Query 038998
Match_columns 903
No_of_seqs 342 out of 2164
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 05:21:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/038998.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/038998hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1066 Glucosidase II catalyt 100.0 5E-173 1E-177 1443.3 60.6 814 28-899 31-914 (915)
2 KOG1065 Maltase glucoamylase a 100.0 3E-158 6E-163 1372.3 57.2 730 39-863 52-786 (805)
3 PLN02763 hydrolase, hydrolyzin 100.0 3E-143 7E-148 1291.7 66.9 605 182-841 60-680 (978)
4 COG1501 Alpha-glucosidases, fa 100.0 4E-132 9E-137 1190.2 66.6 583 183-819 140-734 (772)
5 PRK10658 putative alpha-glucos 100.0 3E-129 6E-134 1159.1 63.7 596 83-749 51-665 (665)
6 PRK10426 alpha-glucosidase; Pr 100.0 7E-120 2E-124 1076.0 55.9 519 182-757 68-628 (635)
7 PF01055 Glyco_hydro_31: Glyco 100.0 5E-110 1E-114 966.0 39.4 437 285-752 1-441 (441)
8 cd06602 GH31_MGAM_SI_GAA This 100.0 6.7E-92 1.5E-96 783.9 31.9 334 304-681 1-339 (339)
9 cd06603 GH31_GANC_GANAB_alpha 100.0 1.9E-88 4E-93 758.0 31.1 333 304-663 1-339 (339)
10 cd06600 GH31_MGAM-like This fa 100.0 3.1E-88 6.8E-93 748.8 30.3 314 304-663 1-317 (317)
11 cd06604 GH31_glucosidase_II_Ma 100.0 8.5E-88 1.8E-92 753.0 31.6 333 304-663 1-339 (339)
12 cd06601 GH31_lyase_GLase GLase 100.0 2.6E-82 5.6E-87 701.6 25.6 292 304-646 1-332 (332)
13 cd06598 GH31_transferase_CtsZ 100.0 4.9E-78 1.1E-82 667.9 27.6 304 304-646 1-317 (317)
14 cd06593 GH31_xylosidase_YicI Y 100.0 4.3E-77 9.4E-82 659.1 28.2 303 304-648 1-308 (308)
15 cd06591 GH31_xylosidase_XylS X 100.0 1.1E-75 2.4E-80 649.5 27.5 301 304-637 1-317 (319)
16 cd06599 GH31_glycosidase_Aec37 100.0 2.8E-75 6.1E-80 645.8 25.3 303 304-639 1-317 (317)
17 cd06597 GH31_transferase_CtsY 100.0 8.7E-75 1.9E-79 646.2 25.3 294 304-633 1-328 (340)
18 cd06594 GH31_glucosidase_YihQ 100.0 8.7E-74 1.9E-78 632.8 26.8 291 304-633 1-310 (317)
19 cd06595 GH31_xylosidase_XylS-l 100.0 1.4E-70 3E-75 601.6 23.2 278 303-637 1-290 (292)
20 cd06589 GH31 The enzymes of gl 100.0 4.6E-66 1E-70 559.1 22.1 260 304-639 1-265 (265)
21 cd06592 GH31_glucosidase_KIAA1 100.0 3.3E-59 7.2E-64 514.4 22.2 278 307-639 12-303 (303)
22 cd06596 GH31_CPE1046 CPE1046 i 100.0 1.5E-47 3.2E-52 400.6 16.8 239 304-653 1-261 (261)
23 PF02065 Melibiase: Melibiase; 99.3 4E-11 8.6E-16 136.3 16.3 167 288-465 12-194 (394)
24 PF13802 Gal_mutarotas_2: Gala 99.2 1.6E-11 3.4E-16 105.5 6.8 65 196-266 1-67 (68)
25 COG3345 GalA Alpha-galactosida 98.7 4.7E-07 1E-11 103.0 16.3 300 287-652 262-589 (687)
26 PLN03231 putative alpha-galact 98.3 1.6E-05 3.5E-10 89.2 17.4 131 325-462 16-184 (357)
27 PLN02229 alpha-galactosidase 98.2 2E-05 4.3E-10 90.0 15.3 88 303-395 57-154 (427)
28 PLN02692 alpha-galactosidase 98.2 3.6E-05 7.7E-10 87.6 17.0 129 294-463 41-179 (412)
29 PLN02899 alpha-galactosidase 98.2 5.6E-05 1.2E-09 88.8 18.0 192 325-574 46-285 (633)
30 PLN02808 alpha-galactosidase 98.1 7.8E-05 1.7E-09 84.6 16.8 120 303-463 26-155 (386)
31 PLN02355 probable galactinol-- 97.1 0.018 3.9E-07 69.7 18.1 108 280-388 160-313 (758)
32 PLN02219 probable galactinol-- 97.1 0.015 3.2E-07 70.3 17.2 106 282-388 158-305 (775)
33 PLN02684 Probable galactinol-- 96.1 0.17 3.7E-06 61.4 16.9 104 284-388 163-304 (750)
34 PF14871 GHL6: Hypothetical gl 96.0 0.028 6E-07 54.9 8.2 122 329-462 2-132 (132)
35 PLN02711 Probable galactinol-- 95.9 0.68 1.5E-05 56.5 20.6 104 284-388 174-326 (777)
36 PF02638 DUF187: Glycosyl hydr 94.7 0.4 8.6E-06 53.7 13.3 132 325-461 17-161 (311)
37 TIGR02456 treS_nterm trehalose 93.9 1.1 2.4E-05 54.1 15.5 134 324-463 25-199 (539)
38 PRK10785 maltodextrin glucosid 93.4 1.5 3.2E-05 53.7 15.5 132 324-463 176-337 (598)
39 PRK14510 putative bifunctional 93.3 0.48 1E-05 62.2 11.9 96 367-463 245-344 (1221)
40 TIGR01515 branching_enzym alph 93.2 0.83 1.8E-05 56.0 13.0 123 332-462 162-296 (613)
41 PF05691 Raffinose_syn: Raffin 92.7 2.2 4.8E-05 52.5 15.4 105 283-388 155-309 (747)
42 PRK10933 trehalose-6-phosphate 92.4 2.2 4.7E-05 51.7 15.0 134 324-463 30-202 (551)
43 PLN00196 alpha-amylase; Provis 92.3 3 6.6E-05 48.8 15.5 136 326-463 43-205 (428)
44 PLN02960 alpha-amylase 92.3 1.2 2.6E-05 55.7 12.6 132 324-463 413-558 (897)
45 TIGR02402 trehalose_TreZ malto 91.8 1.1 2.4E-05 54.0 11.5 82 369-463 160-246 (542)
46 TIGR02403 trehalose_treC alpha 91.8 2.9 6.3E-05 50.5 15.0 136 324-464 24-196 (543)
47 TIGR02104 pulA_typeI pullulana 91.6 1.2 2.6E-05 54.5 11.7 90 369-463 229-321 (605)
48 PF13199 Glyco_hydro_66: Glyco 91.3 0.51 1.1E-05 56.7 7.8 133 324-462 115-266 (559)
49 PF13200 DUF4015: Putative gly 91.2 2.5 5.4E-05 47.4 12.5 126 318-462 4-145 (316)
50 PRK12313 glycogen branching en 91.1 1.7 3.7E-05 53.5 12.4 123 332-463 176-311 (633)
51 PLN02447 1,4-alpha-glucan-bran 90.7 0.98 2.1E-05 56.1 9.6 132 325-464 248-393 (758)
52 PF00128 Alpha-amylase: Alpha 90.5 1.2 2.6E-05 48.6 9.4 131 327-463 4-170 (316)
53 COG1649 Uncharacterized protei 90.4 1.4 3E-05 50.9 9.9 134 324-461 61-206 (418)
54 PRK03705 glycogen debranching 89.9 0.96 2.1E-05 55.7 8.7 89 370-462 243-337 (658)
55 TIGR02100 glgX_debranch glycog 89.8 0.91 2E-05 56.3 8.4 94 369-463 245-343 (688)
56 PLN02361 alpha-amylase 88.9 4.7 0.0001 46.8 12.8 130 327-463 29-181 (401)
57 PRK05402 glycogen branching en 88.5 4.3 9.3E-05 50.9 13.1 130 325-463 263-406 (726)
58 PRK09505 malS alpha-amylase; R 88.5 3.9 8.4E-05 50.7 12.4 64 324-389 227-312 (683)
59 PLN03244 alpha-amylase; Provis 88.4 0.99 2.1E-05 55.6 7.1 90 370-463 442-533 (872)
60 PRK12568 glycogen branching en 87.1 4.2 9.2E-05 50.5 11.6 126 330-463 273-410 (730)
61 COG1523 PulA Type II secretory 87.1 1.7 3.6E-05 53.6 8.1 91 370-463 266-361 (697)
62 PLN02784 alpha-amylase 87.1 5.1 0.00011 50.2 12.1 134 327-463 521-675 (894)
63 TIGR02103 pullul_strch alpha-1 87.0 1.3 2.9E-05 56.0 7.3 88 370-462 405-497 (898)
64 KOG1065 Maltase glucoamylase a 86.9 0.21 4.6E-06 61.1 0.4 167 522-697 471-638 (805)
65 TIGR01370 cysRS possible cyste 86.8 1.9 4.2E-05 48.2 7.7 102 342-463 64-169 (315)
66 PRK09441 cytoplasmic alpha-amy 86.7 4.3 9.3E-05 48.3 11.2 32 432-463 204-235 (479)
67 TIGR02102 pullulan_Gpos pullul 85.6 2.2 4.7E-05 55.3 8.3 87 369-463 555-644 (1111)
68 KOG2366 Alpha-D-galactosidase 85.3 5.4 0.00012 45.1 10.0 66 326-392 59-131 (414)
69 PRK14705 glycogen branching en 84.9 6.5 0.00014 51.6 12.1 127 329-463 768-906 (1224)
70 KOG0471 Alpha-amylase [Carbohy 83.9 3.8 8.2E-05 49.5 9.0 125 340-464 51-216 (545)
71 KOG0470 1,4-alpha-glucan branc 81.7 2.8 6E-05 51.1 6.5 90 370-463 312-404 (757)
72 PRK14706 glycogen branching en 81.0 3.9 8.5E-05 50.3 7.7 89 369-463 217-308 (639)
73 COG0366 AmyA Glycosidases [Car 80.8 28 0.0006 41.1 14.7 133 324-462 26-199 (505)
74 COG0296 GlgB 1,4-alpha-glucan 80.2 17 0.00036 44.5 12.4 129 325-463 163-305 (628)
75 COG2342 Predicted extracellula 78.2 17 0.00037 39.7 10.4 107 340-465 41-150 (300)
76 PLN02877 alpha-amylase/limit d 69.2 16 0.00035 46.8 8.8 89 370-463 467-561 (970)
77 PRK15447 putative protease; Pr 67.1 16 0.00035 40.7 7.5 115 327-460 15-137 (301)
78 smart00642 Aamy Alpha-amylase 57.4 35 0.00076 34.6 7.3 66 324-391 16-92 (166)
79 PF02449 Glyco_hydro_42: Beta- 56.0 34 0.00073 39.3 7.8 124 325-467 8-140 (374)
80 PF01120 Alpha_L_fucos: Alpha- 55.8 85 0.0018 35.8 10.8 120 326-465 90-217 (346)
81 cd06416 GH25_Lys1-like Lys-1 i 55.4 22 0.00048 36.8 5.6 74 316-392 58-133 (196)
82 PF14885 GHL15: Hypothetical g 53.8 22 0.00048 31.7 4.4 54 408-463 19-76 (79)
83 PF10566 Glyco_hydro_97: Glyco 37.2 85 0.0018 34.6 6.8 65 325-391 30-95 (273)
84 PRK13840 sucrose phosphorylase 37.0 6.8E+02 0.015 30.2 14.6 32 431-463 164-195 (495)
85 cd02742 GH20_hexosaminidase Be 36.5 2.9E+02 0.0064 30.7 11.1 123 318-451 8-145 (303)
86 COG0826 Collagenase and relate 32.0 2.7E+02 0.0059 31.8 10.0 98 343-444 27-135 (347)
87 PRK15063 isocitrate lyase; Pro 31.6 1.1E+02 0.0025 35.7 6.9 65 322-393 286-350 (428)
88 PF07611 DUF1574: Protein of u 31.2 96 0.0021 35.4 6.1 76 356-468 241-316 (345)
89 cd06565 GH20_GcnA-like Glycosy 30.1 8E+02 0.017 27.3 14.0 123 318-454 8-131 (301)
90 PRK14582 pgaB outer membrane N 27.5 4.5E+02 0.0096 32.9 11.4 123 326-461 333-465 (671)
91 PTZ00445 p36-lilke protein; Pr 26.9 2E+02 0.0043 30.7 7.0 62 326-389 28-98 (219)
92 PRK14511 maltooligosyl trehalo 26.2 3.2E+02 0.007 35.1 10.0 68 325-395 18-96 (879)
93 TIGR02401 trehalose_TreY malto 25.8 3.2E+02 0.007 34.9 9.9 80 325-407 14-105 (825)
94 PF01301 Glyco_hydro_35: Glyco 25.4 86 0.0019 35.3 4.5 68 326-397 23-91 (319)
95 cd06415 GH25_Cpl1-like Cpl-1 l 25.1 1.1E+02 0.0025 31.6 5.1 70 316-391 57-130 (196)
96 PF12138 Spherulin4: Spherulat 24.0 1.6E+02 0.0035 32.0 6.1 79 311-399 68-157 (253)
97 smart00632 Aamy_C Aamy_C domai 23.8 3.4E+02 0.0075 23.8 7.2 60 686-747 10-79 (81)
98 PF01373 Glyco_hydro_14: Glyco 22.3 1.8E+02 0.004 33.8 6.3 91 327-428 16-125 (402)
99 PF02419 PsbL: PsbL protein; 22.2 83 0.0018 23.7 2.3 16 11-26 21-36 (37)
100 PF00331 Glyco_hydro_10: Glyco 21.7 1.4E+02 0.0031 33.5 5.4 52 326-387 187-238 (320)
101 PF00728 Glyco_hydro_20: Glyco 21.0 2.3E+02 0.005 31.8 6.9 131 318-454 10-156 (351)
102 smart00812 Alpha_L_fucos Alpha 20.9 5.9E+02 0.013 29.6 10.2 110 328-463 82-202 (384)
103 cd06542 GH18_EndoS-like Endo-b 20.9 2.8E+02 0.006 29.8 7.2 68 366-465 48-115 (255)
104 cd06564 GH20_DspB_LnbB-like Gl 20.2 1.1E+03 0.024 26.3 12.2 120 319-452 10-153 (326)
No 1
>KOG1066 consensus Glucosidase II catalytic (alpha) subunit and related enzymes, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.5e-173 Score=1443.32 Aligned_cols=814 Identities=29% Similarity=0.549 Sum_probs=694.6
Q ss_pred hcccccc--cccccCCCCCCCCeEEEeccCeeEecCCCeEEEEEEeecCCCCCCCCceeEEEEEEEeeCCEEEEEEEcCC
Q 038998 28 LDSCSVS--VAAAKDQEPVGYGYSILSSSSATVDTSLKSLTADLSLIKNSSVYGPDIYNLNLFASLETKDRLRVRLTDSN 105 (903)
Q Consensus 28 ~~~~~~~--~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~di~~l~~~v~~~~~~~lrv~i~d~~ 105 (903)
+.+|-++ |--++.-.+.-++|++. ..++.. ...+++|.|....+.. .|.|+++.+.++.+|++|++.+
T Consensus 31 FKtCeQs~FCkR~R~i~~~~~~y~l~-~~si~~--~~~~l~a~l~~~~~~~-------~l~~sl~~Lkd~~vR~~IDE~~ 100 (915)
T KOG1066|consen 31 FKTCEQSGFCKRHRAITPSLTGYELL-ADSITH--YEDVLTANLINKQNKV-------LLPLSLSGLKDSTVRFQIDEKE 100 (915)
T ss_pred cccccccchhhhhhhhcCCCCceeee-ccccee--cCCceEEeeeecCCCc-------eeeEEEEEecCceEEEEECCcc
Confidence 3467666 33233335556799998 345655 4569999986543321 7899999999999999999765
Q ss_pred ---CCcccCCccccCCCCCCCCCCCC-CCCcceeeecCccEEEEEEecCCeEEEEEEccCCcEEeecCC-----------
Q 038998 106 ---NQRWEIPQEIIPRQFHPTGHNRS-LPENHFLSDATSDLVFTLHNTTPFGFSVSRRSSGETLFDTSP----------- 170 (903)
Q Consensus 106 ---~~r~~vp~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~pf~~~v~r~~~~~~l~~t~~----------- 170 (903)
++||++|+.+...+.....+... ..+...+...+.++++.++ .+||.+.+.++..-.+..|...
T Consensus 101 ~~~rkRy~~~~~lv~~~~~~~~~~~~~~~t~~~~~~~~g~~~vvv~-~~PF~v~~~~~~~lv~svN~~~~L~fE~~r~K~ 179 (915)
T KOG1066|consen 101 SALRKRYQVPDALVSEPEEVRISVSKNDETATKIVGTNGKYKVVVT-AKPFRVDFFEDDELVVSVNARGLLNFEHFRTKE 179 (915)
T ss_pred cccccccCCchhhcCcchheeEEeeecCCcccEEEEecCCeEEEEE-eCCeEEEEEeCCcEEEEEcccceeehhhccccc
Confidence 68999999887655432211111 1122334455667999996 9999999998743344444432
Q ss_pred -CCCC-------CCceeeeec------ceEEEEeeCCCCCCceEecCcccCCCCccCCC--CCceEEEeecccccc--cc
Q 038998 171 -EGSN-------ADTFLVFKD------QYIQLSSALPKGSAHLYGLGEHTKKSLKLTPN--SNDTLTLWNADLFAA--YL 232 (903)
Q Consensus 171 -~~~~-------~~~~l~f~d------q~~~~~~~lp~~~~~~YGlGE~~~~~~~l~~~--~~~~~~l~n~D~~~~--~~ 232 (903)
++.+ ++.+..+.| +-+.+.++++ +..++||++||+. +|+|+.. ..++|||||.|++++ +.
T Consensus 180 ~~~~e~~~~g~WeE~Fk~~~DskP~Gp~SVglD~sF~-~~~~vyGIPEHA~-s~~Lk~T~g~~ePYRLyNlDVFEYe~~s 257 (915)
T KOG1066|consen 180 EGPEETDENGFWEETFKTHHDSKPHGPESVGLDFSFV-GSKNVYGIPEHAD-SLRLKDTSGGSEPYRLYNLDVFEYELNS 257 (915)
T ss_pred cCccccccccchhhhhhcccCCCCCCCceeEEeEEec-ccceeecCccccc-ceEeeccCCCCCceeEeecceEEEecCC
Confidence 0111 112222333 2367788888 5899999999996 6999873 358999999999976 45
Q ss_pred CCCCccccceEEEecCCCCceEEEEeecCCCceeeeeC----------------------CeEEEEEEcCEEEEEEEeCC
Q 038998 233 DVNLYGSHPFYIDVRSPNGTTHGVLLLNSNGMDVVYTG----------------------DRITYKVIGGIIDLYFFAGP 290 (903)
Q Consensus 233 ~~~lYgs~Pf~~~~~~~~g~~~Gvf~~Ns~~~dv~~~~----------------------~~~~~~~~gG~lD~y~f~G~ 290 (903)
.+.||||+||+++++. ....|+||+|+.++.|+++. ....|.+|.|++|.+||+||
T Consensus 258 pmalYGSIP~m~ah~~--~r~~g~fW~NAAeTWVDi~~~t~~~~~s~~~~~~~~s~~~p~~~thw~SEsGiiDvFi~lGP 335 (915)
T KOG1066|consen 258 PMALYGSIPFMLAHGP--NRDVGIFWLNAAETWVDIQSSTTDGLFSKMVDPVSGSQKVPQTDTHWMSESGIIDVFIFLGP 335 (915)
T ss_pred cchheecccEEEecCC--CCceeeEEecchhheEEeeccccccccccccccCCCCCCCCCccceeeccCCcEEEEEEeCC
Confidence 5889999999999886 46789999999997665431 13579999999999999999
Q ss_pred CHHHHHHHHHHHhCCCCCCCCcccccceeeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccCCCCccccCCCCCChhH
Q 038998 291 SPDSVIQQYTEFIGRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDPINFPADQ 370 (903)
Q Consensus 291 ~p~~vi~qY~~ltG~p~lpP~WalG~~qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dFt~d~~~FP~~~ 370 (903)
+|.+|++||++|||+|+|||.+|+|||||||+|+++++|.+|-++|.+++||+|+|||||+|.+++++||||+.+||+|
T Consensus 336 ~~~Dv~~qyaaLTG~~~LPplFsiGYHQcRWNY~DE~DV~~Vd~~FDehdiP~DviWLDIEhtdgKrYFTWDk~~FP~P- 414 (915)
T KOG1066|consen 336 KPSDVFRQYAALTGTTPLPPLFSIGYHQCRWNYNDEEDVLTVDQGFDEHDIPYDVIWLDIEHTDGKRYFTWDKHKFPNP- 414 (915)
T ss_pred ChhHHHHHHHhhcCCCCCCchhhcchhhccccccchhhhhhhhcCccccCCccceEEEeeeecCCceeEeeccccCCCH-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHcCceEEEEecCCCCCCCChHHHHHhHhCCeeeecC-CcCeeeeeeCCCccccCCCChHHHHHHHHHHH--
Q 038998 371 MKKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRD-GVPYVGQVWEGPLNFPDFVNPATQTFWENEIK-- 447 (903)
Q Consensus 371 l~~~v~~L~~~G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~-g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~-- 447 (903)
++|+++|.++|+|+|+||||||+.+++|..++++++++++||+. |++|.|.||||.+.|+||.||++|+||++++.
T Consensus 415 -~~Ml~kLa~kgRklV~IvDPHIKkD~~Y~v~ke~~~~gy~VKd~~G~DyeG~CWPG~S~yiDf~nP~~r~wW~~~fafd 493 (915)
T KOG1066|consen 415 -KDMLKKLASKGRKLVTIVDPHIKKDDGYFVHKEAKDKGYYVKDRDGSDYEGWCWPGSSSYIDFINPEARKWWKSQFAFD 493 (915)
T ss_pred -HHHHHHHHhcCCceEEEeCcccccCCCeEEhHHhhhCCeEEEecCCCcccccccCCCcccccccCHHHHHHHhhhcccc
Confidence 89999999999999999999999999999999999999999986 99999999999999999999999999999875
Q ss_pred HHhccCCCceEEeeccccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhhHHHHH
Q 038998 448 LFRDILPLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKAT 527 (903)
Q Consensus 448 ~~~~~~g~dg~W~DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at 527 (903)
++......-.+|+||||||+|++ + +.||+.|++|+||++|+++||+||++...||
T Consensus 494 ~y~g~t~nl~iWNDMNEPSVFnG-P------------------------EiTm~kDaiHyGg~EHRdVHNiYG~~~h~aT 548 (915)
T KOG1066|consen 494 RYEGSTPNLFIWNDMNEPSVFNG-P------------------------EITMPKDAIHYGGWEHRDVHNIYGLMVHMAT 548 (915)
T ss_pred cccCCCCceEEeccCCCccccCC-C------------------------ccccchhhhhcCCeeechhhhhhceeeeehh
Confidence 33334555689999999999964 1 6789999999999999999999999999999
Q ss_pred HHHHHHHh--CCCCEEEecccccCCCCcccccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCCCCChHHHHHH
Q 038998 528 RAALINAV--GKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRNTTEELCRRW 605 (903)
Q Consensus 528 ~~al~~~~--~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~EL~~RW 605 (903)
++||+++. .+||||||||+|+||||+||.|+|||.++|+|||.||||+|+.|++|+||+|||||||+|||++||++||
T Consensus 549 ~dGl~~R~~g~~RPFvLsRafFaGsQR~aAiWTGDN~A~W~HLkiSiPM~Lsl~iaG~~F~GADVgGFFgNPd~ELlvRW 628 (915)
T KOG1066|consen 549 FDGLIARSGGKERPFVLSRAFFAGSQRTAAIWTGDNTADWDHLKISIPMVLSLGIAGMPFVGADVGGFFGNPDPELLVRW 628 (915)
T ss_pred hhhhhhhcCCCcCceEEEeccccCccceeeeeccCCccchhhheeecceeEecccccceecccccccccCCCCHHHHHHH
Confidence 99999886 4799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccccccccCCCCCCCccccCch-HHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCcccccCCCCCCCCccccccC
Q 038998 606 IQLGAFYPFARDHSDKFKIRQELYLWD-SVAATARKVLGLRYRLLPYFYTLMYEAHTKGTPIARPLFFSFPQDARTYEIS 684 (903)
Q Consensus 606 ~QlgaF~Pf~R~H~~~~~~~qePw~~~-~~~~~~r~~i~lRY~LLPYlYtl~~~a~~~G~Pv~RPL~~efP~D~~~~~i~ 684 (903)
||.|||+||||.|+++++++||||+|+ ...+++|++|++||+||||+||+|++++.+|.|||||||+|||+|.+++.+|
T Consensus 629 YQ~gaf~PFFRaHAHiDTkRREPWLf~e~~~~iiRdal~~RY~lLP~wYTlFye~~~tG~PvmrPl~~e~peD~~~f~iD 708 (915)
T KOG1066|consen 629 YQTGAFQPFFRAHAHIDTKRREPWLFPEQTTQIIRDALRTRYALLPYWYTLFYEHHVTGVPVMRPLFMEFPEDEELFEID 708 (915)
T ss_pred HHhcccchhhhhhccccccccCccccCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccchhHhhCccchhhhccc
Confidence 999999999999999999999999999 5679999999999999999999999999999999999999999999999999
Q ss_pred ceeeecCcceEeeeecCCceEEEEEcCCC---eeeeeccCceeeeecCCeEEEEeCCCCceeEEeeCCeEEeccCC-Ccc
Q 038998 685 TQFLIGKGVIVSPVLRSGAVSVDAYFPGG---NWFDLFNFSNSVSVSSGKQITLDAPPDHINVHVREGNILALQGE-AMT 760 (903)
Q Consensus 685 ~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G---~Wyd~~tg~~~~~~~gG~~v~~~apld~iPvfvR~GsIIP~~~~-~~~ 760 (903)
+|||+|+.|||.||+++|...++||||+| .|||+.+++.+ .|++++.++||+++||||+|||+|||+.+. +++
T Consensus 709 ~Q~~vgsgLLVkPV~e~g~~~v~vylP~g~~evwyd~~s~~~~---~g~g~~~vpapl~~iPv~qrGGtIip~~~r~RRs 785 (915)
T KOG1066|consen 709 DQFMVGSGLLVKPVTEKGTSEVQVYLPRGKGEVWYDWVSGQEY---RGPGTVYVPAPLTSIPVFQRGGTIIPTKDRIRRS 785 (915)
T ss_pred ceEEEccccEEeecccCCcceeEEEcCCCCccEEEEcccCcee---cCCCcEEecCcccccceeeeCceecchHHHHHHh
Confidence 99999999999999999999999999987 79999999876 456689999999999999999999999988 567
Q ss_pred cccccCCceEEEEEeCCCCceEEEEEeeCCcceeecccCCeEEEEEEEEEEecCEE-EEEEEEe--cccccCCcceEEEE
Q 038998 761 TDAARKTPFQLLVVVSNTEDSTGDVFLDDGEEVEMGDVGGKWSLVRFYAGIINNNV-TIRSQVV--NRDFALSQKWIIDK 837 (903)
Q Consensus 761 t~~~~~~~~~l~v~~~~~g~A~G~ly~DDG~s~~~~~~~g~~~~~~f~~~~~~~~~-~~~~~~~--~~~y~~~~~~~~~~ 837 (903)
+.+++++|++|+||++.+|.|+|+||+|||+|++| ++|+|.+.+|+++++.... +++.... +|+|. ....|++
T Consensus 786 s~lm~~DP~tL~IAl~~~~~A~G~lYlDDG~tf~Y--q~G~~~~~~F~f~~~~~~~~~l~~~~l~p~~~~~--~~~~Ier 861 (915)
T KOG1066|consen 786 SELMKNDPITLFIALDSQGNANGELYLDDGETFNY--QRGQYVHRRFSFSNNSLNSASLVNENLDPEGKYA--TKNWIER 861 (915)
T ss_pred HHhhccCCeEEEEEeCCCCcccceEEecCCccccc--ccccEEEEEEEeccCccccceecCCCCCcccccc--cccceEE
Confidence 78999999999999999999999999999999999 5799999999999853221 2222222 35564 3567999
Q ss_pred EEEEeccccCCccceEEEECCeeeeecccceeeeEEcCCcceEEEEEccCceeeCCceEEEE
Q 038998 838 VTFIGLKKFKRLKGYKLSTTRESEFTKNSSVIKESVNSITGFLTIEISELSLLIGQEFKLEL 899 (903)
Q Consensus 838 i~i~g~~~~~~~~~~~v~~ng~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~i~~ 899 (903)
|+|.|.++.| +...++.+|.+...+ ....+.++. +++|++|++.+.++|+|++
T Consensus 862 IvI~G~~~~p--~~~~i~~~~~~~~~~-----~~~~d~~~~--~l~IrkPg~~v~~d~~v~i 914 (915)
T KOG1066|consen 862 IVIRGAESSP--KIALITRIGSPVQSL-----EFSHDHDTK--VLVIRKPGAFVTSDWKVHI 914 (915)
T ss_pred EEEeccccCC--cceEEeecCCCchhc-----eecccCCCc--eEEEecCCceeeeeeEEEe
Confidence 9999998754 667777888766543 223444444 8999999999999999976
No 2
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-158 Score=1372.29 Aligned_cols=730 Identities=50% Similarity=0.885 Sum_probs=658.7
Q ss_pred cCCCCCCCCeEEEeccCeeEecCCCeEEEEEEee-cCCCCCCCCceeEEEEEEEeeCCEEEEEEEcCCCCcccCCccccC
Q 038998 39 KDQEPVGYGYSILSSSSATVDTSLKSLTADLSLI-KNSSVYGPDIYNLNLFASLETKDRLRVRLTDSNNQRWEIPQEIIP 117 (903)
Q Consensus 39 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~g~di~~l~~~v~~~~~~~lrv~i~d~~~~r~~vp~~~~~ 117 (903)
.+.-+.|.||.+. +.+.. .+|++|.|++. ..+..||.|++.+.+.+.+++.+++||+|+|.++.|||+|...++
T Consensus 52 ~~~~~~g~gY~~~---~~~~~--t~~~~a~l~~~~~~~~~~~~d~~~~~l~~~~~T~~r~~i~i~d~~~~r~e~p~~~~~ 126 (805)
T KOG1065|consen 52 WCRFLIGYGYQAE---SMQVS--TSGQTAKLNNLDPSNPIYGTDIKSLLLTVSYETVERLHIKITDLNNQRWEVPHVTIR 126 (805)
T ss_pred eEEeecCCceEEE---ecccc--cceEEEEeeccCCCcccccCCccceEeeeecccceeeEEeecCcCCCceeccccccc
Confidence 3446678999999 66553 44999999988 458899999999999999999999999999999999999998766
Q ss_pred CCCCCCCCCCCCCCcceeeecCccEEEEEEecCCeEEEEEEccCCcEEeecCCCCCCCCceeeeecceEEEEeeCCCCCC
Q 038998 118 RQFHPTGHNRSLPENHFLSDATSDLVFTLHNTTPFGFSVSRRSSGETLFDTSPEGSNADTFLVFKDQYIQLSSALPKGSA 197 (903)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pf~~~v~r~~~~~~l~~t~~~~~~~~~~l~f~dq~~~~~~~lp~~~~ 197 (903)
+.... +..+. +.. +.+||+|.|.|+++|+++|||+.++ |+|+|||||+++.||+ +.
T Consensus 127 ~~~~~-------------s~~~~---~~~-s~~pF~f~v~R~s~g~~lfdTs~~~------liF~DQflqlsT~LPs-~~ 182 (805)
T KOG1065|consen 127 RVEGR-------------SHNSP---VSF-STGPFSFSVTRWSDGRVLFDTSIGP------LIFEDQFLQLSTYLPS-EN 182 (805)
T ss_pred ceecc-------------ccCCC---ccc-ccCCeEEEEEEecCCceeeecCCCc------eeeeeeeeeeeccCCC-cc
Confidence 53211 01111 455 4899999999999999999999886 9999999999999997 33
Q ss_pred ceEecCcccCCCCccCCCCCceEEEeeccccccccCCCCccccceEEEecCCCCceEEEEeecCCCceeeee-CCeEEEE
Q 038998 198 HLYGLGEHTKKSLKLTPNSNDTLTLWNADLFAAYLDVNLYGSHPFYIDVRSPNGTTHGVLLLNSNGMDVVYT-GDRITYK 276 (903)
Q Consensus 198 ~~YGlGE~~~~~~~l~~~~~~~~~l~n~D~~~~~~~~~lYgs~Pf~~~~~~~~g~~~Gvf~~Ns~~~dv~~~-~~~~~~~ 276 (903)
.+||+|||.+.+++...+ +.+++||++|..+..++.||||+|||||+.+.. +.+||||++|||+|||.++ ...++||
T Consensus 183 ~iyG~gE~~~~~~~~~~~-~~t~~l~~rd~~p~~~~~NLYGshPfymcle~~-~~~~GVflLnSNamEv~~~p~p~L~YR 260 (805)
T KOG1065|consen 183 EIYGLGEHTHQSYRHDMN-NLTWTLFARDYSPNLPGVNLYGSHPFYLCLEDD-SGAHGVFLLNSNAMEVTLRPGPSLTYR 260 (805)
T ss_pred cccccccccchhhhcccC-CceeeeeecccCCCCCcccccccccceeEeecc-CCCceEEEeccCCceEEeccCCeeEEE
Confidence 399999999887643333 699999999998766889999999999999987 6789999999999999999 6899999
Q ss_pred EEcCEEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCcccccceeeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccCCC
Q 038998 277 VIGGIIDLYFFAGPSPDSVIQQYTEFIGRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGY 356 (903)
Q Consensus 277 ~~gG~lD~y~f~G~~p~~vi~qY~~ltG~p~lpP~WalG~~qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~ 356 (903)
++||++|+|+|+||+|+.|++||.+++|+|.|||+|+||||+|||+|++.+++++++++++++|||+|++|+|||||+++
T Consensus 261 ~iGGilD~y~flGptPe~vvqQy~q~iG~P~m~pYWslGf~~~RwgY~nls~~~dvv~~~~~agiPld~~~~DiDyMd~y 340 (805)
T KOG1065|consen 261 TIGGILDFYVFLGPTPEGVVQQYLQLIGRPAMPPYWSLGFQLCRWGYKNLSVVRDVVENYRAAGIPLDVIVIDIDYMDGY 340 (805)
T ss_pred eecceEEEEEecCCChHHHHHHHHHHhCCccCCchhhccceecccccccHHHHHHHHHHHHHcCCCcceeeeehhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCChhHHHHHHHHHHHcCceEEEEecCCCCCCCChHHHHHhHhCCeeeecC-CcC-eeeeeeCCCccccCCC
Q 038998 357 KDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRD-GVP-YVGQVWEGPLNFPDFV 434 (903)
Q Consensus 357 ~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~-g~~-~~g~~WpG~~~~~Dft 434 (903)
+|||+|+.+||. ++++++.||++|+|+|+|+||+|+.+..|..|++|.+++++|++. |.+ ++|.+|||.++||||+
T Consensus 341 kDFTvd~~~fp~--~~~fv~~Lh~~G~kyvliidP~is~~~~y~~y~~g~~~~v~I~~~~g~~~~lg~vwP~~~~fpDft 418 (805)
T KOG1065|consen 341 KDFTVDKVWFPD--LKDFVDDLHARGFKYVLIIDPFISTNSSYGPYDRGVAKDVLIKNREGSPKMLGEVWPGSTAFPDFT 418 (805)
T ss_pred cceeeccccCcc--hHHHHHHHHhCCCeEEEEeCCccccCccchhhhhhhhhceeeecccCchhhhcccCCCcccccccC
Confidence 999999999994 899999999999999999999999998899999999999999985 877 8999999999999999
Q ss_pred ChHHHHHHHHHHHHHhccCCCceEEeeccccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCccccc
Q 038998 435 NPATQTFWENEIKLFRDILPLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYN 514 (903)
Q Consensus 435 np~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~ 514 (903)
||++.+||.+++++|++.+++||+|+||||+++|+. || ++.......+..+| |+
T Consensus 419 np~~~~Ww~~~~~~fh~~vp~dg~wiDmnE~snf~~-----------pp--~~~~~~~~~~~~~t-------------yd 472 (805)
T KOG1065|consen 419 NPAVVEWWLDELKRFHDEVPFDGFWIDMNEPSNFPS-----------PP--INPTLDNGDLYAKT-------------YD 472 (805)
T ss_pred CchHHHHHHHHHHhhcccCCccceEEECCCcccCCC-----------CC--cccccccccccccc-------------hh
Confidence 999999999999999999999999999999999974 33 22222222222222 89
Q ss_pred ccchhhhhHHHHHHHHHHHHhCCCCEEEecccccCCCCcccccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCC
Q 038998 515 VHSLYGLLEAKATRAALINAVGKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQ 594 (903)
Q Consensus 515 ~HNlYg~~~~~at~~al~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~ 594 (903)
.||+||+.+++|+++++.+.+++|+||++||+|+|++||++||+|||.++|+.|+.+|++||+|+|+|+||+|+|||||.
T Consensus 473 ~~~lyg~~~aiat~~a~~~v~~kr~~i~srsTf~g~g~y~~hwlgdn~~~w~~L~~sI~gml~fnl~Gip~Vg~Dicgf~ 552 (805)
T KOG1065|consen 473 THNLYGYSEAIATHQALVDVPGKRSFILSRSTFVGSGRYAGHWLGDNTARWEDLQTSISGMLEFNLFGIPMVGSDICGFL 552 (805)
T ss_pred hhhhHhHHHhhhhhccceeccccccccccccceecccccceeecccccceehhccccchhhhcccccCCCccchhhhcCC
Confidence 99999999999999999988899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhccccccccccCCCCCCCccccCchHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCcccccCCCCC
Q 038998 595 RNTTEELCRRWIQLGAFYPFARDHSDKFKIRQELYLWDSVAATARKVLGLRYRLLPYFYTLMYEAHTKGTPIARPLFFSF 674 (903)
Q Consensus 595 g~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qePw~~~~~~~~~r~~i~lRY~LLPYlYtl~~~a~~~G~Pv~RPL~~ef 674 (903)
|.++||||.||+|+|||+||||+|+..+..+|||+.|+++++++|+++-+||.||||+||++++||..|.||+||||+||
T Consensus 553 ~~~~eELc~RW~q~gaF~Pf~R~hn~~~~~~qe~~~~~sv~~a~r~~~~~ry~~lP~lytl~~~A~~sG~pV~RPlf~~f 632 (805)
T KOG1065|consen 553 GPPTEELCLRWLQLGAFYPFSRNHNSPGEPRQEPYTWSSVAEAARNALTLRYTLLPYLYTLFYRAHVSGEPVARPLFFEF 632 (805)
T ss_pred CCCCHHHHHHHHHhccCCchhhccCCCCCcccChhhHHHHHHHHHHhhhheeeehhhHHHhhhhhhhcCCcceeeeeeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCceeeecCcceEeeeecCCceEEEEEcCCCeeeeeccCceeeeecCCe-EEEEeCCCCceeEEeeCCeEEe
Q 038998 675 PQDARTYEISTQFLIGKGVIVSPVLRSGAVSVDAYFPGGNWFDLFNFSNSVSVSSGK-QITLDAPPDHINVHVREGNILA 753 (903)
Q Consensus 675 P~D~~~~~i~~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G~Wyd~~tg~~~~~~~gG~-~v~~~apld~iPvfvR~GsIIP 753 (903)
|+|++++.+++|||||++|||||||++|+++|++|||.|.|||.+++.... +.+ .++..+|+|+||+|+|+|.|||
T Consensus 633 P~D~~~~~v~~qFl~G~~llvaPvl~~g~~~v~~y~P~g~Wyd~~~~~~~~---~~~~~~~~~~p~d~i~v~~r~g~ilp 709 (805)
T KOG1065|consen 633 PTDPATLIVSDQFLWGESLLVAPVLYQGATEVEAYLPQGVWYDGFDGSYRV---GSKWMVTYAAPLDKIPVFLRGGYILP 709 (805)
T ss_pred CCChhhhcccceeEeccccccccchhcCceEEEEEccCceeeecCCcceEe---eeecccccCCchhhccchhccCceee
Confidence 999999999999999999999999999999999999999999999987653 333 4578899999999999999999
Q ss_pred ccCCCcccccccCCceEEEEEeCCCCceEEEEEeeCCcceeecccCCeEEEEEEEEEEecCEEEEEEEEecccccCCcce
Q 038998 754 LQGEAMTTDAARKTPFQLLVVVSNTEDSTGDVFLDDGEEVEMGDVGGKWSLVRFYAGIINNNVTIRSQVVNRDFALSQKW 833 (903)
Q Consensus 754 ~~~~~~~t~~~~~~~~~l~v~~~~~g~A~G~ly~DDG~s~~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~~~~y~~~~~~ 833 (903)
+|. +.|+|++..+| |+|+||||||++++ .++.+. |.+..+ +.+.+..+.|+..
T Consensus 710 ~q~------------~~l~~a~~~~~-a~g~l~~ddge~~~---~~~~~~---f~~~~~-----~~~~~~~~~~~~~--- 762 (805)
T KOG1065|consen 710 MQQ------------FELLVALDENG-ASGELYWDDGETLE---AGGGYS---FSFSST-----LLSNVKEGKYAES--- 762 (805)
T ss_pred ecc------------cceeeeeccCC-cceeeecCCCcchh---cCCCcE---EEEeee-----eEEEeeccccccc---
Confidence 997 78999999999 99999999999998 234443 666653 3445667788754
Q ss_pred EEEEEEEEeccccCCccceEEEECCeeeee
Q 038998 834 IIDKVTFIGLKKFKRLKGYKLSTTRESEFT 863 (903)
Q Consensus 834 ~~~~i~i~g~~~~~~~~~~~v~~ng~~~~~ 863 (903)
.+++|+|+| . ++++|++||+++..
T Consensus 763 ~~~~v~ilg-~-----~~~~~~~ng~~~~~ 786 (805)
T KOG1065|consen 763 TLDKVTILG-P-----NFSSFTLNGSPVNV 786 (805)
T ss_pred cceEEEEec-C-----CcceEEECCeEEEE
Confidence 789999999 2 56899999999853
No 3
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds
Probab=100.00 E-value=3.1e-143 Score=1291.68 Aligned_cols=605 Identities=33% Similarity=0.634 Sum_probs=542.0
Q ss_pred ecceEEEEeeCCCCCCceEecCcccCCCCccCCCCCceEEEeeccccccc-cCCCCccccceEEEecCCCCceEEEEeec
Q 038998 182 KDQYIQLSSALPKGSAHLYGLGEHTKKSLKLTPNSNDTLTLWNADLFAAY-LDVNLYGSHPFYIDVRSPNGTTHGVLLLN 260 (903)
Q Consensus 182 ~dq~~~~~~~lp~~~~~~YGlGE~~~~~~~l~~~~~~~~~l~n~D~~~~~-~~~~lYgs~Pf~~~~~~~~g~~~Gvf~~N 260 (903)
.+....+.+++|+ ++++|||||+.++ + ++. ++++++||+|..++. ...+||++|||||+++.. +.++|||++|
T Consensus 60 ~~~~~~~~~~l~~-~e~~YGlGE~~g~-L--~rr-G~~~~lwN~D~~gy~~~~~~LY~siPf~l~~~~~-g~~yGVf~dn 133 (978)
T PLN02763 60 DGDQQIVTFELPS-GTSFYGTGEVSGP-L--ERT-GKRVYTWNTDAWGYGQNTTSLYQSHPWVFVVLPN-GEALGVLADT 133 (978)
T ss_pred eCCEEEEEEEcCC-CCeEEeCCccCCc-c--ccC-CcEEEEEECCCCccCCCCCcccccEeEEEEEecC-CcEEEEEEeC
Confidence 3344456778884 8999999999874 4 432 389999999997543 346899999999998754 6789999999
Q ss_pred CCCceeeeeCC-eEEEEEEcCEEEEEEE-eC--CCHHHHHHHHHHHhCCCCCCCCcccccceeeeCCCCHHHHHHHHHHh
Q 038998 261 SNGMDVVYTGD-RITYKVIGGIIDLYFF-AG--PSPDSVIQQYTEFIGRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGY 336 (903)
Q Consensus 261 s~~~dv~~~~~-~~~~~~~gG~lD~y~f-~G--~~p~~vi~qY~~ltG~p~lpP~WalG~~qsr~gY~~~~~v~~vv~~~ 336 (903)
++.+++++... .+.|.+.+ |+|++ .| ++|++|+++|++|||+|+|||+||||||||||+|.++++|++++++|
T Consensus 134 s~~~~fDlg~~~~~~f~a~~---~y~~i~~G~gptp~eVi~~Yt~LTGrp~mpP~WALGy~qSR~~Y~sq~eV~eva~~f 210 (978)
T PLN02763 134 TRRCEIDLRKESIIRIIAPA---SYPVITFGPFPSPEALLTSLSHAIGTVFMPPKWALGYQQCRWSYESAKRVAEIARTF 210 (978)
T ss_pred CCcEEEEEcCCceEEEEecC---ceEEEEecCCCCHHHHHHHHHHHhCCCCCCchHHhheeeccCCCCCHHHHHHHHHHH
Confidence 99999988654 45666653 67765 45 79999999999999999999999999999999999999999999999
Q ss_pred HhcCCCceEEEEeccccCCCCccccCCCCCChhHHHHHHHHHHHcCceEEEEecCCCCCCCChHHHHHhHhCCeeeecC-
Q 038998 337 AKAVIPLEVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRD- 415 (903)
Q Consensus 337 ~~~~IP~D~iwlDidy~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~- 415 (903)
|+++||||+||+|||||+++++||||+++||+| ++|+++||++|+|+++|+||+|+.+++|..|++|+++++|||+.
