BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039009
(256 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SUT9|RTNLB_ARATH Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1
SV=1
Length = 271
Score = 342 bits (878), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 188/270 (69%), Positives = 222/270 (82%), Gaps = 15/270 (5%)
Query: 1 MADEHKHEE------PA-----GESVMEKITEKIHGHDSSSSSSSSDTDDDKKSSTSSLK 49
MADEHKHEE PA ES+MEK++EKIH SSSSSSSD +++KKSS+SS K
Sbjct: 1 MADEHKHEESSPNLDPAVEVVERESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPK 60
Query: 50 TK---VFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLT 106
+ V+RLFGRE+PVHKVLGGGKPAD+F+W++KK+S GV GGAT WVLF+L+EYHLLT
Sbjct: 61 SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLT 120
Query: 107 LVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLRE 166
L+CH +IVALAVLFLWSNA+ FI+KSPP+IPEV+IPEEP+LQLAS LR EINR + LRE
Sbjct: 121 LLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLRE 180
Query: 167 IASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEK 226
IASGRD+KKFLS IAGLWV+SI+G +FLTL YI VLL TVP+ Y+KYED+VDS+ EK
Sbjct: 181 IASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEK 240
Query: 227 AWAEIKKQYAVFDAKVLSKIPRS-LKDKKK 255
A AE+KKQYAV DAKV SKIPR LKDKKK
Sbjct: 241 AMAELKKQYAVLDAKVFSKIPRGPLKDKKK 270
>sp|Q9SH59|RTNLC_ARATH Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1
SV=1
Length = 255
Score = 337 bits (864), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 175/246 (71%), Positives = 203/246 (82%), Gaps = 7/246 (2%)
Query: 1 MADEHKHEEPAGESVMEKITEKIHGHDSSSSSSSSDTDDDKKSSTSSLKTKVFRLFGREK 60
MA+EHKHEE S+MEKI+EKIHGHD SSSSSS +++SLKTK++RLFGRE+
Sbjct: 1 MAEEHKHEE----SIMEKISEKIHGHDDSSSSSSDSD---DDKNSASLKTKIYRLFGREQ 53
Query: 61 PVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF 120
P+HK+ GGGKPAD+FLWRNKK+S GVLG AT W+LF+LLEY+LLTL H I+ALAVLF
Sbjct: 54 PLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLF 113
Query: 121 LWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVI 180
LWS+ASTFI+KSP IPEV+IPE+ VLQLAS LR EINR FT+LR+IASGRDLKKFL VI
Sbjct: 114 LWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVI 173
Query: 181 AGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDA 240
AGLWV+S VGS CNFLTL YI VLL T+PV+YEKYED+VD F EKA EIKKQY FD
Sbjct: 174 AGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDV 233
Query: 241 KVLSKI 246
KVLSK+
Sbjct: 234 KVLSKV 239
>sp|Q9SUR3|RTNLA_ARATH Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1
SV=1
Length = 275
Score = 331 bits (849), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 182/274 (66%), Positives = 213/274 (77%), Gaps = 19/274 (6%)
Query: 1 MADEHKHEE------PA-----GESVMEKITEKIHGHDSSSSSSSSDTDDDKKSSTSSLK 49
MA+EHKH+E PA ES+M+KI+EKIH SSSSSSS D+D+K T
Sbjct: 1 MAEEHKHDESVIAPEPAVEVVERESLMDKISEKIHHGGDSSSSSSSSDDEDEKKKTKKPS 60
Query: 50 TK-------VFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEY 102
+ V+RLFGRE+PVHKVLGGGKPAD+F+W+NKK+S GVLGGATA WV+F+L+EY
Sbjct: 61 SPSSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEY 120
Query: 103 HLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFT 162
HLLTL+CH +IV LAVLFLWSNA+ FINKSPP+IPEV+IPEEP+LQLAS LR EINR F+
Sbjct: 121 HLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFS 180
Query: 163 LLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDS 222
LREIASGRDLKKFL IAGLWV+SI+G NFLTL YI VLL TVP+ Y+KYED+VD
Sbjct: 181 SLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDP 240
Query: 223 FSEKAWAEIKKQYAVFDAKVLSKIPRS-LKDKKK 255
EKA E+KKQYAV D KVLSKIP LK+KKK
Sbjct: 241 LGEKAMIELKKQYAVLDEKVLSKIPLGPLKNKKK 274
>sp|O82352|RTNLE_ARATH Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1
SV=1
Length = 255
Score = 330 bits (845), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 167/256 (65%), Positives = 207/256 (80%), Gaps = 4/256 (1%)
Query: 1 MADEHKHEEPAGESVMEKITEKIHGHDSSSSSSSSDTDDDKKSSTSSLKTKVFRLFGREK 60
MA+E + P ES+MEKI+EKIH HDSSSSS S +K S S++K K++R+FGREK
Sbjct: 1 MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEY---EKPDSPSAVKAKIYRMFGREK 57
Query: 61 PVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF 120
PVHKVLGGGKPADVFLWR+KK+S VLG ATAIWVLF+L+EYHLL+L+CH I+AL LF
Sbjct: 58 PVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLF 117
Query: 121 LWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVI 180
LWSNA T INK+ P+IPE+++PEE L +AS+LR E+N+AF +LR IA GRDLKKFL V+
Sbjct: 118 LWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVV 177
