Your job contains 1 sequence.
>039009
MADEHKHEEPAGESVMEKITEKIHGHDSSSSSSSSDTDDDKKSSTSSLKTKVFRLFGREK
PVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF
LWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVI
AGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDA
KVLSKIPRSLKDKKKA
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039009
(256 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2128494 - symbol:BTI1 "VIRB2-interacting prote... 834 3.5e-88 2
TAIR|locus:2128238 - symbol:BTI2 "VIRB2-interacting prote... 877 8.6e-88 1
TAIR|locus:2160447 - symbol:BTI3 "VIRB2-interacting prote... 851 4.9e-85 1
TAIR|locus:2062882 - symbol:AT2G46170 species:3702 "Arabi... 817 2.0e-81 1
TAIR|locus:2082772 - symbol:AT3G61560 species:3702 "Arabi... 517 1.2e-49 1
TAIR|locus:2089663 - symbol:AT3G18260 "AT3G18260" species... 455 4.5e-43 1
TAIR|locus:2049077 - symbol:AT2G15280 "AT2G15280" species... 331 6.2e-30 1
TAIR|locus:2080315 - symbol:AT3G54120 "AT3G54120" species... 331 6.2e-30 1
TAIR|locus:1005716554 - symbol:AT3G10915 species:3702 "Ar... 276 1.2e-28 2
TAIR|locus:2046783 - symbol:RTNLB13 "AT2G23640" species:3... 200 4.7e-16 1
TAIR|locus:2090609 - symbol:AT3G19460 "AT3G19460" species... 190 5.4e-15 1
UNIPROTKB|A8MT72 - symbol:RTN1 "Reticulon-1" species:9606... 161 6.4e-12 1
UNIPROTKB|Q1LZ76 - symbol:RTN1 "Uncharacterized protein" ... 160 8.2e-12 1
UNIPROTKB|Q7YRW9 - symbol:RTN4 "Uncharacterized protein" ... 160 8.2e-12 1
UNIPROTKB|Q6IM70 - symbol:RTN4 "RTN4-C" species:9823 "Sus... 160 8.2e-12 1
UNIPROTKB|I3LBH0 - symbol:RTN1 "Uncharacterized protein" ... 159 1.0e-11 1
UNIPROTKB|F1PNX5 - symbol:RTN1 "Uncharacterized protein" ... 158 1.3e-11 1
UNIPROTKB|F1NCK0 - symbol:Gga.4205 "Uncharacterized prote... 156 2.2e-11 1
UNIPROTKB|H7C106 - symbol:RTN4 "Reticulon-4" species:9606... 150 9.4e-11 1
UNIPROTKB|F1RPY3 - symbol:RTN3 "Uncharacterized protein" ... 157 2.6e-10 1
UNIPROTKB|F8W914 - symbol:RTN4 "Reticulon-4" species:9606... 161 3.9e-10 1
ZFIN|ZDB-GENE-030710-3 - symbol:rtn1b "reticulon 1b" spec... 165 4.3e-10 1
UNIPROTKB|Q1RMR8 - symbol:RTN4 "RTN4 protein" species:991... 161 4.9e-10 1
UNIPROTKB|J9P9U4 - symbol:J9P9U4 "Uncharacterized protein... 158 6.5e-10 1
UNIPROTKB|Q08D83 - symbol:RTN3 "Reticulon-3" species:9913... 156 6.6e-10 1
UNIPROTKB|E1BP30 - symbol:E1BP30 "Uncharacterized protein... 163 7.9e-10 1
UNIPROTKB|F1P5B1 - symbol:Gga.4205 "Uncharacterized prote... 158 8.9e-10 1
UNIPROTKB|E1BUW7 - symbol:Gga.4205 "Uncharacterized prote... 158 1.1e-09 1
UNIPROTKB|I3L6J1 - symbol:RTN1 "Uncharacterized protein" ... 162 1.2e-09 1
UNIPROTKB|Q16799 - symbol:RTN1 "Reticulon-1" species:9606... 162 1.3e-09 1
UNIPROTKB|Q6IFY7 - symbol:rtn1-a "Reticulon-1-A" species:... 147 1.4e-09 1
UNIPROTKB|F1NH22 - symbol:RTN1 "Uncharacterized protein" ... 147 1.6e-09 1
UNIPROTKB|D4A1U2 - symbol:Rtn3 "Reticulon 3, isoform CRA_... 153 1.8e-09 1
ZFIN|ZDB-GENE-030710-5 - symbol:rtn3 "reticulon 3" specie... 150 2.8e-09 1
UNIPROTKB|F1Q231 - symbol:RTN1 "Uncharacterized protein" ... 158 3.9e-09 1
UNIPROTKB|F1P5B2 - symbol:Gga.4205 "Uncharacterized prote... 153 5.0e-09 1
UNIPROTKB|F5H774 - symbol:RTN3 "Reticulon-3" species:9606... 158 5.6e-09 1
UNIPROTKB|E2R925 - symbol:RTN4 "Uncharacterized protein" ... 159 5.8e-09 1
UNIPROTKB|J9P0R7 - symbol:RTN4 "Uncharacterized protein" ... 159 5.8e-09 1
UNIPROTKB|O95197 - symbol:RTN3 "Reticulon-3" species:9606... 158 6.5e-09 1
MGI|MGI:1915835 - symbol:Rtn4 "reticulon 4" species:10090... 158 7.6e-09 1
UNIPROTKB|F8WAM4 - symbol:RTN4 "Reticulon-4" species:9606... 157 8.4e-09 1
UNIPROTKB|D4AEM9 - symbol:Rtn4 "Reticulon-4" species:1011... 157 9.3e-09 1
UNIPROTKB|F1Q2B3 - symbol:RTN1 "Uncharacterized protein" ... 155 1.0e-08 1
RGD|620989 - symbol:Rtn4 "reticulon 4" species:10116 "Rat... 157 1.1e-08 1
UNIPROTKB|F1LQN3 - symbol:Rtn4 "Reticulon-4" species:1011... 157 1.1e-08 1
UNIPROTKB|Q9NQC3 - symbol:RTN4 "Reticulon-4" species:9606... 157 1.1e-08 1
UNIPROTKB|F1N405 - symbol:RTN4 "Uncharacterized protein" ... 157 1.1e-08 1
RGD|620986 - symbol:Rtn1 "reticulon 1" species:10116 "Rat... 155 1.1e-08 1
MGI|MGI:1933947 - symbol:Rtn1 "reticulon 1" species:10090... 155 1.1e-08 1
UNIPROTKB|F1NNJ7 - symbol:Gga.4205 "Uncharacterized prote... 154 1.2e-08 1
UNIPROTKB|F1PVP5 - symbol:F1PVP5 "Uncharacterized protein... 156 1.2e-08 1
UNIPROTKB|F1NH23 - symbol:RTN1 "Uncharacterized protein" ... 153 2.0e-08 1
UNIPROTKB|F1NCP4 - symbol:Gga.4205 "Uncharacterized prote... 154 2.7e-08 1
RGD|620988 - symbol:Rtn3 "reticulon 3" species:10116 "Rat... 152 3.5e-08 1
MGI|MGI:1339970 - symbol:Rtn3 "reticulon 3" species:10090... 152 3.7e-08 1
UNIPROTKB|A7MC64 - symbol:rtn1 "Reticulon-1" species:8364... 147 1.2e-07 1
ZFIN|ZDB-GENE-030710-2 - symbol:rtn4b "reticulon 4b" spec... 147 1.4e-07 1
ZFIN|ZDB-GENE-030131-2426 - symbol:rtn1a "reticulon 1a" s... 145 2.3e-07 1
ZFIN|ZDB-GENE-030710-1 - symbol:rtn4a "reticulon 4a" spec... 139 2.5e-07 1
UNIPROTKB|Q5MY90 - symbol:rtn1-b "Reticulon-1-B" species:... 144 2.6e-07 1
TAIR|locus:2057786 - symbol:3BETAHSD/D2 "3beta-hydroxyste... 132 4.9e-06 1
UNIPROTKB|K7EMR7 - symbol:RTN2 "Reticulon-2" species:9606... 119 4.3e-05 1
MGI|MGI:107612 - symbol:Rtn2 "reticulon 2 (Z-band associa... 121 7.1e-05 1
RGD|1303245 - symbol:Rtn2 "reticulon 2" species:10116 "Ra... 120 9.4e-05 1
UNIPROTKB|F1LM00 - symbol:Rtn2 "Protein Rtn2" species:101... 120 9.4e-05 1
FB|FBgn0053113 - symbol:Rtnl1 "Reticulon-like1" species:7... 121 0.00010 1
UNIPROTKB|G3X7U3 - symbol:LOC100847649 "Uncharacterized p... 97 0.00012 1
UNIPROTKB|O75298 - symbol:RTN2 "Reticulon-2" species:9606... 119 0.00015 1
TAIR|locus:2058223 - symbol:AT2G43420 species:3702 "Arabi... 119 0.00016 1
WB|WBGene00004336 - symbol:ret-1 species:6239 "Caenorhabd... 131 0.00032 2
UNIPROTKB|F6S165 - symbol:RTN2 "Uncharacterized protein" ... 114 0.00060 2
>TAIR|locus:2128494 [details] [associations]
symbol:BTI1 "VIRB2-interacting protein 1" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0071458 "integral to
cytosolic side of endoplasmic reticulum membrane" evidence=IDA]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=IDA]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161559 EMBL:AL035394 GO:GO:0071458 PANTHER:PTHR10994
GO:GO:0071786 EMBL:AY050321 EMBL:AY133635 EMBL:AY087881
IPI:IPI00517163 PIR:T05595 RefSeq:NP_194094.1 UniGene:At.25485
ProteinModelPortal:Q9SUR3 SMR:Q9SUR3 STRING:Q9SUR3 PaxDb:Q9SUR3
PRIDE:Q9SUR3 EnsemblPlants:AT4G23630.1 GeneID:828463
KEGG:ath:AT4G23630 TAIR:At4g23630 eggNOG:NOG242905
HOGENOM:HOG000237479 InParanoid:Q9SUR3 OMA:EIGHGRD PhylomeDB:Q9SUR3
ProtClustDB:CLSN2685988 Genevestigator:Q9SUR3 GO:GO:0071782
Uniprot:Q9SUR3
Length = 275
Score = 834 (298.6 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 168/263 (63%), Positives = 197/263 (74%)
Query: 1 MADEHKHEEPAGESVMEKITEKIH--GHXXXXXXXXXXXXXXXXXX-----XXXLKTKVF 53
+A E E ES+M+KI+EKIH G +K+KV+
Sbjct: 12 IAPEPAVEVVERESLMDKISEKIHHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVY 71
Query: 54 RLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLI 113
RLFGRE+PVHKVLGGGKPAD+F+W+NKK+S GVLGGATA WV+F+L+EYHLLTL+CH +I
Sbjct: 72 RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMI 131
Query: 114 VALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDL 173
V LAVLFLWSNA+ FINKSPP+IPEV+IPEEP+LQLAS LR EINR F+ LREIASGRDL
Sbjct: 132 VVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDL 191
Query: 174 KKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKK 233
KKFL IAGLWV+SI+G NFLTL YI VLL TVP+ Y+KYED+VD EKA E+KK
Sbjct: 192 KKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKK 251
Query: 234 QYAVFDAKVLSKIPRS-LKDKKK 255
QYAV D KVLSKIP LK+KKK
Sbjct: 252 QYAVLDEKVLSKIPLGPLKNKKK 274
Score = 66 (28.3 bits), Expect = 3.5e-88, Sum P(2) = 3.5e-88
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 1 MADEHKHEE------PA-----GESVMEKITEKIH 24
MA+EHKH+E PA ES+M+KI+EKIH
Sbjct: 1 MAEEHKHDESVIAPEPAVEVVERESLMDKISEKIH 35
>TAIR|locus:2128238 [details] [associations]
symbol:BTI2 "VIRB2-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IDA] [GO:0071458
"integral to cytosolic side of endoplasmic reticulum membrane"
evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IMP] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0010286 "heat acclimation" evidence=RCA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005886
GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL096882
EMBL:AL161531 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 ProtClustDB:CLSN2685988
GO:GO:0071782 EMBL:AY034901 EMBL:AY048273 EMBL:AY057606
EMBL:BT002368 EMBL:AY086294 IPI:IPI00525362 PIR:T13013
RefSeq:NP_192861.1 UniGene:At.3649 ProteinModelPortal:Q9SUT9
SMR:Q9SUT9 IntAct:Q9SUT9 STRING:Q9SUT9 PaxDb:Q9SUT9 PRIDE:Q9SUT9
EnsemblPlants:AT4G11220.1 GeneID:826724 KEGG:ath:AT4G11220
TAIR:At4g11220 InParanoid:Q9SUT9 OMA:FANLRQI PhylomeDB:Q9SUT9
Genevestigator:Q9SUT9 Uniprot:Q9SUT9
Length = 271
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 177/270 (65%), Positives = 207/270 (76%)
Query: 1 MADEHKHEE------PA-----GESVMEKITEKIH--GHXXXXXXXXXXXXXXXXXXX-X 46
MADEHKHEE PA ES+MEK++EKIH G
Sbjct: 1 MADEHKHEESSPNLDPAVEVVERESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPK 60
Query: 47 XLKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLT 106
LK+KV+RLFGRE+PVHKVLGGGKPAD+F+W++KK+S GV GGAT WVLF+L+EYHLLT
Sbjct: 61 SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLT 120
Query: 107 LVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLRE 166
L+CH +IVALAVLFLWSNA+ FI+KSPP+IPEV+IPEEP+LQLAS LR EINR + LRE
Sbjct: 121 LLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLRE 180
Query: 167 IASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEK 226
IASGRD+KKFLS IAGLWV+SI+G +FLTL YI VLL TVP+ Y+KYED+VDS+ EK
Sbjct: 181 IASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEK 240
Query: 227 AWAEIKKQYAVFDAKVLSKIPRS-LKDKKK 255
A AE+KKQYAV DAKV SKIPR LKDKKK
Sbjct: 241 AMAELKKQYAVLDAKVFSKIPRGPLKDKKK 270
>TAIR|locus:2160447 [details] [associations]
symbol:BTI3 "VIRB2-interacting protein 3" species:3702
"Arabidopsis thaliana" [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IDA]
[GO:0071458 "integral to cytosolic side of endoplasmic reticulum
membrane" evidence=IDA] [GO:0071782 "endoplasmic reticulum tubular
network" evidence=IDA] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=IMP] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005886 GO:GO:0009506 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005233 GO:GO:0071458 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG303514 HOGENOM:HOG000237479 GO:GO:0071782 EMBL:AY035169
EMBL:AY057638 EMBL:AY150449 IPI:IPI00523388 RefSeq:NP_198975.1
UniGene:At.8344 ProteinModelPortal:Q9FFS0 IntAct:Q9FFS0
STRING:Q9FFS0 PaxDb:Q9FFS0 PRIDE:Q9FFS0 EnsemblPlants:AT5G41600.1
GeneID:834162 KEGG:ath:AT5G41600 TAIR:At5g41600 InParanoid:Q9FFS0
OMA:VMWLLTY PhylomeDB:Q9FFS0 ProtClustDB:CLSN2682625
Genevestigator:Q9FFS0 Uniprot:Q9FFS0
Length = 257
Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 166/260 (63%), Positives = 192/260 (73%)
Query: 1 MADEHKHEEPAGESVMEKITEKIHGHXXXXXXXXXXXXX-XXXXXXXXLKTKVFRLFGRE 59
M ++HKHEE S++EKI EKIHGH K+K++RLFGRE
Sbjct: 1 MVEDHKHEE----SILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGRE 56
Query: 60 KPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVL 119
KPVHKVLGGGKPAD+FLWRNKK+S GVLG TA WVLF+L EYHLL +CH I ALA L
Sbjct: 57 KPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAAL 116
Query: 120 FLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
FLWSNA TFI+KS P IPEV+IPE+P+LQL S LR EINR TLLR IASG+D+KKF+ V
Sbjct: 117 FLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILV 176
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
IAGLWV+SI+GS NFLTLFY VLL T+PV+YEKYED+VD++ EKA EIKKQYAV D
Sbjct: 177 IAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLD 236
Query: 240 AKVL----SKIPRSLKDKKK 255
KVL SKIPR +KKK
Sbjct: 237 EKVLRKVISKIPRGALNKKK 256
>TAIR|locus:2062882 [details] [associations]
symbol:AT2G46170 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS;IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0080167 "response
to karrikin" evidence=IEP] [GO:0006007 "glucose catabolic process"
evidence=RCA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005789 GO:GO:0080167 EMBL:AC005397
PANTHER:PTHR10994 eggNOG:NOG303514 HOGENOM:HOG000237479
EMBL:AY053421 EMBL:AY074836 IPI:IPI00521101 PIR:E84899
RefSeq:NP_566065.1 UniGene:At.13080 ProteinModelPortal:O82352
SMR:O82352 PaxDb:O82352 PRIDE:O82352 EnsemblPlants:AT2G46170.1
GeneID:819224 KEGG:ath:AT2G46170 TAIR:At2g46170 InParanoid:O82352
OMA:RPLICSI PhylomeDB:O82352 ProtClustDB:CLSN2688961
Genevestigator:O82352 Uniprot:O82352
Length = 255
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 157/256 (61%), Positives = 195/256 (76%)
Query: 1 MADEHKHEEPAGESVMEKITEKIHGHXXXXXXXXXXXXXXXXXXXXXLKTKVFRLFGREK 60
MA+E + P ES+MEKI+EKIH H +K K++R+FGREK
Sbjct: 1 MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSA---VKAKIYRMFGREK 57
Query: 61 PVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF 120
PVHKVLGGGKPADVFLWR+KK+S VLG ATAIWVLF+L+EYHLL+L+CH I+AL LF
Sbjct: 58 PVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLF 117
