BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039019
(292 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZUX7|IPT2_ARATH tRNA dimethylallyltransferase 2 OS=Arabidopsis thaliana GN=IPT2
PE=1 SV=2
Length = 466
Score = 286 bits (731), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/267 (56%), Positives = 187/267 (70%), Gaps = 13/267 (4%)
Query: 10 GQNWGRVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGL 69
+NWG ++ RF+ C IC+DA VLDRYVEQRVD M+DAGLLDEVYDIY ADYTRGL
Sbjct: 213 AENWGCINASRFDYCLICMDAETAVLDRYVEQRVDAMVDAGLLDEVYDIYKPGADYTRGL 272
Query: 70 RQAIGVREFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLK 129
RQ+IGVREFEDFL ++ S L S + DDK +K+ +R IL DD+L+
Sbjct: 273 RQSIGVREFEDFLKIH--------LSETCAGHLTSLSNDDKVMKENLRKILNFPKDDKLR 324
Query: 130 VLLEEAIDRVKLNTRRLVRCQKRRLNRLQTLFGWDIHYVDSTESISCKSDEVWTAQVVGP 189
++LEEAIDRVKLNTRRL+R QKRR++RL+T+FGW+IHY+D+TE I KS+E W AQVV P
Sbjct: 325 IMLEEAIDRVKLNTRRLLRRQKRRVSRLETVFGWNIHYIDATEYILSKSEESWNAQVVKP 384
Query: 190 AVKTIRAFLSEDERLMPNLAGMIGTSVNSTERDLWTQYVCKACGDKVLRGAYEWEQHKQG 249
A + IR FL + +G TS S ERDLWTQYVC+ACG+K+LRG +EWE HKQG
Sbjct: 385 ASEIIRCFLETETE-----SGRDPTSGKSIERDLWTQYVCEACGNKILRGRHEWEHHKQG 439
Query: 250 RRHRKRIYNLRKSQRFSSAGQQHQQQN 276
R HRKR + SQ + + Q + N
Sbjct: 440 RTHRKRTTRHKNSQTYKNREVQEAEVN 466
>sp|Q94ID2|IPT5_ARATH Adenylate isopentenyltransferase 5, chloroplastic OS=Arabidopsis
thaliana GN=IPT5 PE=1 SV=2
Length = 330
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 97/185 (52%), Gaps = 38/185 (20%)
Query: 19 FRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYN-ANADYTRGLRQAIGVRE 77
R+NCCF+ VD + PVL +V +RVD M+D GL+DEV I++ +++DY+ G+R+AIGV E
Sbjct: 148 LRYNCCFLWVDVSRPVLHSFVSERVDKMVDMGLVDEVRRIFDPSSSDYSAGIRRAIGVPE 207
Query: 78 FEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLLEEAID 137
++FL R+ +++ + + LLE AI+
Sbjct: 208 LDEFL----------------------------------RSEMRNYPAETTERLLETAIE 233
Query: 138 RVKLNTRRLVRCQKRRLNRLQTLFGWDIHYVDSTESI---SCKSDEVWTAQVVGPAVKTI 194
++K NT L Q +++ RL + W++H VD+TE ++DE W V P+ +
Sbjct: 234 KIKENTCLLACRQLQKIQRLYKQWKWNMHRVDATEVFLRRGEEADEAWDNSVAHPSALAV 293
Query: 195 RAFLS 199
FLS
Sbjct: 294 EKFLS 298
>sp|Q94ID1|IPT7_ARATH Adenylate isopentenyltransferase 7, mitochondrial OS=Arabidopsis
thaliana GN=IPT7 PE=2 SV=2
Length = 329
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 39/188 (20%)
Query: 21 FNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGLRQAIGVREFED 80
++CCFI VD + PVL+ +V +RVD M++AGLL+EV +++N A+Y+ G+R+AIGV E +
Sbjct: 152 YDCCFIWVDVSLPVLNSFVSKRVDRMMEAGLLEEVREVFNPKANYSVGIRRAIGVPELHE 211
Query: 81 FLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLLEEAIDRVK 140
+L VDR K+ +L+ A+ +K
Sbjct: 212 YLRNESLVDRATKSK-----------------------------------MLDVAVKNIK 236
Query: 141 LNTRRLVRCQKRRLNRLQTLFGWDIHYVDSTESISCKS----DEVWTAQVVGPAVKTIRA 196
NT L Q +++ RL + +H VD+TE ++ DE W V P+ + +
Sbjct: 237 KNTEILACRQLKKIQRLHKKWKMSMHRVDATEVFLKRNVEEQDEAWENLVARPSERIVDK 296
Query: 197 FLSEDERL 204
F + + +L
Sbjct: 297 FYNNNNQL 304
>sp|Q9LJL4|IPT8_ARATH Adenylate isopentenyltransferase 8, chloroplastic OS=Arabidopsis
thaliana GN=IPT8 PE=2 SV=1
Length = 330
Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 33/189 (17%)
Query: 18 NFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEV---YDI-YNANADYTRGLRQAI 73
R+ CCF+ VD + VL Y+ +RVD M+++G+ +E+ YD Y+ +A G+ + I
Sbjct: 170 GLRYECCFLWVDVSVSVLFEYLSKRVDQMMESGMFEELAGFYDPRYSGSAIRAHGIHKTI 229
Query: 74 GVREFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLLE 133
G+ EF+ + S+Y +R K S D K +
Sbjct: 230 GIPEFDRYFSLYPP-ERKQKM---------------------------SEWDQARKGAYD 261
Query: 134 EAIDRVKLNTRRLVRCQKRRLNRLQTLFGWDIHYVDSTESISCKSDEVWTAQVVGPAVKT 193
EA+ +K NT RL + Q R+ +L++ GWDI +D+T S S E+W V+ ++K
Sbjct: 262 EAVQEIKENTWRLAKKQIERIMKLKSS-GWDIQRLDATPSFGRSSREIWDNTVLDESIKV 320
Query: 194 IRAFLSEDE 202
++ FL +D+
Sbjct: 321 VKRFLVKDK 329
