BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038998
(903 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3L4T|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Bj2661
pdb|3L4U|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With De-O-Sulfonated Kotalanol
pdb|3L4V|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Kotalanol
pdb|3L4W|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Miglitol
pdb|3L4X|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Nr4-8
pdb|3L4Y|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Nr4-8ii
pdb|3L4Z|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Salacinol
Length = 875
Score = 521 bits (1341), Expect = e-147, Method: Compositional matrix adjust.
Identities = 295/741 (39%), Positives = 428/741 (57%), Gaps = 55/741 (7%)
Query: 65 LTADLSLIKNSSVYGPDIYNLNLFASLETKDRLRVRLTDSNNQRWEIPQEIIPRQFHPTG 124
TA L + +S V+G ++ N+ L A +T +R +LTD N R+E+P E +
Sbjct: 65 FTARLKNLPSSPVFGSNVDNVLLTAEYQTSNRFHFKLTDQTNNRFEVPHEHV-------- 116
Query: 125 HNRSLPENHFLSDATSDLVFTLH-NTTPFGFSVSRRSSGETLFDTSPEGSNADTFLVFKD 183
F +A + L + + + PF V+RRS+ LFD+S L+F D
Sbjct: 117 -------QSFSGNAAASLTYQVEISRQPFSIKVTRRSNNRVLFDSSIGP------LLFAD 163
Query: 184 QYIQLSSALPKGSAHLYGLGEHTKKSLKLTPNSNDTLTLWNADLFAAYLDVNLYGSHPFY 243
Q++QLS+ LP S ++YGLGEH + + N T ++N D NLYG+ F+
Sbjct: 164 QFLQLSTRLP--STNVYGLGEHVHQQYRHDMNWK-TWPIFNRDTTPNGNGTNLYGAQTFF 220
Query: 244 IDVRSPNGTTHGVLLLNSNGMDVVYT-GDRITYKVIGGIIDLYFFAGPSPDSVIQQYTEF 302
+ + +G + GV L+NSN M+VV ITY+ IGGI+D Y F G +P+ V+Q+Y E
Sbjct: 221 LCLEDASGLSFGVFLMNSNAMEVVLQPAPAITYRTIGGILDFYVFLGNTPEQVVQEYLEL 280
Query: 303 IGRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLD 362
IGRPA YW+ GFH RY Y + ++ VV A +P +V DIDYMD +DFT D
Sbjct: 281 IGRPALPSYWALGFHLSRYEYGTLDNMREVVERNRAAQLPYDVQHADIDYMDERRDFTYD 340
Query: 363 PINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNS----YETYIRGIEADIFIKR-DGV 417
++F +FV+ LH NGQ+ V+I+DP IS N+S Y Y RG + I++ DGV
Sbjct: 341 SVDFKG--FPEFVNELHNNGQKLVIIVDPAISNNSSSSKPYGPYDRGSDMKIWVNSSDGV 398
Query: 418 -PYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMNEISNFITSPPTPF 476
P +G+VW G FPD+ NP +W E +LF + + DG+W+DMNE+SNF+ +
Sbjct: 399 TPLIGEVWPGQTVFPDYTNPNCAVWWTKEFELFHNQVEFDGIWIDMNEVSNFVDGSVSGC 458
Query: 477 ST--LDDPPYKINNNGTRRPINN----KTIPATAL-HYGNVTEYNVHSLYGLLEAKAT-R 528
ST L++PP+ T R ++ KT+ A+ H+G +Y++H+LYG A AT
Sbjct: 459 STNNLNNPPF------TPRILDGYLFCKTLCMDAVQHWGK--QYDIHNLYGYSMAVATAE 510
Query: 529 AALINAVGKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGA 588
AA KR F+LTRSTF SGK+ AHW GDN ATWDDL ++IP +L F LFGIPMVG
Sbjct: 511 AAKTVFPNKRSFILTRSTFAGSGKFAAHWLGDNTATWDDLRWSIPGVLEFNLFGIPMVGP 570
Query: 589 DICGFQRNTTEELCRRWIQLGAFYPFARDHSDKFKIRQELYLWDS---VAATARKVLGLR 645
DICGF +T EELCRRW+QLGAFYPF+R+H+ + Q+ + + + ++R L +R
Sbjct: 571 DICGFALDTPEELCRRWMQLGAFYPFSRNHNGQGYKDQDPASFGADSLLLNSSRHYLNIR 630
Query: 646 YRLLPYFYTLMYEAHTKGTPIARPLFFSFPQDARTYEISTQFLIGKGVIVSPVLRSGAVS 705
Y LLPY YTL + AH++G +ARPL F +D T+++ QFL G G++++PVL GA
Sbjct: 631 YTLLPYLYTLFFRAHSRGDTVARPLLHEFYEDNSTWDVHQQFLWGPGLLITPVLDEGAEK 690
Query: 706 VDAYFPGGNWFDLXXXXXXXXXXXGKQITLDAPPDHINVHVREGNILALQGEAMTTDAAR 765
V AY P W+D +++ ++ P D I +H+R G I Q TT A+R
Sbjct: 691 VMAYVPDAVWYDYETGSQVRWRK--QKVEMELPGDKIGLHLRGGYIFPTQQPNTTTLASR 748
Query: 766 KTPFQLLVVVSNTEDSTGDVF 786
K P L++ + +++ G++F
Sbjct: 749 KNPLGLIIALDENKEAKGELF 769
>pdb|2QLY|A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|2QMJ|A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
pdb|3CTT|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
With Casuarine
Length = 870
Score = 520 bits (1340), Expect = e-147, Method: Compositional matrix adjust.
Identities = 295/741 (39%), Positives = 428/741 (57%), Gaps = 55/741 (7%)
Query: 65 LTADLSLIKNSSVYGPDIYNLNLFASLETKDRLRVRLTDSNNQRWEIPQEIIPRQFHPTG 124
TA L + +S V+G ++ N+ L A +T +R +LTD N R+E+P E +
Sbjct: 65 FTARLKNLPSSPVFGSNVDNVLLTAEYQTSNRFHFKLTDQTNNRFEVPHEHV-------- 116
Query: 125 HNRSLPENHFLSDATSDLVFTLH-NTTPFGFSVSRRSSGETLFDTSPEGSNADTFLVFKD 183
F +A + L + + + PF V+RRS+ LFD+S L+F D
Sbjct: 117 -------QSFSGNAAASLTYQVEISRQPFSIKVTRRSNNRVLFDSSIGP------LLFAD 163
Query: 184 QYIQLSSALPKGSAHLYGLGEHTKKSLKLTPNSNDTLTLWNADLFAAYLDVNLYGSHPFY 243
Q++QLS+ LP S ++YGLGEH + + N T ++N D NLYG+ F+
Sbjct: 164 QFLQLSTRLP--STNVYGLGEHVHQQYRHDMNWK-TWPIFNRDTTPNGNGTNLYGAQTFF 220
Query: 244 IDVRSPNGTTHGVLLLNSNGMDVVYT-GDRITYKVIGGIIDLYFFAGPSPDSVIQQYTEF 302
+ + +G + GV L+NSN M+VV ITY+ IGGI+D Y F G +P+ V+Q+Y E
Sbjct: 221 LCLEDASGLSFGVFLMNSNAMEVVLQPAPAITYRTIGGILDFYVFLGNTPEQVVQEYLEL 280
Query: 303 IGRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLD 362
IGRPA YW+ GFH RY Y + ++ VV A +P +V DIDYMD +DFT D
Sbjct: 281 IGRPALPSYWALGFHLSRYEYGTLDNMREVVERNRAAQLPYDVQHADIDYMDERRDFTYD 340
Query: 363 PINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNS----YETYIRGIEADIFIKR-DGV 417
++F +FV+ LH NGQ+ V+I+DP IS N+S Y Y RG + I++ DGV
Sbjct: 341 SVDFKG--FPEFVNELHNNGQKLVIIVDPAISNNSSSSKPYGPYDRGSDMKIWVNSSDGV 398
Query: 418 -PYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMNEISNFITSPPTPF 476
P +G+VW G FPD+ NP +W E +LF + + DG+W+DMNE+SNF+ +
Sbjct: 399 TPLIGEVWPGQTVFPDYTNPNCAVWWTKEFELFHNQVEFDGIWIDMNEVSNFVDGSVSGC 458
Query: 477 ST--LDDPPYKINNNGTRRPINN----KTIPATAL-HYGNVTEYNVHSLYGLLEAKAT-R 528
ST L++PP+ T R ++ KT+ A+ H+G +Y++H+LYG A AT
Sbjct: 459 STNNLNNPPF------TPRILDGYLFCKTLCMDAVQHWGK--QYDIHNLYGYSMAVATAE 510
Query: 529 AALINAVGKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGA 588
AA KR F+LTRSTF SGK+ AHW GDN ATWDDL ++IP +L F LFGIPMVG
Sbjct: 511 AAKTVFPNKRSFILTRSTFAGSGKFAAHWLGDNTATWDDLRWSIPGVLEFNLFGIPMVGP 570
Query: 589 DICGFQRNTTEELCRRWIQLGAFYPFARDHSDKFKIRQELYLWDS---VAATARKVLGLR 645
DICGF +T EELCRRW+QLGAFYPF+R+H+ + Q+ + + + ++R L +R
Sbjct: 571 DICGFALDTPEELCRRWMQLGAFYPFSRNHNGQGYKDQDPASFGADSLLLNSSRHYLNIR 630
Query: 646 YRLLPYFYTLMYEAHTKGTPIARPLFFSFPQDARTYEISTQFLIGKGVIVSPVLRSGAVS 705
Y LLPY YTL + AH++G +ARPL F +D T+++ QFL G G++++PVL GA
Sbjct: 631 YTLLPYLYTLFFRAHSRGDTVARPLLHEFYEDNSTWDVHQQFLWGPGLLITPVLDEGAEK 690
Query: 706 VDAYFPGGNWFDLXXXXXXXXXXXGKQITLDAPPDHINVHVREGNILALQGEAMTTDAAR 765
V AY P W+D +++ ++ P D I +H+R G I Q TT A+R
Sbjct: 691 VMAYVPDAVWYDYETGSQVRWRK--QKVEMELPGDKIGLHLRGGYIFPTQQPNTTTLASR 748
Query: 766 KTPFQLLVVVSNTEDSTGDVF 786
K P L++ + +++ G++F
Sbjct: 749 KNPLGLIIALDENKEAKGELF 769
>pdb|3LPO|A Chain A, Crystal Structure Of The N-Terminal Domain Of
Sucrase-Isomal
pdb|3LPO|B Chain B, Crystal Structure Of The N-Terminal Domain Of
Sucrase-Isomal
pdb|3LPO|C Chain C, Crystal Structure Of The N-Terminal Domain Of
Sucrase-Isomal
pdb|3LPO|D Chain D, Crystal Structure Of The N-Terminal Domain Of
Sucrase-Isomal
pdb|3LPP|A Chain A, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
Kotala
pdb|3LPP|B Chain B, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
Kotala
pdb|3LPP|C Chain C, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
Kotala
pdb|3LPP|D Chain D, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
Kotala
Length = 898
Score = 476 bits (1226), Expect = e-134, Method: Compositional matrix adjust.
