Query 038990
Match_columns 505
No_of_seqs 396 out of 2378
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 08:22:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038990.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038990hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 1.4E-31 4.7E-36 261.8 25.2 228 257-491 14-273 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 1.3E-30 4.6E-35 256.1 11.5 228 256-491 14-276 (296)
3 1rlw_A Phospholipase A2, CALB 99.8 6.1E-19 2.1E-23 150.1 12.1 107 261-368 2-111 (126)
4 2z0u_A WW domain-containing pr 99.8 1.7E-19 5.9E-24 159.0 8.8 111 257-367 38-154 (155)
5 2fk9_A Protein kinase C, ETA t 99.8 4.5E-19 1.5E-23 155.8 9.5 107 257-367 24-144 (157)
6 2d8k_A Synaptotagmin VII; exoc 99.8 1.1E-18 3.6E-23 151.8 11.3 113 257-369 21-136 (141)
7 3f04_A Synaptotagmin-1; C2A, c 99.8 1E-18 3.5E-23 152.2 11.0 111 257-367 29-141 (143)
8 2dmh_A Myoferlin; beta-sandwic 99.8 3.1E-18 1.1E-22 148.6 13.9 104 259-366 4-110 (140)
9 1rsy_A Synaptotagmin I; calciu 99.8 1.3E-18 4.5E-23 153.2 11.4 112 257-368 37-150 (152)
10 2b3r_A Phosphatidylinositol-4- 99.8 2.2E-18 7.4E-23 148.3 12.2 110 258-368 16-130 (134)
11 2fk9_A Protein kinase C, ETA t 99.8 2.7E-18 9.3E-23 150.8 13.0 108 388-503 31-156 (157)
12 2dmh_A Myoferlin; beta-sandwic 99.8 1.1E-17 3.8E-22 145.0 14.7 115 387-504 8-133 (140)
13 1wfj_A Putative elicitor-respo 99.8 3.4E-18 1.2E-22 147.5 11.1 107 257-367 5-113 (136)
14 1rlw_A Phospholipase A2, CALB 99.7 9.3E-18 3.2E-22 142.7 13.0 112 388-504 5-125 (126)
15 2ep6_A MCTP2 protein; beta san 99.7 2.8E-18 9.5E-23 147.5 9.7 107 256-368 7-113 (133)
16 1gmi_A Protein kinase C, epsil 99.7 3.9E-18 1.3E-22 147.2 10.4 104 260-367 4-120 (136)
17 1ugk_A Synaptotagmin IV, KIAA1 99.7 8.6E-18 2.9E-22 145.4 12.4 112 257-368 17-133 (138)
18 3kwu_A MUNC13-1; calcium bindi 99.7 2.9E-17 1E-21 143.8 15.9 105 258-368 13-128 (148)
19 2chd_A Rabphilin-3A, exophilin 99.7 4.1E-18 1.4E-22 148.1 10.1 112 257-368 24-140 (142)
20 1wfm_A Synaptotagmin XIII; C2 99.7 1.2E-17 4.1E-22 144.5 11.8 109 257-368 21-132 (138)
21 2bwq_A Regulating synaptic mem 99.7 7E-18 2.4E-22 144.1 9.9 109 257-366 13-128 (129)
22 3fdw_A Synaptotagmin-like prot 99.7 3.2E-18 1.1E-22 150.0 7.3 113 257-369 18-135 (148)
23 3b7y_A E3 ubiquitin-protein li 99.7 1.5E-17 5.1E-22 146.6 11.2 110 258-368 16-134 (153)
24 2enp_A B/K protein; C2 type 1, 99.7 5.5E-18 1.9E-22 148.3 8.4 112 257-368 21-141 (147)
25 1wfj_A Putative elicitor-respo 99.7 2.1E-17 7.3E-22 142.5 11.9 113 388-505 12-131 (136)
26 2q3x_A Regulating synaptic mem 99.7 1.6E-17 5.4E-22 149.2 10.9 109 260-369 28-140 (171)
27 1a25_A CALB, protein kinase C 99.7 1.8E-17 6.1E-22 145.4 10.9 108 260-368 29-139 (149)
28 1rh8_A Piccolo protein; beta-s 99.7 2.8E-18 9.7E-23 149.2 5.6 108 261-368 17-138 (142)
29 2dmg_A KIAA1228 protein; beta- 99.7 8.8E-18 3E-22 146.1 8.6 112 257-369 19-136 (142)
30 3rdl_A Protein kinase C alpha 99.7 1.4E-17 4.8E-22 143.8 9.4 108 260-368 14-124 (137)
31 3pyc_A E3 ubiquitin-protein li 99.7 2.4E-17 8.2E-22 141.4 10.8 106 260-368 3-112 (132)
32 3kwu_A MUNC13-1; calcium bindi 99.7 1.7E-16 5.8E-21 138.9 15.8 112 388-503 19-146 (148)
33 2ep6_A MCTP2 protein; beta san 99.7 4.3E-17 1.5E-21 140.0 11.5 111 387-504 14-132 (133)
34 1v27_A Regulating synaptic mem 99.7 2.2E-17 7.5E-22 143.3 9.5 112 257-369 16-134 (141)
35 3b7y_A E3 ubiquitin-protein li 99.7 8.3E-17 2.8E-21 141.7 13.3 112 388-504 22-153 (153)
36 1gmi_A Protein kinase C, epsil 99.7 1.1E-16 3.8E-21 138.0 13.7 109 388-504 8-133 (136)
37 3m7f_B E3 ubiquitin-protein li 99.7 9.3E-17 3.2E-21 144.9 13.7 110 258-368 4-122 (176)
38 3fbk_A RGS3, RGP3, regulator o 99.7 3.2E-17 1.1E-21 144.4 10.4 112 257-369 22-138 (153)
39 1tjx_A Similar to synaptotagmi 99.7 8.1E-17 2.8E-21 142.8 12.7 112 257-368 20-147 (159)
40 3n5a_A Synaptotagmin-7; calciu 99.7 8.7E-17 3E-21 138.9 10.9 99 257-355 11-113 (138)
41 2cm5_A Rabphilin-3A; protein t 99.7 1.5E-16 5.2E-21 142.1 12.6 98 257-354 32-133 (166)
42 1w15_A Synaptotagmin IV; metal 99.7 1.1E-16 3.6E-21 141.1 10.1 97 257-353 25-125 (153)
43 2nq3_A Itchy homolog E3 ubiqui 99.7 1.1E-16 3.9E-21 143.5 9.6 106 259-369 33-143 (173)
44 2b3r_A Phosphatidylinositol-4- 99.7 2.7E-16 9.1E-21 135.2 10.8 104 387-493 21-133 (134)
45 3m7f_B E3 ubiquitin-protein li 99.7 5.6E-16 1.9E-20 139.8 13.0 113 387-504 9-141 (176)
46 3pyc_A E3 ubiquitin-protein li 99.7 6.3E-16 2.2E-20 132.5 12.6 110 388-503 7-132 (132)
47 1a25_A CALB, protein kinase C 99.6 1.8E-16 6.1E-21 138.9 7.5 105 388-496 33-145 (149)
48 3rdl_A Protein kinase C alpha 99.6 3E-16 1E-20 135.4 8.4 105 387-495 17-129 (137)
49 2nq3_A Itchy homolog E3 ubiqui 99.6 9.4E-16 3.2E-20 137.5 11.1 112 388-505 38-162 (173)
50 1wfm_A Synaptotagmin XIII; C2 99.6 2E-15 7E-20 130.4 12.2 103 387-492 27-134 (138)
51 3nsj_A Perforin-1; pore formin 99.6 8.6E-15 2.9E-19 153.0 18.5 164 193-366 304-491 (540)
52 3fbk_A RGS3, RGP3, regulator o 99.6 1.6E-15 5.3E-20 133.5 10.4 104 388-494 29-141 (153)
53 1rsy_A Synaptotagmin I; calciu 99.6 1.8E-15 6.1E-20 133.0 9.8 101 388-491 44-151 (152)
54 2cjt_A UNC-13 homolog A, MUNC1 99.6 4.2E-15 1.4E-19 127.0 11.2 88 260-357 3-91 (131)
55 1v27_A Regulating synaptic mem 99.6 3.5E-15 1.2E-19 129.3 10.3 104 387-494 22-137 (141)
56 2d8k_A Synaptotagmin VII; exoc 99.6 4.7E-15 1.6E-19 128.6 10.7 102 388-492 28-137 (141)
57 3fdw_A Synaptotagmin-like prot 99.6 2.1E-15 7.1E-20 132.0 8.2 103 387-492 24-136 (148)
58 3f04_A Synaptotagmin-1; C2A, c 99.6 3.4E-15 1.2E-19 129.8 9.3 100 388-490 36-142 (143)
59 2bwq_A Regulating synaptic mem 99.6 5.2E-15 1.8E-19 126.1 9.5 99 387-489 19-129 (129)
60 2z0u_A WW domain-containing pr 99.6 1.4E-15 4.7E-20 133.9 5.9 100 387-489 44-154 (155)
61 3l9b_A Otoferlin; C2-domain, b 99.6 1.8E-14 6E-19 121.5 11.9 114 386-504 20-140 (144)
62 2enp_A B/K protein; C2 type 1, 99.6 4.9E-15 1.7E-19 129.4 8.5 101 388-491 28-142 (147)
63 1cjy_A CPLA2, protein (cytosol 99.6 4E-15 1.4E-19 160.2 9.4 108 259-367 15-125 (749)
64 1rh8_A Piccolo protein; beta-s 99.6 1.4E-15 4.7E-20 132.1 4.5 102 388-492 20-140 (142)
65 1w15_A Synaptotagmin IV; metal 99.5 4E-15 1.4E-19 130.9 6.4 109 388-504 32-149 (153)
66 2q3x_A Regulating synaptic mem 99.5 1.1E-14 3.9E-19 130.5 9.1 99 388-491 32-140 (171)
67 2r83_A Synaptotagmin-1; C2A-C2 99.5 5.6E-14 1.9E-18 136.7 13.9 115 387-504 20-147 (284)
68 2cm5_A Rabphilin-3A; protein t 99.5 5.7E-15 1.9E-19 131.8 6.1 87 388-477 39-134 (166)
69 3jzy_A Intersectin 2; C2 domai 99.5 1.3E-14 4.4E-19 153.1 9.7 106 259-367 384-493 (510)
70 2cjs_A UNC-13 homolog A, MUNC1 99.5 3.5E-14 1.2E-18 126.3 10.6 90 258-357 10-100 (167)
71 2dmg_A KIAA1228 protein; beta- 99.5 8.2E-15 2.8E-19 127.2 6.3 101 388-492 26-137 (142)
72 1ugk_A Synaptotagmin IV, KIAA1 99.5 6.5E-14 2.2E-18 120.8 11.5 101 388-491 24-134 (138)
73 2chd_A Rabphilin-3A, exophilin 99.5 3.1E-14 1.1E-18 123.5 8.8 101 387-490 30-140 (142)
74 3n5a_A Synaptotagmin-7; calciu 99.5 7.9E-15 2.7E-19 126.5 5.0 109 388-504 18-135 (138)
75 2cjt_A UNC-13 homolog A, MUNC1 99.5 8.4E-14 2.9E-18 118.8 10.0 107 388-502 7-130 (131)
76 3jzy_A Intersectin 2; C2 domai 99.5 1.1E-13 3.9E-18 145.9 12.7 112 388-503 389-507 (510)
77 1tjx_A Similar to synaptotagmi 99.5 1.4E-13 4.7E-18 121.8 11.0 102 388-492 27-149 (159)
78 3l9b_A Otoferlin; C2-domain, b 99.5 1.1E-13 3.7E-18 116.7 9.3 101 260-368 19-122 (144)
79 2cjs_A UNC-13 homolog A, MUNC1 99.4 3.7E-13 1.3E-17 119.6 10.8 86 387-480 15-101 (167)
80 1dqv_A Synaptotagmin III; beta 99.4 2.6E-14 9E-19 139.8 3.0 98 259-356 149-250 (296)
81 1djx_A PLC-D1, phosphoinositid 99.4 3.8E-13 1.3E-17 143.7 12.0 105 260-367 495-604 (624)
82 3nsj_A Perforin-1; pore formin 99.4 2.5E-12 8.6E-17 134.4 15.3 105 388-502 396-502 (540)
83 3bxj_A RAS GTPase-activating p 99.3 4.4E-13 1.5E-17 139.6 0.5 113 388-504 13-157 (483)
84 1cjy_A CPLA2, protein (cytosol 99.3 8.3E-12 2.8E-16 134.5 9.9 105 387-498 19-132 (749)
85 1djx_A PLC-D1, phosphoinositid 99.3 2.7E-11 9.3E-16 129.4 13.1 109 388-503 499-623 (624)
86 3pfq_A PKC-B, PKC-beta, protei 99.2 9.8E-12 3.3E-16 135.2 9.2 108 260-368 170-280 (674)
87 3bxj_A RAS GTPase-activating p 99.2 6E-13 2E-17 138.6 -0.8 102 259-368 8-116 (483)
88 3pfq_A PKC-B, PKC-beta, protei 99.1 2.3E-10 7.8E-15 124.4 9.2 104 387-494 173-284 (674)
89 3qr0_A Phospholipase C-beta (P 99.0 4.8E-10 1.6E-14 122.1 10.1 89 261-357 649-744 (816)
90 3ohm_B 1-phosphatidylinositol- 99.0 3.9E-10 1.3E-14 123.4 9.3 89 261-357 724-818 (885)
91 2zkm_X 1-phosphatidylinositol- 99.0 5.1E-10 1.8E-14 122.5 9.6 97 260-367 676-779 (799)
92 3ohm_B 1-phosphatidylinositol- 98.9 6.1E-09 2.1E-13 114.0 11.7 105 388-504 727-845 (885)
93 3qr0_A Phospholipase C-beta (P 98.9 1E-08 3.5E-13 111.7 13.1 104 388-503 652-770 (816)
94 2zkm_X 1-phosphatidylinositol- 98.9 9.5E-09 3.3E-13 112.5 12.3 104 388-503 680-798 (799)
95 1yrk_A NPKC-delta, protein kin 98.8 3.1E-08 1E-12 80.9 11.5 89 403-503 26-124 (126)
96 2enj_A NPKC-theta, protein kin 98.8 4.8E-08 1.6E-12 80.8 10.3 104 388-503 12-129 (138)
97 1yrk_A NPKC-delta, protein kin 98.6 2.8E-07 9.6E-12 75.3 10.2 102 261-368 5-113 (126)
98 2enj_A NPKC-theta, protein kin 98.5 4.3E-07 1.5E-11 75.2 9.0 103 260-368 8-118 (138)
99 3l4c_A Dedicator of cytokinesi 90.9 2.8 9.4E-05 37.8 11.8 57 297-353 77-139 (220)
100 3hhm_A Phosphatidylinositol-4, 89.5 2.8 9.6E-05 46.8 12.8 106 261-368 354-470 (1091)
101 2wxf_A Phosphatidylinositol-4, 89.4 1.6 5.6E-05 48.3 10.9 106 260-368 215-339 (940)
102 2yrb_A Protein fantom; beta sa 87.0 1.6 5.6E-05 37.0 7.0 111 387-503 19-149 (156)
103 1e7u_A Phosphatidylinositol 3- 84.6 3.4 0.00012 45.8 10.0 106 262-368 218-345 (961)
104 2wxf_A Phosphatidylinositol-4, 83.2 2.1 7.1E-05 47.4 7.5 92 386-477 217-325 (940)
105 2y3a_A Phosphatidylinositol-4, 77.9 3.7 0.00013 46.1 7.3 106 260-368 351-485 (1092)
106 3hhm_A Phosphatidylinositol-4, 73.8 8.2 0.00028 43.2 8.6 90 388-478 357-457 (1091)
107 2y3a_A Phosphatidylinositol-4, 73.0 5.3 0.00018 44.8 6.9 90 388-477 355-471 (1092)
108 2yrb_A Protein fantom; beta sa 72.4 8.3 0.00028 32.6 6.4 101 257-359 13-121 (156)
109 3l4c_A Dedicator of cytokinesi 72.2 17 0.00057 32.7 8.7 60 416-475 78-139 (220)
110 1e7u_A Phosphatidylinositol 3- 69.2 11 0.00038 41.8 8.3 90 389-478 221-332 (961)
111 2ks1_B Epidermal growth factor 24.0 14 0.00048 23.9 -0.3 8 28-35 32-39 (44)
112 2l2t_A Receptor tyrosine-prote 20.2 19 0.00065 23.3 -0.3 8 28-35 31-38 (44)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=1.4e-31 Score=261.81 Aligned_cols=228 Identities=24% Similarity=0.345 Sum_probs=184.7
Q ss_pred CcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeecC--CCCEEEEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKDP--ETQVLQLHVYD 334 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~--~~~~L~v~v~d 334 (505)
+....|.|.|+|++|++|+.+|..|.+||||++++++.....++|+++++++||.|||+|.|.+... ....|.|+|||
T Consensus 14 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d 93 (284)
T 2r83_A 14 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYD 93 (284)
T ss_dssp EETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEE
Confidence 4456799999999999999999889999999999976544457899999999999999999998643 35799999999
Q ss_pred cCCCCCCcccEEEEEECccCCCCCeeEEEEeccccCCCCCccccccccc---------ccceEEEEEeeecCCCCC---C
Q 038990 335 WEKVGTHDKLGMQVVPLRSLTPNETKELTLDLVKNTNPNDPQDKKFERK---------ESEVGKATEYGAKDLEGK---H 402 (505)
Q Consensus 335 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~~~~~~~~~~~~~~g~---------~~~~a~v~v~~a~~L~~~---~ 402 (505)
+|.+++|++||++.+++.++..+.....|++|....... ....|. ......|.|++|++|+.. +
T Consensus 94 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~----~~~~G~i~l~l~~~p~~~~l~v~v~~a~~L~~~d~~~ 169 (284)
T 2r83_A 94 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEE----QEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGG 169 (284)
T ss_dssp CCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCC----CCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTS
T ss_pred CCCCCCCceeEEEEEcchhcccCCcceeEEEeecccccc----ccccccEEEEEEecCcCCceEEEEEEeECCCCcCCCC
Confidence 999999999999999999999888888899886532110 111221 012248999999999863 5
Q ss_pred CCCCEEEEEEcC-----eEEEeecccCCCCCccCceEEEEeeCCCCC-CeEEEEEEEccCCccCCCCCccEEEEEecccc
Q 038990 403 HNNPYAVVICRG-----EQKKTKMIKKCRDPIWNEEFQFDFEEAPLK-EKIHIEVKSKRRGLRLRSKESLGYVDINLHDV 476 (505)
Q Consensus 403 ~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~~-~~l~i~V~d~~~~~~~~~d~~lG~~~i~L~~l 476 (505)
.+||||++++.. ..++|++++++.||+|||+|.|.+...... ..|.|+|||++. ++++++||++.++++.+
T Consensus 170 ~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~---~~~~~~iG~~~i~l~~~ 246 (284)
T 2r83_A 170 LSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK---IGKNDAIGKVFVGYNST 246 (284)
T ss_dssp CCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCS---SSCCCEEEEEEEETTCC
T ss_pred CcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCC---CCCCcEEEEEEECCCCC
Confidence 799999999852 346999999999999999999999765443 379999999984 78899999999999763
Q ss_pred ----------cc--CCEEeEEEEeCCC
Q 038990 477 ----------LH--NGRLKEKYHLINS 491 (505)
Q Consensus 477 ----------~~--~~~~~~~~~L~~~ 491 (505)
+. +....+||+|...
T Consensus 247 ~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 247 GAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp HHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred CcHHHHHHHHHHCCCCchheeeecCCc
Confidence 22 3456799999764
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.97 E-value=1.3e-30 Score=256.13 Aligned_cols=228 Identities=25% Similarity=0.357 Sum_probs=175.4
Q ss_pred CCcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeecC--CCCEEEEEEE
Q 038990 256 AIKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKDP--ETQVLQLHVY 333 (505)
Q Consensus 256 ~~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~--~~~~L~v~v~ 333 (505)
.+....+.|.|+|++|++|+.+|..|.+||||++++.+.....++|+++++|+||.|||+|.|.+... ....|.|+||
T Consensus 14 ~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~ 93 (296)
T 1dqv_A 14 RYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVY 93 (296)
T ss_dssp ECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEE
T ss_pred EEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEE
Confidence 35567899999999999999999999999999999954333457999999999999999999998643 2458999999
Q ss_pred EcCCCCCCcccEEEEEE-CccCCC-CCeeEEEEeccccCCCCCccccccccc---------ccceEEEEEeeecCCCCC-
Q 038990 334 DWEKVGTHDKLGMQVVP-LRSLTP-NETKELTLDLVKNTNPNDPQDKKFERK---------ESEVGKATEYGAKDLEGK- 401 (505)
Q Consensus 334 d~d~~~~d~~lG~~~i~-l~~l~~-~~~~~~~l~l~~~~~~~~~~~~~~~g~---------~~~~a~v~v~~a~~L~~~- 401 (505)
|+|.+++|++||++.++ +.++.. ......|.+|..... .....|. .....+|.|++|++|+..
T Consensus 94 d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~-----~~~~~G~i~vsl~y~~~~~~l~v~v~~a~~L~~~d 168 (296)
T 1dqv_A 94 DFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGS-----EKADLGELNFSLCYLPTAGLLTVTIIKASNLKAMD 168 (296)
T ss_dssp ECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSS-----CCSCCCEEEEEEEEETTTTEEEEEEEEEESCCCCS
T ss_pred EcCCCCCCceEEEEEeccccccccCCccceeeeccccccc-----cccccceEEEEEEeccccceeEEEEEEeecCCccC
Confidence 99999999999999996 444432 233445666643211 1111221 012248999999999763
Q ss_pred --CCCCCEEEEEEc--C---eEEEeecccCCCCCccCceEEEEeeCCCCC-CeEEEEEEEccCCccCCCCCccEEEEEec
Q 038990 402 --HHNNPYAVVICR--G---EQKKTKMIKKCRDPIWNEEFQFDFEEAPLK-EKIHIEVKSKRRGLRLRSKESLGYVDINL 473 (505)
Q Consensus 402 --~~~dpyv~v~~~--~---~~~kT~v~~~t~nP~wne~f~f~v~~~~~~-~~l~i~V~d~~~~~~~~~d~~lG~~~i~L 473 (505)
+.+||||++++. + .+++|++++++.||+|||.|.|.+....+. ..|.|+|||++. ++++++||++.+++
T Consensus 169 ~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~---~~~~~~iG~~~i~l 245 (296)
T 1dqv_A 169 LTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDC---IGHNEVIGVCRVGP 245 (296)
T ss_dssp SSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCS---SSCCEEEEECCCSS
T ss_pred CCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCC---CCCCceEEEEEECC
Confidence 578999999996 2 456999999999999999999998765332 379999999984 77899999999999
Q ss_pred ccccc-------------CCEEeEEEEeCCC
Q 038990 474 HDVLH-------------NGRLKEKYHLINS 491 (505)
Q Consensus 474 ~~l~~-------------~~~~~~~~~L~~~ 491 (505)
+++.. +....+|++|...
T Consensus 246 ~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 246 EAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp CTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred ccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 87643 2345677777654
No 3
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.79 E-value=6.1e-19 Score=150.12 Aligned_cols=107 Identities=28% Similarity=0.451 Sum_probs=95.0
Q ss_pred eEEEEEEEeeccCccc---cCCCCCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeecCCCCEEEEEEEEcCC
Q 038990 261 VGILHVKVIRAIRLLK---MDIFGASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKDPETQVLQLHVYDWEK 337 (505)
Q Consensus 261 ~g~L~V~v~~a~~L~~---~d~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~~~~~L~v~v~d~d~ 337 (505)
.|.|.|+|++|++|+. .+..|.+||||++++++.....++|+++++++||.|||+|.|.+.......|.++|||+|.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 5899999999999998 4667899999999998753345799999999999999999999976677899999999998
Q ss_pred CCCCcccEEEEEECccCCCCCeeEEEEeccc
Q 038990 338 VGTHDKLGMQVVPLRSLTPNETKELTLDLVK 368 (505)
Q Consensus 338 ~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~ 368 (505)
. +|++||++.++++++..+.....|++|..
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~ 111 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGEKKEVPFIFNQ 111 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTCEEEEEEEETT
T ss_pred C-CCceeEEEEEEHHHccCCCcEEEEEEcCC
Confidence 7 59999999999999999888889998853
No 4
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.79 E-value=1.7e-19 Score=158.96 Aligned_cols=111 Identities=13% Similarity=0.109 Sum_probs=95.5
Q ss_pred CcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECC---eecceeeeeeeCCCCCCeEceeEEEEeecC--CCCEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSG---ERIPAKKTSVKMKTLNPEWNEDFKLTVKDP--ETQVLQLH 331 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~---~~~~~~~T~~~~~t~nP~wne~f~~~v~~~--~~~~L~v~ 331 (505)
+....+.|+|+|++|+||+++|..|.+||||++++.+ .+..++||+++++|+||+|||+|.|.+... ....|.|+
T Consensus 38 y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~ 117 (155)
T 2z0u_A 38 YDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVD 117 (155)
T ss_dssp EETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEE
T ss_pred EcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEE
Confidence 4556799999999999999999999999999999976 333357999999999999999999998642 25689999
Q ss_pred EEEcCCCCCCcccEEEEEECccCCC-CCeeEEEEecc
Q 038990 332 VYDWEKVGTHDKLGMQVVPLRSLTP-NETKELTLDLV 367 (505)
Q Consensus 332 v~d~d~~~~d~~lG~~~i~l~~l~~-~~~~~~~l~l~ 367 (505)
|||+|..++|++||++.++++++.. +.....|++|.
