8_A MDM4 protein; ZF-ranbp 49.4 10 0.00036 27.2 2.4 25 291-315 8-32 (53)
86 3khi_A Putative metal-dependen 49.1 9.6 0.00033 35.5 2.9 61 20-85 120-191 (267)
87 1xwh_A Autoimmune regulator; P 48.5 10 0.00035 27.4 2.4 42 265-306 7-58 (66)
88 3e11_A Predicted zincin-like m 48.0 7.6 0.00026 31.6 1.8 17 46-62 87-103 (114)
89 3v43_A Histone acetyltransfera 46.2 14 0.00049 29.3 3.2 18 264-285 53-70 (112)
90 3dte_A IRRE protein; radiotole 46.0 6.2 0.00021 37.1 1.1 41 19-67 74-114 (301)
91 3eh1_A Protein transport prote 46.0 6.4 0.00022 41.3 1.3 35 266-308 85-120 (751)
92 2puy_A PHD finger protein 21A; 45.9 13 0.00043 26.3 2.5 40 265-304 4-53 (60)
93 2nut_A Protein transport prote 45.3 6.4 0.00022 41.3 1.2 35 266-307 62-99 (769)
94 2xq0_A LTA-4 hydrolase, leukot 45.2 7.5 0.00026 39.5 1.7 17 48-64 294-310 (632)
95 3cia_A Cold-active aminopeptid 44.9 7.7 0.00026 39.1 1.7 17 48-64 293-309 (605)
96 2kwj_A Zinc finger protein DPF 44.6 8.3 0.00029 30.8 1.5 12 291-302 96-107 (114)
97 3efo_B SEC24 related gene fami 44.3 4.9 0.00017 42.3 0.1 32 269-307 101-133 (770)
98 3eh2_A Protein transport prote 43.9 5 0.00017 42.2 0.1 32 269-307 97-129 (766)
99 2lri_C Autoimmune regulator; Z 43.8 18 0.0006 26.5 3.1 37 267-303 13-59 (66)
100 2e6r_A Jumonji/ARID domain-con 43.5 18 0.00062 28.0 3.3 42 262-303 12-66 (92)
101 2c6a_A Ubiquitin-protein ligas 40.9 12 0.00041 26.3 1.6 23 293-315 12-34 (46)
102 4fgm_A Aminopeptidase N family 40.3 13 0.00043 37.9 2.4 19 46-64 264-282 (597)
103 2rpq_B Activating transcriptio 40.3 6.9 0.00024 27.6 0.3 15 210-224 31-45 (49)
104 2vqx_A Metalloproteinase; ther 37.7 11 0.00037 36.3 1.3 24 42-65 149-172 (341)
105 2x7m_A Archaemetzincin; metall 37.7 16 0.00054 32.3 2.3 19 47-65 137-155 (195)
106 2yt5_A Metal-response element- 37.6 9 0.00031 27.4 0.6 43 265-307 5-65 (66)
107 2kn9_A Rubredoxin; metalloprot 37.2 21 0.00071 27.7 2.6 38 264-302 25-68 (81)
108 1vq8_Z 50S ribosomal protein L 36.0 6.5 0.00022 30.5 -0.4 31 279-309 30-60 (83)
109 3lmc_A Peptidase, zinc-depende 35.6 18 0.0006 32.6 2.3 22 46-67 140-161 (210)
110 3asl_A E3 ubiquitin-protein li 35.5 36 0.0012 24.9 3.7 9 294-302 60-68 (70)
111 3j21_g 50S ribosomal protein L 35.4 16 0.00056 25.9 1.6 22 294-315 14-35 (51)
112 4rxn_A Rubredoxin; electron tr 34.9 22 0.00076 25.4 2.3 14 265-278 2-15 (54)
113 1e8j_A Rubredoxin; iron-sulfur 33.9 24 0.00082 24.9 2.4 37 265-302 2-44 (52)
114 6rxn_A Rubredoxin; electron tr 33.1 24 0.00081 24.4 2.1 12 265-276 3-14 (46)
115 3pwf_A Rubrerythrin; non heme 32.7 19 0.00066 30.9 2.0 14 263-276 135-148 (170)
116 2g45_A Ubiquitin carboxyl-term 32.3 26 0.00088 29.1 2.6 22 293-316 33-54 (129)
117 1u4g_A Elastase, pseudolysin; 31.6 14 0.00048 34.9 1.0 25 41-66 127-151 (301)
118 1f62_A Transcription factor WS 31.4 28 0.00096 23.5 2.3 13 289-301 36-48 (51)
119 1dx8_A Rubredoxin; electron tr 30.8 27 0.00091 26.1 2.3 38 264-302 5-48 (70)
120 3nqx_A MCP-02, secreted metall 30.8 15 0.0005 34.9 1.0 25 41-66 128-152 (306)
121 1yuz_A Nigerythrin; rubrythrin 30.5 21 0.0007 31.5 1.9 13 265-277 170-182 (202)
122 1yk4_A Rubredoxin, RD; electro 30.1 28 0.00095 24.5 2.2 35 266-302 2-43 (52)
123 2x3c_A Toxic extracellular end 29.8 15 0.00053 34.9 1.0 15 47-61 285-299 (343)
124 1cge_A Fibroblast collagenase; 29.5 24 0.00081 29.6 2.0 20 48-67 110-129 (168)
125 2jsd_A Matrix metalloproteinas 29.3 21 0.0007 29.4 1.6 20 48-67 107-126 (160)
126 1yuz_A Nigerythrin; rubrythrin 27.5 22 0.00076 31.2 1.6 23 293-315 170-193 (202)
127 3ask_A E3 ubiquitin-protein li 26.9 41 0.0014 30.6 3.2 8 294-301 216-223 (226)
128 2ovx_A Matrix metalloproteinas 26.4 29 0.001 28.9 2.0 21 48-68 110-130 (159)
129 2k16_A Transcription initiatio 24.1 43 0.0015 24.3 2.4 39 264-302 16-67 (75)
130 1hv5_A Stromelysin 3; inhibiti 24.1 34 0.0012 28.5 2.0 22 47-68 111-132 (165)
131 2e6s_A E3 ubiquitin-protein li 23.9 73 0.0025 23.8 3.7 8 294-301 68-75 (77)
132 2xs4_A Karilysin protease; hyd 23.7 27 0.00093 29.1 1.3 21 48-68 114-134 (167)
133 1weu_A Inhibitor of growth fam 23.7 2.5E+02 0.0084 21.7 6.8 15 292-306 74-88 (91)
134 1rm8_A MMP-16, matrix metallop 23.7 30 0.001 28.9 1.6 21 47-67 115-135 (169)
135 1lko_A Rubrerythrin all-iron(I 23.6 23 0.00079 30.7 0.9 22 265-286 154-181 (191)
136 1hy7_A Stromelysin-1, MMP-3; m 22.8 29 0.00098 29.2 1.3 21 48-68 112-132 (173)
137 1y93_A Macrophage metalloelast 22.8 38 0.0013 28.2 2.0 21 48-68 107-127 (159)
138 1lko_A Rubrerythrin all-iron(I 21.7 34 0.0012 29.5 1.6 23 294-316 155-179 (191)
139 3pwf_A Rubrerythrin; non heme 21.4 31 0.001 29.6 1.2 22 294-315 138-160 (170)
140 1i76_A MMP-8;, neutrophil coll 20.1 36 0.0012 28.4 1.3 20 48-67 111-130 (163)
No 1
>3gj7_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.93A {Rattus norvegicus} PDB: 2k0c_A 3ch5_B* 3gj6_B*
Probab=98.98 E-value=1.1e-10 Score=94.62 Aligned_cols=54 Identities=19% Similarity=0.423 Sum_probs=22.6
Q ss_pred CCCccccCcceeccCC----CCCCCCCCCCC-------------------------------CCCCceeeccCCcccCcC
Q 038987 263 EPAMWECKACTFLNHG----CGSVPHQGDAS-------------------------------ANDRVWTCKFWTLENCVK 307 (316)
Q Consensus 263 ~~~~W~C~~CTllN~~----C~~C~rPr~~~-------------------------------~~~~~WsC~~CT~~N~~~ 307 (316)
..++|.|..||+.|++ |.+|..|+... .+...|.|++|||+|...
T Consensus 6 ~~~~W~C~~C~~~N~~~~~kC~aC~~pr~~~~~~~~~~~~~~~s~~~~~~~~~~~gfgd~fk~~~g~W~C~~C~~~N~~~ 85 (98)
T 3gj7_B 6 AGSSWQCDTCLLQNKVTDNKCIACQAAKLPLKETAKQTGIGTPSKSDKPASTSGTGFGDKFKPAIGTWDCDTCLVQNKPE 85 (98)
T ss_dssp -----------------------------------------------------------------CCEECTTTCCEECTT
T ss_pred CCCcccCCccccCChhhcccccccCCCCCCCcccccccCccCcccccccccccccchhhccCCCCCcccCCcCcCCChhh
Confidence 3468999999999999 99998877421 023579999999999999
Q ss_pred ccccccCCC
Q 038987 308 LDKCSRVSK 316 (316)
Q Consensus 308 ~~~C~~C~~ 316 (316)
..+|.+|++
T Consensus 86 ~~~C~aC~t 94 (98)
T 3gj7_B 86 AVKCVACET 94 (98)
T ss_dssp CSBCTTTCC
T ss_pred cceecccCC
Confidence 999999986
No 2
>3gj8_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.82A {Rattus norvegicus} PDB: 3gj4_B*
Probab=98.57 E-value=1.7e-08 Score=80.48 Aligned_cols=53 Identities=23% Similarity=0.556 Sum_probs=22.6
Q ss_pred CCccccCcceeccCC----CCCCCCCCCCC-------------------------CCCCceeeccCCcccCcCccccccC
Q 038987 264 PAMWECKACTFLNHG----CGSVPHQGDAS-------------------------ANDRVWTCKFWTLENCVKLDKCSRV 314 (316)
Q Consensus 264 ~~~W~C~~CTllN~~----C~~C~rPr~~~-------------------------~~~~~WsC~~CT~~N~~~~~~C~~C 314 (316)
...|.|..|+++|.+ |..|..|+... .+...|.|+.|++.|.....+|.+|
T Consensus 6 ~g~W~C~~C~~~N~~~~~~C~~C~~pkp~~~~~~~~~~~~~~~~~~~~~g~~~f~~~~g~W~C~~C~~~N~a~~~~C~~C 85 (92)
T 3gj8_B 6 VGSWECPVCCVSNKAEDSRCVSCTSEKPGLVSASSSNSVPVSLPSGGCLGLDKFKKPEGSWDCEVCLVQNKADSTKCIAC 85 (92)
T ss_dssp ----------------------------------------------------------CCEECTTTCCEECSSCSBCTTT
T ss_pred CcCCCCCcCCCEeccccceecccCCCCCCCCCccccccCcccccccccccccccCCCCCcccCCcCCcCChhhccccccc
Confidence 468999999999999 88887666321 1235799999999999999999999
Q ss_pred CC
Q 038987 315 SK 316 (316)
Q Consensus 315 ~~ 316 (316)
++
T Consensus 86 ~~ 87 (92)
T 3gj8_B 86 ES 87 (92)
T ss_dssp CC
T ss_pred CC
Confidence 85
No 3
>1nj3_A NPL4; NZF domain, rubredoxin knuckle, beta-ribbon, zinc- finger, ubiquitin, protein binding; NMR {Rattus norvegicus} SCOP: g.41.11.1 PDB: 1q5w_A
Probab=98.06 E-value=1.7e-06 Score=55.80 Aligned_cols=25 Identities=24% Similarity=0.517 Sum_probs=22.8
Q ss_pred CCceeeccCCcccCcCccccccCCC
Q 038987 292 DRVWTCKFWTLENCVKLDKCSRVSK 316 (316)
Q Consensus 292 ~~~WsC~~CT~~N~~~~~~C~~C~~ 316 (316)
...|+|+.|||.|......|+||++
T Consensus 4 ~~~W~C~~CTf~N~~~~~~Ce~C~~ 28 (31)
T 1nj3_A 4 SAMWACQHCTFMNQPGTGHCEMCSL 28 (31)
T ss_dssp SCCEECSSSCCEECSSCSSCSSSCC
T ss_pred CccccCCcccccCCCCCCccCCcCC
Confidence 4579999999999999999999985
No 4
>3a9j_C Mitogen-activated protein kinase kinase kinase 7- interacting protein 2; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 2wwz_C 2wx0_C 2wx1_C 3a9k_C
Probab=98.05 E-value=1.7e-06 Score=56.92 Aligned_cols=25 Identities=24% Similarity=0.506 Sum_probs=22.8
Q ss_pred CCceeeccCCcccCcCccccccCCC
Q 038987 292 DRVWTCKFWTLENCVKLDKCSRVSK 316 (316)
Q Consensus 292 ~~~WsC~~CT~~N~~~~~~C~~C~~ 316 (316)
...|+|++|||.|+.....|+||++
T Consensus 6 ~~~W~C~~CT~~N~~~~~~Ce~C~~ 30 (34)
T 3a9j_C 6 GAQWNCTACTFLNHPALIRCEQCEM 30 (34)
T ss_dssp CCCEECTTTCCEECTTCSBCTTTCC
T ss_pred CCcCCCCCCccccCCCCCeeCCCCC
Confidence 4579999999999999999999985
No 5
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.85 E-value=6.5e-06 Score=59.71 Aligned_cols=25 Identities=24% Similarity=0.538 Sum_probs=22.6
Q ss_pred CCceeeccCCcccCcCccccccCCC
Q 038987 292 DRVWTCKFWTLENCVKLDKCSRVSK 316 (316)
Q Consensus 292 ~~~WsC~~CT~~N~~~~~~C~~C~~ 316 (316)
...|.|..|||+|+....+|+||++
T Consensus 9 ~~~W~C~~CT~~N~~~~~~C~~C~~ 33 (53)
T 2d9g_A 9 EGYWDCSVCTFRNSAEAFKCMMCDV 33 (53)
T ss_dssp CCCEECSSSCCEECSSCSSCSSSCC
T ss_pred CCCcCCCCCccCCCCCCCccCCCCC
Confidence 3479999999999999999999985
No 6
>3a9j_C Mitogen-activated protein kinase kinase kinase 7- interacting protein 2; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 2wwz_C 2wx0_C 2wx1_C 3a9k_C
Probab=97.69 E-value=1.4e-05 Score=52.58 Aligned_cols=25 Identities=44% Similarity=0.911 Sum_probs=21.4
Q ss_pred CCCccccCcceeccCC----CCCCCCCCC
Q 038987 263 EPAMWECKACTFLNHG----CGSVPHQGD 287 (316)
Q Consensus 263 ~~~~W~C~~CTllN~~----C~~C~rPr~ 287 (316)
....|.|+.|||+|++ |..|..||.