Identities = 282/756 (37%), Positives = 434/756 (57%), Gaps = 51/756 (6%)
Query: 46 YGYSILSSSSATVDTSLKSLTADLSLIKNSSVYGPDIYNLNLFASLETKDRLRVRLTDSN 105
+GY++ ++ ++ + A L+ I + +++G DI ++ +T +R R ++TD N
Sbjct: 79 HGYNVQDMTTTSI-----GVEAKLNRIPSPTLFGNDINSVLFTTQNQTPNRFRFKITDPN 133
Query: 106 NQRWEIPQEIIPRQFHPTGHNRSLPENHFLSDATSDLVFTLHNTTPFGFSVSRRSSGETL 165
N+R+E+P + + PT +SD D+ PF V R+S+G+TL
Sbjct: 134 NRRYEVPHQYVKEFTGPT-----------VSDTLYDVKVA---QNPFSIQVIRKSNGKTL 179
Query: 166 FDTSPEGSNADTFLVFKDQYIQLSSALPKGSAHLYGLGEHTKKSLKLTPNSNDTLTLWNA 225
FDTS LV+ DQY+Q+S+ LP S ++YG+GE K + S T ++
Sbjct: 180 FDTSIGP------LVYSDQYLQISARLP--SDYIYGIGEQVHKRFRHDL-SWKTWPIFTR 230
Query: 226 DLFAAYLDVNLYGSHPFYIDVRSPNGTTHGVLLLNSNGMDV-VYTGDRITYKVIGGIIDL 284
D + NLYG F++ + +G + GV L+NSN M++ + +TY+V GGI+D
Sbjct: 231 DQLPGDNNNNLYGHQTFFMCIEDTSGKSFGVFLMNSNAMEIFIQPTPIVTYRVTGGILDF 290
Query: 285 YFFAGPSPDSVIQQYTEFIGRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLE 344
Y G +P+ V+QQY + +G PA YW+ GF R+ YK++ ++ VV +A IP +
Sbjct: 291 YILLGDTPEQVVQQYQQLVGLPAMPAYWNLGFQLSRWNYKSLDVVKEVVRRNREAGIPFD 350
Query: 345 VMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVN-----NSY 399
TDIDYM+ KDFT D + F + + +FV LH +GQ+YV+ILDP IS+ +Y
Sbjct: 351 TQVTDIDYMEDKKDFTYDQVAF--NGLPQFVQDLHDHGQKYVIILDPAISIGRRANGTTY 408
Query: 400 ETYIRGIEADIFI-KRDG-VPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDG 457
TY RG ++I + DG P +G+VW G +PDF NP +W NE +F + DG
Sbjct: 409 ATYERGNTQHVWINESDGSTPIIGEVWPGLTVYPDFTNPNCIDWWANECSIFHQEVQYDG 468
Query: 458 LWLDMNEISNFI--TSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALH-YGNVTEYN 514
LW+DMNE+S+FI ++ + L+ PP+ + + + +KTI A+ +G +Y+
Sbjct: 469 LWIDMNEVSSFIQGSTKGCNVNKLNYPPF--TPDILDKLMYSKTICMDAVQNWGK--QYD 524
Query: 515 VHSLYGLLEAKATRAALINAV-GKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIP 573
VHSLYG A AT A+ KR F+LTRSTF SG++ AHW GDN A+W+ + ++I
Sbjct: 525 VHSLYGYSMAIATEQAVQKVFPNKRSFILTRSTFAGSGRHAAHWLGDNTASWEQMEWSIT 584
Query: 574 SILNFGLFGIPMVGADICGFQRNTTEELCRRWIQLGAFYPFARDH-SDKFKIRQELYLWD 632
+L F LFGIP+VGADICGF TTEELCRRW+QLGAFYPF+R+H SD ++ + +
Sbjct: 585 GMLEFSLFGIPLVGADICGFVAETTEELCRRWMQLGAFYPFSRNHNSDGYEHQDPAFFGQ 644
Query: 633 S--VAATARKVLGLRYRLLPYFYTLMYEAHTKGTPIARPLFFSFPQDARTYEISTQFLIG 690
+ + ++R+ L +RY LLP+ YTL Y+AH G +ARP+ F +D ++ T+FL G
Sbjct: 645 NSLLVKSSRQYLTIRYTLLPFLYTLFYKAHVFGETVARPVLHEFYEDTNSWIEDTEFLWG 704
Query: 691 KGVIVSPVLRSGAVSVDAYFPGGNWFDLXXXXXXXXXXXGKQITLDAPPDHINVHVREGN 750
++++PVL+ GA +V AY P W+D +++ + P D I +H+R G
Sbjct: 705 PALLITPVLKQGADTVSAYIPDAIWYDYESGAKRPWRK--QRVDMYLPADKIGLHLRGGY 762
Query: 751 ILALQGEAMTTDAARKTPFQLLVVVSNTEDSTGDVF 786
I+ +Q +TT A+RK P L+V + + GD F
Sbjct: 763 IIPIQEPDVTTTASRKNPLGLIVALGENNTAKGDFF 798
>pdb|3TON|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|3TON|B Chain B, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|3TOP|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
pdb|3TOP|B Chain B, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
Length = 908
Score = 471 bits (1212), Expect = e-133, Method: Compositional matrix adjust.
