Query 038993
Match_columns 327
No_of_seqs 188 out of 1380
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 08:25:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038993.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/038993hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2e31_A FBS1, F-box only protei 99.2 6.6E-12 2.2E-16 110.1 3.8 51 1-51 48-99 (297)
2 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 1.1E-11 3.7E-16 80.5 2.2 45 2-46 7-51 (53)
3 4asc_A Kelch repeat and BTB do 98.9 2.5E-07 8.5E-12 82.4 21.5 156 114-289 68-231 (315)
4 3ii7_A Kelch-like protein 7; p 98.8 5.8E-07 2E-11 79.5 20.9 204 98-323 52-272 (306)
5 2xn4_A Kelch-like protein 2; s 98.8 3.4E-07 1.2E-11 80.8 18.7 203 98-323 58-276 (302)
6 2woz_A Kelch repeat and BTB do 98.8 1E-06 3.5E-11 78.5 21.6 155 114-289 79-241 (318)
7 2vpj_A Kelch-like protein 12; 98.8 4E-07 1.4E-11 80.3 18.3 189 112-323 77-278 (301)
8 1zgk_A Kelch-like ECH-associat 98.7 6.7E-07 2.3E-11 79.3 16.6 153 113-288 90-249 (308)
9 3ii7_A Kelch-like protein 7; p 98.6 9.7E-07 3.3E-11 78.0 16.3 155 112-288 23-187 (306)
10 2ovr_B FBW7, F-BOX/WD repeat p 98.6 2E-05 7E-10 73.0 25.2 51 1-51 16-66 (445)
11 2xn4_A Kelch-like protein 2; s 98.6 1E-06 3.5E-11 77.7 15.2 190 113-323 30-229 (302)
12 4asc_A Kelch repeat and BTB do 98.6 1.8E-06 6.2E-11 76.7 16.9 154 112-285 116-283 (315)
13 2vpj_A Kelch-like protein 12; 98.6 1.9E-06 6.4E-11 75.9 16.5 154 112-288 30-193 (301)
14 1zgk_A Kelch-like ECH-associat 98.6 3.2E-06 1.1E-10 74.9 17.4 170 98-290 118-298 (308)
15 2uvk_A YJHT; unknown function, 98.5 1.9E-06 6.4E-11 77.9 14.7 176 98-288 16-237 (357)
16 3v7d_B Cell division control p 98.5 4.5E-05 1.5E-09 70.9 24.2 45 4-48 15-60 (464)
17 2woz_A Kelch repeat and BTB do 98.5 6.8E-06 2.3E-10 73.1 17.4 153 113-285 127-293 (318)
18 1p22_A F-BOX/WD-repeat protein 98.3 2.5E-05 8.4E-10 72.3 15.8 47 4-50 11-61 (435)
19 3l2o_B F-box only protein 4; s 98.0 1.1E-06 3.6E-11 76.4 1.0 49 4-52 5-53 (312)
20 2zwa_A Leucine carboxyl methyl 98.0 0.00018 6.2E-09 71.1 16.9 156 112-288 411-592 (695)
21 2uvk_A YJHT; unknown function, 98.0 8.1E-05 2.8E-09 67.0 13.3 156 113-287 168-350 (357)
22 2ast_B S-phase kinase-associat 97.6 1.7E-05 6E-10 70.8 2.3 42 2-43 7-48 (336)
23 1k3i_A Galactose oxidase precu 97.4 0.0051 1.7E-07 60.2 16.4 124 96-226 248-384 (656)
24 2zwa_A Leucine carboxyl methyl 97.3 0.0051 1.7E-07 60.7 15.9 149 113-283 468-639 (695)
25 1k3i_A Galactose oxidase precu 97.1 0.0022 7.6E-08 62.7 10.7 151 115-285 168-329 (656)
26 2p1m_B Transport inhibitor res 97.1 0.00012 4.3E-09 70.4 1.3 36 2-37 4-40 (594)
27 3ogk_B Coronatine-insensitive 96.5 0.00068 2.3E-08 65.2 1.4 33 5-37 14-47 (592)
28 3nol_A Glutamine cyclotransfer 87.4 9.9 0.00034 32.3 12.2 107 194-325 50-157 (262)
29 3mbr_X Glutamine cyclotransfer 78.2 29 0.00098 29.0 13.7 106 194-324 28-134 (243)
30 3nok_A Glutaminyl cyclase; bet 73.1 42 0.0014 28.4 11.3 103 194-324 62-165 (268)
31 4gga_A P55CDC, cell division c 67.4 66 0.0023 28.4 18.9 146 93-275 107-261 (420)
32 2p4o_A Hypothetical protein; p 66.7 47 0.0016 28.0 10.4 61 195-274 41-101 (306)
33 3jro_A Fusion protein of prote 62.5 1.2E+02 0.004 29.5 15.2 144 161-324 75-239 (753)
34 2sli_A Intramolecular trans-si 58.2 1.3E+02 0.0043 29.3 12.6 82 197-288 474-555 (679)
35 1k8k_C P40, ARP2/3 complex 41 57.2 88 0.003 26.4 11.8 109 161-288 28-137 (372)
36 3jrp_A Fusion protein of prote 54.5 97 0.0033 26.1 17.2 143 162-324 78-241 (379)
37 3dsm_A Uncharacterized protein 53.4 1E+02 0.0036 26.1 11.2 135 161-324 15-162 (328)
38 1l0q_A Surface layer protein; 50.5 1.2E+02 0.0041 25.9 16.5 132 111-274 10-146 (391)
39 3hfq_A Uncharacterized protein 46.1 1.3E+02 0.0045 25.2 12.8 79 195-289 49-128 (347)
40 3fm0_A Protein CIAO1; WDR39,SG 45.2 1.4E+02 0.0048 25.3 15.8 105 162-288 82-190 (345)
41 2iwa_A Glutamine cyclotransfer 44.9 1.4E+02 0.0047 25.1 13.2 104 197-324 32-136 (266)
42 3dwl_C Actin-related protein 2 43.1 28 0.00094 30.0 4.9 110 161-289 31-142 (377)
43 3dwl_C Actin-related protein 2 42.9 1.5E+02 0.0053 25.0 11.1 50 212-274 123-176 (377)
44 2xzi_A KDNAse, extracellular s 41.1 1.4E+02 0.0048 26.4 9.4 141 165-322 205-356 (386)
45 3scy_A Hypothetical bacterial 38.7 1.8E+02 0.0061 24.6 11.6 79 195-290 220-304 (361)
46 2z2n_A Virginiamycin B lyase; 38.6 1.5E+02 0.0053 23.8 15.5 134 96-259 104-244 (299)
47 3dsm_A Uncharacterized protein 34.8 2.1E+02 0.007 24.2 20.2 120 112-258 16-148 (328)
48 2kwv_A RAD30 homolog B, DNA po 34.3 20 0.00069 21.3 1.6 16 5-20 22-37 (48)
49 1l0q_A Surface layer protein; 33.5 2.2E+02 0.0076 24.1 18.4 188 98-323 81-275 (391)
50 2qe8_A Uncharacterized protein 31.3 2.1E+02 0.0072 24.3 8.7 64 192-258 71-139 (343)
51 4ggc_A P55CDC, cell division c 30.7 2.2E+02 0.0074 23.1 17.8 25 99-129 34-58 (318)
52 2jkb_A Sialidase B; intramolec 28.5 4.1E+02 0.014 25.7 11.6 114 162-289 445-571 (686)
53 3g4e_A Regucalcin; six bladed 28.1 1.2E+02 0.0039 25.3 6.3 31 196-230 24-54 (297)
54 1ri6_A Putative isomerase YBHE 28.0 2.5E+02 0.0085 23.0 14.4 141 164-326 16-163 (343)
55 1k8k_C P40, ARP2/3 complex 41 27.3 2.7E+02 0.0092 23.2 17.8 55 111-178 28-89 (372)
56 2fp8_A Strictosidine synthase; 27.0 2.7E+02 0.0094 23.1 14.4 54 211-275 260-313 (322)
57 1rmk_A MU-O-conotoxin mrvib; b 25.5 11 0.00038 19.9 -0.5 12 96-107 16-27 (31)
58 3fvz_A Peptidyl-glycine alpha- 22.8 3.3E+02 0.011 22.7 16.5 149 101-275 154-322 (329)
59 3q7m_A Lipoprotein YFGL, BAMB; 22.5 3.5E+02 0.012 22.9 12.4 110 96-223 98-210 (376)
60 2ghs_A AGR_C_1268P; regucalcin 22.3 1.7E+02 0.0059 24.6 6.4 30 197-230 61-90 (326)
61 3q6k_A 43.2 kDa salivary prote 21.6 1.8E+02 0.006 25.9 6.3 23 211-233 123-148 (381)
62 2w18_A PALB2, fancn, partner a 20.7 1.4E+02 0.0049 26.3 5.4 34 251-292 53-86 (356)
63 2z2n_A Virginiamycin B lyase; 20.2 3.3E+02 0.011 21.7 14.9 132 96-258 146-284 (299)
No 1
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.19 E-value=6.6e-12 Score=110.12 Aligned_cols=51 Identities=24% Similarity=0.467 Sum_probs=48.0
Q ss_pred CCCCCCCcHHHHHHHHhcCCcchhh-hheeccccchhhcCChhhHHHHhhcc
Q 038993 1 MDDRDPLPLHIIDDILSRLHVKQLL-RLRCVSKTWRDLIDGPDFIKLQLSRN 51 (327)
Q Consensus 1 m~~~~~LP~Dll~eIL~rLP~ksl~-r~r~VcK~W~~li~~~~F~~~~~~~~ 51 (327)
|..+..||+||+.+||+|||+++|+ ||++|||+|+++++++.|.+.+..+.
T Consensus 48 ~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred ccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 4567899999999999999999999 99999999999999999999998876
No 2
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.15 E-value=1.1e-11 Score=80.53 Aligned_cols=45 Identities=27% Similarity=0.412 Sum_probs=39.4
Q ss_pred CCCCCCcHHHHHHHHhcCCcchhhhheeccccchhhcCChhhHHH
Q 038993 2 DDRDPLPLHIIDDILSRLHVKQLLRLRCVSKTWRDLIDGPDFIKL 46 (327)
Q Consensus 2 ~~~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~~~F~~~ 46 (327)
..+..||+|++.+||++||++++.++++|||+|+.++.++.|.+.
T Consensus 7 ~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~~ 51 (53)
T 1fs1_A 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQT 51 (53)
T ss_dssp --CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC--
T ss_pred CCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHh
Confidence 357789999999999999999999999999999999999987653
No 3
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.91 E-value=2.5e-07 Score=82.36 Aligned_cols=156 Identities=12% Similarity=0.045 Sum_probs=105.8
Q ss_pred EEEEEcCCccccceeeccccCCCCCC---CceEEEE--EEEEEEEeCCCCCCCccEEEEEEcCCCceEEcCCCCCceecC
Q 038993 114 TLAIWTHLRESTAFYRRQRLPWIPKR---LVAFFMG--LVRIARRSGDACFGGAAEVKVYSLARNSWKRIQDIPPCYIAR 188 (327)
Q Consensus 114 ~~~V~N~~~P~T~~~~~~~LP~~~~~---~~~~gfg--vv~v~~~~~~~~~~~~~~~~Vys~~~~~Wr~~~~~p~~~~~~ 188 (327)
.+.++| |.|++|. .+|+.+.. .....++ ++.+......++......+++|+..+++|+.+..+|... .
T Consensus 68 ~~~~~d---~~~~~W~--~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--~ 140 (315)
T 4asc_A 68 YFLQFD---HLDSEWL--GMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV--Y 140 (315)
T ss_dssp EEEEEE---TTTTEEE--ECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC--B
T ss_pred ceEEec---CCCCeEE--ECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc--c
Confidence 488999 9999999 99887755 2222222 444433221122355678999999999999998776543 2
Q ss_pred CCCeeeeCCcEEEEEeecC--CCccEEEEEeCCCceeeee-cCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCcCC
Q 038993 189 DSPGVYASGSLHWIVMAEY--GRHDFILALDLSDEAYKEL-PLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGYRT 265 (327)
Q Consensus 189 ~~~~v~~~G~lywl~~~~~--~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~ 265 (327)
....+.++|.+|.++.... .....+..||+.+.+|+.+ ++|... ... ..+.++ |+|+++...... .
T Consensus 141 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~---~~~~~~-~~iyv~GG~~~~--~ 209 (315)
T 4asc_A 141 GHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTAR-----SLF---GATVHD-GRIIVAAGVTDT--G 209 (315)
T ss_dssp SCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCC-----BSC---EEEEET-TEEEEEEEECSS--S
T ss_pred ceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCch-----hce---EEEEEC-CEEEEEeccCCC--C
Confidence 3346778999999987622 2335699999999999988 455432 122 556777 999999987543 1
Q ss_pred CeEEEEEEeeCCCCCCeEEEEEEc
Q 038993 266 PLSHVWVMTEYGVKDSWTKLFSIL 289 (327)
Q Consensus 266 ~~l~iW~l~~~~~~~~W~~~~~i~ 289 (327)
..-++|+++-. ..+|+++..++
T Consensus 210 ~~~~~~~yd~~--~~~W~~~~~~p 231 (315)
T 4asc_A 210 LTSSAEVYSIT--DNKWAPFEAFP 231 (315)
T ss_dssp EEEEEEEEETT--TTEEEEECCCS
T ss_pred ccceEEEEECC--CCeEEECCCCC
Confidence 24477887652 36899885433
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.83 E-value=5.8e-07 Score=79.48 Aligned_cols=204 Identities=10% Similarity=0.020 Sum_probs=122.7
Q ss_pred eccCCcEEeeec---CCCCEEEEEcCCccccceeeccccCCCCCC---CceEEEE--EEEEEEEeCCCCCCCccEEEEEE
Q 038993 98 GCCNGLLCIATN---RLPQTLAIWTHLRESTAFYRRQRLPWIPKR---LVAFFMG--LVRIARRSGDACFGGAAEVKVYS 169 (327)
Q Consensus 98 ~sc~GLlcl~~~---~~~~~~~V~N~~~P~T~~~~~~~LP~~~~~---~~~~gfg--vv~v~~~~~~~~~~~~~~~~Vys 169 (327)
...+|.|.+... .....+.++| |.|++|. .+|+++.. .....++ ++.+.... ........+++|+
T Consensus 52 ~~~~~~lyv~GG~~~~~~~~~~~~d---~~~~~W~--~~~~~p~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~~~d 124 (306)
T 3ii7_A 52 VFWDNVVYILGGSQLFPIKRMDCYN---VVKDSWY--SKLGPPTPRDSLAACAAEGKIYTSGGSE--VGNSALYLFECYD 124 (306)
T ss_dssp EEETTEEEEECCBSSSBCCEEEEEE---TTTTEEE--EEECCSSCCBSCEEEEETTEEEEECCBB--TTBSCCCCEEEEE
T ss_pred EEECCEEEEEeCCCCCCcceEEEEe---CCCCeEE--ECCCCCccccceeEEEECCEEEEECCCC--CCCcEeeeEEEEe
Confidence 334665544321 1346789999 9999999 98876654 2222223 44433221 1334567899999
Q ss_pred cCCCceEEcCCCCCceecCCCCeeeeCCcEEEEEeecCC-C----ccEEEEEeCCCceeeee-cCCCCCCcCCcceeecc
Q 038993 170 LARNSWKRIQDIPPCYIARDSPGVYASGSLHWIVMAEYG-R----HDFILALDLSDEAYKEL-PLPPPVLLETGCRVRAN 243 (327)
Q Consensus 170 ~~~~~Wr~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~-~----~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~~ 243 (327)
..+++|+.++.+|... .....+.++|.+|.++..... . ...+..||+++++|+.+ ++|... ...
T Consensus 125 ~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~--- 194 (306)
T 3ii7_A 125 TRTESWHTKPSMLTQR--CSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEAR-----KNH--- 194 (306)
T ss_dssp TTTTEEEEECCCSSCC--BSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCC-----BSC---
T ss_pred CCCCceEeCCCCcCCc--ceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchh-----hcc---
Confidence 9999999998777543 223467789999999875431 1 45699999999999999 444432 122
Q ss_pred EEEEeCCCcEEEEEecCCCcCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCCcccCCCcccccccC---CCceEEEEe
Q 038993 244 YFGVLDNGCLCLVSNYGGGYRTPLSHVWVMTEYGVKDSWTKLFSILEEQVISPSPEFYDYSLPFESLE---PPSLLRGWH 320 (327)
Q Consensus 244 ~l~~~~~g~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 320 (327)
.++.++ |+|+++...... ...-++|+++-. ..+|+++..++............+.++.+--.+ .-.-+..||
T Consensus 195 ~~~~~~-~~i~v~GG~~~~--~~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd 269 (306)
T 3ii7_A 195 GLVFVK-DKIFAVGGQNGL--GGLDNVEYYDIK--LNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYN 269 (306)
T ss_dssp EEEEET-TEEEEECCEETT--EEBCCEEEEETT--TTEEEECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEE
T ss_pred eEEEEC-CEEEEEeCCCCC--CCCceEEEeeCC--CCcEEECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEc
Confidence 566777 999999765432 113356777642 367998754433222111112233333332221 224567777
Q ss_pred cCC
Q 038993 321 PTS 323 (327)
Q Consensus 321 ~~~ 323 (327)
+++
T Consensus 270 ~~~ 272 (306)
T 3ii7_A 270 TET 272 (306)
T ss_dssp TTT
T ss_pred CCC
Confidence 765
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.81 E-value=3.4e-07 Score=80.83 Aligned_cols=203 Identities=12% Similarity=0.112 Sum_probs=122.9
Q ss_pred eccCCcEEeeec----CCCCEEEEEcCCccccceeeccccCCCCCC---CceEEEE--EEEEEEEeCCCCCCCccEEEEE
Q 038993 98 GCCNGLLCIATN----RLPQTLAIWTHLRESTAFYRRQRLPWIPKR---LVAFFMG--LVRIARRSGDACFGGAAEVKVY 168 (327)
Q Consensus 98 ~sc~GLlcl~~~----~~~~~~~V~N~~~P~T~~~~~~~LP~~~~~---~~~~gfg--vv~v~~~~~~~~~~~~~~~~Vy 168 (327)
...+|.|.+... .....+.++| |.|++|. .+|+++.. .....++ ++.+.... .......+++|
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d---~~~~~W~--~~~~~p~~r~~~~~~~~~~~iyv~GG~~---~~~~~~~~~~~ 129 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYD---PVKDQWT--SVANMRDRRSTLGAAVLNGLLYAVGGFD---GSTGLSSVEAY 129 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEE---TTTTEEE--EECCCSSCCBSCEEEEETTEEEEEEEEC---SSCEEEEEEEE
T ss_pred EEECCEEEEEeCcCCCccccceEEEC---CCCCcee--eCCCCCccccceEEEEECCEEEEEcCCC---CCccCceEEEE
Confidence 334665544321 1235689999 9999999 99877654 2222233 55554432 22345789999
Q ss_pred EcCCCceEEcCCCCCceecCCCCeeeeCCcEEEEEeecCCC---ccEEEEEeCCCceeeee-cCCCCCCcCCcceeeccE
Q 038993 169 SLARNSWKRIQDIPPCYIARDSPGVYASGSLHWIVMAEYGR---HDFILALDLSDEAYKEL-PLPPPVLLETGCRVRANY 244 (327)
Q Consensus 169 s~~~~~Wr~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~---~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~~~ 244 (327)
+..+++|+.++.+|... .....+.++|.+|.++...... ...+..||+.+++|+.+ ++|... ... .