Query: 121 LWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVI 180
LWSNA T INK+ P+IPE+++PEE L +AS+LR E+N+AF +LR IA GRDLKKFL V+
Sbjct: 118 LWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVV 177
Query: 181 AGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDA 240
GLW++S+VG+W NFLTL YI FV+LHTVP++YEK+ED+VD +EKA E++KQY VFD
Sbjct: 178 VGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDE 237
Query: 241 KVLSKIP-RSLKDKKK 255
KVLSKIP SLK K K
Sbjct: 238 KVLSKIPIASLKAKAK 253
>TAIR|locus:2082772 [details] [associations]
symbol:AT3G61560 species:3702 "Arabidopsis thaliana"
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0005886 GO:GO:0009506 EMBL:CP002686 PANTHER:PTHR10994
IPI:IPI00540028 RefSeq:NP_001030913.1 UniGene:At.34268 PRIDE:F4JFD4
EnsemblPlants:AT3G61560.2 GeneID:825329 KEGG:ath:AT3G61560
Uniprot:F4JFD4
Length = 264
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 125/267 (46%), Positives = 155/267 (58%)
Query: 1 MADEHKHEEPAGESVMEKITEKIHGHXXXXXXXXXXXXXXXXXXXXXLKTKVFRLFGREK 60
MA+E + ES+MEKI +KIH H LK K++RLFGREK
Sbjct: 1 MAEELEKSMHKEESLMEKIADKIHDHDSSSSSDSEHEKPESPSA---LKAKIYRLFGREK 57
Query: 61 PVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF 120
PVHKVLGGG PADVFLWR+KK+SA VLG ATAIWVLF+L+EYH L+LVCH LI ALA LF
Sbjct: 58 PVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALF 117
Query: 121 LWSNASTFINKSP-P--------RI-PEV-YIPEEPVLQLASALRFE-INRAFTLLREIA 168
L SNA F+NK P R P + Y E + + + E I + +
Sbjct: 118 LLSNAHAFMNKGTFPYDCFCTEKRAEPGLCYFKEHCLRKGLEEISHELIQSTYETFSIMG 177
Query: 169 SGRDLKKFLSVIAGLWVVSIVGSWCNFLT-LFYIVFVLLHTVPVIYEKYEDRVDSFSEKA 227
++ + G W V +G C L L FV+LHTVP++YEK+ED+VD +EK
Sbjct: 178 FVTRTSIYIGISGGFWAVDNLG--CGKLVQLLDSCFVVLHTVPMLYEKHEDKVDPVAEKT 235
Query: 228 WAEIKKQYAVFDAKVLSKIP-RSLKDK 253
E+KK Y VFD KVLSK+P SLK K
Sbjct: 236 LKELKKHYMVFDEKVLSKLPVASLKAK 262
>TAIR|locus:2089663 [details] [associations]
symbol:AT3G18260 "AT3G18260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005789
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:AP000414 EMBL:BT024845
EMBL:AY087239 IPI:IPI00546437 RefSeq:NP_566604.1 UniGene:At.38585
ProteinModelPortal:Q9LJQ5 PRIDE:Q9LJQ5 EnsemblPlants:AT3G18260.1
GeneID:821354 KEGG:ath:AT3G18260 TAIR:At3g18260 eggNOG:NOG309784
InParanoid:Q9LJQ5 OMA:CSFTTLL PhylomeDB:Q9LJQ5
ProtClustDB:CLSN2688524 Genevestigator:Q9LJQ5 Uniprot:Q9LJQ5
Length = 225
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 86/205 (41%), Positives = 130/205 (63%)
Query: 51 KVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCH 110
K +LF R++ +H + GGGK AD+ LWR KI+A ++ G + +W L +++EY+ +TL+CH
Sbjct: 19 KTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICH 78
Query: 111 CLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASG 170
+ ++ F+WS AS F+N P IPEV + E QLA + N+ T L ++A G
Sbjct: 79 ASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACG 138
Query: 171 RDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAE 230
RD F L++VSI+G++ NF+ L +I FV + T+PV+YE YED VD+ + K +
Sbjct: 139 RDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRK 198
Query: 231 IKKQYAVFDAKVLSKIPR-SLKDKK 254
+KK Y D VLSKIPR ++K+KK
Sbjct: 199 MKKLYKKVDTNVLSKIPRGTVKNKK 223
>TAIR|locus:2049077 [details] [associations]
symbol:AT2G15280 "AT2G15280" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005789 EMBL:AC007267
PANTHER:PTHR10994 HOGENOM:HOG000237479 EMBL:BX821446 EMBL:BT010716
EMBL:BT010986 IPI:IPI00533223 IPI:IPI00548624 PIR:A84527
RefSeq:NP_179130.2 RefSeq:NP_973467.1 UniGene:At.22376
UniGene:At.40435 ProteinModelPortal:Q6NPD8
EnsemblPlants:AT2G15280.1 GeneID:816017 KEGG:ath:AT2G15280
TAIR:At2g15280 eggNOG:NOG300173 InParanoid:Q6NPD8 OMA:VAREIYV
PhylomeDB:Q6NPD8 ProtClustDB:CLSN2690715 Genevestigator:Q6NPD8
Uniprot:Q6NPD8
Length = 201
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 65/188 (34%), Positives = 106/188 (56%)
Query: 59 EKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAV 118
E+ VH+ + G AD+ +W+N++ +LG T +W LF+ Y V + ++++ +
Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVI 61
Query: 119 LFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLS 178
LFLW+ ++ N+ P++P + I EE V +A A+R IN + REI GR+ K+
Sbjct: 62 LFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFR 121
Query: 179 VIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVF 238
V LW VS VG++ NFLT+ Y+ VL +P +YE+Y+D +D I+ QY
Sbjct: 122 VSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKI 181
Query: 239 DAKVLSKI 246
D ++L KI
Sbjct: 182 DERLLQKI 189
>TAIR|locus:2080315 [details] [associations]
symbol:AT3G54120 "AT3G54120" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005789 EMBL:AL132957
PANTHER:PTHR10994 UniGene:At.25009 UniGene:At.68442
HOGENOM:HOG000237479 EMBL:BT010698 EMBL:BT010978 EMBL:AK229371
IPI:IPI00519528 PIR:T47571 RefSeq:NP_190980.1
ProteinModelPortal:Q9M392 IntAct:Q9M392 EnsemblPlants:AT3G54120.1
GeneID:824579 KEGG:ath:AT3G54120 TAIR:At3g54120 eggNOG:NOG256441
InParanoid:Q9M392 OMA:LWAKAAR PhylomeDB:Q9M392
ProtClustDB:CLSN2685077 Genevestigator:Q9M392 Uniprot:Q9M392
Length = 203
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 59/167 (35%), Positives = 103/167 (61%)
Query: 54 RLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLI 113
+LF R++ +H++LGGG ADV LWR K +S G++ A W++F+ Y + TL+ L+
Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLL 66
Query: 114 VALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDL 173
+ L++LFLWS +++ +N+ P +PE I E + + LR +N+ + +IA RD
Sbjct: 67 LLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDS 126
Query: 174 KKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRV 220
+ + V L+++S++GS +F TL + +++ TVP YE+YED +
Sbjct: 127 ELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
>TAIR|locus:1005716554 [details] [associations]
symbol:AT3G10915 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 EMBL:CP002686 PANTHER:PTHR10994 IPI:IPI00938902
RefSeq:NP_001154603.1 UniGene:At.44168 ProteinModelPortal:F4J500
EnsemblPlants:AT3G10915.5 GeneID:820262 KEGG:ath:AT3G10915
OMA:HDITLGK Uniprot:F4J500
Length = 249
Score = 276 (102.2 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 55/184 (29%), Positives = 99/184 (53%)
Query: 72 ADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINK 131
AD+ LWR + +S GV+ +T W++F+ L++ L++ + + F+ + S F N+
Sbjct: 64 ADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNR 123
Query: 132 SPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLS-VIAGLWVVSIVG 190
+PE+ + EE V A++ R ++N + ++ G D + F V+ LW++S +G
Sbjct: 124 QLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIG 183
Query: 191 SWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPRSL 250
S+ + TL YI +L T+P +Y KY+ +VD + Y + D V+S++ SL
Sbjct: 184 SYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSL 243
Query: 251 -KDK 253
KDK
Sbjct: 244 SKDK 247
Score = 58 (25.5 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 53 FRLFGREKPVHKVLGGGK 70
+RL GR+ VH+ +GGGK
Sbjct: 23 YRLLGRQITVHQFMGGGK 40
>TAIR|locus:2046783 [details] [associations]
symbol:RTNLB13 "AT2G23640" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0005783 "endoplasmic reticulum"
evidence=IEA;ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0071458 "integral to cytosolic side of
endoplasmic reticulum membrane" evidence=IDA] [GO:0071782
"endoplasmic reticulum tubular network" evidence=IDA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=IMP]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 EMBL:AC003040
EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC004482 GO:GO:0071458
PANTHER:PTHR10994 GO:GO:0071786 GO:GO:0071782 EMBL:BX822075
IPI:IPI00527827 PIR:T01153 RefSeq:NP_565555.1 UniGene:At.50091
ProteinModelPortal:O64837 STRING:O64837 PaxDb:O64837 PRIDE:O64837
EnsemblPlants:AT2G23640.1 GeneID:816896 KEGG:ath:AT2G23640
TAIR:At2g23640 eggNOG:NOG307342 HOGENOM:HOG000154223
InParanoid:O64837 OMA:WMFRVGA PhylomeDB:O64837
ProtClustDB:CLSN2688372 Genevestigator:O64837 Uniprot:O64837
Length = 206
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 44/186 (23%), Positives = 91/186 (48%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKS 132
D++LWR KK++ L +T+ W+L + +T+V I ++++FLW + ++K
Sbjct: 18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKV 77
Query: 133 PPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSW 192
P + + + EE V++ + R + + + + + F + G W++S +G+
Sbjct: 78 EPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNL 137
Query: 193 CNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVL---SKIPRS 249
+F T +I V+ TVP ++E+Y D++ + K Y K+L +K+
Sbjct: 138 LDFHTCLFIGLVMGLTVPKLWEEYGDQIQKHLGSLKDKSKGAYNTTHEKILEMKNKLHHG 197
Query: 250 LKDKKK 255
++K K
Sbjct: 198 TEEKVK 203
>TAIR|locus:2090609 [details] [associations]
symbol:AT3G19460 "AT3G19460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IEA;ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005783 EMBL:CP002686 EMBL:AB025624
PANTHER:PTHR10994 HOGENOM:HOG000237479 IPI:IPI00846973
RefSeq:NP_001078186.1 UniGene:At.38403 ProteinModelPortal:A8MR23
PRIDE:A8MR23 EnsemblPlants:AT3G19460.2 GeneID:821480
KEGG:ath:AT3G19460 OMA:RHINTIV ProtClustDB:CLSN2688563
Genevestigator:A8MR23 Uniprot:A8MR23
Length = 218
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 44/137 (32%), Positives = 76/137 (55%)
Query: 72 ADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINK 131
AD+ LWRN+ + +L +T W LF+ Y+LL+ V + L++ +A+ FLW+ ++T +N+
Sbjct: 7 ADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNR 66
Query: 132 SPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG-LWVVSIVG 190
P +P + IPEE + A LR IN ++ +I R+ + L V LW
Sbjct: 67 PLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVFFHHLWQTIC-- 124
Query: 191 SWCNFLTLFYIVFVLLH 207
C FL L +++++ +H
Sbjct: 125 --CIFLFL-HVMYLTVH 138
Score = 108 (43.1 bits), Expect = 0.00050, P = 0.00050
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
LW +S VG+ N LTL YI +L + P++YEKY+D +D EK + K F +
Sbjct: 152 LWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID---EKVNSTSK-----FVRNI 203
Query: 243 LSKIPRSLKDKKK 255
K P + +KK
Sbjct: 204 SRKFPLPINKEKK 216
>UNIPROTKB|A8MT72 [details] [associations]
symbol:RTN1 "Reticulon-1" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 HGNC:HGNC:10467 ChiTaRS:RTN1
HOGENOM:HOG000015254 EMBL:AL121694 EMBL:AL133299 EMBL:AL139194
IPI:IPI00794113 ProteinModelPortal:A8MT72 SMR:A8MT72 STRING:A8MT72
PRIDE:A8MT72 Ensembl:ENST00000395090 UCSC:uc010apl.2
ArrayExpress:A8MT72 Bgee:A8MT72 Uniprot:A8MT72
Length = 193
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 49/188 (26%), Positives = 96/188 (51%)
Query: 71 PA-DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--VLF-LWSNAS 126
PA D+ WR+ K G++ G+ + +LF L ++ ++++V + + AL+ + F ++ +
Sbjct: 5 PAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 62
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
+ K+ P E+ + +E + + L+F +N LR + +DL L
Sbjct: 63 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 122
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+W+++ VG+ N LTL + V + T+PV+Y K++ ++D + I AV
Sbjct: 123 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHIN---AVV- 178
Query: 240 AKVLSKIP 247
AK+ +KIP
Sbjct: 179 AKIQAKIP 186
>UNIPROTKB|Q1LZ76 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:DAAA02029288
EMBL:DAAA02029289 EMBL:BC116162 IPI:IPI00904153 UniGene:Bt.22982
SMR:Q1LZ76 STRING:Q1LZ76 Ensembl:ENSBTAT00000015218
NextBio:20875732 Uniprot:Q1LZ76
Length = 208
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 47/185 (25%), Positives = 94/185 (50%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--VLF-LWSNASTFI 129
D+ WR+ K G++ G+ + +LF L ++ ++++V + + AL+ + F ++ + +
Sbjct: 23 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 80
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
K+ P E+ + +E + + L+F +N LR + +DL L
Sbjct: 81 QKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 140
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N LTL + V + T+PV+Y K++ ++D + I AV AK+
Sbjct: 141 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHIN---AVV-AKI 196
Query: 243 LSKIP 247
+KIP
Sbjct: 197 QAKIP 201
>UNIPROTKB|Q7YRW9 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 EMBL:DAAA02030906 EMBL:DAAA02030907
UniGene:Bt.105155 GeneID:359718 KEGG:bta:359718 NextBio:20812748
EMBL:BC116111 EMBL:AY164744 IPI:IPI00718559 RefSeq:NP_001068606.1
SMR:Q7YRW9 STRING:Q7YRW9 Ensembl:ENSBTAT00000014744 Uniprot:Q7YRW9
Length = 199
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 55/194 (28%), Positives = 93/194 (47%)
Query: 70 KPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNAS 126
K D+ WR+ K GV+ GA+ +++L L + ++++ + + L+V ++
Sbjct: 11 KVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 68
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
I KS P EV I EE V + +++ +N LR + DL L
Sbjct: 69 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKF 128
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+WV + VG+ N LTL + + L +VPVIYE+++ ++D + A +K A
Sbjct: 129 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMA--- 185
Query: 240 AKVLSKIPRSLKDK 253
K+ +KIP LK K
Sbjct: 186 -KIQAKIP-GLKRK 197
>UNIPROTKB|Q6IM70 [details] [associations]
symbol:RTN4 "RTN4-C" species:9823 "Sus scrofa" [GO:0005783
