Your job contains 1 sequence.
>039000
MARIRDRTEDFKDVVRHTAVSLGYDESKLAAIMASFIIHKPRERSSFTKAALKTLESVGA
LEQFILNHRKDYVEMHRTSEQERDSIEHEVTAFIKTCKEKIDILQNSINDDEANSKGWLG
LKVDRSNADTIAHKHGVVLILSEKLHSVTAQFDQMRAIRFQDAINRAMPRRKLKRETVSK
YADTSNPNKSDMRELDEIQPEPLTVQQQLLDDETRALQVELTSLLDAVQQTETKMVEMSA
LNHLMSTHILHQAKQIEHLYEQ
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039000
(262 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2017632 - symbol:SYP81 "syntaxin of plants 81"... 932 1.3e-93 1
ZFIN|ZDB-GENE-050522-397 - symbol:stx18 "syntaxin 18" spe... 231 2.5e-19 1
UNIPROTKB|E1C1M8 - symbol:STX18 "Uncharacterized protein"... 158 2.5e-16 2
UNIPROTKB|F1N1W6 - symbol:STX18 "Uncharacterized protein"... 145 1.1e-14 2
UNIPROTKB|D6RF48 - symbol:STX18 "Syntaxin-18" species:960... 145 1.2e-14 2
UNIPROTKB|Q9P2W9 - symbol:STX18 "Syntaxin-18" species:960... 145 1.8e-14 2
MGI|MGI:1918366 - symbol:Stx18 "syntaxin 18" species:1009... 135 1.7e-13 2
RGD|1310058 - symbol:Stx18 "syntaxin 18" species:10116 "R... 133 2.9e-13 2
UNIPROTKB|Q68FW4 - symbol:Stx18 "Syntaxin-18" species:101... 133 2.9e-13 2
UNIPROTKB|I3L7R7 - symbol:LOC100621709 "Uncharacterized p... 159 3.9e-10 1
POMBASE|SPCC895.04c - symbol:ufe1 "SNARE Ufe1 (predicted)... 155 4.6e-09 1
UNIPROTKB|E2RGW4 - symbol:STX18 "Uncharacterized protein"... 148 3.7e-08 1
UNIPROTKB|J9P4H8 - symbol:STX18 "Uncharacterized protein"... 148 3.8e-08 1
>TAIR|locus:2017632 [details] [associations]
symbol:SYP81 "syntaxin of plants 81" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] InterPro:IPR010989 PROSITE:PS00914
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016192
EMBL:AC025294 GO:GO:0015031 SUPFAM:SSF47661 eggNOG:NOG271515
KO:K08492 InterPro:IPR019529 Pfam:PF10496 EMBL:BT002917
EMBL:BT004352 EMBL:AY086569 IPI:IPI00540270 RefSeq:NP_564597.1
UniGene:At.37765 ProteinModelPortal:P59277 IntAct:P59277
STRING:P59277 PaxDb:P59277 PRIDE:P59277 EnsemblPlants:AT1G51740.1
GeneID:841599 KEGG:ath:AT1G51740 GeneFarm:3898 TAIR:At1g51740
HOGENOM:HOG000005979 InParanoid:P59277 OMA:IEHEVGV PhylomeDB:P59277
ProtClustDB:CLSN2688688 Genevestigator:P59277 Uniprot:P59277
Length = 310
Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
Identities = 190/265 (71%), Positives = 221/265 (83%)
Query: 1 MARIRDRTEDFKDVVRHTAVSLGYDESKLAAIMASFIIHKPRERSSFTKAALKTLESVGA 60
M+R RDRTEDFKD VR++AVS+GY+ESK+A+ MASFIIHKP+ERS FTKAA KTL+S+
Sbjct: 1 MSRFRDRTEDFKDSVRNSAVSIGYNESKVASTMASFIIHKPKERSPFTKAAFKTLDSIKE 60
Query: 61 LEQFILNHRKDYVEMHRTSEQERDSIEHEVTAFIKTCKEKIDILQNSINDDEANSKGWLG 120
LE F+L HRKDYV++HRT+EQE+DSIE EV AFIK CKE+IDIL NSI ++EANSKGWLG
Sbjct: 61 LELFMLKHRKDYVDLHRTTEQEKDSIEQEVAAFIKACKEQIDILINSIRNEEANSKGWLG 120
Query: 121 LKVDRSNADTIAHKHGVVLILSEKLHSVTAQFDQMRAIRFQDAINRAMPRRKLKRETVSK 180
L D NAD+IAHKHGVVLILSEKLHSVTAQFDQ+RA RFQD INRAMPRRK KR V K
Sbjct: 121 LPADNFNADSIAHKHGVVLILSEKLHSVTAQFDQLRATRFQDIINRAMPRRKPKR--VIK 178
