BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039021
(464 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 37/284 (13%)
Query: 121 DSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN 180
D ++++ +LN + G FG A+W G+ V ++ +H ++ ++
Sbjct: 28 DGDDMDIPWCDLNI--KEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREV 85
Query: 181 CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK---KVRLDLPTALRYALD 237
++ LRHPNI+ F+G++ + ++TEYL +G+L +L K + +LD L A D
Sbjct: 86 AIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYD 145
Query: 238 IAR--------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS 277
+A+ NLL D+ +K+ ++ + + + S
Sbjct: 146 VAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSK-SAAGTPE 204
Query: 278 SIASNVLDD----TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPK-FQISRC 332
+A VL D K D+ SFG I +++ + N + + +V F+ K +I R
Sbjct: 205 WMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN-PAQVVAAVGFKCKRLEIPRN 263
Query: 333 PN-RLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGRSALCP 375
N ++ +I C +P KRP+FA ++ L L +SA+ P
Sbjct: 264 LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRP----LIKSAVPP 303
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 129/291 (44%), Gaps = 37/291 (12%)
Query: 114 LTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKM 173
L + D ++++ +LN + G FG A+W G+ V ++ +H ++
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNI--KEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERV 78
Query: 174 VLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK---KVRLDLPT 230
++ ++ LRHPNI+ F+G++ + ++TEYL +G+L +L K + +LD
Sbjct: 79 NEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR 138
Query: 231 ALRYALDIAR--------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQEN 270
L A D+A+ NLL D+ +K+ ++ + +
Sbjct: 139 RLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKX 198
Query: 271 SQRNDNSSIASNVLDDT----KKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPK 326
+ +A VL D K D+ SFG I +++ + N + + +V F+ K
Sbjct: 199 AA-GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN-PAQVVAAVGFKCK 256
Query: 327 -FQISRCPN-RLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGRSALCP 375
+I R N ++ +I C +P KRP+FA ++ L L +SA+ P
Sbjct: 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRP----LIKSAVPP 303
>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266.
pdb|4GMR|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266
Length = 169
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L +G PN +D D +T LHLAA GH +V+LLL A+ N D RTPL AR +G+
Sbjct: 89 LLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNTSDSDGRTPLDLAREHGN 148
Query: 94 RDICRILEVNGG 105
++ ++LE GG
Sbjct: 149 EEVVKLLEKQGG 160
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L +G PN +D D +T LHLAA GH +V+LLL A+ N KD +TPL A GH
Sbjct: 56 LLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGH 115
Query: 94 RDICRILEVNGGKDFIHDQ----PLTVRNEKDSNEV 125
+++ ++L G D PL + E + EV
Sbjct: 116 KEVVKLLLSQGADPNTSDSDGRTPLDLAREHGNEEV 151
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 19 FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
+ A G++ + +L G N D D +T LHLAA GH +V+LLL A+ N KD
Sbjct: 8 LIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKD 67
Query: 79 RWQRTPLTDARLYGHRDICRILEVNG----GKDFIHDQPLTVRNEKDSNEV 125
+TPL A GH+++ ++L G KD PL + E EV
Sbjct: 68 SDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEV 118
>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267.
pdb|4HB5|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267
Length = 169
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L +G PN +D D RT LH AA GH IV+LLL A+ N D RTPL AR +G+
Sbjct: 89 LLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDLAREHGN 148
Query: 94 RDICRILEVNGG 105
+I ++LE GG
Sbjct: 149 EEIVKLLEKQGG 160
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 45/82 (54%)
Query: 19 FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
+ A G++ + +L G PN D D RT LH AA GH IV+LLL A+ N KD
Sbjct: 8 LIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKD 67
Query: 79 RWQRTPLTDARLYGHRDICRIL 100
RTPL A GH++I ++L
Sbjct: 68 SDGRTPLHYAAENGHKEIVKLL 89
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L +G PN +D D RT LH AA GH IV+LLL A+ N KD RTPL A GH
Sbjct: 56 LLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGH 115
Query: 94 RDICRILEVNGGKDFIHDQ----PLTVRNEKDSNEV 125
++I ++L G D PL + E + E+
Sbjct: 116 KEIVKLLLSKGADPNTSDSDGRTPLDLAREHGNEEI 151
>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265.
pdb|4HQD|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or265
Length = 169
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ +G N +D D RT LH AA EGH IV+LL+ A++N D RTPL AR +G+
Sbjct: 89 LISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNTSDSDGRTPLDLAREHGN 148
Query: 94 RDICRILEVNGG 105
+I ++LE GG
Sbjct: 149 EEIVKLLEKQGG 160
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%)
Query: 19 FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
+ A G++ + ++ G N D D RT LH AA EGH IV+LL+ A++N KD
Sbjct: 8 LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKD 67
Query: 79 RWQRTPLTDARLYGHRDICRIL 100
RTPL A GH++I ++L
Sbjct: 68 SDGRTPLHYAAKEGHKEIVKLL 89
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ +G N +D D RT LH AA EGH IV+LL+ A++N KD RTPL A GH
Sbjct: 56 LISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGH 115
Query: 94 RDICRIL 100
++I ++L
Sbjct: 116 KEIVKLL 122
>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex
Length = 169
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ G N +D +T LHLAA +GH IVE+LL++ A++N D+ TPL A LYGH
Sbjct: 33 LMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAALYGH 92
Query: 94 RDICRILEVNG 104
+I +L NG
Sbjct: 93 LEIVEVLLKNG 103
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D T LHLAA GH IVE+LL+Y A++N +D++ +T + G+
Sbjct: 99 LLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGN 158
Query: 94 RDICRILE 101
D+ IL+
Sbjct: 159 EDLAEILQ 166
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D T LHLAA GH IVE+LL+ A++N D + TPL A GH
Sbjct: 66 LLKHGADVNAADKMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGH 125
Query: 94 RDICRIL 100
+I +L
Sbjct: 126 LEIVEVL 132
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 55 AASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNG----GKDFIH 110
AA G V +L+ A++N +D +TPL A + GH +I +L +G D +
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMG 80
Query: 111 DQPL 114
D PL
Sbjct: 81 DTPL 84
>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And
Its Functional Consequences
pdb|3C5R|B Chain B, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And
Its Functional Consequences
Length = 137
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 19 FLSFAS-RGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
L AS +GD + +L+ G+ PNV+D+ T LH A + GH +VELLLQ+KA +N
Sbjct: 13 LLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTT 72
Query: 78 DRWQRTPLTDARLYGHRDICRIL 100
+PL DA GH DI ++L
Sbjct: 73 GYQNDSPLHDAAKNGHVDIVKLL 95
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 49 RTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
T LH+A+ +G P VE LLQ ++ N+KD TPL +A +GH + +L
Sbjct: 11 ETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELL 62
>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEH|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEH|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 157
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N +D D T LHLAA EGH IVE+LL+ A++N +D++ +TP A GH
Sbjct: 87 LLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIREGH 146
Query: 94 RDICRILE 101
DI +L+
Sbjct: 147 EDIAEVLQ 154
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N +D D T LHLAA EGH IVE+LL+ A++N KD+ TPL A GH
Sbjct: 54 LLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGH 113
Query: 94 RDICRIL 100
+I +L
Sbjct: 114 LEIVEVL 120
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 44/82 (53%)
Query: 19 FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L A G + ++ G N +D D T LHLAA EGH IVE+LL+ A++N KD
Sbjct: 6 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 79 RWQRTPLTDARLYGHRDICRIL 100
+ TPL A GH +I +L
Sbjct: 66 KDGYTPLHLAAREGHLEIVEVL 87
>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264.
pdb|4GPM|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or264
Length = 169
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ +G N +D D RT LH AA GH +V+LL+ A++N D RTPL AR +G+
Sbjct: 89 LISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGN 148
Query: 94 RDICRILEVNGG 105
++ ++LE GG
Sbjct: 149 EEVVKLLEKQGG 160
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 19 FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
+ A G++ + ++ G N D D RT LH AA GH +V+LL+ A++N KD
Sbjct: 8 LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKD 67
Query: 79 RWQRTPLTDARLYGHRDICRIL 100
RTPL A GH+++ ++L
Sbjct: 68 SDGRTPLHHAAENGHKEVVKLL 89
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ +G N +D D RT LH AA GH +V+LL+ A++N KD RTPL A GH
Sbjct: 56 LISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGH 115
Query: 94 RDICRIL 100
+++ ++L
Sbjct: 116 KEVVKLL 122
>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
pdb|4ATZ|E Chain E, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
pdb|4ATZ|F Chain F, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein
Length = 154
Score = 61.2 bits (147), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 43/72 (59%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+LR G N D + T LHLAAS GH IVE+LL+Y A++N KD TPL A +GH
Sbjct: 54 LLRNGADVNAVDTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGH 113
Query: 94 RDICRILEVNGG 105
+I +L +G
Sbjct: 114 LEIVEVLLKHGA 125
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A + D V + ++ G N D+ RT LH+AA+ GH IVE+LL+ A++N D
Sbjct: 12 AGQDDEVRI--LMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGT 69
Query: 83 TPLTDARLYGHRDICRIL 100
TPL A GH +I +L
Sbjct: 70 TPLHLAASLGHLEIVEVL 87
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
AS G + +L+ G N +D T L+LAA GH IVE+LL++ A++N +D++ +
Sbjct: 76 ASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGK 135
Query: 83 TPLTDARLYGHRDICRILE 101
T + G+ D+ IL+
Sbjct: 136 TAFDISIDIGNEDLAEILQ 154
Score = 33.5 bits (75), Expect = 0.26, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 25/51 (49%)
Query: 55 AASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGG 105
AA G V +L+ A+ N D + RTPL A GH +I +L NG
Sbjct: 9 AARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGA 59
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 28 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 82
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++TEY+ KG+L KG + K +RL + + + Y + A
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAA 142
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 143 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + + L T + + VN E Q+ R CP L L+ QC
Sbjct: 200 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 344 TNKDPSKRPTFAAVIITLEE 363
KDP +RPTF + LE+
Sbjct: 252 WRKDPEERPTFEYLQAFLED 271
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 28 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 82
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++TEY+ KG+L KG + K +RL + + + Y + A
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 143 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + + L T + + VN E Q+ R CP L L+ QC
Sbjct: 200 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 344 TNKDPSKRPTFAAVIITLEE 363
KDP +RPTF + LE+
Sbjct: 252 WRKDPEERPTFEYLQAFLED 271
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 195 QGCFGEV----WMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 249
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++TEY+ KG+L KG + K +RL + + + Y + A
Sbjct: 250 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 309
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 310 ANILVGENLVCKVADFGLGRL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 366
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + + L T + + VN E Q+ R CP L L+ QC
Sbjct: 367 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 418
Query: 344 TNKDPSKRPTFAAVIITLEE 363
KDP +RPTF + LE+
Sbjct: 419 WRKDPEERPTFEYLQAFLED 438
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 17 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 71
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++TEY+ KG+L KG + K +RL + + + Y + A
Sbjct: 72 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 131
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 132 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 188
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + L T + + VN E Q+ R CP L L+ QC
Sbjct: 189 SFGILL------TELTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 240
Query: 344 TNKDPSKRPTFAAVIITLEE 363
KDP +RPTF + LE+
Sbjct: 241 WRKDPEERPTFEYLQAFLED 260
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 19 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 73
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++TEY+ KG+L KG + K +RL + + + Y + A
Sbjct: 74 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 133
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 134 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 190
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + L T + + VN E Q+ R CP L L+ QC
Sbjct: 191 SFGILL------TELTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 242
Query: 344 TNKDPSKRPTFAAVIITLEE 363
KDP +RPTF + LE+
Sbjct: 243 WRKDPEERPTFEYLQAFLED 262
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 108/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ ++++RH ++Q L ++V
Sbjct: 28 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQ-LYAVV 82
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++TEY+ KG+L KG + K +RL + + + Y + A
Sbjct: 83 SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 143 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + + L T + + VN E Q+ R CP L L+ QC
Sbjct: 200 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 344 TNKDPSKRPTFAAVIITLEE 363
KDP +RPTF + LE+
Sbjct: 252 WRKDPEERPTFEYLQAFLED 271
>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four
Identical Consensus Repeats
Length = 126
Score = 60.1 bits (144), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 11/105 (10%)
Query: 20 LSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L A+R + + ++L E G N +D + RT LHLAA GH +V+LLL+ A++N KD
Sbjct: 6 LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65
Query: 79 RWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSN 123
+ RTPL A GH ++ ++L + G D N KD N
Sbjct: 66 KNGRTPLHLAARNGHLEVVKLL-LEAGADV---------NAKDKN 100
Score = 59.7 bits (143), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 20 LSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L A+R + + ++L E G N +D + RT LHLAA GH +V+LLL+ A++N KD
Sbjct: 39 LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 98
Query: 79 RWQRTPLTDARLYGHRDICRIL 100
+ RTPL A GH ++ ++L
Sbjct: 99 KNGRTPLHLAARNGHLEVVKLL 120
Score = 51.6 bits (122), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 10/75 (13%)
Query: 49 RTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDF 108
RT LHLAA GH +V+LLL+ A++N KD+ RTPL A GH ++ ++L + G D
Sbjct: 3 RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL-LEAGADV 61
Query: 109 IHDQPLTVRNEKDSN 123
N KD N
Sbjct: 62 ---------NAKDKN 67
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 20 LSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKA 72
L A+R + + ++L E G N +D + RT LHLAA GH +V+LLL+ A
Sbjct: 72 LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 28 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 82
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++TEY+ KG L KG + K +RL + + + Y + A
Sbjct: 83 SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 143 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + + L T + + VN E Q+ R CP L L+ QC
Sbjct: 200 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 344 TNKDPSKRPTFAAVIITLEE 363