T Consensus 118 V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 118 VCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 9999999999999999999999964 55667788764
No 5
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.78 E-value=4.5e-19 Score=155.76 Aligned_cols=107 Identities=29% Similarity=0.340 Sum_probs=93.2
Q ss_pred CcCCeEEEEEEEeeccCccccCCC----------CCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeecCCCC
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIF----------GASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKDPETQ 326 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~----------g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~~~~ 326 (505)
.....|.|+|+|++|++|+++|.. |.+||||++++++.+. .+|+++++|+||.|||+|.|.+.+ .+
T Consensus 24 ~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~--~kT~v~~ktlnP~WNE~F~f~v~~--~~ 99 (157)
T 2fk9_A 24 TMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRV--GQTSTKQKTNKPTYNEEFCANVTD--GG 99 (157)
T ss_dssp CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEE--EECCCCSSCSSCEEEEEEEEEEEE--EC
T ss_pred hccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEee--EEeeecCCCCCCccCcEEEEEcCC--CC
Confidence 345789999999999999988832 6799999999987653 589999999999999999999975 46
Q ss_pred EEEEEEEEcCCCCCCcccEEEEEECccCCCC----CeeEEEEecc
Q 038990 327 VLQLHVYDWEKVGTHDKLGMQVVPLRSLTPN----ETKELTLDLV 367 (505)
Q Consensus 327 ~L~v~v~d~d~~~~d~~lG~~~i~l~~l~~~----~~~~~~l~l~ 367 (505)
.|.++|||+|.+++|++||++.++++++..+ ...+.|++|.
T Consensus 100 ~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~ 144 (157)
T 2fk9_A 100 HLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE 144 (157)
T ss_dssp EEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB
T ss_pred EEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC
Confidence 8999999999999999999999999998754 5678898874
No 6
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=1.1e-18 Score=151.75 Aligned_cols=113 Identities=29% Similarity=0.463 Sum_probs=98.4
Q ss_pred CcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeec---CCCCEEEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKD---PETQVLQLHVY 333 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~---~~~~~L~v~v~ 333 (505)
+....+.|+|+|++|++|+.++..|.+||||++++.+.....++|+++++++||.|||+|.|.+.. .....|.|+||
T Consensus 21 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 100 (141)
T 2d8k_A 21 YNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVL 100 (141)
T ss_dssp ECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEE
Confidence 445679999999999999999988999999999996544345799999999999999999998532 23578999999
Q ss_pred EcCCCCCCcccEEEEEECccCCCCCeeEEEEecccc
Q 038990 334 DWEKVGTHDKLGMQVVPLRSLTPNETKELTLDLVKN 369 (505)
Q Consensus 334 d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~~ 369 (505)
|++.+++|++||++.+++.++..+.....|++|...
T Consensus 101 d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 101 DYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp ECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred ECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 999999999999999999999988888899988654
No 7
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.77 E-value=1e-18 Score=152.17 Aligned_cols=111 Identities=32% Similarity=0.455 Sum_probs=98.4
Q ss_pred CcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeecC--CCCEEEEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKDP--ETQVLQLHVYD 334 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~--~~~~L~v~v~d 334 (505)
+....+.|.|+|++|++|+.++..+.+||||++++.+.....++|+++++++||.|||+|.|.+... ....|.|+|||
T Consensus 29 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 108 (143)
T 3f04_A 29 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 108 (143)
T ss_dssp EETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEe
Confidence 4557799999999999999999889999999999965444457999999999999999999998633 45789999999
Q ss_pred cCCCCCCcccEEEEEECccCCCCCeeEEEEecc
Q 038990 335 WEKVGTHDKLGMQVVPLRSLTPNETKELTLDLV 367 (505)
Q Consensus 335 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~ 367 (505)
+|.+++|++||++.++|.++..+.....|++|.
T Consensus 109 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 109 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred CCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 999999999999999999999988888999875
No 8
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=3.1e-18 Score=148.57 Aligned_cols=104 Identities=31% Similarity=0.500 Sum_probs=93.9
Q ss_pred CCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeecC---CCCEEEEEEEEc
Q 038990 259 KPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKDP---ETQVLQLHVYDW 335 (505)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~---~~~~L~v~v~d~ 335 (505)
...|.|.|+|++|++|+.++. |.+||||++++++.+ ++|+++++++||+|||+|.|.+..+ ....|.++|||+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~---~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~ 79 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEK---KKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDF 79 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCE---EECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEET
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEe---EEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEEC
Confidence 457899999999999999998 999999999999754 6999999999999999999999754 367899999999
Q ss_pred CCCCCCcccEEEEEECccCCCCCeeEEEEec
Q 038990 336 EKVGTHDKLGMQVVPLRSLTPNETKELTLDL 366 (505)
Q Consensus 336 d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l 366 (505)
|..++|++||++.+++.++..+.....|+++
T Consensus 80 d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l 110 (140)
T 2dmh_A 80 ETIGQNKLIGTATVALKDLTGDQSRSLPYKL 110 (140)
T ss_dssp TCSSSCCCCEEEEEEGGGTCSSSCEEEEEEE
T ss_pred CCCCCCceEEEEEEEHHHhccCCCceeEEee
Confidence 9999999999999999999988877778773
No 9
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=1.3e-18 Score=153.20 Aligned_cols=112 Identities=32% Similarity=0.452 Sum_probs=98.3
Q ss_pred CcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeecC--CCCEEEEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKDP--ETQVLQLHVYD 334 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~--~~~~L~v~v~d 334 (505)
+....+.|.|+|++|+||+.+|..+.+||||++++.+.....++|+++++++||.|||+|.|.+... ....|.|+|||
T Consensus 37 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 116 (152)
T 1rsy_A 37 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 116 (152)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEE
Confidence 4557799999999999999999889999999999965433457999999999999999999988642 35789999999
Q ss_pred cCCCCCCcccEEEEEECccCCCCCeeEEEEeccc
Q 038990 335 WEKVGTHDKLGMQVVPLRSLTPNETKELTLDLVK 368 (505)
Q Consensus 335 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~ 368 (505)
+|.+++|++||++.+++.++..+.....|++|..
T Consensus 117 ~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 117 FDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 9999999999999999999988888888998753
No 10
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.77 E-value=2.2e-18 Score=148.34 Aligned_cols=110 Identities=24% Similarity=0.298 Sum_probs=95.0
Q ss_pred cCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCe--ecceeeeeeeCCCCCCeEceeEEEE-eecC--CCCEEEEEE
Q 038990 258 KKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGE--RIPAKKTSVKMKTLNPEWNEDFKLT-VKDP--ETQVLQLHV 332 (505)
Q Consensus 258 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~~~~~t~nP~wne~f~~~-v~~~--~~~~L~v~v 332 (505)
+...|.|.|+|++|+||+. +..|.+||||++++.+. ...+++|+++++|+||.|||+|.|. +... ....|.|+|
T Consensus 16 ~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V 94 (134)
T 2b3r_A 16 SYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSV 94 (134)
T ss_dssp EEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEE
T ss_pred eecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEE
Confidence 4467899999999999997 77789999999998433 2345799999999999999999999 7532 457899999
Q ss_pred EEcCCCCCCcccEEEEEECccCCCCCeeEEEEeccc
Q 038990 333 YDWEKVGTHDKLGMQVVPLRSLTPNETKELTLDLVK 368 (505)
Q Consensus 333 ~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~ 368 (505)
||+|..++|++||++.++++++..+.....|++|..
T Consensus 95 ~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 95 LSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp EECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred EECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 999999999999999999999998888889998854
No 11
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.77 E-value=2.7e-18 Score=150.76 Aligned_cols=108 Identities=19% Similarity=0.239 Sum_probs=95.5
Q ss_pred EEEEEeeecCCCCC-------------CCCCCEEEEEEcCeE-EEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEEE
Q 038990 388 GKATEYGAKDLEGK-------------HHNNPYAVVICRGEQ-KKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKS 453 (505)
Q Consensus 388 a~v~v~~a~~L~~~-------------~~~dpyv~v~~~~~~-~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d 453 (505)
.+|+|.+|++|+.. +.+||||++++++.+ .+|+++++|.||+|||+|+|.+.+. ..|.|+|||
T Consensus 31 L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~~---~~L~~~V~D 107 (157)
T 2fk9_A 31 LRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTDG---GHLELAVFH 107 (157)
T ss_dssp EEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE---CEEEEEEEE
T ss_pred EEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCCC---CEEEEEEEE
Confidence 48999999999853 468999999998876 5999999999999999999999763 589999999
Q ss_pred ccCCccCCCCCccEEEEEeccccccC----CEEeEEEEeCCCCCceEEEEEEEE
Q 038990 454 KRRGLRLRSKESLGYVDINLHDVLHN----GRLKEKYHLINSKNGAVQVEIKWK 503 (505)
Q Consensus 454 ~~~~~~~~~d~~lG~~~i~L~~l~~~----~~~~~~~~L~~~~~G~i~l~~~~~ 503 (505)
++. ++.|++||++.|+|+++..+ ...+.||+|.. +|+|+|+++|.
T Consensus 108 ~d~---~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--~G~i~l~l~~~ 156 (157)
T 2fk9_A 108 ETP---LGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--EGKVFVVITLT 156 (157)
T ss_dssp CCS---SSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--SCEEEEEEEEC
T ss_pred CCC---CCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--CcEEEEEEEEE
Confidence 884 77899999999999999865 67799999974 89999999985
No 12
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=1.1e-17 Score=145.04 Aligned_cols=115 Identities=23% Similarity=0.432 Sum_probs=100.2
Q ss_pred eEEEEEeeecCCCCC--CCCCCEEEEEEcCeEEEeecccCCCCCccCceEEEEeeCCC--CCCeEEEEEEEccCCccCCC
Q 038990 387 VGKATEYGAKDLEGK--HHNNPYAVVICRGEQKKTKMIKKCRDPIWNEEFQFDFEEAP--LKEKIHIEVKSKRRGLRLRS 462 (505)
Q Consensus 387 ~a~v~v~~a~~L~~~--~~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~--~~~~l~i~V~d~~~~~~~~~ 462 (505)
...|+|++|++|+.. +.+||||++++++++++|++++++.||+|||+|.|.+..+. ....|.|+|||++. ++.
T Consensus 8 ~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~---~~~ 84 (140)
T 2dmh_A 8 MLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET---IGQ 84 (140)
T ss_dssp EEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC---SSS
T ss_pred EEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC---CCC
Confidence 358999999999864 58999999999999999999999999999999999997643 24689999999984 678
Q ss_pred CCccEEEEEeccccccCCEEeEEEE---eCCCC----CceEEEEEEEEe
Q 038990 463 KESLGYVDINLHDVLHNGRLKEKYH---LINSK----NGAVQVEIKWKA 504 (505)
Q Consensus 463 d~~lG~~~i~L~~l~~~~~~~~~~~---L~~~~----~G~i~l~~~~~~ 504 (505)
+++||++.++|.++..+...+.||+ |.+.. .|+|+|+++|.|
T Consensus 85 ~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p 133 (140)
T 2dmh_A 85 NKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDP 133 (140)
T ss_dssp CCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECC
T ss_pred CceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEEC
Confidence 8999999999999988877789988 65532 499999999987
No 13
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.75 E-value=3.4e-18 Score=147.51 Aligned_cols=107 Identities=29% Similarity=0.480 Sum_probs=94.8
Q ss_pred CcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeeeC-CCCCCeEceeEEEEeecCCCCEEEEEEEEc
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVKM-KTLNPEWNEDFKLTVKDPETQVLQLHVYDW 335 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~~-~t~nP~wne~f~~~v~~~~~~~L~v~v~d~ 335 (505)
...+.|.|+|+|++|++|+.++..|.+||||++++++.. .+|++++ +++||.|||+|.|.+.+ ....|.|+|||+
T Consensus 5 ~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~ 80 (136)
T 1wfj_A 5 SSGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQD---QKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDK 80 (136)
T ss_dssp CCCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCE---EECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCS
T ss_pred CCCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCcc---ceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEEC
Confidence 456899999999999999999988999999999998765 5889988 89999999999999986 567899999999
Q ss_pred CCCCCCcccEEEEEECccC-CCCCeeEEEEecc
Q 038990 336 EKVGTHDKLGMQVVPLRSL-TPNETKELTLDLV 367 (505)
Q Consensus 336 d~~~~d~~lG~~~i~l~~l-~~~~~~~~~l~l~ 367 (505)
+.+++|++||++.+++.++ ..+.....|++|.
T Consensus 81 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~ 113 (136)
T 1wfj_A 81 DVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV 113 (136)
T ss_dssp SSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE
T ss_pred CCCCCCceEEEEEEEHHHhccCCCCCcEEEEee
Confidence 9999999999999999998 4454556777775
No 14
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.75 E-value=9.3e-18 Score=142.74 Aligned_cols=112 Identities=13% Similarity=0.285 Sum_probs=97.4
Q ss_pred EEEEEeeecCCCCC------CCCCCEEEEEEcC---eEEEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEEEccCCc
Q 038990 388 GKATEYGAKDLEGK------HHNNPYAVVICRG---EQKKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRGL 458 (505)
Q Consensus 388 a~v~v~~a~~L~~~------~~~dpyv~v~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~~ 458 (505)
..|+|++|++|+.. +.+||||++++++ ..++|++++++.||+|||+|.|.+..+ ....|.|+|||++.
T Consensus 5 L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~~l~i~V~d~d~-- 81 (126)
T 1rlw_A 5 FTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPN-QENVLEITLMDANY-- 81 (126)
T ss_dssp EEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTT-SCCEEEEEEEECCS--
T ss_pred EEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCC-CCCEEEEEEEECCC--
Confidence 47899999999872 6899999999986 567999999999999999999999654 34689999999984
Q ss_pred cCCCCCccEEEEEeccccccCCEEeEEEEeCCCCCceEEEEEEEEe
Q 038990 459 RLRSKESLGYVDINLHDVLHNGRLKEKYHLINSKNGAVQVEIKWKA 504 (505)
Q Consensus 459 ~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~~G~i~l~~~~~~ 504 (505)
. ++++||++.++|+++..+.....||+|.+.++|+|+++++..|
T Consensus 82 -~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~g~i~~~le~~~ 125 (126)
T 1rlw_A 82 -V-MDETLGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMSLEVAS 125 (126)
T ss_dssp -S-CCEEEEEEEEEGGGSCTTCEEEEEEEETTTEEEEEEEEEECCC
T ss_pred -C-CCceeEEEEEEHHHccCCCcEEEEEEcCCCceEEEEEEEEeCC
Confidence 4 5889999999999999888889999999877888888887543
No 15
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.75 E-value=2.8e-18 Score=147.51 Aligned_cols=107 Identities=38% Similarity=0.567 Sum_probs=94.8
Q ss_pred CCcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeecCCCCEEEEEEEEc
Q 038990 256 AIKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKDPETQVLQLHVYDW 335 (505)
Q Consensus 256 ~~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~~~~~L~v~v~d~ 335 (505)
.+..+.|.|+|+|++|++|+.++..|.+||||++++++.. .+|+++++++||.|||+|.|.+.+. .+.|.++|||+
T Consensus 7 ~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~t~nP~wne~f~f~~~~~-~~~l~i~V~d~ 82 (133)
T 2ep6_A 7 GDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDR---LQTHTVYKNLNPEWNKVFTFPIKDI-HDVLEVTVFDE 82 (133)
T ss_dssp CSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEE---EECCCCSSCSSCCCCEEEEEEESCT-TCEEEEEEEEE
T ss_pred cccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEE---EEeeeecCCCCCccccEEEEEecCC-CCEEEEEEEEC
Confidence 4566889999999999999999988999999999999864 5899999999999999999999764 57899999999
Q ss_pred CCCCCCcccEEEEEECccCCCCCeeEEEEeccc
Q 038990 336 EKVGTHDKLGMQVVPLRSLTPNETKELTLDLVK 368 (505)
Q Consensus 336 d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~ 368 (505)
|..++|++||++.+++.++..+.. .|++|..
T Consensus 83 d~~~~~~~lG~~~i~l~~l~~~~~--~w~~L~~ 113 (133)
T 2ep6_A 83 DGDKPPDFLGKVAIPLLSIRDGQP--NCYVLKN 113 (133)
T ss_dssp ETTEEEEECCBCEEEGGGCCSSCC--EECCCBC
T ss_pred CCCCCCCeeEEEEEEHHHccCCCc--eEEEeec
Confidence 998899999999999999987654 5666643
No 16
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.75 E-value=3.9e-18 Score=147.20 Aligned_cols=104 Identities=27% Similarity=0.400 Sum_probs=89.9
Q ss_pred CeEEEEEEEeeccCccccCCCCC-----------CCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeecCCCCEE
Q 038990 260 PVGILHVKVIRAIRLLKMDIFGA-----------SDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKDPETQVL 328 (505)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~-----------~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~~~~~L 328 (505)
..|.|+|+|++|++|+++|..++ +||||++++++... .+|+++++|+||.|||+|.|.+.+. +.|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~--~~T~~~~~t~nP~WnE~f~f~v~~~--~~L 79 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRI--GQTATKQKTNSPAWHDEFVTDVCNG--RKI 79 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEE--EECCCCSSCSSCEEEEEEEEEEEEE--CEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEe--eeeeEECCCcCCccCCEEEEEecCC--CEE
Confidence 46999999999999999886544 99999999987643 5889999999999999999999764 789
Q ss_pred EEEEEEcCCCCCCcccEEEEEECccCCCCC--eeEEEEecc
Q 038990 329 QLHVYDWEKVGTHDKLGMQVVPLRSLTPNE--TKELTLDLV 367 (505)
Q Consensus 329 ~v~v~d~d~~~~d~~lG~~~i~l~~l~~~~--~~~~~l~l~ 367 (505)
.++|||+|..++|++||++.++++++..+. ..+.|++|.
T Consensus 80 ~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~ 120 (136)
T 1gmi_A 80 ELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE 120 (136)
T ss_dssp EEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB
T ss_pred EEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcC
Confidence 999999999999999999999999988753 346787663
No 17
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.75 E-value=8.6e-18 Score=145.40 Aligned_cols=112 Identities=23% Similarity=0.391 Sum_probs=94.3
Q ss_pred CcCCeEEEEEEEeeccCccccCCC-CCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEE-eecC--CCCEEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIF-GASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLT-VKDP--ETQVLQLHV 332 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~-g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~-v~~~--~~~~L~v~v 332 (505)
+....+.|.|+|++|+||+.+|.. +.+||||++++.+.....++|+++++++||+|||+|.|. +... ....|.|+|
T Consensus 17 y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V 96 (138)
T 1ugk_A 17 YNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTI 96 (138)
T ss_dssp EEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEE
Confidence 445678999999999999999985 899999999997543345799999999999999999996 5432 346899999
Q ss_pred EEcCCCCCCcccEEEEEECccCCCCCee-EEEEeccc
Q 038990 333 YDWEKVGTHDKLGMQVVPLRSLTPNETK-ELTLDLVK 368 (505)
Q Consensus 333 ~d~d~~~~d~~lG~~~i~l~~l~~~~~~-~~~l~l~~ 368 (505)
||+|.+++|++||++.++++++..+... ..|.+|.+
T Consensus 97 ~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 97 LSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred EECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 9999999999999999999999876544 56777754
No 18
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.74 E-value=2.9e-17 Score=143.79 Aligned_cols=105 Identities=27% Similarity=0.464 Sum_probs=91.4
Q ss_pred cCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeecCCCCEEEEEEEEcCC
Q 038990 258 KKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKDPETQVLQLHVYDWEK 337 (505)
Q Consensus 258 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~~~~~L~v~v~d~d~ 337 (505)
....|.|+|+|++|++|+.+|..|.+||||++++++.. ++|+++++++||.|||+|.|.+..+ .+.|.++|||+|.
T Consensus 13 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~ 88 (148)
T 3kwu_A 13 SKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTK---KRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDD 88 (148)
T ss_dssp --CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEE---EECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCC
T ss_pred cccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEE---EECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCC
Confidence 34579999999999999999999999999999998754 5899999999999999999999765 4789999999998
Q ss_pred C-----------CCCcccEEEEEECccCCCCCeeEEEEeccc
Q 038990 338 V-----------GTHDKLGMQVVPLRSLTPNETKELTLDLVK 368 (505)
Q Consensus 338 ~-----------~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~ 368 (505)
. ++|++||++.++++++. .....|++|..
T Consensus 89 ~~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~ 128 (148)
T 3kwu_A 89 DIKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDK 128 (148)
T ss_dssp SHHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBC
T ss_pred CccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEccc
Confidence 5 78999999999999994 34567777754
No 19
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.74 E-value=4.1e-18 Score=148.15 Aligned_cols=112 Identities=29% Similarity=0.457 Sum_probs=97.0
Q ss_pred CcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCe--ecceeeeeeeCCCCCCeEceeEEEE-eecC--CCCEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGE--RIPAKKTSVKMKTLNPEWNEDFKLT-VKDP--ETQVLQLH 331 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~~~~~t~nP~wne~f~~~-v~~~--~~~~L~v~ 331 (505)
+....+.|.|+|++|++|+.++..|.+||||++++.+. +...++|+++++++||.|||+|.|. +... ....|.|+
T Consensus 24 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 103 (142)
T 2chd_A 24 YDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRIS 103 (142)
T ss_dssp EEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEE
Confidence 44577999999999999999998899999999999752 2345799999999999999999998 5321 13689999
Q ss_pred EEEcCCCCCCcccEEEEEECccCCCCCeeEEEEeccc
Q 038990 332 VYDWEKVGTHDKLGMQVVPLRSLTPNETKELTLDLVK 368 (505)
Q Consensus 332 v~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~ 368 (505)
|||++..++|++||++.++++++..+..+.+|++|.+
T Consensus 104 V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 104 VCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred EEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 9999999999999999999999999988999998754
No 20
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.74 E-value=1.2e-17 Score=144.46 Aligned_cols=109 Identities=20% Similarity=0.232 Sum_probs=92.3
Q ss_pred CcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCe-ecceeeeeeeCCCCCCeEceeEEEEeecC--CCCEEEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGE-RIPAKKTSVKMKTLNPEWNEDFKLTVKDP--ETQVLQLHVY 333 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~-~~~~~~T~~~~~t~nP~wne~f~~~v~~~--~~~~L~v~v~ 333 (505)
+....+.|+|+|++|++ +|..|.+||||++++.+. ....++|+++++|+||+|||+|.|.+... ....|.|+||
T Consensus 21 y~~~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~ 97 (138)
T 1wfm_A 21 YDCQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLR 97 (138)
T ss_dssp EETTTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEE
T ss_pred EeCCCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEE
Confidence 45567999999999993 677899999999999531 22346899999999999999999998643 2568999999
Q ss_pred EcCCCCCCcccEEEEEECccCCCCCeeEEEEeccc
Q 038990 334 DWEKVGTHDKLGMQVVPLRSLTPNETKELTLDLVK 368 (505)
Q Consensus 334 d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~ 368 (505)
|+|.+++|++||++.++|.++..+.....|++|..
T Consensus 98 d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 98 TCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp ECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCC
T ss_pred ECCCCCCCcEEEEEEEEcccccCcccccceeeCcC
Confidence 99999999999999999999987667778888865
No 21
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.73 E-value=7e-18 Score=144.13 Aligned_cols=109 Identities=21% Similarity=0.320 Sum_probs=87.8
Q ss_pred CcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCe--ecceeeeeeeCCCCCCeEceeEEEEeec---CCCCEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGE--RIPAKKTSVKMKTLNPEWNEDFKLTVKD---PETQVLQLH 331 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~~~~~t~nP~wne~f~~~v~~---~~~~~L~v~ 331 (505)
+....+.|.|+|++|+||+.++..|.+||||++++.+. ....++|+++++|+||.|||+|.|.+.. .....|.++
T Consensus 13 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~ 92 (129)
T 2bwq_A 13 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 92 (129)
T ss_dssp EETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEE
T ss_pred EccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEE
Confidence 44567999999999999999998899999999999442 2345799999999999999999999532 235789999
Q ss_pred EEEcCCCCC--CcccEEEEEECccCCCCCeeEEEEec
Q 038990 332 VYDWEKVGT--HDKLGMQVVPLRSLTPNETKELTLDL 366 (505)
Q Consensus 332 v~d~d~~~~--d~~lG~~~i~l~~l~~~~~~~~~l~l 366 (505)
|||+|..++ |++||++.+++.++.... ...|++|
T Consensus 93 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 93 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp EEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred EEECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 999999887 999999999999988654 6677765
No 22
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.73 E-value=3.2e-18 Score=150.00 Aligned_cols=113 Identities=24% Similarity=0.352 Sum_probs=97.5
Q ss_pred CcCCeEEEEEEEeeccCccccC-CCCCCCcEEEEEECCee--cceeeeeeeCCCCCCeEceeEEEEeecC--CCCEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMD-IFGASDPYVQLSLSGER--IPAKKTSVKMKTLNPEWNEDFKLTVKDP--ETQVLQLH 331 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d-~~g~~dpyv~v~l~~~~--~~~~~T~~~~~t~nP~wne~f~~~v~~~--~~~~L~v~ 331 (505)
+....+.|.|+|++|+||+.++ ..|.+||||++++.+.. ..+++|+++++|+||.|||+|.|.+... ....|.|+
T Consensus 18 y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~ 97 (148)
T 3fdw_A 18 YEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFS 97 (148)
T ss_dssp EETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEE
Confidence 4556799999999999999988 57899999999997543 3357999999999999999999998653 24579999
Q ss_pred EEEcCCCCCCcccEEEEEECccCCCCCeeEEEEecccc
Q 038990 332 VYDWEKVGTHDKLGMQVVPLRSLTPNETKELTLDLVKN 369 (505)
Q Consensus 332 v~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~~ 369 (505)
|||+|..++|++||++.++|+++..+.....|++|...