Query: 181 AGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDA 240
GLW++S+VG+W NFLTL YI FV+LHTVP++YEK+ED+VD +EKA E++KQY VFD
Sbjct: 178 VGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDE 237
Query: 241 KVLSKIP-RSLKDKKK 255
KVLSKIP SLK K K
Sbjct: 238 KVLSKIPIASLKAKAK 253
>sp|Q9FFS0|RTNLD_ARATH Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1
SV=1
Length = 257
Score = 326 bits (835), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 175/260 (67%), Positives = 201/260 (77%), Gaps = 9/260 (3%)
Query: 1 MADEHKHEEPAGESVMEKITEKIHGHDSSSSSSSSDTDDDKKSSTSSLKTK-VFRLFGRE 59
M ++HKHEE S++EKI EKIHGH SSS S SD D SS+SS ++RLFGRE
Sbjct: 1 MVEDHKHEE----SILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGRE 56
Query: 60 KPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVL 119
KPVHKVLGGGKPAD+FLWRNKK+S GVLG TA WVLF+L EYHLL +CH I ALA L
Sbjct: 57 KPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAAL 116
Query: 120 FLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
FLWSNA TFI+KS P IPEV+IPE+P+LQL S LR EINR TLLR IASG+D+KKF+ V
Sbjct: 117 FLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILV 176
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
IAGLWV+SI+GS NFLTLFY VLL T+PV+YEKYED+VD++ EKA EIKKQYAV D
Sbjct: 177 IAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLD 236
Query: 240 AKVL----SKIPRSLKDKKK 255
KVL SKIPR +KKK
Sbjct: 237 EKVLRKVISKIPRGALNKKK 256
>sp|Q6DBN4|RTNLF_ARATH Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1
SV=1
Length = 253
Score = 308 bits (790), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/254 (63%), Positives = 199/254 (78%), Gaps = 4/254 (1%)
Query: 1 MADEHKHEEPAGESVMEKITEKIHGHDSSSSSSSSDTDDDKKSSTSSLKTKVFRLFGREK 60
MA+E + ES+MEKI +KI SSSSSD++ +K S S+LK K++RLFGREK
Sbjct: 1 MAEELEKSMHKEESLMEKIADKI---HDHDSSSSSDSEHEKPESPSALKAKIYRLFGREK 57
Query: 61 PVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF 120
PVHKVLGGG PADVFLWR+KK+SA VLG ATAIWVLF+L+EYH L+LVCH LI ALA LF
Sbjct: 58 PVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALF 117
Query: 121 LWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVI 180
L SNA F+NK+PP+IPE++I EE L + SALR E+N+AF +LR IA GRDLKKFL V+
Sbjct: 118 LLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVV 177
Query: 181 AGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDA 240
GLW++S+VG+W NFLTL YI FV+LHTVP++YEK+ED+VD +EK E+KK Y VFD
Sbjct: 178 FGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDE 237
Query: 241 KVLSKIP-RSLKDK 253
KVLSK+P SLK K
Sbjct: 238 KVLSKLPVASLKAK 251
>sp|Q9M145|RTNLG_ARATH Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=3
SV=2
Length = 244
Score = 231 bits (590), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 167/239 (69%), Gaps = 7/239 (2%)
Query: 10 PAGESVMEKIT-EKIHGHDSSSSSSSSDTDDDKKSSTSSLKTKVFRLFGREKPVHKVLGG 68
P E +M I E+I+G DS +SS S +K S + ++R+FGRE+P+H VLGG
Sbjct: 11 PLEEPLMGNIVPEEINGLDSLTSSDSDS---EKPDSPVPINAPIYRMFGRERPIHMVLGG 67
Query: 69 GKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTF 128
GKPADV LWR+KK++ G+L T IW+LF LLT +C I+ L + FLWSNA
Sbjct: 68 GKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLWSNA--- 124
Query: 129 INKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSI 188
+NKSP + ++YIPE+P+LQ ASA+ FE+N AF LR IA RD+K F+ + GLW+VS+
Sbjct: 125 LNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSV 184
Query: 189 VGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIP 247
+G+W +FL+L YI FVL+HTVP++YEKYED +D +EKA E+KK Y VF+AK LSKIP
Sbjct: 185 IGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFEAKFLSKIP 243
>sp|Q9SS37|RTNLH_ARATH Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1
SV=1
Length = 247
Score = 219 bits (559), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 156/247 (63%), Gaps = 10/247 (4%)
Query: 1 MADEHKHEEPAGESVMEKITEKIHGHDSSSSSSSSDTDDDKKSSTSSLKTKVFRLFGREK 60
M D++ E+ G+ V + TE + + SS + S+ ++ RLF R+K
Sbjct: 1 MPDKNIVEDVIGDLV-DNFTETVQKNKHGSSFFEQE---------DSVSSRFNRLFDRQK 50
Query: 61 PVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF 120
P+H VLGGGK ADV LWRNKKISA VL GATAIWVLF+ + +H L+LVC+ L++ + F
Sbjct: 51 PIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQF 110
Query: 121 LWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVI 180
+WSNAS F+N+S R+P + +P++ ++ A+ E+NR L+++A +LK+FL +
Sbjct: 111 VWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAV 170
Query: 181 AGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDA 240
GLWV ++VGS CNFLT+ YI FV HT+PV+YE+YED VD F + + Y D