"endoplasmic reticulum" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG000838 eggNOG:NOG306139 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 OMA:NWKCQAI EMBL:CU929931
EMBL:CU928339 EMBL:BK001795 RefSeq:NP_001123435.1 UniGene:Ssc.94392
SMR:Q6IM70 STRING:Q6IM70 Ensembl:ENSSSCT00000009205
GeneID:100170118 KEGG:ssc:100170118 Uniprot:Q6IM70
Length = 199
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 55/194 (28%), Positives = 93/194 (47%)
Query: 70 KPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNAS 126
K D+ WR+ K GV+ GA+ +++L L + ++++ + + L+V ++
Sbjct: 11 KVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 68
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
I KS P EV I EE V + +++ +N LR + DL L
Sbjct: 69 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKF 128
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+WV + VG+ N LTL + + L +VPVIYE+++ ++D + A +K A
Sbjct: 129 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMA--- 185
Query: 240 AKVLSKIPRSLKDK 253
K+ +KIP LK K
Sbjct: 186 -KIQAKIP-GLKRK 197
>UNIPROTKB|I3LBH0 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 CTD:6252 GeneTree:ENSGT00390000009934
EMBL:CU469078 EMBL:FP340567 UniGene:Ssc.13916 GeneID:100152394
KEGG:ssc:100152394 RefSeq:NP_001231570.1 RefSeq:XP_003480527.1
ProteinModelPortal:I3LBH0 SMR:I3LBH0 Ensembl:ENSSSCT00000032115
Uniprot:I3LBH0
Length = 208
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 47/185 (25%), Positives = 94/185 (50%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--VLF-LWSNASTFI 129
D+ WR+ K G++ G+ + +LF L ++ ++++V + + AL+ + F ++ + +
Sbjct: 23 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 80
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
K+ P E+ + +E + + L+F +N LR + +DL L
Sbjct: 81 QKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVL 140
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N LTL + V + T+PV+Y K++ ++D + I AV AK+
Sbjct: 141 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHIN---AVV-AKI 196
Query: 243 LSKIP 247
+KIP
Sbjct: 197 QAKIP 201
>UNIPROTKB|F1PNX5 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:DPKKSGI
EMBL:AAEX03005762 Ensembl:ENSCAFT00000024693 Uniprot:F1PNX5
Length = 208
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 43/180 (23%), Positives = 89/180 (49%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--VLF-LWSNASTFI 129
D+ WR+ K G++ G+ + +LF L ++ ++++V + + AL+ + F ++ + +
Sbjct: 23 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 80
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
K+ P E+ + +E + + L+F +N LR + +DL L
Sbjct: 81 QKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 140
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N LTL + V + T+PV+Y K++ ++D + I A AK+
Sbjct: 141 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINTVVAKIQAKI 200
>UNIPROTKB|F1NCK0 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00820463 Ensembl:ENSGALT00000013195 ArrayExpress:F1NCK0
Uniprot:F1NCK0
Length = 199
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 53/194 (27%), Positives = 92/194 (47%)
Query: 70 KPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNAS 126
K D+ WR+ K GV+ GA+ +++L L + ++++ + + L+V ++
Sbjct: 11 KVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 68
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
I KS P +V + EE + + +S + IN LR + DL L
Sbjct: 69 QAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKF 128
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+WV + VG+ N LTL + + L +VPVIYE+++ ++D + +K A
Sbjct: 129 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMA--- 185
Query: 240 AKVLSKIPRSLKDK 253
K+ +KIP LK K
Sbjct: 186 -KIQAKIP-GLKRK 197
>UNIPROTKB|H7C106 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 ProteinModelPortal:H7C106 PRIDE:H7C106
Ensembl:ENST00000438462 OMA:NWKCQAI Uniprot:H7C106
Length = 203
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 55/200 (27%), Positives = 93/200 (46%)
Query: 54 RLFGREKPVH---KVLGGGKP----ADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLT 106
R GR +PV + G G P D+ WR+ K GV+ GA+ +++L L + +++
Sbjct: 5 RTSGRWRPVWLEARGEGWGGPWSPVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVS 62
Query: 107 LVCHCLIVALAVLF---LWSNASTFINKSPPRIP-------EVYIPEEPVLQLASALRFE 156
+ + + L+V ++ I KS P EV I EE V + +++
Sbjct: 63 VTAYIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGH 122
Query: 157 INRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKY 216
+N LR + DL L +WV + VG+ N LTL + + L +VPVIYE++
Sbjct: 123 VNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERH 182
Query: 217 EDRVDSFSEKAWAEIKKQYA 236
+ ++D + A +K A
Sbjct: 183 QAQIDHYLGLANKNVKDAMA 202
>UNIPROTKB|F1RPY3 [details] [associations]
symbol:RTN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 OMA:VMWLLTY EMBL:FP089542
EMBL:AEMK01195949 Ensembl:ENSSSCT00000014266 Uniprot:F1RPY3
Length = 236
Score = 157 (60.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 47/191 (24%), Positives = 94/191 (49%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K G + G T I +L L + ++++V + ++ L+V ++ + +
Sbjct: 50 DLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 107
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P ++ + E +A IN+A L+ + DL L +
Sbjct: 108 QKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINKALKLIIRLFLVEDLVDSLKLAVF 167
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N +TL + +L+ +VPV+YEKY+ ++D + A + K ++ + K+
Sbjct: 168 MWLMTYVGAVFNGITLLILAELLIFSVPVVYEKYKTQIDHYVGIARDQTK---SIVE-KI 223
Query: 243 LSKIPRSLKDK 253
+K+P K K
Sbjct: 224 QAKVPGIAKKK 234
>UNIPROTKB|F8W914 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 IPI:IPI01011809
ProteinModelPortal:F8W914 SMR:F8W914 Ensembl:ENST00000402434
ArrayExpress:F8W914 Bgee:F8W914 Uniprot:F8W914
Length = 345
Score = 161 (61.7 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 56/203 (27%), Positives = 95/203 (46%)
Query: 61 PVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF 120
P + G D+ WR+ K GV+ GA+ +++L L + ++++ + + L+V
Sbjct: 148 PKRRGSSGSVVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTI 205
Query: 121 ---LWSNASTFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASG 170
++ I KS P EV I EE V + +++ +N LR +
Sbjct: 206 SFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLV 265
Query: 171 RDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAE 230
DL L +WV + VG+ N LTL + + L +VPVIYE+++ ++D + A
Sbjct: 266 DDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKN 325
Query: 231 IKKQYAVFDAKVLSKIPRSLKDK 253
+K A K+ +KIP LK K
Sbjct: 326 VKDAMA----KIQAKIP-GLKRK 343
>ZFIN|ZDB-GENE-030710-3 [details] [associations]
symbol:rtn1b "reticulon 1b" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-3 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG008971 HOGENOM:HOG000134444 EMBL:AY555034
IPI:IPI00650731 UniGene:Dr.673 ProteinModelPortal:Q4G5W7 SMR:Q4G5W7
PRIDE:Q4G5W7 InParanoid:Q4G5W7 ArrayExpress:Q4G5W7 Bgee:Q4G5W7
Uniprot:Q4G5W7
Length = 767
Score = 165 (63.1 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 53/197 (26%), Positives = 103/197 (52%)
Query: 70 KPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--VLF-LWSNAS 126
K ++ WR+ K S V G + + +LF L ++ ++++V + + +L+ + F ++ +
Sbjct: 579 KAMELLYWRDLKKSGLVFG--SLLLMLFSLTQFSVVSVVAYLALASLSATISFRVYKSVL 636
Query: 127 TFINKSPPRIP-EVYIPEEPVL---QL---ASALRFEINRAFTLLREIASGRDLKKFLSV 179
+ K+ P +VY+ E L Q+ A +++ IN LR + +DL L
Sbjct: 637 QAVQKTDEGHPFKVYLDVEMSLSHDQMQKYAENVQYYINSTLKELRRLFLVQDLVDSLKF 696
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+W+++ VG+ N LTL +V V + ++PV+YEKY+ ++D + + I+ Q
Sbjct: 697 AVLMWLLTYVGALFNGLTLLIMVVVCMFSMPVVYEKYQAQIDQYVDL----IRTQVNSVV 752
Query: 240 AKVLSKIPRSLKDKKKA 256
AK+ K+P + K+KA
Sbjct: 753 AKIQEKVPGT---KRKA 766
>UNIPROTKB|Q1RMR8 [details] [associations]
symbol:RTN4 "RTN4 protein" species:9913 "Bos taurus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 CTD:57142 EMBL:DAAA02030906 EMBL:DAAA02030907
EMBL:BC114748 IPI:IPI00730691 RefSeq:NP_001106692.1
UniGene:Bt.105155 SMR:Q1RMR8 STRING:Q1RMR8
Ensembl:ENSBTAT00000036144 GeneID:359718 KEGG:bta:359718
NextBio:20812748 Uniprot:Q1RMR8
Length = 379
Score = 161 (61.7 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 56/203 (27%), Positives = 95/203 (46%)
Query: 61 PVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF 120
P + G D+ WR+ K GV+ GA+ +++L L + ++++ + + L+V
Sbjct: 182 PKRRGSSGSVVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTI 239
Query: 121 ---LWSNASTFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASG 170
++ I KS P EV I EE V + +++ +N LR +
Sbjct: 240 SFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLV 299
Query: 171 RDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAE 230
DL L +WV + VG+ N LTL + + L +VPVIYE+++ ++D + A
Sbjct: 300 DDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKN 359
Query: 231 IKKQYAVFDAKVLSKIPRSLKDK 253
+K A K+ +KIP LK K
Sbjct: 360 VKDAMA----KIQAKIP-GLKRK 377
>UNIPROTKB|J9P9U4 [details] [associations]
symbol:J9P9U4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:IICPYNI
EMBL:AAEX03011658 EMBL:AAEX03011657 Ensembl:ENSCAFT00000043047
Uniprot:J9P9U4
Length = 296
Score = 158 (60.7 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 47/191 (24%), Positives = 94/191 (49%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K G + G T I +L L + ++++V + ++ L+V ++ + +
Sbjct: 110 DLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 167
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P ++ + E +A INRA L+ + DL L +
Sbjct: 168 QKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 227
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N +TL + +L+ +VP++YEKY+ ++D + A + K ++ + K+
Sbjct: 228 MWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTK---SIVE-KI 283
Query: 243 LSKIPRSLKDK 253
+K+P K K
Sbjct: 284 QAKLPGIAKKK 294
>UNIPROTKB|Q08D83 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9913 "Bos taurus"
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 HOVERGEN:HBG000838
HOGENOM:HOG000015254 EMBL:BT030534 EMBL:BC123892 EMBL:BC149634
EMBL:BK001797 IPI:IPI00687234 IPI:IPI00837997 RefSeq:NP_872598.1
UniGene:Bt.16079 ProteinModelPortal:Q08D83 SMR:Q08D83 PRIDE:Q08D83
GeneID:359721 KEGG:bta:359721 CTD:10313 eggNOG:NOG303514
InParanoid:Q08D83 OrthoDB:EOG4229M0 NextBio:20812750 Uniprot:Q08D83
Length = 256
Score = 156 (60.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 46/191 (24%), Positives = 94/191 (49%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K G + G T I +L L + ++++V + ++ L+V ++ + +
Sbjct: 70 DLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 127
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P ++ + E +A INRA L+ + DL L +
Sbjct: 128 QKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 187
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N +TL + +L+ ++P++YEKY+ ++D + A + K ++ + K+
Sbjct: 188 MWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIARDQTK---SIVE-KI 243
Query: 243 LSKIPRSLKDK 253
+K+P K K
Sbjct: 244 QAKLPGIAKKK 254
>UNIPROTKB|E1BP30 [details] [associations]
symbol:E1BP30 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0030182 PANTHER:PTHR10994 OMA:PFLNKQK
GeneTree:ENSGT00390000009934 EMBL:DAAA02029288 EMBL:DAAA02029289
IPI:IPI00924046 Ensembl:ENSBTAT00000061568 ArrayExpress:E1BP30
Uniprot:E1BP30
Length = 697
Score = 163 (62.4 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 48/188 (25%), Positives = 95/188 (50%)
Query: 70 KPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--VLF-LWSNAS 126
K D+ WR+ K G++ G+ + +LF L ++ ++++V + + AL+ + F ++ +
Sbjct: 509 KAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 566
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
+ K+ P E+ + +E + + L+F +N LR + +DL L
Sbjct: 567 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKF 626
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+W+++ VG+ N LTL + V + T+PV+Y K++ ++D + I AV
Sbjct: 627 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHIN---AVV- 682
Query: 240 AKVLSKIP 247
AK+ +KIP
Sbjct: 683 AKIQAKIP 690
>UNIPROTKB|F1P5B1 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00823248 Ensembl:ENSGALT00000040235 ArrayExpress:F1P5B1
Uniprot:F1P5B1
Length = 326
Score = 158 (60.7 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 55/205 (26%), Positives = 96/205 (46%)
Query: 60 KPVHKVLGGGKPA-DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAV 118
+P +V G D+ WR+ K GV+ GA+ +++L L + ++++ + + L+V
Sbjct: 127 EPRRRVSSSGSAVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSV 184
Query: 119 LF---LWSNASTFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIA 168
++ I KS P +V + EE + + +S + IN LR +
Sbjct: 185 TISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLF 244
Query: 169 SGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAW 228
DL L +WV + VG+ N LTL + + L +VPVIYE+++ ++D +
Sbjct: 245 LVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVN 304
Query: 229 AEIKKQYAVFDAKVLSKIPRSLKDK 253
+K A K+ +KIP LK K
Sbjct: 305 KNVKDAMA----KIQAKIP-GLKRK 324
>UNIPROTKB|E1BUW7 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00821143 Ensembl:ENSGALT00000040236 ArrayExpress:E1BUW7
Uniprot:E1BUW7
Length = 347
