Your job contains 1 sequence.
>039015
MTKKLYGLGRRVLTFPAVHPCESISPSTLLISLIDLAHDICTYKSEFFSTNKRNALKAIR
QVHNLLIFLEELRVESADIPGSLVISLSELHLTFQRIRYLLEDCTREGARLWMLMKSDRV
SNQLRLFIRAIGTALDVLPLAAIDVSSEVKELVDLVMRQARKAIFETDPDDKRVLNDVIR
ILGRFEDGIRPDKSEVKRVLDYLGITKWSQCNQEVKFLDSEITIEYLNVDKRSELALLSS
LMGFLSYCKCIMFDLVDNEASQQVSKKCCNNMLGGLTPDDFTCPISLEIMKDPVTLSTGH
TYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAEESGHKNR
DITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEV
GCIPSLLKLLSSKDSSTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEAR
QHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHW
RFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLAEKLDGTIAILHHGALDMIMKILDSC
TSRAGKEYCVSLLLALCINGGANVVALLVKSPSLMGSLYSLLSQGSSRASKKASALIRIL
HEFYERHSSGSTTPVLPQDRSVHVW
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039015
(685 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 1457 3.0e-149 1
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 1441 1.5e-147 1
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 743 1.4e-73 1
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 686 1.5e-67 1
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 671 5.8e-66 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 649 1.2e-63 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 646 2.6e-63 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 634 4.8e-62 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 617 3.1e-60 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 512 4.2e-55 2
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 568 4.8e-55 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 542 2.7e-52 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 312 5.3e-39 2
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 311 2.6e-38 2
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 306 9.8e-36 2
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 345 1.1e-30 1
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 187 2.2e-28 3
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 315 2.0e-27 1
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 282 7.5e-24 1
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 276 3.3e-23 1
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 197 5.1e-23 2
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 290 8.0e-23 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 236 1.6e-22 2
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 284 1.6e-22 1
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 281 3.9e-22 1
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 216 3.8e-20 2
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 181 6.7e-20 2
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 204 8.5e-20 2
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 260 1.5e-19 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 248 2.8e-18 1
TAIR|locus:1005716696 - symbol:AT1G08315 species:3702 "Ar... 236 3.5e-18 1
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 246 4.4e-18 1
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 171 5.0e-18 2
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 196 9.6e-18 2
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 235 8.2e-17 1
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 232 2.0e-16 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 233 2.1e-16 1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 189 4.5e-16 2
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 219 6.4e-15 1
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 178 1.0e-14 2
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 171 3.2e-14 2
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 200 9.6e-13 1
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 198 1.5e-12 1
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 173 7.2e-10 1
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 168 1.2e-09 1
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 151 5.1e-09 2
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 135 1.6e-08 2
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 160 1.9e-08 1
TAIR|locus:2135788 - symbol:AT4G12710 species:3702 "Arabi... 155 6.8e-08 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 156 7.7e-08 1
TAIR|locus:2087565 - symbol:AT3G20170 species:3702 "Arabi... 151 2.6e-07 1
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 147 6.1e-07 1
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 145 7.1e-07 1
CGD|CAL0001835 - symbol:VAC8 species:5476 "Candida albica... 147 1.0e-06 1
UNIPROTKB|Q59MN0 - symbol:VAC8 "Vacuolar protein 8" speci... 147 1.0e-06 1
TAIR|locus:2038598 - symbol:AT2G27430 "AT2G27430" species... 142 2.2e-06 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 142 2.5e-06 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 141 3.2e-06 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 144 3.5e-06 1
SGD|S000000739 - symbol:VAC8 "Phosphorylated and palmitoy... 140 5.7e-06 1
TAIR|locus:2145653 - symbol:AT5G14510 species:3702 "Arabi... 134 9.3e-06 1
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 136 1.1e-05 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 138 1.5e-05 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 134 1.9e-05 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 134 1.9e-05 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 135 1.9e-05 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 136 2.8e-05 2
POMBASE|SPBC354.14c - symbol:vac8 "vacuolar protein Vac8 ... 133 3.0e-05 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 132 3.6e-05 1
ASPGD|ASPL0000008980 - symbol:AN12408 species:162425 "Eme... 129 8.9e-05 1
TAIR|locus:2056529 - symbol:AT2G05810 "AT2G05810" species... 128 0.00011 1
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 129 0.00015 1
TAIR|locus:2040214 - symbol:AT2G25130 species:3702 "Arabi... 125 0.00018 1
TAIR|locus:2116792 - symbol:AT4G31890 "AT4G31890" species... 124 0.00026 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 126 0.00029 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 130 0.00032 2
TAIR|locus:2103351 - symbol:ARABIDILLO-2 "AT3G60350" spec... 125 0.00045 1
RGD|1310892 - symbol:Spag6 "sperm associated antigen 6" s... 121 0.00054 1
UNIPROTKB|O75602 - symbol:SPAG6 "Sperm-associated antigen... 121 0.00055 1
TAIR|locus:2079716 - symbol:CHIP "carboxyl terminus of HS... 119 0.00057 2
TAIR|locus:2043709 - symbol:AT2G45720 "AT2G45720" species... 121 0.00062 1
TAIR|locus:2055033 - symbol:ARABIDILLO-1 "AT2G44900" spec... 133 0.00091 2
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 1457 (517.9 bits), Expect = 3.0e-149, P = 3.0e-149
Identities = 307/695 (44%), Positives = 440/695 (63%)
Query: 7 GLGRRVLTFPAVHPCEXXXXXXXXXXXXXXAHDICTYKSEFFSTNKRNALKAIRQVHNLL 66
G GRR+LTFP V P E A DI T+KS+ FSTNK++ + +R++ NLL
Sbjct: 7 GSGRRILTFPTVEPSESISIVTLLDSLIQLAGDILTFKSKHFSTNKQSFRETLRRIQNLL 66
Query: 67 IFLEELRVESADI-----PGSLVISLSELHLTFQRIRYLLEDCTREGARLWMLMKSDRVS 121
+ EE+R+ + + SL E+H+ FQ++++LLEDCTR+GARL M+M SD+VS
Sbjct: 67 VVFEEIRIRIRNSRRYFHDSAAASSLKEIHVGFQKLKFLLEDCTRDGARLCMMMNSDQVS 126
Query: 122 NQLRLFIRAIGTALDVLPLAAIDVSSEVKELVDLVMRQARKAIFETDPDDKRVLNDVIRI 181
+ LR+ R+I T+L P+A++D+++EV EL+DLV+RQARK + + +DKR ++ + RI
Sbjct: 127 DHLRVLTRSISTSLSAFPVASVDLTTEVNELIDLVVRQARKYGVQPETNDKRAVSSINRI 186
Query: 182 LGRFEDGIRPDKSEVKRVLDYLGITKWSQCNQEVKFLDSEITIEYLNVDKRS---ELALL 238
L F + + PD E+ R+LD++GI KW C +E+ FL EI E L+ K+ ++ LL
Sbjct: 187 LALFVNRVVPDPDEINRILDHVGIRKWGDCVKEINFLGEEIDAERLDEKKKKSSDQVELL 246
Query: 239 SSLMGFLSYCKCIMFDLV---DNEASQQVSKKCCNNMLGGLTPDDFTCPISLEIMKDPVT 295
SSLMGF+ YC+CI+ + D+ + K ++++ GL +D CPISLEIM DPV
Sbjct: 247 SSLMGFICYCRCIILGRIERDDHHNHHEDGIKKDHDLIRGLKVEDLLCPISLEIMTDPVV 306
Query: 296 LSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAEES 355
+ TGHTYDR+SI KWF +GN TCP TG+ L S EL+ N+ ++++I+ NG+ +A S
Sbjct: 307 IETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRKHCKTNGIVLAGIS 366
Query: 356 GHKNRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRS 415
+ R V+ SLAA+GA KL+A F++ L+ G E + E+R+ TK+S FNRS
Sbjct: 367 --RRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRAVREIRVQTKTSSFNRS 424
Query: 416 CLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGL 475
CLV+ G + QENA+A +LNLSKH KS + G L +V+++ +G
Sbjct: 425 CLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHVTGKSKIAGEG-LKILVEILNEGA 483
Query: 476 KVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVR--DGTDRSKKNALVAIFGLL 533
K E R ++A+ LFY++S+E+Y +LIGENP+AIP L+++V+ D D +K++AL+A+ GLL
Sbjct: 484 KTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVMGLL 543
Query: 534 MHSGNHWRFLAAGAVPLLLNLLTSSD-SEELITDSLAVLATLAEKLDGTIAILHHGALDM 592
M S NHWR LAAGAVP+LL+LL S + S L D LA LA LAE DGTI ++ G L +
Sbjct: 544 MQSDNHWRVLAAGAVPILLDLLRSGEISGGLTADCLATLAKLAEYPDGTIGVIRRGGLKL 603
Query: 593 IMKILDSCTSR--AGKEYCVSLLLALCINGGANVVALLVKXXXXXXXXXXXXXXXXXRAS 650
+KIL S A K++CV L+L LC+NGG +VV +LVK S
Sbjct: 604 AVKILSSSEDSPVAVKQHCVGLILNLCLNGGRDVVGVLVKNSLVMGSLYTVLSNGEYGGS 663
Query: 651 KKASALIRILHEFYERHSSGSTTPVLPQDRSVHVW 685
KKASALIR++HEF ER +GS P L + R VH W
Sbjct: 664 KKASALIRMIHEFQER-KTGSVEPNLQRGRFVHAW 697
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 1441 (512.3 bits), Expect = 1.5e-147, P = 1.5e-147
Identities = 311/692 (44%), Positives = 438/692 (63%)
Query: 7 GLGRRVLTFPAVHPCEXXXXXXXXXXXXXXAHDICTYKSEFFSTNKRNALKAIRQVHNLL 66
G RR+LTFPAV+PCE A +I ++K + FSTNKR+ + +R V L+
Sbjct: 7 GSSRRILTFPAVNPCESISLTTLVDSLLQLAGEILSFKPKHFSTNKRSVKETLRHVQTLV 66
Query: 67 IFLEELRVES--ADIPG--SLVISLSELHLTFQRIRYLLEDCTREGARLWMLMKSDRVSN 122
IF EELR++ IP S+++SLSELH+ FQ++++LL+DCTR+GA+L+MLM S +VS
Sbjct: 67 IFFEELRIQIRVGSIPAGRSVILSLSELHVIFQKLKFLLDDCTRDGAKLYMLMNSGQVSA 126
Query: 123 QLRLFIRAIGTALDVLPLAAIDVSSEVKELVDLVMRQARKAIFETDPDDKRVLNDVIRIL 182
R R+I T+LD P+ ++D+ EV EL+ LVMRQ RK+ D DDKR ++ V
Sbjct: 127 HFRDLTRSISTSLDTFPVRSVDLPGEVNELIYLVMRQTRKSEARPDRDDKRAIDSVYWFF 186
Query: 183 GRFEDGIRPDKSEVKRVLDYLGITKWSQCNQEVKFLDSEITIEYLNVDKRS--ELALLSS 240
FE+ I P+ E+ RVLD++G+ KW C +E+ FL EI+ V K+S E+ LLS+
Sbjct: 187 NLFENRINPNSDEILRVLDHIGVRKWRDCVKEIDFLREEIS-----VGKKSNIEIELLSN 241
Query: 241 LMGFLSYCKCIMFDLVDNEASQQVSKKCCNNMLGGLTPDDFTCPISLEIMKDPVTLSTGH 300
LMGF+ YC+C++ +D + ++ ++ M+ L DD CPISLEIM DPV L +GH
Sbjct: 242 LMGFICYCRCVILRGIDVDDEEKDKEEDDLMMVRSLNVDDLRCPISLEIMSDPVVLESGH 301
Query: 301 TYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAEESGHKNR 360
TYDR+SI KWF +GN TCPKTG+ L S L+ N +K++IQ +S NGV + ++ G K
Sbjct: 302 TYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQSYSKQNGVVMGQK-GKKKV 360
Query: 361 DITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEV 420
D+ A SLAAE A KL A F++ L++G EE K E+R+LTK+S F RSCLVE
Sbjct: 361 DV-----AESLAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIRILTKTSTFYRSCLVEA 415
Query: 421 GCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKSMVV--ESGGLDFIVDMVKKGLKVE 478
G + QENA+A ++NLSK K+ +V + GGL IV+++ G + E
Sbjct: 416 GVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDGARRE 475
Query: 479 ARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVR--DGTDRSKKNALVAIFGLLMHS 536
+RQ+AAA LFY++S+ +Y +LIGE +AIP LV +V+ D D +K+NAL+AI LLM+
Sbjct: 476 SRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSAKRNALIAIRSLLMNQ 535
Query: 537 -GNHWRFLAAGAVPLLLNLLTSSDSEELIT-DSLAVLATLAEKLDGTIAILHHGALDMIM 594
NHWR LAAG VP+LL+L+ S + + +T DS+A+LA +AE DG I++L G L + +
Sbjct: 536 PDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILAKMAEYPDGMISVLRRGGLKLAV 595
Query: 595 KILDSC-TSRAGKEYCVSLLLALCINGGANVVALLVKXXXXXXXXXXXXXXXXXRASKKA 653
KIL S S A K++CV+LLL LC NGG++VV L K KKA
Sbjct: 596 KILGSSEVSPATKQHCVALLLNLCHNGGSDVVGSLAKNPSIMGSLYTASSNGELGGGKKA 655
Query: 654 SALIRILHEFYERHSSGSTTPVLPQDRSVHVW 685
SALI+++HEF ER +G PVL ++R VH W
Sbjct: 656 SALIKMIHEFQER-KTGPGEPVLERERFVHAW 686
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 743 (266.6 bits), Expect = 1.4e-73, P = 1.4e-73
Identities = 184/600 (30%), Positives = 311/600 (51%)
Query: 73 RVESADIPGSLVISLSELHLTFQRIRYLLEDCTREGARLWMLMKSDRVSNQLRLFIRAIG 132
R +S+ + ++ L EL+L R + L++ C + ++LW+L+++ +S + I
Sbjct: 93 RSKSSVSESTALLCLKELYLLLYRSKILVDYCA-QSSKLWLLLQNPSISGYFHDLNQEIS 151
Query: 133 TALDVLPLAAIDVSSEVKELVDLVMRQARKAIFETDPDDKRVLNDVIRILGRFEDGIRPD 192
T LDVLP+ + +S +++E ++L+ RQ+RKA D +D+ + L FE+G P
Sbjct: 152 TLLDVLPVNDLGLSDDIREQIELLQRQSRKARLYIDKNDESLRESFYSFLDGFENGKIPS 211
Query: 193 KSEVKRV-LDYLGITKWSQCNQEVKFLDSEITIEYLNVDKRSELALLSSLMGFLSYCKCI 251
+++ ++ LGI C E++FL+ +I + + + D ++++ + YC+ +
Sbjct: 212 SVDLRMFFVEKLGIRDSKSCRSEIEFLEEQI-VNH-DGDLEPTGSVINGFVAITRYCRFL 269
Query: 252 MFDLVDNEASQQVS---KKCCNNMLG---GLT----PDDFTCPISLEIMKDPVTLSTGHT 301
+F ++ + KK + G T P DF CPISL++M DPV +STG T
Sbjct: 270 LFGFEEDGMEWWIENNPKKPRKGFVAQEIGDTFITVPKDFVCPISLDLMTDPVIISTGQT 329
Query: 302 YDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAEESGHKNRD 361
YDR SI +W G+ TCPKTG+ L ++ N LK +I W +G+S E +
Sbjct: 330 YDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALKNLIVQWCTASGISYESEFTDSPNE 389
Query: 362 ITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVG 421
+ L A E A K + + L +G+ + A E+RLL K+ NR+ + E G
Sbjct: 390 SFASALPTKAAVE-ANKATVSILIKYLADGSQAAQTVAAREIRLLAKTGKENRAYIAEAG 448
Query: 422 CIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKSMVVESGG-LDFIVDMVKKGLKVEAR 480
IP QEN++ A+LNLS + K+KS ++E G L+ IV ++ GL VEA+
Sbjct: 449 AIPHLCRLLTSENAIAQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQ 508
Query: 481 QHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHW 540
++AAATLF ++++ EY+K I + + AL ++++GT R KK+A+ A++ L H N
Sbjct: 509 ENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCS 568
Query: 541 RFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLAEKLDGTIAI-LHHGALDMIMKILDS 599
R + G V L+ L + E + ++ LA L + G AI A+ +M ++
Sbjct: 569 RMIEGGGVSSLVGALKN---EGVAEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMM-R 624
Query: 600 CTSRAGKEYCVSLLLALCINGGANVVALLVKXXXXXXXXXXXXXXXXXRASKKASALIRI 659
C + GKE V+ LL LC +GGA V +++ RA +KA++L R+
Sbjct: 625 CGTPRGKENAVAALLELCRSGGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLARV 684
Score = 213 (80.0 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 56/231 (24%), Positives = 116/231 (50%)
Query: 40 ICTYKSEFFSTNKRNALKAIRQVHNLLIFLEEL----------------RVESADIPGSL 83
+ + S FS ++NA IR++ ++ E L R +S+ +
Sbjct: 44 VSCFTSVRFSFQRKNARSLIRKIEIFVVLFEFLVDSNWGSTTTRTRARRRSKSSVSESTA 103
Query: 84 VISLSELHLTFQRIRYLLEDCTREGARLWMLMKSDRVSNQLRLFIRAIGTALDVLPLAAI 143
++ L EL+L R + L++ C + ++LW+L+++ +S + I T LDVLP+ +
Sbjct: 104 LLCLKELYLLLYRSKILVDYCA-QSSKLWLLLQNPSISGYFHDLNQEISTLLDVLPVNDL 162
Query: 144 DVSSEVKELVDLVMRQARKAIFETDPDDKRVLNDVIRILGRFEDGIRPDKSEVKRV-LDY 202
+S +++E ++L+ RQ+RKA D +D+ + L FE+G P +++ ++
Sbjct: 163 GLSDDIREQIELLQRQSRKARLYIDKNDESLRESFYSFLDGFENGKIPSSVDLRMFFVEK 222
Query: 203 LGITKWSQCNQEVKFLDSEITIEYLNVDKRSELALLSSLMGFLSYCKCIMF 253
LGI C E++FL+ +I + + + D ++++ + YC+ ++F
Sbjct: 223 LGIRDSKSCRSEIEFLEEQI-VNH-DGDLEPTGSVINGFVAITRYCRFLLF 271
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 182/646 (28%), Positives = 331/646 (51%)
Query: 37 AHDICTYKSEFFSTNKRNALKAIRQVHNLLIFLEELRVESADI---PGSLVISLSELHLT 93
+H+I + + F +RN+L IR+V L +EL + + + S + E+ +
Sbjct: 41 SHEISSMQPLPFIL-RRNSLSLIRKVKILASVFDELLLPRSQLVVYSQSAHLCFEEMQIV 99
Query: 94 FQRIRYLLEDCTREGARLWMLMKSDRVSNQLRLFIRAIGTALDVLPLAAIDVSSEVKELV 153
QRI+ L++DC+R ++LW+L++ D V+ + + T LD+LPL D+S + ++L+
Sbjct: 100 MQRIKSLIDDCSRV-SKLWLLLQIDIVAFNFHELVTDLSTVLDILPLHDFDLSDDAQDLI 158
Query: 154 DLVMRQARKAIFETDPDDKRVLNDVIRILGRFEDGIRPDKSEVKRVLDYLGITKWSQCNQ 213
L+ +Q ++ D D + V + + I PD S + ++ + LG++ +
Sbjct: 159 SLLTKQCSDSVQFVDARDVALRRKVTDTIAGIKHQISPDHSTLIKIFNDLGLSDSASLTD 218
Query: 214 EVKFLDSEITIEYLNVDKRSELALLSSLMGFLSYCKCIMFDLVDNEASQQVSKKCCNNML 273
E++ L+ EI + +D RS+ A +SL+G + Y KC+++ ++ + ++
Sbjct: 219 EIQRLEDEIQDQ---IDDRSKSAA-ASLIGLVRYSKCVLY----GPSTPAPDFRRHQSLS 270
Query: 274 GGLTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVN 333
P DF CPI+LE+M+DPV ++TG TYDR SI W ++G++TCPKTG+ L+ L+ N
Sbjct: 271 DANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPN 330
Query: 334 LVLKRIIQDWSVDNGVSIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTS 393
LK +I W D + E G + A A K++ +F+ ++L +
Sbjct: 331 RALKNLIVLWCRDQKIPF-ELYGDGGGEP-----APCKEAVEFTKMMVSFLIEKL---SV 381
Query: 394 EEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCK 453
+ N V +E+R L KS R+C+ E G IP Q NA+ +LNLS +
Sbjct: 382 ADSNGVVFELRALAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNLSILEQ 441
Query: 454 SKSMVVES-GGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVD 512
+K+ ++E+ G L+ ++++++ G EA+ +AAATLF +A + YR+ +G + LVD
Sbjct: 442 NKTRIMETDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVD 501
Query: 513 MVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDS-EELITDSLAVL 571
+ + G SK++ALVAI L+ N RF+ AG + + D+ +EL +++AV+
Sbjct: 502 LAKQGPTSSKRDALVAILNLVAERENVGRFVEAGVMG------AAGDAFQELPEEAVAVV 555
Query: 572 ATLAEKLDGTIAILHHGALDMIMKILDSCTSRAG--KEYCVSLLLALCINGGANVVALLV 629
+ + G +A+ A +I + + A +E + L+ +C GG+ +VA +
Sbjct: 556 EAVVRR-GGLMAV--SAAFSLIRLLGEVMREGADTTRESAAATLVTMCRKGGSELVAEMA 612
Query: 630 KXXXXXXXXXXXXXXXXXRASKKASALIRILHEFY--ERHSSGSTT 673
R +KA++L+R L + + H++ + T