T Consensus 130 d~~~~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~---~ 199 (302)
T 2xn4_A 130 NIKSNEWFHVAPMNTRR--SSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR-----SGA---G 199 (302)
T ss_dssp ETTTTEEEEECCCSSCC--BSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC-----BSC---E
T ss_pred eCCCCeEeecCCCCCcc--cCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc-----ccc---c
Confidence 99999999998776533 2234577899999998754311 34689999999999998 444332 122 5
Q ss_pred EEEeCCCcEEEEEecCCCcCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCCcccCCCcccccccCC---CceEEEEec
Q 038993 245 FGVLDNGCLCLVSNYGGGYRTPLSHVWVMTEYGVKDSWTKLFSILEEQVISPSPEFYDYSLPFESLEP---PSLLRGWHP 321 (327)
Q Consensus 245 l~~~~~g~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 321 (327)
++.++ |+|+++...... ...-++|+++-. ...|+++..++............+.++.+--.+. -.-+..|||
T Consensus 200 ~~~~~-~~iyv~GG~~~~--~~~~~~~~yd~~--~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 200 VGVLN-NLLYAVGGHDGP--LVRKSVEVYDPT--TNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp EEEET-TEEEEECCBSSS--SBCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEET
T ss_pred EEEEC-CEEEEECCCCCC--cccceEEEEeCC--CCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcC
Confidence 66778 999999876542 113357777642 3679987644333221111122333333322221 234677887
Q ss_pred CC
Q 038993 322 TS 323 (327)
Q Consensus 322 ~~ 323 (327)
++
T Consensus 275 ~~ 276 (302)
T 2xn4_A 275 TT 276 (302)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.80 E-value=1e-06 Score=78.47 Aligned_cols=155 Identities=10% Similarity=0.139 Sum_probs=104.5
Q ss_pred EEEEEcCCccccceeeccccCCCCCC---CceEEEE--EEEEEEEeCCCCCCCccEEEEEEcCCCceEEcCCCCCceecC
Q 038993 114 TLAIWTHLRESTAFYRRQRLPWIPKR---LVAFFMG--LVRIARRSGDACFGGAAEVKVYSLARNSWKRIQDIPPCYIAR 188 (327)
Q Consensus 114 ~~~V~N~~~P~T~~~~~~~LP~~~~~---~~~~gfg--vv~v~~~~~~~~~~~~~~~~Vys~~~~~Wr~~~~~p~~~~~~ 188 (327)
.+.++| |.|++|. .+|+.+.. .....++ ++.+..... ........+++|+..+++|+.+..+|....
T Consensus 79 ~~~~~d---~~~~~W~--~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-- 150 (318)
T 2woz_A 79 YFFQLD---NVSSEWV--GLPPLPSARCLFGLGEVDDKIYVVAGKDL-QTEASLDSVLCYDPVAAKWSEVKNLPIKVY-- 150 (318)
T ss_dssp EEEEEE---TTTTEEE--ECSCBSSCBCSCEEEEETTEEEEEEEEBT-TTCCEEEEEEEEETTTTEEEEECCCSSCEE--
T ss_pred cEEEEe---CCCCcEE--ECCCCCccccccceEEECCEEEEEcCccC-CCCcccceEEEEeCCCCCEeECCCCCCccc--
Confidence 388999 9999999 99877654 2222223 555544321 123445789999999999999987775432
Q ss_pred CCCeeeeCCcEEEEEeecC--CCccEEEEEeCCCceeeee-cCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCcCC
Q 038993 189 DSPGVYASGSLHWIVMAEY--GRHDFILALDLSDEAYKEL-PLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGYRT 265 (327)
Q Consensus 189 ~~~~v~~~G~lywl~~~~~--~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~ 265 (327)
....+.++|.+|.++.... .....+..||+.+++|+.+ ++|... ... ..+.++ |+|+++...... .
T Consensus 151 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~---~~~~~~-~~iyv~GG~~~~--~ 219 (318)
T 2woz_A 151 GHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR-----SMF---GVAIHK-GKIVIAGGVTED--G 219 (318)
T ss_dssp SCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC-----BSC---EEEEET-TEEEEEEEEETT--E
T ss_pred ccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc-----ccc---eEEEEC-CEEEEEcCcCCC--C
Confidence 2346778999999987532 2234699999999999998 444332 122 556778 999999876542 1
Q ss_pred CeEEEEEEeeCCCCCCeEEEEEEc
Q 038993 266 PLSHVWVMTEYGVKDSWTKLFSIL 289 (327)
Q Consensus 266 ~~l~iW~l~~~~~~~~W~~~~~i~ 289 (327)
..-++|+++-. ..+|+++..++
T Consensus 220 ~~~~~~~yd~~--~~~W~~~~~~p 241 (318)
T 2woz_A 220 LSASVEAFDLK--TNKWEVMTEFP 241 (318)
T ss_dssp EEEEEEEEETT--TCCEEECCCCS
T ss_pred ccceEEEEECC--CCeEEECCCCC
Confidence 13467777642 36799875443
No 7
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.79 E-value=4e-07 Score=80.27 Aligned_cols=189 Identities=13% Similarity=0.141 Sum_probs=115.8
Q ss_pred CCEEEEEcCCccccce---eeccccCCCCCC---CceEEEE--EEEEEEEeCCCCCCCccEEEEEEcCCCceEEcCCCCC
Q 038993 112 PQTLAIWTHLRESTAF---YRRQRLPWIPKR---LVAFFMG--LVRIARRSGDACFGGAAEVKVYSLARNSWKRIQDIPP 183 (327)
Q Consensus 112 ~~~~~V~N~~~P~T~~---~~~~~LP~~~~~---~~~~gfg--vv~v~~~~~~~~~~~~~~~~Vys~~~~~Wr~~~~~p~ 183 (327)
...+.++| |.|++ |. .+|+.+.. .....++ ++.+... ........+++|+..+++|+.++.+|.
T Consensus 77 ~~~~~~~d---~~~~~~~~W~--~~~~~p~~r~~~~~~~~~~~lyv~GG~---~~~~~~~~~~~~d~~~~~W~~~~~~p~ 148 (301)
T 2vpj_A 77 LSSVECLD---YTADEDGVWY--SVAPMNVRRGLAGATTLGDMIYVSGGF---DGSRRHTSMERYDPNIDQWSMLGDMQT 148 (301)
T ss_dssp CCCEEEEE---TTCCTTCCCE--EECCCSSCCBSCEEEEETTEEEEECCB---CSSCBCCEEEEEETTTTEEEEEEECSS
T ss_pred CceEEEEE---CCCCCCCeeE--ECCCCCCCccceeEEEECCEEEEEccc---CCCcccceEEEEcCCCCeEEECCCCCC
Confidence 35789999 99999 99 98877654 2222222 4443321 222345789999999999999977664
Q ss_pred ceecCCCCeeeeCCcEEEEEeecC-CCccEEEEEeCCCceeeee-cCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCC
Q 038993 184 CYIARDSPGVYASGSLHWIVMAEY-GRHDFILALDLSDEAYKEL-PLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGG 261 (327)
Q Consensus 184 ~~~~~~~~~v~~~G~lywl~~~~~-~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~ 261 (327)
.. .....+.++|.+|.++.... .....+..||+++++|+.+ ++|... ... .++.++ ++|+++.....
T Consensus 149 ~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~---~~~~~~-~~i~v~GG~~~ 217 (301)
T 2vpj_A 149 AR--EGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKR-----SGA---GVALLN-DHIYVVGGFDG 217 (301)
T ss_dssp CC--BSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCC-----BSC---EEEEET-TEEEEECCBCS
T ss_pred Cc--ccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCccc-----ccc---eEEEEC-CEEEEEeCCCC
Confidence 33 22346778999999986543 2234699999999999998 444432 122 566777 99999987654
Q ss_pred CcCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCCcccCCCcccccccCCC---ceEEEEecCC
Q 038993 262 GYRTPLSHVWVMTEYGVKDSWTKLFSILEEQVISPSPEFYDYSLPFESLEPP---SLLRGWHPTS 323 (327)
Q Consensus 262 ~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 323 (327)
.. ..-++|+++-. ..+|+++..++............+.++.+-..+.. .-+..||+++
T Consensus 218 ~~--~~~~v~~yd~~--~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 218 TA--HLSSVEAYNIR--TDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp SS--BCCCEEEEETT--TTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred Cc--ccceEEEEeCC--CCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCC
Confidence 31 13456666642 36799875443322211111223333333322221 4567788765
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.69 E-value=6.7e-07 Score=79.32 Aligned_cols=153 Identities=12% Similarity=0.113 Sum_probs=102.1
Q ss_pred CEEEEEcCCccccceeeccccCCCCCC---CceEEEE--EEEEEEEeCCCCCCCccEEEEEEcCCCceEEcCCCCCceec
Q 038993 113 QTLAIWTHLRESTAFYRRQRLPWIPKR---LVAFFMG--LVRIARRSGDACFGGAAEVKVYSLARNSWKRIQDIPPCYIA 187 (327)
Q Consensus 113 ~~~~V~N~~~P~T~~~~~~~LP~~~~~---~~~~gfg--vv~v~~~~~~~~~~~~~~~~Vys~~~~~Wr~~~~~p~~~~~ 187 (327)
..+.++| |.|++|. .+|+++.. .....++ ++.+.... .......+++|+..+++|+.+..+|....
T Consensus 90 ~~~~~~d---~~~~~W~--~~~~~p~~r~~~~~~~~~~~iyv~GG~~---~~~~~~~~~~yd~~~~~W~~~~~~p~~r~- 160 (308)
T 1zgk_A 90 SALDCYN---PMTNQWS--PCAPMSVPRNRIGVGVIDGHIYAVGGSH---GCIHHNSVERYEPERDEWHLVAPMLTRRI- 160 (308)
T ss_dssp CCEEEEE---TTTTEEE--ECCCCSSCCBTCEEEEETTEEEEECCEE---TTEECCCEEEEETTTTEEEECCCCSSCCB-
T ss_pred ceEEEEC---CCCCeEe--ECCCCCcCccccEEEEECCEEEEEcCCC---CCcccccEEEECCCCCeEeECCCCCcccc-
Confidence 4689999 9999999 99877654 2222222 44443221 12235679999999999999987764332
Q ss_pred CCCCeeeeCCcEEEEEeecC-CCccEEEEEeCCCceeeee-cCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCcCC
Q 038993 188 RDSPGVYASGSLHWIVMAEY-GRHDFILALDLSDEAYKEL-PLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGYRT 265 (327)
Q Consensus 188 ~~~~~v~~~G~lywl~~~~~-~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~ 265 (327)
....+.++|.+|.++.... .....+..||+.+++|+.+ ++|... ... ..+.++ ++|+++...... .
T Consensus 161 -~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~---~~~~~~-~~iyv~GG~~~~--~ 228 (308)
T 1zgk_A 161 -GVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIR-----SGA---GVCVLH-NCIYAAGGYDGQ--D 228 (308)
T ss_dssp -SCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCC-----BSC---EEEEET-TEEEEECCBCSS--S
T ss_pred -ceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCcc-----ccc---eEEEEC-CEEEEEeCCCCC--C
Confidence 2346778999999987543 1235699999999999988 444322 122 556677 999999876542 1
Q ss_pred CeEEEEEEeeCCCCCCeEEEEEE
Q 038993 266 PLSHVWVMTEYGVKDSWTKLFSI 288 (327)
Q Consensus 266 ~~l~iW~l~~~~~~~~W~~~~~i 288 (327)
..-++|+++-. ..+|+++..+
T Consensus 229 ~~~~v~~yd~~--~~~W~~~~~~ 249 (308)
T 1zgk_A 229 QLNSVERYDVE--TETWTFVAPM 249 (308)
T ss_dssp BCCCEEEEETT--TTEEEECCCC
T ss_pred ccceEEEEeCC--CCcEEECCCC
Confidence 24567777642 3679986543
No 9
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.64 E-value=9.7e-07 Score=78.03 Aligned_cols=155 Identities=13% Similarity=0.163 Sum_probs=102.9
Q ss_pred CCEEEEEcCCccccceeeccccCCCCCC---CceEEEE--EEEEEEEeCCCCCCCccEEEEEEcCCCceEEcCCCCCcee
Q 038993 112 PQTLAIWTHLRESTAFYRRQRLPWIPKR---LVAFFMG--LVRIARRSGDACFGGAAEVKVYSLARNSWKRIQDIPPCYI 186 (327)
Q Consensus 112 ~~~~~V~N~~~P~T~~~~~~~LP~~~~~---~~~~gfg--vv~v~~~~~~~~~~~~~~~~Vys~~~~~Wr~~~~~p~~~~ 186 (327)
...+.++| |.+++|. .+++++.. .....++ ++.+... . ......+++|+..+++|+.+..+|....
T Consensus 23 ~~~~~~~d---~~~~~W~--~~~~~p~~r~~~~~~~~~~~lyv~GG~---~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 93 (306)
T 3ii7_A 23 PQSCRYFN---PKDYSWT--DIRCPFEKRRDAACVFWDNVVYILGGS---Q-LFPIKRMDCYNVVKDSWYSKLGPPTPRD 93 (306)
T ss_dssp TTSEEEEE---TTTTEEE--ECCCCSCCCBSCEEEEETTEEEEECCB---S-SSBCCEEEEEETTTTEEEEEECCSSCCB
T ss_pred CceEEEec---CCCCCEe--cCCCCCcccceeEEEEECCEEEEEeCC---C-CCCcceEEEEeCCCCeEEECCCCCcccc
Confidence 45688999 9999999 99877654 2222222 3333221 1 3456789999999999999987764332
Q ss_pred cCCCCeeeeCCcEEEEEeecC--CCccEEEEEeCCCceeeee-cCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCc
Q 038993 187 ARDSPGVYASGSLHWIVMAEY--GRHDFILALDLSDEAYKEL-PLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGY 263 (327)
Q Consensus 187 ~~~~~~v~~~G~lywl~~~~~--~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~ 263 (327)
....+.++|.+|.++.... .....+..||+.+.+|+.+ ++|... ... ..+.++ |+|+++.......
T Consensus 94 --~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~---~~~~~~-~~iyv~GG~~~~~ 162 (306)
T 3ii7_A 94 --SLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR-----CSH---GMVEAN-GLIYVCGGSLGNN 162 (306)
T ss_dssp --SCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC-----BSC---EEEEET-TEEEEECCEESCT
T ss_pred --ceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc-----cee---EEEEEC-CEEEEECCCCCCC
Confidence 2345678999999987642 2345699999999999998 445432 122 556677 9999998754321
Q ss_pred C--CCeEEEEEEeeCCCCCCeEEEEEE
Q 038993 264 R--TPLSHVWVMTEYGVKDSWTKLFSI 288 (327)
Q Consensus 264 ~--~~~l~iW~l~~~~~~~~W~~~~~i 288 (327)
. ...-++|+++-. ..+|+++..+
T Consensus 163 ~~~~~~~~~~~yd~~--~~~W~~~~~~ 187 (306)
T 3ii7_A 163 VSGRVLNSCEVYDPA--TETWTELCPM 187 (306)
T ss_dssp TTCEECCCEEEEETT--TTEEEEECCC
T ss_pred CcccccceEEEeCCC--CCeEEECCCc
Confidence 1 003456776642 3689987543
No 10
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.62 E-value=2e-05 Score=72.98 Aligned_cols=51 Identities=24% Similarity=0.238 Sum_probs=45.7
Q ss_pred CCCCCCCcHHHHHHHHhcCCcchhhhheeccccchhhcCChhhHHHHhhcc
Q 038993 1 MDDRDPLPLHIIDDILSRLHVKQLLRLRCVSKTWRDLIDGPDFIKLQLSRN 51 (327)
Q Consensus 1 m~~~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~~~F~~~~~~~~ 51 (327)
++.+..||+|++.+||+.|++++|.++.+|||+|+.++.++.+.+......
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~ 66 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEE 66 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTT
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeec
Confidence 356788999999999999999999999999999999999999888776543
No 11
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.60 E-value=1e-06 Score=77.71 Aligned_cols=190 Identities=13% Similarity=0.175 Sum_probs=113.6
Q ss_pred CEEEEEcCCccccceeeccccCCCCCC---CceEEEE--EEEEEEEeCCCCCCCccEEEEEEcCCCceEEcCCCCCceec
Q 038993 113 QTLAIWTHLRESTAFYRRQRLPWIPKR---LVAFFMG--LVRIARRSGDACFGGAAEVKVYSLARNSWKRIQDIPPCYIA 187 (327)
Q Consensus 113 ~~~~V~N~~~P~T~~~~~~~LP~~~~~---~~~~gfg--vv~v~~~~~~~~~~~~~~~~Vys~~~~~Wr~~~~~p~~~~~ 187 (327)
..+.++| |.+++|. .++..+.. .....++ ++.+... +.......+++|+..+++|+.++.+|....
T Consensus 30 ~~~~~~d---~~~~~W~--~~~~~p~~r~~~~~~~~~~~lyv~GG~---~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~- 100 (302)
T 2xn4_A 30 RSVECYD---FKEERWH--QVAELPSRRCRAGMVYMAGLVFAVGGF---NGSLRVRTVDSYDPVKDQWTSVANMRDRRS- 100 (302)
T ss_dssp CCEEEEE---TTTTEEE--EECCCSSCCBSCEEEEETTEEEEESCB---CSSSBCCCEEEEETTTTEEEEECCCSSCCB-
T ss_pred CcEEEEc---CcCCcEe--EcccCCcccccceEEEECCEEEEEeCc---CCCccccceEEECCCCCceeeCCCCCcccc-
Confidence 4588999 9999999 98776654 2222222 3333221 222345679999999999999987765332
Q ss_pred CCCCeeeeCCcEEEEEeecC-CCccEEEEEeCCCceeeee-cCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCcCC
Q 038993 188 RDSPGVYASGSLHWIVMAEY-GRHDFILALDLSDEAYKEL-PLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGYRT 265 (327)
Q Consensus 188 ~~~~~v~~~G~lywl~~~~~-~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~ 265 (327)
....+.++|.+|.++.... .....+..||+.+.+|+.+ ++|... ... ..+.++ |+|+++.........
T Consensus 101 -~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~---~~~~~~-~~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 101 -TLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRR-----SSV---GVGVVG-GLLYAVGGYDVASRQ 170 (302)
T ss_dssp -SCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCC-----BSC---EEEEET-TEEEEECCEETTTTE
T ss_pred -ceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcc-----cCc---eEEEEC-CEEEEEeCCCCCCCc
Confidence 2346778999999987643 2224688999999999998 444332 122 556677 999999865432101
Q ss_pred CeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCCcccCCCcccccccCC---CceEEEEecCC
Q 038993 266 PLSHVWVMTEYGVKDSWTKLFSILEEQVISPSPEFYDYSLPFESLEP---PSLLRGWHPTS 323 (327)
Q Consensus 266 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 323 (327)
..-++|+.+-. ..+|+++..++............+.++.+--.+. -.-+..||+++
T Consensus 171 ~~~~~~~yd~~--~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 171 CLSTVECYNAT--TNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp ECCCEEEEETT--TTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTT
T ss_pred cccEEEEEeCC--CCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCC
Confidence 12346776642 3689987544332211111122333333322221 23467777765
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=98.60 E-value=1.8e-06 Score=76.71 Aligned_cols=154 Identities=12% Similarity=0.161 Sum_probs=103.7
Q ss_pred CCEEEEEcCCccccceeeccccCCCCCC---CceEEEE--EEEEEEEeCCCCCCCccEEEEEEcCCCceEEcCCCCCcee
Q 038993 112 PQTLAIWTHLRESTAFYRRQRLPWIPKR---LVAFFMG--LVRIARRSGDACFGGAAEVKVYSLARNSWKRIQDIPPCYI 186 (327)
Q Consensus 112 ~~~~~V~N~~~P~T~~~~~~~LP~~~~~---~~~~gfg--vv~v~~~~~~~~~~~~~~~~Vys~~~~~Wr~~~~~p~~~~ 186 (327)
...+.++| |.|++|. .+++.+.. .....++ ++.+.... ........+++|+..+++|+.+..+|...