T Consensus 98 V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 98 VWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp EEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred EEECCCCcCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 99999999999999999999999877777889988654
No 23
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.73 E-value=1.5e-17 Score=146.56 Aligned_cols=110 Identities=34% Similarity=0.523 Sum_probs=87.9
Q ss_pred cCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCee---cceeeeeeeCCCCCCeEceeEEEEeecCCCCEEEEEEEE
Q 038990 258 KKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGER---IPAKKTSVKMKTLNPEWNEDFKLTVKDPETQVLQLHVYD 334 (505)
Q Consensus 258 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~---~~~~~T~~~~~t~nP~wne~f~~~v~~~~~~~L~v~v~d 334 (505)
....|.|+|+|++|++|+.+|..|.+||||++++.+.. ...++|+++++++||.|||+|.|.+.. ....|.++|||
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~l~~~V~d 94 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHP-QQHRLLFEVFD 94 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECT-TTCEEEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecC-CCCEEEEEEEE
Confidence 45779999999999999999988999999999997421 235799999999999999999999975 45789999999
Q ss_pred cCCCCCCcccEEEEEECccCCCCCee------EEEEeccc
Q 038990 335 WEKVGTHDKLGMQVVPLRSLTPNETK------ELTLDLVK 368 (505)
Q Consensus 335 ~d~~~~d~~lG~~~i~l~~l~~~~~~------~~~l~l~~ 368 (505)
+|..++|++||++.+++.++..+... ..|++|..
T Consensus 95 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~ 134 (153)
T 3b7y_A 95 ENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHP 134 (153)
T ss_dssp CCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBC
T ss_pred CCCCcCCCeeEEEEEEHHHcccCCCccccccccccccccc
Confidence 99999999999999999999876532 46777654
No 24
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=5.5e-18 Score=148.31 Aligned_cols=112 Identities=27% Similarity=0.338 Sum_probs=94.0
Q ss_pred CcCCeEEEEEEEeeccCcccc-CC------CCCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeecC--CCCE
Q 038990 257 IKKPVGILHVKVIRAIRLLKM-DI------FGASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKDP--ETQV 327 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~-d~------~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~--~~~~ 327 (505)
+....+.|.|+|++|+||+.+ +. .+.+||||++++.+.....++|+++++++||+|||+|.|.+... ....
T Consensus 21 y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 100 (147)
T 2enp_A 21 YDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRT 100 (147)
T ss_dssp EETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSE
T ss_pred EcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCE
Confidence 455678999999999999984 43 35899999999976443457999999999999999999998532 2458
Q ss_pred EEEEEEEcCCCCCCcccEEEEEECccCCCCCeeEEEEeccc
Q 038990 328 LQLHVYDWEKVGTHDKLGMQVVPLRSLTPNETKELTLDLVK 368 (505)
Q Consensus 328 L~v~v~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~ 368 (505)
|.|+|||+|.+++|++||++.+++.++........|+.|..
T Consensus 101 L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 101 LLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp EEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred EEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 99999999999999999999999999987776677877754
No 25
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.73 E-value=2.1e-17 Score=142.50 Aligned_cols=113 Identities=22% Similarity=0.413 Sum_probs=98.2
Q ss_pred EEEEEeeecCCCCC---CCCCCEEEEEEcCeEEEeeccc-CCCCCccCceEEEEeeCCCCCCeEEEEEEEccCCccCCCC
Q 038990 388 GKATEYGAKDLEGK---HHNNPYAVVICRGEQKKTKMIK-KCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRGLRLRSK 463 (505)
Q Consensus 388 a~v~v~~a~~L~~~---~~~dpyv~v~~~~~~~kT~v~~-~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~~~~~~d 463 (505)
.+|+|++|++|+.. +.+||||++++++..++|++++ ++.||+|||+|.|.+.+. ...|.|+|||++. ++++
T Consensus 12 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~--~~~l~~~V~d~~~---~~~d 86 (136)
T 1wfj_A 12 LEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEG--TTELKAKIFDKDV---GTED 86 (136)
T ss_dssp EEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESS--CCEEEEEECCSSS---CTTT
T ss_pred EEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCC--CCEEEEEEEECCC---CCCC
Confidence 48999999999864 5799999999999999999999 899999999999999873 4689999999984 6789
Q ss_pred CccEEEEEecccccc-CCEEeEEEEeCCC--CCceEEEEEEEEeC
Q 038990 464 ESLGYVDINLHDVLH-NGRLKEKYHLINS--KNGAVQVEIKWKAI 505 (505)
Q Consensus 464 ~~lG~~~i~L~~l~~-~~~~~~~~~L~~~--~~G~i~l~~~~~~~ 505 (505)
++||++.++|.++.. +.....||+|... ..|+|+|+++|.|.
T Consensus 87 ~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 87 DAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPS 131 (136)
T ss_dssp CCSEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEEC
T ss_pred ceEEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEEEeC
Confidence 999999999999955 4456789999632 37999999999983
No 26
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.72 E-value=1.6e-17 Score=149.18 Aligned_cols=109 Identities=27% Similarity=0.335 Sum_probs=94.9
Q ss_pred CeEEEEEEEeeccCccccCC-CCCCCcEEEEEECCe--ecceeeeeeeCCCCCCeEceeEEEEeecCCCCEEEEEEE-Ec
Q 038990 260 PVGILHVKVIRAIRLLKMDI-FGASDPYVQLSLSGE--RIPAKKTSVKMKTLNPEWNEDFKLTVKDPETQVLQLHVY-DW 335 (505)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~-~g~~dpyv~v~l~~~--~~~~~~T~~~~~t~nP~wne~f~~~v~~~~~~~L~v~v~-d~ 335 (505)
..|.|.|+|++|+||+.+|. .|.+||||++++.+. ....++|+++++|+||+|||+|.|.+.. ....|.|+|| |+
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~L~~~V~~d~ 106 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESP-QGKVLQVIVWGDY 106 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCC-TTEEEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecC-CCCEEEEEEEEcC
Confidence 56899999999999999985 689999999998653 2235799999999999999999999853 5688999999 99
Q ss_pred CCCCCCcccEEEEEECccCCCCCeeEEEEecccc
Q 038990 336 EKVGTHDKLGMQVVPLRSLTPNETKELTLDLVKN 369 (505)
Q Consensus 336 d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~~ 369 (505)
|.+++|++||++.++++++..+.....|++|...
T Consensus 107 d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 107 GRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp STTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9999999999999999999988888899998764
No 27
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=1.8e-17 Score=145.36 Aligned_cols=108 Identities=31% Similarity=0.496 Sum_probs=93.5
Q ss_pred CeEEEEEEEeeccCccccCCCCCCCcEEEEEECCee--cceeeeeeeCCCCCCeEceeEEEEeecCC-CCEEEEEEEEcC
Q 038990 260 PVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGER--IPAKKTSVKMKTLNPEWNEDFKLTVKDPE-TQVLQLHVYDWE 336 (505)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~--~~~~~T~~~~~t~nP~wne~f~~~v~~~~-~~~L~v~v~d~d 336 (505)
..+.|.|+|++|++|+.++..+.+||||++++.+.. ...++|+++++++||.|||+|.|.+.... ...|.|+|||+|
T Consensus 29 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 108 (149)
T 1a25_A 29 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 108 (149)
T ss_dssp SSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECC
Confidence 357899999999999999988999999999997532 23579999999999999999999996532 468999999999
Q ss_pred CCCCCcccEEEEEECccCCCCCeeEEEEeccc
Q 038990 337 KVGTHDKLGMQVVPLRSLTPNETKELTLDLVK 368 (505)
Q Consensus 337 ~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~ 368 (505)
..++|++||++.+++.++..+ ....|++|..
T Consensus 109 ~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 109 LTSRNDFMGSLSFGISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp SSSCCEEEEEEEEEHHHHTTC-CEEEEEECBC
T ss_pred CCCCCCEEEEEEEEHHHhCcC-ccCCeEEccC
Confidence 999999999999999999876 4677888864
No 28
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.72 E-value=2.8e-18 Score=149.19 Aligned_cols=108 Identities=27% Similarity=0.421 Sum_probs=93.2
Q ss_pred eEEEEEEEeeccCccccCCCCCCCcEEEEEECCeec-----------ceeeeeeeCCCCCCeEceeEEEE-eec--CCCC
Q 038990 261 VGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERI-----------PAKKTSVKMKTLNPEWNEDFKLT-VKD--PETQ 326 (505)
Q Consensus 261 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~-----------~~~~T~~~~~t~nP~wne~f~~~-v~~--~~~~ 326 (505)
.|.|.|+|++|++|+.+|..|.+||||++++.+... ..++|+++++|+||.|||+|.|. +.. ....
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 589999999999999999999999999999987431 24689999999999999999997 532 2467
Q ss_pred EEEEEEEEcCCCCCCcccEEEEEECccCCCCCeeEEEEeccc
Q 038990 327 VLQLHVYDWEKVGTHDKLGMQVVPLRSLTPNETKELTLDLVK 368 (505)
Q Consensus 327 ~L~v~v~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~ 368 (505)
.|.++|||+|..++|++||++.++++++..+.....|++|..
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 899999999999999999999999999887666678888764
No 29
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=8.8e-18 Score=146.08 Aligned_cols=112 Identities=28% Similarity=0.328 Sum_probs=93.5
Q ss_pred CcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCee--cceeeeeeeCCCCCCeEceeEEEEeecC--CCCEEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGER--IPAKKTSVKMKTLNPEWNEDFKLTVKDP--ETQVLQLHV 332 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~--~~~~~T~~~~~t~nP~wne~f~~~v~~~--~~~~L~v~v 332 (505)
+....+.|.|+|++|+||+.++..| +||||++++.+.. ...++|+++++|+||+|||+|.|.+... ....|.|+|
T Consensus 19 y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 97 (142)
T 2dmg_A 19 HSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAV 97 (142)
T ss_dssp EETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEE
Confidence 4456789999999999999999888 9999999996432 2457999999999999999999998532 245899999
Q ss_pred EEcCCCCC--CcccEEEEEECccCCCCCeeEEEEecccc
Q 038990 333 YDWEKVGT--HDKLGMQVVPLRSLTPNETKELTLDLVKN 369 (505)
Q Consensus 333 ~d~d~~~~--d~~lG~~~i~l~~l~~~~~~~~~l~l~~~ 369 (505)
||++.+++ |++||++.+++.++..+.....|++|...
T Consensus 98 ~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 98 KNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp EECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred EECCCccccCCcEEEEEEEecccccccccccceeeccCC
Confidence 99998763 57999999999999877677778877653
No 30
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.72 E-value=1.4e-17 Score=143.78 Aligned_cols=108 Identities=31% Similarity=0.500 Sum_probs=93.3
Q ss_pred CeEEEEEEEeeccCccccCCCCCCCcEEEEEECCe--ecceeeeeeeCCCCCCeEceeEEEEeecCC-CCEEEEEEEEcC
Q 038990 260 PVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGE--RIPAKKTSVKMKTLNPEWNEDFKLTVKDPE-TQVLQLHVYDWE 336 (505)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~~~~~t~nP~wne~f~~~v~~~~-~~~L~v~v~d~d 336 (505)
..|.|.|+|++|++|+.++..|.+||||++++.+. ....++|++++++.||.|||+|.|.+.... ...|.++|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 45899999999999999998899999999999542 233579999999999999999999986532 358999999999
Q ss_pred CCCCCcccEEEEEECccCCCCCeeEEEEeccc
Q 038990 337 KVGTHDKLGMQVVPLRSLTPNETKELTLDLVK 368 (505)
Q Consensus 337 ~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~ 368 (505)
..++|++||++.++++++..+. ...|++|..
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~ 124 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKMP-ASGWYKLLN 124 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHSC-EEEEEECBC
T ss_pred CCCCCceEEEEEEeHHHhccCc-cCceEECcC
Confidence 9999999999999999997665 678888864
No 31
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.72 E-value=2.4e-17 Score=141.41 Aligned_cols=106 Identities=25% Similarity=0.432 Sum_probs=88.3
Q ss_pred CeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeecCCCCEEEEEEEEcCCCC
Q 038990 260 PVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKDPETQVLQLHVYDWEKVG 339 (505)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~~~~~L~v~v~d~d~~~ 339 (505)
....|+|+|++|++|+++|..|.+||||++++++.. ..++|+++++|+||.|||+|.|.+... +.|.++|||+|..+
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~-~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~~ 79 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSG-QCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKIH 79 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTC-CEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGTT
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCC-ceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCCC
Confidence 457899999999999999999999999999997632 347999999999999999999999764 34999999999887
Q ss_pred C---CcccEEEEEECccCC-CCCeeEEEEeccc
Q 038990 340 T---HDKLGMQVVPLRSLT-PNETKELTLDLVK 368 (505)
Q Consensus 340 ~---d~~lG~~~i~l~~l~-~~~~~~~~l~l~~ 368 (505)
+ |++||++.++++++. .......+++|..
T Consensus 80 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~ 112 (132)
T 3pyc_A 80 KKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK 112 (132)
T ss_dssp SSTTTTEEEEEEECHHHHHHHTTSCCEEEECBC
T ss_pred CCCCCCceEEEEEeHHHhhcccccCcEEEeeee
Confidence 6 899999999998872 2233345666654
No 32
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.71 E-value=1.7e-16 Score=138.92 Aligned_cols=112 Identities=25% Similarity=0.455 Sum_probs=95.4
Q ss_pred EEEEEeeecCCCCC---CCCCCEEEEEEcCeEEEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEEEccCC-------
Q 038990 388 GKATEYGAKDLEGK---HHNNPYAVVICRGEQKKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRG------- 457 (505)
Q Consensus 388 a~v~v~~a~~L~~~---~~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~------- 457 (505)
..|+|++|++|+.. +.+||||++++++..++|++++++.||+|||+|.|.+..+ .+.|.++|||++..
T Consensus 19 L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~--~~~l~~~v~d~d~~~~~~~~~ 96 (148)
T 3kwu_A 19 ISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNS--SDRIKVRVLDEDDDIKSRVKQ 96 (148)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECST--TCEEEEEEEECCCSHHHHHHT
T ss_pred EEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCC--CCEEEEEEEECCCCccccccc
Confidence 48999999999864 5899999999999999999999999999999999999875 36899999999840
Q ss_pred -ccCCCCCccEEEEEeccccccCCEEeEEEEeCCC-----CCceEEEEEEEE
Q 038990 458 -LRLRSKESLGYVDINLHDVLHNGRLKEKYHLINS-----KNGAVQVEIKWK 503 (505)
Q Consensus 458 -~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~-----~~G~i~l~~~~~ 503 (505)
...+.+++||++.++|+++ .....+||+|... ..|+|+|+++|.
T Consensus 97 ~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 97 RFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp TTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 0016799999999999998 3456899999843 369999999985
No 33
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.71 E-value=4.3e-17 Score=140.01 Aligned_cols=111 Identities=20% Similarity=0.334 Sum_probs=96.7
Q ss_pred eEEEEEeeecCCCCC---CCCCCEEEEEEcCeEEEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEEEccCCccCCCC
Q 038990 387 VGKATEYGAKDLEGK---HHNNPYAVVICRGEQKKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRGLRLRSK 463 (505)
Q Consensus 387 ~a~v~v~~a~~L~~~---~~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~~~~~~d 463 (505)
...|+|++|++|+.. +.+||||+++++++.++|++++++.||+|||+|.|.+.+. .+.|.|+|||++. .+++
T Consensus 14 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~--~~~l~i~V~d~d~---~~~~ 88 (133)
T 2ep6_A 14 ILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDI--HDVLEVTVFDEDG---DKPP 88 (133)
T ss_dssp EEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCT--TCEEEEEEEEEET---TEEE
T ss_pred EEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCC--CCEEEEEEEECCC---CCCC
Confidence 348999999999864 5899999999999999999999999999999999999864 4689999999984 6678
Q ss_pred CccEEEEEeccccccCCEEeEEEEeCCC-----CCceEEEEEEEEe
Q 038990 464 ESLGYVDINLHDVLHNGRLKEKYHLINS-----KNGAVQVEIKWKA 504 (505)
Q Consensus 464 ~~lG~~~i~L~~l~~~~~~~~~~~L~~~-----~~G~i~l~~~~~~ 504 (505)
++||++.++|.++..+. .+||+|.+. ..|+|+|+++|..
T Consensus 89 ~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 89 DFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQAFKGVIYLEMDLIY 132 (133)
T ss_dssp EECCBCEEEGGGCCSSC--CEECCCBCSCTTSCCSSEEEEEEEEEE
T ss_pred CeeEEEEEEHHHccCCC--ceEEEeecCCCCCccceEEEEEEEEEe
Confidence 99999999999997654 589999753 4799999999853
No 34
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.71 E-value=2.2e-17 Score=143.28 Aligned_cols=112 Identities=21% Similarity=0.326 Sum_probs=94.2
Q ss_pred CcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCee--cceeeeeeeCCCCCCeEceeEEEEeec---CCCCEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGER--IPAKKTSVKMKTLNPEWNEDFKLTVKD---PETQVLQLH 331 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~--~~~~~T~~~~~t~nP~wne~f~~~v~~---~~~~~L~v~ 331 (505)
+....+.|.|+|++|++|+.++..|.+||||++++.+.. ...++|+++++|+||+|||+|.|.+.. .....|.|+
T Consensus 16 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 95 (141)
T 1v27_A 16 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 95 (141)
T ss_dssp EETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEE
T ss_pred EeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEE
Confidence 445668999999999999999999999999999985422 335799999999999999999999532 235789999
Q ss_pred EEEcCCCCC--CcccEEEEEECccCCCCCeeEEEEecccc
Q 038990 332 VYDWEKVGT--HDKLGMQVVPLRSLTPNETKELTLDLVKN 369 (505)
Q Consensus 332 v~d~d~~~~--d~~lG~~~i~l~~l~~~~~~~~~l~l~~~ 369 (505)
|||++..++ |++||++.+++.++.... ...|++|...
T Consensus 96 V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~ 134 (141)
T 1v27_A 96 LWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTH 134 (141)
T ss_dssp EEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCC
T ss_pred EEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECccc
Confidence 999999887 999999999999987654 6788888654
No 35
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.71 E-value=8.3e-17 Score=141.73 Aligned_cols=112 Identities=24% Similarity=0.371 Sum_probs=93.4
Q ss_pred EEEEEeeecCCCCC---CCCCCEEEEEEcC------eEEEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEEEccCCc
Q 038990 388 GKATEYGAKDLEGK---HHNNPYAVVICRG------EQKKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRGL 458 (505)
Q Consensus 388 a~v~v~~a~~L~~~---~~~dpyv~v~~~~------~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~~ 458 (505)
.+|+|++|++|+.. +.+||||++++.+ ..++|++++++.||+|||+|.|.+... ...|.|+|||++.
T Consensus 22 L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~l~~~V~d~d~-- 97 (153)
T 3b7y_A 22 VRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQ--QHRLLFEVFDENR-- 97 (153)
T ss_dssp EEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTT--TCEEEEEEEECCS--
T ss_pred EEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCC--CCEEEEEEEECCC--
Confidence 48999999999863 5899999999974 456999999999999999999999764 4689999999984
Q ss_pred cCCCCCccEEEEEeccccccCCE------EeEEEEeCCC-----CCceEEEEEEEEe
Q 038990 459 RLRSKESLGYVDINLHDVLHNGR------LKEKYHLINS-----KNGAVQVEIKWKA 504 (505)
Q Consensus 459 ~~~~d~~lG~~~i~L~~l~~~~~------~~~~~~L~~~-----~~G~i~l~~~~~~ 504 (505)
++++++||++.++|+++..+.. ..+||+|... ..|+|+|+++|.|
T Consensus 98 -~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 98 -LTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp -SSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred -CcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 6789999999999999987542 1589999643 3799999999987
No 36
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.71 E-value=1.1e-16 Score=137.99 Aligned_cols=109 Identities=22% Similarity=0.324 Sum_probs=94.8
Q ss_pred EEEEEeeecCCCCCC--------------CCCCEEEEEEcCeE-EEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEE
Q 038990 388 GKATEYGAKDLEGKH--------------HNNPYAVVICRGEQ-KKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVK 452 (505)
Q Consensus 388 a~v~v~~a~~L~~~~--------------~~dpyv~v~~~~~~-~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~ 452 (505)
.+|+|++|++|+..+ .+||||++++++.. .+|+++++|.||+|||+|+|.+.+. +.|.|+||
T Consensus 8 L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~---~~L~~~V~ 84 (136)
T 1gmi_A 8 LKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG---RKIELAVF 84 (136)
T ss_dssp EEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE---CEEEEEEE
T ss_pred EEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC---CEEEEEEE
Confidence 479999999998532 29999999998766 5999999999999999999999764 68999999
Q ss_pred EccCCccCCCCCccEEEEEeccccccCC--EEeEEEEeCCCCCceEEEEEEEEe
Q 038990 453 SKRRGLRLRSKESLGYVDINLHDVLHNG--RLKEKYHLINSKNGAVQVEIKWKA 504 (505)
Q Consensus 453 d~~~~~~~~~d~~lG~~~i~L~~l~~~~--~~~~~~~L~~~~~G~i~l~~~~~~ 504 (505)
|++. .+++++||++.++|+++..+. ..+.||+|.. +|+|+|+++|.+
T Consensus 85 d~d~---~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--~G~i~l~l~~~~ 133 (136)
T 1gmi_A 85 HDAP---IGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP--EGKVYVIIDLSG 133 (136)
T ss_dssp ECCS---SSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--SCEEEEEEEEEE
T ss_pred eCCC---CCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC--CeEEEEEEEEEe
Confidence 9984 678999999999999998753 4589999974 899999999975
No 37
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.71 E-value=9.3e-17 Score=144.91 Aligned_cols=110 Identities=34% Similarity=0.532 Sum_probs=86.0
Q ss_pred cCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCee---cceeeeeeeCCCCCCeEceeEEEEeecCCCCEEEEEEEE
Q 038990 258 KKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGER---IPAKKTSVKMKTLNPEWNEDFKLTVKDPETQVLQLHVYD 334 (505)
Q Consensus 258 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~---~~~~~T~~~~~t~nP~wne~f~~~v~~~~~~~L~v~v~d 334 (505)
....|.|+|+|++|++|+.++..|.+||||++++++.. ...++|+++++++||.|||+|.|.+.. ....|.|+|||
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~-~~~~L~~~V~d 82 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP-QRHRILFEVFD 82 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT-TTCEEEEEEEE
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC-CCCEEEEEEEE
Confidence 34679999999999999999988999999999997522 134699999999999999999999974 45789999999
Q ss_pred cCCCCCCcccEEEEEECccCCCCCee-E-----EEEeccc
Q 038990 335 WEKVGTHDKLGMQVVPLRSLTPNETK-E-----LTLDLVK 368 (505)
Q Consensus 335 ~d~~~~d~~lG~~~i~l~~l~~~~~~-~-----~~l~l~~ 368 (505)
++.+++|++||++.++|.++..+... + .|+.|..
T Consensus 83 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~ 122 (176)
T 3m7f_B 83 ENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHP 122 (176)
T ss_dssp CC----CEEEEEEEEESCSCCBC------CCCCEEEECBC
T ss_pred CCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccc
Confidence 99999999999999999999876443 1 5777654
No 38
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.71 E-value=3.2e-17 Score=144.45 Aligned_cols=112 Identities=22% Similarity=0.348 Sum_probs=94.3
Q ss_pred CcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCe--ecceeeeeeeCCCCCCeEceeEEEEeecC-CCCEEEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGE--RIPAKKTSVKMKTLNPEWNEDFKLTVKDP-ETQVLQLHVY 333 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~~~~~t~nP~wne~f~~~v~~~-~~~~L~v~v~ 333 (505)
+....|.|.|+|++|++|+..+ .|.+||||++++.+. ...+++|+++++|+||.|||+|.|.+... ....|.|+||
T Consensus 22 y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~ 100 (153)
T 3fbk_A 22 IDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVW 100 (153)
T ss_dssp EEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEE
Confidence 5567899999999999999999 689999999999543 23457999999999999999999998422 2356999999
Q ss_pred EcCCCCC-CcccEEEEEECccCCC-CCeeEEEEecccc
Q 038990 334 DWEKVGT-HDKLGMQVVPLRSLTP-NETKELTLDLVKN 369 (505)
Q Consensus 334 d~d~~~~-d~~lG~~~i~l~~l~~-~~~~~~~l~l~~~ 369 (505)
|+|..++ |++||++.+++.++.. +.....|++|...