Sbjct: 171 IGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDT 230
Query: 241 KVLSKIP 247
LS+IP
Sbjct: 231 GFLSRIP 237
>sp|Q9LJQ5|RTNLI_ARATH Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2
SV=1
Length = 225
Score = 184 bits (467), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 141/225 (62%), Gaps = 7/225 (3%)
Query: 31 SSSSSDTDDDKKSSTSSLKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGA 90
+ SSSD++D++ ++ +LF R++ +H + GGGK AD+ LWR KI+A ++ G
Sbjct: 5 TGSSSDSEDERTIHKTT------KLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGV 58
Query: 91 TAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLA 150
+ +W L +++EY+ +TL+CH + ++ F+WS AS F+N P IPEV + E QLA
Sbjct: 59 SILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLA 118
Query: 151 SALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVP 210
+ N+ T L ++A GRD F L++VSI+G++ NF+ L +I FV + T+P
Sbjct: 119 RSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLP 178
Query: 211 VIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPR-SLKDKK 254
V+YE YED VD+ + K ++KK Y D VLSKIPR ++K+KK
Sbjct: 179 VMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNKK 223
>sp|Q8GYH6|RTNLP_ARATH Reticulon-like protein B16 OS=Arabidopsis thaliana GN=RTNLB16 PE=2
SV=1
Length = 226
Score = 138 bits (347), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 119/222 (53%), Gaps = 1/222 (0%)
Query: 33 SSSDTDDDKKSSTSSLKTKVFRLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATA 92
S SD D D + +RL GR+ VH+ +GGGK AD+ LWR + +S GV+ +T
Sbjct: 3 SLSDIDGDFDGRNEGGSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTV 62
Query: 93 IWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASA 152
W++F+ L++ L++ + + F+ + S F N+ +PE+ + EE V A++
Sbjct: 63 AWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAAS 122
Query: 153 LRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVI 212
R ++N + ++ G D + F V+ LW++S +GS+ + TL YI +L T+P +
Sbjct: 123 FRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPAL 182
Query: 213 YEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIPRSL-KDK 253
Y KY+ +VD + Y + D V+S++ SL KDK
Sbjct: 183 YSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDK 224
>sp|Q6NPD8|RTNLJ_ARATH Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2
SV=1
Length = 201
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 109/197 (55%)
Query: 59 EKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAV 118
E+ VH+ + G AD+ +W+N++ +LG T +W LF+ Y V + ++++ +
Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVI 61
Query: 119 LFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLS 178
LFLW+ ++ N+ P++P + I EE V +A A+R IN + REI GR+ K+
Sbjct: 62 LFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFR 121
Query: 179 VIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVF 238
V LW VS VG++ NFLT+ Y+ VL +P +YE+Y+D +D I+ QY
Sbjct: 122 VSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKI 181
Query: 239 DAKVLSKIPRSLKDKKK 255
D ++L KI +K K
Sbjct: 182 DERLLQKIIAKPTNKIK 198
>sp|A2RVT6|RTNLN_ARATH Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2
SV=2
Length = 215
Score = 129 bits (323), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 118/196 (60%), Gaps = 12/196 (6%)
Query: 66 LGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWS-- 123
LGGG+ AD+ W+NKK S +LG T IW LF+++EY +T +C L++ + + +WS
Sbjct: 26 LGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYI 85
Query: 124 NASTFINKSPPRIPEVYIPEEPVLQLASALRF---EINRAFTLLREIASGRDLKKFLSVI 180
+S I PP I ++ I E S RF +IN L +I+SG+D + +
Sbjct: 86 GSSQLIQSKPPSINDLRISE-------SNWRFLFNKINWFIIKLYDISSGKDFRLLFLAV 138
Query: 181 AGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDA 240
LW++S+VG++ + LTL YIVFV L T+P++YE+YE+ + + K+ ++KK F++
Sbjct: 139 VSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEELTYAASKSGRDMKKLLNKFNS 198
Query: 241 KVLSKIPRSLKDKKKA 256
KV++KIP++ ++
Sbjct: 199 KVINKIPKAQAKTRRT 214
>sp|Q9LT71|RTNLK_ARATH Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2
SV=1
Length = 200
Score = 120 bits (301), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 95/159 (59%)
Query: 63 HKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLW 122
H+ LG G AD+ LWRN+ + +L +T W LF+ Y+LL+ V + L++ +A+ FLW
Sbjct: 14 HQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLW 73
Query: 123 SNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
+ ++T +N+ P +P + IPEE + A LR IN ++ +I R+ + L V
Sbjct: 74 AKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLV 133