Sbjct: 613 AIPGIERVIWEMIGAGTARGGRKAASLMRYLRRWAAGDTHNTAAET 658
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 671 (241.3 bits), Expect = 5.8e-66, P = 5.8e-66
Identities = 194/655 (29%), Positives = 324/655 (49%)
Query: 50 TNKRNALKAIRQVHNLLIFLEELRVESAD---IPGSLVISLSELHLTFQRIRYLLEDCTR 106
+ +RN R++ L LE + +++A + + EL++ R L+
Sbjct: 61 SQRRNVDALARRLALLSAILESILLDTAAAGAFSDAANLCFRELYVVLFRAELLVSYVAS 120
Query: 107 EGARLWMLMKSDRVSNQLRLFIRAIGTALDVLPLAAIDVSSEVKELVDLVMRQAR-KAIF 165
G R W L++S ++ R + LDVLP A++ +S + L+DL+ R +A
Sbjct: 121 AG-RAWALLRSPHLAASFRDLDAELAVVLDVLPAASLRLSHDATGLLDLLRAHCRCRAPA 179
Query: 166 ET-DPDDKRVLNDVIRILGRFEDGIRPDKSEVKRVLDYLGITKWSQCNQEVKFLDSEITI 224
+ DPD+ + ++ L +F+ G PD ++ +L +GI+ + C E+ +L+ +I
Sbjct: 180 QYHDPDEAALRERLMDALRQFDLGQPPDHPSLQSLLADMGISTAASCRAEIDYLEEQI-- 237
Query: 225 EYLNVDKRSELALLSSLMGFLSYCKCIMFDLVDNEASQQV----SKKCCNNMLGG----- 275
L+ ++ ++L L+ S++ L YC +FD + +A + +++ ++ GG
Sbjct: 238 --LSQEEDTDLPLVGSVLALLRYCLFAVFDPSNAKALRDWPLSGNRQRLLSIGGGDDTSF 295
Query: 276 LTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLV 335
P +F+CPISL++M+DPV STG TYDR SI++W G+STCP +G+ L L+ N
Sbjct: 296 SVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRA 355
Query: 336 LKRIIQDWSVDNGVSIAEESGHKNRDITRTVLAG--SLAAEGAMKLLANFISDRLLEGTS 393
L+ +I W G+ +S N + V A S AA A K A + L +G+
Sbjct: 356 LRSLISQWCGVYGLQY--DSPESNEGMAECVAASCSSRAAMEANKATARILVRMLEDGSE 413
Query: 394 EEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCK 453
K A E+RLL K+ NR+ + ++G IP QENA+ ALLNLS
Sbjct: 414 NVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSNDWMAQENAVTALLNLSIFEP 473
Query: 454 SKSMVVESGG-LDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVD 512
+K ++E G L IV +++ G EA+++AAATLF ++ + ++KLI P A+ L
Sbjct: 474 NKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNEPGAVEELAS 533
Query: 513 MVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLA 572
M+ GT R KK+A++A+F L H + R L + AV L+ L + E +LA+L
Sbjct: 534 MLTKGTSRGKKDAVMALFNLSTHPESSARMLESCAVVALIQSLRNDTVSEEAAGALALLM 593
Query: 573 TLAEKLDGTIAILHHGALDMIMKILDSCTSRA---GKEYCVSLLLALCINGGANVVALLV 629
K + ++ G+ + ++ L R GKE VS L +C GG+ +V +
Sbjct: 594 ----KQPSIVHLV--GSSETVITSLVGLMRRGTPKGKENAVSALYEICRRGGSALVQRVA 647
Query: 630 KXXXXXXXXXXXXXXXXXRASKKASALIRILH--EFYERHSSGSTTPVLPQDRSV 682
K RA KKAS ++++ + + GST V+ DRS+
Sbjct: 648 KIPGLNTVIQTITLNGTKRAKKKASLIVKMCQRSQMPSAMALGSTLTVV--DRSL 700
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 184/585 (31%), Positives = 306/585 (52%)
Query: 46 EFFSTNKRNALKAIRQVHNLLIFLEELRVES-ADIPGSLVI-SLSELHLTFQRIRYLLED 103
E+ + +R L R++ L F+EELR + G +L+ L + LL
Sbjct: 44 EYRNAYRRQLLALSRRIRLLGPFVEELRERRRGEGEGEEEERALAPLADALEAALALLR- 102
Query: 104 CTREGARLWMLMKSDRVSNQLRLFIRAIGTALDVLPLAAIDVSSEVKELVDLVMRQARKA 163
REG+R+ ++++ D V + + I + AL +P +D+S EV+E V+LV Q ++A
Sbjct: 103 LGREGSRISLVLERDSVMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRA 162
Query: 164 IFETDPDDKRVLNDVIRILGRFEDGIRPDKSEVKRVLDYLGITKWSQCNQEVKFLDSEIT 223
D D ND++ + + D + + + R+ + L + + QE L E+
Sbjct: 163 KERIDMPDDEFYNDLLSVYDKNYDP-SAELAILGRLSEKLHLMTITDLTQESLALH-EMV 220
Query: 224 IEYLNVDKRSELALLSSLMGFLS-YCKCIMFDLVDNEASQQVSKKCCNNMLGGLTPDDFT 282
D + +S L+ + + + D+ AS+ + + + PD+F
Sbjct: 221 ASGGGQDPGEHIERMSMLLKKIKDFVQTQNPDMGPPMASRVLDSNGDSRPI--TIPDEFR 278
Query: 283 CPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQD 342
CPISLE+MKDPV +STG TY+RA I KW +G+ TCP T +++ + L N VL+ +I
Sbjct: 279 CPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQ 338
Query: 343 WSVDNGVSIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKNKVAYE 402
W NG+ + S N+ T S LL+ +L +EE+ A E
Sbjct: 339 WCETNGMEPPKRSTQPNKP---TPACSSSERANIDALLS-----KLCSPDTEEQRSAAAE 390
Query: 403 VRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKSMVVESG 462
+RLL K + NR C+ E G IP TQE+A+ ALLNLS H +K+ ++ SG
Sbjct: 391 LRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSG 450
Query: 463 GLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDRSK 522
+ IV ++K G +EAR++AAATLF ++ I+EY+ IG AIPALV ++ +G+ R K
Sbjct: 451 AVPSIVHVLKNG-SMEARENAAATLFSLSVIDEYKVTIG-GMGAIPALVVLLGEGSQRGK 508
Query: 523 KNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLAEKLDGTI 582
K+A A+F L ++ GN R + AG VPL++ L+T+ L+ +++A+L+ L+ +G
Sbjct: 509 KDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGA-LMDEAMAILSILSSHPEGKA 567
Query: 583 AILHHGALDMIMKILDSCTSRAGKEYCVSLLLALCINGGANVVAL 627
AI + ++++++ S T R +E +++L LC +G ++V L
Sbjct: 568 AIGAAEPVPVLVEMIGSGTPR-NRENAAAVMLHLC-SGEHHLVHL 610
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 181/605 (29%), Positives = 303/605 (50%)
Query: 59 IRQVHNLLIFLEELRVESADIPGSLVISLSELHLTFQRIRYLLEDCTREGARLWMLMKSD 118
+R++ L F EEL + ++ + + + L G++L+ L D
Sbjct: 41 VRRITLLSPFFEELIDVNVELKKDQITGFEAMRIALDSSLELFRS-VNGGSKLFQLFDRD 99
Query: 119 RVSNQLRLFIRAIGTALDVLPLAAIDVSSEVKELVDLVMRQARKAIFETDPDDKRVLNDV 178
+ + R I AL +P I+VS EV+E V L+ Q ++A + D ++ +D
Sbjct: 100 SLVEKFRDMTVEIEAALSQIPYEKIEVSEEVREQVQLLHFQFKRAKERWEESDLQLSHD- 158
Query: 179 IRILGRFEDGIRPDKSEVKRVLDYLGITKWSQCNQEVKFLDSEITIEYLNVDKRSELALL 238
L E+ + PD +KR+ L +T + +E + E + Y + D +
Sbjct: 159 ---LAMAENVMDPDPIILKRLSQELQLTTIDELKKESHAIH-EYFLSY-DGDPDDCFERM 213
Query: 239 SSLMGFLSYCKCIMFDLVDNEASQQVSKKCCNNMLGGLTPDDFTCPISLEIMKDPVTLST 298
SSL+ L + + D + S + + + P+ F CPISLE+MKDPV +ST
Sbjct: 214 SSLLKNL--VDFVTMESSDPDPS--TGSRIVSRHRSPVIPEYFRCPISLELMKDPVIVST 269
Query: 299 GHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAEESGHK 358
G TY+R+SI KW AG+ TCPK+ E L L N VLK +I W NG+ + + G
Sbjct: 270 GQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESNGIELPQNQGS- 328
Query: 359 NRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLV 418
RT G ++ + + ++L GT+E++ A E+RLL K ++ NR C+
Sbjct: 329 ----CRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIA 384
Query: 419 EVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVE 478
E G IP TQE+++ ALLNLS + +K +V++G + IV+++K G +E
Sbjct: 385 EAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNG-SME 443
Query: 479 ARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGN 538
AR++AAATLF ++ I+E + IG AI AL+ ++ +GT R KK+A AIF L ++ GN
Sbjct: 444 ARENAAATLFSLSVIDENKVAIGA-AGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGN 502
Query: 539 HWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLAEKLDGTIAILHHGALDMIMKILD 598
R + G V L LL + ++ ++LA+LA L+ +G AI ++ ++++I+
Sbjct: 503 KSRAVKGGIVDPLTRLLKDAGGG-MVDEALAILAILSTNQEGKTAIAEAESIPVLVEIIR 561
Query: 599 SCTSRAGKEYCVSLLLALCINGGANVVALLV-KXXXXXXXXXXXXXXXXXRASKKASALI 657
+ + R +E ++L LCI N+ L V + RA +KA++L+
Sbjct: 562 TGSPR-NRENAAAILWYLCIG---NIERLNVAREVGADVALKELTENGTDRAKRKAASLL 617
Query: 658 RILHE 662
++ +
Sbjct: 618 ELIQQ 622
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
Identities = 174/567 (30%), Positives = 285/567 (50%)
Query: 105 TREGARLWMLMKSDRVSNQLRLFIRAIGTALDVLPLAAIDVSSEVKELVDLVMRQARKAI 164
TR+G+++ M+ D ++ R I ALD LP + EV+E V LV Q ++A
Sbjct: 66 TRDGSKIDQAMRGDAFLDEFAGVNRQIHLALDALPYNTFHMPQEVQEQVALVHSQFQRAS 125
Query: 165 FETDPDDKRVLNDVIRILGRFEDGIRPDKSEVKRVLDYLGITKWSQCNQEVKFLDSEITI 224
TDP D ++ D+ L D D + + R+ L + + E L + +
Sbjct: 126 TRTDPPDTQLSMDLAWAL---TDN-PSDPALLTRISHKLQLHTMADMKNESIALHNMVIS 181
Query: 225 EYLNVDKRSELALLSSLMGFLSYCKCIMFDLVDNEASQQVSKKCCNNMLGGLTPDDFTCP 284
D + +SSL+ L C++ + N+A S + + PD+F CP
Sbjct: 182 TAGEPDGCVDQ--MSSLLKKLK--DCVVTEDHANDALTTRSASIKHR--SPIIPDEFRCP 235
Query: 285 ISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWS 344
ISLE+M+DPV +S+G TY+R+ I KW +G+ TCPKT + L L N VLK +I W
Sbjct: 236 ISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVLKSLISQWC 295
Query: 345 VDNGVSIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVR 404
NG+ + + +RD + + G + L+ +RL G +E+ A E+R
Sbjct: 296 EANGIELPKNK-QNSRD-KKAAKSSDYDHAGLVSLM-----NRLRSGNQDEQRAAAGEIR 348
Query: 405 LLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKSMVVESGGL 464
LL K ++ NR C+ E G IP TQE+A+ ALLNLS H +K+ +V+S +
Sbjct: 349 LLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASIVDSHAI 408
Query: 465 DFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKN 524
IV+++K G +E R++AAATLF ++ ++E + IG AIP L++++ DG+ R KK+
Sbjct: 409 PKIVEVLKTG-SMETRENAAATLFSLSVVDENKVTIGA-AGAIPPLINLLCDGSPRGKKD 466
Query: 525 ALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLAEKLDGTIAI 584
A AIF L ++ GN R + AG V L+N L +I ++L++L+ LA +G I I
Sbjct: 467 AATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGG-MIDEALSLLSILAGNPEGKIVI 525
Query: 585 LHHGALDMIMKILDSCTSRAGKEYCVSLLLALCINGGANVVALLVKXXXXXXXXXXXXXX 644
+ +++++ + + R +E ++L LC +A K
Sbjct: 526 ARSEPIPPLVEVIKTGSPR-NRENAAAILWLLCSADTEQTLA--AKAAGVEDALKELSET 582
Query: 645 XXXRASKKASALIRILHEFYERHSSGS 671
RA +KAS+++ ++H+ E G+
Sbjct: 583 GTDRAKRKASSILELMHQANEDSLKGN 609
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 177/581 (30%), Positives = 297/581 (51%)
Query: 45 SEFFSTNKRNALKAIRQVHNLLIFLEELRVESADIPGSLVISLSELHLTFQRIRYLLEDC 104
S++ T K+ R++ L+ EE+R + I + +L L + L+ C
Sbjct: 23 SDYRITVKKLCYNLARRLKLLVPMFEEIRESNEPISEDTLKTLMNLKEAMCSAKDYLKFC 82
Query: 105 TREGARLWMLMKSDRVSNQLRLFIRAIGTALDVLPLAAIDVSSEVKELVDLVMRQARKAI 164
+ +G++++++M+ ++V+++L + +L +P +D+S EV+E V+LV+ Q R+A
Sbjct: 83 S-QGSKIYLVMEREQVTSKLMEVSVKLEQSLSQIPYEELDISDEVREQVELVLSQFRRAK 141
Query: 165 FETDPDDKRVLNDVIRILGRFEDGIRPDKSEVKRVLDYLGITKWSQCNQEVKFLDSEITI 224
D D + D+ + + D + + ++RV L + + QE L +
Sbjct: 142 GRVDVSDDELYEDLQSLCNKSSD-VDAYQPVLERVAKKLHLMEIPDLAQESVALHEMVAS 200
Query: 225 EYLNVDKR-SELAL-LSSLMGFLSYCKCIMFDL---VDNEASQQVSKKCCNNMLGGLTPD 279
+V + E+A+ L + F+ + V++ ++ Q S + + PD
Sbjct: 201 SGGDVGENIEEMAMVLKMIKDFVQTEDDNGEEQKVGVNSRSNGQTSTAASQKI--PVIPD 258
Query: 280 DFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRI 339
DF CPISLE+M+DPV +S+G TY+R I KW G+STCPKT + L S L N VL+ +
Sbjct: 259 DFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLRSL 318
Query: 340 IQDWSVDNGVSIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFISD---RLLEGTSEEK 396
I W N + + R V + S AE AN I D RL G E++
Sbjct: 319 IAQWCEANDIEPPKPPSSLR---PRKVSSFSSPAE------ANKIEDLMWRLAYGNPEDQ 369
Query: 397 NKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKS 456
A E+RLL K + NR + E G IP QE+++ ALLNLS +K
Sbjct: 370 RSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKG 429
Query: 457 MVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRD 516
+V +G + IV ++KKG +EAR++AAATLF ++ I+E + IG AIP LV ++ +
Sbjct: 430 AIVSAGAIPGIVQVLKKG-SMEARENAAATLFSLSVIDENKVTIGALG-AIPPLVVLLNE 487
Query: 517 GTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLAE 576
GT R KK+A A+F L ++ GN + + AG +P L LLT S ++ ++LA+LA L+
Sbjct: 488 GTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSG-MVDEALAILAILSS 546
Query: 577 KLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLLLALC 617
+G I A+ +++ + + + R +E ++L+ LC
Sbjct: 547 HPEGKAIIGSSDAVPSLVEFIRTGSPR-NRENAAAVLVHLC 586
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 512 (185.3 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 127/387 (32%), Positives = 207/387 (53%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P+DF CPISLE+MKDP +STG TY+R+ I +W GN +CPKT ++L++ L N VL+
Sbjct: 244 PEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNYVLR 303
Query: 338 RIIQDWSVDNGVSIAEESGHKNRDITRTVLAGSLA-AEGAMKLLANFISDRLLEGTSEEK 396
+I W + +I + G+ N + GS G M + + +L + E++
Sbjct: 304 SLISQWCTKH--NIEQPGGYMNGRTKNS--DGSFRDLSGDMSAIRALVC-KLSSQSIEDR 358
Query: 397 NKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXX-TQENAIAALLNLSKHCKSK 455
E+R L+K S NR + E G IP TQENA+ +LNLS + +K
Sbjct: 359 RTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNK 418
Query: 456 SMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVR 515
+++ +G + IV +++ G +EAR++AAATLF ++ +E + +IG + AI ALVD+++
Sbjct: 419 ELIMLAGAVTSIVLVLRAG-SMEARENAAATLFSLSLADENKIIIGASG-AIMALVDLLQ 476
Query: 516 DGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLA 575
G+ R KK+A A+F L ++ GN R + AG V L+ +LT S SE + ++L +L+ LA
Sbjct: 477 YGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLA 536
Query: 576 EKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLLLALCINGGANVVALLVKXXXXX 635
AIL A+ ++ L R +E ++LL LC +++ +
Sbjct: 537 SNQVAKTAILRANAIPPLIDCLQKDQPR-NRENAAAILLCLCKRDTEKLIS--IGRLGAV 593
Query: 636 XXXXXXXXXXXXRASKKASALIRILHE 662
RA +KA++L+ +L +
Sbjct: 594 VPLMELSRDGTERAKRKANSLLELLRK 620
Score = 74 (31.1 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 35/125 (28%), Positives = 52/125 (41%)
Query: 48 FSTNKRNALKAIRQVHNLLIFLEELRVESADIPGSLVISL--------SELHLTFQRIRY 99
F K++ R+V L +EE+R S SL S+L + Q +
Sbjct: 25 FGLFKKDCSDLARRVGLLTHLIEEIRDSSPPSESDASSSLNSHECDWWSDLVVGLQAAKR 84
Query: 100 LLEDCTREGARLWMLMKSDRVSNQLRLFIRAIGTALDVLPLAAIDVSSEVKELVDLVMRQ 159
LL T AR + R+S Q + + AL L D+S EV+E V+L Q
Sbjct: 85 LLSSATSFQARESSDGAAKRISFQFQCVTWKLEKALGDLTYDRYDISDEVREQVELARLQ 144
Query: 160 ARKAI 164
R+A+
Sbjct: 145 LRRAM 149
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 180/574 (31%), Positives = 291/574 (50%)
Query: 52 KRNALKAIRQVHNLLIFLEELRVESADIPGSLVISLSELHLTFQRIRYLLEDCTR--EGA 109
K++ R+V L LEE+R +S I S S SE + + + L+ R A
Sbjct: 29 KKDCADLTRRVCLLTHLLEEIR-DSTPID-SAASSSSE-NDWWSDLVVGLQAAKRLLSTA 85
Query: 110 RLWMLMKSD----RVSNQLRLFIRAIGTALDVLPLAAIDVSSEVKELVDLVMRQARKAIF 165
R SD R+S Q + + AL LP D+S EV E V+L Q R+A+
Sbjct: 86 RFQARDSSDGAAKRISFQFQCVTWKLEKALSNLPYDLYDISDEVGEQVELARSQLRRAMQ 145
Query: 166 ETDPDDKRVLNDVIRILGRFEDGI-RP-DKSEVKRVLDYLGITKWSQCNQEVKFLDSEIT 223
LN +F + P ++ V+ K ++ + F + E
Sbjct: 146 RYGS-----LNS-----NKFSSALSEPMERDGFSNVIKIKAEEKLESVSETLHFGEEEEK 195
Query: 224 IEYLNVDKRSELALLSSLMGFLSYCKCIMFDLVDNEASQQVSKKCCNNMLGGLTPDDFTC 283
+ + S + SL +LS K D +D ++ + ++ L P DF C
Sbjct: 196 QSSPPLRRSSSI----SLAYYLS--KDADTDRLDKMVNKNTDESKKSDKL--TIPVDFLC 247
Query: 284 PISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDW 343
P+SLE+MKDPV ++TG TY+RA I +W GN TCPKT ++L++ L N VL+ +I W
Sbjct: 248 PVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLRSLISRW 307
Query: 344 SVDNGVSIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEV 403
++ +I + +G+ N RT +G ++ ++ L +S R T + +N V+ E+
Sbjct: 308 CAEH--NIEQPAGYING---RTKNSGDMSV---IRALVQRLSSR---STEDRRNAVS-EI 355
Query: 404 RLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKSMVVESGG 463
R L+K S NR + E G IP TQENAI +LNLS + +K +++ +G
Sbjct: 356 RSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGA 415
Query: 464 LDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDRSKK 523
+ IV +++ G +EAR++AAATLF ++ +E + +IG + AIPALVD++ +GT R KK
Sbjct: 416 VTSIVQVLRAGT-MEARENAAATLFSLSLADENKIIIGGSG-AIPALVDLLENGTPRGKK 473
Query: 524 NALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLAEKLDGTIA 583
+A A+F L ++ GN R + AG V L+ +L+ S ++ ++L +L+ LA D A
Sbjct: 474 DAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSA 533
Query: 584 ILHHGALDMIMKILDSCTSRAGKEYCVSLLLALC 617
I+ L ++ IL + +R +E ++LL+LC
Sbjct: 534 IVKANTLPALIGILQTDQTR-NRENAAAILLSLC 566
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 156/555 (28%), Positives = 270/555 (48%)
Query: 50 TNKRNALKAIRQVHNLLIFLEELRVESADIPGSLVISLSELHLTFQRIRYLLEDCTREGA 109
T ++ +R++ L+ FL+E+R + P S L+ L F + LLE C+ G+
Sbjct: 73 TQQKECFNLVRRLKILIPFLDEIR--GFESP-SCKHFLNRLRKVFLAAKKLLETCSN-GS 128
Query: 110 RLWMLMKSDRVSNQLRLFIRAIGTALDVLPLAAIDVSSEVKELVDLVMRQARKAIFETDP 169
+++M + + + + + L P + +S + K+ +D + +Q +KA TD
Sbjct: 129 KIYMALDGETMMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEIDSLCKQLKKAKRRTDT 188
Query: 170 DDKRVLNDVIRILGRFEDGIRPDKSEVKRVLDYLGITKWSQCNQEVKFLDSEITIEY-LN 228
D + D++ + + D D + ++R+ L + E + S I + LN
Sbjct: 189 QDIELAVDMMVVFSK-TDPRNADSAIIERLAKKLELQTIDDLKTETIAIQSLIQDKGGLN 247
Query: 229 VDKRSELALLSSLMGFLSYCKCIMFDLVDNEASQQVSKKCCNNMLGGLTPDDFTCPISLE 288
++ + + L + L + D++ Q V K + P +F CPI+LE
Sbjct: 248 IETKQHIIELLNKFKKLQGLEAT--DIL----YQPVINKAITKSTSLILPHEFLCPITLE 301
Query: 289 IMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDNG 348
IM DPV ++TG TY++ SI KWF AG+ TCPKT + L L N LK +I W N
Sbjct: 302 IMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQWCEKNN 361
Query: 349 VSIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTK 408
I E+ + + + + LL +S LE E++ V ++RLL +
Sbjct: 362 FKIPEKEVSPDSQNEQ---------KDEVSLLVEALSSSQLE---EQRRSVK-QMRLLAR 408
Query: 409 SSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKSMVVESGGLDFIV 468
+ NR + G IP QENA+ LLNLS +K ++ G + I+
Sbjct: 409 ENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNII 468
Query: 469 DMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVA 528
++++ G + EAR+++AA LF ++ ++E + IG + IP LVD+++ GT R KK+AL A
Sbjct: 469 EILENGNR-EARENSAAALFSLSMLDENKVTIGLS-NGIPPLVDLLQHGTLRGKKDALTA 526
Query: 529 IFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLAEKLDGTIAILHHG 588
+F L ++S N R + AG V LLNLL + +I ++L++L LA +G AI
Sbjct: 527 LFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLG-MIDEALSILLLLASHPEGRQAIGQLS 585
Query: 589 ALDMIMKILDSCTSR 603
++ +++ + T +
Sbjct: 586 FIETLVEFIRQGTPK 600
Score = 312 (114.9 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 85/279 (30%), Positives = 146/279 (52%)
Query: 382 NFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENA 441
+ + + L EE+ + ++RLL + + NR + G IP QENA
Sbjct: 382 SLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENA 441
Query: 442 IAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIG 501
+ LLNLS +K ++ G + I+++++ G + EAR+++AA LF ++ ++E + IG