T Consensus 116 ~~~~~~~d---~~~~~W~--~~~~~p~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~~yd~~~~~W~~~~~~p~~r- 187 (315)
T 4asc_A 116 LDSVMCYD---RLSFKWG--ESDPLPYVVYGHTVLSHMDLVYVIGGKG--SDRKCLNKMCVYDPKKFEWKELAPMQTAR- 187 (315)
T ss_dssp CCCEEEEE---TTTTEEE--ECCCCSSCCBSCEEEEETTEEEEECCBC--TTSCBCCCEEEEETTTTEEEECCCCSSCC-
T ss_pred cceEEEEC---CCCCcEe--ECCCCCCcccceeEEEECCEEEEEeCCC--CCCcccceEEEEeCCCCeEEECCCCCCch-
Confidence 35689999 9999999 99876654 2222233 44443221 22345678999999999999998776533
Q ss_pred cCCCCeeeeCCcEEEEEeecC-CCccEEEEEeCCCceeeeec-CCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCc-
Q 038993 187 ARDSPGVYASGSLHWIVMAEY-GRHDFILALDLSDEAYKELP-LPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGY- 263 (327)
Q Consensus 187 ~~~~~~v~~~G~lywl~~~~~-~~~~~il~fD~~~e~~~~i~-lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~- 263 (327)
.....+.++|.+|.++.... .....+..||+++++|+.+. +|... ... .++.++ |+|+++.......
T Consensus 188 -~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~---~~~~~~-~~l~v~GG~~~~~~ 257 (315)
T 4asc_A 188 -SLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQER-----SSL---SLVSLV-GTLYAIGGFATLET 257 (315)
T ss_dssp -BSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCC-----BSC---EEEEET-TEEEEEEEEEEEEC
T ss_pred -hceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcc-----cce---eEEEEC-CEEEEECCccccCc
Confidence 22346778999999987653 12346899999999999984 44332 122 566778 9999998763210
Q ss_pred --C----CCeEEEEEEeeCCCCCCeEEE
Q 038993 264 --R----TPLSHVWVMTEYGVKDSWTKL 285 (327)
Q Consensus 264 --~----~~~l~iW~l~~~~~~~~W~~~ 285 (327)
+ ...-+||+.+-. ..+|+++
T Consensus 258 ~~~~~~~~~~~~v~~yd~~--~~~W~~~ 283 (315)
T 4asc_A 258 ESGELVPTELNDIWRYNEE--EKKWEGV 283 (315)
T ss_dssp TTSCEEEEEEEEEEEEETT--TTEEEEE
T ss_pred CCccccccccCcEEEecCC--CChhhhh
Confidence 0 123568888752 3689988
No 13
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.59 E-value=1.9e-06 Score=75.91 Aligned_cols=154 Identities=12% Similarity=0.121 Sum_probs=102.0
Q ss_pred CCEEEEEcCCccccceeeccccCCCCCC---CceEEEE--EEEEEEEeCCCCCCCccEEEEEEcCCCc---eEEcCCCCC
Q 038993 112 PQTLAIWTHLRESTAFYRRQRLPWIPKR---LVAFFMG--LVRIARRSGDACFGGAAEVKVYSLARNS---WKRIQDIPP 183 (327)
Q Consensus 112 ~~~~~V~N~~~P~T~~~~~~~LP~~~~~---~~~~gfg--vv~v~~~~~~~~~~~~~~~~Vys~~~~~---Wr~~~~~p~ 183 (327)
...+.++| |.|++|. .+|..+.. .....++ ++.+... .+......+++|+..++. |+.+..+|.
T Consensus 30 ~~~~~~~d---~~~~~W~--~~~~~p~~r~~~~~~~~~~~l~v~GG~---~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~ 101 (301)
T 2vpj_A 30 IDVVEKYD---PKTQEWS--FLPSITRKRRYVASVSLHDRIYVIGGY---DGRSRLSSVECLDYTADEDGVWYSVAPMNV 101 (301)
T ss_dssp CCCEEEEE---TTTTEEE--ECCCCSSCCBSCEEEEETTEEEEECCB---CSSCBCCCEEEEETTCCTTCCCEEECCCSS
T ss_pred eeEEEEEc---CCCCeEE--eCCCCChhhccccEEEECCEEEEEcCC---CCCccCceEEEEECCCCCCCeeEECCCCCC
Confidence 35689999 9999999 99876654 1222222 3333221 223445689999999999 999987765
Q ss_pred ceecCCCCeeeeCCcEEEEEeecC-CCccEEEEEeCCCceeeee-cCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCC
Q 038993 184 CYIARDSPGVYASGSLHWIVMAEY-GRHDFILALDLSDEAYKEL-PLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGG 261 (327)
Q Consensus 184 ~~~~~~~~~v~~~G~lywl~~~~~-~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~ 261 (327)
.. .....+.++|.+|.++.... .....+..||+.+.+|+.+ ++|... ... ..+.++ |+|+++.....
T Consensus 102 ~r--~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-----~~~---~~~~~~-~~iyv~GG~~~ 170 (301)
T 2vpj_A 102 RR--GLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAR-----EGA---GLVVAS-GVIYCLGGYDG 170 (301)
T ss_dssp CC--BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCC-----BSC---EEEEET-TEEEEECCBCS
T ss_pred Cc--cceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCc-----ccc---eEEEEC-CEEEEECCCCC
Confidence 33 22346778999999987543 2234699999999999998 455332 122 556677 99999987654
Q ss_pred CcCCCeEEEEEEeeCCCCCCeEEEEEE
Q 038993 262 GYRTPLSHVWVMTEYGVKDSWTKLFSI 288 (327)
Q Consensus 262 ~~~~~~l~iW~l~~~~~~~~W~~~~~i 288 (327)
. ...-++|+++-. ...|+++..+
T Consensus 171 ~--~~~~~~~~~d~~--~~~W~~~~~~ 193 (301)
T 2vpj_A 171 L--NILNSVEKYDPH--TGHWTNVTPM 193 (301)
T ss_dssp S--CBCCCEEEEETT--TTEEEEECCC
T ss_pred C--cccceEEEEeCC--CCcEEeCCCC
Confidence 2 123456776642 3689987543
No 14
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.57 E-value=3.2e-06 Score=74.90 Aligned_cols=170 Identities=12% Similarity=0.163 Sum_probs=110.2
Q ss_pred eccCCcEEeeec----CCCCEEEEEcCCccccceeeccccCCCCCC---CceEEEE--EEEEEEEeCCCCCCCccEEEEE
Q 038993 98 GCCNGLLCIATN----RLPQTLAIWTHLRESTAFYRRQRLPWIPKR---LVAFFMG--LVRIARRSGDACFGGAAEVKVY 168 (327)
Q Consensus 98 ~sc~GLlcl~~~----~~~~~~~V~N~~~P~T~~~~~~~LP~~~~~---~~~~gfg--vv~v~~~~~~~~~~~~~~~~Vy 168 (327)
+..+|-|.+... .....+.++| |.|.+|. .+++.+.. .....++ ++.+... +.......+++|
T Consensus 118 ~~~~~~iyv~GG~~~~~~~~~~~~yd---~~~~~W~--~~~~~p~~r~~~~~~~~~~~iyv~GG~---~~~~~~~~~~~y 189 (308)
T 1zgk_A 118 GVIDGHIYAVGGSHGCIHHNSVERYE---PERDEWH--LVAPMLTRRIGVGVAVLNRLLYAVGGF---DGTNRLNSAECY 189 (308)
T ss_dssp EEETTEEEEECCEETTEECCCEEEEE---TTTTEEE--ECCCCSSCCBSCEEEEETTEEEEECCB---CSSCBCCCEEEE
T ss_pred EEECCEEEEEcCCCCCcccccEEEEC---CCCCeEe--ECCCCCccccceEEEEECCEEEEEeCC---CCCCcCceEEEE
Confidence 344666544321 1235689999 9999999 99876654 2222222 4433322 222236789999
Q ss_pred EcCCCceEEcCCCCCceecCCCCeeeeCCcEEEEEeecC-CCccEEEEEeCCCceeeee-cCCCCCCcCCcceeeccEEE
Q 038993 169 SLARNSWKRIQDIPPCYIARDSPGVYASGSLHWIVMAEY-GRHDFILALDLSDEAYKEL-PLPPPVLLETGCRVRANYFG 246 (327)
Q Consensus 169 s~~~~~Wr~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~-~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~~~l~ 246 (327)
+..+++|+.+..+|.... ....+.++|.+|.++.... .....+..||+++++|+.+ ++|... ... .++
T Consensus 190 d~~~~~W~~~~~~p~~r~--~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r-----~~~---~~~ 259 (308)
T 1zgk_A 190 YPERNEWRMITAMNTIRS--GAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRR-----SAL---GIT 259 (308)
T ss_dssp ETTTTEEEECCCCSSCCB--SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCC-----BSC---EEE
T ss_pred eCCCCeEeeCCCCCCccc--cceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCc-----cce---EEE
Confidence 999999999987765332 2346778999999986543 2235699999999999998 444322 122 556
Q ss_pred EeCCCcEEEEEecCCCcCCCeEEEEEEeeCCCCCCeEEEEEEcC
Q 038993 247 VLDNGCLCLVSNYGGGYRTPLSHVWVMTEYGVKDSWTKLFSILE 290 (327)
Q Consensus 247 ~~~~g~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~ 290 (327)
.++ |+|+++...... ...-+||+++-. ..+|+++..++.
T Consensus 260 ~~~-~~i~v~GG~~~~--~~~~~v~~yd~~--~~~W~~~~~~p~ 298 (308)
T 1zgk_A 260 VHQ-GRIYVLGGYDGH--TFLDSVECYDPD--TDTWSEVTRMTS 298 (308)
T ss_dssp EET-TEEEEECCBCSS--CBCCEEEEEETT--TTEEEEEEECSS
T ss_pred EEC-CEEEEEcCcCCC--cccceEEEEcCC--CCEEeecCCCCC
Confidence 677 999999876542 224577887752 368999865543
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.52 E-value=1.9e-06 Score=77.94 Aligned_cols=176 Identities=14% Similarity=0.099 Sum_probs=106.8
Q ss_pred eccCCcEEeeecCCCCEEEEEcCCccc--cceeeccccCCCC-CC---CceEEEE--EEEEEEEeC--CCCCCCccEEEE
Q 038993 98 GCCNGLLCIATNRLPQTLAIWTHLRES--TAFYRRQRLPWIP-KR---LVAFFMG--LVRIARRSG--DACFGGAAEVKV 167 (327)
Q Consensus 98 ~sc~GLlcl~~~~~~~~~~V~N~~~P~--T~~~~~~~LP~~~-~~---~~~~gfg--vv~v~~~~~--~~~~~~~~~~~V 167 (327)
+..+|-|.+........++++| |. +++|. .+|+.+ .. .....++ ++.+..... .........+++
T Consensus 16 ~~~~~~iyv~GG~~~~~~~~~d---~~~~~~~W~--~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~ 90 (357)
T 2uvk_A 16 AIDNDTVYIGLGSAGTAWYKLD---TQAKDKKWT--ALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHK 90 (357)
T ss_dssp EEETTEEEEECGGGTTCEEEEE---TTSSSCCEE--ECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEE
T ss_pred EEECCEEEEEeCcCCCeEEEEc---cccCCCCee--ECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEE
Confidence 3336666554332345789999 97 59999 998866 33 2223333 444433211 111233567999
Q ss_pred EEcCCCceEEcCCCCCceecCCCCeeeeCCcEEEEEeecCC-----------------------------------CccE
Q 038993 168 YSLARNSWKRIQDIPPCYIARDSPGVYASGSLHWIVMAEYG-----------------------------------RHDF 212 (327)
Q Consensus 168 ys~~~~~Wr~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~-----------------------------------~~~~ 212 (327)
|+..+++|+.+..+++... .....+.++|.+|.++..... ....
T Consensus 91 yd~~~~~W~~~~~~~p~~r-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (357)
T 2uvk_A 91 YNPKTNSWVKLMSHAPMGM-AGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKF 169 (357)
T ss_dssp EETTTTEEEECSCCCSSCC-SSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCE
T ss_pred EeCCCCcEEECCCCCCccc-ccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCccc
Confidence 9999999999987662111 122246689999999875320 1247
Q ss_pred EEEEeCCCceeeee-cCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCcCCCeEEEEEEeeCCCCCCeEEEEEE
Q 038993 213 ILALDLSDEAYKEL-PLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGYRTPLSHVWVMTEYGVKDSWTKLFSI 288 (327)
Q Consensus 213 il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i 288 (327)
+..||+.+.+|+.+ ++|.... ... .++..+ ++|+++...... ....-++|.++-......|+++..+
T Consensus 170 v~~yd~~~~~W~~~~~~p~~~~----~~~---~~~~~~-~~iyv~GG~~~~-~~~~~~v~~~d~d~~~~~W~~~~~~ 237 (357)
T 2uvk_A 170 LLSFDPSTQQWSYAGESPWYGT----AGA---AVVNKG-DKTWLINGEAKP-GLRTDAVFELDFTGNNLKWNKLAPV 237 (357)
T ss_dssp EEEEETTTTEEEEEEECSSCCC----BSC---EEEEET-TEEEEECCEEET-TEECCCEEEEECC---CEEEECCCS
T ss_pred EEEEeCCCCcEEECCCCCCCCc----ccc---cEEEEC-CEEEEEeeecCC-CcccCceEEEEecCCCCcEEecCCC
Confidence 99999999999998 5554321 112 566778 999999764321 1123456766521124679987544
No 16
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.50 E-value=4.5e-05 Score=70.86 Aligned_cols=45 Identities=24% Similarity=0.409 Sum_probs=39.6
Q ss_pred CCCCcHHHHHHHHhcCCcchhhhheeccccchhhcCC-hhhHHHHh
Q 038993 4 RDPLPLHIIDDILSRLHVKQLLRLRCVSKTWRDLIDG-PDFIKLQL 48 (327)
Q Consensus 4 ~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~-~~F~~~~~ 48 (327)
+..||+||+.+||+.||+++|+++.+|||+|+.++.+ +...+.+.
T Consensus 15 ~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~ 60 (464)
T 3v7d_B 15 ITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLL 60 (464)
T ss_dssp HHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHH
T ss_pred hHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 4569999999999999999999999999999999998 66555443
No 17
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=98.49 E-value=6.8e-06 Score=73.06 Aligned_cols=153 Identities=12% Similarity=0.198 Sum_probs=101.9
Q ss_pred CEEEEEcCCccccceeeccccCCCCCC---CceEEEE--EEEEEEEeCCCCCCCccEEEEEEcCCCceEEcCCCCCceec
Q 038993 113 QTLAIWTHLRESTAFYRRQRLPWIPKR---LVAFFMG--LVRIARRSGDACFGGAAEVKVYSLARNSWKRIQDIPPCYIA 187 (327)
Q Consensus 113 ~~~~V~N~~~P~T~~~~~~~LP~~~~~---~~~~gfg--vv~v~~~~~~~~~~~~~~~~Vys~~~~~Wr~~~~~p~~~~~ 187 (327)
..+.++| |.|.+|. .+++.+.. .....++ ++.+.... ........+++|+..+++|+.++.+|....
T Consensus 127 ~~~~~yd---~~~~~W~--~~~~~p~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~- 198 (318)
T 2woz_A 127 DSVLCYD---PVAAKWS--EVKNLPIKVYGHNVISHNGMIYCLGGKT--DDKKCTNRVFIYNPKKGDWKDLAPMKTPRS- 198 (318)
T ss_dssp EEEEEEE---TTTTEEE--EECCCSSCEESCEEEEETTEEEEECCEE--SSSCBCCCEEEEETTTTEEEEECCCSSCCB-
T ss_pred ceEEEEe---CCCCCEe--ECCCCCCcccccEEEEECCEEEEEcCCC--CCCCccceEEEEcCCCCEEEECCCCCCCcc-
Confidence 4688999 9999999 98876654 2222222 44443321 122345679999999999999987664332
Q ss_pred CCCCeeeeCCcEEEEEeecCC-CccEEEEEeCCCceeeee-cCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCc--
Q 038993 188 RDSPGVYASGSLHWIVMAEYG-RHDFILALDLSDEAYKEL-PLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGY-- 263 (327)
Q Consensus 188 ~~~~~v~~~G~lywl~~~~~~-~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~-- 263 (327)
....+.++|.+|.++..... ....+..||+++++|+.+ ++|... ... .++.++ |+|+++.......
T Consensus 199 -~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-----~~~---~~~~~~-~~i~v~GG~~~~~~~ 268 (318)
T 2woz_A 199 -MFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQER-----SSI---SLVSLA-GSLYAIGGFAMIQLE 268 (318)
T ss_dssp -SCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCC-----BSC---EEEEET-TEEEEECCBCCBC--
T ss_pred -cceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcc-----cce---EEEEEC-CEEEEECCeeccCCC
Confidence 23357789999999875431 124688999999999998 455432 122 567778 9999997754310
Q ss_pred -----CCCeEEEEEEeeCCCCCCeEEE
Q 038993 264 -----RTPLSHVWVMTEYGVKDSWTKL 285 (327)
Q Consensus 264 -----~~~~l~iW~l~~~~~~~~W~~~ 285 (327)
....-++|+.+-. ..+|+++
T Consensus 269 ~~~~~~~~~~~v~~yd~~--~~~W~~~ 293 (318)
T 2woz_A 269 SKEFAPTEVNDIWKYEDD--KKEWAGM 293 (318)
T ss_dssp --CCBCCBCCCEEEEETT--TTEEEEE
T ss_pred CceeccceeeeEEEEeCC--CCEehhh
Confidence 0124578888752 3689988
No 18
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.26 E-value=2.5e-05 Score=72.32 Aligned_cols=47 Identities=30% Similarity=0.400 Sum_probs=41.9
Q ss_pred CCCCcHH----HHHHHHhcCCcchhhhheeccccchhhcCChhhHHHHhhc
Q 038993 4 RDPLPLH----IIDDILSRLHVKQLLRLRCVSKTWRDLIDGPDFIKLQLSR 50 (327)
Q Consensus 4 ~~~LP~D----ll~eIL~rLP~ksl~r~r~VcK~W~~li~~~~F~~~~~~~ 50 (327)
+..||+| |+..||+.|++++|.++.+|||+|+.++.++.+.+....+
T Consensus 11 ~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~ 61 (435)
T 1p22_A 11 ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIER 61 (435)
T ss_dssp HHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHH
T ss_pred HHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHh
Confidence 4569999 9999999999999999999999999999988877766554
No 19
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.01 E-value=1.1e-06 Score=76.44 Aligned_cols=49 Identities=24% Similarity=0.365 Sum_probs=46.0
Q ss_pred CCCCcHHHHHHHHhcCCcchhhhheeccccchhhcCChhhHHHHhhccC
Q 038993 4 RDPLPLHIIDDILSRLHVKQLLRLRCVSKTWRDLIDGPDFIKLQLSRNQ 52 (327)
Q Consensus 4 ~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~~~F~~~~~~~~~ 52 (327)
++.||+|++..||+.|++++|+++.+|||+||.+.+++...+.+..+..