T Consensus 211 re~~IP~DvIwlDidYm~g~~~FTwD~~rFPdP--~~mv~~Lh~~G~kvv~iidPgI~~d~gY~~y~eg~~~~~fvk~~~ 288 (978)
T PLN02763 211 REKKIPCDVVWMDIDYMDGFRCFTFDKERFPDP--KGLADDLHSIGFKAIWMLDPGIKAEEGYFVYDSGCENDVWIQTAD 288 (978)
T ss_pred HHcCCCceEEEEehhhhcCCCceeECcccCCCH--HHHHHHHHHCCCEEEEEEcCCCccCCCCHHHHhHhhcCeeEECCC
Confidence 999999999999999999999999999999977 89999999999999999999999988899999999999999986
Q ss_pred CcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeeccccccCCCCCCCCCCCCCCCCccccCCCCccCC
Q 038998 416 GVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPI 495 (903)
Q Consensus 416 g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l 495 (903)
|++|+|.||||.++|||||||+|++||.++++++.+ .|+||||+|||||++|+..
T Consensus 289 G~~y~G~vWpG~~~fpDFTnP~ar~WW~~~~k~l~d-~GVDG~W~DmnEPa~f~~~------------------------ 343 (978)
T PLN02763 289 GKPFVGEVWPGPCVFPDFTNKKTRSWWANLVKDFVS-NGVDGIWNDMNEPAVFKTV------------------------ 343 (978)
T ss_pred CCeeEeeecCCCccccCCCCHHHHHHHHHHHHHHhc-CCCcEEEccCCCCccccCC------------------------
Confidence 899999999999999999999999999999998876 8999999999999999641
Q ss_pred CCccccccccccCC------cccccccchhhhhHHHHHHHHHHHH-hCCCCEEEecccccCCCCcccccCCCCcCchHHH
Q 038998 496 NNKTIPATALHYGN------VTEYNVHSLYGLLEAKATRAALINA-VGKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDL 568 (903)
Q Consensus 496 ~~~t~~~~~~h~~~------~~~~~~HNlYg~~~~~at~~al~~~-~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L 568 (903)
.+++|.+..|.++ ..|+++||+||+++++|+++++++. +++|||+||||+|+|+|||+++|+|||.++|++|
T Consensus 344 -~~t~P~~~~h~g~~~~gG~~~h~~~HNlYgll~akatyEgl~~~~~~kRPFilTRSgfaGsQRYaa~WtGDn~SsWe~L 422 (978)
T PLN02763 344 -TKTMPETNIHRGDEELGGVQNHSHYHNVYGMLMARSTYEGMLLANKNKRPFVLTRAGFIGSQRYAATWTGDNLSNWEHL 422 (978)
T ss_pred -cCCCCccccccCCcccCCccCHHHHhhhhHHHHHHHHHHHHHHhCCCCCcEEEEccccCcCCCCceEECCCccCCHHHH
Confidence 2355666666542 2689999999999999999999875 5789999999999999999999999999999999
Q ss_pred HHhHHHHHhcccccCCeEeeccCCCCCCCChHHHHHHHHhccccccccccCCCCCCCccccCch-HHHHHHHHHHHHHHH
Q 038998 569 AYTIPSILNFGLFGIPMVGADICGFQRNTTEELCRRWIQLGAFYPFARDHSDKFKIRQELYLWD-SVAATARKVLGLRYR 647 (903)
Q Consensus 569 ~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qePw~~~-~~~~~~r~~i~lRY~ 647 (903)
+.+|+++|++||+|+||||+|||||.|++++|||+||+|+|||+||||+|+..++.+||||.|+ ++.+++|++|++||+
T Consensus 423 ~~sI~~~LnlgLSGipf~G~DIGGF~G~~~~ELy~RW~Q~GaF~P~fR~Hs~~gt~~qEPW~fgeev~~i~R~ai~LRYr 502 (978)
T PLN02763 423 HMSIPMVLQLGLSGQPLSGPDIGGFAGDATPKLFGRWMGVGAMFPFARGHSEQGTIDHEPWSFGEECEEVCRLALKRRYR 502 (978)
T ss_pred HHHHHHHHHHHhcCCcccccccCCCCCCCCHHHHHHHHHHhhhhHHhhhccCCCCCCcCCeecChHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999888999999997 677999999999999
Q ss_pred hHHHHHHHHHHHHhcCCcccccCCCCCCCCccccccCceeeecCcceEeee-ecCCceEEEEEcCCCeeeeeccCceeee
Q 038998 648 LLPYFYTLMYEAHTKGTPIARPLFFSFPQDARTYEISTQFLIGKGVIVSPV-LRSGAVSVDAYFPGGNWFDLFNFSNSVS 726 (903)
Q Consensus 648 LLPYlYtl~~~a~~~G~Pv~RPL~~efP~D~~~~~i~~Qfm~G~~LLVaPV-l~~g~t~~~vYlP~G~Wyd~~tg~~~~~ 726 (903)
|||||||++++||++|.||||||||+||+|++++++++|||+|++|||||| +++++++|+||||+|.||||++++..
T Consensus 503 LLPYiYSL~~eA~~tG~PImRPL~~efP~D~~a~~iddQFM~G~~LLVAPVv~~~g~tsr~VYLP~G~WyDf~t~~~~-- 580 (978)
T PLN02763 503 LLPHFYTLFYKAHTTGLPVMTPIFFADPKDPSLRKVENSFLLGPLLISASTLPDQGSDNLQHVLPKGIWQRFDFDDSH-- 580 (978)
T ss_pred HHHHHHHHHHHHHhhCCceeeceecCCCCChHHhccCceEEEcCCeEEcceeccCCceEEEEECCCCcEEecCCCCcc--
Confidence 999999999999999999999999999999999999999999999999998 58899999999999999999987531
Q ss_pred ecCCeEEEEeCCCCceeEEeeCCeEEeccCCCcccccc-cCCceEEEEEeCCCCceEEEEEeeCCcceeecccCCeEEEE
Q 038998 727 VSSGKQITLDAPPDHINVHVREGNILALQGEAMTTDAA-RKTPFQLLVVVSNTEDSTGDVFLDDGEEVEMGDVGGKWSLV 805 (903)
Q Consensus 727 ~~gG~~v~~~apld~iPvfvR~GsIIP~~~~~~~t~~~-~~~~~~l~v~~~~~g~A~G~ly~DDG~s~~~~~~~g~~~~~ 805 (903)
. +.+|||||+|+|||++++.+++.+. +.++++|+|+++++|+|+|+||+|||+|++| ++|+|..+
T Consensus 581 -~-----------~~pplfVR~GsIIPl~~~~~~~~e~~~~~~l~L~V~~~~~g~a~g~LYeDDG~s~~Y--e~G~y~~~ 646 (978)
T PLN02763 581 -P-----------DLPLLYLQGGSIIPLGPPIQHVGEASLSDDLTLLIALDENGKAEGVLYEDDGDGFGY--TKGDYLLT 646 (978)
T ss_pred -c-----------CCccEEEeCCEEEEeccccccccccccCCceEEEEccCCCCcEEEEEEEcCCCcccc--cCCcEEEE
Confidence 0 3457999999999999887766544 5689999999999999999999999999998 57999999
Q ss_pred EEEEEEecCEEEEEEEEecccccCCcceEEEEEEEE
Q 038998 806 RFYAGIINNNVTIRSQVVNRDFALSQKWIIDKVTFI 841 (903)
Q Consensus 806 ~f~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i~i~ 841 (903)
+|+++..++++++++....|+|... .+--+|+++
T Consensus 647 ~f~~~~~~~~~~i~i~~~~G~y~~~--~r~~~v~l~ 680 (978)
T PLN02763 647 HYEAELVSSEVTVRVASTEGSWKRP--KRRLHVRLL 680 (978)
T ss_pred EEEEEeCCCEEEEEEcccCCCCCCc--cceEEEEEE
Confidence 9999987777888888889999753 222345554
No 4
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.3e-132 Score=1190.17 Aligned_cols=583 Identities=36% Similarity=0.663 Sum_probs=533.1
Q ss_pred cceEEEEeeCCCCCCceEecCcccCCCCccCCCCCceEEEeecccccc--ccCCCCccccceEEEecCCCCceEEEEeec
Q 038998 183 DQYIQLSSALPKGSAHLYGLGEHTKKSLKLTPNSNDTLTLWNADLFAA--YLDVNLYGSHPFYIDVRSPNGTTHGVLLLN 260 (903)
Q Consensus 183 dq~~~~~~~lp~~~~~~YGlGE~~~~~~~l~~~~~~~~~l~n~D~~~~--~~~~~lYgs~Pf~~~~~~~~g~~~Gvf~~N 260 (903)
++++...+++. .++++|||||++.. +.++ .+++++||.|.... ....++|.++||+++.+ .+|+|+.|
T Consensus 140 ~~~~~~~~~~~-~~e~~yGlge~~~~---l~~~-~~~~~~wn~D~~~~~~~~~~~~y~~iPf~~s~~-----gyg~~~~n 209 (772)
T COG1501 140 GGYVFLYFDLG-GGEHVYGLGERAGG---LGRN-GQTYRLWNADAGTYTGGDYDNLYASIPFYLSSR-----GYGLFVDN 209 (772)
T ss_pred CccEEEEEEec-CCceEeeccccccc---cccC-cceEEeeecCCCcccccccccccccCCEEEEcc-----ceEEEEEC
Confidence 45667778886 48999999999975 3443 37999999999854 33478999999999974 38999999
Q ss_pred CCCceeeeeCC---eEEEEEEcCEEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCcccc-cceeeeCCCCHHHHHHHHHHh
Q 038998 261 SNGMDVVYTGD---RITYKVIGGIIDLYFFAGPSPDSVIQQYTEFIGRPAPMPYWSFG-FHQCRYGYKNVSDLEAVVAGY 336 (903)
Q Consensus 261 s~~~dv~~~~~---~~~~~~~gG~lD~y~f~G~~p~~vi~qY~~ltG~p~lpP~WalG-~~qsr~gY~~~~~v~~vv~~~ 336 (903)
+....+.++.. ...|.+++|.||+||++||++++|+++|+++||||+|||+|||| +|+||+.|.++++|.++++.+
T Consensus 210 ~~~~~fd~~~~~~~~~~~~~e~~~ldyyv~~G~~~~~vi~~yt~lTGkp~l~P~Wa~G~~~~~~~~~~~e~~v~~~i~~~ 289 (772)
T COG1501 210 SAYGSFDVGSEEYSYVQFSVEGGQLDYYVIAGPTPKDVLEKYTDLTGKPPLPPKWALGWLWTSRYTYYDEDEVLEFIDEM 289 (772)
T ss_pred CCceEEEcCCcceEEEEEEecCCcEEEEEEeCCCHHHHHHHHHHhhCCCCCCCceecCCCceeccccccHHHHHHHHhhc
Confidence 99988877653 45567888999999999999999999999999999999999999 999999999999999999999
Q ss_pred HhcCCCceEEEEecc-ccCCCCccccCCCCCChhHHHHHHHHHHHcCceEEEEecCCCCCCCChHHHHHhHhCCeeeecC
Q 038998 337 AKAVIPLEVMWTDID-YMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRD 415 (903)
Q Consensus 337 ~~~~IP~D~iwlDid-y~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~ 415 (903)
++++||||+||+|+| ||+++++|+||+.+||+| ++|+++||++|+|+++|++|+|+.+. +.|++++++|+|+|+.
T Consensus 290 ~~~~IP~d~~~lD~~~~~~~~~~F~wd~~~FP~p--k~mi~~l~~~Gikl~~~i~P~i~~d~--~~~~e~~~~Gy~~k~~ 365 (772)
T COG1501 290 RERDIPLDVFVLDIDFWMDNWGDFTWDPDRFPDP--KQMIAELHEKGIKLIVIINPYIKQDS--PLFKEAIEKGYFVKDP 365 (772)
T ss_pred ccccCcceEEEEeehhhhccccceEECcccCCCH--HHHHHHHHhcCceEEEEeccccccCC--chHHHHHHCCeEEECC
Confidence 999999999999998 999999999999999987 89999999999999999999999876 6899999999999987
Q ss_pred -CcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeeccccccCCCCCCCCCCCCCCCCccccCCCCccC
Q 038998 416 -GVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNGTRRP 494 (903)
Q Consensus 416 -g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~ 494 (903)
|.++.+.+|||.+++||||||++++||++...+.+.++|+||||+|||||+.|+..
T Consensus 366 ~g~~~~~~~w~~~~a~~DFtnp~~r~Ww~~~~~~~l~d~Gv~g~W~D~nEp~~~~~~----------------------- 422 (772)
T COG1501 366 DGEIYQADFWPGNSAFPDFTNPDAREWWASDKKKNLLDLGVDGFWNDMNEPEPFDGD----------------------- 422 (772)
T ss_pred CCCEeeecccCCcccccCCCCHHHHHHHHHHHHhHHHhcCccEEEccCCCCcccccc-----------------------
Confidence 89999999999999999999999999996444444469999999999999877430
Q ss_pred CCCccccccccccCCcccccccchhhhhHHHHHHHHHHHH-hCCCCEEEecccccCCCCcccccCCCCcCchHHHHHhHH
Q 038998 495 INNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALINA-VGKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIP 573 (903)
Q Consensus 495 l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~al~~~-~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~sI~ 573 (903)
.++.+..++++||+|++++++|+++|+++. +++|||+||||+|+|+|||+++|+||+.++|++|+.+|+
T Consensus 423 ----------~~~~g~~~~~~~N~yp~~~~~a~~~~~~~~~~~~r~~~lsRsg~aG~Q~~~~~WsGD~~s~wd~l~~si~ 492 (772)
T COG1501 423 ----------GFGNGIDHEEMHNLYPLLYAKAVYEALKELGGNERPFILSRSGYAGSQRYAAHWSGDNRSSWDSLRESIP 492 (772)
T ss_pred ----------ccccccCHHHHhcchhHHHHHHHHHHHHhhcCCCceEEEEecccccceeccceeCCccccchHHHHhhHH
Confidence 245566889999999999999999999998 579999999999999999999999999999999999999
Q ss_pred HHHhcccccCCeEeeccCCCCC--CCChHHHHHHHHhccccccccccCCCCCCCccccCch-HHHHHHHHHHHHHHHhHH
Q 038998 574 SILNFGLFGIPMVGADICGFQR--NTTEELCRRWIQLGAFYPFARDHSDKFKIRQELYLWD-SVAATARKVLGLRYRLLP 650 (903)
Q Consensus 574 ~~L~~~l~Gip~~G~DIgGF~g--~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~~qePw~~~-~~~~~~r~~i~lRY~LLP 650 (903)
++|++||+|+||||+|||||.| ++++|||+||+|+|+|+|+||.|+. ++.+||||.|+ ++.+++|+++++||+|||
T Consensus 493 ~~Ls~~~sGi~~wg~DiGGF~g~~~~~~EL~~RW~q~g~F~P~~R~H~~-d~~~rePW~~~e~~~~i~r~~~~lR~~LlP 571 (772)
T COG1501 493 AGLSLSLSGIPFWGHDIGGFTGGDDPTAELYIRWYQFGAFSPIFRLHGN-DNIPREPWAFGEETEEIVREYIQLRYRLLP 571 (772)
T ss_pred hhhchhccCCccccccccccCCCCCCCHHHHHHHHHHHhcCchhhhhCC-CCCCCCCccCChhHHHHHHHHHHHHHccch
Confidence 9999999999999999999999 7899999999999999999999998 77899999999 667999999999999999
Q ss_pred HHHHHHHHHHhcCCcccccCCCCCCCCccccccCceeeecCcceEeeeecCCceEEEEEcCCCeeeeeccCceeeeecCC
Q 038998 651 YFYTLMYEAHTKGTPIARPLFFSFPQDARTYEISTQFLIGKGVIVSPVLRSGAVSVDAYFPGGNWFDLFNFSNSVSVSSG 730 (903)
Q Consensus 651 YlYtl~~~a~~~G~Pv~RPL~~efP~D~~~~~i~~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G~Wyd~~tg~~~~~~~gG 730 (903)
||||++.+|+++|.|||||||++||+|++++++++|||+|++||||||+++|+++|+||||+|.|||||||+.+ +||
T Consensus 572 YiYt~~~~a~~tG~P~mRplf~~fp~D~~~~~iddqym~G~~lLVAPV~~eg~~~r~vyLP~g~W~d~~tg~~~---~Gg 648 (772)
T COG1501 572 YIYTLAAEASETGLPMMRPLFLEFPEDETTYNLDDQYMFGDDLLVAPVVEEGQTSREVYLPEGTWYDFWTGEEY---EGG 648 (772)
T ss_pred HHHHHHHHHhccCCcceehhheeCCCChhhhhcccceecccceEEeeccccCcceEEEECCCceEEEccCCCEE---eCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999976 789
Q ss_pred eEEEEeCCCCceeEEeeCCeEEeccCCCcccccccCCceEEEEEeCCCCceEEEEEeeCCcceeecccCCeEEEEEEEEE
Q 038998 731 KQITLDAPPDHINVHVREGNILALQGEAMTTDAARKTPFQLLVVVSNTEDSTGDVFLDDGEEVEMGDVGGKWSLVRFYAG 810 (903)
Q Consensus 731 ~~v~~~apld~iPvfvR~GsIIP~~~~~~~t~~~~~~~~~l~v~~~~~g~A~G~ly~DDG~s~~~~~~~g~~~~~~f~~~ 810 (903)
+++++.||+++||||||+|+|||++...+.......++..+.|++..++ |++.+|.|||++..+ ++|+|...+++++
T Consensus 649 ~~i~~~apl~~iPvfvR~Gsiip~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~y~ddG~~~~~--~~~~~~~~~~~~~ 725 (772)
T COG1501 649 QTITVEAPLETIPVFVRAGSIIPLLENELYVGESYVEDVAFDVFPGQDG-ASGELYDDDGESFAY--EKGEYTDSKITVS 725 (772)
T ss_pred eeEEEecCccCCceEEecCceeecccchhhccccccCCceEEEEeccCC-ceEEEEccCCeEEEE--EeeeeecceEEEE
Confidence 9999999999999999999999999998777777777888899988777 999999999999988 5688988888888
Q ss_pred EecCEEEEE
Q 038998 811 IINNNVTIR 819 (903)
Q Consensus 811 ~~~~~~~~~ 819 (903)
.......++
T Consensus 726 ~~~~~~~~~ 734 (772)
T COG1501 726 NTKHGVEVT 734 (772)
T ss_pred cccceeEEE
Confidence 754444443
No 5
>PRK10658 putative alpha-glucosidase; Provisional
Probab=100.00 E-value=2.5e-129 Score=1159.08 Aligned_cols=596 Identities=23% Similarity=0.438 Sum_probs=521.1
Q ss_pred eeEEEEEEEeeCCEEEEEEEcCC-----CCcccCCccccCCCCCCCCCCCCCCCcceeeecCccEEEEEEecC-CeEEEE
Q 038998 83 YNLNLFASLETKDRLRVRLTDSN-----NQRWEIPQEIIPRQFHPTGHNRSLPENHFLSDATSDLVFTLHNTT-PFGFSV 156 (903)
Q Consensus 83 ~~l~~~v~~~~~~~lrv~i~d~~-----~~r~~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-pf~~~v 156 (903)
..+.++|+...++++||++.... ...|++... +... .. ...+...++..+++|++.|+ ++ ||.|++
T Consensus 51 ~~~~~~~~~~~~~iirV~~~~~~~~~~~~~~~~~~~~----~~~~-~~--i~~~~~~~~i~s~~l~v~i~-~~~~~~i~~ 122 (665)
T PRK10658 51 PLFTIRFSSPQEGVIGVRIEHFQGALDNGPHFPLNIL----QDVK-VE--IEETEDYAELKSGNLSARVS-KGEFWSLDF 122 (665)
T ss_pred CeEEEEEEeccCCeEEEEEECCCCccCCCCCceeccC----CCCc-eE--EEEcCCEEEEEeCCEEEEEE-cCCCeEEEE
Confidence 35778888899999999999432 223443221 1110 00 11123346677889999995 55 899999
Q ss_pred EEccCCcEEeecCCCCCCCCceeee---ecceEEEEeeCCCCCCceEecCcccCCCCccCCCCCceEEEeeccccccccC
Q 038998 157 SRRSSGETLFDTSPEGSNADTFLVF---KDQYIQLSSALPKGSAHLYGLGEHTKKSLKLTPNSNDTLTLWNADLFAAYLD 233 (903)
Q Consensus 157 ~r~~~~~~l~~t~~~~~~~~~~l~f---~dq~~~~~~~lp~~~~~~YGlGE~~~~~~~l~~~~~~~~~l~n~D~~~~~~~ 233 (903)
.+ +|++|+.+.... ...+. ...++...+.|+. +|++|||||+.++ |. ++| ++++|||+|.. ...
T Consensus 123 ~~--~g~~l~~~~~~~----~~~~~~~~~~~~~~~~~~l~~-~E~~yGlGE~~~~-l~-~~G--~~~~~wn~D~~--~~~ 189 (665)
T PRK10658 123 LR--NGRRLTGSQLKS----NGYVQDNDGRNYMREQLDLGV-GETVYGLGERFTA-FV-KNG--QTVDIWNRDGG--TSS 189 (665)
T ss_pred EE--CCeEEeeccCcc----cceeecCCCcEEEEEEEecCC-CCeEECCCccCCc-cc-cCC--cEEEEEECCCC--CCC
Confidence 83 678887654321 01222 1246788888984 8999999999975 54 345 89999999964 345
Q ss_pred CCCccccceEEEecCCCCceEEEEeecCCCceeeeeC---CeEEEEEEcCEEEEEEEeCCCHHHHHHHHHHHhCCCCCCC
Q 038998 234 VNLYGSHPFYIDVRSPNGTTHGVLLLNSNGMDVVYTG---DRITYKVIGGIIDLYFFAGPSPDSVIQQYTEFIGRPAPMP 310 (903)
Q Consensus 234 ~~lYgs~Pf~~~~~~~~g~~~Gvf~~Ns~~~dv~~~~---~~~~~~~~gG~lD~y~f~G~~p~~vi~qY~~ltG~p~lpP 310 (903)
.++|++|||||+.+ .+|||++|+..+.+.+.. +.++|.++||.||+||+.|++|++|+++|++|||+|+|||
T Consensus 190 ~~~Y~~iPf~~s~~-----gyGvf~dn~~~~~fd~g~~~~~~~~~~~~g~~ldyy~~~G~tp~~v~~~Yt~LTGrp~lpP 264 (665)
T PRK10658 190 EQAYKNIPFYLTNR-----GYGVFVNHPQCVSFEVGSEKVSKVQFSVEGEYLEYFVIDGPTPKEVLDRYTALTGRPALPP 264 (665)
T ss_pred ccccccccEEEecC-----cEEEEEcCCCceEEEEecCccceEEEEecCCcEEEEEEeCCCHHHHHHHHHHHhCCCCCCc
Confidence 68999999999865 389999999998887753 4678999999999999999999999999999999999999
Q ss_pred Ccccccceee-eCC-CCHHHHHHHHHHhHhcCCCceEEEEeccccCC--CCccccCCCCCChhHHHHHHHHHHHcCceEE
Q 038998 311 YWSFGFHQCR-YGY-KNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDG--YKDFTLDPINFPADQMKKFVDTLHQNGQRYV 386 (903)
Q Consensus 311 ~WalG~~qsr-~gY-~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~--~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v 386 (903)
+||||||||| |.+ .++++|++++++|++++||||+|++|++||++ +++|+||+++||+| ++|+++||++|+|++
T Consensus 265 ~WalG~w~s~~~~~~~~e~~v~~~~~~~r~~~iP~d~i~lD~~w~~~~~~~~f~wd~~~FPdp--~~mi~~L~~~G~k~~ 342 (665)
T PRK10658 265 AWSFGLWLTTSFTTNYDEATVNSFIDGMAERDLPLHVFHFDCFWMKEFQWCDFEWDPRTFPDP--EGMLKRLKAKGLKIC 342 (665)
T ss_pred hhhhheeeecccccCCCHHHHHHHHHHHHHcCCCceEEEEchhhhcCCceeeeEEChhhCCCH--HHHHHHHHHCCCEEE
Confidence 9999999999 332 36889999999999999999999999999997 57999999999987 899999999999999
Q ss_pred EEecCCCCCCCChHHHHHhHhCCeeeecC-CcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeecccc
Q 038998 387 LILDPGISVNNSYETYIRGIEADIFIKRD-GVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMNEI 465 (903)
Q Consensus 387 ~ivdP~I~~~~~y~~y~~g~~~~~fvk~~-g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~DmnEp 465 (903)
+|++|+|+. .++.|++|+++|+|||+. |+++.+.+|||.+++||||||+|++||.++++++.+ +|+||||+||+|+
T Consensus 343 ~~i~P~i~~--~s~~f~e~~~~gy~vk~~~G~~~~~~~W~g~~~~~Dftnp~ar~W~~~~~~~l~d-~Gvdgfw~D~gE~ 419 (665)
T PRK10658 343 VWINPYIAQ--KSPLFKEGKEKGYLLKRPDGSVWQWDKWQPGMAIVDFTNPDACKWYADKLKGLLD-MGVDCFKTDFGER 419 (665)
T ss_pred EeccCCcCC--CchHHHHHHHCCeEEECCCCCEeeeeecCCCceeecCCCHHHHHHHHHHHHHHHh-cCCcEEEecCCce
Confidence 999999986 467999999999999987 999999999999999999999999999999999875 8999999999985
Q ss_pred ccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhhHHHHHHHHHHHHh-CCCCEEEec
Q 038998 466 SNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALINAV-GKRPFMLTR 544 (903)
Q Consensus 466 s~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~al~~~~-~~RpfilsR 544 (903)
+|.|+.|++|..++++||+|++++++|+++++++.. .+|||+++|
T Consensus 420 ----------------------------------~p~d~~~~~G~~~~~~hN~Y~~l~~ka~~e~l~~~~~~~r~~i~tR 465 (665)
T PRK10658 420 ----------------------------------IPTDVVWFDGSDPQKMHNYYTYLYNKTVFDVLKETRGEGEAVLFAR 465 (665)
T ss_pred ----------------------------------eeccceecCCCcHHHhcchhHHHHHHHHHHHHHHhcCCCceEEEEe
Confidence 133556777778899999999999999999999865 579999999
Q ss_pred ccccCCCCcccccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCCCCChHHHHHHHHhccccccccccCCCCCC
Q 038998 545 STFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRNTTEELCRRWIQLGAFYPFARDHSDKFKI 624 (903)
Q Consensus 545 S~f~Gsqry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~EL~~RW~QlgaF~Pf~R~H~~~~~~ 624 (903)
|+|+|+|||+++|+|||.|+|++|+.+|+++|++||||+||||+|||||.|.+++|||+||+|+|+|+|+||+|+.. .
T Consensus 466 s~~aGsQry~~~WsGD~~stw~~l~~si~~~Ls~glsG~~~~g~DIGGF~g~~~~ELy~RW~Q~g~f~P~~R~Hg~~--~ 543 (665)
T PRK10658 466 SATVGGQQFPVHWGGDCYSNYESMAESLRGGLSLGLSGFGFWSHDIGGFENTATADVYKRWCAFGLLSSHSRLHGSK--S 543 (665)
T ss_pred cccCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHhcCCccccCccCCCCCCCCHHHHHHHHHhcccChhhcccCCC--C
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999874 4
Q ss_pred CccccCch-HHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCcccccCCCCCCCCccccccCceeeecCcceEeeeecCCc
Q 038998 625 RQELYLWD-SVAATARKVLGLRYRLLPYFYTLMYEAHTKGTPIARPLFFSFPQDARTYEISTQFLIGKGVIVSPVLRSGA 703 (903)
Q Consensus 625 ~qePw~~~-~~~~~~r~~i~lRY~LLPYlYtl~~~a~~~G~Pv~RPL~~efP~D~~~~~i~~Qfm~G~~LLVaPVl~~g~ 703 (903)
.||||.|+ ++.+++|+++++||+|||||||++++||++|.||||||++|||+|++++++++|||+|++||||||+++++
T Consensus 544 ~~ePW~fg~e~~~i~r~~i~lRy~LlPYlYs~~~~a~~~G~PimRPL~~efP~D~~~~~~~~qfmlG~~lLVAPV~~~~~ 623 (665)
T PRK10658 544 YRVPWAYDEEAVDVVRFFTKLKCRLMPYLYREAAEAHERGTPMMRAMVLEFPDDPACDYLDRQYMLGDSLLVAPVFSEAG 623 (665)
T ss_pred CcCCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhccCCCChHHhcCCCceEecCCeEEeEeecCCc
Confidence 69999998 67799999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred eEEEEEcCCCeeeeeccCceeeeecCCeEEEEeCCCCceeEEeeCC
Q 038998 704 VSVDAYFPGGNWFDLFNFSNSVSVSSGKQITLDAPPDHINVHVREG 749 (903)
Q Consensus 704 t~~~vYlP~G~Wyd~~tg~~~~~~~gG~~v~~~apld~iPvfvR~G 749 (903)
+++||||+|.|||||||+.+ +||+++++++|+++||||||+|
T Consensus 624 -~r~VYLP~G~W~d~~tg~~~---~Gg~~i~~~~~l~~iPvfvR~G 665 (665)
T PRK10658 624 -DVEYYLPEGRWTHLLTGEEV---EGGRWHKEQHDFLSLPLLVRPN 665 (665)
T ss_pred -eEEEEcCCCeEEEccCCcEE---ECCEEEEEeCCCccCCEEEcCC
Confidence 79999999999999999875 7899999999999999999998
No 6
>PRK10426 alpha-glucosidase; Provisional
Probab=100.00 E-value=7.1e-120 Score=1075.96 Aligned_cols=519 Identities=24% Similarity=0.390 Sum_probs=462.9
Q ss_pred ecceEEEEeeCCCCCCceEecCcccCCCCccCCCCCceEEEeeccccccc------------------cCCCCccccceE
Q 038998 182 KDQYIQLSSALPKGSAHLYGLGEHTKKSLKLTPNSNDTLTLWNADLFAAY------------------LDVNLYGSHPFY 243 (903)
Q Consensus 182 ~dq~~~~~~~lp~~~~~~YGlGE~~~~~~~l~~~~~~~~~l~n~D~~~~~------------------~~~~lYgs~Pf~ 243 (903)
.+.-+.+.+.+++ +|++|||||+.+. |.++ | +++.|||+|++.+. ...++|.++|||
T Consensus 68 ~~~~~~~~~~~~~-~E~~yGlGE~~~~-l~~r-G--~~~~~w~~d~~~g~~~~~~~~~~~d~~~~~gg~~~~tY~~iPf~ 142 (635)
T PRK10426 68 TDNRIWLRLAADP-DEHIYGCGEQFSY-FDLR-G--KPFPLWTSEQGVGRNKQTYVTWQADCKENAGGDYYWTYFPQPTF 142 (635)
T ss_pred cCcEEEEEEecCC-CCeEECCCcCCCh-HhhC-C--CEEeeeecccccCcCccccccccccccccccCccccccceeCEE
Confidence 3444667777874 8999999999864 4332 4 79999999976211 115789999999
Q ss_pred EEecCCCCceEEEEeecCCCceeeeeC-CeEEEEEEcCEEEEEEEeCCCHHHHHHHHHHHhCCCCCCCCccc-ccceeee
Q 038998 244 IDVRSPNGTTHGVLLLNSNGMDVVYTG-DRITYKVIGGIIDLYFFAGPSPDSVIQQYTEFIGRPAPMPYWSF-GFHQCRY 321 (903)
Q Consensus 244 ~~~~~~~g~~~Gvf~~Ns~~~dv~~~~-~~~~~~~~gG~lD~y~f~G~~p~~vi~qY~~ltG~p~lpP~Wal-G~~qsr~ 321 (903)
|+.+ + +|||++|+..+++.++. +..++...+|.+|+|||.|++|++|+++|++|||||+|||+||| |+|++..
T Consensus 143 iSs~---~--ygv~~dn~~~~~fd~~~~~~~~~~~~~~~~d~y~~~G~~~~~vi~~yt~ltGr~p~~P~Wal~G~~~g~~ 217 (635)
T PRK10426 143 VSSQ---K--YYCHVDNSAYMNFDFSAPEYHELELWEDKATLRFECADTYISLLEKLTALFGRQPELPDWAYDGVTLGIQ 217 (635)
T ss_pred EEcC---C--EEEEEcCCCcEEEEecCCCccEEEEEeCCeeEEEEeCCCHHHHHHHHHHhhCCCCCCChhhccCcccccc
Confidence 9865 2 99999999999998864 34455666899999999999999999999999999999999999 9997654
Q ss_pred CCCCHHHHHHHHHHhHhcCCCceEEEEeccccCC---------CCccccCCCCCChhHHHHHHHHHHHcCceEEEEecCC
Q 038998 322 GYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDG---------YKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPG 392 (903)
Q Consensus 322 gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~---------~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~ 392 (903)
.++++|+++++++|+++||||+||+| ||++. +.+|+||+++||+| ++|+++||++|+|+++|++|+
T Consensus 218 --~~~~~v~~v~~~~r~~~IP~d~i~ld-dw~~~~~~~~g~~~~~~~~~d~~~FPdp--~~mi~~L~~~G~k~v~~i~P~ 292 (635)
T PRK10426 218 --GGTEVVQKKLDTMRNAGVKVNGIWAQ-DWSGIRMTSFGKRLMWNWKWDSERYPQL--DSRIKQLNEEGIQFLGYINPY 292 (635)
T ss_pred --CCHHHHHHHHHHHHHcCCCeeEEEEe-cccccccccccccccccceEChhhCCCH--HHHHHHHHHCCCEEEEEEcCc
Confidence 35889999999999999999999999 78742 23689999999976 899999999999999999999
Q ss_pred CCCCCChHHHHHhHhCCeeeecC-CcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeeccccccCCCC
Q 038998 393 ISVNNSYETYIRGIEADIFIKRD-GVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMNEISNFITS 471 (903)
Q Consensus 393 I~~~~~y~~y~~g~~~~~fvk~~-g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~f~~~ 471 (903)
|+. +|+.|++|.++++|+|+. |+++.+.+|||.+++||||||+|++||.+++++.+...|+||||+||||+
T Consensus 293 v~~--~~~~y~e~~~~gy~vk~~~g~~~~~~~~~~~~~~~Dftnp~ar~Ww~~~~~~~~~~~Gvdg~w~D~~E~------ 364 (635)
T PRK10426 293 LAS--DGDLCEEAAEKGYLAKDADGGDYLVEFGEFYAGVVDLTNPEAYEWFKEVIKKNMIGLGCSGWMADFGEY------ 364 (635)
T ss_pred cCC--CCHHHHHHHHCCcEEECCCCCEEEeEecCCCceeecCCCHHHHHHHHHHHHHHHhhcCCCEEeeeCCCC------
Confidence 987 478999999999999987 89999999999999999999999999999988766679999999999994
Q ss_pred CCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhhHHHHHHHHHHHHh-CCCCEEEecccccCC
Q 038998 472 PPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALINAV-GKRPFMLTRSTFVSS 550 (903)
Q Consensus 472 ~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~al~~~~-~~RpfilsRS~f~Gs 550 (903)
+|.++.|++|..+.++||+||+++++++++++++.. .+|||++|||+|+|+
T Consensus 365 ----------------------------~p~d~~~~~g~~~~~~hN~Y~~l~~~~~~e~~~~~~~~~r~f~ltRsg~aGs 416 (635)
T PRK10426 365 ----------------------------LPTDAYLHNGVSAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGYTGS 416 (635)
T ss_pred ----------------------------CCCcceeeCCCCHHHhccHHHHHHHHHHHHHHHHhcCCCCcEEEEccccCCc
Confidence 133455667778889999999999999999998864 369999999999999
Q ss_pred CCccc-ccCCCCcCchH---HHHHhHHHHHhcccccCCeEeeccCCCCC----CCChHHHHHHHHhccccccccccCCCC
Q 038998 551 GKYTA-HWTGDNAATWD---DLAYTIPSILNFGLFGIPMVGADICGFQR----NTTEELCRRWIQLGAFYPFARDHSDKF 622 (903)
Q Consensus 551 qry~~-~WtGDn~s~W~---~L~~sI~~~L~~~l~Gip~~G~DIgGF~g----~~~~EL~~RW~QlgaF~Pf~R~H~~~~ 622 (903)
|||++ +|+|||.|+|+ +|+.+|+++|++||+|+||+|+|||||.+ .+++|||+||+|+|||+|+||+|+..
