BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039013
(77 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8S8N3|CLE6_ARATH CLAVATA3/ESR (CLE)-related protein 6 OS=Arabidopsis thaliana
GN=CLE6 PE=2 SV=1
Length = 81
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 2 LMLFFIVFSLLFMSFQARILHDEQQANAMQSNIDSQLLLRELGFDLTKLKHYERLSSTIH 61
L++ I++S +S QARIL + ++DSQ+LLRELG DL+K K + +
Sbjct: 10 LIILLIIYSTPILSSQARILRTYRPTT--MGDMDSQVLLRELGIDLSKFKGQDERRFLV- 66
Query: 62 RESDRVSPGGPDPQHH 77
+S+RVSPGGPDPQHH
Sbjct: 67 -DSERVSPGGPDPQHH 81
>sp|Q8S8N2|CLE5_ARATH CLAVATA3/ESR (CLE)-related protein 5 OS=Arabidopsis thaliana
GN=CLE5 PE=2 SV=2
Length = 81
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 46/70 (65%), Gaps = 6/70 (8%)
Query: 9 FSLLFMSFQARILHDEQQANAMQSNIDSQLLLRELGFDLTKLK-HYERLSSTIHRESDRV 67
FSL +S QARIL + + N+DSQ+LL ELGFDL+K K H ER SDRV
Sbjct: 17 FSLQTLSSQARILRSYRAVS--MGNMDSQVLLHELGFDLSKFKGHNER---RFLVSSDRV 71
Query: 68 SPGGPDPQHH 77
SPGGPDPQHH
Sbjct: 72 SPGGPDPQHH 81
>sp|Q8S8N1|CLE7_ARATH CLAVATA3/ESR (CLE)-related protein 7 OS=Arabidopsis thaliana
GN=CLE7 PE=2 SV=1
Length = 86
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 2 LMLFFIVFSLLFMSFQARILHDEQQANAMQSNIDSQLLLRELGFDLTKLKHYERLSSTIH 61
L+LF ++ LL + + RIL + N+ + +S LL+ LG+++++LK R ++
Sbjct: 6 LLLFVMLTFLLVIEMEGRIL----RVNSKTKDGESNDLLKRLGYNVSELKRIGR-ELSVQ 60
Query: 62 RESDRVSPGGPDPQHH 77
E DR SPGGPDPQHH
Sbjct: 61 NEVDRFSPGGPDPQHH 76
>sp|Q3ECD6|CLE1_ARATH CLAVATA3/ESR (CLE)-related protein 1 OS=Arabidopsis thaliana
GN=CLE1 PE=1 SV=1
Length = 74
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 54 ERLSSTIHRESDRVSPGGPDPQHH 77
E+L ES R+SPGGPDP+HH
Sbjct: 51 EKLMERGFNESMRLSPGGPDPRHH 74
>sp|Q8S8N0|CLE4_ARATH CLAVATA3/ESR (CLE)-related protein 4 OS=Arabidopsis thaliana
GN=CLE4 PE=2 SV=1
Length = 80
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 63 ESDRVSPGGPDPQHH 77
+S R+SPGGPDP+HH
Sbjct: 66 DSKRLSPGGPDPRHH 80
>sp|Q3EDH8|CLE3_ARATH CLAVATA3/ESR (CLE)-related protein 3 OS=Arabidopsis thaliana
GN=CLE3 PE=2 SV=1
Length = 83
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 14/15 (93%)
Query: 63 ESDRVSPGGPDPQHH 77
+S R+SPGGPDP+HH
Sbjct: 69 DSKRLSPGGPDPRHH 83
>sp|O49519|CLE2_ARATH CLAVATA3/ESR (CLE)-related protein 2 OS=Arabidopsis thaliana
GN=CLE2 PE=1 SV=1
Length = 75
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 62 RESDRVSPGGPDPQHH 77
+ +R+SPGGPDPQHH
Sbjct: 60 KSPERLSPGGPDPQHH 75
>sp|O24618|ESR2B_MAIZE CLAVATA3/ESR (CLE)-related protein 2-B OS=Zea mays GN=ESR2B PE=2
SV=1
Length = 132
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 2 LMLFFIVFSLLFMSFQARILHDEQQA----NAMQSNIDSQLLLRELGF--DLTKLKHYER 55
++ F+ + S A + ++ A N + N + ++ ++ GF +L + R
Sbjct: 10 ILSLFVCALVASTSVNANVWQTDEDAFYSTNKLGVNGNMEMAQQQGGFIGHRPRLASFNR 69
Query: 56 LSSTIHRESDRVSPGGPDPQHH 77
S + RE R P GPDP HH
Sbjct: 70 ASKQLDREK-RPVPSGPDPIHH 90
>sp|Q86RQ1|CLE2_HETGL CLAVATA3/ESR (CLE)-related protein 2 OS=Heterodera glycines GN=CLE2
PE=1 SV=1
Length = 138
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 63 ESDRVSPGGPDPQHH 77
ES R+SP GPDP HH
Sbjct: 124 ESKRLSPSGPDPHHH 138
>sp|Q68SA9|ATS7_MOUSE A disintegrin and metalloproteinase with thrombospondin motifs 7
OS=Mus musculus GN=Adamts7 PE=1 SV=3
Length = 1657
Score = 28.9 bits (63), Expect = 9.0, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 9 FSLLFMSFQARILHDEQQANAMQSNIDSQLLLRELGFDLTKLKHYERLSSTIHRESDRVS 68
+ L M+ A + HD N + +I ++L + DL H E R ++
Sbjct: 250 YVLTIMNMVAGLFHDPSIGNPIHISIVRLIILEDEEKDLKITHHAEETLKNFCRWQKNIN 309
Query: 69 PGGPD-PQHH 77
G D PQHH
Sbjct: 310 IKGDDHPQHH 319
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.138 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,798,337
Number of Sequences: 539616
Number of extensions: 807651
Number of successful extensions: 2746
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2734
Number of HSP's gapped (non-prelim): 11
length of query: 77
length of database: 191,569,459
effective HSP length: 48
effective length of query: 29
effective length of database: 165,667,891
effective search space: 4804368839
effective search space used: 4804368839
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)