BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 038999
(360 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 347 bits (891), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 196/318 (61%), Positives = 232/318 (72%), Gaps = 31/318 (9%)
Query: 33 GNKISPAILFIIVILAVVFFISGVLQLLIRFVIRRRSS---SSVSESNRFPEMSGSDAFQ 89
N+ISP ILFIIV+L+V+FFI +L LL+R+ ++++ S SS +ESN+ PE S SD +Q
Sbjct: 46 NNRISPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQ 105
Query: 90 RQLQQLFHLHDSGLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLPMCSH 149
RQLQQLFHLHDSGLDQA IDALPVFLY+EI G KEPFDCAVCLCEFSE DKLRLLP CSH
Sbjct: 106 RQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSH 165
Query: 150 AFHIDCIDTWLLSNSTCPLCRGNLYIHGLGYENPVFEYEYPREDDGFPVSANGGIGASLG 209
AFHIDCIDTWLLSNSTCPLCRG L+ G +E P F + + GG+ S
Sbjct: 166 AFHIDCIDTWLLSNSTCPLCRGTLFSLGHQFEYPDFNFGFFAG-----DDGGGGVRVSPV 220
Query: 210 LKPAENDIRSEKRVFSVRLGKFRSSN--DGSEGIERVEGETSCSNLEARRCYSMGSYQYV 267
KPAEN+I KRVFSVRLGKFRSSN + E + GETS S+L+ RRC+SMGSYQY+
Sbjct: 221 QKPAENEI--GKRVFSVRLGKFRSSNIVNNGEVVVGGGGETSSSSLDNRRCFSMGSYQYI 278
Query: 268 VADSELQVALCPRRGGSASVRFGKGRSAQNDNSSNDGDVEGKKINFRSKGESFSVSKIWQ 327
VA+S+L VALCP N+ N+ DVEGKKIN RSKGESFSVSKIWQ
Sbjct: 279 VAESDLVVALCP----------------NNEGLKNNKDVEGKKINMRSKGESFSVSKIWQ 322
Query: 328 WS-KKSKFPSS--SETHM 342
WS K+SKFP++ SET++
Sbjct: 323 WSNKRSKFPNNHPSETNL 340
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 346 bits (888), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 191/336 (56%), Positives = 238/336 (70%), Gaps = 27/336 (8%)
Query: 33 GNKISPAILFIIVILAVVFFISGVLQLLIRFVIRRRSSSSVSESNRFPEMSGSDAFQRQL 92
GN+ISPA+LF+IVILAV+FFISG+L LL+RF+I+ S+++ S SNRFPE+S SDA QRQL
Sbjct: 38 GNRISPAVLFVIVILAVLFFISGLLHLLVRFLIKHPSATASSRSNRFPEISTSDALQRQL 97
Query: 93 QQLFHLHDSGLDQAFIDALPVFLYREIM----------GLKEPFDCAVCLCEFSEQDKLR 142
QQLFHL+DSGLDQAFIDALPVF Y+EI+ +EPFDCAVCLCEFSE+DKLR
Sbjct: 98 QQLFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLR 157
Query: 143 LLPMCSHAFHIDCIDTWLLSNSTCPLCRGNLYIHGLGYENPVFEYEYPREDDGFPVSANG 202
LLPMCSHAFH++CIDTWL SNSTCPLCRG L+ G ENP+F+++ RED+
Sbjct: 158 LLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMFDFDDIREDE-------E 210
Query: 203 GIGASLGLKPAE-NDIRSEKRVFSVRLGKF-RSSNDGS-EGIERVE-GETSCSNLEARRC 258
G+ + K E +I EK V VRLGKF R N G+ +G + V GETS SNL+ARRC
Sbjct: 211 GVTENGSQKTMEIQEIVVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRC 270
Query: 259 YSMGSYQYVVADSELQVALCPRRGGSASVRFGKGRSAQNDNSSNDGDVEGKKINFRSKGE 318
+SMGSYQY++ +SEL+V R ++ S Q NSS++ + KKIN +KGE
Sbjct: 271 FSMGSYQYILGNSELKVPFANDR--LPRLKPQDKESEQTGNSSSE---DNKKINTVAKGE 325
Query: 319 SFSVSKIWQWSKKSKFPSSSETHMGSSSGTV-GLPR 353
SFSVSKIW W KK KF S ++ + SSS V LP+
Sbjct: 326 SFSVSKIWLWPKKDKFSSDAQRRLPSSSLNVDDLPK 361
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 197 bits (501), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 125/285 (43%), Positives = 163/285 (57%), Gaps = 36/285 (12%)
Query: 7 HSLLASAPSSSSSLPYNSDYQKESSSGNKISPAILFIIVILAVVFFISGVLQLLIRFVIR 66
H A +P SSS+ QK+ SS + +S + +I LA++ GVL L+ +F+ +
Sbjct: 88 HETEALSPKSSSAATLTLMNQKDPSSSSIVS-VLCLVISGLALIIVFLGVLYLIFKFLRK 146
Query: 67 RRSSSSVSESNRFPEMSGSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLYREI-MGLKEP 125
+ + N P++ + QLQ LF LHDSGLDQ IDALPVFLY + + L++P
Sbjct: 147 SSTLFPIPHFNYNPDLFSFSS--PQLQHLFFLHDSGLDQTAIDALPVFLYGNVTISLEQP 204
Query: 126 FDCAVCLCEFSEQDKLRLLPMCSHAFHIDCIDTWLLSNSTCPLCRGNL------YIHGLG 179
FDCAVCL EFS+ DKLRLLP+CSHAFH+ CIDTWLLSNSTCPLCR +L Y H
Sbjct: 205 FDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTSNVCYNHSET 264
Query: 180 YENPVFEYEYPREDDGFPVSANGGIGASLGLKPAENDIRSEKRVFSVRLGKFRSSNDGSE 239
P+ ++ + DDG ASL KRVFSVRLG+F+S+N+
Sbjct: 265 LVAPLSGHQ--QVDDG---------KASLA-----------KRVFSVRLGRFKSTNESQS 302
Query: 240 GIERVEGETSCSNLEARRCYSMGSYQYVVADSELQVAL--CPRRG 282
V+ E RRCYSMG+ QY+V D + VAL PR G
Sbjct: 303 QRHDVKDEIGVR--MPRRCYSMGTQQYLVCDQDFVVALSSSPREG 345