T Consensus 417 Qry~~~~WsGD~~ssW~~~d~L~~~I~~~Ls~glsG~~~~g~DIGGF~~~~~~~~~~EL~~RW~Q~gaF~P~~R~H~~~- 495 (635)
T PRK10426 417 QKYSTLFWAGDQNVDWSLDDGLASVVPAALSLGMSGHGLHHSDIGGYTTLFGMKRTKELLLRWCEFSAFTPVMRTHEGN- 495 (635)
T ss_pred CCccccccCCCCCCcCcChhHHHHHHHHHHHHHhcCcCccccccCCCcCcCCCCCCHHHHHHHHHHhcCCceeecCCCC-
Confidence 99985 89999999995 89999999999999999999999999974 58999999999999999999999863
Q ss_pred CCCccccCch---HHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCcccccCCCCCCCCccccccCceeeecCcceEeeee
Q 038998 623 KIRQELYLWD---SVAATARKVLGLRYRLLPYFYTLMYEAHTKGTPIARPLFFSFPQDARTYEISTQFLIGKGVIVSPVL 699 (903)
Q Consensus 623 ~~~qePw~~~---~~~~~~r~~i~lRY~LLPYlYtl~~~a~~~G~Pv~RPL~~efP~D~~~~~i~~Qfm~G~~LLVaPVl 699 (903)
.++|||.|+ ++.+.+++++++||+|||||||++++||++|.|||||||++||+|++++++++|||+|++||||||+
T Consensus 496 -~~~epw~f~~~~~~~~~~~~~~~lRy~LlPYlytl~~~a~~tG~Pi~RPL~~~fP~D~~~~~i~~qfm~G~~LLVAPV~ 574 (635)
T PRK10426 496 -RPGDNWQFDSDAETIAHFARMTRVFTTLKPYLKELVAEAAKTGLPVMRPLFLHYEDDAATYTLKYQYLLGRDLLVAPVH 574 (635)
T ss_pred -CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccccccCCCChHHhcCCcceEecCCeEEeeec
Confidence 689999996 4457788899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceEEEEEcCCCeeeeeccCceeeeecCCeEEEEeCCCCceeEEeeCCeEEeccCC
Q 038998 700 RSGAVSVDAYFPGGNWFDLFNFSNSVSVSSGKQITLDAPPDHINVHVREGNILALQGE 757 (903)
Q Consensus 700 ~~g~t~~~vYlP~G~Wyd~~tg~~~~~~~gG~~v~~~apld~iPvfvR~GsIIP~~~~ 757 (903)
++++++|+||||+|.|||||||+.+ +|| +++++|||++||||||+|+||+.+-+
T Consensus 575 ~~g~~~r~VYLP~g~W~d~~tg~~~---~Gg-~i~v~apl~~iPvFvR~Gsi~~~~~~ 628 (635)
T PRK10426 575 EEGRTDWTVYLPEDKWVHLWTGEAF---AGG-EITVEAPIGKPPVFYRAGSEWASLFA 628 (635)
T ss_pred cCCceEEEEECCCCcEEECCCCCEE---ECC-EEEEeCCCCCcCEEEECCeEhHHHhh
Confidence 9999999999999999999999875 678 99999999999999999999987644
No 7
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=100.00 E-value=4.6e-110 Score=965.97 Aligned_cols=437 Identities=45% Similarity=0.884 Sum_probs=393.7
Q ss_pred EEEeCCCHHHHHHHHHHHhCCCCCCCCcccccceeeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccCCCCccccCCC
Q 038998 285 YFFAGPSPDSVIQQYTEFIGRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDPI 364 (903)
Q Consensus 285 y~f~G~~p~~vi~qY~~ltG~p~lpP~WalG~~qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dFt~d~~ 364 (903)
|||.|++|++|+++|++|||||+|||+||||+|+|||+|.++++|+++++++++++||+|++|+|++|+.++++|+||++
T Consensus 1 y~~~G~~~~~v~~~y~~ltG~~~~pP~walG~~~~~~~~~~~~~v~~~i~~~~~~~iP~d~~~iD~~~~~~~~~f~~d~~ 80 (441)
T PF01055_consen 1 YFFSGPTPKEVLRQYTELTGRPPLPPRWALGFWQSRWGYYNQDEVREVIDRYRSNGIPLDVIWIDDDYQDGYGDFTWDPE 80 (441)
T ss_dssp EEEEESSHHHHHHHHHHHHSSS----GGGGSEEEEESTBTSHHHHHHHHHHHHHTT--EEEEEE-GGGSBTTBTT-B-TT
T ss_pred CEEeCcCHHHHHHHHHHHHCCCCCCchhhhceEeecCcCCCHHHHHHHHHHHHHcCCCccceeccccccccccccccccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHcCceEEEEecCCCCCCCC-hHHHHHhHhCCeeeecC-CcCeeeeeeCCCccccCCCChHHHHHH
Q 038998 365 NFPADQMKKFVDTLHQNGQRYVLILDPGISVNNS-YETYIRGIEADIFIKRD-GVPYVGQVWEGPLNFPDFVNPATQTFW 442 (903)
Q Consensus 365 ~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~~-y~~y~~g~~~~~fvk~~-g~~~~g~~WpG~~~~~Dftnp~a~~ww 442 (903)
+||++ ++|++.||++|+|+++|++|+|..++. |+.|+++.++++|+++. |+++++.+|||.++++||+||++++||
T Consensus 81 ~FPd~--~~~~~~l~~~G~~~~~~~~P~v~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~ 158 (441)
T PF01055_consen 81 RFPDP--KQMIDELHDQGIKVVLWVHPFVSNDSPDYENYDEAKEKGYLVKNPDGSPYIGRVWPGKGGFIDFTNPEARDWW 158 (441)
T ss_dssp TTTTH--HHHHHHHHHTT-EEEEEEESEEETTTTB-HHHHHHHHTT-BEBCTTSSB-EEEETTEEEEEB-TTSHHHHHHH
T ss_pred cccch--HHHHHhHhhCCcEEEEEeecccCCCCCcchhhhhHhhcCceeecccCCcccccccCCcccccCCCChhHHHHH
Confidence 99965 999999999999999999999998876 88999999999999976 899999999999999999999999999
Q ss_pred HHHHHHHhccCCCceEEeeccccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhh
Q 038998 443 ENEIKLFRDILPLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLL 522 (903)
Q Consensus 443 ~~~~~~~~~~~g~dg~W~DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~ 522 (903)
.++++++++..|+||||+|||||+.|. .+.+++.++.|.++..++++||+|+++
T Consensus 159 ~~~~~~~~~~~Gvdg~w~D~~E~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~hn~y~~~ 212 (441)
T PF01055_consen 159 KEQLKELLDDYGVDGWWLDFGEPSSFD--------------------------SNNTLPEDAVHHDGYSGYEMHNLYGLL 212 (441)
T ss_dssp HHHHHHHHTTST-SEEEEESTTTBSST--------------------------TTBSBCTTEECTTECEHHHHGGGHHHH
T ss_pred HHHHHHHHhccCCceEEeecCCccccc--------------------------ccccCcccceecCCCCchheecccccc
Confidence 999999998789999999999998762 135568888899888999999999999
Q ss_pred HHHHHHHHHHHH-hCCCCEEEecccccCCCCcccccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCCCCChHH
Q 038998 523 EAKATRAALINA-VGKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRNTTEEL 601 (903)
Q Consensus 523 ~~~at~~al~~~-~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~EL 601 (903)
+++++++++++. .++|||++|||+++|+|||+++|+||+.++|++|+.+|+++|++|++|+|++|+|||||.+.+++||
T Consensus 213 ~~~~~~~~~~~~~~~~r~~~~sRs~~~G~qr~~~~w~GD~~s~w~~L~~~i~~~l~~~~~G~~~~g~DigG~~~~~~~eL 292 (441)
T PF01055_consen 213 YAKATYEALREIDPNKRPFIFSRSGWAGSQRYGGHWSGDNSSSWDGLRSSIPAMLNMGLSGYPFWGSDIGGFSGDPDEEL 292 (441)
T ss_dssp HHHHHHHHHHHHSTTSC-EEEESSEETTGGGTCEEEECSSBSSHHHHHHHHHHHHHHHCTT-SSEEEEET-SBSTSSHHH
T ss_pred chhhhhhhhhhccCCCCcceeecccCCCCCccceeecccccccHHHHHHHHHHHHHHhhhhcceecCcccccCCCCCHHH
Confidence 999999999884 5789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccccccccCCCCCCCccccCch-HHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCcccccCCCCCCCCccc
Q 038998 602 CRRWIQLGAFYPFARDHSDKFKIRQELYLWD-SVAATARKVLGLRYRLLPYFYTLMYEAHTKGTPIARPLFFSFPQDART 680 (903)
Q Consensus 602 ~~RW~QlgaF~Pf~R~H~~~~~~~qePw~~~-~~~~~~r~~i~lRY~LLPYlYtl~~~a~~~G~Pv~RPL~~efP~D~~~ 680 (903)
|+||+|+|||+|+||+|+..+..++|||.|+ ++.+++|+++++||+||||+||++++|+.+|.||||||+++||+|+.+
T Consensus 293 ~~RW~q~~~f~p~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~~lRy~L~PY~ys~~~~a~~~G~Pi~Rpl~~~~p~d~~~ 372 (441)
T PF01055_consen 293 YIRWYQFGAFSPLFRNHGNKPSNPREPWSFGDEAEDIFRRAIRLRYRLLPYIYSLAYEAHATGEPIMRPLFWEFPNDPNA 372 (441)
T ss_dssp HHHHHHHHTTSSSEEEEESTTSSB-SGGGSSCTHHHHHHHHHHHHHHCHHHHHHHHHHHHHHT--SEEEHHHHSTTSGGG
T ss_pred HHHHHHhhcCCcceeecCCcccccccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHccCCCCcccccccCCCccHhH
Confidence 9999999999999999987777789999999 577999999999999999999999999999999999999999999999
Q ss_pred cccCceeeecCcceEeeeecCCceEEEEEcCCCeeeeeccCceeeeecCCeEEEEeCCCCceeEEeeCCeEE
Q 038998 681 YEISTQFLIGKGVIVSPVLRSGAVSVDAYFPGGNWFDLFNFSNSVSVSSGKQITLDAPPDHINVHVREGNIL 752 (903)
Q Consensus 681 ~~i~~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G~Wyd~~tg~~~~~~~gG~~v~~~apld~iPvfvR~GsII 752 (903)
+++++|||+|++||||||+++|+++|+||||+|.|||++||+.+ +||+++++++|++++|||||+|+||
T Consensus 373 ~~~~~q~m~G~~lLVaPV~~~g~~~~~vylP~G~W~d~~tg~~~---~gg~~~~~~~~l~~~P~fvr~Gsii 441 (441)
T PF01055_consen 373 YDIDDQFMFGDDLLVAPVLEPGATSRTVYLPEGTWYDFWTGEKY---EGGQTITVEAPLDEIPVFVRAGSII 441 (441)
T ss_dssp GGTTSSEEETTTEEEE---STTSSEEEEEESSSEEEETTTCCEE---ESSEEEEEE--TTSCEEEEETTEEE
T ss_pred hhcCCccccCCCEEEEeeeeecccccEEECCCCeEEECCCCCEE---ECCEEEEEeCCCCccCeEEECCEeC
Confidence 99999999999999999999999999999999999999999976 7899999999999999999999998
No 8
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=100.00 E-value=6.7e-92 Score=783.92 Aligned_cols=334 Identities=63% Similarity=1.179 Sum_probs=321.8
Q ss_pred CCCCCCCCcccccceeeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccCCCCccccCCCCCChhHHHHHHHHHHHcCc
Q 038998 304 GRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQ 383 (903)
Q Consensus 304 G~p~lpP~WalG~~qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~ 383 (903)
|||+|||+||||||||||+|.++++|+++++++++++||||+||+|++|++++++|+||+++||+|++++|+++||++|+
T Consensus 1 G~p~lpP~walG~~~s~~~y~~~~~v~~~~~~~r~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp~~~~mi~~L~~~G~ 80 (339)
T cd06602 1 GRPAMPPYWALGFHLCRWGYKNVDEVKEVVENMRAAGIPLDVQWNDIDYMDRRRDFTLDPVRFPGLKMPEFVDELHANGQ 80 (339)
T ss_pred CCCCCCchHHhhhHhcCCCCCCHHHHHHHHHHHHHhCCCcceEEECcccccCccceecccccCCCccHHHHHHHHHHCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999998877999999999999
Q ss_pred eEEEEecCCCCCC---CChHHHHHhHhCCeeeecC-CcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEE
Q 038998 384 RYVLILDPGISVN---NSYETYIRGIEADIFIKRD-GVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLW 459 (903)
Q Consensus 384 k~v~ivdP~I~~~---~~y~~y~~g~~~~~fvk~~-g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W 459 (903)
|+++|++|+|..+ +.|+.|++|+++++|||+. |+++++.+|||.+.+||||||+|++||.++++++++.+|+||||
T Consensus 81 k~~~~i~P~v~~~~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~Gvdg~w 160 (339)
T cd06602 81 HYVPILDPAISANEPTGSYPPYDRGLEMDVFIKNDDGSPYIGKVWPGYTVFPDFLNPNTQEWWTDEIKDFHDQVPFDGLW 160 (339)
T ss_pred EEEEEEeCccccCcCCCCCHHHHHHHHCCeEEECCCCCEEEEEeCCCCCcCcCCCCHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 9999999999986 4789999999999999976 89999999999999999999999999999999988889999999
Q ss_pred eeccccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhhHHHHHHHHHHHHhCCCC
Q 038998 460 LDMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALINAVGKRP 539 (903)
Q Consensus 460 ~DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~al~~~~~~Rp 539 (903)
+|||||+.| +++||+|++++++++++++++..++||
T Consensus 161 ~D~~Ep~~~--------------------------------------------~~~hN~y~~~~~~~~~~~~~~~~~~r~ 196 (339)
T cd06602 161 IDMNEPSNF--------------------------------------------YDVHNLYGLSEAIATYKALQSIPGKRP 196 (339)
T ss_pred ecCCCCchH--------------------------------------------hhhcchhhHHHHHHHHHHHHhcCCCCC
Confidence 999998632 368999999999999999998888999
Q ss_pred EEEecccccCCCCcccccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCCCCChHHHHHHHHhccccccccccC
Q 038998 540 FMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRNTTEELCRRWIQLGAFYPFARDHS 619 (903)
Q Consensus 540 filsRS~f~Gsqry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~EL~~RW~QlgaF~Pf~R~H~ 619 (903)
|++|||+|+|+|||+++|+||+.|+|++|+.+|+++|++|++|+||+|+|||||.|++++|||+||+|+|+|+|+||+|+
T Consensus 197 ~~~sRs~~~G~qry~~~w~GD~~s~W~~L~~~i~~~l~~~~sG~~~~~~DigGf~g~~~~EL~~RW~Q~~~f~P~~r~H~ 276 (339)
T cd06602 197 FVISRSTFPGSGRYAGHWLGDNASTWEDLRYSIIGMLEFNLFGIPMVGADICGFNGDTTEELCARWMQLGAFYPFSRNHN 276 (339)
T ss_pred EEEEecCcccccccceeECCCccCCHHHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCCHHHHHHHHHHHhhCceeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCch-HHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCcccccCCCCCCCCcccc
Q 038998 620 DKFKIRQELYLWD-SVAATARKVLGLRYRLLPYFYTLMYEAHTKGTPIARPLFFSFPQDARTY 681 (903)
Q Consensus 620 ~~~~~~qePw~~~-~~~~~~r~~i~lRY~LLPYlYtl~~~a~~~G~Pv~RPL~~efP~D~~~~ 681 (903)
..+...+|||.|+ ++.+++|+++++||+|+|||||++++|+++|.||||||+++||+|++++
T Consensus 277 ~~~~~~~ePw~~~~~~~~~~r~~~~lRy~L~PYlys~~~~a~~~G~Pi~RPl~~~~p~D~~~~ 339 (339)
T cd06602 277 DIGAIPQEPYVWGPSVADAARKALNIRYSLLPYLYTLFYEAHTSGTTVVRPLFFEFPSDPNTY 339 (339)
T ss_pred CCCCCCcCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchhhhhhccCCCCcccC
Confidence 9888899999999 7889999999999999999999999999999999999999999999875
No 9
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=100.00 E-value=1.9e-88 Score=758.00 Aligned_cols=333 Identities=41% Similarity=0.776 Sum_probs=318.1
Q ss_pred CCCCCCCCcccccceeeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccCCCCccccCCCCCChhHHHHHHHHHHHcCc
Q 038998 304 GRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQ 383 (903)
Q Consensus 304 G~p~lpP~WalG~~qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~ 383 (903)
|+|+|||+||||||||||+|+++++|+++++++++++||||+||+|++|++++++|+||+++||+| ++|+++||++|+
T Consensus 1 G~~~lpP~walG~~~sr~~y~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp--~~mi~~L~~~G~ 78 (339)
T cd06603 1 GRPPLPPLFSLGYHQCRWNYKDQEDVKEVDAGFDEHDIPYDVIWLDIEHTDGKRYFTWDKKKFPDP--EKMQEKLASKGR 78 (339)
T ss_pred CCCCCCchHHHHHHhcCCCCCCHHHHHHHHHHHHHcCCCceEEEEChHHhCCCCceEeCcccCCCH--HHHHHHHHHCCC
Confidence 899999999999999999999999999999999999999999999999999999999999999976 899999999999
Q ss_pred eEEEEecCCCCCCCChHHHHHhHhCCeeeecC-CcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhc--cCCCceEEe
Q 038998 384 RYVLILDPGISVNNSYETYIRGIEADIFIKRD-GVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRD--ILPLDGLWL 460 (903)
Q Consensus 384 k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~-g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~--~~g~dg~W~ 460 (903)
|+++|++|+|..++.+++|++|.++++|||+. |+++.+.+|||.+++||||||+|++||.+++++++. .+|++|+|+
T Consensus 79 k~~~~~~P~v~~~~~~~~y~e~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~~~g~~g~w~ 158 (339)
T cd06603 79 KLVTIVDPHIKRDDGYYVYKEAKDKGYLVKNSDGGDFEGWCWPGSSSWPDFLNPEVRDWWASLFSYDKYKGSTENLYIWN 158 (339)
T ss_pred EEEEEecCceecCCCCHHHHHHHHCCeEEECCCCCEEEEEECCCCcCCccCCChhHHHHHHHHHHHHhhcccCCCceEEe
Confidence 99999999999877789999999999999987 889999999999999999999999999999998775 479999999
Q ss_pred eccccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhhHHHHHHHHHHHHh--CCC
Q 038998 461 DMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALINAV--GKR 538 (903)
Q Consensus 461 DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~al~~~~--~~R 538 (903)
|||||++|+.. +.++|.++.|.++..|+++||+|++++++|+++++++.. ++|
T Consensus 159 D~~Ep~~f~~~-------------------------~~~~p~d~~~~~~~~~~~~hN~y~~~~~~a~~e~~~~~~~~~~r 213 (339)
T cd06603 159 DMNEPSVFNGP-------------------------ELTMPKDAIHYGGIEHREVHNIYGLYMHMATFDGLLKRSEGNKR 213 (339)
T ss_pred ccCCccccCCC-------------------------CCcCCCcceecCCCcHHHHhhHhHHHHHHHHHHHHHHhhccCCc
Confidence 99999998641 346788899999999999999999999999999999875 589
Q ss_pred CEEEecccccCCCCcccccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCCCCChHHHHHHHHhcccccccccc
Q 038998 539 PFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRNTTEELCRRWIQLGAFYPFARDH 618 (903)
Q Consensus 539 pfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~EL~~RW~QlgaF~Pf~R~H 618 (903)
||++|||+|+|+|||+++|+||+.|+|++|+.+|+++|++|++|+||+|+|||||.+++++|||+||+|+|||+|+||+|
T Consensus 214 ~~~~sRs~~~G~qry~~~W~GD~~s~W~~L~~~i~~~L~~~l~G~~~~g~DiGGf~~~~~~EL~~RW~Q~gaf~P~~R~H 293 (339)
T cd06603 214 PFVLTRSFFAGSQRYAAIWTGDNTATWEHLKISIPMLLSLNICGIPFCGADVGGFFGNPDEELLVRWYQAGAFYPFFRAH 293 (339)
T ss_pred eEEEEecccccccceeeeeCCCccCCHHHHHHHHHHHHHHhhcCccccCCccCCcCCCCCHHHHHHHHHHhhcCceeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCch-HHHHHHHHHHHHHHHhHHHHHHHHHHHHhcC
Q 038998 619 SDKFKIRQELYLWD-SVAATARKVLGLRYRLLPYFYTLMYEAHTKG 663 (903)
Q Consensus 619 ~~~~~~~qePw~~~-~~~~~~r~~i~lRY~LLPYlYtl~~~a~~~G 663 (903)
+..+...||||.|+ ++.+++|+++++||+|||||||++++||++|
T Consensus 294 ~~~~~~~~ePw~~~~~~~~~~r~~~~lRy~LlPYlys~~~~a~~tG 339 (339)
T cd06603 294 AHIDTKRREPWLFGEEYTSIIREAIRLRYALLPYWYTLFYEASVTG 339 (339)
T ss_pred CCCCCCCCCCeecChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99888899999998 6789999999999999999999999999998
No 10
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=100.00 E-value=3.1e-88 Score=748.81 Aligned_cols=314 Identities=44% Similarity=0.835 Sum_probs=302.2
Q ss_pred CCCCCCCCcccccceeeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccCCCCccccCCCCCChhHHHHHHHHHHHcCc
Q 038998 304 GRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQ 383 (903)
Q Consensus 304 G~p~lpP~WalG~~qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~ 383 (903)
|+|+|||+||||||||||+|.++++|+++++++++++||||+||+|++|++++++|+||+++||+| ++|+++||++|+
T Consensus 1 G~~~lpP~walG~~~sr~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~FPdp--~~~i~~l~~~g~ 78 (317)
T cd06600 1 GKPALPPMWALGYHISRYSYYPQDKVVEVVDIMQKEGFPYDVVFLDIHYMDSYRLFTWDPYRFPEP--KKLIDELHKRNV 78 (317)
T ss_pred CCCCCCchHHHHHHhcCCCCCCHHHHHHHHHHHHHcCCCcceEEEChhhhCCCCceeechhcCCCH--HHHHHHHHHCCC
Confidence 899999999999999999999999999999999999999999999999999999999999999977 899999999999
Q ss_pred eEEEEecCCCCCCCChHHHHHhHhCCeeeecC-CcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeec
Q 038998 384 RYVLILDPGISVNNSYETYIRGIEADIFIKRD-GVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDM 462 (903)
Q Consensus 384 k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~-g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dm 462 (903)
|+++|++|+|+.++.++.|.+|.++++|||+. |+++.|.+|||.+++||||||+|++||.+++++++.++|+||||+||
T Consensus 79 k~~~~~~P~i~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~w~G~~~~~Dftnp~a~~ww~~~~~~~~~~~gvdg~w~D~ 158 (317)
T cd06600 79 KLVTIVDPGIRVDQNYSPFLSGMDKGKFCEIESGELFVGKMWPGTTVYPDFTNPDTREWWAGLFSEWLNSQGVDGIWLDM 158 (317)
T ss_pred EEEEEeeccccCCCCChHHHHHHHCCEEEECCCCCeEEEeecCCCccccCCCChHHHHHHHHHHHHHhhcCCCceEEeeC
Confidence 99999999999887789999999999999987 89999999999999999999999999999999988789999999999
Q ss_pred cccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhhHHHHHHHHHHHHh-CCCCEE
Q 038998 463 NEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALINAV-GKRPFM 541 (903)
Q Consensus 463 nEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~al~~~~-~~Rpfi 541 (903)
|||+.| +++||+||+++++++++++++.. ++|||+
T Consensus 159 ~Ep~~~--------------------------------------------~~~hn~y~~~~~~a~~~~~~~~~~~~r~~~ 194 (317)
T cd06600 159 NEPSDF--------------------------------------------EKVHNLYGLYEAMATAEGFRTSHPRNRIFI 194 (317)
T ss_pred CCCccH--------------------------------------------HHhcchhhHHHHHHHHHHHHHhcCCCCceE
Confidence 998632 46899999999999999998865 789999
Q ss_pred EecccccCCCCcccccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCCCCChHHHHHHHHhccccccccccCCC
Q 038998 542 LTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRNTTEELCRRWIQLGAFYPFARDHSDK 621 (903)
Q Consensus 542 lsRS~f~Gsqry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~EL~~RW~QlgaF~Pf~R~H~~~ 621 (903)
+|||+|+|+|||+++|+||+.|+|++|+.+|+++|++||+|+||+|+|||||.|++++|||+||+|+|||+|+||+|+..
T Consensus 195 ~sRs~~~G~qry~~~W~GD~~s~W~~L~~~i~~~l~~gl~G~p~~g~DiGGf~~~~~~EL~~RW~Q~gaf~P~~R~H~~~ 274 (317)
T cd06600 195 LTRSGFAGSQKYAAIWTGDNTASWDDLKLSIPLVLGLSISGIPFVGCDIGGFQGDNSMELLVRWYQLGAFFPFYRSHKAT 274 (317)
T ss_pred EEeccccccCCccceECCcccccHHHHHHHHHHHHHHHhcCCCccCcccCCCCCCCCHHHHHHHHHHhhcCceeeccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCccccCch-HHHHHHHHHHHHHHHhHHHHHHHHHHHHhcC
Q 038998 622 FKIRQELYLWD-SVAATARKVLGLRYRLLPYFYTLMYEAHTKG 663 (903)
Q Consensus 622 ~~~~qePw~~~-~~~~~~r~~i~lRY~LLPYlYtl~~~a~~~G 663 (903)
....||||.|+ ++.+++|+++++||+|||||||++++||++|
T Consensus 275 ~~~~~ePw~~~~~~~~~~r~~~~lRy~LlPYlytl~~~a~~~G 317 (317)
T cd06600 275 DGKDTEPVFFPDYYKEKVREIVELRYKLLPYLYTLFLRAHEKG 317 (317)
T ss_pred CCCCCCCeecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 87899999998 5679999999999999999999999999998
No 11
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=100.00 E-value=8.5e-88 Score=753.04 Aligned_cols=333 Identities=44% Similarity=0.842 Sum_probs=315.9
Q ss_pred CCCCCCCCcccccceeeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccCCCCccccCCCCCChhHHHHHHHHHHHcCc
Q 038998 304 GRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQ 383 (903)
Q Consensus 304 G~p~lpP~WalG~~qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~ 383 (903)
|||+|||+||||||||||+|.++++|+++++++++++||||+||+|++|++++++|+||+++||+| ++|+++||++|+
T Consensus 1 G~p~l~P~walG~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~~~~~f~~d~~~fPdp--~~m~~~l~~~g~ 78 (339)
T cd06604 1 GRPPLPPKWALGYQQSRWSYYPEEEVREIADEFRERDIPCDAIYLDIDYMDGYRVFTWDKERFPDP--KELIKELHEQGF 78 (339)
T ss_pred CCCCCCchHHHhHHhcCCCCCCHHHHHHHHHHHHHhCCCcceEEECchhhCCCCceeeccccCCCH--HHHHHHHHHCCC
Confidence 899999999999999999999999999999999999999999999999999999999999999976 899999999999
Q ss_pred eEEEEecCCCCCCCChHHHHHhHhCCeeeecC-CcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeec
Q 038998 384 RYVLILDPGISVNNSYETYIRGIEADIFIKRD-GVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDM 462 (903)
Q Consensus 384 k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~-g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dm 462 (903)
|+++|++|+|..++.|+.|++|+++++||++. |+++++.+|||.+++||||||+|++||.+++++++ +.|+||||+||
T Consensus 79 ~~~~~~~P~v~~~~~~~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~-~~Gvdg~w~D~ 157 (339)
T cd06604 79 KVVTIIDPGVKVDPGYDVYEEGLENDYFVKDPDGELYIGRVWPGLSAFPDFTNPKVREWWGSLYKKFV-DLGVDGIWNDM 157 (339)
T ss_pred EEEEEEeCceeCCCCChHHHHHHHCCeEEECCCCCEEEEEecCCCccccCCCChHHHHHHHHHHHHHh-hCCCceEeecC
Confidence 99999999999887889999999999999987 89999999999999999999999999999999887 58999999999
Q ss_pred cccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCC---cccccccchhhhhHHHHHHHHHHHHh-CCC
Q 038998 463 NEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGN---VTEYNVHSLYGLLEAKATRAALINAV-GKR 538 (903)
Q Consensus 463 nEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~---~~~~~~HNlYg~~~~~at~~al~~~~-~~R 538 (903)
|||++|+... ..|+|.++.|+++ ++++++||+|++++++|+++++++.. ++|
T Consensus 158 ~Ep~~~~~~~------------------------~~~~p~~~~~~~~~~~~~~~~~hn~y~~~~~~a~~~~~~~~~~~~r 213 (339)
T cd06604 158 NEPAVFNTPG------------------------KTTMPRDAVHRLDGGGGTHEEVHNVYGLLMARATYEGLKKARPNER 213 (339)
T ss_pred CCccccCCcc------------------------cccCCccceeeCCCCCCcHhHhcchhhHHHHHHHHHHHHHhCCCCC
Confidence 9999885421 1257888888753 48999999999999999999999876 799
Q ss_pred CEEEecccccCCCCcccccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCCCCChHHHHHHHHhcccccccccc
Q 038998 539 PFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRNTTEELCRRWIQLGAFYPFARDH 618 (903)
Q Consensus 539 pfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~EL~~RW~QlgaF~Pf~R~H 618 (903)
||++|||+|+|+|||+++|+||+.++|++|+.+|+++|++||+|+||+|+|||||.+++++|||+||+|+|||+|+||+|
T Consensus 214 ~~~~sRs~~~G~qry~~~W~GD~~ssW~~L~~~i~~~l~~~l~G~~~~g~DIGGf~~~~~~EL~~RW~Q~g~f~P~~R~H 293 (339)
T cd06604 214 PFILTRAGYAGIQRYAAVWTGDNRSSWEHLRLSIPMLLNLGLSGVPFVGADIGGFGGDPSPELLVRWMQLGAFFPFFRNH 293 (339)
T ss_pred cEEEEecccccccccccccCCcccCCHHHHHHHHHHHHHHHhcCCcccccccCCCCCCCCHHHHHHHHHHHhccchhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCch-HHHHHHHHHHHHHHHhHHHHHHHHHHHHhcC
Q 038998 619 SDKFKIRQELYLWD-SVAATARKVLGLRYRLLPYFYTLMYEAHTKG 663 (903)
Q Consensus 619 ~~~~~~~qePw~~~-~~~~~~r~~i~lRY~LLPYlYtl~~~a~~~G 663 (903)
+..+..+||||.|+ ++.+++|+++++||+|||||||++++||++|
T Consensus 294 ~~~~~~~~ePw~~~~~~~~~~r~~~~lRy~LlPY~ysl~~~a~~tG 339 (339)
T cd06604 294 SAKGTRDQEPWAFGEEVEEIAREAIKLRYRLLPYLYTLFWEASETG 339 (339)
T ss_pred CCCCCCCCCCeecChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99888899999997 6789999999999999999999999999998
No 12
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=2.6e-82 Score=701.61 Aligned_cols=292 Identities=36% Similarity=0.635 Sum_probs=263.3
Q ss_pred CCCCCCCCcccccceeeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccCCCCccccCCCCCChhHHHHHHHHHHHcCc
Q 038998 304 GRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQ 383 (903)
Q Consensus 304 G~p~lpP~WalG~~qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~ 383 (903)
|+|+|||+||||||||||+|.++++|++|+++||+++||||+||+|||||+++++||||+++||+| ++|+++||++|+
T Consensus 1 G~p~mpP~WalG~~qsr~~Y~~~~ev~~v~~~~r~~~IP~D~i~lDidy~~~~~~Ft~d~~~FPdp--~~mv~~L~~~G~ 78 (332)
T cd06601 1 GRSKLKPRYALGFHQGCYGYSNRSDLEEVVEGYRDNNIPLDGLHVDVDFQDNYRTFTTNGGGFPNP--KEMFDNLHNKGL 78 (332)
T ss_pred CCCCCCchHHhhhhhCCCCCCCHHHHHHHHHHHHHcCCCCceEEEcCchhcCCCceeecCCCCCCH--HHHHHHHHHCCC
Confidence 899999999999999999999999999999999999999999999999999999999999999987 899999999999
Q ss_pred eEEEEecCCCCCCCChHHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeecc
Q 038998 384 RYVLILDPGISVNNSYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 384 k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dmn 463 (903)
|+++|++|+|+ .|.+||+.++||||+||++++||.++++.+++ .|+||||+|||
T Consensus 79 klv~~i~P~i~-------------------------~g~~~~~~~~~pDftnp~ar~wW~~~~~~l~~-~Gv~~~W~Dmn 132 (332)
T cd06601 79 KCSTNITPVIS-------------------------YGGGLGSPGLYPDLGRPDVREWWGNQYKYLFD-IGLEFVWQDMT 132 (332)
T ss_pred eEEEEecCcee-------------------------cCccCCCCceeeCCCCHHHHHHHHHHHHHHHh-CCCceeecCCC
Confidence 99999999998 14568888999999999999999999888775 79999999999
Q ss_pred ccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccc--------cCCcccccccchhhhhHHHHHHHHHHHH-
Q 038998 464 EISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALH--------YGNVTEYNVHSLYGLLEAKATRAALINA- 534 (903)
Q Consensus 464 Eps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h--------~~~~~~~~~HNlYg~~~~~at~~al~~~- 534 (903)
||++|+.... .+++|.++.+ .....|+++||+||+++++|+++++++.
T Consensus 133 Ep~~~~~~~~-----------------------~~~~p~~~~~~~~~~~~~~~~~~~~~~hN~Y~~~~~~a~~e~~~~~~ 189 (332)
T cd06601 133 TPAIMPSYGD-----------------------MKGFPPRLLVTDDSYENNVKRKPAIELWNLYSYNLHKATWHGLNNLN 189 (332)
T ss_pred CcccccCCCc-----------------------cCCCCCcccccCCccccccCCchHHHHhhhhHHHHHHHHHHHHHHhh
Confidence 9999864210 0111221111 2234789999999999999999999875
Q ss_pred --hCCCCEEEecccccCCCCcccccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCCC----------CChHHH
Q 038998 535 --VGKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRN----------TTEELC 602 (903)
Q Consensus 535 --~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~----------~~~EL~ 602 (903)
+++||||||||+|+|+|||+++|+|||.|+|++|+.+|+++|++||+||||||+|||||.|+ +++|||
T Consensus 190 ~~~~~RpfiltRS~~aGsqrY~~~WsGDn~stW~~L~~si~~~L~~~lsGip~~g~DIGGF~g~~~~~~~~~~~~~~EL~ 269 (332)
T cd06601 190 ARKNKRNFIIGRGSYAGMQRFAGLWTGDNSSSWDFLQINIAQVLNLGMSGLPIAGSDIGGFTSYDGENSIQRTWCNPELL 269 (332)
T ss_pred cCCCCCcEEEEecCcCccCCcCceeCCCcccCHHHHHHHHHHHHHhhhcCCCccCCccCCcCCCCcccccccCCCCHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999987 589999
Q ss_pred HHHHHhccccccccccCCCC--CCCccc-----------------cCchHHHHHHHHHHHHHH
Q 038998 603 RRWIQLGAFYPFARDHSDKF--KIRQEL-----------------YLWDSVAATARKVLGLRY 646 (903)
Q Consensus 603 ~RW~QlgaF~Pf~R~H~~~~--~~~qeP-----------------w~~~~~~~~~r~~i~lRY 646 (903)
+||+|+|||+||||+|+... +..||| |.|+++++++|++|++||
T Consensus 270 ~RW~Q~GaF~P~~R~H~~~~~~~~~~ep~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~~Ry 332 (332)
T cd06601 270 IRWYQAGFLLPWFRNHYDRKIRQKFQEPAKYFQEPYAHLIDYEQLYLYENVPEICRKYVELRY 332 (332)
T ss_pred HHHHHHhcCCceeccCCCCccCcccCCcccccccccccccccccccccHHHHHHHHHHHHhcC
Confidence 99999999999999999754 578888 778788999999999998
No 13
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=4.9e-78 Score=667.85 Aligned_cols=304 Identities=28% Similarity=0.520 Sum_probs=279.9
Q ss_pred CCCCCCCCcccccceeeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccC------CCCccccCCCCCChhHHHHHHHH
Q 038998 304 GRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMD------GYKDFTLDPINFPADQMKKFVDT 377 (903)
Q Consensus 304 G~p~lpP~WalG~~qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~------~~~dFt~d~~~FP~~~l~~~v~~ 377 (903)
|+|+|||+||||||||||+|.++++|++++++|++++||||+||+|++||+ .+++|+||+++||+| ++|+++
T Consensus 1 G~~~l~P~wa~G~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~~~~~~~f~wd~~~FPdp--~~mi~~ 78 (317)
T cd06598 1 GRQPLPPRWALGNWASRFGYRNWQEVDDTIKTLREKDFPLDAAILDLYWFGKDIDKGHMGNLDWDRKAFPDP--AGMIAD 78 (317)
T ss_pred CCCCCCchHHHHHHHhcCCCCCHHHHHHHHHHHHHhCCCceEEEEechhhcCcccCCceeeeEeccccCCCH--HHHHHH
Confidence 899999999999999999999999999999999999999999999999997 456999999999987 899999
Q ss_pred HHHcCceEEEEecCCCCCCCChHHHHHhHhCCeeeecC--CcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCC
Q 038998 378 LHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRD--GVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPL 455 (903)
Q Consensus 378 L~~~G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~--g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~ 455 (903)
||++|+|+++|++|+|+.+. +.|+++.++++++++. |+++.+.+|||.+++||||||+|++||.++++++. ..|+
T Consensus 79 L~~~G~k~~~~v~P~v~~~~--~~y~e~~~~g~l~~~~~~~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~-~~Gv 155 (317)
T cd06598 79 LAKKGVKTIVITEPFVLKNS--KNWGEAVKAGALLKKDQGGVPTLFDFWFGNTGLIDWFDPAAQAWFHDNYKKLI-DQGV 155 (317)
T ss_pred HHHcCCcEEEEEcCcccCCc--hhHHHHHhCCCEEEECCCCCEeeeeccCCCccccCCCCHHHHHHHHHHHHHhh-hCCc
Confidence 99999999999999998754 6899999999966543 78999999999999999999999999999999874 5899
Q ss_pred ceEEeeccccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhhHHHHHHHHHHHH-
Q 038998 456 DGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALINA- 534 (903)
Q Consensus 456 dg~W~DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~al~~~- 534 (903)
||||+|||||+.+.. +..|.++ .++++||+|++++++++++++++.
T Consensus 156 dg~w~D~~Ep~~~~~--------------------------------~~~~~~g-~~~~~hN~y~~~~~~~~~e~~~~~~ 202 (317)
T cd06598 156 TGWWGDLGEPEVHPP--------------------------------DMCHHKG-KAAEVHNIYGHLWAKSIYEGYQQNY 202 (317)
T ss_pred cEEEecCCCccccCC--------------------------------ccccCCC-cHhHHhhHHHHHHHHHHHHHHHHhc
Confidence 999999999987632 1223334 577899999999999999999875
Q ss_pred hCCCCEEEecccccCCCCcc-cccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCCC--CChHHHHHHHHhccc
Q 038998 535 VGKRPFMLTRSTFVSSGKYT-AHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRN--TTEELCRRWIQLGAF 611 (903)
Q Consensus 535 ~~~RpfilsRS~f~Gsqry~-~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~--~~~EL~~RW~QlgaF 611 (903)
+++|||+++||+|+|+|||+ ++|+||+.++|++|+.+|+++|++|++|+||+|+|||||.++ +++|||+||+|+|||
T Consensus 203 ~~~r~~~~~Rs~~~Gsqry~~~~WsGD~~s~W~~L~~~i~~~l~~~l~G~~~~g~DIGGf~~~~~~~~EL~~RW~q~g~f 282 (317)
T cd06598 203 PNERPFILMRAGFAGSQRYGVIPWSGDVGRTWDGLKSQPNAALQMSMSGIDYYHSDIGGFAGGDELDPELYTRWFQYGAF 282 (317)
T ss_pred CCCCeEEEEecCcCccccCcCCccCCCCcCCHHHHHHHHHHHHhhhccCCcccCCCcCCcCCCCCCCHHHHHHHHHhccC
Confidence 47899999999999999997 589999999999999999999999999999999999999998 999999999999999
Q ss_pred cccccccCCCCCCCccccCch-HHHHHHHHHHHHHH
Q 038998 612 YPFARDHSDKFKIRQELYLWD-SVAATARKVLGLRY 646 (903)
Q Consensus 612 ~Pf~R~H~~~~~~~qePw~~~-~~~~~~r~~i~lRY 646 (903)
+|+||+|+..+ .++|||.|+ ++.+++|++|++||
T Consensus 283 ~P~~R~H~~~~-~~~ePw~~~~~~~~~~r~~~~lRY 317 (317)
T cd06598 283 DPPFRPHAQNA-IPPEPVFYSIGTKNINRENIRLRY 317 (317)
T ss_pred CcccccCCCCC-CCCCCCcCChHHHHHHHHHHHhhC
Confidence 99999999975 578999998 67899999999998
No 14
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=4.3e-77 Score=659.12 Aligned_cols=303 Identities=27% Similarity=0.525 Sum_probs=284.1
Q ss_pred CCCCCCCCcccccceeeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccCCCC--ccccCCCCCChhHHHHHHHHHHHc
Q 038998 304 GRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYK--DFTLDPINFPADQMKKFVDTLHQN 381 (903)
Q Consensus 304 G~p~lpP~WalG~~qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~--dFt~d~~~FP~~~l~~~v~~L~~~ 381 (903)
|+|+|||+||||||||||+|.++++++++++++++++||||+||+|++|+++++ +|+||+++||++ ++|+++||++
T Consensus 1 G~~~l~P~wa~G~~~~~~~y~~~~~v~~~~~~~~~~~iP~d~~~lD~~w~~~~~~~~f~~d~~~FPd~--~~~i~~l~~~ 78 (308)
T cd06593 1 GRPALPPAWSFGLWLSRSFYYDEEEVNEFADGMRERNLPCDVIHLDCFWMKEFQWCDFEFDPDRFPDP--EGMLSRLKEK 78 (308)
T ss_pred CCCCCCchHHHHHHHHcccCCCHHHHHHHHHHHHHcCCCeeEEEEecccccCCcceeeEECcccCCCH--HHHHHHHHHC
Confidence 899999999999999999999999999999999999999999999999999877 999999999976 8999999999
Q ss_pred CceEEEEecCCCCCCCChHHHHHhHhCCeeeecC-CcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEe
Q 038998 382 GQRYVLILDPGISVNNSYETYIRGIEADIFIKRD-GVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWL 460 (903)
Q Consensus 382 G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~-g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~ 460 (903)
|+|+++|++|+|..++ +.|+++.++|+||++. |+++.+.+|||.++++|||||+|++||.++++++.+ .|+||+|+
T Consensus 79 G~~~~~~~~P~i~~~~--~~~~e~~~~g~~v~~~~g~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~-~Gid~~~~ 155 (308)
T cd06593 79 GFKVCLWINPYIAQKS--PLFKEAAEKGYLVKKPDGSVWQWDLWQPGMGIIDFTNPDACKWYKDKLKPLLD-MGVDCFKT 155 (308)
T ss_pred CCeEEEEecCCCCCCc--hhHHHHHHCCeEEECCCCCeeeecccCCCcccccCCCHHHHHHHHHHHHHHHH-hCCcEEec
Confidence 9999999999998754 5899999999999976 889999999999999999999999999999998875 89999999
Q ss_pred eccccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhhHHHHHHHHHHHHhC-CCC
Q 038998 461 DMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALINAVG-KRP 539 (903)
Q Consensus 461 DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~al~~~~~-~Rp 539 (903)
||||+. |.++.+++|..++++||+|++++++++++++++..+ +||
T Consensus 156 D~~e~~----------------------------------p~~~~~~~g~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~ 201 (308)
T cd06593 156 DFGERI----------------------------------PTDVVYYDGSDGEKMHNYYALLYNKAVYEATKEVKGEGEA 201 (308)
T ss_pred CCCCCC----------------------------------CccccccCCCCcceeeeHHHHHHHHHHHHHHHHhcCCCCe
Confidence 999962 223345566788999999999999999999998764 589
Q ss_pred EEEecccccCCCCcccccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCCCCChHHHHHHHHhccccccccccC
Q 038998 540 FMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRNTTEELCRRWIQLGAFYPFARDHS 619 (903)
Q Consensus 540 filsRS~f~Gsqry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~EL~~RW~QlgaF~Pf~R~H~ 619 (903)
|++|||+|+|+|||+++|+||+.++|++|+.+|+++|++|++|+|++|+|||||.+++++|||+||+|+|||+|+||+|+
T Consensus 202 ~~~~Rs~~~Gsqry~~~w~GD~~s~w~~L~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~EL~~RW~q~gaf~P~~r~h~ 281 (308)
T cd06593 202 VVWARSAWAGSQKYPVHWGGDCESTFEGMAESLRGGLSLGLSGFGFWSHDIGGFEGTPPPDLYKRWAQFGLLSSHSRLHG 281 (308)
T ss_pred EEEEcCCccccccCCCEECCCcccCHHHHHHHHHHHHhccccCCceecCccCCcCCCCCHHHHHHHHHhCcCCcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCccccCch-HHHHHHHHHHHHHHHh
Q 038998 620 DKFKIRQELYLWD-SVAATARKVLGLRYRL 648 (903)
Q Consensus 620 ~~~~~~qePw~~~-~~~~~~r~~i~lRY~L 648 (903)
.. .||||.|+ ++.+++|+++++||+|
T Consensus 282 ~~---~~~Pw~~~~~~~~~~r~~~~lRy~L 308 (308)
T cd06593 282 SG---YREPWEYGEEAVDVVRKFAKLKYRL 308 (308)
T ss_pred CC---CCCCcccChHHHHHHHHHHHHHhcC
Confidence 74 89999998 6889999999999997
No 15
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=100.00 E-value=1.1e-75 Score=649.53 Aligned_cols=301 Identities=30% Similarity=0.458 Sum_probs=269.8
Q ss_pred CCCCCCCCcccccceeeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccCCCC--ccccCCCCCChhHHHHHHHHHHHc
Q 038998 304 GRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYK--DFTLDPINFPADQMKKFVDTLHQN 381 (903)
Q Consensus 304 G~p~lpP~WalG~~qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~--dFt~d~~~FP~~~l~~~v~~L~~~ 381 (903)
|||+|||+||||||||||+|+++++|+++++++++++||||+||+|++|+.+++ +|+||+++||+| ++|+++||++
T Consensus 1 G~~~m~P~walG~~~sr~~y~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~~~~~~~f~~d~~~FPdp--~~mi~~L~~~ 78 (319)
T cd06591 1 GKAPMMPKWAYGFWQSKERYKTQEELLDVAKEYRKRGIPLDVIVQDWFYWPKQGWGEWKFDPERFPDP--KAMVRELHEM 78 (319)
T ss_pred CCCCCCchHHHHHHHhcccCCCHHHHHHHHHHHHHhCCCccEEEEechhhcCCCceeEEEChhhCCCH--HHHHHHHHHC
Confidence 899999999999999999999999999999999999999999999999999888 999999999976 8999999999
Q ss_pred CceEEEEecCCCCCCCChHHHHHhHhCCeeeecC-CcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEe
Q 038998 382 GQRYVLILDPGISVNNSYETYIRGIEADIFIKRD-GVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWL 460 (903)
Q Consensus 382 G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~-g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~ 460 (903)
|+|+++|++|+|+.+ ++.|++++++++|||+. |.++. .+|||.+++||||||+|++||.+++++.+..+|+||||+
T Consensus 79 G~kv~~~i~P~v~~~--~~~y~e~~~~g~~v~~~~g~~~~-~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~ 155 (319)
T cd06591 79 NAELMISIWPTFGPE--TENYKEMDEKGYLIKTDRGPRVT-MQFGGNTRFYDATNPEAREYYWKQLKKNYYDKGVDAWWL 155 (319)
T ss_pred CCEEEEEecCCcCCC--ChhHHHHHHCCEEEEcCCCCeee-eeCCCCccccCCCCHHHHHHHHHHHHHHhhcCCCcEEEe
Confidence 999999999999864 56899999999999987 67665 899999999999999999999988887666799999999
Q ss_pred eccccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhhHHHHHHHHHHHHh-CCCC
Q 038998 461 DMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALINAV-GKRP 539 (903)
Q Consensus 461 DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~al~~~~-~~Rp 539 (903)
|||||+.++.... +.+..+..+ +++++||+|++++++++++++++.. ++||
T Consensus 156 D~~Ep~~~~~~~~---------------------------~~~~~~~~~-~~~~~hN~y~~~~~~~~~e~~~~~~~~~r~ 207 (319)
T cd06591 156 DAAEPEYSVYDFG---------------------------LDNYRYHLG-PGLEVGNAYPLMHAKGIYEGQRAAGDEKRV 207 (319)
T ss_pred cCCCCCccCCccc---------------------------ccCcccCCC-CchhhhhhhHHHHHHHHHHHHHHhCCCCCc
Confidence 9999997743110 001111122 5778999999999999999998875 7999
Q ss_pred EEEecccccCCCCcc-cccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCCCCC---------hHHHHHHHHhc
Q 038998 540 FMLTRSTFVSSGKYT-AHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRNTT---------EELCRRWIQLG 609 (903)
Q Consensus 540 filsRS~f~Gsqry~-~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~---------~EL~~RW~Qlg 609 (903)
|+++||+|+|+|||+ .+|+||+.|+|++|+.+|+++|++||+|+||+|+|||||.|+++ +|||+||+|+|
T Consensus 208 f~~sRs~~~Gsqry~~~~W~GD~~s~w~~L~~~i~~~l~~glsG~~~~g~DiGGF~~~~~~~~~~~~~~~EL~~RW~q~g 287 (319)
T cd06591 208 VILTRSAWAGSQRYGALVWSGDIDSSWETLRRQIAAGLNMGLSGIPWWTTDIGGFFVGNPPAGLDDPEYRELYVRWFQFG 287 (319)
T ss_pred eEEEeccccccccccCceeCCCccccHHHHHHHHHHHHHHhhcCCccccCCcCCcCCCCccccccCCccHHHHHHHHHHh
Confidence 999999999999998 59999999999999999999999999999999999999998876 89999999999
Q ss_pred cccccccccCCCCC-CCccccCchH-HHHH
Q 038998 610 AFYPFARDHSDKFK-IRQELYLWDS-VAAT 637 (903)
Q Consensus 610 aF~Pf~R~H~~~~~-~~qePw~~~~-~~~~ 637 (903)
||+|+||+|+.... ..||||.|++ +.++
T Consensus 288 af~P~~R~H~~~~~~~~~ePw~~g~e~~~~ 317 (319)
T cd06591 288 AFCPVMRSHGTREPREINEFWSYGEEVYDI 317 (319)
T ss_pred cCccccccCCCCCCCCCCcCcCCChHHHHh
Confidence 99999999998664 3579999984 4444
No 16
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=2.8e-75 Score=645.82 Aligned_cols=303 Identities=29% Similarity=0.492 Sum_probs=269.4
Q ss_pred CCCCCCCCcccccceeeeCCCC-----HHHHHHHHHHhHhcCCCceEEEEeccccCC----CCccccCCCCCChhHHHHH
Q 038998 304 GRPAPMPYWSFGFHQCRYGYKN-----VSDLEAVVAGYAKAVIPLEVMWTDIDYMDG----YKDFTLDPINFPADQMKKF 374 (903)
Q Consensus 304 G~p~lpP~WalG~~qsr~gY~~-----~~~v~~vv~~~~~~~IP~D~iwlDidy~~~----~~dFt~d~~~FP~~~l~~~ 374 (903)
|+|+|||+||||||||||+|++ +++|+++++++++++||||+||+|++|++. +++|+||+++||+| ++|
T Consensus 1 G~~~mpP~walG~~~sr~~Y~~~~~~~q~~v~~~~~~~r~~~iP~d~i~ld~~~~~~~~~~~~~f~~d~~~FPdp--~~m 78 (317)
T cd06599 1 GKPAMVPRWSLGYSGSTMYYTELDPDAQEALLEFIDKCREHDIPCDSFHLSSGYTSIEGGKRYVFNWNKDRFPDP--AAF 78 (317)
T ss_pred CCCCCCchHHHHHHhcCCCCCCCCccHHHHHHHHHHHHHHcCCCeeEEEEeccccccCCCceeeeecCcccCCCH--HHH
Confidence 8999999999999999999998 899999999999999999999999999975 56899999999976 899
Q ss_pred HHHHHHcCceEEEEecCCCCCCCChHHHHHhHhCCeeeecC-C-cCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhcc
Q 038998 375 VDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRD-G-VPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDI 452 (903)
Q Consensus 375 v~~L~~~G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~-g-~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~ 452 (903)
+++||++|+|+++|++|+|..+ .+.|+++.++++||++. | .++++.+|+|.+++||||||+|++||.+++++.+..