KDP +RPTF + LE+
Sbjct: 252 WRKDPEERPTFEYLQAFLED 271
>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three
Identical Consensus Repeats
pdb|1N0Q|B Chain B, 3ank: A Designed Ankyrin Repeat Protein With Three
Identical Consensus Repeats
Length = 93
Score = 59.7 bits (143), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 20 LSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L A+R + + ++L E G N +D + RT LHLAA GH +V+LLL+ A++N KD
Sbjct: 6 LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65
Query: 79 RWQRTPLTDARLYGHRDICRIL 100
+ RTPL A GH ++ ++L
Sbjct: 66 KNGRTPLHLAARNGHLEVVKLL 87
Score = 51.6 bits (122), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 10/75 (13%)
Query: 49 RTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDF 108
RT LHLAA GH +V+LLL+ A++N KD+ RTPL A GH ++ ++L + G D
Sbjct: 3 RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL-LEAGADV 61
Query: 109 IHDQPLTVRNEKDSN 123
N KD N
Sbjct: 62 ---------NAKDKN 67
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 20 LSFASRGDRVGLNQMLRE-GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKA 72
L A+R + + ++L E G N +D + RT LHLAA GH +V+LLL+ A
Sbjct: 39 LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 28 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 82
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++ EY+ KG+L KG + K +RL + + + Y + A
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 143 ANILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + + L T + + VN E Q+ R CP L L+ QC
Sbjct: 200 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 344 TNKDPSKRPTFAAVIITLEE 363
KDP +RPTF + LE+
Sbjct: 252 WRKDPEERPTFEYLQAFLED 271
>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|D Chain D, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 157
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N +D D T LHLAA EGH IVE+LL+ A++N +D++ +TP A G+
Sbjct: 87 LLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIDNGN 146
Query: 94 RDICRILE 101
DI +L+
Sbjct: 147 EDIAEVLQ 154
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N +D D T LHLAA EGH IVE+LL+ A++N KD+ TPL A GH
Sbjct: 54 LLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGH 113
Query: 94 RDICRIL 100
+I +L
Sbjct: 114 LEIVEVL 120
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 44/82 (53%)
Query: 19 FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L A G + ++ G N +D D T LHLAA EGH IVE+LL+ A++N KD
Sbjct: 6 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 79 RWQRTPLTDARLYGHRDICRIL 100
+ TPL A GH +I +L
Sbjct: 66 KDGYTPLHLAAREGHLEIVEVL 87
>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin
Length = 166
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 41/67 (61%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N +D D T LHLAA EGH IVE+LL+ A++N KD+ TPL A GH
Sbjct: 66 LLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGH 125
Query: 94 RDICRIL 100
+I +L
Sbjct: 126 LEIVEVL 132
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ G N +D D T LHLAA EGH IVE+LL+ A++N KD+ TPL A GH
Sbjct: 33 LMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGH 92
Query: 94 RDICRIL 100
+I +L
Sbjct: 93 LEIVEVL 99
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N +D D T LHLAA EGH IVE+LL+ A++N +D++ +T + G+
Sbjct: 99 LLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGN 158
Query: 94 RDICRILE 101
D+ IL+
Sbjct: 159 EDLAEILQ 166
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 55 AASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
AA G V +L+ A++N KD+ TPL A GH +I +L
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVL 66
>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 169
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N +D D T LHLAA GH IVE+LL+Y A++N +D + TPL A GH
Sbjct: 66 LLKHGADVNARDTDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGH 125
Query: 94 RDICRILEVNG 104
+I +L +G
Sbjct: 126 LEIVEVLLKHG 136
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N QD T LHLAA GH IVE+LL++ A++N +D++ +T + G+
Sbjct: 99 LLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGN 158
Query: 94 RDICRILE 101
D+ IL+
Sbjct: 159 EDLAEILQ 166
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%)
Query: 19 FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L A G + ++ G N D T LHLAA GH IVE+LL++ A++N +D
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARD 77
Query: 79 RWQRTPLTDARLYGHRDICRIL 100
TPL A GH +I +L
Sbjct: 78 TDGWTPLHLAADNGHLEIVEVL 99
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 277 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 331
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++TEY+ KG+L KG K +RL + + + Y + A
Sbjct: 332 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 391
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 392 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + + L T + + VN E Q+ R CP L L+ QC
Sbjct: 449 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 500
Query: 344 TNKDPSKRPTFAAVIITLEE 363
K+P +RPTF + LE+
Sbjct: 501 WRKEPEERPTFEYLQAFLED 520
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 28 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 82
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++ EY+ KG+L KG + K +RL + + + Y + A
Sbjct: 83 SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 143 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + + L T + + VN E Q+ R CP L L+ QC
Sbjct: 200 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 344 TNKDPSKRPTFAAVIITLEE 363
KDP +RPTF + LE+
Sbjct: 252 WRKDPEERPTFEYLQAFLED 271
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 28 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 82
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++ EY+ KG+L KG + K +RL + + + Y + A
Sbjct: 83 SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 143 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + + L T + + VN E Q+ R CP L L+ QC
Sbjct: 200 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 344 TNKDPSKRPTFAAVIITLEE 363
KDP +RPTF + LE+
Sbjct: 252 WRKDPEERPTFEYLQAFLED 271
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 18 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 72
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++TEY+ KG+L KG K +RL + + + Y + A
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 132
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 133 ANILVGENLVCKVADFGLARL---IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVW 189
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + + L T + + VN E Q+ R CP L L+ QC
Sbjct: 190 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 241
Query: 344 TNKDPSKRPTFAAVIITLEE 363
K+P +RPTF + LE+
Sbjct: 242 WRKEPEERPTFEYLQAFLED 261
>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r
pdb|2Y0B|H Chain H, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r
Length = 136
Score = 58.5 bits (140), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A + D V + ++ G N D T LHLAA GH IVE+LL++ A++N +D W R
Sbjct: 24 AGQDDEVRI--LMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGR 81
Query: 83 TPLTDARLYGHRDICRIL 100
TPL A GH +I +L
Sbjct: 82 TPLHLAATVGHLEIVEVL 99
Score = 57.0 bits (136), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A RG + +L+ G N +D RT LHLAA+ GH IVE+LL+Y A++N +D++ +
Sbjct: 55 AKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGK 114
Query: 83 TPLTDARLYGHRDICRILE 101
T + G+ D+ IL+
Sbjct: 115 TAFDISIDNGNEDLAEILQ 133
>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s
pdb|2XZT|H Chain H, Caspase-3 In Complex With Darpin-3.4_i78s
Length = 136
Score = 58.5 bits (140), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A + D V + ++ G N D T LHLAA GH IVE+LL++ A++N D W R
Sbjct: 24 AGQDDEVRI--LMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGR 81
Query: 83 TPLTDARLYGHRDICRIL 100
TPL A GH +I +L
Sbjct: 82 TPLHLAATVGHLEIVEVL 99
Score = 56.6 bits (135), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A RG + +L+ G N D RT LHLAA+ GH IVE+LL+Y A++N +D++ +
Sbjct: 55 AKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGK 114
Query: 83 TPLTDARLYGHRDICRILE 101
T + G+ D+ IL+
Sbjct: 115 TAFDISIDNGNEDLAEILQ 133
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 194 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 248
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++TEY+ KG+L KG K +RL + + + Y + A
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 308
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 309 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + + L T + + VN E Q+ R CP L L+ QC
Sbjct: 366 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 417
Query: 344 TNKDPSKRPTFAAVIITLEE 363
K+P +RPTF + LE+
Sbjct: 418 WRKEPEERPTFEYLQAFLED 437
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 194 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 248
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++TEY+ KG+L KG K +RL + + + Y + A
Sbjct: 249 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 308
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 309 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + + L T + + VN E Q+ R CP L L+ QC
Sbjct: 366 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 417
Query: 344 TNKDPSKRPTFAAVIITLEE 363
K+P +RPTF + LE+
Sbjct: 418 WRKEPEERPTFEYLQAFLED 437
>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex)
Length = 169
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D T LHLAA GH IVE+LL++ A++N D W TPL A + GH
Sbjct: 66 LLKHGADVNAIDIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGH 125
Query: 94 RDICRIL 100
+I +L
Sbjct: 126 LEIVEVL 132
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ G N D T LHLAA+ GH IVE+LL++ A++N D TPL A L GH
Sbjct: 33 LMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXGSTPLHLAALIGH 92
Query: 94 RDICRIL 100
+I +L
Sbjct: 93 LEIVEVL 99
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D T LHLAA GH IVE+LL++ A++N +D++ +T + G+
Sbjct: 99 LLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGN 158
Query: 94 RDICRILE 101
D+ IL+
Sbjct: 159 EDLAEILQ 166
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 55 AASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
AA G V +L+ A++N D TPL A YGH +I +L
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVL 66
>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|Q Chain Q, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|R Chain R, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|S Chain S, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|T Chain T, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
pdb|2P2C|U Chain U, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat
Protein (Darpin)
Length = 169
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N +DY+ T LHLAA +GH IVE+LL+Y A++N +D++ +T + G+
Sbjct: 99 LLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGN 158
Query: 94 RDICRILE 101
D+ IL+
Sbjct: 159 EDLAEILQ 166
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ G N D+ T LHLAA GH IVE+LL+Y A++N D + TPL A GH
Sbjct: 33 LMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLAADNGH 92
Query: 94 RDICRIL 100
+I +L
Sbjct: 93 LEIVEVL 99
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D T LHLAA GH IVE+LL++ A++N KD TPL A GH
Sbjct: 66 LLKYGADVNAWDNYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGH 125
Query: 94 RDICRIL 100
+I +L
Sbjct: 126 LEIVEVL 132
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 100/243 (41%), Gaps = 36/243 (14%)
Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGE 202
G +GE W+ + + +K+ +++ K+ ++E++HPN++Q LG L
Sbjct: 43 GQYGEVYVGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEP 101
Query: 203 EMILITEYLPKGNLKGIL--------SKKVRLDLPTALRYALDI------------ARNL 242
++TEY+P GNL L + V L + T + A++ ARN
Sbjct: 102 PFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 161
Query: 243 LQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYI 297
L E +K+ ++ + Y + + S+A N K D+ +FG +
Sbjct: 162 LVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTF-SIKSDVWAFGVL 220
Query: 298 F-----YQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP 352
Y M + + +D + K E Q CP ++ +L+ C P+ RP
Sbjct: 221 LWEIATYGMSPYPGIDLSQVYDLLE-KGYRME---QPEGCPPKVYELMRACWKWSPADRP 276
Query: 353 TFA 355
+FA
Sbjct: 277 SFA 279
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 21 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 75
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++TEY+ KG+L KG K +RL + + + Y + A
Sbjct: 76 SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 135
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 136 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 192
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + L T + + VN E Q+ R CP L L+ QC
Sbjct: 193 SFGILL------TELTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 244
Query: 344 TNKDPSKRPTFAAVIITLEE 363
K+P +RPTF + LE+
Sbjct: 245 WRKEPEERPTFEYLQAFLED 264
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 28 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 82
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++ EY+ KG L KG + K +RL + + + Y + A
Sbjct: 83 SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 142
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 143 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 199
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + + L T + + VN E Q+ R CP L L+ QC
Sbjct: 200 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 251
Query: 344 TNKDPSKRPTFAAVIITLEE 363
KDP +RPTF + LE+
Sbjct: 252 WRKDPEERPTFEYLQAFLED 271
>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4
pdb|2XZD|H Chain H, Caspase-3 In Complex With An Inhibitory Darpin-3.4
Length = 136
Score = 57.8 bits (138), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A + D V + ++ G N D T LHLAA GH IVE+LL++ A++N D W R
Sbjct: 24 AGQDDEVRI--LMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGR 81
Query: 83 TPLTDARLYGHRDICRIL 100
TPL A GH +I +L
Sbjct: 82 TPLHLAATVGHLEIVEVL 99
Score = 56.6 bits (135), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A RG + +L+ G N D RT LHLAA+ GH IVE+LL+Y A++N +D++ +
Sbjct: 55 AKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGK 114
Query: 83 TPLTDARLYGHRDICRILE 101
T + G+ D+ IL+
Sbjct: 115 TAFDISIDNGNEDLAEILQ 133
>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4
pdb|2Y1L|F Chain F, Caspase-8 In Complex With Darpin-8.4
Length = 169
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A R D V + ++ G N +D T LHLAA GH IVE+LL+ A++N D
Sbjct: 24 AGRDDEVRI--LMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGM 81
Query: 83 TPLTDARLYGHRDICRILEVNG 104
TPL A L+GH +I +L NG
Sbjct: 82 TPLRLAALFGHLEIVEVLLKNG 103
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D+ T L LAA GH IVE+LL+ A++N D TPL A ++GH
Sbjct: 66 LLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGH 125
Query: 94 RDICRILEVNG 104
+I +L NG
Sbjct: 126 LEIVEVLLKNG 136
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D + T LHLAA GH IVE+LL+ A++N +D++ +T + G+
Sbjct: 99 LLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGN 158
Query: 94 RDICRILE 101
D+ IL+
Sbjct: 159 EDLAEILQ 166
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 55 AASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNG 104
AA G V +L+ A++N +D TPL A GH +I +L NG
Sbjct: 21 AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNG 70
>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin
pdb|4DRX|F Chain F, Gtp-Tubulin In Complex With A Darpin
Length = 169
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D T LHLAA GH IVE+LL++ A++N D W TPL A + GH
Sbjct: 66 LLKHGADVNAIDIMGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGH 125
Query: 94 RDICRIL 100
+I +L
Sbjct: 126 LEIVEVL 132
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ G N D T LHLAA+ GH IVE+LL++ A++N D TPL A L GH
Sbjct: 33 LMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMGSTPLHLAALIGH 92
Query: 94 RDICRIL 100
+I +L
Sbjct: 93 LEIVEVL 99
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D T LHLAA GH IVE+LL++ A++N +D++ +T + G+