T Consensus 5 ~~~~W~C~~CT~~N~~~~~~Ce~C~~~r~ 33 (34)
T 3a9j_C 5 MGAQWNCTACTFLNHPALIRCEQCEMPRH 33 (34)
T ss_dssp CCCCEECTTTCCEECTTCSBCTTTCCBSC
T ss_pred CCCcCCCCCCccccCCCCCeeCCCCCcCc
Confidence 3458999999999999 999988763
No 7
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=97.63 E-value=2e-05 Score=52.06 Aligned_cols=25 Identities=20% Similarity=0.460 Sum_probs=22.3
Q ss_pred CCceeeccCCcccCcCccccccCCC
Q 038987 292 DRVWTCKFWTLENCVKLDKCSRVSK 316 (316)
Q Consensus 292 ~~~WsC~~CT~~N~~~~~~C~~C~~ 316 (316)
..+|.|..|||.|.....+|.+|++
T Consensus 5 ~g~W~C~~C~~~N~~~~~kC~aC~t 29 (33)
T 3gj3_B 5 SGTWDCDTCLVQNKPEAVKCVACET 29 (33)
T ss_dssp -CCEECTTTCCEECTTCSBCTTTCC
T ss_pred CCceeCCcccCCCccccCEEcccCC
Confidence 4579999999999999999999985
No 8
>2crc_A Ubiquitin conjugating enzyme 7 interacting protein 3; ZF-ranbp domain, hepatitis B virus X-associated protein 4, HBV associated factor 4; NMR {Homo sapiens}
Probab=97.62 E-value=2.5e-05 Score=56.57 Aligned_cols=25 Identities=20% Similarity=0.305 Sum_probs=21.6
Q ss_pred CCceeeccCCcccCcCccccccCCC
Q 038987 292 DRVWTCKFWTLENCVKLDKCSRVSK 316 (316)
Q Consensus 292 ~~~WsC~~CT~~N~~~~~~C~~C~~ 316 (316)
+..|+|++|||.|......|+||++
T Consensus 8 ~~~W~Cp~CTf~N~p~~~~CemC~~ 32 (52)
T 2crc_A 8 PVGWQCPGCTFINKPTRPGCEMCCR 32 (52)
T ss_dssp SSSBCCTTTCCCBCTTCSSCSSSCC
T ss_pred CCCccCCCcccccCCCCCeeCCCCC
Confidence 4579999999999999999999974
No 9
>1nj3_A NPL4; NZF domain, rubredoxin knuckle, beta-ribbon, zinc- finger, ubiquitin, protein binding; NMR {Rattus norvegicus} SCOP: g.41.11.1 PDB: 1q5w_A
Probab=97.57 E-value=2.6e-05 Score=50.19 Aligned_cols=23 Identities=39% Similarity=0.975 Sum_probs=20.5
Q ss_pred CCccccCcceeccCC----CCCCCCCC
Q 038987 264 PAMWECKACTFLNHG----CGSVPHQG 286 (316)
Q Consensus 264 ~~~W~C~~CTllN~~----C~~C~rPr 286 (316)
...|.|+.|||+|++ |..|..||
T Consensus 4 ~~~W~C~~CTf~N~~~~~~Ce~C~~~r 30 (31)
T 1nj3_A 4 SAMWACQHCTFMNQPGTGHCEMCSLPR 30 (31)
T ss_dssp SCCEECSSSCCEECSSCSSCSSSCCCC
T ss_pred CccccCCcccccCCCCCCccCCcCCCC
Confidence 358999999999999 99998776
No 10
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=97.54 E-value=1.2e-05 Score=82.33 Aligned_cols=54 Identities=19% Similarity=0.378 Sum_probs=0.0
Q ss_pred CCCccccCcceeccCC-------------CCCCCCCCCCC----------------------CCCCceeeccCCcccCcC
Q 038987 263 EPAMWECKACTFLNHG-------------CGSVPHQGDAS----------------------ANDRVWTCKFWTLENCVK 307 (316)
Q Consensus 263 ~~~~W~C~~CTllN~~-------------C~~C~rPr~~~----------------------~~~~~WsC~~CT~~N~~~ 307 (316)
....|.|+.|.|-|+. |..|.=+.... +....-.|+.|||.|-+.
T Consensus 114 ~~~tWvC~ICsfsN~~~~~f~~~~~~~p~C~~CGi~p~~~~~k~~i~~~~~~~~~~~~~~~~~~~~~~~CP~CTF~NHPs 193 (566)
T 1w7p_D 114 VVSTWVCPICMVSNETQGEFTKDTLPTPICINCGVPADYELTKSSINCSNAIDPNANPQNQFGVNSENICPACTFANHPQ 193 (566)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccceeccccccCCCCCCCCCcccCCCCcccccCCCCchhhhhhhhhccccCCCcccCccccccccCCCCCcccccCChh
Confidence 4568999999999994 88883322110 011246799999999999
Q ss_pred ccccccCCC
Q 038987 308 LDKCSRVSK 316 (316)
Q Consensus 308 ~~~C~~C~~ 316 (316)
...|||||+
T Consensus 194 l~~CEiCg~ 202 (566)
T 1w7p_D 194 IGNCEICGH 202 (566)
T ss_dssp ---------
T ss_pred hhcccccCC
Confidence 999999985
No 11
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.41 E-value=0.00012 Score=52.99 Aligned_cols=26 Identities=27% Similarity=0.756 Sum_probs=22.6
Q ss_pred CCCccccCcceeccCC----CCCCCCCCCC
Q 038987 263 EPAMWECKACTFLNHG----CGSVPHQGDA 288 (316)
Q Consensus 263 ~~~~W~C~~CTllN~~----C~~C~rPr~~ 288 (316)
....|.|+.|||+|++ |..|..||..
T Consensus 8 ~~~~W~C~~CT~~N~~~~~~C~~C~~pr~~ 37 (53)
T 2d9g_A 8 DEGYWDCSVCTFRNSAEAFKCMMCDVRKGT 37 (53)
T ss_dssp CCCCEECSSSCCEECSSCSSCSSSCCCCCC
T ss_pred CCCCcCCCCCccCCCCCCCccCCCCCcCCc
Confidence 3458999999999999 9999888864
No 12
>3b08_B Ranbp-type and C3HC4-type zinc finger-containing; protein complex, signaling protein-metal binding protein COM; HET: TRE; 1.70A {Mus musculus} PDB: 3b0a_B*
Probab=97.38 E-value=7e-05 Score=56.39 Aligned_cols=25 Identities=20% Similarity=0.305 Sum_probs=22.5
Q ss_pred CCceeeccCCcccCcCccccccCCC
Q 038987 292 DRVWTCKFWTLENCVKLDKCSRVSK 316 (316)
Q Consensus 292 ~~~WsC~~CT~~N~~~~~~C~~C~~ 316 (316)
...|+|++|||.|......|+||++
T Consensus 6 ~~~W~CP~CTf~N~p~~p~CEmC~~ 30 (64)
T 3b08_B 6 PVGWQCPGCTFINKPTRPGCEMCCR 30 (64)
T ss_dssp CCSEECTTTCCEECTTCSBCTTTCC
T ss_pred CCCCcCCCccccCCCCCCccCcCCC
Confidence 3479999999999999999999985
No 13
>3gj3_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1 PDB: 2gqe_A
Probab=97.36 E-value=5.9e-05 Score=49.83 Aligned_cols=24 Identities=21% Similarity=0.663 Sum_probs=20.5
Q ss_pred CCCccccCcceeccCC----CCCCCCCC
Q 038987 263 EPAMWECKACTFLNHG----CGSVPHQG 286 (316)
Q Consensus 263 ~~~~W~C~~CTllN~~----C~~C~rPr 286 (316)
...+|.|+.|||.|++ |.+|+.|+
T Consensus 4 ~~g~W~C~~C~~~N~~~~~kC~aC~tpk 31 (33)
T 3gj3_B 4 GSGTWDCDTCLVQNKPEAVKCVACETPK 31 (33)
T ss_dssp --CCEECTTTCCEECTTCSBCTTTCCBC
T ss_pred CCCceeCCcccCCCccccCEEcccCCCC
Confidence 4578999999999999 99998876
No 14
>2crc_A Ubiquitin conjugating enzyme 7 interacting protein 3; ZF-ranbp domain, hepatitis B virus X-associated protein 4, HBV associated factor 4; NMR {Homo sapiens}
Probab=97.16 E-value=0.00023 Score=51.48 Aligned_cols=24 Identities=29% Similarity=0.769 Sum_probs=20.7
Q ss_pred CccccCcceeccCC----CCCCCCCCCC
Q 038987 265 AMWECKACTFLNHG----CGSVPHQGDA 288 (316)
Q Consensus 265 ~~W~C~~CTllN~~----C~~C~rPr~~ 288 (316)
..|.|+.|||+|++ |+.|..|+..
T Consensus 9 ~~W~Cp~CTf~N~p~~~~CemC~~prp~ 36 (52)
T 2crc_A 9 VGWQCPGCTFINKPTRPGCEMCCRARPE 36 (52)
T ss_dssp SSBCCTTTCCCBCTTCSSCSSSCCCCCT
T ss_pred CCccCCCcccccCCCCCeeCCCCCcCCc
Confidence 48999999999999 9999777643
No 15
>3gj5_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1
Probab=96.70 E-value=0.00071 Score=44.96 Aligned_cols=25 Identities=20% Similarity=0.518 Sum_probs=22.3
Q ss_pred CCceeeccCCcccCcCccccccCCC
Q 038987 292 DRVWTCKFWTLENCVKLDKCSRVSK 316 (316)
Q Consensus 292 ~~~WsC~~CT~~N~~~~~~C~~C~~ 316 (316)
...|.|..|++.|.....+|.+|++
T Consensus 5 ~G~W~C~~C~v~N~~~~~kC~aCet 29 (34)
T 3gj5_B 5 SGSWDCEVCLVQNKADSTKCIACES 29 (34)
T ss_dssp -CCEECTTTCCEECSSCSBCTTTCC
T ss_pred CCceECCeeEeECccccCEEcccCC
Confidence 3479999999999999999999985
No 16
>3b08_B Ranbp-type and C3HC4-type zinc finger-containing; protein complex, signaling protein-metal binding protein COM; HET: TRE; 1.70A {Mus musculus} PDB: 3b0a_B*
Probab=96.46 E-value=0.0011 Score=49.96 Aligned_cols=24 Identities=29% Similarity=0.769 Sum_probs=20.8
Q ss_pred CccccCcceeccCC----CCCCCCCCCC
Q 038987 265 AMWECKACTFLNHG----CGSVPHQGDA 288 (316)
Q Consensus 265 ~~W~C~~CTllN~~----C~~C~rPr~~ 288 (316)
..|.|+.|||+|++ |..|..|+..
T Consensus 7 ~~W~CP~CTf~N~p~~p~CEmC~~prp~ 34 (64)
T 3b08_B 7 VGWQCPGCTFINKPTRPGCEMCCRARPE 34 (64)
T ss_dssp CSEECTTTCCEECTTCSBCTTTCCBCCS
T ss_pred CCCcCCCccccCCCCCCccCcCCCCCCc
Confidence 47999999999999 9999777644
No 17
>2ebq_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.15 E-value=0.0029 Score=44.84 Aligned_cols=26 Identities=19% Similarity=0.348 Sum_probs=22.8
Q ss_pred CCCceeeccCCcccCcCccccccCCC
Q 038987 291 NDRVWTCKFWTLENCVKLDKCSRVSK 316 (316)
Q Consensus 291 ~~~~WsC~~CT~~N~~~~~~C~~C~~ 316 (316)
....|.|..|++.|.....+|.+|++
T Consensus 8 ~~g~W~C~~C~v~N~a~~~kC~aCet 33 (47)
T 2ebq_A 8 VIGTWDCDTCLVQNKPEAIKCVACET 33 (47)
T ss_dssp CSSSEECSSSCCEECSSCSBCSSSCC
T ss_pred CCCceECCeeeccCccCCceecCcCC
Confidence 44579999999999999999999985
No 18
>3gj5_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1
Probab=95.68 E-value=0.004 Score=41.33 Aligned_cols=25 Identities=20% Similarity=0.632 Sum_probs=20.3
Q ss_pred CCCccccCcceeccCC----CCCCCCCCC
Q 038987 263 EPAMWECKACTFLNHG----CGSVPHQGD 287 (316)
Q Consensus 263 ~~~~W~C~~CTllN~~----C~~C~rPr~ 287 (316)
...+|.|..|++.|.+ |.+|+.|+.
T Consensus 4 ~~G~W~C~~C~v~N~~~~~kC~aCet~Kp 32 (34)
T 3gj5_B 4 GSGSWDCEVCLVQNKADSTKCIACESAKP 32 (34)
T ss_dssp --CCEECTTTCCEECSSCSBCTTTCCBC-
T ss_pred CCCceECCeeEeECccccCEEcccCCcCC
Confidence 4578999999999999 999988763
No 19
>2ebr_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.53 E-value=0.0066 Score=42.96 Aligned_cols=26 Identities=19% Similarity=0.535 Sum_probs=22.6
Q ss_pred CCCceeeccCCcccCcCccccccCCC
Q 038987 291 NDRVWTCKFWTLENCVKLDKCSRVSK 316 (316)
Q Consensus 291 ~~~~WsC~~CT~~N~~~~~~C~~C~~ 316 (316)
....|.|..|.+.|.....+|.+|++
T Consensus 8 ~~gsW~C~~C~v~N~a~~~kC~aC~~ 33 (47)
T 2ebr_A 8 PEGSWDCELCLVQNKADSTKCLACES 33 (47)
T ss_dssp CCSSCCCSSSCCCCCSSCSBCSSSCC
T ss_pred CCCeeECCeeecCCcCCcceecCcCC
Confidence 34579999999999999999999975
No 20
>2ebq_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.84 E-value=0.017 Score=40.91 Aligned_cols=27 Identities=19% Similarity=0.555 Sum_probs=22.8
Q ss_pred CCCccccCcceeccCC----CCCCCCCCCCC
Q 038987 263 EPAMWECKACTFLNHG----CGSVPHQGDAS 289 (316)
Q Consensus 263 ~~~~W~C~~CTllN~~----C~~C~rPr~~~ 289 (316)
....|.|..|++.|.. |.+|+-|+...
T Consensus 8 ~~g~W~C~~C~v~N~a~~~kC~aCetpKpgs 38 (47)
T 2ebq_A 8 VIGTWDCDTCLVQNKPEAIKCVACETPKPGT 38 (47)
T ss_dssp CSSSEECSSSCCEECSSCSBCSSSCCBCSCS
T ss_pred CCCceECCeeeccCccCCceecCcCCCCCCC
Confidence 3468999999999999 99998887543
No 21
>2ebr_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.66 E-value=0.027 Score=39.84 Aligned_cols=26 Identities=19% Similarity=0.617 Sum_probs=22.4
Q ss_pred CCccccCcceeccCC----CCCCCCCCCCC
Q 038987 264 PAMWECKACTFLNHG----CGSVPHQGDAS 289 (316)
Q Consensus 264 ~~~W~C~~CTllN~~----C~~C~rPr~~~ 289 (316)
...|.|..|.+.|.. |.+|+.|+...
T Consensus 9 ~gsW~C~~C~v~N~a~~~kC~aC~~pkpg~ 38 (47)
T 2ebr_A 9 EGSWDCELCLVQNKADSTKCLACESAKPGT 38 (47)
T ss_dssp CSSCCCSSSCCCCCSSCSBCSSSCCBCCCC
T ss_pred CCeeECCeeecCCcCCcceecCcCCCCCCC
Confidence 468999999999999 99998887553
No 22
>3gj7_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.93A {Rattus norvegicus} PDB: 2k0c_A 3ch5_B* 3gj6_B*
Probab=94.61 E-value=0.011 Score=47.44 Aligned_cols=24 Identities=21% Similarity=0.632 Sum_probs=20.7
Q ss_pred CCCccccCcceeccCC----CCCCCCCC
Q 038987 263 EPAMWECKACTFLNHG----CGSVPHQG 286 (316)
Q Consensus 263 ~~~~W~C~~CTllN~~----C~~C~rPr 286 (316)
...+|.|..|||.|.. |.+|+.|+
T Consensus 69 ~~g~W~C~~C~~~N~~~~~~C~aC~tpk 96 (98)
T 3gj7_B 69 AIGTWDCDTCLVQNKPEAVKCVACETPK 96 (98)
T ss_dssp --CCEECTTTCCEECTTCSBCTTTCCBC
T ss_pred CCCcccCCcCcCCChhhcceecccCCCC
Confidence 3578999999999999 99999886
No 23
>2ebv_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.13 E-value=0.07 Score=39.17 Aligned_cols=23 Identities=30% Similarity=0.709 Sum_probs=16.3
Q ss_pred CCccccCcceeccCC----CCCCCCCC
Q 038987 264 PAMWECKACTFLNHG----CGSVPHQG 286 (316)
Q Consensus 264 ~~~W~C~~CTllN~~----C~~C~rPr 286 (316)
...|.|..|.+.|.. |.+|+-|+
T Consensus 29 ~GsWeC~~C~V~N~a~~~kC~ACetpK 55 (57)
T 2ebv_A 29 IGSWECSVCCVSNNAEDNKCVSCMSEK 55 (57)
T ss_dssp SSSCCCSSSCCCCCSSCSBCSSSCCBC
T ss_pred CCeeeCCeeEccCccCCceeeEcCCcC
Confidence 457777777777777 77776654
No 24
>2ebv_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.75 E-value=0.032 Score=40.99 Aligned_cols=26 Identities=19% Similarity=0.428 Sum_probs=23.6
Q ss_pred CCCceeeccCCcccCcCccccccCCC
Q 038987 291 NDRVWTCKFWTLENCVKLDKCSRVSK 316 (316)
Q Consensus 291 ~~~~WsC~~CT~~N~~~~~~C~~C~~ 316 (316)
....|.|..|.+.|.....+|.+|++
T Consensus 28 ~~GsWeC~~C~V~N~a~~~kC~ACet 53 (57)
T 2ebv_A 28 PIGSWECSVCCVSNNAEDNKCVSCMS 53 (57)
T ss_dssp CSSSCCCSSSCCCCCSSCSBCSSSCC
T ss_pred CCCeeeCCeeEccCccCCceeeEcCC
Confidence 44579999999999999999999985
No 25
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.00 E-value=0.048 Score=43.55 Aligned_cols=42 Identities=17% Similarity=0.170 Sum_probs=28.3
Q ss_pred ccccccCCccEEEEeeecCCCCCCCCChHHHHHHHHHHhhhcCCCCC
Q 038987 19 ALGSNLGAGVHIKLLLRKLNRDRESLPFHEVLDTMLHELCHNDIAPH 65 (316)
Q Consensus 19 lLGlN~N~G~~I~LRLR~~~~~~~flP~~~I~~vllHELaH~~~~~H 65 (316)
.+|...+ +..|.|..-... .++.+.|..||.|||+|+.++++
T Consensus 58 ~~g~~~~-~~~i~v~~gLl~----~l~~~El~aVlaHElgH~~~~h~ 99 (107)
T 3cqb_A 58 ATGAKRD-DSLVAVSTGLLH----NMTRDEAEAVLAHEVSHIANGDM 99 (107)
T ss_dssp EECCC---CCEEEEEHHHHH----HSCHHHHHHHHHHHHHHHHTTCE
T ss_pred EEecCCC-CCEEEEcHHHHh----hCCHHHHHHHHHHHHHHHHCCCH
Confidence 5564433 335666654331 35889999999999999998764
No 26
>3gj8_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.82A {Rattus norvegicus} PDB: 3gj4_B*
Probab=90.94 E-value=0.082 Score=41.61 Aligned_cols=24 Identities=21% Similarity=0.657 Sum_probs=20.8
Q ss_pred CCccccCcceeccCC----CCCCCCCCC
Q 038987 264 PAMWECKACTFLNHG----CGSVPHQGD 287 (316)
Q Consensus 264 ~~~W~C~~CTllN~~----C~~C~rPr~ 287 (316)
...|.|+.|++.|+. |..|..|+.