Sbjct: 442 VTTLLNLSIDEVNKKLISNEGAIPNIIEILENGNR-EARENSAAALFSLSMLDENKVTIG 500
Query: 502 ENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSE 561
+ IP LVD+++ GT R KK+AL A+F L ++S N R + AG V LLNLL +
Sbjct: 501 LS-NGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLG 559
Query: 562 ELITDSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLLLALCINGG 621
+I ++L++L LA +G AI ++ +++ + T + KE S+LL L N
Sbjct: 560 -MIDEALSILLLLASHPEGRQAIGQLSFIETLVEFIRQGTPK-NKECATSVLLELGSNNS 617
Query: 622 ANVVALLVKXXXXXXXXXXXXXXXXXRASKKASALIRIL 660
+ ++A L RA +KA+ALI+++
Sbjct: 618 SFILAAL--QFGVYEYLVEITTSGTNRAQRKANALIQLI 654
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 312 (114.9 bits), Expect = 5.3e-39, Sum P(2) = 5.3e-39
Identities = 86/252 (34%), Positives = 144/252 (57%)
Query: 368 AGSLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXX 427
+G++ +KL + D L G+++ K A E+R LT +SI NR + G I
Sbjct: 466 SGTMTTSHTIKL----VED-LKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLL 520
Query: 428 XXXXXXXXXTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATL 487
TQE+A+ ALLNLS +K+M+VE G ++ +V ++ G A++++AA+L
Sbjct: 521 SLLYSEEKLTQEHAVTALLNLSISELNKAMIVEVGAIEPLVHVLNTG-NDRAKENSAASL 579
Query: 488 FYIASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGA 547
F ++ ++ R+ IG++ AI ALV+++ GT R KK+A A+F L + N R + A A
Sbjct: 580 FSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKA 639
Query: 548 VPLLLNLLTSSDSEELITDSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKE 607
V L+ LL D E ++ ++A+LA L+ +G AI+ G + ++++ +D + R GKE
Sbjct: 640 VKYLVELL-DPDLE-MVDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQR-GKE 696
Query: 608 YCVSLLLALCIN 619
S+LL LC+N
Sbjct: 697 NAASVLLQLCLN 708
Score = 184 (69.8 bits), Expect = 5.3e-39, Sum P(2) = 5.3e-39
Identities = 58/222 (26%), Positives = 105/222 (47%)
Query: 140 LAAIDVSSEVKELVDLVMRQARKA-IFETDPDDKRVLNDVIRILGRFEDGIRPDKSEVKR 198
L + SS V V V R ++ F+ + ++ + +R + +D D + ++
Sbjct: 114 LLQLSQSSPVTSSVQSVERCVQETESFKQEGTLMELMENALR--NQKDDITSLDNNHLES 171
Query: 199 VLDYLGITKWSQCNQEVKFLDSEITIEYLNVDKRSELAL--LSSLMGFLSYCKCIMFDLV 256
++ LG+ NQ++ L IT+E + ++ + + + CI ++
Sbjct: 172 IIQMLGLIS----NQDL--LKESITVEKERIRSQASKSEEDMEQTEQLIELVLCIREHML 225
Query: 257 DNEASQQVSKKCCNNMLGGLTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNS 316
E + V+K G P F CP+S E+M DPV +++G T+DR SI KW G +
Sbjct: 226 KTEFLE-VAK-------GISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLA 277
Query: 317 TCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAEESGHK 358
CP+T + L +EL+ N +K +I W N +++A S H+
Sbjct: 278 VCPRTRQVLTHQELIPNYTVKAMIASWLEANRINLATNSCHQ 319
Score = 98 (39.6 bits), Expect = 9.0e-16, Sum P(2) = 9.0e-16
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 439 ENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIA-SIEEYR 497
+ A+A L NLS + + +V GG+ +V+ V G + +++AA+ L + + ++
Sbjct: 655 DKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQ-RGKENAASVLLQLCLNSPKFC 713
Query: 498 KLIGENPEAIPALVDMVRDGTDRSKKNA 525
L+ + AIP LV + + GT R+K+ A
Sbjct: 714 TLVLQEG-AIPPLVALSQSGTQRAKEKA 740
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 311 (114.5 bits), Expect = 2.6e-38, Sum P(2) = 2.6e-38
Identities = 85/284 (29%), Positives = 149/284 (52%)
Query: 386 DRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAAL 445
+ L + + + + E+RLL K ++ NR + G I TQENA+ AL
Sbjct: 551 EELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTAL 610
Query: 446 LNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPE 505
LNLS + +K + ++G ++ ++ +++ G EA++++AATLF ++ IEE + IG++
Sbjct: 611 LNLSINDNNKKAIADAGAIEPLIHVLENGSS-EAKENSAATLFSLSVIEENKIKIGQSG- 668
Query: 506 AIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELIT 565
AI LVD++ +GT R KK+A A+F L +H N + +GAV L++L+ + ++
Sbjct: 669 AIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAG--MVD 726
Query: 566 DSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLLLALCINGGANVV 625
++AVLA LA +G AI G + +++++++ ++R GKE + LL L N G
Sbjct: 727 KAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSAR-GKENAAAALLQLSTNSGR--F 783
Query: 626 ALLVKXXXXXXXXXXXXXXXXXRASKKASALIRILHEFYERHSS 669
+V RA +KA AL+ +RH +
Sbjct: 784 CNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRN--QRHGN 825
Score = 180 (68.4 bits), Expect = 2.6e-38, Sum P(2) = 2.6e-38
Identities = 51/192 (26%), Positives = 99/192 (51%)
Query: 219 DSEITIEYLNVDKRSELALLSSLMGFLSYCKCIMFDLVDNEASQQVS--KKCCNNMLGGL 276
+ EI IE + ++++ E+A S + + ++ ++ N +++ K+ + + L
Sbjct: 177 NQEILIEAVALERQKEMAEQSENNAEVEFLDQLI--VIVNRMHERLLLIKQTQTSSVAIL 234
Query: 277 TPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVL 336
DF CP+SLE+M DPV +S+G TY++A I +W G CPKT + L L+ N +
Sbjct: 235 A--DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTV 292
Query: 337 KRIIQDWSVDNGVSIAEESGHKNRDITRTVLA--GSLAAEGAMKLLANFISDRL--LEGT 392
K +I +W N V + + + + + +L+ S+ + GA + A +S++ + +
Sbjct: 293 KALIANWCETNDVKLPDPNKSTSLNELSPLLSCTDSIPSTGA-DVSARKVSNKSHDWDAS 351
Query: 393 SEEKNKVAYEVR 404
S E K ++ R
Sbjct: 352 SSETGKPSFSSR 363
Score = 84 (34.6 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 31/129 (24%), Positives = 66/129 (51%)
Query: 491 ASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLA-AGAVP 549
A E R+ + E + LV+ ++ + +++ A + L H+ ++ + +GA+
Sbjct: 530 APSNETRRDLSEVETQVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIV 589
Query: 550 LLLNLLTSSDSEELITDSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYC 609
LL+ LL S+DS +++ L L+ + AI GA++ ++ +L++ +S A KE
Sbjct: 590 LLVELLYSTDSATQ-ENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEA-KENS 647
Query: 610 VSLLLALCI 618
+ L +L +
Sbjct: 648 AATLFSLSV 656
Score = 53 (23.7 bits), Expect = 5.3e-25, Sum P(2) = 5.3e-25
Identities = 33/131 (25%), Positives = 53/131 (40%)
Query: 209 SQCNQEVKFLDSEITI-----EYLNVDKRSELALLSSLMGFLSYCKC---IMFDLVDNEA 260
S+ N EV+FLD I I E L + K+++ + ++ L F +C +M D V +
Sbjct: 197 SENNAEVEFLDQLIVIVNRMHERLLLIKQTQTSSVAILADF--FCPLSLEVMTDPVIVSS 254
Query: 261 SQQVSKKCCNNMLG-GLTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCP 319
Q K + GL CP + + + TL +T +A I W + P
Sbjct: 255 GQTYEKAFIKRWIDLGLK----VCPKTRQTLTH-TTLIPNYTV-KALIANWCETNDVKLP 308
Query: 320 KTGERLQSKEL 330
+ EL
Sbjct: 309 DPNKSTSLNEL 319
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 306 (112.8 bits), Expect = 9.8e-36, Sum P(2) = 9.8e-36
Identities = 75/232 (32%), Positives = 128/232 (55%)
Query: 386 DRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAAL 445
D L + + + + +R+L ++S NR + IP Q +A+ L
Sbjct: 428 DDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQADAVTCL 487
Query: 446 LNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPE 505
LNLS + +KS++ ESG + ++ ++K G EA+ ++AATLF ++ IEEY+ IGE
Sbjct: 488 LNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGE-AG 546
Query: 506 AIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELIT 565
AI LVD++ G+ KK+A A+F L +H N + + AGAV L+ L+ + ++
Sbjct: 547 AIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFG--MVE 604
Query: 566 DSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLLLALC 617
++ VLA LA +G IAI G + +++++++ ++R GKE + LL LC
Sbjct: 605 KAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSAR-GKENATAALLQLC 655
Score = 158 (60.7 bits), Expect = 9.8e-36, Sum P(2) = 9.8e-36
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P DF C +SLE+M DPV +++G T++R I KW G CPKT + L L N +++
Sbjct: 241 PSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIVR 300
Query: 338 RIIQDWSVDNGV 349
+ W N V
Sbjct: 301 AFLASWCETNNV 312
Score = 149 (57.5 bits), Expect = 2.5e-18, Sum P(2) = 2.5e-18
Identities = 50/190 (26%), Positives = 89/190 (46%)
Query: 370 SLAAE-GAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXX 428
SL AE GA+ L + + LE + + ++ + ++ + E G I
Sbjct: 498 SLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEY----KTEIGEAGAIEPLVD 553
Query: 429 XXXXXXXXTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLF 488
+++A AL NLS H ++K+ V+E+G + ++V+++ + + A L
Sbjct: 554 LLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELMDPAFGMVEK--AVVVLA 611
Query: 489 YIASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWR-FLAAGA 547
+A++ E + IGE IP LV++V G+ R K+NA A+ L HS + G
Sbjct: 612 NLATVREGKIAIGEEG-GIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVIREGV 670
Query: 548 VPLLLNLLTS 557
+P L+ L S
Sbjct: 671 IPPLVALTKS 680
Score = 94 (38.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 30/115 (26%), Positives = 53/115 (46%)
Query: 413 NRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVK 472
N++ ++E G + E A+ L NL+ + K + E GG+ +V++V+
Sbjct: 579 NKTKVIEAGAVRYLVELMDPAFGMV-EKAVVVLANLATVREGKIAIGEEGGIPVLVEVVE 637
Query: 473 KGLKVEARQHAAATLFYIA--SIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNA 525
G +++A A L + S + +I E IP LV + + GT R K+ A
Sbjct: 638 LG-SARGKENATAALLQLCTHSPKFCNNVIREG--VIPPLVALTKSGTARGKEKA 689
Score = 64 (27.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 25/113 (22%), Positives = 54/113 (47%)
Query: 507 IPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLA-AGAVPLLLNLLTSSDSEELIT 565
+ L+D ++ + +++ A I L +S ++ +A A+P L++LL S+D E +
Sbjct: 423 VKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTD-ERIQA 481
Query: 566 DSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLLLALCI 618
D++ L L+ + I GA+ ++ +L + K + L +L +
Sbjct: 482 DAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSV 534
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 345 (126.5 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 108/372 (29%), Positives = 181/372 (48%)
Query: 259 EAS-QQVSKKCCNNMLGGLT-PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNS 316
EA+ ++++K ML ++ P++F CP+S E+M+DPV L++G TYD+ I KW +GN
Sbjct: 54 EATMRKMAKSSSLEMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNR 113
Query: 317 TCPKTGERLQSKELLVNLVLKRIIQDWSVDNGVSIAEESGHKNR-DITRTVLAGSLAAEG 375
TCPKT + L L NL+++ +I W NG+ + H N + TV E
Sbjct: 114 TCPKTQQVLPHTALTPNLLIREMISKWCKKNGLETKSQY-HPNLVNEDETVTRSD--REI 170
Query: 376 AMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKS-----SIFNRSCLVEVGCIPXXXXXX 430
LL S L +++ A E+RLLT+ ++F S E+ +
Sbjct: 171 FNSLLCKVSSSNL-----QDQKSAAKELRLLTRKGTEFRALFGESP-DEITRLVNPLLHG 224
Query: 431 XXXXXXTQENAIAALLNLSKHCKS-KSMVVESGG-LDFIVDMVKKGLKVEARQHAAATLF 488
QE+ + LLN+S H S K +V E+ + ++D +++G V R +AAA +F
Sbjct: 225 SNPDEKLQEDVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGT-VATRSNAAAAIF 283
Query: 489 YIASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAV 548
+++++ + LIG++ P L+D++ +G + K+ AIF L + N R + GAV
Sbjct: 284 TLSALDSNKVLIGKSGILKP-LIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAV 342
Query: 549 PLLLNLLTSSDSEELITDSL-AVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKE 607
+L S L D L A+LA L + G + ++KI + KE
Sbjct: 343 ----RVLGKKISNGLYVDELLAILAMLVTHWKAVEELGELGGVSWLLKITRESECKRNKE 398
Query: 608 YCVSLLLALCIN 619
+ +L +C +
Sbjct: 399 NAIVILHTICFS 410
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 187 (70.9 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 31/76 (40%), Positives = 50/76 (65%)
Query: 276 LTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLV 335
+ P++ CPISL++M DPV +++G TY+R I KWF G+++CPKT ++L L N
Sbjct: 274 IPPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYC 333
Query: 336 LKRIIQDWSVDNGVSI 351
+K +I W NG+++
Sbjct: 334 VKGLIASWCEQNGITV 349
Score = 150 (57.9 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 71/302 (23%), Positives = 136/302 (45%)
Query: 374 EGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXX 433
EG +LA I D+ E +K KV VR+L K + R + G +
Sbjct: 423 EGYQDILA--IVDK--EEDLAKKCKVVENVRILLKDNEEARILMGANGFVEAFLQFLESA 478
Query: 434 X----XXTQENAIAALLNLS-KHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLF 488
QE AL NL+ + ++K +++ SG ++ +++K + Q A L+
Sbjct: 479 VHDNNAAAQETGAMALFNLAVNNNRNKELMLTSG----VIPLLEKMISCSQSQGPATALY 534
Query: 489 Y-IASIEEYRKLIGENPEAIPALVDMV-RDGTDRSKKNALVAIFGLLMHSGNHWRFLAAG 546
++ +E+ + +IG + +A+ V+++ +D + K +AL A++ L +S N L++
Sbjct: 535 LNLSCLEKAKPVIGSS-QAVSFFVNLLLQDTKTQCKLDALHALYNLSTYSPNIPTLLSSN 593
Query: 547 AVPLLLNLLTSSDSEELITDSLAVLATLAEKLDGTIAILH-HGALDMIMKILDSCTSRAG 605
+ L +L S+ + I SLAVL LA +G ++ G + + +LD+ +
Sbjct: 594 IIKSL-QVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDT-VE 651
Query: 606 KEYCVSLLLALCINGGANVVALLVKXXXXXXXXXXXXXXXXXRASKKASALIRILHEFYE 665
+E VS L+ LC G + + ++++ R K+ L+ + E +
Sbjct: 652 QEQAVSCLVILC-TGSESCIQMVLQEGVIPSLVSISVNGSP-RGRDKSQKLLMLFRE--Q 707
Query: 666 RH 667
RH
Sbjct: 708 RH 709
Score = 111 (44.1 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 55/212 (25%), Positives = 98/212 (46%)
Query: 65 LLIF--LEELRVESADIPGSLVISLSELHLTFQRIRYLLEDCTREGARLWMLMKSDRVSN 122
L IF LEE R S S + +L LH+ ++ + +L+ C+ E ++L++ + D V
Sbjct: 34 LSIFPSLEEARPRSK----SGIQTLCSLHIALEKAKNILQHCS-ECSKLYLAITGDAV-- 86
Query: 123 QLRLFIRAIGTALDVLPLAAIDVSSEV-KELVDLVMRQARKAIFETDPDDKRVLNDVIRI 181
L F +A +D L V S + +++D+V + F DP +K V + +I +
Sbjct: 87 -LLKFEKAKSALIDSLRRVEDIVPSSIGSQILDIV-GELEHTKFLLDPSEKEVGDRIIAL 144
Query: 182 L--GR-FEDGIRPDKSEV-KRVLDYLGITKWSQCNQEVKFLDSEITIEYLNVDKRSELAL 237
L G+ F++G + E+ + L IT E + L I + DKR E ++
Sbjct: 145 LQQGKKFDNGSDSTELEIFHQAATRLSITSSRSALAERRALKKVIDRARVEEDKRKE-SI 203
Query: 238 LSSLMGFL-SYCKCIMFDLVDNEASQQVSKKC 268
++ L+ + Y K +++D E S C
Sbjct: 204 VAYLLHLMRKYSKLFRSEMMD-ENDSPCSTPC 234
Score = 92 (37.4 bits), Expect = 2.1e-22, Sum P(3) = 2.1e-22
Identities = 48/248 (19%), Positives = 99/248 (39%)
Query: 371 LAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXX 430
+ A G ++ F+ + + + + A + L ++ N+ ++ G IP
Sbjct: 462 MGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTSGVIPLLEKMI 521
Query: 431 XXXXXXTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYI 490
+Q A A LNLS K+K ++ S + F V+++ + K + + A L+ +
Sbjct: 522 SCSQ--SQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCKLDALHALYNL 579
Query: 491 ASIE-EYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLM-HSGNHWRFLAAGAV 548
++ L+ N I +L + G + +L + L G G +
Sbjct: 580 STYSPNIPTLLSSN--IIKSLQVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMI 637
Query: 549 PLLLNLLTSSDS--EELITDSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGK 606
L +L + D+ +E L +L T +E +L G + ++ I + + R G+
Sbjct: 638 STLATVLDTGDTVEQEQAVSCLVILCTGSESC--IQMVLQEGVIPSLVSISVNGSPR-GR 694
Query: 607 EYCVSLLL 614
+ LL+
Sbjct: 695 DKSQKLLM 702
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 315 (115.9 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 91/281 (32%), Positives = 138/281 (49%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLV-NLVL 336
P+DF CPISLEIM DPV L +GHT+DR SI +W +GN TCP T L L+ N L
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHAL 65
Query: 337 KRIIQDWSVDNGVSIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEK 396
+ +I +++ VS+ E S RT S + A L++ +S + +
Sbjct: 66 RSLILNFA---HVSLKESSR------PRTQQEHSHSQSQA--LISTLVSQS--SSNASKL 112
Query: 397 NKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKS 456
+ VRL + S R + E G + QE +++ LLNLS +K
Sbjct: 113 ESLTRLVRLTKRDSSIRRK-VTESGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNKV 171
Query: 457 MVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRD 516
+V G + IV +++ G + + AA L +A +E + IG P+AI ALV ++R
Sbjct: 172 GLVADGVIRRIVTVLRVG-SPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRV 230
Query: 517 GTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTS 557
G DR +K + A++ L N R + G+VP+L+ S
Sbjct: 231 GNDRERKESATALYALCSFPDNRKRVVDCGSVPILVEAADS 271
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 282 (104.3 bits), Expect = 7.5e-24, P = 7.5e-24
Identities = 82/294 (27%), Positives = 148/294 (50%)
Query: 370 SLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXX 429
S A + + ++ N I+ + EE+ + A E+RLL+K+ NR L + G I
Sbjct: 52 SCAVDNSDDVIRNLITHLESSSSIEEQKQAAMEIRLLSKNKPENRIKLAKAGAIKPLVSL 111
Query: 430 XXXXXXXTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFY 489
QE + A+LNLS ++K M+V SG + +V+ ++ G +++AA L
Sbjct: 112 ISSSDLQLQEYGVTAVLNLSLCDENKEMIVSSGAVKPLVNALRLGTPT-TKENAACALLR 170
Query: 490 IASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVP 549
++ +EE + IG + AIP LV+++ +G R+KK+A A++ L + N R + +G +
Sbjct: 171 LSQVEENKITIGRSG-AIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMK 229
Query: 550 LLLNLLTSSDSEELITDSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYC 609
L+ L+ +S+ ++ S V+ L + A++ G + ++++I+++ T R KE
Sbjct: 230 PLVELMIDFESD-MVDKSAFVMNLLMSAPESKPAVVEEGGVPVLVEIVEAGTQRQ-KEIS 287
Query: 610 VSLLLALCINGGANVVALLVKXXXXXXXXXXXXXXXXXRASK-KASALIRILHE 662
VS+LL LC + V +V R +K KA ALI +L +
Sbjct: 288 VSILLQLCEE--SVVYRTMVAREGAVPPLVALSQGSASRGAKVKAEALIELLRQ 339
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 276 (102.2 bits), Expect = 3.3e-23, P = 3.3e-23
Identities = 83/293 (28%), Positives = 143/293 (48%)
Query: 370 SLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXX 429
S A+E + L+ + +S + +E+ + A E+RLL+K+ NR + + G I
Sbjct: 54 SCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISL 113
Query: 430 XXXXXXXTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFY 489
QE + A+LNLS ++K + SG + +V +K G A+++AA L
Sbjct: 114 ISSSDLQLQEYGVTAILNLSLCDENKESIASSGAIKPLVRALKMGTPT-AKENAACALLR 172
Query: 490 IASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVP 549