Score = 158 (60.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 57/213 (26%), Positives = 99/213 (46%)
Query: 52 VFRLFGREKPV-HKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCH 110
+F L +P+ H G D+ WR+ K GV+ GA+ +++L L + ++++ +
Sbjct: 142 LFALPATSEPLMHS--SAGNIVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAY 197
Query: 111 CLIVALAVLF---LWSNASTFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRA 160
+ L+V ++ I KS P +V + EE + + +S + IN
Sbjct: 198 IALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGT 257
Query: 161 FTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRV 220
LR + DL L +WV + VG+ N LTL + + L +VPVIYE+++ ++
Sbjct: 258 VKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQI 317
Query: 221 DSFSEKAWAEIKKQYAVFDAKVLSKIPRSLKDK 253
D + +K A K+ +KIP LK K
Sbjct: 318 DHYLGLVNKNVKDAMA----KIQAKIP-GLKRK 345
>UNIPROTKB|I3L6J1 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030182 "neuron differentiation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GO:GO:0030182 PANTHER:PTHR10994 CTD:6252 OMA:PFLNKQK
GeneTree:ENSGT00390000009934 EMBL:CU469078 EMBL:FP340567
RefSeq:NP_001231569.1 RefSeq:XP_003480528.1 UniGene:Ssc.13916
Ensembl:ENSSSCT00000022854 GeneID:100152394 KEGG:ssc:100152394
Uniprot:I3L6J1
Length = 770
Score = 162 (62.1 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 48/188 (25%), Positives = 95/188 (50%)
Query: 70 KPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--VLF-LWSNAS 126
K D+ WR+ K G++ G+ + +LF L ++ ++++V + + AL+ + F ++ +
Sbjct: 582 KAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 639
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
+ K+ P E+ + +E + + L+F +N LR + +DL L
Sbjct: 640 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 699
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+W+++ VG+ N LTL + V + T+PV+Y K++ ++D + I AV
Sbjct: 700 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHIN---AVV- 755
Query: 240 AKVLSKIP 247
AK+ +KIP
Sbjct: 756 AKIQAKIP 763
>UNIPROTKB|Q16799 [details] [associations]
symbol:RTN1 "Reticulon-1" species:9606 "Homo sapiens"
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=TAS] [GO:0007165 "signal transduction" evidence=NAS]
[GO:0004871 "signal transducer activity" evidence=NAS] [GO:0030182
"neuron differentiation" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 EMBL:CH471061 GO:GO:0030182 GO:GO:0004871
GO:GO:0030176 PANTHER:PTHR10994 HOVERGEN:HBG008971 EMBL:L10333
EMBL:L10334 EMBL:L10335 EMBL:BC090862 EMBL:BC000314 EMBL:BC003003
IPI:IPI00003971 IPI:IPI00219812 IPI:IPI00219813 PIR:A46583
PIR:I60904 RefSeq:NP_066959.1 RefSeq:NP_996734.1 UniGene:Hs.368626
ProteinModelPortal:Q16799 SMR:Q16799 IntAct:Q16799 MINT:MINT-154554
STRING:Q16799 PhosphoSite:Q16799 DMDM:12643733 PaxDb:Q16799
PRIDE:Q16799 Ensembl:ENST00000267484 Ensembl:ENST00000342503
GeneID:6252 KEGG:hsa:6252 UCSC:uc001xek.2 UCSC:uc001xem.1
UCSC:uc001xen.1 CTD:6252 GeneCards:GC14M060062 HGNC:HGNC:10467
HPA:CAB002745 MIM:600865 neXtProt:NX_Q16799 PharmGKB:PA34880
eggNOG:NOG306139 HOGENOM:HOG000134444 InParanoid:Q16799 OMA:PFLNKQK
OrthoDB:EOG437RDX PhylomeDB:Q16799 ChiTaRS:RTN1 GenomeRNAi:6252
NextBio:24277 ArrayExpress:Q16799 Bgee:Q16799 CleanEx:HS_RTN1
Genevestigator:Q16799 GermOnline:ENSG00000139970 Uniprot:Q16799
Length = 776
Score = 162 (62.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 48/188 (25%), Positives = 95/188 (50%)
Query: 70 KPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--VLF-LWSNAS 126
K D+ WR+ K G++ G+ + +LF L ++ ++++V + + AL+ + F ++ +
Sbjct: 588 KAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 645
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
+ K+ P E+ + +E + + L+F +N LR + +DL L
Sbjct: 646 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKF 705
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+W+++ VG+ N LTL + V + T+PV+Y K++ ++D + I AV
Sbjct: 706 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHIN---AVV- 761
Query: 240 AKVLSKIP 247
AK+ +KIP
Sbjct: 762 AKIQAKIP 769
>UNIPROTKB|Q6IFY7 [details] [associations]
symbol:rtn1-a "Reticulon-1-A" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994 EMBL:AY182251
EMBL:CD360654 EMBL:BK004007 RefSeq:NP_001089006.1 UniGene:Xl.24060
ProteinModelPortal:Q6IFY7 SMR:Q6IFY7 GeneID:496390 KEGG:xla:496390
CTD:496390 Xenbase:XB-GENE-6252069 HOVERGEN:HBG000838
Uniprot:Q6IFY7
Length = 207
Score = 147 (56.8 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 43/192 (22%), Positives = 96/192 (50%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--VLF-LWSNASTFI 129
D+ WR+ K G++ G+ + +LF L+++ +++++ + + AL+ + F ++ + +
Sbjct: 23 DLLYWRDIK-QTGIVFGSVLL-MLFSLIQFSVVSVMAYLALAALSATISFRIYKSVLQAV 80
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
K+ P E+ + +E + + L+ N LR + +DL L
Sbjct: 81 QKTDEGHPFKSYLDMEISLSQEQIQKYTDCLQVYTNSIAKELRRLFLVQDLVDSLKFAVL 140
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N LTL + V + ++PV+Y+KY+ ++D + ++ K+
Sbjct: 141 MWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQYL----GLVRTNMNTIMTKI 196
Query: 243 LSKIPRSLKDKK 254
+KIP + K K+
Sbjct: 197 QAKIPGT-KQKE 207
>UNIPROTKB|F1NH22 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02003912
EMBL:AADN02003911 IPI:IPI00583109 Ensembl:ENSGALT00000019594
ArrayExpress:F1NH22 Uniprot:F1NH22
Length = 208
Score = 147 (56.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 44/194 (22%), Positives = 97/194 (50%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--VLF-LWSNASTFI 129
++ WR+ K G++ G+ + +LF L ++ ++++V + + L+ + F ++ + +
Sbjct: 23 NLLYWRDIK-QTGIVFGSLLL-LLFSLTQFSVVSVVAYLALAGLSATISFRIYKSVLQAV 80
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
K+ P E+ + ++ + + L+ +N LR + +DL L
Sbjct: 81 QKTDEGHPFKAYLDMEMNLSQDQIQKYTDCLQLYVNSTVKELRRLFLVQDLVDSLKFAVL 140
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N LTL + V + T+PV+Y+KY+ ++D + ++ AK+
Sbjct: 141 MWLLTYVGALFNGLTLLIMAVVSMFTLPVVYDKYQAQIDQYL----GLVRTHINTVVAKI 196
Query: 243 LSKIPRSLKDKKKA 256
+KIP + K+KA
Sbjct: 197 QAKIPGA---KRKA 207
>UNIPROTKB|D4A1U2 [details] [associations]
symbol:Rtn3 "Reticulon 3, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620988 GO:GO:0005783 EMBL:CH473953 PANTHER:PTHR10994
UniGene:Rn.11652 IPI:IPI00562895 Ensembl:ENSRNOT00000046063
Uniprot:D4A1U2
Length = 256
Score = 153 (58.9 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 47/204 (23%), Positives = 99/204 (48%)
Query: 60 KPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVL 119
+PV + + D+ WR+ K G + G T I +L L + ++++V + ++ L+V
Sbjct: 58 QPV-SIFSTSQVHDLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVSYLILALLSVT 114
Query: 120 F---LWSNASTFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIAS 169
++ + + KS P ++ + E +A +N+A L+ +
Sbjct: 115 ISFRVYKSVIQAVQKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFL 174
Query: 170 GRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWA 229
DL L + +W+++ VG+ N +TL + +L+ +VP++YEKY+ ++D + A
Sbjct: 175 VEDLVDSLKLAVFMWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARD 234
Query: 230 EIKKQYAVFDAKVLSKIPRSLKDK 253
+ K ++ + K+ +K+P K K
Sbjct: 235 QTK---SIVE-KIQAKLPGIAKKK 254
>ZFIN|ZDB-GENE-030710-5 [details] [associations]
symbol:rtn3 "reticulon 3" species:7955 "Danio rerio"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-5 GO:GO:0005783 PANTHER:PTHR10994
HOVERGEN:HBG000838 GeneTree:ENSGT00390000009934
HOGENOM:HOG000015254 eggNOG:NOG303514 OrthoDB:EOG4229M0
EMBL:CT030012 EMBL:CU457795 EMBL:AY555038 IPI:IPI00774300
RefSeq:XP_003198973.1 UniGene:Dr.130204 SMR:Q4G5W3
Ensembl:ENSDART00000041088 Ensembl:ENSDART00000124244
GeneID:100538268 KEGG:dre:100538268 InParanoid:Q4G5W3
Uniprot:Q4G5W3
Length = 236
Score = 150 (57.9 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 47/189 (24%), Positives = 92/189 (48%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K S GV+ G + + +L L + ++++V + L+ L V ++ + +
Sbjct: 49 DLVHWRDPKKS-GVVFGVSLL-LLLSLAAFSVISVVSYLLLSLLCVTISFRIYKSVIQAV 106
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P +V +P E + +NRA + + DL L +
Sbjct: 107 QKSNEGHPFKALMDKDVTVPPETFRKHVDGCLSHVNRALKQMSRLFLVEDLVDSLKLAVV 166
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N +T+ + +LL +VP IYEK + ++D + + A + Q+ AK+
Sbjct: 167 MWLLTYVGAVFNGITILILADILLFSVPPIYEKNKTQIDHYIDIA----RTQFNTTVAKL 222
Query: 243 LSKIPRSLK 251
K+P ++K
Sbjct: 223 QEKLPGAMK 231
>UNIPROTKB|F1Q231 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03005762
Ensembl:ENSCAFT00000024697 Uniprot:F1Q231
Length = 704
Score = 158 (60.7 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 43/180 (23%), Positives = 89/180 (49%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--VLF-LWSNASTFI 129
D+ WR+ K G++ G+ + +LF L ++ ++++V + + AL+ + F ++ + +
Sbjct: 519 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 576
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
K+ P E+ + +E + + L+F +N LR + +DL L
Sbjct: 577 QKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 636
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N LTL + V + T+PV+Y K++ ++D + I A AK+
Sbjct: 637 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINTVVAKIQAKI 696
>UNIPROTKB|F1P5B2 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AADN02044318
IPI:IPI00594028 Ensembl:ENSGALT00000040233 ArrayExpress:F1P5B2
Uniprot:F1P5B2
Length = 344
Score = 153 (58.9 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 52/191 (27%), Positives = 91/191 (47%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K GV+ GA+ +++L L + ++++ + + L+V ++ I
Sbjct: 159 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 216
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P +V + EE + + +S + IN LR + DL L
Sbjct: 217 QKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKELRRLFLVDDLVDSLKFAVL 276
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+WV + VG+ N LTL + + L +VPVIYE+++ ++D + +K A K+
Sbjct: 277 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLVNKNVKDAMA----KI 332
Query: 243 LSKIPRSLKDK 253
+KIP LK K
Sbjct: 333 QAKIP-GLKRK 342
>UNIPROTKB|F5H774 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AP006289 PANTHER:PTHR10994 CTD:10313 EMBL:AP000753
RefSeq:NP_001252519.1 UniGene:Hs.473761 GeneID:10313 KEGG:hsa:10313
HGNC:HGNC:10469 ChiTaRS:RTN3 IPI:IPI01009279
ProteinModelPortal:F5H774 SMR:F5H774 Ensembl:ENST00000540798
UCSC:uc009yov.3 ArrayExpress:F5H774 Bgee:F5H774 Uniprot:F5H774
Length = 920
Score = 158 (60.7 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 47/191 (24%), Positives = 94/191 (49%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K G + G T I +L L + ++++V + ++ L+V ++ + +
Sbjct: 734 DLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 791
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P ++ + E +A INRA L+ + DL L +
Sbjct: 792 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 851
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N +TL + +L+ +VP++YEKY+ ++D + A + K ++ + K+
Sbjct: 852 MWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTK---SIVE-KI 907
Query: 243 LSKIPRSLKDK 253
+K+P K K
Sbjct: 908 QAKLPGIAKKK 918
>UNIPROTKB|E2R925 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03007528
EMBL:AAEX03007529 Ensembl:ENSCAFT00000004428 Uniprot:E2R925
Length = 1186
Score = 159 (61.0 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 54/191 (28%), Positives = 93/191 (48%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K GV+ GA+ +++L L + ++++ + ++ L+V ++ I
Sbjct: 1001 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIVLALLSVTISFRIYKGVIQAI 1058
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P EV I EE V + +++ +N LR + DL L
Sbjct: 1059 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 1118
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+WV + VG+ N LTL + + L +VPVIYE+++ ++D + A +K A K+
Sbjct: 1119 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKSVKDAMA----KI 1174
Query: 243 LSKIPRSLKDK 253
+KIP LK K
Sbjct: 1175 QAKIP-GLKRK 1184
>UNIPROTKB|J9P0R7 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:HTSENKT
EMBL:AAEX03007528 EMBL:AAEX03007529 Ensembl:ENSCAFT00000045541
Uniprot:J9P0R7
Length = 1198
Score = 159 (61.0 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 54/191 (28%), Positives = 93/191 (48%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K GV+ GA+ +++L L + ++++ + ++ L+V ++ I
Sbjct: 1013 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIVLALLSVTISFRIYKGVIQAI 1070
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P EV I EE V + +++ +N LR + DL L
Sbjct: 1071 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 1130
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+WV + VG+ N LTL + + L +VPVIYE+++ ++D + A +K A K+
Sbjct: 1131 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKSVKDAMA----KI 1186
Query: 243 LSKIPRSLKDK 253
+KIP LK K
Sbjct: 1187 QAKIP-GLKRK 1196
>UNIPROTKB|O95197 [details] [associations]
symbol:RTN3 "Reticulon-3" species:9606 "Homo sapiens"
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006950 "response
to stress" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0071786 "endoplasmic
reticulum tubular network organization" evidence=IMP] [GO:0005615
"extracellular space" evidence=TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005783 GO:GO:0016021 GO:GO:0006915
GO:GO:0019048 GO:GO:0005615 GO:GO:0000139 GO:GO:0006950