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVD 221
LW +S VG+ N LTL YI +L + P++YEKY+D +D
Sbjct: 134 LWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID 172
>sp|Q9M392|RTNLL_ARATH Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2
SV=1
Length = 203
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 103/167 (61%)
Query: 54 RLFGREKPVHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLI 113
+LF R++ +H++LGGG ADV LWR K +S G++ A W++F+ Y + TL+ L+
Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLL 66
Query: 114 VALAVLFLWSNASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDL 173
+ L++LFLWS +++ +N+ P +PE I E + + LR +N+ + +IA RD
Sbjct: 67 LLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDS 126
Query: 174 KKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRV 220
+ + V L+++S++GS +F TL + +++ TVP YE+YED +
Sbjct: 127 ELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
>sp|Q9ZU43|RTNLO_ARATH Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2
SV=2
Length = 191
Score = 94.4 bits (233), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 106/191 (55%), Gaps = 6/191 (3%)
Query: 62 VHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFL 121
V ++LG G AD+ LW++K S L AT W L + +E L+ L+C L++ + +LFL
Sbjct: 4 VDQILGDGAVADLCLWKDKINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFL 63
Query: 122 WSN-ASTFINKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVI 180
W+ F + PP E+ P+ P+ L S + + +L EIA G+D K FL I
Sbjct: 64 WAKFGEVFFTRRPPTPEELNQPDSPLKALFSMMEGHL----LMLYEIAYGKDNKTFLKTI 119
Query: 181 AGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDA 240
+ ++ +GS+ + LT+ YI V T+PV+Y ++++ +DSF K E VF
Sbjct: 120 LYVAIIYNIGSYISLLTILYICLVCSMTIPVVYMQFQELIDSFMGKVSEEKNNLLEVFK- 178
Query: 241 KVLSKIPRSLK 251
+V+SKIPR+ K
Sbjct: 179 QVVSKIPRAPK 189
>sp|O64837|RTNLM_ARATH Reticulon-like protein B13 OS=Arabidopsis thaliana GN=RTNLB13 PE=2
SV=1
Length = 206
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 78/149 (52%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKS 132
D++LWR KK++ L +T+ W+L + +T+V I ++++FLW + ++K
Sbjct: 18 DIYLWRRKKLAFSTLLVSTSTWILLSFYGFTTITIVSWIGIAVVSMIFLWGSLLRLLSKV 77
Query: 133 PPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSW 192
P + + + EE V++ + R + + + + + F + G W++S +G+
Sbjct: 78 EPELSGLEVSEEFVVETVRSCRMLMEEMVRWMFRVGAESEWFVFARTVLGFWILSRIGNL 137
Query: 193 CNFLTLFYIVFVLLHTVPVIYEKYEDRVD 221
+F T +I V+ TVP ++E+Y D++
Sbjct: 138 LDFHTCLFIGLVMGLTVPKLWEEYGDQIQ 166
>sp|Q99P72|RTN4_MOUSE Reticulon-4 OS=Mus musculus GN=Rtn4 PE=1 SV=2
Length = 1162
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 18/183 (9%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF------LWSNAS 126
D+ WR+ K GV+ GA+ LF LL + ++V +ALA+L ++
Sbjct: 977 DLLYWRDIK-KTGVVFGAS----LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 1031
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
I KS P EV I EE V + +++ +N LR + DL L
Sbjct: 1032 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKF 1091
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+WV + VG+ N LTL + + L ++PVIYE+++ ++D + A +K A
Sbjct: 1092 AVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQAQIDHYLGLANKSVKDAMAKIQ 1151
Query: 240 AKV 242
AK+
Sbjct: 1152 AKI 1154
>sp|O95197|RTN3_HUMAN Reticulon-3 OS=Homo sapiens GN=RTN3 PE=1 SV=2
Length = 1032
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K + V G T + +L L + ++++V + ++ L+V ++ + +
Sbjct: 846 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 903
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P ++ + E +A INRA L+ + DL L +
Sbjct: 904 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 963
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSF 223
+W+++ VG+ N +TL + +L+ +VP++YEKY+ ++D +
Sbjct: 964 MWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHY 1004
>sp|Q9NQC3|RTN4_HUMAN Reticulon-4 OS=Homo sapiens GN=RTN4 PE=1 SV=2
Length = 1192
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 18/183 (9%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF------LWSNAS 126
D+ WR+ K GV+ GA+ LF LL + ++V +ALA+L ++
Sbjct: 1007 DLLYWRDIK-KTGVVFGAS----LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 1061
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
I KS P EV I EE V + +++ +N LR + DL L
Sbjct: 1062 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKF 1121
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+WV + VG+ N LTL + + L +VPVIYE+++ ++D + A +K A
Sbjct: 1122 AVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQ 1181