Query: 181 YADTSNPN--KSDMRELDEIQPEPLTVQQQ-LLDDETRALQVELTSLLDAVQQTETKMVE 237
A N S+ E DEIQ +P +QQQ LLDDET+ALQVEL++LLD +QTETKMVE
Sbjct: 179 EATPINTTLGNSESIEPDEIQAQPRRLQQQQLLDDETQALQVELSNLLDGARQTETKMVE 238
Query: 238 MSALNHLMSTHILHQAKQIEHLYEQ 262
MSALNHLM+TH+L QA+QIE LY+Q
Sbjct: 239 MSALNHLMATHVLQQAQQIEFLYDQ 263
>ZFIN|ZDB-GENE-050522-397 [details] [associations]
symbol:stx18 "syntaxin 18" species:7955 "Danio
rerio" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005484 "SNAP receptor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] InterPro:IPR006012 PROSITE:PS00914 PROSITE:PS50192
ZFIN:ZDB-GENE-050522-397 GO:GO:0016021 GO:GO:0006886 GO:GO:0016192
GO:GO:0005789 EMBL:BC095763 IPI:IPI00607419 RefSeq:NP_001019596.1
UniGene:Dr.87736 STRING:Q4VBI7 GeneID:554130 KEGG:dre:554130
CTD:53407 eggNOG:NOG271515 HOVERGEN:HBG054890 InParanoid:Q4VBI7
KO:K08492 OrthoDB:EOG4QNMWX NextBio:20880690 InterPro:IPR019529
Pfam:PF10496 Uniprot:Q4VBI7
Length = 314
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 69/235 (29%), Positives = 122/235 (51%)
Query: 40 KPRERSSFTKAALKTLESVGALEQFILNHRKDYV--------EMHRTSEQERDSIEHEVT 91
+PR+R SF+ A + + ++ L+ F+L HRKDYV E+ R ++ ERD I+ +
Sbjct: 41 RPRQRDSFSCKAREVISNISKLKDFLLQHRKDYVNAGSVMSSEVSRMTDSERDQIDQDAQ 100
Query: 92 AFIKTCKEKIDILQNSINDDEANSKGWLGLKVDRSNA-DTI-AHKHGVVLILSE-KLHSV 148
F++TC E I L++ ++ + + + +K R+ D I ++ GV + SE + V
Sbjct: 101 IFMRTCAEAISQLRSEMDKKQVSMQ----VKDHRAAVLDLIDSYLKGVCKLYSEQRAVRV 156
Query: 149 TAQFDQMRAIRFQ-DAINRAMPRRKLKRETVSKYADTSNPNK-SDMRELDEIQPEPLTVQ 206
D+ R R + + IN +R+ E K N + + R D++ PE +
Sbjct: 157 KRVVDKKRLSRLEPEQINTE--KRQSDGEENDKPVSDGNVDLWEENRVEDDLSPEEI--- 211
Query: 207 QQLLDDETRALQVELTSLLDAVQQTETKMVEMSALNHLMSTHILHQAKQIEHLYE 261
Q+ + E + L E+ SLLD V+Q E K+VE+S L + S +L Q +I+ +++
Sbjct: 212 -QMFEQENQRLVGEMNSLLDEVRQIEGKVVEISRLQEIFSEKVLQQETEIDSIHQ 265
>UNIPROTKB|E1C1M8 [details] [associations]
symbol:STX18 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005484 "SNAP receptor activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR006012
PROSITE:PS00914 GO:GO:0006886 GO:GO:0016020 GO:GO:0005622 CTD:53407
KO:K08492 InterPro:IPR019529 Pfam:PF10496 OMA:SHIMSDY
GeneTree:ENSGT00390000014853 EMBL:AADN02015072 EMBL:AADN02015073
IPI:IPI00578318 RefSeq:NP_001239087.1 UniGene:Gga.12237
Ensembl:ENSGALT00000024208 GeneID:422848 KEGG:gga:422848
NextBio:20825419 Uniprot:E1C1M8
Length = 333
Score = 158 (60.7 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 48/169 (28%), Positives = 78/169 (46%)
Query: 42 RERSSFTKAALKTLESVGALEQFILNHRKDYV--------EMHRTSEQERDSIEHEVTAF 93
R RS FT A + + ++G L+ F+L HRKDY+ E R ++ ERD I+ + F
Sbjct: 42 RSRSDFTGRAREVISNIGKLKDFLLQHRKDYINAYSHIMSEYGRMTDTERDQIDQDAQIF 101
Query: 94 IKTCKEKIDILQNSINDDEANSKGWLGLKVDRSNADTIAHKHGVVLILSEKLHSVTAQFD 153
++TC + I L+ EA+ D +A H+ V+ + + L V +
Sbjct: 102 MRTCADAIHQLRT-----EAHK--------DVQSAQVKEHRTAVLDFIEDYLKRVCKLYS 148