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/330 (41%), Positives = 194/330 (58%), Gaps = 35/330 (10%)
Query: 30 SSSGNKISPAILFIIVILAVVFFISGVLQLLIRFVIRRRSSSSVSESNRFPEMSGSDAFQ 89
S+ +KI+P IL II+IL+++FFISG+L +L++F++ + S S + F ++ A Q
Sbjct: 33 SNLNSKITPNILLIIIILSIIFFISGLLHILVKFLL---TPSRESREDYFDNVT---ALQ 86
Query: 90 RQLQQLFHLHDSGLDQAFIDALPVFLYREIMGLK-EPFDCAVCLCEFSEQDKLRLLPMCS 148
QLQQLF+LHDSG+DQ+ ID LPVF Y+ I+GLK PFDC VCLCEF +DKLRLLP CS
Sbjct: 87 GQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCS 146
Query: 149 HAFHIDCIDTWLLSNSTCPLCRGNLYIHGLGYEN------PVFEYEYPREDDGFPVSANG 202
HAFH++CIDTWLLS+STCPLCR NL + N V E E D + +N
Sbjct: 147 HAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLSSSYLLVLESEQSSRDMVPVLESNS 206
Query: 203 GIGASLGLKPAENDIRS---------------EKRV-FSVRLGKFRSSNDGSEGIERVEG 246
+G + IRS EK V V+LGKFR+ + EG ++ +
Sbjct: 207 QLGYDVNNDSESTRIRSGRKSCDPDGDMDGLDEKVVPLEVKLGKFRNIDHVGEGSDQKKN 266
Query: 247 ETS--CSNLEARRCYSMGSYQYVV-ADSELQVALCPRRGGSASVRFGKGRSAQNDNSSND 303
S N++ RRC SMGSY+Y++ ++ L+V + ++ S R R+ ++ D
Sbjct: 267 SISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVSTKK-LSGKDRVPSHRTVMSE-CGFD 324
Query: 304 GDVEGKKINFRSKGESFSVSKIWQWSKKSK 333
V+G + + + ESFS+SKIW KK K
Sbjct: 325 PTVKGIEKSVVER-ESFSLSKIWLRGKKEK 353
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 188 bits (477), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/300 (42%), Positives = 166/300 (55%), Gaps = 56/300 (18%)
Query: 87 AFQRQLQQLFHLHDSGLDQAFIDALPVFLYREIMGLKE-PFDCAVCLCEFSEQDKLRLLP 145
A Q QLQQLFHLHDSG+DQ+FID LPVF Y+ I+GLK PFDCAVCLCEF +DKLRLLP
Sbjct: 92 ALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLP 151
Query: 146 MCSHAFHIDCIDTWLLSNSTCPLCRGNLYIHGLGYENPVFEYEYPRE------------- 192
CSHAFH+DCIDTWLLS+STCPLCR +L +++P + E
Sbjct: 152 KCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGGD 211
Query: 193 -DDGFPVSANGGI---GASLGLKPAENDIRSEK-------------------RV--FSVR 227
D V+AN I A LGL ND+ S + +V FSV+
Sbjct: 212 RDSAACVAANDDIDVSSAHLGL-VGNNDLGSTRIDSGHGDQYLDGELGGSVGKVVPFSVK 270
Query: 228 LGKFRSSNDGSEGIERVEGETSCSNLEARRCYSMGSYQYVV-ADSELQVALCPRRGGSAS 286
LGKFR+ + G EG + S+L+ RRC+SMGSY+Y++ ++ L+V + ++ S +
Sbjct: 271 LGKFRNIDIG-EGTSSNNNIGNSSSLDERRCFSMGSYEYIMDEETTLKVHVSTKKQSSKN 329
Query: 287 VRFGKGRSAQND---------NSSNDGDV----EGKKINFRSKGESFSVSKIWQWSKKSK 333
R+A ++ S G + E + N + ESFSVSKIW KK K
Sbjct: 330 RGLPGHRTAMSECGFDPTGRLKFSGSGSMRIVEEAAEKNVVER-ESFSVSKIWLRGKKEK 388
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 101/143 (70%), Gaps = 14/143 (9%)
Query: 36 ISPAILFIIVILAVVFFISGVLQLLIRFVIRRRSS-----SSVSESNRFPEMSGSDAFQR 90
ISP +L I +L+++FF++ ++ LL++F+ R ++ ++ES S A Q
Sbjct: 32 ISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDDAYDGITES--------STALQG 83
Query: 91 QLQQLFHLHDSGLDQAFIDALPVFLYREIMGLKEPF-DCAVCLCEFSEQDKLRLLPMCSH 149
+ Q F+LHD+ +DQ+FIDALP+ Y+ ++GL+ DCAVCL EF+ +D+LRLLP CSH
Sbjct: 84 RYQTRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSH 143
Query: 150 AFHIDCIDTWLLSNSTCPLCRGN 172
AFH++CIDTWLL+NSTCPLCR N
Sbjct: 144 AFHVECIDTWLLTNSTCPLCRDN 166
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 108/212 (50%), Gaps = 30/212 (14%)
Query: 37 SPAILFIIVILAVVFFISGVLQLLIRFVIRRRSSSSVSESNRFPEMSGSDAFQRQLQQLF 96
+P+ + +L +FF++G+L + IR R S+ S R+ +D R+
Sbjct: 43 TPSKTTVFAVLVTLFFLTGLLSVYIRHCAR----SNPDSSTRYFRNRANDGSSRR----- 93
Query: 97 HLHDSGLDQAFIDALPVFLYREI----MGLKEPFDCAVCLCEFSEQDKLRLLPMCSHAFH 152
GLD A +++ PVF Y + +G K+ +CA+CL E + + +RLLP+C+H FH
Sbjct: 94 ----GGLDNAVVESFPVFAYSSVKESKIGSKD-LECAICLNELEDHETVRLLPICNHLFH 148
Query: 153 IDCIDTWLLSNSTCPLCRGNLYIHGLGYENPVFEYEYP-REDDGFPVSANGGIGASLGLK 211
IDCIDTWL S++TCP+CR NL + P EDDG P++A + ++
Sbjct: 149 IDCIDTWLYSHATCPVCRSNL----------TAKSNKPGDEDDGVPLAAMRD-HVVVDIE 197
Query: 212 PAENDIRSEKRVFSVRLGKFRSSNDGSEGIER 243
E +R+ S GKF SN ++R
Sbjct: 198 TVEVAKSHHRRLSSEISGKFPRSNSTGHSMDR 229
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 11/148 (7%)