Query: 240 AKV 242
AK+
Sbjct: 1182 AKI 1184
>sp|Q9JK11|RTN4_RAT Reticulon-4 OS=Rattus norvegicus GN=Rtn4 PE=1 SV=1
Length = 1163
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 18/183 (9%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF------LWSNAS 126
D+ WR+ K GV+ GA+ LF LL + ++V +ALA+L ++
Sbjct: 978 DLLYWRDIK-KTGVVFGAS----LFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVI 1032
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
I KS P EV I EE V + +++ +N LR + DL L
Sbjct: 1033 QAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNSTIKELRRLFLVDDLVDSLKF 1092
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+WV + VG+ N LTL + + L ++PVIYE+++ ++D + A +K A
Sbjct: 1093 AVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQVQIDHYLGLANKSVKDAMAKIQ 1152
Query: 240 AKV 242
AK+
Sbjct: 1153 AKI 1155
>sp|Q5RBL9|RTN3_PONAB Reticulon-3 OS=Pongo abelii GN=RTN3 PE=2 SV=1
Length = 236
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 91/191 (47%), Gaps = 16/191 (8%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K + V G T + +L L + ++++V + ++ L+V ++ + +
Sbjct: 50 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRIYKSVIQAV 107
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P ++ + E +A INRA L+ + DL L +
Sbjct: 108 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 167
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N +TL + +L+ +VP++YEKY+ ++D + A + Q K+
Sbjct: 168 MWLMTYVGAVFNGITLLILAELLIFSVPIVYEKYKTQIDHYVGIA----RDQTKSIVEKI 223
Query: 243 LSKIPRSLKDK 253
+K+P K K
Sbjct: 224 QAKLPGIAKKK 234
>sp|Q08D83|RTN3_BOVIN Reticulon-3 OS=Bos taurus GN=RTN3 PE=2 SV=1
Length = 256
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 91/191 (47%), Gaps = 16/191 (8%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K + V G T + +L L + ++++V + ++ L+V ++ + +
Sbjct: 70 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 127
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P ++ + E +A INRA L+ + DL L +
Sbjct: 128 QKSEEGHPFKAYLDVDITLSSEAFHNYVNAAMVHINRALKLIIRLFLVEDLVDSLKLAVF 187
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N +TL + +L+ ++P++YEKY+ ++D + A + Q K+
Sbjct: 188 MWLMTYVGAVFNGITLLILAELLVFSIPIVYEKYKTQIDHYVGIA----RDQTKSIVEKI 243
Query: 243 LSKIPRSLKDK 253
+K+P K K
Sbjct: 244 QAKLPGIAKKK 254
>sp|Q9ES97|RTN3_MOUSE Reticulon-3 OS=Mus musculus GN=Rtn3 PE=1 SV=2
Length = 964
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 91/191 (47%), Gaps = 16/191 (8%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K + V G T + +L L + ++++V + ++ L+V ++ + +
Sbjct: 778 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 835
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P ++ + E +A +N+A L+ + DL L +
Sbjct: 836 QKSEEGHPFKAYLDVDITLSSEAFHNYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 895
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKV 242
+W+++ VG+ N +TL + +L+ +VP++YEKY+ ++D + A + Q K+
Sbjct: 896 MWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHYVGIA----RDQTKSIVEKI 951
Query: 243 LSKIPRSLKDK 253
+K+P K K
Sbjct: 952 QAKLPGIAKKK 962
>sp|Q6RJR6|RTN3_RAT Reticulon-3 OS=Rattus norvegicus GN=Rtn3 PE=1 SV=1
Length = 940
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNASTFI 129
D+ WR+ K + V G T + +L L + ++++V + ++ L+V ++ + +
Sbjct: 754 DLIFWRDVKKTGFVFG--TTLIMLLSLAAFSVISVVSYLILALLSVTISFRVYKSVIQAV 811
Query: 130 NKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAG 182
KS P ++ + E +A +N+A L+ + DL L +
Sbjct: 812 QKSEEGHPFKAYLDVDITLSSEAFHSYMNAAMVHVNKALKLIIRLFLVEDLVDSLKLAVF 871
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSF 223
+W+++ VG+ N +TL + +L+ +VP++YEKY+ ++D +
Sbjct: 872 MWLMTYVGAVFNGITLLILAELLVFSVPIVYEKYKTQIDHY 912
>sp|Q28D16|RTN3_XENTR Reticulon-3 OS=Xenopus tropicalis GN=rtn3 PE=2 SV=1
Length = 213
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 94/200 (47%), Gaps = 20/200 (10%)
Query: 68 GGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNAST 127
G D+ WR+ K S V GG + L L + +++++ + ++ LAV + +
Sbjct: 22 GCAVQDLLYWRDVKQSGMVFGGTMVL--LLSLAAFSIISVISYLVLSLLAVTISYRVYKS 79
Query: 128 FINKSPPRIPEVYIPEEPVLQLASALRFE------------INRAFTLLREIASGRDLKK 175
+ ++ + E + P +P+L+ AL + +N A + + DL
Sbjct: 80 VL-QAVQKTDEGH-PFKPLLEKDIALSSDAFQKALSTSLAHVNHALKYIVRLFLVEDLVD 137
Query: 176 FLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQY 235
L + +W+++ VG+ N +TL + +L T P++YEKY+ ++D + + +K
Sbjct: 138 SLKLALLMWLMTYVGAVFNGITLLILGVLLAFTAPIVYEKYKVQIDHYVSLVHSHVKS-- 195