Query: 154 QMRAIRFQDAINRAMPRRKLKRETVSKYADTSNPNKSDMRELDEIQPEP 202
+ RAIR + I++ KL+ E +P K LDE + +P
Sbjct: 149 EQRAIRVKRVIDKKR-LSKLEPEQSHVTRSALSPEKFSQNSLDESEEKP 196
Score = 100 (40.3 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 196 DEIQPEPLTVQQQLLDDETRALQVELTSLLDAVQQTETKMVEMSALNHLMSTHILHQAKQ 255
DE+ PE + Q+ + E + L E+ +L D V+Q E K+VE+S L + + +L Q
Sbjct: 223 DELSPEEI----QMFEQENQRLVGEMNNLFDEVRQIEGKVVEISRLQEIFTEKVLQQETD 278
Query: 256 IEHLYE 261
I+++++
Sbjct: 279 IDNIHQ 284
>UNIPROTKB|F1N1W6 [details] [associations]
symbol:STX18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005484 "SNAP
receptor activity" evidence=IEA] InterPro:IPR006012 PROSITE:PS00914
GO:GO:0006886 GO:GO:0016020 GO:GO:0005622 InterPro:IPR019529
Pfam:PF10496 GeneTree:ENSGT00390000014853 OMA:IENRTAY
EMBL:DAAA02018422 EMBL:DAAA02018423 IPI:IPI00718742
UniGene:Bt.61487 Ensembl:ENSBTAT00000007503 Uniprot:F1N1W6
Length = 335
Score = 145 (56.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 48/183 (26%), Positives = 84/183 (45%)
Query: 41 PRERSSFTKAALKTLESVGALEQFILNHRKDYV--------EMHRTSEQERDSIEHEVTA 92
PR + F+ A + + +G L F+L HRK+Y+ E R ++ ERD I+ +
Sbjct: 43 PRPKDDFSSRAREVISHIGKLRDFLLEHRKNYINAYSHVMSEYGRMTDTERDQIDQDAQT 102
Query: 93 FIKTCKEKIDILQNSINDDEANSKGWLGLKVDRSNADTIAHKHGVVLILSEKLHSVTAQF 152
F++TC E I L+ + KG +V H+ V+ + L V +
Sbjct: 103 FMRTCSEAIQQLRTQAH------KGIHSQQVKE-------HRTAVLDFTEDYLKRVCKLY 149
Query: 153 DQMRAIRFQDAINRAM-----PRRKLK-RETVSKYADTSNPNK-SDMRELDEIQPEPLTV 205
+ RAIR + +++ P K RE++S + +P+K S+ + + E PE + V
Sbjct: 150 SEQRAIRVKRVVDKKRLSKLEPEPNTKTRESMSSEKVSQSPSKDSEEKPVPEEYPEKVPV 209
Query: 206 QQQ 208
+ Q
Sbjct: 210 EAQ 212
Score = 101 (40.6 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 21/66 (31%), Positives = 40/66 (60%)
Query: 196 DEIQPEPLTVQQQLLDDETRALQVELTSLLDAVQQTETKMVEMSALNHLMSTHILHQAKQ 255
DE+ PE + Q+ + E + L E+ SL D V+Q E K+VE++ L + + +L Q +
Sbjct: 225 DELSPEEI----QMFEQENQRLIGEMNSLFDEVRQIEGKVVEITRLQEIFTEKVLQQEAE 280
Query: 256 IEHLYE 261
I+++++
Sbjct: 281 IDNIHQ 286
>UNIPROTKB|D6RF48 [details] [associations]
symbol:STX18 "Syntaxin-18" species:9606 "Homo sapiens"
[GO:0005484 "SNAP receptor activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR006012 PROSITE:PS00914
GO:GO:0006886 GO:GO:0016020 GO:GO:0005622 OrthoDB:EOG4QNMWX
InterPro:IPR019529 Pfam:PF10496 HGNC:HGNC:15942
HOGENOM:HOG000007595 EMBL:AC110814 EMBL:AC013725 IPI:IPI00964793
ProteinModelPortal:D6RF48 Ensembl:ENST00000505286
ArrayExpress:D6RF48 Bgee:D6RF48 Uniprot:D6RF48
Length = 308
Score = 145 (56.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 48/183 (26%), Positives = 84/183 (45%)
Query: 41 PRERSSFTKAALKTLESVGALEQFILNHRKDYV--------EMHRTSEQERDSIEHEVTA 92
PR + F+ A + + +G L F+L HRKDY+ E R ++ ERD I+ +
Sbjct: 43 PRPKGDFSSRAREVISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQI 102
Query: 93 FIKTCKEKIDILQNSINDDEANSKGWLGLKVDRSNADTIAHKHGVVLILSEKLHSVTAQF 152