Query: 38 PAILFIIVILAVVFFISGVLQLLIRFVIRRRSSSSVSESNRFPEMSGSDAFQRQLQQLFH 97
P ++ I V+ V+FF ++ + RRS++ S S+ F + +DA + Q+ ++
Sbjct: 50 PVVVVITVLFLVIFF------MVFGSIFCRRSNAQFSRSSIF-RSTDADA-ESQVVRIRR 101
Query: 98 LHDSGLDQAFIDALPVFLYREIMGL---KEPFDCAVCLCEFSEQDKLRLLPMCSHAFHID 154
L GLD I+ P FLY E+ + K +CAVCLCEF + + LRL+P C H FH D
Sbjct: 102 LTARGLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHAD 161
Query: 155 CIDTWLLSNSTCPLCRGNLYIHGLGYEN 182
C+D WL +STCPLCR +L ++ G ++
Sbjct: 162 CVDVWLSEHSTCPLCRADLVLNQQGDDD 189
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 11/145 (7%)
Query: 38 PAILFIIVILAVVFFISGVLQLLIRFVIRRRSSSSVSESNRFPEMSGSDAFQRQL----- 92
P ++ +I ILA F + L+ ++ RRR +SS + + +S +Q
Sbjct: 58 PLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNN 117
Query: 93 ------QQLFHLHDSGLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLPM 146
Q + GLD++ I ++ V+ YR++ G E DC+VCL EF E + LRLLP
Sbjct: 118 GATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPK 177
Query: 147 CSHAFHIDCIDTWLLSNSTCPLCRG 171
C+HAFH+ CIDTWL S+S CPLCR
Sbjct: 178 CNHAFHVPCIDTWLKSHSNCPLCRA 202
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 104/200 (52%), Gaps = 16/200 (8%)
Query: 36 ISPAILFIIVILAVVFFISGVLQLLIRFVIRRRSSSSVSESNRFPEMSGSDAFQRQLQQL 95
+ P I +I +L F ++ +L L ++ RR S V+ RF + +
Sbjct: 54 LMPGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGGGVV 113
Query: 96 FHLHDSGLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLPMCSHAFHIDC 155
+SG+D++ I++LPVF + + G K+ +CAVCL F + LRLLP C HAFH++C
Sbjct: 114 GGRKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVEC 173
Query: 156 IDTWLLSNSTCPLCRGNL---YIHGLGYENPVFEYEYPREDDG------------FPVSA 200
+DTWL ++STCPLCR + I +G N FE ++ +++ PVS
Sbjct: 174 VDTWLDAHSTCPLCRYRVDPEDILLIGDCNSWFELQFSKDESNSVNNNPPGLTRFIPVSR 233
Query: 201 NGGIGASLGLKPAE-NDIRS 219
G +S G + + N+IR+
Sbjct: 234 ISGRHSSAGERASRLNEIRT 253
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 87/177 (49%), Gaps = 10/177 (5%)
Query: 29 ESSSGNKISPAILFIIVILAVVFFISGVLQLLIRFV-----IRRRSSSSVSESNRFPEMS 83
+ SSG SP ++ II +LA F + + ++ +R R S S + +
Sbjct: 48 DDSSGPVFSPLVIAIIGVLASAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGA 107
Query: 84 GSDAFQRQLQQLFHLH-----DSGLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQ 138
GS Q H SGLD+ I+ + V YR G DC+VCL EFS+
Sbjct: 108 GSGGRHGHGQSRSHESWNVSPPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDG 167
Query: 139 DKLRLLPMCSHAFHIDCIDTWLLSNSTCPLCRGNLYIHGLGYENPVFEYEYPREDDG 195
+ LRLLP CSHAFH CIDTWL S+S CPLCR N+ +G +P E P E G
Sbjct: 168 ESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVTVGLASPEPEGCAPGETGG 224
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 100/203 (49%), Gaps = 29/203 (14%)
Query: 38 PAILFIIVILAVVFFISGVLQLLIRFVIRRRSSSSVSESNRFPEMSGSDAFQRQLQQLFH 97
P++ I + ++VF ++ VL + + S + S+ R R Q LF+
Sbjct: 39 PSLAIITGVFSIVFTLTFVLLVYAKCFHNDLRSETDSDGERIRH-------DRLWQGLFN 91
Query: 98 LHD--SGLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLPMCSHAFHIDC 155
SGLD+ I++LP F + + GLK+ +C+VCL +F + + LRLLP C HAFHI C
Sbjct: 92 RSSRFSGLDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGC 151
Query: 156 IDTWLLSNSTCPLCRGNLYIHGLGYENPVFEYEYPREDDGFPVSANGGIGASLGLKPAEN 215
ID WL ++TCPLCR + I EDD +S G SL + ++
Sbjct: 152 IDQWLEQHATCPLCRNRVNI----------------EDD---LSVLGNSSTSLRI-LNQS 191
Query: 216 DIRSEKRVFSVRLGKFRSSNDGS 238
+ R E + + + +NDGS
Sbjct: 192 ETREEDSRLEIYIEREEGTNDGS 214
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 76/153 (49%), Gaps = 16/153 (10%)
Query: 24 SDYQKESSSGNKISPAILFIIVILAVVFFISGVLQLLIRFVIRRRSSSSVSESNRFPEMS 83
SD +SS + P + ++++L VFF G + IR + R N +
Sbjct: 50 SDVSGDSS---RFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPN---DAG 103
Query: 84 GSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLYREIMGL---KEPFDCAVCLCEFSEQDK 140
A RQ + GLD + I+ P F Y + L KE +C+VCL EF + +