T Consensus 79 i~~L~~~g~k~~~~i~P~i~~~--~~~y~e~~~~g~~v~~~~g~~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~ 156 (317)
T cd06599 79 VAKFHERGIRLAPNIKPGLLQD--HPRYKELKEAGAFIKPPDGREPSIGQFWGGVGSFVDFTNPEGREWWKEGVKEALLD 156 (317)
T ss_pred HHHHHHCCCEEEEEeCCcccCC--CHHHHHHHHCCcEEEcCCCCCcceecccCCCeEeecCCChHHHHHHHHHHHHHHhc
Confidence 9999999999999999999875 46899999999999975 4 568899999999999999999999999999776667
Q ss_pred CCCceEEeeccccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhhHHHHHHHHHH
Q 038998 453 LPLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALI 532 (903)
Q Consensus 453 ~g~dg~W~DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~al~ 532 (903)
+|+||||+|||||+.+.... .... .++ ...+.++||+|++++++|++++++
T Consensus 157 ~Gvdg~w~D~~E~~~~~~~~------------~~~~-------~g~----------~~~~~~~~n~y~~l~~~a~~~~~~ 207 (317)
T cd06599 157 LGIDSTWNDNNEYEIWDDDA------------VCDG-------FGK----------PGTIGELRPVQPNLMARASHEAQA 207 (317)
T ss_pred CCCcEEEecCCCCccCCCcc------------eecC-------CCC----------ccchhhcccchHHHHHHHHHHHHH
Confidence 89999999999997542100 0000 000 112345899999999999999998
Q ss_pred HH-hCCCCEEEecccccCCCCcccccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCCC-CChHHHHHHHHhcc
Q 038998 533 NA-VGKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRN-TTEELCRRWIQLGA 610 (903)
Q Consensus 533 ~~-~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~-~~~EL~~RW~Qlga 610 (903)
+. .++|||++|||+|+|+|||+++|+||+.++|++|+.+|+++|++||+|+||+|+|||||.++ +++|||+||+|+||
T Consensus 208 ~~~~~~r~f~ltRs~~~G~qry~~~WsGD~~s~W~~L~~~i~~~L~~glsG~~~~g~DIGGF~~~~~~~ELy~RW~Q~g~ 287 (317)
T cd06599 208 EHYPNRRPYIVSRSGFAGIQRYAQTWSGDNRTSWKTLRYNIAMGLGMGLSGVANIGHDIGGFAGPAPEPELFVRWVQNGI 287 (317)
T ss_pred HhCCCCCcEEEEcCCcccccCCcCeeCCCcccCHHHHHHHHHHHHhhhccCCcccccccCccCCCCCCHHHHHHHHHHcc
Confidence 76 57899999999999999999999999999999999999999999999999999999999986 79999999999999
Q ss_pred ccccccccCCCC-CCCccccCchHHHHHHH
Q 038998 611 FYPFARDHSDKF-KIRQELYLWDSVAATAR 639 (903)
Q Consensus 611 F~Pf~R~H~~~~-~~~qePw~~~~~~~~~r 639 (903)
|+|+||+|+..+ ..+||||.|++.++++|
T Consensus 288 F~P~~R~H~~~~~~~~~ePw~f~~~~~~~~ 317 (317)
T cd06599 288 FQPRFCIHSWNTDNTVTEPWMYPEVTDYIR 317 (317)
T ss_pred CCHhhhcccCCCCCCCcCCeecccchhhcC
Confidence 999999999764 36899999998777654
No 17
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ. CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=8.7e-75 Score=646.21 Aligned_cols=294 Identities=22% Similarity=0.370 Sum_probs=263.0
Q ss_pred CCCCCCCCcccccceeeeCCCCHHHHHHHHHHhHhcCCCceEEEEe-------------cccc--CCCC-----ccccCC
Q 038998 304 GRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTD-------------IDYM--DGYK-----DFTLDP 363 (903)
Q Consensus 304 G~p~lpP~WalG~~qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlD-------------idy~--~~~~-----dFt~d~ 363 (903)
|||+|||+||||||||||+|.++++|+++++++++++||||+||+| |+|| ++++ +|+|++
T Consensus 1 G~p~lpP~walG~~~sr~~Y~~~~ev~~v~~~~~~~~iP~d~i~lD~W~~~~~~~~w~d~~y~~~~~~~~~~~~~~~f~~ 80 (340)
T cd06597 1 GKPELLPKWAFGLWMSANEWDTQAEVMRQMDAHEEHGIPVTVVVIEQWSDEATFYVFNDAQYTPKDGGAPLSYDDFSFPV 80 (340)
T ss_pred CCCCCCchHHhhhhhhccCCCCHHHHHHHHHHHHHcCCCeeEEEEecccCcceeeeeccchhcccccCCcceecccccCc
Confidence 8999999999999999999999999999999999999999999775 7777 3434 455553
Q ss_pred -CCCChhHHHHHHHHHHHcCceEEEEecCCCCCCC-----ChHHHHHhHhCCeeeecC-CcCeee-eeeCCCccccCCCC
Q 038998 364 -INFPADQMKKFVDTLHQNGQRYVLILDPGISVNN-----SYETYIRGIEADIFIKRD-GVPYVG-QVWEGPLNFPDFVN 435 (903)
Q Consensus 364 -~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~-----~y~~y~~g~~~~~fvk~~-g~~~~g-~~WpG~~~~~Dftn 435 (903)
++||+| ++||++||++|+|+++|++|+|+.+. .+..|.+++++++|||+. |+++.+ .+|||.+++|||||
T Consensus 81 ~~~FPdp--~~mi~~Lh~~G~kv~l~v~P~i~~~~~~~~~~~~~~~~~~~~g~~vk~~~G~~~~~~~~W~g~~~~~Dftn 158 (340)
T cd06597 81 EGRWPNP--KGMIDELHEQGVKVLLWQIPIIKLRPHPHGQADNDEDYAVAQNYLVQRGVGKPYRIPGQWFPDSLMLDFTN 158 (340)
T ss_pred cccCCCH--HHHHHHHHHCCCEEEEEecCccccccccccccchhHHHHHHCCEEEEcCCCCccccccccCCCceeecCCC
Confidence 678866 99999999999999999999998532 234588999999999987 888875 69999999999999
Q ss_pred hHHHHHHHHHHHHHhccCCCceEEeeccccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccc
Q 038998 436 PATQTFWENEIKLFRDILPLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNV 515 (903)
Q Consensus 436 p~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~ 515 (903)
|+|++||.++++++++.+||||||+||||+. |. .+..|++|.+++++
T Consensus 159 p~a~~Ww~~~~~~~~~~~Gidg~w~D~~E~~-~~--------------------------------~~~~~~~g~~~~~~ 205 (340)
T cd06597 159 PEAAQWWMEKRRYLVDELGIDGFKTDGGEHV-WG--------------------------------RDLHFRDGRRGDEM 205 (340)
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEecCCCcc-CC--------------------------------CCceecCCCcHHHh
Confidence 9999999999999987799999999999974 31 11235566678899
Q ss_pred cchhhhhHHHHHHHHHHHHhCCCCEEEecccccCCCCcccccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCC
Q 038998 516 HSLYGLLEAKATRAALINAVGKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQR 595 (903)
Q Consensus 516 HNlYg~~~~~at~~al~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g 595 (903)
||+||+++++++++++++. ++||||+|||+|+|+|||+++|+|||.|+|++|+.+|+++|++||+|+||+|+|||||.|
T Consensus 206 hN~y~~~~~~~~~e~~~~~-~~r~filtRs~~~Gsqry~~~WsGD~~s~W~~L~~~i~~~L~~glsG~~~~g~DIgGF~g 284 (340)
T cd06597 206 RNTYPNHYVRAYNDFLRRA-KKDGVTFSRAGYTGAQAHGIFWAGDENSTFGAFRWSVFAGLSASASGIPYWGWDLAGFTG 284 (340)
T ss_pred hcccHHHHHHHHHHHHHhc-cCCcEEEEecccCccCCCcceecCCCCCCHHHHHHHHHHHHHHhhcCCCcCCCccCCcCC
Confidence 9999999999999988775 899999999999999999999999999999999999999999999999999999999999
Q ss_pred C-CChHHHHHHHHhccccccccccCCCCC-----CCccccCchH
Q 038998 596 N-TTEELCRRWIQLGAFYPFARDHSDKFK-----IRQELYLWDS 633 (903)
Q Consensus 596 ~-~~~EL~~RW~QlgaF~Pf~R~H~~~~~-----~~qePw~~~~ 633 (903)
+ +++|||+||+|+|||+|+||+|+..+. .+||||.|++
T Consensus 285 ~~~~~EL~~RW~Q~g~F~P~~R~H~~~~~~~~~~~~~epw~~~~ 328 (340)
T cd06597 285 DVPTAELYVRSTAMAAFVPIMQYHSEFNGHSSPNEDRTPWNIAE 328 (340)
T ss_pred CCCCHHHHHHHHHHhhcchhhhhccCCCCCCcCcCCccCCcccC
Confidence 8 899999999999999999999998754 5899999984
No 18
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation.
Probab=100.00 E-value=8.7e-74 Score=632.81 Aligned_cols=291 Identities=26% Similarity=0.426 Sum_probs=265.8
Q ss_pred CCCCCCCCcccccceeeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccCC---------CCccccCCCCCChhHHHHH
Q 038998 304 GRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDG---------YKDFTLDPINFPADQMKKF 374 (903)
Q Consensus 304 G~p~lpP~WalG~~qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~---------~~dFt~d~~~FP~~~l~~~ 374 (903)
|+++|||+||||+||||+.+ ++++|+++++++++++||||+||+| |||+. +++||||+++||+| ++|
T Consensus 1 G~~p~~P~wa~G~~~~~~~~-s~~~v~~~~~~~~~~~iP~d~i~ld-dw~~~~~~~~g~~~~~~f~~d~~~FPdp--~~m 76 (317)
T cd06594 1 GRQPELPDWAYGGAILGLQG-GTDKVLEALEKARAAGVKVAGLWLQ-DWTGRRETSFGDRLWWNWEWDPERYPGL--DEL 76 (317)
T ss_pred CCCCCCchhhhCcEEeeeeC-CHHHHHHHHHHHHHcCCCeeEEEEc-cccCcccccccceeeeeeEEChhhCCCH--HHH
Confidence 89999999999999999865 9999999999999999999999999 78762 23799999999976 899
Q ss_pred HHHHHHcCceEEEEecCCCCCCCChHHHHHhHhCCeeeecC-CcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccC
Q 038998 375 VDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRD-GVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDIL 453 (903)
Q Consensus 375 v~~L~~~G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~-g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~ 453 (903)
+++||++|+|+++|++|+|+.+.. ..|+++.++++|||+. |+++++.+|||.+++||||||+|++||.+++++++..+
T Consensus 77 i~~Lh~~G~~~~~~i~P~v~~~~~-~~y~~~~~~g~~vk~~~g~~~~~~~w~g~~~~~Dftnp~a~~ww~~~~~~~~~~~ 155 (317)
T cd06594 77 IEELKARGIRVLTYINPYLADDGP-LYYEEAKDAGYLVKDADGSPYLVDFGEFDCGVLDLTNPAARDWFKQVIKEMLLDL 155 (317)
T ss_pred HHHHHHCCCEEEEEecCceecCCc-hhHHHHHHCCeEEECCCCCeeeeccCCCCceeeecCCHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999997643 2379999999999987 89999999999999999999999999999999886679
Q ss_pred CCceEEeeccccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhhHHHHHHHHHHH
Q 038998 454 PLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALIN 533 (903)
Q Consensus 454 g~dg~W~DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~al~~ 533 (903)
|+||||+||||+. |.+..+++|..++++||+|++++++++++++++
T Consensus 156 Gvdg~w~D~~E~~----------------------------------p~d~~~~~g~~~~~~hN~y~~~~~~~~~~~~~~ 201 (317)
T cd06594 156 GLSGWMADFGEYL----------------------------------PFDAVLHSGEDAATMHNRYPELWAKLNREAVEE 201 (317)
T ss_pred CCcEEEecCCCCC----------------------------------CCcceecCCCCHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999999999952 123345566678999999999999999999988
Q ss_pred Hh-CCCCEEEecccccCCCCcc-cccCCCCcCchH---HHHHhHHHHHhcccccCCeEeeccCCCCC----CCChHHHHH
Q 038998 534 AV-GKRPFMLTRSTFVSSGKYT-AHWTGDNAATWD---DLAYTIPSILNFGLFGIPMVGADICGFQR----NTTEELCRR 604 (903)
Q Consensus 534 ~~-~~RpfilsRS~f~Gsqry~-~~WtGDn~s~W~---~L~~sI~~~L~~~l~Gip~~G~DIgGF~g----~~~~EL~~R 604 (903)
.. ++||||+|||+|+|+|||+ ++|+|||.|+|+ +|+.+|+++|++||+|+||+|+|||||.+ ++++|||+|
T Consensus 202 ~~~~~r~fvltRs~~~Gsqry~~~~WsGD~~s~W~~~~~L~~~i~~~L~~~lsG~~~~g~DIGGF~~~~~~~~~~EL~~R 281 (317)
T cd06594 202 AGKTGDILFFMRSGFTGSQKYSTLFWAGDQMVSWDAHDGLKSVVPGALSSGLSGYALHHSDIGGYTSLNGYVRTEELLLR 281 (317)
T ss_pred hccCCCeEEEEcccccccccccccccCCCCCCCCcCcccHHHHHHHHhhccccCCCcccCccCCCcCCCCCCCCHHHHHH
Confidence 64 6899999999999999998 589999999998 79999999999999999999999999975 589999999
Q ss_pred HHHhccccccccccCCCCCCCccccCchH
Q 038998 605 WIQLGAFYPFARDHSDKFKIRQELYLWDS 633 (903)
Q Consensus 605 W~QlgaF~Pf~R~H~~~~~~~qePw~~~~ 633 (903)
|+|+|||+|+||+|+...+..++||.+++
T Consensus 282 W~Q~gaF~P~~R~H~~~~~~~~~~~~~~~ 310 (317)
T cd06594 282 WAEMAAFTPVMRTHEGNRPDDNWQFYSDD 310 (317)
T ss_pred HHHHhccccceecCCCCCCCCCcccccCh
Confidence 99999999999999998888899999973
No 19
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=1.4e-70 Score=601.64 Aligned_cols=278 Identities=23% Similarity=0.361 Sum_probs=232.7
Q ss_pred hCCCCCCCCcccccceeeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccC---------CCCccccCCCCCChhHHHH
Q 038998 303 IGRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMD---------GYKDFTLDPINFPADQMKK 373 (903)
Q Consensus 303 tG~p~lpP~WalG~~qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~---------~~~dFt~d~~~FP~~~l~~ 373 (903)
||+|+|||+||||||||||+|.++++|+++++++|+++||||+||+|+||+. ++++||||+++||+| ++
T Consensus 1 TG~~~~~P~walG~~qsr~~y~s~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~~~~~~~~ft~d~~~FPdp--~~ 78 (292)
T cd06595 1 AGKIPLLPRYAFGNWWSRYWPYSDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSKYGSGWTGYSWNRKLFPDP--EK 78 (292)
T ss_pred CCCCCCCchHHHHhHhhCCcCCCHHHHHHHHHHHHHhCCCccEEEEecccccccccccccCCcceeEEChhcCCCH--HH
Confidence 7999999999999999999999999999999999999999999999999975 678999999999987 89
Q ss_pred HHHHHHHcCceEEEEecCCCCCCCChHHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccC
Q 038998 374 FVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDIL 453 (903)
Q Consensus 374 ~v~~L~~~G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~ 453 (903)
|+++||++|+|+|+|++|+|+++..++.|++.. ++..++ ...+ ...++|||||++++||.+.+++.+..+
T Consensus 79 mi~~Lh~~G~k~v~~v~P~~~~~~~~~~y~~~~-~~~~~~----~~~~-----~~~~~D~tnp~a~~~w~~~~~~~~~~~ 148 (292)
T cd06595 79 LLQDLHDRGLKVTLNLHPADGIRAHEDQYPEMA-KALGVD----PATE-----GPILFDLTNPKFMDAYFDNVHRPLEKQ 148 (292)
T ss_pred HHHHHHHCCCEEEEEeCCCcccCCCcHHHHHHH-HhcCCC----cccC-----CeEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999998766666776522 221111 1111 124679999999999988877766679
Q ss_pred CCceEEeeccccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhhHHHHHHHHHHH
Q 038998 454 PLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALIN 533 (903)
Q Consensus 454 g~dg~W~DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~al~~ 533 (903)
|+||||+|||||+.|... +..+...||.| .+++..+
T Consensus 149 Gidg~W~D~~E~~~~~~~-------------------------------------~~~~~~~~~~~-------~y~~~~~ 184 (292)
T cd06595 149 GVDFWWLDWQQGNRTRTP-------------------------------------GLDPLWWLNHV-------HYLDSAR 184 (292)
T ss_pred CCcEEEecCCCCcccccC-------------------------------------CcchHHHHHHH-------HHHHhhc
Confidence 999999999999765110 00011123322 3333333
Q ss_pred HhCCCCEEEecccccCCCCcccccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCC-CCChHHHHHHHHhcccc
Q 038998 534 AVGKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQR-NTTEELCRRWIQLGAFY 612 (903)
Q Consensus 534 ~~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g-~~~~EL~~RW~QlgaF~ 612 (903)
.++||||||||+|+|+|||+++|+|||.|+|++|+.+|+++|++|++|+||||+|||||.| ++++|||+||+|+|||+
T Consensus 185 -~~~r~f~lsRs~~~G~qry~~~WsGD~~s~W~~l~~~i~~~l~~~~sG~p~~g~DiGGF~~~~~~~ELy~RW~Q~gaf~ 263 (292)
T cd06595 185 -NGRRPLIFSRWAGLGSHRYPIGFSGDTIISWASLAFQPYFTATASNIGYGYWSHDIGGHMLGVTDPELYTRWIQFGVFS 263 (292)
T ss_pred -cCCCcEEEEeecccCCCcCCCccCCCcccCHHHHHHHHHHHHHHHhcCCCcCCCccCCCCCCCCCHHHHHHHHHHhhcc
Confidence 6799999999999999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred ccccccCCCCC-CCccccCchH-HHHH
Q 038998 613 PFARDHSDKFK-IRQELYLWDS-VAAT 637 (903)
Q Consensus 613 Pf~R~H~~~~~-~~qePw~~~~-~~~~ 637 (903)
|+||+|+.... .+||||.|++ +.++
T Consensus 264 P~~R~H~~~~~~~~~ePW~~g~~~~~~ 290 (292)
T cd06595 264 PILRLHSTKNPFNEKEPWLYEEEASKI 290 (292)
T ss_pred cccccCCCCCCCCCccCcccCcHHHHh
Confidence 99999998765 5899999984 4343
No 20
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=100.00 E-value=4.6e-66 Score=559.07 Aligned_cols=260 Identities=40% Similarity=0.698 Sum_probs=239.0
Q ss_pred CCCCCCCCcccccceeeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccCCCCcc--ccCCCCCChhHHHHHHHHHHHc
Q 038998 304 GRPAPMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDF--TLDPINFPADQMKKFVDTLHQN 381 (903)
Q Consensus 304 G~p~lpP~WalG~~qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dF--t~d~~~FP~~~l~~~v~~L~~~ 381 (903)
|+|+|||+||||||||||+|.++++|+++++++++++||+|+||+|++|+.++++| +||+++||+| ++|+++||++
T Consensus 1 G~p~~~P~wa~G~~~~~~~~~~~~~v~~~~~~~~~~~iP~d~~~lD~~~~~~~~~f~~~~d~~~Fpdp--~~~i~~l~~~ 78 (265)
T cd06589 1 GKPALPPKWAFGYWLSRYGYGDQDKVLEVIDGMRENDIPLDGFVLDDDYTDGYGDFTFDWDAGKFPNP--KSMIDELHDN 78 (265)
T ss_pred CCCCCCcHHHHHHHHhcCCCCCHHHHHHHHHHHHHcCCCccEEEECcccccCCceeeeecChhhCCCH--HHHHHHHHHC
Confidence 89999999999999999999999999999999999999999999999999999999 9999999976 8999999999
Q ss_pred CceEEEEecCCCCCCCChHHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEee
Q 038998 382 GQRYVLILDPGISVNNSYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLD 461 (903)
Q Consensus 382 G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~D 461 (903)
|+|+++|++|+| ++||.+++++++.++|+||||+|
T Consensus 79 g~~~~~~~~P~v---------------------------------------------~~w~~~~~~~~~~~~Gvdg~w~D 113 (265)
T cd06589 79 GVKLVLWIDPYI---------------------------------------------REWWAEVVKKLLVSLGVDGFWTD 113 (265)
T ss_pred CCEEEEEeChhH---------------------------------------------HHHHHHHHHHhhccCCCCEEecc
Confidence 999999999988 89999999988677999999999
Q ss_pred ccccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhhHHHHHHHHHHHHh-CCCCE
Q 038998 462 MNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALINAV-GKRPF 540 (903)
Q Consensus 462 mnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~al~~~~-~~Rpf 540 (903)
||||+.++... .+.... ++..++++||+|++++++++++++++.. ++|||
T Consensus 114 ~~E~~~~~~~~---------------------------~~~~~~--~~~~~~~~hn~y~~~~~~~~~~~~~~~~~~~r~~ 164 (265)
T cd06589 114 MGEPSPGDGNI---------------------------FTGGVV--GRVKHEEMHNAYPLLYAEATYEALRKNSKNKRPF 164 (265)
T ss_pred CCCCCcCCCcc---------------------------ccCCcC--CCccHHHHcchhHHHHHHHHHHHHHHhcCCCCeE
Confidence 99998774311 000000 2357889999999999999999999876 89999
Q ss_pred EEecccccCCCCcccccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCC-CCChHHHHHHHHhccccccccccC
Q 038998 541 MLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQR-NTTEELCRRWIQLGAFYPFARDHS 619 (903)
Q Consensus 541 ilsRS~f~Gsqry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g-~~~~EL~~RW~QlgaF~Pf~R~H~ 619 (903)
++|||+|+|+|||+++|+||+.++|+.|+.+|+++|++||+|+||+|+|||||.+ ++++|||+||+|+|+|+|+||+|+
T Consensus 165 ~~sRs~~~Gsqry~~~W~GD~~stW~~l~~~i~~~l~~~l~G~~~~g~DigGf~~~~~~~EL~~RW~Q~g~F~P~~R~H~ 244 (265)
T cd06589 165 ILSRSGYAGSQRYAGMWSGDNTSTWGYLRSQIPAGLTMSMSGIPFVGSDIGGFTGGDPSAELYVRWFQFGAFTPIMRFHS 244 (265)
T ss_pred EEEcCCcccccCcCceeCCcccCCHHHHHHHHHHHHhhhccCCcccCCCcCCCCCCCCCHHHHHHHHHHhcCCcceecCC
Confidence 9999999999999999999999999999999999999999999999999999999 899999999999999999999999
Q ss_pred CCCCCCccccCch-HHHHHHH
Q 038998 620 DKFKIRQELYLWD-SVAATAR 639 (903)
Q Consensus 620 ~~~~~~qePw~~~-~~~~~~r 639 (903)
......+|||.|+ ++.+++|
T Consensus 245 ~~~~~~~epw~~~~~~~~~~r 265 (265)
T cd06589 245 WNSPKDTEPWAFDEEVTAIIR 265 (265)
T ss_pred CCCCCCcCCCCcCHHHHHhhC
Confidence 9888899999998 5556554
No 21
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=3.3e-59 Score=514.39 Aligned_cols=278 Identities=24% Similarity=0.370 Sum_probs=244.8
Q ss_pred CCCCCcccccceeeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccCCCCccccCCCCCChhHHHHHHHHHHHcCceEE
Q 038998 307 APMPYWSFGFHQCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYV 386 (903)
Q Consensus 307 ~lpP~WalG~~qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v 386 (903)
...|.|...+ +...+.++++|+++++++++++||||+||+|++|++.+++|+||+++||++ ++|+++||++|+|++
T Consensus 12 ~~~p~W~~W~--~~~~~~s~~~v~~~~~~~~~~~iP~d~i~iD~~w~~~~g~f~~d~~~FPdp--~~mi~~l~~~G~k~~ 87 (303)
T cd06592 12 FRSPIWSTWA--RYKADINQETVLNYAQEIIDNGFPNGQIEIDDNWETCYGDFDFDPTKFPDP--KGMIDQLHDLGFRVT 87 (303)
T ss_pred hCCCccCChh--hhccCcCHHHHHHHHHHHHHcCCCCCeEEeCCCccccCCccccChhhCCCH--HHHHHHHHHCCCeEE
Confidence 5689999744 447788999999999999999999999999999999999999999999965 999999999999999
Q ss_pred EEecCCCCCCCChHHHHHhHhCCeeeecC-C-cCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeeccc
Q 038998 387 LILDPGISVNNSYETYIRGIEADIFIKRD-G-VPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMNE 464 (903)
Q Consensus 387 ~ivdP~I~~~~~y~~y~~g~~~~~fvk~~-g-~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~DmnE 464 (903)
+|++|+|+.++ +.|+++.++++||++. | .++.+.+|+|.+++||||||+|++||.+++++++..+|+||||+||||
T Consensus 88 l~i~P~i~~~s--~~~~e~~~~g~~vk~~~g~~~~~~~~w~g~~~~~Dftnp~a~~w~~~~~~~~~~~~Gvdg~w~D~~E 165 (303)
T cd06592 88 LWVHPFINTDS--ENFREAVEKGYLVSEPSGDIPALTRWWNGTAAVLDFTNPEAVDWFLSRLKSLQEKYGIDSFKFDAGE 165 (303)
T ss_pred EEECCeeCCCC--HHHHhhhhCCeEEECCCCCCCcccceecCCcceEeCCCHHHHHHHHHHHHHHHHHhCCcEEEeCCCC
Confidence 99999998754 6899999999999987 5 788999999999999999999999999999999877999999999999
Q ss_pred cccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhhHHHHHHHHHHHHhCCCCEEEec
Q 038998 465 ISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATRAALINAVGKRPFMLTR 544 (903)
Q Consensus 465 ps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~al~~~~~~RpfilsR 544 (903)
|+.+. .++.+. .+...||.|..+++++..+ .+||+++|
T Consensus 166 ~~~~p--------------------------------~~~~~~---~~~~~~n~y~~~~~~~~~~-------~~~~~~~R 203 (303)
T cd06592 166 ASYLP--------------------------------QDYVTE---DPLLNPDEYTRLYAEMVAE-------FGDLIEVR 203 (303)
T ss_pred cccCC--------------------------------cccccC---CcccCHHHHHHHHHHHHHh-------hccceEEE
Confidence 97331 111222 1235799999888887643 24999999
Q ss_pred ccccCCCCcccccCCCCcCchHHH---HHhHHHHHhcccccCCeEeec-cCCCCC-------CCChHHHHHHHHhccccc
Q 038998 545 STFVSSGKYTAHWTGDNAATWDDL---AYTIPSILNFGLFGIPMVGAD-ICGFQR-------NTTEELCRRWIQLGAFYP 613 (903)
Q Consensus 545 S~f~Gsqry~~~WtGDn~s~W~~L---~~sI~~~L~~~l~Gip~~G~D-IgGF~g-------~~~~EL~~RW~QlgaF~P 613 (903)
|+|+|+|+++++|+||+.|+|++| +.+|+++|++||+|+||||+| ||||.+ .+++|||+||+|+|||+|
T Consensus 204 sg~~g~~~~~~~w~GD~~s~W~~~~gl~~~i~~~L~~~lsG~~~w~~D~iGGf~~~~~~~~~~~~~EL~~RW~q~g~f~P 283 (303)
T cd06592 204 AGWRSQGLPLFVRMMDKDSSWGGDNGLKSLIPTALTMGLLGYPFVLPDMIGGNAYGGNSDDELPDKELYIRWLQLSAFLP 283 (303)
T ss_pred eeeecCCCCeeEEcCCCCCCCCCCcCHHHHHHHHHHhhccCCcccCCCccCCccccccccCCCCCHHHHHHHHHHHHhCh
Confidence 999999999999999999999887 999999999999999999999 899975 478999999999999999
Q ss_pred cccccCCCCCCCccccCch-HHHHHHH
Q 038998 614 FARDHSDKFKIRQELYLWD-SVAATAR 639 (903)
Q Consensus 614 f~R~H~~~~~~~qePw~~~-~~~~~~r 639 (903)
+||+| +|||.|+ ++.+++|
T Consensus 284 ~~R~h-------~~PW~~~~e~~~~~~ 303 (303)
T cd06592 284 VMQFS-------IAPWQYDDEVVEIAK 303 (303)
T ss_pred hhhcc-------cCCccCCHHHHHhhC
Confidence 99999 5899998 5555543
No 22
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain. The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=100.00 E-value=1.5e-47 Score=400.59 Aligned_cols=239 Identities=26% Similarity=0.457 Sum_probs=195.9
Q ss_pred CCCCCCCCccccc--cee----eeCC---------------CCHHHHHHHHHHhHhcCCCceEEEEeccccCCCCccccC
Q 038998 304 GRPAPMPYWSFGF--HQC----RYGY---------------KNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLD 362 (903)
Q Consensus 304 G~p~lpP~WalG~--~qs----r~gY---------------~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dFt~d 362 (903)
|+|.|||+|||++ --| -|.+ ..+..+++|+++|+++++|+.-|.-+..|-.++
T Consensus 1 g~p~~~p~~a~~~g~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~y~~~~~plgw~lpndgyg~~y------ 74 (261)
T cd06596 1 GRPFLLPEYALYLGDADCYNRDYWRKVPEGTSDGGLNGEKESTTDDARKVADKYKENDMPLGWMLPNDGYGCGY------ 74 (261)
T ss_pred CCCccchHHHHhccchhhhccCccccCCCccccccCCCCcccchhhHHHHHHHHHhcCCCceeeccCCCCcchH------
Confidence 8999999999853 222 2332 234678999999999999999998887877766
Q ss_pred CCCCChhHHHHHHHHHHHcCceEEEEecCCCCCCCChHHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHH
Q 038998 363 PINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFW 442 (903)
Q Consensus 363 ~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww 442 (903)
.+|+++++.++++|++.-+|..-.+
T Consensus 75 ------~~l~~~~~~~~~~g~~~glwt~~~l------------------------------------------------- 99 (261)
T cd06596 75 ------ENLKEVVDYLHANGVETGLWTQSGL------------------------------------------------- 99 (261)
T ss_pred ------HHHHHHHHHHHHcCCccccccccch-------------------------------------------------
Confidence 2789999999999999888732111
Q ss_pred HHHHHHHhccCCCceEEeeccccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhh
Q 038998 443 ENEIKLFRDILPLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLL 522 (903)
Q Consensus 443 ~~~~~~~~~~~g~dg~W~DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~ 522 (903)
..+++-....|+...+.|-. +.|. +=.|++.
T Consensus 100 -~~~~~ev~~~g~~~~k~Dv~------------------------------------------w~g~------gy~~~l~ 130 (261)
T cd06596 100 -RDIAKEVGAAGVRARKTDVA------------------------------------------WVGA------GYSFALN 130 (261)
T ss_pred -hhhhhhhccCCceEEeccch------------------------------------------hhcc------chhHHHH
Confidence 00111011223444444311 1110 1136888
Q ss_pred HHHHHHHHHHHHhCCCCEEEecccccCCCCcccccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCCCCChHHH
Q 038998 523 EAKATRAALINAVGKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRNTTEELC 602 (903)
Q Consensus 523 ~~~at~~al~~~~~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~EL~ 602 (903)
+++++++++++.+++||||||||+|+|+|||+++|+|||.++|++|+.+|+++|++||+|+||+|+|||||+|+ ++|||
T Consensus 131 ~~ka~yeg~~~~~~~RpfiltRsg~aGsQRy~~~WsGD~~stWe~Lr~sI~~~L~~gLsG~p~~G~DIGGF~g~-~~EL~ 209 (261)
T cd06596 131 GVKAAADGIESNSNARPFIVTVDGWAGTQRYAGIWTGDQSGSWEYIRFHIPTYIGSGLSGQPNTTSDVDGIFGG-SPETY 209 (261)
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCccccCCCCCccCCCCcCcHHHHHHHHHHHHHHHhcCCCcCccccCcCCCC-CHHHH
Confidence 99999999998888999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HHHHHhccccccccccCCCCCCCccccCch-HHHHHHHHHHHHHHHhHHHHH
Q 038998 603 RRWIQLGAFYPFARDHSDKFKIRQELYLWD-SVAATARKVLGLRYRLLPYFY 653 (903)
Q Consensus 603 ~RW~QlgaF~Pf~R~H~~~~~~~qePw~~~-~~~~~~r~~i~lRY~LLPYlY 653 (903)
+||+|+|||+|+||+|+..++.+||||.|+ ++.+++|++|++||+||||||
T Consensus 210 vRW~Q~gaF~P~~R~h~~~~~~~rEPW~fge~~~~i~R~~l~LRY~LlPYiY 261 (261)
T cd06596 210 TRDLQWKAFTPVLMTMSGWAANDKQPWVFGEPYTSINRDYLKLKMRLMPYIY 261 (261)
T ss_pred HHHHHHHHhhhhhhhccCCCCCCCCCeeCCHHHHHHHHHHHHHHHHhhCccC
Confidence 999999999999999999888999999998 677999999999999999998
No 23
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=99.29 E-value=4e-11 Score=136.34 Aligned_cols=167 Identities=20% Similarity=0.316 Sum_probs=112.4
Q ss_pred eCCCHHHHHHHHHHHhCCCCCCCCcc-----cccceeee----CCCCHHHHHHHHHHhHhcCCCceEEEEeccccC----
Q 038998 288 AGPSPDSVIQQYTEFIGRPAPMPYWS-----FGFHQCRY----GYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMD---- 354 (903)
Q Consensus 288 ~G~~p~~vi~qY~~ltG~p~lpP~Wa-----lG~~qsr~----gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~---- 354 (903)
......++-++|+++.-+-.+++.|. .| .|.| .--+++.+++.++.+++.|+ +.+.+|..|..
T Consensus 12 s~~gl~~~s~~~h~~~r~~~~~~~~~~~~~pv~--~nsW~~~~~d~~e~~i~~~a~~~~~~G~--e~fviDDGW~~~r~~ 87 (394)
T PF02065_consen 12 SDQGLNGMSQRFHRFVRRHLLRPPWRDKPPPVG--WNSWEAYYFDITEEKILELADAAAELGY--EYFVIDDGWFGGRDD 87 (394)
T ss_dssp ESBHHHHHHHHHHHHHHHHTSTTTTTTSS--EE--EESHHHHTTG--HHHHHHHHHHHHHHT---SEEEE-SSSBCTEST
T ss_pred ecCCHHHHHHHHHHHHHHhcCCCccCCCCCceE--EEcccccCcCCCHHHHHHHHHHHHHhCC--EEEEEcCccccccCC
Confidence 33457788888887733221111111 12 2333 22378899999999988765 89999999984
Q ss_pred ---CCCccccCCCCCChhHHHHHHHHHHHcCceEEEEecCCCCCCCChHHHHHhHhCCeeeecCCcCeeeeeeCCCcccc
Q 038998 355 ---GYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFP 431 (903)
Q Consensus 355 ---~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~ 431 (903)
+.+||+.|+++||+ +|+.+++++|++|+|+.+|+.|.+....+ ..|.+ ..+++++.++.+.. ......++
T Consensus 88 d~~~~GdW~~~~~kFP~-Gl~~l~~~i~~~Gmk~GlW~ePe~v~~~S-~l~~~--hPdw~l~~~~~~~~---~~r~~~vL 160 (394)
T PF02065_consen 88 DNAGLGDWEPDPKKFPN-GLKPLADYIHSLGMKFGLWFEPEMVSPDS-DLYRE--HPDWVLRDPGRPPT---LGRNQYVL 160 (394)
T ss_dssp TTSTTSBECBBTTTSTT-HHHHHHHHHHHTT-EEEEEEETTEEESSS-CHCCS--SBGGBTCCTTSE-E---CBTTBEEB
T ss_pred CcccCCceeEChhhhCC-cHHHHHHHHHHCCCeEEEEeccccccchh-HHHHh--CccceeecCCCCCc---CcccceEE
Confidence 35889999999997 79999999999999999999998753221 23322 23455554432211 11234579
Q ss_pred CCCChHHHHHHHHHHHHHhccCCCceEEeecccc
Q 038998 432 DFVNPATQTFWENEIKLFRDILPLDGLWLDMNEI 465 (903)
Q Consensus 432 Dftnp~a~~ww~~~~~~~~~~~g~dg~W~DmnEp 465 (903)
|++||++++|..+.+.+++.+.|+|++++|||..
T Consensus 161 D~~~pev~~~l~~~i~~ll~~~gidYiK~D~n~~ 194 (394)
T PF02065_consen 161 DLSNPEVRDYLFEVIDRLLREWGIDYIKWDFNRD 194 (394)
T ss_dssp -TTSHHHHHHHHHHHHHHHHHTT-SEEEEE-TS-
T ss_pred cCCCHHHHHHHHHHHHHHHHhcCCCEEEeccccC
Confidence 9999999999999999988889999999999964
No 24
>PF13802 Gal_mutarotas_2: Galactose mutarotase-like; PDB: 1XSI_F 1XSK_D 1WE5_E 2F2H_F 1XSJ_F 2G3N_C 2G3M_F 3POC_A 3MKK_A 3PHA_A ....
Probab=99.23 E-value=1.6e-11 Score=105.53 Aligned_cols=65 Identities=35% Similarity=0.551 Sum_probs=44.1
Q ss_pred CCceEecCcccCCCCccCCCCCceEEEeeccccccc--cCCCCccccceEEEecCCCCceEEEEeecCCCcee
Q 038998 196 SAHLYGLGEHTKKSLKLTPNSNDTLTLWNADLFAAY--LDVNLYGSHPFYIDVRSPNGTTHGVLLLNSNGMDV 266 (903)
Q Consensus 196 ~~~~YGlGE~~~~~~~l~~~~~~~~~l~n~D~~~~~--~~~~lYgs~Pf~~~~~~~~g~~~Gvf~~Ns~~~dv 266 (903)
+|++||||||.+. +.++ + +++++||+|.+.+. ...++|++|||+|++++ +..+|||++|+..+.+
T Consensus 1 de~~yGlGE~~~~-l~~~-g--~~~~~~n~D~~~~~~~~~~~lY~siPf~~~~~s--~~~yGvf~dn~~~~~~ 67 (68)
T PF13802_consen 1 DERFYGLGERFGP-LNRR-G--KRYRLWNTDAFGYNGPSSDPLYKSIPFFIAHRS--GKGYGVFFDNPSRTFF 67 (68)
T ss_dssp T-EEEEESS-SS--SS-T-T--EEEEE-B---TSS-GTTBS-BSEEEEEEEEEEC--TCEEEEEEE-SS-EEE
T ss_pred CCcEEcccccCCC-cccC-C--cEEEEEECcCCCcCCCcCccccccEeEEEEeCC--CCEEEEEEeCCCceEE
Confidence 4899999999974 4432 4 89999999998653 35789999999999886 6789999999998765
No 25
>COG3345 GalA Alpha-galactosidase [Carbohydrate transport and metabolism]
Probab=98.66 E-value=4.7e-07 Score=103.01 Aligned_cols=300 Identities=15% Similarity=0.176 Sum_probs=186.7
Q ss_pred EeCCCHHHHHHHHHHHhCCCCCCCCccc---ccceeee-CCC---CHHHHHHHHHHhHhcCCCceEEEEeccccC-----
Q 038998 287 FAGPSPDSVIQQYTEFIGRPAPMPYWSF---GFHQCRY-GYK---NVSDLEAVVAGYAKAVIPLEVMWTDIDYMD----- 354 (903)
Q Consensus 287 f~G~~p~~vi~qY~~ltG~p~lpP~Wal---G~~qsr~-gY~---~~~~v~~vv~~~~~~~IP~D~iwlDidy~~----- 354 (903)
..++....+.+.|++++++-.+|--|+= =-+.|.| +|. +++++.+.++..++ ++++.+.+|..|..
T Consensus 262 ~edqgl~~lsq~y~~~v~~~i~~~~~~~kprPi~~nsWea~Yfd~t~e~ile~vk~akk--~gvE~FvlDDGwfg~rndd 339 (687)
T COG3345 262 LEDQGLNGLSQKYAELVRMEIVPRPRVKKPRPIGWNSWEAYYFDFTEEEILENVKEAKK--FGVELFVLDDGWFGGRNDD 339 (687)
T ss_pred EcCCCcchHHHHHHHHHHhhcCcccccCCCCcceeeceeeeeecCCHHHHHHHHHHHhh--cCeEEEEEccccccccCcc
Confidence 4488899999999999998877723331 1234454 443 78889898888766 45899999999994
Q ss_pred --CCCccccCCCCCChhHHHHHHHHHHHcCceEEEEecCCCCCCCChHHHHHhHhCCeeeecCCcCeeeeeeCCCccccC
Q 038998 355 --GYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPD 432 (903)
Q Consensus 355 --~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~D 432 (903)
.-+||-.+.++||. ++.++++.++++|+++.+|+.|.+...+ -..|.+ ..|++||-+|.|.... -.....|
T Consensus 340 ~~slGDWlv~seKfPs-giE~li~~I~e~Gl~fGIWlePemvs~d-Sdlfrq--HPDWvvk~~G~p~~~~---Rnqyvl~ 412 (687)
T COG3345 340 LKSLGDWLVNSEKFPS-GIEELIEAIAENGLIFGIWLEPEMVSED-SDLFRQ--HPDWVVKVNGYPLMAG---RNQYVLW 412 (687)
T ss_pred hhhhhceecchhhccc-cHHHHHHHHHHcCCccceeecchhcccc-hHHHhh--CCCeEEecCCcccccc---ccchhhh
Confidence 45789999999996 6899999999999999999999976543 257765 6899999888775421 1345678
Q ss_pred CCChHHHHHHHHHHHHHhccCCCceEEeeccccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCccc
Q 038998 433 FVNPATQTFWENEIKLFRDILPLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTE 512 (903)
Q Consensus 433 ftnp~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~ 512 (903)
+.||.....-.+.+..++-...+|.++-|||-- -|. ++. +++. +++ + ..
T Consensus 413 ~s~p~vv~~l~~~l~qll~~~~v~ylkwdmnr~-l~k---------lg~-~~~~------------~l~-------q-qr 461 (687)
T COG3345 413 LSNPIVVLDLSEDLVQLLLFHLVSYLKWDMNRE-LFK---------LGF-LFWG------------ALP-------Q-QR 461 (687)
T ss_pred ccChHHHHHhhhHHHHHHHhhhHHHHHHHhCcc-eee---------cCC-CCCc------------ccc-------c-hH
Confidence 888888877766655544445678888888831 111 110 0110 000 0 01
Q ss_pred ccccchhhhhHHHHHHHHHHHHhCCCCEEEecccccCCCCcc--------cccCCCCcCchHHHHHhHHHHHhcccccCC
Q 038998 513 YNVHSLYGLLEAKATRAALINAVGKRPFMLTRSTFVSSGKYT--------AHWTGDNAATWDDLAYTIPSILNFGLFGIP 584 (903)
Q Consensus 513 ~~~HNlYg~~~~~at~~al~~~~~~RpfilsRS~f~Gsqry~--------~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip 584 (903)
|. | |+-+....-+-|-|+--|+-.|.+|+- ..|.-|+...=+-++.+ -+ .+ .=+|
T Consensus 462 y~---l---------y~l~~~l~~k~~~i~FeScasGg~r~d~gml~~~~~~w~Sd~~dAi~r~~iq--rg--~s-~~~P 524 (687)
T COG3345 462 YQ---L---------YRLFDQLNLKFPHILFESCASGGERIDKGMLEYSPQLWCSDLTDAIGRLDIQ--RG--GS-YTYP 524 (687)
T ss_pred HH---H---------HHHHHHhhhcCCCchhhhhcccccccchHHhhhcccccCCCCcchhhhcccc--cc--Cc-ccCC
Confidence 11 1 222333445677788888888877762 47988876433333221 11 11 1234
Q ss_pred --eEeeccCCCCCCCChHHHHHHHHhccccc---cccccCCCCCCCccccCch-HHHHHHHHHHHHHHHhHHHH
Q 038998 585 --MVGADICGFQRNTTEELCRRWIQLGAFYP---FARDHSDKFKIRQELYLWD-SVAATARKVLGLRYRLLPYF 652 (903)
Q Consensus 585 --~~G~DIgGF~g~~~~EL~~RW~QlgaF~P---f~R~H~~~~~~~qePw~~~-~~~~~~r~~i~lRY~LLPYl 652 (903)
++|+-|++ .|.. -+|||---.+-- +|++-.. .-++-.-. +..+.+.+.+.+...|-|-+
T Consensus 525 ~~~mGaHi~~---~p~h--~~~rm~~l~~rg~~a~~g~~g~----elD~~~lsdeek~~~akqialyke~r~vl 589 (687)
T COG3345 525 PESMGAHISA---VPNH--QARRMTSLETRGLVAHFGFWGY----ELDCTILSDEEKDLTAKQIALYKELRPVL 589 (687)
T ss_pred hHHhhhhccC---CCcH--HHhhhhhhhhhhHHHHhhhhcc----CCCcccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 67777764 2332 457775433322 2222111 11222222 45678888887766665543
No 26
>PLN03231 putative alpha-galactosidase; Provisional
Probab=98.33 E-value=1.6e-05 Score=89.16 Aligned_cols=131 Identities=12% Similarity=0.078 Sum_probs=89.2
Q ss_pred CHHHHHHHHHHhHhcC---CCceEEEEeccccC--------------------CCCccccCCCCCCh----hHHHHHHHH
Q 038998 325 NVSDLEAVVAGYAKAV---IPLEVMWTDIDYMD--------------------GYKDFTLDPINFPA----DQMKKFVDT 377 (903)
Q Consensus 325 ~~~~v~~vv~~~~~~~---IP~D~iwlDidy~~--------------------~~~dFt~d~~~FP~----~~l~~~v~~ 377 (903)
+++++++.++ +-+.+ .-.+-|.+|+.|+. .++.+..|+++||+ .+|+.+.+.
T Consensus 16 ~E~~i~~~Ad-~v~~gL~~~GY~Yv~iDd~W~~~~~~g~~~~~~~~~~~~~~d~~G~l~pd~~rFPs~~~~~G~k~lADy 94 (357)
T PLN03231 16 SEEQFLENAK-IVSETLKPHGYEYVVIDYLWYRKLKHGWFKTSAKSPGYDLIDKWGRPLPDPKRWPSTTGGKGFAPIAAK 94 (357)
T ss_pred CHHHHHHHHH-HHHcchHHhCCEEEEECCcccccccccccccccccccccccCCCCCcccCcccCCCCccccCcHHHHHH
Confidence 7888888776 43433 24478899988863 45678899999995 369999999
Q ss_pred HHHcCceEEEEecCCCCCCC---ChHHHH-Hh------HhCCeeeecCCcCeeeeeeC-CCccccCCCChHHHHHHHHHH
Q 038998 378 LHQNGQRYVLILDPGISVNN---SYETYI-RG------IEADIFIKRDGVPYVGQVWE-GPLNFPDFVNPATQTFWENEI 446 (903)
Q Consensus 378 L~~~G~k~v~ivdP~I~~~~---~y~~y~-~g------~~~~~fvk~~g~~~~g~~Wp-G~~~~~Dftnp~a~~ww~~~~ 446 (903)
+|++|.|+-+.++|++.... .++..- .| ...|+.+.. ....|. ..-..+|..+|.+++|.....