T Consensus 63 ~g~W~C~~C~~~N~a~~~~C~~C~~pkp 90 (92)
T 3gj8_B 63 EGSWDCEVCLVQNKADSTKCIACESAKP 90 (92)
T ss_dssp -CCEECTTTCCEECSSCSBCTTTCCBCC
T ss_pred CCcccCCcCCcCChhhcccccccCCCCC
Confidence 478999999999999 999988864
No 27
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=86.76 E-value=0.13 Score=52.79 Aligned_cols=21 Identities=43% Similarity=0.776 Sum_probs=0.0
Q ss_pred CccccCcceeccCC----CCCCCCC
Q 038987 265 AMWECKACTFLNHG----CGSVPHQ 285 (316)
Q Consensus 265 ~~W~C~~CTllN~~----C~~C~rP 285 (316)
+.-+||.|||+|+| |+.|..|
T Consensus 179 ~~~~CP~CTF~NHPsl~~CEiCg~~ 203 (566)
T 1w7p_D 179 SENICPACTFANHPQIGNCEICGHR 203 (566)
T ss_dssp -------------------------
T ss_pred cCCCCCcccccCChhhhcccccCCc
Confidence 35679999999999 9999544
No 28
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=86.22 E-value=0.49 Score=30.64 Aligned_cols=23 Identities=26% Similarity=0.700 Sum_probs=16.9
Q ss_pred CccccCcceeccCC----CCCCCCCCC
Q 038987 265 AMWECKACTFLNHG----CGSVPHQGD 287 (316)
Q Consensus 265 ~~W~C~~CTllN~~----C~~C~rPr~ 287 (316)
.-|.|+.|-.+|.. |-.|..|+.
T Consensus 5 gDW~C~~C~~~Nfa~R~~C~~C~~pk~ 31 (33)
T 2k1p_A 5 NDWQCKTCSNVNWARRSECNMCNTPKY 31 (33)
T ss_dssp SSCBCSSSCCBCCTTCSBCSSSCCBTT
T ss_pred CCcccCCCCCccccccccccccCCcCC
Confidence 45888888888877 777766653
No 29
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=85.36 E-value=0.33 Score=31.26 Aligned_cols=22 Identities=23% Similarity=0.554 Sum_probs=11.4
Q ss_pred CccccCcceeccCC----CCCCCCCC
Q 038987 265 AMWECKACTFLNHG----CGSVPHQG 286 (316)
Q Consensus 265 ~~W~C~~CTllN~~----C~~C~rPr 286 (316)
..|.|+.|.++|.. |-.|..|+
T Consensus 4 gDW~C~~C~~~Nfa~r~~C~~C~~pr 29 (32)
T 2lk0_A 4 EDWLCNKCCLNNFRKRLKCFRCGADK 29 (32)
T ss_dssp SEEECTTTCCEEETTCCBCTTTCCBT
T ss_pred CCCCcCcCcCCcChhcceecCCCCcC
Confidence 34555555555555 55554443
No 30
>2j9u_B VPS36, vacuolar protein sorting-associated protein 36; zinc-finger, metal-binding, protein transport; 2.00A {Saccharomyces cerevisiae} SCOP: g.41.11.1
Probab=85.24 E-value=0.26 Score=38.07 Aligned_cols=15 Identities=27% Similarity=0.736 Sum_probs=10.0
Q ss_pred CCccccCcceeccCC
Q 038987 264 PAMWECKACTFLNHG 278 (316)
Q Consensus 264 ~~~W~C~~CTllN~~ 278 (316)
...|.|+.|.|.|+.
T Consensus 15 ~~tWVCpICsfsN~v 29 (76)
T 2j9u_B 15 VSTWVCPICMVSNET 29 (76)
T ss_dssp CEEEECTTTCCEEEE
T ss_pred ccceECccccccCcC
Confidence 346777777777666
No 31
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=84.47 E-value=0.4 Score=30.84 Aligned_cols=24 Identities=33% Similarity=0.520 Sum_probs=21.9
Q ss_pred CceeeccCCcccCcCccccccCCC
Q 038987 293 RVWTCKFWTLENCVKLDKCSRVSK 316 (316)
Q Consensus 293 ~~WsC~~CT~~N~~~~~~C~~C~~ 316 (316)
.-|.|..|.+.|...-..|-.|++
T Consensus 4 gDW~C~~C~~~Nfa~r~~C~~C~~ 27 (32)
T 2lk0_A 4 EDWLCNKCCLNNFRKRLKCFRCGA 27 (32)
T ss_dssp SEEECTTTCCEEETTCCBCTTTCC
T ss_pred CCCCcCcCcCCcChhcceecCCCC
Confidence 359999999999999999999984
No 32
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=81.93 E-value=0.73 Score=29.82 Aligned_cols=23 Identities=22% Similarity=0.525 Sum_probs=21.4
Q ss_pred ceeeccCCcccCcCccccccCCC
Q 038987 294 VWTCKFWTLENCVKLDKCSRVSK 316 (316)
Q Consensus 294 ~WsC~~CT~~N~~~~~~C~~C~~ 316 (316)
-|.|..|...|...-..|-.|++
T Consensus 6 DW~C~~C~~~Nfa~R~~C~~C~~ 28 (33)
T 2k1p_A 6 DWQCKTCSNVNWARRSECNMCNT 28 (33)
T ss_dssp SCBCSSSCCBCCTTCSBCSSSCC
T ss_pred CcccCCCCCccccccccccccCC
Confidence 59999999999999999999974
No 33
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=81.29 E-value=0.58 Score=34.22 Aligned_cols=37 Identities=24% Similarity=0.518 Sum_probs=26.6
Q ss_pred CccccCc--c-eeccCCCCCCCCCCCCCCCCCceeeccCCcccCcCc
Q 038987 265 AMWECKA--C-TFLNHGCGSVPHQGDASANDRVWTCKFWTLENCVKL 308 (316)
Q Consensus 265 ~~W~C~~--C-TllN~~C~~C~rPr~~~~~~~~WsC~~CT~~N~~~~ 308 (316)
..=.|.. | +|+|+-|.. . ...+.|.|.+|...|....
T Consensus 8 ~pvRC~r~~CraylNP~~~~-~------~~~~~W~C~~C~~~N~~P~ 47 (59)
T 2yrc_A 8 EPVLCSRTTCRAVLNPLCQV-D------YRAKLWACNFCYQRNQFPP 47 (59)
T ss_dssp CCCBCSCTTTCCBCCTTSEE-E------GGGTEEECSSSCCEEECCS
T ss_pred CCcccCCCCCCeEECCceEE-E------CCCCEEEcccCCCcCCCCH
Confidence 3456776 7 688888776 2 1235799999999997653
No 34
>2ddf_A ADAM 17; hydrolase; HET: INN CIT; 1.70A {Homo sapiens} PDB: 2fv5_A* 3l0v_A* 3kme_A* 3l0t_A* 3kmc_A* 3le9_A* 3lea_A* 3lgp_A* 3o64_A* 3ewj_A* 3edz_A* 3e8r_A* 2fv9_A* 1zxc_A* 2oi0_A* 3b92_A* 2a8h_A* 1bkc_A* 3cki_A 1bkc_I* ...
Probab=79.27 E-value=0.97 Score=40.52 Aligned_cols=26 Identities=35% Similarity=0.172 Sum_probs=21.6
Q ss_pred CChHHHHHHHHHHhhhcCCCCCChhH
Q 038987 44 LPFHEVLDTMLHELCHNDIAPHDAKF 69 (316)
Q Consensus 44 lP~~~I~~vllHELaH~~~~~H~~~F 69 (316)
.+....-.||+|||.|+.-++||...
T Consensus 177 ~~~~~~a~~~AHElGHnlG~~HD~~~ 202 (257)
T 2ddf_A 177 ILTKEADLVTTHELGHNFGAEHDPDG 202 (257)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCCCCTT
T ss_pred cccceeeeeeeeehhhhcCcccCCCC
Confidence 44555789999999999999999753
No 35
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=78.51 E-value=0.72 Score=41.70 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=29.4
Q ss_pred ccEEEEeeecCCCCCCCC-ChHHHHHHHHHHhhhcCCCCCChhHH
Q 038987 27 GVHIKLLLRKLNRDRESL-PFHEVLDTMLHELCHNDIAPHDAKFY 70 (316)
Q Consensus 27 G~~I~LRLR~~~~~~~fl-P~~~I~~vllHELaH~~~~~H~~~Fy 70 (316)
|..|.|.--... .+ +.+.|..||.|||+|++++++-..+.
T Consensus 81 gg~I~v~~gLl~----~l~~~~ELaaVLaHElgH~~~~H~~~~~~ 121 (253)
T 3c37_A 81 GGRVYVHTGLLK----AADNETELAGVLAHEINHAVARHGTRQMT 121 (253)
T ss_dssp TTEEEEEHHHHH----HCSSHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred CCeEEeeHHHHh----hCCCHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 347777665542 34 77999999999999999886655443
No 36
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=76.55 E-value=4.5 Score=31.76 Aligned_cols=46 Identities=13% Similarity=0.319 Sum_probs=31.5
Q ss_pred CCCCccccCcceeccCC--CCCCCC--------CCCCCCCCCceeeccCCcccCcC
Q 038987 262 EEPAMWECKACTFLNHG--CGSVPH--------QGDASANDRVWTCKFWTLENCVK 307 (316)
Q Consensus 262 ~~~~~W~C~~CTllN~~--C~~C~r--------Pr~~~~~~~~WsC~~CT~~N~~~ 307 (316)
.....+.|..|---... |..|.+ |.+...+...|.|+.|...+..+
T Consensus 21 ~d~n~~~C~vC~~~g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~~~k 76 (88)
T 1fp0_A 21 LDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPDLK 76 (88)
T ss_dssp SSSSSSCCSSSCSSSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCCSSC
T ss_pred cCCCCCcCcCcCCCCCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCCccc
Confidence 44457789999866555 777744 34444455689999999877654
No 37
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=75.77 E-value=3.1 Score=28.71 Aligned_cols=26 Identities=19% Similarity=0.563 Sum_probs=20.1
Q ss_pred CCCccccC--cceeccCC----CCCCCCCCCC
Q 038987 263 EPAMWECK--ACTFLNHG----CGSVPHQGDA 288 (316)
Q Consensus 263 ~~~~W~C~--~CTllN~~----C~~C~rPr~~ 288 (316)
...-|.|+ .|..+|.. |-.|..|+..
T Consensus 11 ~~GDW~C~~~~C~~~Nfa~R~~C~~C~~pr~~ 42 (45)
T 1n0z_A 11 SDGDWICPDKKCGNVNFARRTSCDRCGREKTT 42 (45)
T ss_dssp CSSSCBCSSTTTCCBCCSSCSBCSSSCCBCCC
T ss_pred CCCCcCCCCCCCCCEEccccccccccCCcCCC
Confidence 34679998 89999988 8888777643
No 38
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A*
Probab=75.67 E-value=1.1 Score=39.09 Aligned_cols=21 Identities=29% Similarity=0.197 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhhcCCCCCChh
Q 038987 48 EVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~H~~~ 68 (316)
.+-.||+|||.|+.-++||..
T Consensus 140 ~~a~~~AHElGHnlG~~HD~~ 160 (217)
T 3b8z_A 140 HAAFTVAHEIGHLLGLSHDDS 160 (217)
T ss_dssp SHHHHHHHHHHHHTTCCCTTS
T ss_pred chhhhhHhhhhhhcCCcCCCC
Confidence 456899999999999999975
No 39
>2i47_A ADAM 17; TACE-inhibitor complex, hydrolase; HET: INN KGY; 1.90A {Homo sapiens} SCOP: d.92.1.10 PDB: 3g42_A*
Probab=75.26 E-value=1.5 Score=40.17 Aligned_cols=25 Identities=36% Similarity=0.248 Sum_probs=21.2
Q ss_pred CChHHHHHHHHHHhhhcCCCCCChh
Q 038987 44 LPFHEVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 44 lP~~~I~~vllHELaH~~~~~H~~~ 68 (316)
++....-.||+|||.|+.-++||..
T Consensus 183 ~~~~~~a~~~AHElGHnlGm~HD~~ 207 (288)
T 2i47_A 183 ILTKEADLVTTHELGHNFGAEHDPD 207 (288)
T ss_dssp CCHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred cchhhHHHHHHHHHHhhcCCccCCC
Confidence 4455578999999999999999975
No 40
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=74.43 E-value=1.4 Score=38.06 Aligned_cols=21 Identities=38% Similarity=0.382 Sum_probs=19.0
Q ss_pred HHHHHHHHHhhhcCCCCCChh
Q 038987 48 EVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~H~~~ 68 (316)
.+..||+|||.|+.-++||..
T Consensus 132 ~~a~~~AHElGH~lG~~HD~~ 152 (197)
T 1bud_A 132 LVAITLAHEMAHNLGVSHDEG 152 (197)
T ss_dssp HHHHHHHHHHHHHTTCCCCCT
T ss_pred HHHHHHHHHHhhhcCCccCCC
Confidence 467899999999999999986
No 41
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=74.35 E-value=1.3 Score=38.30 Aligned_cols=20 Identities=45% Similarity=0.421 Sum_probs=18.7
Q ss_pred HHHHHHHHhhhcCCCCCChh
Q 038987 49 VLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 49 I~~vllHELaH~~~~~H~~~ 68 (316)
+..||+|||.|+.-++||..
T Consensus 135 ~a~~~AHElGH~lG~~HD~~ 154 (197)
T 1qua_A 135 MAVTMAHELGHNLGMNHDGA 154 (197)
T ss_dssp HHHHHHHHHHHHTTCCCCCG
T ss_pred HHHHHHHHHHHhcCCCCCCC
Confidence 67899999999999999987
No 42
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of BAS residues, extracellular matrix, glycoprotein, hydrolase, ME binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=73.97 E-value=1.3 Score=42.12 Aligned_cols=20 Identities=30% Similarity=0.200 Sum_probs=18.3
Q ss_pred HHHHHHHHhhhcCCCCCChh
Q 038987 49 VLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 49 I~~vllHELaH~~~~~H~~~ 68 (316)
+-.||+|||.|+.-++||..