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~ 53 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDL 53 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSG
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccC
Confidence 4579999999999999999999999999999999999999999988764
No 20
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.00 E-value=0.00018 Score=71.08 Aligned_cols=156 Identities=12% Similarity=0.079 Sum_probs=95.6
Q ss_pred CCEEEEEcCCccccceeeccccC-C-----CC-CC--CceEEE--E--EEEEEEEeCCCCCCCccEEEEEEcCCCceEEc
Q 038993 112 PQTLAIWTHLRESTAFYRRQRLP-W-----IP-KR--LVAFFM--G--LVRIARRSGDACFGGAAEVKVYSLARNSWKRI 178 (327)
Q Consensus 112 ~~~~~V~N~~~P~T~~~~~~~LP-~-----~~-~~--~~~~gf--g--vv~v~~~~~~~~~~~~~~~~Vys~~~~~Wr~~ 178 (327)
...+.++| |.|++|. .++ + .+ .+ +....+ + ++.+.... ........+++|+..+++|+.+
T Consensus 411 ~~~v~~yd---~~~~~W~--~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~--~~~~~~~dv~~yd~~t~~W~~~ 483 (695)
T 2zwa_A 411 VNEILQLS---IHYDKID--MKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRK--APHQGLSDNWIFDMKTREWSMI 483 (695)
T ss_dssp CCCEEEEE---ECSSCEE--EEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBS--STTCBCCCCEEEETTTTEEEEC
T ss_pred cCcEEEEE---CCCCeEE--EeccCCCCCCCCccccceEEEEEccCCEEEEEcCCC--CCCCccccEEEEeCCCCcEEEC
Confidence 35689999 9999999 887 4 12 22 222333 3 33332221 1112356799999999999999
Q ss_pred CCCCCceecCCCCeeee-CCcEEEEEeecCCCccEEEEEeCCCceeeeec----CCCCCCcCCcceeeccEEEEeC--CC
Q 038993 179 QDIPPCYIARDSPGVYA-SGSLHWIVMAEYGRHDFILALDLSDEAYKELP----LPPPVLLETGCRVRANYFGVLD--NG 251 (327)
Q Consensus 179 ~~~p~~~~~~~~~~v~~-~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~----lP~~~~~~~~~~~~~~~l~~~~--~g 251 (327)
..+|.... ....+.+ +|.+|.++...... .+..||+.+.+|+.+. +|.... .. ..++++ +|
T Consensus 484 ~~~p~~R~--~h~~~~~~~~~iyv~GG~~~~~--~v~~yd~~t~~W~~~~~~g~~p~~r~-----~~---~a~v~~~~~~ 551 (695)
T 2zwa_A 484 KSLSHTRF--RHSACSLPDGNVLILGGVTEGP--AMLLYNVTEEIFKDVTPKDEFFQNSL-----VS---AGLEFDPVSK 551 (695)
T ss_dssp CCCSBCCB--SCEEEECTTSCEEEECCBCSSC--SEEEEETTTTEEEECCCSSGGGGSCC-----BS---CEEEEETTTT
T ss_pred CCCCCCcc--cceEEEEcCCEEEEECCCCCCC--CEEEEECCCCceEEccCCCCCCCccc-----ce---eEEEEeCCCC
Confidence 87775332 2234554 99999998775422 6999999999999885 343321 11 212222 27
Q ss_pred cEEEEEecCCCcCCCeEEEEEEeeCCCCCC------eEEEEEE
Q 038993 252 CLCLVSNYGGGYRTPLSHVWVMTEYGVKDS------WTKLFSI 288 (327)
Q Consensus 252 ~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~------W~~~~~i 288 (327)
+|++++..........-++|+.+-.. .. |+++...
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~--~~w~~~~~W~~~~~~ 592 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDA--ENATEPITVIKKLQH 592 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECT--TCSSCCEEEEEEEEC
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccC--CccccceEEEEcCCC
Confidence 89999876432112234566666422 34 8887663
No 21
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.99 E-value=8.1e-05 Score=67.01 Aligned_cols=156 Identities=10% Similarity=-0.038 Sum_probs=93.8
Q ss_pred CEEEEEcCCccccceeeccccCCCCCC--C--ceEEEE--EEEEEEEeCCCCCCCccEEEEEEc--CCCceEEcCCCCCc
Q 038993 113 QTLAIWTHLRESTAFYRRQRLPWIPKR--L--VAFFMG--LVRIARRSGDACFGGAAEVKVYSL--ARNSWKRIQDIPPC 184 (327)
Q Consensus 113 ~~~~V~N~~~P~T~~~~~~~LP~~~~~--~--~~~gfg--vv~v~~~~~~~~~~~~~~~~Vys~--~~~~Wr~~~~~p~~ 184 (327)
..+.++| |.|.+|. .+++.+.. . ....++ ++.+..... .......+++|+. .++.|+.+..+|..
T Consensus 168 ~~v~~yd---~~~~~W~--~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~--~~~~~~~v~~~d~d~~~~~W~~~~~~~~~ 240 (357)
T 2uvk_A 168 KFLLSFD---PSTQQWS--YAGESPWYGTAGAAVVNKGDKTWLINGEAK--PGLRTDAVFELDFTGNNLKWNKLAPVSSP 240 (357)
T ss_dssp CEEEEEE---TTTTEEE--EEEECSSCCCBSCEEEEETTEEEEECCEEE--TTEECCCEEEEECC---CEEEECCCSSTT
T ss_pred ccEEEEe---CCCCcEE--ECCCCCCCCcccccEEEECCEEEEEeeecC--CCcccCceEEEEecCCCCcEEecCCCCCC
Confidence 6899999 9999999 88765532 1 112222 444322211 1123456788887 88999999876533
Q ss_pred eecCCCCeeeeCCcEEEEEeecCC------------------CccEEEEEeCCCceeeee-cCCCCCCcCCcceeeccEE
Q 038993 185 YIARDSPGVYASGSLHWIVMAEYG------------------RHDFILALDLSDEAYKEL-PLPPPVLLETGCRVRANYF 245 (327)
Q Consensus 185 ~~~~~~~~v~~~G~lywl~~~~~~------------------~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~~~l 245 (327)
........+.++|.+|.++..... ....+..||+++++|+.+ ++|.... .. ..
T Consensus 241 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~-----~~---~~ 312 (357)
T 2uvk_A 241 DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRA-----YG---VS 312 (357)
T ss_dssp TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCB-----SS---EE
T ss_pred cccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcc-----cc---ee
Confidence 222223367889999999875311 113578999999999998 5664431 12 45
Q ss_pred EEeCCCcEEEEEecCCCcCCCeEEEEEEeeCCCCCCeEEEEE
Q 038993 246 GVLDNGCLCLVSNYGGGYRTPLSHVWVMTEYGVKDSWTKLFS 287 (327)
Q Consensus 246 ~~~~~g~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~ 287 (327)
+.++ |+|+++...... +...-+||+++=. .++|.....
T Consensus 313 ~~~~-~~i~v~GG~~~~-~~~~~~v~~l~~~--~~~~~~~~~ 350 (357)
T 2uvk_A 313 LPWN-NSLLIIGGETAG-GKAVTDSVLITVK--DNKVTVQNL 350 (357)
T ss_dssp EEET-TEEEEEEEECGG-GCEEEEEEEEEC---CCSCEEEC-
T ss_pred EEeC-CEEEEEeeeCCC-CCEeeeEEEEEEc--CcEeEeeec
Confidence 6677 999999987643 1224578877643 256877543
No 22
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.62 E-value=1.7e-05 Score=70.79 Aligned_cols=42 Identities=29% Similarity=0.454 Sum_probs=38.4
Q ss_pred CCCCCCcHHHHHHHHhcCCcchhhhheeccccchhhcCChhh
Q 038993 2 DDRDPLPLHIIDDILSRLHVKQLLRLRCVSKTWRDLIDGPDF 43 (327)
Q Consensus 2 ~~~~~LP~Dll~eIL~rLP~ksl~r~r~VcK~W~~li~~~~F 43 (327)
..+..||+|++.+||.+|+.+++.+++.|||+|+.++.++..
T Consensus 7 ~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred CChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 467899999999999999999999999999999999877653
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.37 E-value=0.0051 Score=60.17 Aligned_cols=124 Identities=10% Similarity=0.007 Sum_probs=76.9
Q ss_pred EEeccCCcEEeeecCCCCEEEEEcCCccccceeeccccCCCCCC---CceEEE-E--EEEEEEEeCCCCCCCccEEEEEE
Q 038993 96 VVGCCNGLLCIATNRLPQTLAIWTHLRESTAFYRRQRLPWIPKR---LVAFFM-G--LVRIARRSGDACFGGAAEVKVYS 169 (327)
Q Consensus 96 ~~~sc~GLlcl~~~~~~~~~~V~N~~~P~T~~~~~~~LP~~~~~---~~~~gf-g--vv~v~~~~~~~~~~~~~~~~Vys 169 (327)
.....+|-|.+........+.++| |.|++|. .+|+++.. .....+ + ++.+... .++......+++|+
T Consensus 248 ~~~~~~g~lyv~GG~~~~~v~~yd---~~t~~W~--~~~~~~~~R~~~s~~~~~dg~iyv~GG~--~~~~~~~~~~e~yd 320 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAKKTSLYD---SSSDSWI--PGPDMQVARGYQSSATMSDGRVFTIGGS--WSGGVFEKNGEVYS 320 (656)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEE---GGGTEEE--ECCCCSSCCSSCEEEECTTSCEEEECCC--CCSSSCCCCEEEEE
T ss_pred ccCCCCCCEEEeCCCCCCceEEec---CcCCcee--ECCCCCccccccceEEecCCeEEEEeCc--ccCCcccccceEeC
Confidence 344467777666533445799999 9999999 99876654 222233 2 4444321 12223457899999
Q ss_pred cCCCceEEcCCCCCce-e-cCCCCeeeeCCcEEEEEeecC-----CCccEEEEEeCCCceeeee
Q 038993 170 LARNSWKRIQDIPPCY-I-ARDSPGVYASGSLHWIVMAEY-----GRHDFILALDLSDEAYKEL 226 (327)
Q Consensus 170 ~~~~~Wr~~~~~p~~~-~-~~~~~~v~~~G~lywl~~~~~-----~~~~~il~fD~~~e~~~~i 226 (327)
..+++|+.+....... . ......+..++.+|.+...+. .....+..||++++.|...
T Consensus 321 ~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~ 384 (656)
T 1k3i_A 321 PSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKS 384 (656)
T ss_dssp TTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEE
T ss_pred CCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeec
Confidence 9999999985322111 1 111223447888888875432 1234689999999998643
No 24
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.33 E-value=0.0051 Score=60.70 Aligned_cols=149 Identities=9% Similarity=0.004 Sum_probs=92.4
Q ss_pred CEEEEEcCCccccceeeccccCCCCCC---CceEEE-E--EEEEEEEeCCCCCCCccEEEEEEcCCCceEEcCC---CCC
Q 038993 113 QTLAIWTHLRESTAFYRRQRLPWIPKR---LVAFFM-G--LVRIARRSGDACFGGAAEVKVYSLARNSWKRIQD---IPP 183 (327)
Q Consensus 113 ~~~~V~N~~~P~T~~~~~~~LP~~~~~---~~~~gf-g--vv~v~~~~~~~~~~~~~~~~Vys~~~~~Wr~~~~---~p~ 183 (327)
..+.++| |.|.+|. .+++++.. +....+ + ++.+... +. .. .+++|+..++.|+.+.. +|.
T Consensus 468 ~dv~~yd---~~t~~W~--~~~~~p~~R~~h~~~~~~~~~iyv~GG~---~~-~~--~v~~yd~~t~~W~~~~~~g~~p~ 536 (695)
T 2zwa_A 468 SDNWIFD---MKTREWS--MIKSLSHTRFRHSACSLPDGNVLILGGV---TE-GP--AMLLYNVTEEIFKDVTPKDEFFQ 536 (695)
T ss_dssp CCCEEEE---TTTTEEE--ECCCCSBCCBSCEEEECTTSCEEEECCB---CS-SC--SEEEEETTTTEEEECCCSSGGGG
T ss_pred ccEEEEe---CCCCcEE--ECCCCCCCcccceEEEEcCCEEEEECCC---CC-CC--CEEEEECCCCceEEccCCCCCCC
Confidence 4689999 9999999 98876654 222222 2 4444321 11 11 89999999999999874 332
Q ss_pred ceecCCCCeeeeC---CcEEEEEeecC---CCccEEEEEeCCCce------eeee-cCCCCCCcCCcceeeccEEEEeCC
Q 038993 184 CYIARDSPGVYAS---GSLHWIVMAEY---GRHDFILALDLSDEA------YKEL-PLPPPVLLETGCRVRANYFGVLDN 250 (327)
Q Consensus 184 ~~~~~~~~~v~~~---G~lywl~~~~~---~~~~~il~fD~~~e~------~~~i-~lP~~~~~~~~~~~~~~~l~~~~~ 250 (327)
.. ....++.++ |.+|.++.... .....+..||+.+.+ |+.+ +.|...+ ... ..+.+++
T Consensus 537 ~r--~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R----~~~---~~~~~~~ 607 (695)
T 2zwa_A 537 NS--LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQR----YGS---QIKYITP 607 (695)
T ss_dssp SC--CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCC----BSC---EEEEEET
T ss_pred cc--cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCc----ccc---eEEEeCC
Confidence 22 122235556 88999987632 123579999999999 7777 3332221 122 4455555
Q ss_pred CcEEEEEecCCCcC-CCeEEEEEEeeCCCCCCeE
Q 038993 251 GCLCLVSNYGGGYR-TPLSHVWVMTEYGVKDSWT 283 (327)
Q Consensus 251 g~L~~~~~~~~~~~-~~~l~iW~l~~~~~~~~W~ 283 (327)
|+|++++....... ...-+||+++-. ..+|+
T Consensus 608 ~~iyv~GG~~~~~~~~~~~~v~~yd~~--t~~W~ 639 (695)
T 2zwa_A 608 RKLLIVGGTSPSGLFDRTNSIISLDPL--SETLT 639 (695)
T ss_dssp TEEEEECCBCSSCCCCTTTSEEEEETT--TTEEE
T ss_pred CEEEEECCccCCCCCCCCCeEEEEECC--CCeEE
Confidence 89999987543210 124457777652 36798
No 25
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.11 E-value=0.0022 Score=62.73 Aligned_cols=151 Identities=11% Similarity=0.016 Sum_probs=88.3
Q ss_pred EEEEcCCccccceeeccccCCCCCC-CceEEE--E--EEEEEEEeCCC-C--CCCccEEEEEEcCCCceEEcCCCCCcee
Q 038993 115 LAIWTHLRESTAFYRRQRLPWIPKR-LVAFFM--G--LVRIARRSGDA-C--FGGAAEVKVYSLARNSWKRIQDIPPCYI 186 (327)
Q Consensus 115 ~~V~N~~~P~T~~~~~~~LP~~~~~-~~~~gf--g--vv~v~~~~~~~-~--~~~~~~~~Vys~~~~~Wr~~~~~p~~~~ 186 (327)
+...+ |.+++|. .+++.+.. ...... + ++.+.....+. . ......+.+|+..+++|+.+..+|....
T Consensus 168 ~~~~d---p~~~~W~--~~~~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~ 242 (656)
T 1k3i_A 168 YTAPQ---PGLGRWG--PTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD 242 (656)
T ss_dssp CCCCC---TTSCEEE--EEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC
T ss_pred cccCC---CCCCeee--eeccCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCC
Confidence 33457 8999999 87666543 211111 1 44443321110 0 1123478999999999998876553322
Q ss_pred cCCCC-eeeeCCcEEEEEeecCCCccEEEEEeCCCceeeee-cCCCCCCcCCcceeeccEEEEeCCCcEEEEEec-CCCc
Q 038993 187 ARDSP-GVYASGSLHWIVMAEYGRHDFILALDLSDEAYKEL-PLPPPVLLETGCRVRANYFGVLDNGCLCLVSNY-GGGY 263 (327)
Q Consensus 187 ~~~~~-~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~-~~~~ 263 (327)
..... .+..+|.+|.++.... ..+..||+.+++|+.+ ++|... ... ..+.+.||+|+++... ....
T Consensus 243 ~~~~~~~~~~~g~lyv~GG~~~---~~v~~yd~~t~~W~~~~~~~~~R-----~~~---s~~~~~dg~iyv~GG~~~~~~ 311 (656)
T 1k3i_A 243 MFCPGISMDGNGQIVVTGGNDA---KKTSLYDSSSDSWIPGPDMQVAR-----GYQ---SSATMSDGRVFTIGGSWSGGV 311 (656)
T ss_dssp CSSCEEEECTTSCEEEECSSST---TCEEEEEGGGTEEEECCCCSSCC-----SSC---EEEECTTSCEEEECCCCCSSS
T ss_pred CccccccCCCCCCEEEeCCCCC---CceEEecCcCCceeECCCCCccc-----ccc---ceEEecCCeEEEEeCcccCCc
Confidence 11111 2346899999987543 2699999999999988 344322 122 5667723999999873 3221
Q ss_pred CCCeEEEEEEeeCCCCCCeEEE
Q 038993 264 RTPLSHVWVMTEYGVKDSWTKL 285 (327)
Q Consensus 264 ~~~~l~iW~l~~~~~~~~W~~~ 285 (327)
....+++|-.+ ...|+++
T Consensus 312 ~~~~~e~yd~~----t~~W~~~ 329 (656)
T 1k3i_A 312 FEKNGEVYSPS----SKTWTSL 329 (656)
T ss_dssp CCCCEEEEETT----TTEEEEE
T ss_pred ccccceEeCCC----CCcceeC
Confidence 12344444322 3579886
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.08 E-value=0.00012 Score=70.40 Aligned_cols=36 Identities=17% Similarity=0.353 Sum_probs=29.5
Q ss_pred CCCCCCcHHHHHHHHhcCC-cchhhhheeccccchhh
Q 038993 2 DDRDPLPLHIIDDILSRLH-VKQLLRLRCVSKTWRDL 37 (327)
Q Consensus 2 ~~~~~LP~Dll~eIL~rLP-~ksl~r~r~VcK~W~~l 37 (327)
+.++.||+|++.+||.+|| .+++.+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4577899999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.49 E-value=0.00068 Score=65.23 Aligned_cols=33 Identities=12% Similarity=0.239 Sum_probs=31.2
Q ss_pred CCCcHHHHHHHHhcC-Ccchhhhheeccccchhh
Q 038993 5 DPLPLHIIDDILSRL-HVKQLLRLRCVSKTWRDL 37 (327)
Q Consensus 5 ~~LP~Dll~eIL~rL-P~ksl~r~r~VcK~W~~l 37 (327)
..||||++.+||.+| |.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 369999999999999 899999999999999887
No 28
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=87.41 E-value=9.9 Score=32.25 Aligned_cols=107 Identities=13% Similarity=0.013 Sum_probs=65.0
Q ss_pred eeCCcEEEEEeecCCCccEEEEEeCCCcee-eeecCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCcCCCeEEEEE
Q 038993 194 YASGSLHWIVMAEYGRHDFILALDLSDEAY-KELPLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGYRTPLSHVWV 272 (327)
Q Consensus 194 ~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~ 272 (327)
+.+|.||--+..+. .-.|..+|+++.+- ..+++|... +.. .+...+ ++|+++.-.++ .+|+
T Consensus 50 ~~~~~LyestG~~g--~S~v~~vD~~Tgkv~~~~~l~~~~-----Fge---Git~~g-~~ly~ltw~~~-------~v~v 111 (262)
T 3nol_A 50 YRNGYFYESTGLNG--RSSIRKVDIESGKTLQQIELGKRY-----FGE---GISDWK-DKIVGLTWKNG-------LGFV 111 (262)
T ss_dssp EETTEEEEEEEETT--EEEEEEECTTTCCEEEEEECCTTC-----CEE---EEEEET-TEEEEEESSSS-------EEEE
T ss_pred EECCEEEEECCCCC--CceEEEEECCCCcEEEEEecCCcc-----cee---EEEEeC-CEEEEEEeeCC-------EEEE
Confidence 44787777666531 33699999998765 556777543 222 466667 89999865443 4556
Q ss_pred EeeCCCCCCeEEEEEEcCCCCCCCCcccCCCcccccccCCCceEEEEecCCCC
Q 038993 273 MTEYGVKDSWTKLFSILEEQVISPSPEFYDYSLPFESLEPPSLLRGWHPTSFG 325 (327)
Q Consensus 273 l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (327)
.+- ..-.++.+|+... .+-.-..++ ...+++-+ ...|.+.||+++.