>sp|Q93WC9|IPT3_ARATH Adenylate isopentenyltransferase 3, chloroplastic OS=Arabidopsis
thaliana GN=IPT3 PE=1 SV=1
Length = 336
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 93/185 (50%), Gaps = 41/185 (22%)
Query: 20 RFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYN-ANADYTRGLRQAIGVREF 78
R++CCF+ VD A PVL +V +RVD M+++G+++EV + ++ +N+DY+RG+++AIG EF
Sbjct: 157 RYDCCFLWVDVALPVLHGFVSERVDKMVESGMVEEVREFFDFSNSDYSRGIKKAIGFPEF 216
Query: 79 EDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLLEEAIDR 138
+ F LN ++++ LL + ++
Sbjct: 217 DRFFR--------------NEQFLNVEDREE---------------------LLSKVLEE 241
Query: 139 VKLNTRRLVRCQKRRLNRLQTLFGWDIHYVDSTESISCKSDEV-----WTAQVVGPAVKT 193
+K NT L Q+ ++ RL+ + W I VD+T + + ++ W V GP+ T
Sbjct: 242 IKRNTFELACRQREKIERLRKVKKWSIQRVDATPVFTKRRSKMDANVAWERLVAGPSTDT 301
Query: 194 IRAFL 198
+ FL
Sbjct: 302 VSRFL 306
>sp|Q5GHF7|IPT_HUMLU Adenylate isopentenyltransferase OS=Humulus lupulus PE=1 SV=1
Length = 329
Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 43/198 (21%)
Query: 18 NFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANAD------YTR-GLR 70
R++CCF+ VD + VL Y+ +RVD M++ G+ DE+ + Y+ + TR GLR
Sbjct: 160 ELRYDCCFLWVDVSVKVLTDYLAKRVDDMLELGMFDELAEFYSPEDEDHDEDSATRTGLR 219
Query: 71 QAIGVREFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKV 130
+AIGV EF+ + + D + + G +D +R +
Sbjct: 220 KAIGVPEFDRYFEKFRPGDVEGEDPG----------------RDRVR-----------RG 252
Query: 131 LLEEAIDRVKLNTRRLVRCQKRRLNRLQTLFGWDIHYVDSTESISC--------KSDEVW 182
EEA+ +K NT L + Q ++ RL+ GWD+ +D+TES K E+W
Sbjct: 253 AFEEAVRAIKENTCHLAKRQIGKILRLKGA-GWDLRRLDATESFRAAMTSDSGEKCTEIW 311
Query: 183 TAQVVGPAVKTIRAFLSE 200
QV+ P+VK + FL E
Sbjct: 312 EKQVLEPSVKIVSRFLDE 329
>sp|Q94ID3|IPT1_ARATH Adenylate isopentenyltransferase 1, chloroplastic OS=Arabidopsis
thaliana GN=IPT1 PE=1 SV=2
Length = 357
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 45/197 (22%)
Query: 18 NFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEV---YDIYNANADYTRGLRQAIG 74
+ R+ CCFI VD + VL Y+ +RVD M+D+G+ +E+ YD + + G+R+AIG
Sbjct: 193 DLRYECCFIWVDVSETVLYEYLLRRVDEMMDSGMFEELSRFYDPVKSGLETRFGIRKAIG 252
Query: 75 VREFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLK-DCMRAILKSSADDQLKVLLE 133
V EF+ + Y + K +K D +R K +
Sbjct: 253 VPEFDGYFKEYPP--------------------EKKMIKWDALR-----------KAAYD 281
Query: 134 EAIDRVKLNTRRLVRCQKRRLNRLQTLFGWDIHYVDSTESISC---------KSDEVWTA 184
+A+D +K NT L + Q +++ L+ GW+I VD+T S K E W
Sbjct: 282 KAVDDIKRNTWTLAKRQVKKIEMLKDA-GWEIERVDATASFKAVMMKSSSEKKWRENWEE 340
Query: 185 QVVGPAVKTIRAFLSED 201
QV+ P+VK ++ L ++
Sbjct: 341 QVLEPSVKIVKRHLVQN 357
>sp|Q9C6L1|IPT6_ARATH Adenylate isopentenyltransferase 6, chloroplastic OS=Arabidopsis
thaliana GN=IPT6 PE=2 SV=1
Length = 342
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 45/197 (22%)
Query: 18 NFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTR--GLRQAIGV 75
+ R+ CC + VD PVL +++ RVD MI++GL++++ ++Y+ D R G+R+ IGV
Sbjct: 176 DLRYKCCILWVDVLEPVLFQHLCNRVDQMIESGLVEQLAELYDPVVDSGRRLGVRKTIGV 235
Query: 76 REFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLLEEA 135
EF+ + VY + DK + D R K EE
Sbjct: 236 EEFDRYFRVY-------------------PKEMDKGIWDLAR-----------KAAYEET 265
Query: 136 IDRVKLNTRRLVRCQKRRLNRLQTLFGWDIHYVDSTESISCKSD------------EVWT 183
+ +K T RLV+ QK ++ +L GW+I +D+T +I + + E+W
Sbjct: 266 VKGMKERTCRLVKKQKEKIMKL-IRGGWEIKRLDATAAIMAELNQSTAKGEGKNGREIWE 324
Query: 184 AQVVGPAVKTIRAFLSE 200
+V +V+ ++ FL E
Sbjct: 325 KHIVDESVEIVKKFLLE 341
>sp|Q9SB60|IPT4_ARATH Adenylate isopentenyltransferase 4 OS=Arabidopsis thaliana GN=IPT4
PE=1 SV=1
Length = 318
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 46/197 (23%)
Query: 19 FRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNAN--ADYTRGLRQAIGVR 76
+++CCFI +D VL Y+ R+D M+ +G+ +E+ + + + G+ +AIGV+
Sbjct: 134 LKYDCCFIWIDVDQSVLFEYLSLRLDLMMKSGMFEEIAEFHRSKKAPKEPLGIWKAIGVQ 193
Query: 77 EFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLLEEAI 136