Sbjct: 104 NWLATNRQQAR-------GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDET 156
Query: 141 LRLLPMCSHAFHIDCIDTWLLSNSTCPLCRGNL 173
LRL+P C H FH CID WL S++TCPLCR +L
Sbjct: 157 LRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADL 189
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 39 AILFIIVILAVVFFISGVLQLLIRFV---IRRRSSSSVSESNRFPEMSGSDAFQRQLQ-- 93
AI I + AV+ + L+ +F + R + + N + + FQ + Q
Sbjct: 82 AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVD 141
Query: 94 -QLFHLHDSGLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLPMCSHAFH 152
++ + +GL Q+ I+++ + Y+ GL E DC VCL EF E + LRLLP C+HAFH
Sbjct: 142 HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFH 201
Query: 153 IDCIDTWLLSNSTCPLCRGNLYIHGLG---YENPVFEYE----YPREDDGFPVSANGGIG 205
I CIDTWL S++ CPLCR + + + Y PV E+DG +G I
Sbjct: 202 ISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGSHLENDGVDEEDHGEIE 261
Query: 206 ASLGLKPAENDIRSEKRVFSVRLGKFRSSNDGSE 239
+ E+D S+ R + + +F S DGSE
Sbjct: 262 NRVDSDFKESD-DSDIR---IEIYRFDSDGDGSE 291
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 5/101 (4%)
Query: 93 QQLFHLH-DSGLDQAFIDALPVFLYREIMGLK---EPFDCAVCLCEFSEQDKLRLLPMCS 148
Q++FH GL++ +++ P+FLY E+ GLK +CA+CL EF +++ LR +P CS
Sbjct: 84 QEVFHSRARRGLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCS 143
Query: 149 HAFHIDCIDTWLLSNSTCPLCRGNLYIH-GLGYENPVFEYE 188
H FH +CID WL S STCP CR NL + G Y P+ + E
Sbjct: 144 HTFHANCIDVWLSSQSTCPACRANLSLKPGESYPYPITDLE 184
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 78/165 (47%), Gaps = 22/165 (13%)
Query: 13 APSSSSSLPYNSDYQKESSSGNKISPAILFIIVILAVVFFISGVLQLLIRFVIRRRSSSS 72
A S S P N Y ++SPA+ I+VIL F G + R
Sbjct: 27 AASQSQPGPTNQPYNY-----GRLSPAMAVIVVILIAALFFMGFFSIYFR---------- 71
Query: 73 VSESNRFPEMSGSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLYREI----MGLKEPFDC 128
+ P+ S A + + + GLD + ++ P FLY ++ +G E +C
Sbjct: 72 --HCSGVPDAGVSPAGGARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGE-LEC 128
Query: 129 AVCLCEFSEQDKLRLLPMCSHAFHIDCIDTWLLSNSTCPLCRGNL 173
A+CL EF + + LRLLP C H FH CID WL ++ TCP+CR NL
Sbjct: 129 AICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANL 173
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 80/154 (51%), Gaps = 24/154 (15%)
Query: 27 QKESSSGNKISPAILF---IIVILAVVFFIS-GVLQLLIRFVIRRRSSSSVSESNRFPEM 82
Q+ES N I L II I+ + FIS G++ + + R +
Sbjct: 32 QQESVPTNSIRQTNLSADSIIAIVVLAIFISLGMVSCCLHCIFYREEIGA---------- 81
Query: 83 SGSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLYREIMGLK---EPFDCAVCLCEFSEQD 139
+G D + ++ GL++ I++ P FLY E+ GLK +CA+CL EF +Q+
Sbjct: 82 AGQDVLHSRARR-------GLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQE 134
Query: 140 KLRLLPMCSHAFHIDCIDTWLLSNSTCPLCRGNL 173
LR +P CSH FH +CID WL S STCP+CR NL
Sbjct: 135 TLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANL 168
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Query: 102 GLDQAFIDALPVFLYREIMGLK---EPFDCAVCLCEFSEQDKLRLLPMCSHAFHIDCIDT 158
G+D+ I++ P FLY E+ K +CA+CLCEF +++ LR +P CSH FH +CID
Sbjct: 91 GIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDE 150
Query: 159 WLLSNSTCPLCRGNLYIH-GLGYENPVFEYE 188
WL S STCP+CR NL + G + +P + E
Sbjct: 151 WLSSRSTCPVCRANLSLKSGDSFPHPSMDVE 181
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 35 KISPAILFIIVILAVVFFISGVLQLLIRFVIRRRSSSSVSESNRFPEMSGSDAFQRQLQQ 94
K S L +I I+ FI G+ + R+ R+ S N F + SD R
Sbjct: 9 KASDLTLLVITIILFAIFIVGLASVCFRWTSRQFYSQE--SINPF---TDSDVESRTSIT 63
Query: 95 LFHLHDSGLDQAFIDALPVFLYREI----MGLKEPFDCAVCLCEFSEQDKLRLLPMCSHA 150
GLD+A I++ P FLY E+ +G+ +CAVC+CEF + + LRL+P C H
Sbjct: 64 AVR----GLDEAIINSFPTFLYSEVKERRIGIG-GVECAVCICEFEDHETLRLMPECCHV 118
Query: 151 FHIDCIDTWLLSNSTCPLCRGNLYIH--GLGYENP 183
FH DC+ WL +STCPLCR +L + Y NP
Sbjct: 119 FHADCVSVWLSDHSTCPLCRVDLCLQPGERSYLNP 153
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 83/174 (47%), Gaps = 39/174 (22%)
Query: 106 AFIDALPVFLYREIMGLKEPF---DCAVCLCEFSEQDKLRLLPMCSHAFHIDCIDTWLLS 162