Identities = 304/813 (37%), Positives = 431/813 (53%), Gaps = 97/813 (11%)
Query: 18 AVHFCYYILALDSCSVSVAAAKDQEPVGYGYSILSSSSATVDTSLKSLTADLSLIKNSSV 77
V FCY++ L S S V Y +S AT D SLKS S+ N+
Sbjct: 41 GVPFCYFVNDLYSVS----------DVQY-----NSHGATADISLKS-----SVYANAFP 80
Query: 78 YGPDIYNLNLFASLETKDRLRVRLTDSNNQRWEIPQEI-IPRQFHPTGHNRSLPENHFLS 136
P + L L + + L+ ++ D N R+E+P + IP S+P S
Sbjct: 81 STP-VNPLRLDVTYHKNEMLQFKIYDPNKNRYEVPVPLNIP----------SMPS----S 125
Query: 137 DATSDLVFTLHNTTPFGFSVSRRSSGETLFDTSPEGSNADTFLVFKDQYIQLSSALPKGS 196
L L PFG + R+S+G ++D+ G F D +I++S+ LP S
Sbjct: 126 TPEGQLYDVLIKKNPFGIEIRRKSTGTIIWDSQLLG------FTFSDMFIRISTRLP--S 177
Query: 197 AHLYGLGEHTKKSLKLTPNSNDTLTLWNADLFAAYLDVNLYGSHPFYIDVRSPNGTTHGV 256
+LYG GE +S + + T +++ D Y N YG HP+Y+ + +G+ HGV
Sbjct: 178 KYLYGFGETEHRSYRRDLEWH-TWGMFSRDQPPGY-KKNSYGVHPYYMGLEE-DGSAHGV 234
Query: 257 LLLNSNGMDVVYTG-DRITYKVIGGIIDLYFFAGPSPDSVIQQYTEFIGRPAPMPYWSFG 315
LLLNSN MDV + +TY+ GG++D Y F GP+P+ V QQYTE IGRP +PYWS G
Sbjct: 235 LLLNSNAMDVTFQPLPALTYRTTGGVLDFYVFLGPTPELVTQQYTELIGRPVMVPYWSLG 294
Query: 316 FHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDP--INFPADQMKK 373
F CRYGY+N S++ ++ A IP +V ++DIDYM+ DFTL P FPA
Sbjct: 295 FQLCRYGYQNDSEIASLYDEMVAAQIPYDVQYSDIDYMERQLDFTLSPKFAGFPA----- 349
Query: 374 FVDTLHQNGQRYVLILDPGISVNNS--YETYIRGIEADIFIK--RDGVPYVGQVW----- 424
++ + +G R +LILDP IS N + Y + RG+E D+FIK DG G+VW
Sbjct: 350 LINRMKADGMRVILILDPAISGNETQPYPAFTRGVEDDVFIKYPNDGDIVWGKVWPDFPD 409
Query: 425 ---EGPLN-------------FPDFVNPATQTFWENEIKLFRD-------ILPLDGLWLD 461
G L+ FPDF +T +W+ EI+ + L DG+W+D
Sbjct: 410 VVVNGSLDWDSQVELYRAYVAFPDFFRNSTAKWWKREIEELYNNPQNPERSLKFDGMWID 469
Query: 462 MNEISNFI---TSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATA---LHYGN-VTEYN 514
MNE S+F+ SP ++L+ PPY + R +++KT+ + L G+ V YN
Sbjct: 470 MNEPSSFVNGAVSPGCRDASLNHPPYMPHLESRDRGLSSKTLCMESQQILPDGSLVQHYN 529
Query: 515 VHSLYGLLEAKATRAALINAVGKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPS 574
VH+LYG + + T A+ G+R ++TRSTF SSG++ HW GDN A WD L +I
Sbjct: 530 VHNLYGWSQTRPTYEAVQEVTGQRGVVITRSTFPSSGRWAGHWLGDNTAAWDQLKKSIIG 589
Query: 575 ILNFGLFGIPMVGADICGFQRNTTEELCRRWIQLGAFYPFARDHSDKFKIRQELYLWD-S 633
++ F LFGI GADICGF ++ E+C RW+QLGAFYPF+R+H+ RQ+ WD +
Sbjct: 590 MMEFSLFGISYTGADICGFFQDAEYEMCVRWMQLGAFYPFSRNHNTIGTRRQDPVSWDVA 649
Query: 634 VAATARKVLGLRYRLLPYFYTLMYEAHTKGTPIARPLFFSFPQDARTYEISTQFLIGKGV 693
+R VL RY LLPY YTLM++AHT+G + RPL F D T++I +QFL+G
Sbjct: 650 FVNISRTVLQTRYTLLPYLYTLMHKAHTEGVTVVRPLLHEFVSDQVTWDIDSQFLLGPAF 709
Query: 694 IVSPVLRSGAVSVDAYFPGGNWFDLXXXXXXXXXXXGKQITLDAPPDHINVHVREGNILA 753
+VSPVL A +V AYFP W+D G+ TL AP DHIN+HVR G IL
Sbjct: 710 LVSPVLERNARNVTAYFPRARWYDY--YTGVDINARGEWKTLPAPLDHINLHVRGGYILP 767
Query: 754 LQGEAMTTDAARKTPFQLLVVVSNTEDSTGDVF 786
Q A+ T +R+ + + + + G +F
Sbjct: 768 WQEPALNTHLSRQKFMGFKIALDDEGTAGGWLF 800
>pdb|2G3M|A Chain A, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|B Chain B, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|C Chain C, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|D Chain D, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|E Chain E, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3M|F Chain F, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala
pdb|2G3N|A Chain A, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|B Chain B, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|C Chain C, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|D Chain D, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|E Chain E, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
pdb|2G3N|F Chain F, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
Glucosidase Mala In Complex With
Beta-Octyl-Glucopyranoside
Length = 693
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 176/584 (30%), Positives = 277/584 (47%), Gaps = 53/584 (9%)
Query: 198 HLYGLGEHTKKSLKLTPNSNDTLTLWNADL--FAAYLDVNLYGSHPFYIDVRSPNGTTHG 255
H+ GLGE K+ +L ++N D + Y D LY S P +I V+ T +
Sbjct: 63 HIIGLGE---KAFELD-RKRKRYVMYNVDAGAYKKYQD-PLYVSIPLFISVKDGVATGY- 116
Query: 256 VLLLNSNGMDVVYTG----DRITYKVIGGIIDLYFFAGPSPDSVIQQYTEFIGRPAPMPY 311
NS + G D++ + ++ Y GP + V+++YTE G+P P
Sbjct: 117 --FFNSASKVIFDVGLEEYDKVIVTIPEDSVEFYVIEGPRIEDVLEKYTELTGKPFLPPM 174
Query: 312 WSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDPINFPADQM 371
W+FG+ RY Y + +V K + ++ DI YMD YK FT P FP +
Sbjct: 175 WAFGYMISRYSYYPQDKVVELVDIMQKEGFRVAGVFLDIHYMDSYKLFTWHPYRFP--EP 232
Query: 372 KKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFP 431
KK +D LH+ + + I+D GI V+ +Y ++ G+ I+ G +VG++W G +P
Sbjct: 233 KKLIDELHKRNVKLITIVDHGIRVDQNYSPFLSGMGKFCEIE-SGELFVGKMWPGTTVYP 291
Query: 432 DFVNPATQTFWENEIKLFRDILPLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNGT 491
DF T+ +W I + +DG+WLDMNE PT FS +I + +
Sbjct: 292 DFFREDTREWWAGLISEWLS-QGVDGIWLDMNE--------PTDFSR----AIEIRDVLS 338
Query: 492 RRPINNK------TIPATALHY---GNVTEYNVHSLYGLLEAKATRAALINAVGKRPFML 542
P+ + T P +HY V V + Y L EA AT + F+L
Sbjct: 339 SLPVQFRDDRLVTTFPDNVVHYLRGKRVKHEKVRNAYPLYEAMATFKGFRTSHRNEIFIL 398
Query: 543 TRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQ-RNTTE-- 599
+R+ + +Y WTGDN +WDDL + +L + G+P VG DI GFQ RN E
Sbjct: 399 SRAGYAGIQRYAFIWTGDNTPSWDDLKLQLQLVLGLSISGVPFVGCDIGGFQGRNFAEID 458
Query: 600 ---ELCRRWIQLGAFYPFARDHSDKFKIRQE-LYLWDSVAATARKVLGLRYRLLPYFYTL 655
+L ++ L F+PF R H I E ++L D ++++ LRY+ LPY Y+L
Sbjct: 459 NSMDLLVKYYALALFFPFYRSHKATDGIDTEPVFLPDYYKEKVKEIVELRYKFLPYIYSL 518
Query: 656 MYEAHTKGTPIARPLFFSFPQDARTYEISTQFLIGKGVIVSPVLRSGAVSVDAYFPGGNW 715
EA KG P+ RPLF+ F D Y I ++++GK ++ +P++ S S P G W
Sbjct: 519 ALEASEKGHPVIRPLFYEFQDDDDMYRIEDEYMVGKYLLYAPIV-SKEESRLVTLPRGKW 577
Query: 716 FDLXXXXXXXXXXXGKQITLDAPPDHINVHVREGNILALQGEAM 759
++ GK + + +++REG+I+ L+G+ +
Sbjct: 578 YNY----WNGEIINGKSVVKST--HELPIYLREGSIIPLEGDEL 615
>pdb|3PHA|A Chain A, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3PHA|B Chain B, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3PHA|C Chain C, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3PHA|D Chain D, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
Length = 667
Score = 232 bits (591), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 146/495 (29%), Positives = 236/495 (47%), Gaps = 25/495 (5%)
Query: 235 NLYGSHPFYIDVRSPNGTTHGVLLLNSNGM--DVVYTG-DRITYKVIGGIIDLYFFAGPS 291
+LYG+H F I TT G+ + + D+ YT D + +D+Y G +
Sbjct: 86 SLYGAHNFII---VSGKTTFGLFFDYPSKLTFDIGYTRMDTLKVSCENADLDIYVIEGEN 142
Query: 292 PDSVIQQYTEFIGRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDID 351
+++Q+ IGR P ++FGF Q RYGY D AV GY + IP+++++ DID
Sbjct: 143 AYDIVKQFRRVIGRSYIPPKFAFGFGQSRYGYTTKEDFRAVAKGYRENHIPIDMIYMDID 202
Query: 352 YMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIF 411
YM +KDFT++ NFP +FV + R + I+D G+ V YE Y G++ + F
Sbjct: 203 YMQDFKDFTVNEKNFP--DFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVKNNYF 260
Query: 412 IKR-DGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMNEISNFIT 470
KR DG +V VW G +FPD +NP + ++ ++ + D ++G W DMNE + F +
Sbjct: 261 CKREDGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLID-QGIEGFWNDMNEPAIFYS 319
Query: 471 SPPTPFSTLDDPPYKINNNGTRRP----------INNKTIPATALHYGN---VTEYNVHS 517
S + + + G P +N+ H N + VH+
Sbjct: 320 SEGLAEAKEFAGEFAKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDKVHN 379
Query: 518 LYGLLEAKATRAALINA-VGKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSIL 576
L+G +A A KR M +RS+++ +Y W GDN + W + + +
Sbjct: 380 LFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLKMLP 439
Query: 577 NFGLFGIPMVGADICGFQRNTTEELCRRWIQLGAFYPFARDHSDKFKIRQELYLWDSVAA 636
+ + G GAD+ GF +TT +L R++ LG F P RDH+ + QE Y ++++
Sbjct: 440 SLNMCGFMYTGADLGGFGDDTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQFENI-E 498
Query: 637 TARKVLGLRYRLLPYFYTLMYEAHTKGTPIARPLFFSFPQDARTYEISTQFLIGKGVIVS 696
R V+ RYRL+PY Y+ +A +PL F +P D + Q ++G ++++
Sbjct: 499 DFRSVINARYRLVPYLYSEYMKAALNDDMYFKPLGFVYPDDKMAIRVEDQLMLGNEIMIA 558
Query: 697 PVLRSGAVSVDAYFP 711
PV A Y P
Sbjct: 559 PVYEQNARGRYVYLP 573
>pdb|3NUK|A Chain A, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174
pdb|3NUK|B Chain B, The Crystal Structure Of The W169y Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174
Length = 666
Score = 232 bits (591), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 146/495 (29%), Positives = 236/495 (47%), Gaps = 25/495 (5%)
Query: 235 NLYGSHPFYIDVRSPNGTTHGVLLLNSNGM--DVVYTG-DRITYKVIGGIIDLYFFAGPS 291
+LYG+H F I TT G+ + + D+ YT D + +D+Y G +
Sbjct: 86 SLYGAHNFII---VSGKTTFGLFFDYPSKLTFDIGYTRMDTLKVSCENADLDIYVIEGEN 142
Query: 292 PDSVIQQYTEFIGRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDID 351
+++Q+ IGR P ++FGF Q RYGY D AV GY + IP+++++ DID
Sbjct: 143 AYDIVKQFRRVIGRSYIPPKFAFGFGQSRYGYTTKEDFRAVAKGYRENHIPIDMIYMDID 202
Query: 352 YMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIF 411
YM +KDFT++ NFP +FV + R + I+D G+ V YE Y G++ + F
Sbjct: 203 YMQDFKDFTVNEKNFP--DFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVKNNYF 260
Query: 412 IKR-DGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMNEISNFIT 470
KR DG +V VW G +FPD +NP + ++ ++ + D ++G W DMNE + F +
Sbjct: 261 CKREDGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLID-QGIEGFWNDMNEPAIFYS 319
Query: 471 SPPTPFSTLDDPPYKINNNGTRRP----------INNKTIPATALHYGN---VTEYNVHS 517
S + + + G P +N+ H N + VH+
Sbjct: 320 SEGLAEAKEFAGEFAKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDKVHN 379
Query: 518 LYGLLEAKATRAALINA-VGKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSIL 576
L+G +A A KR M +RS+++ +Y W GDN + W + + +
Sbjct: 380 LFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLKMLP 439
Query: 577 NFGLFGIPMVGADICGFQRNTTEELCRRWIQLGAFYPFARDHSDKFKIRQELYLWDSVAA 636
+ + G GAD+ GF +TT +L R++ LG F P RDH+ + QE Y ++++
Sbjct: 440 SLNMCGFMYTGADLGGFGDDTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQFENI-E 498
Query: 637 TARKVLGLRYRLLPYFYTLMYEAHTKGTPIARPLFFSFPQDARTYEISTQFLIGKGVIVS 696
R V+ RYRL+PY Y+ +A +PL F +P D + Q ++G ++++
Sbjct: 499 DFRSVINARYRLVPYLYSEYMKAALNDDMYFKPLGFVYPDDKMAIRVEDQLMLGNEIMIA 558
Query: 697 PVLRSGAVSVDAYFP 711
PV A Y P
Sbjct: 559 PVYEQNARGRYVYLP 573
>pdb|3M46|A Chain A, The Crystal Structure Of The D73a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
pdb|3M46|B Chain B, The Crystal Structure Of The D73a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
Length = 666
Score = 231 bits (588), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 152/531 (28%), Positives = 248/531 (46%), Gaps = 28/531 (5%)
Query: 199 LYGLGEHTKKSLKLTPNSNDTLTLWNADLFAAYLDVNLYGSHPFYIDVRSPNGTTHGVLL 258
+YGLGE + + ++ AD +LYG+H F I TT G+
Sbjct: 53 VYGLGESNRG---INKRGYCYISNCTADPIHTEDKRSLYGAHNFII---VSGKTTFGLFF 106
Query: 259 LNSNGM--DVVYTG-DRITYKVIGGIIDLYFFAGPSPDSVIQQYTEFIGRPAPMPYWSFG 315
+ + D+ YT D + +D+Y G + +++Q+ IGR P ++FG
Sbjct: 107 DYPSKLTFDIGYTRMDTLKVSCENADLDIYVIEGENAYDIVKQFRRVIGRSYIPPKFAFG 166
Query: 316 FHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDPINFPADQMKKFV 375
F Q R+GY D AV GY + IP+++++ DIDYM +KDFT++ NFP +FV
Sbjct: 167 FGQSRWGYTTKEDFRAVAKGYRENHIPIDMIYMDIDYMQDFKDFTVNEKNFP--DFPEFV 224
Query: 376 DTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKR-DGVPYVGQVWEGPLNFPDFV 434
+ R + I+D G+ V YE Y G++ + F KR DG +V VW G +FPD +
Sbjct: 225 KEMKDQELRLIPIIDAGVKVEKGYEVYEEGVKNNYFCKREDGSDFVAAVWPGDTHFPDML 284
Query: 435 NPATQTFWENEIKLFRDILPLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNGTRRP 494
NP + ++ ++ + D ++G W DMNE + F +S + + + G P
Sbjct: 285 NPEARKWFGDKYRFLID-QGIEGFWNDMNEPAIFYSSEGLAEAKEFAGEFAKDTEGKIHP 343
Query: 495 ----------INNKTIPATALHYGN---VTEYNVHSLYGLLEAKATRAALINA-VGKRPF 540
+N+ H N + VH+L+G +A A KR
Sbjct: 344 WAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDKVHNLFGYNMTRAAGEAFERIDPEKRFL 403
Query: 541 MLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRNTTEE 600
M +RS+++ +Y W GDN + W + + + + + G GAD+ GF +TT +
Sbjct: 404 MFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLKMLPSLNMCGFMYTGADLGGFGDDTTRD 463
Query: 601 LCRRWIQLGAFYPFARDHSDKFKIRQELYLWDSVAATARKVLGLRYRLLPYFYTLMYEAH 660
L R++ LG F P RDH+ + QE Y ++++ R V+ RYRL+PY Y+ +A
Sbjct: 464 LLLRFLALGVFTPLMRDHAAEGTREQECYQFENI-EDFRSVINARYRLVPYLYSEYMKAA 522
Query: 661 TKGTPIARPLFFSFPQDARTYEISTQFLIGKGVIVSPVLRSGAVSVDAYFP 711
+PL F +P D + Q ++G ++++PV A Y P
Sbjct: 523 LNDDMYFKPLGFVYPDDKMAIRVEDQLMLGNEIMIAPVYEQNARGRYVYLP 573
>pdb|3NSX|A Chain A, The Crystal Structure Of The The Crystal Structure Of The
D420a Mutant Of The Alpha-Glucosidase (Family 31) From
Ruminococcus Obeum Atcc 29174
pdb|3NSX|B Chain B, The Crystal Structure Of The The Crystal Structure Of The
D420a Mutant Of The Alpha-Glucosidase (Family 31) From
Ruminococcus Obeum Atcc 29174
Length = 666
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 144/495 (29%), Positives = 235/495 (47%), Gaps = 25/495 (5%)