T Consensus 143 ~a~~~AHElGHnlGm~HD~~ 162 (378)
T 2rjq_A 143 AAFTVAHEIGHLLGLSHDDS 162 (378)
T ss_dssp HHHHHHHHHHHHTTCCCTTS
T ss_pred hhhhhhhhhhhhcCccCCCC
Confidence 67899999999999999974
No 43
>2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A*
Probab=73.78 E-value=1.3 Score=40.67 Aligned_cols=20 Identities=40% Similarity=0.336 Sum_probs=18.2
Q ss_pred HHHHHHHHhhhcCCCCCChh
Q 038987 49 VLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 49 I~~vllHELaH~~~~~H~~~ 68 (316)
+-.||+|||.|+.-++||..
T Consensus 143 ~a~t~AHElGHnlG~~HD~~ 162 (300)
T 2v4b_A 143 AAFTTAHELGHVFNMPHDDA 162 (300)
T ss_dssp HHHHHHHHHHHHTTCCCTTS
T ss_pred ceehhhhhhhhhcCCcCCCC
Confidence 67899999999999999964
No 44
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=73.67 E-value=1.5 Score=38.10 Aligned_cols=21 Identities=48% Similarity=0.370 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhcCCCCCChh
Q 038987 48 EVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~H~~~ 68 (316)
.+-.||+|||.|+.-++||..
T Consensus 135 ~~a~~~AHElGHnlG~~HD~~ 155 (202)
T 1atl_A 135 LMGVTMAHELGHNLGMEHDGK 155 (202)
T ss_dssp HHHHHHHHHHHHHTTCCCCCT
T ss_pred eeEEEehhhhccccCceeCCC
Confidence 367899999999999999986
No 45
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=73.39 E-value=1.5 Score=37.96 Aligned_cols=21 Identities=48% Similarity=0.348 Sum_probs=19.1
Q ss_pred HHHHHHHHHhhhcCCCCCChh
Q 038987 48 EVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~H~~~ 68 (316)
.+-.||+|||.|+.-++||..
T Consensus 135 ~~a~~~AHElGH~lG~~HD~~ 155 (202)
T 2w15_A 135 WVAVTMAHELGHNLGIHHDTG 155 (202)
T ss_dssp HHHHHHHHHHHHHTTCCCCCT
T ss_pred HHHHHHHHHHhhhcCCccCCC
Confidence 467899999999999999976
No 46
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=72.83 E-value=1.5 Score=38.15 Aligned_cols=21 Identities=52% Similarity=0.447 Sum_probs=19.2
Q ss_pred HHHHHHHHHhhhcCCCCCChh
Q 038987 48 EVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~H~~~ 68 (316)
.+-.||+|||.|+.-++||..
T Consensus 137 ~~a~~~AHElGH~lG~~HD~~ 157 (203)
T 1kuf_A 137 MVAVTMTHELGHNLGMEHDDK 157 (203)
T ss_dssp HHHHHHHHHHHHHTTCCCCCT
T ss_pred hhHHHHHHHhhhhcCCCCCCC
Confidence 477899999999999999987
No 47
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=72.82 E-value=1.5 Score=38.04 Aligned_cols=22 Identities=36% Similarity=0.336 Sum_probs=19.3
Q ss_pred HHHHHHHHHhhhcCCCCCChhH
Q 038987 48 EVLDTMLHELCHNDIAPHDAKF 69 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~H~~~F 69 (316)
.+..||+|||.|+.-++||...
T Consensus 134 ~~a~~~AHElGH~lG~~HD~~~ 155 (202)
T 1yp1_A 134 LMAVVMAHELGHNLGMLHDDGY 155 (202)
T ss_dssp HHHHHHHHHHHHHTTCCCCCTT
T ss_pred HHHHHHHHHHHHhcCCCCCCCC
Confidence 3678999999999999999873
No 48
>2rjp_A Adamts-4; metalloprotease domain, aggrecanase, cleavage on PAIR of basic residues, extracellular matrix, glycoprotein, hydrolase, metal-binding; HET: 886; 2.80A {Homo sapiens} PDB: 3b2z_A
Probab=72.48 E-value=1.5 Score=40.71 Aligned_cols=21 Identities=29% Similarity=0.150 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhcCCCCCChh
Q 038987 48 EVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~H~~~ 68 (316)
.+-.||+|||.|+.-++||..
T Consensus 142 ~~a~t~AHElGHnlGm~HD~~ 162 (316)
T 2rjp_A 142 QSAFTAAHQLGHVFNMLHDNS 162 (316)
T ss_dssp THHHHHHHHHHHHTTCCCTTS
T ss_pred hHHHHHHHHHHhhcCccCCCC
Confidence 567899999999999999975
No 49
>4dd8_A Disintegrin and metalloproteinase domain-containi 8; batimastat, inflammation, alpha/beta motif, metalloproteinas allergic asthma, tumorigenesis; HET: BAT; 2.10A {Homo sapiens}
Probab=72.22 E-value=2 Score=37.52 Aligned_cols=23 Identities=39% Similarity=0.289 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHhhhcCCCCCChh
Q 038987 46 FHEVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 46 ~~~I~~vllHELaH~~~~~H~~~ 68 (316)
+..+-.||+|||.|+.-++||..
T Consensus 130 ~~~~a~~~AHElGH~lG~~HD~~ 152 (208)
T 4dd8_A 130 PVGVACTMAHEMGHNLGMDHDEN 152 (208)
T ss_dssp HHHHHHHHHHHHHHHTTCCCGGG
T ss_pred hhHHHHHHHHHHHHHcCCcCCCC
Confidence 34456899999999999999964
No 50
>2j9u_B VPS36, vacuolar protein sorting-associated protein 36; zinc-finger, metal-binding, protein transport; 2.00A {Saccharomyces cerevisiae} SCOP: g.41.11.1
Probab=71.46 E-value=0.82 Score=35.33 Aligned_cols=23 Identities=17% Similarity=0.511 Sum_probs=18.9
Q ss_pred CceeeccCCcccCcCcc---------ccccCC
Q 038987 293 RVWTCKFWTLENCVKLD---------KCSRVS 315 (316)
Q Consensus 293 ~~WsC~~CT~~N~~~~~---------~C~~C~ 315 (316)
..|.|+.|.|.|...+. .|.+||
T Consensus 16 ~tWVCpICsfsN~v~s~fdp~~~~lPpC~aCG 47 (76)
T 2j9u_B 16 STWVCPICMVSNETQGEFTKDTLPTPICINCG 47 (76)
T ss_dssp EEEECTTTCCEEEESSCCCTTCSSCCBCTTTC
T ss_pred cceECccccccCcCccccCCCCCCCCcccccC
Confidence 47999999999987666 477786
No 51
>2cr8_A MDM4 protein; ZF-ranbp domain, P53-binding protein MDM4, MDM2-like P53-binding DE protein, MDMX protein, double minute 4 protein; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=70.75 E-value=2.9 Score=30.09 Aligned_cols=23 Identities=22% Similarity=0.504 Sum_probs=19.3
Q ss_pred CCccccCcceeccCC----CCCCCCCC
Q 038987 264 PAMWECKACTFLNHG----CGSVPHQG 286 (316)
Q Consensus 264 ~~~W~C~~CTllN~~----C~~C~rPr 286 (316)
...|.|..|--+|+| |..|..-|
T Consensus 9 eD~WkC~~C~k~N~Pl~ryC~rCwaLR 35 (53)
T 2cr8_A 9 EDEWQCTECKKFNSPSKRYCFRCWALR 35 (53)
T ss_dssp SCCEECSSSCCEECSSCCBCTTTCCBC
T ss_pred cceeecccccccCCCccchhHHHHHhh
Confidence 368999999999999 99996544
No 52
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=68.36 E-value=2.1 Score=37.45 Aligned_cols=21 Identities=33% Similarity=0.365 Sum_probs=18.9
Q ss_pred HHHHHHHHHhhhcCCCCCChh
Q 038987 48 EVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~H~~~ 68 (316)
.+-.||+|||.|+.-++||..
T Consensus 135 ~~a~~~AHElGHnlG~~HD~~ 155 (214)
T 1r55_A 135 GAAATMAHEIGHSLGLSHDPD 155 (214)
T ss_dssp HHHHHHHHHHHHHTTCCCCCT
T ss_pred HHHHHHHHHHHHhcCCcCCCC
Confidence 457999999999999999985
No 53
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=68.17 E-value=4.1 Score=28.61 Aligned_cols=40 Identities=13% Similarity=0.223 Sum_probs=26.4
Q ss_pred CCCccccCcceeccCC--CCCCCC--------CCCCCCCCCceeeccCCc
Q 038987 263 EPAMWECKACTFLNHG--CGSVPH--------QGDASANDRVWTCKFWTL 302 (316)
Q Consensus 263 ~~~~W~C~~CTllN~~--C~~C~r--------Pr~~~~~~~~WsC~~CT~ 302 (316)
....+.|..|.--+.. |..|.+ |.+...+...|.|+.|.-
T Consensus 6 ~~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 6 SGHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CSSCCSCSSSCCSSCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCCCccCCCCCeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 3456889999876666 777743 333333456799999853
No 54
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=67.58 E-value=2.7 Score=41.03 Aligned_cols=23 Identities=39% Similarity=0.320 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhhhcCCCCCChhH
Q 038987 47 HEVLDTMLHELCHNDIAPHDAKF 69 (316)
Q Consensus 47 ~~I~~vllHELaH~~~~~H~~~F 69 (316)
..+..||+|||.|+.-++||...
T Consensus 137 ~~~a~t~AHElGHnlGm~HD~~~ 159 (427)
T 2e3x_A 137 FKTAVIMAHELSHNLGMYHDGKN 159 (427)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCTT
T ss_pred ceeeeehHHHHHHhhCCccCCCC
Confidence 45678999999999999999863
No 55
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=66.66 E-value=2.6 Score=41.09 Aligned_cols=23 Identities=39% Similarity=0.382 Sum_probs=20.1
Q ss_pred hHHHHHHHHHHhhhcCCCCCChh
Q 038987 46 FHEVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 46 ~~~I~~vllHELaH~~~~~H~~~ 68 (316)
...+..||+|||.|+.-++||..
T Consensus 143 ~~~~a~t~AHElGHnlG~~HD~~ 165 (427)
T 2ero_A 143 HHLVAIAMAHEMGHNLGMDHDKD 165 (427)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCT
T ss_pred hhHHHHHHHHHHHHhcCCccCCC
Confidence 34667899999999999999986
No 56
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=65.70 E-value=2.8 Score=40.82 Aligned_cols=22 Identities=36% Similarity=0.285 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhhhcCCCCCChh
Q 038987 47 HEVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 47 ~~I~~vllHELaH~~~~~H~~~ 68 (316)
..+..||+|||.|+.-++||..
T Consensus 135 ~~~a~t~AHElGHnlG~~HD~~ 156 (419)
T 2dw0_A 135 LVVAVIMAHEMGHNLGINHDSG 156 (419)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCT
T ss_pred hhhhhhHHHHHHHHcCCccCCC
Confidence 4567899999999999999986
No 57
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=65.51 E-value=2.7 Score=45.06 Aligned_cols=19 Identities=21% Similarity=0.364 Sum_probs=17.0
Q ss_pred hHHHHHHHHHHhhhcCCCC
Q 038987 46 FHEVLDTMLHELCHNDIAP 64 (316)
Q Consensus 46 ~~~I~~vllHELaH~~~~~ 64 (316)
+..|..||+|||+|.++||
T Consensus 292 ~~~i~~vIAHElAHQWFGN 310 (889)
T 3ebh_A 292 YARILTVVGHEYFHQYTGN 310 (889)
T ss_dssp HHHHHHHHHHHHHTTTBTT
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 4568899999999999997
No 58
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=64.90 E-value=3.4 Score=28.51 Aligned_cols=25 Identities=24% Similarity=0.514 Sum_probs=22.4
Q ss_pred CCceeec--cCCcccCcCccccccCCC
Q 038987 292 DRVWTCK--FWTLENCVKLDKCSRVSK 316 (316)
Q Consensus 292 ~~~WsC~--~CT~~N~~~~~~C~~C~~ 316 (316)
..-|.|. .|...|...-..|-.|++
T Consensus 12 ~GDW~C~~~~C~~~Nfa~R~~C~~C~~ 38 (45)
T 1n0z_A 12 DGDWICPDKKCGNVNFARRTSCDRCGR 38 (45)
T ss_dssp SSSCBCSSTTTCCBCCSSCSBCSSSCC
T ss_pred CCCcCCCCCCCCCEEccccccccccCC
Confidence 3469999 899999999999999985
No 59
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=64.86 E-value=2.8 Score=44.52 Aligned_cols=19 Identities=26% Similarity=0.300 Sum_probs=17.1
Q ss_pred hHHHHHHHHHHhhhcCCCC
Q 038987 46 FHEVLDTMLHELCHNDIAP 64 (316)
Q Consensus 46 ~~~I~~vllHELaH~~~~~ 64 (316)
+..|..||+|||+|.++||
T Consensus 284 ~~~i~~vIaHElAHqWfGn 302 (867)
T 2gtq_A 284 FEGIESVVGHEYFHNWTGN 302 (867)
T ss_dssp HHHHHHHHHHHHHTTTBTT
T ss_pred HHHHHHHHHHHHHHHhcCc
Confidence 4578899999999999997
No 60
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A
Probab=64.63 E-value=2.2 Score=42.72 Aligned_cols=25 Identities=28% Similarity=0.244 Sum_probs=21.1
Q ss_pred CChHHHHHHHHHHhhhcCCCCCChh
Q 038987 44 LPFHEVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 44 lP~~~I~~vllHELaH~~~~~H~~~ 68 (316)
++.++|..||.|||.|.+|++--..
T Consensus 324 l~~~El~aVlaHElgH~~~~~~~~~ 348 (482)
T 4aw6_A 324 CKNEEVLAVLGHELGHWKLGHTVKN 348 (482)
T ss_dssp CCHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcccHHHH
Confidence 7889999999999999998764333
No 61
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=63.83 E-value=1.8 Score=43.82 Aligned_cols=20 Identities=15% Similarity=0.182 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHhhhcCCCCC
Q 038987 46 FHEVLDTMLHELCHNDIAPH 65 (316)
Q Consensus 46 ~~~I~~vllHELaH~~~~~H 65 (316)
...+..||+|||||.++||-
T Consensus 284 ~~~~~~viaHElAHqWfGnl 303 (608)
T 3u9w_A 284 DKSLSNVIAHEISHSWTGNL 303 (608)
T ss_dssp SSTTTHHHHHHHHTTTBTTT
T ss_pred cchhHHHHHHHhhhhhhcCc
Confidence 34577899999999999975
No 62
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=63.11 E-value=5 Score=31.67 Aligned_cols=40 Identities=25% Similarity=0.616 Sum_probs=25.8
Q ss_pred CCccccCcceeccCCCCCCCCCCC-----------------------CCCCCCceeeccCCcccCcC
Q 038987 264 PAMWECKACTFLNHGCGSVPHQGD-----------------------ASANDRVWTCKFWTLENCVK 307 (316)
Q Consensus 264 ~~~W~C~~CTllN~~C~~C~rPr~-----------------------~~~~~~~WsC~~CT~~N~~~ 307 (316)
...|.|+.|.+ |.+|.++.. ...+...|.|+.|..-+..+
T Consensus 46 ~~~W~C~~C~~----C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c~~g~ 108 (111)
T 2ysm_A 46 RAGWQCPECKV----CQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICISGP 108 (111)
T ss_dssp STTCCCTTTCC----CTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHCCSCSC
T ss_pred ccCccCCcCCc----ccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcCcCCCC
Confidence 46899999975 665554432 12234579999997655543
No 63
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=62.22 E-value=3.4 Score=44.21 Aligned_cols=20 Identities=20% Similarity=0.285 Sum_probs=17.4
Q ss_pred hHHHHHHHHHHhhhcCCCCC
Q 038987 46 FHEVLDTMLHELCHNDIAPH 65 (316)
Q Consensus 46 ~~~I~~vllHELaH~~~~~H 65 (316)
+..|..||+|||+|.++||-
T Consensus 309 ~~~i~~vIAHElAHqWFGNl 328 (891)
T 3b34_A 309 YLDIERVIGHEYFHNWTGNR 328 (891)
T ss_dssp HHHHHHHHHHHHHTTTBTTT
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 46788999999999999963
No 64
>3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra}
Probab=62.13 E-value=3.3 Score=40.54 Aligned_cols=22 Identities=41% Similarity=0.330 Sum_probs=19.2
Q ss_pred HHHHHHHHHHhhhcCCCCCChh
Q 038987 47 HEVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 47 ~~I~~vllHELaH~~~~~H~~~ 68 (316)
..+-.||+|||.|+.-++||..