EF+D+L +Y + +D D MR K E+A+
Sbjct: 194 EFDDYLKMY-------------------KWDNDMDKWDPMR-----------KEAYEKAV 223
Query: 137 DRVKLNTRRLVRCQKRRLNRLQTLFGWDIHYVDSTESI-----SCKSDE--------VWT 183
+K NT +L + Q ++N+L+ GWDI VD+T S + K E +W
Sbjct: 224 RAIKENTFQLTKDQITKINKLRNA-GWDIKKVDATASFREAIRAAKEGEGVAEMQRKIWN 282
Query: 184 AQVVGPAVKTIRAFLSE 200
+V+ P VK +R+ L +
Sbjct: 283 KEVLEPCVKIVRSHLDQ 299
>sp|Q80UN9|MOD5_MOUSE tRNA dimethylallyltransferase, mitochondrial OS=Mus musculus
GN=Trit1 PE=2 SV=2
Length = 467
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 65/269 (24%)
Query: 20 RF-NCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEV------YDIYNANA---DYTRGL 69
RF N C + + A VLD +++RVD M+ AGLL+E+ Y++ N + DY G+
Sbjct: 220 RFPNPCILWLHADQAVLDERLDKRVDDMLAAGLLEELRGFHRRYNLKNISENSQDYQHGI 279
Query: 70 RQAIGVREFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLK 129
Q+IG +EF ++L+ T G T + N+
Sbjct: 280 FQSIGFKEFHEYLT----------TEG--KCTPETSNQ---------------------- 305
Query: 130 VLLEEAIDRVKLNTRRLVRCQKRRL-NRLQTLFGWDIHYVDSTESISCKSDEVWTAQVVG 188
LL++ I+ +K T+R R Q R + NR + G + V E W V+
Sbjct: 306 -LLKKGIEALKQVTKRYARKQNRWVKNRFLSRPGPSVPPVYGLEVSDVSK---WEESVLE 361
Query: 189 PAVKTIRAFL-SEDERLMPNLAGMIGTSVNSTERDLWTQYVCKACGDKVLRGAYEWEQHK 247
PA+ +++F+ MP + + N +E + + ++C C D+++ G EW H
Sbjct: 362 PALNIVQSFIQGHKPTAMP-----VKMAYNESE-NKRSYHMCDLC-DRIIIGDREWAAHL 414
Query: 248 QGRRHRKRIYNLRKSQRF-----SSAGQQ 271
+ + H ++ L+K +R S+ G Q
Sbjct: 415 KSKSH---LHQLKKRRRLDLDAVSATGSQ 440
>sp|Q9H3H1|MOD5_HUMAN tRNA dimethylallyltransferase, mitochondrial OS=Homo sapiens
GN=TRIT1 PE=1 SV=1
Length = 467
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 64/289 (22%)
Query: 22 NCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDI---YNA------NADYTRGLRQA 72
N C + + A VLD +++RVD M+ AGLL+E+ D YN + DY G+ Q+
Sbjct: 223 NPCILWLHADQAVLDERLDKRVDDMLAAGLLEELRDFHRRYNQKNVSENSQDYQHGIFQS 282
Query: 73 IGVREFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLL 132
IG +EF ++L T G TL + N+ LL
Sbjct: 283 IGFKEFHEYLI----------TEG--KCTLETSNQ-----------------------LL 307
Query: 133 EEAIDRVKLNTRRLVRCQKRRL-NRLQTLFGWDIHYVDSTESISCKSDEVWTAQVVGPAV 191
++ I+ +K T+R R Q R + NR + G + V E W V+ PA+
Sbjct: 308 KKGIEALKQVTKRYARKQNRWVKNRFLSRPGPIVPPVYGLEVSDVSK---WEESVLEPAL 364
Query: 192 KTIRAFLSEDERLMPNLAGMIGTSVNSTERDLWTQYVCKACGDKVLRGAYEWEQHKQGRR 251
+ +++F+ + A I N E + + ++C C D+++ G EW H + +
Sbjct: 365 EIVQSFIQGHK----PTATPIKMPYNEAE-NKRSYHLCDLC-DRIIIGDREWAAHIKSKS 418
Query: 252 H------RKRI----YNLRKSQRFSSAGQQHQQQNTSVATEQSSMSCQV 290
H R+R+ N +SQ S + ++ S + C V
Sbjct: 419 HLNQLKKRRRLDSDAVNTIESQSVSPDHNKEPKEKGSPGQNDQELKCSV 467
>sp|Q2RJG0|MIAA_MOOTA tRNA dimethylallyltransferase OS=Moorella thermoacetica (strain
ATCC 39073) GN=miaA PE=3 SV=1
Length = 324
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 64/168 (38%), Gaps = 46/168 (27%)
Query: 9 AGQNWGRVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRG 68
A W R ++ + + P+L R +E RVD MI AGL++EV + A DY
Sbjct: 188 AALAWRRQQESPYHLAAVALSMPRPLLYRRIEARVDAMIAAGLIEEVSRLL-ARYDYRLP 246
Query: 69 LRQAIGVREFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQL 128
QA+G +E +L +
Sbjct: 247 ALQALGYKEIGAYL--------------------------------------------RK 262
Query: 129 KVLLEEAIDRVKLNTRRLVRCQKRRLNRLQTLFGWDIHYVDSTESISC 176
++ LEEAI +K NTRRL + Q R + L W++ D E IS
Sbjct: 263 EIELEEAIAILKRNTRRLAKRQLTWFRRDRRLHWWEVD-PDKIEEISA 309
>sp|P07884|MOD5_YEAST tRNA dimethylallyltransferase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MOD5 PE=1
SV=2
Length = 428
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 109/265 (41%), Gaps = 68/265 (25%)
Query: 19 FRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEV---YDIYNANADYT-----RGLR 70
+F+ F+ + + L + ++ RVD M++ G L E+ Y+ Y+ N +T G+
Sbjct: 197 LKFDTLFLWLYSKPEPLFQRLDDRVDDMLERGALQEIKQLYEYYSQNK-FTPEQCENGVW 255
Query: 71 QAIGVREFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKV 130