GO:GO:0016192 GO:GO:0005789 EMBL:CH471076 EMBL:AP006289
PANTHER:PTHR10994 GO:GO:0071786 CTD:10313 eggNOG:NOG303514
EMBL:AF059524 EMBL:AF059529 EMBL:AF059525 EMBL:AF059526
EMBL:AF059527 EMBL:AF059528 EMBL:AF119297 EMBL:AY427821
EMBL:AY750848 EMBL:AP000753 EMBL:AK297529 EMBL:AB209771
EMBL:AK075412 EMBL:AK222898 EMBL:AK295361 EMBL:BC000634
EMBL:BC010556 EMBL:BC011394 EMBL:BC022993 EMBL:BC100822
EMBL:BC100823 EMBL:BC105981 EMBL:BC105982 EMBL:BC118628
EMBL:BC118550 EMBL:BK001685 EMBL:BK001681 EMBL:BK001684
IPI:IPI00028946 IPI:IPI00394896 IPI:IPI00398795 IPI:IPI00412154
IPI:IPI00743293 RefSeq:NP_001252518.1 RefSeq:NP_001252519.1
RefSeq:NP_001252520.1 RefSeq:NP_006045.1 RefSeq:NP_958831.1
RefSeq:NP_958832.1 RefSeq:NP_958833.1 UniGene:Hs.473761
ProteinModelPortal:O95197 SMR:O95197 IntAct:O95197 STRING:O95197
PhosphoSite:O95197 PaxDb:O95197 PRIDE:O95197 DNASU:10313
Ensembl:ENST00000339997 Ensembl:ENST00000341307
Ensembl:ENST00000354497 Ensembl:ENST00000356000
Ensembl:ENST00000377819 Ensembl:ENST00000537981 GeneID:10313
KEGG:hsa:10313 UCSC:uc001nxm.3 UCSC:uc001nxn.3 UCSC:uc001nxo.3
UCSC:uc001nxp.3 UCSC:uc001nxq.3 GeneCards:GC11P063448
H-InvDB:HIX0021346 HGNC:HGNC:10469 HPA:HPA015649 HPA:HPA015650
MIM:604249 neXtProt:NX_O95197 PharmGKB:PA34882 HOVERGEN:HBG093922
InParanoid:O95197 OMA:KGRISTW ChiTaRS:RTN3 GenomeRNAi:10313
NextBio:39085 ArrayExpress:O95197 Bgee:O95197 Genevestigator:O95197
GermOnline:ENSG00000133318 Uniprot:O95197
Length = 1032
Score = 158 (60.7 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 47/191 (24%), Positives = 94/191 (49%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K G + G T I +L L + ++++V + ++ L+V ++ + +
Sbjct: 846 DLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 903
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P ++ + E +A INRA L+ + DL L +
Sbjct: 904 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 963
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N +TL + +L+ +VP++YEKY+ ++D + A + K ++ + K+
Sbjct: 964 MWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTK---SIVE-KI 1019
Query: 243 LSKIPRSLKDK 253
+K+P K K
Sbjct: 1020 QAKLPGIAKKK 1030
>MGI|MGI:1915835 [details] [associations]
symbol:Rtn4 "reticulon 4" species:10090 "Mus musculus"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0007399 "nervous system development"
evidence=IDA] [GO:0007413 "axonal fasciculation" evidence=ISO;IMP]
[GO:0010977 "negative regulation of neuron projection development"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0021801 "cerebral cortex
radial glia guided migration" evidence=IMP] [GO:0030176 "integral
to endoplasmic reticulum membrane" evidence=ISO;ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISO] [GO:0030334
"regulation of cell migration" evidence=ISO] [GO:0030517 "negative
regulation of axon extension" evidence=ISO;ISS;IMP] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0033603 "positive
regulation of dopamine secretion" evidence=ISO] [GO:0042995 "cell
projection" evidence=IDA] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO;IDA]
[GO:0043209 "myelin sheath" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISO] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=ISO] [GO:0048679 "regulation
of axon regeneration" evidence=ISO] [GO:0050771 "negative
regulation of axonogenesis" evidence=ISO] [GO:0051930 "regulation
of sensory perception of pain" evidence=ISO] [GO:0051960
"regulation of nervous system development" evidence=IMP]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IMP] [GO:0070571 "negative regulation of neuron projection
regeneration" evidence=ISO] [GO:0071786 "endoplasmic reticulum
tubular network organization" evidence=ISO] [GO:2000172 "regulation
of branching morphogenesis of a nerve" evidence=ISO;IMP]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1915835
GO:GO:0005886 GO:GO:0005635 GO:GO:0043234 GO:GO:0014823
GO:GO:0007568 GO:GO:0051930 GO:GO:0043025 GO:GO:0033603
GO:GO:0045665 GO:GO:0043005 GO:GO:0001525 GO:GO:0030334
GO:GO:0030176 GO:GO:0042995 GO:GO:0060317 GO:GO:0007413
GO:GO:0048709 GO:GO:0043209 GO:GO:0030517 GO:GO:0021553
EMBL:AL929371 UniGene:Mm.445271 GO:GO:0045687 GO:GO:0021801
PANTHER:PTHR10994 GO:GO:0071786 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 CTD:57142 HOVERGEN:HBG023134
ChiTaRS:RTN4 GO:GO:0070571 GO:GO:0048679 GO:GO:2000172
EMBL:AY102280 EMBL:AY102284 EMBL:AY102286 EMBL:AF326337
EMBL:AY114152 EMBL:AK220511 EMBL:BC032192 EMBL:BC056373
EMBL:AB073672 EMBL:AK003859 IPI:IPI00120415 IPI:IPI00270767
IPI:IPI00469392 RefSeq:NP_077188.1 RefSeq:NP_918940.1
RefSeq:NP_918943.1 UniGene:Mm.192580 UniGene:Mm.440639
UniGene:Mm.488364 PDB:2KO2 PDBsum:2KO2 ProteinModelPortal:Q99P72
SMR:Q99P72 IntAct:Q99P72 MINT:MINT-188330 STRING:Q99P72
PhosphoSite:Q99P72 PaxDb:Q99P72 PRIDE:Q99P72
Ensembl:ENSMUST00000060992 Ensembl:ENSMUST00000102841
Ensembl:ENSMUST00000102843 GeneID:68585 KEGG:mmu:68585
UCSC:uc007ihk.2 UCSC:uc007ihn.2 InParanoid:Q99P72 OMA:HTSENKT
OrthoDB:EOG4XH010 EvolutionaryTrace:Q99P72 NextBio:327502
Bgee:Q99P72 CleanEx:MM_RTN4 Genevestigator:Q99P72
GermOnline:ENSMUSG00000020458 Uniprot:Q99P72
Length = 1162
Score = 158 (60.7 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 53/191 (27%), Positives = 92/191 (48%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K GV+ GA+ +++L L + ++++ + + L+V ++ I
Sbjct: 977 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1034
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P EV I EE V + +++ +N LR + DL L
Sbjct: 1035 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 1094
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+WV + VG+ N LTL + + L ++PVIYE+++ ++D + A +K A K+
Sbjct: 1095 MWVFTYVGALFNGLTLLILALISLFSIPVIYERHQAQIDHYLGLANKSVKDAMA----KI 1150
Query: 243 LSKIPRSLKDK 253
+KIP LK K
Sbjct: 1151 QAKIP-GLKRK 1160
>UNIPROTKB|F8WAM4 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
EMBL:AC013414 PANTHER:PTHR10994 EMBL:AC092461 EMBL:AC093165
HGNC:HGNC:14085 ChiTaRS:RTN4 IPI:IPI01025160
ProteinModelPortal:F8WAM4 SMR:F8WAM4 PRIDE:F8WAM4
Ensembl:ENST00000354474 ArrayExpress:F8WAM4 Bgee:F8WAM4
Uniprot:F8WAM4
Length = 960
Score = 157 (60.3 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 54/191 (28%), Positives = 92/191 (48%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K GV+ GA+ +++L L + ++++ + + L+V ++ I
Sbjct: 775 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 832
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P EV I EE V + +++ +N LR + DL L
Sbjct: 833 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 892
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+WV + VG+ N LTL + + L +VPVIYE+++ ++D + A +K A K+
Sbjct: 893 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMA----KI 948
Query: 243 LSKIPRSLKDK 253
+KIP LK K
Sbjct: 949 QAKIP-GLKRK 958
>UNIPROTKB|D4AEM9 [details] [associations]
symbol:Rtn4 "Reticulon-4" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 RGD:620989
GO:GO:0005783 PANTHER:PTHR10994 IPI:IPI00568363
Ensembl:ENSRNOT00000051817 ArrayExpress:D4AEM9 Uniprot:D4AEM9
Length = 1045
Score = 157 (60.3 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 53/191 (27%), Positives = 92/191 (48%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K GV+ GA+ +++L L + ++++ + + L+V ++ I
Sbjct: 860 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 917
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P EV I EE V + +++ +N LR + DL L
Sbjct: 918 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 977
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+WV + VG+ N LTL + + L ++PVIYE+++ ++D + A +K A K+
Sbjct: 978 MWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMA----KI 1033
Query: 243 LSKIPRSLKDK 253
+KIP LK K
Sbjct: 1034 QAKIP-GLKRK 1043
>UNIPROTKB|F1Q2B3 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03005762
Ensembl:ENSCAFT00000039479 Uniprot:F1Q2B3
Length = 715
Score = 155 (59.6 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 44/183 (24%), Positives = 90/183 (49%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--VLF-LWSNASTFI 129
D+ WR+ K G++ G+ + +LF L ++ ++++V + + AL+ + F ++ + +
Sbjct: 524 DLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVLQAV 581
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
K+ P E+ + +E + + L+F +N LR + +DL L
Sbjct: 582 QKTDEGHPFKTYLELEITLSQEQIQKYTDCLQFYVNNTLKELRRLFLVQDLVDSLKFAVL 641
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N LTL + V + T+PV+Y K++ ++D + I A D +
Sbjct: 642 MWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQIDQYLGLVRTHINTVVAKSDLQH 701
Query: 243 LSK 245
SK
Sbjct: 702 TSK 704
>RGD|620989 [details] [associations]
symbol:Rtn4 "reticulon 4" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0007413 "axonal fasciculation" evidence=ISO;IDA]
[GO:0007568 "aging" evidence=IEP] [GO:0010977 "negative regulation
of neuron projection development" evidence=IDA] [GO:0014823
"response to activity" evidence=IEP] [GO:0016021 "integral to
membrane" evidence=TAS] [GO:0021553 "olfactory nerve development"
evidence=IEP] [GO:0021801 "cerebral cortex radial glia guided
migration" evidence=ISO;ISS] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=ISO;IDA] [GO:0030308 "negative
regulation of cell growth" evidence=ISO] [GO:0030334 "regulation of
cell migration" evidence=ISO] [GO:0030517 "negative regulation of
axon extension" evidence=ISO;ISS;IDA] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0033603 "positive regulation of dopamine
secretion" evidence=IMP] [GO:0042995 "cell projection"
evidence=ISO] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=ISO;IDA] [GO:0043209
"myelin sheath" evidence=IDA] [GO:0043234 "protein complex"
evidence=IDA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IDA] [GO:0045687 "positive regulation of
glial cell differentiation" evidence=IDA] [GO:0048679 "regulation
of axon regeneration" evidence=IDA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEP] [GO:0050771 "negative regulation of
axonogenesis" evidence=IDA;IMP] [GO:0051930 "regulation of sensory
perception of pain" evidence=IDA] [GO:0051960 "regulation of
nervous system development" evidence=ISO] [GO:0060317 "cardiac
epithelial to mesenchymal transition" evidence=ISO] [GO:0070571
"negative regulation of neuron projection regeneration"
evidence=IMP] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=ISO] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=ISO;IDA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 RGD:620989 GO:GO:0005886 GO:GO:0005635
GO:GO:0043234 GO:GO:0032403 GO:GO:0014823 GO:GO:0007568
GO:GO:0051930 GO:GO:0043025 GO:GO:0033603 GO:GO:0045665
GO:GO:0043005 GO:GO:0001525 GO:GO:0030334 GO:GO:0030176
GO:GO:0060317 GO:GO:0007413 GO:GO:0048709 GO:GO:0043209
GO:GO:0030517 GO:GO:0021553 GO:GO:0045687 GO:GO:0021801
PANTHER:PTHR10994 GO:GO:0071786 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 CTD:57142 HOVERGEN:HBG023134
GO:GO:0070571 GO:GO:0048679 GO:GO:2000172 OrthoDB:EOG4XH010
EMBL:AF051335 EMBL:AJ242961 EMBL:AJ242962 EMBL:AJ242963
EMBL:AF132045 EMBL:AF132046 IPI:IPI00230986 IPI:IPI00230987
IPI:IPI00231765 IPI:IPI00778998 RefSeq:NP_114019.1 UniGene:Rn.1348
UniGene:Rn.163269 ProteinModelPortal:Q9JK11 SMR:Q9JK11
IntAct:Q9JK11 STRING:Q9JK11 PhosphoSite:Q9JK11 PRIDE:Q9JK11
Ensembl:ENSRNOT00000006957 Ensembl:ENSRNOT00000042965
Ensembl:ENSRNOT00000056823 GeneID:83765 KEGG:rno:83765
UCSC:RGD:620989 HOGENOM:HOG000148576 InParanoid:Q9JK11
NextBio:616333 ArrayExpress:Q9JK11 Genevestigator:Q9JK11
GermOnline:ENSRNOG00000004621 Uniprot:Q9JK11
Length = 1163
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 53/191 (27%), Positives = 92/191 (48%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K GV+ GA+ +++L L + ++++ + + L+V ++ I
Sbjct: 978 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1035
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P EV I EE V + +++ +N LR + DL L
Sbjct: 1036 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 1095
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+WV + VG+ N LTL + + L ++PVIYE+++ ++D + A +K A K+
Sbjct: 1096 MWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMA----KI 1151
Query: 243 LSKIPRSLKDK 253
+KIP LK K
Sbjct: 1152 QAKIP-GLKRK 1161
>UNIPROTKB|F1LQN3 [details] [associations]
symbol:Rtn4 "Reticulon-4" species:10116 "Rattus norvegicus"
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0005635 "nuclear
envelope" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0021801 "cerebral cortex radial glia guided migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0060317 "cardiac
epithelial to mesenchymal transition" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=IEA]
[GO:2000172 "regulation of branching morphogenesis of a nerve"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620989 GO:GO:0005783 GO:GO:0005635 GO:GO:0030308 GO:GO:0043025
GO:GO:0001525 GO:GO:0030334 GO:GO:0042995 GO:GO:0060317
GO:GO:0007413 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 GO:GO:2000172 IPI:IPI00231765
PRIDE:F1LQN3 Ensembl:ENSRNOT00000006443 ArrayExpress:F1LQN3
Uniprot:F1LQN3
Length = 1163
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 53/191 (27%), Positives = 92/191 (48%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K GV+ GA+ +++L L + ++++ + + L+V ++ I