+ +D+LP+F + + DCAVCL +F +D+LRLLP+C HAFH DCID WL+S
Sbjct: 92 SVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVS 151
Query: 163 NSTCPLCRGNLYIHGLGYENPVFEYEYPREDDGFPVSANGGIGASLGLKPAENDIRSEKR 222
N TCPLCR +P+F E V +N G G EN R E
Sbjct: 152 NQTCPLCR-----------SPLFASESDLMKSLAVVGSNNGGG--------ENSFRLE-- 190
Query: 223 VFSVRLGKFRSSNDGSEGIERVEGETSCSNLEARRCYSMGSYQYVVADSELQVA 276
+G I R ++E R YS+GS+ Y+V D + +++
Sbjct: 191 -----IGS----------ISRRRQTPIPESVEQHRTYSIGSFDYIVDDVDSEIS 229
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 15/140 (10%)
Query: 37 SPAILFIIVILAVVFFISGVLQLLIRFVIRRRSSSSVSESNRFPEMSGSDAFQRQLQQLF 96
SP I+++L VFF G + + +R ++ + G ++Q
Sbjct: 36 SPTTAIIMIVLVSVFFALGCISVYMRRCLQHALGM---------DSGGGPGNWLNVRQT- 85
Query: 97 HLHDSGLDQAFIDALPVFLYREIMGL---KEPFDCAVCLCEFSEQDKLRLLPMCSHAFHI 153
+ GLD + I+ P F Y + L KE +C VCL EF + + LRL+P C H FH
Sbjct: 86 --TEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHP 143
Query: 154 DCIDTWLLSNSTCPLCRGNL 173
CID WL S +TCPLCR NL
Sbjct: 144 GCIDAWLRSQTTCPLCRANL 163
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 23 NSDYQKE--SSSGNKISPAILFIIVILAVVFFISGVLQLLIRFVIRRRSSSSVSESNRFP 80
N D K S++ +P + ++V L F + V +LI + R+ R
Sbjct: 28 NDDTSKHHRSATAGGFTPTTVVVLVALITAFVLLTVFSVLINRCAQARAPP------RRA 81
Query: 81 EMSGSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLYREI---MGLKE-PFDCAVCLCEFS 136
S + GLD+ ++A P +Y ++ M K P +CAVCL EF+
Sbjct: 82 FRSTASHQPVGGAAAASRASRGLDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFA 141
Query: 137 EQDKLRLLPMCSHAFHIDCIDTWLLSNSTCPLCRGNL 173
+ D+LR+LP C H FH DCID WL + TCPLCR NL
Sbjct: 142 DSDELRVLPACCHVFHPDCIDPWLAAAVTCPLCRANL 178
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 41 LFIIVILAVVFFISGVLQLLIRFVIRRRSSSSVSESNRFPEMSGSDAFQRQLQQLFHLHD 100
+ +I IL + L+ ++ R +SS N +G F Q +
Sbjct: 59 IALIGILTSALILVSYYTLISKYCHRHHQTSSSETLNL--NHNGEGFFSST--QRISTNG 114
Query: 101 SGLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLPMCSHAFHIDCIDTWL 160
GL+++ I ++ V+ Y+ G + DC+VCL EF E + LRLLP C+HAFH+ CIDTWL
Sbjct: 115 DGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWL 174
Query: 161 LSNSTCPLCRG 171
S+S CPLCR
Sbjct: 175 KSHSNCPLCRA 185
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 101 SGLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLPMCSHAFHIDCIDTWL 160
SGLD+ I++LP+F + + G K+ DC+VCL +F + LRLLP C HAFHI CID WL
Sbjct: 96 SGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWL 155
Query: 161 LSNSTCPLCR 170
++TCPLCR
Sbjct: 156 EQHATCPLCR 165
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 91.7 bits (226), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 5/150 (3%)
Query: 31 SSGNKISPAILFIIVILAVVFFISGVLQLLIRFVIRRRSSSSVSESNRFPEMSGSDAFQR 90
+S +SP ++ I I A F ++ L+ ++ ++ + SES R + ++ +R
Sbjct: 53 ASNPNLSPLVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPER 112
Query: 91 QLQQ-LFHLHDS--GLDQAFIDALPVF-LYREIMGLK-EPFDCAVCLCEFSEQDKLRLLP 145
Q F L S GLD I + F L + G K DC++CL EF+E + LRLLP
Sbjct: 113 GDQDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLP 172
Query: 146 MCSHAFHIDCIDTWLLSNSTCPLCRGNLYI 175
C+H FH+ CID WL S+S CPLCR + +
Sbjct: 173 KCNHTFHVVCIDRWLKSHSNCPLCRAKIIV 202
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 29/199 (14%)
Query: 26 YQKESSSGNKISPAILFIIVILAVVFFISGVLQLLIRF--------VIRRRSSSSVSESN 77
+ + SSSG + +I ILA F + +I+ + RRR SS +
Sbjct: 31 FPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSS----D 86
Query: 78 RFPEMSGSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLY--REIMGLKEPF-----DCAV 130
+ P M S H + GLD++ I A+PVF + R+++ +E +C+V
Sbjct: 87 QNPLMIYSP----------HEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSV 136
Query: 131 CLCEFSEQDKLRLLPMCSHAFHIDCIDTWLLSNSTCPLCRGNLYIHGLGYENPVFEYEYP 190
CL EF E +KLR++P C H FHIDCID WL N+ CPLCR ++ + + P
Sbjct: 137 CLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSSP 196
Query: 191 REDDGFPVSANGGIGASLG 209