Q IG +EF +L+ G T DD T+K
Sbjct: 256 QVIGFKEFLPWLT------------GKT---------DDNTVK----------------- 277
Query: 131 LLEEAIDRVKLNTRRLVRCQKRRLNRLQTL-FGWDIHYVDSTESISCKSDEVWTAQVVGP 189
LE+ I+R+K TR+ + Q + + ++ DI+ +D+T+ W
Sbjct: 278 -LEDCIERMKTRTRQYAKRQVKWIKKMLIPDIKGDIYLLDATDLSQ------WDTNASQR 330
Query: 190 AVKTIRAFLS----EDERLMPNLAGMIGTSVNSTER-DLWTQYVCKAC----GDKVLR-G 239
A+ F+S + ER L ++ + ++ D WT Y C C G V+ G
Sbjct: 331 AIAISNDFISNRPIKQERAPKALEELLSKGETTMKKLDDWTHYTCNVCRNADGKNVVAIG 390
Query: 240 AYEWEQHKQGRRHRKRIYNLRKSQR 264
W+ H RRH+ NL+++ R
Sbjct: 391 EKYWKIHLGSRRHKS---NLKRNTR 412
>sp|A7Z500|MIAA_BACA2 tRNA dimethylallyltransferase OS=Bacillus amyloliquefaciens (strain
FZB42) GN=miaA PE=3 SV=1
Length = 314
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 3 LNLLHVAGQNWG-----RVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L +LHV+G+ + +N I + VL + +RVD M++ GLLDEV
Sbjct: 169 LEILHVSGKTMSEHLKTQKRELLYNAVLIGLTMDREVLYGRINERVDLMLETGLLDEVKR 228
Query: 58 IYNANADYTRGLRQAIGVREFEDFL 82
+Y+ N ++ + QAIG +E ++L
Sbjct: 229 LYDMNIRDSQSI-QAIGYKELYEYL 252
>sp|A8FDI9|MIAA_BACP2 tRNA dimethylallyltransferase OS=Bacillus pumilus (strain SAFR-032)
GN=miaA PE=3 SV=2
Length = 318
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 16/90 (17%)
Query: 3 LNLLHVAGQNWGRVDNFR-----FNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L ++H GQ + N ++ FI + +L + QR+D MID GL++EV
Sbjct: 169 LEVIHTTGQKMSEMQNGHQEVPLYDTAFIGLKMDRELLYERIHQRIDMMIDEGLIEEV-- 226
Query: 58 IYNANADYTRGLR-----QAIGVREFEDFL 82
+A Y GL+ QAIG +E +
Sbjct: 227 ----SALYQSGLKDCQSVQAIGYKELYTYF 252
>sp|A4IMI5|MIAA_GEOTN tRNA dimethylallyltransferase OS=Geobacillus thermodenitrificans
(strain NG80-2) GN=miaA PE=3 SV=1
Length = 315
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 16/97 (16%)
Query: 3 LNLLHVAGQNW-----GRVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L + H G+ + G+ + I + A VL R + +RVD MI GL++EV
Sbjct: 166 LEVYHCTGKPFSEWQRGQQRQLLYETALIGLTAERSVLYRRINERVDEMIAEGLIEEVRS 225
Query: 58 IYNANADYTRGLR-----QAIGVREFEDFLSVYHSVD 89
+Y+ RGLR QAIG +E D+ S+D
Sbjct: 226 LYD------RGLRDCQAVQAIGYKELYDYFDGRVSLD 256
>sp|Q5L0D9|MIAA_GEOKA tRNA dimethylallyltransferase OS=Geobacillus kaustophilus (strain
HTA426) GN=miaA PE=3 SV=1
Length = 315
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 16/97 (16%)
Query: 3 LNLLHVAGQNW-----GRVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L + H G+ + G+ + + + A L R + +RVD MI AGL++E
Sbjct: 166 LEVYHCTGKPFSEWQQGQSKRLLYEAAIVGLTAEREALYRRINERVDEMIAAGLIEE--- 222
Query: 58 IYNANADYTRGLR-----QAIGVREFEDFLSVYHSVD 89
A A Y RGLR QAIG +E D+ S+D
Sbjct: 223 ---ARALYDRGLRDCQAVQAIGYKELYDYFDGRVSLD 256
>sp|Q38W03|MIAA_LACSS tRNA dimethylallyltransferase OS=Lactobacillus sakei subsp. sakei
(strain 23K) GN=miaA PE=3 SV=1
Length = 310
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 18 NFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGLRQAIGVRE 77
R++ I ++ PVL + QRVD M+DAGL++E Y A + +R IG +E
Sbjct: 187 ELRYDTFIIGLNCERPVLYERINQRVDQMVDAGLIEEARWAYERRATSPQAVR-GIGYKE 245
Query: 78 FEDFL 82
F +
Sbjct: 246 FFPYF 250
>sp|Q5WFY6|MIAA_BACSK tRNA dimethylallyltransferase OS=Bacillus clausii (strain KSM-K16)
GN=miaA PE=3 SV=1
Length = 310
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 3 LNLLHVAGQNWGRVDNF----RFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDI 58
L ++H+ G+ + +N RF+ I ++ L + +RVD M++AGLL+EV+ +
Sbjct: 167 LEVIHLTGKPFSEQENGLARPRFDNVLIGLEMERQALYERINRRVDAMMEAGLLEEVHRL 226
Query: 59 YNANADYTRGLR----QAIGVREFEDFL 82
Y RG++ QAIG +E +
Sbjct: 227 YQ------RGIQGQAIQAIGYKELYAYF 248
>sp|Q81JG8|MIAA_BACAN tRNA dimethylallyltransferase OS=Bacillus anthracis GN=miaA PE=3
SV=1
Length = 314
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 3 LNLLHVAGQNWG-----RVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L + H +G+ + + ++ I + +L + RVD M+D GLL+EV