T Consensus 101 d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~ 138 (153)
T 3fbk_A 101 NRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGE 138 (153)
T ss_dssp ECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCT
T ss_pred eCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCCh
Confidence 9998877 9999999999999985 6677889988653
No 39
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.70 E-value=8.1e-17 Score=142.79 Aligned_cols=112 Identities=34% Similarity=0.491 Sum_probs=93.6
Q ss_pred CcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECC--eecceeeeeeeCCCCCCeEceeEEEEeecC--CCCEEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSG--ERIPAKKTSVKMKTLNPEWNEDFKLTVKDP--ETQVLQLHV 332 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~--~~~~~~~T~~~~~t~nP~wne~f~~~v~~~--~~~~L~v~v 332 (505)
+....|.|.|+|++|+||+.+|..|.+||||++++.+ .....++|+++++++||.|||+|.|.+... ....|.|+|
T Consensus 20 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V 99 (159)
T 1tjx_A 20 YVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 99 (159)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEE
Confidence 4456789999999999999999889999999999964 233457999999999999999999998643 246799999
Q ss_pred EEcCCCCCCcccEEEEEECccC------------CCCCeeEEEEeccc
Q 038990 333 YDWEKVGTHDKLGMQVVPLRSL------------TPNETKELTLDLVK 368 (505)
Q Consensus 333 ~d~d~~~~d~~lG~~~i~l~~l------------~~~~~~~~~l~l~~ 368 (505)
||+|.+++|++||++.+++..+ ..+.....|+.|..
T Consensus 100 ~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 100 LDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp EECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred EECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 9999999999999999999854 23445667887754
No 40
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.69 E-value=8.7e-17 Score=138.90 Aligned_cols=99 Identities=31% Similarity=0.466 Sum_probs=85.6
Q ss_pred CcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCe--ecceeeeeeeCCCCCCeEceeEEEEeecCC--CCEEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGE--RIPAKKTSVKMKTLNPEWNEDFKLTVKDPE--TQVLQLHV 332 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~~~~~t~nP~wne~f~~~v~~~~--~~~L~v~v 332 (505)
+....|.|.|+|++|++|+..+..|.+||||++++.+. ...+++|++++++.||.|||+|.|.+.... ...|.++|
T Consensus 11 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V 90 (138)
T 3n5a_A 11 YNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITV 90 (138)
T ss_dssp EETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEE
T ss_pred EcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEE
Confidence 34567899999999999999998899999999999643 234578999999999999999999986432 36899999
Q ss_pred EEcCCCCCCcccEEEEEECccCC
Q 038990 333 YDWEKVGTHDKLGMQVVPLRSLT 355 (505)
Q Consensus 333 ~d~d~~~~d~~lG~~~i~l~~l~ 355 (505)
||+|..++|++||++.++++++.
T Consensus 91 ~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 91 MDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp EECCSSSCCEEEEEEEESSSSCH
T ss_pred EECCCCCCCcEEEEEEEccccCC
Confidence 99999999999999999998753
No 41
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.69 E-value=1.5e-16 Score=142.06 Aligned_cols=98 Identities=34% Similarity=0.507 Sum_probs=86.1
Q ss_pred CcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCee--cceeeeeeeCCCCCCeEceeEEEEeecC--CCCEEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGER--IPAKKTSVKMKTLNPEWNEDFKLTVKDP--ETQVLQLHV 332 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~--~~~~~T~~~~~t~nP~wne~f~~~v~~~--~~~~L~v~v 332 (505)
+....+.|.|+|++|++|+.++..|.+||||++++.+.. ...++|+++++|+||+|||+|.|.+... ....|.|+|
T Consensus 32 y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 111 (166)
T 2cm5_A 32 YSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISV 111 (166)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEE
Confidence 455679999999999999999988999999999997632 3457999999999999999999998643 256899999
Q ss_pred EEcCCCCCCcccEEEEEECccC
Q 038990 333 YDWEKVGTHDKLGMQVVPLRSL 354 (505)
Q Consensus 333 ~d~d~~~~d~~lG~~~i~l~~l 354 (505)
||+|..++|++||++.+++.++
T Consensus 112 ~d~d~~~~~~~iG~~~i~l~~~ 133 (166)
T 2cm5_A 112 WDYDIGKSNDYIGGCQLGISAK 133 (166)
T ss_dssp EECCSSSCCEEEEEEEEETTCC
T ss_pred EECCCCCCCcEEEeEEEecccC
Confidence 9999999999999999999975
No 42
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.68 E-value=1.1e-16 Score=141.08 Aligned_cols=97 Identities=32% Similarity=0.405 Sum_probs=79.5
Q ss_pred CcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEEC--CeecceeeeeeeCCCCCCeEceeEEEEeecCC--CCEEEEEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLS--GERIPAKKTSVKMKTLNPEWNEDFKLTVKDPE--TQVLQLHV 332 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~--~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~~--~~~L~v~v 332 (505)
+....+.|.|+|++|+||+.++..|.+||||++++. +....+++|+++++++||+|||+|.|.+.... ...|.|+|
T Consensus 25 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V 104 (153)
T 1w15_A 25 YQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLV 104 (153)
T ss_dssp EETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEE
T ss_pred EcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEE
Confidence 445678999999999999999988999999999994 33334579999999999999999999986542 46899999
Q ss_pred EEcCCCCCCcccEEEEEECcc
Q 038990 333 YDWEKVGTHDKLGMQVVPLRS 353 (505)
Q Consensus 333 ~d~d~~~~d~~lG~~~i~l~~ 353 (505)
||+|.+++|++||++.+++++
T Consensus 105 ~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 105 LDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EECCTTSCCEEEEEEEESTTC
T ss_pred EeCCCCCCCcEEEEEEECCCC
Confidence 999999999999999999988
No 43
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.67 E-value=1.1e-16 Score=143.51 Aligned_cols=106 Identities=21% Similarity=0.320 Sum_probs=87.5
Q ss_pred CCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeecCCCCEEEEEEEEcCCC
Q 038990 259 KPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKDPETQVLQLHVYDWEKV 338 (505)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~~~~~L~v~v~d~d~~ 338 (505)
...+.|+|+|++|++|+..+..+.+||||++++++. .++|+++++|+||+|||+|.|.+.. .+.|.|+|||+|.+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~---~~kT~v~~~tlnP~Wne~f~f~v~~--~~~L~~~V~D~d~~ 107 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQ---SKKTEKCNNTNSPKWKQPLTVIVTP--VSKLHFRVWSHQTL 107 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTE---EEECCCCSSCSSCEEEEEEEEEECT--TCEEEEEEEECCSS
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCE---EeEccccCCCCCCeECCEEEEEeCC--CCEEEEEEEECCCC
Confidence 357899999999999994444455999999999873 3699999999999999999999843 78899999999999
Q ss_pred CCCcccEEEEEECccCCCCC-----eeEEEEecccc
Q 038990 339 GTHDKLGMQVVPLRSLTPNE-----TKELTLDLVKN 369 (505)
Q Consensus 339 ~~d~~lG~~~i~l~~l~~~~-----~~~~~l~l~~~ 369 (505)
++|++||++.+++.++..+. ....|++|...
T Consensus 108 ~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~ 143 (173)
T 2nq3_A 108 KSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGD 143 (173)
T ss_dssp SCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEES
T ss_pred CCCceEEEEEEEHHHhcccCCCCcceeEEEEECccC
Confidence 99999999999999886432 12567777653
No 44
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.66 E-value=2.7e-16 Score=135.19 Aligned_cols=104 Identities=23% Similarity=0.329 Sum_probs=86.3
Q ss_pred eEEEEEeeecCCCC--CCCCCCEEEEEE-----cCeEEEeecccCCCCCccCceEEEE-eeCCC-CCCeEEEEEEEccCC
Q 038990 387 VGKATEYGAKDLEG--KHHNNPYAVVIC-----RGEQKKTKMIKKCRDPIWNEEFQFD-FEEAP-LKEKIHIEVKSKRRG 457 (505)
Q Consensus 387 ~a~v~v~~a~~L~~--~~~~dpyv~v~~-----~~~~~kT~v~~~t~nP~wne~f~f~-v~~~~-~~~~l~i~V~d~~~~ 457 (505)
...|+|.+|++|+. .+.+||||++++ ....++|+++++|.||+|||+|.|. +.... ....|.|+|||++.
T Consensus 21 ~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d~- 99 (134)
T 2b3r_A 21 TLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAES- 99 (134)
T ss_dssp EEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECCS-
T ss_pred EEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECCC-
Confidence 34899999999986 358999999999 3456799999999999999999999 75322 23589999999984
Q ss_pred ccCCCCCccEEEEEeccccccCCEEeEEEEeCCCCC
Q 038990 458 LRLRSKESLGYVDINLHDVLHNGRLKEKYHLINSKN 493 (505)
Q Consensus 458 ~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~~ 493 (505)
++++++||++.++|+++..+....+||+|.+.+.
T Consensus 100 --~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 133 (134)
T 2b3r_A 100 --LRENFFLGGITLPLKDFNLSKETVKWYQLTAATY 133 (134)
T ss_dssp --SSCCEEEEEEEEEGGGSCTTSCEEEEEECBC---
T ss_pred --CCCCcEEEEEEEEhhhccCCCCcceeEECCCccC
Confidence 6788999999999999988777899999987544
No 45
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.66 E-value=5.6e-16 Score=139.77 Aligned_cols=113 Identities=26% Similarity=0.387 Sum_probs=91.2
Q ss_pred eEEEEEeeecCCCCC---CCCCCEEEEEEcC------eEEEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEEEccCC
Q 038990 387 VGKATEYGAKDLEGK---HHNNPYAVVICRG------EQKKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRG 457 (505)
Q Consensus 387 ~a~v~v~~a~~L~~~---~~~dpyv~v~~~~------~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~ 457 (505)
...|+|++|++|+.. +.+||||++++.+ ..++|++++++.||+|||.|.|.+... ...|.|+|||++.
T Consensus 9 ~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~--~~~L~~~V~d~d~- 85 (176)
T 3m7f_B 9 VVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQ--RHRILFEVFDENR- 85 (176)
T ss_dssp EEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTT--TCEEEEEEEECC--
T ss_pred EEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCC--CCEEEEEEEECCC-
Confidence 358999999999763 5899999999975 457999999999999999999999754 3689999999984
Q ss_pred ccCCCCCccEEEEEeccccccCCEE-e-----EEEEeCCC-----CCceEEEEEEEEe
Q 038990 458 LRLRSKESLGYVDINLHDVLHNGRL-K-----EKYHLINS-----KNGAVQVEIKWKA 504 (505)
Q Consensus 458 ~~~~~d~~lG~~~i~L~~l~~~~~~-~-----~~~~L~~~-----~~G~i~l~~~~~~ 504 (505)
++.+++||++.++|.++...... . +||+|... ..|+|+|++.|.|
T Consensus 86 --~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p 141 (176)
T 3m7f_B 86 --LTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 141 (176)
T ss_dssp -----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred --CCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEe
Confidence 67899999999999999876432 2 79999753 2799999999987
No 46
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.66 E-value=6.3e-16 Score=132.50 Aligned_cols=110 Identities=21% Similarity=0.376 Sum_probs=91.7
Q ss_pred EEEEEeeecCCCCC---CCCCCEEEEEEcC--eEEEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEEEccCCccCCC
Q 038990 388 GKATEYGAKDLEGK---HHNNPYAVVICRG--EQKKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRGLRLRS 462 (505)
Q Consensus 388 a~v~v~~a~~L~~~---~~~dpyv~v~~~~--~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~~~~~~ 462 (505)
.+|+|++|++|+.. +.+||||++++++ ..++|+++++|.||+|||+|.|.+.+. +.|.|+|||++. +++
T Consensus 7 L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~---~~l~~~v~d~d~---~~~ 80 (132)
T 3pyc_A 7 IRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT---DSITISVWNHKK---IHK 80 (132)
T ss_dssp EEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT---CCEEEEEEEGGG---TTS
T ss_pred EEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC---CEEEEEEEECCC---CCC
Confidence 37999999999763 5799999999975 667999999999999999999999775 359999999984 443
Q ss_pred ---CCccEEEEEecccccc-CCEEeEEEEeCCC-------CCceEEEEEEEE
Q 038990 463 ---KESLGYVDINLHDVLH-NGRLKEKYHLINS-------KNGAVQVEIKWK 503 (505)
Q Consensus 463 ---d~~lG~~~i~L~~l~~-~~~~~~~~~L~~~-------~~G~i~l~~~~~ 503 (505)
|++||++.++++++.. .....+|++|... ..|+|++++.++
T Consensus 81 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~r 132 (132)
T 3pyc_A 81 KQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQTR 132 (132)
T ss_dssp STTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEEC
T ss_pred CCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEcC
Confidence 7999999999998844 3344688999754 279999999874
No 47
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.64 E-value=1.8e-16 Score=138.94 Aligned_cols=105 Identities=20% Similarity=0.350 Sum_probs=89.7
Q ss_pred EEEEEeeecCCCCC---CCCCCEEEEEEcC-----eEEEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEEEccCCcc
Q 038990 388 GKATEYGAKDLEGK---HHNNPYAVVICRG-----EQKKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRGLR 459 (505)
Q Consensus 388 a~v~v~~a~~L~~~---~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~~~ 459 (505)
..|+|++|++|+.. +.+||||++++.+ ..++|++++++.||+|||+|.|.+........|.|+|||++.
T Consensus 33 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~--- 109 (149)
T 1a25_A 33 LIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL--- 109 (149)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS---
T ss_pred EEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC---
Confidence 48999999999864 5789999999973 467999999999999999999999765444689999999984
Q ss_pred CCCCCccEEEEEeccccccCCEEeEEEEeCCCCCceE
Q 038990 460 LRSKESLGYVDINLHDVLHNGRLKEKYHLINSKNGAV 496 (505)
Q Consensus 460 ~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~~G~i 496 (505)
++++++||++.++|.++..+ ..++||+|.+...|++
T Consensus 110 ~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~~g~~ 145 (149)
T 1a25_A 110 TSRNDFMGSLSFGISELQKA-GVDGWFKLLSQEEGEY 145 (149)
T ss_dssp SSCCEEEEEEEEEHHHHTTC-CEEEEEECBCHHHHTT
T ss_pred CCCCCEEEEEEEEHHHhCcC-ccCCeEEccCCCCCcc
Confidence 67899999999999999876 4689999987666654
No 48
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.64 E-value=3e-16 Score=135.35 Aligned_cols=105 Identities=22% Similarity=0.395 Sum_probs=89.6
Q ss_pred eEEEEEeeecCCCCC---CCCCCEEEEEE-----cCeEEEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEEEccCCc
Q 038990 387 VGKATEYGAKDLEGK---HHNNPYAVVIC-----RGEQKKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRGL 458 (505)
Q Consensus 387 ~a~v~v~~a~~L~~~---~~~dpyv~v~~-----~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~~ 458 (505)
...|+|.+|++|+.. +.+||||++++ +...++|++++++.||+|||+|.|.+........|.|+|||++.
T Consensus 17 ~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~-- 94 (137)
T 3rdl_A 17 KLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR-- 94 (137)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS--
T ss_pred EEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC--
Confidence 348999999999863 58999999999 44567999999999999999999999765444589999999984
Q ss_pred cCCCCCccEEEEEeccccccCCEEeEEEEeCCCCCce
Q 038990 459 RLRSKESLGYVDINLHDVLHNGRLKEKYHLINSKNGA 495 (505)
Q Consensus 459 ~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~~G~ 495 (505)
.+++++||++.++|+++..+. ..+||+|.+...|+
T Consensus 95 -~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~~g~ 129 (137)
T 3rdl_A 95 -TTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQEEGE 129 (137)
T ss_dssp -SSCCEEEEEEEEEHHHHHHSC-EEEEEECBCHHHHT
T ss_pred -CCCCceEEEEEEeHHHhccCc-cCceEECcCccccc
Confidence 678999999999999998766 68999998765554
No 49
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.63 E-value=9.4e-16 Score=137.51 Aligned_cols=112 Identities=22% Similarity=0.310 Sum_probs=94.9
Q ss_pred EEEEEeeecCCC-CC--CCCCCEEEEEEcCeEEEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEEEccCCccCCCCC
Q 038990 388 GKATEYGAKDLE-GK--HHNNPYAVVICRGEQKKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRGLRLRSKE 464 (505)
Q Consensus 388 a~v~v~~a~~L~-~~--~~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~~~~~~d~ 464 (505)
.+|+|.+|++|+ .. +.+||||++++++..++|++++++.||+|||+|.|.+.. .+.|.|+|||++. ++.++
T Consensus 38 L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~---~~~L~~~V~D~d~---~~~dd 111 (173)
T 2nq3_A 38 LQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTP---VSKLHFRVWSHQT---LKSDV 111 (173)
T ss_dssp EEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECT---TCEEEEEEEECCS---SSCCE
T ss_pred EEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCC---CCEEEEEEEECCC---CCCCc
Confidence 489999999998 32 359999999999988899999999999999999999843 4689999999984 67899
Q ss_pred ccEEEEEeccccccCC-----EEeEEEEeCCC-----CCceEEEEEEEEeC
Q 038990 465 SLGYVDINLHDVLHNG-----RLKEKYHLINS-----KNGAVQVEIKWKAI 505 (505)
Q Consensus 465 ~lG~~~i~L~~l~~~~-----~~~~~~~L~~~-----~~G~i~l~~~~~~~ 505 (505)
+||++.++|.++..+. ....|++|... ..|+|.+.+.+.++
T Consensus 112 ~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~ 162 (173)
T 2nq3_A 112 LLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQL 162 (173)
T ss_dssp EEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEEC
T ss_pred eEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeec
Confidence 9999999999987632 23579999753 26999999998764
No 50
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.63 E-value=2e-15 Score=130.35 Aligned_cols=103 Identities=14% Similarity=0.109 Sum_probs=86.4
Q ss_pred eEEEEEeeecCCCCCCCCCCEEEEEEcC----eEEEeecccCCCCCccCceEEEEeeCCCC-CCeEEEEEEEccCCccCC
Q 038990 387 VGKATEYGAKDLEGKHHNNPYAVVICRG----EQKKTKMIKKCRDPIWNEEFQFDFEEAPL-KEKIHIEVKSKRRGLRLR 461 (505)
Q Consensus 387 ~a~v~v~~a~~L~~~~~~dpyv~v~~~~----~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~i~V~d~~~~~~~~ 461 (505)
...|+|++|++....+.+||||++++.. ..++|+++++|.||+|||+|.|.+..... ...|.|+|||++. ++
T Consensus 27 ~L~V~v~~a~~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~---~~ 103 (138)
T 1wfm_A 27 ELFVTRLEAVTSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDR---FS 103 (138)
T ss_dssp EEEEEEEEEECCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCS---SC
T ss_pred EEEEEEEEEEcCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCC---CC
Confidence 3489999999766667899999999942 24699999999999999999999876543 3589999999984 78
Q ss_pred CCCccEEEEEeccccccCCEEeEEEEeCCCC
Q 038990 462 SKESLGYVDINLHDVLHNGRLKEKYHLINSK 492 (505)
Q Consensus 462 ~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~ 492 (505)
++++||++.++|.++.......+||+|....
T Consensus 104 ~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 104 RHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp TTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred CCcEEEEEEEEcccccCcccccceeeCcCCC
Confidence 8999999999999997655668999998754
No 51
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.62 E-value=8.6e-15 Score=153.03 Aligned_cols=164 Identities=23% Similarity=0.290 Sum_probs=121.5
Q ss_pred cceEEEEecCCc-eEEEEeeEecccccc-chhhHHHHHHHHHHHHHhhccC-----C--CCcccccccC--------C--
Q 038990 193 FAGIAVSLMEKP-EVDFGLKLVGGDMMA-IPGLYQFIQETIRNQISALYLW-----P--QPLEIPILDG--------S-- 253 (505)
Q Consensus 193 ~~~~~~sf~~~P-~~d~~~~~~g~~i~~-iP~l~~~i~~~i~~~l~~~~v~-----P--~~~~~~l~~~--------~-- 253 (505)
+..+.=|+...| -|++.+.|+ -++.. -+.-...++.++.+++.+.-.+ | |.. .++... .
T Consensus 304 ~~~W~~Sv~~~P~~I~~~l~PI-~~Lv~~~~~kr~nLk~Ai~~Yl~e~~~c~~C~~PC~nn~-~~l~g~~C~C~C~~~~~ 381 (540)
T 3nsj_A 304 FSTWTASLPSNPGLVDYSLEPL-HTLLEEQNPKREALRQAISHYIMSRARWQNCSRPCRSGQ-HKSSHDSCQCECQDSKV 381 (540)
T ss_dssp HHHHHHHTTTSCEEEEEEEEEG-GGGSCTTCTHHHHHHHHHHHHHHHTCBCCCTTSCCBTTE-EECSSCTTCEEESCTTT
T ss_pred HHHHHHHHhhCCceEEEEEEEH-HHhcCCcHHHHHHHHHHHHHHHHhcCchhhhcccccCCC-ccCCCCceEeeCCCCCC
Confidence 344444555667 459999998 44432 3455678888888888877655 2 111 122111 0
Q ss_pred ----cCCCcCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeec-CCCCEE
Q 038990 254 ----LGAIKKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKD-PETQVL 328 (505)
Q Consensus 254 ----~~~~~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~-~~~~~L 328 (505)
.-......|.|+|+|++|++|+. |..|++||||++++++.. .||+++++++||+|||+|.|.+.. ...+.|
T Consensus 382 t~~~~C~~~~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~---~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L 457 (540)
T 3nsj_A 382 TNQDCCPRQRGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQE---FRTGVVWNNNNPRWTDKMDFENVLLSTGGPL 457 (540)
T ss_dssp BCGGGCBSSTTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEE---EECCCBCSCSSCBCCCCEEEEEEETTTCCCE
T ss_pred cccccccccCcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEe---eeeeeecCCCCCCCCeEEEEEEecCCCCCEE
Confidence 01234458999999999999998 988999999999999754 699999999999999999998653 457889
Q ss_pred EEEEEEcCCCCCCcccEEEEEECccCCCCCeeEEEEec
Q 038990 329 QLHVYDWEKVGTHDKLGMQVVPLRSLTPNETKELTLDL 366 (505)
Q Consensus 329 ~v~v~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l 366 (505)
+|+|||+|..++||+||++.++|.. + .++.|..|
T Consensus 458 ~~~V~D~D~~~~dD~LG~~~~~L~~---g-~~~~~~~l 491 (540)
T 3nsj_A 458 RVQVWDADYGWDDDLLGSCDRSPHS---G-FHEVTCEL 491 (540)
T ss_dssp EEEEEECCSSSCCEEEEEEEECCCS---E-EEEEEEEC
T ss_pred EEEEEECCCCCCCCEEEEEEEEeeC---C-cEEEEEEc
Confidence 9999999999999999999999872 2 34556653
No 52
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.61 E-value=1.6e-15 Score=133.54 Aligned_cols=104 Identities=20% Similarity=0.356 Sum_probs=87.2
Q ss_pred EEEEEeeecCCCCC--CCCCCEEEEEEcC-----eEEEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEEEccCCccC
Q 038990 388 GKATEYGAKDLEGK--HHNNPYAVVICRG-----EQKKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRGLRL 460 (505)
Q Consensus 388 a~v~v~~a~~L~~~--~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~~~~ 460 (505)
..|+|.+|++|+.. +.+||||++++.. ..++|+++++|.||+|||+|.|.+........|.|+|||++. +
T Consensus 29 L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~---~ 105 (153)
T 3fbk_A 29 LLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRAS---Q 105 (153)
T ss_dssp EEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCS---S
T ss_pred EEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCC---C
Confidence 48999999999764 5899999999943 457999999999999999999999654445679999999984 5
Q ss_pred CC-CCccEEEEEecccccc-CCEEeEEEEeCCCCCc
Q 038990 461 RS-KESLGYVDINLHDVLH-NGRLKEKYHLINSKNG 494 (505)
Q Consensus 461 ~~-d~~lG~~~i~L~~l~~-~~~~~~~~~L~~~~~G 494 (505)
++ +++||++.++|+++.. +....+||+|.+...|
T Consensus 106 ~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~g 141 (153)
T 3fbk_A 106 SRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHLG 141 (153)
T ss_dssp GGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTGG
T ss_pred CCCCcEEEEEEEEHHHhcCCCCccccEEECCChhhc
Confidence 55 8999999999999985 5677899999876544
No 53
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.60 E-value=1.8e-15 Score=133.02 Aligned_cols=101 Identities=20% Similarity=0.273 Sum_probs=86.5
Q ss_pred EEEEEeeecCCCCC---CCCCCEEEEEEc---CeEEEeecccCCCCCccCceEEEEeeCCCC-CCeEEEEEEEccCCccC
Q 038990 388 GKATEYGAKDLEGK---HHNNPYAVVICR---GEQKKTKMIKKCRDPIWNEEFQFDFEEAPL-KEKIHIEVKSKRRGLRL 460 (505)
Q Consensus 388 a~v~v~~a~~L~~~---~~~dpyv~v~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~i~V~d~~~~~~~ 460 (505)
..|+|++|++|+.. +.+||||++++. ...++|++++++.||+|||+|.|.+..... ...|.|+|||++. +
T Consensus 44 L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~---~ 120 (152)
T 1rsy_A 44 LLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR---F 120 (152)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS---S
T ss_pred EEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC---C
Confidence 48999999999864 578999999994 346799999999999999999999864322 3589999999984 6
Q ss_pred CCCCccEEEEEeccccccCCEEeEEEEeCCC
Q 038990 461 RSKESLGYVDINLHDVLHNGRLKEKYHLINS 491 (505)
Q Consensus 461 ~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~ 491 (505)
+++++||++.++|+++..+....+||+|.+.