RE+ + N G LG
Sbjct: 197 RENSPHSRNRNLEPGLVLG 215
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 66/114 (57%), Gaps = 10/114 (8%)
Query: 84 GSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLYREIMGLK---EPFDCAVCLCEFSEQDK 140
G AF R+ + GL + I++ P FLY ++ GLK +CA+CL EF +++
Sbjct: 88 GEVAFTRRTSR-------GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEET 140
Query: 141 LRLLPMCSHAFHIDCIDTWLLSNSTCPLCRGNLYIHGLGYENPVFEYEYPREDD 194
LRL+P CSHAFH CID WL S STCP+CR +L +N ++ + P ++
Sbjct: 141 LRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPPKPGSDQNSLYPFIRPHDNQ 194
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 100 DSGLDQAFIDALPVFLY--REIMGLKEPFDCAVCLCEFSEQDKLRLLPMCSHAFHIDCID 157
D LDQA +D +P+F+Y + +E +C+VCL EF E+D+ RLLP C H+FH+DCID
Sbjct: 78 DQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCID 137
Query: 158 TWLLSNSTCPLCRG 171
TW S STCPLCR
Sbjct: 138 TWFRSRSTCPLCRA 151
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 74/156 (47%), Gaps = 17/156 (10%)
Query: 22 YNSDYQ---KESSSGNKISPAILFIIVILAVVFFISGVLQLLIRFVIRRRSSSSVSESNR 78
+NSD+ S+ + S +L + L+ V I L L RFV+RRR +
Sbjct: 11 FNSDHHSFWPNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLRRRREA------- 63
Query: 79 FPEMSGSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLYREIMGLK-EPFDCAVCLCEFSE 137
G R F + GL+ I +LP F G+ +CAVCL E
Sbjct: 64 ---FRGLPVIFRHP---FEMPKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKE 117
Query: 138 QDKLRLLPMCSHAFHIDCIDTWLLSNSTCPLCRGNL 173
QDK R LP C H FH+DC+DTWL + STCP+CR +
Sbjct: 118 QDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEV 153
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 102 GLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLPMCSHAFHIDCIDTWLL 161
GLD I +LPVF + + K+P +CAVCL EF E + R+LP C H FH+DCID W
Sbjct: 94 GLDPNVIKSLPVFTFSDETH-KDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFH 152
Query: 162 SNSTCPLCR 170
S+STCPLCR
Sbjct: 153 SHSTCPLCR 161
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 92 LQQLFHLHDSGLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLPMCSHAF 151
++ + GL ++ I+++ V +++ G+ + +C+VCL EF E + LRLLP CSHAF
Sbjct: 99 FHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAF 158
Query: 152 HIDCIDTWLLSNSTCPLCRGNLYIHGLGYENPVFEYEYPREDD 194
H++CIDTWLLS+ CPLCR + L E P E E + D
Sbjct: 159 HLNCIDTWLLSHKNCPLCRAPVL---LITEPPHQETETNHQPD 198
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 32/167 (19%)
Query: 26 YQKESSSGNKISPAILFIIVILAVVFFISGVLQLLIRF--------VIRRRSSSSVSESN 77
+ + SS+G + +I ILA F + +I+ ++ R S S ++
Sbjct: 24 FHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRND 83
Query: 78 RFPEMSGSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLYRE--------------IMGLK 123
+ P M S L GLD++ I A+P+F +++ K
Sbjct: 84 QDPLMVYSP----------ELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEK 133
Query: 124 EPFDCAVCLCEFSEQDKLRLLPMCSHAFHIDCIDTWLLSNSTCPLCR 170
+C+VCL EF +++KLR++P CSH FHIDCID WL +N+ CPLCR
Sbjct: 134 RSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCR 180
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 98 LHDSGLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLPMCSHAFHIDCID 157
LH++GLD + ++ V +++ K+ +CAVCL + + DK R+LP C+H FH+DCID
Sbjct: 91 LHNAGLDSKILQSIHVVVFK-CTDFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCID 149
Query: 158 TWLLSNSTCPLCRGNL 173
W S+STCPLCR +
Sbjct: 150 MWFQSHSTCPLCRNTV 165
>sp|Q9FIR0|ATL30_ARATH RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2
SV=1
Length = 289
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 10 LASAPSSSSSLPYNSDYQKESSSGNKISPAILFIIVILAVVFFISGVLQLLIR-FVIRRR 68
+A + ++++PY + + P ++ + VIL VVFFI + F
Sbjct: 3 IAKPINQNTTVPYPPQHYSKP-------PLVIILTVILLVVFFIGFFAIYFCKCFYHTLT 55
Query: 69 SSSSVSESNRFPEMSGSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLYREIMGLKEP--- 125
+ + N PE + Q Q + + + GL+ I + P+F + + L+E