Query: 235 NLYGSHPFYIDVRSPNGTTHGVLLLNSNGM--DVVYTG-DRITYKVIGGIIDLYFFAGPS 291
+LYG+H F I TT G+ + + D+ YT D + +D+Y G +
Sbjct: 86 SLYGAHNFII---VSGKTTFGLFFDYPSKLTFDIGYTRMDTLKVSCENADLDIYVIEGEN 142
Query: 292 PDSVIQQYTEFIGRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDID 351
+++Q+ IGR P ++FGF Q R+GY D AV GY + IP+++++ DID
Sbjct: 143 AYDIVKQFRRVIGRSYIPPKFAFGFGQSRWGYTTKEDFRAVAKGYRENHIPIDMIYMDID 202
Query: 352 YMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIF 411
YM +KDFT++ NFP +FV + R + I+D G+ V YE Y G++ + F
Sbjct: 203 YMQDFKDFTVNEKNFP--DFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVKNNYF 260
Query: 412 IKR-DGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMNEISNFIT 470
KR DG +V VW G +FPD +NP + ++ ++ + D ++G W DMNE + F +
Sbjct: 261 CKREDGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLID-QGIEGFWNDMNEPAIFYS 319
Query: 471 SPPTPFSTLDDPPYKINNNGTRRP----------INNKTIPATALHYGN---VTEYNVHS 517
S + + + G P +N+ H N + VH+
Sbjct: 320 SEGLAEAKEFAGEFAKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDKVHN 379
Query: 518 LYGLLEAKATRAALINA-VGKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSIL 576
L+G +A A KR M +RS+++ +Y W G N + W + + +
Sbjct: 380 LFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWMGANKSWWSHILLNLKMLP 439
Query: 577 NFGLFGIPMVGADICGFQRNTTEELCRRWIQLGAFYPFARDHSDKFKIRQELYLWDSVAA 636
+ + G GAD+ GF +TT +L R++ LG F P RDH+ + QE Y ++++
Sbjct: 440 SLNMCGFMYTGADLGGFGDDTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQFENI-E 498
Query: 637 TARKVLGLRYRLLPYFYTLMYEAHTKGTPIARPLFFSFPQDARTYEISTQFLIGKGVIVS 696
R V+ RYRL+PY Y+ +A +PL F +P D + Q ++G ++++
Sbjct: 499 DFRSVINARYRLVPYLYSEYMKAALNDDMYFKPLGFVYPDDKMAIRVEDQLMLGNEIMIA 558
Query: 697 PVLRSGAVSVDAYFP 711
PV A Y P
Sbjct: 559 PVYEQNARGRYVYLP 573
>pdb|3M6D|A Chain A, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
pdb|3M6D|B Chain B, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
pdb|3MKK|A Chain A, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
In Complex With Isomaltose
pdb|3MKK|B Chain B, The Crystal Structure Of The D307a Mutant Of Glycoside
Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
In Complex With Isomaltose
pdb|3POC|A Chain A, The Crystal Structure Of The D307a Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
pdb|3POC|B Chain B, The Crystal Structure Of The D307a Mutant Of
Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
Atcc 29174 In Complex With Acarbose
Length = 666
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 144/495 (29%), Positives = 235/495 (47%), Gaps = 25/495 (5%)
Query: 235 NLYGSHPFYIDVRSPNGTTHGVLLLNSNGM--DVVYTG-DRITYKVIGGIIDLYFFAGPS 291
+LYG+H F I TT G+ + + D+ YT D + +D+Y G +
Sbjct: 86 SLYGAHNFII---VSGKTTFGLFFDYPSKLTFDIGYTRMDTLKVSCENADLDIYVIEGEN 142
Query: 292 PDSVIQQYTEFIGRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDID 351
+++Q+ IGR P ++FGF Q R+GY D AV GY + IP+++++ DID
Sbjct: 143 AYDIVKQFRRVIGRSYIPPKFAFGFGQSRWGYTTKEDFRAVAKGYRENHIPIDMIYMDID 202
Query: 352 YMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIF 411
YM +KDFT++ NFP +FV + R + I+D G+ V YE Y G++ + F
Sbjct: 203 YMQDFKDFTVNEKNFP--DFPEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVKNNYF 260
Query: 412 IKR-DGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMNEISNFIT 470
KR DG +V VW G +FPD +NP + ++ ++ + D ++G W MNE + F +
Sbjct: 261 CKREDGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLID-QGIEGFWNAMNEPAIFYS 319
Query: 471 SPPTPFSTLDDPPYKINNNGTRRP----------INNKTIPATALHYGN---VTEYNVHS 517
S + + + G P +N+ H N + VH+
Sbjct: 320 SEGLAEAKEFAGEFAKDTEGKIHPWAMQAKMKDIVNSPEDYKRFYHNVNGKKIRHDKVHN 379
Query: 518 LYGLLEAKATRAALINA-VGKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSIL 576
L+G +A A KR M +RS+++ +Y W GDN + W + + +
Sbjct: 380 LFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLKMLP 439
Query: 577 NFGLFGIPMVGADICGFQRNTTEELCRRWIQLGAFYPFARDHSDKFKIRQELYLWDSVAA 636
+ + G GAD+ GF +TT +L R++ LG F P RDH+ + QE Y ++++
Sbjct: 440 SLNMCGFMYTGADLGGFGDDTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQFENI-E 498
Query: 637 TARKVLGLRYRLLPYFYTLMYEAHTKGTPIARPLFFSFPQDARTYEISTQFLIGKGVIVS 696
R V+ RYRL+PY Y+ +A +PL F +P D + Q ++G ++++
Sbjct: 499 DFRSVINARYRLVPYLYSEYMKAALNDDMYFKPLGFVYPDDKMAIRVEDQLMLGNEIMIA 558
Query: 697 PVLRSGAVSVDAYFP 711
PV A Y P
Sbjct: 559 PVYEQNARGRYVYLP 573
>pdb|3N04|A Chain A, The Crystal Structure Of The Alpha-Glucosidase (Family 31)
From Ruminococcus Obeum Atcc 29174
pdb|3N04|B Chain B, The Crystal Structure Of The Alpha-Glucosidase (Family 31)
From Ruminococcus Obeum Atcc 29174
Length = 666
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/495 (28%), Positives = 230/495 (46%), Gaps = 25/495 (5%)
Query: 235 NLYGSHPFYIDVRSPNGTTHGVLLLNSNGM--DVVYT-GDRITYKVIGGIIDLYFFAGPS 291
+LYG+H F I TT G+ + + D+ YT D + +D+Y G +
Sbjct: 86 SLYGAHNFII---VSGKTTFGLFFDYPSKLTFDIGYTRXDTLKVSCENADLDIYVIEGEN 142
Query: 292 PDSVIQQYTEFIGRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDID 351
+++Q+ IGR P ++FGF Q R+GY D AV GY + IP++ ++ DID
Sbjct: 143 AYDIVKQFRRVIGRSYIPPKFAFGFGQSRWGYTTKEDFRAVAKGYRENHIPIDXIYXDID 202
Query: 352 YMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIF 411
Y +KDFT++ NFP +FV R + I+D G+ V YE Y G++ + F
Sbjct: 203 YXQDFKDFTVNEKNFP--DFPEFVKEXKDQELRLIPIIDAGVKVEKGYEVYEEGVKNNYF 260
Query: 412 IKR-DGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMNEISNFIT 470
KR DG +V VW G +FPD +NP + ++ ++ + D ++G W D NE + F +
Sbjct: 261 CKREDGSDFVAAVWPGDTHFPDXLNPEARKWFGDKYRFLID-QGIEGFWNDXNEPAIFYS 319
Query: 471 SPPTPFSTLDDPPYKINNNGTRRP----------INNKTIPATALHYGN---VTEYNVHS 517
S + + + G P +N+ H N + VH+
Sbjct: 320 SEGLAEAKEFAGEFAKDTEGKIHPWAXQAKXKDIVNSPEDYKRFYHNVNGKKIRHDKVHN 379
Query: 518 LYGLLEAKATRAALINAVGKRPFM-LTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSIL 576
L+G +A A ++ F+ +RS+++ +Y W GDN + W + + +
Sbjct: 380 LFGYNXTRAAGEAFERIDPEKRFLXFSRSSYIGXHRYGGIWXGDNKSWWSHILLNLKXLP 439
Query: 577 NFGLFGIPMVGADICGFQRNTTEELCRRWIQLGAFYPFARDHSDKFKIRQELYLWDSVAA 636
+ G GAD+ GF +TT +L R++ LG F P RDH+ + QE Y ++++
Sbjct: 440 SLNXCGFXYTGADLGGFGDDTTRDLLLRFLALGVFTPLXRDHAAEGTREQECYQFENI-E 498
Query: 637 TARKVLGLRYRLLPYFYTLMYEAHTKGTPIARPLFFSFPQDARTYEISTQFLIGKGVIVS 696
R V+ RYRL+PY Y+ +A +PL F +P D + Q +G + ++
Sbjct: 499 DFRSVINARYRLVPYLYSEYXKAALNDDXYFKPLGFVYPDDKXAIRVEDQLXLGNEIXIA 558
Query: 697 PVLRSGAVSVDAYFP 711
PV A Y P
Sbjct: 559 PVYEQNARGRYVYLP 573