Sbjct: 978 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1035
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P EV I EE V + +++ +N LR + DL L
Sbjct: 1036 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKFAVL 1095
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+WV + VG+ N LTL + + L ++PVIYE+++ ++D + A +K A K+
Sbjct: 1096 MWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMA----KI 1151
Query: 243 LSKIPRSLKDK 253
+KIP LK K
Sbjct: 1152 QAKIP-GLKRK 1161
>UNIPROTKB|Q9NQC3 [details] [associations]
symbol:RTN4 "Reticulon-4" species:9606 "Homo sapiens"
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0060317 "cardiac epithelial to mesenchymal
transition" evidence=IEA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=IDA] [GO:0030517 "negative regulation of axon extension"
evidence=IDA] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0042981
"regulation of apoptotic process" evidence=NAS] [GO:0006915
"apoptotic process" evidence=NAS] [GO:0021801 "cerebral cortex
radial glia guided migration" evidence=ISS] [GO:0007413 "axonal
fasciculation" evidence=ISS] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=ISS] [GO:0071786 "endoplasmic
reticulum tubular network organization" evidence=IMP] [GO:0030334
"regulation of cell migration" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 GO:GO:0005886 GO:GO:0005635 Reactome:REACT_111102
GO:GO:0006915 GO:GO:0048011 Pathway_Interaction_DB:p75ntrpathway
EMBL:CH471053 GO:GO:0043234 GO:GO:0042981 GO:GO:0014823
GO:GO:0007568 GO:GO:0051930 GO:GO:0043025 GO:GO:0033603
GO:GO:0045665 GO:GO:0043005 GO:GO:0001525 GO:GO:0030334
GO:GO:0030176 GO:GO:0060317 GO:GO:0007413 GO:GO:0048709
GO:GO:0043209 GO:GO:0030517 GO:GO:0021553 EMBL:AC013414
GO:GO:0045687 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
eggNOG:NOG306139 EMBL:AF087901 EMBL:AF148537 EMBL:AF148538
EMBL:AJ251383 EMBL:AJ251384 EMBL:AJ251385 EMBL:AB040462
EMBL:AB040463 EMBL:AF333336 EMBL:AY102285 EMBL:AY102276
EMBL:AY102277 EMBL:AY102278 EMBL:AY102279 EMBL:AY123245
EMBL:AY123246 EMBL:AY123247 EMBL:AY123248 EMBL:AY123249
EMBL:AY123250 EMBL:AB015639 EMBL:AF077050 EMBL:AF132047
EMBL:AF132048 EMBL:AF320999 EMBL:AB020693 EMBL:AF125103
EMBL:AF177332 EMBL:AC092461 EMBL:AC093165 EMBL:BC001035
EMBL:BC007109 EMBL:BC010737 EMBL:BC012619 EMBL:BC014366
EMBL:BC016165 EMBL:BC026788 EMBL:BC068991 EMBL:BC150182
EMBL:BC152425 EMBL:BC152555 EMBL:AF063601 IPI:IPI00021766
IPI:IPI00219207 IPI:IPI00298289 IPI:IPI00477663 IPI:IPI00478442
IPI:IPI00894213 RefSeq:NP_008939.1 RefSeq:NP_065393.1
RefSeq:NP_722550.1 RefSeq:NP_997403.1 RefSeq:NP_997404.1
UniGene:Hs.741208 PDB:2G31 PDB:2JV5 PDBsum:2G31 PDBsum:2JV5
ProteinModelPortal:Q9NQC3 SMR:Q9NQC3 IntAct:Q9NQC3 MINT:MINT-154434
STRING:Q9NQC3 PhosphoSite:Q9NQC3 DMDM:17369290 PaxDb:Q9NQC3
PRIDE:Q9NQC3 DNASU:57142 Ensembl:ENST00000317610
Ensembl:ENST00000337526 Ensembl:ENST00000357376
Ensembl:ENST00000357732 Ensembl:ENST00000394609
Ensembl:ENST00000394611 Ensembl:ENST00000404909
Ensembl:ENST00000405240 GeneID:57142 KEGG:hsa:57142 UCSC:uc002ryd.3
UCSC:uc002ryf.3 CTD:57142 GeneCards:GC02M055199 H-InvDB:HIX0002059
HGNC:HGNC:14085 HPA:CAB005388 MIM:604475 neXtProt:NX_Q9NQC3
PharmGKB:PA34883 HOVERGEN:HBG023134 InParanoid:Q9NQC3 ChiTaRS:RTN4
EvolutionaryTrace:Q9NQC3 GenomeRNAi:57142 NextBio:63075
PMAP-CutDB:Q9NQC3 ArrayExpress:Q9NQC3 Bgee:Q9NQC3
Genevestigator:Q9NQC3 GermOnline:ENSG00000115310 GO:GO:0070571
GO:GO:0048679 GO:GO:2000172 Uniprot:Q9NQC3
Length = 1192
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 54/191 (28%), Positives = 92/191 (48%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K GV+ GA+ +++L L + ++++ + + L+V ++ I
Sbjct: 1007 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1064
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P EV I EE V + +++ +N LR + DL L
Sbjct: 1065 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 1124
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+WV + VG+ N LTL + + L +VPVIYE+++ ++D + A +K A K+
Sbjct: 1125 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMA----KI 1180
Query: 243 LSKIPRSLKDK 253
+KIP LK K
Sbjct: 1181 QAKIP-GLKRK 1190
>UNIPROTKB|F1N405 [details] [associations]
symbol:RTN4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000172 "regulation of branching morphogenesis of a
nerve" evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=IEA] [GO:0060317 "cardiac epithelial
to mesenchymal transition" evidence=IEA] [GO:0043025 "neuronal cell
body" evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0021801 "cerebral cortex radial glia guided migration"
evidence=IEA] [GO:0007413 "axonal fasciculation" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0005783 GO:GO:0005635 GO:GO:0030308 GO:GO:0043025
GO:GO:0001525 GO:GO:0030334 GO:GO:0042995 GO:GO:0060317
GO:GO:0007413 GO:GO:0021801 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 GO:GO:2000172 OMA:HTSENKT
EMBL:DAAA02030906 EMBL:DAAA02030907 IPI:IPI00705603
Ensembl:ENSBTAT00000014745 ArrayExpress:F1N405 Uniprot:F1N405
Length = 1202
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 54/191 (28%), Positives = 92/191 (48%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K GV+ GA+ +++L L + ++++ + + L+V ++ I
Sbjct: 1017 DLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAI 1074
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P EV I EE V + +++ +N LR + DL L
Sbjct: 1075 QKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVL 1134
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+WV + VG+ N LTL + + L +VPVIYE+++ ++D + A +K A K+
Sbjct: 1135 MWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMA----KI 1190
Query: 243 LSKIPRSLKDK 253
+KIP LK K
Sbjct: 1191 QAKIP-GLKRK 1200
>RGD|620986 [details] [associations]
symbol:Rtn1 "reticulon 1" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=ISO] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 RGD:620986 GO:GO:0016021 GO:GO:0030182
GO:GO:0005789 PANTHER:PTHR10994 HOVERGEN:HBG008971 CTD:6252
eggNOG:NOG306139 OrthoDB:EOG437RDX GeneTree:ENSGT00390000009934
EMBL:U17604 EMBL:U17603 IPI:IPI00213559 IPI:IPI00231126
RefSeq:NP_446317.1 UniGene:Rn.55126 ProteinModelPortal:Q64548
SMR:Q64548 STRING:Q64548 PRIDE:Q64548 Ensembl:ENSRNOT00000006373
GeneID:116644 KEGG:rno:116644 UCSC:RGD:620986 HOGENOM:HOG000015254
NextBio:619379 Genevestigator:Q64548 Uniprot:Q64548
Length = 777
Score = 155 (59.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 44/183 (24%), Positives = 89/183 (48%)
Query: 70 KPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--VLF-LWSNAS 126
K D+ WR+ K G++ G+ + +LF L ++ ++++V + + AL+ + F ++ +
Sbjct: 589 KAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 646
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
+ K+ P E+ + +E + + L+ +N LR + +DL L
Sbjct: 647 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKF 706
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+W+++ VG+ N LTL + V + T+PV+Y K++ +VD + I A
Sbjct: 707 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVAKIQ 766
Query: 240 AKV 242
AK+
Sbjct: 767 AKI 769
>MGI|MGI:1933947 [details] [associations]
symbol:Rtn1 "reticulon 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1933947
GO:GO:0005783 GO:GO:0016021 GO:GO:0030182 GO:GO:0005789
PANTHER:PTHR10994 HOVERGEN:HBG008971 CTD:6252 eggNOG:NOG306139
HOGENOM:HOG000134444 OrthoDB:EOG437RDX ChiTaRS:RTN1 EMBL:AB074899
EMBL:BC030455 EMBL:BC053926 EMBL:BC058579 EMBL:BK001694
IPI:IPI00395193 RefSeq:NP_001007597.1 RefSeq:NP_703187.2
UniGene:Mm.221275 ProteinModelPortal:Q8K0T0 SMR:Q8K0T0
IntAct:Q8K0T0 STRING:Q8K0T0 PhosphoSite:Q8K0T0 PaxDb:Q8K0T0
PRIDE:Q8K0T0 Ensembl:ENSMUST00000078505 GeneID:104001
KEGG:mmu:104001 GeneTree:ENSGT00390000009934 InParanoid:Q8K0T0
NextBio:356325 Bgee:Q8K0T0 CleanEx:MM_RTN1 Genevestigator:Q8K0T0
GermOnline:ENSMUSG00000021087 Uniprot:Q8K0T0
Length = 780
Score = 155 (59.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 44/183 (24%), Positives = 89/183 (48%)
Query: 70 KPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--VLF-LWSNAS 126
K D+ WR+ K G++ G+ + +LF L ++ ++++V + + AL+ + F ++ +
Sbjct: 592 KAIDLLYWRDIK-QTGIVFGSFLL-LLFSLTQFSVVSVVAYLALAALSATISFRIYKSVL 649
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
+ K+ P E+ + +E + + L+ +N LR + +DL L
Sbjct: 650 QAVQKTDEGHPFKAYLELEITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKF 709
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+W+++ VG+ N LTL + V + T+PV+Y K++ +VD + I A
Sbjct: 710 AVLMWLLTYVGALFNGLTLLLMAVVSMFTLPVVYVKHQAQVDQYLGLVRTHINTVVAKIQ 769
Query: 240 AKV 242
AK+
Sbjct: 770 AKI 772
>UNIPROTKB|F1NNJ7 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0007413 "axonal
fasciculation" evidence=IEA] [GO:0021801 "cerebral cortex radial
glia guided migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 GO:GO:0005635
GO:GO:0030308 GO:GO:0043025 GO:GO:0030334 GO:GO:0042995
PANTHER:PTHR10994 GO:GO:0071786 GeneTree:ENSGT00390000009934
GO:GO:2000172 EMBL:AADN02044318 IPI:IPI00680876
Ensembl:ENSGALT00000031997 ArrayExpress:F1NNJ7 Uniprot:F1NNJ7
Length = 659
Score = 154 (59.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 58 REKPV---HKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIV 114
+EKP L D+ WR+ K GV+ GA+ +++L L + ++++ + +
Sbjct: 456 KEKPTAVFSAKLNVSSVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALA 513
Query: 115 ALAVLF---LWSNASTFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLL 164
L+V ++ I KS P +V + EE + + +S + IN L
Sbjct: 514 LLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKEL 573
Query: 165 REIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFS 224
R + DL L +WV + VG+ N LTL + + L +VPVIYE+++ ++D +
Sbjct: 574 RRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYL 633
Query: 225 EKAWAEIKKQYAVFDAKVLSKIPRSLKDK 253
+K A K+ +KIP LK K
Sbjct: 634 GLVNKNVKDAMA----KIQAKIP-GLKRK 657
>UNIPROTKB|F1PVP5 [details] [associations]
symbol:F1PVP5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:AAEX03011658
EMBL:AAEX03011657 Ensembl:ENSCAFT00000023909 Uniprot:F1PVP5
Length = 1042
Score = 156 (60.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 47/192 (24%), Positives = 94/192 (48%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K G + G T I +L L + ++++V + ++ L+V ++ + +
Sbjct: 855 DLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 912
Query: 130 NKSPPRIP--------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIA 181
KS P ++ + E +A INRA L+ + DL L +
Sbjct: 913 QKSEEGHPFKRAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAV 972
Query: 182 GLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAK 241
+W+++ VG+ N +TL + +L+ +VP++YEKY+ ++D + A + K ++ + K
Sbjct: 973 FMWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIARDQTK---SIVE-K 1028
Query: 242 VLSKIPRSLKDK 253
+ +K+P K K
Sbjct: 1029 IQAKLPGIAKKK 1040
>UNIPROTKB|F1NH23 [details] [associations]
symbol:RTN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0030182 "neuron differentiation" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 OMA:PFLNKQK GeneTree:ENSGT00390000009934
EMBL:AADN02003912 EMBL:AADN02003911 IPI:IPI00586633
Ensembl:ENSGALT00000019593 ArrayExpress:F1NH23 Uniprot:F1NH23
Length = 760
Score = 153 (58.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 47/206 (22%), Positives = 101/206 (49%)
Query: 61 PVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--V 118
P+ L K ++ WR+ K G++ G+ + +LF L ++ ++++V + + L+ +
Sbjct: 563 PLLPFLNKQKAINLLYWRDIK-QTGIVFGSLLL-LLFSLTQFSVVSVVAYLALAGLSATI 620
Query: 119 LF-LWSNASTFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASG 170
F ++ + + K+ P E+ + ++ + + L+ +N LR +
Sbjct: 621 SFRIYKSVLQAVQKTDEGHPFKAYLDMEMNLSQDQIQKYTDCLQLYVNSTVKELRRLFLV 680
Query: 171 RDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAE 230
+DL L +W+++ VG+ N LTL + V + T+PV+Y+KY+ ++D +
Sbjct: 681 QDLVDSLKFAVLMWLLTYVGALFNGLTLLIMAVVSMFTLPVVYDKYQAQIDQYL----GL 736
Query: 231 IKKQYAVFDAKVLSKIPRSLKDKKKA 256
++ AK+ +KIP + K+KA
Sbjct: 737 VRTHINTVVAKIQAKIPGA---KRKA 759
>UNIPROTKB|F1NCP4 [details] [associations]
symbol:Gga.4205 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001525 "angiogenesis" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0007413 "axonal
fasciculation" evidence=IEA] [GO:0021801 "cerebral cortex radial
glia guided migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0060317 "cardiac epithelial to mesenchymal transition"
evidence=IEA] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=IEA] [GO:2000172 "regulation of branching
morphogenesis of a nerve" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783 GO:GO:0005635
GO:GO:0030308 GO:GO:0043025 GO:GO:0030334 GO:GO:0042995
PANTHER:PTHR10994 GO:GO:0071786 GeneTree:ENSGT00390000009934
GO:GO:2000172 EMBL:AADN02044318 IPI:IPI00581683
Ensembl:ENSGALT00000013194 ArrayExpress:F1NCP4 Uniprot:F1NCP4
Length = 1190
Score = 154 (59.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 58 REKPV---HKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIV 114
+EKP L D+ WR+ K GV+ GA+ +++L L + ++++ + +
Sbjct: 987 KEKPTAVFSAKLNVSSVVDLLYWRDIK-KTGVVFGAS-LFLLLSLTVFSIVSVTAYIALA 1044