Sbjct: 56 EAWNHHYHNGLPE----NQIQAQQEPVQPPVNPGLEPHIIQSYPLFPFSSVKDLREDKYG 111
Query: 126 FDCAVCLCEFSEQD-KLRLLPMCSHAFHIDCIDTWLLSNSTCPLCRGNL 173
+CA+CL EF E+ LRLL C H FH +CID WL SN TCP+CR NL
Sbjct: 112 LECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLESNKTCPVCRRNL 160
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 102 GLDQAFIDALPVFLYREIMGLKEPF----------DCAVCLCEFSEQDKLRLLPMCSHAF 151
GLD + I LP+FLY +P DCAVCL EF E D +R LP+C HAF
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 152 HIDCIDTWLLSNSTCPLCRGNL 173
H++CID WL S+ CPLCR +
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAI 201
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 102 GLDQAFIDALPVFLYREIMGLK---EPFDCAVCLCEFSEQDKLRLLPMCSHAFHIDCIDT 158
GLD I+ P F+Y E+ K +CA+CL EF + + LRLLP C H FH CI
Sbjct: 95 GLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCIGA 154
Query: 159 WLLSNSTCPLCRGNL 173
WL + TCP+CR NL
Sbjct: 155 WLQGHVTCPVCRTNL 169
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 58/103 (56%), Gaps = 11/103 (10%)
Query: 81 EMSGSDAFQRQLQQLFHLHDS------GLDQAFIDALPVFLYREIMGLKEPFDCAVCLCE 134
E SGS F L Q F L++ GL + ID L Y E LK C+VC+ E
Sbjct: 654 EESGSLPFL-SLAQFFLLNEDDDDQPRGLTKEQIDNLSTRNYGENDALK---TCSVCITE 709
Query: 135 FSEQDKLRLLPMCSHAFHIDCIDTWLLSNSTCPLCRGNLYIHG 177
++E +KLR LP CSH +HI CID WL NSTCP+CR + + G
Sbjct: 710 YTEGNKLRKLP-CSHEYHIHCIDRWLSENSTCPICRRAVLVAG 751
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 62/110 (56%), Gaps = 17/110 (15%)
Query: 64 VIRRRSSSSVSESNRFPEMSGSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLYREIMGLK 123
V+ RR + RF + G DA L ++GL + +LP+ +R+ K
Sbjct: 80 VVTRR------QRRRFIFVPGQDA----------LSNTGLTSFELSSLPIVFFRQ-DSCK 122
Query: 124 EPFDCAVCLCEFSEQDKLRLLPMCSHAFHIDCIDTWLLSNSTCPLCRGNL 173
+ +C++CL E + DK RLLP C+H+FH++CID W S+STCP+CR +
Sbjct: 123 DGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 81/148 (54%), Gaps = 14/148 (9%)
Query: 26 YQKESSSGNKISPAILFIIVILAVVFFISGVLQLLIRFVIRRRSSSSVSESNRFPEMSGS 85
Y +S+ ++I + V + V+ + LL+ +++RR S+++V S+ + G
Sbjct: 9 YIPSNSTESQILKFTFIVCVPICVILIV-----LLVLYIMRRNSNTNVDWSS----LGGF 59
Query: 86 DAFQRQLQQLFHLHDSGLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLP 145
L + GL + + LP+ +Y+E + + C+VCL ++ ++KL+ +P
Sbjct: 60 VPTNNNLST----AELGLSKDIREMLPIVIYKESFTVNDT-QCSVCLGDYQAEEKLQQMP 114
Query: 146 MCSHAFHIDCIDTWLLSNSTCPLCRGNL 173
C H FH++CID WL S++TCPLCR +L
Sbjct: 115 SCGHTFHMECIDLWLTSHTTCPLCRLSL 142
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 31/171 (18%)
Query: 9 LLASAPSSS---SSLPYNSDYQKESSSGNKISPAILFIIVILAVVFFISGVLQLLIRFVI 65
LL A S+S +S P+NSD +L + V+L + I G++ + +
Sbjct: 8 LLQEANSTSPAEASPPFNSDL-------------VLILAVLLCALTCIIGLIAVSRCAWL 54
Query: 66 RRRSSSSVSESNRFPEMSGSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLYREIMGLKEP 125
RR +S + S+ P ++ ++ GL + + +LP Y E
Sbjct: 55 RRIASRNRSDQTHPPPVAAAN--------------KGLKKKVLRSLPKLTYSPDSPPAEK 100
Query: 126 F-DCAVCLCEFSEQDKLRLLPMCSHAFHIDCIDTWLLSNSTCPLCRGNLYI 175
+CA+CL EF+ D+LR+LP C H FH+ CIDTWL S+S+CP CR L +
Sbjct: 101 LVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVV 151
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 103 LDQAFIDALPVFLYREIMGLKEPFD-CAVCLCEFSEQDKLRLLPMCSHAFHIDCIDTWLL 161
LD ++ +P+F+Y + + P + C+VCL EF E D+ R+LP C H FH+DCIDTW
Sbjct: 88 LDPTVLEKIPIFVY-SVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFR 146
Query: 162 SNSTCPLCRG 171
S S+CPLCR
Sbjct: 147 SRSSCPLCRA 156
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 102 GLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLPMCSHAFHIDCIDTWLL 161
GLD + +LPV+ Y + + DC +CL +F E + ++++P C H FH+DC+DTWL
Sbjct: 115 GLDSQAVRSLPVYRYTKAAKQRNE-DCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLS 173
Query: 162 SNSTCPLCRGNLYI--HGLGYENP 183
S TCPLCR N LG + P
Sbjct: 174 SYVTCPLCRSNQLFSDKDLGMQEP 197
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 23/115 (20%)
Query: 59 LLIRFVIRRRSSSSVSESNRFPEMSGSDAFQRQLQQLFHLHDSGLDQAFIDALPVFLYRE 118