F++TC E I L+ + E +S+ +V H+ V+ + + L V +
Sbjct: 103 FMRTCSEAIQQLRTEAHK-EIHSQ-----QVKE-------HRTAVLDFIEDYLKRVCKLY 149
Query: 153 DQMRAIRFQDAINRAM-----PRRKLK-RETVSKYADTSNPNK-SDMRELDEIQPEPLTV 205
+ RAIR + +++ P K RE+ S + +P+K S+ E +PE +
Sbjct: 150 SEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPEKILA 209
Query: 206 QQQ 208
+ Q
Sbjct: 210 ETQ 212
Score = 99 (39.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 196 DEIQPEPLTVQQQLLDDETRALQVELTSLLDAVQQTETKMVEMSALNHLMSTHILHQAKQ 255
DE+ PE + Q+ + E + L E+ SL D V+Q E ++VE+S L + + +L Q +
Sbjct: 225 DELSPEEI----QMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAE 280
Query: 256 IEHLYE 261
I+ +++
Sbjct: 281 IDSIHQ 286
>UNIPROTKB|Q9P2W9 [details] [associations]
symbol:STX18 "Syntaxin-18" species:9606 "Homo sapiens"
[GO:0005484 "SNAP receptor activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005783 "endoplasmic reticulum" evidence=TAS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=TAS]
InterPro:IPR006012 PROSITE:PS00914 PROSITE:PS50192 GO:GO:0005783
GO:GO:0016021 GO:GO:0006886 GO:GO:0000139 GO:GO:0005789
GO:GO:0006888 CTD:53407 eggNOG:NOG271515 HOVERGEN:HBG054890
KO:K08492 InterPro:IPR019529 Pfam:PF10496 EMBL:AB028741
EMBL:AY453396 EMBL:BT007150 EMBL:BT020135 EMBL:BC014613
IPI:IPI00027194 RefSeq:NP_058626.1 UniGene:Hs.584913
ProteinModelPortal:Q9P2W9 SMR:Q9P2W9 IntAct:Q9P2W9
MINT:MINT-1378736 STRING:Q9P2W9 PhosphoSite:Q9P2W9 DMDM:17369347
PaxDb:Q9P2W9 PRIDE:Q9P2W9 DNASU:53407 Ensembl:ENST00000306200
GeneID:53407 KEGG:hsa:53407 UCSC:uc003gic.3 GeneCards:GC04M004417
H-InvDB:HIX0120162 HGNC:HGNC:15942 HPA:HPA003019 MIM:606046
neXtProt:NX_Q9P2W9 PharmGKB:PA38061 HOGENOM:HOG000007595
InParanoid:Q9P2W9 OMA:SHIMSDY PhylomeDB:Q9P2W9 GenomeRNAi:53407
NextBio:56080 ArrayExpress:Q9P2W9 Bgee:Q9P2W9 CleanEx:HS_STX18
Genevestigator:Q9P2W9 GermOnline:ENSG00000168818 Uniprot:Q9P2W9
Length = 335
Score = 145 (56.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 48/183 (26%), Positives = 84/183 (45%)
Query: 41 PRERSSFTKAALKTLESVGALEQFILNHRKDYV--------EMHRTSEQERDSIEHEVTA 92
PR + F+ A + + +G L F+L HRKDY+ E R ++ ERD I+ +
Sbjct: 43 PRPKGDFSSRAREVISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQI 102
Query: 93 FIKTCKEKIDILQNSINDDEANSKGWLGLKVDRSNADTIAHKHGVVLILSEKLHSVTAQF 152
F++TC E I L+ + E +S+ +V H+ V+ + + L V +
Sbjct: 103 FMRTCSEAIQQLRTEAHK-EIHSQ-----QVKE-------HRTAVLDFIEDYLKRVCKLY 149
Query: 153 DQMRAIRFQDAINRAM-----PRRKLK-RETVSKYADTSNPNK-SDMRELDEIQPEPLTV 205
+ RAIR + +++ P K RE+ S + +P+K S+ E +PE +
Sbjct: 150 SEQRAIRVKRVVDKKRLSKLEPEPNTKTRESTSSEKVSQSPSKDSEENPATEERPEKILA 209
Query: 206 QQQ 208
+ Q
Sbjct: 210 ETQ 212
Score = 99 (39.9 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 196 DEIQPEPLTVQQQLLDDETRALQVELTSLLDAVQQTETKMVEMSALNHLMSTHILHQAKQ 255
DE+ PE + Q+ + E + L E+ SL D V+Q E ++VE+S L + + +L Q +