++ IEE + IG + AIP LV+++ G R+KK+A A++ L N R + +G +
Sbjct: 173 LSQIEENKVAIGRSG-AIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMK 231
Query: 550 LLLNLLTSSDSEELITDSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYC 609
L+ L+ S ++ S V++ L + AI+ G + ++++I++ T R KE
Sbjct: 232 PLVELMADFGSN-MVDKSAFVMSLLMSVPESKPAIVEEGGVPVLVEIVEVGTQRQ-KEMA 289
Query: 610 VSLLLALCINGGANVVALLVKXXXXXXXXXXXXXXXXXRASKKASALIRILHE 662
VS+LL LC + V +V RA +KA ALI +L +
Sbjct: 290 VSILLQLCEE--SVVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQ 340
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 197 (74.4 bits), Expect = 5.1e-23, Sum P(2) = 5.1e-23
Identities = 58/186 (31%), Positives = 90/186 (48%)
Query: 171 DKRVLNDVIRILGRFEDGIRPDKSEVKRVLDYLGITKWSQCNQEVKFLDSEITIEYLNVD 230
++R L +I R ED R K + L +L + K+S K SEI + +
Sbjct: 181 ERRCLKKLIE-RARMEDDKR--KESIVAYLLHL-MRKYS------KLFRSEIWDDN-DSQ 229
Query: 231 KRSELALLSSLMGFLSYCKCIMFDLVDNEASQQVSKKCCNNMLGG---LTPDDFTCPISL 287
S L ++ G + FD ++ S + C NN + P++ CPISL
Sbjct: 230 GSSSLPCSPTIQGSIDDAHGRAFDRQLSKLSSFNFRSCNNNRRSSQMSVPPEELRCPISL 289
Query: 288 EIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKRIIQDWSVDN 347
++M DPV +++G TY+R I KWF G++TCPKT ++L L N +K +I W N
Sbjct: 290 QLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVKALISSWCEQN 349
Query: 348 GVSIAE 353
GV + +
Sbjct: 350 GVQVPD 355
Score = 154 (59.3 bits), Expect = 5.1e-23, Sum P(2) = 5.1e-23
Identities = 71/292 (24%), Positives = 128/292 (43%)
Query: 392 TSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXX----XXTQENAIAALLN 447
T +K +V ++R+L K R + E GC+ Q+ AL N
Sbjct: 435 TLRKKCRVVEQIRVLLKDDEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFN 494
Query: 448 LS-KHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYI--ASIEEYRKLIGENP 504
L+ + ++K +++ SG + + +M+ H + T Y+ + +EE + +IG +
Sbjct: 495 LAVDNNRNKELMLASGIIPLLEEML-----CNPHSHGSVTAIYLNLSCLEEAKPVIGSSL 549
Query: 505 EAIPALVDMVRDGTD-RSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEEL 563
A+P +V+++ T+ + K +AL ++F L + N L+A V L +L T SD +
Sbjct: 550 -AVPFMVNLLWTETEVQCKVDALHSLFHLSTYPPNIPCLLSADLVNALQSL-TISDEQRW 607
Query: 564 ITDSLAVLATLAEKLDGTIAILHHGAL-DMIMKILDSCTSRAGKEYCVSLLLALCINGGA 622
SLAVL L G ++ +L + ILD+ +E VSLLL LC + +
Sbjct: 608 TEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNE-QEQAVSLLLILCNH--S 664
Query: 623 NVVALLVKXXXXXXXXXXXXXXXXXRASKKASALIRILHEFYERHSSGSTTP 674
+ + +V R ++A L+ + E +R + T P
Sbjct: 665 EICSEMVLQEGVIPSLVSISVNGTQRGRERAQKLLTLFRELRQRDQTHLTEP 716
Score = 133 (51.9 bits), Expect = 6.6e-16, Sum P(3) = 6.6e-16
Identities = 59/233 (25%), Positives = 107/233 (45%)
Query: 54 NALKAIR-QVHNLLIFLEELRVESADIPGSLVISLSELHLTFQRIRYLLEDCTREGARLW 112
NAL I ++ ++ LE R S S + +L LH+ ++++ +L CT E ++L+
Sbjct: 24 NALSVIYCKIMSIFPSLEAARPRSK----SGIQALCSLHVVLEKVKNILRHCT-ESSKLY 78
Query: 113 MLMKSDRVSNQLRLFIRAIGTALDVLPLAAIDVSSEV-KELVDLVMRQARKAIFETDPDD 171
+ + D V L+ F +A + D L V + +L++++M + F DP +
Sbjct: 79 LAITGDSVV--LK-FEKAKSSLTDSLRRVEDIVQQSIGSQLLEILM-ELENTEFSLDPAE 134
Query: 172 KRVLNDVIRIL---GRFEDGIRPDKSEV-KRVLDYLGITKWSQCNQEVKFLDSEITIEYL 227
K + + +I +L G FE ++ EV + LGIT E + L I +
Sbjct: 135 KEIGDQIIGLLQQGGNFESSSDNNELEVFHQAATRLGITSSRAALTERRCLKKLIERARM 194
Query: 228 NVDKRSELALLSSLMGFL-SYCKCIMFDLVDNEASQQVSKKCCNNMLGGLTPD 279
DKR E ++++ L+ + Y K ++ D+ SQ S C+ + G D
Sbjct: 195 EDDKRKE-SIVAYLLHLMRKYSKLFRSEIWDDNDSQGSSSLPCSPTIQGSIDD 246
Score = 86 (35.3 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 50/246 (20%), Positives = 100/246 (40%)
Query: 371 LAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXX 430
+ G ++ L F+ L E + + A + L + N+ ++ G IP
Sbjct: 460 MGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLEEML 519
Query: 431 XXXXXXTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYI 490
AI LNLS ++K ++ S + F+V+++ +V+ + A +LF++
Sbjct: 520 CNPHSHGSVTAI--YLNLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHL 577
Query: 491 ASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPL 550
++ + + + + AL + R + +L + L+++ ++A + L
Sbjct: 578 STYPPNIPCL-LSADLVNALQSLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPS--L 634
Query: 551 LLNLLTSSDSEELITDSLAVLATLAEKLDGTIA---ILHHGALDMIMKILDSCTSRAGKE 607
+ NL T D+ E AV L I +L G + ++ I + T R G+E
Sbjct: 635 VSNLCTILDTGEPNEQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSISVNGTQR-GRE 693
Query: 608 YCVSLL 613
LL
Sbjct: 694 RAQKLL 699
Score = 47 (21.6 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 363 TRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRS 415
TR + S AA + L I +E +++ VAY + L+ K S RS
Sbjct: 168 TRLGITSSRAALTERRCLKKLIERARMEDDKRKESIVAYLLHLMRKYSKLFRS 220
Score = 42 (19.8 bits), Expect = 6.6e-16, Sum P(3) = 6.6e-16
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 389 LEGTSEEKNKVAYEVRLLTKSSIFN-RSC 416
++G+ ++ + A++ R L+K S FN RSC
Sbjct: 240 IQGSIDDAHGRAFD-RQLSKLSSFNFRSC 267
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 290 (107.1 bits), Expect = 8.0e-23, P = 8.0e-23
Identities = 86/289 (29%), Positives = 146/289 (50%)
Query: 386 DRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAAL 445
D L + K A ++RLL K+ NR + E G I TQE+A+ AL
Sbjct: 190 DGLRSSSVAIKRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLRCNDPWTQEHAVTAL 249
Query: 446 LNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPE 505
LNLS H ++K+++ G + +V ++K G + ++Q+AA L +A +EE + IG
Sbjct: 250 LNLSLHDQNKAVIAAGGAIKSLVWVLKTGTET-SKQNAACALLSLALLEENKGSIGACG- 307
Query: 506 AIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELIT 565
AIP LV ++ +G+ R KK+AL ++ L N R + AGAV L++L+ + + +
Sbjct: 308 AIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLV-AEEGTGMAE 366
Query: 566 DSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLLLALCINGGANVV 625
++ VL++LA DG AI+ G + +++ ++ + + GKE+ + LL LC + N
Sbjct: 367 KAMVVLSSLAAIDDGKEAIVEEGGIAALVEAIEDGSVK-GKEFAILTLLQLCSDSVRNRG 425
Query: 626 ALLVKXXXXXXXXXXXXXXXXXRASKKASALIRILHEFYERHSSGSTTP 674
L+ + RA +KA L+ L E R + S++P
Sbjct: 426 LLVREGAIPPLVGLSQSGSVSVRAKRKAERLLGYLRE--PRKEASSSSP 472
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 236 (88.1 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 69/218 (31%), Positives = 115/218 (52%)
Query: 403 VRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKSMVVESG 462
+R +T+SS R L + Q NA A+++NLS ++K +V SG
Sbjct: 258 LRKMTRSSEDLRVSLCTDRILSFLRSLLVSRYNLVQTNAAASVVNLSLEKQNKVKIVRSG 317
Query: 463 GLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDRSK 522
+ ++D++K G EA++H A LF +A +E + +IG P L + ++R++
Sbjct: 318 FVPLLIDVLKSGT-TEAQEHVAGALFSLALEDENKMVIGVLGAVEPLLHALRSSESERAR 376
Query: 523 KNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLAEKLDGTI 582
++A +A++ L + N R + AGAVP LL+++ S DS I L VL LA DG
Sbjct: 377 QDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDSTSRI---LLVLCNLAACPDGKG 433
Query: 583 AILHHGALDMIM-KILD--SCTSRAGKEYCVSLLLALC 617
A+L A+ +++ K+ + S A +E CV++LL LC
Sbjct: 434 AMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTLC 471
Score = 103 (41.3 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 277 TPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVL 336
TP +F CPI+ +M DPV +S+G T++R S+ G G R ++ NL +
Sbjct: 31 TPPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLSTVIPNLAM 90
Query: 337 KRIIQDW 343
K I W
Sbjct: 91 KSTIFSW 97
Score = 68 (29.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 39/183 (21%), Positives = 72/183 (39%)
Query: 370 SLAAEGAMKLLANFIS--DRLLEGT-SEEKNKVAYEVRL-LTKSSIF--NRSCLVEVGCI 423
SLA E K++ + + LL S E + + L L S+ NR+ LV G +
Sbjct: 343 SLALEDENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAV 402
Query: 424 PXXXXXXXXXXXXTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKK---GLKVEAR 480
P ++ + L NL+ K +++ + +V +++ G AR
Sbjct: 403 PTLLSMVRSGDSTSR--ILLVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAAR 460
Query: 481 QHAAATLFYIASIE-EYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNH 539
++ A L + +R L E A L+++ +G +R K+ A + + G
Sbjct: 461 ENCVAVLLTLCQGNLRFRGLASE-AGAEEVLMEVEENGNERVKEKASKILLAMRGGGGGE 519
Query: 540 WRF 542
F
Sbjct: 520 SEF 522
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 284 (105.0 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 99/359 (27%), Positives = 172/359 (47%)
Query: 273 LGGLTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLV 332
LG P F CPISL++M DPVT+STG TYDR SI W GN+TCP T L L+
Sbjct: 10 LGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIP 69
Query: 333 NLVLKRIIQDWSV---DNGVSIAEESGHKNRDIT-RTVLAGSLAAEGA-MKLLANFISDR 387
N L+R+IQ+W V NGV I+ R++L+ + A G + + + + R
Sbjct: 70 NHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRSRAAAIR 129
Query: 388 LLEGTSE--EKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAAL 445
L G + EKN+V L+ + R LV + ++ A+ L
Sbjct: 130 RLRGLARDSEKNRV-----LIAGHNA--REILVRI-LFADIETTSLSSELVSESLALLVL 181
Query: 446 LNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYI---ASIEEYRKLIGE 502
L++++ + +++ + + F+ ++ +E R +AAA + + A + + +I
Sbjct: 182 LHMTE-TECEAVASDPSRVGFMTRLLFDS-SIEIRVNAAALIEMVLTGAKSMDLKLIISG 239
Query: 503 NPEAIPALVDMVRD--GTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDS 560
+ ++D++++ + R+ K + AIF L + ++AGA +L++ L ++D
Sbjct: 240 SDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRL-AADF 298
Query: 561 EELITD-SLAVLATLAEKLDGTIAILHHG-ALDMIMKILDSCTSRAGKEYCVSLLLALC 617
+ T+ LA + L +G A H + +++K + + RA EY LLALC
Sbjct: 299 DRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRA-TEYAAGALLALC 356
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 281 (104.0 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 113/418 (27%), Positives = 194/418 (46%)
Query: 273 LGGLTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNST-CPKTGERLQSKELL 331
LG P F CPISLE+M+DPVT+ TG TYDRASI W GN+T CP T L L+
Sbjct: 10 LGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLI 69
Query: 332 VNLVLKRIIQDWSV---DNGVS-IAEESGHKNRDITRTVLAGSLAAEGA-MKLLANFISD 386
N L+R+IQ+W V NGV I + R +L+ + A G + + + +
Sbjct: 70 PNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAAL 129
Query: 387 RLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALL 446
R L G + + +K R+L + N + E+ I ++ A+ +L
Sbjct: 130 RRLRGFARDSDKN----RVLIAAH--NAT---EI-LIKILFSETTSSELVSESLALLVML 179
Query: 447 NLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGE--NP 504
+++ + S+ + G ++F+ ++ +E R +AAA + +++ + L G N
Sbjct: 180 PITEPNQFVSISSDPGRVEFLTRLLFDS-SIETRVNAAALIEIVSTGTKSADLKGSISNS 238
Query: 505 EAI-PALVDMVRD--GTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSE 561
E++ ++D++R+ + R+ K + +F L + AGA +L++ L ++D +
Sbjct: 239 ESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRL-AADFD 297
Query: 562 ELITD-SLAVLATLAEKLDGTIAILHHG-ALDMIMKILDSCTSRAGKEYCVSLLLALCIN 619
T+ +LA + L +G A H + +++K + + RA EY LLALC
Sbjct: 298 RCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRA-TEYAAGALLALCTA 356
Query: 620 --------GGANVVALLVKXXXXXXXXXXXXXXXXXRASKKASALIRILHEFYERHSS 669
GA VV L+ RA KKA L+++L + + ++S
Sbjct: 357 EERWREEAAGAGVVVQLL---------LMVQSECTERAKKKAQKLLKLLRDSWPDYNS 405
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 216 (81.1 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 63/221 (28%), Positives = 113/221 (51%)
Query: 402 EVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKSMVVES 461
++R T+S+ R L + Q NA A+++NLS +K +V S
Sbjct: 206 QLRKTTRSNETTRISLCTDRILSLLRSLIVSRYNIVQTNAAASIVNLSLEKPNKLKIVRS 265
Query: 462 GGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDRS 521
G + ++D++K G EA++H LF +A EE + +IG P L + ++R+
Sbjct: 266 GFVPLLIDVLKSG-STEAQEHVIGALFSLAVEEENKMVIGVLGAVEPLLHALRSSESERA 324
Query: 522 KKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLAEKLDGT 581
+++A +A++ L + N R + AGAVP++L+++ S +S I L +L LA +G
Sbjct: 325 RQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRSGESASRI---LLLLCNLAACSEGK 381
Query: 582 IAILHHGALDMIM-KILDSC---TSRAGKEYCVSLLLALCI 618
A+L A+ +++ K+ +S + A +E CV LL L +
Sbjct: 382 GAMLDGNAVSILVGKLRESGGAESDAAARENCVGALLTLSV 422
Score = 100 (40.3 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 275 GLTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQS--KELLV 332
G TP +F CPI+ +M DPV +++G T++R S+ + R S PK + Q ++
Sbjct: 8 GETPTEFLCPITGFLMSDPVVVASGQTFERISV-QVCR-NLSFAPKLHDGTQPDLSTVIP 65
Query: 333 NLVLKRIIQDW 343
NL +K I W
Sbjct: 66 NLAMKSTILSW 76
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 181 (68.8 bits), Expect = 6.7e-20, Sum P(2) = 6.7e-20
Identities = 44/107 (41%), Positives = 61/107 (57%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P F CPISLE M+DPVTL TG TY+R++ILKWF G+ TCP T + L + N L
Sbjct: 61 PSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTLH 120
Query: 338 RIIQDWSVDNGVSIAEESGHKNRDIT-RTV-LAGSLA-AEGAMKLLA 381
++I W V + + S D+ R + + G+L A+G K+ A
Sbjct: 121 QLIYTWFSQKYVLMKKRS----EDVQGRAIEILGTLRKAKGKAKVHA 163
Score = 133 (51.9 bits), Expect = 6.7e-20, Sum P(2) = 6.7e-20
Identities = 46/184 (25%), Positives = 93/184 (50%)
Query: 441 AIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLI 500
AIA L+NL SK+ +++ + +VDM+ G +E + + A + + + +R +
Sbjct: 206 AIAILVNLELDSDSKAGLMQPARVSLMVDMLNDG-SIETKINCARLIGRLVEEKGFRAEL 264
Query: 501 GENPEAIPALVDMVRDGTDRSKKN-ALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSD 559
+ + L+ +V+D R+ + AL + + +H + GAVP L+++L D
Sbjct: 265 VSSHSLLVGLMRLVKDRRRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLD 324
Query: 560 SEELITDSLAVLATLAEKLDGTIAI------LHHGALDMIMKILDSCTSRAGKEYCVSLL 613
E + +L VL +L + +G IA+ + H + ++MK+ + CT+ Y +S+L
Sbjct: 325 VE-CLESALFVLDSLCLESEGRIALKDSVNTIPH-TVRLLMKVSEKCTN-----YAISIL 377
Query: 614 LALC 617
++C
Sbjct: 378 WSVC 381
Score = 84 (34.6 bits), Expect = 8.4e-15, Sum P(2) = 8.4e-15
Identities = 33/175 (18%), Positives = 74/175 (42%)
Query: 451 HCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPAL 510
H +K VV+ GG+ F++ + A A + ++ K P + +
Sbjct: 174 HAIAKKTVVDEGGV-FVISSLLSPFTSHAVGSEAIAILVNLELDSDSKAGLMQPARVSLM 232
Query: 511 VDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPL-LLNLLTSSDSEELITDSLA 569
VDM+ DG+ +K N I L+ G +++ ++ + L+ L+ ++ +L
Sbjct: 233 VDMLNDGSIETKINCARLIGRLVEEKGFRAELVSSHSLLVGLMRLVKDRRRRNGVSPALT 292
Query: 570 VLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLLLALCINGGANV 624
+L +++ ++ GA+ ++ +L C E + +L +LC+ +
Sbjct: 293 LLKSVSVHKQVRNLLVRIGAVPQLVDVLP-CLDVECLESALFVLDSLCLESEGRI 346
Score = 49 (22.3 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 19/105 (18%), Positives = 50/105 (47%)
Query: 510 LVDMVRDGTDRSKKNALVAIFGLLM-HSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSL 568
++ +R ++K +AL + ++M H+ + G V ++ +LL+ S + ++++
Sbjct: 148 ILGTLRKAKGKAKVHALSELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAI 207
Query: 569 AVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLL 613
A+L L D ++ + +++ +L+ + K C L+
Sbjct: 208 AILVNLELDSDSKAGLMQPARVSLMVDMLNDGSIET-KINCARLI 251
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 204 (76.9 bits), Expect = 8.5e-20, Sum P(2) = 8.5e-20
Identities = 66/276 (23%), Positives = 126/276 (45%)
Query: 387 RLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALL 446
+L E + +R +T+ +R L I Q N A L+
Sbjct: 236 KLKSNRISEIEEALISIRRITRIDESSRISLCTTRVISALKSLIVSRYATVQVNVTAVLV 295
Query: 447 NLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEA 506
NLS +K +V SG + ++D++K G VEA++H+A +F +A +E + IG
Sbjct: 296 NLSLEKSNKVKIVRSGIVPPLIDVLKCG-SVEAQEHSAGVIFSLALEDENKTAIGVLGGL 354
Query: 507 IPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITD 566
P L+ ++R GT+ ++ ++ +A++ L + N + + GAV +LL +++ ++I
Sbjct: 355 EP-LLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSLG---QMIGR 410
Query: 567 SLAVLATLAEKLDGTIAILHHGALDMIMKIL--DSCTSRAGKEYCVSLLLALCINGGANV 624
L +L +A A+L G ++ ++ +L D + + +E CV++L L +GG
Sbjct: 411 VLLILCNMASCPVSRPALLDSGGVECMVGVLRRDREVNESTRESCVAVLYGLSHDGGLRF 470
Query: 625 VALLVKXXXXXXXXXXXXXXXXXRASKKASALIRIL 660
L + RA +KA ++ +L
Sbjct: 471 KGLAM-AANAVEELVKVERSGRERAKQKARRVLEVL 505
Score = 111 (44.1 bits), Expect = 8.5e-20, Sum P(2) = 8.5e-20
Identities = 28/85 (32%), Positives = 41/85 (48%)
Query: 261 SQQVSKKCCNNMLGGLT--PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTC 318
S+ S NN T P +F CPIS +M DP+ +S+GH+Y+RA ++ G +
Sbjct: 40 SRSSSSSSSNNNSPTKTEIPAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPT 99
Query: 319 PKTGERLQSKELLVNLVLKRIIQDW 343
P ++ NL LK I W
Sbjct: 100 PPP----DFSTVIPNLALKSAIHSW 120
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 260 (96.6 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 101/395 (25%), Positives = 172/395 (43%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P +F CPIS+++MKDPV +STG TYDR SI W +GN TCP T L + + + N ++
Sbjct: 32 PPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHTIR 91
Query: 338 RIIQDWSVDNGVSIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKN 397
++IQ W V+ G + + R L E + KL S G E+
Sbjct: 92 KMIQGWCVEKGSPLIQRI-----PTPRVPLMPCEVYEISRKL-----SSATRRGDYEKCG 141
Query: 398 KVAYEVRLLTKSSIFNRSCLVE--VGCI--PXXXXXXXXXXXXTQENAIAALLNLSKHCK 453
+ +++ L S NR C+ E VG + N I +LL
Sbjct: 142 VIIEKIKKLGDESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEILSLLTWMFPIG 201
Query: 454 SKSMVVESGGLDF-IVDMVKKGLKVEARQHAAATLFYIASIEEYR--KLIGENPEAIPAL 510
+ + + F V + K RQ+AA + I S++E R EN A AL
Sbjct: 202 LEGISKLASATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVENGVA-EAL 260