Sbjct: 99 LLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGN 158
Query: 94 RDICRILE 101
D+ IL+
Sbjct: 159 EDLAEILQ 166
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 55 AASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
AA G V +L+ A++N D TPL A YGH +I +L
Sbjct: 21 AARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVL 66
>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA
Length = 153
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+LR G S + + RT LH+AASEGHA IVE+LL++ A++N KD + T L A + H
Sbjct: 53 LLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNH 112
Query: 94 RDICRILEVNGGKDFIHDQ 112
+++ +L + G D +H Q
Sbjct: 113 QEVVELL-IKYGAD-VHTQ 129
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
AS G + +L+ G N +D K TALH A H +VELL++Y A+++ + ++ +
Sbjct: 75 ASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCK 134
Query: 83 TPLTDARLYGHRDICRILE 101
T + G+ D+ IL+
Sbjct: 135 TAFDISIDNGNEDLAEILQ 153
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 16 IGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLN 75
+G L A+R + ++L +P D+ + LHLAA GH E+LL+ + +
Sbjct: 2 LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD 61
Query: 76 LKDRWQRTPLTDARLYGHRDICRILEVNG----GKDFIHDQPLTVRNEKDSNEV 125
+ + RTPL A GH +I +L +G KD + L E + EV
Sbjct: 62 ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEV 115
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 25 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 79
Query: 200 LGEEMILITEYLPKGN----LKGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++TEY+ KG+ LKG K +RL + + + Y + A
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRA 139
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 140 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + L T + + VN E Q+ R CP L L+ QC
Sbjct: 197 SFGILL------TELTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 248
Query: 344 TNKDPSKRPTFAAVIITLEE 363
K+P +RPTF + LE+
Sbjct: 249 WRKEPEERPTFEYLQAFLED 268
>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph
(3')-Iiia In Complex With The Inhibitor Ar_3a
pdb|2BKK|D Chain D, Crystal Structure Of Aminoglycoside Phosphotransferase Aph
(3')-Iiia In Complex With The Inhibitor Ar_3a
Length = 169
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A RG + +L+ G N DY T LHLAA +GH IVE+LL+Y A++N +D++ +
Sbjct: 88 AYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGK 147
Query: 83 TPLTDARLYGHRDICRILE 101
T + G+ D+ IL+
Sbjct: 148 TAFDISIDNGNEDLAEILQ 166
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ G N D+ T LHL + GH I+E+LL+Y A++N D+ TPL A GH
Sbjct: 33 LMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAYRGH 92
Query: 94 RDICRIL 100
+I +L
Sbjct: 93 LEIVEVL 99
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 36/67 (53%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ N D T LHLAA GH IVE+LL+Y A++N D TPL A GH
Sbjct: 66 LLKYAADVNASDKSGWTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGH 125
Query: 94 RDICRIL 100
+I +L
Sbjct: 126 LEIVEVL 132
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 25 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 79
Query: 200 LGEEMILITEYLPKGN----LKGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++TEY+ KG+ LKG K +RL + + + Y + A
Sbjct: 80 SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRA 139
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 140 ANILVGENLVCKVADFGLARL---IEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVW 196
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + L T + + VN E Q+ R CP L L+ QC
Sbjct: 197 SFGILL------TELTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 248
Query: 344 TNKDPSKRPTFAAVIITLEE 363
K+P +RPTF + LE+
Sbjct: 249 WRKEPEERPTFEYLQAFLED 268
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 118/277 (42%), Gaps = 49/277 (17%)
Query: 121 DSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN 180
D ++NF +++LN HS GE +W+G +V V+K + K ++
Sbjct: 8 DFKQLNF-LTKLNENHS--------GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEEC 58
Query: 181 CKLRELRHPNILQFLGSI--VLGEEMILITEYLPKGNLKGILSKKVR--LDLPTALRYAL 236
+LR HPN+L LG+ LIT ++P G+L +L + +D A+++AL
Sbjct: 59 PRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFAL 118
Query: 237 DIARNL--------------------LQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDN 276
D+AR + + DE +I V+ + Q +
Sbjct: 119 DMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF------QSPGRMYAP 172
Query: 277 SSIASNVL----DDTKK---DICSFGYIFYQML--EGKHLQTNNSFDFMHLKSVNFEPKF 327
+ +A L +DT + D+ SF + ++++ E +N M + P
Sbjct: 173 AWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTI 232
Query: 328 QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
P+ + +L+ C N+DP+KRP F ++ LE++
Sbjct: 233 PPGISPH-VSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 39/283 (13%)
Query: 120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKD 179
+DS++ +++I + + G FG KW G VK + ++ P L A
Sbjct: 1 RDSSD-DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFK 56
Query: 180 N--CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYAL 236
N LR+ RH NIL F+G ++ ++T++ +L L + + + ++ + A
Sbjct: 57 NEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR 115
Query: 237 DIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS- 277
AR N+ E + +KIG++ + + + + Q + +
Sbjct: 116 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 175
Query: 278 SIASNV--LDDT-----KKDICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSV-NFEPKF 327
+A V + D+ + D+ +FG + Y+++ G+ + NN + + + P
Sbjct: 176 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL 235
Query: 328 QISR--CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
R CP R+K+L+A+C K +RP+F ++ +EE++ L
Sbjct: 236 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAREL 278
>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat
Protein
pdb|2BKG|B Chain B, Crystal Structure Of E3_19 An Designed Ankyrin Repeat
Protein
Length = 166
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D+ T LHLAA GH IVE+LL+Y A++N D TPL A GH
Sbjct: 66 LLKNGADVNALDFSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGH 125
Query: 94 RDICRIL 100
+I +L
Sbjct: 126 LEIVEVL 132
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A RG + +L+ G N D T LHLAA GH IVE+LL+Y A++N +D++ +
Sbjct: 88 AKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGK 147
Query: 83 TPLTDARLYGHRDICRILE 101
T + G+ D+ IL+
Sbjct: 148 TAFDISIDNGNEDLAEILQ 166
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ G N +D T LHLAA GH IVE+LL+ A++N D TPL A GH
Sbjct: 33 LMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAKRGH 92
Query: 94 RDICRIL 100
+I +L
Sbjct: 93 LEIVEVL 99
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 55 AASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGK----DFIH 110
AA G V +L+ A++N +D + TPL A GH +I +L NG DF
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSG 80
Query: 111 DQPL 114
PL
Sbjct: 81 STPL 84
>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|D Chain D, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 136
Score = 57.0 bits (136), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 42/72 (58%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ G N D D T LHLAA GH IVE+LL+Y A++N +D + TPL A + GH
Sbjct: 33 LMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAIRGH 92
Query: 94 RDICRILEVNGG 105
+I +L +G
Sbjct: 93 LEIVEVLLKHGA 104
Score = 48.5 bits (114), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N +D T LHLAA GH IVE+LL++ A++N +D++ +T + G+
Sbjct: 66 LLKYGADVNAEDNFGITPLHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGN 125
Query: 94 RDICRILE 101
D+ IL+
Sbjct: 126 EDLAEILQ 133
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 114/260 (43%), Gaps = 38/260 (14%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGS 197
+ G FG KW G VK + ++ P L A N LR+ RH NIL F+G
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 87
Query: 198 IVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDIAR---------------- 240
++ ++T++ +L L + + + ++ + A AR
Sbjct: 88 YSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLK 147
Query: 241 --NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS-SIASNV--LDDT-----KKD 290
N+ E + +KIG++ + + + + Q + + +A V + D+ + D
Sbjct: 148 SNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSD 207
Query: 291 ICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSV-NFEPKFQISR--CPNRLKQLIAQCTN 345
+ +FG + Y+++ G+ + NN + + + P R CP R+K+L+A+C
Sbjct: 208 VYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLK 267
Query: 346 KDPSKRPTFAAVIITLEEVS 365
K +RP+F ++ +EE++
Sbjct: 268 KKRDERPSFPRILAEIEELA 287
>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein
Length = 166
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D T LHLAA+ GH IVE+LL++ A++N D TPL A YGH
Sbjct: 66 LLKNGADVNASDLTGITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGH 125
Query: 94 RDICRIL 100
+I +L
Sbjct: 126 LEIVEVL 132
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D D T LHLAA GH IVE+LL++ A++N +D++ +T + G+
Sbjct: 99 LLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGN 158
Query: 94 RDICRILE 101
D+ IL+
Sbjct: 159 EDLAEILQ 166
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 37/67 (55%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ G N D D T LHLAAS GH IVE+LL+ A++N D TPL A GH
Sbjct: 33 LMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAATGH 92
Query: 94 RDICRIL 100
+I +L
Sbjct: 93 LEIVEVL 99
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 125/283 (44%), Gaps = 39/283 (13%)
Query: 120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKD 179
+DS++ +++I + + G FG KW G VK + ++ P L A
Sbjct: 13 RDSSD-DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFK 68
Query: 180 N--CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYAL 236
N LR+ RH NIL F+G ++ ++T++ +L L + + + ++ + A
Sbjct: 69 NEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR 127
Query: 237 DIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS- 277
AR N+ E + +KIG++ + + + + Q + +
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 278 SIASNV--LDDT-----KKDICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSV-NFEPKF 327
+A V + D+ + D+ +FG + Y+++ G+ + NN + + + P
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL 247
Query: 328 QISR--CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
R CP R+K+L+A+C K +RP+F ++ +EE++ L
Sbjct: 248 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAREL 290
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 106/260 (40%), Gaps = 54/260 (20%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIV 199
QG FGE W GTW T + P M A ++ +++LRH ++Q L ++V
Sbjct: 194 QGCFGEV----WMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQ-LYAVV 248
Query: 200 LGEEMILITEYLPKGNL----KGILSKKVRL--------DLPTALRYALDI--------A 239
E + ++ EY+ KG+L KG K +RL + + + Y + A
Sbjct: 249 SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRA 308
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDIC 292
N+L E K+ ++ + I N+ +++ I + K D+
Sbjct: 309 ANILVGENLVCKVADFGLARL---IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 365
Query: 293 SFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---------CPNRLKQLIAQC 343
SFG + + L T + + VN E Q+ R CP L L+ QC
Sbjct: 366 SFGILLTE------LTTKGRVPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQC 417
Query: 344 TNKDPSKRPTFAAVIITLEE 363
K+P +RPTF + LE+
Sbjct: 418 WRKEPEERPTFEYLQAFLED 437
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 111/277 (40%), Gaps = 42/277 (15%)
Query: 133 NTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNIL 192
+ +H ++ +G FG++ R T V + + + K+ +R L HPN+L
Sbjct: 11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVL 70
Query: 193 QFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALR--YALDIA----------- 239
+F+G + + + ITEY+ G L+GI+ K + P + R +A DIA
Sbjct: 71 KFIGVLYKDKRLNFITEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHSMNI 129
Query: 240 -------RNLLQDEGDHLKIGEYWVQ--MFYEQIHPNQENSQRNDNSSIASNVLD----- 285
N L E ++ + ++ + M E+ P S + + V+
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 286 ----------DTKKDICSFGYIFYQMLEGKHLQTN---NSFDFMHLKSVNFEPKFQISRC 332
D K D+ SFG + +++ + + + DF L F ++ C
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-GLNVRGFLDRYCPPNC 248
Query: 333 PNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLG 369
P + +C + DP KRP+F + LE + L
Sbjct: 249 PPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 122/284 (42%), Gaps = 35/284 (12%)
Query: 117 RNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLS 176
R ++DS+ ++I + S+ + G FG KW G VK ++K P +
Sbjct: 22 RGQRDSS-YYWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVK-ILKVVDPTPEQFQAF 79
Query: 177 AKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNL-KGILSKKVRLDLPTALRYA 235
+ LR+ RH NIL F+G + + + ++T++ +L K + ++ + + + A
Sbjct: 80 RNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIA 138
Query: 236 LDIAR------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS 277
A+ N+ EG +KIG++ + + +Q+ Q +
Sbjct: 139 RQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSV 198
Query: 278 -SIASNVLD-------DTKKDICSFGYIFYQMLEGK----HLQTNNSFDFMHLKSVNFEP 325
+A V+ + D+ S+G + Y+++ G+ H+ + FM +
Sbjct: 199 LWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD 258
Query: 326 KFQISR-CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
++ + CP +K+L+A C K +RP F ++ ++E + L
Sbjct: 259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302
>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker
Length = 437
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G SPNV + T LH+AA GH + + LLQ KA +N K + +TPL A GH
Sbjct: 33 LLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGH 92
Query: 94 RDICRIL 100
++ ++L
Sbjct: 93 TNMVKLL 99
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 20 LSFASRGDRVGLNQ-MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L A++ ++V + + +L+ G S N + T LHLAA EGHA +V LLL +AN NL +
Sbjct: 216 LHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGN 275
Query: 79 RWQRTPLTDARLYGHRDICRILEVNG 104
+ TPL GH + +L +G
Sbjct: 276 KSGLTPLHLVAQEGHVPVADVLIKHG 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 50 TALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGG 105
T LH+A+ G+ +V+ LLQ++A++N K + +PL A GH DI +L NG
Sbjct: 313 TPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGA 368
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 20 LSFASRGDRVGLNQ-MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L A+R + + +L+ N + D +T LH AA GH +V+LLL+ AN NL
Sbjct: 51 LHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLAT 110
Query: 79 RWQRTPLTDARLYGHRD-ICRILE 101
TPL A GH + + +LE
Sbjct: 111 TAGHTPLHIAAREGHVETVLALLE 134
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L + + N+ + T LHL A EGH P+ ++L+++ ++ R TPL A YG+
Sbjct: 264 LLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGN 323
Query: 94 RDICRIL 100
+ + L
Sbjct: 324 IKLVKFL 330
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 50 TALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGK 106
T LH+A+ GH PIV+ LLQ A+ N+ + TPL A GH ++ + L N K
Sbjct: 16 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAK 72
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L G SP+ ++ T LH+AA + + LLQY + N + TPL A GH
Sbjct: 198 LLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGH 257
Query: 94 RDICRIL 100
++ +L
Sbjct: 258 AEMVALL 264
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L +PN+ T LH+AA EGH V LL+ +A+ + TPL A YG
Sbjct: 99 LLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGK 158
Query: 94 RDICRIL 100
+ +L
Sbjct: 159 VRVAELL 165
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 50 TALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGG 105
T LH+AA G + ELLL+ A+ N + TPL A + + DI ++L GG
Sbjct: 148 TPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGG 203
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 52 LHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEV 102
LH AA +GH IV LLL+ A+ N TPL A+ G+ + +L+V
Sbjct: 348 LHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKV 398
>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure
Length = 115
Score = 55.8 bits (133), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A G + ++L +G N + D T LHLAA GHA IV+LLL A++N + +
Sbjct: 17 AKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGN 76
Query: 83 TPLTDARLYGHRDICRILEVNGG 105
TP A+ GH +I ++L+ G
Sbjct: 77 TPEHLAKKNGHHEIVKLLDAKGA 99
Score = 39.7 bits (91), Expect = 0.004, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 47 DKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGG 105
D T LH AA GHA V+ LL A++N + + TPL A GH +I ++L G
Sbjct: 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA 66
Score = 30.4 bits (67), Expect = 2.2, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
+L +G N + D T HLA GH IV+LL A++N +
Sbjct: 61 LLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNAR 104
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 112/268 (41%), Gaps = 35/268 (13%)
Query: 121 DSNEVNFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA 177
D + N+D E+ +M + G +GE W+ + + +K+ +++
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFL 62
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--------SKKVRLDLP 229
K+ ++E++HPN++Q LG +ITE++ GNL L S V L +
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA 122
Query: 230 TALRYALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQ 272
T + A++ ARN L E +K+ ++ + Y + +
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR- 331
S+A N K D+ +FG + ++ + + D + + E +++ R
Sbjct: 183 WTAPESLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERP 239
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAV 357
CP ++ +L+ C +PS RP+FA +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 101/227 (44%), Gaps = 41/227 (18%)
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMI-LITEYLPKGNLKGILSKKVR----------- 225
++ +R L HPN+L +G ++ E + ++ Y+ G+L + R
Sbjct: 71 REGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFG 130
Query: 226 LDLPTALRYALD--------IARNLLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRND 275
L + + Y + ARN + DE +K+ ++ + + + + Q++ R+
Sbjct: 131 LQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQH--RHA 188
Query: 276 NSSIASNVLDD-------TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNF--- 323
+ L+ TK D+ SFG + +++L + + FD H +
Sbjct: 189 RLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP 248
Query: 324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE-VSACLG 369
+P++ CP+ L Q++ QC DP+ RPTF ++ +E+ VSA LG
Sbjct: 249 QPEY----CPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
N+D E+ +M + G +GE W+ + + +K+ +++ K+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--------SKKVRLDLPTALRY 234
++E++HPN++Q LG +ITE++ GNL L S V L + T +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
A++ ARN L E +K+ ++ + Y + +
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
S+A N K D+ +FG + ++ + + D + + E +++ R CP
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 239
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
++ +L+ C +PS RP+FA +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEI 262
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
N+D E+ +M + G +GE W+ + + +K+ +++ K+
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 269
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--------SKKVRLDLPTALRY 234
++E++HPN++Q LG +ITE++ GNL L S V L + T +
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
A++ ARN L E +K+ ++ + Y + +
Sbjct: 330 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 389
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
S+A N K D+ +FG + ++ + + D + + E +++ R CP
Sbjct: 390 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 446
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
++ +L+ C +PS RP+FA +
Sbjct: 447 KVYELMRACWQWNPSDRPSFAEI 469
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
N+D E+ +M + G +GE W+ + + +K+ +++ K+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--------SKKVRLDLPTALRY 234
++E++HPN++Q LG +ITE++ GNL L S V L + T +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
A++ ARN L E +K+ ++ + Y + +
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
S+A N K D+ +FG + ++ + + D + + E +++ R CP
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 239
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
++ +L+ C +PS RP+FA +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEI 262
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 58/275 (21%)
Query: 127 FDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL 186
++ EL L + + +G FG+ +RG V IK+ + + + +L
Sbjct: 190 LNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLA----EASVMTQL 243
Query: 187 RHPNILQFLGSIVLGEE---MILITEYLPKGNLKGILSKKVR--LDLPTALRYALDI--- 238
RH N++Q LG IV EE + ++TEY+ KG+L L + R L L+++LD+
Sbjct: 244 RHSNLVQLLGVIV--EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 301
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI---- 279
ARN+L E + K+ ++ + +E S D +
Sbjct: 302 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL---------TKEASSTQDTGKLPVKW 352
Query: 280 -ASNVLDD----TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV--NFEPKFQISR- 331
A L + TK D+ SFG + +++ + + + LK V E +++
Sbjct: 353 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRV----PYPRIPLKDVVPRVEKGYKMDAP 408
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP + ++ C + D + RPTF + LE +
Sbjct: 409 DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHI 443
>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By
Darpin Inhibitors
pdb|2J8S|E Chain E, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By
Darpin Inhibitors
pdb|4DX5|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX5|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX6|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX6|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX7|D Chain D, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
pdb|4DX7|E Chain E, Transport Of Drugs By The Multidrug Transporter Acrb
Involves An Access And A Deep Binding Pocket That Are
Separated By A Switch-Loop
Length = 169
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N +D + T LHLAA+ GH IVE+LL+Y A++N +D++ +T + G+
Sbjct: 99 LLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVNAQDKFGKTAFDISINNGN 158
Query: 94 RDICRILE 101
D+ IL+
Sbjct: 159 EDLAEILQ 166
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A R D V + ++ G N D T LHLAA GH IVE+LL+ A++N D
Sbjct: 24 AGRDDEVRI--LMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLGS 81
Query: 83 TPLTDARLYGHRDICRILEVNG 104
TPL A +GH +I +L NG
Sbjct: 82 TPLHLAAHFGHLEIVEVLLKNG 103
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 37/67 (55%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D T LHLAA GH IVE+LL+ A++N KD TPL A GH
Sbjct: 66 LLKNGADVNAYDTLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGH 125
Query: 94 RDICRIL 100
+I +L
Sbjct: 126 LEIVEVL 132
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 55 AASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNG 104
AA G V +L+ A++N D TPL A +GH +I +L NG
Sbjct: 21 AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNG 70
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 35/268 (13%)
Query: 121 DSNEVNFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA 177
D + N+D E+ +M + G +GE W+ + + +K+ +++
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFL 62
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLP 229
K+ ++E++HPN++Q LG +ITE++ GNL L + V L +
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 230 TALRYALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQ 272
T + A++ ARN L E +K+ ++ + Y + +
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR- 331
S+A N K D+ +FG + ++ + + D + + E +++ R
Sbjct: 183 WTAPESLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERP 239
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAV 357
CP ++ +L+ C +PS RP+FA +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9U|D Chain D, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9N|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
pdb|3Q9N|D Chain D, In Silico And In Vitro Co-Evolution Of A High Affinity
Complementary Protein-Protein Interface
Length = 158
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D T LHLAA +GH IVE+LL++ A++N DR TPL A L G
Sbjct: 58 LLKNGADVNASDSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQ 117
Query: 94 RDICRIL 100
+I +L
Sbjct: 118 LEIVEVL 124
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%)
Query: 19 FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L A+ G + ++ G N D + T LHLAA+ G IVE+LL+ A++N D
Sbjct: 10 LLEAAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASD 69
Query: 79 RWQRTPLTDARLYGHRDICRIL 100
TPL A GH +I +L
Sbjct: 70 SAGITPLHLAAYDGHLEIVEVL 91
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D T LHLAA G IVE+LL++ A++N +D T + G
Sbjct: 91 LLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTAFDISINQGQ 150
Query: 94 RDICRILE 101
D+ IL+
Sbjct: 151 EDLAEILQ 158
>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
pdb|3NOC|E Chain E, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
Length = 169
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ G N +D+ T LHLAA GH IVE+LL+ A++N KD TPL A GH
Sbjct: 33 LMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLGVTPLHLAARRGH 92
Query: 94 RDICRILEVNG 104
+I +L NG
Sbjct: 93 LEIVEVLLKNG 103
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 39/71 (54%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N +D T LHLAA GH IVE+LL+ A++N D TPL A GH
Sbjct: 66 LLKNGADVNAKDSLGVTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGH 125
Query: 94 RDICRILEVNG 104
+I +L NG
Sbjct: 126 LEIVEVLLKNG 136
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A RG + +L+ G N D T LHLAA GH IVE+LL+ A++N +D++ +
Sbjct: 88 ARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVNAQDKFGK 147
Query: 83 TPLTDARLYGHRDICRILE 101
T + G+ D+ IL+
Sbjct: 148 TAFDISIDNGNEDLAEILQ 166
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 55 AASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNG----GKDFIH 110
AA G V +L+ A++N +D TPL A +GH +I +L NG KD +
Sbjct: 21 AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLG 80
Query: 111 DQPL 114
PL
Sbjct: 81 VTPL 84
>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
pdb|3NOG|E Chain E, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb:
Plasticity Of The Interface
Length = 169
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A RG + +L+ G N D++ T LHLAA+ GH IVE+LL++ A++N +D++ +
Sbjct: 88 ADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGK 147
Query: 83 TPLTDARLYGHRDICRILE 101
T + G+ D+ IL+
Sbjct: 148 TAFDISIDNGNEDLAEILQ 166
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D T LHLAA GH +VE+LL+ A++N D TPL A GH
Sbjct: 66 LLKNGADVNADDSLGVTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGH 125
Query: 94 RDICRIL 100
+I +L
Sbjct: 126 LEIVEVL 132
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ G N D+ T LHLAA GH IVE+LL+ A++N D TPL A GH
Sbjct: 33 LMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAADRGH 92
Query: 94 RDICRILEVNG 104
++ +L NG
Sbjct: 93 LEVVEVLLKNG 103
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 55 AASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPL 114
AA G V +L+ A++N D TPL A +GH +I +L N G D D L
Sbjct: 21 AARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKN-GADVNADDSL 79
Query: 115 TV 116
V
Sbjct: 80 GV 81
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 35/268 (13%)
Query: 121 DSNEVNFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA 177
D + N+D E+ +M + G +GE W+ + + +K+ +++
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFL 62
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLP 229
K+ ++E++HPN++Q LG +ITE++ GNL L + V L +
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 230 TALRYALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQ 272
T + A++ ARN L E +K+ ++ + Y + +
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR- 331
S+A N K D+ +FG + ++ + + D + + E +++ R
Sbjct: 183 WTAPESLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERP 239
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAV 357
CP ++ +L+ C +PS RP+FA +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 58/275 (21%)
Query: 127 FDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL 186
++ EL L + + +G FG+ +RG V IK+ + + + +L
Sbjct: 9 LNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLA----EASVMTQL 62
Query: 187 RHPNILQFLGSIVLGEE---MILITEYLPKGNLKGILSKKVR--LDLPTALRYALDI--- 238
RH N++Q LG IV EE + ++TEY+ KG+L L + R L L+++LD+
Sbjct: 63 RHSNLVQLLGVIV--EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 120
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI---- 279
ARN+L E + K+ ++ + +E S D +
Sbjct: 121 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL---------TKEASSTQDTGKLPVKW 171
Query: 280 -ASNVLDD----TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV--NFEPKFQISR- 331
A L + TK D+ SFG + +++ + + + LK V E +++
Sbjct: 172 TAPEALREAAFSTKSDVWSFGILLWEIYSFGRV----PYPRIPLKDVVPRVEKGYKMDAP 227
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP + +++ C + D + RP+F + LE +
Sbjct: 228 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 262
>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1
Length = 167
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 20 LSFASRGDRVGLNQ-MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L FA+ +RV + + +L+ G + +D LH A S GH + ELL+++ A +N+ D
Sbjct: 48 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 107
Query: 79 RWQRTPLTDARLYGHRDICRILEVNGG----KDFIHDQPLTVRNEKDSN 123
W+ TPL +A G +IC++L +G K+ + PL + + D++
Sbjct: 108 LWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTD 156
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 40 SPNVQDYDKR--TALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
S N +D + R T LH AA +VE LLQ+ A+++ KD+ PL +A YGH ++
Sbjct: 34 SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVA 93
Query: 98 RILEVNG 104
+L +G
Sbjct: 94 ELLVKHG 100
>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human 3bp2
pdb|3TWR|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human 3bp2
pdb|3TWR|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human 3bp2
pdb|3TWR|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human 3bp2
pdb|3TWS|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWS|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWS|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWS|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Terf1 (Chimeric Peptide)
pdb|3TWT|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWT|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWT|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWT|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Mcl1 (Chimeric Peptide)
pdb|3TWV|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWV|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWV|C Chain C, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWV|D Chain D, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Numa1 (Chimeric Peptide)
pdb|3TWW|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Lnpep (Chimeric Peptide)
pdb|3TWW|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Lnpep (Chimeric Peptide)
pdb|3TWX|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Fnbp1 (Chimeric Peptide)
pdb|3TWX|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 In
Complex With Peptide From Human Fnbp1 (Chimeric Peptide)
Length = 165
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 20 LSFASRGDRVGLNQ-MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L FA+ +RV + + +L+ G + +D LH A S GH + ELL+++ A +N+ D
Sbjct: 46 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 105
Query: 79 RWQRTPLTDARLYGHRDICRILEVNGG----KDFIHDQPLTVRNEKDSN 123
W+ TPL +A G +IC++L +G K+ + PL + + D++
Sbjct: 106 LWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTD 154
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 40 SPNVQDYDKR--TALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
S N +D + R T LH AA +VE LLQ+ A+++ KD+ PL +A YGH ++