T Consensus 112 ~D~----~t~~~~~ti~~~~-eG~glt~dg-~~L~~SdG-s~~i~~iDp~T~~ 157 (262)
T 3nol_A 112 WNI----RNLRQVRSFNYDG-EGWGLTHND-QYLIMSDG-TPVLRFLDPESLT 157 (262)
T ss_dssp EET----TTCCEEEEEECSS-CCCCEEECS-SCEEECCS-SSEEEEECTTTCS
T ss_pred EEC----ccCcEEEEEECCC-CceEEecCC-CEEEEECC-CCeEEEEcCCCCe
Confidence 553 3455667777643 221112233 33344444 6789999999863
No 29
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=78.18 E-value=29 Score=28.98 Aligned_cols=106 Identities=14% Similarity=0.067 Sum_probs=64.3
Q ss_pred eeCCcEEEEEeecCCCccEEEEEeCCCcee-eeecCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCcCCCeEEEEE
Q 038993 194 YASGSLHWIVMAEYGRHDFILALDLSDEAY-KELPLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGYRTPLSHVWV 272 (327)
Q Consensus 194 ~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~ 272 (327)
+.+|.||--+... ....|..+|+++.+- +.+++|... +.. .+...+ ++|+++.-.++ .+|+
T Consensus 28 ~~~~~LyestG~~--g~S~v~~vD~~tgkv~~~~~l~~~~-----fge---Gi~~~~-~~ly~ltw~~~-------~v~v 89 (243)
T 3mbr_X 28 YLRGHLYESTGET--GRSSVRKVDLETGRILQRAEVPPPY-----FGA---GIVAWR-DRLIQLTWRNH-------EGFV 89 (243)
T ss_dssp EETTEEEEEECCT--TSCEEEEEETTTCCEEEEEECCTTC-----CEE---EEEEET-TEEEEEESSSS-------EEEE
T ss_pred EECCEEEEECCCC--CCceEEEEECCCCCEEEEEeCCCCc-----cee---EEEEeC-CEEEEEEeeCC-------EEEE
Confidence 4466777655543 134799999988766 556887654 222 556667 99999875443 4556
Q ss_pred EeeCCCCCCeEEEEEEcCCCCCCCCcccCCCcccccccCCCceEEEEecCCC
Q 038993 273 MTEYGVKDSWTKLFSILEEQVISPSPEFYDYSLPFESLEPPSLLRGWHPTSF 324 (327)
Q Consensus 273 l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (327)
.+- ..-.++.+|.... .+-.-.+++. ..+.+-+ ...|.++||+++
T Consensus 90 ~D~----~tl~~~~ti~~~~-~Gwglt~dg~-~L~vSdg-s~~l~~iDp~t~ 134 (243)
T 3mbr_X 90 YDL----ATLTPRARFRYPG-EGWALTSDDS-HLYMSDG-TAVIRKLDPDTL 134 (243)
T ss_dssp EET----TTTEEEEEEECSS-CCCEEEECSS-CEEEECS-SSEEEEECTTTC
T ss_pred EEC----CcCcEEEEEeCCC-CceEEeeCCC-EEEEECC-CCeEEEEeCCCC
Confidence 553 3456777777653 1111122333 3344444 777999999886
No 30
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=73.10 E-value=42 Score=28.43 Aligned_cols=103 Identities=9% Similarity=-0.075 Sum_probs=61.9
Q ss_pred eeCCcEEEEEeecCCCccEEEEEeCCCcee-eeecCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCcCCCeEEEEE
Q 038993 194 YASGSLHWIVMAEYGRHDFILALDLSDEAY-KELPLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGYRTPLSHVWV 272 (327)
Q Consensus 194 ~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~ 272 (327)
+.++.||.-+..+. .|..+|+++.+- +.+ +|... +.. .+...+ ++|+++.-.++ .+|+
T Consensus 62 ~~~~~Ly~stG~~g----~v~~iD~~Tgkv~~~~-l~~~~-----Fge---Git~~g-~~Ly~ltw~~~-------~v~V 120 (268)
T 3nok_A 62 FHQGHFFESTGHQG----TLRQLSLESAQPVWME-RLGNI-----FAE---GLASDG-ERLYQLTWTEG-------LLFT 120 (268)
T ss_dssp EETTEEEEEETTTT----EEEECCSSCSSCSEEE-ECTTC-----CEE---EEEECS-SCEEEEESSSC-------EEEE
T ss_pred EECCEEEEEcCCCC----EEEEEECCCCcEEeEE-CCCCc-----cee---EEEEeC-CEEEEEEccCC-------EEEE
Confidence 34677777666653 499999988766 445 66533 222 456666 89999865443 4566
Q ss_pred EeeCCCCCCeEEEEEEcCCCCCCCCcccCCCcccccccCCCceEEEEecCCC
Q 038993 273 MTEYGVKDSWTKLFSILEEQVISPSPEFYDYSLPFESLEPPSLLRGWHPTSF 324 (327)
Q Consensus 273 l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (327)
.+- ..-.++.+|+... .+-.-.+++. ..+++- ....|.++||+++
T Consensus 121 ~D~----~Tl~~~~ti~~~~-eGwGLt~Dg~-~L~vSd-Gs~~l~~iDp~T~ 165 (268)
T 3nok_A 121 WSG----MPPQRERTTRYSG-EGWGLCYWNG-KLVRSD-GGTMLTFHEPDGF 165 (268)
T ss_dssp EET----TTTEEEEEEECSS-CCCCEEEETT-EEEEEC-SSSEEEEECTTTC
T ss_pred EEC----CcCcEEEEEeCCC-ceeEEecCCC-EEEEEC-CCCEEEEEcCCCC
Confidence 653 3456677777642 1111122333 334444 4888999999886
No 31
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=67.37 E-value=66 Score=28.35 Aligned_cols=146 Identities=12% Similarity=0.130 Sum_probs=71.7
Q ss_pred ceEEEe-ccCCcEEeeecCCCCEEEEEcCCccccceeeccccCCCC---CCCceEEEE----EEEEEEEeCCCCCCCccE
Q 038993 93 WIEVVG-CCNGLLCIATNRLPQTLAIWTHLRESTAFYRRQRLPWIP---KRLVAFFMG----LVRIARRSGDACFGGAAE 164 (327)
Q Consensus 93 ~~~~~~-sc~GLlcl~~~~~~~~~~V~N~~~P~T~~~~~~~LP~~~---~~~~~~gfg----vv~v~~~~~~~~~~~~~~ 164 (327)
...+++ |.+++|.... ++.++||| ..|++.. .+-... .....+.|. .+... .....
T Consensus 107 y~~~l~wS~~n~lAvgl---d~tV~lWd---~~tg~~~--~~~~~~~~~~~V~sv~fspdg~~lasg--------s~Dg~ 170 (420)
T 4gga_A 107 YLNLVDWSSGNVLAVAL---DNSVYLWS---ASSGDIL--QLLQMEQPGEYISSVAWIKEGNYLAVG--------TSSAE 170 (420)
T ss_dssp TCBCEEECTTSEEEEEE---TTEEEEEE---TTTCCEE--EEEECCSTTCCEEEEEECTTSSEEEEE--------ETTSC
T ss_pred cceeEEECCCCEEEEEe---CCEEEEEE---CCCCCEE--EEEEecCCCCcEEEEEECCCCCEEEEE--------ECCCe
Confidence 334444 4566665544 78999999 9999877 432211 111123332 22111 24566
Q ss_pred EEEEEcCCCceEE-cCCCCCceecCCCCeeeeCCcEEEEEeecCCCccEEEEEeCCCceeeeecCCCCCCcCCcceeecc
Q 038993 165 VKVYSLARNSWKR-IQDIPPCYIARDSPGVYASGSLHWIVMAEYGRHDFILALDLSDEAYKELPLPPPVLLETGCRVRAN 243 (327)
Q Consensus 165 ~~Vys~~~~~Wr~-~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~~ 243 (327)
+.|++..++.-.. ...... ....+..+|.+-..+..+ ..+..+|..........+.... ....
T Consensus 171 v~iWd~~~~~~~~~~~~h~~-----~v~~~s~~~~~l~sgs~d----~~i~~~d~~~~~~~~~~~~~h~----~~~~--- 234 (420)
T 4gga_A 171 VQLWDVQQQKRLRNMTSHSA-----RVGSLSWNSYILSSGSRS----GHIHHHDVRVAEHHVATLSGHS----QEVC--- 234 (420)
T ss_dssp EEEEETTTTEEEEEECCCSS-----CEEEEEEETTEEEEEETT----SEEEEEETTSSSCEEEEEECCS----SCEE---
T ss_pred EEEEEcCCCcEEEEEeCCCC-----ceEEEeeCCCEEEEEeCC----CceeEeeecccceeeEEecccc----ccee---
Confidence 8888887764321 111111 111344455544433333 3677777766544333222211 1111
Q ss_pred EEEEeCCCcEEEEEecCCCcCCCeEEEEEEee
Q 038993 244 YFGVLDNGCLCLVSNYGGGYRTPLSHVWVMTE 275 (327)
Q Consensus 244 ~l~~~~~g~L~~~~~~~~~~~~~~l~iW~l~~ 275 (327)
.+....+|...+....++ .+.||-...
T Consensus 235 ~~~~~~~g~~l~s~~~D~-----~v~i~~~~~ 261 (420)
T 4gga_A 235 GLRWAPDGRHLASGGNDN-----LVNVWPSAP 261 (420)
T ss_dssp EEEECTTSSEEEEEETTS-----CEEEEESSC
T ss_pred eeeecCCCCeeeeeeccc-----cceEEeecc
Confidence 333333466665555544 788887654
No 32
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=66.67 E-value=47 Score=28.04 Aligned_cols=61 Identities=10% Similarity=-0.015 Sum_probs=37.8
Q ss_pred eCCcEEEEEeecCCCccEEEEEeCCCceeeeecCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCcCCCeEEEEEEe
Q 038993 195 ASGSLHWIVMAEYGRHDFILALDLSDEAYKELPLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGYRTPLSHVWVMT 274 (327)
Q Consensus 195 ~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~l~ 274 (327)
-+|.+||...... .|..+|..++.-..+..+.. -. .+....||+|++...... ...|+.++
T Consensus 41 ~~g~lyv~d~~~~----~I~~~d~~g~~~~~~~~~~~-------p~---gia~~~dG~l~vad~~~~-----~~~v~~~d 101 (306)
T 2p4o_A 41 PDGTIFVTNHEVG----EIVSITPDGNQQIHATVEGK-------VS---GLAFTSNGDLVATGWNAD-----SIPVVSLV 101 (306)
T ss_dssp TTSCEEEEETTTT----EEEEECTTCCEEEEEECSSE-------EE---EEEECTTSCEEEEEECTT-----SCEEEEEE
T ss_pred CCCCEEEEeCCCC----eEEEECCCCceEEEEeCCCC-------ce---eEEEcCCCcEEEEeccCC-----cceEEEEc
Confidence 3789999875443 79999998765444454421 11 455555689877664332 44566665
No 33
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=62.53 E-value=1.2e+02 Score=29.52 Aligned_cols=144 Identities=8% Similarity=0.074 Sum_probs=66.9
Q ss_pred CccEEEEEEcCCCceEEcCCCCCceecCCCCeeee--C--CcEEEEEeecCCCccEEEEEeCCCcee-eeecCCCCCCcC
Q 038993 161 GAAEVKVYSLARNSWKRIQDIPPCYIARDSPGVYA--S--GSLHWIVMAEYGRHDFILALDLSDEAY-KELPLPPPVLLE 235 (327)
Q Consensus 161 ~~~~~~Vys~~~~~Wr~~~~~p~~~~~~~~~~v~~--~--G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~ 235 (327)
....+.+++..++.|..+.....+.. .-..+.+ + |.+...+..+. .|..+|+.+..- ..+.+....
T Consensus 75 ~Dg~I~vwd~~~~~~~~~~~~~~h~~--~V~~v~~sp~~~~~~l~sgs~dg----~I~vwdl~~~~~~~~~~~~~~~--- 145 (753)
T 3jro_A 75 YDGKVLIWKEENGRWSQIAVHAVHSA--SVNSVQWAPHEYGPLLLVASSDG----KVSVVEFKENGTTSPIIIDAHA--- 145 (753)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSS--CEEEEEECCGGGCSEEEEEETTS----EEEEEECCSSSCCCCEEEECCS---
T ss_pred CCCeEEEEECCCCcccccccccCCCC--CeEEEEECCCCCCCEEEEEeCCC----cEEEEEeecCCCcceeEeecCC---
Confidence 35678888888887766543221110 0011222 2 55544444443 688888876522 111111111
Q ss_pred CcceeeccEEEEeC-------------CCcEEEEEecCCCcCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCCcccCC
Q 038993 236 TGCRVRANYFGVLD-------------NGCLCLVSNYGGGYRTPLSHVWVMTEYGVKDSWTKLFSILEEQVISPSPEFYD 302 (327)
Q Consensus 236 ~~~~~~~~~l~~~~-------------~g~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~ 302 (327)
.... .+.... ||.+.+....++ .+.||-+... ...+....++....-.-..-.|..
T Consensus 146 ~~v~----~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg-----~I~iwd~~~~--~~~~~~~~~~~~h~~~V~~l~~sp 214 (753)
T 3jro_A 146 IGVN----SASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSD--AQTYVLESTLEGHSDWVRDVAWSP 214 (753)
T ss_dssp SCEE----EEEECCCC---------CGGGCCEEEEETTS-----CEEEEEEETT--TTEEEEEEEECCCSSCEEEEEECC
T ss_pred CceE----EEEecCcccccccccccCCCCCEEEEEECCC-----eEEEEeccCC--cccceeeeeecCCCCcEEEEEecc
Confidence 0000 121111 255666555554 8999988763 234555555432211000012221
Q ss_pred C---cccccccCCCceEEEEecCCC
Q 038993 303 Y---SLPFESLEPPSLLRGWHPTSF 324 (327)
Q Consensus 303 ~---~~~~~~~~~~~~~~~~~~~~~ 324 (327)
. .-.+++-.....+.+||..+.
T Consensus 215 ~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 215 TVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp CCSSSEEEEEEESSSCEEEEEESSS
T ss_pred CCCCCCEEEEEecCCEEEEecCCCC
Confidence 1 122334455667778877653
No 34
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=58.23 E-value=1.3e+02 Score=29.28 Aligned_cols=82 Identities=10% Similarity=0.066 Sum_probs=44.4
Q ss_pred CcEEEEEeecCCCccEEEEEeCCCceeeeecCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCcCCCeEEEEEEeeC
Q 038993 197 GSLHWIVMAEYGRHDFILALDLSDEAYKELPLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGYRTPLSHVWVMTEY 276 (327)
Q Consensus 197 G~lywl~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~l~~~ 276 (327)
|.++.-..........++.=|=..++|+....+.... ...... .+++..+|+|.++...... ...+..-.|.
T Consensus 474 GrLv~p~~~~~~~~s~i~~SdDgG~TW~~~~~~~p~~-~~~~e~---~vve~~dG~L~~~~R~~~G----~~~v~~S~Dg 545 (679)
T 2sli_A 474 GRLLVPLYSKSSAELGFMYSDDHGDNWTYVEADNLTG-GATAEA---QIVEMPDGSLKTYLRTGSN----CIAEVTSIDG 545 (679)
T ss_dssp TCEEEEEEEESSCSEEEEEESSTTSSCEEEECCCCCS-CCCCCE---EEEECTTSCEEEEECCSSS----SCEEEEESST
T ss_pred CEEEEEEEecCCCEEEEEEECCCCCceEeCccCCCCC-CCccce---EEEEeCCCEEEEEEEeCCC----CEEEEEEcCC
Confidence 7777644332111112222222457898874432111 111234 7888877999887765432 4455555554
Q ss_pred CCCCCeEEEEEE
Q 038993 277 GVKDSWTKLFSI 288 (327)
Q Consensus 277 ~~~~~W~~~~~i 288 (327)
| .+|++...+
T Consensus 546 G--~TWt~~~~~ 555 (679)
T 2sli_A 546 G--ETWSDRVPL 555 (679)
T ss_dssp T--SSCCCCEEC
T ss_pred C--cCCCCCccc
Confidence 4 689997755
No 35
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=57.20 E-value=88 Score=26.41 Aligned_cols=109 Identities=11% Similarity=0.084 Sum_probs=56.0
Q ss_pred CccEEEEEEcCCCceEEcCCCCCceecCCCCeeeeCCcEEEEEeecCCCccEEEEEeCCCceeeee-cCCCCCCcCCcce
Q 038993 161 GAAEVKVYSLARNSWKRIQDIPPCYIARDSPGVYASGSLHWIVMAEYGRHDFILALDLSDEAYKEL-PLPPPVLLETGCR 239 (327)
Q Consensus 161 ~~~~~~Vys~~~~~Wr~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~ 239 (327)
....+.+|+..++.++.+..+..+......-...-+|.+...+..+. .|..+|+++..+... .+.... ....
T Consensus 28 ~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~~~~~~---~~v~ 100 (372)
T 1k8k_C 28 NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR----NAYVWTLKGRTWKPTLVILRIN---RAAR 100 (372)
T ss_dssp SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTS----CEEEEEEETTEEEEEEECCCCS---SCEE
T ss_pred CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCC----eEEEEECCCCeeeeeEEeecCC---Ccee
Confidence 35678888888887655543221110000001122455544444432 588889887765433 222221 1111
Q ss_pred eeccEEEEeCCCcEEEEEecCCCcCCCeEEEEEEeeCCCCCCeEEEEEE
Q 038993 240 VRANYFGVLDNGCLCLVSNYGGGYRTPLSHVWVMTEYGVKDSWTKLFSI 288 (327)
Q Consensus 240 ~~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i 288 (327)
.+.-..+|.+.++...++ .+.||-++.. ..|.....+
T Consensus 101 ----~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~---~~~~~~~~~ 137 (372)
T 1k8k_C 101 ----CVRWAPNEKKFAVGSGSR-----VISICYFEQE---NDWWVCKHI 137 (372)
T ss_dssp ----EEEECTTSSEEEEEETTS-----SEEEEEEETT---TTEEEEEEE
T ss_pred ----EEEECCCCCEEEEEeCCC-----EEEEEEecCC---Ccceeeeee
Confidence 333344476666665554 8999998862 345444444
No 36
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=54.55 E-value=97 Score=26.11 Aligned_cols=143 Identities=8% Similarity=0.084 Sum_probs=66.9
Q ss_pred ccEEEEEEcCCCceEEcCCCCCceecCCCCeeee--C--CcEEEEEeecCCCccEEEEEeCCCcee-eeecCCCCCCcCC
Q 038993 162 AAEVKVYSLARNSWKRIQDIPPCYIARDSPGVYA--S--GSLHWIVMAEYGRHDFILALDLSDEAY-KELPLPPPVLLET 236 (327)
Q Consensus 162 ~~~~~Vys~~~~~Wr~~~~~p~~~~~~~~~~v~~--~--G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~ 236 (327)
...+.||+..++.|..+........ .-..+.+ + |.+...+..+. .|..+|+.+..- ..+.+.... .
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~~~d~----~i~v~d~~~~~~~~~~~~~~~~---~ 148 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVHSA--SVNSVQWAPHEYGPLLLVASSDG----KVSVVEFKENGTTSPIIIDAHA---I 148 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSS--CEEEEEECCGGGCSEEEEEETTS----EEEEEECCTTSCCCEEEEECCT---T
T ss_pred CCEEEEEEcCCCceeEeeeecCCCc--ceEEEEeCCCCCCCEEEEecCCC----cEEEEecCCCCceeeEEecCCC---C
Confidence 4578889998888766543221110 0011222 2 44444444432 688888876532 222211111 0
Q ss_pred cceeeccEEEEeC-------------CCcEEEEEecCCCcCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCCcccCCC
Q 038993 237 GCRVRANYFGVLD-------------NGCLCLVSNYGGGYRTPLSHVWVMTEYGVKDSWTKLFSILEEQVISPSPEFYDY 303 (327)
Q Consensus 237 ~~~~~~~~l~~~~-------------~g~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~ 303 (327)
... .+.-.. ||.+.+....++ .+.||-+... ...|.....+.-..-.-....|...
T Consensus 149 ~v~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~--~~~~~~~~~~~~h~~~v~~~~~sp~ 217 (379)
T 3jrp_A 149 GVN----SASWAPATIEEDGEHNGTKESRKFVTGGADN-----LVKIWKYNSD--AQTYVLESTLEGHSDWVRDVAWSPT 217 (379)
T ss_dssp CEE----EEEECCCC----------CTTCEEEEEETTS-----CEEEEEEETT--TTEEEEEEEECCCSSCEEEEEECCC
T ss_pred ceE----EEEEcCccccccccccCCCCCCEEEEEeCCC-----eEEEEEecCC--CcceeeEEEEecccCcEeEEEECCC
Confidence 011 222221 366666666555 8999988752 2456666555432111001122211
Q ss_pred ---cccccccCCCceEEEEecCCC
Q 038993 304 ---SLPFESLEPPSLLRGWHPTSF 324 (327)
Q Consensus 304 ---~~~~~~~~~~~~~~~~~~~~~ 324 (327)
.-.+++-.....|.+|+..+.