Sbjct: 225 DELSPEEI----QMFEQENQRLIGEMNSLFDEVRQIEGRVVEISRLQEIFTEKVLQQEAE 280
Query: 256 IEHLYE 261
I+ +++
Sbjct: 281 IDSIHQ 286
>MGI|MGI:1918366 [details] [associations]
symbol:Stx18 "syntaxin 18" species:10090 "Mus musculus"
[GO:0005484 "SNAP receptor activity" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA]
InterPro:IPR006012 PROSITE:PS00914 PROSITE:PS50192 MGI:MGI:1918366
GO:GO:0016021 GO:GO:0006886 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 CTD:53407 eggNOG:NOG271515 HOVERGEN:HBG054890
KO:K08492 OrthoDB:EOG4QNMWX InterPro:IPR019529 Pfam:PF10496
HOGENOM:HOG000007595 OMA:SHIMSDY EMBL:AK007700 EMBL:AK169273
EMBL:AK170165 EMBL:BC021362 IPI:IPI00112000 IPI:IPI00753247
IPI:IPI00756519 RefSeq:NP_081235.2 UniGene:Mm.18959
ProteinModelPortal:Q8VDS8 SMR:Q8VDS8 STRING:Q8VDS8
PhosphoSite:Q8VDS8 PaxDb:Q8VDS8 PRIDE:Q8VDS8
Ensembl:ENSMUST00000031008 Ensembl:ENSMUST00000042146
Ensembl:ENSMUST00000114126 GeneID:71116 KEGG:mmu:71116
UCSC:uc008xfx.1 UCSC:uc008xfy.1 UCSC:uc008xfz.1
GeneTree:ENSGT00390000014853 InParanoid:Q8VDS8 ChiTaRS:STX18
NextBio:333047 Bgee:Q8VDS8 CleanEx:MM_STX18 Genevestigator:Q8VDS8
GermOnline:ENSMUSG00000029125 Uniprot:Q8VDS8
Length = 334
Score = 135 (52.6 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 44/182 (24%), Positives = 79/182 (43%)
Query: 41 PRERSSFTKAALKTLESVGALEQFILNHRKDYVEMH--------RTSEQERDSIEHEVTA 92
PR + F+ A + + +G L F+L HRK+Y+ + R ++ ERD I+ +
Sbjct: 43 PRPKGDFSSRAREVISHIGKLRDFLLEHRKEYINAYSHTMSDYGRMTDTERDQIDQDAQI 102
Query: 93 FIKTCKEKIDILQNSINDDEANSKGWLGLKVDRSNADTIAHKHGVVLILSEKLHSVTAQF 152
FI+TC E I L+ + E +S+ +V H+ V+ + + L V +
Sbjct: 103 FIRTCSEAIHQLRTEAHK-EIHSQ-----QVKE-------HRTAVLDFVDDYLKRVCKLY 149
Query: 153 DQMRAIRFQDAINRAM-------PRRKLKRETVSKYADTSNPNKSDMRELDEIQPEPLTV 205
+ RAIR + +++ P K K T K ++ + +E+ +PL
Sbjct: 150 SEQRAIRVKRVVDKKRLSKLEPEPHTKRKDSTSEKAPQNASQDSEGKPAAEELPEKPLAE 209
Query: 206 QQ 207
Q
Sbjct: 210 SQ 211
Score = 102 (41.0 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 196 DEIQPEPLTVQQQLLDDETRALQVELTSLLDAVQQTETKMVEMSALNHLMSTHILHQAKQ 255
DE+ PE + Q+ + E + L E+ SL D V+Q E K+VE+S L + + +L Q +
Sbjct: 224 DELSPEEI----QMFEQENQRLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQETE 279
Query: 256 IEHLYE 261
I+ +++
Sbjct: 280 IDSIHQ 285
>RGD|1310058 [details] [associations]
symbol:Stx18 "syntaxin 18" species:10116 "Rattus norvegicus"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005484 "SNAP
receptor activity" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR006012
PROSITE:PS00914 PROSITE:PS50192 RGD:1310058 GO:GO:0016021
GO:GO:0006886 GO:GO:0000139 GO:GO:0016192 GO:GO:0005789 CTD:53407
eggNOG:NOG271515 HOVERGEN:HBG054890 KO:K08492 OrthoDB:EOG4QNMWX
InterPro:IPR019529 Pfam:PF10496 HOGENOM:HOG000007595 OMA:SHIMSDY
GeneTree:ENSGT00390000014853 EMBL:BC079183 IPI:IPI00471565
RefSeq:NP_001012151.1 UniGene:Rn.53006 ProteinModelPortal:Q68FW4