T Consensus 121 ~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 121 SKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp SCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred CCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 7899999999999999887778999999764
No 54
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.60 E-value=4.2e-15 Score=126.95 Aligned_cols=88 Identities=20% Similarity=0.312 Sum_probs=73.2
Q ss_pred CeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeee-CCCCCCeEceeEEEEeecCCCCEEEEEEEEcCCC
Q 038990 260 PVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVK-MKTLNPEWNEDFKLTVKDPETQVLQLHVYDWEKV 338 (505)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~-~~t~nP~wne~f~~~v~~~~~~~L~v~v~d~d~~ 338 (505)
+.+.|.|+|++|++++. .|.+||||+++ . +. .+|+++ .++.||.|||+|.|.+.+. ...|.++|||+| .
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~-~-~~---~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d-~ 72 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK-V-QN---VKSTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG-L 72 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE-E-TT---EEEECCCEESSSCEEEEEEEEEECCC-SSEEEEEEEECC-S
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE-e-cC---EEEeEecCCCCCceECCEEEEEEeCC-CCeEEEEEEECC-C
Confidence 56999999999998853 57899999999 2 11 244444 4799999999999999764 467999999999 8
Q ss_pred CCCcccEEEEEECccCCCC
Q 038990 339 GTHDKLGMQVVPLRSLTPN 357 (505)
Q Consensus 339 ~~d~~lG~~~i~l~~l~~~ 357 (505)
++|++||++.++|+++...
T Consensus 73 ~~dd~iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 73 IWDTMVGTVWIPLRTIRQS 91 (131)
T ss_dssp SCEEEEEEEEEEGGGSCBC
T ss_pred CCCCeEEEEEEEHHHhhhc
Confidence 8999999999999998654
No 55
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.59 E-value=3.5e-15 Score=129.31 Aligned_cols=104 Identities=28% Similarity=0.428 Sum_probs=85.5
Q ss_pred eEEEEEeeecCCCCC---CCCCCEEEEEEc-----CeEEEeecccCCCCCccCceEEEEeeC-CC-CCCeEEEEEEEccC
Q 038990 387 VGKATEYGAKDLEGK---HHNNPYAVVICR-----GEQKKTKMIKKCRDPIWNEEFQFDFEE-AP-LKEKIHIEVKSKRR 456 (505)
Q Consensus 387 ~a~v~v~~a~~L~~~---~~~dpyv~v~~~-----~~~~kT~v~~~t~nP~wne~f~f~v~~-~~-~~~~l~i~V~d~~~ 456 (505)
...|+|++|++|+.. +.+||||++++. ...++|++++++.||+|||+|.|.+.. .. ....|.|+|||++.
T Consensus 22 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~ 101 (141)
T 1v27_A 22 QLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR 101 (141)
T ss_dssp EEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCS
T ss_pred EEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCC
Confidence 348999999999864 578999999993 456799999999999999999999532 21 23589999999985
Q ss_pred CccCCC--CCccEEEEEeccccccCCEEeEEEEeCCCCCc
Q 038990 457 GLRLRS--KESLGYVDINLHDVLHNGRLKEKYHLINSKNG 494 (505)
Q Consensus 457 ~~~~~~--d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~~G 494 (505)
++. +++||++.++|.++.... ..+||+|.....|
T Consensus 102 ---~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~g 137 (141)
T 1v27_A 102 ---VREEESEFLGEILIELETALLDD-EPHWYKLQTHDSG 137 (141)
T ss_dssp ---SSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSSC
T ss_pred ---CcCCCCceEEEEEEEccccCCCC-CCceEECcccccC
Confidence 554 899999999999987755 6899999876555
No 56
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=4.7e-15 Score=128.56 Aligned_cols=102 Identities=22% Similarity=0.253 Sum_probs=85.8
Q ss_pred EEEEEeeecCCCCC---CCCCCEEEEEEc---CeEEEeecccCCCCCccCceEEEEeeCC--CCCCeEEEEEEEccCCcc
Q 038990 388 GKATEYGAKDLEGK---HHNNPYAVVICR---GEQKKTKMIKKCRDPIWNEEFQFDFEEA--PLKEKIHIEVKSKRRGLR 459 (505)
Q Consensus 388 a~v~v~~a~~L~~~---~~~dpyv~v~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~~~l~i~V~d~~~~~~ 459 (505)
..|+|++|++|+.. +.+||||++++. ...++|++++++.||+|||+|.|.+... .....|.|+|||++.
T Consensus 28 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~--- 104 (141)
T 2d8k_A 28 LTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR--- 104 (141)
T ss_dssp EEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS---
T ss_pred EEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCC---
Confidence 48999999999864 579999999995 3467999999999999999999985321 123589999999984
Q ss_pred CCCCCccEEEEEeccccccCCEEeEEEEeCCCC
Q 038990 460 LRSKESLGYVDINLHDVLHNGRLKEKYHLINSK 492 (505)
Q Consensus 460 ~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~ 492 (505)
++++++||++.++|.++..+.....||+|...+
T Consensus 105 ~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 105 FSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp SSSCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred CCCCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 678999999999999998877778999998654
No 57
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.59 E-value=2.1e-15 Score=131.97 Aligned_cols=103 Identities=17% Similarity=0.277 Sum_probs=87.1
Q ss_pred eEEEEEeeecCCCC----CCCCCCEEEEEEcC-----eEEEeecccCCCCCccCceEEEEeeCCCC-CCeEEEEEEEccC
Q 038990 387 VGKATEYGAKDLEG----KHHNNPYAVVICRG-----EQKKTKMIKKCRDPIWNEEFQFDFEEAPL-KEKIHIEVKSKRR 456 (505)
Q Consensus 387 ~a~v~v~~a~~L~~----~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~i~V~d~~~ 456 (505)
...|+|++|++|+. .+.+||||++++.. ..++|+++++|.||+|||+|.|.+..... ...|.|+|||++.
T Consensus 24 ~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~ 103 (148)
T 3fdw_A 24 SLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGR 103 (148)
T ss_dssp EEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECG
T ss_pred EEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCC
Confidence 34899999999984 35799999999963 36799999999999999999999876543 3479999999984
Q ss_pred CccCCCCCccEEEEEeccccccCCEEeEEEEeCCCC
Q 038990 457 GLRLRSKESLGYVDINLHDVLHNGRLKEKYHLINSK 492 (505)
Q Consensus 457 ~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~ 492 (505)
++++++||++.++|+++..+....+||+|...+
T Consensus 104 ---~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 136 (148)
T 3fdw_A 104 ---FGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKI 136 (148)
T ss_dssp ---GGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC-
T ss_pred ---CcCCcEEEEEEEEcccccccCCccceEECcCcc
Confidence 678999999999999998776678999998653
No 58
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.58 E-value=3.4e-15 Score=129.77 Aligned_cols=100 Identities=20% Similarity=0.289 Sum_probs=86.1
Q ss_pred EEEEEeeecCCCCC---CCCCCEEEEEE---cCeEEEeecccCCCCCccCceEEEEeeCCCC-CCeEEEEEEEccCCccC
Q 038990 388 GKATEYGAKDLEGK---HHNNPYAVVIC---RGEQKKTKMIKKCRDPIWNEEFQFDFEEAPL-KEKIHIEVKSKRRGLRL 460 (505)
Q Consensus 388 a~v~v~~a~~L~~~---~~~dpyv~v~~---~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~i~V~d~~~~~~~ 460 (505)
..|+|++|++|+.. +.+||||++++ +...++|++++++.||+|||+|.|.+..... ...|.|+|||++. +
T Consensus 36 L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~---~ 112 (143)
T 3f04_A 36 LLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR---F 112 (143)
T ss_dssp EEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS---S
T ss_pred EEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC---C
Confidence 48999999999874 58999999999 3446799999999999999999999864322 3589999999984 6
Q ss_pred CCCCccEEEEEeccccccCCEEeEEEEeCC
Q 038990 461 RSKESLGYVDINLHDVLHNGRLKEKYHLIN 490 (505)
Q Consensus 461 ~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~ 490 (505)
+++++||++.++|+++..+....+||+|..
T Consensus 113 ~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 113 SKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp SCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 789999999999999988878899999964
No 59
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.57 E-value=5.2e-15 Score=126.12 Aligned_cols=99 Identities=28% Similarity=0.428 Sum_probs=79.2
Q ss_pred eEEEEEeeecCCCCC---CCCCCEEEEEE-----cCeEEEeecccCCCCCccCceEEEEeeCC-C-CCCeEEEEEEEccC
Q 038990 387 VGKATEYGAKDLEGK---HHNNPYAVVIC-----RGEQKKTKMIKKCRDPIWNEEFQFDFEEA-P-LKEKIHIEVKSKRR 456 (505)
Q Consensus 387 ~a~v~v~~a~~L~~~---~~~dpyv~v~~-----~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~-~~~~l~i~V~d~~~ 456 (505)
...|+|.+|++|+.. +.+||||++++ +...++|++++++.||+|||+|.|.+... . ....|.|+|||++.
T Consensus 19 ~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~ 98 (129)
T 2bwq_A 19 QLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR 98 (129)
T ss_dssp EEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC--
T ss_pred EEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCc
Confidence 348999999999864 57899999999 34567999999999999999999995321 1 23589999999984
Q ss_pred CccCCC--CCccEEEEEeccccccCCEEeEEEEeC
Q 038990 457 GLRLRS--KESLGYVDINLHDVLHNGRLKEKYHLI 489 (505)
Q Consensus 457 ~~~~~~--d~~lG~~~i~L~~l~~~~~~~~~~~L~ 489 (505)
.+. +++||++.++|.++.... ..+||+|+
T Consensus 99 ---~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 99 ---VREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp --------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred ---CcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 555 899999999999988765 68999984
No 60
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.57 E-value=1.4e-15 Score=133.93 Aligned_cols=100 Identities=18% Similarity=0.214 Sum_probs=84.5
Q ss_pred eEEEEEeeecCCCCC---CCCCCEEEEEEcC---e---EEEeecccCCCCCccCceEEEEeeCCCC-CCeEEEEEEEccC
Q 038990 387 VGKATEYGAKDLEGK---HHNNPYAVVICRG---E---QKKTKMIKKCRDPIWNEEFQFDFEEAPL-KEKIHIEVKSKRR 456 (505)
Q Consensus 387 ~a~v~v~~a~~L~~~---~~~dpyv~v~~~~---~---~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~i~V~d~~~ 456 (505)
...|.|++|++|+.. +.+||||++++.+ . ++||+++++|.||+|||+|.|.+..... ...|.|+|||++.
T Consensus 44 ~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~ 123 (155)
T 2z0u_A 44 QFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDR 123 (155)
T ss_dssp EEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECT
T ss_pred EEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCC
Confidence 348999999999753 6899999999965 2 5799999999999999999999865322 3489999999984
Q ss_pred CccCCCCCccEEEEEecccccc-CCEEeEEEEeC
Q 038990 457 GLRLRSKESLGYVDINLHDVLH-NGRLKEKYHLI 489 (505)
Q Consensus 457 ~~~~~~d~~lG~~~i~L~~l~~-~~~~~~~~~L~ 489 (505)
++++++||++.++|+++.. .....+||+|.
T Consensus 124 ---~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 124 ---SHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp ---TSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred ---CCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 7789999999999999964 45678999985
No 61
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.57 E-value=1.8e-14 Score=121.47 Aligned_cols=114 Identities=17% Similarity=0.300 Sum_probs=100.7
Q ss_pred ceE-EEEEeeecCCCCCCCCCCEEEEEEcCeEEEeeccc-CCCCCccCceEEEEeeCCCC-CCeEEEEEEEccCCccCCC
Q 038990 386 EVG-KATEYGAKDLEGKHHNNPYAVVICRGEQKKTKMIK-KCRDPIWNEEFQFDFEEAPL-KEKIHIEVKSKRRGLRLRS 462 (505)
Q Consensus 386 ~~a-~v~v~~a~~L~~~~~~dpyv~v~~~~~~~kT~v~~-~t~nP~wne~f~f~v~~~~~-~~~l~i~V~d~~~~~~~~~ 462 (505)
.|+ +|++.+|.+|++ .+|||+++.+.+.++||++++ ++.||+|||.|+|.+..+.. ++.|.++|+|+++ +++
T Consensus 20 ~msL~V~l~~a~~Lpg--~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~---v~~ 94 (144)
T 3l9b_A 20 HMALIVHLKTVSELRG--RADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK---VFS 94 (144)
T ss_dssp CEEEEEEEEEEESCCS--CEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT---TSC
T ss_pred cEEEEEEEEEecCCCC--CCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc---ccC
Confidence 565 999999999996 799999999999999999998 69999999999999987532 3489999999985 789
Q ss_pred CCccEEEEEeccccccCCEEeEEEEeCCCC----CceEEEEEEEEe
Q 038990 463 KESLGYVDINLHDVLHNGRLKEKYHLINSK----NGAVQVEIKWKA 504 (505)
Q Consensus 463 d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~----~G~i~l~~~~~~ 504 (505)
+.+||++.++|.++...+.+.-+-+|.+.. .+.|.+++.|.|
T Consensus 95 nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~p 140 (144)
T 3l9b_A 95 NKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQA 140 (144)
T ss_dssp CEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred CCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecC
Confidence 999999999999999988776677787653 589999999987
No 62
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=4.9e-15 Score=129.38 Aligned_cols=101 Identities=21% Similarity=0.261 Sum_probs=84.6
Q ss_pred EEEEEeeecCCCCC----------CCCCCEEEEEEcC---eEEEeecccCCCCCccCceEEEEeeCCCC-CCeEEEEEEE
Q 038990 388 GKATEYGAKDLEGK----------HHNNPYAVVICRG---EQKKTKMIKKCRDPIWNEEFQFDFEEAPL-KEKIHIEVKS 453 (505)
Q Consensus 388 a~v~v~~a~~L~~~----------~~~dpyv~v~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~i~V~d 453 (505)
..|+|++|++|+.. +.+||||++++.. ..++|++++++.||+|||+|.|.+..... ...|.|+|||
T Consensus 28 L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d 107 (147)
T 2enp_A 28 LTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVD 107 (147)
T ss_dssp EEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEEC
T ss_pred EEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEE
Confidence 48999999999863 3799999999963 45799999999999999999999864321 2489999999
Q ss_pred ccCCccCCCCCccEEEEEeccccccCCEEeEEEEeCCC
Q 038990 454 KRRGLRLRSKESLGYVDINLHDVLHNGRLKEKYHLINS 491 (505)
Q Consensus 454 ~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~ 491 (505)
++. ++++++||++.++|.++........||.|...
T Consensus 108 ~d~---~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 108 FDK---FSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp CST---TCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred CCC---CcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 984 67889999999999999876666788888754
No 63
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.56 E-value=4e-15 Score=160.20 Aligned_cols=108 Identities=28% Similarity=0.428 Sum_probs=97.0
Q ss_pred CCeEEEEEEEeeccCccc---cCCCCCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeecCCCCEEEEEEEEc
Q 038990 259 KPVGILHVKVIRAIRLLK---MDIFGASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKDPETQVLQLHVYDW 335 (505)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~---~d~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~~~~~L~v~v~d~ 335 (505)
.+.|.|+|+|++|++|+. +|..|.+||||++++++....++||+++++++||+|||+|.|.+.....+.|+|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 478999999999999999 88889999999999987544557999999999999999999999876778899999999
Q ss_pred CCCCCCcccEEEEEECccCCCCCeeEEEEecc
Q 038990 336 EKVGTHDKLGMQVVPLRSLTPNETKELTLDLV 367 (505)
Q Consensus 336 d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~ 367 (505)
|.++ |++||++.+++.++..+..+..|++|.
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~ 125 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVGEKKEVPFIFN 125 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTTCCCCEEEEET
T ss_pred CCCC-CceeEEEEEEHHHcCCCCceEEEEecC
Confidence 9998 999999999999998887777777764
No 64
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.56 E-value=1.4e-15 Score=132.08 Aligned_cols=102 Identities=22% Similarity=0.324 Sum_probs=85.4
Q ss_pred EEEEEeeecCCCCC---CCCCCEEEEEEcCe--------------EEEeecccCCCCCccCceEEEE-eeCCC-CCCeEE
Q 038990 388 GKATEYGAKDLEGK---HHNNPYAVVICRGE--------------QKKTKMIKKCRDPIWNEEFQFD-FEEAP-LKEKIH 448 (505)
Q Consensus 388 a~v~v~~a~~L~~~---~~~dpyv~v~~~~~--------------~~kT~v~~~t~nP~wne~f~f~-v~~~~-~~~~l~ 448 (505)
..|+|++|++|+.. +.+||||++++.+. .++|+++++|.||+|||.|.|. +.... ....|.
T Consensus 20 L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~ 99 (142)
T 1rh8_A 20 LIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLE 99 (142)
T ss_dssp EEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEEE
T ss_pred EEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEEE
Confidence 47999999999864 57899999999763 3599999999999999999997 54221 235899
Q ss_pred EEEEEccCCccCCCCCccEEEEEeccccccCCEEeEEEEeCCCC
Q 038990 449 IEVKSKRRGLRLRSKESLGYVDINLHDVLHNGRLKEKYHLINSK 492 (505)
Q Consensus 449 i~V~d~~~~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~ 492 (505)
|+|||++. ++++++||++.++|+++.......+||+|.+.+
T Consensus 100 i~V~d~d~---~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 100 VTVWDYDR---FSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp EEEEEECS---SSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred EEEEECCC---CCCCceEEEEEEeccccccCCCCCeEEECCccC
Confidence 99999984 678999999999999998766678999998754
No 65
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.55 E-value=4e-15 Score=130.89 Aligned_cols=109 Identities=19% Similarity=0.239 Sum_probs=83.7
Q ss_pred EEEEEeeecCCCCC---CCCCCEEEEEEc--Ce---EEEeecccCCCCCccCceEEEEeeCCCCC-CeEEEEEEEccCCc
Q 038990 388 GKATEYGAKDLEGK---HHNNPYAVVICR--GE---QKKTKMIKKCRDPIWNEEFQFDFEEAPLK-EKIHIEVKSKRRGL 458 (505)
Q Consensus 388 a~v~v~~a~~L~~~---~~~dpyv~v~~~--~~---~~kT~v~~~t~nP~wne~f~f~v~~~~~~-~~l~i~V~d~~~~~ 458 (505)
..|+|++|++|+.. +.+||||++++. +. +++|++++++.||+|||+|.|.+...... ..|.|+|||++.
T Consensus 32 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~-- 109 (153)
T 1w15_A 32 LTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSER-- 109 (153)
T ss_dssp EEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCT--
T ss_pred EEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCC--
Confidence 48999999999863 578999999994 33 46999999999999999999999775443 479999999984
Q ss_pred cCCCCCccEEEEEeccccccCCEEeEEEEeCCCCCceEEEEEEEEe
Q 038990 459 RLRSKESLGYVDINLHDVLHNGRLKEKYHLINSKNGAVQVEIKWKA 504 (505)
Q Consensus 459 ~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~~G~i~l~~~~~~ 504 (505)
++++++||++.+++++ ......+||+|.+.+...+. +|.+
T Consensus 110 -~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~~p~~~~~---~Wh~ 149 (153)
T 1w15_A 110 -GSRNEVIGRLVLGATA--EGSGGGHWKEICDFPRRQIA---KWHM 149 (153)
T ss_dssp -TSCCEEEEEEEESTTC--CSHHHHHHHHHHHSTTCCEE---EEEE
T ss_pred -CCCCcEEEEEEECCCC--CchHHHHHHHHHhCCCCeee---eccc
Confidence 6789999999999988 22334567776655444443 5554
No 66
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.54 E-value=1.1e-14 Score=130.46 Aligned_cols=99 Identities=22% Similarity=0.303 Sum_probs=85.4
Q ss_pred EEEEEeeecCCCCC----CCCCCEEEEEEcCe-----EEEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEE-EccCC
Q 038990 388 GKATEYGAKDLEGK----HHNNPYAVVICRGE-----QKKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVK-SKRRG 457 (505)
Q Consensus 388 a~v~v~~a~~L~~~----~~~dpyv~v~~~~~-----~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~-d~~~~ 457 (505)
..|+|++|++|+.. +.+||||++++... .++|+++++|.||+|||+|.|.+... ...|.|+|| |++.
T Consensus 32 L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~~L~~~V~~d~d~- 108 (171)
T 2q3x_A 32 LEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQ--GKVLQVIVWGDYGR- 108 (171)
T ss_dssp EEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCT--TEEEEEEEEEECST-
T ss_pred EEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCC--CCEEEEEEEEcCCC-
Confidence 48999999999853 57999999998642 56999999999999999999998543 468999999 8874
Q ss_pred ccCCCCCccEEEEEeccccccCCEEeEEEEeCCC
Q 038990 458 LRLRSKESLGYVDINLHDVLHNGRLKEKYHLINS 491 (505)
Q Consensus 458 ~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~ 491 (505)
++++++||++.++|+++..+....+||+|...
T Consensus 109 --~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 109 --MDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp --TCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred --CCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 67889999999999999877778999999864
No 67
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.53 E-value=5.6e-14 Score=136.65 Aligned_cols=115 Identities=19% Similarity=0.280 Sum_probs=98.2
Q ss_pred eEEEEEeeecCCCCC---CCCCCEEEEEEcC---eEEEeecccCCCCCccCceEEEEeeCCCC-CCeEEEEEEEccCCcc
Q 038990 387 VGKATEYGAKDLEGK---HHNNPYAVVICRG---EQKKTKMIKKCRDPIWNEEFQFDFEEAPL-KEKIHIEVKSKRRGLR 459 (505)
Q Consensus 387 ~a~v~v~~a~~L~~~---~~~dpyv~v~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~i~V~d~~~~~~ 459 (505)
...|+|++|++|+.. +.+||||++++++ ..++|++++++.||+|||+|.|.+..... ...|.|+|||++.
T Consensus 20 ~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~--- 96 (284)
T 2r83_A 20 QLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR--- 96 (284)
T ss_dssp EEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCS---
T ss_pred EEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCC---
Confidence 348999999999864 5899999999964 35799999999999999999999875433 3589999999984
Q ss_pred CCCCCccEEEEEeccccccCCEEeEEEEeCCC------CCceEEEEEEEEe
Q 038990 460 LRSKESLGYVDINLHDVLHNGRLKEKYHLINS------KNGAVQVEIKWKA 504 (505)
Q Consensus 460 ~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~------~~G~i~l~~~~~~ 504 (505)
++.+++||++.++|.++..+....+||+|... ..|+|.++++|.|
T Consensus 97 ~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p 147 (284)
T 2r83_A 97 FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVP 147 (284)
T ss_dssp SSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEET
T ss_pred CCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecC
Confidence 67899999999999999888888999999753 3699999999875
No 68
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.53 E-value=5.7e-15 Score=131.79 Aligned_cols=87 Identities=21% Similarity=0.278 Sum_probs=74.9
Q ss_pred EEEEEeeecCCCCC---CCCCCEEEEEEcC-----eEEEeecccCCCCCccCceEEEEeeCCCC-CCeEEEEEEEccCCc
Q 038990 388 GKATEYGAKDLEGK---HHNNPYAVVICRG-----EQKKTKMIKKCRDPIWNEEFQFDFEEAPL-KEKIHIEVKSKRRGL 458 (505)
Q Consensus 388 a~v~v~~a~~L~~~---~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~i~V~d~~~~~ 458 (505)
..|+|++|++|+.. +.+||||++++.+ ..++|++++++.||+|||+|.|.+..... ...|.|+|||++.
T Consensus 39 L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~-- 116 (166)
T 2cm5_A 39 LIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDI-- 116 (166)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS--
T ss_pred EEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCC--
Confidence 48999999999864 5799999999976 46799999999999999999999975432 3589999999984
Q ss_pred cCCCCCccEEEEEeccccc
Q 038990 459 RLRSKESLGYVDINLHDVL 477 (505)
Q Consensus 459 ~~~~d~~lG~~~i~L~~l~ 477 (505)
++++++||++.++|.++.