Sbjct: 167 LEIFHTSGEKMSDQLEKQENELLYDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEG 226
Query: 58 IYNANADYTRGLR-----QAIGVRE----FEDFLSVYHSV 88
+YN RG+R QAIG +E FED +S+ +V
Sbjct: 227 LYN------RGIRDCQSIQAIGYKEIYDYFEDRVSLEEAV 260
>sp|A0RH88|MIAA_BACAH tRNA dimethylallyltransferase OS=Bacillus thuringiensis (strain Al
Hakam) GN=miaA PE=3 SV=1
Length = 320
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 3 LNLLHVAGQNWG-----RVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L + H +G+ + + ++ I + +L + RVD M+D GLL+EV
Sbjct: 173 LEIFHTSGEKMSDQLEKQENELLYDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEG 232
Query: 58 IYNANADYTRGLR-----QAIGVRE----FEDFLSVYHSV 88
+YN RG+R QAIG +E FED +S+ +V
Sbjct: 233 LYN------RGIRDCQSIQAIGYKEIYDYFEDRVSLEEAV 266
>sp|Q65JA9|MIAA_BACLD tRNA dimethylallyltransferase OS=Bacillus licheniformis (strain DSM
13 / ATCC 14580) GN=miaA PE=3 SV=1
Length = 314
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 3 LNLLHVAGQNW-----GRVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L +LH G+ G+ + I + VL + RVD M+D GLLDEV
Sbjct: 169 LEILHTTGKTMSEHMEGQRKELLYTTALIGLTMEREVLYDRINSRVDQMMDEGLLDEVKL 228
Query: 58 IYNANADYTRGLRQAIGVREF 78
+Y+ N + + QAIG +E
Sbjct: 229 LYDENVRNCQSV-QAIGYKEL 248
>sp|Q6HF97|MIAA_BACHK tRNA dimethylallyltransferase OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=miaA PE=3 SV=1
Length = 317
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 3 LNLLHVAGQNWG-----RVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L + H +G+ + + ++ I + +L + RVD M+D GLL+EV
Sbjct: 170 LEIFHTSGEKMSDQLEKQENELLYDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEG 229
Query: 58 IYNANADYTRGLR-----QAIGVRE----FEDFLSVYHSV 88
+YN RG+R QAIG +E FED +S+ +V
Sbjct: 230 LYN------RGIRDCQSIQAIGYKEIYDYFEDRVSLEEAV 263
>sp|Q636W2|MIAA_BACCZ tRNA dimethylallyltransferase OS=Bacillus cereus (strain ZK / E33L)
GN=miaA PE=3 SV=1
Length = 317
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 3 LNLLHVAGQNWG-----RVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L + H +G+ + + ++ I + +L + RVD M+D GLL+EV
Sbjct: 170 LEIFHTSGEKMSDQLEKQENELLYDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEG 229
Query: 58 IYNANADYTRGLR-----QAIGVRE----FEDFLSVYHSV 88
+YN RG+R QAIG +E FED +S+ +V
Sbjct: 230 LYN------RGIRDCQSIQAIGYKEIYDYFEDRVSLEEAV 263
>sp|C1ENE7|MIAA_BACC3 tRNA dimethylallyltransferase OS=Bacillus cereus (strain 03BB102)
GN=miaA PE=3 SV=1
Length = 317
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 3 LNLLHVAGQNWG-----RVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L + H +G+ + + ++ I + +L + RVD M+D GLL+EV
Sbjct: 170 LEIFHTSGEKMSDQLEKQENELLYDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEG 229
Query: 58 IYNANADYTRGLR-----QAIGVRE----FEDFLSVYHSV 88
+YN RG+R QAIG +E FED +S+ +V
Sbjct: 230 LYN------RGIRDCQSIQAIGYKEIYDYFEDRVSLEEAV 263
>sp|C3L886|MIAA_BACAC tRNA dimethylallyltransferase OS=Bacillus anthracis (strain CDC 684
/ NRRL 3495) GN=miaA PE=3 SV=1
Length = 317
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 3 LNLLHVAGQNWG-----RVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L + H +G+ + + ++ I + +L + RVD M+D GLL+EV
Sbjct: 170 LEIFHTSGEKMSDQLEKQENELLYDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEG 229
Query: 58 IYNANADYTRGLR-----QAIGVRE----FEDFLSVYHSV 88
+YN RG+R QAIG +E FED +S+ +V
Sbjct: 230 LYN------RGIRDCQSIQAIGYKEIYDYFEDRVSLEEAV 263
>sp|C3P4Y4|MIAA_BACAA tRNA dimethylallyltransferase OS=Bacillus anthracis (strain A0248)
GN=miaA PE=3 SV=1
Length = 317
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 3 LNLLHVAGQNWG-----RVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L + H +G+ + + ++ I + +L + RVD M+D GLL+EV
Sbjct: 170 LEIFHTSGEKMSDQLEKQENELLYDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEG 229
Query: 58 IYNANADYTRGLR-----QAIGVRE----FEDFLSVYHSV 88
+YN RG+R QAIG +E FED +S+ +V
Sbjct: 230 LYN------RGIRDCQSIQAIGYKEIYDYFEDRVSLEEAV 263