T Consensus 218 ~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 218 VLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp CSSSEEEEEEETTSCEEEEEESST
T ss_pred CCCCCeEEEEeCCCEEEEEeCCCC
Confidence 112333444556777776553
No 37
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=53.40 E-value=1e+02 Score=26.11 Aligned_cols=135 Identities=9% Similarity=-0.015 Sum_probs=68.8
Q ss_pred CccEEEEEEcCCCceEEcC-----CCCCceecCCCCee-eeCCcEEEEEeecCCCccEEEEEeCCCcee-eeecCCCCCC
Q 038993 161 GAAEVKVYSLARNSWKRIQ-----DIPPCYIARDSPGV-YASGSLHWIVMAEYGRHDFILALDLSDEAY-KELPLPPPVL 233 (327)
Q Consensus 161 ~~~~~~Vys~~~~~Wr~~~-----~~p~~~~~~~~~~v-~~~G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~ 233 (327)
....+.+|+..++.....- ..+.. ....++ .-++.+|....... .|..+|..+.+. ..++ ...
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg---~~~~~i~~~~~~lyv~~~~~~----~v~viD~~t~~~~~~i~--~~~- 84 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLG---DVAQSMVIRDGIGWIVVNNSH----VIFAIDINTFKEVGRIT--GFT- 84 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCB---SCEEEEEEETTEEEEEEGGGT----EEEEEETTTCCEEEEEE--CCS-
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccC---ccceEEEEECCEEEEEEcCCC----EEEEEECcccEEEEEcC--CCC-
Confidence 3678888998888764321 00111 001122 34677777776543 799999998766 4452 111
Q ss_pred cCCcceeeccEEEEeCCCcEEEEEecCCCcCCCeEEEEEEeeCCCCCCeEEEEEEcCCC------CCCCCcccCCCcccc
Q 038993 234 LETGCRVRANYFGVLDNGCLCLVSNYGGGYRTPLSHVWVMTEYGVKDSWTKLFSILEEQ------VISPSPEFYDYSLPF 307 (327)
Q Consensus 234 ~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~------~~~~~~~~~~~~~~~ 307 (327)
. .. .+....||+|++.....+ .+.+|-++ ......+|.... .+..+.. .+..+.+
T Consensus 85 --~--p~---~i~~~~~g~lyv~~~~~~-----~v~~iD~~------t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv 145 (328)
T 3dsm_A 85 --S--PR---YIHFLSDEKAYVTQIWDY-----RIFIINPK------TYEITGYIECPDMDMESGSTEQMVQ-YGKYVYV 145 (328)
T ss_dssp --S--EE---EEEEEETTEEEEEEBSCS-----EEEEEETT------TTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEE
T ss_pred --C--Cc---EEEEeCCCeEEEEECCCC-----eEEEEECC------CCeEEEEEEcCCccccCCCcceEEE-ECCEEEE
Confidence 1 11 455533488877764333 55544222 233444555443 2221122 3333333
Q ss_pred cccCCCceEEEEecCCC
Q 038993 308 ESLEPPSLLRGWHPTSF 324 (327)
Q Consensus 308 ~~~~~~~~~~~~~~~~~ 324 (327)
...+.+..+.++|+++.
T Consensus 146 ~~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 146 NCWSYQNRILKIDTETD 162 (328)
T ss_dssp EECTTCCEEEEEETTTT
T ss_pred EcCCCCCEEEEEECCCC
Confidence 33434567788887763
No 38
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=50.49 E-value=1.2e+02 Score=25.94 Aligned_cols=132 Identities=11% Similarity=0.070 Sum_probs=62.4
Q ss_pred CCCEEEEEcCCccccceeeccccCCCCCCCceEEEE----EEEEEEEeCCCCCCCccEEEEEEcCCCceEEcCCCCCcee
Q 038993 111 LPQTLAIWTHLRESTAFYRRQRLPWIPKRLVAFFMG----LVRIARRSGDACFGGAAEVKVYSLARNSWKRIQDIPPCYI 186 (327)
Q Consensus 111 ~~~~~~V~N~~~P~T~~~~~~~LP~~~~~~~~~gfg----vv~v~~~~~~~~~~~~~~~~Vys~~~~~Wr~~~~~p~~~~ 186 (327)
.++.+.||| ..+++... .++... ....+.|. .+.+.. .....+.+++..++.-...-..+....
T Consensus 10 ~d~~v~v~d---~~~~~~~~-~~~~~~-~~~~~~~s~dg~~l~~~~-------~~d~~i~v~d~~~~~~~~~~~~~~~v~ 77 (391)
T 1l0q_A 10 ESDNISVID---VTSNKVTA-TIPVGS-NPMGAVISPDGTKVYVAN-------AHSNDVSIIDTATNNVIATVPAGSSPQ 77 (391)
T ss_dssp TTTEEEEEE---TTTTEEEE-EEECSS-SEEEEEECTTSSEEEEEE-------GGGTEEEEEETTTTEEEEEEECSSSEE
T ss_pred CCCEEEEEE---CCCCeEEE-EeecCC-CcceEEECCCCCEEEEEC-------CCCCeEEEEECCCCeEEEEEECCCCcc
Confidence 567899999 88877661 222221 11112222 121221 234578888888775433211111110
Q ss_pred cCCCCeeeeCCcEEEEEeecCCCccEEEEEeCCCceeeee-cCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCcCC
Q 038993 187 ARDSPGVYASGSLHWIVMAEYGRHDFILALDLSDEAYKEL-PLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGYRT 265 (327)
Q Consensus 187 ~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~ 265 (327)
.-...-+|..-+++... ...|..+|+.+.+.... ..... . . .+....||+..++......
T Consensus 78 ---~~~~spdg~~l~~~~~~---~~~v~v~d~~~~~~~~~~~~~~~------~-~---~~~~s~dg~~l~~~~~~~~--- 138 (391)
T 1l0q_A 78 ---GVAVSPDGKQVYVTNMA---SSTLSVIDTTSNTVAGTVKTGKS------P-L---GLALSPDGKKLYVTNNGDK--- 138 (391)
T ss_dssp ---EEEECTTSSEEEEEETT---TTEEEEEETTTTEEEEEEECSSS------E-E---EEEECTTSSEEEEEETTTT---
T ss_pred ---ceEECCCCCEEEEEECC---CCEEEEEECCCCeEEEEEeCCCC------c-c---eEEECCCCCEEEEEeCCCC---
Confidence 00122245533333322 13699999988765332 32211 1 1 3444445664433443333
Q ss_pred CeEEEEEEe
Q 038993 266 PLSHVWVMT 274 (327)
Q Consensus 266 ~~l~iW~l~ 274 (327)
.+.+|-++
T Consensus 139 -~v~~~d~~ 146 (391)
T 1l0q_A 139 -TVSVINTV 146 (391)
T ss_dssp -EEEEEETT
T ss_pred -EEEEEECC
Confidence 88888654
No 39
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=46.15 E-value=1.3e+02 Score=25.22 Aligned_cols=79 Identities=19% Similarity=0.190 Sum_probs=44.4
Q ss_pred eCCcEEEEEeecCCCccEEEEEeCCCceeeeecC-CCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCcCCCeEEEEEE
Q 038993 195 ASGSLHWIVMAEYGRHDFILALDLSDEAYKELPL-PPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGYRTPLSHVWVM 273 (327)
Q Consensus 195 ~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~l-P~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~l 273 (327)
-+|.+|...... ....|..||+.+.+.+.+.. +... .. -. .+....||+..++...... .+.+|.+
T Consensus 49 pdg~l~~~~~~~--~~~~v~~~~~~~g~~~~~~~~~~~~--~~--p~---~~a~spdg~~l~~~~~~~~----~v~v~~~ 115 (347)
T 3hfq_A 49 AKDCLYSVDKED--DEGGIAAWQIDGQTAHKLNTVVAPG--TP--PA---YVAVDEARQLVYSANYHKG----TAEVMKI 115 (347)
T ss_dssp TTCEEEEEEEET--TEEEEEEEEEETTEEEEEEEEEEES--CC--CS---EEEEETTTTEEEEEETTTT----EEEEEEE
T ss_pred cCCeEEEEEecC--CCceEEEEEecCCcEEEeeeeecCC--CC--CE---EEEECCCCCEEEEEeCCCC----EEEEEEe
Confidence 378887776631 11369999998877766532 2111 11 11 4555556875444443333 8999999
Q ss_pred eeCCCCCCeEEEEEEc
Q 038993 274 TEYGVKDSWTKLFSIL 289 (327)
Q Consensus 274 ~~~~~~~~W~~~~~i~ 289 (327)
+..+ .......+.
T Consensus 116 ~~~g---~~~~~~~~~ 128 (347)
T 3hfq_A 116 AADG---ALTLTDTVQ 128 (347)
T ss_dssp CTTS---CEEEEEEEE
T ss_pred CCCC---Ceeecceee
Confidence 7533 344444443
No 40
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=45.23 E-value=1.4e+02 Score=25.28 Aligned_cols=105 Identities=12% Similarity=0.179 Sum_probs=47.3
Q ss_pred ccEEEEEEcCCCceEEcCCCCCceecCCCCeee--eCCcEEEEEeecCCCccEEEEEeCCCce-eeee-cCCCCCCcCCc
Q 038993 162 AAEVKVYSLARNSWKRIQDIPPCYIARDSPGVY--ASGSLHWIVMAEYGRHDFILALDLSDEA-YKEL-PLPPPVLLETG 237 (327)
Q Consensus 162 ~~~~~Vys~~~~~Wr~~~~~p~~~~~~~~~~v~--~~G~lywl~~~~~~~~~~il~fD~~~e~-~~~i-~lP~~~~~~~~ 237 (327)
...+.+++..++.++.+..+..+... -..+. -+|.+...+..+ ..|..+|+.++. ...+ .+.... ..
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~~~--v~~v~~sp~~~~l~s~s~D----~~v~iwd~~~~~~~~~~~~~~~h~---~~ 152 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHENE--VKSVAWAPSGNLLATCSRD----KSVWVWEVDEEDEYECVSVLNSHT---QD 152 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCSSC--EEEEEECTTSSEEEEEETT----SCEEEEEECTTSCEEEEEEECCCC---SC
T ss_pred CCcEEEEEccCCCeEEEEEccCCCCC--ceEEEEeCCCCEEEEEECC----CeEEEEECCCCCCeEEEEEecCcC---CC
Confidence 45567777776665443322111000 00111 145544433333 257778876542 2222 111111 11
Q ss_pred ceeeccEEEEeCCCcEEEEEecCCCcCCCeEEEEEEeeCCCCCCeEEEEEE
Q 038993 238 CRVRANYFGVLDNGCLCLVSNYGGGYRTPLSHVWVMTEYGVKDSWTKLFSI 288 (327)
Q Consensus 238 ~~~~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i 288 (327)
.. .+.-..+|.+.+....++ .+.||-++. ..|....++
T Consensus 153 v~----~~~~~p~~~~l~s~s~d~-----~i~~w~~~~----~~~~~~~~~ 190 (345)
T 3fm0_A 153 VK----HVVWHPSQELLASASYDD-----TVKLYREEE----DDWVCCATL 190 (345)
T ss_dssp EE----EEEECSSSSCEEEEETTS-----CEEEEEEET----TEEEEEEEE
T ss_pred eE----EEEECCCCCEEEEEeCCC-----cEEEEEecC----CCEEEEEEe
Confidence 11 333333466655555544 899998764 346555444
No 41
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=44.87 E-value=1.4e+02 Score=25.06 Aligned_cols=104 Identities=11% Similarity=0.029 Sum_probs=60.0
Q ss_pred CcEEEEEeecCCCccEEEEEeCCCcee-eeecCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCcCCCeEEEEEEee
Q 038993 197 GSLHWIVMAEYGRHDFILALDLSDEAY-KELPLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGYRTPLSHVWVMTE 275 (327)
Q Consensus 197 G~lywl~~~~~~~~~~il~fD~~~e~~-~~i~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~l~~ 275 (327)
|.+|.-.... ....|..+|+.+.+- ..+++|... +.. .+...+ ++|++..-.++ . +++.+-
T Consensus 32 g~Lyvstg~~--~~s~v~~iD~~tg~v~~~i~l~~~~-----fge---Gi~~~g-~~lyv~t~~~~-----~--v~viD~ 93 (266)
T 2iwa_A 32 DTLFESTGLY--GRSSVRQVALQTGKVENIHKMDDSY-----FGE---GLTLLN-EKLYQVVWLKN-----I--GFIYDR 93 (266)
T ss_dssp TEEEEEECST--TTCEEEEEETTTCCEEEEEECCTTC-----CEE---EEEEET-TEEEEEETTCS-----E--EEEEET
T ss_pred CeEEEECCCC--CCCEEEEEECCCCCEEEEEecCCCc-----ceE---EEEEeC-CEEEEEEecCC-----E--EEEEEC
Confidence 6777765431 124799999987665 455776533 111 344456 88888875443 3 555553
Q ss_pred CCCCCCeEEEEEEcCCCCCCCCcccCCCcccccccCCCceEEEEecCCC
Q 038993 276 YGVKDSWTKLFSILEEQVISPSPEFYDYSLPFESLEPPSLLRGWHPTSF 324 (327)
Q Consensus 276 ~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (327)
..-..+.+|+.. .......-.+....|.+- ....+.+.||+++
T Consensus 94 ----~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~ 136 (266)
T 2iwa_A 94 ----RTLSNIKNFTHQ-MKDGWGLATDGKILYGSD-GTSILYEIDPHTF 136 (266)
T ss_dssp ----TTTEEEEEEECC-SSSCCEEEECSSSEEEEC-SSSEEEEECTTTC
T ss_pred ----CCCcEEEEEECC-CCCeEEEEECCCEEEEEC-CCCeEEEEECCCC
Confidence 345667778765 222222111222334443 4678999999875
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=43.15 E-value=28 Score=30.02 Aligned_cols=110 Identities=10% Similarity=0.069 Sum_probs=47.4
Q ss_pred CccEEEEEEcCCCceEEcCCCCCceecCCCCeeeeCCcEEEEEeecCCCccEEEEEeCCCce-eeee-cCCCCCCcCCcc
Q 038993 161 GAAEVKVYSLARNSWKRIQDIPPCYIARDSPGVYASGSLHWIVMAEYGRHDFILALDLSDEA-YKEL-PLPPPVLLETGC 238 (327)
Q Consensus 161 ~~~~~~Vys~~~~~Wr~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~-~~~i-~lP~~~~~~~~~ 238 (327)
....+.||+..++.|+.+..+..+......-...-+|.+...+..+ ..|..+|+.+.. +... .+.... ...
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d----~~v~vwd~~~~~~~~~~~~~~~~~---~~v 103 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD----RNAYVYEKRPDGTWKQTLVLLRLN---RAA 103 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT----SSEEEC------CCCCEEECCCCS---SCE
T ss_pred CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC----CeEEEEEcCCCCceeeeeEecccC---Cce
Confidence 3556788888888887765443221100000111234433333333 258888888776 4332 222111 111
Q ss_pred eeeccEEEEeCCCcEEEEEecCCCcCCCeEEEEEEeeCCCCCCeEEEEEEc
Q 038993 239 RVRANYFGVLDNGCLCLVSNYGGGYRTPLSHVWVMTEYGVKDSWTKLFSIL 289 (327)
Q Consensus 239 ~~~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~ 289 (327)
. .+.-..+|.+.+....++ .+.||-++.. ..|.....+.
T Consensus 104 ~----~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~---~~~~~~~~~~ 142 (377)
T 3dwl_C 104 T----FVRWSPNEDKFAVGSGAR-----VISVCYFEQE---NDWWVSKHLK 142 (377)
T ss_dssp E----EEECCTTSSCCEEEESSS-----CEEECCC--------CCCCEEEC
T ss_pred E----EEEECCCCCEEEEEecCC-----eEEEEEECCc---ccceeeeEee
Confidence 1 333333466655555544 8999988762 3344444443
No 43
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=42.86 E-value=1.5e+02 Score=25.03 Aligned_cols=50 Identities=16% Similarity=0.033 Sum_probs=25.2
Q ss_pred EEEEEeCCCce----eeeecCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCcCCCeEEEEEEe
Q 038993 212 FILALDLSDEA----YKELPLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGYRTPLSHVWVMT 274 (327)
Q Consensus 212 ~il~fD~~~e~----~~~i~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~l~ 274 (327)
.|..+|+.+.. ...+.-|.. ... . .+.-..+|.+.+....++ .+.||-++
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~h~----~~v-~---~~~~~~~~~~l~~~~~d~-----~i~iwd~~ 176 (377)
T 3dwl_C 123 VISVCYFEQENDWWVSKHLKRPLR----STI-L---SLDWHPNNVLLAAGCADR-----KAYVLSAY 176 (377)
T ss_dssp CEEECCC-----CCCCEEECSSCC----SCE-E---EEEECTTSSEEEEEESSS-----CEEEEEEC
T ss_pred eEEEEEECCcccceeeeEeecccC----CCe-E---EEEEcCCCCEEEEEeCCC-----EEEEEEEE
Confidence 58888887764 233332211 111 1 344444577666665554 89999985
No 44
>2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A*
Probab=41.12 E-value=1.4e+02 Score=26.35 Aligned_cols=141 Identities=11% Similarity=0.026 Sum_probs=70.4
Q ss_pred EEEEEcC---CCceEEcCCCCCceecCCCCeeee-CCcEEEEEeecCC-CccEEEEEeCCCceeeeec----CCCCCCcC
Q 038993 165 VKVYSLA---RNSWKRIQDIPPCYIARDSPGVYA-SGSLHWIVMAEYG-RHDFILALDLSDEAYKELP----LPPPVLLE 235 (327)
Q Consensus 165 ~~Vys~~---~~~Wr~~~~~p~~~~~~~~~~v~~-~G~lywl~~~~~~-~~~~il~fD~~~e~~~~i~----lP~~~~~~ 235 (327)
.-+||.. ..+|+....++.. ....-+-+ +|.|+.+...... ....-.+-| ++|+... +|...
T Consensus 205 ~~~~S~D~~~G~tW~~~~~~~~~---~e~~vve~~dG~L~~~~r~~~g~~r~v~~S~D---~tWt~~~~~~~l~~~~--- 275 (386)
T 2xzi_A 205 RNIIGRGAPGNRTWSVQRLSGAG---AEGTIVQTPDGKLYRNDRPSQKGYRMVARGTL---EGFGAFAPDAGLPDPA--- 275 (386)
T ss_dssp EEEEEESSTTSCEEEEEECTTCC---SSEEEEECTTSCEEEEECCSSSEEEEEEEEET---TEECCCEEEEEEEECS---
T ss_pred EEEEccCCCCCCcccccCcCCCC---CcCEEEEeCCCcEEEEEeCCCCccEEEEEEeC---CccCcccccCCCCCCC---
Confidence 4556665 3689876544421 11112222 7999887655421 122334455 8897653 33211
Q ss_pred CcceeeccEEEEe--CCCcEEEEEecCCCcCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCCcccCCCcccccccCCC
Q 038993 236 TGCRVRANYFGVL--DNGCLCLVSNYGGGYRTPLSHVWVMTEYGVKDSWTKLFSILEEQVISPSPEFYDYSLPFESLEPP 313 (327)
Q Consensus 236 ~~~~~~~~~l~~~--~~g~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (327)
+.. .+... +++.+.++...........+.+|+-.|. +...|...+.+....+... ....+++-. ....++
T Consensus 276 --~~~---~~i~~~~~~~~~ll~~~p~~~~~R~~l~l~~S~D~-~G~tW~~~~~~~~g~~~~~-~~~~~ys~l-~~~~dg 347 (386)
T 2xzi_A 276 --CQG---SVLRYNSDAPARTIFLNSASGTSRRAMRVRISYDA-DAKKFNYGRKLEDAKVSGA-GHEGGYSSM-TKTGDY 347 (386)
T ss_dssp --CCC---EEEEEESSSSCEEEEEEECSSSCSCCEEEEEECST-TCCCCCCCEEGGGGCCSSS-CEEEEEEEE-EECTTS
T ss_pred --Ccc---EEEEecCCCCCEEEEECCCCCCCCcceEEEEEcCC-CCCccCCceEEecCCcccc-CCceEecee-EECCCC
Confidence 111 22222 3244444443221111237889986664 1368999888766543321 122233321 124568
Q ss_pred ceEEEEecC
Q 038993 314 SLLRGWHPT 322 (327)
Q Consensus 314 ~~~~~~~~~ 322 (327)
.++++|.-.