T Consensus 117 -~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 117 -GKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp -SSCCEEEEEEEEETTCCH
T ss_pred -CCCCcEEEeEEEecccCC
Confidence 678999999999999853
No 69
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.53 E-value=1.3e-14 Score=153.10 Aligned_cols=106 Identities=29% Similarity=0.453 Sum_probs=92.7
Q ss_pred CCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeecCCCCEEEEEEEEcCCC
Q 038990 259 KPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKDPETQVLQLHVYDWEKV 338 (505)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~~~~~L~v~v~d~d~~ 338 (505)
...|.|+|+|++|++|+++|..|.+||||++++++.. ++|+++++|+||.|||+|.|.+.....+.|.++|||+|..
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~---~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQS---YTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEE---EECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCee---ccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 4678999999999999999999999999999998754 5999999999999999999999877778899999999999
Q ss_pred CCCcccEEEEEECccCCCCCe----eEEEEecc
Q 038990 339 GTHDKLGMQVVPLRSLTPNET----KELTLDLV 367 (505)
Q Consensus 339 ~~d~~lG~~~i~l~~l~~~~~----~~~~l~l~ 367 (505)
++|++||++.++++++..+.. ...|+.+.
T Consensus 461 ~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~ 493 (510)
T 3jzy_A 461 SPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLH 493 (510)
T ss_dssp SSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECB
T ss_pred CCCCceEEEEEEHHHhccccCCCCceeeeecCC
Confidence 999999999999999876533 44566553
No 70
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.52 E-value=3.5e-14 Score=126.28 Aligned_cols=90 Identities=19% Similarity=0.278 Sum_probs=74.5
Q ss_pred cCCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeeeC-CCCCCeEceeEEEEeecCCCCEEEEEEEEcC
Q 038990 258 KKPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVKM-KTLNPEWNEDFKLTVKDPETQVLQLHVYDWE 336 (505)
Q Consensus 258 ~~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~~-~t~nP~wne~f~~~v~~~~~~~L~v~v~d~d 336 (505)
..+.+.|+|+|++|++++ ..|.+||||+++ . +. .+|++++ ++.||.|||+|.|.+.+. ...|.|+|||+|
T Consensus 10 ~g~~~~L~V~V~~A~~l~---~~g~~DPYV~v~-~-~~---~kt~~~~~~t~nP~WnE~f~f~v~~~-~~~L~~~V~D~d 80 (167)
T 2cjs_A 10 GGILSLLCVGVKKAKFDG---AQEKFNTYVTLK-V-QN---VESTTIAVRGSQPSWEQDFMFEINRL-DLGLTVEVWNKG 80 (167)
T ss_dssp CSCCCEEEEEEEEEECSS---CGGGCEEEEEEE-E-TT---EEEECCCEESSSCEEEEEEEEECCCT-TSEEEEEEEECC
T ss_pred CCceEEEEEEEEEEECCC---CCCCCCeEEEEE-e-cc---eEEEEecCCCCCCCCCCEEEEEeeCC-CCEEEEEEEECC
Confidence 345789999999999884 257899999999 2 11 3555554 699999999999999764 467999999999
Q ss_pred CCCCCcccEEEEEECccCCCC
Q 038990 337 KVGTHDKLGMQVVPLRSLTPN 357 (505)
Q Consensus 337 ~~~~d~~lG~~~i~l~~l~~~ 357 (505)
.++|++||++.++|+++...
T Consensus 81 -~~~dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 81 -LIWDTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp -SSCCEEEEEEEEEGGGSCBC
T ss_pred -CCCCceEEEEEEEHHHhccc
Confidence 88999999999999998654
No 71
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=8.2e-15 Score=127.16 Aligned_cols=101 Identities=19% Similarity=0.281 Sum_probs=83.5
Q ss_pred EEEEEeeecCCCCC---CCCCCEEEEEEcC-----eEEEeecccCCCCCccCceEEEEeeCCCC-CCeEEEEEEEccCCc
Q 038990 388 GKATEYGAKDLEGK---HHNNPYAVVICRG-----EQKKTKMIKKCRDPIWNEEFQFDFEEAPL-KEKIHIEVKSKRRGL 458 (505)
Q Consensus 388 a~v~v~~a~~L~~~---~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~i~V~d~~~~~ 458 (505)
..|+|++|++|+.. + +||||++++.. ..++|+++++|.||+|||+|.|.+..... ...|.|+|||++.
T Consensus 26 L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~-- 102 (142)
T 2dmg_A 26 LIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGG-- 102 (142)
T ss_dssp EEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCC--
T ss_pred EEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCC--
Confidence 48999999999863 5 99999999943 45799999999999999999999864322 2489999999984
Q ss_pred cCC--CCCccEEEEEeccccccCCEEeEEEEeCCCC
Q 038990 459 RLR--SKESLGYVDINLHDVLHNGRLKEKYHLINSK 492 (505)
Q Consensus 459 ~~~--~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~ 492 (505)
++ .+++||++.++|+++.......+||+|...+
T Consensus 103 -~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~ 137 (142)
T 2dmg_A 103 -FLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDS 137 (142)
T ss_dssp -SSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSC
T ss_pred -ccccCCcEEEEEEEecccccccccccceeeccCCC
Confidence 44 3579999999999988776778999998753
No 72
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.52 E-value=6.5e-14 Score=120.81 Aligned_cols=101 Identities=20% Similarity=0.302 Sum_probs=83.3
Q ss_pred EEEEEeeecCCCCC----CCCCCEEEEEEcC---eEEEeecccCCCCCccCceEEEE-eeCCCC-CCeEEEEEEEccCCc
Q 038990 388 GKATEYGAKDLEGK----HHNNPYAVVICRG---EQKKTKMIKKCRDPIWNEEFQFD-FEEAPL-KEKIHIEVKSKRRGL 458 (505)
Q Consensus 388 a~v~v~~a~~L~~~----~~~dpyv~v~~~~---~~~kT~v~~~t~nP~wne~f~f~-v~~~~~-~~~l~i~V~d~~~~~ 458 (505)
..|+|++|++|+.. +.+||||++++.+ ..++|++++++.||+|||+|.|. +..... ...|.|+|||++.
T Consensus 24 L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~-- 101 (138)
T 1ugk_A 24 FVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDR-- 101 (138)
T ss_dssp EEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECS--
T ss_pred EEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCC--
Confidence 48999999999863 5689999999964 56799999999999999999996 654322 3489999999984
Q ss_pred cCCCCCccEEEEEeccccccCC-EEeEEEEeCCC
Q 038990 459 RLRSKESLGYVDINLHDVLHNG-RLKEKYHLINS 491 (505)
Q Consensus 459 ~~~~d~~lG~~~i~L~~l~~~~-~~~~~~~L~~~ 491 (505)
++++++||++.++|+++..+. ...-|++|...
T Consensus 102 -~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 102 -FSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp -SCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred -CCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 778999999999999998754 34567888754
No 73
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.51 E-value=3.1e-14 Score=123.50 Aligned_cols=101 Identities=23% Similarity=0.370 Sum_probs=83.6
Q ss_pred eEEEEEeeecCCCCC---CCCCCEEEEEEcC-----eEEEeecccCCCCCccCceEEEE-eeCCCC-CCeEEEEEEEccC
Q 038990 387 VGKATEYGAKDLEGK---HHNNPYAVVICRG-----EQKKTKMIKKCRDPIWNEEFQFD-FEEAPL-KEKIHIEVKSKRR 456 (505)
Q Consensus 387 ~a~v~v~~a~~L~~~---~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~-v~~~~~-~~~l~i~V~d~~~ 456 (505)
...|+|++|++|+.. +.+||||++++.+ ..++|++++++.||+|||+|.|. +..... ...|.|+|||++.
T Consensus 30 ~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~ 109 (142)
T 2chd_A 30 NLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDK 109 (142)
T ss_dssp EEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECT
T ss_pred EEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCC
Confidence 348999999999864 5789999999975 56799999999999999999998 543212 2589999999984
Q ss_pred CccCCCCCccEEEEEeccccccCCEEeEEEEeCC
Q 038990 457 GLRLRSKESLGYVDINLHDVLHNGRLKEKYHLIN 490 (505)
Q Consensus 457 ~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~ 490 (505)
++++++||++.++|+++..+....-|++|..
T Consensus 110 ---~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 110 ---FGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp ---TSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred ---CCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 6778999999999999988776566777754
No 74
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.51 E-value=7.9e-15 Score=126.52 Aligned_cols=109 Identities=26% Similarity=0.370 Sum_probs=84.5
Q ss_pred EEEEEeeecCCCCC---CCCCCEEEEEEcC-----eEEEeecccCCCCCccCceEEEEeeCCCC-CCeEEEEEEEccCCc
Q 038990 388 GKATEYGAKDLEGK---HHNNPYAVVICRG-----EQKKTKMIKKCRDPIWNEEFQFDFEEAPL-KEKIHIEVKSKRRGL 458 (505)
Q Consensus 388 a~v~v~~a~~L~~~---~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~i~V~d~~~~~ 458 (505)
..|+|.+|++|+.. +.+||||++++.+ ..++|++++++.||+|||+|.|.+..... ...|.|+|||++.
T Consensus 18 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~-- 95 (138)
T 3n5a_A 18 IIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDK-- 95 (138)
T ss_dssp EEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCS--
T ss_pred EEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCC--
Confidence 48999999999864 5799999999964 35699999999999999999999876532 2479999999984
Q ss_pred cCCCCCccEEEEEeccccccCCEEeEEEEeCCCCCceEEEEEEEEe
Q 038990 459 RLRSKESLGYVDINLHDVLHNGRLKEKYHLINSKNGAVQVEIKWKA 504 (505)
Q Consensus 459 ~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~~G~i~l~~~~~~ 504 (505)
++++++||++.++|+++.. ...+|++|.+..+..+. +|.+
T Consensus 96 -~~~~~~lG~~~i~l~~~~~--~~~~W~~l~~~~~~~~~---~Wh~ 135 (138)
T 3n5a_A 96 -LSRNDVIGKIYLSWKSGPG--EVKHWKDMIARPRQPVA---QWHQ 135 (138)
T ss_dssp -SSCCEEEEEEEESSSSCHH--HHHHHHHHHHSTTCCEE---EEEE
T ss_pred -CCCCcEEEEEEEccccCCh--HHHHHHHHHhCCCCeEE---EEee
Confidence 6789999999999987542 23466666654444333 4544
No 75
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.49 E-value=8.4e-14 Score=118.84 Aligned_cols=107 Identities=19% Similarity=0.205 Sum_probs=80.9
Q ss_pred EEEEEeeecCCCCCCCCCCEEEEEEcCeEEEeeccc-CCCCCccCceEEEEeeCCCCCCeEEEEEEEccCCccCCCCCcc
Q 038990 388 GKATEYGAKDLEGKHHNNPYAVVICRGEQKKTKMIK-KCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRGLRLRSKESL 466 (505)
Q Consensus 388 a~v~v~~a~~L~~~~~~dpyv~v~~~~~~~kT~v~~-~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~~~~~~d~~l 466 (505)
..|+|.+|++++..+.+||||+++ . +..+|++++ ++.||+|||+|.|.+.+. ...|.|+|||++ .++|++|
T Consensus 7 L~V~V~~A~~l~~~g~~DPYv~v~-~-~~~kt~~~~~~t~nP~WnE~f~f~v~~~--~~~L~~~V~D~d----~~~dd~i 78 (131)
T 2cjt_A 7 LCVGVKKAKFDGAQEKFNTYVTLK-V-QNVKSTTIAVRGSQPSWEQDFMFEINRL--DLGLTVEVWNKG----LIWDTMV 78 (131)
T ss_dssp EEEEEEEEECSSCGGGCEEEEEEE-E-TTEEEECCCEESSSCEEEEEEEEEECCC--SSEEEEEEEECC----SSCEEEE
T ss_pred EEEEEEEeECCCCCCCcCeEEEEE-e-cCEEEeEecCCCCCceECCEEEEEEeCC--CCeEEEEEEECC----CCCCCeE
Confidence 378999999997667899999999 3 334555555 699999999999999864 357999999997 5679999
Q ss_pred EEEEEeccccccCC--EEeEEEEeCC-------CC-------CceEEEEEEE
Q 038990 467 GYVDINLHDVLHNG--RLKEKYHLIN-------SK-------NGAVQVEIKW 502 (505)
Q Consensus 467 G~~~i~L~~l~~~~--~~~~~~~L~~-------~~-------~G~i~l~~~~ 502 (505)
|++.++|+++.... ...+|+++.- .. .+.+.+.++|
T Consensus 79 G~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 79 GTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp EEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred EEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 99999999987643 1124544431 11 3448888877
No 76
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.48 E-value=1.1e-13 Score=145.85 Aligned_cols=112 Identities=17% Similarity=0.309 Sum_probs=99.0
Q ss_pred EEEEEeeecCCCCC---CCCCCEEEEEEcCeEEEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEEEccCCccCCCCC
Q 038990 388 GKATEYGAKDLEGK---HHNNPYAVVICRGEQKKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRGLRLRSKE 464 (505)
Q Consensus 388 a~v~v~~a~~L~~~---~~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~~~~~~d~ 464 (505)
..|+|.+|++|+.. +.+||||++++++..++|+++++|.||+|||+|.|.+... ....|.|+|||++. +++++
T Consensus 389 l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~-~~~~l~~~v~d~d~---~~~~d 464 (510)
T 3jzy_A 389 LMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDL-YQDVLCLTLFDRDQ---FSPDD 464 (510)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCT-TTCEEEEEEEECCS---SSSCC
T ss_pred EEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCC-CCCEEEEEEEeCCC---CCCCC
Confidence 48999999999763 5899999999999999999999999999999999999765 34689999999984 77899
Q ss_pred ccEEEEEeccccccCCE----EeEEEEeCCCCCceEEEEEEEE
Q 038990 465 SLGYVDINLHDVLHNGR----LKEKYHLINSKNGAVQVEIKWK 503 (505)
Q Consensus 465 ~lG~~~i~L~~l~~~~~----~~~~~~L~~~~~G~i~l~~~~~ 503 (505)
+||++.++|+++..+.. ...|++|.+..+|+|+++++++
T Consensus 465 ~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 465 FLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp EEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred ceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 99999999999987543 6799999988899999998875
No 77
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.48 E-value=1.4e-13 Score=121.83 Aligned_cols=102 Identities=20% Similarity=0.302 Sum_probs=83.4
Q ss_pred EEEEEeeecCCCCC---CCCCCEEEEEEcC-----eEEEeecccCCCCCccCceEEEEeeCCCC-CCeEEEEEEEccCCc
Q 038990 388 GKATEYGAKDLEGK---HHNNPYAVVICRG-----EQKKTKMIKKCRDPIWNEEFQFDFEEAPL-KEKIHIEVKSKRRGL 458 (505)
Q Consensus 388 a~v~v~~a~~L~~~---~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~wne~f~f~v~~~~~-~~~l~i~V~d~~~~~ 458 (505)
..|+|++|++|+.. +.+||||++++.+ ..++|++++++.||+|||+|.|.+..... ...|.|+|||++.
T Consensus 27 L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~-- 104 (159)
T 1tjx_A 27 LTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK-- 104 (159)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS--
T ss_pred EEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCC--
Confidence 48999999999864 5799999999963 34699999999999999999999975433 2479999999984
Q ss_pred cCCCCCccEEEEEeccc----------ccc--CCEEeEEEEeCCCC
Q 038990 459 RLRSKESLGYVDINLHD----------VLH--NGRLKEKYHLINSK 492 (505)
Q Consensus 459 ~~~~d~~lG~~~i~L~~----------l~~--~~~~~~~~~L~~~~ 492 (505)
++.+++||++.+++.. ++. +....+||+|....
T Consensus 105 -~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~~ 149 (159)
T 1tjx_A 105 -IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEE 149 (159)
T ss_dssp -SSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCHH
T ss_pred -CCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCcc
Confidence 6789999999999984 333 34668999997643
No 78
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.48 E-value=1.1e-13 Score=116.66 Aligned_cols=101 Identities=18% Similarity=0.301 Sum_probs=87.3
Q ss_pred CeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeeeC-CCCCCeEceeEEEEeecC--CCCEEEEEEEEcC
Q 038990 260 PVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVKM-KTLNPEWNEDFKLTVKDP--ETQVLQLHVYDWE 336 (505)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~~-~t~nP~wne~f~~~v~~~--~~~~L~v~v~d~d 336 (505)
..-.|+|++.+|.+|+ |++|||+++.+.+.+ ++|++++ ++.||.|||.|.+.+..+ .+..|.+.|||++
T Consensus 19 ~~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k---~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~ 90 (144)
T 3l9b_A 19 SHMALIVHLKTVSELR-----GRADRIAKVTFRGQS---FYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYS 90 (144)
T ss_dssp CCEEEEEEEEEEESCC-----SCEEEEEEEEETTEE---EECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEEC
T ss_pred CcEEEEEEEEEecCCC-----CCCCCeEEEEEeccc---eeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECc
Confidence 3457999999999998 578999999997655 5899997 799999999999999754 3678999999999
Q ss_pred CCCCCcccEEEEEECccCCCCCeeEEEEeccc
Q 038990 337 KVGTHDKLGMQVVPLRSLTPNETKELTLDLVK 368 (505)
Q Consensus 337 ~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~ 368 (505)
++++|++||++.++|+++..+.....+..|..
T Consensus 91 ~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD 122 (144)
T 3l9b_A 91 KVFSNKLIGTFRMVLQKVVEENRVEVSDTLID 122 (144)
T ss_dssp TTSCCEEEEEEEEESHHHHHHSEEEEEEEEEC
T ss_pred cccCCCEEEEEEEEhHHhccCCeEEEeecccC
Confidence 99999999999999999998876666666543
No 79
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.44 E-value=3.7e-13 Score=119.60 Aligned_cols=86 Identities=20% Similarity=0.253 Sum_probs=71.9
Q ss_pred eEEEEEeeecCCCCCCCCCCEEEEEEcCeEEEeeccc-CCCCCccCceEEEEeeCCCCCCeEEEEEEEccCCccCCCCCc
Q 038990 387 VGKATEYGAKDLEGKHHNNPYAVVICRGEQKKTKMIK-KCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRGLRLRSKES 465 (505)
Q Consensus 387 ~a~v~v~~a~~L~~~~~~dpyv~v~~~~~~~kT~v~~-~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~~~~~~d~~ 465 (505)
...|+|++|++++..+.+||||+++ .+.++|++++ ++.||+|||+|.|.+.+. ...|.|+|||++ +..|++
T Consensus 15 ~L~V~V~~A~~l~~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~--~~~L~~~V~D~d----~~~dd~ 86 (167)
T 2cjs_A 15 LLCVGVKKAKFDGAQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRL--DLGLTVEVWNKG----LIWDTM 86 (167)
T ss_dssp EEEEEEEEEECSSCGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCT--TSEEEEEEEECC----SSCCEE
T ss_pred EEEEEEEEEECCCCCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCC--CCEEEEEEEECC----CCCCce
Confidence 3589999999987667899999999 3345666665 699999999999999864 458999999997 567999
Q ss_pred cEEEEEeccccccCC
Q 038990 466 LGYVDINLHDVLHNG 480 (505)
Q Consensus 466 lG~~~i~L~~l~~~~ 480 (505)
||++.++|+++....
T Consensus 87 iG~~~i~L~~l~~~~ 101 (167)
T 2cjs_A 87 VGTVWIPLRTIRQSN 101 (167)
T ss_dssp EEEEEEEGGGSCBCS
T ss_pred EEEEEEEHHHhcccC
Confidence 999999999987643
No 80
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.43 E-value=2.6e-14 Score=139.83 Aligned_cols=98 Identities=36% Similarity=0.572 Sum_probs=84.9
Q ss_pred CCeEEEEEEEeeccCccccCCCCCCCcEEEEEECC--eecceeeeeeeCCCCCCeEceeEEEEeecCC--CCEEEEEEEE
Q 038990 259 KPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSG--ERIPAKKTSVKMKTLNPEWNEDFKLTVKDPE--TQVLQLHVYD 334 (505)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~--~~~~~~~T~~~~~t~nP~wne~f~~~v~~~~--~~~L~v~v~d 334 (505)
...|.|.|+|++|++|+.+|..|.+||||++++.+ ....+++|+++++++||.|||+|.|.+.... ...|.|+|||
T Consensus 149 ~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 228 (296)
T 1dqv_A 149 PTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVD 228 (296)
T ss_dssp TTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEE
T ss_pred cccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEe
Confidence 35689999999999999999999999999999963 3345579999999999999999999886432 4579999999
Q ss_pred cCCCCCCcccEEEEEECccCCC
Q 038990 335 WEKVGTHDKLGMQVVPLRSLTP 356 (505)
Q Consensus 335 ~d~~~~d~~lG~~~i~l~~l~~ 356 (505)
+|..++|++||++.++++++..
T Consensus 229 ~d~~~~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 229 YDCIGHNEVIGVCRVGPEAADP 250 (296)
T ss_dssp CCSSSCCEEEEECCCSSCTTCH
T ss_pred CCCCCCCceEEEEEECCccCCc
Confidence 9999999999999999987643
No 81
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.43 E-value=3.8e-13 Score=143.69 Aligned_cols=105 Identities=24% Similarity=0.452 Sum_probs=89.9
Q ss_pred CeEEEEEEEeeccCccccCC--CCCCCcEEEEEECCe--ecceeeeeeeCCC-CCCeEceeEEEEeecCCCCEEEEEEEE
Q 038990 260 PVGILHVKVIRAIRLLKMDI--FGASDPYVQLSLSGE--RIPAKKTSVKMKT-LNPEWNEDFKLTVKDPETQVLQLHVYD 334 (505)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~--~g~~dpyv~v~l~~~--~~~~~~T~~~~~t-~nP~wne~f~~~v~~~~~~~L~v~v~d 334 (505)
..+.|+|+|++|++|+..+. .+.+||||++++.+. ...++||++++++ +||+|||+|.|.+..+....|+|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 57899999999999999884 688999999999552 1234689999987 999999999999987666789999999
Q ss_pred cCCCCCCcccEEEEEECccCCCCCeeEEEEecc
Q 038990 335 WEKVGTHDKLGMQVVPLRSLTPNETKELTLDLV 367 (505)
Q Consensus 335 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~ 367 (505)
+|..++|++||++.+++..+..+. .+++|.
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~ 604 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQGY---RHVHLL 604 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCCEE---EEEEEE
T ss_pred cCCCCCCceeEEEEEEHHHcCCCc---EEEeCC
Confidence 999999999999999999998752 366664
No 82
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.40 E-value=2.5e-12 Score=134.40 Aligned_cols=105 Identities=18% Similarity=0.274 Sum_probs=88.5
Q ss_pred EEEEEeeecCCCC--CCCCCCEEEEEEcCeEEEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEEEccCCccCCCCCc
Q 038990 388 GKATEYGAKDLEG--KHHNNPYAVVICRGEQKKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRGLRLRSKES 465 (505)
Q Consensus 388 a~v~v~~a~~L~~--~~~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~~~~~~d~~ 465 (505)
.+|+|++|++|+. .+.+||||++++++..++|+++++++||+|||.|.|.+.+....+.|.|+|||++. ...|++
T Consensus 396 L~V~V~~A~~L~~D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~---~~~dD~ 472 (540)
T 3nsj_A 396 LVVSNFRAEHLWGDYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY---GWDDDL 472 (540)
T ss_dssp EEEEEEEEESCCCSSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS---SSCCEE
T ss_pred EEEEEEEccCCCcccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC---CCCCCE
Confidence 4899999999986 35799999999999889999999999999999999997543345689999999984 678899
Q ss_pred cEEEEEeccccccCCEEeEEEEeCCCCCceEEEEEEE
Q 038990 466 LGYVDINLHDVLHNGRLKEKYHLINSKNGAVQVEIKW 502 (505)
Q Consensus 466 lG~~~i~L~~l~~~~~~~~~~~L~~~~~G~i~l~~~~ 502 (505)
||++.++|.. +....|++|. .|.|+++++.