Query: 511 VDMVRDGTDRSK-KNALVAIFGLLMHSGN-HWRFLAAGAVPLLLNLLTSSDSEELITD-S 567
V ++RD S K++L+AI+ +++ FL G V + + ++ D+E + + +
Sbjct: 261 VKLIRDSVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIV--DAENSVCEKA 318
Query: 568 LAVLATLAEKLDGTIAILHHG-ALDMIMKILDSCTSRAGKEYCVSLLLALCINGGANVVA 626
LAVL + E G + + + +++K + + A + +S++L L G V
Sbjct: 319 LAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRS-SMSMILKLWKTGNTVAVE 377
Query: 627 LLVKXXXXXXXXXXXXXXXXXRASKKASALIRILH 661
V+ +KA+ L+++++
Sbjct: 378 DAVRLGAFQKVLLVLQVGYGEETKEKATELLKMMN 412
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 248 (92.4 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 102/355 (28%), Positives = 174/355 (49%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P F CPISL++M+ PV+L TG TYDRASI +W GN+TCP T + L++K+ + NL L+
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNLTLQ 72
Query: 338 RIIQDWSVDNGVSIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKN 397
R+I WS D SI H N D VL E K N + +RL+ + E
Sbjct: 73 RLINIWS-D---SIGRR--H-NGD--SPVLNPPSGREVPTKEEVNVLLERLM--SLENLM 121
Query: 398 KVAYEVRLLTKSSIFNRSCLVE-VGCIPXXXXXXXXXXXXTQE--NAIAAL--LNLSKHC 452
K+ VR + K S NR L + + +P + AI L + + +
Sbjct: 122 KI---VRFV-KDSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSIKVDRER 177
Query: 453 KSKSMVVESGG--LDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPAL 510
S M+ GG L I+ +++G +E++ + L +I+ + + +I E + +
Sbjct: 178 LSNLMLANDGGDCLTAILLAIQRG-NLESKIESVRVLDWISFDAKSKLMIAERDGVLTEM 236
Query: 511 VDMVR--DGTDRSKKNALVAIFGLLMHSGN-HWRFLAAGAVPLLLN-LLTSSDSEELITD 566
+ + + +D S A ++ + S + +AA A+ + + LLT + + +T+
Sbjct: 237 MKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVTE 296
Query: 567 -SLAVLATLAEKLDGTIAIL--HHG-ALDMIMKILDSCTSRAGKEYCVSLLLALC 617
SL +L TL+ K +G + I +G ++ ++K L ++ A E+ V++L LC
Sbjct: 297 KSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTA-TEHAVTILWCLC 350
>TAIR|locus:1005716696 [details] [associations]
symbol:AT1G08315 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 SMART:SM00185 EMBL:CP002684
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
UniGene:At.42266 UniGene:At.48169 EMBL:AK229288 IPI:IPI00546916
RefSeq:NP_849613.1 ProteinModelPortal:Q0WNZ8 SMR:Q0WNZ8
PRIDE:Q0WNZ8 EnsemblPlants:AT1G08315.1 GeneID:837352
KEGG:ath:AT1G08315 TAIR:At1g08315 eggNOG:NOG245502
InParanoid:Q0WNZ8 OMA:VAQVAGC PhylomeDB:Q0WNZ8
ProtClustDB:CLSN2690788 Genevestigator:Q0WNZ8 Uniprot:Q0WNZ8
Length = 325
Score = 236 (88.1 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 78/259 (30%), Positives = 125/259 (48%)
Query: 374 EGAMKLLANFISDRLLEGTSEEKNKVAY-EVRLLTKSSIFNRSCLVEVGCIPXXXXXXXX 432
E A + + I RL SE+ A E+RL++K +R + + G IP
Sbjct: 2 ETAKRRTMSTIVSRL-SSVSEQTRAAALAELRLISKQDPDSRLIIADAGAIPYLAETLYS 60
Query: 433 XXXXTQENAIAALLNLSKHCKSKSMVVESGGL-DFIVDMVKKG---LKVEARQHAAATLF 488
+QENA A LLNLS S+ ++ S GL D + ++ A Q +AAT++
Sbjct: 61 SSHSSQENAAATLLNLS--ITSREPLMSSRGLLDALSHALRHHDTTTSPAAVQSSAATIY 118
Query: 489 YIASIEE-YRKLIGENPEAIPALVDMVR--DGTDRSKKNALVAIFGLLMHSGNHWRFLAA 545
+ EE YR +IG + I +L+ ++R D RS K++L A+F + ++ N ++
Sbjct: 119 SLLIAEESYRPIIGSKRDIIFSLIHIIRYPDSHPRSIKDSLKALFAIALYPMNRSTMISL 178
Query: 546 GAVPLLLNLLTSSDSEELITDSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCT--SR 603
GA+P L +L+ ++ D+ AV+A +A D + +++ +LD CT S
Sbjct: 179 GAIPALFSLIVKDSRCGIVEDATAVMAQVAGCEDSEDGMRRVSGANVLADLLDPCTGSSL 238
Query: 604 AGKEYCVSLLLALCINGGA 622
KE V LL L GGA
Sbjct: 239 RIKENSVGALLNLARCGGA 257
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 246 (91.7 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 94/349 (26%), Positives = 158/349 (45%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P F CPISL++MK PV+LSTG TYDR SI +W GN+TCP T + LQ+KE + NL L
Sbjct: 12 PCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLH 71
Query: 338 RIIQDWS--VDNGV-SIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFI--SDRLLEGT 392
R+I WS ++ S + ES RD + A + F SD E
Sbjct: 72 RLIDHWSDSINRRADSESPESDTPTRDEINAAIERFRIENDARSKILRFARESDENREFL 131
Query: 393 SEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHC 452
+ + + VA V L++ S F+ S L+ VG I LS
Sbjct: 132 AGKDDFVAMLVDLISDSRNFSDSQLLLVG--------EAVKILSMIRRKIFDRRRLS--- 180
Query: 453 KSKSMVVESGG--LDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPAL 510
++++ +GG L ++K+G + + +A L +IA E + +I + + +
Sbjct: 181 ---NLILTNGGDCLTSFFLLIKRG-NPKLKIDCSAVLEFIAVDAESKLIIAKGEGLVTEI 236
Query: 511 VDMVRDGTDRSKKNALVAIFGLLMHSGN-HWRFLAAGAVPLLLNLLTSSDSEELITDS-L 568
+ ++ +D S A +++ + S + V L +LLT + +T+ L
Sbjct: 237 IKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSVTEKCL 296
Query: 569 AVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLLLALC 617
+L ++ +G I ++ ++ L S A E+ V++L ++C
Sbjct: 297 KLLEAISSCKEGRSEICDGVCVETVVNKLMK-VSTAATEHAVTVLWSVC 344
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 171 (65.3 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 33/66 (50%), Positives = 40/66 (60%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P F CPISLE M+DPVTL TG TY+R +I KWF G+ TCP T + L + N L
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTLH 124
Query: 338 RIIQDW 343
+I W
Sbjct: 125 HLIYTW 130
Score = 126 (49.4 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 49/223 (21%), Positives = 103/223 (46%)
Query: 402 EVRLLTKSSIFNRSCLVEVGCIPXXXXXXX-XXXXXTQENAIAALLNLSKHCKSKSMVVE 460
E++ + + + R +VE G + +A L++L SKS +++
Sbjct: 170 ELKQIVIAHLMARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDLDSDSKSGLMQ 229
Query: 461 SGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDR 520
+ IVDM+ G E + + A + + + +R + + + L+ +V+D R
Sbjct: 230 PAKVSLIVDMLNDGSN-ETKINCARLIRGLVEEKGFRAELVSSHSLLVGLMRLVKDKRHR 288
Query: 521 SKKN-ALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLAEKLD 579
+ + AL + + +H ++ GAVP L+++L S D E L +L VL L ++
Sbjct: 289 NGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLEL-ALFVLDALCTDVE 347
Query: 580 GTIAILHHG-----ALDMIMKILDSCTSRAGKEYCVSLLLALC 617
G +A+ + ++M++ ++CT+ Y +S+L ++C
Sbjct: 348 GRVAVKDSANTIPYTVRVLMRVSENCTN-----YALSILWSVC 385
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 196 (74.1 bits), Expect = 9.6e-18, Sum P(2) = 9.6e-18
Identities = 65/235 (27%), Positives = 121/235 (51%)
Query: 438 QENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYR 497
Q NA+A+L+NLS K+K +V G + ++D++K G + EA++HAA T+F + S+E+
Sbjct: 283 QTNALASLVNLSLDKKNKLTIVRLGFVPILIDVLKSGSR-EAQEHAAGTIFSL-SLEDDN 340
Query: 498 KL-IGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLT 556
K+ IG P L + +DR++ ++ +A++ L ++ N + + GAVP L +++
Sbjct: 341 KMPIGVLGALQPLLHALRAAESDRTRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVR 400
Query: 557 SSDSEELITDSLAVLATLAEKLDGTIAILHHGALDMIM-KILDSCT--------SRAGKE 607
S +S + +L V+ LA +G A+L A+ +++ K+ + T S + +E
Sbjct: 401 SGESA---SRALLVICNLACCSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARE 457
Query: 608 YCVSLLLALCINGGANVVALLVKXXXXXXXXXXXXXXXXXRASKKASALIRILHE 662
CV+ L AL + L K RA +KA +++++ E
Sbjct: 458 NCVAALFALS-HESLRFKGL-AKEARAVEVLKEVEERGTERAREKAKKILQLMRE 510
Score = 124 (48.7 bits), Expect = 7.8e-10, Sum P(2) = 7.8e-10
Identities = 57/207 (27%), Positives = 88/207 (42%)
Query: 360 RDITRT--VLAGSLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRL-LTKSSIFNRSC 416
R +TRT SL + + LL N I R + + N +A V L L K N+
Sbjct: 249 RKMTRTNDEARVSLCSPRILSLLKNMIVSRY---SLVQTNALASLVNLSLDKK---NKLT 302
Query: 417 LVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLK 476
+V +G +P QE+A + +LS +K + G L ++ ++
Sbjct: 303 IVRLGFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAAES 362
Query: 477 VEARQHAAATLFYIASIEEYR-KLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMH 535
R +A L+++ + R KL+ A+PAL MVR G S+ AL+ I L
Sbjct: 363 DRTRHDSALALYHLTLNQTNRSKLVRLG--AVPALFSMVRSGESASR--ALLVICNLACC 418
Query: 536 SGNHWRFLAAGAVPLLLNLLTSSDSEE 562
S L A AV +L+ L +EE
Sbjct: 419 SEGRSAMLDANAVAILVGKLREEWTEE 445
Score = 100 (40.3 bits), Expect = 9.6e-18, Sum P(2) = 9.6e-18
Identities = 27/77 (35%), Positives = 40/77 (51%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQS----KELLVN 333
P +F CPIS +M DPV +S+G T++R + + R N PK + +S ++ N
Sbjct: 34 PVEFLCPISKSVMSDPVVVSSGQTFERVCV-QVCRDLNFI-PKLNDDEESLPDFSNIIPN 91
Query: 334 LVLKRIIQDWSVDNGVS 350
L +K I W GVS
Sbjct: 92 LNMKSTIDTWCDTVGVS 108
Score = 72 (30.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 27/117 (23%), Positives = 51/117 (43%)
Query: 503 NPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEE 562
+P + L +M+ + NAL ++ L + N + G VP+L+++L S S E
Sbjct: 264 SPRILSLLKNMIVSRYSLVQTNALASLVNLSLDKKNKLTIVRLGFVPILIDVLKSG-SRE 322
Query: 563 LITDSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLLLALCIN 619
+ + +L+ + D + I GAL ++ L + S + L L +N
Sbjct: 323 AQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRAAESDRTRHDSALALYHLTLN 379
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 235 (87.8 bits), Expect = 8.2e-17, P = 8.2e-17
Identities = 92/354 (25%), Positives = 157/354 (44%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGN-STCPKTGERLQSKELLVNLVL 336
P F CPISLEIMKDPV +STG TYDR SI KW AG ++CP T + + +L N L
Sbjct: 13 PPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNHTL 72
Query: 337 KRIIQDWSVDNGVSIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEK 396
+R+IQ W N E I ++ + KL+ + S E +
Sbjct: 73 RRLIQSWCTLNASYGVERIPTPRPPICKSEIE---------KLIRDSASSH------ENQ 117
Query: 397 NKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKS 456
K +R + + N+ CL G +P AL NL H ++
Sbjct: 118 VKCLKRLRQIVSENATNKRCLEAAG-VPEFLANIVSNDSENGSLTDEAL-NLLYHLETSE 175
Query: 457 MVV--------ESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIP 508
V+ ++ + + ++++G+ E+R +A L I + + + + PE
Sbjct: 176 TVLKNLLNNKKDNNIVKSLTKIMQRGM-YESRVYATLLLKNILEVADPMQSMTLKPEVFT 234
Query: 509 ALVDMVRDG-TDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLT--SSDSEELIT 565
+V ++ D + ++ K A+ + + N + + AG + +++ LL S SE
Sbjct: 235 EVVQILDDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGP 294
Query: 566 D-SLAVLATLAEKLDGTIAILHHGALDMIM--KILDSCTSRAGKEYCVSLLLAL 616
+ ++ VL L + +G L+HGA ++ KIL S+ + V +LL++
Sbjct: 295 EMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILR--VSQTASDRAVRVLLSV 346
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 232 (86.7 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 98/347 (28%), Positives = 151/347 (43%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P F CPISL++MK PV+L TG TYDRASI +W GN+TCP T + LQ+K+ + N L+
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQ 70
Query: 338 RIIQDWSVDNGVSIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKN 397
R+I+ WS ES TR +A ++ +K+ DR +
Sbjct: 71 RLIEIWSDSVRRRTCVESAELAAP-TRDEIADAI---DRVKIEKEERDDREVLSKIVRFG 126
Query: 398 KVAYEVR-LLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLN--LSKHCKS 454
+ + + R L F + + + + + I + + +S +
Sbjct: 127 RESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRSKVSDRRRF 186
Query: 455 KSMVVESGG--LDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVD 512
++++ +G L IV + K G VE + A L +IA E + LI E I L+
Sbjct: 187 SNLILTNGRDRLSVIVYLFKTG-NVELKIDCAGLLEFIAVDAESKLLIAERDGLITELMK 245
Query: 513 MVRDGTD----RSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSL 568
+ +D S + L+AI N R G V LL+ TSS S + L
Sbjct: 246 SISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSLSVSVTEKCL 305
Query: 569 AVLATLAEKLDGTIAILH-HG-ALDMIMKILDSCTSRAGKEYCVSLL 613
+L LA +G I G L ++K L S A E+ V++L
Sbjct: 306 KLLEILASTKEGRSEICGGDGECLKTVVKKLMK-VSTAATEHAVTVL 351
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 233 (87.1 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 72/301 (23%), Positives = 145/301 (48%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P +F C +S IM +PV +++G TY++ I +W + TCPKT + L + + N ++
Sbjct: 73 PKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVLSHRLWIPNHLIS 131
Query: 338 RIIQDWSVDNGVSIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSE--E 395
+I W + N + S ++ + + L + ++ ++D++ E E
Sbjct: 132 DLITQWCLVNKYDHQKPSDELVAELFTSDIEALLQRVSS----SSSVADQI-EAAKELRH 186
Query: 396 KNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSK 455
+ K VR+ + I + + + QEN + AL NLS +K
Sbjct: 187 QTKKFPNVRVFFVAGIHDS--ITRLLSPLSTLDEAVDSSLELQENIVTALFNLSILESNK 244
Query: 456 SMVVESGGLDFIVDMVKKGLKV---EARQHAAATLFYIASIEEYRKLIGENPEAIPALVD 512
+++ E+ ++ ++ K LK E R++AAATL +++I+ + +IG N EA+ AL+D
Sbjct: 245 TVIAENC---LVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIG-NSEAVKALID 300
Query: 513 MVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLA 572
++ +G + K A +F L + N + ++AG + + + + + + LA+++
Sbjct: 301 LIEEGDLLATKEATSTVFNLCIVLENKGKVVSAGLIHAATKKIKAGSNVDELLSLLALIS 360
Query: 573 T 573
T
Sbjct: 361 T 361
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 189 (71.6 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 87/357 (24%), Positives = 141/357 (39%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P++ CPISL++M DPV +++G TY+R I KWF G++TCPKT ++L L N +K
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 338 RIIQDWSVDNGVSIAEESGH-KNRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSE-- 394
+I W NG I SG +++D+ LA S +E N I L+G
Sbjct: 333 GLIASWCEQNGTQIP--SGPPESQDLDYWRLALS-DSESTKSQSVNSIGSYKLKGVKIVP 389
Query: 395 -EKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCK 453
E+N R T+ S + E I +E + + + +
Sbjct: 390 LEENGTTVVERQNTEESFVSDDDDEEDSDINVLERYQDLLAVLNEEEGLEKKCKVVEKIR 449
Query: 454 -----SKSMVVESGGLDFIVDMVK-KGLKVE-----ARQHAAATLFYIASIEEYRKLIGE 502
+ + G F+ +++ G V+ A+ A LF +A K +
Sbjct: 450 LLLKDDEEARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELML 509
Query: 503 NPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEE 562
I L M+ AL L + + ++ AVP L+ LL +
Sbjct: 510 TSGVIRLLEKMISSAESHGSATALYLNLSCLDEAKSV--IGSSQAVPFLVQLLQKEIETQ 567
Query: 563 LITDSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLLLALCIN 619
D+L L L+ A+L I+K L + G+ + LA+ +N
Sbjct: 568 CKLDALHALYNLSTYSPNIPALLSSN----IIKSLQGLLASTGENLWIEKSLAVLLN 620
Score = 185 (70.2 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 76/299 (25%), Positives = 134/299 (44%)
Query: 390 EGTSEEKNKVAYEVRLLTKSS----IF-NRSCLVEVGCIPXXXXXXXXXXXXTQENAIAA 444
EG E+K KV ++RLL K IF + VE + Q++ A
Sbjct: 436 EGL-EKKCKVVEKIRLLLKDDEEARIFMGANGFVEA-LLRFLGSAVDDNNAAAQDSGAMA 493
Query: 445 LLNLS-KHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYI--ASIEEYRKLIG 501
L NL+ + ++K +++ SG ++ +++K + A H +AT Y+ + ++E + +IG
Sbjct: 494 LFNLAVNNNRNKELMLTSG----VIRLLEKMIS-SAESHGSATALYLNLSCLDEAKSVIG 548
Query: 502 ENPEAIPALVDMVRDGTD-RSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDS 560
+ +A+P LV +++ + + K +AL A++ L +S N L++ + L LL S+
Sbjct: 549 SS-QAVPFLVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGE 607
Query: 561 EELITDSLAVLATLAEKLDGTI-AILHHGALDMIMKILDSCTSRAGKEYCVSLLLALCIN 619
I SLAVL LA +G A+ G + + +LD + +E VS LL LC N
Sbjct: 608 NLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTE-QEQAVSCLLILC-N 665
Query: 620 GGANVVALLVKXXXXXXXXXXXXXXXXXRASKKASALIRILHEFYERHSSGSTTPVLPQ 678
G + + ++++ K L+ E +R S PQ
Sbjct: 666 GRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFREERQQRDQPSSNRDEPPQ 724
Score = 96 (38.9 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 46/192 (23%), Positives = 84/192 (43%)
Query: 86 SLSELHLTFQRIRYLLEDCTREGARLWMLMKSDRVSNQLRLFIRAIGTALDVLPLAAIDV 145
+L LH+ ++ + +L+ C+ E ++L++ + D V L F +A +D L V
Sbjct: 53 ALCSLHIALEKAKNILQHCS-ECSKLYLAITGDAV---LLKFEKAKIALIDGLKRVEDIV 108
Query: 146 SSEVKELVDLVMRQARKAIFETDPDDKRVLNDVIRIL--GRFEDGIRPDKSEVK---RVL 200
S + + ++ + F DP +K V + +I +L G+ D D +E++ R
Sbjct: 109 PSSIGSQILEIVGELENTRFMLDPSEKEVGDQIIALLQQGKKFDNCN-DNTELEIFHRAA 167
Query: 201 DYLGITKWSQCNQEVKFLDSEITIEYLNVDKRSELALLSSLMGFLSYC-KCIMFDLVDNE 259
L IT E + L I DKR E ++++ L+ + C K +++D
Sbjct: 168 TRLSITSSRVALAERRALKKLIDRARAEEDKRKE-SIVAYLLHLMRKCSKLFRSEILDEN 226
Query: 260 ASQQVSKKCCNN 271
S S C N
Sbjct: 227 DSPG-SYPCSPN 237
Score = 47 (21.6 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 359 NRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLV 418
+R TR + S A + L I E +++ VAY + L+ K S RS ++
Sbjct: 164 HRAATRLSITSSRVALAERRALKKLIDRARAEEDKRKESIVAYLLHLMRKCSKLFRSEIL 223
Query: 419 E 419
+
Sbjct: 224 D 224
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 219 (82.2 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 92/366 (25%), Positives = 161/366 (43%)
Query: 269 CNNMLGGLTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSK 328
C+ + P F CPIS E+MKDPV +++G TYDR +I KWF +G TCP T L S
Sbjct: 25 CSEEVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSL 84
Query: 329 ELLVNLVLKRIIQDWSVDNGVSIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFISDRL 388
E + N ++R+IQ W G S+ G + R + +E +L A + R
Sbjct: 85 EQIPNHTIRRMIQGWC---GSSLG--GGIERIPTPRVPVTSHQVSEICERLSA---ATR- 135
Query: 389 LEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVG-----CIPXXXXXXXXXXXXTQENAIA 443
G ++ ++ L K S NR C+ E G C+ E ++
Sbjct: 136 -RGDYAACMEMVTKMTRLGKESERNRKCVKENGAGLVLCVCFDAFSENANASLLLEETVS 194
Query: 444 ALL-NLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGE 502
L L + +S + + + +V++++ G + A + + K+ G
Sbjct: 195 VLTWMLPIGLEGQSKLTTTSSFNRLVELLRNGDQNAAFLIKELLELNVTHVHALTKINGV 254
Query: 503 NPEAIPALVDMVRDGTDRSKKNALVAIFGLLM-HSGNHWRFLAAGAVPLLLNLLTSSDSE 561