T Consensus 95 vHs~GLKfGIY~~~G~~tca~~~~~pi~G~~Gs~g~~~~a~Dia~~~-----~~c~~~~~~~~~v~~~~~gaq~y~~~~a 169 (357)
T PLN03231 95 VHALGLKLGIHVMRGISTTAVKKKTPILGAFKSNGHAWNAKDIALMD-----QACPWMQQCFVGVNTSSEGGKLFIQSLY 169 (357)
T ss_pred HHhCCcceEEEecCCccchhcccCCccCCCCcccccccchhhhcccc-----ccccccccccccccccchhHHHHHHHHH
Confidence 99999999999999987532 111000 00 001111111 112232 222368999999999998877
Q ss_pred HHHhccCCCceEEeec
Q 038998 447 KLFRDILPLDGLWLDM 462 (903)
Q Consensus 447 ~~~~~~~g~dg~W~Dm 462 (903)
+.|- +.|||.++.|.
T Consensus 170 ~~fA-~WGVDylK~D~ 184 (357)
T PLN03231 170 DQYA-SWGIDFIKHDC 184 (357)
T ss_pred HHHH-HhCCCEEeecc
Confidence 7665 69999999994
No 27
>PLN02229 alpha-galactosidase
Probab=98.22 E-value=2e-05 Score=90.03 Aligned_cols=88 Identities=16% Similarity=0.251 Sum_probs=68.1
Q ss_pred hCCCCCCCCcccccceeeeCCC---CHHHHHHHHHHhHhcCCC---ceEEEEeccccC----CCCccccCCCCCChhHHH
Q 038998 303 IGRPAPMPYWSFGFHQCRYGYK---NVSDLEAVVAGYAKAVIP---LEVMWTDIDYMD----GYKDFTLDPINFPADQMK 372 (903)
Q Consensus 303 tG~p~lpP~WalG~~qsr~gY~---~~~~v~~vv~~~~~~~IP---~D~iwlDidy~~----~~~dFt~d~~~FP~~~l~ 372 (903)
-|....|| +|+. |...|. +++.+++.++.+.+.|+. ++-|.+|..|+. ..+++..|+++||+ +|+
T Consensus 57 ngla~tPp---mGWn-SWn~~~~~i~E~~i~~~ad~~v~~Gl~~~Gy~yv~iDDgW~~~~rd~~G~l~~d~~rFP~-G~k 131 (427)
T PLN02229 57 NGLARTPQ---MGWN-SWNFFACNINETVIKETADALVSTGLADLGYIHVNIDDCWSNLKRDSKGQLVPDPKTFPS-GIK 131 (427)
T ss_pred CCccCCCC---ceEE-chhhhCcccCHHHHHHHHHHHHHhHHHhCCCEEEEEcCCcCCCCcCCCCCEEEChhhcCC-cHH
Confidence 45556666 3543 222222 788999999987555443 688999999974 35678999999997 799
Q ss_pred HHHHHHHHcCceEEEEecCCCCC
Q 038998 373 KFVDTLHQNGQRYVLILDPGISV 395 (903)
Q Consensus 373 ~~v~~L~~~G~k~v~ivdP~I~~ 395 (903)
.+.+.+|++|+|+.++.|+++..
T Consensus 132 ~ladyiH~~GlKfGIy~d~G~~T 154 (427)
T PLN02229 132 LLADYVHSKGLKLGIYSDAGVFT 154 (427)
T ss_pred HHHHHHHHCCCceEEeccCCCcc
Confidence 99999999999999999999874
No 28
>PLN02692 alpha-galactosidase
Probab=98.21 E-value=3.6e-05 Score=87.63 Aligned_cols=129 Identities=15% Similarity=0.193 Sum_probs=90.6
Q ss_pred HHHHHHHHHhCCCCCCCCcccccceeeeCCC---CHHHHHHHHHHhHhcCC---CceEEEEeccccC----CCCccccCC
Q 038998 294 SVIQQYTEFIGRPAPMPYWSFGFHQCRYGYK---NVSDLEAVVAGYAKAVI---PLEVMWTDIDYMD----GYKDFTLDP 363 (903)
Q Consensus 294 ~vi~qY~~ltG~p~lpP~WalG~~qsr~gY~---~~~~v~~vv~~~~~~~I---P~D~iwlDidy~~----~~~dFt~d~ 363 (903)
++.+....--|....|| +||. |.+.|. +++.+++.++.+.+.++ .++-|.+|..|+. ..+.+..|+
T Consensus 41 ~~~~~~~~~ngla~tPp---mGWn-SW~~~~~~i~E~~i~~~ad~~~~~gl~~~Gy~yv~iDDgW~~~~rd~~G~~~~d~ 116 (412)
T PLN02692 41 EILRRNLLANGLGITPP---MGWN-SWNHFSCKIDEKMIKETADALVSTGLSKLGYTYVNIDDCWAEIARDEKGNLVPKK 116 (412)
T ss_pred hhhhhhcccCcCcCCCc---ceEE-chhhhCcccCHHHHHHHHHHHHhccchhcCcEEEEEcCCcCCCCCCCCCCeeeCh
Confidence 44443333456666677 3542 222232 78899999998877655 4789999999974 456789999
Q ss_pred CCCChhHHHHHHHHHHHcCceEEEEecCCCCCCCChHHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHH
Q 038998 364 INFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWE 443 (903)
Q Consensus 364 ~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~ 443 (903)
++||+ +|+.+++.+|++|+|+.++.+++...-. | ..|.+..+..
T Consensus 117 ~kFP~-G~k~ladyiH~~GLKfGIy~d~G~~tC~--------------------------~---------~~pGS~g~e~ 160 (412)
T PLN02692 117 STFPS-GIKALADYVHSKGLKLGIYSDAGYFTCS--------------------------K---------TMPGSLGHEE 160 (412)
T ss_pred hhcCC-cHHHHHHHHHHCCCceEEEecCCccccC--------------------------C---------CCCCchHHHH
Confidence 99997 7999999999999999999998753210 0 1233455555
Q ss_pred HHHHHHhccCCCceEEeecc
Q 038998 444 NEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 444 ~~~~~~~~~~g~dg~W~Dmn 463 (903)
.-.+.| .+.|+|.++.|.+
T Consensus 161 ~DA~~f-A~WGvDylK~D~C 179 (412)
T PLN02692 161 QDAKTF-ASWGIDYLKYDNC 179 (412)
T ss_pred HHHHHH-HhcCCCEEecccc
Confidence 545445 4699999999954
No 29
>PLN02899 alpha-galactosidase
Probab=98.17 E-value=5.6e-05 Score=88.84 Aligned_cols=192 Identities=15% Similarity=0.145 Sum_probs=118.1
Q ss_pred CHHHHHHHHHHhHhcC---CCceEEEEeccccC-----------------CCCccccCCCCCCh----hHHHHHHHHHHH
Q 038998 325 NVSDLEAVVAGYAKAV---IPLEVMWTDIDYMD-----------------GYKDFTLDPINFPA----DQMKKFVDTLHQ 380 (903)
Q Consensus 325 ~~~~v~~vv~~~~~~~---IP~D~iwlDidy~~-----------------~~~dFt~d~~~FP~----~~l~~~v~~L~~ 380 (903)
+++++++.++.+ +.+ .-.+-|.+|..|+. .++.+..|++|||. .+|+.+.+.+|+
T Consensus 46 ~E~~i~~~Ad~v-s~GLk~~GY~YVnIDDcW~~~~~~g~~~~s~g~~~~D~~GrLvPDp~RFPSs~~g~GmK~LADYVHs 124 (633)
T PLN02899 46 SEEEFLQNAEIV-SQRLLPFGYEYVVVDYLWYRKKVEGAYVDSLGFDVIDEWGRPIPDPGRWPSSRGGKGFTEVAEKVHA 124 (633)
T ss_pred CHHHHHHHHHHH-HcchHhhCCeEEEEccccccccccccccccccccccCCCCCCccCcccCCCCccCCCcHHHHHHHHh
Confidence 778887777633 333 24478899999974 24567899999996 479999999999
Q ss_pred cCceEEEEecCCCCCCC---ChHH--------HHHhHhCCeeeecCCcCeeeeeeCCCc-cccCCCChHHHHHHHHHHHH
Q 038998 381 NGQRYVLILDPGISVNN---SYET--------YIRGIEADIFIKRDGVPYVGQVWEGPL-NFPDFVNPATQTFWENEIKL 448 (903)
Q Consensus 381 ~G~k~v~ivdP~I~~~~---~y~~--------y~~g~~~~~fvk~~g~~~~g~~WpG~~-~~~Dftnp~a~~ww~~~~~~ 448 (903)
+|.|+.+.++++|.... ..+. |.+ .-.++..++-+.+-....|.... .-.|...+.+++|.....+.
T Consensus 125 kGLKFGIY~~~Gi~tcA~~~~~PI~gs~~g~~y~~-s~~~~~a~DIa~~~~tC~w~~~g~~~vDa~~~~g~a~~~Sla~t 203 (633)
T PLN02899 125 MGLKFGIHVMRGISTQAVNANTPILDAVKGGAYEE-SGRQWRAKDIALKERACAWMSHGFMSVNTKLGAGKAFLRSLYDQ 203 (633)
T ss_pred CCcceEEEecCCCcccccccCCccccccccccccc-cccccchhhccccccccccCCCCcccccccccchhhhhHHHHHH
Confidence 99999999999986421 1110 110 00011111111111111132111 23688889999988877666
Q ss_pred HhccCCCceEEeeccccccCCCCCCCCCCCCCCCCccccCCCCccCCCCccccccccccCCcccccccchhhhhHHHHHH
Q 038998 449 FRDILPLDGLWLDMNEISNFITSPPTPFSTLDDPPYKINNNGTRRPINNKTIPATALHYGNVTEYNVHSLYGLLEAKATR 528 (903)
Q Consensus 449 ~~~~~g~dg~W~DmnEps~f~~~~~~~~~~l~~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~ 528 (903)
|- +.|||.++.|..-+ + ++ +. . +.++..
T Consensus 204 fA-sWGVDyLKyD~c~~----~------------~~---------------------~~---~-----------ey~~ms 231 (633)
T PLN02899 204 YA-EWGVDFVKHDCVFG----D------------DF---------------------DL---E-----------EITYVS 231 (633)
T ss_pred HH-HhCCCEEEEcCCCC----C------------CC---------------------Ch---H-----------HHHHHH
Confidence 65 69999999994211 0 00 00 0 113345
Q ss_pred HHHHHHhCCCCEEEecccccCCC----------Cccccc--CCCCcCchHHHHHhHHH
Q 038998 529 AALINAVGKRPFMLTRSTFVSSG----------KYTAHW--TGDNAATWDDLAYTIPS 574 (903)
Q Consensus 529 ~al~~~~~~RpfilsRS~f~Gsq----------ry~~~W--tGDn~s~W~~L~~sI~~ 574 (903)
+||.+ -.||+++|=|- |.+ .++-.| +||...+|+.+...+..
T Consensus 232 ~AL~a--TGRPIvySLsp--G~~~~p~wa~~v~~~aNmWRitgDI~D~W~sV~~~~d~ 285 (633)
T PLN02899 232 EVLKE--LDRPIVYSLSP--GTSATPTMAKEVSGLVNMYRITGDDWDTWGDVAAHFDV 285 (633)
T ss_pred HHHHH--hCCCeEEEecC--CcccchhhhhhhhccCccceecCCcccchHHHHHHHHH
Confidence 56655 36999998873 333 234456 69999999988776544
No 30
>PLN02808 alpha-galactosidase
Probab=98.10 E-value=7.8e-05 Score=84.63 Aligned_cols=120 Identities=16% Similarity=0.209 Sum_probs=86.6
Q ss_pred hCCCCCCCCcccccceeeeCC---CCHHHHHHHHHHhHhcCCC---ceEEEEeccccC----CCCccccCCCCCChhHHH
Q 038998 303 IGRPAPMPYWSFGFHQCRYGY---KNVSDLEAVVAGYAKAVIP---LEVMWTDIDYMD----GYKDFTLDPINFPADQMK 372 (903)
Q Consensus 303 tG~p~lpP~WalG~~qsr~gY---~~~~~v~~vv~~~~~~~IP---~D~iwlDidy~~----~~~dFt~d~~~FP~~~l~ 372 (903)
-|....|| +|+. |...| -+++.++++++.|.+.|+. ++.|.+|..|+. ..+++..|+++||+ +|+
T Consensus 26 ngla~tPp---mGWn-sW~~~~~~i~e~~i~~~a~~mv~~Gl~~~Gy~yv~iDd~W~~~~rd~~G~~~~d~~rFP~-G~~ 100 (386)
T PLN02808 26 NGLGLTPQ---MGWN-SWNHFQCNINETLIKQTADAMVSSGLAALGYKYINLDDCWAELKRDSQGNLVPKASTFPS-GIK 100 (386)
T ss_pred CcccCCCc---ceEE-chHHHCCCCCHHHHHHHHHHHHHcchHHhCCEEEEEcCCcCCCCcCCCCCEeeChhhcCc-cHH
Confidence 45566677 4542 22222 2789999999998776554 899999999975 46789999999997 799
Q ss_pred HHHHHHHHcCceEEEEecCCCCCCCChHHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhcc
Q 038998 373 KFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDI 452 (903)
Q Consensus 373 ~~v~~L~~~G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~ 452 (903)
.+++.+|++|+|+.++.+++...-.. ..|.+..+...-.+.|- +
T Consensus 101 ~lad~iH~~GlkfGiy~~~G~~tC~~-----------------------------------~~pGs~~~e~~DA~~fA-~ 144 (386)
T PLN02808 101 ALADYVHSKGLKLGIYSDAGTLTCSK-----------------------------------TMPGSLGHEEQDAKTFA-S 144 (386)
T ss_pred HHHHHHHHCCCceEEEecCCccccCC-----------------------------------CCCcchHHHHHHHHHHH-H
Confidence 99999999999999999886432110 12334455555454454 6
Q ss_pred CCCceEEeecc
Q 038998 453 LPLDGLWLDMN 463 (903)
Q Consensus 453 ~g~dg~W~Dmn 463 (903)
.|+|.++.|.+
T Consensus 145 WGvDylK~D~C 155 (386)
T PLN02808 145 WGIDYLKYDNC 155 (386)
T ss_pred hCCCEEeecCc
Confidence 99999999954
No 31
>PLN02355 probable galactinol--sucrose galactosyltransferase 1
Probab=97.10 E-value=0.018 Score=69.68 Aligned_cols=108 Identities=15% Similarity=0.214 Sum_probs=76.1
Q ss_pred CEEEEEEEeCCCHHHHHHHHHHHhCCC---------CCCCCcccccceeeeCCC----CHHHHHHHHHHhHhcCCCceEE
Q 038998 280 GIIDLYFFAGPSPDSVIQQYTEFIGRP---------APMPYWSFGFHQCRYGYK----NVSDLEAVVAGYAKAVIPLEVM 346 (903)
Q Consensus 280 G~lD~y~f~G~~p~~vi~qY~~ltG~p---------~lpP~WalG~~qsr~gY~----~~~~v~~vv~~~~~~~IP~D~i 346 (903)
+.-=+|+-.|.+|-++++++.+.+-+. .-+|.--=++=.|.|... +++.|++.++.+.+.++|..-+
T Consensus 160 ~~~~v~v~~g~dpy~li~~a~~~v~~hl~tf~~re~K~~P~~ld~~GWCTW~afy~~Vt~~~I~~~l~~l~~~g~p~~~v 239 (758)
T PLN02355 160 GSHLVFVAAGSDPFDVITNAVKAVEKHLQTFSHRERKKMPDMLNWFGWCTWDAFYTNVTAEGVKQGLESLEKGGVTPKFV 239 (758)
T ss_pred CceEEEEEcCCCHHHHHHHHHHHHHHHhccccchhhccCCcccceeeEEehhHhhccCCHHHHHHHHHHHHhCCCCccEE
Confidence 444567778999999999998765433 113321213445888632 7788999999999999999999
Q ss_pred EEeccccCCC--------------------CccccCCCCCCh------------hHHHHHHHHHHH-cCceEEEE
Q 038998 347 WTDIDYMDGY--------------------KDFTLDPINFPA------------DQMKKFVDTLHQ-NGQRYVLI 388 (903)
Q Consensus 347 wlDidy~~~~--------------------~dFt~d~~~FP~------------~~l~~~v~~L~~-~G~k~v~i 388 (903)
.+|..|+.-. ..|.-++ +||. .+|+.+++.+++ .|+|+|-.
T Consensus 240 iIDDGwQs~~~d~~~~~~~~~~~~q~~~rL~~f~~n~-KF~~~~~~~~~~~~~~~Glk~~V~~iK~~~~vk~V~V 313 (758)
T PLN02355 240 IIDDGWQSVGMDPTGIECLADNSANFANRLTHIKENH-KFQKNGKEGHRVDDPALGLGHIVTEIKEKHSLKYVYV 313 (758)
T ss_pred EEeccccccccccccccccccccchhhhhhccccccc-cccccccccccccCCCCcHHHHHHHHHhhcCCcEEEE
Confidence 9999997621 1233333 5652 389999999996 69988753
No 32
>PLN02219 probable galactinol--sucrose galactosyltransferase 2
Probab=97.09 E-value=0.015 Score=70.31 Aligned_cols=106 Identities=17% Similarity=0.266 Sum_probs=79.0
Q ss_pred EEEEEEeCCCHHHHHHHHHHHhCCC---------CCCCCcccccceeeeC--CC--CHHHHHHHHHHhHhcCCCceEEEE
Q 038998 282 IDLYFFAGPSPDSVIQQYTEFIGRP---------APMPYWSFGFHQCRYG--YK--NVSDLEAVVAGYAKAVIPLEVMWT 348 (903)
Q Consensus 282 lD~y~f~G~~p~~vi~qY~~ltG~p---------~lpP~WalG~~qsr~g--Y~--~~~~v~~vv~~~~~~~IP~D~iwl 348 (903)
-=.|+-.|.+|-++++++.+.+-+- .-+|.|-=||=.|.|. |. +++.|.+.++.+.+.++|...+.+
T Consensus 158 ~~v~~~~G~dPy~li~~a~~av~~h~~tf~~re~K~~p~~~D~~GWCTWdafy~dVt~~~I~~~l~~l~e~gip~~~viI 237 (775)
T PLN02219 158 HLVYMHAGTNPFEVIRQAVKAVEKHMQTFLHREKKKLPSFLDWFGWCTWDAFYTDVTAEGVDEGLKSLSEGGTPPKFLII 237 (775)
T ss_pred eEEEEecCCCHHHHHHHHHHHHHHhcccccccccccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEE
Confidence 3445677999999999998876221 1257777677779986 22 678899999999999999999999
Q ss_pred eccccCCC--------------------CccccCC--------CCCChhHHHHHHHHHHH-cCceEEEE
Q 038998 349 DIDYMDGY--------------------KDFTLDP--------INFPADQMKKFVDTLHQ-NGQRYVLI 388 (903)
Q Consensus 349 Didy~~~~--------------------~dFt~d~--------~~FP~~~l~~~v~~L~~-~G~k~v~i 388 (903)
|..|+.-. ..|.-++ ..||. +|+.+++++++ .|+|+|-.
T Consensus 238 DDGwQsi~~~~~~~~~~~~~g~qf~~rL~~f~en~KF~~~~~~~~fp~-Glk~~V~~iK~~~~vk~V~V 305 (775)
T PLN02219 238 DDGWQQIENKEKDENCVVQEGAQFATRLTGIKENAKFQKNDQKNEQVS-GLKHVVDDAKQRHNVKQVYV 305 (775)
T ss_pred ccCccccccccccccccccccchhhhhhccccccccccccccccCCCC-cHHHHHHHHHhccCCcEEEE
Confidence 99997521 2233222 14775 89999999996 69988753
No 33
>PLN02684 Probable galactinol--sucrose galactosyltransferase
Probab=96.07 E-value=0.17 Score=61.36 Aligned_cols=104 Identities=19% Similarity=0.281 Sum_probs=76.1
Q ss_pred EEEEeCCCHHHHHHHHHHHhCCC---------CCCCCcccccceeeeC--CC--CHHHHHHHHHHhHhcCCCceEEEEec
Q 038998 284 LYFFAGPSPDSVIQQYTEFIGRP---------APMPYWSFGFHQCRYG--YK--NVSDLEAVVAGYAKAVIPLEVMWTDI 350 (903)
Q Consensus 284 ~y~f~G~~p~~vi~qY~~ltG~p---------~lpP~WalG~~qsr~g--Y~--~~~~v~~vv~~~~~~~IP~D~iwlDi 350 (903)
+|+-.|.+|-++|++=.+..-+. .-+|.|-=||=.|.|. |. +++.|++.++.+.+.++|..-+.+|.
T Consensus 163 ~~v~~g~~Py~~i~~a~~~v~~~l~tf~~reeK~~P~~~D~fGWCTWdafy~dVt~~~I~~~l~~l~~~g~p~~~vIIDD 242 (750)
T PLN02684 163 LFIHAGTDPFQTITDAIRAVKLHLKSFRQRHEKKLPGIVDYFGWCTWDAFYQEVTQEGVEAGLKSLAAGGTPPKFVIIDD 242 (750)
T ss_pred EEEecCCCHHHHHHHHHHHHHHHhhccchhhhccCccccceeeEEEhhHhhccCCHHHHHHHHHHHHhCCCCceEEEEec
Confidence 47778999999988764432221 2267777677779986 22 67889999999999999999999999
Q ss_pred cccCCCC-------------------ccccCCCCCCh-----hHHHHHHHHHH-HcCceEEEE
Q 038998 351 DYMDGYK-------------------DFTLDPINFPA-----DQMKKFVDTLH-QNGQRYVLI 388 (903)
Q Consensus 351 dy~~~~~-------------------dFt~d~~~FP~-----~~l~~~v~~L~-~~G~k~v~i 388 (903)
.|+.-.. .|.-+ .+||+ .+|+.+++.|+ +.|+|.|-.
T Consensus 243 GwQs~~~d~~~~~~~~~~~q~~~rL~~f~en-~KF~~~~~p~~Glk~~V~~iK~~~~vk~V~V 304 (750)
T PLN02684 243 GWQSVGGDPTVEAGDEKKEQPLLRLTGIKEN-EKFKKKDDPNVGIKNIVNIAKEKHGLKYVYV 304 (750)
T ss_pred ccccccccccccccccccchhhhhhccCccc-cccccccCCCccHHHHHHHHHhhcCCcEEEE
Confidence 9975322 13222 45664 58999999998 569998753
No 34
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=95.97 E-value=0.028 Score=54.91 Aligned_cols=122 Identities=18% Similarity=0.245 Sum_probs=74.0
Q ss_pred HHHHHHHhHhcCCCceEEEEecc------ccCCCCccccCCCCCChhHHHHHHHHHHHcCceEEEEecCCCCCCCChHHH
Q 038998 329 LEAVVAGYAKAVIPLEVMWTDID------YMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETY 402 (903)
Q Consensus 329 v~~vv~~~~~~~IP~D~iwlDid------y~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~~y~~y 402 (903)
.+++++.+++.++ |++.+... |-...- ..-.+. ....-+.++|+..|++|+|++..++.... + ..|
T Consensus 2 ~~~~~~~lk~~~v--~si~i~a~~h~g~ayYPt~~-~~~hp~-L~~Dllge~v~a~h~~Girv~ay~~~~~d--~--~~~ 73 (132)
T PF14871_consen 2 PEQFVDTLKEAHV--NSITIFAKCHGGYAYYPTKV-GPRHPG-LKRDLLGEQVEACHERGIRVPAYFDFSWD--E--DAA 73 (132)
T ss_pred HHHHHHHHHHhCC--CEEEEEcccccEEEEccCCC-CcCCCC-CCcCHHHHHHHHHHHCCCEEEEEEeeecC--h--HHH
Confidence 3567777888776 66655432 111111 110110 00113689999999999999999998732 2 233
Q ss_pred HHhHhCCeeeecC-CcCeeeeee--CCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeec
Q 038998 403 IRGIEADIFIKRD-GVPYVGQVW--EGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDM 462 (903)
Q Consensus 403 ~~g~~~~~fvk~~-g~~~~g~~W--pG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dm 462 (903)
+ ..-++++++. |++..+.-+ || -...-++. .-+++-..+++++....++||+|+||
T Consensus 74 ~--~HPeW~~~~~~G~~~~~~~~~~~~-~~~~c~ns-~Y~e~~~~~i~Ei~~~y~~DGiF~D~ 132 (132)
T PF14871_consen 74 E--RHPEWFVRDADGRPMRGERFGYPG-WYTCCLNS-PYREFLLEQIREILDRYDVDGIFFDI 132 (132)
T ss_pred H--hCCceeeECCCCCCcCCCCcCCCC-ceecCCCc-cHHHHHHHHHHHHHHcCCCCEEEecC
Confidence 3 3567888766 775322211 12 12233443 34578888888888889999999997
No 35
>PLN02711 Probable galactinol--sucrose galactosyltransferase
Probab=95.86 E-value=0.68 Score=56.55 Aligned_cols=104 Identities=19% Similarity=0.279 Sum_probs=72.6
Q ss_pred EEEEeCCCHHHHHHHHHHH----hCCCC-----CCCCcccccceeeeC--CC--CHHHHHHHHHHhHhcCCCceEEEEec
Q 038998 284 LYFFAGPSPDSVIQQYTEF----IGRPA-----PMPYWSFGFHQCRYG--YK--NVSDLEAVVAGYAKAVIPLEVMWTDI 350 (903)
Q Consensus 284 ~y~f~G~~p~~vi~qY~~l----tG~p~-----lpP~WalG~~qsr~g--Y~--~~~~v~~vv~~~~~~~IP~D~iwlDi 350 (903)
+|+-.|.+|-+++++=.+. +|.-. -+|..-=||=.|.|. |. +++.|.+-++.+++.|||..-+.+|.
T Consensus 174 ~~i~~g~~Py~~i~~A~~~~~~~l~tf~~reeK~~P~~~D~fGWCTWdAfy~~Vt~egI~~gl~~L~~~Gip~~~vIIDD 253 (777)
T PLN02711 174 LYMHAGDDPYKLVKDAMKVVRVHLGTFKLLEEKTPPGIVDKFGWCTWDAFYLTVHPQGVWEGVKGLVDGGCPPGLVLIDD 253 (777)
T ss_pred EEEEcCCCHHHHHHHHHHHHHHHhcccchhhhccCCcccccceEEehhHhcccCCHHHHHHHHHHHHhCCCCccEEEEcC
Confidence 5777899999988776544 33211 144444455569996 33 67889999999999999999999999
Q ss_pred cccCCC-------------------------CccccC---------CCCCChhHHHHHHHHHHHc--CceEEEE
Q 038998 351 DYMDGY-------------------------KDFTLD---------PINFPADQMKKFVDTLHQN--GQRYVLI 388 (903)
Q Consensus 351 dy~~~~-------------------------~dFt~d---------~~~FP~~~l~~~v~~L~~~--G~k~v~i 388 (903)
.|++-- ..|.-+ +..||. +|+.+++.|+++ |+|+|-.
T Consensus 254 GWQsi~~d~~~~~~~~~~~~~~~g~q~~~rL~~f~en~KF~~~~~~~~~~p~-Glk~~v~~iK~~~~~vk~VyV 326 (777)
T PLN02711 254 GWQSICHDEDPISDQEGMNRTVAGEQMPCRLLKFEENYKFRDYVSPKSLSNK-GMGAFIRDLKEEFKTVDYVYV 326 (777)
T ss_pred CcccccccCcccccccccccccccchhhhhhccccccccccccccccCCCCC-cHHHHHHHHHhhCCCCCEEEE
Confidence 998511 122222 233553 899999999984 6888753
No 36
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=94.73 E-value=0.4 Score=53.70 Aligned_cols=132 Identities=11% Similarity=0.165 Sum_probs=82.2
Q ss_pred CHHHHHHHHHHhHhcCCCceEEEEecccc------CCC----CccccCCCCCC--hhHHHHHHHHHHHcCceEEEEecCC
Q 038998 325 NVSDLEAVVAGYAKAVIPLEVMWTDIDYM------DGY----KDFTLDPINFP--ADQMKKFVDTLHQNGQRYVLILDPG 392 (903)
Q Consensus 325 ~~~~v~~vv~~~~~~~IP~D~iwlDidy~------~~~----~dFt~d~~~FP--~~~l~~~v~~L~~~G~k~v~ivdP~ 392 (903)
+.+++.++++.+++.|+ -+|+.+.-.. ... ...+-.+..-| || |+.+|++-|++|+++-.|+...
T Consensus 17 ~~~~~~~~l~~l~~~~~--N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~~pg~Dp-L~~~I~eaHkrGlevHAW~~~~ 93 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAGF--NAVFVQVRPRGDALYPSDIEPWSGYLTGKQGKDPGFDP-LEFMIEEAHKRGLEVHAWFRVG 93 (311)
T ss_pred CHHHHHHHHHHHHHcCC--CEEEEEEEeCcEEEecccccccccccCCCCCCCCCccH-HHHHHHHHHHcCCEEEEEEEee
Confidence 68899999999999994 6666654332 111 11111111111 23 8999999999999999999544
Q ss_pred CCCCCChHHHHHhHhCCeee-ecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEee
Q 038998 393 ISVNNSYETYIRGIEADIFI-KRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLD 461 (903)
Q Consensus 393 I~~~~~y~~y~~g~~~~~fv-k~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~D 461 (903)
+.....-....+ ....+. +.+|....-..=.|...|.|..+|+++++-.+.++++.....+||+=+|
T Consensus 94 ~~~~~~~~~~~~--~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~YdvDGIhlD 161 (311)
T PF02638_consen 94 FNAPDVSHILKK--HPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNYDVDGIHLD 161 (311)
T ss_pred cCCCchhhhhhc--CchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhcCCCCeEEec
Confidence 433211111111 111122 2233211100002456789999999999999999999988999999998
No 37
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=93.85 E-value=1.1 Score=54.05 Aligned_cols=134 Identities=22% Similarity=0.346 Sum_probs=82.5
Q ss_pred CCHHHHHHHHHHhHhcCCCceEEEEeccccC-----CC--Cc-cccCCCCCCh-hHHHHHHHHHHHcCceEEEEecC-CC
Q 038998 324 KNVSDLEAVVAGYAKAVIPLEVMWTDIDYMD-----GY--KD-FTLDPINFPA-DQMKKFVDTLHQNGQRYVLILDP-GI 393 (903)
Q Consensus 324 ~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~-----~~--~d-Ft~d~~~FP~-~~l~~~v~~L~~~G~k~v~ivdP-~I 393 (903)
.+...+.+-++.+++.|| ++||+--=+-. +| .| |..|+ +|-. .++++||+++|++|+|+|+=+-+ |+
T Consensus 25 Gdl~gi~~~Ldyl~~LGv--~~i~L~Pi~~~~~~~~gY~~~dy~~vd~-~~Gt~~df~~Lv~~ah~~Gi~vilD~V~NH~ 101 (539)
T TIGR02456 25 GDFPGLTSKLDYLKWLGV--DALWLLPFFQSPLRDDGYDVSDYRAILP-EFGTIDDFKDFVDEAHARGMRVIIDLVLNHT 101 (539)
T ss_pred cCHHHHHHhHHHHHHCCC--CEEEECCCcCCCCCCCCCCcccccccCh-hhCCHHHHHHHHHHHHHCCCEEEEEeccCcC
Confidence 466777777777777665 88888532211 11 12 34454 3432 47899999999999999874433 44
Q ss_pred CCCCChHHHHHhHh------CCeeeecC-CcCee----------eeeeC---C-----------CccccCCCChHHHHHH
Q 038998 394 SVNNSYETYIRGIE------ADIFIKRD-GVPYV----------GQVWE---G-----------PLNFPDFVNPATQTFW 442 (903)
Q Consensus 394 ~~~~~y~~y~~g~~------~~~fvk~~-g~~~~----------g~~Wp---G-----------~~~~~Dftnp~a~~ww 442 (903)
+. ..+.|+++++ .++|+..+ +..+. +..|. + ...-.|+.||+++++.
T Consensus 102 s~--~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~pdln~~np~vr~~l 179 (539)
T TIGR02456 102 SD--QHPWFQEARSNPDGPYRDFYVWSDTDEKYKDTRIIFVDTEKSNWTFDPVAKQYYWHRFFSHQPDLNYDNPAVHDAV 179 (539)
T ss_pred CC--CCHHHHHHhhCCCCCCCceEEecCCCcccccccccccccCCCCccccCCcCeeEEecccCCCCccCCCCHHHHHHH
Confidence 43 2345554432 35665432 22111 11231 0 0112577899999999
Q ss_pred HHHHHHHhccCCCceEEeecc
Q 038998 443 ENEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 443 ~~~~~~~~~~~g~dg~W~Dmn 463 (903)
.+.++.+.+ .|+|||=+|+-
T Consensus 180 ~~~~~~w~~-~GvDGfRlDav 199 (539)
T TIGR02456 180 HDVMRFWLD-LGVDGFRLDAV 199 (539)
T ss_pred HHHHHHHHH-cCCCEEEEecH
Confidence 988888886 89999999964
No 38
>PRK10785 maltodextrin glucosidase; Provisional
Probab=93.36 E-value=1.5 Score=53.67 Aligned_cols=132 Identities=17% Similarity=0.192 Sum_probs=82.1
Q ss_pred CCHHHHHHHHHHhHhcCCCceEEEEeccccC--CCC----c-cccCCCCCC-hhHHHHHHHHHHHcCceEEEEecC-CCC
Q 038998 324 KNVSDLEAVVAGYAKAVIPLEVMWTDIDYMD--GYK----D-FTLDPINFP-ADQMKKFVDTLHQNGQRYVLILDP-GIS 394 (903)
Q Consensus 324 ~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~--~~~----d-Ft~d~~~FP-~~~l~~~v~~L~~~G~k~v~ivdP-~I~ 394 (903)
.+..-|.+-++.+++.|| ++||+--=+.. ..+ | +..|+ +|- ..++++||+++|++|+|+|+=+-+ |.+
T Consensus 176 GDl~GI~~kLdYL~~LGv--~~I~L~Pif~s~s~hgYd~~Dy~~iDp-~~Gt~~df~~Lv~~aH~rGikVilD~V~NH~~ 252 (598)
T PRK10785 176 GDLDGISEKLPYLKKLGV--TALYLNPIFTAPSVHKYDTEDYRHVDP-QLGGDAALLRLRHATQQRGMRLVLDGVFNHTG 252 (598)
T ss_pred cCHHHHHHHHHHHHHcCC--CEEEeCCcccCCCCCCcCcccccccCc-ccCCHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 367777777778877666 89998632211 111 1 23444 333 357999999999999998874433 343
Q ss_pred CCCChHHHHHhH-------------hCCeeeecC-CcCeeeeeeCCCcccc--CCCChHHHHHHHH----HHHHHhcc-C
Q 038998 395 VNNSYETYIRGI-------------EADIFIKRD-GVPYVGQVWEGPLNFP--DFVNPATQTFWEN----EIKLFRDI-L 453 (903)
Q Consensus 395 ~~~~y~~y~~g~-------------~~~~fvk~~-g~~~~g~~WpG~~~~~--Dftnp~a~~ww~~----~~~~~~~~-~ 453 (903)
.+ .+-|++.. ..++|.-.+ |. -.+|-|....| |+.||+++++..+ .++.+++. .
T Consensus 253 ~~--~~~f~~~~~~~~ga~~~~~spy~dwf~~~~~~~---~~~w~g~~~lPdLN~~np~v~~~l~~~~~~v~~~Wl~~~~ 327 (598)
T PRK10785 253 DS--HPWFDRHNRGTGGACHHPDSPWRDWYSFSDDGR---ALDWLGYASLPKLDFQSEEVVNEIYRGEDSIVRHWLKAPY 327 (598)
T ss_pred CC--CHHHHHhhccccccccCCCCCcceeeEECCCCC---cCCcCCCCcCccccCCCHHHHHHHHhhhhHHHHHhhcCCC
Confidence 32 23343321 123443322 21 13566665565 5689999988764 56777775 7
Q ss_pred CCceEEeecc
Q 038998 454 PLDGLWLDMN 463 (903)
Q Consensus 454 g~dg~W~Dmn 463 (903)
|+|||=+|..
T Consensus 328 giDG~RlDva 337 (598)
T PRK10785 328 NIDGWRLDVV 337 (598)
T ss_pred CCcEEEEecH
Confidence 9999999975
No 39
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional
Probab=93.33 E-value=0.48 Score=62.18 Aligned_cols=96 Identities=17% Similarity=0.257 Sum_probs=61.7
Q ss_pred ChhHHHHHHHHHHHcCceEEEEecC-CCCCCCChHHH--HHhHhCC-eeeecCCcCeeeeeeCCCccccCCCChHHHHHH
Q 038998 367 PADQMKKFVDTLHQNGQRYVLILDP-GISVNNSYETY--IRGIEAD-IFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFW 442 (903)
Q Consensus 367 P~~~l~~~v~~L~~~G~k~v~ivdP-~I~~~~~y~~y--~~g~~~~-~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww 442 (903)
...++++||+.+|++|+++|+=+-+ |...+..+.+. .++.+.. +|-.+.+.+..-..|.|....+|+.||.++++.
T Consensus 245 ~~~efk~lV~~~H~~GI~VILDvV~NHt~~~~~~~p~~~~~~~d~~~yy~~~~~~~~~y~~~~G~gn~~n~~~p~v~~~i 324 (1221)
T PRK14510 245 GEEEFAQAIKEAQSAGIAVILDVVFNHTGESNHYGPTLSAYGSDNSPYYRLEPGNPKEYENWWGCGNLPNLERPFILRLP 324 (1221)
T ss_pred cHHHHHHHHHHHHHCCCEEEEEEccccccCCCCCCCcccccCCCCCCceEecCCCCCcccCCCCCCCccccCCHHHHHHH
Confidence 3457999999999999998874322 43332221110 1112222 232222222122345566667999999999999
Q ss_pred HHHHHHHhccCCCceEEeecc
Q 038998 443 ENEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 443 ~~~~~~~~~~~g~dg~W~Dmn 463 (903)
.+.++.+.+ +|||||=+|..
T Consensus 325 ~d~lr~Wv~-~gVDGfRfDla 344 (1221)
T PRK14510 325 MDVLRSWAK-RGVDGFRLDLA 344 (1221)
T ss_pred HHHHHHHHH-hCCCEEEEech
Confidence 999999988 99999999953
No 40
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=93.16 E-value=0.83 Score=55.99 Aligned_cols=123 Identities=18% Similarity=0.195 Sum_probs=71.6
Q ss_pred HHHHhHhcCCCceEEEEecccc----C--CC---CccccCCCCCCh-hHHHHHHHHHHHcCceEEEEecC-CCCCCCCh-
Q 038998 332 VVAGYAKAVIPLEVMWTDIDYM----D--GY---KDFTLDPINFPA-DQMKKFVDTLHQNGQRYVLILDP-GISVNNSY- 399 (903)
Q Consensus 332 vv~~~~~~~IP~D~iwlDidy~----~--~~---~dFt~d~~~FP~-~~l~~~v~~L~~~G~k~v~ivdP-~I~~~~~y- 399 (903)
+++.+++.|| ++||+=--+. . +| ..|..++ +|.. .++++||+.+|++|+++|+-+-+ |...+...
T Consensus 162 l~dyl~~LGv--t~i~L~Pi~e~~~~~~wGY~~~~y~~~~~-~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~ 238 (613)
T TIGR01515 162 LIPYVKELGF--THIELLPVAEHPFDGSWGYQVTGYYAPTS-RFGTPDDFMYFVDACHQAGIGVILDWVPGHFPKDDHGL 238 (613)
T ss_pred HHHHHHHcCC--CEEEECCcccCCCCCCCCCCcccCccccc-ccCCHHHHHHHHHHHHHCCCEEEEEecccCcCCccchh
Confidence 3466677665 6777621110 1 11 1233432 4543 36999999999999999986544 44433210
Q ss_pred HHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeec
Q 038998 400 ETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDM 462 (903)
Q Consensus 400 ~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dm 462 (903)
..|+. ..-++..+.... ....| | +.-.|+.||+++++..+.++.+++..++|||=+|.
T Consensus 239 ~~~~~--~~~y~~~~~~~~-~~~~w-~-~~~~~~~~~~Vr~~l~~~~~~W~~ey~iDG~R~D~ 296 (613)
T TIGR01515 239 AEFDG--TPLYEHKDPRDG-EHWDW-G-TLIFDYGRPEVRNFLVANALYWAEFYHIDGLRVDA 296 (613)
T ss_pred hccCC--CcceeccCCccC-cCCCC-C-CceecCCCHHHHHHHHHHHHHHHHHhCCcEEEEcC
Confidence 11100 000111111100 01123 2 23469999999999999999999889999999996
No 41
>PF05691 Raffinose_syn: Raffinose synthase or seed imbibition protein Sip1; InterPro: IPR008811 This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (2.4.1.82 from EC) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway [].
Probab=92.72 E-value=2.2 Score=52.51 Aligned_cols=105 Identities=23% Similarity=0.442 Sum_probs=74.3
Q ss_pred EEEEEeCCCHHHHHHHHHHHhC---------CCCCCCCcccccceeeeC--CC--CHHHHHHHHHHhHhcCCCceEEEEe
Q 038998 283 DLYFFAGPSPDSVIQQYTEFIG---------RPAPMPYWSFGFHQCRYG--YK--NVSDLEAVVAGYAKAVIPLEVMWTD 349 (903)
Q Consensus 283 D~y~f~G~~p~~vi~qY~~ltG---------~p~lpP~WalG~~qsr~g--Y~--~~~~v~~vv~~~~~~~IP~D~iwlD 349 (903)
-+|+-.|.+|-+++++=.+..= .-.-+|.|-=||=.|.|. |. +++.|++.++.+++.|||.-.+.+|
T Consensus 155 ~l~v~~g~dPy~~i~~A~~~~~~~l~tf~~r~~K~~P~~~d~lGwCTWdaf~~~v~~~~i~~~l~~L~~~gi~~~~viID 234 (747)
T PF05691_consen 155 ALYVHAGDDPYELIREAVKAVRKHLGTFRLREEKKYPEFLDGLGWCTWDAFYQDVTEEGILEGLKSLEEGGIPPRFVIID 234 (747)
T ss_pred EEEEeccCCHHHHHHHHHHHHHhcccccccccccchhhhhhhhccccHHHhccccCHHHHHHHHHHHHhCCCCceEEEEe
Confidence 3455678899988877654431 122357777677779996 22 6788999999999999999999999
Q ss_pred ccccCCCCc-----------------c-------------ccC-----CCCCChhHHHHHHHHHHHc--CceEEEE
Q 038998 350 IDYMDGYKD-----------------F-------------TLD-----PINFPADQMKKFVDTLHQN--GQRYVLI 388 (903)
Q Consensus 350 idy~~~~~d-----------------F-------------t~d-----~~~FP~~~l~~~v~~L~~~--G~k~v~i 388 (903)
..|++-..+ | .=. ++.||. +|+.+|++++++ |+|.|-.
T Consensus 235 DGWQ~~~~~~~~~~~~~~~~~~~g~q~~~rl~~~~en~kF~~~~~~~~~~~~~~-GL~~~V~~ik~~~~~Ik~V~V 309 (747)
T PF05691_consen 235 DGWQSVDNDGDDPSKDGMNLVQEGAQFPRRLTDFKENSKFRAYKSGKSPEAFPS-GLKHFVSDIKEKFPGIKYVYV 309 (747)
T ss_pred cchhcccccCcccccccccccccccccchhhhhhhhhhhhhhccCCCcccCCcc-cHHHHHHHHHhhCCCCCEEEE
Confidence 999741111 1 101 124775 799999999987 7887753
No 42
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=92.41 E-value=2.2 Score=51.66 Aligned_cols=134 Identities=21% Similarity=0.396 Sum_probs=79.6
Q ss_pred CCHHHHHHHHHHhHhcCCCceEEEEeccccC-----CC--Cc-cccCCCCCC-hhHHHHHHHHHHHcCceEEEEecC-CC
Q 038998 324 KNVSDLEAVVAGYAKAVIPLEVMWTDIDYMD-----GY--KD-FTLDPINFP-ADQMKKFVDTLHQNGQRYVLILDP-GI 393 (903)
Q Consensus 324 ~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~-----~~--~d-Ft~d~~~FP-~~~l~~~v~~L~~~G~k~v~ivdP-~I 393 (903)
.+...+.+-++.+++.|| ++||+--=+.. +| .| +..|+ +|- ..++++||+++|++|+|+++=+-+ |.