T Consensus 473 LG~~~~~L~~----g~~~~~~~l~---~G~l~~~~~~ 502 (540)
T 3nsj_A 473 LGSCDRSPHS----GFHEVTCELN---HGRVKFSYHA 502 (540)
T ss_dssp EEEEEECCCS----EEEEEEEECS---SSEEEEEEEE
T ss_pred EEEEEEEeeC----CcEEEEEEcC---CeEEEEEEEE
Confidence 9999999972 3457888875 5888888764
No 83
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.27 E-value=4.4e-13 Score=139.59 Aligned_cols=113 Identities=14% Similarity=0.196 Sum_probs=17.8
Q ss_pred EEEEEeeecCCCCCCCCCCEEEEEEcCeE-EEeecccCC---CCCccCceEEEEeeCCCCCCeEEEEEEEc-cCCccCCC
Q 038990 388 GKATEYGAKDLEGKHHNNPYAVVICRGEQ-KKTKMIKKC---RDPIWNEEFQFDFEEAPLKEKIHIEVKSK-RRGLRLRS 462 (505)
Q Consensus 388 a~v~v~~a~~L~~~~~~dpyv~v~~~~~~-~kT~v~~~t---~nP~wne~f~f~v~~~~~~~~l~i~V~d~-~~~~~~~~ 462 (505)
.+|+|++|++|+.++ ||||++++++.. .||+++++| .||+|||+|+|.+... ...|.++|||+ +.+...++
T Consensus 13 L~V~VieAk~L~~~d--dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~--~~~L~v~V~d~~d~~~~~~~ 88 (483)
T 3bxj_A 13 LKLWIIEARELPPKK--RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPA--VRALRLHLYRDSDKKRKKDK 88 (483)
T ss_dssp C-----------------------------------------------CCEECC--------------------------
T ss_pred EEEEEEEcCCcCCCC--CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCC--ccEEEEEEEecCCccccCCC
Confidence 479999999998864 999999998764 599999999 9999999999997543 36899999995 31001467
Q ss_pred CCccEEEEEeccccccCCEEeEEEEeCCC---------------------------CCceEEEEEEEEe
Q 038990 463 KESLGYVDINLHDVLHNGRLKEKYHLINS---------------------------KNGAVQVEIKWKA 504 (505)
Q Consensus 463 d~~lG~~~i~L~~l~~~~~~~~~~~L~~~---------------------------~~G~i~l~~~~~~ 504 (505)
+++||++.++++++..+...++||+|.+. ..|.|+|+++|.+
T Consensus 89 d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G~lrL~v~~~~ 157 (483)
T 3bxj_A 89 AGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCPAVRLKARYQT 157 (483)
T ss_dssp ------------------CCEECC--------------------------------------CEEEEEE
T ss_pred CceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCceEEEEEEeee
Confidence 89999999999999887777899999532 1489999999986
No 84
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.26 E-value=8.3e-12 Score=134.49 Aligned_cols=105 Identities=14% Similarity=0.284 Sum_probs=89.7
Q ss_pred eEEEEEeeecCCCC---C---CCCCCEEEEEEcC---eEEEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEEEccCC
Q 038990 387 VGKATEYGAKDLEG---K---HHNNPYAVVICRG---EQKKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRG 457 (505)
Q Consensus 387 ~a~v~v~~a~~L~~---~---~~~dpyv~v~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~ 457 (505)
..+|+|++|++|+. . +.+||||++++.+ .+++|++++++.||+|||+|.|.+... ....|.|+|||++.
T Consensus 19 ~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~-~~~~L~~~V~D~D~- 96 (749)
T 1cjy_A 19 KFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPN-QENVLEITLMDANY- 96 (749)
T ss_dssp EEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTT-SCCBCEEEEEECCS-
T ss_pred EEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCC-CCCEEEEEEEECCC-
Confidence 45899999999987 3 6899999999984 567999999999999999999999875 34589999999985
Q ss_pred ccCCCCCccEEEEEeccccccCCEEeEEEEeCCCCCceEEE
Q 038990 458 LRLRSKESLGYVDINLHDVLHNGRLKEKYHLINSKNGAVQV 498 (505)
Q Consensus 458 ~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~~G~i~l 498 (505)
++ +++||++.++|.++..+....+||+|... +++.+
T Consensus 97 --~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~~--~e~~l 132 (749)
T 1cjy_A 97 --VM-DETLGTATFTVSSMKVGEKKEVPFIFNQV--TEMVL 132 (749)
T ss_dssp --SS-CEEEEEECCBSTTSCTTCCCCEEEEETTT--EEEEE
T ss_pred --CC-CceeEEEEEEHHHcCCCCceEEEEecCCC--ceEee
Confidence 66 99999999999999887777899999753 44443
No 85
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.25 E-value=2.7e-11 Score=129.38 Aligned_cols=109 Identities=17% Similarity=0.308 Sum_probs=91.1
Q ss_pred EEEEEeeecCCCCC-----CCCCCEEEEEEcC-----eEEEeecccCC-CCCccCceEEEEeeCCCCCCeEEEEEEEccC
Q 038990 388 GKATEYGAKDLEGK-----HHNNPYAVVICRG-----EQKKTKMIKKC-RDPIWNEEFQFDFEEAPLKEKIHIEVKSKRR 456 (505)
Q Consensus 388 a~v~v~~a~~L~~~-----~~~dpyv~v~~~~-----~~~kT~v~~~t-~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~ 456 (505)
.+|+|++|++|+.. +.+||||++.+.+ .++||++++++ .||+|||+|+|.+..+.. ..|.|+|||++.
T Consensus 499 L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el-~~L~~~V~D~D~ 577 (624)
T 1djx_A 499 LRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDL-ALVRFMVEDYDS 577 (624)
T ss_dssp EEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGG-CEEEEEEEECCS
T ss_pred EEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCC-CEEEEEEEEcCC
Confidence 58999999999753 4799999999955 46799999997 999999999999987633 589999999984
Q ss_pred CccCCCCCccEEEEEeccccccCCEEeEEEEeCCCC-----CceEEEEEEEE
Q 038990 457 GLRLRSKESLGYVDINLHDVLHNGRLKEKYHLINSK-----NGAVQVEIKWK 503 (505)
Q Consensus 457 ~~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~-----~G~i~l~~~~~ 503 (505)
++++++||++.++|+++..+ .+|++|.+.. .+.|.|+++++
T Consensus 578 ---~~~dd~iG~~~ipl~~L~~G---~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 578 ---SSKNDFIGQSTIPWNSLKQG---YRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp ---SSCCEEEEEEEEEGGGBCCE---EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred ---CCCCceeEEEEEEHHHcCCC---cEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 67899999999999998764 3699997653 46777887764
No 86
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.24 E-value=9.8e-12 Score=135.22 Aligned_cols=108 Identities=31% Similarity=0.508 Sum_probs=91.9
Q ss_pred CeEEEEEEEeeccCccccCCCCCCCcEEEEEECCe--ecceeeeeeeCCCCCCeEceeEEEEeecCC-CCEEEEEEEEcC
Q 038990 260 PVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGE--RIPAKKTSVKMKTLNPEWNEDFKLTVKDPE-TQVLQLHVYDWE 336 (505)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~--~~~~~~T~~~~~t~nP~wne~f~~~v~~~~-~~~L~v~v~d~d 336 (505)
..+.|.|++++|++|+++|..|.+||||++++.+. ...+++|+++++++||.|||+|.|.+.... ...|.++|||+|
T Consensus 170 ~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d 249 (674)
T 3pfq_A 170 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 249 (674)
T ss_dssp CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECC
T ss_pred ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecc
Confidence 45789999999999999999999999999998442 233579999999999999999999987533 457999999999
Q ss_pred CCCCCcccEEEEEECccCCCCCeeEEEEeccc
Q 038990 337 KVGTHDKLGMQVVPLRSLTPNETKELTLDLVK 368 (505)
Q Consensus 337 ~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~ 368 (505)
..++|++||++.++++++.... ...|..+..
T Consensus 250 ~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls 280 (674)
T 3pfq_A 250 LTSRNDFMGSLSFGISELQKAG-VDGWFKLLS 280 (674)
T ss_dssp SSSCCEECCBCCCBTTHHHHCC-EEEEEECBC
T ss_pred cccccccccccccchhhhccCC-cccceeecc
Confidence 9999999999999999988664 366777654
No 87
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.24 E-value=6e-13 Score=138.60 Aligned_cols=102 Identities=22% Similarity=0.307 Sum_probs=15.2
Q ss_pred CCeEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecceeeeeeeCCC---CCCeEceeEEEEeecCCCCEEEEEEEEc
Q 038990 259 KPVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIPAKKTSVKMKT---LNPEWNEDFKLTVKDPETQVLQLHVYDW 335 (505)
Q Consensus 259 ~~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~T~~~~~t---~nP~wne~f~~~v~~~~~~~L~v~v~d~ 335 (505)
+..|.|+|+|++|++|+++| ||||++++++... .||+++++| +||.|||+|.|.+... ...|.++|||.
T Consensus 8 r~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~--~kT~v~~kt~~glnP~WnE~F~f~~~~~-~~~L~v~V~d~ 79 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPKK-----RYYCELCLDDMLY--ARTTSKPRSASGDTVFWGEHFEFNNLPA-VRALRLHLYRD 79 (483)
T ss_dssp EEEECC----------------------------------------------------CCEECC----------------
T ss_pred eeccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEE--eeeeEEeCCCCCCCCccccEEEEecCCC-ccEEEEEEEec
Confidence 45689999999999999877 9999999987543 589999999 9999999999987543 57899999994
Q ss_pred -C---CCCCCcccEEEEEECccCCCCCeeEEEEeccc
Q 038990 336 -E---KVGTHDKLGMQVVPLRSLTPNETKELTLDLVK 368 (505)
Q Consensus 336 -d---~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~~ 368 (505)
| ..++|++||++.++++++..+...+.|++|..
T Consensus 80 ~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~ 116 (483)
T 3bxj_A 80 SDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTL 116 (483)
T ss_dssp ---------------------------CCEECC----
T ss_pred CCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCC
Confidence 4 36789999999999999998877788888753
No 88
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.06 E-value=2.3e-10 Score=124.44 Aligned_cols=104 Identities=22% Similarity=0.399 Sum_probs=88.5
Q ss_pred eEEEEEeeecCCCCC---CCCCCEEEEEE-----cCeEEEeecccCCCCCccCceEEEEeeCCCCCCeEEEEEEEccCCc
Q 038990 387 VGKATEYGAKDLEGK---HHNNPYAVVIC-----RGEQKKTKMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRGL 458 (505)
Q Consensus 387 ~a~v~v~~a~~L~~~---~~~dpyv~v~~-----~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~~ 458 (505)
...|.+.+|++|... +.+||||++++ ...+++|++++++.||+|||.|.|.+.....+..|.++|||++.
T Consensus 173 ~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~-- 250 (674)
T 3pfq_A 173 VLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL-- 250 (674)
T ss_dssp EEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS--
T ss_pred eeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc--
Confidence 358999999999763 68999999999 33457999999999999999999999876555689999999985
Q ss_pred cCCCCCccEEEEEeccccccCCEEeEEEEeCCCCCc
Q 038990 459 RLRSKESLGYVDINLHDVLHNGRLKEKYHLINSKNG 494 (505)
Q Consensus 459 ~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~~G 494 (505)
.+++++||++.++++++..... ++||.|.+...|
T Consensus 251 -~~~dd~iG~~~i~l~~l~~~~~-~~w~~Lls~~~g 284 (674)
T 3pfq_A 251 -TSRNDFMGSLSFGISELQKAGV-DGWFKLLSQEEG 284 (674)
T ss_dssp -SSCCEECCBCCCBTTHHHHCCE-EEEEECBCTTGG
T ss_pred -ccccccccccccchhhhccCCc-ccceeecccccc
Confidence 7889999999999999987654 899999875433
No 89
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.03 E-value=4.8e-10 Score=122.10 Aligned_cols=89 Identities=25% Similarity=0.419 Sum_probs=74.8
Q ss_pred eEEEEEEEeeccCccccCCCCCCCcEEEEEECCee----cceeeeeeeCC-CCCCeEcee-EEEE-eecCCCCEEEEEEE
Q 038990 261 VGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGER----IPAKKTSVKMK-TLNPEWNED-FKLT-VKDPETQVLQLHVY 333 (505)
Q Consensus 261 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~----~~~~~T~~~~~-t~nP~wne~-f~~~-v~~~~~~~L~v~v~ 333 (505)
.+.|+|+|++|++|+.+ .+||||++.+.+.. ..+++|+++++ ++||+|||+ |.|. +..++...|+|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 47899999999999853 58999999997521 13468998875 699999998 9998 76666678999999
Q ss_pred EcCCCCCCcccEEEEEECccCCCC
Q 038990 334 DWEKVGTHDKLGMQVVPLRSLTPN 357 (505)
Q Consensus 334 d~d~~~~d~~lG~~~i~l~~l~~~ 357 (505)
|++ +++||++.+||+.|..+
T Consensus 725 D~d----ddfiG~~~ipL~~L~~G 744 (816)
T 3qr0_A 725 EEN----GKFIGHRVMPLDGIKPG 744 (816)
T ss_dssp ETT----SCEEEEEEEESTTCCCE
T ss_pred ecC----CCeeeEEEEEHHHcCCc
Confidence 985 79999999999999976
No 90
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.03 E-value=3.9e-10 Score=123.40 Aligned_cols=89 Identities=22% Similarity=0.391 Sum_probs=74.2
Q ss_pred eEEEEEEEeeccCccccCCCCCCCcEEEEEECCe---ecceeeeeeeCC-CCCCeEce-eEEEE-eecCCCCEEEEEEEE
Q 038990 261 VGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGE---RIPAKKTSVKMK-TLNPEWNE-DFKLT-VKDPETQVLQLHVYD 334 (505)
Q Consensus 261 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~---~~~~~~T~~~~~-t~nP~wne-~f~~~-v~~~~~~~L~v~v~d 334 (505)
...|.|+|++|++|+.+ .+||||++.+.+. ...+++|+++++ ++||+||| +|.|. +..++...|+|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 45899999999999853 5899999999652 122358998875 59999999 69998 766666789999999
Q ss_pred cCCCCCCcccEEEEEECccCCCC
Q 038990 335 WEKVGTHDKLGMQVVPLRSLTPN 357 (505)
Q Consensus 335 ~d~~~~d~~lG~~~i~l~~l~~~ 357 (505)
+| |++||++.+||..|..+
T Consensus 800 ~d----ddfiG~~~lpL~~L~~G 818 (885)
T 3ohm_B 800 EG----GKFVGHRILPVSAIRSG 818 (885)
T ss_dssp TT----TEEEEEEEEETTTCCCE
T ss_pred CC----ccEEeeEEEEHHHcCCC
Confidence 87 79999999999999876
No 91
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.01 E-value=5.1e-10 Score=122.46 Aligned_cols=97 Identities=25% Similarity=0.373 Sum_probs=78.0
Q ss_pred CeEEEEEEEeeccCccccCCCCCCCcEEEEEECCe---ecceeeee-eeC-CCCCCeEce-eEEE-EeecCCCCEEEEEE
Q 038990 260 PVGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGE---RIPAKKTS-VKM-KTLNPEWNE-DFKL-TVKDPETQVLQLHV 332 (505)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~---~~~~~~T~-~~~-~t~nP~wne-~f~~-~v~~~~~~~L~v~v 332 (505)
..|.|.|+|++|++|+. +.+||||++.+.+. ...++||+ +++ +++||+||| +|.| .+..++...|+|.|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 46899999999999985 46899999999542 22246898 775 569999999 7999 88766667899999
Q ss_pred EEcCCCCCCcccEEEEEECccCCCCCeeEEEEecc
Q 038990 333 YDWEKVGTHDKLGMQVVPLRSLTPNETKELTLDLV 367 (505)
Q Consensus 333 ~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~l~l~ 367 (505)
||+| +++||++.+|++.|..+. .+++|.
T Consensus 752 ~D~d----~d~iG~~~ipl~~L~~G~---r~v~L~ 779 (799)
T 2zkm_X 752 MEEG----NKFLGHRIIPINALNSGY---HHLCLH 779 (799)
T ss_dssp EETT----TEEEEEEEEEGGGBCCEE---EEEEEE
T ss_pred EEeC----CCccceEeeehhhcCCCc---EEEecc
Confidence 9996 799999999999998652 345553
No 92
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.88 E-value=6.1e-09 Score=114.03 Aligned_cols=105 Identities=15% Similarity=0.171 Sum_probs=84.2
Q ss_pred EEEEEeeecCCCCCCCCCCEEEEEEcC------eEEEeecccC-CCCCccCc-eEEEE-eeCCCCCCeEEEEEEEccCCc
Q 038990 388 GKATEYGAKDLEGKHHNNPYAVVICRG------EQKKTKMIKK-CRDPIWNE-EFQFD-FEEAPLKEKIHIEVKSKRRGL 458 (505)
Q Consensus 388 a~v~v~~a~~L~~~~~~dpyv~v~~~~------~~~kT~v~~~-t~nP~wne-~f~f~-v~~~~~~~~l~i~V~d~~~~~ 458 (505)
.+|+|++|++|+.. .+||||++.+.+ .+++|+++++ +.||+||| +|.|. +..+.. ..|.|+|||++
T Consensus 727 L~V~Visaq~L~~~-~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pel-a~Lrf~V~D~d--- 801 (885)
T 3ohm_B 727 LRVKVISGQFLSDR-KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTL-ASLRIAAFEEG--- 801 (885)
T ss_dssp EEEEEEEEESCCSS-CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGG-CEEEEEEEETT---
T ss_pred EEEEEEEeccCccc-CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCc-CEEEEEEEcCC---
Confidence 38999999999874 799999999965 2469999986 59999999 69998 765533 48999999985
Q ss_pred cCCCCCccEEEEEeccccccCCEEeEEEEeCCCC-----CceEEEEEEEEe
Q 038990 459 RLRSKESLGYVDINLHDVLHNGRLKEKYHLINSK-----NGAVQVEIKWKA 504 (505)
Q Consensus 459 ~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~-----~G~i~l~~~~~~ 504 (505)
+++||++.++|+.|..+. ++.+|.+.. .|.|.|.+..+.
T Consensus 802 ----ddfiG~~~lpL~~L~~Gy---R~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 802 ----GKFVGHRILPVSAIRSGY---HYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp ----TEEEEEEEEETTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred ----ccEEeeEEEEHHHcCCCc---eEEEecCCCCCccCceEEEEEEEEEe
Confidence 589999999999987643 568887653 467888877663
No 93
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.87 E-value=1e-08 Score=111.68 Aligned_cols=104 Identities=23% Similarity=0.233 Sum_probs=83.6
Q ss_pred EEEEEeeecCCCCCCCCCCEEEEEEcC-------eEEEeecccC-CCCCccCce-EEEE-eeCCCCCCeEEEEEEEccCC
Q 038990 388 GKATEYGAKDLEGKHHNNPYAVVICRG-------EQKKTKMIKK-CRDPIWNEE-FQFD-FEEAPLKEKIHIEVKSKRRG 457 (505)
Q Consensus 388 a~v~v~~a~~L~~~~~~dpyv~v~~~~-------~~~kT~v~~~-t~nP~wne~-f~f~-v~~~~~~~~l~i~V~d~~~~ 457 (505)
.+|+|++|++|+. ..+||||++.+.+ ++++|+++++ +.||+|||+ |+|. +..+.+ ..|.|+|+|++
T Consensus 652 L~V~Visaq~L~~-~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pel-a~Lrf~V~D~d-- 727 (816)
T 3qr0_A 652 IEIKIISAQFLSD-KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDL-AVVRIIVSEEN-- 727 (816)
T ss_dssp EEEEEEEEECCCS-SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGG-CEEEEEEEETT--
T ss_pred EEEEEEEcccCCC-CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCc-cEEEEEEEecC--
Confidence 4899999999986 4799999999975 4569999986 699999997 9998 766533 48999999974
Q ss_pred ccCCCCCccEEEEEeccccccCCEEeEEEEeCCCC-----CceEEEEEEEE
Q 038990 458 LRLRSKESLGYVDINLHDVLHNGRLKEKYHLINSK-----NGAVQVEIKWK 503 (505)
Q Consensus 458 ~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~-----~G~i~l~~~~~ 503 (505)
++++|++.++|+.|..+. ++.+|.+.. .+.|.|.+..+
T Consensus 728 -----ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 728 -----GKFIGHRVMPLDGIKPGY---RHVPLRNESNRPLGLASVFAHIVAK 770 (816)
T ss_dssp -----SCEEEEEEEESTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred -----CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCCCceEEEEEEEEE
Confidence 589999999999987653 578887753 25666666554
No 94
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.86 E-value=9.5e-09 Score=112.46 Aligned_cols=104 Identities=19% Similarity=0.226 Sum_probs=82.5
Q ss_pred EEEEEeeecCCCCCCCCCCEEEEEEcC------eEEEee-cccC-CCCCccCc-eEEE-EeeCCCCCCeEEEEEEEccCC
Q 038990 388 GKATEYGAKDLEGKHHNNPYAVVICRG------EQKKTK-MIKK-CRDPIWNE-EFQF-DFEEAPLKEKIHIEVKSKRRG 457 (505)
Q Consensus 388 a~v~v~~a~~L~~~~~~dpyv~v~~~~------~~~kT~-v~~~-t~nP~wne-~f~f-~v~~~~~~~~l~i~V~d~~~~ 457 (505)
.+|.|++|++|+. +.+||||++.+.+ +++||+ ++++ +.||+||| +|+| .+..+.+ ..|.|+|+|++
T Consensus 680 L~V~Visa~~L~~-~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el-~~Lr~~V~D~d-- 755 (799)
T 2zkm_X 680 LSITVISGQFLSE-RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPEL-ASLRVAVMEEG-- 755 (799)
T ss_dssp EEEEEEEEESCCS-SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGG-CEEEEEEEETT--
T ss_pred EEEEEEeccccCc-cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCc-cEEEEEEEEeC--
Confidence 4899999999986 5799999999954 246899 8875 69999999 6999 8876543 38999999985
Q ss_pred ccCCCCCccEEEEEeccccccCCEEeEEEEeCCCC-----CceEEEEEEEE
Q 038990 458 LRLRSKESLGYVDINLHDVLHNGRLKEKYHLINSK-----NGAVQVEIKWK 503 (505)
Q Consensus 458 ~~~~~d~~lG~~~i~L~~l~~~~~~~~~~~L~~~~-----~G~i~l~~~~~ 503 (505)
+++||++.++|+.|..+ .++++|.+.. .+.|.|.++++
T Consensus 756 -----~d~iG~~~ipl~~L~~G---~r~v~L~~~~g~~~~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 756 -----NKFLGHRIIPINALNSG---YHHLCLHSESNMPLTMPALFIFLEMK 798 (799)
T ss_dssp -----TEEEEEEEEEGGGBCCE---EEEEEEECTTCCEEEEEEEEEEEEEE
T ss_pred -----CCccceEeeehhhcCCC---cEEEeccCCCCCCCCceEEEEEEEEE
Confidence 58999999999998754 3678887643 35566666654
No 95
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.84 E-value=3.1e-08 Score=80.93 Aligned_cols=89 Identities=20% Similarity=0.291 Sum_probs=74.4
Q ss_pred CCCCEEEEEEcCeE----EEe-ecccCCCCCccCceEEEEeeCCCCCCeEEEEEEEccCCccCCCCCccEEEEEeccccc
Q 038990 403 HNNPYAVVICRGEQ----KKT-KMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRGLRLRSKESLGYVDINLHDVL 477 (505)
Q Consensus 403 ~~dpyv~v~~~~~~----~kT-~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~~~~~~d~~lG~~~i~L~~l~ 477 (505)
..||||.+.+.... .+| ...++|..|+||++|.-.+.+. +.|.|.|++.. .++++.+++++.+|.
T Consensus 26 ~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~G---r~l~i~Vfh~a-------~~fvAn~tV~~edL~ 95 (126)
T 1yrk_A 26 ANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEG---RVIQIVLMRAA-------EEPVSEVTVGVSVLA 95 (126)
T ss_dssp SCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCTT---CEEEEEEEEET-------TEEEEEEEEEHHHHH
T ss_pred cCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeCC---EEEEEEEEcCC-------CCeeeEEEEEHHHHH
Confidence 68999999986543 144 7777899999999999999875 78999999765 289999999999999
Q ss_pred c-----CCEEeEEEEeCCCCCceEEEEEEEE
Q 038990 478 H-----NGRLKEKYHLINSKNGAVQVEIKWK 503 (505)
Q Consensus 478 ~-----~~~~~~~~~L~~~~~G~i~l~~~~~ 503 (505)
+ +...+-|.+|+ ++|+|++.++|-
T Consensus 96 ~~c~~~~g~~e~WvdLe--P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 96 ERCKKNNGKAEFWLDLQ--PQAKVLMSVQYF 124 (126)
T ss_dssp HHHHTTTTEEEEEEECB--SSCEEEEEEEEE
T ss_pred hhhccCCCceEEEEecc--cCcEEEEEEEEe
Confidence 4 34668899997 489999999984
No 96
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.75 E-value=4.8e-08 Score=80.82 Aligned_cols=104 Identities=15% Similarity=0.221 Sum_probs=80.5
Q ss_pred EEEEEeeecC--CCC--CCCCCCEEEEEEcCeE----EEe-ecccCCCCCccCceEEEEeeCCCCCCeEEEEEEEccCCc
Q 038990 388 GKATEYGAKD--LEG--KHHNNPYAVVICRGEQ----KKT-KMIKKCRDPIWNEEFQFDFEEAPLKEKIHIEVKSKRRGL 458 (505)
Q Consensus 388 a~v~v~~a~~--L~~--~~~~dpyv~v~~~~~~----~kT-~v~~~t~nP~wne~f~f~v~~~~~~~~l~i~V~d~~~~~ 458 (505)
.+|...++.- +.. ....||||.+.+.... .+| ...++|..|+||++|.-.+.+. +.|.|.|++..
T Consensus 12 lRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~G---r~l~i~Vfh~a--- 85 (138)
T 2enj_A 12 LRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINKG---RVMQIIVKGKN--- 85 (138)
T ss_dssp EEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCSS---CEEEEEEECSS---
T ss_pred eEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEECC---eEEEEEEEcCC---
Confidence 3566555443 221 2369999999986542 366 6677799999999999999875 78999999654
Q ss_pred cCCCCCccEEEEEeccccccC-----CEEeEEEEeCCCCCceEEEEEEEE
Q 038990 459 RLRSKESLGYVDINLHDVLHN-----GRLKEKYHLINSKNGAVQVEIKWK 503 (505)
Q Consensus 459 ~~~~d~~lG~~~i~L~~l~~~-----~~~~~~~~L~~~~~G~i~l~~~~~ 503 (505)
.++++.+++++.+|.++ ...+-|.+|+- +|+|++.++|.