>sp|B7JIE1|MIAA_BACC0 tRNA dimethylallyltransferase OS=Bacillus cereus (strain AH820)
GN=miaA PE=3 SV=1
Length = 317
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 3 LNLLHVAGQNWG-----RVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L + H +G+ + + ++ I + +L + RVD M+D GLL+EV
Sbjct: 170 LEIFHTSGEKMSDQLEKQENELLYDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEG 229
Query: 58 IYNANADYTRGLR-----QAIGVRE----FEDFLSVYHSV 88
+YN RG+R QAIG +E FED +S+ +V
Sbjct: 230 LYN------RGIRDCQSIQAIGYKEIYDYFEDRVSLEEAV 263
>sp|Q03RP7|MIAA_LACBA tRNA dimethylallyltransferase OS=Lactobacillus brevis (strain ATCC
367 / JCM 1170) GN=miaA PE=3 SV=1
Length = 307
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 3 LNLLHVAGQNWGRVDNF--RFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEV 55
L ++ V GQ + N +++ +I ++ A P+L + QRVD M+ AGLLDEV
Sbjct: 166 LEVIQVTGQLFSHQQNAGSQYDEYYIGLNTARPLLYERINQRVDNMVQAGLLDEV 220
>sp|A4VVZ3|MIAA_STRSY tRNA dimethylallyltransferase OS=Streptococcus suis (strain
05ZYH33) GN=miaA PE=3 SV=1
Length = 294
Score = 40.0 bits (92), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 65/164 (39%), Gaps = 53/164 (32%)
Query: 21 FNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGLRQAIGVREFED 80
+ +IC+ VL + QRVD M+ AGLLDEV +Y + + + IG +EF
Sbjct: 177 YEPLYICLTDDRQVLYDRINQRVDKMMAAGLLDEVSWLYQEHPEAQAAM--GIGYKEFFP 234
Query: 81 FLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLLEEAIDRVK 140
+L + ++ LEEAID VK
Sbjct: 235 YL--------------------------------------------EGQISLEEAIDNVK 250
Query: 141 LNTRRLVRCQKRRLNRLQTLFGWDIHYVDSTESISCKSDEVWTA 184
N+RR KR+L + D + V S E++ D ++TA
Sbjct: 251 QNSRRFA---KRQLTWFRNRMAVDFYQV-SEEAV---KDRIYTA 287
>sp|B7HKR9|MIAA_BACC7 tRNA dimethylallyltransferase OS=Bacillus cereus (strain AH187)
GN=miaA PE=3 SV=1
Length = 317
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 20/100 (20%)
Query: 3 LNLLHVAGQNWG-----RVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L + H G+ + + ++ I + +L + RVD M+D GLL+EV
Sbjct: 170 LEIFHTTGEKMSDQLEKQENELLYDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEG 229
Query: 58 IYNANADYTRGLR-----QAIGVRE----FEDFLSVYHSV 88
+YN RG+R QAIG +E FED +S+ +V
Sbjct: 230 LYN------RGIRDCQSIQAIGYKEIYDYFEDRVSLEEAV 263
>sp|B9IUM7|MIAA_BACCQ tRNA dimethylallyltransferase OS=Bacillus cereus (strain Q1)
GN=miaA PE=3 SV=1
Length = 317
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 20/100 (20%)
Query: 3 LNLLHVAGQNWG-----RVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L + H G+ + + ++ I + +L + RVD M+D GLL+EV
Sbjct: 170 LEIFHTTGEKMSDQLEKQENELLYDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEG 229
Query: 58 IYNANADYTRGLR-----QAIGVRE----FEDFLSVYHSV 88
+YN RG+R QAIG +E FED +S+ +V
Sbjct: 230 LYN------RGIRDCQSIQAIGYKEIYDYFEDRVSLEEAV 263
>sp|Q733B9|MIAA_BACC1 tRNA dimethylallyltransferase OS=Bacillus cereus (strain ATCC
10987) GN=miaA PE=3 SV=1
Length = 317
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 20/100 (20%)
Query: 3 LNLLHVAGQNWG-----RVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L + H G+ + + ++ I + +L + RVD M+D GLL+EV
Sbjct: 170 LEIFHTTGEKMSDQLEKQENELLYDVSLIGLTMDREMLYDRINLRVDIMMDQGLLEEVEG 229
Query: 58 IYNANADYTRGLR-----QAIGVRE----FEDFLSVYHSV 88
+YN RG+R QAIG +E FED +S+ +V
Sbjct: 230 LYN------RGIRDCQSIQAIGYKEIYDYFEDRVSLEEAV 263
>sp|O31795|MIAA_BACSU tRNA dimethylallyltransferase OS=Bacillus subtilis (strain 168)
GN=miaA PE=3 SV=2
Length = 314
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 3 LNLLHVAGQNWGR-----VDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L +LH +G+ + +N I + L + QRVD M+ +GLL EV
Sbjct: 169 LEILHTSGKTMSQHLKEQKRELLYNAVLIGLTMDRDTLYERINQRVDLMMQSGLLPEVKR 228
Query: 58 IYNANADYTRGLRQAIGVRE----FEDFLSVYHSVDRDNKTS 95
+Y+ N + + QAIG +E F+ F+++ +V++ + S
Sbjct: 229 LYDKNVRDCQSI-QAIGYKELYAYFDGFVTLSDAVEQLKQNS 269
>sp|Q049I6|MIAA_LACDB tRNA dimethylallyltransferase OS=Lactobacillus delbrueckii subsp.