T Consensus 348 ~l~~lye~~ 356 (386)
T 2xzi_A 348 KIGALVESD 356 (386)
T ss_dssp CEEEEEEEE
T ss_pred EEEEEEECC
Confidence 888888654
No 45
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=38.75 E-value=1.8e+02 Score=24.59 Aligned_cols=79 Identities=15% Similarity=0.073 Sum_probs=44.2
Q ss_pred eCCc-EEEEEeecCCCccEEEEEeCCCceeeee----cCCCCCCcCCcceeeccEEEEeCCCcEEEEEecC-CCcCCCeE
Q 038993 195 ASGS-LHWIVMAEYGRHDFILALDLSDEAYKEL----PLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYG-GGYRTPLS 268 (327)
Q Consensus 195 ~~G~-lywl~~~~~~~~~~il~fD~~~e~~~~i----~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~-~~~~~~~l 268 (327)
-+|. +|...... ..|..||+.+.++..+ ..|... . ... .+....||+..++.... .. .+
T Consensus 220 pdg~~l~v~~~~~----~~v~v~~~~~g~~~~~~~~~~~~~~~---~-~~~---~i~~spdg~~l~v~~~~~~~----~i 284 (361)
T 3scy_A 220 SDGKFAYLINEIG----GTVIAFRYADGMLDEIQTVAADTVNA---Q-GSG---DIHLSPDGKYLYASNRLKAD----GV 284 (361)
T ss_dssp TTSSEEEEEETTT----CEEEEEEEETTEEEEEEEEESCSSCC---C-CEE---EEEECTTSSEEEEEECSSSC----EE
T ss_pred CCCCEEEEEcCCC----CeEEEEEecCCceEEeEEEecCCCCC---C-Ccc---cEEECCCCCEEEEECCCCCC----EE
Confidence 3676 44433223 2688888877766544 223221 1 112 45555568865555544 33 89
Q ss_pred EEEEEeeCCCCCCeEEEEEEcC
Q 038993 269 HVWVMTEYGVKDSWTKLFSILE 290 (327)
Q Consensus 269 ~iW~l~~~~~~~~W~~~~~i~~ 290 (327)
.||.++.. ...+..+..+..
T Consensus 285 ~v~~~~~~--~g~~~~~~~~~~ 304 (361)
T 3scy_A 285 AIFKVDET--NGTLTKVGYQLT 304 (361)
T ss_dssp EEEEECTT--TCCEEEEEEEEC
T ss_pred EEEEEcCC--CCcEEEeeEecC
Confidence 99999732 245767666655
No 46
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=38.61 E-value=1.5e+02 Score=23.83 Aligned_cols=134 Identities=10% Similarity=0.061 Sum_probs=68.1
Q ss_pred EEeccCCcEEeeecCCCCEEEEEcCCccccceeeccccCCCC--CCCceEEEE---EEEEEEEeCCCCCCCccEEEEEEc
Q 038993 96 VVGCCNGLLCIATNRLPQTLAIWTHLRESTAFYRRQRLPWIP--KRLVAFFMG---LVRIARRSGDACFGGAAEVKVYSL 170 (327)
Q Consensus 96 ~~~sc~GLlcl~~~~~~~~~~V~N~~~P~T~~~~~~~LP~~~--~~~~~~gfg---vv~v~~~~~~~~~~~~~~~~Vys~ 170 (327)
+....+|-+.+... ....++++| | +++.. .+..+. .....+.++ -+.+.. .....+.+|+.
T Consensus 104 i~~~~~g~l~v~~~-~~~~i~~~d---~-~g~~~--~~~~~~~~~~~~~i~~~~~g~l~v~~-------~~~~~i~~~~~ 169 (299)
T 2z2n_A 104 ITEGPNGDIWFTEM-NGNRIGRIT---D-DGKIR--EYELPNKGSYPSFITLGSDNALWFTE-------NQNNAIGRITE 169 (299)
T ss_dssp EEECTTSCEEEEET-TTTEEEEEC---T-TCCEE--EEECSSTTCCEEEEEECTTSCEEEEE-------TTTTEEEEECT
T ss_pred eEECCCCCEEEEec-CCceEEEEC---C-CCCEE--EecCCCCCCCCceEEEcCCCCEEEEe-------CCCCEEEEEcC
Confidence 44445777766652 357899999 9 77766 443221 110111111 111111 22346677777
Q ss_pred CCCceEEcCCCCCceecCCCCeeee--CCcEEEEEeecCCCccEEEEEeCCCceeeeecCCCCCCcCCcceeeccEEEEe
Q 038993 171 ARNSWKRIQDIPPCYIARDSPGVYA--SGSLHWIVMAEYGRHDFILALDLSDEAYKELPLPPPVLLETGCRVRANYFGVL 248 (327)
Q Consensus 171 ~~~~Wr~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~~~l~~~ 248 (327)
++...... .+... ....++.+ +|.+|+..... ..|..||. +..+..+.+|... . .-. .+..-
T Consensus 170 -~g~~~~~~-~~~~~--~~~~~i~~~~~g~l~v~~~~~----~~i~~~~~-~g~~~~~~~~~~~---~-~~~---~i~~~ 233 (299)
T 2z2n_A 170 -SGDITEFK-IPTPA--SGPVGITKGNDDALWFVEIIG----NKIGRITT-SGEITEFKIPTPN---A-RPH---AITAG 233 (299)
T ss_dssp -TCCEEEEE-CSSTT--CCEEEEEECTTSSEEEEETTT----TEEEEECT-TCCEEEEECSSTT---C-CEE---EEEEC
T ss_pred -CCcEEEee-CCCCC--CcceeEEECCCCCEEEEccCC----ceEEEECC-CCcEEEEECCCCC---C-Cce---eEEEC
Confidence 66655431 11100 01113333 58876654333 26999999 7777777666322 1 111 45554
Q ss_pred CCCcEEEEEec
Q 038993 249 DNGCLCLVSNY 259 (327)
Q Consensus 249 ~~g~L~~~~~~ 259 (327)
.+|.|++....
T Consensus 234 ~~g~l~v~~~~ 244 (299)
T 2z2n_A 234 AGIDLWFTEWG 244 (299)
T ss_dssp STTCEEEEETT
T ss_pred CCCCEEEeccC
Confidence 45888776643
No 47
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=34.83 E-value=2.1e+02 Score=24.16 Aligned_cols=120 Identities=8% Similarity=-0.010 Sum_probs=63.0
Q ss_pred CCEEEEEcCCccccceeeccccCCC--CCC--C--ceEEEE---EEEEEEEeCCCCCCCccEEEEEEcCCCce-EEcCCC
Q 038993 112 PQTLAIWTHLRESTAFYRRQRLPWI--PKR--L--VAFFMG---LVRIARRSGDACFGGAAEVKVYSLARNSW-KRIQDI 181 (327)
Q Consensus 112 ~~~~~V~N~~~P~T~~~~~~~LP~~--~~~--~--~~~gfg---vv~v~~~~~~~~~~~~~~~~Vys~~~~~W-r~~~~~ 181 (327)
...+.++| |.|++... .++.. ... . ..+.+. ++.. . .....+.|++..++.- +.+...
T Consensus 16 ~~~l~~~d---~~t~~~~~-~i~~~~n~~~lg~~~~~i~~~~~~lyv~-~-------~~~~~v~viD~~t~~~~~~i~~~ 83 (328)
T 3dsm_A 16 NATLSYYD---PATCEVEN-EVFYRANGFKLGDVAQSMVIRDGIGWIV-V-------NNSHVIFAIDINTFKEVGRITGF 83 (328)
T ss_dssp CBEEEEEE---TTTTEEEC-SHHHHHHSSCCBSCEEEEEEETTEEEEE-E-------GGGTEEEEEETTTCCEEEEEECC
T ss_pred CceEEEEE---CCCCEEhh-hhHhhhcCcccCccceEEEEECCEEEEE-E-------cCCCEEEEEECcccEEEEEcCCC
Confidence 57899999 99998772 22110 000 0 011111 2222 1 2356788999988765 333211
Q ss_pred CCceecCCCCee--eeCCcEEEEEeecCCCccEEEEEeCCCceee-eecCCCCCCcCCcceeeccEEEEeCCCcEEEEEe
Q 038993 182 PPCYIARDSPGV--YASGSLHWIVMAEYGRHDFILALDLSDEAYK-ELPLPPPVLLETGCRVRANYFGVLDNGCLCLVSN 258 (327)
Q Consensus 182 p~~~~~~~~~~v--~~~G~lywl~~~~~~~~~~il~fD~~~e~~~-~i~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~ 258 (327)
.. ..++ .-+|.+|...... ..|..+|+.+.+.. .++++.... ...... .+..-+ |+|++...
T Consensus 84 ~~------p~~i~~~~~g~lyv~~~~~----~~v~~iD~~t~~~~~~i~~g~~~~-~~~~p~---~i~~~~-~~lyv~~~ 148 (328)
T 3dsm_A 84 TS------PRYIHFLSDEKAYVTQIWD----YRIFIINPKTYEITGYIECPDMDM-ESGSTE---QMVQYG-KYVYVNCW 148 (328)
T ss_dssp SS------EEEEEEEETTEEEEEEBSC----SEEEEEETTTTEEEEEEECTTCCT-TTCBCC---CEEEET-TEEEEEEC
T ss_pred CC------CcEEEEeCCCeEEEEECCC----CeEEEEECCCCeEEEEEEcCCccc-cCCCcc---eEEEEC-CEEEEEcC
Confidence 11 1122 2578888776333 27999999987764 456554110 000011 334444 88888754
No 48
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=34.25 E-value=20 Score=21.29 Aligned_cols=16 Identities=38% Similarity=0.532 Sum_probs=11.3
Q ss_pred CCCcHHHHHHHHhcCC
Q 038993 5 DPLPLHIIDDILSRLH 20 (327)
Q Consensus 5 ~~LP~Dll~eIL~rLP 20 (327)
..||.||-.|||+--.
T Consensus 22 ~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 22 KQLPADIQEEILSGKS 37 (48)
T ss_dssp TTSCHHHHHHHTTCCC
T ss_pred HHCcHHHHHHHHhcch
Confidence 4678888888877544
No 49
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=33.47 E-value=2.2e+02 Score=24.13 Aligned_cols=188 Identities=10% Similarity=0.011 Sum_probs=85.2
Q ss_pred eccCCc-EEeeecCCCCEEEEEcCCccccceeeccccCCCCCCCceEEEE----EEEEEEEeCCCCCCCccEEEEEEcCC
Q 038993 98 GCCNGL-LCIATNRLPQTLAIWTHLRESTAFYRRQRLPWIPKRLVAFFMG----LVRIARRSGDACFGGAAEVKVYSLAR 172 (327)
Q Consensus 98 ~sc~GL-lcl~~~~~~~~~~V~N~~~P~T~~~~~~~LP~~~~~~~~~gfg----vv~v~~~~~~~~~~~~~~~~Vys~~~ 172 (327)
-+-+|- +.+... ....+.+|| +.+++.. ..-........+.|. .+.+.. .....+.+++..+
T Consensus 81 ~spdg~~l~~~~~-~~~~v~v~d---~~~~~~~--~~~~~~~~~~~~~~s~dg~~l~~~~-------~~~~~v~~~d~~~ 147 (391)
T 1l0q_A 81 VSPDGKQVYVTNM-ASSTLSVID---TTSNTVA--GTVKTGKSPLGLALSPDGKKLYVTN-------NGDKTVSVINTVT 147 (391)
T ss_dssp ECTTSSEEEEEET-TTTEEEEEE---TTTTEEE--EEEECSSSEEEEEECTTSSEEEEEE-------TTTTEEEEEETTT
T ss_pred ECCCCCEEEEEEC-CCCEEEEEE---CCCCeEE--EEEeCCCCcceEEECCCCCEEEEEe-------CCCCEEEEEECCC
Confidence 344454 333432 457899999 9988776 432221111112221 111221 2356888898888
Q ss_pred CceEEcCCCCCceecCCCCeeeeCCcEEEEEeecCCCccEEEEEeCCCceeeee-cCCCCCCcCCcceeeccEEEEeCCC
Q 038993 173 NSWKRIQDIPPCYIARDSPGVYASGSLHWIVMAEYGRHDFILALDLSDEAYKEL-PLPPPVLLETGCRVRANYFGVLDNG 251 (327)
Q Consensus 173 ~~Wr~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i-~lP~~~~~~~~~~~~~~~l~~~~~g 251 (327)
+.....-...... ..-...-+|..-+++... ...|..+|+.+.+.... .... .-. .+....+|
T Consensus 148 ~~~~~~~~~~~~~---~~~~~~~dg~~l~~~~~~---~~~v~~~d~~~~~~~~~~~~~~-------~~~---~~~~~~~g 211 (391)
T 1l0q_A 148 KAVINTVSVGRSP---KGIAVTPDGTKVYVANFD---SMSISVIDTVTNSVIDTVKVEA-------APS---GIAVNPEG 211 (391)
T ss_dssp TEEEEEEECCSSE---EEEEECTTSSEEEEEETT---TTEEEEEETTTTEEEEEEECSS-------EEE---EEEECTTS
T ss_pred CcEEEEEecCCCc---ceEEECCCCCEEEEEeCC---CCEEEEEECCCCeEEEEEecCC-------Ccc---ceEECCCC
Confidence 7654331111111 000122245544443322 13689999988765332 2211 111 33334446
Q ss_pred cEEEEEecCCCcCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCCcccC-CCcccccccCCCceEEEEecCC
Q 038993 252 CLCLVSNYGGGYRTPLSHVWVMTEYGVKDSWTKLFSILEEQVISPSPEFY-DYSLPFESLEPPSLLRGWHPTS 323 (327)
Q Consensus 252 ~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 323 (327)
+..++..... ....+.+|-++. ...+..+....-.. .-.|. +....+.+......+.+||..+
T Consensus 212 ~~l~~~~~~~--~~~~v~~~d~~~------~~~~~~~~~~~~~~-~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 212 TKAYVTNVDK--YFNTVSMIDTGT------NKITARIPVGPDPA-GIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp SEEEEEEECS--SCCEEEEEETTT------TEEEEEEECCSSEE-EEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred CEEEEEecCc--CCCcEEEEECCC------CeEEEEEecCCCcc-EEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 6555444310 012888886653 12333443322110 01222 2222233445556777887664
No 50
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=31.26 E-value=2.1e+02 Score=24.27 Aligned_cols=64 Identities=16% Similarity=0.216 Sum_probs=34.5
Q ss_pred eeee--CCcEEEEEeecC-CCccEEEEEeCCCce-eeeecCCCCCCcCCcceeeccEEEEe-CCCcEEEEEe
Q 038993 192 GVYA--SGSLHWIVMAEY-GRHDFILALDLSDEA-YKELPLPPPVLLETGCRVRANYFGVL-DNGCLCLVSN 258 (327)
Q Consensus 192 ~v~~--~G~lywl~~~~~-~~~~~il~fD~~~e~-~~~i~lP~~~~~~~~~~~~~~~l~~~-~~g~L~~~~~ 258 (327)
++.+ +|.|||+..... .....|+.||+.+.+ .+.+.+|.........-. .+.+- ++|.+++...
T Consensus 71 gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~---~v~vd~~~g~~yvtd~ 139 (343)
T 2qe8_A 71 GIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVN---DLAVDLIHNFVYISDP 139 (343)
T ss_dssp EEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCC---EEEEETTTTEEEEEEC
T ss_pred EEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccc---eEEEecCCCEEEEEcC
Confidence 4444 588998864310 001369999999877 566777743311111111 44544 3366666544
No 51
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=30.67 E-value=2.2e+02 Score=23.12 Aligned_cols=25 Identities=16% Similarity=0.373 Sum_probs=19.2
Q ss_pred ccCCcEEeeecCCCCEEEEEcCCccccceee
Q 038993 99 CCNGLLCIATNRLPQTLAIWTHLRESTAFYR 129 (327)
Q Consensus 99 sc~GLlcl~~~~~~~~~~V~N~~~P~T~~~~ 129 (327)
|.+|+|.... ++.+.||| ..|++..
T Consensus 34 S~~~~lAvg~---D~tV~iWd---~~tg~~~ 58 (318)
T 4ggc_A 34 SSGNVLAVAL---DNSVYLWS---ASSGDIL 58 (318)
T ss_dssp CTTSEEEEEE---TTEEEEEE---TTTCCEE
T ss_pred CCCCEEEEEe---CCEEEEEE---CCCCCEE
Confidence 5677665443 67899999 9998876
No 52
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=28.48 E-value=4.1e+02 Score=25.66 Aligned_cols=114 Identities=16% Similarity=0.259 Sum_probs=57.8
Q ss_pred ccEEEEEEcCC--CceEEcCCCCCc-------eecCCCCeee--eCCcEEEEEeecCCCccEEEEEeCCCceeeeecC--
Q 038993 162 AAEVKVYSLAR--NSWKRIQDIPPC-------YIARDSPGVY--ASGSLHWIVMAEYGRHDFILALDLSDEAYKELPL-- 228 (327)
Q Consensus 162 ~~~~~Vys~~~--~~Wr~~~~~p~~-------~~~~~~~~v~--~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~l-- 228 (327)
...+.++.|.. .+|.....++.. .......++. -+|.++....... ....+.+-| ...+|+....
T Consensus 445 ~~~~~v~rS~DgG~TWs~p~~l~~~~~~~~~~~~~~pg~GI~~~~~GrLv~p~~~~~-~s~v~~S~D-gG~TW~~~~~~~ 522 (686)
T 2jkb_A 445 TNYIAMTTSQNRGESWEQFKLLPPFLGEKHNGTYLCPGQGLALKSSNRLIFATYTSG-ELTYLISDD-SGQTWKKSSASI 522 (686)
T ss_dssp SCEEEEEEESSTTSCCCCCEECCCSSCTTSCCCEECSEECEECTTSSCEEEEEEETT-EEEEEEESS-TTSSCEEEEEEC
T ss_pred ccEEEEEEECCCCCcCCCCeecccccCcccceeeeCCCcceEEccCCeEEEEEecCC-cEEEEEECC-CCCeeEeCcccC
Confidence 44566666665 379764333211 0111112333 2688876544321 011222222 4578988743
Q ss_pred CCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCcCCCeEEEEEEeeCCCCCCeEEEEEEc
Q 038993 229 PPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGYRTPLSHVWVMTEYGVKDSWTKLFSIL 289 (327)
Q Consensus 229 P~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~ 289 (327)
|... ..... .++++.||+|.++...... ...+..-.|.| ..|++.....
T Consensus 523 p~~~---~~~e~---~ivel~dG~L~~~~R~~~G----~~~v~~S~DgG--~TWs~~~~~~ 571 (686)
T 2jkb_A 523 PFKN---ATAEA---QMVELRDGVIRTFFRTTTG----KIAYMTSRDSG--ETWSKVSYID 571 (686)
T ss_dssp SCSS---CCCCE---EEEEEETTEEEEEECCSSS----SCEEEEESSTT--SSCCCCEECS
T ss_pred CCCC---Cceee---EEEEecCCEEEEEEEcCCC----cEeEEEeCCCC--CCCccccccc
Confidence 4221 11233 6777777999887654332 34455555544 6899877653
No 53
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=28.11 E-value=1.2e+02 Score=25.27 Aligned_cols=31 Identities=13% Similarity=0.156 Sum_probs=22.6
Q ss_pred CCcEEEEEeecCCCccEEEEEeCCCceeeeecCCC
Q 038993 196 SGSLHWIVMAEYGRHDFILALDLSDEAYKELPLPP 230 (327)
Q Consensus 196 ~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~lP~ 230 (327)
+|.+||...... .|..+|+.+.....+..|.