T Consensus 86 ----~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP--~Gkl~v~i~~~ 129 (138)
T 2enj_A 86 ----VDLISETTVELYSLAERCRKNNGKTEIWLELKP--QGRMLMNARYF 129 (138)
T ss_dssp ----CSCCEEEEEESHHHHHHHHHTTTCEEEEEECBS--SCEEEEEEEEC
T ss_pred ----CCeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEEE
Confidence 28999999999999953 46688999974 89999999984
No 97
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.59 E-value=2.8e-07 Score=75.26 Aligned_cols=102 Identities=20% Similarity=0.230 Sum_probs=75.1
Q ss_pred eEEEEEEEeeccCccccCCCCCCCcEEEEEECCeecc-eeee-eeeCCCCCCeEceeEEEEeecCCCCEEEEEEEEcCCC
Q 038990 261 VGILHVKVIRAIRLLKMDIFGASDPYVQLSLSGERIP-AKKT-SVKMKTLNPEWNEDFKLTVKDPETQVLQLHVYDWEKV 338 (505)
Q Consensus 261 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~-~~~T-~~~~~t~nP~wne~f~~~v~~~~~~~L~v~v~d~d~~ 338 (505)
.+-|+|.+.++.--+-+......||||.+.++..... ..+| ..+++|..|.|||+|.-.+++ .+.|.+.|++...
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a~- 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE--GRVIQIVLMRAAE- 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT--TCEEEEEEEEETT-
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC--CEEEEEEEEcCCC-
Confidence 4567888765543221222235799999999754422 2355 778889999999999999865 5789999997653
Q ss_pred CCCcccEEEEEECccCC-----CCCeeEEEEeccc
Q 038990 339 GTHDKLGMQVVPLRSLT-----PNETKELTLDLVK 368 (505)
Q Consensus 339 ~~d~~lG~~~i~l~~l~-----~~~~~~~~l~l~~ 368 (505)
+++..|.+++++|. .+...+.|++|.+
T Consensus 82 ---~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP 113 (126)
T 1yrk_A 82 ---EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP 113 (126)
T ss_dssp ---EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS
T ss_pred ---CeeeEEEEEHHHHHhhhccCCCceEEEEeccc
Confidence 89999999999988 4456689998754
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.50 E-value=4.3e-07 Score=75.18 Aligned_cols=103 Identities=20% Similarity=0.197 Sum_probs=76.5
Q ss_pred CeEEEEEEEeeccCccccC-CCCCCCcEEEEEECCeec-ceeee-eeeCCCCCCeEceeEEEEeecCCCCEEEEEEEEcC
Q 038990 260 PVGILHVKVIRAIRLLKMD-IFGASDPYVQLSLSGERI-PAKKT-SVKMKTLNPEWNEDFKLTVKDPETQVLQLHVYDWE 336 (505)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d-~~g~~dpyv~v~l~~~~~-~~~~T-~~~~~t~nP~wne~f~~~v~~~~~~~L~v~v~d~d 336 (505)
..+-|+|.+.++.-.+-+. .....||||.+.++.... ...+| ..+++|..|.|||+|.-.+++ .+.|.+.|++..
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~--Gr~l~i~Vfh~a 85 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK--GRVMQIIVKGKN 85 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS--SCEEEEEEECSS
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC--CeEEEEEEEcCC
Confidence 4567888886665433222 123579999999986533 23566 777889999999999998865 578999999654
Q ss_pred CCCCCcccEEEEEECccCC-----CCCeeEEEEeccc
Q 038990 337 KVGTHDKLGMQVVPLRSLT-----PNETKELTLDLVK 368 (505)
Q Consensus 337 ~~~~d~~lG~~~i~l~~l~-----~~~~~~~~l~l~~ 368 (505)
. +++..|.+++.+|. .+...++|++|.+
T Consensus 86 ~----~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP 118 (138)
T 2enj_A 86 V----DLISETTVELYSLAERCRKNNGKTEIWLELKP 118 (138)
T ss_dssp C----SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS
T ss_pred C----CeeeEEEEEHHHHHhhhccCCCceEEEEeccc
Confidence 3 89999999999998 4456689998754
No 99
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=90.95 E-value=2.8 Score=37.76 Aligned_cols=57 Identities=14% Similarity=0.240 Sum_probs=42.2
Q ss_pred ceeeeeeeCCCCCCeEceeEEEEeecC--CCCEEEEEEEEcCCC----CCCcccEEEEEECcc
Q 038990 297 PAKKTSVKMKTLNPEWNEDFKLTVKDP--ETQVLQLHVYDWEKV----GTHDKLGMQVVPLRS 353 (505)
Q Consensus 297 ~~~~T~~~~~t~nP~wne~f~~~v~~~--~~~~L~v~v~d~d~~----~~d~~lG~~~i~l~~ 353 (505)
...+|.+...+.+|.|+|++.+.+... ....|.|++++...- ..+..+|.+-+||-.
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 346888888899999999999998643 356899999876421 122468888888753
No 100
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=89.53 E-value=2.8 Score=46.84 Aligned_cols=106 Identities=21% Similarity=0.239 Sum_probs=68.3
Q ss_pred eEEEEEEEeeccCccccCCCCCCCcEEEEEE--CCeecc-eeeeeeeCCCCCCeEceeEEEEee---cCCCCEEEEEEEE
Q 038990 261 VGILHVKVIRAIRLLKMDIFGASDPYVQLSL--SGERIP-AKKTSVKMKTLNPEWNEDFKLTVK---DPETQVLQLHVYD 334 (505)
Q Consensus 261 ~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l--~~~~~~-~~~T~~~~~t~nP~wne~f~~~v~---~~~~~~L~v~v~d 334 (505)
...++|+|.++.++.... ....+-||.+.+ |+...- ..+|+. ....+|.|||...|.+. -|....|.++||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~-~~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQR-VPCSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCC-CCTTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccc-cCCCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 357899999998886433 234577888766 444331 123443 33568889999998876 2457889999998
Q ss_pred cCCC----CCCcccEEEEEECccCCCC-CeeEEEEeccc
Q 038990 335 WEKV----GTHDKLGMQVVPLRSLTPN-ETKELTLDLVK 368 (505)
Q Consensus 335 ~d~~----~~d~~lG~~~i~l~~l~~~-~~~~~~l~l~~ 368 (505)
.... ..+..+|.+.++|-+-... ....+.+.+++
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~~~L~~G~~~L~lW~ 470 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLWP 470 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTTCBBCCEEEEEECEE
T ss_pred ecCccCcccccceeEEeeeeeEccCCeEEcCCeEEEeec
Confidence 7542 1345899999999765533 12345566664
No 101
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=89.43 E-value=1.6 Score=48.27 Aligned_cols=106 Identities=14% Similarity=0.116 Sum_probs=68.0
Q ss_pred CeEEEEEEEeeccCccccCCCCCCCcEEEEEE--CCeecc-eeeeeeeCCCCCCeEceeEEEEee---cCCCCEEEEEEE
Q 038990 260 PVGILHVKVIRAIRLLKMDIFGASDPYVQLSL--SGERIP-AKKTSVKMKTLNPEWNEDFKLTVK---DPETQVLQLHVY 333 (505)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l--~~~~~~-~~~T~~~~~t~nP~wne~f~~~v~---~~~~~~L~v~v~ 333 (505)
-...++|+|.++.++... ..++-||.+.+ |+.... ...|+.+....+|.|||.+.|.+. -|....|.+++|
T Consensus 215 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp CCSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred cCCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 346889999999998654 34677877654 554432 234544555778999999998876 245788999999
Q ss_pred EcCCC--C----------CCcccEEEEEECccCCCCC-eeEEEEeccc
Q 038990 334 DWEKV--G----------THDKLGMQVVPLRSLTPNE-TKELTLDLVK 368 (505)
Q Consensus 334 d~d~~--~----------~d~~lG~~~i~l~~l~~~~-~~~~~l~l~~ 368 (505)
+.... + .+..+|.+.+++-+-...- .....+.++.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw~ 339 (940)
T 2wxf_A 292 AVVEKAKKARSTKKKSKKADCPIAWANLMLFDYKDQLKTGERCLYMWP 339 (940)
T ss_dssp EEC----------------CEEEEEEEEESBCTTSBBCCEEEEEECEE
T ss_pred EecCCccCccccccccccccceEEEEeeeEECCcCccccCCEEEEEee
Confidence 96432 1 2458999999987644321 2234555554
No 102
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=87.01 E-value=1.6 Score=36.98 Aligned_cols=111 Identities=18% Similarity=0.257 Sum_probs=74.8
Q ss_pred eEEEEEeeecCCCC-----CCCCCCEEEEEEc--C-eEEEeecccCCCCCccCceEEEEeeCCCC------CCeEEEEEE
Q 038990 387 VGKATEYGAKDLEG-----KHHNNPYAVVICR--G-EQKKTKMIKKCRDPIWNEEFQFDFEEAPL------KEKIHIEVK 452 (505)
Q Consensus 387 ~a~v~v~~a~~L~~-----~~~~dpyv~v~~~--~-~~~kT~v~~~t~nP~wne~f~f~v~~~~~------~~~l~i~V~ 452 (505)
+-++.|.++. +.. .+..+|+.-+.+. . +.+.|.++. ..+|.+|-+-.|.+..... ...+.+++.
T Consensus 19 lfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELh 96 (156)
T 2yrb_A 19 LFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVH 96 (156)
T ss_dssp EEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEE
T ss_pred EEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEE
Confidence 3467777665 221 1345675555543 3 445666665 7899999999999864311 237888888
Q ss_pred EccCCccCCCCCccEEEEEeccccccCC-EEeEEEEeCCCC-----CceEEEEEEEE
Q 038990 453 SKRRGLRLRSKESLGYVDINLHDVLHNG-RLKEKYHLINSK-----NGAVQVEIKWK 503 (505)
Q Consensus 453 d~~~~~~~~~d~~lG~~~i~L~~l~~~~-~~~~~~~L~~~~-----~G~i~l~~~~~ 503 (505)
... ...-..+|.+.|+|.++++.. .+...-+|.+.. -|.|...++++
T Consensus 97 qa~----g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~ 149 (156)
T 2yrb_A 97 QAY----STEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLR 149 (156)
T ss_dssp EEC----SSCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEE
T ss_pred Eee----CCCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEe
Confidence 764 335579999999999999754 456666776532 47888888776
No 103
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=84.63 E-value=3.4 Score=45.78 Aligned_cols=106 Identities=18% Similarity=0.121 Sum_probs=65.0
Q ss_pred EEEEEEEeeccCccccCCCCCCCcEEEEEE--CCeecceeeeeeeCCCCCCeEceeEEEEee---cCCCCEEEEEEEEcC
Q 038990 262 GILHVKVIRAIRLLKMDIFGASDPYVQLSL--SGERIPAKKTSVKMKTLNPEWNEDFKLTVK---DPETQVLQLHVYDWE 336 (505)
Q Consensus 262 g~L~V~v~~a~~L~~~d~~g~~dpyv~v~l--~~~~~~~~~T~~~~~t~nP~wne~f~~~v~---~~~~~~L~v~v~d~d 336 (505)
..++|+|.++....... +..++-||.+.+ |+......+|..+.-+.+|.|||.+.|.+. -|....|.+++|+..
T Consensus 218 ~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 46788888775422111 124567877643 655443345555555678999999888775 245788999999864
Q ss_pred CCC----------------CCcccEEEEEECccCCCCC-eeEEEEeccc
Q 038990 337 KVG----------------THDKLGMQVVPLRSLTPNE-TKELTLDLVK 368 (505)
Q Consensus 337 ~~~----------------~d~~lG~~~i~l~~l~~~~-~~~~~l~l~~ 368 (505)
..+ +...+|.+.++|-+-...- ...+.+.+++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~~l~~G~~~L~lw~ 345 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRFLLRHGEYVLHMWQ 345 (961)
T ss_dssp C--------------------CEEEEEEEESBCTTSBBCCEEEEEECEE
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCCCccccCCEEEEEee
Confidence 221 3457999999987655331 2235556655
No 104
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=83.18 E-value=2.1 Score=47.45 Aligned_cols=92 Identities=10% Similarity=0.243 Sum_probs=61.2
Q ss_pred ceEEEEEeeecCCCCCCCCCCEEEEEE--cCeE----EEeecccCCCCCccCceEEEEee--CCCCCCeEEEEEEEccCC
Q 038990 386 EVGKATEYGAKDLEGKHHNNPYAVVIC--RGEQ----KKTKMIKKCRDPIWNEEFQFDFE--EAPLKEKIHIEVKSKRRG 457 (505)
Q Consensus 386 ~~a~v~v~~a~~L~~~~~~dpyv~v~~--~~~~----~kT~v~~~t~nP~wne~f~f~v~--~~~~~~~l~i~V~d~~~~ 457 (505)
+-..|+|.++.++......+-||++.+ |++. ..|+.+....+|.|||-.+|.+. +.+.+..|.++||+....
T Consensus 217 ~~f~i~i~~~~~~~~~~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~ 296 (940)
T 2wxf_A 217 QPFSIELIEGRKVNADERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAVVEK 296 (940)
T ss_dssp SEEEEEEEEEECCCC---CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEEC--
T ss_pred CceEEEEEEecccCCCCCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEecCC
Confidence 334889999999877666777887765 4432 35665666788999998777764 555667999999985310
Q ss_pred --c-------cCCCCCccEEEEEeccccc
Q 038990 458 --L-------RLRSKESLGYVDINLHDVL 477 (505)
Q Consensus 458 --~-------~~~~d~~lG~~~i~L~~l~ 477 (505)
. .-.....+|.++++|.+-.
T Consensus 297 ~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 297 AKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp --------------CEEEEEEEEESBCTT
T ss_pred ccCccccccccccccceEEEEeeeEECCc
Confidence 0 0012459999999998744
No 105
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=77.91 E-value=3.7 Score=46.09 Aligned_cols=106 Identities=13% Similarity=0.116 Sum_probs=65.7
Q ss_pred CeEEEEEEEeeccCccccCCCCCCCcEEE--EEECCeecc-eeeeeeeCCCCCCeEceeEEEEee---cCCCCEEEEEEE
Q 038990 260 PVGILHVKVIRAIRLLKMDIFGASDPYVQ--LSLSGERIP-AKKTSVKMKTLNPEWNEDFKLTVK---DPETQVLQLHVY 333 (505)
Q Consensus 260 ~~g~L~V~v~~a~~L~~~d~~g~~dpyv~--v~l~~~~~~-~~~T~~~~~t~nP~wne~f~~~v~---~~~~~~L~v~v~ 333 (505)
-...++|+|.++.++... ..++-||. ++-|+.... ..+|+.+....+|.|||.+.|.+. -|....|.+++|
T Consensus 351 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~ 427 (1092)
T 2y3a_A 351 NNNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVY 427 (1092)
T ss_dssp CCSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECC
T ss_pred cCCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEE
Confidence 346899999999998754 24567776 445665542 234555555778999999988876 245778999999
Q ss_pred EcCCC----------------------CCCcccEEEEEECccCCCCC-eeEEEEeccc
Q 038990 334 DWEKV----------------------GTHDKLGMQVVPLRSLTPNE-TKELTLDLVK 368 (505)
Q Consensus 334 d~d~~----------------------~~d~~lG~~~i~l~~l~~~~-~~~~~l~l~~ 368 (505)
+.... +.+..+|.+.+++-+-...- .....+.++.
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~~~l~~G~~~l~lw~ 485 (1092)
T 2y3a_A 428 AVLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFKGQLRSGDVILHSWS 485 (1092)
T ss_dssp CC------------------------------CCEEEEESBCTTCBBCCEEEECCCCT
T ss_pred EecCccccccccccccccccccccccccccceeEEEeeeeECCcCcccCCCeEEEEee
Confidence 86311 11237888888886544321 2234455554
No 106
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=73.77 E-value=8.2 Score=43.20 Aligned_cols=90 Identities=20% Similarity=0.309 Sum_probs=58.9
Q ss_pred EEEEEeeecCCCCC--CCCCCEEEEEEc--Ce----EEEeecccCCCCCccCceEEEEee--CCCCCCeEEEEEEEccCC
Q 038990 388 GKATEYGAKDLEGK--HHNNPYAVVICR--GE----QKKTKMIKKCRDPIWNEEFQFDFE--EAPLKEKIHIEVKSKRRG 457 (505)
Q Consensus 388 a~v~v~~a~~L~~~--~~~dpyv~v~~~--~~----~~kT~v~~~t~nP~wne~f~f~v~--~~~~~~~l~i~V~d~~~~ 457 (505)
-.|+|.++.+++.. ...+-||++.+- ++ ..+|+.+. ..+|.|||-.+|.+. +.+....|.++||+....
T Consensus 357 f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~~~~ 435 (1091)
T 3hhm_A 357 LRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICSVKGR 435 (1091)
T ss_dssp EEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECCCCCC
T ss_pred EEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEEecCc
Confidence 48999999888643 356788888773 32 23444333 567889997777764 555667999999986521
Q ss_pred ccC-CCCCccEEEEEecccccc
Q 038990 458 LRL-RSKESLGYVDINLHDVLH 478 (505)
Q Consensus 458 ~~~-~~d~~lG~~~i~L~~l~~ 478 (505)
... .....||.++++|.+-..
T Consensus 436 ~~~~~~~~~lg~~n~~lfd~~~ 457 (1091)
T 3hhm_A 436 KGAKEEHCPLAWGNINLFDYTD 457 (1091)
T ss_dssp C-------CCEEEEEESBCTTC
T ss_pred cCcccccceeEEeeeeeEccCC
Confidence 000 124589999999987543
No 107
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=73.02 E-value=5.3 Score=44.83 Aligned_cols=90 Identities=17% Similarity=0.197 Sum_probs=59.5
Q ss_pred EEEEEeeecCCCCCCCCCCEEEEE--EcCeE----EEeecccCCCCCccCceEEEEee--CCCCCCeEEEEEEEccCCc-
Q 038990 388 GKATEYGAKDLEGKHHNNPYAVVI--CRGEQ----KKTKMIKKCRDPIWNEEFQFDFE--EAPLKEKIHIEVKSKRRGL- 458 (505)
Q Consensus 388 a~v~v~~a~~L~~~~~~dpyv~v~--~~~~~----~kT~v~~~t~nP~wne~f~f~v~--~~~~~~~l~i~V~d~~~~~- 458 (505)
-.|+|..+.++......+-||++. .|++. ..|+.+..+.+|.|||-.+|.+. +.+.+..|.|+||+....-
T Consensus 355 f~i~i~~~~~~~~~~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~~~~~~~ 434 (1092)
T 2y3a_A 355 FQITLVKGNKLNTEETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYAVLDKVK 434 (1092)
T ss_dssp EEEEECCCCCCCCCSSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCCC-----
T ss_pred EEEEEEEeccCCCCCCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEEecCccc
Confidence 489999999998766677787754 45543 35665555788999998777765 4455668999999852100
Q ss_pred cC------------------CCCCccEEEEEeccccc
Q 038990 459 RL------------------RSKESLGYVDINLHDVL 477 (505)
Q Consensus 459 ~~------------------~~d~~lG~~~i~L~~l~ 477 (505)
.. .....+|.++++|.+-.
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 471 (1092)
T 2y3a_A 435 TKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFK 471 (1092)
T ss_dssp -------------------------CCEEEEESBCTT
T ss_pred cccccccccccccccccccccccceeEEEeeeeECCc
Confidence 00 11348999999997744
No 108
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=72.42 E-value=8.3 Score=32.64 Aligned_cols=101 Identities=11% Similarity=0.124 Sum_probs=67.8
Q ss_pred CcCCeEEEEEEEeeccCccccC-CCCCCCcEEEEEECCeecceeeeeeeCCCCCCeEceeEEEEeecC-------CCCEE
Q 038990 257 IKKPVGILHVKVIRAIRLLKMD-IFGASDPYVQLSLSGERIPAKKTSVKMKTLNPEWNEDFKLTVKDP-------ETQVL 328 (505)
Q Consensus 257 ~~~~~g~L~V~v~~a~~L~~~d-~~g~~dpyv~v~l~~~~~~~~~T~~~~~t~nP~wne~f~~~v~~~-------~~~~L 328 (505)
...-.+.+.|+|.++.--+..- ..+..+|..-+.++=-..+.+.|.+.. ..+|.+|.+-.+.+... .+..+
T Consensus 13 l~~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 13 LERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTI 91 (156)
T ss_dssp CCSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCE
T ss_pred ccCCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCE
Confidence 3445689999998877322211 123457766665553334445677765 78999999888888522 14468
Q ss_pred EEEEEEcCCCCCCcccEEEEEECccCCCCCe
Q 038990 329 QLHVYDWEKVGTHDKLGMQVVPLRSLTPNET 359 (505)
Q Consensus 329 ~v~v~d~d~~~~d~~lG~~~i~l~~l~~~~~ 359 (505)
.++++... .+..+.+|.+.|++.++...+.
T Consensus 92 ~lELhqa~-g~~~~tla~~~I~l~~lLe~~~ 121 (156)
T 2yrb_A 92 TLEVHQAY-STEYETIAACQLKFHEILEKSG 121 (156)
T ss_dssp EEEEEEEC-SSCEEEEEEEEECCSHHHHCCS
T ss_pred EEEEEEee-CCCceEEEEEEEEhHHhhCcCC
Confidence 89998874 3456789999999999886544
No 109
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=72.17 E-value=17 Score=32.68 Aligned_cols=60 Identities=10% Similarity=0.236 Sum_probs=43.2
Q ss_pred EEEeecccCCCCCccCceEEEEeeCCCCCC-eEEEEEEEccCCc-cCCCCCccEEEEEeccc
Q 038990 416 QKKTKMIKKCRDPIWNEEFQFDFEEAPLKE-KIHIEVKSKRRGL-RLRSKESLGYVDINLHD 475 (505)
Q Consensus 416 ~~kT~v~~~t~nP~wne~f~f~v~~~~~~~-~l~i~V~d~~~~~-~~~~d~~lG~~~i~L~~ 475 (505)
..+|.+.+.+.+|.|+|++...++...... .|.+++++..... ....+..+|...++|-+
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 458889999999999999999997653333 7889988654310 01234578999999853
No 110
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=69.22 E-value=11 Score=41.77 Aligned_cols=90 Identities=13% Similarity=0.172 Sum_probs=55.4
Q ss_pred EEEEeeecC--CCCCCCCCCEEEEEE--cCeE---EEeecccCCCCCccCceEEEEee--CCCCCCeEEEEEEEccCCcc
Q 038990 389 KATEYGAKD--LEGKHHNNPYAVVIC--RGEQ---KKTKMIKKCRDPIWNEEFQFDFE--EAPLKEKIHIEVKSKRRGLR 459 (505)
Q Consensus 389 ~v~v~~a~~--L~~~~~~dpyv~v~~--~~~~---~kT~v~~~t~nP~wne~f~f~v~--~~~~~~~l~i~V~d~~~~~~ 459 (505)
.|.|.++.. ++.+...+-||++.+ |++. .+|..+.-+.+|.|||-.+|.+. +.+.+..|.++||+......
T Consensus 221 ~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~ 300 (961)
T 1e7u_A 221 RVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAKPAL 300 (961)
T ss_dssp EEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC---
T ss_pred EEEEeecccccccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecccCcc
Confidence 566666653 233334566777644 4443 25555555778999998777664 55666799999997532100
Q ss_pred -------------CCCCCccEEEEEecccccc
Q 038990 460 -------------LRSKESLGYVDINLHDVLH 478 (505)
Q Consensus 460 -------------~~~d~~lG~~~i~L~~l~~ 478 (505)
-.....+|.++++|.+-..
T Consensus 301 ~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~ 332 (961)
T 1e7u_A 301 SGKTSAEMPSPESKGKAQLLYYVNLLLIDHRF 332 (961)
T ss_dssp -----------------CEEEEEEEESBCTTS
T ss_pred ccccccccccccccccceeEEEEeeeeecCCC
Confidence 0124589999999987543
No 111
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=24.05 E-value=14 Score=23.92 Aligned_cols=8 Identities=0% Similarity=-0.230 Sum_probs=3.5
Q ss_pred eeeecccc
Q 038990 28 FVHSDATE 35 (505)
Q Consensus 28 ~~~~~~~~ 35 (505)
|+|++.++
T Consensus 32 ~~~~RRr~ 39 (44)
T 2ks1_B 32 GLFMRRRH 39 (44)
T ss_dssp HHHHHTTT
T ss_pred HHHhhhhH
Confidence 44554333
No 112
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=20.23 E-value=19 Score=23.30 Aligned_cols=8 Identities=13% Similarity=-0.110 Sum_probs=3.5
Q ss_pred eeeecccc
Q 038990 28 FVHSDATE 35 (505)
Q Consensus 28 ~~~~~~~~ 35 (505)
|+|++.++
T Consensus 31 ~~~~RRRr 38 (44)
T 2l2t_A 31 AVYVRRKS 38 (44)
T ss_dssp HHHHHTTC
T ss_pred HHHhhhhh
Confidence 44554333
Done!