EA ++ RD T N+L++I +++ + RFL V + + +L DSE
Sbjct: 255 Q-EAFMKSIN--RDSTC---VNSLISIHHMILTNQETVSRFLELDLVNITVEMLV--DSE 306
Query: 562 ELITD-SLAVLATLAEKLDGTIAILHHGALDMIMKIL-DSCTSRAGKEYCVSLLLALCIN 619
+ + +L VL + E +G + + +++ IL + K+ VS++ +C +
Sbjct: 307 NSVCEKALTVLNVICETKEGREKVRRN---KLVIPILVKKILKISEKKDLVSVMWKVCKS 363
Query: 620 G-GANV 624
G G+ V
Sbjct: 364 GDGSEV 369
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 178 (67.7 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 36/71 (50%), Positives = 46/71 (64%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGN-STCPKTGERLQSKELLVNLVL 336
P F CPISL+IMKDPV +STG TYDR SI KW +G ++CP T + + +L N L
Sbjct: 8 PSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHTL 67
Query: 337 KRIIQDWSVDN 347
+R+IQ W N
Sbjct: 68 RRLIQSWCTLN 78
Score = 86 (35.3 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 40/188 (21%), Positives = 85/188 (45%)
Query: 439 ENAIAALLNL-SKHCKSKSMVVESGGLDFIVDMVK---KGLKVEARQHAAATLFYIASIE 494
+ A++ L +L + KS++ G + + + K +G+ E+R +AA L + +
Sbjct: 186 DEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGI-YESRAYAALLLKKLLEVA 244
Query: 495 EYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSG-NHWRFLAAGAVPLLLN 553
+ ++I E ++ ++ D + + I + G N + + G + +++
Sbjct: 245 DPMQIILLERELFGEVIQILHDQISHKATRSAMQILVITCPWGRNRHKAVEGGTISMIIE 304
Query: 554 LLTSS--DSEELITD-SLAVLATLAEKLDGTIAILHHGALDMIM--KILDSCTSRAGKEY 608
LL SE ++ ++ VL L + +G L+HGA ++ KIL S+ E
Sbjct: 305 LLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILR--VSQITSER 362
Query: 609 CVSLLLAL 616
V +LL++
Sbjct: 363 AVRVLLSV 370
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 171 (65.3 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 34/103 (33%), Positives = 59/103 (57%)
Query: 275 GLTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNL 334
G P+ F C +S +M DPV +S+G+T++R I KWF GN +CP + +L L N+
Sbjct: 217 GTLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNV 276
Query: 335 VLKRIIQDWSVDNGVSIAEESGHKNRDITRTV-LAGSLAAEGA 376
LK I +W NG+ + ++ K+ + ++ + S+A+ G+
Sbjct: 277 ELKSQISEWCAKNGLDV-QDPARKHVKASNSIDFSVSIASFGS 318
Score = 96 (38.9 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 52/236 (22%), Positives = 96/236 (40%)
Query: 358 KNRDITRTVLAGSLAAEGAMKLLANFISD--RLLEGTSEE---------KNKVAYEVRLL 406
KN + R AG + +G + LL F+S R +E EE +++V E L
Sbjct: 427 KNA-LERNGTAGEII-KGGLDLLLAFLSGNRRAIESLEEEVFKMFSVFLESEVVAEEALN 484
Query: 407 TKSSIFNR----SCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKSMVVESG 462
+ N S + G + QE A+ L NLS S + +E
Sbjct: 485 ILEVLSNHPHGPSKITSSGSLSSLLKIVESQAEHLQEQAMITLKNLSS---SMEICLEMV 541
Query: 463 GLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDRSK 522
LDFI + + +H+ L + S E+ R I E P+ + ++ +++ +
Sbjct: 542 SLDFIQKLTSFLQQKVFCKHSIIILKNLCSTEKGRGCITETPDCLASIAELLESNVPEEQ 601
Query: 523 KNALVAIFGLLMHSGNHWRFLAAGAVPLL--LNLLTSSDSEELITDSLAVLATLAE 576
+NA+ + L + + + A + L L++++ +EE+ + +L L E
Sbjct: 602 ENAISILLQLCVQKIEYCCLVVREATDIYSSLILISNNGTEEVKVSASELLRALVE 657
Score = 59 (25.8 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 15/63 (23%), Positives = 33/63 (52%)
Query: 547 AVPLLLNLLTSSDSEELITDSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGK 606
++ +L NL ++ IT++ LA++AE L+ + A+ +++++ C +
Sbjct: 562 SIIILKNLCSTEKGRGCITETPDCLASIAELLESNVPEEQENAISILLQL---CVQKI-- 616
Query: 607 EYC 609
EYC
Sbjct: 617 EYC 619
Score = 54 (24.1 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 559 DSEELITDSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSL 612
+SE + ++L +L L+ G I G+L ++KI++S ++ ++L
Sbjct: 474 ESEVVAEEALNILEVLSNHPHGPSKITSSGSLSSLLKIVESQAEHLQEQAMITL 527
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 200 (75.5 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 85/338 (25%), Positives = 152/338 (44%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P +F C +S IM DPV + +G TY++ I +W + TCP + L L N ++
Sbjct: 75 PKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLNH-DLTCPTAKQVLYRVCLTPNHLIN 133
Query: 338 RIIQDWSVDNGVSIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKN 397
+I W + N + K DI L +G LL S + ++
Sbjct: 134 ELITRWCLANKY---DRPAPKPSDIDYVT---ELFTDGIESLLQRISSP---SSSVADQT 184
Query: 398 KVAYEVRLLTKSSIFNRSCLV-EVG------CIPXXXXXXXXXXX-XTQENAIAALLNLS 449
+ A E+ L T+ + R + E+ P QEN + AL N+S
Sbjct: 185 EAAKELALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDSNPELQENIVTALFNMS 244
Query: 450 KHCKSKSMVVESGG-LDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIP 508
K+K+++ E+ + + +K+G V R++A TL ++ I+ + +IG N A+
Sbjct: 245 TFEKNKTVLAENHQVIPLLAKSMKQG-SVVTRRNATLTLASLSDIDSNKIIIG-NSVALK 302
Query: 509 ALVDMVRDGTDRSKKN-ALVAIFGLLMHSGNHWR-FLAAGAVPLLLNLLTSSDSEELITD 566
AL+D++ + D S + AL A+ L +W+ ++ G P + + + + + +
Sbjct: 303 ALIDLIGELDDLSATHDALCAVIDLCCDERENWKKAISLGLAPAAIKNIKARRN---LFE 359
Query: 567 SLAVLATLA--EKLDGTIAILHHGALDMIMKIL--DSC 600
SLA LA ++ E++ +A L G + ++ IL SC
Sbjct: 360 SLAALALISPHERVIQEVANL--GVIYDLLSILRKTSC 395
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 198 (74.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 71/342 (20%), Positives = 155/342 (45%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P +F C +S +IM +P+ +++G T++++ IL+W + TCP+T + L + ++ N ++
Sbjct: 66 PKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKH-ERTCPRTKQVLYHRFMIPNHLIN 124
Query: 338 RIIQDWSVDNGVSIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKN 397
+I++W + I K D + G L + LL S +E +E
Sbjct: 125 EVIKEWCL-----IHNFDRPKTSDEVIDLFTGDLES-----LLQRISSPSSVEDQTEAAK 174
Query: 398 KVAYEVRLLTKSSIFNRSCLVE-VGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKS 456
++A + + + ++ + + + + + EN + AL S K+K+
Sbjct: 175 ELALKAKRFSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIFSTSEKNKT 234
Query: 457 MVVESG-GLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVR 515
+V E+ L + +K+G V R H+AAT+ ++ + + +IG N E + AL+ ++
Sbjct: 235 LVAENPLVLPLLAKYMKQGT-VLTRIHSAATVNSLSYTDSNKIIIG-NSEVLKALIHVIE 292
Query: 516 DGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLA 575
+G + A A+ L + ++ G + + + + + ++ LA ++T
Sbjct: 293 EGDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNVSMLLSLLAFVST-- 350
Query: 576 EKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLLLALC 617
+ T + + G + + IL + S E V ++ +C
Sbjct: 351 QNHQTTEEMDNLGLIYDLFSILRNSNSLVNDENAVVIVYNIC 392
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 173 (66.0 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 68/282 (24%), Positives = 136/282 (48%)
Query: 342 DWSVDNGVSIAEESGHKNRDITRTVLAGSLAAEGAMKLLANFISDRLLEGTSEEKNKVAY 401
D G + E H ++ +V S ++ ++L+ S+ + + A
Sbjct: 32 DCDSPRGGDVDHELLHTAVSVSSSVSVSSSSSASIQRVLSLIRSE-----DCDSRLFAAK 86
Query: 402 EVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLS-KHCKSKSMVVE 460
E+R LTK+S R + P E A+ ALLNL+ K K+K ++E
Sbjct: 87 EIRRLTKTSHRCRRHFSQA-VEPLVSMLRFDSPESHHEAALLALLNLAVKDEKNKVSIIE 145
Query: 461 SGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDR 520
+G L+ I++ ++ +++A+A+L +++ + +IG N +P LV +++ G+ +
Sbjct: 146 AGALEPIINFLQSNSPT-LQEYASASLLTLSASANNKPIIGANG-VVPLLVKVIKHGSPQ 203
Query: 521 SKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITD---SL--AVLATLA 575
+K +A++A+ L N LA + +LNLL SS ++ SL A++ +
Sbjct: 204 AKADAVMALSNLSTLPDNLSMILATKPLSPILNLLKSSKKSSKTSEKCCSLIEALMVSGE 263
Query: 576 EKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLLLALC 617
E G ++ G + ++++L++ + +A +E+ V +LL LC
Sbjct: 264 EARTGLVS--DEGGVLAVVEVLENGSLQA-REHAVGVLLTLC 302
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 168 (64.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 279 DDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLKR 338
+DF CPIS+EIM+DP + G TY+ KW R+G T PKT + L++ L+ N L+
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRI 294
Query: 339 IIQDWSVDN 347
II+DW N
Sbjct: 295 IIKDWLEKN 303
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 151 (58.2 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 33/98 (33%), Positives = 56/98 (57%)
Query: 281 FTCPISLEIMKDPVTLSTGHTYDRASILKWFR----AGNS-TCPKTGERLQSKELLVNLV 335
F CP++ E+M DPVTL G T++R +I KWF+ +G +CP T + L S ++ ++
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASIA 86
Query: 336 LKRIIQDWSVDNGVS---IAEES---GHKNRDITRTVL 367
L+ I++W N + IA +S G+ DI + ++
Sbjct: 87 LRNTIEEWRSRNDAAKLDIARQSLFLGNAETDILQALM 124
Score = 68 (29.0 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 26/114 (22%), Positives = 50/114 (43%)
Query: 416 CLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHC----KSKSMVVESGGLDFIVDMV 471
CLVE G + E A+AAL +L + K ++ E+ G+ I++++
Sbjct: 667 CLVEGGAVEKLVALLDHENVKVVEAALAALSSLLEDGLDVEKGVKILDEADGIRHILNVL 726
Query: 472 KKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNA 525
++ + A + I IE+ + + E ALVD ++ R+++ A
Sbjct: 727 RENRTERLTRRAVWMVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIA 780
Score = 63 (27.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 42/196 (21%), Positives = 84/196 (42%)
Query: 438 QENAIAALLNLSKHCKS----KSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASI 493
+ + + AL+++ + C++ + V S + I+DM+K R A TL +
Sbjct: 116 ETDILQALMHVRQICRTIRSNRHGVRNSQLIHMIIDMLKS-TSHRVRYKALQTLQVVVEG 174
Query: 494 EEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAA-GAVPLLL 552
++ K I + + LV + + ++ A+ +F L + + GA+ LL+
Sbjct: 175 DDESKAIVAEGDTVRTLVKFLSHEPSKGREAAVSLLFELSKSEALCEKIGSIHGALILLV 234
Query: 553 NLLTSSDSEE--LITDSLAVLATLAEKLDGTIAILHHGALDMIM-KILDSCTSRAGKEYC 609
L TSS+SE ++ + L + + + +G L ++ K+L+ S K
Sbjct: 235 GL-TSSNSENVSIVEKADRTLENMERSEEIVRQMASYGRLQPLLGKLLEG--SPETKLSM 291
Query: 610 VSLLLALCINGGANVV 625
S L L +N V+
Sbjct: 292 ASFLGELPLNNDVKVL 307
Score = 50 (22.7 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 39/190 (20%), Positives = 78/190 (41%)
Query: 370 SLAAEG-AMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXX 428
++ AEG ++ L F+S +G E + +E L+KS C ++G I
Sbjct: 180 AIVAEGDTVRTLVKFLSHEPSKGR-EAAVSLLFE---LSKSEAL---C-EKIGSIHGALI 231
Query: 429 XXXXXXXXTQEN------AIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQH 482
EN A L N+ + + + G L ++ + +G E +
Sbjct: 232 LLVGLTSSNSENVSIVEKADRTLENMERSEEIVRQMASYGRLQPLLGKLLEG-SPETKLS 290
Query: 483 AAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRF 542
A+ L + + + L+ + + +LVD++R G ++ AL A+ + G+
Sbjct: 291 MASFLGELPLNNDVKVLVAQTVGS--SLVDLMRSGDMPQREAALKALNKISSFEGSAKVL 348
Query: 543 LAAGAVPLLL 552
++ G +P L+
Sbjct: 349 ISKGILPPLI 358
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 135 (52.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 31/96 (32%), Positives = 52/96 (54%)
Query: 281 FTCPISLEIMKDPVTLSTGHTYDRASILKWFRA----GNS-TCPKTGERLQSKELLVNLV 335
F CP++ ++M +PVTL G T++R +I KWF+ G +CP T + L +L ++
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPSIA 88
Query: 336 LKRIIQDWSVDNG---VSIAEESGHKNRDITRTVLA 368
L+ I++W N + IA +S + T +LA
Sbjct: 89 LRNTIEEWRARNDALKLDIARQSLYLGNAETNILLA 124
Score = 80 (33.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 46/196 (23%), Positives = 80/196 (40%)
Query: 438 QENAIAALLNLSKHCKS----KSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASI 493
+ N + AL N+ + C++ + V + I DM+K E R A TL +
Sbjct: 118 ETNILLALKNVREICRNIRKIRQRVCNPQLVRLITDMLKSSSH-EVRCKALQTLQVVVEG 176
Query: 494 EEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAA-GAVPLLL 552
+E K I + + +V + + ++ A+ +F L + + GA+ LL+
Sbjct: 177 DEESKAIVAEGDTVRTIVKFLSQEPSKGREAAVSVLFELSKSEALCEKIGSIHGAIILLV 236
Query: 553 NLLTSSDSEELITDSLA--VLATLAEKLDGTIAILHHGALD-MIMKILDSCTSRAGKEYC 609
L TSS SE + T A L L + + +G L ++ K+L+ S K
Sbjct: 237 GL-TSSKSENVSTVEKADKTLTNLERSEENVRQMAINGRLQPLLAKLLEG--SPETKVSM 293
Query: 610 VSLLLALCINGGANVV 625
L L +N V+
Sbjct: 294 AFYLGVLALNNDVKVI 309
Score = 60 (26.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 28/124 (22%), Positives = 51/124 (41%)
Query: 410 SIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKH----CKSKSMVVESGGLD 465
S+ CLVE + A+AAL L + + ++ E+ G+
Sbjct: 671 SVRESFCLVEGQAVDKLVDLLDHENDKVVGPALAALSTLLEDGLDVVQGVRLIDEADGIT 730
Query: 466 FIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNA 525
I++++ + R A + I IEE + +GE ALVD ++ R+++ A
Sbjct: 731 PILNVLLENRTENLRIRAVWMVERILRIEEIAREVGEEQNVTAALVDAFQNADFRTRQIA 790
Query: 526 LVAI 529
A+
Sbjct: 791 EKAL 794
Score = 43 (20.2 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 490 IASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLL---MHSGNHWRFL--A 544
I S+ E L+ +A+ LVD++ D+ AL A+ LL + R + A
Sbjct: 669 ICSVRESFCLV--EGQAVDKLVDLLDHENDKVVGPALAALSTLLEDGLDVVQGVRLIDEA 726
Query: 545 AGAVPLLLNLLTSSDSEEL 563
G P+L N+L + +E L
Sbjct: 727 DGITPIL-NVLLENRTENL 744
Score = 40 (19.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 34/145 (23%), Positives = 62/145 (42%)
Query: 455 KSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALV-DM 513
K +V ++ G ++D+++ + R+ A L I+S E KL+ N +P L+ D+
Sbjct: 307 KVIVAQTVGSS-LIDLMRTR-DMSQREAALGALNNISSFEGSAKLL-INTGILPPLIKDL 363
Query: 514 VRDGTDRSK---KNALVAIFGLLMHSG----------NHWRFLAAGAVPLLLNLLTSSDS 560
G ++ K I +++ G +H ++ V LL L TS+
Sbjct: 364 FYVGPNQLPIRLKEVSATILANIVNIGYDFDKVPVGPHHQTLVSEEIVENLLQL-TSNTG 422
Query: 561 EELITDSLAVLATLAEKLDGTIAIL 585
E+ LAVL L + I ++
Sbjct: 423 PEIQGKLLAVLVGLTSCPNSVINVV 447
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 29/66 (43%), Positives = 40/66 (60%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P F CPISLE+MKDP + G TY+ +I W + G+ T P T +L +L+ NL L+
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLALR 385
Query: 338 RIIQDW 343
IQ+W
Sbjct: 386 SAIQEW 391
>TAIR|locus:2135788 [details] [associations]
symbol:AT4G12710 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049640 EMBL:AL161534 HOGENOM:HOG000237435
EMBL:BT026433 EMBL:AK228965 IPI:IPI00547137 PIR:T06629
RefSeq:NP_193007.1 UniGene:At.33450 ProteinModelPortal:Q9SU15
SMR:Q9SU15 EnsemblPlants:AT4G12710.1 GeneID:826883
KEGG:ath:AT4G12710 TAIR:At4g12710 eggNOG:NOG281035
InParanoid:Q9SU15 OMA:MVHRSME PhylomeDB:Q9SU15
ProtClustDB:CLSN2685767 Genevestigator:Q9SU15 Uniprot:Q9SU15
Length = 402
Score = 155 (59.6 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 70/293 (23%), Positives = 127/293 (43%)
Query: 378 KLLANFISDRLLEGTSEEKNKVAYEVR-LLTKSSIFN--RSCLVEVGCIPXXXXXXXXXX 434
+LL +S +LL G + + + A E+R LL KS + + RS L + G IP
Sbjct: 44 ELLILHLSKKLLHGDLDFRIEAAKEIRKLLRKSPVKSSARSKLADAGVIPPLVPMLFSSN 103
Query: 435 XXTQENAIAALLNLS-KHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASI 493
+ ++ ALLNL+ ++ ++K +V++G + ++ ++K R+ A A + +++
Sbjct: 104 VDARHASLLALLNLAVRNERNKIEIVKAGAVPPLIQILKLH-NASLRELATAAILTLSAA 162
Query: 494 EEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLN 553
+ +I + P L+ M+ GT + K +A+ A+ L L A AV L++
Sbjct: 163 PANKAMIISSGVP-PLLIQMLSSGTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIH 221
Query: 554 LLTSSDSEELITDSLAVLAT--LAEKLDGTIAIL--HHGALDMIMKILDSCTSRAGKEYC 609
LL + L L+ DG AI G L ++ + D S E+
Sbjct: 222 LLKECKKHSKFAEKATALVEMILSHSEDGRNAITSCEDGILTLVETVEDG--SPLSIEHA 279
Query: 610 VSLLLALCINGGANVVALLVKXXXXXXXXXXXXXXXXXRASKKASALIRILHE 662
V LL+LC + L++K ++ +A L+ +L E
Sbjct: 280 VGALLSLCRSDRDKYRKLILKEGAIPGLLSSTVDGTS-KSRDRARVLLDLLRE 331
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 156 (60.0 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 32/68 (47%), Positives = 40/68 (58%)
Query: 277 TPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVL 336
TPD+F CPI+ EIMKDPV + G++Y+R +I W N T P T LQ+ L N L
Sbjct: 417 TPDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTPNRTL 476
Query: 337 KRIIQDWS 344
K I WS
Sbjct: 477 KMAIFRWS 484
>TAIR|locus:2087565 [details] [associations]
symbol:AT3G20170 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR000357 InterPro:IPR016024 Pfam:PF02985 PROSITE:PS50176
SMART:SM00185 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
InterPro:IPR021133 PROSITE:PS50077 EMBL:AP000383 EMBL:BT030397
IPI:IPI00525028 RefSeq:NP_188652.1 UniGene:At.50207
ProteinModelPortal:Q9LJY1 SMR:Q9LJY1 PaxDb:Q9LJY1 PRIDE:Q9LJY1
ProMEX:Q9LJY1 EnsemblPlants:AT3G20170.1 GeneID:821561
KEGG:ath:AT3G20170 TAIR:At3g20170 eggNOG:NOG301725
HOGENOM:HOG000153032 InParanoid:Q9LJY1 OMA:KCLWSLV PhylomeDB:Q9LJY1
ProtClustDB:CLSN2684731 Genevestigator:Q9LJY1 Uniprot:Q9LJY1
Length = 475
Score = 151 (58.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 51/171 (29%), Positives = 88/171 (51%)
Query: 453 KSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVD 512
+S+ ++V SGGL F+V+ K G + +R+ A + I R+++ E IPALVD
Sbjct: 184 ESRRVLVHSGGLKFLVEAAKVG-NLASRERACHAIGLIGVTRRARRILVE-AGVIPALVD 241
Query: 513 MVRDGTDRSKKNALVAIFGLLMHSGNHWRFLA-AGAVPLLLNLLTSSD--SEELITDSLA 569
+ RDG D++K A A+ G++ + R + AG++PL + LL+ D +++ D
Sbjct: 242 LYRDGDDKAKLLAGNAL-GIISAQTEYIRPVTEAGSIPLYVELLSGQDPMGKDIAEDVFC 300
Query: 570 VLAT-------LAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLL 613
+LA +AE+L + IL G + + D AG + VS++
Sbjct: 301 ILAVAEGNAVLIAEQL---VRILRAGDNEAKLAASDVLWDLAGYRHSVSVI 348
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 147 (56.8 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P F CPI+ +IM+DP + G TY+ +I +WF G+ T P +RL L+ NL L+
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALR 413
Query: 338 RIIQDW 343
IQ+W
Sbjct: 414 SAIQEW 419
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 145 (56.1 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P F CPIS +IM++P + G+TY+ +W G P T RL+++ L+ NLVL+