T Consensus 142 ~~~a~t~AHElGHnlGm~HD~~ 163 (422)
T 3k7l_A 142 RMVAITMAHEMGHNLGMNHDRG 163 (422)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCS
T ss_pred hhhhHHHHHHHHHHcCCccCCC
Confidence 3567899999999999999975
No 65
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=62.10 E-value=3.3 Score=40.15 Aligned_cols=22 Identities=41% Similarity=0.370 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhhhcCCCCCChh
Q 038987 47 HEVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 47 ~~I~~vllHELaH~~~~~H~~~ 68 (316)
..+-.||+|||.|+.-++||..
T Consensus 137 ~~~a~t~AHElGHnlGm~HD~~ 158 (397)
T 3k7n_A 137 SLVASTITHELGHNLGIHHDKA 158 (397)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCT
T ss_pred chhhhhHHHHHHHHcCCccCCC
Confidence 3567899999999999999975
No 66
>2c6a_A Ubiquitin-protein ligase E3 MDM2; zinc finger, human MDM2, phosphorylation, alternative splicing, metal-binding, nuclear protein, proto- oncogene; NMR {Homo sapiens} SCOP: g.41.11.1 PDB: 2c6b_A
Probab=60.61 E-value=3.7 Score=28.85 Aligned_cols=22 Identities=23% Similarity=0.650 Sum_probs=18.7
Q ss_pred CccccCcceeccCC----CCCCCCCC
Q 038987 265 AMWECKACTFLNHG----CGSVPHQG 286 (316)
Q Consensus 265 ~~W~C~~CTllN~~----C~~C~rPr 286 (316)
..|.|..|--+|+| |..|..-|
T Consensus 12 D~WkC~~C~~~N~Pl~r~C~rCw~LR 37 (46)
T 2c6a_A 12 DYWKCTSCNEMNPPLPSHCNRCWALR 37 (46)
T ss_dssp GCEECTTTCCEECSSCSSCTTTCCCC
T ss_pred ceEecccccccCCCccchhhHHHhhc
Confidence 68999999999999 98886544
No 67
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=60.37 E-value=3.8 Score=42.79 Aligned_cols=19 Identities=16% Similarity=0.260 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHhhhcCCCC
Q 038987 46 FHEVLDTMLHELCHNDIAP 64 (316)
Q Consensus 46 ~~~I~~vllHELaH~~~~~ 64 (316)
+..+..||+|||||.++||
T Consensus 256 ~~~~~~viaHElaHqWfGn 274 (780)
T 1z5h_A 256 KRNSANVIAHEIAHQWFGD 274 (780)
T ss_dssp HHHHHHHHHHHHHHTTBTT
T ss_pred HHHHHHHHHHHHHHHHhCC
Confidence 4568899999999999996
No 68
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=60.14 E-value=3.9 Score=43.45 Aligned_cols=22 Identities=23% Similarity=0.234 Sum_probs=18.4
Q ss_pred CChHHHHHHHHHHhhhcCCCCC
Q 038987 44 LPFHEVLDTMLHELCHNDIAPH 65 (316)
Q Consensus 44 lP~~~I~~vllHELaH~~~~~H 65 (316)
.....|..||+|||||.++||-
T Consensus 311 ~~~~~~~~viaHElAHqWFGnl 332 (909)
T 4fke_A 311 SNKERVVTVIAHELAHQWFGNL 332 (909)
T ss_dssp HHHHHHHHHHHHHHHTTTBTTT
T ss_pred HHHHHHHHHHHHHHHhhhhcCe
Confidence 3455788999999999999976
No 69
>1g12_A Peptidyl-Lys metalloendopeptidase; zinc cordinate,metalloprotease, hydrolase; HET: MAN; 1.60A {Grifola frondosa} SCOP: d.92.1.12 PDB: 1ge5_A* 1ge6_A* 1ge7_A*
Probab=60.05 E-value=2.8 Score=35.91 Aligned_cols=15 Identities=27% Similarity=0.348 Sum_probs=12.7
Q ss_pred HHHHHHHHHHhhhcC
Q 038987 47 HEVLDTMLHELCHND 61 (316)
Q Consensus 47 ~~I~~vllHELaH~~ 61 (316)
..-..||||||+|+.
T Consensus 109 ~s~a~tllHE~tH~~ 123 (167)
T 1g12_A 109 DSQAGTLVHESSHFT 123 (167)
T ss_dssp TCHHHHHHHHHHHSG
T ss_pred CCchhhHHHhhhccc
Confidence 356899999999996
No 70
>4axq_A Archaemetzincin; metalloprotease, protease, hydrolase, metal-bindi; 1.40A {Archaeoglobus fulgidus} PDB: 2xhq_A 3zvs_A 4a3w_A*
Probab=59.58 E-value=9.9 Score=32.66 Aligned_cols=22 Identities=23% Similarity=0.185 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHhhhcCCCCCCh
Q 038987 46 FHEVLDTMLHELCHNDIAPHDA 67 (316)
Q Consensus 46 ~~~I~~vllHELaH~~~~~H~~ 67 (316)
...+..+++|||-|+.-.+|-.
T Consensus 111 ~~r~~k~~~HElGH~lGL~HC~ 132 (163)
T 4axq_A 111 RERVVKEAVHEIGHVLGLKHCS 132 (163)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCS
T ss_pred HHHHHHHHHHHHHHHcCCCCCC
Confidence 5678899999999999999943
No 71
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=59.42 E-value=4 Score=43.28 Aligned_cols=19 Identities=26% Similarity=0.211 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHhhhcCCCC
Q 038987 46 FHEVLDTMLHELCHNDIAP 64 (316)
Q Consensus 46 ~~~I~~vllHELaH~~~~~ 64 (316)
+..|..||+|||||.++||
T Consensus 299 ~~~~~~viaHElAHqWFGn 317 (897)
T 2xdt_A 299 KLGITMTVAHELAHQWFGN 317 (897)
T ss_dssp HHHHHHHHHHHHHTTTBTT
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 4578899999999999996
No 72
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=58.31 E-value=13 Score=26.58 Aligned_cols=41 Identities=20% Similarity=0.356 Sum_probs=26.3
Q ss_pred CCCccccCcceeccCC--CCCCCCC--------CCCCCCCCceeeccCCcc
Q 038987 263 EPAMWECKACTFLNHG--CGSVPHQ--------GDASANDRVWTCKFWTLE 303 (316)
Q Consensus 263 ~~~~W~C~~CTllN~~--C~~C~rP--------r~~~~~~~~WsC~~CT~~ 303 (316)
....+.|..|---+.. |..|.+. .+.......|.|+.|...
T Consensus 6 d~~~~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 6 DHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp CSSCSSCTTTCCCSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred cCCCCcCCCCCCCCCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 3456788888755444 7777543 233334567999999753
No 73
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=57.30 E-value=4.3 Score=33.87 Aligned_cols=36 Identities=36% Similarity=0.280 Sum_probs=22.2
Q ss_pred CccEEEEeeecCCCC--CCCCChHHHHHHHHHHhhhcC
Q 038987 26 AGVHIKLLLRKLNRD--RESLPFHEVLDTMLHELCHND 61 (316)
Q Consensus 26 ~G~~I~LRLR~~~~~--~~flP~~~I~~vllHELaH~~ 61 (316)
.+..|.|=-|..-+. ...--.+.|..||+||++|..
T Consensus 64 ~P~~I~lYR~pi~~~~~~~eeL~~~V~~tvvHEiaHhf 101 (130)
T 2ejq_A 64 LGRHIALYYGSFLEVAGEGFDWEAEVWETMLHELRHHL 101 (130)
T ss_dssp GCCEEEEEHHHHHHHCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEehHHHHHHhCChhhHHHHHHHHHHHHhHHHH
Confidence 356777754432110 113345679999999999964
No 74
>1eb6_A Neutral protease II; metalloproteinase, zinc, hydrolase; 1.0A {Aspergillus oryzae} SCOP: d.92.1.12
Probab=57.17 E-value=3.5 Score=35.62 Aligned_cols=15 Identities=33% Similarity=0.390 Sum_probs=13.2
Q ss_pred HHHHHHHHHhhhcCC
Q 038987 48 EVLDTMLHELCHNDI 62 (316)
Q Consensus 48 ~I~~vllHELaH~~~ 62 (316)
..-.||||||+|+..
T Consensus 121 ~~a~tllHE~tH~~~ 135 (177)
T 1eb6_A 121 DQATTTLHEFTHAPG 135 (177)
T ss_dssp CHHHHHHHHHHTCTT
T ss_pred cHHHHHHHHHHhhhh
Confidence 578999999999974
No 75
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=57.05 E-value=7.2 Score=27.96 Aligned_cols=42 Identities=21% Similarity=0.425 Sum_probs=27.9
Q ss_pred CCCCccccCcceeccCC--CCCCCCC--------CCCCCCCCceeeccCCcc
Q 038987 262 EEPAMWECKACTFLNHG--CGSVPHQ--------GDASANDRVWTCKFWTLE 303 (316)
Q Consensus 262 ~~~~~W~C~~CTllN~~--C~~C~rP--------r~~~~~~~~WsC~~CT~~ 303 (316)
+....+.|..|.--+.. |..|.+. .....+...|.|+.|+.+
T Consensus 7 ~~~~~~~C~vC~~~g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 7 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp SSCCCSSCTTTSCCSSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred cCCCCCCCccCCCCCcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 34456889999764444 8888553 223334568999999865
No 76
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=56.43 E-value=4.6 Score=38.33 Aligned_cols=27 Identities=22% Similarity=0.193 Sum_probs=22.2
Q ss_pred CCCCChHHHHHHHHHHhhhcCCCCCCh
Q 038987 41 RESLPFHEVLDTMLHELCHNDIAPHDA 67 (316)
Q Consensus 41 ~~flP~~~I~~vllHELaH~~~~~H~~ 67 (316)
..|.|+..-+.|+.|||+|=+.-.+..
T Consensus 121 ~~f~~~~~slDVvaHEltHGVt~~ta~ 147 (304)
T 4ger_A 121 STFIAFSGDPDVVGHELTHGVTEYTSN 147 (304)
T ss_dssp SSBCCGGGSHHHHHHHHHHHHHHTTTC
T ss_pred ccccccccccchhhhccccccccccCC
Confidence 468999888999999999988766643
No 77
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=55.94 E-value=3.3 Score=43.77 Aligned_cols=35 Identities=29% Similarity=0.655 Sum_probs=24.3
Q ss_pred ccccCcc-eeccCCCCCCCCCCCCCCCCCceeeccCCcccCcC
Q 038987 266 MWECKAC-TFLNHGCGSVPHQGDASANDRVWTCKFWTLENCVK 307 (316)
Q Consensus 266 ~W~C~~C-TllN~~C~~C~rPr~~~~~~~~WsC~~CT~~N~~~ 307 (316)
.=.|..| +|+|+-|.. . .....|.|.+|...|...
T Consensus 112 pvRC~~CrayiNPf~~~-~------~~g~~W~C~~C~~~N~~P 147 (810)
T 1pcx_A 112 IVRCRRCRSYMNPFVTF-I------EQGRRWRCNFCRLANDVP 147 (810)
T ss_dssp CCBCTTTCCBCCTTCEE-E------TTTTEEECTTTCCEEECC
T ss_pred CCccCCccCEecCceEE-e------CCCCEEEccCCCCcCCCc
Confidence 3457777 577777765 2 134579999999999754
No 78
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=55.84 E-value=4.7 Score=38.13 Aligned_cols=26 Identities=19% Similarity=0.215 Sum_probs=20.7
Q ss_pred CCCCChHHHHHHHHHHhhhcCCCCCC
Q 038987 41 RESLPFHEVLDTMLHELCHNDIAPHD 66 (316)
Q Consensus 41 ~~flP~~~I~~vllHELaH~~~~~H~ 66 (316)
..|.|+..-..|++|||+|=+.-...
T Consensus 130 ~~f~~~~~~lDVv~HE~tHGVt~~~a 155 (301)
T 1bqb_A 130 RTFTNLSGANDVVAHEITHGVTQQTA 155 (301)
T ss_dssp SSBSCGGGCHHHHHHHHHHHHHHHTT
T ss_pred cccCCcccccceeeeecccceecccC
Confidence 35889987889999999998765443
No 79
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=53.53 E-value=3.9 Score=44.08 Aligned_cols=35 Identities=29% Similarity=0.655 Sum_probs=24.0
Q ss_pred ccccCcc-eeccCCCCCCCCCCCCCCCCCceeeccCCcccCcC
Q 038987 266 MWECKAC-TFLNHGCGSVPHQGDASANDRVWTCKFWTLENCVK 307 (316)
Q Consensus 266 ~W~C~~C-TllN~~C~~C~rPr~~~~~~~~WsC~~CT~~N~~~ 307 (316)
.=.|..| +|+|+-|.. . .....|.|.+|...|...
T Consensus 228 pvRC~rCrAYiNPf~~~-~------~~g~~W~CnfC~~~N~~P 263 (926)
T 1m2v_B 228 IVRCRRCRSYMNPFVTF-I------EQGRRWRCNFCRLANDVP 263 (926)
T ss_dssp CCBCSSSCCBCCTTCEE-E------TTTTEEECTTTCCEEECC
T ss_pred CCccCCccCEecCceEE-e------CCCCEEEccCCCCCCCCc
Confidence 4457666 567776655 1 134579999999999754
No 80
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=52.72 E-value=6.2 Score=42.45 Aligned_cols=19 Identities=26% Similarity=0.174 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHhhhcCCCC
Q 038987 46 FHEVLDTMLHELCHNDIAP 64 (316)
Q Consensus 46 ~~~I~~vllHELaH~~~~~ 64 (316)
...|..||+|||||.++||
T Consensus 361 k~~~~~vIaHElAHqWFGn 379 (967)
T 3se6_A 361 KLWVTRVIAHELAHQWFGN 379 (967)
T ss_dssp HHHHHHHHHHHHGGGTBTT
T ss_pred hHhHHHHHHHHHHHHHhcC
Confidence 4568899999999999997
No 81
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=52.65 E-value=5.2 Score=40.25 Aligned_cols=22 Identities=23% Similarity=0.098 Sum_probs=19.3
Q ss_pred HHHHHHHHHhhhcCCCCCChhH
Q 038987 48 EVLDTMLHELCHNDIAPHDAKF 69 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~H~~~F 69 (316)
.+-.||+|||.|+.-++||..-
T Consensus 133 ~~A~t~AHELGHnLGm~HD~~~ 154 (510)
T 3g5c_A 133 LMAVTLAQSLAHNIGIISDKRK 154 (510)
T ss_dssp HHHHHHHHHHHHHHTCCCCHHH
T ss_pred hhhHHHHHHHHHHcCCccCCCC
Confidence 4678999999999999999753
No 82
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=52.16 E-value=5.8 Score=37.82 Aligned_cols=25 Identities=24% Similarity=0.351 Sum_probs=21.0
Q ss_pred CCCCChHHHHHHHHHHhhhcCCCCC
Q 038987 41 RESLPFHEVLDTMLHELCHNDIAPH 65 (316)
Q Consensus 41 ~~flP~~~I~~vllHELaH~~~~~H 65 (316)
..|.|+..-+.|+.|||+|=+...+
T Consensus 128 ~~f~~~~~slDVv~HE~tHgvt~~~ 152 (316)
T 3dnz_A 128 QTFIPLSGGIDVVAHELTHAVTDYT 152 (316)
T ss_dssp SSBSCGGGCHHHHHHHHHHHHHHHT
T ss_pred cccccccccccceeeeecccccccc
Confidence 4689998889999999999876655
No 83
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=50.82 E-value=9.7 Score=28.85 Aligned_cols=17 Identities=18% Similarity=0.448 Sum_probs=11.2
Q ss_pred CCccccCcceeccCCCCCCCCC
Q 038987 264 PAMWECKACTFLNHGCGSVPHQ 285 (316)
Q Consensus 264 ~~~W~C~~CTllN~~C~~C~rP 285 (316)
...|.|+.| . |.+|.+.