T Consensus 30 Gdl~gi~~~ldyl~~lGv--~~i~l~P~~~~~~~~~gY~~~d~~~id~-~~Gt~~d~~~lv~~~h~~gi~vilD~V~NH~ 106 (551)
T PRK10933 30 GDLRGVTQRLDYLQKLGV--DAIWLTPFYVSPQVDNGYDVANYTAIDP-TYGTLDDFDELVAQAKSRGIRIILDMVFNHT 106 (551)
T ss_pred cCHHHHHHhhHHHHhCCC--CEEEECCCCCCCCCCCCCCcccCCCcCc-ccCCHHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 356667777777777766 88988532211 11 12 23443 333 257999999999999998874433 33
Q ss_pred CCCCChHHHHHhHh-----CCeeeecCCc------C----eeeeee--CC------------CccccCCCChHHHHHHHH
Q 038998 394 SVNNSYETYIRGIE-----ADIFIKRDGV------P----YVGQVW--EG------------PLNFPDFVNPATQTFWEN 444 (903)
Q Consensus 394 ~~~~~y~~y~~g~~-----~~~fvk~~g~------~----~~g~~W--pG------------~~~~~Dftnp~a~~ww~~ 444 (903)
+. ..+-|+++.+ .++|+-.++. . +-+..| .. ...=+|+.||++++...+
T Consensus 107 s~--~~~wf~~~~~~~~~y~d~y~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~pdLn~~np~V~~~l~~ 184 (551)
T PRK10933 107 ST--QHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYYLHLFAPEQADLNWENPAVRAELKK 184 (551)
T ss_pred cC--chhHHHhhcCCCCCCcCceEecCCCCCCCCCcccccCCCccccccCCCCceEeecccccCCccCCCCHHHHHHHHH
Confidence 32 2233444321 2455432211 1 111111 11 011246789999999998
Q ss_pred HHHHHhccCCCceEEeecc
Q 038998 445 EIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 445 ~~~~~~~~~g~dg~W~Dmn 463 (903)
.++.+.+ .|+|||=+|.-
T Consensus 185 ~~~~W~~-~GvDGfRlDa~ 202 (551)
T PRK10933 185 VCEFWAD-RGVDGLRLDVV 202 (551)
T ss_pred HHHHHHH-CCCcEEEEcch
Confidence 8888874 89999999964
No 43
>PLN00196 alpha-amylase; Provisional
Probab=92.29 E-value=3 Score=48.79 Aligned_cols=136 Identities=21% Similarity=0.272 Sum_probs=76.8
Q ss_pred HHHHHHHHHHhHhcCCCceEEEEecccc----CCC---CccccCCCCCCh-hHHHHHHHHHHHcCceEEEEe-cCCCCCC
Q 038998 326 VSDLEAVVAGYAKAVIPLEVMWTDIDYM----DGY---KDFTLDPINFPA-DQMKKFVDTLHQNGQRYVLIL-DPGISVN 396 (903)
Q Consensus 326 ~~~v~~vv~~~~~~~IP~D~iwlDidy~----~~~---~dFt~d~~~FP~-~~l~~~v~~L~~~G~k~v~iv-dP~I~~~ 396 (903)
...+.+-+..+++.|| ++||+---+- .+| ..|..|+.+|-. .++++||+++|++|+|+++=+ --|...+
T Consensus 43 ~~~i~~kldyL~~LGv--taIWL~P~~~s~s~hGY~~~D~y~ld~~~fGt~~elk~Lv~~aH~~GIkVilDvV~NH~~~~ 120 (428)
T PLN00196 43 YNFLMGKVDDIAAAGI--THVWLPPPSHSVSEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVIADIVINHRTAE 120 (428)
T ss_pred HHHHHHHHHHHHHcCC--CEEEeCCCCCCCCCCCCCccccCCCCcccCCCHHHHHHHHHHHHHCCCEEEEEECccCcccc
Confidence 4567777888888777 8999863221 122 235566667764 579999999999999988732 2233321
Q ss_pred C-----ChHHHHHhHh---CCee---eecCCcCe---ee--eeeCCCcccc--CCCChHHHHHHHHHHHHHhccCCCceE
Q 038998 397 N-----SYETYIRGIE---ADIF---IKRDGVPY---VG--QVWEGPLNFP--DFVNPATQTFWENEIKLFRDILPLDGL 458 (903)
Q Consensus 397 ~-----~y~~y~~g~~---~~~f---vk~~g~~~---~g--~~WpG~~~~~--Dftnp~a~~ww~~~~~~~~~~~g~dg~ 458 (903)
. .|..+..+.. .+.+ +..+...+ .+ ..|.+....| |..||+++++..+.++-+.+.+|+|||
T Consensus 121 ~~~~~~~y~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~lpDLn~~np~V~~~l~~~~~wl~~~~GiDG~ 200 (428)
T PLN00196 121 HKDGRGIYCLFEGGTPDSRLDWGPHMICRDDTQYSDGTGNLDTGADFAAAPDIDHLNKRVQRELIGWLLWLKSDIGFDAW 200 (428)
T ss_pred cccCCCceEECCCCCCCCccccccccCCCCcccccCCCCceeCCCCCCCCCccCCCCHHHHHHHHHHHHHHhhCCCCCEE
Confidence 1 0111111100 1111 00000001 01 1122223454 567899999887776555557999999
Q ss_pred Eeecc
Q 038998 459 WLDMN 463 (903)
Q Consensus 459 W~Dmn 463 (903)
=+|.-
T Consensus 201 RlD~a 205 (428)
T PLN00196 201 RLDFA 205 (428)
T ss_pred Eeehh
Confidence 99964
No 44
>PLN02960 alpha-amylase
Probab=92.26 E-value=1.2 Score=55.67 Aligned_cols=132 Identities=15% Similarity=0.199 Sum_probs=79.0
Q ss_pred CCHHHHH-HHHHHhHhcCCCceEEEEecccc-CCC--------CccccCCCCCCh-hHHHHHHHHHHHcCceEEEEec-C
Q 038998 324 KNVSDLE-AVVAGYAKAVIPLEVMWTDIDYM-DGY--------KDFTLDPINFPA-DQMKKFVDTLHQNGQRYVLILD-P 391 (903)
Q Consensus 324 ~~~~~v~-~vv~~~~~~~IP~D~iwlDidy~-~~~--------~dFt~d~~~FP~-~~l~~~v~~L~~~G~k~v~ivd-P 391 (903)
.+-.++. +++..+++.|| .+||+=-=+. ..+ ..|..++ +|-. .+++.||+.+|++|+++|+=+- -
T Consensus 413 gtf~~~~e~~LdYLk~LGv--t~IeLmPv~e~~~~~swGY~~~~yfa~~~-~yGtp~dfk~LVd~aH~~GI~VILDvV~N 489 (897)
T PLN02960 413 SSFKEFTQKVLPHVKKAGY--NAIQLIGVQEHKDYSSVGYKVTNFFAVSS-RFGTPDDFKRLVDEAHGLGLLVFLDIVHS 489 (897)
T ss_pred CCHHHHHHHHHHHHHHcCC--CEEEECCcccCCCCCCCCCCcccCCCccc-ccCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 3555664 56888888887 6676631110 011 1233332 2322 3699999999999999988443 3
Q ss_pred CCCCCCC-h-HHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeecc
Q 038998 392 GISVNNS-Y-ETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 392 ~I~~~~~-y-~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dmn 463 (903)
|...+.. + ..|+ | ..+.|...+ ..-....| | +...||.+|+++++..+.++-+++..++|||=+|.-
T Consensus 490 H~~~d~~~~L~~FD-G-~~~~Yf~~~-~~g~~~~W-G-~~~fNy~~~eVr~fLlsna~yWl~EyhIDGfR~DAV 558 (897)
T PLN02960 490 YAAADEMVGLSLFD-G-SNDCYFHSG-KRGHHKRW-G-TRMFKYGDHEVLHFLLSNLNWWVTEYRVDGFQFHSL 558 (897)
T ss_pred ccCCccccchhhcC-C-CccceeecC-CCCccCCC-C-CcccCCCCHHHHHHHHHHHHHHHHHHCCCceeeccc
Confidence 4444321 1 1222 1 112222211 11112345 3 245799999999999999998888899999999954
No 45
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=91.79 E-value=1.1 Score=54.05 Aligned_cols=82 Identities=26% Similarity=0.397 Sum_probs=55.3
Q ss_pred hHHHHHHHHHHHcCceEEEEecC-CCCCCCChH-HHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCCh---HHHHHHH
Q 038998 369 DQMKKFVDTLHQNGQRYVLILDP-GISVNNSYE-TYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNP---ATQTFWE 443 (903)
Q Consensus 369 ~~l~~~v~~L~~~G~k~v~ivdP-~I~~~~~y~-~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp---~a~~ww~ 443 (903)
.++++||+.+|++|+++|+=+-+ |...+..|. .| ..+|-... ...| |. -+||.+| +++++..
T Consensus 160 ~e~k~lV~~aH~~Gi~VilD~V~NH~~~~~~~~~~~-----~~y~~~~~-----~~~w-g~--~~n~~~~~~~~vr~~i~ 226 (542)
T TIGR02402 160 DDLKALVDAAHGLGLGVILDVVYNHFGPEGNYLPRY-----APYFTDRY-----STPW-GA--AINFDGPGSDEVRRYIL 226 (542)
T ss_pred HHHHHHHHHHHHCCCEEEEEEccCCCCCcccccccc-----CccccCCC-----CCCC-CC--ccccCCCcHHHHHHHHH
Confidence 46999999999999998874433 443332221 11 11332111 1233 22 3799999 9999999
Q ss_pred HHHHHHhccCCCceEEeecc
Q 038998 444 NEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 444 ~~~~~~~~~~g~dg~W~Dmn 463 (903)
+.++.+.+..++|||=+|..
T Consensus 227 ~~~~~W~~e~~iDGfR~D~~ 246 (542)
T TIGR02402 227 DNALYWLREYHFDGLRLDAV 246 (542)
T ss_pred HHHHHHHHHhCCcEEEEeCH
Confidence 99998888899999999954
No 46
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=91.77 E-value=2.9 Score=50.53 Aligned_cols=136 Identities=20% Similarity=0.373 Sum_probs=83.2
Q ss_pred CCHHHHHHHHHHhHhcCCCceEEEEeccccC-----CC--Cc-cccCCCCCChhHHHHHHHHHHHcCceEEEEecC-CCC
Q 038998 324 KNVSDLEAVVAGYAKAVIPLEVMWTDIDYMD-----GY--KD-FTLDPINFPADQMKKFVDTLHQNGQRYVLILDP-GIS 394 (903)
Q Consensus 324 ~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~-----~~--~d-Ft~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP-~I~ 394 (903)
.+...+.+-++.+++.|| ++||+---+.. +| .| +.+|+.-=...++++||+++|++|+|+++=+-| |.+
T Consensus 24 G~~~gi~~~l~yl~~lG~--~~i~l~Pi~~~~~~~~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~v~NH~~ 101 (543)
T TIGR02403 24 GDLRGIIEKLDYLKKLGV--DYIWLNPFYVSPQKDNGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDMVFNHTS 101 (543)
T ss_pred cCHHHHHHhHHHHHHcCC--CEEEECCcccCCCCCCCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 366667777777777665 88988643332 11 12 345654222357999999999999999875444 444
Q ss_pred CCCChHHHHHhHh-----CCeeeecC--Cc---Ce----eeeeeCCCc--------------cccCCCChHHHHHHHHHH
Q 038998 395 VNNSYETYIRGIE-----ADIFIKRD--GV---PY----VGQVWEGPL--------------NFPDFVNPATQTFWENEI 446 (903)
Q Consensus 395 ~~~~y~~y~~g~~-----~~~fvk~~--g~---~~----~g~~WpG~~--------------~~~Dftnp~a~~ww~~~~ 446 (903)
. ..+-++++.+ .++|+-.+ |. .+ -+..|.+.. .=+|+.||++++...+.+
T Consensus 102 ~--~~~~f~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~y~~~f~~~~pdln~~np~v~~~i~~~~ 179 (543)
T TIGR02403 102 T--EHEWFKKALAGDSPYRDFYIWRDPKGKPPTNWQSKFGGSAWEYFGDTGQYYLHLFDKTQADLNWENPEVREELKDVV 179 (543)
T ss_pred c--chHHHHHhhcCCCcccCceEecCCCCCCCCcccccCCCcCccccCCCCceEEeccCCcCCccCCCCHHHHHHHHHHH
Confidence 3 2344554432 34554322 21 11 122343211 125778999999888888
Q ss_pred HHHhccCCCceEEeeccc
Q 038998 447 KLFRDILPLDGLWLDMNE 464 (903)
Q Consensus 447 ~~~~~~~g~dg~W~DmnE 464 (903)
+.+.+ .|+|||=+|...
T Consensus 180 ~~W~~-~giDGfRlDa~~ 196 (543)
T TIGR02403 180 NFWRD-KGVDGFRLDVIN 196 (543)
T ss_pred HHHHH-cCCCEEEEeeeh
Confidence 87775 799999999753
No 47
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=91.57 E-value=1.2 Score=54.50 Aligned_cols=90 Identities=14% Similarity=0.227 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHcCceEEEEec-CCCCCCCChHHHHHhHhCCeeeecC--CcCeeeeeeCCCccccCCCChHHHHHHHHH
Q 038998 369 DQMKKFVDTLHQNGQRYVLILD-PGISVNNSYETYIRGIEADIFIKRD--GVPYVGQVWEGPLNFPDFVNPATQTFWENE 445 (903)
Q Consensus 369 ~~l~~~v~~L~~~G~k~v~ivd-P~I~~~~~y~~y~~g~~~~~fvk~~--g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~ 445 (903)
.++++||+.+|++|+++|+=+- -|..... ...|+. ...++|...+ |.... +.|-..-.++.||+++++..+.
T Consensus 229 ~efk~lV~~~H~~Gi~VilDvV~NH~~~~~-~~~f~~-~~~~~~~~~~~~g~~~~---~~g~~~~~~~~~~~v~~~i~~~ 303 (605)
T TIGR02104 229 RELKQMIQALHENGIRVIMDVVYNHTYSRE-ESPFEK-TVPGYYYRYNEDGTLSN---GTGVGNDTASEREMMRKFIVDS 303 (605)
T ss_pred HHHHHHHHHHHHCCCEEEEEEEcCCccCCC-CCcccC-CCCCeeEEECCCCCccC---CCcccCCcccCCHHHHHHHHHH
Confidence 4799999999999999987433 3443211 123332 2234554322 32111 1122223577899999999999
Q ss_pred HHHHhccCCCceEEeecc
Q 038998 446 IKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 446 ~~~~~~~~g~dg~W~Dmn 463 (903)
++.+.+..+||||=+|..
T Consensus 304 ~~~W~~e~~iDGfR~D~~ 321 (605)
T TIGR02104 304 VLYWVKEYNIDGFRFDLM 321 (605)
T ss_pred HHHHHHHcCCCEEEEech
Confidence 998988899999999954
No 48
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A.
Probab=91.35 E-value=0.51 Score=56.66 Aligned_cols=133 Identities=22% Similarity=0.310 Sum_probs=71.1
Q ss_pred CCHHHHHHHHHHhHhcCCCceEEEEeccccC-------------CCCccccCCCCCChhHHHHHHHHHHHcCceEEEEec
Q 038998 324 KNVSDLEAVVAGYAKAVIPLEVMWTDIDYMD-------------GYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILD 390 (903)
Q Consensus 324 ~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~-------------~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivd 390 (903)
++.++.++.++.+.+..|- -.++=|+-|-. .|.|+. ++.-+. .-+++.|+.+|+.|++.+...-
T Consensus 115 ~~~~~~~~~i~~L~~yHIN-~~QFYDW~~rH~~Pl~~~~~~~~~~w~D~~-~r~i~~-~~Vk~yI~~ah~~Gmkam~Ynm 191 (559)
T PF13199_consen 115 KSAEDIEAEIDQLNRYHIN-GLQFYDWMYRHHKPLPGTNGQPDQTWTDWA-NRQIST-STVKDYINAAHKYGMKAMAYNM 191 (559)
T ss_dssp GGHHHHHHHHHHHHHTT---EEEETS--SBTTB-S-SSS-EEE-TT-TTT---EEEH-HHHHHHHHHHHHTT-EEEEEEE
T ss_pred CCchhHHHHHHHHHhhCcC-eEEEEeeccccCCcCCCCCCchhhhhhhhc-CCEehH-HHHHHHHHHHHHcCcceehhHh
Confidence 3567888889999887763 22333333211 122221 122222 2478999999999999987632
Q ss_pred CCCCCCCChHHHHHhHhCCeee-ecC-CcC----eeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeec
Q 038998 391 PGISVNNSYETYIRGIEADIFI-KRD-GVP----YVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDM 462 (903)
Q Consensus 391 P~I~~~~~y~~y~~g~~~~~fv-k~~-g~~----~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dm 462 (903)
.-...++|.. .|+....++ +++ +.. ..+..|+..-.+.|-.||.=++++.++.++.++.+|||||=+|.
T Consensus 192 -iyaa~~~~~~--~gv~~eW~ly~d~~~~~~~~~~l~~~w~s~lyl~dP~N~~WQ~yI~~q~~~~~~~~gFDG~hlDq 266 (559)
T PF13199_consen 192 -IYAANNNYEE--DGVSPEWGLYKDDSHSNQDTYDLPDGWPSDLYLMDPGNPEWQNYIINQMNKAIQNFGFDGWHLDQ 266 (559)
T ss_dssp -SSEEETT--S----SS-GGBEEESSSBTSB-EEEETT-E--EEEEB-TT-HHHHHHHHHHHHHHHHHHT--EEEEE-
T ss_pred -hhccccCccc--ccCCchhhhhhccCCCccceeecCcccccceEEecCCCHHHHHHHHHHHHHHHHccCCceEeeec
Confidence 2222233322 333333333 222 321 12455776667889999998888999988888889999999995
No 49
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=91.17 E-value=2.5 Score=47.38 Aligned_cols=126 Identities=15% Similarity=0.204 Sum_probs=81.5
Q ss_pred eeeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccCCCCccccC-----------CCCCChhHHHHHHHHHHHcCceEE
Q 038998 318 QCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLD-----------PINFPADQMKKFVDTLHQNGQRYV 386 (903)
Q Consensus 318 qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dFt~d-----------~~~FP~~~l~~~v~~L~~~G~k~v 386 (903)
.+.+.-.+.+.+.++++..++.++ .++++|+- +..+.-+++ ...+. .+++++++.||++|+.++
T Consensus 4 lt~~~a~~~~~~~~~~~~i~~t~l--NavVIDvK--dd~G~i~y~s~~~~~~~~ga~~~~i-~D~~~l~~~l~e~gIY~I 78 (316)
T PF13200_consen 4 LTAYSAGSPERLDKLLDLIKRTEL--NAVVIDVK--DDDGNITYDSQVPLAREIGAVKPYI-KDLKALVKKLKEHGIYPI 78 (316)
T ss_pred echhhcCCHHHHHHHHHHHHhcCC--ceEEEEEe--cCCceEEecCCCchhhhcccccccc-cCHHHHHHHHHHCCCEEE
Confidence 344555677788889999988887 77888853 222222221 11221 257999999999999777
Q ss_pred EEe----cCCCCCCCChHHHHHhHhCCeeeecC-CcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEee
Q 038998 387 LIL----DPGISVNNSYETYIRGIEADIFIKRD-GVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLD 461 (903)
Q Consensus 387 ~iv----dP~I~~~~~y~~y~~g~~~~~fvk~~-g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~D 461 (903)
..| ||.+.. . ..++-++.. |+++... . .-.|+|-++++++++-.+..++.. .+|||.+-+|
T Consensus 79 ARIv~FkD~~la~---------~-~pe~av~~~~G~~w~d~--~-~~~WvnP~~~evw~Y~i~IA~Eaa-~~GFdEIqfD 144 (316)
T PF13200_consen 79 ARIVVFKDPVLAE---------A-HPEWAVKTKDGSVWRDN--E-GEAWVNPYSKEVWDYNIDIAKEAA-KLGFDEIQFD 144 (316)
T ss_pred EEEEEecChHHhh---------h-ChhhEEECCCCCcccCC--C-CCccCCCCCHHHHHHHHHHHHHHH-HcCCCEEEee
Confidence 655 433321 1 334445433 5443311 2 256899999999998888777665 5899999998
Q ss_pred c
Q 038998 462 M 462 (903)
Q Consensus 462 m 462 (903)
-
T Consensus 145 Y 145 (316)
T PF13200_consen 145 Y 145 (316)
T ss_pred e
Confidence 4
No 50
>PRK12313 glycogen branching enzyme; Provisional
Probab=91.14 E-value=1.7 Score=53.49 Aligned_cols=123 Identities=18% Similarity=0.205 Sum_probs=70.6
Q ss_pred HHHHhHhcCCCceEEEEecc--cc--C--CC---CccccCCCCCCh-hHHHHHHHHHHHcCceEEEEecC-CCCCCCCh-
Q 038998 332 VVAGYAKAVIPLEVMWTDID--YM--D--GY---KDFTLDPINFPA-DQMKKFVDTLHQNGQRYVLILDP-GISVNNSY- 399 (903)
Q Consensus 332 vv~~~~~~~IP~D~iwlDid--y~--~--~~---~dFt~d~~~FP~-~~l~~~v~~L~~~G~k~v~ivdP-~I~~~~~y- 399 (903)
+++.+++.|| ++||+=-= +- . +| ..|..++ +|-. .++++||+++|++|+++++=+-| |...+...
T Consensus 176 ll~yl~~LGv--~~i~L~Pi~~~~~~~~~GY~~~~y~~i~~-~~Gt~~d~k~lv~~~H~~Gi~VilD~V~nH~~~~~~~~ 252 (633)
T PRK12313 176 LIPYVKEMGY--THVEFMPLMEHPLDGSWGYQLTGYFAPTS-RYGTPEDFMYLVDALHQNGIGVILDWVPGHFPKDDDGL 252 (633)
T ss_pred HHHHHHHcCC--CEEEeCchhcCCCCCCCCCCCcCcCcCCC-CCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCcccc
Confidence 4567777665 66665311 10 0 11 1234443 3432 46999999999999999885433 44433211
Q ss_pred HHHHHhHhCCeee-ecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeecc
Q 038998 400 ETYIRGIEADIFI-KRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 400 ~~y~~g~~~~~fv-k~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dmn 463 (903)
..|+ + ...|- .++...+ ...|.. .-.|+.||+++++..+.++.+++..++|||=+|+-
T Consensus 253 ~~~~-~--~~~~~~~~~~~~~-~~~w~~--~~~n~~~~~vr~~l~~~~~~W~~~~~iDG~R~D~~ 311 (633)
T PRK12313 253 AYFD-G--TPLYEYQDPRRAE-NPDWGA--LNFDLGKNEVRSFLISSALFWLDEYHLDGLRVDAV 311 (633)
T ss_pred cccC-C--CcceeecCCCCCc-CCCCCC--cccCCCCHHHHHHHHHHHHHHHHHhCCcEEEEcCh
Confidence 0111 0 00111 1110111 112432 34689999999999998888888899999999965
No 51
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=90.67 E-value=0.98 Score=56.06 Aligned_cols=132 Identities=14% Similarity=0.234 Sum_probs=78.2
Q ss_pred CHHH-HHHHHHHhHhcCCCceEEEEec----cccCCC-----CccccCCCCCCh-hHHHHHHHHHHHcCceEEEEecC-C
Q 038998 325 NVSD-LEAVVAGYAKAVIPLEVMWTDI----DYMDGY-----KDFTLDPINFPA-DQMKKFVDTLHQNGQRYVLILDP-G 392 (903)
Q Consensus 325 ~~~~-v~~vv~~~~~~~IP~D~iwlDi----dy~~~~-----~dFt~d~~~FP~-~~l~~~v~~L~~~G~k~v~ivdP-~ 392 (903)
+-.+ ..+.+..+++.|+ ++||+=- .+...+ ..|..+ .+|-. .++++||+.+|++|+++++=+-| |
T Consensus 248 ty~~~~~~~L~ylk~LG~--t~I~LmPi~e~~~~~~wGY~~~~~fa~~-~~~Gtp~dlk~LVd~aH~~GI~VilDvV~nH 324 (758)
T PLN02447 248 SYREFADDVLPRIKALGY--NAVQLMAIQEHAYYGSFGYHVTNFFAVS-SRSGTPEDLKYLIDKAHSLGLRVLMDVVHSH 324 (758)
T ss_pred CHHHHHHHHHHHHHHcCC--CEEEECCccccCCCCCCCcCcccCcccc-cccCCHHHHHHHHHHHHHCCCEEEEEecccc
Confidence 3344 3567788888776 6676531 111111 123333 24543 36999999999999999885443 4
Q ss_pred CCCCC--ChHHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeeccc
Q 038998 393 ISVNN--SYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMNE 464 (903)
Q Consensus 393 I~~~~--~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~DmnE 464 (903)
.+.+. ....|+ +....+|-... ..+ ...| | +...|+.+|+++++..+.++.+++..+||||=+|.-.
T Consensus 325 ~~~~~~~gl~~fD-g~~~~Yf~~~~-~g~-~~~w-~-~~~~N~~~~eVr~fLl~~~~~Wl~ey~IDGfRfDaV~ 393 (758)
T PLN02447 325 ASKNTLDGLNGFD-GTDGSYFHSGP-RGY-HWLW-D-SRLFNYGNWEVLRFLLSNLRWWLEEYKFDGFRFDGVT 393 (758)
T ss_pred ccccccccccccC-CCCccccccCC-CCC-cCcC-C-CceecCCCHHHHHHHHHHHHHHHHHhCcccccccchh
Confidence 44321 111121 11112332211 100 1234 2 3358999999999999999999988999999999653
No 52
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=90.51 E-value=1.2 Score=48.62 Aligned_cols=131 Identities=21% Similarity=0.396 Sum_probs=77.1
Q ss_pred HHHHHHHHHhHhcCCCceEEEEeccccC-----CC--Ccc-ccCCCCCCh-hHHHHHHHHHHHcCceEEEEecC-CCCCC
Q 038998 327 SDLEAVVAGYAKAVIPLEVMWTDIDYMD-----GY--KDF-TLDPINFPA-DQMKKFVDTLHQNGQRYVLILDP-GISVN 396 (903)
Q Consensus 327 ~~v~~vv~~~~~~~IP~D~iwlDidy~~-----~~--~dF-t~d~~~FP~-~~l~~~v~~L~~~G~k~v~ivdP-~I~~~ 396 (903)
..+.+=++.+++.|| ++||+--=+.. +| .|| ..|+ +|-. .++++||+.+|++|+|+|+=+-| |.+.+
T Consensus 4 ~gi~~kLdyl~~lGv--~~I~l~Pi~~~~~~~~gY~~~d~~~vd~-~~Gt~~d~~~Lv~~~h~~gi~VilD~V~NH~~~~ 80 (316)
T PF00128_consen 4 RGIIDKLDYLKDLGV--NAIWLSPIFESPNGYHGYDPSDYYAVDP-RFGTMEDFKELVDAAHKRGIKVILDVVPNHTSDD 80 (316)
T ss_dssp HHHHHTHHHHHHHTE--SEEEESS-EESSSSTTTTSESEEEEEST-TTBHHHHHHHHHHHHHHTTCEEEEEEETSEEETT
T ss_pred HHHHHhhHHHHHcCC--Cceecccccccccccccccceeeecccc-ccchhhhhhhhhhccccccceEEEeeeccccccc
Confidence 445555667777666 88888522211 11 232 4555 4543 57999999999999999985555 44433
Q ss_pred CChHHHHHhH------hCCeeeecC--------------CcCeeeeeeC----CCc--cccCCCChHHHHHHHHHHHHHh
Q 038998 397 NSYETYIRGI------EADIFIKRD--------------GVPYVGQVWE----GPL--NFPDFVNPATQTFWENEIKLFR 450 (903)
Q Consensus 397 ~~y~~y~~g~------~~~~fvk~~--------------g~~~~g~~Wp----G~~--~~~Dftnp~a~~ww~~~~~~~~ 450 (903)
. +.+.+.. ..+++.-.+ +..+....|. ... .-+|+.||+++++..+.++.+.
T Consensus 81 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~i~~~~~~w~ 158 (316)
T PF00128_consen 81 H--PWFQDSLNYFDNPYSDYYYWRDGEGSPPGNWYSYFGGSNWEYDDWGDEYQFWSDLPDLNYENPEVREYIIDVLKFWI 158 (316)
T ss_dssp S--HHHHHHHTHTTSTTGTTBEEESBTSTTSSTBBCSTTTSSEESCHHTHCHSSSTTSEEBETTSHHHHHHHHHHHHHHH
T ss_pred c--ccccccccccccccccceeecccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhcccccchh
Confidence 2 2333222 234444210 1122211111 112 2356789999999999777776
Q ss_pred ccCCCceEEeecc
Q 038998 451 DILPLDGLWLDMN 463 (903)
Q Consensus 451 ~~~g~dg~W~Dmn 463 (903)
+ .++|||=+|+.
T Consensus 159 ~-~giDGfR~D~~ 170 (316)
T PF00128_consen 159 E-EGIDGFRLDAA 170 (316)
T ss_dssp H-TTESEEEETTG
T ss_pred h-ceEeEEEEccc
Confidence 5 67999999965
No 53
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.44 E-value=1.4 Score=50.90 Aligned_cols=134 Identities=16% Similarity=0.167 Sum_probs=84.2
Q ss_pred CCHHHHHHHHHHhHhcCCCce--EEEEecc--ccCCCCccccC------CCCCChhHHHHHHHHHHHcCceEEEEecCCC
Q 038998 324 KNVSDLEAVVAGYAKAVIPLE--VMWTDID--YMDGYKDFTLD------PINFPADQMKKFVDTLHQNGQRYVLILDPGI 393 (903)
Q Consensus 324 ~~~~~v~~vv~~~~~~~IP~D--~iwlDid--y~~~~~dFt~d------~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I 393 (903)
.+..++.+.+++.++.|+--= .+|.+-| |.....-+.-+ ....=|| ++.+|++-|++|+++..|..|+.
T Consensus 61 ~~~~el~~~ld~l~~ln~NTv~~qV~~~G~~lypS~~~p~s~~~~~~~~~~~g~Dp-La~~I~~AHkr~l~v~aWf~~~~ 139 (418)
T COG1649 61 FQRQELKDILDDLQKLNFNTVYPQVWNDGDALYPSAVLPWSDGLPGVLGVDPGYDP-LAFVIAEAHKRGLEVHAWFNPYR 139 (418)
T ss_pred ccHHHHHHHHHHHHHcCCceeEEEEecCccccccccccccccCcCcccCCCCCCCh-HHHHHHHHHhcCCeeeechhhcc
Confidence 478899999999999987322 2344422 33332222211 1111133 78999999999999999999987
Q ss_pred CCCCChHHHHHhHhCCeeeec-CCcCee-eeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEee
Q 038998 394 SVNNSYETYIRGIEADIFIKR-DGVPYV-GQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLD 461 (903)
Q Consensus 394 ~~~~~y~~y~~g~~~~~fvk~-~g~~~~-g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~D 461 (903)
.....- .+.. ......... +|..+. +.-|- ...|.|=.+|++++|..+.+.+....+.+||+-+|
T Consensus 140 ~a~~~s-~~~~-~~p~~~~~~~~~~~~~~~~~~~-~~~~ldPg~Pevq~~i~~lv~evV~~YdvDGIQfD 206 (418)
T COG1649 140 MAPPTS-PLTK-RHPHWLTTKRPGWVYVRHQGWG-KRVWLDPGIPEVQDFITSLVVEVVRNYDVDGIQFD 206 (418)
T ss_pred cCCCCC-hhHh-hCCCCcccCCCCeEEEecCCce-eeeEeCCCChHHHHHHHHHHHHHHhCCCCCceecc
Confidence 654211 1111 111112211 232221 11111 46789999999999999999998888999999887
No 54
>PRK03705 glycogen debranching enzyme; Provisional
Probab=89.94 E-value=0.96 Score=55.70 Aligned_cols=89 Identities=21% Similarity=0.384 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHcCceEEEEe-cCCCCCC---CChHHHHHhHhC-CeeeecC-CcCeeeeeeCCCccccCCCChHHHHHHH
Q 038998 370 QMKKFVDTLHQNGQRYVLIL-DPGISVN---NSYETYIRGIEA-DIFIKRD-GVPYVGQVWEGPLNFPDFVNPATQTFWE 443 (903)
Q Consensus 370 ~l~~~v~~L~~~G~k~v~iv-dP~I~~~---~~y~~y~~g~~~-~~fvk~~-g~~~~g~~WpG~~~~~Dftnp~a~~ww~ 443 (903)
++++||+.+|++|+++|+=+ --|.... ..+..+ ++... .+|..+. |. + ..|.|-..-+++.||.++++..
T Consensus 243 efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~-~~~d~~~yy~~~~~g~-~--~~~~g~g~~ln~~~p~Vr~~ii 318 (658)
T PRK03705 243 EFRDAVKALHKAGIEVILDVVFNHSAELDLDGPTLSL-RGIDNRSYYWIREDGD-Y--HNWTGCGNTLNLSHPAVVDWAI 318 (658)
T ss_pred HHHHHHHHHHHCCCEEEEEEcccCccCcCCCCcchhc-ccCCCccceEECCCCC-c--CCCCCccCcccCCCHHHHHHHH
Confidence 69999999999999998733 2343321 111111 12222 2332222 32 1 2344433456888999999999
Q ss_pred HHHHHHhccCCCceEEeec
Q 038998 444 NEIKLFRDILPLDGLWLDM 462 (903)
Q Consensus 444 ~~~~~~~~~~g~dg~W~Dm 462 (903)
+.++.+.+.+|+|||=+|.
T Consensus 319 d~l~~W~~e~gVDGFRfD~ 337 (658)
T PRK03705 319 DCLRYWVETCHVDGFRFDL 337 (658)
T ss_pred HHHHHHHHHhCCCEEEEEc
Confidence 9999998889999999995
No 55
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
Probab=89.77 E-value=0.91 Score=56.26 Aligned_cols=94 Identities=17% Similarity=0.264 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHHcCceEEEEecC-CCCCCCCh---HHHHHhHhCCeeee-cCCcCeeeeeeCCCccccCCCChHHHHHHH
Q 038998 369 DQMKKFVDTLHQNGQRYVLILDP-GISVNNSY---ETYIRGIEADIFIK-RDGVPYVGQVWEGPLNFPDFVNPATQTFWE 443 (903)
Q Consensus 369 ~~l~~~v~~L~~~G~k~v~ivdP-~I~~~~~y---~~y~~g~~~~~fvk-~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~ 443 (903)
.++++||+.+|++|+++|+=+-+ |....... ..| ++.....|.. ....+..-..|.|-..-+|+.||.++++..
T Consensus 245 ~efk~LV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~-~~~d~~~yy~~~~~~~~~~~~~~g~gn~ln~~~p~vr~~i~ 323 (688)
T TIGR02100 245 AEFKTMVRALHDAGIEVILDVVYNHTAEGNELGPTLSF-RGIDNASYYRLQPDDKRYYINDTGTGNTLNLSHPRVLQMVM 323 (688)
T ss_pred HHHHHHHHHHHHCCCEEEEEECcCCccCcCCCCCcccc-cCCCCCcceEecCCCCceecCCCCccccccCCCHHHHHHHH
Confidence 47999999999999998874433 33321110 011 1222222222 211110111233333457999999999999
Q ss_pred HHHHHHhccCCCceEEeecc
Q 038998 444 NEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 444 ~~~~~~~~~~g~dg~W~Dmn 463 (903)
+.++.+.+.+|+|||=+|..
T Consensus 324 d~l~~W~~e~gIDGfR~D~a 343 (688)
T TIGR02100 324 DSLRYWVTEMHVDGFRFDLA 343 (688)
T ss_pred HHHHHHHHHcCCcEEEEech
Confidence 99998888899999999964
No 56
>PLN02361 alpha-amylase
Probab=88.92 E-value=4.7 Score=46.81 Aligned_cols=130 Identities=17% Similarity=0.249 Sum_probs=71.1
Q ss_pred HHHHHHHHHhHhcCCCceEEEEecccc----CCC---CccccCCCCCCh-hHHHHHHHHHHHcCceEEEEecC-CCCCC-
Q 038998 327 SDLEAVVAGYAKAVIPLEVMWTDIDYM----DGY---KDFTLDPINFPA-DQMKKFVDTLHQNGQRYVLILDP-GISVN- 396 (903)
Q Consensus 327 ~~v~~vv~~~~~~~IP~D~iwlDidy~----~~~---~dFt~d~~~FP~-~~l~~~v~~L~~~G~k~v~ivdP-~I~~~- 396 (903)
..+.+-++.+++.|| ++||+---+. .+| ..|..|+ +|-. .++++||+.+|++|+|+++=+-+ |....
T Consensus 29 ~~i~~kl~~l~~lG~--t~iwl~P~~~~~~~~GY~~~d~y~~~~-~~Gt~~el~~li~~~h~~gi~vi~D~V~NH~~g~~ 105 (401)
T PLN02361 29 RNLEGKVPDLAKSGF--TSAWLPPPSQSLAPEGYLPQNLYSLNS-AYGSEHLLKSLLRKMKQYNVRAMADIVINHRVGTT 105 (401)
T ss_pred HHHHHHHHHHHHcCC--CEEEeCCCCcCCCCCCCCcccccccCc-ccCCHHHHHHHHHHHHHcCCEEEEEEccccccCCC
Confidence 456666777777776 8888853221 112 1234443 5553 46999999999999998863222 22110
Q ss_pred ----CChHHHHHhHhCCe---ee-ecC-Cc--CeeeeeeCCCcccc--CCCChHHHHHHHHHHHHHhccCCCceEEeecc
Q 038998 397 ----NSYETYIRGIEADI---FI-KRD-GV--PYVGQVWEGPLNFP--DFVNPATQTFWENEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 397 ----~~y~~y~~g~~~~~---fv-k~~-g~--~~~g~~WpG~~~~~--Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dmn 463 (903)
..|..|. +...+. -+ +.. |. .-.+..+ ...| |..||++++...+-++-+.+.+|+|||=+|+.
T Consensus 106 ~~~~~~y~~~~-g~~~~wd~~~~~~~~~g~~~~~~~~~~---~~lpDLd~~np~Vr~~l~~~~~wl~~~~GiDGfRlDav 181 (401)
T PLN02361 106 QGHGGMYNRYD-GIPLPWDEHAVTSCTGGLGNRSTGDNF---NGVPNIDHTQHFVRKDIIGWLIWLRNDVGFQDFRFDFA 181 (401)
T ss_pred CCCCCCcccCC-CCcCCCCccccccccCCCCCccCCCCC---ccCCccCCCCHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 1122221 100000 00 000 10 0011111 2244 66889999988777765555699999999964
No 57
>PRK05402 glycogen branching enzyme; Provisional
Probab=88.50 E-value=4.3 Score=50.87 Aligned_cols=130 Identities=15% Similarity=0.193 Sum_probs=74.7
Q ss_pred CHHHHHH-HHHHhHhcCCCceEEEEecc--cc--C--CC---CccccCCCCCC-hhHHHHHHHHHHHcCceEEEEecC-C
Q 038998 325 NVSDLEA-VVAGYAKAVIPLEVMWTDID--YM--D--GY---KDFTLDPINFP-ADQMKKFVDTLHQNGQRYVLILDP-G 392 (903)
Q Consensus 325 ~~~~v~~-vv~~~~~~~IP~D~iwlDid--y~--~--~~---~dFt~d~~~FP-~~~l~~~v~~L~~~G~k~v~ivdP-~ 392 (903)
+-.++.+ +++.+++.|+ ++||+=-= +. . +| ..|..++. |- ..++++||+.+|++|+++|+=+-| |
T Consensus 263 ~~~~i~~~l~~ylk~LGv--~~i~L~Pi~e~~~~~~~GY~~~~y~ai~~~-~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH 339 (726)
T PRK05402 263 SYRELADQLIPYVKEMGF--THVELLPIAEHPFDGSWGYQPTGYYAPTSR-FGTPDDFRYFVDACHQAGIGVILDWVPAH 339 (726)
T ss_pred CHHHHHHHHHHHHHHcCC--CEEEECCcccCCCCCCCCCCcccCCCcCcc-cCCHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 4455544 3577788776 67776421 10 0 11 12344443 33 247999999999999999874433 4
Q ss_pred CCCCCCh-HHHHHhHhCCee-eecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeecc
Q 038998 393 ISVNNSY-ETYIRGIEADIF-IKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 393 I~~~~~y-~~y~~g~~~~~f-vk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dmn 463 (903)
...+... ..|+ + ...| -...... ....|.+ .-.|+.||+++++..+.++.+++..++|||=+|+-
T Consensus 340 ~~~~~~~~~~~~-~--~~~y~~~~~~~~-~~~~w~~--~~~n~~~~~v~~~l~~~~~~W~~e~~iDG~R~D~v 406 (726)
T PRK05402 340 FPKDAHGLARFD-G--TALYEHADPREG-EHPDWGT--LIFNYGRNEVRNFLVANALYWLEEFHIDGLRVDAV 406 (726)
T ss_pred CCCCccchhccC-C--CcceeccCCcCC-ccCCCCC--ccccCCCHHHHHHHHHHHHHHHHHhCCcEEEECCH
Confidence 4332110 0010 0 0111 1110000 0112322 34699999999999999988888899999999963
No 58
>PRK09505 malS alpha-amylase; Reviewed
Probab=88.48 E-value=3.9 Score=50.66 Aligned_cols=64 Identities=19% Similarity=0.306 Sum_probs=40.8
Q ss_pred CCHHHHHHHHHHhHhcCCCceEEEEecccc-----------------CCCCccccC----CCCCC-hhHHHHHHHHHHHc
Q 038998 324 KNVSDLEAVVAGYAKAVIPLEVMWTDIDYM-----------------DGYKDFTLD----PINFP-ADQMKKFVDTLHQN 381 (903)
Q Consensus 324 ~~~~~v~~vv~~~~~~~IP~D~iwlDidy~-----------------~~~~dFt~d----~~~FP-~~~l~~~v~~L~~~ 381 (903)
.+...+.+-++.+++.|| ++||+---+. ...++++.| ..+|- ..++++||+++|++
T Consensus 227 Gdl~Gi~~kLdyl~~LGv--~aIwlsPi~~~~~~~~~~g~~g~~~~~~yhgY~~~D~~~id~~~Gt~~dfk~Lv~~aH~~ 304 (683)
T PRK09505 227 GDLRGLTEKLDYLQQLGV--NALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTLDWTKLDANMGTEADLRTLVDEAHQR 304 (683)
T ss_pred CCHHHHHHhhHHHHHcCC--CEEEeCccccccccccccccccCCCcCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHC
Confidence 367777777787877776 8888752211 111222222 12343 25799999999999
Q ss_pred CceEEEEe
Q 038998 382 GQRYVLIL 389 (903)
Q Consensus 382 G~k~v~iv 389 (903)
|+|+|+=+
T Consensus 305 Gi~VilD~ 312 (683)
T PRK09505 305 GIRILFDV 312 (683)
T ss_pred CCEEEEEE
Confidence 99988743
No 59
>PLN03244 alpha-amylase; Provisional
Probab=88.41 E-value=0.99 Score=55.61 Aligned_cols=90 Identities=14% Similarity=0.227 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHcCceEEEEecC-CCCCCCChHH-HHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHH
Q 038998 370 QMKKFVDTLHQNGQRYVLILDP-GISVNNSYET-YIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIK 447 (903)
Q Consensus 370 ~l~~~v~~L~~~G~k~v~ivdP-~I~~~~~y~~-y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~ 447 (903)
+++.||+.+|++|+++++=+-| |...+..+.. .-.| ..+.|...+... .-..| |. ...|+.+|+++++..+.++
T Consensus 442 DLK~LVD~aH~~GI~VILDvV~NH~~~d~~~GL~~fDG-t~~~Yf~~~~~g-~~~~W-Gs-~~fnyg~~EVr~FLLsna~ 517 (872)
T PLN03244 442 DFKRLVDEAHGLGLLVFLDIVHSYAAADEMVGLSLFDG-SNDCYFHTGKRG-HHKHW-GT-RMFKYGDLDVLHFLISNLN 517 (872)
T ss_pred HHHHHHHHHHHCCCEEEEEecCccCCCccccchhhcCC-CccceeccCCCC-ccCCC-CC-ceecCCCHHHHHHHHHHHH
Confidence 6999999999999999884443 4444321111 1111 122233222111 12346 43 4679999999999999999
Q ss_pred HHhccCCCceEEeecc
Q 038998 448 LFRDILPLDGLWLDMN 463 (903)
Q Consensus 448 ~~~~~~g~dg~W~Dmn 463 (903)
-+++..+||||=+|.-
T Consensus 518 yWleEyhIDGFRfDaV 533 (872)
T PLN03244 518 WWITEYQIDGFQFHSL 533 (872)
T ss_pred HHHHHhCcCcceeecc
Confidence 9998999999999953
No 60
>PRK12568 glycogen branching enzyme; Provisional
Probab=87.14 E-value=4.2 Score=50.48 Aligned_cols=126 Identities=15% Similarity=0.165 Sum_probs=72.3
Q ss_pred HHHHHHhHhcCCCceEEEEecc--c----cCCC---CccccCCCCCCh-hHHHHHHHHHHHcCceEEEEecC-CCCCCCC
Q 038998 330 EAVVAGYAKAVIPLEVMWTDID--Y----MDGY---KDFTLDPINFPA-DQMKKFVDTLHQNGQRYVLILDP-GISVNNS 398 (903)
Q Consensus 330 ~~vv~~~~~~~IP~D~iwlDid--y----~~~~---~dFt~d~~~FP~-~~l~~~v~~L~~~G~k~v~ivdP-~I~~~~~ 398 (903)
++++..+++.|+ ..||+=-= + .-+| ..|..++ +|.. .+++.||+.+|++|+++++=+-| |...+..