Sbjct: 295 PQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIPNLVLR 354
Query: 338 RIIQDW 343
I+DW
Sbjct: 355 SAIKDW 360
>CGD|CAL0001835 [details] [associations]
symbol:VAC8 species:5476 "Candida albicans" [GO:0000011
"vacuole inheritance" evidence=ISS;IMP] [GO:0030448 "hyphal growth"
evidence=IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0071563
"Myo2p-Vac17p-Vac8p transport complex" evidence=IEA] [GO:0071561
"nucleus-vacuole junction" evidence=IEA] [GO:0043495 "protein
anchor" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071562 "nucleus-vacuole junction assembly" evidence=IEA]
[GO:0071255 "CVT vesicle assembly" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0016236
"macroautophagy" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185
CGD:CAL0001835 GO:GO:0005774 GO:GO:0071216 GO:GO:0036180
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011
GO:GO:0000324 GO:GO:0030448 eggNOG:NOG265712 KO:K08332
EMBL:AACQ01000222 EMBL:AACQ01000221 RefSeq:XP_710979.1
RefSeq:XP_710992.1 ProteinModelPortal:Q59MN0 STRING:Q59MN0
GeneID:3647410 GeneID:3647417 KEGG:cal:CaO19.745
KEGG:cal:CaO19.8364 PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 56/233 (24%), Positives = 101/233 (43%)
Query: 397 NKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKS 456
N V L T+ N+S + + G + Q NA ALLN++ +++
Sbjct: 147 NAVGCITNLATQDD--NKSKIAKSGALIPLTKLAKSKDIRVQRNATGALLNMTHSGENRQ 204
Query: 457 MVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRK-LIGENPEAIPALVDMVR 515
+V +G + +V ++ + + + L IA E RK L P+ + LV ++
Sbjct: 205 ELVNAGAVPVLVSLLSNE-DADVQYYCTTALSNIAVDEVNRKKLASTEPKLVGQLVHLMD 263
Query: 516 DGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLA 575
+ R + A +A+ L SG + AG +P L+ LLT + + L+ ++A + ++
Sbjct: 264 SPSPRVQCQATLALRNLASDSGYQVEIVRAGGLPHLVQLLTCNH-QPLVLAAVACIRNIS 322
Query: 576 EKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLLLALCINGGANVVALL 628
I+ G L ++ +LD S + + VS L L + N ALL
Sbjct: 323 IHPLNEALIIEAGFLKPLVGLLDYTDSEEIQCHAVSTLRNLAASSEKNRTALL 375
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/125 (28%), Positives = 71/125 (56%)
Query: 438 QENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYR 497
Q A AL NL+ + ++K ++VE GGL+ ++ + +E + +A + +A+ ++ +
Sbjct: 104 QRAACGALGNLAVNTENKILIVEMGGLEPLIRQMMS-TNIEVQCNAVGCITNLATQDDNK 162
Query: 498 KLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSG-NHWRFLAAGAVPLLLNLLT 556
I ++ IP L + + R ++NA A+ + HSG N + AGAVP+L++LL+
Sbjct: 163 SKIAKSGALIP-LTKLAKSKDIRVQRNATGALLNMT-HSGENRQELVNAGAVPVLVSLLS 220
Query: 557 SSDSE 561
+ D++
Sbjct: 221 NEDAD 225
>UNIPROTKB|Q59MN0 [details] [associations]
symbol:VAC8 "Vacuolar protein 8" species:237561 "Candida
albicans SC5314" [GO:0000011 "vacuole inheritance"
evidence=ISS;IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185 CGD:CAL0001835
GO:GO:0005774 GO:GO:0071216 GO:GO:0036180 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011 GO:GO:0000324
GO:GO:0030448 eggNOG:NOG265712 KO:K08332 EMBL:AACQ01000222
EMBL:AACQ01000221 RefSeq:XP_710979.1 RefSeq:XP_710992.1
ProteinModelPortal:Q59MN0 STRING:Q59MN0 GeneID:3647410
GeneID:3647417 KEGG:cal:CaO19.745 KEGG:cal:CaO19.8364
PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 56/233 (24%), Positives = 101/233 (43%)
Query: 397 NKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKS 456
N V L T+ N+S + + G + Q NA ALLN++ +++
Sbjct: 147 NAVGCITNLATQDD--NKSKIAKSGALIPLTKLAKSKDIRVQRNATGALLNMTHSGENRQ 204
Query: 457 MVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRK-LIGENPEAIPALVDMVR 515
+V +G + +V ++ + + + L IA E RK L P+ + LV ++
Sbjct: 205 ELVNAGAVPVLVSLLSNE-DADVQYYCTTALSNIAVDEVNRKKLASTEPKLVGQLVHLMD 263
Query: 516 DGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLA 575
+ R + A +A+ L SG + AG +P L+ LLT + + L+ ++A + ++
Sbjct: 264 SPSPRVQCQATLALRNLASDSGYQVEIVRAGGLPHLVQLLTCNH-QPLVLAAVACIRNIS 322
Query: 576 EKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLLLALCINGGANVVALL 628
I+ G L ++ +LD S + + VS L L + N ALL
Sbjct: 323 IHPLNEALIIEAGFLKPLVGLLDYTDSEEIQCHAVSTLRNLAASSEKNRTALL 375
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/125 (28%), Positives = 71/125 (56%)
Query: 438 QENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYR 497
Q A AL NL+ + ++K ++VE GGL+ ++ + +E + +A + +A+ ++ +
Sbjct: 104 QRAACGALGNLAVNTENKILIVEMGGLEPLIRQMMS-TNIEVQCNAVGCITNLATQDDNK 162
Query: 498 KLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSG-NHWRFLAAGAVPLLLNLLT 556
I ++ IP L + + R ++NA A+ + HSG N + AGAVP+L++LL+
Sbjct: 163 SKIAKSGALIP-LTKLAKSKDIRVQRNATGALLNMT-HSGENRQELVNAGAVPVLVSLLS 220
Query: 557 SSDSE 561
+ D++
Sbjct: 221 NEDAD 225
>TAIR|locus:2038598 [details] [associations]
symbol:AT2G27430 "AT2G27430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY169003 EMBL:AY954802 IPI:IPI00540469
RefSeq:NP_180312.2 UniGene:At.38764 ProteinModelPortal:Q8GUS7
SMR:Q8GUS7 PRIDE:Q8GUS7 EnsemblPlants:AT2G27430.1 GeneID:817288
KEGG:ath:AT2G27430 TAIR:At2g27430 eggNOG:NOG235856
HOGENOM:HOG000241608 InParanoid:Q8GUS7 OMA:KNMEMIT PhylomeDB:Q8GUS7
ProtClustDB:CLSN2690947 Genevestigator:Q8GUS7 Uniprot:Q8GUS7
Length = 438
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 59/234 (25%), Positives = 106/234 (45%)
Query: 391 GTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSK 450
G+ EEK K A E+ L + R + E+G I Q+ A+ AL+ LS
Sbjct: 89 GSWEEKEKAAIEIEKLAREDKKTRKLMAELGVIQILVSMVASDVSGHQKAAVNALIQLSH 148
Query: 451 HC-KSKSMVVESGGLDFIVDMVKKGLKV--EARQHAAATLFYIASIEEYRKLIGENPEAI 507
+K+++V + I + K ++V ++ +HA A L S +L + + +
Sbjct: 149 GTYTNKALMVNAD----ICSKLPKNVEVLDQSTRHAFAELLLSLSSLTNTQLPVASSQIL 204
Query: 508 PALVD-MVRDGTD-RSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELIT 565
P L+D M D TD ++K+ L I L + N + GAV LL+L+++ D E
Sbjct: 205 PFLMDTMNSDSTDMKTKEICLATISNLCLVLENAGPLVLNGAVETLLSLMSTKDLSEKAL 264
Query: 566 DSLA--VLATLAEKLDGTIAILHHGALDMIM-KILDSCTSRAGKEYCVSLLLAL 616
SL V+ + +K ++ G ++++ + + C +EY +L+ L
Sbjct: 265 ASLGKLVVTQMGKKAMEDCLLVSKGLIEILTWEDIPKC-----QEYAAYILMVL 313
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 142 (55.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 29/74 (39%), Positives = 41/74 (55%)
Query: 270 NNMLGGLTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKE 329
+++ G+ PD+F CPI+ E+MKDPV S G++Y+R ++ W T P T L S
Sbjct: 396 DSLSSGI-PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLV 454
Query: 330 LLVNLVLKRIIQDW 343
L N LK I W
Sbjct: 455 LTPNRTLKMAINRW 468
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 28/66 (42%), Positives = 36/66 (54%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
PD+F CPI+ E+MKDPV S G++Y+R ++ W T P T L S L N LK
Sbjct: 405 PDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTPNRTLK 464
Query: 338 RIIQDW 343
I W
Sbjct: 465 MAINRW 470
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 144 (55.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 32/87 (36%), Positives = 47/87 (54%)
Query: 259 EASQQVSKKCCNNMLGGLT--PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNS 316
E ++V++K N+ G T P F CP+ ++M +P + G+TYDR +I +W + N
Sbjct: 746 ENLKKVAEKARNSFSGVSTQPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHN- 804
Query: 317 TCPKTGERLQSKELLVNLVLKRIIQDW 343
T P T L SK LL N L I +W
Sbjct: 805 TSPMTDSPLHSKNLLPNYTLYTAIMEW 831
>SGD|S000000739 [details] [associations]
symbol:VAC8 "Phosphorylated and palmitoylated vacuolar
membrane protein" species:4932 "Saccharomyces cerevisiae"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0043495 "protein anchor" evidence=IMP;IPI] [GO:0071562
"nucleus-vacuole junction assembly" evidence=IMP] [GO:0071561
"nucleus-vacuole junction" evidence=IDA;IPI] [GO:0000011 "vacuole
inheritance" evidence=IEA;IMP] [GO:0071255 "CVT vesicle assembly"
evidence=IMP] [GO:0016236 "macroautophagy" evidence=IMP]
[GO:0034727 "piecemeal microautophagy of nucleus" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0071563 "Myo2p-Vac17p-Vac8p transport complex"
evidence=IDA;IPI] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SGD:S000000739 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:COG5064 GO:GO:0000329 EMBL:BK006939 GO:GO:0043495
GO:GO:0000011 GO:GO:0016236 GeneTree:ENSGT00680000099702
EMBL:U18530 GO:GO:0042144 RefSeq:NP_010907.3 GeneID:856709
KEGG:sce:YEL009C KO:K09464 RefSeq:NP_010903.3 GeneID:856702
KEGG:sce:YEL013W KO:K08332 PANTHER:PTHR23315:SF8
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 GO:GO:0071255
EMBL:AF005267 PIR:S50446 ProteinModelPortal:P39968 SMR:P39968
DIP:DIP-5121N IntAct:P39968 MINT:MINT-517641 STRING:P39968
PaxDb:P39968 PeptideAtlas:P39968 EnsemblFungi:YEL013W
NextBio:982766 Genevestigator:P39968 GermOnline:YEL013W
GO:GO:0071563 GO:GO:0071561 GO:GO:0071562 Uniprot:P39968
Length = 578
Score = 140 (54.3 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 46/168 (27%), Positives = 90/168 (53%)
Query: 438 QENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYR 497
Q A AAL NL+ + ++K ++VE GGL+ +++ + G VE + +A + +A+ ++ +
Sbjct: 102 QVAACAALGNLAVNNENKLLIVEMGGLEPLINQMM-GDNVEVQCNAVGCITNLATRDDNK 160
Query: 498 KLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTS 557
I + IP L + + R ++NA A+ + N + AGAVP+L++LL+S
Sbjct: 161 HKIATSGALIP-LTKLAKSKHIRVQRNATGALLNMTHSEENRKELVNAGAVPVLVSLLSS 219
Query: 558 SDSEE--LITDSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSR 603
+D + T +L+ +A + E +A + ++ ++DS +SR
Sbjct: 220 TDPDVQYYCTTALSNIA-VDEANRKKLAQTEPRLVSKLVSLMDSPSSR 266
>TAIR|locus:2145653 [details] [associations]
symbol:AT5G14510 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR016024
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AL163817 IPI:IPI00537670
PIR:T48624 RefSeq:NP_196955.1 UniGene:At.31922
ProteinModelPortal:Q9LY78 SMR:Q9LY78 PRIDE:Q9LY78
EnsemblPlants:AT5G14510.1 GeneID:831302 KEGG:ath:AT5G14510
TAIR:At5g14510 eggNOG:NOG303012 HOGENOM:HOG000237435
InParanoid:Q9LY78 OMA:CKEHAVG PhylomeDB:Q9LY78
ProtClustDB:CLSN2687225 Genevestigator:Q9LY78 Uniprot:Q9LY78
Length = 327
Score = 134 (52.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 60/246 (24%), Positives = 116/246 (47%)
Query: 380 LANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQE 439
+ + + LL G E + + A E LT S R L E I T E
Sbjct: 1 MEEIVVESLLSGNRESQIEAAIE---LTNLSRKQRQKLAEREIISPLLSMLQSQDCITTE 57
Query: 440 NAIAALLNLSKHC-KSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRK 498
A++ALL+L+ ++K +V+SG + ++++++ K+ + A A L ++S + K
Sbjct: 58 VALSALLSLAFGSERNKVRIVKSGAVPTLLEILQSETKMVVLELAMAFLLILSSCNK-NK 116
Query: 499 LIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMH-SGNHW---RFLAAGAVPLLLNL 554
+ + + LV ++ G DR A V L + S H +A+GA LL +
Sbjct: 117 VKMASTRLVQLLVGLI--GLDRLTIQAKVDGIATLQNLSTLHQIVPLVIASGAPYALLQV 174
Query: 555 LTSSD-SEELITDSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSLL 613
+ D S EL ++A+L + +++ + GA+ ++++ ++ +++ KE+ V +L
Sbjct: 175 INFCDKSSELADKAVALLENIISHSPESVSSIG-GAIGVLVEAIEEGSAQC-KEHAVGIL 232
Query: 614 LALCIN 619
L +C N
Sbjct: 233 LGICNN 238
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/66 (40%), Positives = 36/66 (54%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
PD+F CPI+ E+MKDPV S G++Y++ ++ W T P T L S L N LK
Sbjct: 405 PDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTPNRTLK 464
Query: 338 RIIQDW 343
I W
Sbjct: 465 MAINRW 470
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 138 (53.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P + CPI E+MKDP+ + G TY+ +I +W G+ T P T +++ L+ N L
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 338 RIIQDW 343
IQDW
Sbjct: 796 LAIQDW 801
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
PD+F CPI+ E+MKDP+ S G++Y++ ++ W T P T L S L N LK
Sbjct: 404 PDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRTLK 463
Query: 338 RIIQDW 343
I W
Sbjct: 464 MAIDRW 469
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 134 (52.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
PD+F CPI+ E+MKDP+ S G++Y++ ++ W T P T L S L N LK
Sbjct: 405 PDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTPNRTLK 464
Query: 338 RIIQDW 343
I W
Sbjct: 465 MAIDRW 470
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 135 (52.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 25/66 (37%), Positives = 37/66 (56%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P F CPIS E+M++P + G TY+ S+ +W G+ T P T +L L+ N L+
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 338 RIIQDW 343
IQ+W
Sbjct: 558 SAIQEW 563
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 136 (52.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 27/66 (40%), Positives = 36/66 (54%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
PD+F CPI+ E+MKDPV S G++Y++ ++ W T P T L S L N LK
Sbjct: 405 PDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLILPSMVLTPNRTLK 464
Query: 338 RIIQDW 343
I W
Sbjct: 465 MAISRW 470
Score = 41 (19.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 18/88 (20%), Positives = 41/88 (46%)
Query: 93 TFQRIRYLLEDCTREGARLWMLMK--SDRVS----NQL---RLFIRAIGTALDVLPLAAI 143
T +++ +ED + + +W+ + +D V N + LF + +D L + ++
Sbjct: 321 TDDQVKQFIEDWSEDDVSMWLCAQGLNDLVDIFKINNIDGRELFNLTKESLVDDLKIESL 380
Query: 144 DVSSEVKELVDLVMRQARKAIFETDPDD 171
+ S+V ++ +R KA+ PD+
Sbjct: 381 GLRSKVLRKIE-ELRTKVKALSSGIPDE 407
>POMBASE|SPBC354.14c [details] [associations]
symbol:vac8 "vacuolar protein Vac8 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000011 "vacuole
inheritance" evidence=ISO] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0000324 "fungal-type vacuole" evidence=ISO]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016236
"macroautophagy" evidence=ISO] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] [GO:0043495 "protein anchor" evidence=ISO]
[GO:0071255 "CVT vesicle assembly" evidence=ISO] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 PomBase:SPBC354.14c GO:GO:0005794 GO:GO:0043234
GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CU329671 GenomeReviews:CU329671_GR eggNOG:COG5064
GO:GO:0000329 GO:GO:0043495 GO:GO:0000011 HSSP:Q02248 GO:GO:0016236
GO:GO:0042144 KO:K08332 PANTHER:PTHR23315:SF8 PIR:T40294
RefSeq:NP_595238.1 ProteinModelPortal:O43028 STRING:O43028
EnsemblFungi:SPBC354.14c.1 GeneID:2541010 KEGG:spo:SPBC354.14c
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 NextBio:20802124
GO:GO:0071255 Uniprot:O43028
Length = 550
Score = 133 (51.9 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 34/124 (27%), Positives = 69/124 (55%)
Query: 438 QENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYR 497
Q A AL NL+ + ++K++VV+ GLD ++ + VE + +A + +A+++E +
Sbjct: 102 QRAASVALGNLAVNAENKALVVKLNGLDLLIRQMMSP-HVEVQCNAVGCITNLATLDENK 160
Query: 498 KLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTS 557
I + A+ L + + R ++NA A+ + N + ++AG +P+L++LL S
Sbjct: 161 SKIAHSG-ALGPLTRLAKSKDIRVQRNATGALLNMTHSYENRQQLVSAGTIPVLVSLLPS 219
Query: 558 SDSE 561
SD++
Sbjct: 220 SDTD 223
Score = 123 (48.4 bits), Expect = 0.00037, P = 0.00037
Identities = 47/218 (21%), Positives = 97/218 (44%)
Query: 413 NRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVK 472
N+S + G + Q NA ALLN++ +++ +V +G + +V ++
Sbjct: 159 NKSKIAHSGALGPLTRLAKSKDIRVQRNATGALLNMTHSYENRQQLVSAGTIPVLVSLLP 218
Query: 473 KGLKVEARQHAAATLFYIASIEEYRKLIGEN-PEAIPALVDMVRDGTDRSKKNALVAIFG 531
+ + + ++ IA +RK + ++ P+ + +L+ ++ + + + A +A+
Sbjct: 219 SS-DTDVQYYCTTSISNIAVDAVHRKRLAQSEPKLVRSLIQLMDTSSPKVQCQAALALRN 277
Query: 532 LLMHSGNHWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLAEKLDGTIAILHHGALD 591
L + + A+P LL LL SS LI S+A + ++ I+ G L
Sbjct: 278 LASDERYQIEIVQSNALPSLLRLLRSSYLP-LILASVACIRNISIHPLNESPIIDAGFLR 336
Query: 592 MIMKILDSCTSRAGKE-YCVSLLLALCINGGANVVALL 628
++ +L SCT + + VS L L + N A++
Sbjct: 337 PLVDLL-SCTENEEIQCHAVSTLRNLAASSERNKRAII 373
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 132 (51.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 29/66 (43%), Positives = 36/66 (54%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P F CPIS+EIMKDP S G TY+ +I WF G S P T L + L+ N VL+
Sbjct: 436 PAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLVPNRVLR 495
Query: 338 RIIQDW 343
I +
Sbjct: 496 SFIHGY 501
>ASPGD|ASPL0000008980 [details] [associations]
symbol:AN12408 species:162425 "Emericella nidulans"
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000011 "vacuole inheritance"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000329
EMBL:BN001301 GO:GO:0000011 GO:GO:0016236 GO:GO:0042144
PANTHER:PTHR23315:SF8 HOGENOM:HOG000177331 OMA:EEIQCHA
GO:GO:0071255 GO:GO:0071563 GO:GO:0071561 GO:GO:0071562
ProteinModelPortal:C8V2Y6 EnsemblFungi:CADANIAT00007711
Uniprot:C8V2Y6
Length = 579
Score = 129 (50.5 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 44/177 (24%), Positives = 88/177 (49%)
Query: 438 QENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYR 497
Q A AAL NL+ + +K ++V GGL ++ + VE + +A + +A+ E+ +
Sbjct: 123 QRAASAALGNLAVNADNKVLIVALGGLAPLIKQMMSP-NVEVQCNAVGCITNLATHEDNK 181
Query: 498 KLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTS 557
I + A+ L+ + + R ++NA A+ + N + + AGA+P+L+ LL+S
Sbjct: 182 AKIARSG-ALGPLIRLAKSKDMRVQRNATGALLNMTHSDDNRQQLVNAGAIPVLVQLLSS 240
Query: 558 SDSEE--LITDSLAVLATLAEKLDGTIAILHHGALDMIMKILDSCTSRAGKEYCVSL 612