Sbjct: 32 SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVA 91
Query: 98 RILEVNG 104
+L +G
Sbjct: 92 ELLVKHG 98
>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Maltose Binding Protein
Length = 169
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ G N D T LHLAA GH IVE+LL++ A+++ D + TPL A +GH
Sbjct: 33 LMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAYWGH 92
Query: 94 RDICRILEVNG 104
+I +L NG
Sbjct: 93 LEIVEVLLKNG 103
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D D T LHLAA G+ IVE+LL++ A++N +D++ +T + G+
Sbjct: 99 LLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGN 158
Query: 94 RDICRILE 101
D+ IL+
Sbjct: 159 EDLAEILQ 166
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G + D T LHLAA GH IVE+LL+ A++N D TPL A +G+
Sbjct: 66 LLKHGADVDASDVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGY 125
Query: 94 RDICRIL 100
+I +L
Sbjct: 126 LEIVEVL 132
>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo
Form)
pdb|3TWQ|B Chain B, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo
Form)
Length = 175
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 5/109 (4%)
Query: 20 LSFASRGDRVGLNQ-MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L FA+ +RV + + +L+ G + +D LH A S GH + ELL+++ A +N+ D
Sbjct: 50 LHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVAD 109
Query: 79 RWQRTPLTDARLYGHRDICRILEVNGG----KDFIHDQPLTVRNEKDSN 123
W+ TPL +A G +IC++L +G K+ + PL + + D++
Sbjct: 110 LWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTD 158
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 40 SPNVQDYDKR--TALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
S N +D + R T LH AA +VE LLQ+ A+++ KD+ PL +A YGH ++
Sbjct: 36 SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVA 95
Query: 98 RILEVNG 104
+L +G
Sbjct: 96 ELLVKHG 102
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 58/275 (21%)
Query: 127 FDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL 186
++ EL L + + +G FG+ +RG V IK+ + + + +L
Sbjct: 18 LNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLA----EASVMTQL 71
Query: 187 RHPNILQFLGSIVLGEE---MILITEYLPKGNLKGILSKKVR--LDLPTALRYALDI--- 238
RH N++Q LG IV EE + ++TEY+ KG+L L + R L L+++LD+
Sbjct: 72 RHSNLVQLLGVIV--EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 129
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI---- 279
ARN+L E + K+ ++ + +E S D +
Sbjct: 130 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL---------TKEASSTQDTGKLPVKW 180
Query: 280 -ASNVLDD----TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV--NFEPKFQISR- 331
A L + TK D+ SFG + +++ + + + LK V E +++
Sbjct: 181 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRV----PYPRIPLKDVVPRVEKGYKMDAP 236
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP + +++ C + D + RP+F + LE +
Sbjct: 237 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 58/275 (21%)
Query: 127 FDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL 186
++ EL L + + +G FG+ +RG V IK+ + + + +L
Sbjct: 3 LNMKELKLLQT--IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLA----EASVMTQL 56
Query: 187 RHPNILQFLGSIVLGEE---MILITEYLPKGNLKGILSKKVR--LDLPTALRYALDI--- 238
RH N++Q LG IV EE + ++TEY+ KG+L L + R L L+++LD+
Sbjct: 57 RHSNLVQLLGVIV--EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI---- 279
ARN+L E + K+ ++ + +E S D +
Sbjct: 115 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL---------TKEASSTQDTGKLPVKW 165
Query: 280 -ASNVLDD----TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV--NFEPKFQISR- 331
A L + TK D+ SFG + +++ + + + LK V E +++
Sbjct: 166 TAPEALREKKFSTKSDVWSFGILLWEIYSFGRV----PYPRIPLKDVVPRVEKGYKMDAP 221
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP + +++ C + D + RP+F + LE +
Sbjct: 222 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 256
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 35/268 (13%)
Query: 121 DSNEVNFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA 177
D + N+D E+ +M + G +GE W+ + + +K+ +++
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFL 62
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLP 229
K+ ++E++HPN++Q LG +ITE++ GNL L + V L +
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 230 TALRYALDI------------ARNLLQDEGDHLKIGEYWVQMFY----EQIHPNQENS-Q 272
T + A++ ARN L E +K+ ++ + H + +
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 182
Query: 273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR- 331
S+A N K D+ +FG + ++ + + D + + E +++ R
Sbjct: 183 WTAPESLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERP 239
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAV 357
CP ++ +L+ C +PS RP+FA +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
N+D E+ +M + G +GE W+ + + +K+ +++ K+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
++E++HPN++Q LG +ITE++ GNL L + V L + T +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
A++ ARN L E +K+ ++ + Y + +
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
S+A N K D+ +FG + ++ + + D + + E +++ R CP
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 239
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
++ +L+ C +PS RP+FA +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEI 262
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
N+D E+ +M + G +GE W+ + + +K+ +++ K+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 64
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
++E++HPN++Q LG +ITE++ GNL L + V L + T +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
A++ ARN L E +K+ ++ + Y + +
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE 184
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
S+A N K D+ +FG + ++ + + D + + E +++ R CP
Sbjct: 185 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 241
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
++ +L+ C +PS RP+FA +
Sbjct: 242 KVYELMRACWQWNPSDRPSFAEI 264
>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat
Domain In Complex With Pinch1 Lim1 Domain
pdb|3IXE|A Chain A, Structural Basis Of Competition Between Pinch1 And Pinch2
For Binding To The Ankyrin Repeat Domain Of
Integrin-Linked Kinase
Length = 179
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 20 LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L +A R R + +ML G NV + T LHLAAS GH IV+ LLQYKA++N +
Sbjct: 43 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 102
Query: 79 RWQRTPLTDARLYGHRDICRILEVNGG 105
PL A +G + L NG
Sbjct: 103 EHGNVPLHYACFWGQDQVAEDLVANGA 129
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
N+D E+ +M + G +GE W+ + + +K+ +++ K+
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 63
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
++E++HPN++Q LG +ITE++ GNL L + V L + T +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
A++ ARN L E +K+ ++ + Y + +
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPE 183
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
S+A N K D+ +FG + ++ + + D + + E +++ R CP
Sbjct: 184 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 240
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
++ +L+ C +PS RP+FA +
Sbjct: 241 KVYELMRACWQWNPSDRPSFAEI 263
>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex
Length = 171
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 20 LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L +A R R + +ML G NV + T LHLAAS GH IV+ LLQYKA++N +
Sbjct: 38 LHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVN 97
Query: 79 RWQRTPLTDARLYGHRDICRILEVNGG 105
PL A +G + L NG
Sbjct: 98 EHGNVPLHYACFWGQDQVAEDLVANGA 124
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
N+D E+ +M + G +GE W+ + + +K+ +++ K+
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 66
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
++E++HPN++Q LG +ITE++ GNL L + V L + T +
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 126
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
A++ ARN L E +K+ ++ + Y + +
Sbjct: 127 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 186
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
S+A N K D+ +FG + ++ + + D + + E +++ R CP
Sbjct: 187 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 243
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
++ +L+ C +PS RP+FA +
Sbjct: 244 KVYELMRACWQWNPSDRPSFAEI 266
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 111/268 (41%), Gaps = 35/268 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
N+D E+ +M + G +GE W+ + + +K+ +++ K+
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 308
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
++E++HPN++Q LG +ITE++ GNL L + V L + T +
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
A++ ARN L E +K+ ++ + Y + +
Sbjct: 369 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 428
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
S+A N K D+ +FG + +++ + D + + E +++ R CP
Sbjct: 429 SLAYNKF-SIKSDVWAFGVLLWEIAT-YGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 485
Query: 335 RLKQLIAQCTNKDPSKRPTFAAVIITLE 362
++ +L+ C +PS RP+FA + E
Sbjct: 486 KVYELMRACWQWNPSDRPSFAEIHQAFE 513
>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module
Length = 91
Score = 52.8 bits (125), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A + D V + ++ G N +D D T LHLAA EGH IVE+LL+ A++N +D++ +
Sbjct: 12 AGQDDEVRI--LMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGK 69
Query: 83 TPLTDARLYGHRDICRILE 101
T + G+ D+ IL+
Sbjct: 70 TAFDISIDNGNEDLAEILQ 88
Score = 29.6 bits (65), Expect = 3.9, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 55 AASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHDQPL 114
AA G V +L+ A++N KD+ TPL A GH +I +L + G D
Sbjct: 9 AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVL-LKAGAD------- 60
Query: 115 TVRNEKDSNEVNFDIS 130
V + + FDIS
Sbjct: 61 -VNAQDKFGKTAFDIS 75
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
N+D E+ +M + G +GE W+ + + +K+ +++ K+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
++E++HPN++Q LG +ITE++ GNL L + V L + T +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
A++ ARN L E +K+ ++ + Y + +
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
S+A N K D+ +FG + ++ + + D + + E +++ R CP
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 239
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
++ +L+ C +PS RP+FA +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
N+D E+ +M + G +GE W+ + + +K+ +++ K+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 64
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
++E++HPN++Q LG +ITE++ GNL L + V L + T +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
A++ ARN L E +K+ ++ + Y + +
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 184
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
S+A N K D+ +FG + ++ + + D + + E +++ R CP
Sbjct: 185 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 241
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
++ +L+ C +PS RP+FA +
Sbjct: 242 KVYELMRACWQWNPSDRPSFAEI 264
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
N+D E+ +M + G +GE W+ + + +K+ +++ K+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 64
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
++E++HPN++Q LG +ITE++ GNL L + V L + T +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
A++ ARN L E +K+ ++ + Y + +
Sbjct: 125 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 184
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
S+A N K D+ +FG + ++ + + D + + E +++ R CP
Sbjct: 185 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 241
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
++ +L+ C +PS RP+FA +
Sbjct: 242 KVYELMRACWQWNPSDRPSFAEI 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
N+D E+ +M + G +GE W+ + + +K+ +++ K+
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 75
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
++E++HPN++Q LG +ITE++ GNL L + V L + T +
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
A++ ARN L E +K+ ++ + Y + +
Sbjct: 136 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 195
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
S+A N K D+ +FG + ++ + + D + + E +++ R CP
Sbjct: 196 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 252
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
++ +L+ C +PS RP+FA +
Sbjct: 253 KVYELMRACWQWNPSDRPSFAEI 275
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/268 (20%), Positives = 111/268 (41%), Gaps = 35/268 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
N+D E+ +M + G +GE W+ + + +K+ +++ K+
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 266
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
++E++HPN++Q LG +ITE++ GNL L + V L + T +
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 326
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
A++ ARN L E +K+ ++ + Y + +
Sbjct: 327 AMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 386
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
S+A N K D+ +FG + ++ + + D + + E +++ R CP
Sbjct: 387 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 443
Query: 335 RLKQLIAQCTNKDPSKRPTFAAVIITLE 362
++ +L+ C +PS RP+FA + E
Sbjct: 444 KVYELMRACWQWNPSDRPSFAEIHQAFE 471
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
N+D E+ +M + G +GE W+ + + +K+ +++ K+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--------SKKVRLDLPTALRY 234
++E++HPN++Q LG +I E++ GNL L S V L + T +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
A++ ARN L E +K+ ++ + Y + +
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
S+A N K D+ +FG + ++ + + D + + E +++ R CP
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 239
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
++ +L+ C +PS RP+FA +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
N+D E+ +M + G +GE W+ + + +K+ +++ K+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 62
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--------SKKVRLDLPTALRY 234
++E++HPN++Q LG +I E++ GNL L S V L + T +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQRNDNS 277
A++ ARN L E +K+ ++ + Y + +
Sbjct: 123 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPE 182
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
S+A N K D+ +FG + ++ + + D + + E +++ R CP
Sbjct: 183 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 239
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
++ +L+ C +PS RP+FA +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEI 262
>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|D Chain D, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 167
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D T LHLAA EGH IVE+LL+Y A++N +D++ +T + G+
Sbjct: 99 LLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGADVNAQDKFGKTAFDISIDNGN 158
Query: 94 RDICR 98
D+ +
Sbjct: 159 EDLAK 163
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ G N D T LHLAA GH IVE+LL++ A+++ D + TPL A + GH
Sbjct: 33 LIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAADVYGFTPLHLAAMTGH 92
Query: 94 RDICRIL 100
+I +L
Sbjct: 93 LEIVEVL 99
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G + D T LHLAA GH IVE+LL+Y A++N D TPL A GH
Sbjct: 66 LLKHGADVDAADVYGFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGH 125
Query: 94 RDICRIL 100
+I +L
Sbjct: 126 LEIVEVL 132
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 102/243 (41%), Gaps = 32/243 (13%)
Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGE 202
G FGE W+ + + +K+ +++ K+ ++E++HPN++Q LG
Sbjct: 22 GQFGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 203 EMILITEYLPKGNLKGIL--------SKKVRLDLPTALRYALDI------------ARNL 242
+ITE++ GNL L S V L + T + A++ ARN
Sbjct: 81 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 140
Query: 243 LQDEGDHLKIGEYWVQMFY----EQIHPNQENS-QRNDNSSIASNVLDDTKKDICSFGYI 297
L E +K+ ++ + H + + S+A N K D+ +FG +
Sbjct: 141 LVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVL 199
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTF 354
++ + + D + + E +++ R CP ++ +L+ C +PS RP+F
Sbjct: 200 LWE-IATYGMSPYPGIDPSQVYEL-LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 257
Query: 355 AAV 357
A +
Sbjct: 258 AEI 260