IntAct:Q68FW4 STRING:Q68FW4 PRIDE:Q68FW4 Ensembl:ENSRNOT00000008410
GeneID:360953 KEGG:rno:360953 InParanoid:Q68FW4 NextBio:674703
ArrayExpress:Q68FW4 Genevestigator:Q68FW4
GermOnline:ENSRNOG00000006139 Uniprot:Q68FW4
Length = 334
Score = 133 (51.9 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 42/182 (23%), Positives = 81/182 (44%)
Query: 41 PRERSSFTKAALKTLESVGALEQFILNHRKDYV--------EMHRTSEQERDSIEHEVTA 92
PR + F+ A + + +G L F+L HRK+Y+ E R ++ ERD I+ +
Sbjct: 43 PRPKGDFSSRAREVISHIGKLRDFLLEHRKEYINAYSHTMSEYGRMTDTERDQIDQDAQI 102
Query: 93 FIKTCKEKIDILQNSINDDEANSKGWLGLKVDRSNADTIAHKHGVVLILSEKLHSVTAQF 152
F++TCK+ I L+ + E +S+ +V H+ V+ + + L V +
Sbjct: 103 FMRTCKDAIQQLRTEAHK-EIHSQ-----QVKE-------HRTAVLDFVEDYLKRVCKLY 149
Query: 153 DQMRAIRFQDAINRAM-------PRRKLKRETVSKYADTSNPNKSDMRELDEIQPEPLTV 205
+ RAIR + +++ P K K K + ++ + + +++ +PL
Sbjct: 150 SEQRAIRVKRVVDKKRLSKLEPEPHTKRKEPASEKSSHNASQDSEEKPAAEDLPEKPLAE 209
Query: 206 QQ 207
Q
Sbjct: 210 SQ 211
Score = 102 (41.0 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 196 DEIQPEPLTVQQQLLDDETRALQVELTSLLDAVQQTETKMVEMSALNHLMSTHILHQAKQ 255
DE+ PE + Q+ + E + L E+ SL D V+Q E K+VE+S L + + +L Q +
Sbjct: 224 DELSPEEI----QMFEQENQRLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQETE 279
Query: 256 IEHLYE 261
I+ +++
Sbjct: 280 IDSIHQ 285
>UNIPROTKB|Q68FW4 [details] [associations]
symbol:Stx18 "Syntaxin-18" species:10116 "Rattus
norvegicus" [GO:0005484 "SNAP receptor activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
InterPro:IPR006012 PROSITE:PS00914 PROSITE:PS50192 RGD:1310058
GO:GO:0016021 GO:GO:0006886 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 CTD:53407 eggNOG:NOG271515 HOVERGEN:HBG054890
KO:K08492 OrthoDB:EOG4QNMWX InterPro:IPR019529 Pfam:PF10496
HOGENOM:HOG000007595 OMA:SHIMSDY GeneTree:ENSGT00390000014853
EMBL:BC079183 IPI:IPI00471565 RefSeq:NP_001012151.1
UniGene:Rn.53006 ProteinModelPortal:Q68FW4 IntAct:Q68FW4
STRING:Q68FW4 PRIDE:Q68FW4 Ensembl:ENSRNOT00000008410 GeneID:360953
KEGG:rno:360953 InParanoid:Q68FW4 NextBio:674703
ArrayExpress:Q68FW4 Genevestigator:Q68FW4
GermOnline:ENSRNOG00000006139 Uniprot:Q68FW4
Length = 334
Score = 133 (51.9 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 42/182 (23%), Positives = 81/182 (44%)
Query: 41 PRERSSFTKAALKTLESVGALEQFILNHRKDYV--------EMHRTSEQERDSIEHEVTA 92
PR + F+ A + + +G L F+L HRK+Y+ E R ++ ERD I+ +
Sbjct: 43 PRPKGDFSSRAREVISHIGKLRDFLLEHRKEYINAYSHTMSEYGRMTDTERDQIDQDAQI 102
Query: 93 FIKTCKEKIDILQNSINDDEANSKGWLGLKVDRSNADTIAHKHGVVLILSEKLHSVTAQF 152
F++TCK+ I L+ + E +S+ +V H+ V+ + + L V +
Sbjct: 103 FMRTCKDAIQQLRTEAHK-EIHSQ-----QVKE-------HRTAVLDFVEDYLKRVCKLY 149
Query: 153 DQMRAIRFQDAINRAM-------PRRKLKRETVSKYADTSNPNKSDMRELDEIQPEPLTV 205
+ RAIR + +++ P K K K + ++ + + +++ +PL
Sbjct: 150 SEQRAIRVKRVVDKKRLSKLEPEPHTKRKEPASEKSSHNASQDSEEKPAAEDLPEKPLAE 209
Query: 206 QQ 207
Q
Sbjct: 210 SQ 211