Query: 236 AVFDAKVLSKIPRSLKDKKK 255
K+ +K+P +LK K +
Sbjct: 196 --ITEKIQAKLPGALKKKSE 213
>sp|Q5J6M8|RTN3A_XENLA Reticulon-3-A OS=Xenopus laevis GN=rtn3-a PE=2 SV=2
Length = 214
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 91/198 (45%), Gaps = 16/198 (8%)
Query: 68 GGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSN 124
G D+ WR+ K S V GG + L L + +++++ + ++ L V ++ +
Sbjct: 23 GCAVRDLLYWRDVKQSGMVFGGTMVL--LLSLAAFSIISVISYLVLSLLTVTISYRVYKS 80
Query: 125 ASTFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFL 177
+ K+ P ++ + + + +A +N A + + DL L
Sbjct: 81 VLQAVQKTDEGHPFKPLLEKDITLSSDSFQKALTASLAHVNHALKYIVRLFLVDDLVDSL 140
Query: 178 SVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAV 237
+ +W+++ VG+ N +TL + +L T P++YEKY+ ++D + +++K
Sbjct: 141 KLALLMWLMTYVGAVFNGITLLILGVLLTFTAPIVYEKYKVQIDHYVSLVHSQVKS---- 196
Query: 238 FDAKVLSKIPRSLKDKKK 255
K+ +K+P +LK K +
Sbjct: 197 ITEKIQAKLPGALKKKSE 214
>sp|Q68EW1|RTN3B_XENLA Reticulon-3-B OS=Xenopus laevis GN=rtn3-b PE=2 SV=1
Length = 214
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 96/196 (48%), Gaps = 22/196 (11%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINKS 132
D+ WR+ K S V GG + L L + +++++ + ++ L+V + + + ++
Sbjct: 28 DLLYWRDVKQSGMVFGGTMVL--LLSLAAFSIISVISYLVLSLLSVTISFRVYKSVL-QA 84
Query: 133 PPRIPEVYIPEEPVLQ-------------LASALRFEINRAFTLLREIASGRDLKKFLSV 179
+ E + P +P+L+ L+S+L +N A + + DL L +
Sbjct: 85 VQKTEEGH-PFKPLLEKDIALSSDSFQKGLSSSLA-HVNHALKSIVRLFLVEDLVDSLKL 142
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+W+++ +G+ N +TL + +L T P++YEKY+ ++D + +++K
Sbjct: 143 ALLMWLMTYIGAVFNGITLLILGVLLAFTTPLVYEKYKVQIDHYVSLVHSQVKS----IT 198
Query: 240 AKVLSKIPRSLKDKKK 255
K+ +K+P +LK K +
Sbjct: 199 EKIQAKLPGALKKKSE 214
>sp|Q16799|RTN1_HUMAN Reticulon-1 OS=Homo sapiens GN=RTN1 PE=1 SV=1
Length = 776
Score = 51.6 bits (122), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 138 EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLT 197
E+ + +E + + L+F +N LR + +DL L +W+++ VG+ N LT
Sbjct: 664 EITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 723
Query: 198 LFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIP 247
L + V + T+PV+Y K++ ++D + ++ AK+ +KIP
Sbjct: 724 LLLMAVVSMFTLPVVYVKHQAQIDQY----LGLVRTHINAVVAKIQAKIP 769
>sp|Q5IS59|RTN1_PANTR Reticulon-1 OS=Pan troglodytes GN=RTN1 PE=2 SV=1
Length = 776
Score = 51.6 bits (122), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 138 EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLT 197
E+ + +E + + L+F +N LR + +DL L +W+++ VG+ N LT
Sbjct: 664 EITLSQEQIQKYTDCLQFYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 723
Query: 198 LFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIP 247
L + V + T+PV+Y K++ ++D + ++ AK+ +KIP
Sbjct: 724 LLLMAVVSMFTLPVVYVKHQAQIDQY----LGLVRTHINAVVAKIQAKIP 769
>sp|A7MC64|RTN1_XENTR Reticulon-1 OS=Xenopus tropicalis GN=rtn1 PE=2 SV=2
Length = 764
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 89/188 (47%), Gaps = 16/188 (8%)
Query: 70 KPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNAS 126
K ++ WR+ K + V G + + +LF L ++ +++++ + + AL+ ++ +
Sbjct: 577 KAIELLYWRDIKQTGIVFG--SVLLMLFSLTQFSVVSVIAYLALAALSATISFRIYKSVL 634
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
+ K+ P E+ + +E + + L+ N LR + +DL L
Sbjct: 635 QAVQKTDEGHPFKSYLDMEISLSQEQIQKYTDCLQAYTNSIVKELRRLFLVQDLVDSLKF 694
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+W+++ VG+ N LTL + V + ++PV+Y+KY+ ++D + ++
Sbjct: 695 AVLMWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQY----LGLVRTNMNTIV 750
Query: 240 AKVLSKIP 247
K+ +KIP
Sbjct: 751 TKIQAKIP 758
>sp|O70622|RTN2_MOUSE Reticulon-2 OS=Mus musculus GN=Rtn2 PE=1 SV=1
Length = 471
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 16/186 (8%)
Query: 72 ADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAV---LFLWSNASTF 128
AD+ W++ + S V G A L LL + ++++ H ++ L L ++
Sbjct: 273 ADLLYWKDTRTSGAVFTGLMA--SLLCLLHFSIVSVAAHLALLGLCATISLRVYRKVLQA 330
Query: 129 INKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIA 181
+++ P ++ + E +L+ + + T LR DL L +
Sbjct: 331 VHRGDGTNPFQAYLDMDLTLTREQTERLSQQIASHVVSTATQLRHFFLVEDLVDSLKLAL 390
Query: 182 GLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAK 241
++++ VG+ N LTL + V L TVP++Y +++ ++D + + Q + AK
Sbjct: 391 LFYILTFVGAIFNGLTLVILGVVALFTVPLLYRQHQAQIDQY----VGLVTNQLSHIKAK 446
Query: 242 VLSKIP 247
+ +KIP
Sbjct: 447 IRAKIP 452
>sp|Q8K0T0|RTN1_MOUSE Reticulon-1 OS=Mus musculus GN=Rtn1 PE=1 SV=1
Length = 780