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 111/268 (41%), Gaps = 35/268 (13%)
Query: 121 DSNEVNFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA 177
D + N+D E+ +M + G +GE W+ + + +K+ +++
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFL 62
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLP 229
K+ ++E++HPN++Q LG +I E++ GNL L + V L +
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMA 122
Query: 230 TALRYALDI------------ARNLLQDEGDHLKIGEYWVQMF-----YEQIHPNQENSQ 272
T + A++ ARN L E +K+ ++ + Y + +
Sbjct: 123 TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 273 RNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR- 331
S+A N K D+ +FG + ++ + + D + + E +++ R
Sbjct: 183 WTAPESLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERP 239
Query: 332 --CPNRLKQLIAQCTNKDPSKRPTFAAV 357
CP ++ +L+ C +PS RP+FA +
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex
pdb|2V4H|D Chain D, Nemo Cc2-Lz Domain - 1d5 Darpin Complex
Length = 136
Score = 51.6 bits (122), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ G N D T LHLAA H IVE+LL++ A++N D TPL A L+GH
Sbjct: 33 LMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDGSTPLHLAALFGH 92
Query: 94 RDICRILEVNGG 105
+I +L +G
Sbjct: 93 LEIVEVLLKHGA 104
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D D T LHLAA GH IVE+LL++ A++N +D++ +T + G+
Sbjct: 66 LLKHGADVNAHDNDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGN 125
Query: 94 RDICRILE 101
D+ IL+
Sbjct: 126 EDLAEILQ 133
Score = 32.0 bits (71), Expect = 0.85, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 55 AASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFIHD 111
AA G V +L+ A++N DR TPL A Y H +I +L +G HD
Sbjct: 21 AARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHD 77
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 111/279 (39%), Gaps = 48/279 (17%)
Query: 125 VNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK-- 182
+ D +EL ++ G FG+ A W G + +K+ + P + + +N +
Sbjct: 2 LEIDFAELTL--EEIIGIGGFGKVYRAFWIGD---EVAVKAARHDPDEDISQTIENVRQE 56
Query: 183 ---LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA 239
L+HPNI+ G + + L+ E+ G L +LS K R+ + +A+ IA
Sbjct: 57 AKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQIA 115
Query: 240 R--NLLQDE-----------------------GDH----LKIGEYWVQMFYEQIHPNQEN 270
R N L DE GD LKI ++ + H +
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF---GLAREWHRTTKM 172
Query: 271 SQRNDNSSIASNVLDDTK----KDICSFGYIFYQMLEGK-HLQTNNSFDFMHLKSVNFEP 325
S + +A V+ + D+ S+G + +++L G+ + + + ++N
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLA 232
Query: 326 KFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
S CP +L+ C N DP RP+F ++ L +
Sbjct: 233 LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 112/276 (40%), Gaps = 49/276 (17%)
Query: 121 DSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN 180
D ++NF +++LN HS GE +W+G +V V+K + K ++
Sbjct: 8 DFKQLNF-LTKLNENHS--------GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEEC 58
Query: 181 CKLRELRHPNILQFLGSI--VLGEEMILITEYLPKGNLKGILSKKVR--LDLPTALRYAL 236
+LR HPN+L LG+ LIT + P G+L +L + +D A+++AL
Sbjct: 59 PRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFAL 118
Query: 237 DIA--------------------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDN 276
D A R++ DE +I V+ + Q +
Sbjct: 119 DXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSF------QSPGRXYAP 172
Query: 277 SSIASNVL----DDTKK---DICSFGYIFYQML--EGKHLQTNNSFDFMHLKSVNFEPKF 327
+ +A L +DT + D SF + ++++ E +N + P
Sbjct: 173 AWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTI 232
Query: 328 QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
P+ + +L C N+DP+KRP F ++ LE+
Sbjct: 233 PPGISPH-VSKLXKICXNEDPAKRPKFDXIVPILEK 267
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 185 ELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK-----------VRLDLPTALR 233
+ HPNI++ G + G +++TEY+ G+L L + + +R
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 234 YALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD 285
Y D+ ARN+L D K+ ++ + E P+ + I +
Sbjct: 166 YLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED-DPDAAXTTTGGKIPIRWTAPE 224
Query: 286 -------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNR 335
+ D+ SFG + +++L N + + SV E +++ CP+
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV--EEGYRLPAPMGCPHA 282
Query: 336 LKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
L QL+ C +KD ++RP F+ ++ L+ +
Sbjct: 283 LHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 102/243 (41%), Gaps = 32/243 (13%)
Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGE 202
G +GE W+ + + +K+ +++ K+ ++E++HPN++Q LG
Sbjct: 22 GQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 203 EMILITEYLPKGNLKGIL--------SKKVRLDLPTALRYALDI------------ARNL 242
+ITE++ GNL L S V L + T + A++ ARN
Sbjct: 81 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 140
Query: 243 LQDEGDHLKIGEYWVQMFYE----QIHPNQENS-QRNDNSSIASNVLDDTKKDICSFGYI 297
L E +K+ ++ + H + + S+A N K D+ +FG +
Sbjct: 141 LVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVL 199
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTF 354
++ + + D + + E +++ R CP ++ +L+ C +PS RP+F
Sbjct: 200 LWE-IATYGMSPYPGIDPSQVYEL-LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 257
Query: 355 AAV 357
A +
Sbjct: 258 AEI 260
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 185 ELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK-----------VRLDLPTALR 233
+ HPNI++ G + G +++TEY+ G+L L + + +R
Sbjct: 106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 234 YALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD 285
Y D+ ARN+L D K+ ++ + E P+ + I +
Sbjct: 166 YLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED-DPDAAYTTTGGKIPIRWTAPE 224
Query: 286 -------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNR 335
+ D+ SFG + +++L N + + SV E +++ CP+
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV--EEGYRLPAPMGCPHA 282
Query: 336 LKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
L QL+ C +KD ++RP F+ ++ L+ +
Sbjct: 283 LHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 52/227 (22%)
Query: 183 LRELRHPNILQFLGSIVL--GEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
LR L H NI+++ G G + LI E+LP G+LK L K K +++L L+YA+ I
Sbjct: 65 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 124
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS--- 278
ARN+L + +KIG++ + + I ++E D+
Sbjct: 125 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT---KAIETDKEXXTVKDDRDSPV 181
Query: 279 --IASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN-FEPKFQISR 331
A L +K D+ SFG +++L + +++S + LK + + ++R
Sbjct: 182 FWYAPECLMQSKFYIASDVWSFGVTLHELL--TYCDSDSSPMALFLKMIGPTHGQMTVTR 239
Query: 332 ----------------CPNRLKQLIAQCTNKDPSKRPTFAAVIITLE 362
CP+ + QL+ +C PS R +F +I E
Sbjct: 240 LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 286
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 52/227 (22%)
Query: 183 LRELRHPNILQFLGSIVL--GEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
LR L H NI+++ G G + LI E+LP G+LK L K K +++L L+YA+ I
Sbjct: 77 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 136
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS--- 278
ARN+L + +KIG++ + + I ++E D+
Sbjct: 137 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLT---KAIETDKEXXTVKDDRDSPV 193
Query: 279 --IASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN-FEPKFQISR 331
A L +K D+ SFG +++L + +++S + LK + + ++R
Sbjct: 194 FWYAPECLMQSKFYIASDVWSFGVTLHELL--TYCDSDSSPMALFLKMIGPTHGQMTVTR 251
Query: 332 ----------------CPNRLKQLIAQCTNKDPSKRPTFAAVIITLE 362
CP+ + QL+ +C PS R +F +I E
Sbjct: 252 LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 109/263 (41%), Gaps = 35/263 (13%)
Query: 126 NFDISELNTLHSSMVEQ---GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCK 182
N+D E+ +M + G +GE W+ + + +K+ +++ K+
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAV 63
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK--------KVRLDLPTALRY 234
++E++HPN++Q LG +I E++ GNL L + V L + T +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 235 ALDI------------ARNLLQDEGDHLKIGEYWVQMFY----EQIHPNQENS-QRNDNS 277
A++ ARN L E +K+ ++ + H + +
Sbjct: 124 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE 183
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPN 334
S+A N K D+ +FG + ++ + + D + + E +++ R CP
Sbjct: 184 SLAYNKF-SIKSDVWAFGVLLWE-IATYGMSPYPGIDLSQVYEL-LEKDYRMERPEGCPE 240
Query: 335 RLKQLIAQCTNKDPSKRPTFAAV 357
++ +L+ C +PS RP+FA +
Sbjct: 241 KVYELMRACWQWNPSDRPSFAEI 263
>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex
pdb|3UTM|B Chain B, Crystal Structure Of A Mouse Tankyrase-Axin Complex
Length = 351
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 20 LSFASRGDRVGLNQML-REGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L A+ +RV + Q+L + G + +D LH A S GH + ELLL++ A +N D
Sbjct: 62 LHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMD 121
Query: 79 RWQRTPLTDARLYGHRDICRILEVNGG 105
WQ TPL +A ++C +L +G
Sbjct: 122 LWQFTPLHEAASKNRVEVCSLLLSHGA 148
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+LR+G + N ++ D T LH+AA H ++E+L ++ A +N D +T L A L GH
Sbjct: 233 LLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGH 292
Query: 94 RDICRIL 100
CR+L
Sbjct: 293 LQTCRLL 299
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 42 NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILE 101
+ D K T LHLAA IV+LLLQ+ A+++ KD+ PL +A YGH ++ +L
Sbjct: 52 HASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLL 111
Query: 102 VNGG 105
+G
Sbjct: 112 KHGA 115
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 44 QDYDKRTALHLAASEGHAP---IVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
Q TALH A + H + ELLL+ AN+N K++ TPL A H D+ +L
Sbjct: 207 QPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVL 266
Query: 101 EVNGGK 106
+G K
Sbjct: 267 HKHGAK 272
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 38/251 (15%)
Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIVL 200
G FGE W GTW T + P M + ++ +++L+H ++Q L ++V
Sbjct: 20 GQFGEV----WMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQ-LYAVVS 74
Query: 201 GEEMILITEYLPKGNLKGIL--SKKVRLDLPTALRYALDIAR------------------ 240
E + ++TEY+ KG+L L + L LP + A +A
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSA 134
Query: 241 NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDT-------KKDICS 293
N+L G KI ++ + E N+ +++ I + K D+ S
Sbjct: 135 NILVGNGLICKIADFGLARLIED---NEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 294 FGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTNKDPSKRP 352
FG + +++ + + L+ V + + CP L +L+ C KDP +RP
Sbjct: 192 FGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHCWKKDPEERP 251
Query: 353 TFAAVIITLEE 363
TF + LE+
Sbjct: 252 TFEYLQSFLED 262
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 119/283 (42%), Gaps = 39/283 (13%)
Query: 120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKD 179
+DS++ +++I + + G FG KW G VK + ++ P L A
Sbjct: 25 RDSSD-DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFK 80
Query: 180 N--CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPT 230
N LR+ RH NIL F+G ++ ++T++ +L I+ K + D+
Sbjct: 81 NEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 139
Query: 231 ALRYALDI------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS- 277
+D + N+ E +KIG++ + + + + Q + +
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 199
Query: 278 SIASNVLDDTKK-------DICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKF 327
+A V+ K D+ +FG + Y+++ G+ + NN + + + P
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 259
Query: 328 QISR--CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
R CP +K+L+A+C K +RP F ++ ++E ++ L
Sbjct: 260 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 302
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 119/283 (42%), Gaps = 39/283 (13%)
Query: 120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKD 179
+DS++ +++I + + G FG KW G VK + ++ P L A
Sbjct: 24 RDSSD-DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFK 79
Query: 180 N--CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPT 230
N LR+ RH NIL F+G ++ ++T++ +L I+ K + D+
Sbjct: 80 NEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 138
Query: 231 ALRYALDI------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS- 277
+D + N+ E +KIG++ + + + + Q + +
Sbjct: 139 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 198
Query: 278 SIASNVLDDTKK-------DICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKF 327
+A V+ K D+ +FG + Y+++ G+ + NN + + + P
Sbjct: 199 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 258
Query: 328 QISR--CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
R CP +K+L+A+C K +RP F ++ ++E ++ L
Sbjct: 259 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 301
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 101/243 (41%), Gaps = 32/243 (13%)
Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGE 202
G +GE W+ + + +K+ +++ K+ ++E++HPN++Q LG
Sbjct: 22 GQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 80
Query: 203 EMILITEYLPKGNLKGIL--------SKKVRLDLPTALRYALDI------------ARNL 242
+I E++ GNL L S V L + T + A++ ARN
Sbjct: 81 PFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 140
Query: 243 LQDEGDHLKIGEYWVQMFY----EQIHPNQENS-QRNDNSSIASNVLDDTKKDICSFGYI 297
L E +K+ ++ + H + + S+A N K D+ +FG +
Sbjct: 141 LVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF-SIKSDVWAFGVL 199
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTF 354
++ + + D + + E +++ R CP ++ +L+ C +PS RP+F
Sbjct: 200 LWE-IATYGMSPYPGIDPSQVYEL-LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 257
Query: 355 AAV 357
A +
Sbjct: 258 AEI 260
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 38/263 (14%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGS 197
+ G FG KW G VK + ++ P L A N LR+ RH NIL F+G
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 198 IVLGEEMILITEYLPKGNLK---GILSKKVRL----DLPTALRYALDI------------ 238
++ ++T++ +L I+ K + D+ +D
Sbjct: 73 ST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 131
Query: 239 ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS-SIASNVLDDTKK-------D 290
+ N+ E +KIG++ + + + + Q + + +A V+ K D
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 291 ICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKFQISR--CPNRLKQLIAQCTN 345
+ +FG + Y+++ G+ + NN + + + P R CP +K+L+A+C
Sbjct: 192 VYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLK 251
Query: 346 KDPSKRPTFAAVIITLEEVSACL 368
K +RP F ++ ++E ++ L
Sbjct: 252 KKRDERPLFPQILASIELLARSL 274
>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From
Lactococcal Phage Tp901-1
Length = 136
Score = 48.5 bits (114), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ G N +D T LHLAA H IVE+LL+ A++N D TPL +YGH
Sbjct: 33 LMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIGETPLHLVAMYGH 92
Query: 94 RDICRILEVNGG 105
+I +L +G
Sbjct: 93 LEIVEVLLKHGA 104
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 20 LSFASRGDRVGLNQ-MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L A+ D + + + +L+ G N D T LHL A GH IVE+LL++ A++N +D
Sbjct: 51 LHLAAMNDHLEIVEVLLKNGADVNAIDAIGETPLHLVAMYGHLEIVEVLLKHGADVNAQD 110
Query: 79 RWQRTPLTDARLYGHRDICRILE 101
++ +T + G+ D+ IL+
Sbjct: 111 KFGKTAFDISIDNGNEDLAEILQ 133
Score = 30.4 bits (67), Expect = 2.1, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 55 AASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGK----DFIH 110
AA G V +L+ A++N +D+ TPL A + H +I +L NG D I
Sbjct: 21 AARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIG 80
Query: 111 DQPL 114
+ PL
Sbjct: 81 ETPL 84
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 56/234 (23%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--SKKV--------------RL 226
L+++ HP++++ G+ ++LI EY G+L+G L S+KV L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 227 DLP------------------TALRYALDI--------ARNLLQDEGDHLKIGEYWVQM- 259
D P ++Y ++ ARN+L EG +KI ++ +
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 260 FYEQIHPNQENSQRNDNSSIASNVLDD----TKKDICSFGYIFYQM--LEGK---HLQTN 310