bulgaricus (strain ATCC BAA-365) GN=miaA PE=3 SV=1
Length = 308
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 20 RFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGLRQAIGVREFE 79
R++ I +++ + + + QRVD M++AGLL+E +Y A + L QAIG +EF
Sbjct: 186 RYDYLIIGLNSDREAIYQRINQRVDLMMEAGLLEEARFVYEHRAGEHQVL-QAIGYKEFF 244
Query: 80 DFLSVYHSVD 89
+ + S++
Sbjct: 245 PYFAGEASLE 254
>sp|Q1G9D6|MIAA_LACDA tRNA dimethylallyltransferase OS=Lactobacillus delbrueckii subsp.
bulgaricus (strain ATCC 11842 / DSM 20081) GN=miaA PE=3
SV=1
Length = 308
Score = 39.3 bits (90), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 20 RFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGLRQAIGVREFE 79
R++ I +++ + + + QRVD M++AGLL+E +Y A + L QAIG +EF
Sbjct: 186 RYDYLIIGLNSDREAIYQRINQRVDLMMEAGLLEEARFVYEHRAGEHQVL-QAIGYKEFF 244
Query: 80 DFLSVYHSVD 89
+ + S++
Sbjct: 245 PYFAGEASLE 254
>sp|Q6A5X5|G6PI_PROAC Glucose-6-phosphate isomerase OS=Propionibacterium acnes (strain
KPA171202 / DSM 16379) GN=pgi PE=3 SV=1
Length = 560
Score = 39.3 bits (90), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 25 FICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGLRQAIGVREFEDFLSV 84
F+ V A LD+ E +D + G V Y+ ++ L AIG + FEDFL+
Sbjct: 254 FVAVSTA---LDKVEEFGIDPVNAFGFWSWVGGRYSVDSAVGTSLAVAIGPKGFEDFLAG 310
Query: 85 YHSVDRDNKTSGP 97
+H+VD T+ P
Sbjct: 311 FHAVDEHFATAEP 323
>sp|B1HRH3|MIAA_LYSSC tRNA dimethylallyltransferase OS=Lysinibacillus sphaericus (strain
C3-41) GN=miaA PE=3 SV=1
Length = 300
Score = 39.3 bits (90), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 73/181 (40%), Gaps = 61/181 (33%)
Query: 3 LNLLHVAG-------QNWGRVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEV 55
L +L ++G QN G V + + + + VL + +RVD M++ GLL+EV
Sbjct: 172 LEMLELSGVSKAAEAQNRGEVPLYNHLILGLGQNMSREVLYDRINRRVDLMMENGLLEEV 231
Query: 56 YDIYNANADYTRGLR--QAIGVREFEDFLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLK 113
++ N RG++ QAIG +E D+L D K S
Sbjct: 232 QGLWQQN---IRGVQSIQAIGYKELYDYL--------DGKCS------------------ 262
Query: 114 DCMRAILKSSADDQLKVLLEEAIDRVKLNTRRLVRCQKRRLNRLQTLFGWDIHYVDSTES 173
LE AID +K N+RR KR+L + D+H+V + E
Sbjct: 263 ------------------LEGAIDSLKQNSRRYA---KRQLTYFRN--KMDVHFVMTGEQ 299
Query: 174 I 174
+
Sbjct: 300 L 300
>sp|Q041Y0|MIAA_LACGA tRNA dimethylallyltransferase OS=Lactobacillus gasseri (strain ATCC
33323 / DSM 20243) GN=miaA PE=3 SV=1
Length = 308
Score = 38.5 bits (88), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 20 RFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGLRQAIGVREFE 79
R++ I +++ + + + +RVD M++AGLL E +Y+ A + + QAIG +EF
Sbjct: 188 RYDALIIGLNSNREEVYQRINKRVDKMMNAGLLKEAKFVYDNRAREHQAI-QAIGYKEFF 246
Query: 80 DFLSVYHSVD 89
+ S ++D
Sbjct: 247 PYFSGEKTLD 256
>sp|Q9KAC3|MIAA_BACHD tRNA dimethylallyltransferase OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=miaA PE=1 SV=1
Length = 314
Score = 38.5 bits (88), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 21 FNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGLR-----QAIGV 75
+N I + VL + +RVD M++ GL+DE +Y+ RG+R QAIG
Sbjct: 190 YNLVMIGLTMERDVLYDRINRRVDQMVEEGLIDEAKKLYD------RGIRDCQSVQAIGY 243
Query: 76 REFEDFL 82
+E D+L
Sbjct: 244 KEMYDYL 250
>sp|Q493W0|MIAA_BLOPB tRNA dimethylallyltransferase OS=Blochmannia pennsylvanicus (strain
BPEN) GN=miaA PE=3 SV=1
Length = 304
Score = 38.5 bits (88), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
Query: 3 LNLLHVAGQNWGRVD-------NFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEV 55
L + ++G+ W + +RF+ F V ++ +L + +E+R M+D G DEV
Sbjct: 158 LEIFFISGKTWTELKLINNQKLKYRFHQ-FAVVPSSRDLLYKRIEERFHRMLDIGFEDEV 216
Query: 56 YDIYNANADYTRGLRQAI---GVREFEDFLS 83
++N + +T+ ++ +I G R+ ++LS
Sbjct: 217 IKLFNRSDLHTKEVKSSISCVGYRQMWEYLS 247
>sp|A4W2A2|MIAA_STRS2 tRNA dimethylallyltransferase OS=Streptococcus suis (strain
98HAH33) GN=miaA PE=3 SV=1
Length = 294
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 53/164 (32%)
Query: 21 FNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGLRQAIGVREFED 80
+ +IC+ VL + QRVD M+ AGLLDEV +Y + + + IG +EF
Sbjct: 177 YEPLYICLTDDRQVLYDRINQRVDKMMAAGLLDEVSWLYQEHPEAQAAM--GIGYKEFFP 234
Query: 81 FLSVYHSVDRDNKTSGPTNATLNSRNKDDKTLKDCMRAILKSSADDQLKVLLEEAIDRVK 140
+L + ++ L+EAID VK
Sbjct: 235 YL--------------------------------------------EGQISLKEAIDNVK 250
Query: 141 LNTRRLVRCQKRRLNRLQTLFGWDIHYVDSTESISCKSDEVWTA 184
N+RR KR+L + D + V S E++ D ++TA
Sbjct: 251 QNSRRFA---KRQLTWFRNRMAVDFYQV-SEEAV---KDRIYTA 287
>sp|Q9UT75|MOD5_SCHPO tRNA dimethylallyltransferase, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=tit1 PE=3 SV=1
Length = 434
Score = 38.1 bits (87), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 19 FRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNA------NADYTRGLRQA 72
R+ A + VL +++RVD M+ GL+DE+ + + + D+TRG+ Q
Sbjct: 198 LRYKSLIFWAFADSLVLMPRLDKRVDKMLSHGLVDEIKSMKSLAESEKFSPDFTRGIWQC 257
Query: 73 IGVREF 78
IG +EF
Sbjct: 258 IGFKEF 263
>sp|B1VXU2|MIAA_STRGG tRNA dimethylallyltransferase OS=Streptomyces griseus subsp.