Score = 102 (41.0 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 196 DEIQPEPLTVQQQLLDDETRALQVELTSLLDAVQQTETKMVEMSALNHLMSTHILHQAKQ 255
DE+ PE + Q+ + E + L E+ SL D V+Q E K+VE+S L + + +L Q +
Sbjct: 224 DELSPEEI----QMFEQENQRLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQETE 279
Query: 256 IEHLYE 261
I+ +++
Sbjct: 280 IDSIHQ 285
>UNIPROTKB|I3L7R7 [details] [associations]
symbol:LOC100621709 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005484 "SNAP
receptor activity" evidence=IEA] InterPro:IPR006012 PROSITE:PS00914
GO:GO:0006886 GO:GO:0016020 GO:GO:0005622 InterPro:IPR019529
Pfam:PF10496 OMA:SHIMSDY GeneTree:ENSGT00390000014853
Ensembl:ENSSSCT00000026563 Uniprot:I3L7R7
Length = 243
Score = 159 (61.0 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 61/236 (25%), Positives = 103/236 (43%)
Query: 55 LESVGALEQFILNHRKDYV--------EMHRTSEQERDSIEHEVTAFIKTCKEKIDILQN 106
+ +G L F+L HRKDY+ E R ++ ERD I+ + F++TC E I L+
Sbjct: 1 ISHIGKLRDFLLEHRKDYINAYSHTMSEYGRMTDTERDQIDQDAQTFMRTCSEAIQQLRA 60
Query: 107 SINDDEANSKGWLGLKVDRSNA-DTIAH--KHGVVLILSEKLHSVTAQFDQMRAIRFQDA 163
+ + + + +K RS D I K L ++ V D+ R + +
Sbjct: 61 QAHKEVPSQQ----VKEHRSAVLDFIEDYLKRVCKLYSEQRAIRVKRVVDKKRLSKLEPE 116
Query: 164 INRAMPRRKLKRETVSKYADTSNPNKSDMRELD------EIQPE-----------PLTVQ 206
N R + E VS+ + K E E QPE L+ +
Sbjct: 117 PN-TKARESMSPEKVSQSPSKDSEEKPATEEYSAEKIPAEAQPELGTWGDGKGEDELSPE 175
Query: 207 Q-QLLDDETRALQVELTSLLDAVQQTETKMVEMSALNHLMSTHILHQAKQIEHLYE 261
+ Q+ + E + L E+ SL D V+Q E K+VE+S L + + +L Q +I+ +++
Sbjct: 176 EVQMFEQENQRLIGEMNSLFDEVRQIEGKVVEISRLQEIFTEKVLQQEAEIDSIHQ 231
>POMBASE|SPCC895.04c [details] [associations]
symbol:ufe1 "SNARE Ufe1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005484 "SNAP receptor activity"
evidence=ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=ISS] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=ISS]
PROSITE:PS00914 PROSITE:PS50192 PomBase:SPCC895.04c GO:GO:0016021
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0005789 GO:GO:0015031
GO:GO:0006890 GO:GO:0005484 KO:K08492 InterPro:IPR019529
Pfam:PF10496 PIR:T41642 RefSeq:NP_588045.1 IntAct:O94531
EnsemblFungi:SPCC895.04c.1 GeneID:2538886 KEGG:spo:SPCC895.04c
eggNOG:euNOG10103 OMA:RQCVDIV OrthoDB:EOG4HX89V NextBio:20800065
Uniprot:O94531
Length = 319
Score = 155 (59.6 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 56/239 (23%), Positives = 111/239 (46%)
Query: 33 MASFIIHKPRERSSFTKAALKTLESVGALEQFILNHRKDYVEMHRTSEQERDSIEHEVTA 92
+ + ++ + R ++ K +T +V L + ++ + + E +RD IEHEV++
Sbjct: 44 IVNLLVFLKKIRGAYLKD--RTFSNVQRLSKPLMECSLEELSKLELDEVQRDEIEHEVSS 101
Query: 93 FIKTCKEKIDILQNSINDDEAN---SKGWL-GLKVDR--SNADT-IAHKHGVVLILSEKL 145
I +C +I LQ + + ++ GWL GL+ S +T +AH V+ L +L
Sbjct: 102 AISSCIHQIAKLQEIVKEQQSQIPKKSGWLQGLRDPSKLSKKETLVAHHSSVLWYLQSEL 161
Query: 146 HSVTAQFDQMRAIRFQDAINRAMPRRKLKRETVSKYADTSNP-NKSDMRELDEIQPEPLT 204
V++ ++ +R + R + KR S + T NP +++ E+ E + +