T Consensus 273 ~~ll~ylk~LGv--t~I~LmPi~e~~~~~~wGY~~~~~~a~~~-~~G~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~d~~ 349 (730)
T PRK12568 273 EQLIPYVQQLGF--THIELLPITEHPFGGSWGYQPLGLYAPTA-RHGSPDGFAQFVDACHRAGIGVILDWVSAHFPDDAH 349 (730)
T ss_pred HHHHHHHHHcCC--CEEEECccccCCCCCCCCCCCCcCCccCc-ccCCHHHHHHHHHHHHHCCCEEEEEeccccCCcccc
Confidence 345677777776 55655211 0 0011 2344443 4543 36999999999999999885544 4433211
Q ss_pred -hHHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeecc
Q 038998 399 -YETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 399 -y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dmn 463 (903)
...|+. ..+|-..+...-....|. +...||.+|+++++..+.++.+++..++|||=+|.-
T Consensus 350 ~l~~fdg---~~~Ye~~d~~~g~~~~W~--~~~~N~~~peVr~~li~~a~~Wl~eyhIDG~R~DAv 410 (730)
T PRK12568 350 GLAQFDG---AALYEHADPREGMHRDWN--TLIYNYGRPEVTAYLLGSALEWIEHYHLDGLRVDAV 410 (730)
T ss_pred ccccCCC---ccccccCCCcCCccCCCC--CeecccCCHHHHHHHHHHHHHHHHHhCceEEEEcCH
Confidence 001110 011110000000112342 234799999999999999988888899999999953
No 61
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism]
Probab=87.09 E-value=1.7 Score=53.56 Aligned_cols=91 Identities=21% Similarity=0.341 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHcCceEEE-EecCCCCCCC-ChHH-HHHhHhCCeeeecC--CcCeeeeeeCCCccccCCCChHHHHHHHH
Q 038998 370 QMKKFVDTLHQNGQRYVL-ILDPGISVNN-SYET-YIRGIEADIFIKRD--GVPYVGQVWEGPLNFPDFVNPATQTFWEN 444 (903)
Q Consensus 370 ~l~~~v~~L~~~G~k~v~-ivdP~I~~~~-~y~~-y~~g~~~~~fvk~~--g~~~~g~~WpG~~~~~Dftnp~a~~ww~~ 444 (903)
++|.||+.||++|+.+|+ .|=.|..... .-+. --+++..++|-..+ |.. .-|.|-..-+.-.||-+++|--+
T Consensus 266 EfK~mV~~lHkaGI~VILDVVfNHTae~~~~g~t~~f~~id~~~Yyr~~~dg~~---~N~TGcGNtln~~hpmvrk~ivD 342 (697)
T COG1523 266 EFKDMVKALHKAGIEVILDVVFNHTAEGNELGPTLSFRGIDPNYYYRLDPDGYY---SNGTGCGNTLNTEHPMVRKLIVD 342 (697)
T ss_pred HHHHHHHHHHHcCCEEEEEEeccCcccccCcCcccccccCCcCceEEECCCCCe---ecCCccCcccccCChHHHHHHHH
Confidence 689999999999999887 3334443210 0011 12566777655433 221 22555555678899999999999
Q ss_pred HHHHHhccCCCceEEeecc
Q 038998 445 EIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 445 ~~~~~~~~~g~dg~W~Dmn 463 (903)
.|+.+...++||||=+|+.
T Consensus 343 sLrYWv~e~hVDGFRFDLa 361 (697)
T COG1523 343 SLRYWVEEYHVDGFRFDLA 361 (697)
T ss_pred HHHHHHHHhCCCceeecch
Confidence 9999999999999999985
No 62
>PLN02784 alpha-amylase
Probab=87.07 E-value=5.1 Score=50.22 Aligned_cols=134 Identities=17% Similarity=0.219 Sum_probs=73.3
Q ss_pred HHHHHHHHHhHhcCCCceEEEEecccc----CCC--C-ccccCCCCCCh-hHHHHHHHHHHHcCceEEEEec-CCCCCC-
Q 038998 327 SDLEAVVAGYAKAVIPLEVMWTDIDYM----DGY--K-DFTLDPINFPA-DQMKKFVDTLHQNGQRYVLILD-PGISVN- 396 (903)
Q Consensus 327 ~~v~~vv~~~~~~~IP~D~iwlDidy~----~~~--~-dFt~d~~~FP~-~~l~~~v~~L~~~G~k~v~ivd-P~I~~~- 396 (903)
..+.+-++.+++.|| ++||+---+- .+| . .|..| .+|-. .+|+.||+.+|++|+++++=+- -|....
T Consensus 521 ~~I~ekldyL~~LG~--taIWLpP~~~s~s~~GY~p~D~y~ld-s~yGT~~ELk~LI~a~H~~GIkVIlDiViNH~ag~f 597 (894)
T PLN02784 521 MELGEKAAELSSLGF--TVVWLPPPTESVSPEGYMPKDLYNLN-SRYGTIDELKDLVKSFHEVGIKVLGDAVLNHRCAHF 597 (894)
T ss_pred HHHHHHHHHHHHhCC--CEEEeCCCCCCCCCCCcCcccccccC-cCcCCHHHHHHHHHHHHHCCCEEEEEECcccccccc
Confidence 466777788888777 8888853221 122 1 24455 35553 5799999999999999886322 222211
Q ss_pred ----CChHHHHHhHhCCee-eecCCcCee--eeeeCCC--ccc--cCCCChHHHHHHHHHHHHHhccCCCceEEeecc
Q 038998 397 ----NSYETYIRGIEADIF-IKRDGVPYV--GQVWEGP--LNF--PDFVNPATQTFWENEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 397 ----~~y~~y~~g~~~~~f-vk~~g~~~~--g~~WpG~--~~~--~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dmn 463 (903)
..+..|..-..-+-. +..+...|. |.+|.|. ..+ +|..||++++...+-++-+.+.+|+|||=+|+-
T Consensus 598 ~~~~g~~~~f~g~~dW~d~~i~~ddp~F~GrG~~~sgddf~~lPDLDh~npeVR~eL~~WlkWL~~e~G~DGfRLDaV 675 (894)
T PLN02784 598 QNQNGVWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDLKEWLCWMRKEVGYDGWRLDFV 675 (894)
T ss_pred cCCCCcccccCCeecCCCCcccCCCcccCCcCCcCcccccCcCCcCCCCCHHHHHHHHHHHHHHHhccCCCEEEEecc
Confidence 111122110000000 000001111 2223222 233 466789999877666665666799999999975
No 63
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102).
Probab=86.97 E-value=1.3 Score=56.01 Aligned_cols=88 Identities=10% Similarity=0.170 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHcCceEEEEe-cCCCCCCCC--hHHHHHhHhCCeeeecC--CcCeeeeeeCCCccccCCCChHHHHHHHH
Q 038998 370 QMKKFVDTLHQNGQRYVLIL-DPGISVNNS--YETYIRGIEADIFIKRD--GVPYVGQVWEGPLNFPDFVNPATQTFWEN 444 (903)
Q Consensus 370 ~l~~~v~~L~~~G~k~v~iv-dP~I~~~~~--y~~y~~g~~~~~fvk~~--g~~~~g~~WpG~~~~~Dftnp~a~~ww~~ 444 (903)
++++||+.||++|+++|+=+ --|...... ...++. ...++|.+.+ |....+.||. -.+..||.++++..+
T Consensus 405 Efk~mV~alH~~Gi~VIlDVVyNHt~~~g~~~~s~ld~-~~P~YY~r~~~~G~~~n~~~~~----d~a~e~~~Vrk~iiD 479 (898)
T TIGR02103 405 EFREMVQALNKTGLNVVMDVVYNHTNASGPNDRSVLDK-IVPGYYHRLNEDGGVENSTCCS----NTATEHRMMAKLIVD 479 (898)
T ss_pred HHHHHHHHHHHCCCEEEEEeecccccccCccCcccccc-cCcHhhEeeCCCCCeecCCCCc----CCCCCCHHHHHHHHH
Confidence 68999999999999998733 334332110 011221 1234555433 3221222332 136789999999999
Q ss_pred HHHHHhccCCCceEEeec
Q 038998 445 EIKLFRDILPLDGLWLDM 462 (903)
Q Consensus 445 ~~~~~~~~~g~dg~W~Dm 462 (903)
.++.+.+.++||||=+|.
T Consensus 480 sl~~W~~ey~VDGFRfDl 497 (898)
T TIGR02103 480 SLVVWAKDYKVDGFRFDL 497 (898)
T ss_pred HHHHHHHHcCCCEEEEec
Confidence 999988889999999994
No 64
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=86.94 E-value=0.21 Score=61.15 Aligned_cols=167 Identities=5% Similarity=-0.196 Sum_probs=123.4
Q ss_pred hHHHHHHHHHHHHh-CCCCEEEecccccCCCCcccccCCCCcCchHHHHHhHHHHHhcccccCCeEeeccCCCCCCCChH
Q 038998 522 LEAKATRAALINAV-GKRPFMLTRSTFVSSGKYTAHWTGDNAATWDDLAYTIPSILNFGLFGIPMVGADICGFQRNTTEE 600 (903)
Q Consensus 522 ~~~~at~~al~~~~-~~RpfilsRS~f~Gsqry~~~WtGDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~E 600 (903)
+.++..+.+.+.+. .++.+-++ +..++.++++.+|.+++.+.|-..-.++.- ..+..+.+++...+++|.-....++
T Consensus 471 yd~~~lyg~~~aiat~~a~~~v~-~kr~~i~srsTf~g~g~y~~hwlgdn~~~w-~~L~~sI~gml~fnl~Gip~Vg~Di 548 (805)
T KOG1065|consen 471 YDTHNLYGYSEAIATHQALVDVP-GKRSFILSRSTFVGSGRYAGHWLGDNTARW-EDLQTSISGMLEFNLFGIPMVGSDI 548 (805)
T ss_pred hhhhhhHhHHHhhhhhccceecc-ccccccccccceecccccceeeccccccee-hhccccchhhhcccccCCCccchhh
Confidence 44566677766654 55666665 889999999999988777655433333433 5666677778899999998777777
Q ss_pred HHHHHHHhccccccccccCCCCCCCccccCchHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcCCcccccCCCCCCCCccc
Q 038998 601 LCRRWIQLGAFYPFARDHSDKFKIRQELYLWDSVAATARKVLGLRYRLLPYFYTLMYEAHTKGTPIARPLFFSFPQDART 680 (903)
Q Consensus 601 L~~RW~QlgaF~Pf~R~H~~~~~~~qePw~~~~~~~~~r~~i~lRY~LLPYlYtl~~~a~~~G~Pv~RPL~~efP~D~~~ 680 (903)
++ ++|...|..++|........++.++.......|..+..|++ +.+++.......+.++-+++.+.||.-..-
T Consensus 549 cg----f~~~~~eELc~RW~q~gaF~Pf~R~hn~~~~~~qe~~~~~s---v~~a~r~~~~~ry~~lP~lytl~~~A~~sG 621 (805)
T KOG1065|consen 549 CG----FLGPPTEELCLRWLQLGAFYPFSRNHNSPGEPRQEPYTWSS---VAEAARNALTLRYTLLPYLYTLFYRAHVSG 621 (805)
T ss_pred hc----CCCCCCHHHHHHHHHhccCCchhhccCCCCCcccChhhHHH---HHHHHHHhhhheeeehhhHHHhhhhhhhcC
Confidence 66 89999998888877666666666665555667777888888 888888888899999999999999987665
Q ss_pred cccCceeeecCcceEee
Q 038998 681 YEISTQFLIGKGVIVSP 697 (903)
Q Consensus 681 ~~i~~Qfm~G~~LLVaP 697 (903)
..+..++|++-...-++
T Consensus 622 ~pV~RPlf~~fP~D~~~ 638 (805)
T KOG1065|consen 622 EPVARPLFFEFPTDPAT 638 (805)
T ss_pred CcceeeeeeecCCChhh
Confidence 56666766665444444
No 65
>TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type. Assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by PubMed:11333988 but challenged by PubMed:14679218. Members of this family from Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal), species lacking a conventional cysteinyl-tRNA synthetase (Cys--tRNA ligase), have been indicated to be a novel form of that enzyme, perhaps distantly related to class I tRNA ligases. The member from Thermotoga maritima is presumed to be a second isozyme of cysteinyl-tRNA synthetase. A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases.
Probab=86.81 E-value=1.9 Score=48.25 Aligned_cols=102 Identities=17% Similarity=0.263 Sum_probs=63.1
Q ss_pred CceEEEEeccccCCCCccccCCCCCChhHHHHHHHHHHHcCceEEEEecCCCCCCCChHHH-HHhHh---CCeeeecCCc
Q 038998 342 PLEVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETY-IRGIE---ADIFIKRDGV 417 (903)
Q Consensus 342 P~D~iwlDidy~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~~y~~y-~~g~~---~~~fvk~~g~ 417 (903)
++|.+.+|.+.-.. +...|+ ++-++.||+.|.+++..+.-+ .-+.|..| ++... ..++ |.
T Consensus 64 ~~d~vVID~~~~g~------~~~~fs----~~~i~~Lk~~g~~viaYlSvG--e~E~~R~y~~~~~~~~~~~~l----~~ 127 (315)
T TIGR01370 64 PFELVVIDYSKDGT------EDGTYS----PEEIVRAAAAGRWPIAYLSIG--AAEDYRFYWQKGWKVNAPAWL----GN 127 (315)
T ss_pred CCCEEEEccccccC------cccCCC----HHHHHHHHhCCcEEEEEEEch--hccccchhhhhhhhcCCHHHh----CC
Confidence 57888877654311 122343 345788999999988877633 22344444 22111 1111 22
Q ss_pred CeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeecc
Q 038998 418 PYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 418 ~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dmn 463 (903)
.. ..|||. .++|+.+|+-++...+.++.+. ..|+||+.+|.-
T Consensus 128 ~n--~~W~g~-~~vd~~~~~W~~il~~rl~~l~-~kGfDGvfLD~l 169 (315)
T TIGR01370 128 ED--PDWPGN-YDVKYWDPEWKAIAFSYLDRVI-AQGFDGVYLDLI 169 (315)
T ss_pred CC--CCCCCc-eeEecccHHHHHHHHHHHHHHH-HcCCCeEeeccc
Confidence 22 348885 7899999997777777776665 479999999853
No 66
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=86.73 E-value=4.3 Score=48.26 Aligned_cols=32 Identities=25% Similarity=0.362 Sum_probs=26.5
Q ss_pred CCCChHHHHHHHHHHHHHhccCCCceEEeecc
Q 038998 432 DFVNPATQTFWENEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 432 Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dmn 463 (903)
|..||++++...+.++.+++..|+|||=+|.-
T Consensus 204 n~~np~V~~~l~~~~~~w~~~~giDGfRlDav 235 (479)
T PRK09441 204 DFRHPEVREELKYWAKWYMETTGFDGFRLDAV 235 (479)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCCEEEEhhh
Confidence 45789999988887777776699999999964
No 67
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645).
Probab=85.60 E-value=2.2 Score=55.35 Aligned_cols=87 Identities=18% Similarity=0.331 Sum_probs=58.7
Q ss_pred hHHHHHHHHHHHcCceEEEEe-cCCCCCCCChHHHHHhHhCCeeeec--CCcCeeeeeeCCCccccCCCChHHHHHHHHH
Q 038998 369 DQMKKFVDTLHQNGQRYVLIL-DPGISVNNSYETYIRGIEADIFIKR--DGVPYVGQVWEGPLNFPDFVNPATQTFWENE 445 (903)
Q Consensus 369 ~~l~~~v~~L~~~G~k~v~iv-dP~I~~~~~y~~y~~g~~~~~fvk~--~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~ 445 (903)
.+|++||+.||++|+++|+=+ --|..... .|+. ...++|... +|.+.. .|.| .-.+..||.++++..+.
T Consensus 555 ~EfK~LV~alH~~GI~VILDVVyNHt~~~~---~f~~-~~p~Yy~~~~~~G~~~~--~~~g--~~l~~e~~~vrk~iiDs 626 (1111)
T TIGR02102 555 AEFKNLINEIHKRGMGVILDVVYNHTAKVY---IFED-LEPNYYHFMDADGTPRT--SFGG--GRLGTTHEMSRRILVDS 626 (1111)
T ss_pred HHHHHHHHHHHHCCCEEEEecccccccccc---cccc-cCCCceEeeCCCCCccc--ccCC--CCCCcCCHHHHHHHHHH
Confidence 369999999999999998743 23333221 2332 233454432 244432 2323 23677899999999999
Q ss_pred HHHHhccCCCceEEeecc
Q 038998 446 IKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 446 ~~~~~~~~g~dg~W~Dmn 463 (903)
++.+.+.++||||=+|+-
T Consensus 627 l~yWv~ey~VDGFRfDl~ 644 (1111)
T TIGR02102 627 IKYLVDEFKVDGFRFDMM 644 (1111)
T ss_pred HHHHHHhcCCcEEEEecc
Confidence 999988899999999953
No 68
>KOG2366 consensus Alpha-D-galactosidase (melibiase) [Carbohydrate transport and metabolism]
Probab=85.26 E-value=5.4 Score=45.14 Aligned_cols=66 Identities=20% Similarity=0.308 Sum_probs=51.1
Q ss_pred HHHHHHHHHHhHhc---CCCceEEEEeccccCCCCccc----cCCCCCChhHHHHHHHHHHHcCceEEEEecCC
Q 038998 326 VSDLEAVVAGYAKA---VIPLEVMWTDIDYMDGYKDFT----LDPINFPADQMKKFVDTLHQNGQRYVLILDPG 392 (903)
Q Consensus 326 ~~~v~~vv~~~~~~---~IP~D~iwlDidy~~~~~dFt----~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~ 392 (903)
+.-.+++.+.+.+. .+-+.-|-+|.=|.+..+|++ -|+.+||. +++.+.+.+|.+|.|+.+..|-+
T Consensus 59 E~l~~~~ad~mvseG~~~vGY~yi~iDDCW~e~~Rd~~grLva~~~rFP~-Gi~~ladyvHs~GLKlGiYsD~G 131 (414)
T KOG2366|consen 59 EQLFKEMADAMVSEGLADVGYEYINIDDCWSEVTRDSDGRLVADPSRFPS-GIKALADYVHSKGLKLGIYSDAG 131 (414)
T ss_pred HHHHHHHHHHHHHhHHHhcCcEEEechhhhhhhccCCccccccChhhccc-chhhhhhchhhcCCceeeeeccC
Confidence 44456677776665 356677888867888777775 47899997 78999999999999999877654
No 69
>PRK14705 glycogen branching enzyme; Provisional
Probab=84.95 E-value=6.5 Score=51.56 Aligned_cols=127 Identities=19% Similarity=0.207 Sum_probs=73.9
Q ss_pred HHHHHHHhHhcCCCceEEEEec--ccc--C--CC---CccccCCCCCCh-hHHHHHHHHHHHcCceEEEEecC-CCCCCC
Q 038998 329 LEAVVAGYAKAVIPLEVMWTDI--DYM--D--GY---KDFTLDPINFPA-DQMKKFVDTLHQNGQRYVLILDP-GISVNN 397 (903)
Q Consensus 329 v~~vv~~~~~~~IP~D~iwlDi--dy~--~--~~---~dFt~d~~~FP~-~~l~~~v~~L~~~G~k~v~ivdP-~I~~~~ 397 (903)
+.++++.+++.|+ +.||+=- ++. . +| ..|..+ .+|-. .+++.||+.+|++|+++|+=+-| |...+.
T Consensus 768 ~~~lldYlk~LGv--t~IeLmPv~e~p~~~swGY~~~~y~ap~-~ryGt~~dfk~lVd~~H~~GI~VILD~V~nH~~~d~ 844 (1224)
T PRK14705 768 AKELVDYVKWLGF--THVEFMPVAEHPFGGSWGYQVTSYFAPT-SRFGHPDEFRFLVDSLHQAGIGVLLDWVPAHFPKDS 844 (1224)
T ss_pred HHHHHHHHHHhCC--CEEEECccccCCCCCCCCCCccccCCcC-cccCCHHHHHHHHHHHHHCCCEEEEEeccccCCcch
Confidence 3455778888776 6666521 110 0 11 123333 24443 36999999999999999885444 443321
Q ss_pred ChHHHHHhHhC-CeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeecc
Q 038998 398 SYETYIRGIEA-DIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 398 ~y~~y~~g~~~-~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dmn 463 (903)
. +....+. .+|-..+...-....|.. ...||.+|+++++..+.+..+++.+++|||=+|.-
T Consensus 845 ~---~l~~fdg~~~y~~~d~~~g~~~~Wg~--~~fn~~~~eVr~fli~~a~~Wl~eyhiDGfR~Dav 906 (1224)
T PRK14705 845 W---ALAQFDGQPLYEHADPALGEHPDWGT--LIFDFGRTEVRNFLVANALYWLDEFHIDGLRVDAV 906 (1224)
T ss_pred h---hhhhcCCCcccccCCcccCCCCCCCC--ceecCCCHHHHHHHHHHHHHHHHHhCCCcEEEeeh
Confidence 1 1000111 011111100001234532 34799999999999999999998899999999974
No 70
>KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism]
Probab=83.95 E-value=3.8 Score=49.55 Aligned_cols=125 Identities=15% Similarity=0.225 Sum_probs=73.1
Q ss_pred CCCceEEEEeccccCC-------CCccccCCCCCCh-hHHHHHHHHHHHcCceEEEEecCCCCCCCC-h---HHHHHhHh
Q 038998 340 VIPLEVMWTDIDYMDG-------YKDFTLDPINFPA-DQMKKFVDTLHQNGQRYVLILDPGISVNNS-Y---ETYIRGIE 407 (903)
Q Consensus 340 ~IP~D~iwlDidy~~~-------~~dFt~d~~~FP~-~~l~~~v~~L~~~G~k~v~ivdP~I~~~~~-y---~~y~~g~~ 407 (903)
++.++++|+---+-.- -.||+.=..+|.. .+++++++++|+.|+++|+-+-|--..++. + ....+...
T Consensus 51 ~lG~taiWisP~~~s~~~~~GY~~~d~~~l~p~fGt~edf~~Li~~~h~~gi~ii~D~viNh~~~~~~wf~~~~~~~~~y 130 (545)
T KOG0471|consen 51 ELGFTAIWLSPFTKSSKPDFGYDASDLEQLRPRFGTEEDFKELILAMHKLGIKIIADLVINHRSDEVEWFKASPTSKTGY 130 (545)
T ss_pred hcCCceEEeCCCcCCCHHHhccCccchhhhcccccHHHHHHHHHHHHhhcceEEEEeeccccCCccccccccCccccccc
Confidence 4667999985433221 2244332346764 568999999999999998765443221100 0 00011112
Q ss_pred CCeeeecCCc---------------CeeeeeeC----------CC----ccccCCCChHHHHHHHHHHHHHhccCCCceE
Q 038998 408 ADIFIKRDGV---------------PYVGQVWE----------GP----LNFPDFVNPATQTFWENEIKLFRDILPLDGL 458 (903)
Q Consensus 408 ~~~fvk~~g~---------------~~~g~~Wp----------G~----~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~ 458 (903)
.+++.-.+|. -+.+..|| |. ..=+|+.||++++-+.+.++.+....|+|||
T Consensus 131 ~d~~~~~~~~~~~~g~~~~p~nw~~~~~~s~~~~~e~~~~~~l~~~~~~~pDln~~n~~V~~~~~~~l~~~~~~~gvdGf 210 (545)
T KOG0471|consen 131 EDWYPWHDGSSLDVGKRIPPLNWLSVFGGSAWPFDEGRQKYYLGQFAVLQPDLNYENPDVRKAIKEWLRDFWLEKGVDGF 210 (545)
T ss_pred eeeeeccCcccccccCCCCccchHhhhccccCcccccccceeccchhhcCCCCCCCCHHHHHHHHHHHHHHHhhcCCCeE
Confidence 2233322221 12233444 21 1226889999999999999977777999999
Q ss_pred Eeeccc
Q 038998 459 WLDMNE 464 (903)
Q Consensus 459 W~DmnE 464 (903)
=+|+..
T Consensus 211 RiD~v~ 216 (545)
T KOG0471|consen 211 RIDAVK 216 (545)
T ss_pred EEEccc
Confidence 999864
No 71
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism]
Probab=81.72 E-value=2.8 Score=51.06 Aligned_cols=90 Identities=17% Similarity=0.342 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHcCceEEE-EecCCCCCCC--ChHHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHHH
Q 038998 370 QMKKFVDTLHQNGQRYVL-ILDPGISVNN--SYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEI 446 (903)
Q Consensus 370 ~l~~~v~~L~~~G~k~v~-ivdP~I~~~~--~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~ 446 (903)
++|+||+++|..|+-+++ +|.-|.+.++ .+..| +|...++|.... . .|.-|-+.+...+..+|.+..+-.+.+
T Consensus 312 efK~lVd~aHs~GI~VlLDVV~sHaa~n~~d~l~~f-dGid~~~Yf~~~-~--r~~h~~~~~r~fn~~~~~V~rflL~nL 387 (757)
T KOG0470|consen 312 EFKELVDKAHSLGIEVLLDVVHSHAAKNSKDGLNMF-DGIDNSVYFHSG-P--RGYHNSWCSRLFNYNHPVVLRFLLSNL 387 (757)
T ss_pred HHHHHHHHHhhCCcEEehhhhhhhcccCcCCcchhc-cCcCCceEEEeC-C--cccccccccccccCCCHHHHHHHHHHH
Confidence 699999999999998766 4455555432 22333 566645444322 1 334445566778999999999988888
Q ss_pred HHHhccCCCceEEeecc
Q 038998 447 KLFRDILPLDGLWLDMN 463 (903)
Q Consensus 447 ~~~~~~~g~dg~W~Dmn 463 (903)
+.+...+.+|||=+|..
T Consensus 388 r~WVtEY~vDGFRFD~~ 404 (757)
T KOG0470|consen 388 RWWVTEYHVDGFRFDLV 404 (757)
T ss_pred HHHHHheeccceEEcch
Confidence 88888899999999854
No 72
>PRK14706 glycogen branching enzyme; Provisional
Probab=80.97 E-value=3.9 Score=50.31 Aligned_cols=89 Identities=17% Similarity=0.205 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHcCceEEEEecC-CCCCCCChHHHHHhHh-CCee-eecCCcCeeeeeeCCCccccCCCChHHHHHHHHH
Q 038998 369 DQMKKFVDTLHQNGQRYVLILDP-GISVNNSYETYIRGIE-ADIF-IKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENE 445 (903)
Q Consensus 369 ~~l~~~v~~L~~~G~k~v~ivdP-~I~~~~~y~~y~~g~~-~~~f-vk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~ 445 (903)
.+++.||+.+|++|+++++=+-| |...+... . ...+ ..++ ..++ ..-.-..|. +...|+.||+++++..+.
T Consensus 217 ~~~~~lv~~~H~~gi~VilD~v~nH~~~~~~~-l--~~~dg~~~y~~~~~-~~g~~~~w~--~~~~~~~~~eVr~~l~~~ 290 (639)
T PRK14706 217 EDFKYLVNHLHGLGIGVILDWVPGHFPTDESG-L--AHFDGGPLYEYADP-RKGYHYDWN--TYIFDYGRNEVVMFLIGS 290 (639)
T ss_pred HHHHHHHHHHHHCCCEEEEEecccccCcchhh-h--hccCCCcceeccCC-cCCcCCCCC--CcccCCCCHHHHHHHHHH
Confidence 36999999999999999875444 44332110 0 0000 0011 1111 000012342 234799999999999999
Q ss_pred HHHHhccCCCceEEeecc
Q 038998 446 IKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 446 ~~~~~~~~g~dg~W~Dmn 463 (903)
++.+++..++|||=+|.-
T Consensus 291 ~~~W~~e~~iDG~R~Dav 308 (639)
T PRK14706 291 ALKWLQDFHVDGLRVDAV 308 (639)
T ss_pred HHHHHHHhCCCeEEEeee
Confidence 998888899999999953
No 73
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism]
Probab=80.82 E-value=28 Score=41.08 Aligned_cols=133 Identities=19% Similarity=0.325 Sum_probs=79.6
Q ss_pred CCHHHHHHHHHHhHhcCCCceEEEEeccccC---CC----Ccc-ccCCCCCCh-hHHHHHHHHHHHcCceEEEEecC-CC
Q 038998 324 KNVSDLEAVVAGYAKAVIPLEVMWTDIDYMD---GY----KDF-TLDPINFPA-DQMKKFVDTLHQNGQRYVLILDP-GI 393 (903)
Q Consensus 324 ~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~---~~----~dF-t~d~~~FP~-~~l~~~v~~L~~~G~k~v~ivdP-~I 393 (903)
.+..-+.+-++-+++.|+ |+||+---+-. .. .|| ..|+ .|.. .+++++++++|++|+|+++=+-. |.
T Consensus 26 Gdl~Gi~~~LdYl~~LGv--~aiwl~Pi~~s~~~~~gY~~~Dy~~id~-~~Gt~~d~~~li~~~H~~gi~vi~D~V~NH~ 102 (505)
T COG0366 26 GDLKGITEKLDYLKELGV--DAIWLSPIFESPQADHGYDVSDYTKVDP-HFGTEEDFKELVEEAHKRGIKVILDLVFNHT 102 (505)
T ss_pred ccHHhHHHhhhHHHHhCC--CEEEeCCCCCCCccCCCccccchhhcCc-ccCCHHHHHHHHHHHHHCCCEEEEEeccCcC
Confidence 356666677777777776 99998633322 11 222 3344 5553 57899999999999998874432 22
Q ss_pred CCCCChHHHHHhHh-------CCeeeec--------C---CcCeeeeeeC-----------CC-ccc-cCCCChHHHHHH
Q 038998 394 SVNNSYETYIRGIE-------ADIFIKR--------D---GVPYVGQVWE-----------GP-LNF-PDFVNPATQTFW 442 (903)
Q Consensus 394 ~~~~~y~~y~~g~~-------~~~fvk~--------~---g~~~~g~~Wp-----------G~-~~~-~Dftnp~a~~ww 442 (903)
+. ..+-+.+..+ .++|+-. . -..+.+..|. +. ... +++.||+++++.
T Consensus 103 s~--~~~~f~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~v~~~~ 180 (505)
T COG0366 103 SD--EHPWFKEARSSKPNPKRSDYYIWRDPDPDGTPPNNWFSVFGGDAWTWGNTGEYYLHLFSSEQPDLNWENPEVREEL 180 (505)
T ss_pred CC--ccHHHHHHhcCCCCcccCCCceEccCcccCCCCCcchhhcCCCCCCcCCCCceEEEecCCCCCCcCCCCHHHHHHH
Confidence 21 2233443331 1444411 0 0112222331 11 122 589999999999
Q ss_pred HHHHHHHhccCCCceEEeec
Q 038998 443 ENEIKLFRDILPLDGLWLDM 462 (903)
Q Consensus 443 ~~~~~~~~~~~g~dg~W~Dm 462 (903)
.+.++.+.+ .|+|||=+|-
T Consensus 181 ~~~~~~W~~-~gvDGfRlDa 199 (505)
T COG0366 181 LDVVKFWLD-KGVDGFRLDA 199 (505)
T ss_pred HHHHHHHHH-cCCCeEEecc
Confidence 887877776 8999999985
No 74
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=80.23 E-value=17 Score=44.50 Aligned_cols=129 Identities=15% Similarity=0.180 Sum_probs=75.8
Q ss_pred CHHHHHHHHHHhHhcCCCceEEEE-eccccCCCCccccC-------CCCCChh-HHHHHHHHHHHcCceEEE-EecCCCC
Q 038998 325 NVSDLEAVVAGYAKAVIPLEVMWT-DIDYMDGYKDFTLD-------PINFPAD-QMKKFVDTLHQNGQRYVL-ILDPGIS 394 (903)
Q Consensus 325 ~~~~v~~vv~~~~~~~IP~D~iwl-Didy~~~~~dFt~d-------~~~FP~~-~l~~~v~~L~~~G~k~v~-ivdP~I~ 394 (903)
.-+-+.+.+..+++.|| ..|-+ =+-=....+.|-++ ..+|-.| ++++|||..|++|+-+++ ||--|..
T Consensus 163 ~~e~a~~llpYl~elG~--T~IELMPv~e~p~~~sWGYq~~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~ 240 (628)
T COG0296 163 YFELAIELLPYLKELGI--THIELMPVAEHPGDRSWGYQGTGYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHFP 240 (628)
T ss_pred HHHHHHHHhHHHHHhCC--CEEEEcccccCCCCCCCCCCcceeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCC
Confidence 35667788889999887 33311 00001122333333 2355433 699999999999998887 4444555
Q ss_pred CCCChHH-HHHhHhCCeeeecCCcCeeee--eeCCCccccCCC-ChHHHHHHHHHHHHHhccCCCceEEeecc
Q 038998 395 VNNSYET-YIRGIEADIFIKRDGVPYVGQ--VWEGPLNFPDFV-NPATQTFWENEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 395 ~~~~y~~-y~~g~~~~~fvk~~g~~~~g~--~WpG~~~~~Dft-np~a~~ww~~~~~~~~~~~g~dg~W~Dmn 463 (903)
.+..|-. |+ +.+......|..|. -| ...+++. .+++|.+..+....+++...+||+=+|.-
T Consensus 241 ~d~~~L~~fd-----g~~~~e~~~~~~~~~~~W---g~~i~~~gr~EVR~Fll~nal~Wl~~yHiDGlRvDAV 305 (628)
T COG0296 241 PDGNYLARFD-----GTFLYEHEDPRRGEHTDW---GTAIFNYGRNEVRNFLLANALYWLEEYHIDGLRVDAV 305 (628)
T ss_pred CCcchhhhcC-----CccccccCCcccccCCCc---ccchhccCcHHHHHHHHHHHHHHHHHhCCcceeeehh
Confidence 5443211 11 11221111122221 23 2234444 99999999888888888899999999953
No 75
>COG2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase [Carbohydrate transport and metabolism]
Probab=78.21 E-value=17 Score=39.69 Aligned_cols=107 Identities=18% Similarity=0.308 Sum_probs=64.9
Q ss_pred CCCceEEEEeccccCCCCccccCCCCCChhHHHHHHHHHHHcCceEEEEecCCCCCCCChHHHHHhHhCCeeeecC---C
Q 038998 340 VIPLEVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRD---G 416 (903)
Q Consensus 340 ~IP~D~iwlDidy~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~---g 416 (903)
+-|.|.+.+|-.|.+.. ...++ .+=++.+++.|++.|..++ |...++|..| -++....+.+ |
T Consensus 41 ~~~f~llVVDps~~g~~------~~~~~----~eelr~~~~gg~~pIAYls--Ig~ae~yR~Y---wd~~w~~~~p~wLg 105 (300)
T COG2342 41 NSPFDLLVVDPSYCGPF------NTPWT----IEELRTKADGGVKPIAYLS--IGEAESYRFY---WDKYWLTGRPDWLG 105 (300)
T ss_pred cCCCcEEEEeccccCCC------CCcCc----HHHHHHHhcCCeeEEEEEe--chhhhhhhhH---hhhhhhcCCccccc
Confidence 45889999986644321 12232 4456777888988887776 3344567766 2222222222 2
Q ss_pred cCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeecccc
Q 038998 417 VPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMNEI 465 (903)
Q Consensus 417 ~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~DmnEp 465 (903)
.. -.-|||. ..+-|=.|+=++-+...++++. ..||||.-+|.=++
T Consensus 106 ~e--dP~W~Gn-y~VkYW~~eWkdii~~~l~rL~-d~GfdGvyLD~VD~ 150 (300)
T COG2342 106 EE--DPEWPGN-YAVKYWEPEWKDIIRSYLDRLI-DQGFDGVYLDVVDA 150 (300)
T ss_pred CC--CCCCCCC-ceeeccCHHHHHHHHHHHHHHH-HccCceEEEeeech
Confidence 11 1348886 3445666776666677777776 48999999997554
No 76
>PLN02877 alpha-amylase/limit dextrinase
Probab=69.15 E-value=16 Score=46.80 Aligned_cols=89 Identities=15% Similarity=0.194 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHcCceEEEEe-cCCCCCCCC---hHHHHHhHhCCeeeecC--CcCeeeeeeCCCccccCCCChHHHHHHH
Q 038998 370 QMKKFVDTLHQNGQRYVLIL-DPGISVNNS---YETYIRGIEADIFIKRD--GVPYVGQVWEGPLNFPDFVNPATQTFWE 443 (903)
Q Consensus 370 ~l~~~v~~L~~~G~k~v~iv-dP~I~~~~~---y~~y~~g~~~~~fvk~~--g~~~~g~~WpG~~~~~Dftnp~a~~ww~ 443 (903)
++++||+.||++|+++|+=+ --|...... ...++ ....++|.+.+ |..-...|+. -..-.++.++++..
T Consensus 467 efk~mV~~lH~~GI~VImDVVyNHt~~~g~~~~~s~ld-~~vP~YY~r~~~~G~~~ns~c~n----~~Ase~~mvrklIl 541 (970)
T PLN02877 467 EFRKMVQALNRIGLRVVLDVVYNHLHSSGPFDENSVLD-KIVPGYYLRRNSDGFIENSTCVN----NTASEHYMVDRLIV 541 (970)
T ss_pred HHHHHHHHHHHCCCEEEEEECCccccCCCCcchhhccc-CCCCCceEEECCCCCcccCCccC----CCccCCHHHHHHHH
Confidence 58999999999999998743 334432110 01122 22346666543 3221112221 12346788899999
Q ss_pred HHHHHHhccCCCceEEeecc
Q 038998 444 NEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 444 ~~~~~~~~~~g~dg~W~Dmn 463 (903)
+.++.+...+++|||=+|..
T Consensus 542 Dsl~yW~~ey~VDGFRFDlm 561 (970)
T PLN02877 542 DDLLNWAVNYKVDGFRFDLM 561 (970)
T ss_pred HHHHHHHHHhCCCEEEEEcc
Confidence 99999888899999999964
No 77
>PRK15447 putative protease; Provisional
Probab=67.08 E-value=16 Score=40.74 Aligned_cols=115 Identities=11% Similarity=0.112 Sum_probs=67.3
Q ss_pred HHHHHHHHHhHhcCCCceEEEEeccccCCCCccccCCCCCChhHHHHHHHHHHHcCceEEEEecCCC-CCCCChHHHHHh
Q 038998 327 SDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGI-SVNNSYETYIRG 405 (903)
Q Consensus 327 ~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I-~~~~~y~~y~~g 405 (903)
..++++.....+.| .|+|++..+-...+. +|...++++.++.+|+.|.|+.+. -|.| ..+.....+.+.
T Consensus 15 ~~~~~~~~~~~~~g--aDaVY~g~~~~~~R~-------~f~~~~l~e~v~~~~~~gkkvyva-~p~i~~~~~e~~~l~~~ 84 (301)
T PRK15447 15 ETVRDFYQRAADSP--VDIVYLGETVCSKRR-------ELKVGDWLELAERLAAAGKEVVLS-TLALVEAPSELKELRRL 84 (301)
T ss_pred CCHHHHHHHHHcCC--CCEEEECCccCCCcc-------CCCHHHHHHHHHHHHHcCCEEEEE-ecccccCHHHHHHHHHH
Confidence 44556666776776 799999865544443 354458899999999999997764 4555 334334444444
Q ss_pred HhCC---eeeecCCcCeeeeeeCCCc----cccCCCChHHHHHHHHHHHHHhccCCCceEEe
Q 038998 406 IEAD---IFIKRDGVPYVGQVWEGPL----NFPDFVNPATQTFWENEIKLFRDILPLDGLWL 460 (903)
Q Consensus 406 ~~~~---~fvk~~g~~~~g~~WpG~~----~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~ 460 (903)
++.+ +.+.+.|.....+- .|.. ....-+|..+.++|.+ .|++.+.+
T Consensus 85 l~~~~~~v~v~d~g~l~~~~e-~~~~l~~d~~lni~N~~a~~~l~~--------~G~~rv~l 137 (301)
T PRK15447 85 VENGEFLVEANDLGAVRLLAE-RGLPFVAGPALNCYNAATLALLAR--------LGATRWCM 137 (301)
T ss_pred HhcCCCEEEEeCHHHHHHHHh-cCCCEEEecccccCCHHHHHHHHH--------cCCcEEEE
Confidence 4443 22323232111110 1111 2234589999888864 46666654
No 78
>smart00642 Aamy Alpha-amylase domain.
Probab=57.40 E-value=35 Score=34.58 Aligned_cols=66 Identities=14% Similarity=0.211 Sum_probs=40.9
Q ss_pred CCHHHHHHHHHHhHhcCCCceEEEEeccccCCC---CccccCCC-------CCCh-hHHHHHHHHHHHcCceEEEEecC
Q 038998 324 KNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGY---KDFTLDPI-------NFPA-DQMKKFVDTLHQNGQRYVLILDP 391 (903)
Q Consensus 324 ~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~---~dFt~d~~-------~FP~-~~l~~~v~~L~~~G~k~v~ivdP 391 (903)
.+...+.+-++.+++.|+ ++||+---+.... .++-+++. +|-. .++++|++++|++|+++++=+-|
T Consensus 16 G~~~gi~~~l~yl~~lG~--~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 16 GDLQGIIEKLDYLKDLGV--TAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred cCHHHHHHHHHHHHHCCC--CEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 456777777777777775 8888853222111 12222222 3322 46999999999999998874433
No 79
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=55.97 E-value=34 Score=39.26 Aligned_cols=124 Identities=16% Similarity=0.138 Sum_probs=66.9
Q ss_pred CHHHHHHHHHHhHhcCCCceEE-EEecccc---CCCCccccCCCCCChhHHHHHHHHHHHcCceEEEEecCCCCCCCChH
Q 038998 325 NVSDLEAVVAGYAKAVIPLEVM-WTDIDYM---DGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYE 400 (903)
Q Consensus 325 ~~~~v~~vv~~~~~~~IP~D~i-wlDidy~---~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~~y~ 400 (903)
+.+++++.++.|++.|+-+=.| ...+..+ .+.-||+ .+..+++.++++|+|+++.+..+- .|
T Consensus 8 ~~e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~eG~ydF~---------~lD~~l~~a~~~Gi~viL~~~~~~-----~P 73 (374)
T PF02449_consen 8 PEEEWEEDLRLMKEAGFNTVRIGEFSWSWLEPEEGQYDFS---------WLDRVLDLAAKHGIKVILGTPTAA-----PP 73 (374)
T ss_dssp -CCHHHHHHHHHHHHT-SEEEE-CCEHHHH-SBTTB---H---------HHHHHHHHHHCTT-EEEEEECTTT-----S-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEechhhccCCCCeeecH---------HHHHHHHHHHhccCeEEEEecccc-----cc
Confidence 3578889999999999854443 1222222 2333333 467899999999999998764221 12
Q ss_pred HHHHhHhCCeeeec-CCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHh----ccCCCceEEeecccccc
Q 038998 401 TYIRGIEADIFIKR-DGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFR----DILPLDGLWLDMNEISN 467 (903)
Q Consensus 401 ~y~~g~~~~~fvk~-~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~----~~~g~dg~W~DmnEps~ 467 (903)
..-.-.-.++...+ .|... -.|.....++.+|..++.....++.+. +.-.+-||-+| ||+..
T Consensus 74 ~Wl~~~~Pe~~~~~~~g~~~----~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~-NE~~~ 140 (374)
T PF02449_consen 74 AWLYDKYPEILPVDADGRRR----GFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQID-NEPGY 140 (374)
T ss_dssp HHHHCCSGCCC-B-TTTSBE----ECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEC-CSTTC
T ss_pred cchhhhcccccccCCCCCcC----ccCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEec-cccCc
Confidence 22111111222222 24321 234445568889998887766655443 33346677776 88864
No 80
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B ....
Probab=55.76 E-value=85 Score=35.75 Aligned_cols=120 Identities=18% Similarity=0.215 Sum_probs=64.1
Q ss_pred HHHHHHHHHHhHhcCCCceEEEEeccccCCCCcc-------ccCCCCCChhHHHHHHHHHHHcCceEEEEecCCCCCC-C
Q 038998 326 VSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDF-------TLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVN-N 397 (903)
Q Consensus 326 ~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dF-------t~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~-~ 397 (903)
.-+..+.++.++++|.-.=++.. -+.+++.-| ..-...+...-+++|++..++.|+|+.+...|. .-. .
T Consensus 90 ~fD~dqW~~~ak~aGakY~VlTa--kHHDGF~LW~S~~t~~~v~~~~~krDiv~El~~A~rk~Glk~G~Y~S~~-dw~~~ 166 (346)
T PF01120_consen 90 KFDADQWAKLAKDAGAKYVVLTA--KHHDGFCLWPSKYTDYNVVNSGPKRDIVGELADACRKYGLKFGLYYSPW-DWHHP 166 (346)
T ss_dssp T--HHHHHHHHHHTT-SEEEEEE--E-TT--BSS--TT-SSBGGGGGGTS-HHHHHHHHHHHTT-EEEEEEESS-SCCCT
T ss_pred cCCHHHHHHHHHHcCCCEEEeeh--hhcCccccCCCCCCcccccCCCCCCCHHHHHHHHHHHcCCeEEEEecch-HhcCc
Confidence 34567888889999987766644 344444322 221111222237899999999999999988775 211 1
Q ss_pred ChHHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEeecccc
Q 038998 398 SYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLDMNEI 465 (903)
Q Consensus 398 ~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~DmnEp 465 (903)
.|.....+.... .-+....+.+| ..++|..++++++....+|.+|+|+.-+
T Consensus 167 ~~~~~~~~~~~~-------------~~~~~~~~~~~----~~~~~~~ql~EL~~~Y~~d~lWfDg~~~ 217 (346)
T PF01120_consen 167 DYPPDEEGDENG-------------PADGPGNWQRY----YNEYWLAQLRELLTRYKPDILWFDGGWP 217 (346)
T ss_dssp TTTSSCHCHHCC---------------HCCHHHHHH----HHHHHHHHHHHHHHCSTESEEEEESTTS
T ss_pred ccCCCccCCccc-------------ccccchhhHhH----hhhhhHHHHHHHHhCCCcceEEecCCCC
Confidence 111100000000 00000001111 2348889999999888999999998743
No 81
>cd06416 GH25_Lys1-like Lys-1 is a lysozyme encoded by the Caenorhabditis elegans lys-1 gene. This gene is one of a several lysozyme genes upregulated upon infection by the Gram-negative bacterial pathogen Serratia marcescens. Lys-1 contains a glycosyl hydrolase family 25 (GH25) catalytic domain. This family also includes Lys-5 from Caenorhabditis elegans.