L +FV+ RRS+ F ++S S Q + GLD I +LP F
Sbjct: 48 LYAKFVLHRRSA--------FQDLSFSVVSQPPKR--------GLDSLVIASLPTF---- 87
Query: 119 IMGLKEPF---DCAVCLCEFSEQDKLRLLPMCSHAFHIDCIDTWLLSNSTCPLCR 170
++G+K +CAVCL E+D R+LP C H FH+ C+DTWL + STCP+CR
Sbjct: 88 VVGIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCR 142
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 58/103 (56%), Gaps = 11/103 (10%)
Query: 81 EMSGSDAFQRQLQQLFHLHDS------GLDQAFIDALPVFLYREIMGLKEPFDCAVCLCE 134
E SGS F L Q F L++ GL + ID L + E LK C+VC+ E
Sbjct: 536 EESGSLPFL-SLAQFFLLNEDDDDQPRGLTKEQIDNLSTRNFGENDALK---TCSVCITE 591
Query: 135 FSEQDKLRLLPMCSHAFHIDCIDTWLLSNSTCPLCRGNLYIHG 177
++E +KLR LP CSH +H+ CID WL NSTCP+CR + + G
Sbjct: 592 YTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICRRAVLVAG 633
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 102 GLDQAFIDALPVFLYREIMGLKEP----FDCAVCLCEFSEQDKLRLLPMCSHAFHIDCID 157
GLD I + P F+Y E G+ EP +C VCL EF + + LRL+P C H FH DC+D
Sbjct: 56 GLDAEAIKSFPSFVYTEARGI-EPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVD 114
Query: 158 TWLLSNSTCPLCRGNL 173
WL +STCP+CR +
Sbjct: 115 IWLSHSSTCPICRAKV 130
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 81 EMSGSDAFQRQLQQLFHLHDS------GLDQAFIDALPVFLYREIMGLKEPFDCAVCLCE 134
E SGS F L Q F L++ GL + ID L + E LK C+VC+ E
Sbjct: 519 EESGSLPFL-SLAQFFLLNEDDDDQPRGLTKEQIDNLSTRNFGENDALK---TCSVCITE 574
Query: 135 FSEQDKLRLLPMCSHAFHIDCIDTWLLSNSTCPLCRGNLYI 175
++E +KLR LP CSH +HI CID WL NSTCP+CR + +
Sbjct: 575 YTEGNKLRKLP-CSHEYHIHCIDRWLSENSTCPICRRAVLV 614
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 92 LQQLFHLHDS------GLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLP 145
L Q F L++ GL + ID L + + E LK C+VC+ E++E +KLR LP
Sbjct: 531 LAQFFLLNEDDDDQPRGLTKEQIDNLAMRSFGENDALK---TCSVCITEYTEGNKLRKLP 587
Query: 146 MCSHAFHIDCIDTWLLSNSTCPLCRGNLYIHG 177
CSH +H+ CID WL NSTCP+CR + G
Sbjct: 588 -CSHEYHVHCIDRWLSENSTCPICRRAVLASG 618
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Query: 30 SSSGNKISPAILFIIVILAVVFFISGVLQLLIRFVIRRRSSSSVSESNRFPEMSGSDAFQ 89
S+ K+ FI + FI VL +L +RR S+++V S+ M G F
Sbjct: 20 STESEKLKLYQAFIFSVPICFTFI--VLFVLYVIYLRRNSTTNVDWSSL--GMRGG-TFV 74
Query: 90 RQLQQLFHLHDSGLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLPMCSH 149
L + GL + + LPV +Y+E +K+ C+VCL ++ ++KL+ +P C H
Sbjct: 75 PTNNNL-STAELGLSKDIREMLPVVIYKESFIVKDS-QCSVCLGDYQAEEKLQQMPSCGH 132
Query: 150 AFHIDCIDTWLLSNSTCPLCRGNL 173
FH++CID WL S++TCPLCR +L
Sbjct: 133 TFHMECIDLWLTSHTTCPLCRLSL 156
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 10/85 (11%)
Query: 92 LQQLFHLHDS------GLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLP 145
L Q F L++ GL + ID L + + E LK C+VC+ E++E +KLR LP
Sbjct: 507 LAQFFLLNEDDEDQPRGLTKEQIDNLAMRSFGENDALK---TCSVCITEYTEGNKLRKLP 563
Query: 146 MCSHAFHIDCIDTWLLSNSTCPLCR 170
CSH +H+ CID WL NSTCP+CR
Sbjct: 564 -CSHEYHVHCIDRWLSENSTCPICR 587
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 102 GLDQAFIDALPVFLYREIMGLKEPFDCAVCLCEFSEQDKLRLLPMCSHAFHIDCIDTWLL 161
GL+ + I +LP+F + + L +C+VCL EF + + R++P C H FH+ CID W
Sbjct: 51 GLNPSIIKSLPIFTFSAVTALFA-MECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFH 109
Query: 162 SNSTCPLCRGNL 173
S+S+CPLCR +
Sbjct: 110 SHSSCPLCRSQI 121
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,447,052
Number of Sequences: 539616
Number of extensions: 5647982
Number of successful extensions: 16358
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 296
Number of HSP's successfully gapped in prelim test: 172
Number of HSP's that attempted gapping in prelim test: 15869
Number of HSP's gapped (non-prelim): 503
length of query: 360
length of database: 191,569,459
effective HSP length: 119
effective length of query: 241
effective length of database: 127,355,155
effective search space: 30692592355
effective search space used: 30692592355
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)