>pdb|4B9Y|A Chain A, Crystal Structure Of Apo Agd31b, Alpha-transglucosylase In
Glycoside Hydrolase Family 31
pdb|4B9Z|A Chain A, Crystal Structure Of Agd31b, Alpha-transglucosylase,
Complexed With Acarbose
pdb|4BA0|A Chain A, Crystal Structure Of Agd31b, Alpha-transglucosylase,
Complexed With 5f-alpha-glcf
Length = 817
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 136/526 (25%), Positives = 216/526 (41%), Gaps = 59/526 (11%)
Query: 261 SNGMDVVYT-GDRITYKVIGGIIDLYFFAGPSPDSVIQQYTEFIGRPAPMPYWSFGFHQC 319
S MD+ T D + + G AG S S+I+ +T+ GR P W+ G
Sbjct: 210 SGAMDIGKTESDILQLEAKSGRSAYILVAGNSYPSLIENFTQVTGRQPLPPRWALGSFAS 269
Query: 320 RYGYKNVSDLEAVVAGYAKAVIPLEVM-----WTDIDYMDGYKDFTLDPINFPA--DQMK 372
R+GY++ ++ A V Y PL+ + W D + D NFP D M
Sbjct: 270 RFGYRSEAETRATVQKYKTEDFPLDTIVLDLYWFGKDIKGHMGNLDWDKENFPTPLDMMA 329
Query: 373 KFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKR-DGVPYVGQVWEGPLNFP 431
F Q G + VLI +P V S + + ++A K G P +++ G
Sbjct: 330 DF----KQQGVKTVLITEP--FVLTSSKRWDDAVKAKALAKDPQGQPKAFELYFGNGGII 383
Query: 432 DFVNPATQTFWENEIKLFRDILP--LDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNN 489
D + ++ + +++D+ + G W D+ E P +D + I +
Sbjct: 384 DVFSKEGSRWFSS---IYKDLSKQGVAGWWGDLGE----------PEMHPEDTQHAIGDA 430
Query: 490 GTRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALINAVGK-RPFMLTRSTFV 548
T VH+ YG A+ ++ + RPF++ R+ FV
Sbjct: 431 DT-----------------------VHNAYGHRWAEMLYQQQLDQFPELRPFIMMRAGFV 467
Query: 549 SSGKY-TAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRNTT--EELCRRW 605
S +Y WTGD + TW LA + L L G + +D+ GF T +E+ RW
Sbjct: 468 GSQRYGMIPWTGDVSRTWGGLASQVELALQMSLLGFGYIHSDLGGFADGETLDKEMYIRW 527
Query: 606 IQLGAFYPFARDHSDKFKIRQELYLWDSVAATARKVLGLRYRLLPYFYTLMYEAHTKGTP 665
+Q G F P R H + ++ + A R ++ LRYR+LPY YT Y+ G P
Sbjct: 528 LQYGVFQPVYRPHGQDHIPSEPVFQDEETKAILRPLVKLRYRMLPYIYTAAYQNTLTGMP 587
Query: 666 IARPLFFSFPQDARTYEISTQFLIGKGVIVSPVLRSGAVSVDAYFPGGNWFDLXXXXXXX 725
+ RPLFFS ++ + T + G ++V+P+ ++G SV P G WFD
Sbjct: 588 LMRPLFFSDEKNPALIDNKTSYFWGDSLLVTPITQAGVESVSIPAPKGVWFDF--WKDTR 645
Query: 726 XXXXGKQITLDAPPDHINVHVREGNILALQGEAMTTDAARKTPFQL 771
G +TL I V V+ G + TT+ R ++
Sbjct: 646 YQTDGAPLTLPTDLHTIPVLVKAGAFMPYVPAVSTTEDYRSDSLEI 691
>pdb|1XSI|A Chain A, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|B Chain B, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|C Chain C, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|D Chain D, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|E Chain E, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSI|F Chain F, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|A Chain A, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|B Chain B, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|C Chain C, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|D Chain D, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|E Chain E, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSJ|F Chain F, Structure Of A Family 31 Alpha Glycosidase
pdb|1XSK|A Chain A, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|B Chain B, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|C Chain C, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|D Chain D, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|E Chain E, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
pdb|1XSK|F Chain F, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
Intermediate
Length = 778
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 139/567 (24%), Positives = 230/567 (40%), Gaps = 68/567 (11%)
Query: 199 LYGLGEHTKKSLKLTPNSNDTLTLWNADLFAAYLDVNLYGSHPFYIDVRSPNGTTHGVLL 258
+YGLGE ++ + T+ WN D Y + PFY+ R +GVL+
Sbjct: 162 VYGLGERFTALVR----NGQTVETWNRD--GGTSTEQAYKNIPFYMTNRG-----YGVLV 210
Query: 259 LNSNGMDVVYTGDRIT---YKVIGGIIDLYFFAGPSPDSVIQQYTEFIGRPAPMPYWSFG 315
+ + ++++ + V ++ + GP+P +V+ +YT F GRPA P WSFG
Sbjct: 211 NHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFG 270
Query: 316 FHQCRYGYKNVSD--LEAVVAGYAKAVIPLEVMWTDIDYMDGYK--DFTLDPINFPADQM 371
N + + + + G A+ +PL V D +M ++ DF DP+ FP +
Sbjct: 271 LWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPE- 329
Query: 372 KKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKR-DGVPYVGQVWEGPLNF 430
+ L G + + ++P I + ++ E +KR DG + W+ L
Sbjct: 330 -GMIRRLKAKGLKICVWINPYIGQKSPVFKELQ--EKGYLLKRPDGSLWQWDKWQPGLAI 386
Query: 431 PDFVNPATQTFWENEIKLFRDILPLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNG 490
DF NP ++ +++K GL ++ + T F
Sbjct: 387 YDFTNPDACKWYADKLK---------GL------VAMGVDCFKTDFG------------- 418
Query: 491 TRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALINAVGKRPFML-TRSTFVS 549
+ IP + +H+ Y + + L + VG+ +L RS V
Sbjct: 419 -------ERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVG 471
Query: 550 SGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRNTTEELCRRWIQLG 609
+ K+ HW GD A ++ +A ++ L+ GL G DI GF+ + +RW G
Sbjct: 472 AQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFG 531
Query: 610 AFYPFARDHSDKFKIRQELYLWDSVAATARKVLGLRYRLLPYFYTLMYEAHTKGTPIARP 669
+R H K R D R L+ R++PY Y A+ +GTP+ R
Sbjct: 532 LLSSHSRLHGSK-SYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRA 590
Query: 670 LFFSFPQDARTYEISTQFLIGKGVIVSPVLRSGAVSVDAYFPGGNWFDLXXXXXXXXXXX 729
+ FP D + Q+++G V+V+PV + A V Y P G W L
Sbjct: 591 MMMEFPDDPACDYLDRQYMLGDNVMVAPVF-TEAGDVQFYLPEGRWTHLWHNDELDGSRW 649
Query: 730 GKQIT--LDAPPDHINVHVREGNILAL 754
KQ L P V+VR+ +LAL
Sbjct: 650 HKQQHGFLSLP-----VYVRDNTLLAL 671
>pdb|2F2H|A Chain A, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|B Chain B, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|C Chain C, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|D Chain D, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|E Chain E, Structure Of The Yici Thiosugar Michaelis Complex
pdb|2F2H|F Chain F, Structure Of The Yici Thiosugar Michaelis Complex
Length = 773
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 139/567 (24%), Positives = 230/567 (40%), Gaps = 68/567 (11%)
Query: 199 LYGLGEHTKKSLKLTPNSNDTLTLWNADLFAAYLDVNLYGSHPFYIDVRSPNGTTHGVLL 258
+YGLGE ++ + T+ WN D Y + PFY+ R +GVL+
Sbjct: 162 VYGLGERFTALVR----NGQTVETWNRD--GGTSTEQAYKNIPFYMTNRG-----YGVLV 210
Query: 259 LNSNGMDVVYTGDRIT---YKVIGGIIDLYFFAGPSPDSVIQQYTEFIGRPAPMPYWSFG 315
+ + ++++ + V ++ + GP+P +V+ +YT F GRPA P WSFG
Sbjct: 211 NHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFG 270