Probab=55.45 E-value=22 Score=36.83 Aligned_cols=74 Identities=9% Similarity=0.122 Sum_probs=49.4
Q ss_pred cceeeeC--CCCHHHHHHHHHHhHhcCCCceEEEEeccccCCCCccccCCCCCChhHHHHHHHHHHHcCceEEEEecCC
Q 038998 316 FHQCRYG--YKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPG 392 (903)
Q Consensus 316 ~~qsr~g--Y~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~ 392 (903)
||-++-. ..-.+++..+++..+..++..+.+|+|++...+ .++.+... -...+++|++.+++.|.+.++...+.
T Consensus 58 Yhf~~~~~~~~~~~Qa~~f~~~~~~~~~~~~~i~lDiE~~~~--~~~~~~~~-~~~~~~~f~~~~~~~G~~~~iYt~~~ 133 (196)
T cd06416 58 YFFPCINCCGSAAGQVQTFLQYLKANGIKYGTVWIDIEQNPC--QWSSDVAS-NCQFLQELVSAAKALGLKVGIYSSQY 133 (196)
T ss_pred EEEecCCCCCCHHHHHHHHHHHHHhCCCceeEEEEEEecCCC--CCcCCHHH-HHHHHHHHHHHHHHhCCeEEEEcCcc
Confidence 6766543 344677888888888877777888999987522 22222211 11246788999999999988877653
No 82
>PF14885 GHL15: Hypothetical glycosyl hydrolase family 15
Probab=53.77 E-value=22 Score=31.65 Aligned_cols=54 Identities=24% Similarity=0.457 Sum_probs=37.4
Q ss_pred CCeeeecC-CcCeeeeeeCCCcc---ccCCCChHHHHHHHHHHHHHhccCCCceEEeecc
Q 038998 408 ADIFIKRD-GVPYVGQVWEGPLN---FPDFVNPATQTFWENEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 408 ~~~fvk~~-g~~~~g~~WpG~~~---~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dmn 463 (903)
.+.|.++. |+. + .-|+|... ..+...|..+.||.+.+.+.+..-++||+..|.+
T Consensus 19 ~~w~a~~~~g~~-i-~~W~~~~~~~~~~~~~~~~~r~~w~~~v~e~~~~s~~DGv~~Dn~ 76 (79)
T PF14885_consen 19 ADWFAKTANGSR-I-SEWPGYPGHYQMYVWSCPDYRRYWVDAVVEELQNSPWDGVFADND 76 (79)
T ss_pred chhhccccCccc-e-eecCCCCceeeeccCCcchHHHHHHHHHHHHHhcCccceeeeecc
Confidence 34555554 433 3 45766432 3567779999999998887665679999999954
No 83
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=37.20 E-value=85 Score=34.61 Aligned_cols=65 Identities=17% Similarity=0.123 Sum_probs=42.5
Q ss_pred CHHHHHHHHHHhHhcCCCceEEEEeccccCCCCccccCC-CCCChhHHHHHHHHHHHcCceEEEEecC
Q 038998 325 NVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDP-INFPADQMKKFVDTLHQNGQRYVLILDP 391 (903)
Q Consensus 325 ~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dFt~d~-~~FP~~~l~~~v~~L~~~G~k~v~ivdP 391 (903)
+.+..++.++-..++||+.=. +|..|-....+-++|. +..|+.+|+++++.-+++|+.+.+|.+-
T Consensus 30 ~t~~~k~yIDfAa~~G~eYvl--vD~GW~~~~~~~~~d~~~~~~~~dl~elv~Ya~~KgVgi~lw~~~ 95 (273)
T PF10566_consen 30 TTETQKRYIDFAAEMGIEYVL--VDAGWYGWEKDDDFDFTKPIPDFDLPELVDYAKEKGVGIWLWYHS 95 (273)
T ss_dssp SHHHHHHHHHHHHHTT-SEEE--EBTTCCGS--TTT--TT-B-TT--HHHHHHHHHHTT-EEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEE--eccccccccccccccccccCCccCHHHHHHHHHHcCCCEEEEEeC
Confidence 778889999999999997544 4888863221112221 2455568999999999999999999863
No 84
>PRK13840 sucrose phosphorylase; Provisional
Probab=37.02 E-value=6.8e+02 Score=30.16 Aligned_cols=32 Identities=16% Similarity=0.115 Sum_probs=27.2
Q ss_pred cCCCChHHHHHHHHHHHHHhccCCCceEEeecc
Q 038998 431 PDFVNPATQTFWENEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 431 ~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~Dmn 463 (903)
++|.||++++...+.++.+.+ .|+|||=+|.-
T Consensus 164 LN~~NP~V~~~i~~il~fwl~-~GVDgfRLDAv 195 (495)
T PRK13840 164 IDVHSAAGWEYLMSILDRFAA-SHVTLIRLDAA 195 (495)
T ss_pred eCCCCHHHHHHHHHHHHHHHH-CCCCEEEEech
Confidence 478899999999988877775 69999999963
No 85
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=36.49 E-value=2.9e+02 Score=30.69 Aligned_cols=123 Identities=14% Similarity=0.218 Sum_probs=73.8
Q ss_pred eeeeCCCCHHHHHHHHHHhHhcCCCceEEEEecc--c---cCCCCccc---------cCCCCCChhHHHHHHHHHHHcCc
Q 038998 318 QCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDID--Y---MDGYKDFT---------LDPINFPADQMKKFVDTLHQNGQ 383 (903)
Q Consensus 318 qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDid--y---~~~~~dFt---------~d~~~FP~~~l~~~v~~L~~~G~ 383 (903)
.+| .|.+.+.++++++.|...++-.=-+++-.| | ...+-..+ -....|...+++++++.-+++|+
T Consensus 8 ~aR-~~~~~~~lk~~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~~~~~~~~~~yT~~di~elv~yA~~rgI 86 (303)
T cd02742 8 VSR-HFLSVESIKRTIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQINPRSPGGFYTYAQLKDIIEYAAARGI 86 (303)
T ss_pred ccc-cCcCHHHHHHHHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhcccccCCCCCCeECHHHHHHHHHHHHHcCC
Confidence 467 888999999999999999886544444422 1 01111111 11224555689999999999999
Q ss_pred eEEEEec-CCCCCCCChHHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhc
Q 038998 384 RYVLILD-PGISVNNSYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRD 451 (903)
Q Consensus 384 k~v~ivd-P~I~~~~~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~ 451 (903)
++|+-|| |+=. ....++.. ++... .+.+..|......+|.++|++.++-.+.++++..
T Consensus 87 ~viPEiD~PGH~-----~a~~~~~p-~l~~~----~~~~~~~~~~~~~l~~~~~~t~~fl~~l~~e~~~ 145 (303)
T cd02742 87 EVIPEIDMPGHS-----TAFVKSFP-KLLTE----CYAGLKLRDVFDPLDPTLPKGYDFLDDLFGEIAE 145 (303)
T ss_pred EEEEeccchHHH-----HHHHHhCH-HhccC----ccccCCCCCCCCccCCCCccHHHHHHHHHHHHHH
Confidence 9997665 2211 11111100 00000 0112233334456899999999999988887764
No 86
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=32.01 E-value=2.7e+02 Score=31.82 Aligned_cols=98 Identities=15% Similarity=0.251 Sum_probs=57.0
Q ss_pred ceEEEEeccccCCCCccccCCCCCChhHHHHHHHHHHHcCceEEEEecCCCCCCCCh---HHHHHhHhCC--eeeecC-C
Q 038998 343 LEVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSY---ETYIRGIEAD--IFIKRD-G 416 (903)
Q Consensus 343 ~D~iwlDidy~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~~y---~~y~~g~~~~--~fvk~~-g 416 (903)
.|++++--. .-+-+.+ ..+|+..++++.++.+|+.|.|+.+.++..+..+.-. ...++..+.+ ..|-.+ |
T Consensus 27 ADaVY~G~~-~~~~R~~---a~nfs~~~l~e~i~~ah~~gkk~~V~~N~~~~~~~~~~~~~~l~~l~e~GvDaviv~Dpg 102 (347)
T COG0826 27 ADAVYIGEK-EFGLRRR---ALNFSVEDLAEAVELAHSAGKKVYVAVNTLLHNDELETLERYLDRLVELGVDAVIVADPG 102 (347)
T ss_pred CCEEEeCCc-ccccccc---cccCCHHHHHHHHHHHHHcCCeEEEEeccccccchhhHHHHHHHHHHHcCCCEEEEcCHH
Confidence 799987533 1111112 1468888999999999999999999988877655321 2233444443 233222 2
Q ss_pred cCe-eeeeeCC----CccccCCCChHHHHHHHH
Q 038998 417 VPY-VGQVWEG----PLNFPDFVNPATQTFWEN 444 (903)
Q Consensus 417 ~~~-~g~~WpG----~~~~~Dftnp~a~~ww~~ 444 (903)
-.. ..+..|. .+..-.-+|+++.+||.+
T Consensus 103 ~i~l~~e~~p~l~ih~S~q~~v~N~~~~~f~~~ 135 (347)
T COG0826 103 LIMLARERGPDLPIHVSTQANVTNAETAKFWKE 135 (347)
T ss_pred HHHHHHHhCCCCcEEEeeeEecCCHHHHHHHHH
Confidence 110 0111111 122345689999999986
No 87
>PRK15063 isocitrate lyase; Provisional
Probab=31.62 E-value=1.1e+02 Score=35.69 Aligned_cols=65 Identities=14% Similarity=0.212 Sum_probs=47.7
Q ss_pred CCCCHHHHHHHHHHhHhcCCCceEEEEeccccCCCCccccCCCCCChhHHHHHHHHHHHcCceEEEEecCCC
Q 038998 322 GYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGI 393 (903)
Q Consensus 322 gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I 393 (903)
+..+.++++++++..+ ..+|.-.+-. ..--.|+|+.. |.+..++.|.++|.++|+++++|--..+
T Consensus 286 ~~~d~ee~~~fa~~v~-~~~P~~~lay-----n~sPsfnW~~~-~~~~~~~~f~~eL~~~Gy~~~~~~la~~ 350 (428)
T PRK15063 286 STPDLEEARRFAEAIH-AKFPGKLLAY-----NCSPSFNWKKN-LDDATIAKFQRELGAMGYKFQFITLAGF 350 (428)
T ss_pred CCCCHHHHHHHHHhhc-ccCccceeec-----CCCCCcccccc-cCHHHHHHHHHHHHHcCceEEEechHHH
Confidence 3568889998888764 3357443321 23347899875 9988899999999999999998865543
No 88
>PF07611 DUF1574: Protein of unknown function (DUF1574); InterPro: IPR011468 This is a family of hypothetical proteins found in Leptospira interrogans and other bacteria.
Probab=31.24 E-value=96 Score=35.36 Aligned_cols=76 Identities=26% Similarity=0.418 Sum_probs=49.1
Q ss_pred CCccccCCCCCChhHHHHHHHHHHHcCceEEEEecCCCCCCCChHHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCC
Q 038998 356 YKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVN 435 (903)
Q Consensus 356 ~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftn 435 (903)
++.|+.++..+. -++++++.++++|+++++|. |-|. ++|.+-.+..-+
T Consensus 241 l~~f~~s~~q~~--F~e~~L~~ake~~I~~vl~~-P~V~-----~~~~~~~~~~~~------------------------ 288 (345)
T PF07611_consen 241 LSSFTFSETQFF--FLEKFLKLAKENGIPVVLWW-PKVS-----PPYEKLYKELKV------------------------ 288 (345)
T ss_pred hcCCCCChhHHH--HHHHHHHHHHHcCCcEEEEE-eccC-----HHHHHHHHhhch------------------------
Confidence 467888888775 46899999999999988764 5443 455544332200
Q ss_pred hHHHHHHHHHHHHHhccCCCceEEeeccccccC
Q 038998 436 PATQTFWENEIKLFRDILPLDGLWLDMNEISNF 468 (903)
Q Consensus 436 p~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~f 468 (903)
-..|| ..++.+.+..++ -++||||...+
T Consensus 289 --~~~w~-~~i~~l~~~~~~--~~~dmn~d~~~ 316 (345)
T PF07611_consen 289 --YESWW-PIIKKLAKEYGI--PFLDMNEDPSY 316 (345)
T ss_pred --hhHHH-HHHHHHHhcCCc--eEecccCCCCc
Confidence 12354 556777665544 47899985433
No 89
>cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=30.07 E-value=8e+02 Score=27.26 Aligned_cols=123 Identities=13% Similarity=0.086 Sum_probs=75.4
Q ss_pred eeeeCCCCHHHHHHHHHHhHhcCCCceEEEEecccc-CCCCccccCCCCCChhHHHHHHHHHHHcCceEEEEecCCCCCC
Q 038998 318 QCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYM-DGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVN 396 (903)
Q Consensus 318 qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~-~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~ 396 (903)
.+|-.+.+.+.++++++.+...++-.=-+++...+- .+.-.+.-++..|...+++++++.-+++|+.+|+-+|- -
T Consensus 8 ~~R~~~~~~~~lk~~id~ma~~k~N~l~lhl~D~f~~~~~p~~~~~~~~yT~~ei~ei~~yA~~~gI~vIPeid~----p 83 (301)
T cd06565 8 LKRNAVPKVSYLKKLLRLLALLGANGLLLYYEDTFPYEGEPEVGRMRGAYTKEEIREIDDYAAELGIEVIPLIQT----L 83 (301)
T ss_pred cCCCCCCCHHHHHHHHHHHHHcCCCEEEEEEecceecCCCcccccCCCCcCHHHHHHHHHHHHHcCCEEEecCCC----H
Confidence 466677889999999999999988543343332211 22222333355677778999999999999999976551 1
Q ss_pred CChHHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCC
Q 038998 397 NSYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILP 454 (903)
Q Consensus 397 ~~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g 454 (903)
+. -...++..-|..- ..++.....+|.++|++.++-.+.++++....+
T Consensus 84 -GH--~~~~l~~~~~~~l-------~~~~~~~~~l~~~~~~t~~fi~~li~ev~~~f~ 131 (301)
T cd06565 84 -GH--LEFILKHPEFRHL-------REVDDPPQTLCPGEPKTYDFIEEMIRQVLELHP 131 (301)
T ss_pred -HH--HHHHHhCcccccc-------cccCCCCCccCCCChhHHHHHHHHHHHHHHhCC
Confidence 10 0001111101100 011222345789999999999999888775433
No 90
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=27.50 E-value=4.5e+02 Score=32.92 Aligned_cols=123 Identities=8% Similarity=0.035 Sum_probs=72.3
Q ss_pred HHHHHHHHHHhHhcCCCceEEEEeccccCCCCccccCCCCCChh-------HHHHHHHH-HHHcCceEEEEecCC-CCCC
Q 038998 326 VSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDPINFPAD-------QMKKFVDT-LHQNGQRYVLILDPG-ISVN 396 (903)
Q Consensus 326 ~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dFt~d~~~FP~~-------~l~~~v~~-L~~~G~k~v~ivdP~-I~~~ 396 (903)
.+++.++++++++.|| .++++-.- .+-.+|=.++..-||+. .+..+.=. -|+.|+|+-.|+.|. ++..
T Consensus 333 ~~~L~~lLdrlk~~G~--ntV~lqaf-adp~gd~~~~s~yfP~~~lp~r~d~f~~~aw~l~~r~~v~v~AWmp~~~~~~~ 409 (671)
T PRK14582 333 DRNIDVLIQRVKDMQI--STVYLQAF-ADPDGDGLVKELYFPNRLLPMRADLFNRVAWQLRTRAGVNVYAWMPVLSFDLD 409 (671)
T ss_pred HHHHHHHHHHHHHcCC--CEEEEEec-cCCCCCccccccccCccccccccCCcCHHHHHHHHhhCCEEEEeccceeeccC
Confidence 4678889999999998 56665430 11112223344444431 11111112 456799999999997 4443
Q ss_pred CChHHHHHhHhCCeeeecCCcC-eeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCCCceEEee
Q 038998 397 NSYETYIRGIEADIFIKRDGVP-YVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILPLDGLWLD 461 (903)
Q Consensus 397 ~~y~~y~~g~~~~~fvk~~g~~-~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g~dg~W~D 461 (903)
...+.-.+ .+ .++.+ -...-|.+. .|-++|++++|-.+-+.++.....|||+-+|
T Consensus 410 ~~~~~~~~---~~----~~~~~~~~~~~~~~r---l~P~~pe~r~~i~~i~~dla~~~~~dGilf~ 465 (671)
T PRK14582 410 PTLPRVKR---LD----TGEGKAQIHPEQYRR---LSPFDDRVRAQVGMLYEDLAGHAAFDGILFH 465 (671)
T ss_pred CCcchhhh---cc----ccCCccccCCCCCcC---CCCCCHHHHHHHHHHHHHHHHhCCCceEEec
Confidence 32221111 11 11111 112234332 7899999999999999998887899999876
No 91
>PTZ00445 p36-lilke protein; Provisional
Probab=26.90 E-value=2e+02 Score=30.68 Aligned_cols=62 Identities=19% Similarity=0.239 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhHhcCCCceEEEEecccc------CCCCccccCCCCC---ChhHHHHHHHHHHHcCceEEEEe
Q 038998 326 VSDLEAVVAGYAKAVIPLEVMWTDIDYM------DGYKDFTLDPINF---PADQMKKFVDTLHQNGQRYVLIL 389 (903)
Q Consensus 326 ~~~v~~vv~~~~~~~IP~D~iwlDidy~------~~~~dFt~d~~~F---P~~~l~~~v~~L~~~G~k~v~iv 389 (903)
.+.....|+.+++.|| -+|-.|.|-+ .||.+.+-|...+ ..|+++.++++|++.|+++++..
T Consensus 28 ~~~~~~~v~~L~~~GI--k~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVT 98 (219)
T PTZ00445 28 HESADKFVDLLNECGI--KVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVT 98 (219)
T ss_pred HHHHHHHHHHHHHcCC--eEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEE
Confidence 4556778999999999 6777887743 3443332111111 23678999999999999988754
No 92
>PRK14511 maltooligosyl trehalose synthase; Provisional
Probab=26.25 E-value=3.2e+02 Score=35.14 Aligned_cols=68 Identities=18% Similarity=0.377 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHhHhcCCCceEEEEecccc------CCC--Ccc-ccCCCCCC-hhHHHHHHHHHHHcCceEEEEecC-CC
Q 038998 325 NVSDLEAVVAGYAKAVIPLEVMWTDIDYM------DGY--KDF-TLDPINFP-ADQMKKFVDTLHQNGQRYVLILDP-GI 393 (903)
Q Consensus 325 ~~~~v~~vv~~~~~~~IP~D~iwlDidy~------~~~--~dF-t~d~~~FP-~~~l~~~v~~L~~~G~k~v~ivdP-~I 393 (903)
+.+++.+.+..+++.|| ++||+--=+. .+| .|| ..|+. |. ..+++.|++.+|++|+++|+=+-| |+
T Consensus 18 tf~~~~~~l~YL~~LGi--s~IyLsPi~~a~~gs~hGYdv~D~~~idp~-lGt~e~f~~Lv~aah~~Gi~VIlDiV~NH~ 94 (879)
T PRK14511 18 TFDDAAELVPYFADLGV--SHLYLSPILAARPGSTHGYDVVDHTRINPE-LGGEEGLRRLAAALRAHGMGLILDIVPNHM 94 (879)
T ss_pred CHHHHHHHhHHHHHcCC--CEEEECcCccCCCCCCCCCCcCCCCCcCCC-CCCHHHHHHHHHHHHHCCCEEEEEeccccc
Confidence 56788899999999887 8888863221 112 122 34432 33 357999999999999999884444 44
Q ss_pred CC
Q 038998 394 SV 395 (903)
Q Consensus 394 ~~ 395 (903)
+.
T Consensus 95 ~~ 96 (879)
T PRK14511 95 AV 96 (879)
T ss_pred cC
Confidence 43
No 93
>TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase. This enzyme, formally named (1-4)-alpha-D-glucan 1-alpha-D-glucosylmutase, is the TreY enzyme of the TreYZ pathway of trehalose biosynthesis, an alternative to the OtsAB pathway. Trehalose may be incorporated into more complex compounds but is best known as compatible solute. It is one of the most effective osmoprotectants, and unlike the various betaines does not require nitrogen for its synthesis.
Probab=25.84 E-value=3.2e+02 Score=34.88 Aligned_cols=80 Identities=11% Similarity=0.263 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHhHhcCCCceEEEEecccc------CCC--Cc-cccCCCCCC-hhHHHHHHHHHHHcCceEEEEecC-CC
Q 038998 325 NVSDLEAVVAGYAKAVIPLEVMWTDIDYM------DGY--KD-FTLDPINFP-ADQMKKFVDTLHQNGQRYVLILDP-GI 393 (903)
Q Consensus 325 ~~~~v~~vv~~~~~~~IP~D~iwlDidy~------~~~--~d-Ft~d~~~FP-~~~l~~~v~~L~~~G~k~v~ivdP-~I 393 (903)
+.+.+.+.+..+++.|| +.||+--=+. .+| .| +..|+ .|- ..+++.|++.+|++|+++|+=+-| |+
T Consensus 14 tf~~~~~~L~YL~~LGv--~~V~lsPi~~a~~gs~hGYdv~D~~~idp-~lGt~edf~~Lv~aah~~Gm~vIlDiVpNH~ 90 (825)
T TIGR02401 14 TFDDAAALLPYLKSLGV--SHLYLSPILTAVPGSTHGYDVVDHSEINP-ELGGEEGLRRLSEAARARGLGLIVDIVPNHM 90 (825)
T ss_pred CHHHHHHhhHHHHHcCC--CEEEeCcCccCCCCCCCCCCCCCCCCcCC-CCCCHHHHHHHHHHHHHCCCEEEEEeccccc
Confidence 67788899999999888 8888863322 112 12 23444 233 357999999999999999884434 45
Q ss_pred CCC-CChHHHHHhHh
Q 038998 394 SVN-NSYETYIRGIE 407 (903)
Q Consensus 394 ~~~-~~y~~y~~g~~ 407 (903)
+.+ ...+-|.+.++
T Consensus 91 a~~~~~n~wf~dvl~ 105 (825)
T TIGR02401 91 AVHLEQNPWWWDVLK 105 (825)
T ss_pred ccccccChHHHHHHH
Confidence 543 12244544443
No 94
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=25.42 E-value=86 Score=35.31 Aligned_cols=68 Identities=13% Similarity=0.139 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhHhcCCCceEEEEeccccCC-CCccccCCCCCChhHHHHHHHHHHHcCceEEEEecCCCCCCC
Q 038998 326 VSDLEAVVAGYAKAVIPLEVMWTDIDYMDG-YKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPGISVNN 397 (903)
Q Consensus 326 ~~~v~~vv~~~~~~~IP~D~iwlDidy~~~-~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~ 397 (903)
.+..+++++++++.|+-+=.+++-+.+.+- .+.|.|... .++..|++..+++|+++++..-|+|..+-
T Consensus 23 ~~~W~~~l~k~ka~G~n~v~~yv~W~~he~~~g~~df~g~----~dl~~f~~~a~~~gl~vilrpGpyi~aE~ 91 (319)
T PF01301_consen 23 PEYWRDRLQKMKAAGLNTVSTYVPWNLHEPEEGQFDFTGN----RDLDRFLDLAQENGLYVILRPGPYICAEW 91 (319)
T ss_dssp GGGHHHHHHHHHHTT-SEEEEE--HHHHSSBTTB---SGG----G-HHHHHHHHHHTT-EEEEEEES---TTB
T ss_pred hhHHHHHHHHHHhCCcceEEEeccccccCCCCCcccccch----hhHHHHHHHHHHcCcEEEecccceecccc
Confidence 566789999999999977777766555432 233333321 36899999999999999999999998763
No 95
>cd06415 GH25_Cpl1-like Cpl-1 lysin (also known as Cpl-9 lysozyme / muramidase) is a bacterial cell wall endolysin encoded by the pneumococcal bacteriophage Cp-1, which cleaves the glycosidic N-acetylmuramoyl-(beta1,4)-N-acetylglucosamine bonds of the pneumococcal glycan chain, thus acting as an enzymatic antimicrobial agent (an enzybiotic) against streptococcal infections. Cpl-1 belongs to the CP family of lysozymes (CPL lysozymes) which includes the Cpl-7 lysin. Cpl-1 has a glycosyl hydrolase family 25 (GH25) catalytic domain with an irregular (beta/alpha)5-beta3 barrel and a C-terminal cell wall-anchoring module formed by six similar choline-binding repeats (ChBr's). The ChBr's facilitate the anchoring of Cpl-1 to the choline-containing teichoic acid of the pneumococcal cell wall. Other members of this domain family have an N-terminal CHAP (cysteine, histidine-dependent amidohydrolases/peptidases) domain similar to that of the firmicute CHAP lysins and associated with endopeptidase
Probab=25.08 E-value=1.1e+02 Score=31.60 Aligned_cols=70 Identities=17% Similarity=0.241 Sum_probs=42.1
Q ss_pred cceeeeCCCC---HHHHHHHHHHhHhcCCCc-eEEEEeccccCCCCccccCCCCCChhHHHHHHHHHHHcCceEEEEecC
Q 038998 316 FHQCRYGYKN---VSDLEAVVAGYAKAVIPL-EVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDP 391 (903)
Q Consensus 316 ~~qsr~gY~~---~~~v~~vv~~~~~~~IP~-D~iwlDidy~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP 391 (903)
||-++..-.. .+|.+-+++..+..++|. ..+++|++.-... +...-. ..++.|++++++.|.+.++...+
T Consensus 57 Yhf~~~~~~~~~a~~eA~~f~~~~~~~~l~~~~~~~lDvE~~~~~-----~~~~~~-~~~~~f~~~v~~~G~~~~iYt~~ 130 (196)
T cd06415 57 YHFARFGGSVSQAKYEADYFLNSAQQAGLPKGSYLALDYEQGSGN-----SKAANT-SAILAFMDTIKDAGYKPMLYSYK 130 (196)
T ss_pred EEEEecCCCHHHHHHHHHHHHHHhhhcCCCCCCEEEEEEecCCCC-----CHHHHH-HHHHHHHHHHHHhCCCcEEEecH
Confidence 6766644221 233444777777778865 5689998854321 111111 13578899999999987765443
No 96
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=23.99 E-value=1.6e+02 Score=32.03 Aligned_cols=79 Identities=22% Similarity=0.420 Sum_probs=57.5
Q ss_pred CcccccceeeeCCCCHHHHHHHHHHhHhc-------CCCceEEEEeccccCCCCccccCCCCCChhHHHHHHHHHHH---
Q 038998 311 YWSFGFHQCRYGYKNVSDLEAVVAGYAKA-------VIPLEVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQ--- 380 (903)
Q Consensus 311 ~WalG~~qsr~gY~~~~~v~~vv~~~~~~-------~IP~D~iwlDidy~~~~~dFt~d~~~FP~~~l~~~v~~L~~--- 380 (903)
.=.|||-.+.|+-++.++|++-+++|..- ++.+|+|++|---- +. ...+ -|+.+.+.+|+
T Consensus 68 v~vlGYV~T~Yg~R~~~~V~~dI~~Y~~W~~~~~~~~~~vdGIFfDE~p~----~~----~~~~--y~~~l~~~vk~~~~ 137 (253)
T PF12138_consen 68 VRVLGYVHTSYGSRPLSEVKADIDTYASWYGQSEDYGYRVDGIFFDEAPN----DY----ANLP--YYQNLYNYVKSAFG 137 (253)
T ss_pred CcEEEEEEccccCCCHHHHHHHHHHHhhccccccCCCcccceEEEecCCC----cH----HHHH--HHHHHHHHHHhccc
Confidence 44689999999999999999999999887 69999999983111 11 2222 46777777777
Q ss_pred cCceEEEEecCCCCCC-CCh
Q 038998 381 NGQRYVLILDPGISVN-NSY 399 (903)
Q Consensus 381 ~G~k~v~ivdP~I~~~-~~y 399 (903)
.+-.-.++.+|+.... +.|
T Consensus 138 ~~~~~~VV~NPGt~~p~~~y 157 (253)
T PF12138_consen 138 LGGDGLVVLNPGTAVPDPGY 157 (253)
T ss_pred cCCCCEEEeCCCCCCCcchh
Confidence 5555667889998553 443
No 97
>smart00632 Aamy_C Aamy_C domain.
Probab=23.83 E-value=3.4e+02 Score=23.78 Aligned_cols=60 Identities=18% Similarity=0.337 Sum_probs=33.0
Q ss_pred eeeecC--cceEeeeecCCceEEEE--EcCCCeeeeecc----Cceeeeec-CCeEEEEeCCCCc-eeEEee
Q 038998 686 QFLIGK--GVIVSPVLRSGAVSVDA--YFPGGNWFDLFN----FSNSVSVS-SGKQITLDAPPDH-INVHVR 747 (903)
Q Consensus 686 Qfm~G~--~LLVaPVl~~g~t~~~v--YlP~G~Wyd~~t----g~~~~~~~-gG~~v~~~apld~-iPvfvR 747 (903)
++.|.+ ..+|+==-.....+..+ -||.|.|.|..+ ++.+. .. +| .+++..|-.. +-+|++
T Consensus 10 ~laF~Rg~~g~VaiN~~~~~~~~~~~t~lp~G~Y~d~l~g~~~g~~v~-V~~~G-~~~~~l~~~~~v~i~~~ 79 (81)
T smart00632 10 QIAFERGSKGFVAINRSDSDLTITLQTSLPAGTYCDVISGLCTGKSVT-VGSNG-IATFTLPAGGAVAIHVD 79 (81)
T ss_pred EEEEECCCeEEEEEECCCCceEEEEeecCCCcceEEEecCcccCCEEE-ECCCC-EEEEEECCCCeEEEEEc
Confidence 666654 45554322223334444 789999999987 33332 23 34 4555555544 555553
No 98
>PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A ....
Probab=22.32 E-value=1.8e+02 Score=33.76 Aligned_cols=91 Identities=18% Similarity=0.330 Sum_probs=55.8
Q ss_pred HHHHHHHHHhHhcCCCceEEEEecccc--CCC--CccccCCCCCChhHHHHHHHHHHHcCceEEEEecCC----------
Q 038998 327 SDLEAVVAGYAKAVIPLEVMWTDIDYM--DGY--KDFTLDPINFPADQMKKFVDTLHQNGQRYVLILDPG---------- 392 (903)
Q Consensus 327 ~~v~~vv~~~~~~~IP~D~iwlDidy~--~~~--~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ivdP~---------- 392 (903)
..++.-++++++.| +|+|-+|+=|- ++. +.|.|. ..+++++-+++.|.|+.+++.=|
T Consensus 16 ~~~~~~L~~LK~~G--V~GVmvdvWWGiVE~~~p~~ydWs-------~Y~~l~~~vr~~GLk~~~vmsfH~cGgNvgD~~ 86 (402)
T PF01373_consen 16 NALEAQLRALKSAG--VDGVMVDVWWGIVEGEGPQQYDWS-------GYRELFEMVRDAGLKLQVVMSFHQCGGNVGDDC 86 (402)
T ss_dssp HHHHHHHHHHHHTT--EEEEEEEEEHHHHTGSSTTB---H-------HHHHHHHHHHHTT-EEEEEEE-S-BSSSTTSSS
T ss_pred HHHHHHHHHHHHcC--CcEEEEEeEeeeeccCCCCccCcH-------HHHHHHHHHHHcCCeEEEEEeeecCCCCCCCcc
Confidence 36777788888877 59999987763 222 333332 56899999999999999988443
Q ss_pred -CCCCCChHHHHHhHhCCeeeecC-C---cCeeeeeeCCCc
Q 038998 393 -ISVNNSYETYIRGIEADIFIKRD-G---VPYVGQVWEGPL 428 (903)
Q Consensus 393 -I~~~~~y~~y~~g~~~~~fvk~~-g---~~~~g~~WpG~~ 428 (903)
|.. + --+.+.+.+.++|.++. | ..++..++.|.+
T Consensus 87 ~IpL-P-~Wv~~~~~~~di~ytd~~G~rn~E~lSp~~~grt 125 (402)
T PF01373_consen 87 NIPL-P-SWVWEIGKKDDIFYTDRSGNRNKEYLSPVLDGRT 125 (402)
T ss_dssp EB-S---HHHHHHHHHSGGEEE-TTS-EEEEEE-CTBTTBC
T ss_pred CCcC-C-HHHHhccccCCcEEECCCCCcCcceeecccCCch
Confidence 221 1 12566677779988765 4 345554444543
No 99
>PF02419 PsbL: PsbL protein; InterPro: IPR003372 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbL found in PSII. PsbL is located in a gene cluster with PsbE, PsbF and PsbJ (PsbEFJL). Both PsbL and PsbJ (IPR002682 from INTERPRO) are essential for proper assembly of the OEC. Mutations in PsbL prevent the formation of both PSII core dimers and PSII-light harvesting complex []. In addition, both PsbL and PsbJ are involved in the unidirectional flow of electrons, where PsbJ regulates the forward electron flow from D2 (Qa) to the plastoquinone pool, and PsbL prevents the reduction of PSII by back electron flow from plastoquinol protecting PSII from photo-inactivation [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_L 3A0B_l 3ARC_l 1S5L_l 2AXT_l 3BZ2_L 4FBY_L 3PRQ_L 3PRR_L 3KZI_L ....
Probab=22.16 E-value=83 Score=23.72 Aligned_cols=16 Identities=44% Similarity=0.667 Sum_probs=12.8
Q ss_pred hHHHHHHHHHHHhhhh
Q 038998 11 QHAIFLLAVHFCYYIL 26 (903)
Q Consensus 11 ~~~~~~~~~~~~~~~~ 26 (903)
...||.++++|+.|++
T Consensus 21 Lllifvl~vLFssyff 36 (37)
T PF02419_consen 21 LLLIFVLAVLFSSYFF 36 (37)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhc
Confidence 3567888999999975
No 100
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B ....
Probab=21.69 E-value=1.4e+02 Score=33.49 Aligned_cols=52 Identities=15% Similarity=0.245 Sum_probs=37.2
Q ss_pred HHHHHHHHHHhHhcCCCceEEEEeccccCCCCccccCCCCCChhHHHHHHHHHHHcCceEEE
Q 038998 326 VSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDFTLDPINFPADQMKKFVDTLHQNGQRYVL 387 (903)
Q Consensus 326 ~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dFt~d~~~FP~~~l~~~v~~L~~~G~k~v~ 387 (903)
.+.+.++++.+++.|+|+|+|=+...+..+. . + ..+.++++++.+.|..+.+
T Consensus 187 ~~~~~~lv~~l~~~gvpIdgIG~Q~H~~~~~-------~--~-~~i~~~l~~~~~~Gl~i~I 238 (320)
T PF00331_consen 187 RDAYLNLVKDLKARGVPIDGIGLQSHFDAGY-------P--P-EQIWNALDRFASLGLPIHI 238 (320)
T ss_dssp HHHHHHHHHHHHHTTHCS-EEEEEEEEETTS-------S--H-HHHHHHHHHHHTTTSEEEE
T ss_pred HHHHHHHHHHHHhCCCccceechhhccCCCC-------C--H-HHHHHHHHHHHHcCCceEE
Confidence 3568899999999999999986543322111 1 3 3689999999999987654
No 101
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=21.03 E-value=2.3e+02 Score=31.84 Aligned_cols=131 Identities=16% Similarity=0.276 Sum_probs=72.0
Q ss_pred eeeeCCCCHHHHHHHHHHhHhcCCCceEEEEecc--c---cCCCCcc----ccCCC----CCChhHHHHHHHHHHHcCce
Q 038998 318 QCRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDID--Y---MDGYKDF----TLDPI----NFPADQMKKFVDTLHQNGQR 384 (903)
Q Consensus 318 qsr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDid--y---~~~~~dF----t~d~~----~FP~~~l~~~v~~L~~~G~k 384 (903)
.+| .|.+.+.++++++.|...++-.=-+++..+ | ...+... .+... .|...+++++++.-+++|++
T Consensus 10 ~aR-~~~~~~~ik~~id~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga~~~~~~~~~yT~~di~~lv~yA~~~gI~ 88 (351)
T PF00728_consen 10 VAR-HFFSVDTIKRLIDQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKGAYRPSDAGGYYTKEDIRELVAYAKERGIE 88 (351)
T ss_dssp TSS-S-B-HHHHHHHHHHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTTTESTTCTESEBEHHHHHHHHHHHHHTT-E
T ss_pred cCC-CCCCHHHHHHHHHHHHHcCCcEEEEEEecCCCCccccCCCccccccCccccccccccCCHHHHHHHHHHHHHcCCc
Confidence 467 788999999999999999886444444333 0 0111110 11111 46656899999999999999
Q ss_pred EEEEec-CCCCCC--CChHHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhccCC
Q 038998 385 YVLILD-PGISVN--NSYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDILP 454 (903)
Q Consensus 385 ~v~ivd-P~I~~~--~~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~g 454 (903)
+|+=|| |+=... ..|+.+. ... ...+.......++.....-.|.++|++.++-.+.++++....+
T Consensus 89 VIPeid~PGH~~~~l~~~p~~~---~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~~~~l~~e~~~~f~ 156 (351)
T PF00728_consen 89 VIPEIDTPGHAEAWLKAYPELG---CSA--WPEDKSWPNSTCWYPDNGVLDPSNPETYEFLKDLLDEVADLFP 156 (351)
T ss_dssp EEEEEEESSS-HHHHHHHHHHC---CCH--TTCSSSCEEEETTSEEEEEE-TTSHHHHHHHHHHHHHHHHHHT
T ss_pred eeeeccCchHHHHHHHhCchhh---ccc--cccccccccccccCCCcccCCCCcHHHHHHHHHHHHHHHhhCC
Confidence 998776 432110 0111111 000 0001111122233333446899999999999998888775444
No 102
>smart00812 Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site PUBMED:. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.
Probab=20.89 E-value=5.9e+02 Score=29.56 Aligned_cols=110 Identities=19% Similarity=0.247 Sum_probs=61.5
Q ss_pred HHHHHHHHhHhcCCCceEEEEeccccCCCCcc-----ccCCCCCC--hhHHHHHHHHHHHcCceEEEEecCCCCC-CCCh
Q 038998 328 DLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDF-----TLDPINFP--ADQMKKFVDTLHQNGQRYVLILDPGISV-NNSY 399 (903)
Q Consensus 328 ~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dF-----t~d~~~FP--~~~l~~~v~~L~~~G~k~v~ivdP~I~~-~~~y 399 (903)
+.++.++.++++|.-.=++.. -+.+++.-| .|+-.+-| ..-++++++..+++|+|+.+...+ +.- ...|
T Consensus 82 D~~~Wa~~~k~AGakY~vlTa--KHHDGF~lw~S~~t~~n~~~~~pkrDiv~el~~A~rk~Glk~G~Y~S~-~DW~~p~y 158 (384)
T smart00812 82 DPEEWADLFKKAGAKYVVLTA--KHHDGFCLWDSKYSNWNAVDTGPKRDLVGELADAVRKRGLKFGLYHSL-FDWFNPLY 158 (384)
T ss_pred CHHHHHHHHHHcCCCeEEeee--eecCCccccCCCCCCCcccCCCCCcchHHHHHHHHHHcCCeEEEEcCH-HHhCCCcc
Confidence 356778888999886655532 333333221 12222222 123789999999999999986543 111 0111
Q ss_pred HHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHH---HHHHHHHHhccCCCceEEeecc
Q 038998 400 ETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTF---WENEIKLFRDILPLDGLWLDMN 463 (903)
Q Consensus 400 ~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~w---w~~~~~~~~~~~g~dg~W~Dmn 463 (903)
... ..... .....|.-.++ |..|+++++...|-|.+|+|+.
T Consensus 159 ~~~----------~~~~~-------------~~~~~~~~~~y~~~~~~Ql~ELit~Ygpd~lWfD~~ 202 (384)
T smart00812 159 AGP----------TSSDE-------------DPDNWPRFQEFVDDWLPQLRELVTRYKPDLLWFDGG 202 (384)
T ss_pred ccc----------ccccc-------------ccccchhHHHHHHHHHHHHHHHHhcCCCceEEEeCC
Confidence 100 00000 00112233344 4889999998888899999975
No 103
>cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins. The endo-beta-N-acetylglucosaminidases have a glycosyl hydrolase family 18 (GH18) catalytic domain. Some members also have an additional C-terminal glycosyl hydrolase family 20 (GH20) domain while others have an N-terminal domain of unknown function (pfam08522). Members of this family include endo-beta-N-acetylglucosaminidase S (EndoS) from Streptococcus pyogenes, EndoF1, EndoF2, EndoF3, and EndoH from Flavobacterium meningosepticum, and EndoE from Enterococcus faecalis. EndoS is a secreted endoglycosidase from Streptococcus pyogenes that specifically hydrolyzes the glycan on human IgG between two core N-acetylglucosamine residues. EndoE is a secreted endoglycosidase, encoded by the ndoE gene in Enterococcus faecalis, that hydrolyzes the glycan on human RNase B.
Probab=20.87 E-value=2.8e+02 Score=29.76 Aligned_cols=68 Identities=19% Similarity=0.244 Sum_probs=44.3
Q ss_pred CChhHHHHHHHHHHHcCceEEEEecCCCCCCCChHHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHH
Q 038998 366 FPADQMKKFVDTLHQNGQRYVLILDPGISVNNSYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENE 445 (903)
Q Consensus 366 FP~~~l~~~v~~L~~~G~k~v~ivdP~I~~~~~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~ 445 (903)
|.....++.++.||++|.|+++.+.-.-. +.. +--..+++.++=|.+.
T Consensus 48 ~~~~~~~~~i~~l~~kG~KVl~sigg~~~---------------------~~~-----------~~~~~~~~~~~~fa~~ 95 (255)
T cd06542 48 FLLTNKETYIRPLQAKGTKVLLSILGNHL---------------------GAG-----------FANNLSDAAAKAYAKA 95 (255)
T ss_pred hhhHHHHHHHHHHhhCCCEEEEEECCCCC---------------------CCC-----------ccccCCHHHHHHHHHH
Confidence 33345678899999999999987642110 000 0012345666666777
Q ss_pred HHHHhccCCCceEEeecccc
Q 038998 446 IKLFRDILPLDGLWLDMNEI 465 (903)
Q Consensus 446 ~~~~~~~~g~dg~W~DmnEp 465 (903)
+..+.+..|+||+=+|...|
T Consensus 96 l~~~v~~yglDGiDiD~E~~ 115 (255)
T cd06542 96 IVDTVDKYGLDGVDFDDEYS 115 (255)
T ss_pred HHHHHHHhCCCceEEeeeec
Confidence 77777789999999997433
No 104
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=20.17 E-value=1.1e+03 Score=26.33 Aligned_cols=120 Identities=15% Similarity=0.207 Sum_probs=68.6
Q ss_pred eeeCCCCHHHHHHHHHHhHhcCCCceEEEEeccccCCCCcc-----------------------ccCCCCCChhHHHHHH
Q 038998 319 CRYGYKNVSDLEAVVAGYAKAVIPLEVMWTDIDYMDGYKDF-----------------------TLDPINFPADQMKKFV 375 (903)
Q Consensus 319 sr~gY~~~~~v~~vv~~~~~~~IP~D~iwlDidy~~~~~dF-----------------------t~d~~~FP~~~l~~~v 375 (903)
+| .|.+.+.++++++.|...++-.=-+++-..|--.-..+ .-....|...++++++
T Consensus 10 aR-~~~~~~~ik~~id~ma~~K~N~lhlHltD~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv 88 (326)
T cd06564 10 GR-KYYSMDFLKDIIKTMSWYKMNDLQLHLNDNLIFNLDDMSTTVNNATYASDDVKSGNNYYNLTANDGYYTKEEFKELI 88 (326)
T ss_pred cC-CCCCHHHHHHHHHHHHHcCCceEEEeecCCcccccCCCchhhhhhhhhccccccccccCCCCCCCCcccHHHHHHHH
Confidence 44 34579999999999999887543333322221000000 1123356667899999
Q ss_pred HHHHHcCceEEEEec-CCCCCCCChHHHHHhHhCCeeeecCCcCeeeeeeCCCccccCCCChHHHHHHHHHHHHHhcc
Q 038998 376 DTLHQNGQRYVLILD-PGISVNNSYETYIRGIEADIFIKRDGVPYVGQVWEGPLNFPDFVNPATQTFWENEIKLFRDI 452 (903)
Q Consensus 376 ~~L~~~G~k~v~ivd-P~I~~~~~y~~y~~g~~~~~fvk~~g~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~ 452 (903)
+.-+++|+++|+=|| |+=. ....++.. .+-+.. + ..| +....+|.++|++.++-.+.++++.+.
T Consensus 89 ~yA~~rgI~vIPEID~PGH~-----~a~~~~~p-el~~~~---~---~~~-~~~~~l~~~~~~t~~f~~~l~~E~~~~ 153 (326)
T cd06564 89 AYAKDRGVNIIPEIDSPGHS-----LAFTKAMP-ELGLKN---P---FSK-YDKDTLDISNPEAVKFVKALFDEYLDG 153 (326)
T ss_pred HHHHHcCCeEeccCCCcHHH-----HHHHHhhH-HhcCCC---c---ccC-CCcccccCCCHHHHHHHHHHHHHHHHh
Confidence 999999999986555 2211 11111100 000000 0 112 233457999999999999888887653
Done!