T Consensus 19 ~~~W~C~~C-~----C~vC~~~ 35 (77)
T 3shb_A 19 DVNRLCRVC-A----CHLCGGR 35 (77)
T ss_dssp CTTSCCTTT-S----BTTTCCC
T ss_pred CCCCCCCCC-c----CCccCCC
Confidence 367999999 3 5555443
No 84
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=49.66 E-value=6.1 Score=41.45 Aligned_cols=35 Identities=23% Similarity=0.556 Sum_probs=25.4
Q ss_pred ccccCc--c-eeccCCCCCCCCCCCCCCCCCceeeccCCcccCcC
Q 038987 266 MWECKA--C-TFLNHGCGSVPHQGDASANDRVWTCKFWTLENCVK 307 (316)
Q Consensus 266 ~W~C~~--C-TllN~~C~~C~rPr~~~~~~~~WsC~~CT~~N~~~ 307 (316)
.=.|.. | +|+|+-|.. . .....|.|.+|...|...
T Consensus 53 pvRC~~~~CrayiNPf~~~-~------~~~~~W~C~~C~~~N~~P 90 (768)
T 1m2o_A 53 PVVCSGPHCKSILNPYCVI-D------PRNSSWSCPICNSRNHLP 90 (768)
T ss_dssp CCBCCSTTTCCBCCTTSCE-E------TTTTEECCTTTCCCCBCC
T ss_pred CCccCCCCCCeEECCceEE-e------CCCCEEEcccCCCCCCCC
Confidence 346776 7 588888876 2 134589999999999865
No 85
>2cr8_A MDM4 protein; ZF-ranbp domain, P53-binding protein MDM4, MDM2-like P53-binding DE protein, MDMX protein, double minute 4 protein; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=49.37 E-value=10 Score=27.22 Aligned_cols=25 Identities=20% Similarity=0.324 Sum_probs=22.2
Q ss_pred CCCceeeccCCcccCcCccccccCC
Q 038987 291 NDRVWTCKFWTLENCVKLDKCSRVS 315 (316)
Q Consensus 291 ~~~~WsC~~CT~~N~~~~~~C~~C~ 315 (316)
....|.|.-|--.|++...-|..|=
T Consensus 8 ~eD~WkC~~C~k~N~Pl~ryC~rCw 32 (53)
T 2cr8_A 8 SEDEWQCTECKKFNSPSKRYCFRCW 32 (53)
T ss_dssp CSCCEECSSSCCEECSSCCBCTTTC
T ss_pred CcceeecccccccCCCccchhHHHH
Confidence 4568999999999999999999883
No 86
>3khi_A Putative metal-dependent hydrolase; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; 1.95A {Klebsiella pneumoniae subsp} PDB: 3dl1_A
Probab=49.06 E-value=9.6 Score=35.48 Aligned_cols=61 Identities=11% Similarity=0.160 Sum_probs=30.0
Q ss_pred cccccCCccEEEEeeecCCCCCCCCChHHHHHHHHHHhhhcCCCCCCh-----------hHHHHHHHHHHHHHHHHh
Q 038987 20 LGSNLGAGVHIKLLLRKLNRDRESLPFHEVLDTMLHELCHNDIAPHDA-----------KFYKLWEELREECDELRS 85 (316)
Q Consensus 20 LGlN~N~G~~I~LRLR~~~~~~~flP~~~I~~vllHELaH~~~~~H~~-----------~Fy~ll~~l~~e~~~l~~ 85 (316)
+|--..+| .|-|.+...... |.. .=..|++||+||-..+-.+. ....-..-+..+|+.|..
T Consensus 120 ~GEaw~~G-pVILSW~dv~~g--~~~--dg~NvvIHEFAHkLD~~~G~~adG~PpL~~~~~~~W~~~~~~a~~~l~~ 191 (267)
T 3khi_A 120 SGQSWQQG-PVVLNWLDIQDS--FDA--SGFNLVVHEVAHKLDTRNGDRASGVPLIPLREVAGWEHDLHAAMNNIQD 191 (267)
T ss_dssp -----CCS-CEEEEHHHHHHH--TSS--SSCCHHHHHHHHHHHTTTSCCCCSCCSCCGGGHHHHHHHHHHHHHHHHH
T ss_pred cccccCCC-eEEEEHHHHhhh--ccc--CCCchHHhHHHHHHHHhcCCccCCCCCCcccchHHHHHHHHHHHHHHHH
Confidence 34333344 677777532111 100 11379999999976654444 233333345566666654
No 87
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=48.50 E-value=10 Score=27.43 Aligned_cols=42 Identities=17% Similarity=0.286 Sum_probs=27.8
Q ss_pred CccccCcceeccCC--CCCCCC--------CCCCCCCCCceeeccCCcccCc
Q 038987 265 AMWECKACTFLNHG--CGSVPH--------QGDASANDRVWTCKFWTLENCV 306 (316)
Q Consensus 265 ~~W~C~~CTllN~~--C~~C~r--------Pr~~~~~~~~WsC~~CT~~N~~ 306 (316)
..+.|..|.--... |..|.+ |.+...+...|.|+.|...+..
T Consensus 7 ~~~~C~vC~~~g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~~ 58 (66)
T 1xwh_A 7 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQ 58 (66)
T ss_dssp CCCSBSSSSCCSSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCCC
T ss_pred CCCCCccCCCCCCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCcccc
Confidence 56889999865555 777643 3333334568999999865543
No 88
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=48.05 E-value=7.6 Score=31.56 Aligned_cols=17 Identities=35% Similarity=0.466 Sum_probs=13.7
Q ss_pred hHHHHHHHHHHhhhcCC
Q 038987 46 FHEVLDTMLHELCHNDI 62 (316)
Q Consensus 46 ~~~I~~vllHELaH~~~ 62 (316)
.+.|..|++||++|..-
T Consensus 87 ~~~V~~vvvhEiahh~G 103 (114)
T 3e11_A 87 IDEVRKTVVHEIAHHFG 103 (114)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 45677999999999753
No 89
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=46.15 E-value=14 Score=29.25 Aligned_cols=18 Identities=33% Similarity=0.896 Sum_probs=12.7
Q ss_pred CCccccCcceeccCCCCCCCCC
Q 038987 264 PAMWECKACTFLNHGCGSVPHQ 285 (316)
Q Consensus 264 ~~~W~C~~CTllN~~C~~C~rP 285 (316)
...|.|+.|.+ |.+|.++
T Consensus 53 ~~~W~C~~C~~----C~vC~~~ 70 (112)
T 3v43_A 53 ALRWQCIECKT----CSSCRDQ 70 (112)
T ss_dssp TSCCCCTTTCC----BTTTCCC
T ss_pred ccccccccCCc----cccccCc
Confidence 35799999975 6666543
No 90
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A
Probab=46.00 E-value=6.2 Score=37.11 Aligned_cols=41 Identities=17% Similarity=0.011 Sum_probs=29.4
Q ss_pred ccccccCCccEEEEeeecCCCCCCCCChHHHHHHHHHHhhhcCCCCCCh
Q 038987 19 ALGSNLGAGVHIKLLLRKLNRDRESLPFHEVLDTMLHELCHNDIAPHDA 67 (316)
Q Consensus 19 lLGlN~N~G~~I~LRLR~~~~~~~flP~~~I~~vllHELaH~~~~~H~~ 67 (316)
..|+-.+....|.|+-+. +.....-||+|||+|++.+.+..
T Consensus 74 ~~G~~~~~~~~I~LN~~~--------~~~rqrFTLAHELGHllLh~~~~ 114 (301)
T 3dte_A 74 RDGAYDPEHHVILINSQV--------RPERQRFTLAHEISHALLLGDDD 114 (301)
T ss_dssp CCEEEETTTTEEEEETTS--------CHHHHHHHHHHHHHHHHHHHCHH
T ss_pred CCEEEECCCcEEEEcCCC--------ChhhHHHHHHHHHHHHHhccccc
Confidence 445544556678877653 56788999999999998765543
No 91
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=45.99 E-value=6.4 Score=41.30 Aligned_cols=35 Identities=26% Similarity=0.553 Sum_probs=23.7
Q ss_pred ccccCcc-eeccCCCCCCCCCCCCCCCCCceeeccCCcccCcCc
Q 038987 266 MWECKAC-TFLNHGCGSVPHQGDASANDRVWTCKFWTLENCVKL 308 (316)
Q Consensus 266 ~W~C~~C-TllN~~C~~C~rPr~~~~~~~~WsC~~CT~~N~~~~ 308 (316)
.=.|..| +|+||-|.. . ....|.|.+|...|....
T Consensus 85 p~RC~rCrayiNPf~~f-~-------~~~~w~Cn~C~~~N~~P~ 120 (751)
T 3eh1_A 85 IVRCRSCRTYINPFVSF-I-------DQRRWKCNLCYRVNDVPE 120 (751)
T ss_dssp CCBCTTTCCBCCTTCEE-S-------SSSEEECTTTCCEEECCG
T ss_pred CCcccCccCEeCCceEE-e-------cCCEEEcccccCCCCCCH
Confidence 3556666 466666654 2 235799999999997643
No 92
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=45.91 E-value=13 Score=26.35 Aligned_cols=40 Identities=13% Similarity=0.231 Sum_probs=26.4
Q ss_pred CccccCcceeccCC--CCCCCC--------CCCCCCCCCceeeccCCccc
Q 038987 265 AMWECKACTFLNHG--CGSVPH--------QGDASANDRVWTCKFWTLEN 304 (316)
Q Consensus 265 ~~W~C~~CTllN~~--C~~C~r--------Pr~~~~~~~~WsC~~CT~~N 304 (316)
..+.|..|.--+.. |..|.+ |.+...+...|.|+.|....
T Consensus 4 ~~~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 53 (60)
T 2puy_A 4 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQM 53 (60)
T ss_dssp CCSSCTTTCCCSSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHH
T ss_pred CCCCCcCCCCCCcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccChh
Confidence 45778888876655 777643 33333345689999997544
No 93
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=45.27 E-value=6.4 Score=41.31 Aligned_cols=35 Identities=26% Similarity=0.569 Sum_probs=25.0
Q ss_pred ccccCc--c-eeccCCCCCCCCCCCCCCCCCceeeccCCcccCcC
Q 038987 266 MWECKA--C-TFLNHGCGSVPHQGDASANDRVWTCKFWTLENCVK 307 (316)
Q Consensus 266 ~W~C~~--C-TllN~~C~~C~rPr~~~~~~~~WsC~~CT~~N~~~ 307 (316)
.=.|.. | +|+|+-|.. . .....|.|.+|...|...
T Consensus 62 pvRC~~~~CrayiNPf~~~-~------~~~~~W~C~~C~~~N~~P 99 (769)
T 2nut_A 62 PVLCSRTTCRAVLNPLCQV-D------YRAKLWACNFCYQRNQFP 99 (769)
T ss_dssp CCBCSSTTCCCBCCTTSEE-E------TTTTEEECSSSCCEEECC
T ss_pred CCcCCCCCCCeEECCceEE-e------CCCCEEEccCCCCCCCCC
Confidence 456766 7 578887766 2 134589999999999754
No 94
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=45.17 E-value=7.5 Score=39.52 Aligned_cols=17 Identities=29% Similarity=0.401 Sum_probs=15.0
Q ss_pred HHHHHHHHHhhhcCCCC
Q 038987 48 EVLDTMLHELCHNDIAP 64 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~ 64 (316)
.+..||+|||||.++||
T Consensus 294 ~~~~viaHElAHqWfGn 310 (632)
T 2xq0_A 294 SNIDVIAHELAHSWSGN 310 (632)
T ss_dssp CSTHHHHHHHHHTTBTT
T ss_pred hHHHHHHHHHHHHHhcC
Confidence 35789999999999996
No 95
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=44.89 E-value=7.7 Score=39.14 Aligned_cols=17 Identities=24% Similarity=0.386 Sum_probs=15.2
Q ss_pred HHHHHHHHHhhhcCCCC
Q 038987 48 EVLDTMLHELCHNDIAP 64 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~ 64 (316)
.+..||+|||||.+.||
T Consensus 293 ~~~~viaHElaHqWfGn 309 (605)
T 3cia_A 293 SLVNLIAHELAHSWSGN 309 (605)
T ss_dssp CSTHHHHHHHHHTTBTT
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 46789999999999997
No 96
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=44.62 E-value=8.3 Score=30.81 Aligned_cols=12 Identities=17% Similarity=0.620 Sum_probs=8.5
Q ss_pred CCCceeeccCCc
Q 038987 291 NDRVWTCKFWTL 302 (316)
Q Consensus 291 ~~~~WsC~~CT~ 302 (316)
+...|.|+.|..
T Consensus 96 P~g~W~C~~C~~ 107 (114)
T 2kwj_A 96 PEGSWSCHLCWE 107 (114)
T ss_dssp CSSCCCCHHHHH
T ss_pred CCCCeECccccc
Confidence 445799998853
No 97
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=44.34 E-value=4.9 Score=42.28 Aligned_cols=32 Identities=22% Similarity=0.431 Sum_probs=0.0
Q ss_pred cCcc-eeccCCCCCCCCCCCCCCCCCceeeccCCcccCcC
Q 038987 269 CKAC-TFLNHGCGSVPHQGDASANDRVWTCKFWTLENCVK 307 (316)
Q Consensus 269 C~~C-TllN~~C~~C~rPr~~~~~~~~WsC~~CT~~N~~~ 307 (316)
|..| +|+||-|.. ......|.|.+|...|...
T Consensus 101 C~rCrayiNPf~~f-------~~~g~~w~Cn~C~~~N~~P 133 (770)
T 3efo_B 101 CNRCKAYMCPFMQF-------IEGGRRYQCGFCNCVNDVP 133 (770)
T ss_dssp CTTTCCBSCTTCEE-------EGGGTEEECTTTCCEEECC
T ss_pred cCCCCCCcCCceEE-------ecCCCEEEeccccccCCCc
No 98
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=43.88 E-value=5 Score=42.16 Aligned_cols=32 Identities=22% Similarity=0.410 Sum_probs=0.0
Q ss_pred cCcc-eeccCCCCCCCCCCCCCCCCCceeeccCCcccCcC
Q 038987 269 CKAC-TFLNHGCGSVPHQGDASANDRVWTCKFWTLENCVK 307 (316)
Q Consensus 269 C~~C-TllN~~C~~C~rPr~~~~~~~~WsC~~CT~~N~~~ 307 (316)
|..| +|+||-|.. ......|.|.+|...|...
T Consensus 97 C~rCrayiNPf~~f-------~~~g~~w~Cn~C~~~N~~P 129 (766)
T 3eh2_A 97 CNRCKAYMCPFMQF-------IEGGRRFQCCFCSCINDVP 129 (766)
T ss_dssp CTTTCCBCCTTCEE-------EGGGTEEECTTTCCEEECC
T ss_pred cCCCCCEeCCceEE-------ecCCCEEEeccccccCCCC
No 99
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=43.77 E-value=18 Score=26.53 Aligned_cols=37 Identities=14% Similarity=0.215 Sum_probs=23.9
Q ss_pred cccCcceeccCC--CCCCCC--------CCCCCCCCCceeeccCCcc
Q 038987 267 WECKACTFLNHG--CGSVPH--------QGDASANDRVWTCKFWTLE 303 (316)
Q Consensus 267 W~C~~CTllN~~--C~~C~r--------Pr~~~~~~~~WsC~~CT~~ 303 (316)
-.|..|---... |..|.+ |.+.......|.|+.|+-.