griseus (strain JCM 4626 / NBRC 13350) GN=miaA PE=3 SV=1
Length = 312
Score = 37.7 bits (86), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 6/57 (10%)
Query: 17 DNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGLRQAI 73
D ++ I VD P LD + +RVD M DAGL+DEV + A GLR+ +
Sbjct: 186 DEPVYDAVQIGVDVERPELDERIARRVDRMWDAGLVDEVRALEAA------GLREGL 236
>sp|B5YE43|MIAA_DICT6 tRNA dimethylallyltransferase OS=Dictyoglomus thermophilum (strain
ATCC 35947 / DSM 3960 / H-6-12) GN=miaA PE=3 SV=1
Length = 326
Score = 37.7 bits (86), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 20 RFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGLRQAIGVREFE 79
RF I + + + +EQRVD MI+ GL+DEV ++Y D Q IG +E
Sbjct: 187 RFFVSKIGLYMPRELHYKILEQRVDKMIEKGLIDEVRNLYLKGIDERFVSMQGIGYKELL 246
Query: 80 DFL 82
+L
Sbjct: 247 KYL 249
>sp|Q39TZ3|MIAA_GEOMG tRNA dimethylallyltransferase OS=Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210) GN=miaA PE=3 SV=1
Length = 309
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 9 AGQNWGRVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRG 68
A Q R + + C + + +L R VE+RVD MI GL++EV + +A T
Sbjct: 181 AFQEAHRFADEPYRCLKLGITVERELLYRRVEERVDRMIAEGLVEEVRGLLSAGYPATLK 240
Query: 69 LRQAIGVREFEDFLSVYHSVD 89
+IG RE L+ S+D
Sbjct: 241 AMGSIGYREICAHLAGEFSLD 261
>sp|B7HCI3|MIAA_BACC4 tRNA dimethylallyltransferase OS=Bacillus cereus (strain B4264)
GN=miaA PE=3 SV=1
Length = 317
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 16/90 (17%)
Query: 3 LNLLHVAGQNWG-----RVDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYD 57
L + H+ G+ + ++ I + +L + RVD M++ GLL+EV
Sbjct: 170 LEIFHMTGEKMSDQIEKQEKELLYDVSLIGLTMDREMLYDRINLRVDLMMEQGLLEEVEG 229
Query: 58 IYNANADYTRGLR-----QAIGVREFEDFL 82
+YN RG+R QAIG +E D+
Sbjct: 230 LYN------RGIRDCQSIQAIGYKEIYDYF 253
>sp|Q73RN1|MIAA1_TREDE tRNA dimethylallyltransferase 1 OS=Treponema denticola (strain ATCC
35405 / CIP 103919 / DSM 14222) GN=miaA1 PE=3 SV=1
Length = 328
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 20 RFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGLRQAIGVREFE 79
++ + ++ +L +E+RVD M GL DEV +Y +AIG REF
Sbjct: 202 KYEFFILSIERTRSLLYERIEKRVDAMFAEGLYDEVKKLYEMGYTSESPGLKAIGYREFF 261
Query: 80 D 80
D
Sbjct: 262 D 262
>sp|A7NRZ0|MIAA_ROSCS tRNA dimethylallyltransferase OS=Roseiflexus castenholzii (strain
DSM 13941 / HLO8) GN=miaA PE=3 SV=1
Length = 306
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 17 DNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGLRQAIGVR 76
+R ++ + A PVL ++ RV+ M+ AGLLDEV + + +G R
Sbjct: 184 PPYRITTIWLTLPA--PVLYARIDARVEAMMAAGLLDEVRGLLERGYHWNLPSMSGLGYR 241
Query: 77 EFEDFL 82
EF +
Sbjct: 242 EFRPYF 247
>sp|A5UYJ2|MIAA_ROSS1 tRNA dimethylallyltransferase OS=Roseiflexus sp. (strain RS-1)
GN=miaA PE=3 SV=1
Length = 305
Score = 37.4 bits (85), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 16 VDNFRFNCCFICVDAANPVLDRYVEQRVDCMIDAGLLDEVYDIYNANADYTRGLRQAIGV 75
V ++ I + P L ++ RV+ MI AGLLDEV+ + + +G
Sbjct: 181 VQPPPYHTVTIWLTLPTPALYARIDARVEAMIAAGLLDEVHRLLERGYHWDLPSMSGLGY 240
Query: 76 REFEDFL 82
REF +
Sbjct: 241 REFRPYF 247
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,612,819
Number of Sequences: 539616
Number of extensions: 4088555
Number of successful extensions: 12251
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 12121
Number of HSP's gapped (non-prelim): 184
length of query: 292
length of database: 191,569,459
effective HSP length: 116
effective length of query: 176
effective length of database: 128,974,003
effective search space: 22699424528
effective search space used: 22699424528
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)