Sbjct: 162 SDVSSVLYHLQDLRLK--------RGQEKRNIASDFL-TKNPTDENSAVEIPESELQTFF 212
Query: 205 VQQQL--LDDETRALQVELTSLLDAVQQTETKMVEMSALNHLMSTHILHQAKQIEHLYE 261
QQQL L+ E L E ++ ++ T + +++ L +S + Q+ E LY+
Sbjct: 213 TQQQLQELEQENDVLLQEFEHTMERLRDTGKSLADITRLQSEISAQLSIQSSAAEKLYD 271
>UNIPROTKB|E2RGW4 [details] [associations]
symbol:STX18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005484 "SNAP
receptor activity" evidence=IEA] InterPro:IPR006012 PROSITE:PS00914
GO:GO:0006886 GO:GO:0016020 GO:GO:0005622 InterPro:IPR019529
Pfam:PF10496 GeneTree:ENSGT00390000014853 EMBL:AAEX03002502
Ensembl:ENSCAFT00000024868 Uniprot:E2RGW4
Length = 332
Score = 148 (57.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 44/172 (25%), Positives = 81/172 (47%)
Query: 41 PRERSSFTKAALKTLESVGALEQFILNHRKDYV--------EMHRTSEQERDSIEHEVTA 92
PR + F+ A + + +G L F+L HRKDY+ E R ++ ERD I+ +
Sbjct: 44 PRPKGDFSSRAREVISHIGKLRDFLLEHRKDYINAYSHIMSEYGRMTDTERDQIDQDAQT 103
Query: 93 FIKTCKEKIDILQNSINDDEANSKGWLGLKVDRSNADTIAHKHGVVLILSEKLHSVTAQF 152
F++TC E I L+ + E +S+ +V H+ V+ + + L V +
Sbjct: 104 FMRTCSEAIQQLRTQAHK-EIHSQ-----QVKE-------HRSAVLDFIEDYLKRVCKLY 150
Query: 153 DQMRAIRFQDAINRAMPRRKLKRETVSKYADTSNPNKSDMRELDEIQPEPLT 204
+ RAIR + +++ KL+ E +K ++++ K E + +P+T
Sbjct: 151 SEQRAIRVKRVVDKKR-LSKLEPEPHTKTRESTSSEKVSQTPSQESEEKPVT 201
>UNIPROTKB|J9P4H8 [details] [associations]
symbol:STX18 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005484 "SNAP
receptor activity" evidence=IEA] InterPro:IPR006012 PROSITE:PS00914
GO:GO:0006886 GO:GO:0016020 GO:GO:0005622 CTD:53407 KO:K08492
InterPro:IPR019529 Pfam:PF10496 OMA:SHIMSDY
GeneTree:ENSGT00390000014853 EMBL:AAEX03002502 RefSeq:XP_851021.1
Ensembl:ENSCAFT00000044059 GeneID:609342 KEGG:cfa:609342
Uniprot:J9P4H8
Length = 336
Score = 148 (57.2 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 44/172 (25%), Positives = 81/172 (47%)
Query: 41 PRERSSFTKAALKTLESVGALEQFILNHRKDYV--------EMHRTSEQERDSIEHEVTA 92
PR + F+ A + + +G L F+L HRKDY+ E R ++ ERD I+ +
Sbjct: 44 PRPKGDFSSRAREVISHIGKLRDFLLEHRKDYINAYSHIMSEYGRMTDTERDQIDQDAQT 103
Query: 93 FIKTCKEKIDILQNSINDDEANSKGWLGLKVDRSNADTIAHKHGVVLILSEKLHSVTAQF 152
F++TC E I L+ + E +S+ +V H+ V+ + + L V +
Sbjct: 104 FMRTCSEAIQQLRTQAHK-EIHSQ-----QVKE-------HRSAVLDFIEDYLKRVCKLY 150
Query: 153 DQMRAIRFQDAINRAMPRRKLKRETVSKYADTSNPNKSDMRELDEIQPEPLT 204
+ RAIR + +++ KL+ E +K ++++ K E + +P+T
Sbjct: 151 SEQRAIRVKRVVDKKR-LSKLEPEPHTKTRESTSSEKVSQTPSQESEEKPVT 201
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.128 0.347 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 262 262 0.00091 114 3 10 22 0.48 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 609 (65 KB)
Total size of DFA: 242 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.68u 0.12s 38.80t Elapsed: 00:00:02
Total cpu time: 38.68u 0.12s 38.80t Elapsed: 00:00:02
Start: Fri May 10 04:25:36 2013 End: Fri May 10 04:25:38 2013