YE+ + + R +A L D T+ D+ SFG + +++ L G +
Sbjct: 200 VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 311 NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
F+ + P C + +L+ QC ++P KRP FA + LE++
Sbjct: 260 RLFNLLKTGHRMERP----DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 56/234 (23%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--SKKV--------------RL 226
L+++ HP++++ G+ ++LI EY G+L+G L S+KV L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 227 DLP------------------TALRYALDI--------ARNLLQDEGDHLKIGEYWVQM- 259
D P ++Y ++ ARN+L EG +KI ++ +
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 260 FYEQIHPNQENSQRNDNSSIASNVLDD----TKKDICSFGYIFYQM--LEGK---HLQTN 310
YE+ + + R +A L D T+ D+ SFG + +++ L G +
Sbjct: 200 VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 311 NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
F+ + P C + +L+ QC ++P KRP FA + LE++
Sbjct: 260 RLFNLLKTGHRMERP----DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 38/263 (14%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGS 197
+ G FG KW G VK + ++ P L A N LR+ RH NIL F+G
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 198 IVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPTALRYALDI------------ 238
++ ++T++ +L I+ K + D+ +D
Sbjct: 78 ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 136
Query: 239 ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS-SIASNVLDDTKK-------D 290
+ N+ E +KIG++ + + + + Q + + +A V+ K D
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 291 ICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKFQISR--CPNRLKQLIAQCTN 345
+ +FG + Y+++ G+ + NN + + + P R CP +K+L+A+C
Sbjct: 197 VYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLK 256
Query: 346 KDPSKRPTFAAVIITLEEVSACL 368
K +RP F ++ ++E ++ L
Sbjct: 257 KKRDERPLFPQILASIELLARSL 279
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 78/198 (39%), Gaps = 44/198 (22%)
Query: 202 EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI------------------ARNL 242
+ + L+ EYLP G L+ L + + RLD L Y+ I ARN+
Sbjct: 99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 158
Query: 243 LQDEGDHLKIGEYWVQM-------FYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFG 295
L + H+KI ++ + +Y P Q S++ N+ + D+ SFG
Sbjct: 159 LVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS-RQSDVWSFG 217
Query: 296 YIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR----------------CPNRLKQL 339
+ Y++ + S +F+ + + +SR CP + +L
Sbjct: 218 VVLYELFTYCDKSCSPSAEFLRMMGCERDVP-ALSRLLELLEEGQRLPAPPACPAEVHEL 276
Query: 340 IAQCTNKDPSKRPTFAAV 357
+ C P RP+F+A+
Sbjct: 277 MKLCWAPSPQDRPSFSAL 294
>pdb|1UOH|A Chain A, Human Gankyrin
pdb|1TR4|A Chain A, Solution Structure Of Human Oncogenic Protein Gankyrin
Length = 226
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 20 LSFASRGDRVGLNQMLREG-TSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L +A+ +R + ML EG +P+ +D+ + TA+H AA++G+ ++ +LL YKA+ N++D
Sbjct: 110 LHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQD 169
Query: 79 RWQRTPL 85
TPL
Sbjct: 170 TEGNTPL 176
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 32/62 (51%)
Query: 45 DYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNG 104
D D RTALH A S GH IVE LLQ +N KD +PL A G +I + L G
Sbjct: 37 DQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKG 96
Query: 105 GK 106
+
Sbjct: 97 AQ 98
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A++G+ ++ +L S N+QD + T LHLA E +LL+ A++ ++++ ++
Sbjct: 147 AAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEK 206
Query: 83 TPLTDAR 89
TPL A+
Sbjct: 207 TPLQVAK 213
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
AS G + +L +G N + + T LH AAS+ I +LL+ AN + KD ++
Sbjct: 81 ASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEA 140
Query: 83 TPLTDARLYGHRDICRIL 100
T + A G+ + IL
Sbjct: 141 TAMHRAAAKGNLKMIHIL 158
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N +D + LH+AAS G IV+ LL A +N ++ TPL A
Sbjct: 59 LLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNR 118
Query: 94 RDICRILEVNGGKD 107
+I +L + GG +
Sbjct: 119 HEIAVML-LEGGAN 131
>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin
Length = 227
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 20 LSFASRGDRVGLNQMLREG-TSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L +A+ +R + ML EG +P+ +D+ + TA+H AA++G+ ++ +LL YKA+ N++D
Sbjct: 111 LHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQD 170
Query: 79 RWQRTPL 85
TPL
Sbjct: 171 TEGNTPL 177
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 32/62 (51%)
Query: 45 DYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNG 104
D D RTALH A S GH IVE LLQ +N KD +PL A G +I + L G
Sbjct: 38 DQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKG 97
Query: 105 GK 106
+
Sbjct: 98 AQ 99
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A++G+ ++ +L S N+QD + T LHLA E +LL+ A++ ++++ ++
Sbjct: 148 AAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEK 207
Query: 83 TPLTDAR 89
TPL A+
Sbjct: 208 TPLQVAK 214
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
AS G + +L +G N + + T LH AAS+ I +LL+ AN + KD ++
Sbjct: 82 ASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEA 141
Query: 83 TPLTDARLYGHRDICRIL 100
T + A G+ + IL
Sbjct: 142 TAMHRAAAKGNLKMIHIL 159
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N +D + LH+AAS G IV+ LL A +N ++ TPL A
Sbjct: 60 LLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNR 119
Query: 94 RDICRILEVNGGKD 107
+I +L + GG +
Sbjct: 120 HEIAVML-LEGGAN 132
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 38/263 (14%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGS 197
+ G FG KW G VK + ++ P L A N LR+ RH NIL F+G
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 198 IVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPTALRYALDI------------ 238
++ ++T++ +L I+ K + D+ +D
Sbjct: 78 ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 136
Query: 239 ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS-SIASNVLDDTKK-------D 290
+ N+ E +KIG++ + + + + Q + + +A V+ K D
Sbjct: 137 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 196
Query: 291 ICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKFQISR--CPNRLKQLIAQCTN 345
+ +FG + Y+++ G+ + NN + + + P R CP +K+L+A+C
Sbjct: 197 VYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLK 256
Query: 346 KDPSKRPTFAAVIITLEEVSACL 368
K +RP F ++ ++E ++ L
Sbjct: 257 KKRDERPLFPQILASIELLARSL 279
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 38/263 (14%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGS 197
+ G FG KW G VK + ++ P L A N LR+ RH NIL F+G
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 198 IVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPTALRYALDI------------ 238
++ ++T++ +L I+ K + D+ +D
Sbjct: 73 ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 131
Query: 239 ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS-SIASNVLDDTKK-------D 290
+ N+ E +KIG++ + + + + Q + + +A V+ K D
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 291 ICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKFQISR--CPNRLKQLIAQCTN 345
+ +FG + Y+++ G+ + NN + + + P R CP +K+L+A+C
Sbjct: 192 VYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLK 251
Query: 346 KDPSKRPTFAAVIITLEEVSACL 368
K +RP F ++ ++E ++ L
Sbjct: 252 KKRDERPLFPQILASIELLARSL 274
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
+R+ HP+I++ +G ++ + +I E G L+ L +K LDL + + YA +
Sbjct: 65 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
ARN+L D +K+G++ + + E + + + +A
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPES 183
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
++ + D+ FG +++L K Q + D + + N E CP L
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 242
Query: 338 QLIAQCTNKDPSKRPTFAAVIITLEEV 364
L+ +C DPS+RP F + L +
Sbjct: 243 SLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 56/234 (23%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL--SKKV--------------RL 226
L+++ HP++++ G+ ++LI EY G+L+G L S+KV L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 227 DLP------------------TALRYALDI--------ARNLLQDEGDHLKIGEYWVQM- 259
D P ++Y ++ ARN+L EG +KI ++ +
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 260 FYEQIHPNQENSQRNDNSSIASNVLDD----TKKDICSFGYIFYQM--LEGK---HLQTN 310
YE+ + + R +A L D T+ D+ SFG + +++ L G +
Sbjct: 200 VYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 311 NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
F+ + P C + +L+ QC ++P KRP FA + LE++
Sbjct: 260 RLFNLLKTGHRMERP----DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And
The Myosin Phosphatase Targeting Subunit 1 (mypt1)
Length = 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 50 TALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
TALH+AA++G+ +++LL+Q + ++N+KD TPL A +G + CRIL
Sbjct: 201 TALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRIL 251
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%)
Query: 19 FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
FL+ S GD + ++L G N + D TALH A + + +V+ L++ AN+N D
Sbjct: 44 FLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPD 103
Query: 79 RWQRTPLTDARLYGHRDICRIL 100
PL A G+ DI L
Sbjct: 104 NEGWIPLHAAASCGYLDIAEYL 125
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 38/263 (14%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGS 197
+ G FG KW G VK + ++ P L A N LR+ RH NIL F+G
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 198 IVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPTALRYALDI------------ 238
++ ++T++ +L I+ K + D+ +D
Sbjct: 75 ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 133
Query: 239 ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS-SIASNVLDDTKK-------D 290
+ N+ E +KIG++ + + + + Q + + +A V+ K D
Sbjct: 134 SNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 193
Query: 291 ICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKFQISR--CPNRLKQLIAQCTN 345
+ +FG + Y+++ G+ + NN + + + P R CP +K+L+A+C
Sbjct: 194 VYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLK 253
Query: 346 KDPSKRPTFAAVIITLEEVSACL 368
K +RP F ++ ++E ++ L
Sbjct: 254 KKRDERPLFPQILASIELLARSL 276
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 119/283 (42%), Gaps = 39/283 (13%)
Query: 120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKD 179
+DS++ +++I + + G FG KW G VK + ++ P L A
Sbjct: 25 RDSSD-DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFK 80
Query: 180 N--CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPT 230
N LR+ RH NIL F+G ++ ++T++ +L I+ K + D+
Sbjct: 81 NEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 139
Query: 231 ALRYALDI------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS- 277
+D + N+ E +KIG++ + + + + Q + +
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 199
Query: 278 SIASNVLDDTKK-------DICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKF 327
+A V+ K D+ +FG + Y+++ G+ + NN + + + P
Sbjct: 200 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 259
Query: 328 QISR--CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
R CP +K+L+A+C K +RP F ++ ++E ++ L
Sbjct: 260 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 302
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 79/198 (39%), Gaps = 44/198 (22%)
Query: 202 EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI------------------ARNL 242
+ + L+ EYLP G L+ L + + RLD L Y+ I ARN+
Sbjct: 86 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 145
Query: 243 LQDEGDHLKIGEYWV-------QMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFG 295
L + H+KI ++ + + +Y P Q S++ N+ + D+ SFG
Sbjct: 146 LVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFS-RQSDVWSFG 204
Query: 296 YIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR----------------CPNRLKQL 339
+ Y++ + S +F+ + + +SR CP + +L
Sbjct: 205 VVLYELFTYCDKSCSPSAEFLRMMGSERDVP-ALSRLLELLEEGQRLPAPPACPAEVHEL 263
Query: 340 IAQCTNKDPSKRPTFAAV 357
+ C P RP+F+A+
Sbjct: 264 MKLCWAPSPQDRPSFSAL 281
>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6
Atpase Of The 26s Proteasome
pdb|2DWZ|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6
Atpase Of The 26s Proteasome
pdb|2DWZ|C Chain C, Structure Of The Oncoprotein Gankyrin In Complex With S6
Atpase Of The 26s Proteasome
Length = 231
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 20 LSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR 79
L+++ + D + ++L + + D D RTALH A S GH IVE LLQ +N KD
Sbjct: 13 LAYSGKLDELK-ERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD 71
Query: 80 WQRTPLTDARLYGHRDICRILEVNGG 105
+PL A G +I + L V G
Sbjct: 72 AGWSPLHIAASAGRDEIVKALLVKGA 97
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 20 LSFASRGDRVGLNQMLREG-TSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L +A+ +R + ML EG +P+ +D+ TA+H AA++G+ +V +LL YKA+ N++D
Sbjct: 110 LHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQD 169
Query: 79 RWQRTPL 85
TPL
Sbjct: 170 TEGNTPL 176
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A++G+ ++ +L S N+QD + T LHLA E + L+ A++ ++++ ++
Sbjct: 147 AAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEK 206
Query: 83 TPLTDAR 89
TPL A+
Sbjct: 207 TPLQVAK 213
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
AS G + +L +G N + + T LH AAS+ I +LL+ AN + KD +
Sbjct: 81 ASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDA 140
Query: 83 TPLTDARLYGHRDICRIL 100
T + A G+ + IL
Sbjct: 141 TAMHRAAAKGNLKMVHIL 158
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N +D + LH+AAS G IV+ LL A++N ++ TPL A
Sbjct: 59 LLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNR 118
Query: 94 RDICRILEVNGGKD 107
+I +L + GG +
Sbjct: 119 HEIAVML-LEGGAN 131
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 119/283 (42%), Gaps = 39/283 (13%)
Query: 120 KDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKD 179
+DS++ +++I + + G FG KW G VK + ++ P L A
Sbjct: 17 RDSSD-DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFK 72
Query: 180 N--CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPT 230
N LR+ RH NIL F+G ++ ++T++ +L I+ K + D+
Sbjct: 73 NEVGVLRKTRHVNILLFMGYST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR 131
Query: 231 ALRYALDI------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS- 277
+D + N+ E +KIG++ + + + + Q + +
Sbjct: 132 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 191
Query: 278 SIASNVLDDTKK-------DICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKF 327
+A V+ K D+ +FG + Y+++ G+ + NN + + + P
Sbjct: 192 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 251
Query: 328 QISR--CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
R CP +K+L+A+C K +RP F ++ ++E ++ L
Sbjct: 252 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL 294
>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked
Site-Specifically, And Incoporated By Genetic Code
Expansion
pdb|3AJI|C Chain C, Structure Of Gankyrin-S6atpase Photo-Cross-Linked
Site-Specifically, And Incoporated By Genetic Code
Expansion
Length = 231
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 20 LSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDR 79
L+++ + D + ++L + + D D RTALH A S GH IVE LLQ +N KD
Sbjct: 13 LAYSGKLDELK-ERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDD 71
Query: 80 WQRTPLTDARLYGHRDICRILEVNGG 105
+PL A G +I + L V G
Sbjct: 72 AGWSPLHIAASAGXDEIVKALLVKGA 97
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 20 LSFASRGDRVGLNQMLREG-TSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L +A+ +R + ML EG +P+ +D+ TA+H AA++G+ +V +LL YKA+ N++D
Sbjct: 110 LHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQD 169
Query: 79 RWQRTPL 85
TPL
Sbjct: 170 TEGNTPL 176
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A++G+ ++ +L S N+QD + T LHLA E + L+ A++ ++++ ++
Sbjct: 147 AAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEK 206
Query: 83 TPLTDAR 89
TPL A+
Sbjct: 207 TPLQVAK 213
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
AS G + +L +G N + + T LH AAS+ I +LL+ AN + KD +
Sbjct: 81 ASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDA 140
Query: 83 TPLTDARLYGHRDICRIL 100