Query: 115 ALAVLF---LWSNASTFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLL 164
L+V ++ I KS P +V + EE + + +S + IN L
Sbjct: 1045 LLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESDVAVSEELIQKYSSVVLGHINGTVKEL 1104
Query: 165 REIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFS 224
R + DL L +WV + VG+ N LTL + + L +VPVIYE+++ ++D +
Sbjct: 1105 RRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYL 1164
Query: 225 EKAWAEIKKQYAVFDAKVLSKIPRSLKDK 253
+K A K+ +KIP LK K
Sbjct: 1165 GLVNKNVKDAMA----KIQAKIP-GLKRK 1188
>RGD|620988 [details] [associations]
symbol:Rtn3 "reticulon 3" species:10116 "Rattus norvegicus"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization"
evidence=IEA;ISO] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
RGD:620988 GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 GeneTree:ENSGT00390000009934
CTD:10313 eggNOG:NOG303514 HOVERGEN:HBG093922 EMBL:AY164698
EMBL:AY496443 EMBL:AF442357 EMBL:AF442358 EMBL:BC062068
EMBL:BC107448 IPI:IPI00421904 IPI:IPI00564622 RefSeq:NP_001009953.2
RefSeq:NP_543185.2 UniGene:Rn.11652 ProteinModelPortal:Q6RJR6
SMR:Q6RJR6 IntAct:Q6RJR6 STRING:Q6RJR6 PRIDE:Q6RJR6
Ensembl:ENSRNOT00000028785 Ensembl:ENSRNOT00000049812 GeneID:140945
KEGG:rno:140945 UCSC:RGD:620988 HOGENOM:HOG000154220 NextBio:620854
ArrayExpress:Q6RJR6 Genevestigator:Q6RJR6 Uniprot:Q6RJR6
Length = 940
Score = 152 (58.6 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 45/191 (23%), Positives = 94/191 (49%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K G + G T I +L L + ++++V + ++ L+V ++ + +
Sbjct: 754 DLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 811
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P ++ + E +A +N+A L+ + DL L +
Sbjct: 812 QKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 871
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N +TL + +L+ +VP++YEKY+ ++D + A + K ++ + K+
Sbjct: 872 MWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTK---SIVE-KI 927
Query: 243 LSKIPRSLKDK 253
+K+P K K
Sbjct: 928 QAKLPGIAKKK 938
>MGI|MGI:1339970 [details] [associations]
symbol:Rtn3 "reticulon 3" species:10090 "Mus musculus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=ISO]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 MGI:MGI:1339970
GO:GO:0016021 GO:GO:0006915 GO:GO:0000139 GO:GO:0016192
GO:GO:0005789 PANTHER:PTHR10994 GO:GO:0071786
GeneTree:ENSGT00390000009934 CTD:10313 eggNOG:NOG303514
OrthoDB:EOG4229M0 HOVERGEN:HBG093922 ChiTaRS:RTN3 EMBL:AB046114
EMBL:BK001796 EMBL:AY164700 EMBL:AY507126 EMBL:AY507127
EMBL:AY427822 EMBL:AY750849 EMBL:AF195940 EMBL:AK032109
EMBL:AK036892 EMBL:AK049845 EMBL:AK075883 EMBL:AK088670
EMBL:AK146505 EMBL:AK148792 EMBL:AK148947 EMBL:AK165683
EMBL:BC014697 EMBL:BC036717 EMBL:BC079882 IPI:IPI00112948
IPI:IPI00470981 IPI:IPI00474993 IPI:IPI00480414 IPI:IPI00750847
RefSeq:NP_001003933.1 RefSeq:NP_001003934.1 RefSeq:NP_001258415.1
RefSeq:NP_001258416.1 RefSeq:NP_444306.1 UniGene:Mm.246990
ProteinModelPortal:Q9ES97 SMR:Q9ES97 IntAct:Q9ES97 STRING:Q9ES97
PhosphoSite:Q9ES97 PaxDb:Q9ES97 PRIDE:Q9ES97
Ensembl:ENSMUST00000025667 Ensembl:ENSMUST00000065304
Ensembl:ENSMUST00000088169 Ensembl:ENSMUST00000088171 GeneID:20168
KEGG:mmu:20168 UCSC:uc008glb.1 UCSC:uc008gld.1 UCSC:uc008gle.1
UCSC:uc012bhv.1 InParanoid:Q9ES97 OMA:LTRQFSH NextBio:297685
Bgee:Q9ES97 CleanEx:MM_RTN3 Genevestigator:Q9ES97
GermOnline:ENSMUSG00000024758 Uniprot:Q9ES97
Length = 964
Score = 152 (58.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 45/191 (23%), Positives = 94/191 (49%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K G + G T I +L L + ++++V + ++ L+V ++ + +
Sbjct: 778 DLIFWRDVK-KTGFVFGTTLI-MLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 835
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P ++ + E +A +N+A L+ + DL L +
Sbjct: 836 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 895
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N +TL + +L+ +VP++YEKY+ ++D + A + K ++ + K+
Sbjct: 896 MWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIARDQTK---SIVE-KI 951
Query: 243 LSKIPRSLKDK 253
+K+P K K
Sbjct: 952 QAKLPGIAKKK 962
>UNIPROTKB|A7MC64 [details] [associations]
symbol:rtn1 "Reticulon-1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
GO:GO:0016021 GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994
HOVERGEN:HBG008971 CTD:6252 eggNOG:NOG306139
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:BC118846
EMBL:BC152060 EMBL:AL635298 EMBL:BK004008 RefSeq:NP_001078819.2
UniGene:Str.40113 ProteinModelPortal:A7MC64 SMR:A7MC64
STRING:A7MC64 Ensembl:ENSXETT00000037003 GeneID:677736
KEGG:xtr:677736 Xenbase:XB-GENE-1011333 Bgee:A7MC64 Uniprot:A7MC64
Length = 764
Score = 147 (56.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 46/205 (22%), Positives = 100/205 (48%)
Query: 60 KPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA-- 117
KP+ L K ++ WR+ K G++ G+ + +LF L ++ +++++ + + AL+
Sbjct: 568 KPL-PFLSKRKAIELLYWRDIK-QTGIVFGSVLL-MLFSLTQFSVVSVIAYLALAALSAT 624
Query: 118 VLF-LWSNASTFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIAS 169
+ F ++ + + K+ P E+ + +E + + L+ N LR +
Sbjct: 625 ISFRIYKSVLQAVQKTDEGHPFKSYLDMEISLSQEQIQKYTDCLQAYTNSIVKELRRLFL 684
Query: 170 GRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWA 229
+DL L +W+++ VG+ N LTL + V + ++PV+Y+KY+ ++D +
Sbjct: 685 VQDLVDSLKFAVLMWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQYL----G 740
Query: 230 EIKKQYAVFDAKVLSKIPRSLKDKK 254
++ K+ +KIP + K K+
Sbjct: 741 LVRTNMNTIVTKIQAKIPGT-KQKE 764
>ZFIN|ZDB-GENE-030710-2 [details] [associations]
symbol:rtn4b "reticulon 4b" species:7955 "Danio
rerio" [GO:0005199 "structural constituent of cell wall"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 InterPro:IPR003882 Pfam:PF02453 PRINTS:PR01218
PROSITE:PS50845 ZFIN:ZDB-GENE-030710-2 GO:GO:0005783 GO:GO:0005199
PANTHER:PTHR10994 EMBL:AY555051 IPI:IPI00650525
RefSeq:NP_001035425.1 UniGene:Dr.79909 ProteinModelPortal:Q4G5V0
PRIDE:Q4G5V0 GeneID:678586 KEGG:dre:678586 CTD:678586
HOVERGEN:HBG096757 InParanoid:Q4G5V0 NextBio:20902411 Bgee:Q4G5V0
Uniprot:Q4G5V0
Length = 875
Score = 147 (56.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 50/197 (25%), Positives = 85/197 (43%)
Query: 69 GKPAD------VFLWRNKKISAGVLGGATAIWVLFQLLEY-HLLTLVCHCLIVALAVLFL 121
G PAD + WR+ + SA VLG + + +L+ CL+ +
Sbjct: 680 GAPADPTAVLQLLYWRDVRASALVLGSLLLLLLFLSCCSVISVLSYSALCLLTLTLSTRV 739
Query: 122 WSNASTFINKSPPRIP-EVYIPEEPVLQL------ASALRFEINRAFTLLREIASGRDLK 174
++ + K+ P Y+ + +L + AL IN A LR + DL
Sbjct: 740 FTAVLQAMRKTEDGHPFRQYLERDVLLSADAVHTHSEALLRRINTALVELRRLFLVEDLV 799
Query: 175 KFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQ 234
L + GLW+++ VGSW N LTL I + + P+ YE+++ +D F ++++
Sbjct: 800 DSLKLAVGLWLLTYVGSWFNGLTLLIIALIGAFSGPIAYERHQSEIDQFISMINTQMREA 859
Query: 235 YAVFDAKVLSKIPRSLK 251
KVL+ +P K
Sbjct: 860 LG----KVLAMVPGGKK 872
>ZFIN|ZDB-GENE-030131-2426 [details] [associations]
symbol:rtn1a "reticulon 1a" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 ZFIN:ZDB-GENE-030131-2426 GO:GO:0005783
PANTHER:PTHR10994 HOVERGEN:HBG008971 GeneTree:ENSGT00390000009934
EMBL:BX072537 EMBL:AY555044 IPI:IPI00613432 RefSeq:NP_001025138.2
UniGene:Dr.77106 SMR:Q4G5V7 Ensembl:ENSDART00000076574
GeneID:323706 KEGG:dre:323706 CTD:323706 InParanoid:Q4G5V7
OMA:ISHGEER NextBio:20808397 Uniprot:Q4G5V7
Length = 818
Score = 145 (56.1 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 42/192 (21%), Positives = 91/192 (47%)
Query: 70 KPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--VLF-LWSNAS 126
K D+ WR+ K S V G + + +LF L ++ +++++ + + L+ + F ++ +
Sbjct: 631 KVVDLVHWRDLKQSGLVFG--SVLLLLFSLTQFSVVSVIAYLALAVLSATISFRVYKSVL 688
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
+ K+ P E+ + + + + + IN LR + +DL +
Sbjct: 689 QAVQKTDEGHPFKSYLEVEISLSADQISKYVDKTQLYINTTMKELRRLFLVQDLVDSIKF 748
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+W+++ VG+ N LTL + + + +VPV+YEKY+ ++D + ++ Q
Sbjct: 749 AVLMWLLTYVGALFNGLTLLILAVISMFSVPVVYEKYQTQIDQYL----GLVRTQVNSVM 804
Query: 240 AKVLSKIPRSLK 251
K+ K+P + K
Sbjct: 805 GKIREKVPGAKK 816
>ZFIN|ZDB-GENE-030710-1 [details] [associations]
symbol:rtn4a "reticulon 4a" species:7955 "Danio
rerio" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0002040 "sprouting angiogenesis"
evidence=IMP] [GO:0007411 "axon guidance" evidence=IGI;IMP]
[GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IMP] InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845
ZFIN:ZDB-GENE-030710-1 GO:GO:0005783 GO:GO:0007411 GO:GO:0002040
GO:GO:0048936 PANTHER:PTHR10994 HOVERGEN:HBG000838
GeneTree:ENSGT00390000009934 HOGENOM:HOG000015254 EMBL:BX324134
EMBL:AY555039 IPI:IPI00650155 RefSeq:NP_001073381.1
UniGene:Dr.121711 UniGene:Dr.47577 SMR:Q4G5W2 STRING:Q4G5W2
Ensembl:ENSDART00000081966 GeneID:447816 KEGG:dre:447816 CTD:447816
InParanoid:Q4G5W2 NextBio:20832340 Uniprot:Q4G5W2
Length = 322
Score = 139 (54.0 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 55/205 (26%), Positives = 94/205 (45%)
Query: 59 EKPV---HKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVA 115
EKP +K ++ WR+ + GV+ GA LF LL + +++ VA
Sbjct: 120 EKPTVAPYKCNSSCSLVELLYWRDLQ-RTGVVFGAG----LFLLLSLSMCSIISVLSYVA 174
Query: 116 LAVL-----F-LWSNASTFINKSPPRIP-EVYI------PEEPVLQLASALRFEINRAFT 162
LA+L F ++ + KS P ++Y+ P E V + + + IN
Sbjct: 175 LALLSVTVSFRIYKGILQAVQKSEDGHPFKMYLDKDTALPAEMVHKYSDSTLVHINTVIK 234
Query: 163 LLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDS 222
LR + DL L +W+++ VG+ N LTL + F+ + PVIYEK++ ++D
Sbjct: 235 ELRRLFLVEDLVDSLKFAVLMWILTYVGALFNGLTLIILGFIGAFSCPVIYEKHQAQIDH 294
Query: 223 FSEKAWAEIKKQYAVFDAKVLSKIP 247
+ + + KQ+ K+ +KIP
Sbjct: 295 Y----YGLVNKQFKDVVGKIQAKIP 315
>UNIPROTKB|Q5MY90 [details] [associations]
symbol:rtn1-b "Reticulon-1-B" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0016021
GO:GO:0005634 GO:GO:0005789 PANTHER:PTHR10994 EMBL:AY484582
EMBL:AF498369 EMBL:BC084108 EMBL:CD326067 EMBL:BK004058
RefSeq:NP_001089011.1 UniGene:Xl.8555 ProteinModelPortal:Q5MY90
SMR:Q5MY90 GeneID:496397 KEGG:xla:496397 CTD:496397
Xenbase:XB-GENE-1011340 HOVERGEN:HBG008971 Uniprot:Q5MY90
Length = 752
Score = 144 (55.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 43/195 (22%), Positives = 95/195 (48%)
Query: 70 KPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA--VLF-LWSNAS 126
K D+ WR+ K G++ G+ + +LF L + +++++ + + AL+ + F ++ +
Sbjct: 565 KAIDLLYWRDVK-QTGIVFGSILL-MLFSLTLFSVVSVIAYLALAALSATISFRIYKSVL 622
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
+ K+ P E+ + +E + + + N LR + +DL L
Sbjct: 623 QAVQKTDEGHPFKSYLDIEISLSQEQIQKYTGCFQLYTNSIAKELRRLFLVQDLVDSLKF 682
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+W+++ VG+ N LTL + V + ++PV+Y+KY+ ++D + ++ +
Sbjct: 683 AVLMWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQYL----GLVRTNMNIIV 738
Query: 240 AKVLSKIPRSLKDKK 254
K+ +KIP + K K+
Sbjct: 739 TKIQAKIPGT-KQKE 752
>TAIR|locus:2057786 [details] [associations]
symbol:3BETAHSD/D2
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;ISS] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IGI;IDA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0019745
"pentacyclic triterpenoid biosynthetic process" evidence=RCA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC004484
GO:GO:0047012 EMBL:DQ302749 EMBL:BX818951 EMBL:AK176177
IPI:IPI00540500 IPI:IPI00657508 IPI:IPI00929941 PIR:C84658
RefSeq:NP_001031422.1 RefSeq:NP_180194.2 UniGene:At.38921
ProteinModelPortal:Q67ZE1 SMR:Q67ZE1 PaxDb:Q67ZE1 PRIDE:Q67ZE1
EnsemblPlants:AT2G26260.1 GeneID:817166 KEGG:ath:AT2G26260
TAIR:At2g26260 InParanoid:Q67ZE1 OMA:DTLLWKD PhylomeDB:Q67ZE1
ProtClustDB:CLSN2716544 Genevestigator:Q67ZE1 Uniprot:Q67ZE1
Length = 564
Score = 132 (51.5 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 51/195 (26%), Positives = 90/195 (46%)
Query: 58 REKP--VHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVA 115
RE P ++LGGGK AD LW++ K + + +I+ F ++T + L+VA
Sbjct: 369 REGPSKASRILGGGKVADTLLWKDLKQTLIAIFILISIYYNFVATGSTVVTALSKALLVA 428
Query: 116 LAVLFLWSNASTFI-NKSPPRIP--EVYIPEEPVLQLASALRFEINRAFTLLREIASGRD 172
LFL I + +IP + ++ ++ L+ ++ N LR + G D
Sbjct: 429 SVFLFLHGILPEKIFGYTVEKIPASQFHLSKDSSHDLSLSVISSWNTTVKALRSLCQGND 488
Query: 173 LKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSF--SEKAWAE 230
F V+ L +S+ G+ + ++F I + ++YEK E +DS S K++A
Sbjct: 489 WSFFFKVVFVLLALSLAGA-ISLHSIFVIGLPIAFLAFLVYEKKEQEIDSIVVSFKSFA- 546
Query: 231 IKKQYAVFDAKVLSK 245
K + V++ SK
Sbjct: 547 CKHKSDVYEKLFGSK 561
>UNIPROTKB|K7EMR7 [details] [associations]
symbol:RTN2 "Reticulon-2" species:9606 "Homo sapiens"
[GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 EMBL:CH471126
EMBL:AC138534 PANTHER:PTHR10994 HGNC:HGNC:10468
Ensembl:ENST00000590526 Uniprot:K7EMR7
Length = 271
Score = 119 (46.9 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 42/190 (22%), Positives = 86/190 (45%)
Query: 68 GGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA---VLFLWSN 124
G K AD+ W++ + S V G L LL + ++++ H ++ L L ++
Sbjct: 68 GSKVADLLYWKDTRTSGVVFTGLMVS--LLCLLHFSIVSVAAHLALLLLCGTISLRVYRK 125
Query: 125 ASTFINKSPPRIP-EVYIPEEPVL------QLASALRFEINRAFTLLREIASGRDLKKFL 177
+++ P + Y+ + L +L+ + + A T LR DL L
Sbjct: 126 VLQAVHRGDGANPFQAYLDVDLTLTREQTERLSHQITSRVVSAATQLRHFFLVEDLVDSL 185