Score = 49.7 bits (117), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 138 EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLT 197
E+ + +E + + L+ +N LR + +DL L +W+++ VG+ N LT
Sbjct: 668 EITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 727
Query: 198 LFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIP 247
L + V + T+PV+Y K++ +VD + ++ AK+ +KIP
Sbjct: 728 LLLMAVVSMFTLPVVYVKHQAQVDQY----LGLVRTHINTVVAKIQAKIP 773
>sp|Q64548|RTN1_RAT Reticulon-1 OS=Rattus norvegicus GN=Rtn1 PE=2 SV=1
Length = 777
Score = 49.7 bits (117), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 138 EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSVIAGLWVVSIVGSWCNFLT 197
E+ + +E + + L+ +N LR + +DL L +W+++ VG+ N LT
Sbjct: 665 EITLSQEQIQKYTDCLQLYVNSTLKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLT 724
Query: 198 LFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFDAKVLSKIP 247
L + V + T+PV+Y K++ +VD + ++ AK+ +KIP
Sbjct: 725 LLLMAVVSMFTLPVVYVKHQAQVDQY----LGLVRTHINTVVAKIQAKIP 770
>sp|Q5MY90|RTN1B_XENLA Reticulon-1-B OS=Xenopus laevis GN=rtn1-b PE=2 SV=1
Length = 752
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 88/188 (46%), Gaps = 16/188 (8%)
Query: 70 KPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNAS 126
K D+ WR+ K + V G + + +LF L + +++++ + + AL+ ++ +
Sbjct: 565 KAIDLLYWRDVKQTGIVFG--SILLMLFSLTLFSVVSVIAYLALAALSATISFRIYKSVL 622
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
+ K+ P E+ + +E + + + N LR + +DL L
Sbjct: 623 QAVQKTDEGHPFKSYLDIEISLSQEQIQKYTGCFQLYTNSIAKELRRLFLVQDLVDSLKF 682
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+W+++ VG+ N LTL + V + ++PV+Y+KY+ ++D + ++ +
Sbjct: 683 AVLMWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQY----LGLVRTNMNIIV 738
Query: 240 AKVLSKIP 247
K+ +KIP
Sbjct: 739 TKIQAKIP 746
>sp|Q6IFY7|RTN1A_XENLA Reticulon-1-A OS=Xenopus laevis GN=rtn1-a PE=2 SV=1
Length = 207
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 90/188 (47%), Gaps = 16/188 (8%)
Query: 70 KPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLF---LWSNAS 126
+ D+ WR+ K + V G + + +LF L+++ +++++ + + AL+ ++ +
Sbjct: 20 QAIDLLYWRDIKQTGIVFG--SVLLMLFSLIQFSVVSVMAYLALAALSATISFRIYKSVL 77
Query: 127 TFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLKKFLSV 179
+ K+ P E+ + +E + + L+ N LR + +DL L
Sbjct: 78 QAVQKTDEGHPFKSYLDMEISLSQEQIQKYTDCLQVYTNSIAKELRRLFLVQDLVDSLKF 137
Query: 180 IAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQYAVFD 239
+W+++ VG+ N LTL + V + ++PV+Y+KY+ ++D + ++
Sbjct: 138 AVLMWLLTYVGALFNGLTLLIMAVVSMFSLPVVYDKYQAQIDQY----LGLVRTNMNTIM 193
Query: 240 AKVLSKIP 247
K+ +KIP
Sbjct: 194 TKIQAKIP 201
>sp|Q67ZE1|HSDD2_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
OS=Arabidopsis thaliana GN=3BETAHSD/D2 PE=2 SV=2
Length = 564
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 58 REKP--VHKVLGGGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVA 115
RE P ++LGGGK AD LW++ K + + +I+ F ++T + L+VA
Sbjct: 369 REGPSKASRILGGGKVADTLLWKDLKQTLIAIFILISIYYNFVATGSTVVTALSKALLVA 428
Query: 116 LAVLFLWSN-ASTFINKSPPRIP--EVYIPEEPVLQLASALRFEINRAFTLLREIASGRD 172
LFL + +IP + ++ ++ L+ ++ N LR + G D
Sbjct: 429 SVFLFLHGILPEKIFGYTVEKIPASQFHLSKDSSHDLSLSVISSWNTTVKALRSLCQGND 488
Query: 173 LKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDS 222
F V+ L +S+ G+ + ++F I + ++YEK E +DS
Sbjct: 489 WSFFFKVVFVLLALSLAGA-ISLHSIFVIGLPIAFLAFLVYEKKEQEIDS 537
>sp|A9X4U2|HSDD3_ARATH 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 3
OS=Arabidopsis thaliana GN=3BETAHSD/D3 PE=2 SV=2
Length = 561
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 10/165 (6%)
Query: 59 EKPVHKVLGGGKPADVFLWRNKK---ISAGVLGGATAIWVLF--QLLEYHLLTLVCHCLI 113
+ ++LG GK AD+ LWRN+K +S VL W F L+ +
Sbjct: 367 QSTADQLLGCGKVADILLWRNEKKTFVSFLVL-NLFYYWFFFSGNTFTSSAAQLLFIFAV 425
Query: 114 VALAVLFLWSNASTF-INKSPPRIPEVYIPEEPVLQLASALRFEINRAFTLLREIASGRD 172
V F+ S F +NK PP E I E V L+S + N+ + ++SG D
Sbjct: 426 ALYGVSFVPSKIFGFQVNKIPPWRFE--ISESAVRDLSSDIVVVWNQGVRSFKSLSSGGD 483
Query: 173 LKKFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYE 217
KF + L+++ ++ S + + V T IYE+YE
Sbjct: 484 WIKFFKIAGSLYLLKLIVSR-SLAAFLFTVMSFSFTGFFIYEQYE 527
>sp|Q4FZ76|RTN2_XENLA Reticulon-2 OS=Xenopus laevis GN=rtn2 PE=2 SV=1
Length = 321
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 82/163 (50%), Gaps = 16/163 (9%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAV---LFLWSNASTFI 129
D+ WR+ +S G L G T L L ++ ++++ + ++ L+V L L++ +
Sbjct: 136 DLLYWRDTLLSTGCLTGVT--LSLLCLSQFSVISVFAYGCLIILSVTLTLRLYTKLLHAL 193