SD + T +L+ +A A +A + ++ ++DS T + + ++L
Sbjct: 241 SDVDVQYYCTTALSNIAVDASNRK-RLAQTESRLVQSLVHLMDSSTPKVQCQAALAL 296
>TAIR|locus:2056529 [details] [associations]
symbol:AT2G05810 "AT2G05810" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 SMART:SM00185
EMBL:CP002685 GenomeReviews:CT485783_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC006555 EMBL:AY099770
EMBL:BT015173 IPI:IPI00537341 PIR:F84471 RefSeq:NP_178638.1
RefSeq:NP_849939.1 UniGene:At.13408 UniGene:At.75216
ProteinModelPortal:Q8S8G1 SMR:Q8S8G1 EnsemblPlants:AT2G05810.1
EnsemblPlants:AT2G05810.2 GeneID:815132 KEGG:ath:AT2G05810
TAIR:At2g05810 eggNOG:NOG247895 HOGENOM:HOG000243018
InParanoid:Q8S8G1 OMA:WSQNPLL PhylomeDB:Q8S8G1
ProtClustDB:CLSN2683236 ArrayExpress:Q8S8G1 Genevestigator:Q8S8G1
Uniprot:Q8S8G1
Length = 580
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 41/176 (23%), Positives = 80/176 (45%)
Query: 403 VRLLTKSSIFNRSCLVEVGCIPXXXXXXXXXXXXTQENAIAALLNLSKHCKSKSMVVESG 462
V LLT SS +R + E G + + A A+ ++ + + G
Sbjct: 226 VSLLTSSSADSRKTVFEQGGLGPLLRLLETGSSPFKTRAAIAIEAITADPATAWAISAYG 285
Query: 463 GLDFIVDMVKKGLKVEARQHAAATLFYIASIEEYRKLIGENPEAIPALVDMVRDGTDRSK 522
G+ +++ + G K + ++H A + IA++EE R + E AIP L+ ++ G+ S
Sbjct: 286 GVTVLIEACRSGSK-QVQEHIAGAISNIAAVEEIRTTLAEEG-AIPVLIQLLISGSS-SV 342
Query: 523 KNALVAIFGLLMHSGNHWRFLAA---GAVPLLLNLLTSSDSEELITDSLAVLATLA 575
+ L+ SG ++R L G + +L++L+ S + + I L L+ ++
Sbjct: 343 QEKTANFISLISSSGEYYRDLIVRERGGLQILIHLVQESSNPDTIEHCLLALSQIS 398
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 129 (50.5 bits), Expect = 0.00015, P = 0.00015
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 276 LTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLV 335
+ P F CPI E+M+DP + G TY+ +I W + + T P T +L L+ N
Sbjct: 762 IAPPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHA 821
Query: 336 LKRIIQDW 343
L+ IQ+W
Sbjct: 822 LRSAIQEW 829
>TAIR|locus:2040214 [details] [associations]
symbol:AT2G25130 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
PROSITE:PS50176 SMART:SM00185 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY144104 EMBL:AY649296 IPI:IPI00540631
PIR:F84644 RefSeq:NP_180085.1 UniGene:At.39061
ProteinModelPortal:Q8H1N2 SMR:Q8H1N2 PaxDb:Q8H1N2 PRIDE:Q8H1N2
EnsemblPlants:AT2G25130.1 GeneID:817051 KEGG:ath:AT2G25130
TAIR:At2g25130 eggNOG:NOG238592 HOGENOM:HOG000243144
InParanoid:Q8H1N2 OMA:GRERGHD PhylomeDB:Q8H1N2
ProtClustDB:CLSN2683147 Genevestigator:Q8H1N2 Uniprot:Q8H1N2
Length = 468
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 65/263 (24%), Positives = 122/263 (46%)
Query: 374 EGAMKLLANFISDRLLEG-----TSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXX 428
E +++L + D E +E+K A EVRLL K I R L +G IP
Sbjct: 99 EETLEILKRVVKDLQAEAEAEAEAAEKKIAAASEVRLLAKDDIEARVTLAMLGAIPPLVS 158
Query: 429 XXXXXXXXTQENAIA---ALLNLS-KHCKSKSMVVESGGLDFIVDMVKKGLKV-EARQHA 483
+++ IA ALLNL + +K+ +V++G + ++ +V+ +A A
Sbjct: 159 MIDDESQ-SEDALIASLYALLNLGIGNDVNKAAIVKAGVVHKMLKLVESSKPPNQAIAEA 217
Query: 484 AATLFY-IASIEEYRKLIGENPEAIPALVDMVRD----GTDRSKKNALVAIFGLLMHSGN 538
F +++++ + +IG + AI LV +++ + +++++AL A++ L ++ N
Sbjct: 218 IVANFLGLSALDSNKPIIGSSG-AIIFLVKTLKNFEETSSSQAREDALRALYNLSIYHQN 276
Query: 539 HWRFLAAGAVPLLLNLLTSSDSEELITDSLAVLATLAEKLDGTIAILHH-GALDMIMKIL 597
L +P LLN L + E I LA+L + +G AI A +++ +L
Sbjct: 277 VSFILETDLIPFLLNTLGDMEVSERI---LAILTNVVSVPEGRKAIGEVVEAFPILVDVL 333
Query: 598 DSCTSRAGKEYCVSLLLALCING 620
+ S +E V +L+ + G
Sbjct: 334 NWNDSIKCQEKAVYILMLMAHKG 356
>TAIR|locus:2116792 [details] [associations]
symbol:AT4G31890 "AT4G31890" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161579 EMBL:AL049607 HOGENOM:HOG000243144
ProtClustDB:CLSN2683147 EMBL:BT033029 EMBL:AK228494 IPI:IPI00537660
PIR:T06311 RefSeq:NP_001190883.1 RefSeq:NP_194917.1
UniGene:At.44088 ProteinModelPortal:Q9SZ56 SMR:Q9SZ56 PRIDE:Q9SZ56
EnsemblPlants:AT4G31890.1 EnsemblPlants:AT4G31890.2 GeneID:829319
KEGG:ath:AT4G31890 TAIR:At4g31890 eggNOG:NOG319234
InParanoid:Q9SZ56 OMA:ASRILEC PhylomeDB:Q9SZ56 ArrayExpress:Q9SZ56
Genevestigator:Q9SZ56 Uniprot:Q9SZ56
Length = 518
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 55/238 (23%), Positives = 106/238 (44%)
Query: 391 GTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIP-XXXXXXXXXXXXTQENAIAALLNLS 449
G +K A EVRLL K R L +G IP Q ++ ALLNL
Sbjct: 155 GDCRKKITAASEVRLLAKEDSEARVTLAMLGAIPPLVSMIDDSRIVDAQIASLYALLNLG 214
Query: 450 -KHCKSKSMVVESGGLDFIVDMVKKGLKV--EARQHAAATLFYIASIEEYRKLIGENPEA 506
+ +K+ +V++G + ++ +++ E + A +++++ + +IG +
Sbjct: 215 IGNDANKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAI 274
Query: 507 I---PALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVPLLLNLLTSSDSEEL 563
I L ++ + +++++AL A++ L ++ N L + LLN L + E
Sbjct: 275 IFLVKTLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTLGDMEVSER 334
Query: 564 ITDSLAVLATLAEKLDGTIAI-LHHGALDMIMKILDSCTSRAGKEYCVSLLLALCING 620
I LA+L+ L +G AI L A +++ +L+ S +E +L+ + G
Sbjct: 335 I---LAILSNLVAVPEGRKAIGLVCDAFPVLVDVLNWTDSPGCQEKATYILMLMAHKG 389
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 126 (49.4 bits), Expect = 0.00029, P = 0.00029
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
P + CPI EIM+DP + G TY+R +I +W + P T RL+ +L N L+
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLR 768
Query: 338 RIIQDW 343
I++W
Sbjct: 769 SAIREW 774
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 130 (50.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 278 PDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTCPKTGERLQSKELLVNLVLK 337
PD+F CPI+ E+MKDPV + G++Y++ ++ W + P T L S L N LK
Sbjct: 405 PDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLPSLVLTPNRTLK 464
Query: 338 RIIQDW 343
I W
Sbjct: 465 MAISRW 470
Score = 37 (18.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 9/44 (20%), Positives = 21/44 (47%)
Query: 99 YLLEDCTREGA-RLWMLMKSDRVSNQLRLFIRAIGTALDVLPLA 141
+ + C ++ ++W ++ +D + +LR G + VL A
Sbjct: 203 FQMASCGQDNKIKVWFILFADFLGGELRYKCTLSGHSAPVLTCA 246
>TAIR|locus:2103351 [details] [associations]
symbol:ARABIDILLO-2 "AT3G60350" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048527 "lateral root development" evidence=IGI;IMP]
InterPro:IPR000225 InterPro:IPR001810 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181 SMART:SM00185
SMART:SM00256 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0048527
HSSP:Q02248 eggNOG:NOG48141 HOGENOM:HOG000029512
ProtClustDB:CLSN2685043 EMBL:AL138646 IPI:IPI00537320 PIR:T47846
RefSeq:NP_191594.1 UniGene:At.48788 UniGene:At.63623
ProteinModelPortal:Q9M224 SMR:Q9M224 PRIDE:Q9M224
EnsemblPlants:AT3G60350.1 GeneID:825206 KEGG:ath:AT3G60350
TAIR:At3g60350 InParanoid:Q9M224 OMA:RTTIDHI PhylomeDB:Q9M224
Genevestigator:Q9M224 Uniprot:Q9M224
Length = 928
Score = 125 (49.1 bits), Expect = 0.00045, P = 0.00045
Identities = 49/211 (23%), Positives = 85/211 (40%)
Query: 371 LAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXX 430
+A G + L + EG E+ + + S+ N + E G +
Sbjct: 551 VARAGGVHALVMLARNCKYEGAQEQAARALANLAAHGDSNGNNAAVGQEAGALEALVQLT 610
Query: 431 XXXXXXTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEAR-QHAAATLFY 489
++ A AL NL+ K++ + GG++ +V + K Q A +
Sbjct: 611 QSPHEGVKQEAAGALWNLAFDDKNRESIAAFGGVEALVALAKSSSNASTGLQERVAGALW 670
Query: 490 IASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAVP 549
S+ E + + IP L+ +VR + + A A++ L + GN R + G V
Sbjct: 671 GLSVSEANSIAIGHEGGIPPLIALVRSEAEDVHETAAGALWNLSFNPGNALRIVEEGGVV 730
Query: 550 LLLNLLTSSDSEELITDSLAVLATLAEKLDG 580
L+ L +SS S+ + +A LA LA DG
Sbjct: 731 ALVQLCSSSVSK--MARFMAALA-LAYMFDG 758
>RGD|1310892 [details] [associations]
symbol:Spag6 "sperm associated antigen 6" species:10116 "Rattus
norvegicus" [GO:0007283 "spermatogenesis" evidence=ISO] [GO:0015630
"microtubule cytoskeleton" evidence=ISO] [GO:0030317 "sperm
motility" evidence=ISO] InterPro:IPR000225 InterPro:IPR000357
InterPro:IPR016024 Pfam:PF00514 Pfam:PF02985 SMART:SM00185
RGD:1310892 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:COG5064 CTD:9576 HOVERGEN:HBG055326 HOGENOM:HOG000257051
OrthoDB:EOG4XKV6R EMBL:BC104678 IPI:IPI00363583
RefSeq:NP_001030132.1 UniGene:Rn.95004 ProteinModelPortal:Q3MHU1
GeneID:360747 KEGG:rno:360747 InParanoid:Q3MHU1 NextBio:673975
Genevestigator:Q3MHU1 Uniprot:Q3MHU1
Length = 507
Score = 121 (47.7 bits), Expect = 0.00054, P = 0.00054
Identities = 51/215 (23%), Positives = 93/215 (43%)
Query: 367 LAGSLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXX 426
LA ++ GA+ LA I L ++ K +V + + K S+ +VE P
Sbjct: 201 LAQTVVDAGAIAHLAQMI----LNPDAKLKRQVLSALSQIAKHSVDLAEMVVEAEIFPVV 256
Query: 427 XXXXXXXXXXTQENAIAALLNLSKHCKSKS-MVVESGGLDFIVDMVKKGLKVEARQHAAA 485
++NA + ++KH S ++V +GG+ ++D + K R
Sbjct: 257 LTCLKDKDEYVKKNACTLIREIAKHTPELSQLIVNAGGVAAVIDCIGSS-KGNIRLPGIM 315
Query: 486 TLFYIASIEEYRKLIGENPEAIPAL-VDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLA 544
L Y+A+ E + + +P L + + + D K A A+ L H+ H R +A
Sbjct: 316 MLGYVAAHSENLAMAVIISKGVPQLSICLSEEPEDHIKAAAAWALGQLGRHTPEHARAVA 375
Query: 545 A-GAVPLLLNLLTSSDS-EELITDSLAVLATLAEK 577
+P+LL+L S++S E+L S + + +K
Sbjct: 376 VTNTLPVLLSLYMSAESSEDLQLKSKKAIKNILQK 410
>UNIPROTKB|O75602 [details] [associations]
symbol:SPAG6 "Sperm-associated antigen 6" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005929 "cilium" evidence=IEA]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0005930 "axoneme"
evidence=TAS] [GO:0007286 "spermatid development" evidence=TAS]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 GO:GO:0005737 GO:GO:0019861 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0015630 GO:GO:0007286
GO:GO:0005929 eggNOG:COG5064 EMBL:CH471072 GO:GO:0030317
GO:GO:0030030 GO:GO:0005874 EMBL:AL158211 GO:GO:0005930
EMBL:AL513128 EMBL:AF079363 EMBL:AL080136 EMBL:CR533552
EMBL:AK289903 EMBL:AK302194 EMBL:BC030585 IPI:IPI00220580
IPI:IPI00335443 IPI:IPI00479375 IPI:IPI00479710 PIR:T12521
RefSeq:NP_001240783.1 RefSeq:NP_001240784.1 RefSeq:NP_036575.1
RefSeq:NP_758442.1 UniGene:Hs.655170 ProteinModelPortal:O75602
SMR:O75602 STRING:O75602 PhosphoSite:O75602 PaxDb:O75602
PRIDE:O75602 DNASU:9576 Ensembl:ENST00000313311
Ensembl:ENST00000376601 Ensembl:ENST00000376603
Ensembl:ENST00000376624 Ensembl:ENST00000435326
Ensembl:ENST00000456231 Ensembl:ENST00000538630 GeneID:9576
KEGG:hsa:9576 UCSC:uc001iri.3 UCSC:uc001irj.3 CTD:9576
GeneCards:GC10P022634 HGNC:HGNC:11215 HPA:HPA038440 MIM:605730
neXtProt:NX_O75602 PharmGKB:PA36051 HOVERGEN:HBG055326 OMA:QVFEQYQ
PhylomeDB:O75602 ChiTaRS:SPAG6 GenomeRNAi:9576 NextBio:35911
ArrayExpress:O75602 Bgee:O75602 CleanEx:HS_SPAG6
Genevestigator:O75602 GermOnline:ENSG00000077327 Uniprot:O75602
Length = 509
Score = 121 (47.7 bits), Expect = 0.00055, P = 0.00055
Identities = 51/215 (23%), Positives = 95/215 (44%)
Query: 367 LAGSLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXX 426
LA ++ GA+ LA I L ++ K+++ + ++K S+ +VE P
Sbjct: 201 LAQTVVDAGAVAHLAQMI----LNPDAKLKHQILSALSQVSKHSVDLAEMVVEAEIFPVV 256
Query: 427 XXXXXXXXXXTQENAIAALLNLSKHCKSKS-MVVESGGLDFIVDMVKKGLKVEARQHAAA 485
++NA + ++KH S +VV +GG+ ++D + K R
Sbjct: 257 LTCLKDKDEYVKKNASTLIREIAKHTPELSQLVVNAGGVAAVIDCIGS-CKGNTRLPGIM 315
Query: 486 TLFYIASIEEYRKLIGENPEAIPAL-VDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLA 544
L Y+A+ E + + +P L V + + D K A A+ + H+ H R +A
Sbjct: 316 MLGYVAAHSENLAMAVIISKGVPQLSVCLSEEPEDHIKAAAAWALGQIGRHTPEHARAVA 375
Query: 545 A-GAVPLLLNLLTSSDS-EELITDSLAVLATLAEK 577
+P+LL+L S++S E+L S + + +K
Sbjct: 376 VTNTLPVLLSLYMSTESSEDLQVKSKKAIKNILQK 410
>TAIR|locus:2079716 [details] [associations]
symbol:CHIP "carboxyl terminus of HSC70-interacting
protein" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009266
"response to temperature stimulus" evidence=IEP;IMP] [GO:0009651
"response to salt stress" evidence=IEP] [GO:0009737 "response to
abscisic acid stimulus" evidence=IMP] [GO:0051087 "chaperone
binding" evidence=IPI] [GO:0007165 "signal transduction"
evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009414 "response to water deprivation" evidence=RCA]
[GO:0009610 "response to symbiotic fungus" evidence=RCA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] [GO:0009733 "response
to auxin stimulus" evidence=RCA] [GO:0009738 "abscisic acid
mediated signaling pathway" evidence=RCA] [GO:0009753 "response to
jasmonic acid stimulus" evidence=RCA] [GO:0042538 "hyperosmotic
salinity response" evidence=RCA] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00504 UniPathway:UPA00143 GO:GO:0009737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009651 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR013105 Pfam:PF07719 GO:GO:0009266 GO:GO:0000151
EMBL:AC009853 EMBL:AY042807 EMBL:AY064647 IPI:IPI00547964
RefSeq:NP_566305.1 UniGene:At.18421 HSSP:Q9WUD1
ProteinModelPortal:Q9SRS9 SMR:Q9SRS9 STRING:Q9SRS9
EnsemblPlants:AT3G07370.1 GeneID:819925 KEGG:ath:AT3G07370
TAIR:At3g07370 eggNOG:NOG260504 HOGENOM:HOG000163725
InParanoid:Q9SRS9 KO:K09561 OMA:LEWEEES PhylomeDB:Q9SRS9
ProtClustDB:CLSN2688144 Genevestigator:Q9SRS9 Uniprot:Q9SRS9
Length = 278
Score = 119 (46.9 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 259 EASQQVSKKCCNNMLGGLTPDDFTCPISLEIMKDPVTLSTGHTYDRASILKWFRAGNSTC 318
+A ++V KK PD C I+LEI +DPV +G TY+RA+IL+ +
Sbjct: 182 KALERVFKKAAEEDKPTEVPDYLCCNITLEIFRDPVISPSGVTYERAAILEHLKKVGKFD 241
Query: 319 PKTGERLQSKELLVNLVLKRII 340
P T E++ L+ NL +K +
Sbjct: 242 PITREKIDPANLVPNLAIKEAV 263
Score = 38 (18.4 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 40 ICTYKSEFFSTNKRNALKAIRQVHN 64
+C K + ++ + + KAI+ VHN
Sbjct: 52 LCHMKRKDWTKVEEDCRKAIQLVHN 76
>TAIR|locus:2043709 [details] [associations]
symbol:AT2G45720 "AT2G45720" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002685 GenomeReviews:CT485783_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC003680 EMBL:AC004665
EMBL:BT015356 EMBL:BT015888 IPI:IPI00524023 PIR:T00885
RefSeq:NP_001031543.1 RefSeq:NP_182096.1 UniGene:At.28663
UniGene:At.36601 ProteinModelPortal:O64651 SMR:O64651 PaxDb:O64651
EnsemblPlants:AT2G45720.1 EnsemblPlants:AT2G45720.2 GeneID:819180
KEGG:ath:AT2G45720 TAIR:At2g45720 eggNOG:NOG268795
HOGENOM:HOG000239669 InParanoid:O64651 OMA:RSIVGHG PhylomeDB:O64651
ProtClustDB:CLSN2683369 ArrayExpress:O64651 Genevestigator:O64651
Uniprot:O64651
Length = 553
Score = 121 (47.7 bits), Expect = 0.00062, P = 0.00062
Identities = 57/228 (25%), Positives = 102/228 (44%)
Query: 370 SLAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXX 429
+LA EG +K++ N ++ +L G+ E + L + + RS + E G
Sbjct: 309 NLAEEGIVKVMINILNCGILLGSKEYAAECLQN--LTSSNETLRRSVISENGI---QTLL 363
Query: 430 XXXXXXXTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKKGLKVEARQHAAATLFY 489
QE+ +AA+ NL S S+ + +V ++K G + A+Q AA+T+
Sbjct: 364 AYLDGPLPQESGVAAIRNL---VGSVSVETYFKIIPSLVHVLKSG-SIGAQQAAASTICR 419
Query: 490 IASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLA-AGAV 548
IA+ E +++IGE+ IP L+ M+ +++ A AI L+ N +V
Sbjct: 420 IATSNETKRMIGESG-CIPLLIRMLEAKASGAREVAAQAIASLVTVPRNCREVKRDEKSV 478
Query: 549 PLLLNLLTSSDSEELITDSLAVLATLAEKLDGTIAILHHGALDMIMKI 596
L+ LL S +++ LA L ++ HGA+ + K+
Sbjct: 479 TSLVMLLEPSPGNSAKKYAVSGLAALCSSRKCKKLMVSHGAVGYLKKL 526
>TAIR|locus:2055033 [details] [associations]
symbol:ARABIDILLO-1 "AT2G44900" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0048527
"lateral root development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR001810
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181
SMART:SM00185 SMART:SM00256 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0048527 EMBL:AC002388 IPI:IPI00521082
PIR:T00403 RefSeq:NP_566029.1 UniGene:At.53128 HSSP:Q02248
ProteinModelPortal:O22161 SMR:O22161 PaxDb:O22161 PRIDE:O22161
EnsemblPlants:AT2G44900.1 GeneID:819099 KEGG:ath:AT2G44900
TAIR:At2g44900 eggNOG:NOG48141 HOGENOM:HOG000029512
InParanoid:O22161 OMA:MDDESAN PhylomeDB:O22161
ProtClustDB:CLSN2685043 Genevestigator:O22161 Uniprot:O22161
Length = 930
Score = 133 (51.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 50/212 (23%), Positives = 90/212 (42%)
Query: 371 LAAEGAMKLLANFISDRLLEGTSEEKNKVAYEVRLLTKSSIFNRSCLVEVGCIPXXXXXX 430
+A G + L + EG E+ + + S+ N + E G +
Sbjct: 560 VAKAGGVHALVMLARNCKYEGVQEQAARALANLAAHGDSNNNNAAVGQEAGALEALVQLT 619
Query: 431 XXXXXXTQENAIAALLNLSKHCKSKSMVVESGGLDFIVDMVKK--GLKVEARQHAAATLF 488
++ A AL NLS K++ + +GG++ +V + + ++ AA L+
Sbjct: 620 KSPHEGVRQEAAGALWNLSFDDKNRESISVAGGVEALVALAQSCSNASTGLQERAAGALW 679
Query: 489 YIASIEEYRKLIGENPEAIPALVDMVRDGTDRSKKNALVAIFGLLMHSGNHWRFLAAGAV 548
++ E IG +P L+ + R + + A A++ L + GN R + G V
Sbjct: 680 GLSVSEANSVAIGREG-GVPPLIALARSEAEDVHETAAGALWNLAFNPGNALRIVEEGGV 738
Query: 549 PLLLNLLTSSDSEELITDSLAVLATLAEKLDG 580
P L++L +SS S+ + +A LA LA DG
Sbjct: 739 PALVHLCSSSVSK--MARFMAALA-LAYMFDG 767
Score = 37 (18.1 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 142 AIDVSSEVKELVDLVMR 158
AI + VK LVDL+ R
Sbjct: 515 AIAQAGGVKALVDLIFR 531
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 685 642 0.00093 120 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 82
No. of states in DFA: 620 (66 KB)
Total size of DFA: 319 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 46.50u 0.52s 47.02t Elapsed: 00:00:03
Total cpu time: 46.53u 0.52s 47.05t Elapsed: 00:00:03
Start: Fri May 10 04:59:38 2013 End: Fri May 10 04:59:41 2013