Query: 316 FHQCRYGYKNVSD--LEAVVAGYAKAVIPLEVMWTDIDYMDGYK--DFTLDPINFPADQM 371
N + + + + G A+ +PL V D +M ++ DF DP+ FP +
Sbjct: 271 LWLTTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPE- 329
Query: 372 KKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKR-DGVPYVGQVWEGPLNF 430
+ L G + + ++P I + ++ E +KR DG + W+ L
Sbjct: 330 -GMIRRLKAKGLKICVWINPYIGQKSPVFKELQ--EKGYLLKRPDGSLWQWDKWQPGLAI 386
Query: 431 PDFVNPATQTFWENEIKLFRDILPLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNG 490
DF NP ++ +++K GL ++ + T F
Sbjct: 387 YDFTNPDACKWYADKLK---------GL------VAMGVDCFKTDFG------------- 418
Query: 491 TRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALINAVGKRPFML-TRSTFVS 549
+ IP + +H+ Y + + L + VG+ +L RS V
Sbjct: 419 -------ERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVG 471
Query: 550 SGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRNTTEELCRRWIQLG 609
+ K+ HW GD A ++ +A ++ L+ GL G DI GF+ + +RW G
Sbjct: 472 AQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFG 531
Query: 610 AFYPFARDHSDKFKIRQELYLWDSVAATARKVLGLRYRLLPYFYTLMYEAHTKGTPIARP 669
+R H K R D R L+ R++PY Y A+ +GTP+ R
Sbjct: 532 LLSSHSRLHGSK-SYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRA 590
Query: 670 LFFSFPQDARTYEISTQFLIGKGVIVSPVLRSGAVSVDAYFPGGNWFDLXXXXXXXXXXX 729
+ FP D + Q+++G V+V+PV + A V Y P G W L
Sbjct: 591 MMMEFPDDPACDYLDRQYMLGDNVMVAPVF-TEAGDVQFYLPEGRWTHLWHNDELDGSRW 649
Query: 730 GKQIT--LDAPPDHINVHVREGNILAL 754
KQ L P V+VR+ +LAL
Sbjct: 650 HKQQHGFLSLP-----VYVRDNTLLAL 671
>pdb|2XVG|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From
Cellvibrio Japonicus
pdb|2XVK|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From
Cellvibrio Japonicus In Complex With
5-Fluoro-Alpha-D-Xylopyranosyl Fluoride
pdb|2XVL|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From
Cellvibrio Japonicus In Complex With Pentaerythritol
Propoxylate (5 4 Po Oh)
Length = 1020
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 141/543 (25%), Positives = 222/543 (40%), Gaps = 71/543 (13%)
Query: 279 GGIIDLYFFAGPSPDSVIQQYTEFIGRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAK 338
G ID YF AG + D +I Y + G+ +P W++GF Q R YK+ ++ + Y
Sbjct: 400 GKAIDYYFVAGDTKDDIISGYRQLTGKSVMLPKWAYGFWQSRERYKSSDEIIQNLKEYRD 459
Query: 339 AVIPLEVMWTDIDYM--DGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGI--S 394
IP++ + D Y D + D FP K VD +H + ++ + P +
Sbjct: 460 RKIPIDNIVLDWSYWPEDAWGSHDFDKQFFP--DPKALVDKVHAMNAQIMISVWPKFYPT 517
Query: 395 VNNSYETYIRGIEADIFIKRDGVPYVGQVWEGPLN--FPDFVNPATQTFWENEIKLFRDI 452
+N E +G + + + ++G+ G LN + F AT FW+ +I+ ++
Sbjct: 518 TDNYKELNAKGFMFNRNLDEKNLDWIGK---GYLNAFYDPFSPEATAIFWK-QIRDKINV 573
Query: 453 LPLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTE 512
D WLD E P S L + T GN E
Sbjct: 574 HGFDAWWLDAVE--------PDIHSNL--------------TFEKRKWLMTPNARGNGAE 611
Query: 513 YNVHSLYGLLEAKATRAALINAVG-KRPFMLTRSTFVSSGKY-TAHWTGDNAATWDDLAY 570
+ + Y + A+ + G KR F+LTRS F + +A W+GD + W D+
Sbjct: 612 --IFNAYAVPHAEGVYQGELATDGDKRSFILTRSGFGGIQRTGSAIWSGDIVSRWSDMKD 669
Query: 571 TIPSILNFGLFGIPMVGADICGF-----------------------QRNTTEELCRRWIQ 607
I + + L G+ DI GF Q + +EL RW Q
Sbjct: 670 QIAAGIGTNLAGVTNWTFDIGGFTPEDRFRHGKKGFVGSWTALDAEQVDEWQELNTRWYQ 729
Query: 608 LGAFYPFARDHSDKFKIRQELYLWDSVAATARKVL---GLRYRLLPYFYTLMYEAHTKGT 664
GAF P R H R+ + D ++ LRY L+PY YTL + + K
Sbjct: 730 FGAFVPLYRSHGQN-PYREIFNIADEGTEVYNAMVWYTKLRYYLMPYIYTLGGDTYHKDG 788
Query: 665 PIARPLFFSFPQDARTYEISTQFLIGKGVIVSPVLRSGAVSVDAYFPGG-NWFDLXXXXX 723
I R L FP D + ++I+TQ++ G +V+PV A S D Y P G +W++
Sbjct: 789 TIMRGLVMDFPNDRKAWDINTQYMFGPAFLVNPVYEYKARSRDVYLPAGSDWYNF---YT 845
Query: 724 XXXXXXGKQITLDAPPDHINVHVREGNILALQGEAMTTDAARKTPFQLLVVVSNTEDSTG 783
G+ IT DAP + + V+ G I+ D +P LL+ V + +
Sbjct: 846 GEKLAGGQTITADAPLARVPLFVKAGAIVPTGPLIQHVDEGLNSP--LLITVYTGANGSF 903
Query: 784 DVF 786
D++
Sbjct: 904 DIY 906
>pdb|1WE5|A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|B Chain B, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|C Chain C, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|D Chain D, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|E Chain E, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
pdb|1WE5|F Chain F, Crystal Structure Of Alpha-Xylosidase From Escherichia
Coli
Length = 772
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 138/567 (24%), Positives = 220/567 (38%), Gaps = 68/567 (11%)
Query: 199 LYGLGEHTKKSLKLTPNSNDTLTLWNADLFAAYLDVNLYGSHPFYIDVRSPNGTTHGVLL 258
+YGLGE ++ + T+ WN D Y + PFY R +GVL+
Sbjct: 162 VYGLGERFTALVR----NGQTVETWNRD--GGTSTEQAYKNIPFYXTNRG-----YGVLV 210
Query: 259 LNSNGMDVVYTGDRIT---YKVIGGIIDLYFFAGPSPDSVIQQYTEFIGRPAPMPYWSFG 315
+ + ++++ + V ++ + GP+P +V+ +YT F GRPA P WSFG
Sbjct: 211 NHPQCVSFEVGSEKVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFG 270
Query: 316 FHQCRYGYKNVSD--LEAVVAGYAKAVIPLEVMWTDIDYMDGYK--DFTLDPINFPADQM 371
N + + + + G A+ +PL V D + ++ DF DP+ FP
Sbjct: 271 LWLTTSFTTNYDEATVNSFIDGXAERNLPLHVFHFDCFWXKAFQWCDFEWDPLTFP--DP 328
Query: 372 KKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKR-DGVPYVGQVWEGPLNF 430
+ + L G + + ++P I + ++ E +KR DG + W+ L
Sbjct: 329 EGXIRRLKAKGLKICVWINPYIGQKSPVFKELQ--EKGYLLKRPDGSLWQWDKWQPGLAI 386
Query: 431 PDFVNPATQTFWENEIKLFRDILPLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNG 490
DF NP ++ +++K GL ++ + T F
Sbjct: 387 YDFTNPDACKWYADKLK---------GL------VAXGVDCFKTDFG------------- 418
Query: 491 TRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALINAVGKRPFML-TRSTFVS 549
+ IP + H+ Y + + L + VG+ +L RS V
Sbjct: 419 -------ERIPTDVQWFDGSDPQKXHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVG 471
Query: 550 SGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRNTTEELCRRWIQLG 609
+ K+ HW GD A ++ A ++ L+ GL G DI GF+ + +RW G
Sbjct: 472 AQKFPVHWGGDCYANYESXAESLRGGLSIGLSGFGFWSHDIGGFENTAPAHVYKRWCAFG 531
Query: 610 AFYPFARDHSDKFKIRQELYLWDSVAATARKVLGLRYRLLPYFYTLMYEAHTKGTPIARP 669
+R H K R D R L+ R PY Y A+ +GTP R
Sbjct: 532 LLSSHSRLHGSK-SYRVPWAYDDESCDVVRFFTQLKCRXXPYLYREAARANARGTPXXRA 590
Query: 670 LFFSFPQDARTYEISTQFLIGKGVIVSPVLRSGAVSVDAYFPGGNWFDLXXXXXXXXXXX 729
FP D + Q+ +G V V+PV + A V Y P G W L
Sbjct: 591 XXXEFPDDPACDYLDRQYXLGDNVXVAPVF-TEAGDVQFYLPEGRWTHLWHNDELDGSRW 649
Query: 730 GKQIT--LDAPPDHINVHVREGNILAL 754
KQ L P V+VR+ +LAL
Sbjct: 650 HKQQHGFLSLP-----VYVRDNTLLAL 671
>pdb|2X2H|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase
pdb|2X2H|B Chain B, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase
pdb|2X2H|C Chain C, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase
pdb|2X2H|D Chain D, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase
pdb|2X2I|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Acarbose
pdb|2X2I|B Chain B, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Acarbose
pdb|2X2I|C Chain C, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Acarbose
pdb|2X2I|D Chain D, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Acarbose
pdb|2X2J|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
pdb|2X2J|B Chain B, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
pdb|2X2J|C Chain C, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
pdb|2X2J|D Chain D, Crystal Structure Of The Gracilariopsis Lemaneiformis
Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
Length = 1027
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 156/675 (23%), Positives = 258/675 (38%), Gaps = 119/675 (17%)
Query: 239 SHPFYIDVRSPNGTTHGVLLLNSNGMDVVYTGDRITYKVIGGIIDLYFF--AGPSPDSVI 296
S+ +++D S + G NS D+ Y G + G D +F AG + V+
Sbjct: 274 SYGWFMDNVSQSYMNTGDTTWNSGQEDLAYMGAQY------GPFDQHFVYGAGGGMEXVV 327
Query: 297 QQYTEFIG----------RPAPMPYWSFGFHQCRYGY-----------KNVSDLEAVVAG 335
++ G R P + FGF Q +G +N +E +V G
Sbjct: 328 TAFSLLQGKEFENQVLNKRSVMPPKYVFGFFQGVFGTSSLLRAHMPAGENNISVEEIVEG 387
Query: 336 YAKAVIPLEVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISV 395
Y P E + D+D D + FT + A+++ D N + D G+
Sbjct: 388 YQNNNFPFEGLAVDVDMQDNLRVFTTKGEFWTANRVGTGGDP--NNRSVFEWAHDKGLVC 445
Query: 396 NNSYETYIRG-------------IEADIFIKRDGVPYV--GQVWEGPLN----------- 429
+ ++R E ++ K D + G +GP +
Sbjct: 446 QTNITCFLRNDNEGQDYEVNQTLRERQLYTKNDSLTGTDFGMTDDGPSDAYIGHLDYGGG 505
Query: 430 ------FPDFVNPATQTFWENEIKLFRDILPLDGLWLDM-------NEISNFIT-SPPTP 475
FPD+ P +W N K I LD +W DM ++I + I P
Sbjct: 506 VECDALFPDWGRPDVAEWWGNNYKKLFSI-GLDFVWQDMTVPAMMPHKIGDDINVKPDGN 564
Query: 476 FSTLDDPPYKINNNGTRRPINNKTIPATALHYGN------VTEYNVHSLYGLLEAKATRA 529
+ DDP N T P + T + Y N VT+ N+H+ Y L E+
Sbjct: 565 WPNADDPSNGQYNWKTYHP----QVLVTDMRYENHGREPMVTQRNIHA-YTLCESTRKEG 619
Query: 530 ALINAVG----KRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPM 585
+ NA +R ++++R ++ + + W GDN+ T + + I + +N + +P+
Sbjct: 620 IVENADTLTKFRRSYIISRGGYIGNQHFGGMWVGDNSTTSNYIQMMIANNINMNMSCLPL 679
Query: 586 VGADICGF-------QRN-TTEELCRRWIQLGAFYPFARDHSDKF-------KIRQELYL 630
VG+DI GF QR T +L R++Q G P+ R+H D++ K QELY+
Sbjct: 680 VGSDIGGFTSYDNENQRTPCTGDLMVRYVQAGCLLPWFRNHYDRWIESKDHGKDYQELYM 739
Query: 631 WDSVAATARKVLGLRYRLLPYFYTLMYEAHTKGTPIARPL-FFSFPQDARTYEISTQFLI 689
+ + T RK + RYR YT MY+ G PI + ++ + R + + FL+
Sbjct: 740 YPNEMDTLRKFVEFRYRWQEVLYTAMYQNAAFGKPIIKAASMYNNDSNVRRAQ-NDHFLL 798
Query: 690 GKG----VIVSPVLRSGAVSVDAYFPG-GNWF----DLXXXXXXXXXXXGKQI-TLDAPP 739
G ++ +PV+ + + Y P W+ D G +I P
Sbjct: 799 GGHDGYRILCAPVVWENSTERELYLPVLTQWYKFGPDFDTKPLEGAMNGGDRIYNYPVPQ 858
Query: 740 DHINVHVREGNIL----ALQGEAMTTDA-ARKTPFQLLVVVSNTEDSTGDVFLXXXXXXX 794
+ VREG IL L GE + + + P V + G +L
Sbjct: 859 SESPIFVREGAILPTRYTLNGENKSLNTYTDEDPLVFEVFPLGNNRADGMCYLDDGGVTT 918
Query: 795 XXXXXXKWSLVRFYA 809
K+S+V+ A
Sbjct: 919 NAEDNGKFSVVKVAA 933
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 17/75 (22%)
Query: 279 GGIIDLYFFAGPSPDSVIQQYTEFI-GRPAPMPYWSFGF--HQCRYGYKNVSDLEAVVAG 335
G + +++++G D VI + EFI RP P + SFGF H+C G
Sbjct: 333 GDKVVMWYYSGNRDDEVIDRPEEFIIDRPRPRQHLSFGFGIHRC--------------VG 378
Query: 336 YAKAVIPLEVMWTDI 350
A + L ++W +I
Sbjct: 379 NRLAEMQLRILWEEI 393
>pdb|1WW1|A Chain A, Crystal Structure Of Trnase Z From Thermotoga Maritima
pdb|1WW1|B Chain B, Crystal Structure Of Trnase Z From Thermotoga Maritima
pdb|2E7Y|A Chain A, High Resolution Structure Of T. Maritima Trnase Z
pdb|2E7Y|B Chain B, High Resolution Structure Of T. Maritima Trnase Z
Length = 280
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 14/68 (20%)
Query: 255 GVLLLNSNGMDVVYTGDRITYKVIGGIIDLYFFAGPSPDSVIQQYTEFIGRPAPMPYWSF 314
GV+ + +NGM GDR +D+++ P + +++YTEFI R P +SF
Sbjct: 59 GVVNIRNNGM-----GDR------EKPLDVFY---PEGNRAVEEYTEFIKRANPDLRFSF 104
Query: 315 GFHQCRYG 322
H + G
Sbjct: 105 NVHPLKEG 112
>pdb|2W2S|A Chain A, Structure Of The Lagos Bat Virus Matrix Protein
Length = 202
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 244 IDVRSPNGTTHGVLLLNSNGMDVVYTGDRITYKVIGGIIDLYFFAGPSPDSV 295
I + SPNG + +L D VY+G+R V+ +I L A P P+ +
Sbjct: 59 IKICSPNGYSFRILRHILKSFDNVYSGNRRLIGVVKVVIGLVLSASPVPEGM 110
>pdb|3OZX|A Chain A, Crystal Structure Of Abce1 Of Sulfolubus Solfataricus
(-Fes Domain)
pdb|3OZX|B Chain B, Crystal Structure Of Abce1 Of Sulfolubus Solfataricus
(-Fes Domain)
Length = 538
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 79/201 (39%), Gaps = 28/201 (13%)
Query: 155 SVSRRSSGETLFDTSPEGSNADTFLVFKDQYIQLSSALPKGSAH--LYGLGEHTKK-SLK 211
V +R G+ +++ E + + +V K QY++ +S KG+ + L + E KK +K
Sbjct: 64 EVLKRFRGKEIYNYFKELYSNELKIVHKIQYVEYASKFLKGTVNEILTKIDERGKKDEVK 123
Query: 212 LTPNSNDTLTLWNAD------------LFAAYL----DVNLYGSHPFYIDVRSPNGTTHG 255
N + LWN D L AA L DV ++ Y+DVR
Sbjct: 124 ELLNMTN---LWNKDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKA 180
Query: 256 VLLLNSNGMDVVYTGDRITYKVIGGIIDLYFFAGPSPDSVIQQYTEFIG----RPAPMPY 311
+ L N +V D I + +I + + V + Y +G +P
Sbjct: 181 IRELLKNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLKGYLPA 240
Query: 312 WSFGFH--QCRYGYKNVSDLE 330
+ + ++ K VSDL+
Sbjct: 241 ENMKIRPDEIKFMLKEVSDLD 261
>pdb|3DL8|G Chain G, Structure Of The Complex Of Aquifex Aeolicus Secyeg And
Bacillus Subtilis Seca
pdb|3DL8|H Chain H, Structure Of The Complex Of Aquifex Aeolicus Secyeg And
Bacillus Subtilis Seca
Length = 429
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 256 VLLLNSNGMDVVYTGDRITYKVIGGIIDLYFFAGPS---PDSVIQQYTE 301
VL L + M +V+ DRIT K IG L FAG P++VIQ Y +
Sbjct: 159 VLTLVAGTMFLVWIADRITEKGIGNGASLIIFAGIVANFPNAVIQFYEK 207
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,370,236
Number of Sequences: 62578
Number of extensions: 1204869
Number of successful extensions: 2348
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2233
Number of HSP's gapped (non-prelim): 31
length of query: 903
length of database: 14,973,337
effective HSP length: 108
effective length of query: 795
effective length of database: 8,214,913
effective search space: 6530855835
effective search space used: 6530855835
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)