T Consensus 13 ~~C~vC~~~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~ 59 (66)
T 2lri_C 13 ARCGVCGDGTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGD 59 (66)
T ss_dssp CCCTTTSCCTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTC
T ss_pred CCcCCCCCCCeEEECCCCCCceecccCCCccCcCCCCCEECccccCC
Confidence 458888643333 888754 3344445567999999854
No 100
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=43.53 E-value=18 Score=28.00 Aligned_cols=42 Identities=14% Similarity=0.317 Sum_probs=26.1
Q ss_pred CCCCccccCcceeccC---C--CCCCC--------CCCCCCCCCCceeeccCCcc
Q 038987 262 EEPAMWECKACTFLNH---G--CGSVP--------HQGDASANDRVWTCKFWTLE 303 (316)
Q Consensus 262 ~~~~~W~C~~CTllN~---~--C~~C~--------rPr~~~~~~~~WsC~~CT~~ 303 (316)
.....+.|..|---.. . |..|. .|.+...+...|.|+.|...
T Consensus 12 ~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 12 QFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred hccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 3444567888876543 2 66653 34444445568999999764
No 101
>2c6a_A Ubiquitin-protein ligase E3 MDM2; zinc finger, human MDM2, phosphorylation, alternative splicing, metal-binding, nuclear protein, proto- oncogene; NMR {Homo sapiens} SCOP: g.41.11.1 PDB: 2c6b_A
Probab=40.93 E-value=12 Score=26.26 Aligned_cols=23 Identities=22% Similarity=0.375 Sum_probs=21.0
Q ss_pred CceeeccCCcccCcCccccccCC
Q 038987 293 RVWTCKFWTLENCVKLDKCSRVS 315 (316)
Q Consensus 293 ~~WsC~~CT~~N~~~~~~C~~C~ 315 (316)
..|.|..|--+|++.-..|..|=
T Consensus 12 D~WkC~~C~~~N~Pl~r~C~rCw 34 (46)
T 2c6a_A 12 DYWKCTSCNEMNPPLPSHCNRCW 34 (46)
T ss_dssp GCEECTTTCCEECSSCSSCTTTC
T ss_pred ceEecccccccCCCccchhhHHH
Confidence 47999999999999999999884
No 102
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=40.32 E-value=13 Score=37.92 Aligned_cols=19 Identities=21% Similarity=0.237 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHhhhcCCCC
Q 038987 46 FHEVLDTMLHELCHNDIAP 64 (316)
Q Consensus 46 ~~~I~~vllHELaH~~~~~ 64 (316)
+..++.++.||++|.+.++
T Consensus 264 ~~~~~~liaHE~~H~W~g~ 282 (597)
T 4fgm_A 264 YQTFLSLCCHEYFHSWNIK 282 (597)
T ss_dssp HHHHHHHHHHHHHHTTBTT
T ss_pred hhchhhhHhhhhheeeccc
Confidence 5678999999999999984
No 103
>2rpq_B Activating transcription factor 7-interacting protein 1; SUMO, SIM, nucleus, UBL conjugation, UBL conjugation pathway, activator; NMR {Homo sapiens}
Probab=40.28 E-value=6.9 Score=27.56 Aligned_cols=15 Identities=27% Similarity=0.322 Sum_probs=12.3
Q ss_pred CCCcccccCCCCCCC
Q 038987 210 ESNSVDLEAGTSTSE 224 (316)
Q Consensus 210 ~~~~~dl~~~~~~~~ 224 (316)
...|||||.|+.++.
T Consensus 31 sgGVIDLTlDdEe~g 45 (49)
T 2rpq_B 31 SSGVIDLTMDDEESG 45 (49)
T ss_pred CCceEEeeecchhcc
Confidence 458999999998763
No 104
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=37.73 E-value=11 Score=36.29 Aligned_cols=24 Identities=21% Similarity=0.191 Sum_probs=18.5
Q ss_pred CCCChHHHHHHHHHHhhhcCCCCC
Q 038987 42 ESLPFHEVLDTMLHELCHNDIAPH 65 (316)
Q Consensus 42 ~flP~~~I~~vllHELaH~~~~~H 65 (316)
.|.++..-..|+.|||+|=+.-..
T Consensus 149 ~f~~~~~~lDVv~HEltHGVt~~~ 172 (341)
T 2vqx_A 149 IFNRFTIAIDVVGHALAHGVTESE 172 (341)
T ss_dssp SBCCTTSCHHHHHHHHHHHHHHHT
T ss_pred ccCCcccchhhhhhhcccceeccc
Confidence 466776667999999999776544
No 105
>2x7m_A Archaemetzincin; metalloprotease, protease, hydrolase, metal-bindi; 1.50A {Methanopyrus kandleri}
Probab=37.72 E-value=16 Score=32.28 Aligned_cols=19 Identities=32% Similarity=0.356 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhhhcCCCCC
Q 038987 47 HEVLDTMLHELCHNDIAPH 65 (316)
Q Consensus 47 ~~I~~vllHELaH~~~~~H 65 (316)
..+..|++|||.|+.-..|
T Consensus 137 ~r~~~~~~HElGH~lGl~H 155 (195)
T 2x7m_A 137 ERVVKELTHELGHTFGLGH 155 (195)
T ss_dssp HHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHhhcCCCC
Confidence 3466899999999999999
No 106
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=37.57 E-value=9 Score=27.37 Aligned_cols=43 Identities=21% Similarity=0.393 Sum_probs=26.4
Q ss_pred CccccCcceec-----cCC--CCCCCC--------CCCCC---CCCCceeeccCCcccCcC
Q 038987 265 AMWECKACTFL-----NHG--CGSVPH--------QGDAS---ANDRVWTCKFWTLENCVK 307 (316)
Q Consensus 265 ~~W~C~~CTll-----N~~--C~~C~r--------Pr~~~---~~~~~WsC~~CT~~N~~~ 307 (316)
....|..|--- |.. |..|.+ |.... .....|.|+.|...+..+
T Consensus 5 ~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~~k 65 (66)
T 2yt5_A 5 SSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATTTK 65 (66)
T ss_dssp CCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTSCC
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCccccC
Confidence 45678888765 333 666643 33322 134579999998876653
No 107
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=37.15 E-value=21 Score=27.66 Aligned_cols=38 Identities=16% Similarity=0.282 Sum_probs=23.6
Q ss_pred CCccccCcceeccCC------CCCCCCCCCCCCCCCceeeccCCc
Q 038987 264 PAMWECKACTFLNHG------CGSVPHQGDASANDRVWTCKFWTL 302 (316)
Q Consensus 264 ~~~W~C~~CTllN~~------C~~C~rPr~~~~~~~~WsC~~CT~ 302 (316)
...|.|..|-++=.+ .++...-.- ......|.|+.|..
T Consensus 25 m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~f-edlPddW~CPvCga 68 (81)
T 2kn9_A 25 YKLFRCIQCGFEYDEALGWPEDGIAAGTRW-DDIPDDWSCPDCGA 68 (81)
T ss_dssp CCEEEETTTCCEEETTTCBTTTTBCTTCCT-TTSCTTCCCTTTCC
T ss_pred cceEEeCCCCEEEcCCcCCcccCcCCCCCh-hHCCCCCcCCCCCC
Confidence 468999999988665 444221110 11234699999975
No 108
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=36.00 E-value=6.5 Score=30.48 Aligned_cols=31 Identities=10% Similarity=0.288 Sum_probs=19.1
Q ss_pred CCCCCCCCCCCCCCCceeeccCCcccCcCcc
Q 038987 279 CGSVPHQGDASANDRVWTCKFWTLENCVKLD 309 (316)
Q Consensus 279 C~~C~rPr~~~~~~~~WsC~~CT~~N~~~~~ 309 (316)
|..|..+..-.+....|.|++|.+.-.+-.+
T Consensus 30 Cp~CG~~~v~r~atGiW~C~~Cg~~~aggay 60 (83)
T 1vq8_Z 30 CPNCGEDRVDRQGTGIWQCSYCDYKFTGGSY 60 (83)
T ss_dssp CSSSCCEEEEEEETTEEEETTTCCEEECCSS
T ss_pred CCCCCCcceeccCCCeEECCCCCCEecCCEe
Confidence 6666543222223457999999987665544
No 109
>3lmc_A Peptidase, zinc-dependent; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, MUR16; 2.00A {Methanocorpusculum labreanum}
Probab=35.58 E-value=18 Score=32.64 Aligned_cols=22 Identities=18% Similarity=0.101 Sum_probs=19.3
Q ss_pred hHHHHHHHHHHhhhcCCCCCCh
Q 038987 46 FHEVLDTMLHELCHNDIAPHDA 67 (316)
Q Consensus 46 ~~~I~~vllHELaH~~~~~H~~ 67 (316)
.+.|..+++|||.|+.-.+|-.
T Consensus 140 ~~Rv~k~~~HElGH~lGL~HC~ 161 (210)
T 3lmc_A 140 IDRIVKEGAHEIGHLFGLGHCD 161 (210)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCS
T ss_pred HHHHHHHHHHHHHHhcCCCCCC
Confidence 6678899999999999999944
No 110
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=35.53 E-value=36 Score=24.95 Aligned_cols=9 Identities=22% Similarity=0.490 Sum_probs=7.5
Q ss_pred ceeeccCCc
Q 038987 294 VWTCKFWTL 302 (316)
Q Consensus 294 ~WsC~~CT~ 302 (316)
.|.|+.|.-
T Consensus 60 ~W~C~~C~~ 68 (70)
T 3asl_A 60 EWYCPECRN 68 (70)
T ss_dssp CCCCTTTSC
T ss_pred CcCCcCccC
Confidence 799999963
No 111
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=35.37 E-value=16 Score=25.92 Aligned_cols=22 Identities=18% Similarity=0.291 Sum_probs=14.4
Q ss_pred ceeeccCCcccCcCccccccCC
Q 038987 294 VWTCKFWTLENCVKLDKCSRVS 315 (316)
Q Consensus 294 ~WsC~~CT~~N~~~~~~C~~C~ 315 (316)
...|..|...|+...|.|.-||
T Consensus 14 k~iCpkC~a~~~~gaw~CrKCG 35 (51)
T 3j21_g 14 KYVCLRCGATNPWGAKKCRKCG 35 (51)
T ss_dssp EEECTTTCCEECTTCSSCSSSS
T ss_pred CccCCCCCCcCCCCceecCCCC
Confidence 4566666666666666666665
No 112
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=34.92 E-value=22 Score=25.40 Aligned_cols=14 Identities=14% Similarity=0.705 Sum_probs=9.9
Q ss_pred CccccCcceeccCC
Q 038987 265 AMWECKACTFLNHG 278 (316)
Q Consensus 265 ~~W~C~~CTllN~~ 278 (316)
..|.|..|-++=.+
T Consensus 2 ~~y~C~vCGyvYd~ 15 (54)
T 4rxn_A 2 KKYTCTVCGYIYDP 15 (54)
T ss_dssp CCEEETTTCCEECT
T ss_pred CceECCCCCeEECC
Confidence 46888888776554
No 113
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=33.90 E-value=24 Score=24.85 Aligned_cols=37 Identities=16% Similarity=0.411 Sum_probs=21.7
Q ss_pred CccccCcceeccCC------CCCCCCCCCCCCCCCceeeccCCc
Q 038987 265 AMWECKACTFLNHG------CGSVPHQGDASANDRVWTCKFWTL 302 (316)
Q Consensus 265 ~~W~C~~CTllN~~------C~~C~rPr~~~~~~~~WsC~~CT~ 302 (316)
..|.|..|-++=.+ .++...-.- ......|.|+.|..
T Consensus 2 ~~y~C~~CGyvYd~~~Gdp~~gi~pGt~f-~~lP~dw~CP~Cg~ 44 (52)
T 1e8j_A 2 DIYVCTVCGYEYDPAKGDPDSGIKPGTKF-EDLPDDWACPVCGA 44 (52)
T ss_dssp CCEECSSSCCCCCTTTCCTTTTCCSSCCT-TSSCTTCCCSSSCC
T ss_pred CcEEeCCCCeEEcCCcCCcccCcCCCCch-HHCCCCCcCCCCCC
Confidence 46999999887654 333111000 01234699999975
No 114
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=33.08 E-value=24 Score=24.44 Aligned_cols=12 Identities=17% Similarity=0.675 Sum_probs=6.6
Q ss_pred CccccCcceecc
Q 038987 265 AMWECKACTFLN 276 (316)
Q Consensus 265 ~~W~C~~CTllN 276 (316)
..|.|..|-++=
T Consensus 3 ~~y~C~vCGyvy 14 (46)
T 6rxn_A 3 QKYVCNVCGYEY 14 (46)
T ss_dssp CCEEETTTCCEE
T ss_pred CEEECCCCCeEE
Confidence 346666665543
No 115
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=32.70 E-value=19 Score=30.86 Aligned_cols=14 Identities=14% Similarity=0.555 Sum_probs=10.1
Q ss_pred CCCccccCcceecc
Q 038987 263 EPAMWECKACTFLN 276 (316)
Q Consensus 263 ~~~~W~C~~CTllN 276 (316)
....|.|+.|-++=
T Consensus 135 ~~~~~~C~~CG~i~ 148 (170)
T 3pwf_A 135 IKKVYICPICGYTA 148 (170)
T ss_dssp CSCEEECTTTCCEE
T ss_pred CCCeeEeCCCCCee
Confidence 34688888887753
No 116
>2g45_A Ubiquitin carboxyl-terminal hydrolase 5; zinc finger, hydrolase; 1.99A {Homo sapiens} SCOP: g.44.1.5 PDB: 2g43_A 2l80_A
Probab=32.25 E-value=26 Score=29.06 Aligned_cols=22 Identities=14% Similarity=0.129 Sum_probs=14.1
Q ss_pred CceeeccCCcccCcCccccccCCC
Q 038987 293 RVWTCKFWTLENCVKLDKCSRVSK 316 (316)
Q Consensus 293 ~~WsC~~CT~~N~~~~~~C~~C~~ 316 (316)
..|.|..|-.. ..+|.|-.||.
T Consensus 33 ~~~~C~~C~~~--~~LwlCL~CG~ 54 (129)
T 2g45_A 33 CGWKCSKCDMR--ENLWLNLTDGS 54 (129)
T ss_dssp CBCCCSSSSCC--SSEEEETTTCC
T ss_pred CCCcCccccCc--CceEEeccCCc
Confidence 35777777654 35777777763
No 117
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=31.59 E-value=14 Score=34.87 Aligned_cols=25 Identities=24% Similarity=0.304 Sum_probs=18.9
Q ss_pred CCCCChHHHHHHHHHHhhhcCCCCCC
Q 038987 41 RESLPFHEVLDTMLHELCHNDIAPHD 66 (316)
Q Consensus 41 ~~flP~~~I~~vllHELaH~~~~~H~ 66 (316)
..|+|+. -..|++|||+|=+.-...
T Consensus 127 ~~~~p~~-~lDVv~HE~tHGVt~~~a 151 (301)
T 1u4g_A 127 TMFYPLV-SLDVAAHEVSHGFTEQNS 151 (301)
T ss_dssp SSBSCSC-CHHHHHHHHHHHHHHTTT
T ss_pred ccccccc-ccceeeeccccceecccc
Confidence 3577874 578999999998766553
No 118
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=31.37 E-value=28 Score=23.49 Aligned_cols=13 Identities=23% Similarity=0.590 Sum_probs=9.3
Q ss_pred CCCCCceeeccCC
Q 038987 289 SANDRVWTCKFWT 301 (316)
Q Consensus 289 ~~~~~~WsC~~CT 301 (316)
..+...|.|+.|.
T Consensus 36 ~~P~g~W~C~~C~ 48 (51)
T 1f62_A 36 EVPDGEWQCPACQ 48 (51)
T ss_dssp SCCSSCCSCTTTS
T ss_pred CCCCCcEECcCcc
Confidence 3344579999996
No 119
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=30.82 E-value=27 Score=26.14 Aligned_cols=38 Identities=18% Similarity=0.386 Sum_probs=22.5
Q ss_pred CCccccCcceeccCC------CCCCCCCCCCCCCCCceeeccCCc
Q 038987 264 PAMWECKACTFLNHG------CGSVPHQGDASANDRVWTCKFWTL 302 (316)
Q Consensus 264 ~~~W~C~~CTllN~~------C~~C~rPr~~~~~~~~WsC~~CT~ 302 (316)
...|.|..|-++=.+ .++...-.- ......|.|+.|..