Query: 178 SVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAV 237
+ ++++ VG+ N LTL + + L T+P++Y +++ ++D + + Q +
Sbjct: 186 KLALLFYILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYV----GLVTNQLSH 241
Query: 238 FDAKVLSKIP 247
AK+ +KIP
Sbjct: 242 IKAKIRAKIP 251
>MGI|MGI:107612 [details] [associations]
symbol:Rtn2 "reticulon 2 (Z-band associated protein)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR003388 Pfam:PF02453
PROSITE:PS50845 MGI:MGI:107612 GO:GO:0016021 GO:GO:0005789
EMBL:AF093624 PANTHER:PTHR10994 HOGENOM:HOG000015254 CTD:6253
eggNOG:NOG250449 HOVERGEN:HBG099866 OMA:REPITGQ OrthoDB:EOG4FJ88W
EMBL:AF038537 EMBL:AF038538 EMBL:AF038539 EMBL:BC031370
IPI:IPI00120427 IPI:IPI00229453 RefSeq:NP_001020535.1
RefSeq:NP_038676.1 UniGene:Mm.24142 ProteinModelPortal:O70622
SMR:O70622 STRING:O70622 PhosphoSite:O70622 PaxDb:O70622
PRIDE:O70622 Ensembl:ENSMUST00000032559 Ensembl:ENSMUST00000108468
GeneID:20167 KEGG:mmu:20167 InParanoid:O70622 NextBio:297679
Bgee:O70622 CleanEx:MM_RTN2 Genevestigator:O70622
GermOnline:ENSMUSG00000030401 Uniprot:O70622
Length = 471
Score = 121 (47.7 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 42/186 (22%), Positives = 84/186 (45%)
Query: 72 ADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAV---LFLWSNASTF 128
AD+ W++ + S V G A L LL + ++++ H ++ L L ++
Sbjct: 273 ADLLYWKDTRTSGAVFTGLMAS--LLCLLHFSIVSVAAHLALLGLCATISLRVYRKVLQA 330
Query: 129 INKSPPRIP-EVYIPEEPVL------QLASALRFEINRAFTLLREIASGRDLKKFLSVIA 181
+++ P + Y+ + L +L+ + + T LR DL L +
Sbjct: 331 VHRGDGTNPFQAYLDMDLTLTREQTERLSQQIASHVVSTATQLRHFFLVEDLVDSLKLAL 390
Query: 182 GLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAK 241
++++ VG+ N LTL + V L TVP++Y +++ ++D + + Q + AK
Sbjct: 391 LFYILTFVGAIFNGLTLVILGVVALFTVPLLYRQHQAQIDQYV----GLVTNQLSHIKAK 446
Query: 242 VLSKIP 247
+ +KIP
Sbjct: 447 IRAKIP 452
>RGD|1303245 [details] [associations]
symbol:Rtn2 "reticulon 2" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=ISO]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 RGD:1303245
GO:GO:0005783 PANTHER:PTHR10994 CTD:6253 eggNOG:NOG250449
HOGENOM:HOG000119393 HOVERGEN:HBG099866 OMA:REPITGQ
OrthoDB:EOG4FJ88W IPI:IPI00409538 EMBL:BC129079 EMBL:AY279211
EMBL:BK001788 RefSeq:NP_963856.1 UniGene:Rn.3210 STRING:Q6WN19
GeneID:308410 KEGG:rno:308410 UCSC:RGD:1303245 InParanoid:Q6WN19
NextBio:658806 Genevestigator:Q6WN19 Uniprot:Q6WN19
Length = 469
Score = 120 (47.3 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 41/186 (22%), Positives = 84/186 (45%)
Query: 72 ADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAV---LFLWSNASTF 128
AD+ W++ + S + G A L LL + ++++ H ++ L L ++
Sbjct: 271 ADLLYWKDTRTSGAIFTGLMAS--LLCLLHFSIVSVAAHLALLGLCATISLRVYRKVLQA 328
Query: 129 INKSPPRIP-EVYIPEEPVL------QLASALRFEINRAFTLLREIASGRDLKKFLSVIA 181
+++ P + Y+ + L +L+ + + T LR DL L +
Sbjct: 329 VHRGDGTNPFQAYLDMDLTLTREQTERLSQQIASHVVSTATQLRHFFLVEDLVDSLKLAL 388
Query: 182 GLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAK 241
++++ VG+ N LTL + V L TVP++Y +++ ++D + + Q + AK
Sbjct: 389 LFYILTFVGAIFNGLTLVILGVVALFTVPLLYRQHQAQIDQYV----GLVTSQLSHIKAK 444
Query: 242 VLSKIP 247
+ +KIP
Sbjct: 445 IRAKIP 450
>UNIPROTKB|F1LM00 [details] [associations]
symbol:Rtn2 "Protein Rtn2" species:10116 "Rattus
norvegicus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 RGD:1303245
GO:GO:0005783 PANTHER:PTHR10994 GeneTree:ENSGT00390000009934
IPI:IPI00409538 Ensembl:ENSRNOT00000022528 ArrayExpress:F1LM00
Uniprot:F1LM00
Length = 470
Score = 120 (47.3 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 41/186 (22%), Positives = 84/186 (45%)
Query: 72 ADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAV---LFLWSNASTF 128
AD+ W++ + S + G A L LL + ++++ H ++ L L ++
Sbjct: 272 ADLLYWKDTRTSGAIFTGLMAS--LLCLLHFSIVSVAAHLALLGLCATISLRVYRKVLQA 329
Query: 129 INKSPPRIP-EVYIPEEPVL------QLASALRFEINRAFTLLREIASGRDLKKFLSVIA 181
+++ P + Y+ + L +L+ + + T LR DL L +
Sbjct: 330 VHRGDGTNPFQAYLDMDLTLTREQTERLSQQIASHVVSTATQLRHFFLVEDLVDSLKLAL 389
Query: 182 GLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAK 241
++++ VG+ N LTL + V L TVP++Y +++ ++D + + Q + AK
Sbjct: 390 LFYILTFVGAIFNGLTLVILGVVALFTVPLLYRQHQAQIDQYV----GLVTSQLSHIKAK 445
Query: 242 VLSKIP 247
+ +KIP
Sbjct: 446 IRAKIP 451
>FB|FBgn0053113 [details] [associations]
symbol:Rtnl1 "Reticulon-like1" species:7227 "Drosophila
melanogaster" [GO:0042048 "olfactory behavior" evidence=IMP]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0044432 "endoplasmic reticulum part"
evidence=IDA] [GO:0005790 "smooth endoplasmic reticulum"
evidence=IDA] [GO:0045169 "fusome" evidence=IDA] [GO:0002121
"inter-male aggressive behavior" evidence=IMP] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 EMBL:AE014134 GO:GO:0005811
GO:GO:0002121 GO:GO:0042048 GO:GO:0045169 GO:GO:0005790
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934
RefSeq:NP_001162875.1 UniGene:Dm.1559 ProteinModelPortal:E1JHT6
SMR:E1JHT6 EnsemblMetazoa:FBtr0301538 GeneID:33721
KEGG:dme:Dmel_CG33113 CTD:33721 FlyBase:FBgn0053113 OMA:YFANEQK
PhylomeDB:E1JHT6 GenomeRNAi:33721 NextBio:784952 Bgee:E1JHT6
GO:GO:0044432 Uniprot:E1JHT6
Length = 607
Score = 121 (47.7 bits), Expect = 0.00010, P = 0.00010
Identities = 39/156 (25%), Positives = 74/156 (47%)
Query: 77 WRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVAL--AVLF-LWSNASTFINKSP 133
WR+ K S G++ GA I L + + ++++ + ++ L V F ++ + + + K+
Sbjct: 417 WRDVKKS-GIVFGAGLI-TLAAISSFSVISVFAYLSLLTLFGTVAFRIYKSVTQAVQKTN 474
Query: 134 PRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVV 186
P ++ + E V +A IN + LR + D+ + LWV
Sbjct: 475 EGHPFKDYLELDLTLSHEKVQNIAGVAVAHINGFISELRRLFLVEDIIDSIKFGVILWVF 534
Query: 187 SIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDS 222
+ VG+W N +TL + FV L T+P +YE + +D+
Sbjct: 535 TYVGAWFNGMTLVILAFVSLFTLPKVYENNKQSIDT 570
>UNIPROTKB|G3X7U3 [details] [associations]
symbol:LOC100847649 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 EMBL:DAAA02063501
Ensembl:ENSBTAT00000046142 Uniprot:G3X7U3
Length = 74
Score = 97 (39.2 bits), Expect = 0.00012, P = 0.00012
Identities = 20/71 (28%), Positives = 44/71 (61%)
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N +TL + +L+ ++P++YEKY+ ++D + A + K ++ + K+
Sbjct: 6 MWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIARDQTK---SIVE-KI 61
Query: 243 LSKIPRSLKDK 253
+K+P K K
Sbjct: 62 QAKLPGIAKKK 72
>UNIPROTKB|O75298 [details] [associations]
symbol:RTN2 "Reticulon-2" species:9606 "Homo sapiens"
[GO:0008219 "cell death" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=NAS] [GO:0004871 "signal
transducer activity" evidence=NAS] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0008219
GO:GO:0004871 GO:GO:0030176 PANTHER:PTHR10994 EMBL:AF004222
EMBL:AF004223 EMBL:AF004224 EMBL:AF038540 EMBL:BK001686
EMBL:BK001687 EMBL:BK001688 IPI:IPI00024983 IPI:IPI00216112
IPI:IPI00410134 RefSeq:NP_005610.1 RefSeq:NP_996783.1
RefSeq:NP_996784.1 UniGene:Hs.47517 ProteinModelPortal:O75298
SMR:O75298 IntAct:O75298 STRING:O75298 PhosphoSite:O75298
PaxDb:O75298 PRIDE:O75298 Ensembl:ENST00000245923
Ensembl:ENST00000344680 Ensembl:ENST00000430715 GeneID:6253
KEGG:hsa:6253 UCSC:uc002pcb.3 UCSC:uc002pcc.3 CTD:6253
GeneCards:GC19M045988 HGNC:HGNC:10468 HPA:HPA034941 MIM:603183
MIM:604805 neXtProt:NX_O75298 Orphanet:100993 PharmGKB:PA34881
eggNOG:NOG250449 HOGENOM:HOG000119393 HOVERGEN:HBG099866
InParanoid:O75298 OMA:REPITGQ OrthoDB:EOG4FJ88W PhylomeDB:O75298
ChiTaRS:RTN2 GenomeRNAi:6253 NextBio:24285 Bgee:O75298
CleanEx:HS_RTN2 Genevestigator:O75298 GermOnline:ENSG00000125744
Uniprot:O75298
Length = 545
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 42/190 (22%), Positives = 86/190 (45%)
Query: 68 GGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALA---VLFLWSN 124
G K AD+ W++ + S V G L LL + ++++ H ++ L L ++
Sbjct: 342 GSKVADLLYWKDTRTSGVVFTGLMVS--LLCLLHFSIVSVAAHLALLLLCGTISLRVYRK 399
Query: 125 ASTFINKSPPRIP-EVYIPEEPVL------QLASALRFEINRAFTLLREIASGRDLKKFL 177
+++ P + Y+ + L +L+ + + A T LR DL L
Sbjct: 400 VLQAVHRGDGANPFQAYLDVDLTLTREQTERLSHQITSRVVSAATQLRHFFLVEDLVDSL 459
Query: 178 SVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAV 237
+ ++++ VG+ N LTL + + L T+P++Y +++ ++D + + Q +
Sbjct: 460 KLALLFYILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYV----GLVTNQLSH 515
Query: 238 FDAKVLSKIP 247
AK+ +KIP
Sbjct: 516 IKAKIRAKIP 525
>TAIR|locus:2058223 [details] [associations]
symbol:AT2G43420 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;ISS] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA;ISS]
[GO:0016616 "oxidoreductase activity, acting on the CH-OH group of
donors, NAD or NADP as acceptor" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005886 GO:GO:0009506 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 HOGENOM:HOG000167989
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0016126 EMBL:AC002335 GO:GO:0047012 UniGene:At.12188
EMBL:DQ415280 EMBL:AK117930 EMBL:AY045841 IPI:IPI00543388
PIR:H84865 RefSeq:NP_565998.1 UniGene:At.59216
ProteinModelPortal:A9X4U2 SMR:A9X4U2 PaxDb:A9X4U2 PRIDE:A9X4U2
EnsemblPlants:AT2G43420.1 GeneID:818943 KEGG:ath:AT2G43420
TAIR:At2g43420 InParanoid:Q94AR9 OMA:HAHICAA PhylomeDB:A9X4U2
ProtClustDB:CLSN2688905 Genevestigator:A9X4U2 Uniprot:A9X4U2
Length = 561
Score = 119 (46.9 bits), Expect = 0.00016, P = 0.00016
Identities = 48/160 (30%), Positives = 72/160 (45%)
Query: 64 KVLGGGKPADVFLWRNKK---ISAGVLGGATAIWVLFQLLEY-HLLTLVCHCLIVAL-AV 118
++LG GK AD+ LWRN+K +S VL W F + + VAL V
Sbjct: 372 QLLGCGKVADILLWRNEKKTFVSFLVLN-LFYYWFFFSGNTFTSSAAQLLFIFAVALYGV 430
Query: 119 LFLWSNASTF-INKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFL 177
F+ S F +NK PP E I E V L+S + N+ + ++SG D KF
Sbjct: 431 SFVPSKIFGFQVNKIPPWRFE--ISESAVRDLSSDIVVVWNQGVRSFKSLSSGGDWIKFF 488
Query: 178 SVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYE 217
+ L+++ ++ S + + V T IYE+YE
Sbjct: 489 KIAGSLYLLKLIVSR-SLAAFLFTVMSFSFTGFFIYEQYE 527
>WB|WBGene00004336 [details] [associations]
symbol:ret-1 species:6239 "Caenorhabditis elegans"
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR003388
Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
GeneTree:ENSGT00550000074593 PANTHER:PTHR10994 EMBL:Z78066
GeneID:179981 KEGG:cel:CELE_W06A7.3 CTD:179981 NextBio:907638
EMBL:Z78067 RefSeq:NP_001123026.1 ProteinModelPortal:G5EDI2
SMR:G5EDI2 IntAct:G5EDI2 EnsemblMetazoa:W06A7.3f WormBase:W06A7.3f
OMA:EITQNDD Uniprot:G5EDI2
Length = 3303
Score = 131 (51.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 54/199 (27%), Positives = 93/199 (46%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKS 132
DV WR+ K SA VL + A+ VLF L +Y LLT+V + L++AL + + + K
Sbjct: 3106 DVIYWRDAKKSAIVL--SLALLVLFVLAKYPLLTVVTYSLLLALGAAAGFRSIFSVFKKV 3163
Query: 133 PPRIPEVYIPEEPVLQ-LASALRF---EINRAFTLLREIAS--GRDLKKFL-------SV 179
+I + E P + LA L +++ + E A+ LKK + S+
Sbjct: 3164 EAQIKKTD-SEHPFSEILAQDLTLPQEKVHAQADVFVEHATCIANKLKKLVFVESPLESI 3222
Query: 180 IAGL--WVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAV 237
GL W ++ + SW + TL + + + +VP +YE ++ +D +K +
Sbjct: 3223 KFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDPHLATISGHLKNVQNI 3282
Query: 238 FDAKV--LSKIPRSLKDKK 254
D K+ L P + ++KK
Sbjct: 3283 IDEKLPFLRSAPVAAEEKK 3301
Score = 38 (18.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 4 EHKHEEPAGESVMEKITEKI 23
E E+ AG +V+EK T I
Sbjct: 1929 EDAPEKSAGGTVIEKFTSMI 1948
Score = 37 (18.1 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 3 DEHKHEEPAGESVMEKITEKI 23
DE E+P +++ T KI
Sbjct: 1569 DEAAQEDPTDPETVDETTSKI 1589
>UNIPROTKB|F6S165 [details] [associations]
symbol:RTN2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR003388 Pfam:PF02453 PROSITE:PS50845 GO:GO:0005783
PANTHER:PTHR10994 GeneTree:ENSGT00390000009934 OMA:REPITGQ
EMBL:DAAA02047375 IPI:IPI00842729 Ensembl:ENSBTAT00000043635
Uniprot:F6S165
Length = 541
Score = 114 (45.2 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 43/191 (22%), Positives = 88/191 (46%)
Query: 68 GGKPADVFLWRNKKISAGVLGGATAIWV-LFQLLEYHLLTLVCHCLIVALA---VLFLWS 123
G K D+ W++ K S GV+ T + V L LL + ++++ H ++ L L ++
Sbjct: 338 GSKVVDLLHWKDAKTS-GVV--FTCLMVSLLSLLHFSIVSVAAHVALLLLCGTISLRVYR 394
Query: 124 NASTFINKSPPRIP-EVYIP------EEPVLQLASALRFEINRAFTLLREIASGRDLKKF 176
+++ P + Y+ +E +L+ + + A LR DL
Sbjct: 395 KVLQAVHRGDGANPFQAYLDVDLTLTQEQTERLSQQIASRVVSAAIQLRHFFLVEDLVDS 454
Query: 177 LSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYA 236
L + ++++ VG+ N LTL + + + TVP++Y +++ ++D + + Q +
Sbjct: 455 LKLALLFYILTFVGAVFNGLTLLILGVIGVFTVPLLYRQHQAQIDQYV----GLVTNQLS 510
Query: 237 VFDAKVLSKIP 247
AK+ +KIP
Sbjct: 511 HIKAKIRAKIP 521
Score = 38 (18.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 1 MADEHKHEEPAGESVMEKIT 20
+ DE K EEP G+ E IT
Sbjct: 232 LPDE-KEEEPWGQLEREPIT 250
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.139 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 256 235 0.00088 113 3 11 22 0.36 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 72
No. of states in DFA: 606 (64 KB)
Total size of DFA: 190 KB (2107 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.66u 0.11s 18.77t Elapsed: 00:00:02
Total cpu time: 18.67u 0.11s 18.78t Elapsed: 00:00:02
Start: Fri May 10 04:44:29 2013 End: Fri May 10 04:44:31 2013