T Consensus 24 ~~~l~~~d~~~~----~i~~~d~~~~~~~~~~~~~ 54 (297)
T 3g4e_A 24 SNSLLFVDIPAK----KVCRWDSFTKQVQRVTMDA 54 (297)
T ss_dssp TTEEEEEETTTT----EEEEEETTTCCEEEEECSS
T ss_pred CCEEEEEECCCC----EEEEEECCCCcEEEEeCCC
Confidence 478999876543 7899999887776665553
No 54
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=28.05 E-value=2.5e+02 Score=23.00 Aligned_cols=141 Identities=15% Similarity=0.061 Sum_probs=0.0
Q ss_pred EEEEEEc-CCCceEEcCCCCCceecCCCCeeeeCCc-EEEEEeecCCCccEEEEEeCC--Cceeeee---cCCCCCCcCC
Q 038993 164 EVKVYSL-ARNSWKRIQDIPPCYIARDSPGVYASGS-LHWIVMAEYGRHDFILALDLS--DEAYKEL---PLPPPVLLET 236 (327)
Q Consensus 164 ~~~Vys~-~~~~Wr~~~~~p~~~~~~~~~~v~~~G~-lywl~~~~~~~~~~il~fD~~--~e~~~~i---~lP~~~~~~~ 236 (327)
.+.+|+. .++..+.+...+.......- ...-+|. +|....... .|..||+. +.+++.+ +.+....
T Consensus 16 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~spdg~~l~~~~~~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~--- 87 (343)
T 1ri6_A 16 QIHVWNLNHEGALTLTQVVDVPGQVQPM-VVSPDKRYLYVGVRPEF----RVLAYRIAPDDGALTFAAESALPGSLT--- 87 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSCCCCE-EECTTSSEEEEEETTTT----EEEEEEECTTTCCEEEEEEEECSSCCS---
T ss_pred eEEEEEECCCCcEEEeeeEecCCCCceE-EECCCCCEEEEeecCCC----eEEEEEecCCCCceeeccccccCCCCc---
Q ss_pred cceeeccEEEEeCCCcEEEEEecCCCcCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCCcccCCCcccccccCCCceE
Q 038993 237 GCRVRANYFGVLDNGCLCLVSNYGGGYRTPLSHVWVMTEYGVKDSWTKLFSILEEQVISPSPEFYDYSLPFESLEPPSLL 316 (327)
Q Consensus 237 ~~~~~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (327)
.+....||+..++...... .+.+|-++ .+ ........+...........-.+....+.+......+
T Consensus 88 -------~~~~s~dg~~l~~~~~~~~----~i~~~d~~-~~--~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v 153 (343)
T 1ri6_A 88 -------HISTDHQGQFVFVGSYNAG----NVSVTRLE-DG--LPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRI 153 (343)
T ss_dssp -------EEEECTTSSEEEEEETTTT----EEEEEEEE-TT--EEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEE
T ss_pred -------EEEEcCCCCEEEEEecCCC----eEEEEECC-CC--ccccccccccCCCCceEEEECCCCCEEEEecCCCCEE
Q ss_pred EEEecCCCCC
Q 038993 317 RGWHPTSFGA 326 (327)
Q Consensus 317 ~~~~~~~~~~ 326 (327)
.+|+..+.|+
T Consensus 154 ~~~d~~~~~~ 163 (343)
T 1ri6_A 154 CLFTVSDDGH 163 (343)
T ss_dssp EEEEECTTSC
T ss_pred EEEEecCCCc
No 55
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=27.27 E-value=2.7e+02 Score=23.16 Aligned_cols=55 Identities=15% Similarity=0.185 Sum_probs=29.3
Q ss_pred CCCEEEEEcCCccccce---eeccccCCCCCCCceEEEE----EEEEEEEeCCCCCCCccEEEEEEcCCCceEEc
Q 038993 111 LPQTLAIWTHLRESTAF---YRRQRLPWIPKRLVAFFMG----LVRIARRSGDACFGGAAEVKVYSLARNSWKRI 178 (327)
Q Consensus 111 ~~~~~~V~N~~~P~T~~---~~~~~LP~~~~~~~~~gfg----vv~v~~~~~~~~~~~~~~~~Vys~~~~~Wr~~ 178 (327)
.++.+.||| ..+++ .. .++........+.|. .+... .....+.+|+..++.+...
T Consensus 28 ~d~~v~i~~---~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~~~--------~~dg~i~vwd~~~~~~~~~ 89 (372)
T 1k8k_C 28 NNHEVHIYE---KSGNKWVQVH--ELKEHNGQVTGVDWAPDSNRIVTC--------GTDRNAYVWTLKGRTWKPT 89 (372)
T ss_dssp SSSEEEEEE---EETTEEEEEE--EEECCSSCEEEEEEETTTTEEEEE--------ETTSCEEEEEEETTEEEEE
T ss_pred CCCEEEEEe---CCCCcEEeee--eecCCCCcccEEEEeCCCCEEEEE--------cCCCeEEEEECCCCeeeee
Confidence 467889999 88875 33 343322221122222 11111 2345688888888876544
No 56
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=26.97 E-value=2.7e+02 Score=23.13 Aligned_cols=54 Identities=22% Similarity=0.295 Sum_probs=32.6
Q ss_pred cEEEEEeCCCceeeeecCCCCCCcCCcceeeccEEEEeCCCcEEEEEecCCCcCCCeEEEEEEee
Q 038993 211 DFILALDLSDEAYKELPLPPPVLLETGCRVRANYFGVLDNGCLCLVSNYGGGYRTPLSHVWVMTE 275 (327)
Q Consensus 211 ~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~l~~ 275 (327)
..|..||...+....+..|....... .. .+..-+ |.|++...... .+.+..++.
T Consensus 260 ~~v~~~d~~G~~~~~~~~~~g~~~~~-~~----~~~~~~-g~L~v~~~~~~-----~i~~~~~~~ 313 (322)
T 2fp8_A 260 PKGIKFDEFGNILEVIPLPPPFAGEH-FE----QIQEHD-GLLYIGTLFHG-----SVGILVYDK 313 (322)
T ss_dssp EEEEEECTTSCEEEEEECCTTTTTSC-CC----EEEEET-TEEEEECSSCS-----EEEEEEC--
T ss_pred cEEEEECCCCCEEEEEECCCCCcccc-ce----EEEEeC-CEEEEeecCCC-----ceEEEeccc
Confidence 36999999888888888876431011 11 333344 89988765443 666666654
No 57
>1rmk_A MU-O-conotoxin mrvib; beta sheet, cystine knot; NMR {Conus marmoreus} SCOP: g.3.6.1
Probab=25.52 E-value=11 Score=19.92 Aligned_cols=12 Identities=50% Similarity=1.173 Sum_probs=9.6
Q ss_pred EEeccCCcEEee
Q 038993 96 VVGCCNGLLCIA 107 (327)
Q Consensus 96 ~~~sc~GLlcl~ 107 (327)
++-+|.||+|+.
T Consensus 16 ~i~CC~GLIC~~ 27 (31)
T 1rmk_A 16 FVYCCPGLICGP 27 (31)
T ss_dssp CCEESTTCCBCS
T ss_pred EEEecCCceEee
Confidence 677899999853
No 58
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=22.84 E-value=3.3e+02 Score=22.68 Aligned_cols=149 Identities=7% Similarity=0.001 Sum_probs=74.2
Q ss_pred CCcEEeeecCCCCEEEEEcCCccccceeeccccCCCCC------C----CceEEEE----EEEEEEEeCCCCCCCccEEE
Q 038993 101 NGLLCIATNRLPQTLAIWTHLRESTAFYRRQRLPWIPK------R----LVAFFMG----LVRIARRSGDACFGGAAEVK 166 (327)
Q Consensus 101 ~GLlcl~~~~~~~~~~V~N~~~P~T~~~~~~~LP~~~~------~----~~~~gfg----vv~v~~~~~~~~~~~~~~~~ 166 (327)
+|-+.+++.....++.+++ +-.+... .+..... . ...+.++ -+.+.. .....+.
T Consensus 154 ~g~lyv~d~~~~~~I~~~~---~~g~~~~--~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d-------~~~~~I~ 221 (329)
T 3fvz_A 154 TGAVFVSDGYCNSRIVQFS---PSGKFVT--QWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVAD-------RENGRIQ 221 (329)
T ss_dssp TCCEEEEECSSCCEEEEEC---TTSCEEE--EECEECCSSSCCTTEESCEEEEEEETTTTEEEEEE-------TTTTEEE
T ss_pred CCeEEEEeCCCCCeEEEEc---CCCCEEE--EeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEE-------CCCCEEE
Confidence 7887777632367888888 7655444 4432110 0 0112222 222221 3456889
Q ss_pred EEEcCCCceEEcCCCC------CceecCCCCeeeeCCcEEEEEeecCCCccEEEEEeCCCceeeeecCCCCCCcCCccee
Q 038993 167 VYSLARNSWKRIQDIP------PCYIARDSPGVYASGSLHWIVMAEYGRHDFILALDLSDEAYKELPLPPPVLLETGCRV 240 (327)
Q Consensus 167 Vys~~~~~Wr~~~~~p------~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~ 240 (327)
+|+..++.....-..+ ..........+..+|.+|.... ....|..+|..+.+....--+... ......
T Consensus 222 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~----~~~~v~~~~~~~g~~~~~~~~~~~--~~~~p~ 295 (329)
T 3fvz_A 222 CFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQ----EPVQGFVMNFSSGEIIDVFKPVRK--HFDMPH 295 (329)
T ss_dssp EEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCS----CCCCEEEEETTTCCEEEEECCSSS--CCSSEE
T ss_pred EEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccC----CCcEEEEEEcCCCeEEEEEcCCCC--ccCCee
Confidence 9998876654321111 1110111111222344333221 224689999887766544222111 111122
Q ss_pred eccEEEEeCCCcEEEEEecCCCcCCCeEEEEEEee
Q 038993 241 RANYFGVLDNGCLCLVSNYGGGYRTPLSHVWVMTE 275 (327)
Q Consensus 241 ~~~~l~~~~~g~L~~~~~~~~~~~~~~l~iW~l~~ 275 (327)
.+....||.|++.....+ .+.+|.++.
T Consensus 296 ---~ia~~~dG~lyvad~~~~-----~I~~~~~~~ 322 (329)
T 3fvz_A 296 ---DIVASEDGTVYIGDAHTN-----TVWKFTLTE 322 (329)
T ss_dssp ---EEEECTTSEEEEEESSSC-----CEEEEEEEE
T ss_pred ---EEEECCCCCEEEEECCCC-----EEEEEeCCc
Confidence 566656688888776544 888888876
No 59
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=22.53 E-value=3.5e+02 Score=22.88 Aligned_cols=110 Identities=15% Similarity=0.076 Sum_probs=57.8
Q ss_pred EEeccCCcEEeeecCCCCEEEEEcCCccccceeec-cccCCCCCCCceEEEEEEEEEEEeCCCCCCCccEEEEEEcCCCc
Q 038993 96 VVGCCNGLLCIATNRLPQTLAIWTHLRESTAFYRR-QRLPWIPKRLVAFFMGLVRIARRSGDACFGGAAEVKVYSLARNS 174 (327)
Q Consensus 96 ~~~sc~GLlcl~~~~~~~~~~V~N~~~P~T~~~~~-~~LP~~~~~~~~~gfgvv~v~~~~~~~~~~~~~~~~Vys~~~~~ 174 (327)
.....+|.+.+.. ....++.+| +.|++.+- ..++..........=+.+.+. .....+..|+..++.
T Consensus 98 ~~~~~~~~v~v~~--~~g~l~a~d---~~tG~~~W~~~~~~~~~~~p~~~~~~v~v~--------~~~g~l~~~d~~tG~ 164 (376)
T 3q7m_A 98 GVTVSGGHVYIGS--EKAQVYALN---TSDGTVAWQTKVAGEALSRPVVSDGLVLIH--------TSNGQLQALNEADGA 164 (376)
T ss_dssp EEEEETTEEEEEE--TTSEEEEEE---TTTCCEEEEEECSSCCCSCCEEETTEEEEE--------CTTSEEEEEETTTCC
T ss_pred CceEeCCEEEEEc--CCCEEEEEE---CCCCCEEEEEeCCCceEcCCEEECCEEEEE--------cCCCeEEEEECCCCc
Confidence 3445678877766 467899999 99887540 012211110001110122221 234578888887764
Q ss_pred --eEEcCCCCCceecCCCCeeeeCCcEEEEEeecCCCccEEEEEeCCCcee
Q 038993 175 --WKRIQDIPPCYIARDSPGVYASGSLHWIVMAEYGRHDFILALDLSDEAY 223 (327)
Q Consensus 175 --Wr~~~~~p~~~~~~~~~~v~~~G~lywl~~~~~~~~~~il~fD~~~e~~ 223 (327)
|+.-...+.........++..+|.+|.-.... .|.++|..+.+.
T Consensus 165 ~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g-----~l~~~d~~tG~~ 210 (376)
T 3q7m_A 165 VKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNG-----RVSAVLMEQGQM 210 (376)
T ss_dssp EEEEEECCC-----CCCCCCEEETTEEEECCTTT-----EEEEEETTTCCE
T ss_pred EEEEEeCCCCceeecCCCCcEEECCEEEEEcCCC-----EEEEEECCCCcE
Confidence 87654322211111234566678776643333 699999876543
No 60
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=22.32 E-value=1.7e+02 Score=24.65 Aligned_cols=30 Identities=23% Similarity=0.336 Sum_probs=21.2
Q ss_pred CcEEEEEeecCCCccEEEEEeCCCceeeeecCCC
Q 038993 197 GSLHWIVMAEYGRHDFILALDLSDEAYKELPLPP 230 (327)
Q Consensus 197 G~lywl~~~~~~~~~~il~fD~~~e~~~~i~lP~ 230 (327)
|.+||...... .|..+|..+...+.+..|.
T Consensus 61 ~~l~~~d~~~~----~i~~~d~~~~~~~~~~~~~ 90 (326)
T 2ghs_A 61 GTAWWFNILER----ELHELHLASGRKTVHALPF 90 (326)
T ss_dssp TEEEEEEGGGT----EEEEEETTTTEEEEEECSS
T ss_pred CEEEEEECCCC----EEEEEECCCCcEEEEECCC
Confidence 67888865543 6888888887776665553
No 61
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=21.62 E-value=1.8e+02 Score=25.95 Aligned_cols=23 Identities=22% Similarity=0.310 Sum_probs=18.0
Q ss_pred cEEEEEeCCCc---eeeeecCCCCCC
Q 038993 211 DFILALDLSDE---AYKELPLPPPVL 233 (327)
Q Consensus 211 ~~il~fD~~~e---~~~~i~lP~~~~ 233 (327)
..|++||+.++ ..+.+.+|....
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~ 148 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLV 148 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGC
T ss_pred ceEEEEECCCCCceeEEEEECCHHhc
Confidence 47999999987 557779987654
No 62
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=20.68 E-value=1.4e+02 Score=26.28 Aligned_cols=34 Identities=15% Similarity=0.425 Sum_probs=28.1
Q ss_pred CcEEEEEecCCCcCCCeEEEEEEeeCCCCCCeEEEEEEcCCC
Q 038993 251 GCLCLVSNYGGGYRTPLSHVWVMTEYGVKDSWTKLFSILEEQ 292 (327)
Q Consensus 251 g~L~~~~~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~ 292 (327)
..+|++...+. .+.+|...+ ...|.+.|+..+..
T Consensus 53 ~~~~~~~~~~~-----~v~lw~~~~---~~~~~~~~~~~~~~ 86 (356)
T 2w18_A 53 KEPCIITACED-----VVSLWKALD---AWQWEKLYTWHFAE 86 (356)
T ss_dssp CEEEEEEEESS-----EEEEEEESS---SSBEEEEEEEECCS
T ss_pred CccEEEEeccc-----eEEEcccCC---CccceeeEEEeccC
Confidence 46899998876 999999988 36799999987654
No 63
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=20.22 E-value=3.3e+02 Score=21.68 Aligned_cols=132 Identities=12% Similarity=0.082 Sum_probs=67.4
Q ss_pred EEeccCCcEEeeecCCCCEEEEEcCCccccceeecccc--CCCCCCCceEEEE---EEEEEEEeCCCCCCCccEEEEEEc
Q 038993 96 VVGCCNGLLCIATNRLPQTLAIWTHLRESTAFYRRQRL--PWIPKRLVAFFMG---LVRIARRSGDACFGGAAEVKVYSL 170 (327)
Q Consensus 96 ~~~sc~GLlcl~~~~~~~~~~V~N~~~P~T~~~~~~~L--P~~~~~~~~~gfg---vv~v~~~~~~~~~~~~~~~~Vys~ 170 (327)
+....+|-+.+... ....+++++ + +++.. .+ |........+.++ -+.+.. .....+.+|+.
T Consensus 146 i~~~~~g~l~v~~~-~~~~i~~~~---~-~g~~~--~~~~~~~~~~~~~i~~~~~g~l~v~~-------~~~~~i~~~~~ 211 (299)
T 2z2n_A 146 ITLGSDNALWFTEN-QNNAIGRIT---E-SGDIT--EFKIPTPASGPVGITKGNDDALWFVE-------IIGNKIGRITT 211 (299)
T ss_dssp EEECTTSCEEEEET-TTTEEEEEC---T-TCCEE--EEECSSTTCCEEEEEECTTSSEEEEE-------TTTTEEEEECT
T ss_pred EEEcCCCCEEEEeC-CCCEEEEEc---C-CCcEE--EeeCCCCCCcceeEEECCCCCEEEEc-------cCCceEEEECC
Confidence 33344666655542 356888899 8 87777 54 3211110112221 111211 22456777777
Q ss_pred CCCceEEcCCCCCceecCCCCeeee--CCcEEEEEeecCCCccEEEEEeCCCceeeeecCCCCCCcCCcceeeccEEEEe
Q 038993 171 ARNSWKRIQDIPPCYIARDSPGVYA--SGSLHWIVMAEYGRHDFILALDLSDEAYKELPLPPPVLLETGCRVRANYFGVL 248 (327)
Q Consensus 171 ~~~~Wr~~~~~p~~~~~~~~~~v~~--~G~lywl~~~~~~~~~~il~fD~~~e~~~~i~lP~~~~~~~~~~~~~~~l~~~ 248 (327)
++..+... .+... ....++.+ +|.+|...... ..|..||. +..+..+.+|... .. -. .+..
T Consensus 212 -~g~~~~~~-~~~~~--~~~~~i~~~~~g~l~v~~~~~----~~i~~~d~-~g~~~~~~~~~~~--~~--~~---~i~~- 274 (299)
T 2z2n_A 212 -SGEITEFK-IPTPN--ARPHAITAGAGIDLWFTEWGA----NKIGRLTS-NNIIEEYPIQIKS--AE--PH---GICF- 274 (299)
T ss_dssp -TCCEEEEE-CSSTT--CCEEEEEECSTTCEEEEETTT----TEEEEEET-TTEEEEEECSSSS--CC--EE---EEEE-
T ss_pred -CCcEEEEE-CCCCC--CCceeEEECCCCCEEEeccCC----ceEEEECC-CCceEEEeCCCCC--Cc--cc---eEEe-
Confidence 66665432 11100 11113333 67866554333 27999999 5677777776432 11 11 4455
Q ss_pred CCCcEEEEEe
Q 038993 249 DNGCLCLVSN 258 (327)
Q Consensus 249 ~~g~L~~~~~ 258 (327)
.+|.|++...
T Consensus 275 ~~g~l~v~~~ 284 (299)
T 2z2n_A 275 DGETIWFAME 284 (299)
T ss_dssp CSSCEEEEET
T ss_pred cCCCEEEEec
Confidence 5599988764
Done!