T Consensus 5 m~~y~C~vCGyiYd~~~Gdp~~gi~pGT~f-~~lPddw~CP~Cga 48 (70)
T 1dx8_A 5 EGKYECEACGYIYEPEKGDKFAGIPPGTPF-VDLSDSFMCPACRS 48 (70)
T ss_dssp SSCEEETTTCCEECTTTCCTTTTCCSSCCG-GGSCTTCBCTTTCC
T ss_pred CceEEeCCCCEEEcCCCCCcccCcCCCCch-hhCCCCCcCCCCCC
Confidence 457999999988665 344211100 01234699999975
No 120
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=30.80 E-value=15 Score=34.93 Aligned_cols=25 Identities=24% Similarity=0.327 Sum_probs=19.6
Q ss_pred CCCCChHHHHHHHHHHhhhcCCCCCC
Q 038987 41 RESLPFHEVLDTMLHELCHNDIAPHD 66 (316)
Q Consensus 41 ~~flP~~~I~~vllHELaH~~~~~H~ 66 (316)
..|+|+. -+.|+.|||+|=+...+.
T Consensus 128 ~~~~~~~-slDVv~HE~tHGvt~~~a 152 (306)
T 3nqx_A 128 NTFYPLV-SLDVSAHEVSHGFTEQNS 152 (306)
T ss_dssp SSBSCSC-CHHHHHHHHHHHHHHTTT
T ss_pred ccccccc-ccchhhhhhccccccCCC
Confidence 3578876 678999999998876653
No 121
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=30.49 E-value=21 Score=31.46 Aligned_cols=13 Identities=15% Similarity=0.713 Sum_probs=10.5
Q ss_pred CccccCcceeccC
Q 038987 265 AMWECKACTFLNH 277 (316)
Q Consensus 265 ~~W~C~~CTllN~ 277 (316)
..|.|..|-++=.
T Consensus 170 ~~~~C~~CG~i~~ 182 (202)
T 1yuz_A 170 KFHLCPICGYIHK 182 (202)
T ss_dssp CEEECSSSCCEEE
T ss_pred cEEEECCCCCEEc
Confidence 5799999988743
No 122
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=30.12 E-value=28 Score=24.52 Aligned_cols=35 Identities=20% Similarity=0.508 Sum_probs=19.5
Q ss_pred ccccCcceeccCC------CCCCCCCCCC-CCCCCceeeccCCc
Q 038987 266 MWECKACTFLNHG------CGSVPHQGDA-SANDRVWTCKFWTL 302 (316)
Q Consensus 266 ~W~C~~CTllN~~------C~~C~rPr~~-~~~~~~WsC~~CT~ 302 (316)
.|.|..|-++=.+ .++. |... ......|.|+.|..
T Consensus 2 ~~~C~~CGyvYd~~~Gdp~~gi~--pGt~f~~lP~dw~CP~Cg~ 43 (52)
T 1yk4_A 2 KLSCKICGYIYDEDEGDPDNGIS--PGTKFEDLPDDWVCPLCGA 43 (52)
T ss_dssp EEEESSSSCEEETTTCBGGGTBC--TTCCGGGSCTTCBCTTTCC
T ss_pred cEEeCCCCeEECCCcCCcccCcC--CCCCHhHCCCCCcCCCCCC
Confidence 5888888877544 3331 1111 01234588888864
No 123
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=29.84 E-value=15 Score=34.94 Aligned_cols=15 Identities=27% Similarity=0.472 Sum_probs=12.8
Q ss_pred HHHHHHHHHHhhhcC
Q 038987 47 HEVLDTMLHELCHND 61 (316)
Q Consensus 47 ~~I~~vllHELaH~~ 61 (316)
..-..||||||+|+.
T Consensus 285 ~s~a~tllHE~tH~~ 299 (343)
T 2x3c_A 285 DSRAGTIVHQLSHFN 299 (343)
T ss_dssp TCHHHHHHHHHHHST
T ss_pred CccchhHhhhhhccc
Confidence 457899999999985
No 124
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=29.51 E-value=24 Score=29.64 Aligned_cols=20 Identities=25% Similarity=0.250 Sum_probs=17.8
Q ss_pred HHHHHHHHHhhhcCCCCCCh
Q 038987 48 EVLDTMLHELCHNDIAPHDA 67 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~H~~ 67 (316)
.+..|++|||-|..--.|..
T Consensus 110 ~~~~v~~HEiGHaLGL~H~~ 129 (168)
T 1cge_A 110 NLHRVAAHELGHSLGLSHST 129 (168)
T ss_dssp BHHHHHHHHHHHHTTCCCCS
T ss_pred chhhhhhhHhHhhhcCCCCC
Confidence 47899999999999989985
No 125
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=29.33 E-value=21 Score=29.44 Aligned_cols=20 Identities=20% Similarity=0.265 Sum_probs=17.6
Q ss_pred HHHHHHHHHhhhcCCCCCCh
Q 038987 48 EVLDTMLHELCHNDIAPHDA 67 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~H~~ 67 (316)
.+..|++|||-|.+--.|..
T Consensus 107 ~~~~v~~HEiGHaLGL~H~~ 126 (160)
T 2jsd_A 107 NLFTVAAHEFGHALGLAHST 126 (160)
T ss_dssp EHHHHHHHHHHHHHTCCCCC
T ss_pred hhHHHHHHHhHhhhcCCCCC
Confidence 47899999999999888875
No 126
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=27.51 E-value=22 Score=31.22 Aligned_cols=23 Identities=13% Similarity=0.273 Sum_probs=14.3
Q ss_pred CceeeccCCcccCcC-ccccccCC
Q 038987 293 RVWTCKFWTLENCVK-LDKCSRVS 315 (316)
Q Consensus 293 ~~WsC~~CT~~N~~~-~~~C~~C~ 315 (316)
..|.|..|.|.=.+. -++|.+|+
T Consensus 170 ~~~~C~~CG~i~~g~~p~~CP~C~ 193 (202)
T 1yuz_A 170 KFHLCPICGYIHKGEDFEKCPICF 193 (202)
T ss_dssp CEEECSSSCCEEESSCCSBCTTTC
T ss_pred cEEEECCCCCEEcCcCCCCCCCCC
Confidence 367777777653222 26777776
No 127
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=26.91 E-value=41 Score=30.55 Aligned_cols=8 Identities=25% Similarity=0.675 Sum_probs=6.9
Q ss_pred ceeeccCC
Q 038987 294 VWTCKFWT 301 (316)
Q Consensus 294 ~WsC~~CT 301 (316)
.|.|+.|.
T Consensus 216 ~W~Cp~C~ 223 (226)
T 3ask_A 216 EWYCPECR 223 (226)
T ss_dssp CCCCGGGC
T ss_pred CCCCcCCc
Confidence 69999995
No 128
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=26.42 E-value=29 Score=28.87 Aligned_cols=21 Identities=14% Similarity=0.113 Sum_probs=18.4
Q ss_pred HHHHHHHHHhhhcCCCCCChh
Q 038987 48 EVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~H~~~ 68 (316)
.+..|++|||-|.+--.|+..
T Consensus 110 ~~~~va~HEiGHaLGL~Hs~~ 130 (159)
T 2ovx_A 110 SLFLVAAHQFGHALGLDHSSV 130 (159)
T ss_dssp EHHHHHHHHHHHHTTCCCCSC
T ss_pred chhhhhhhhhhhhhcCCCCCC
Confidence 478999999999998888864
No 129
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=24.11 E-value=43 Score=24.34 Aligned_cols=39 Identities=21% Similarity=0.555 Sum_probs=24.3
Q ss_pred CCccccCcceeccCC-----CCCCCCC--------CCCCCCCCceeeccCCc
Q 038987 264 PAMWECKACTFLNHG-----CGSVPHQ--------GDASANDRVWTCKFWTL 302 (316)
Q Consensus 264 ~~~W~C~~CTllN~~-----C~~C~rP--------r~~~~~~~~WsC~~CT~ 302 (316)
...+.|..|.-.... |..|.+- .........|.|+.|.-
T Consensus 16 ~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~ 67 (75)
T 2k16_A 16 NQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCAN 67 (75)
T ss_dssp CEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHH
T ss_pred CCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccC
Confidence 356889888765322 8888532 22222335799999974
No 130
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=24.05 E-value=34 Score=28.50 Aligned_cols=22 Identities=23% Similarity=0.258 Sum_probs=18.8
Q ss_pred HHHHHHHHHHhhhcCCCCCChh
Q 038987 47 HEVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 47 ~~I~~vllHELaH~~~~~H~~~ 68 (316)
..+..|++|||-|..--.|...
T Consensus 111 ~~~~~v~~HEiGHaLGL~H~~~ 132 (165)
T 1hv5_A 111 TDLLQVAAHEFGHVLGLQHTTA 132 (165)
T ss_dssp EEHHHHHHHHHHHHTTCCCCSC
T ss_pred chhhhhHHHHhHhhhCCCCCCC
Confidence 3578999999999998888864
No 131
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.93 E-value=73 Score=23.82 Aligned_cols=8 Identities=25% Similarity=0.766 Sum_probs=6.9
Q ss_pred ceeeccCC
Q 038987 294 VWTCKFWT 301 (316)
Q Consensus 294 ~WsC~~CT 301 (316)
.|.|+.|.
T Consensus 68 ~W~C~~C~ 75 (77)
T 2e6s_A 68 YWYCPSCK 75 (77)
T ss_dssp CCCCTTTC
T ss_pred CcCCcCcc
Confidence 79999986
No 132
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=23.72 E-value=27 Score=29.09 Aligned_cols=21 Identities=19% Similarity=0.216 Sum_probs=18.2
Q ss_pred HHHHHHHHHhhhcCCCCCChh
Q 038987 48 EVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~H~~~ 68 (316)
.+..|++|||-|..--.|+..
T Consensus 114 ~~~~v~~HEiGHaLGL~H~~~ 134 (167)
T 2xs4_A 114 DLITVAAHEIGHLLGIEHSNV 134 (167)
T ss_dssp EHHHHHHHHHHHHHTBCCCSC
T ss_pred chhhhHHHHHHHhhcCCCCCC
Confidence 678999999999998888764
No 133
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=23.70 E-value=2.5e+02 Score=21.74 Aligned_cols=15 Identities=20% Similarity=0.363 Sum_probs=11.5
Q ss_pred CCceeeccCCcccCc
Q 038987 292 DRVWTCKFWTLENCV 306 (316)
Q Consensus 292 ~~~WsC~~CT~~N~~ 306 (316)
..+|.|+.|...+..
T Consensus 74 ~g~W~Cp~C~~~~~k 88 (91)
T 1weu_A 74 RGKWFCPRCSQESGP 88 (91)
T ss_dssp CSSCCCTTTCCCCSS
T ss_pred CCCEECcCccCcCCc
Confidence 357999999876653
No 134
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=23.69 E-value=30 Score=28.94 Aligned_cols=21 Identities=24% Similarity=0.289 Sum_probs=18.3
Q ss_pred HHHHHHHHHHhhhcCCCCCCh
Q 038987 47 HEVLDTMLHELCHNDIAPHDA 67 (316)
Q Consensus 47 ~~I~~vllHELaH~~~~~H~~ 67 (316)
..+..|++|||-|..--.|..
T Consensus 115 ~~~~~~~~he~gh~lgl~h~~ 135 (169)
T 1rm8_A 115 NDLFLVAVHELGHALGLEHSN 135 (169)
T ss_dssp EEHHHHHHHHHHHHHTCCCCS
T ss_pred ceeeeehhhhhhhhcCCCCCC
Confidence 457899999999999989974
No 135
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=23.57 E-value=23 Score=30.66 Aligned_cols=22 Identities=23% Similarity=0.905 Sum_probs=16.9
Q ss_pred CccccCcceecc----CC--CCCCCCCC
Q 038987 265 AMWECKACTFLN----HG--CGSVPHQG 286 (316)
Q Consensus 265 ~~W~C~~CTllN----~~--C~~C~rPr 286 (316)
..|.|..|-++= .| |..|..|+
T Consensus 154 ~~~~C~~CG~~~~g~~~p~~CP~C~~~k 181 (191)
T 1lko_A 154 TKWRCRNCGYVHEGTGAPELCPACAHPK 181 (191)
T ss_dssp EEEEETTTCCEEEEEECCSBCTTTCCBG
T ss_pred ceEEECCCCCEeeCCCCCCCCCCCcCCH
Confidence 379999998873 34 88887775
No 136
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=22.83 E-value=29 Score=29.21 Aligned_cols=21 Identities=24% Similarity=0.197 Sum_probs=17.8
Q ss_pred HHHHHHHHHhhhcCCCCCChh
Q 038987 48 EVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~H~~~ 68 (316)
.+..|++|||-|.+--.|...
T Consensus 112 ~~~~v~~HEiGHaLGL~H~~~ 132 (173)
T 1hy7_A 112 NLFLVAAHEIGHSLGLFHSAN 132 (173)
T ss_dssp EHHHHHHHHHHHHHTBCCCSC
T ss_pred hhhhhHHHHHHHhhcCCCCCC
Confidence 468999999999998888764
No 137
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=22.81 E-value=38 Score=28.23 Aligned_cols=21 Identities=24% Similarity=0.294 Sum_probs=18.3
Q ss_pred HHHHHHHHHhhhcCCCCCChh
Q 038987 48 EVLDTMLHELCHNDIAPHDAK 68 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~H~~~ 68 (316)
.+..|++|||-|..--.|...
T Consensus 107 ~~~~~~~HE~GH~lGl~H~~~ 127 (159)
T 1y93_A 107 NLFLTAVHEIGHSLGLGHSSD 127 (159)
T ss_dssp EHHHHHHHHHHHHTTCCCCSC
T ss_pred hhhhhhhhhhhhhhcCCCCCC
Confidence 478999999999998888764
No 138
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=21.73 E-value=34 Score=29.55 Aligned_cols=23 Identities=13% Similarity=0.366 Sum_probs=15.7
Q ss_pred ceeeccCCcccCc--CccccccCCC
Q 038987 294 VWTCKFWTLENCV--KLDKCSRVSK 316 (316)
Q Consensus 294 ~WsC~~CT~~N~~--~~~~C~~C~~ 316 (316)
.|.|..|.|.=.+ .-.+|.+|+.
T Consensus 155 ~~~C~~CG~~~~g~~~p~~CP~C~~ 179 (191)
T 1lko_A 155 KWRCRNCGYVHEGTGAPELCPACAH 179 (191)
T ss_dssp EEEETTTCCEEEEEECCSBCTTTCC
T ss_pred eEEECCCCCEeeCCCCCCCCCCCcC
Confidence 6999999876322 2238988873
No 139
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=21.42 E-value=31 Score=29.60 Aligned_cols=22 Identities=14% Similarity=0.344 Sum_probs=11.2
Q ss_pred ceeeccCCcccC-cCccccccCC
Q 038987 294 VWTCKFWTLENC-VKLDKCSRVS 315 (316)
Q Consensus 294 ~WsC~~CT~~N~-~~~~~C~~C~ 315 (316)
.|.|.-|.|.=. ..-.+|.+|+
T Consensus 138 ~~~C~~CG~i~~~~~p~~CP~Cg 160 (170)
T 3pwf_A 138 VYICPICGYTAVDEAPEYCPVCG 160 (170)
T ss_dssp EEECTTTCCEEESCCCSBCTTTC
T ss_pred eeEeCCCCCeeCCCCCCCCCCCC
Confidence 566666665311 1223666665
No 140
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=20.07 E-value=36 Score=28.45 Aligned_cols=20 Identities=20% Similarity=0.227 Sum_probs=17.5
Q ss_pred HHHHHHHHHhhhcCCCCCCh
Q 038987 48 EVLDTMLHELCHNDIAPHDA 67 (316)
Q Consensus 48 ~I~~vllHELaH~~~~~H~~ 67 (316)
.+..|++|||-|..--.|..
T Consensus 111 ~~~~v~~HE~GHalGl~H~~ 130 (163)
T 1i76_A 111 NLFLVAAHEFGHSLGLAHSS 130 (163)
T ss_dssp BHHHHHHHHHHHHHTBCCCS
T ss_pred hhhhhhHHHhhhhhcCCCCC
Confidence 47899999999999888875
Done!