Query: 130 NKSPPRIP-EVYIPEEPVLQLASALRFEI-NRAFTL-------LREIASGRDLKKFLSVI 180
+ P + Y+ + L+L + EI RAF+L LR + +LK L +
Sbjct: 194 KRGNGANPFQYYLDTD--LKLTTKQAEEIVARAFSLASTTLCTLRSLFLVEELKDSLKFL 251
Query: 181 AGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSF 223
+++++ VG+ N +T+ + + T P++Y++++ +VD +
Sbjct: 252 VIVYLLTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVDHY 294
>sp|O75298|RTN2_HUMAN Reticulon-2 OS=Homo sapiens GN=RTN2 PE=1 SV=1
Length = 545
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 68 GGKPADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCH------CLIVALAVLFL 121
G K AD+ W++ + S V G + L LL + ++++ H C ++L V
Sbjct: 342 GSKVADLLYWKDTRTSGVVFTGL--MVSLLCLLHFSIVSVAAHLALLLLCGTISLRV--- 396
Query: 122 WSNASTFINKSPPRIP-------EVYIPEEPVLQLASALRFEINRAFTLLREIASGRDLK 174
+ +++ P ++ + E +L+ + + A T LR DL
Sbjct: 397 YRKVLQAVHRGDGANPFQAYLDVDLTLTREQTERLSHQITSRVVSAATQLRHFFLVEDLV 456
Query: 175 KFLSVIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQ 234
L + ++++ VG+ N LTL + + L T+P++Y +++ ++D + + Q
Sbjct: 457 DSLKLALLFYILTFVGAIFNGLTLLILGVIGLFTIPLLYRQHQAQIDQYV----GLVTNQ 512
Query: 235 YAVFDAKVLSKIP 247
+ AK+ +KIP
Sbjct: 513 LSHIKAKIRAKIP 525
>sp|Q4FZ58|RTN2_XENTR Reticulon-2 OS=Xenopus tropicalis GN=rtn2 PE=2 SV=2
Length = 321
Score = 38.5 bits (88), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 81/163 (49%), Gaps = 16/163 (9%)
Query: 73 DVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAV---LFLWSNASTFI 129
D+ WR+ +SAG L G T L L ++ ++++ + ++ L+V L L++ +
Sbjct: 136 DLLYWRDILLSAGCLTGVT--LSLLCLSQFSVISVFAYGCLIILSVTLTLRLYTKLLHAL 193
Query: 130 NKSPPRIP-EVYIPEEPVLQLASALRFEIN-RAFTLL-------REIASGRDLKKFLSVI 180
+ P + Y+ + L+L + EI R +LL R + +LK L +
Sbjct: 194 KRGNGANPFQYYLDAD--LKLTTKQAEEITARVLSLLSTTICTLRSLFLVEELKDSLKFL 251
Query: 181 AGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSF 223
+++++ VG+ N +T+ + + T P++Y++++ +VD +
Sbjct: 252 VIIYLLTYVGAVFNGITVLLLCVIGAFTFPILYKQHQTQVDHY 294
>sp|Q04947|RTN1_YEAST Reticulon-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RTN1 PE=1 SV=1
Length = 295
Score = 38.1 bits (87), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 17/172 (9%)
Query: 72 ADVFLWRNKKISAGVLGGATAIWVLFQLLEYHLLTLVCHCLIVALAVLFLWSNASTFINK 131
D+ LWRN + GG+ L LL + L+ L VA +LF + + F++K
Sbjct: 21 CDLLLWRNPVQTGKYFGGS-----LLALLILKKVNLITFFLKVAYTILFT-TGSIEFVSK 74
Query: 132 S--PPRIPEVYIPEEPVLQLASALRFEINRAFTLL-------REIASGRDLKKFLSVIAG 182
+ Y P+E +A ++ I+ A L R+ + K
Sbjct: 75 LFLGQGLITKYGPKE-CPNIAGFIKPHIDEALKQLPVFQAHIRKTVFAQVPKHTFKTAVA 133
Query: 183 LWVVSIVGSWCNFLTLFYIVFVLLHTVPVIYEKYEDRVDSFSEKAWAEIKKQ 234
L+++ SW + T+ ++ + T+PVIY Y+ +D+ + EI KQ
Sbjct: 134 LFLLHKFFSWFSIWTIVFVADIFTFTLPVIYHSYKHEIDATVAQG-VEISKQ 184
>sp|Q92766|RREB1_HUMAN Ras-responsive element-binding protein 1 OS=Homo sapiens GN=RREB1
PE=1 SV=3
Length = 1687
Score = 32.7 bits (73), Expect = 2.3, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 11 AGESVMEKITEKIHGHDSSSSS----SSSDTDDDKKSSTSSLKTKVFRLFGREK 60
AGE+ EK+ E+ G S+ SS +DDDKK T S K+ + R+K
Sbjct: 1459 AGEAPAEKLAEETEGPSDGESAAEKRSSEKSDDDKKPKTDSPKSVASKADKRKK 1512
>sp|Q0IEK6|EPG5_AEDAE Ectopic P granules protein 5 homolog OS=Aedes aegypti GN=AAEL009648
PE=3 SV=1
Length = 2282
Score = 31.6 bits (70), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 124 NASTFINKSPPRIPEVYIPEEPVLQLASA---LRFEINRAFTLLREIASGRDLKKFLSVI 180
N ++ P P V P +QL +A LR I+ F LR+ G K+FL+ +
Sbjct: 157 NLHPVLSNLPADSPVVLNPPIDAMQLTAAIGELRLCISILFAFLRK---GITDKRFLADV 213
Query: 181 AGLWVVSIVGSWCNFLTLFYIVFVLLHTV 209
G W V +V + T+ +FVL H +
Sbjct: 214 RG-WTVKLVATQLRIATVHDHLFVLFHVL 241
>sp|Q86YF9|DZIP1_HUMAN Zinc finger protein DZIP1 OS=Homo sapiens GN=DZIP1 PE=1 SV=1
Length = 867
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 27 DSSSSSSSSDTDDDKKSSTSSLKT---KVFRLFGREKPVHKVLGGGKPADVFL 76
D + S DTDD K + ++KT KV ++F K V+K +GG ++F+
Sbjct: 722 DGTEGSEIEDTDDSPKPAGVAVKTPTEKVEKMFPHRKNVNKPVGGTNVPEMFI 774
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,360,151
Number of Sequences: 539616
Number of extensions: 3707220
Number of successful extensions: 22265
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 22048
Number of HSP's gapped (non-prelim): 134
length of query: 256
length of database: 191,569,459
effective HSP length: 115
effective length of query: 141
effective length of database: 129,513,619
effective search space: 18261420279
effective search space used: 18261420279
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)