T + A G+ + IL
Sbjct: 141 TAMHRAAAKGNLKMVHIL 158
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N +D + LH+AAS G IV+ LL A++N ++ TPL A
Sbjct: 59 LLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNR 118
Query: 94 RDICRILEVNGGKD 107
+I +L + GG +
Sbjct: 119 HEIAVML-LEGGAN 131
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
+R+ HP+I++ +G ++ + +I E G L+ L +K LDL + + YA +
Sbjct: 70 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 128
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
ARN+L D +K+G++ + + E + + + +A
Sbjct: 129 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 188
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
++ + D+ FG +++L K Q + D + + N E CP L
Sbjct: 189 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 247
Query: 338 QLIAQCTNKDPSKRPTF----AAVIITLEEVSA 366
L+ +C DPS+RP F A + LEE A
Sbjct: 248 SLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 280
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
+R+ HP+I++ +G ++ + +I E G L+ L +K LDL + + YA +
Sbjct: 93 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 151
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
ARN+L D +K+G++ + + E + + + +A
Sbjct: 152 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 211
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
++ + D+ FG +++L K Q + D + + N E CP L
Sbjct: 212 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 270
Query: 338 QLIAQCTNKDPSKRPTF----AAVIITLEEVSA 366
L+ +C DPS+RP F A + LEE A
Sbjct: 271 SLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 303
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 77/197 (39%), Gaps = 42/197 (21%)
Query: 202 EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI------------------ARNL 242
+ + L+ EYLP G L+ L + + RLD L Y+ I ARN+
Sbjct: 87 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNI 146
Query: 243 LQDEGDHLKIGEYWV-------QMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFG 295
L + H+KI ++ + + +Y P Q S++ N+ + D+ SFG
Sbjct: 147 LVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF-SRQSDVWSFG 205
Query: 296 YIFYQMLEGKHLQTNNSFDFMHLKSVNFE-PKF--------------QISRCPNRLKQLI 340
+ Y++ + S +F+ + + P CP + +L+
Sbjct: 206 VVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELM 265
Query: 341 AQCTNKDPSKRPTFAAV 357
C P RP+F+A+
Sbjct: 266 KLCWAPSPQDRPSFSAL 282
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
+R+ HP+I++ +G ++ + +I E G L+ L +K LDL + + YA +
Sbjct: 68 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 126
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
ARN+L D +K+G++ + + E + + + +A
Sbjct: 127 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 186
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
++ + D+ FG +++L K Q + D + + N E CP L
Sbjct: 187 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 245
Query: 338 QLIAQCTNKDPSKRPTF----AAVIITLEEVSA 366
L+ +C DPS+RP F A + LEE A
Sbjct: 246 SLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 278
>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige
Inhibitor
pdb|4GRG|B Chain B, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige
Inhibitor
Length = 135
Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 35/68 (51%)
Query: 38 GTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDIC 97
G N DY T LHLAA GH IVE+LL+ A++N RTPL A H +I
Sbjct: 37 GADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTGRTPLHLAAWADHLEIV 96
Query: 98 RILEVNGG 105
+L +G
Sbjct: 97 EVLLKHGA 104
Score = 46.6 bits (109), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N RT LHLAA H IVE+LL++ A++N +D++ +T + G+
Sbjct: 66 LLKNGADVNATGNTGRTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGN 125
Query: 94 RDICRILE 101
D+ IL+
Sbjct: 126 EDLAEILQ 133
Score = 35.4 bits (80), Expect = 0.061, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 25/51 (49%)
Query: 55 AASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGG 105
AA G V +L A++N D W TPL A + GH +I +L NG
Sbjct: 21 AARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGA 71
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
+R+ HP+I++ +G ++ + +I E G L+ L +K LDL + + YA +
Sbjct: 67 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 125
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
ARN+L D +K+G++ + + E + + + +A
Sbjct: 126 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 185
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
++ + D+ FG +++L K Q + D + + N E CP L
Sbjct: 186 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 244
Query: 338 QLIAQCTNKDPSKRPTF----AAVIITLEEVSA 366
L+ +C DPS+RP F A + LEE A
Sbjct: 245 SLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 277
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
+R+ HP+I++ +G ++ + +I E G L+ L +K LDL + + YA +
Sbjct: 62 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
ARN+L D +K+G++ + + E + + + +A
Sbjct: 121 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 180
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
++ + D+ FG +++L K Q + D + + N E CP L
Sbjct: 181 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 239
Query: 338 QLIAQCTNKDPSKRPTF----AAVIITLEEVSA 366
L+ +C DPS+RP F A + LEE A
Sbjct: 240 SLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA 272
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
L+ L+H NI+++ G + LI EYLP G+L+ L K K R+D L+Y I
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 142
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
RN+L + + +KIG++ + Q + + ++
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
A L ++K D+ SFG + Y++ + +FM + + + + +
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 262
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + ++ +C N + ++RP+F + + ++++
Sbjct: 263 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
+R+ HP+I++ +G ++ + +I E G L+ L +K LDL + + YA +
Sbjct: 65 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
ARN+L D +K+G++ + + E + + + +A
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
++ + D+ FG +++L K Q + D + + N E CP L
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 242
Query: 338 QLIAQCTNKDPSKRPTFAAVIITLEEV 364
L+ +C DPS+RP F + L +
Sbjct: 243 SLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 78/203 (38%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R+D
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRDDLCGTLDYLPPE 179
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 236
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 237 -RDLISRLLKHNPSQRPMLREVL 258
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
L+ L+H NI+++ G + LI EYLP G+L+ L K K R+D L+Y I
Sbjct: 72 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 131
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
RN+L + + +KIG++ + Q + + ++
Sbjct: 132 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 191
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
A L ++K D+ SFG + Y++ + +FM + + + + +
Sbjct: 192 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 251
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + ++ +C N + ++RP+F + + ++++
Sbjct: 252 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 296
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
+R+ HP+I++ +G ++ + +I E G L+ L +K LDL + + YA +
Sbjct: 65 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 123
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
ARN+L D +K+G++ + + E + + + +A
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
++ + D+ FG +++L K Q + D + + N E CP L
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 242
Query: 338 QLIAQCTNKDPSKRPTFAAVIITLEEV 364
L+ +C DPS+RP F + L +
Sbjct: 243 SLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
L+ L+H NI+++ G + LI EYLP G+L+ L K K R+D L+Y I
Sbjct: 71 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 130
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
RN+L + + +KIG++ + Q + + ++
Sbjct: 131 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 190
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
A L ++K D+ SFG + Y++ + +FM + + + + +
Sbjct: 191 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 250
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + ++ +C N + ++RP+F + + ++++
Sbjct: 251 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 295
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 38/263 (14%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDN--CKLRELRHPNILQFLGS 197
+ G FG KW G VK + ++ P L A N LR+ RH NIL F+G
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKML---NVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 198 IVLGEEMILITEYLPKGNLKG---ILSKKVRL----DLPTALRYALDI------------ 238
++ ++T++ +L I+ K + D+ +D
Sbjct: 73 ST-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLK 131
Query: 239 ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS-SIASNVLDDTKK-------D 290
+ N+ E +KIG++ + + + + Q + + +A V+ K D
Sbjct: 132 SNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSD 191
Query: 291 ICSFGYIFYQMLEGK--HLQTNNSFDFMHLKSVNF-EPKFQISR--CPNRLKQLIAQCTN 345
+ +FG + Y+++ G+ + NN + + + P R CP +K+L+A+C
Sbjct: 192 VYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLK 251
Query: 346 KDPSKRPTFAAVIITLEEVSACL 368
K +RP F ++ ++E ++ L
Sbjct: 252 KKRDERPLFPQILASIELLARSL 274
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
L+ L+H NI+++ G + LI EYLP G+L+ L K K R+D L+Y I
Sbjct: 70 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 129
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
RN+L + + +KIG++ + Q + + ++
Sbjct: 130 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 189
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
A L ++K D+ SFG + Y++ + +FM + + + + +
Sbjct: 190 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 249
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + ++ +C N + ++RP+F + + ++++
Sbjct: 250 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 294
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
L+ L+H NI+++ G + LI EYLP G+L+ L K K R+D L+Y I
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 142
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
RN+L + + +KIG++ + Q + + ++
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
A L ++K D+ SFG + Y++ + +FM + + + + +
Sbjct: 203 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 262
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + ++ +C N + ++RP+F + + ++++
Sbjct: 263 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
L+ L+H NI+++ G + LI EYLP G+L+ L K K R+D L+Y I
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 127
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
RN+L + + +KIG++ + Q + + ++
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
A L ++K D+ SFG + Y++ + +FM + + + + +
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 247
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + ++ +C N + ++RP+F + + ++++
Sbjct: 248 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
L+ L+H NI+++ G + LI EYLP G+L+ L K K R+D L+Y I
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 155
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
RN+L + + +KIG++ + Q + + ++
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 215
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
A L ++K D+ SFG + Y++ + +FM + + + + +
Sbjct: 216 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 275
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + ++ +C N + ++RP+F + + ++++
Sbjct: 276 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
L+ L+H NI+++ G + LI EYLP G+L+ L K K R+D L+Y I
Sbjct: 69 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 128
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
RN+L + + +KIG++ + Q + + ++
Sbjct: 129 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 188
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
A L ++K D+ SFG + Y++ + +FM + + + + +
Sbjct: 189 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 248
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + ++ +C N + ++RP+F + + ++++
Sbjct: 249 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 293
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
L+ L+H NI+++ G + LI EYLP G+L+ L K K R+D L+Y I
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
RN+L + + +KIG++ + Q + + ++
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
A L ++K D+ SFG + Y++ + +FM + + + + +
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + ++ +C N + ++RP+F + + ++++
Sbjct: 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
+R+ HP+I++ +G ++ + +I E G L+ L +K LDL + + YA +
Sbjct: 65 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 123
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
ARN+L D +K+G++ + + E + + + +A
Sbjct: 124 LAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
++ + D+ FG +++L K Q + D + + N E CP L
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 242
Query: 338 QLIAQCTNKDPSKRPTFAAVIITLEEV 364
L+ +C DPS+RP F + L +
Sbjct: 243 SLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
L+ L+H NI+++ G + LI EYLP G+L+ L K K R+D L+Y I
Sbjct: 63 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 122
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
RN+L + + +KIG++ + Q + + ++
Sbjct: 123 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 182
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
A L ++K D+ SFG + Y++ + +FM + + + + +
Sbjct: 183 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 242
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + ++ +C N + ++RP+F + + ++++
Sbjct: 243 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 287
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
L+ L+H NI+++ G + LI EYLP G+L+ L K K R+D L+Y I
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
RN+L + + +KIG++ + Q + + ++
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
A L ++K D+ SFG + Y++ + +FM + + + + +
Sbjct: 185 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + ++ +C N + ++RP+F + + ++++
Sbjct: 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 91/234 (38%), Gaps = 30/234 (12%)
Query: 143 GVFGESQTAKWR--GTWVVKTVIKSHIYHPVKMVLSAKDN-CKLRELRHPNILQFLGSIV 199
G FG + R G + V+K I +K V D L + HP I++ G+
Sbjct: 17 GSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ 76
Query: 200 LGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------ARN 241
+++ +I +Y+ G L +L K R P A YA ++ N
Sbjct: 77 DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPEN 136
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQM 301
+L D+ H+KI ++ + + + + S + D SFG + Y+M
Sbjct: 137 ILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEM 196
Query: 302 LEG----KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR 351
L G T +++ + + F P F +K L+++ +D S+R
Sbjct: 197 LAGYTPFYDSNTMKTYEKILNAELRFPPFFN-----EDVKDLLSRLITRDLSQR 245
>pdb|1MX6|A Chain A, Structure Of P18ink4c (F92n)
pdb|1MX6|B Chain B, Structure Of P18ink4c (F92n)
Length = 168
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 31 LNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKA-NLNLKDRWQRTPLTDAR 89
L +L N++D + LHLAA EGH +VE L+++ A N+ ++ T AR
Sbjct: 86 LQTLLENQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLAR 145
Query: 90 LYGHRDICRILEVNG 104
LYG ++ +++ NG
Sbjct: 146 LYGRNEVVSLMQANG 160
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
L+ L+H NI+++ G + LI EYLP G+L+ L K K R+D L+Y I
Sbjct: 64 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 123
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
RN+L + + +KIG++ + Q + + ++
Sbjct: 124 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 183
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
A L ++K D+ SFG + Y++ + +FM + + + + +
Sbjct: 184 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 243
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + ++ +C N + ++RP+F + + ++++
Sbjct: 244 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 288
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 96/233 (41%), Gaps = 59/233 (25%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
L+ L+H NI+++ G + LI EYLP G+L+ L K K R+D L+Y I
Sbjct: 66 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 125
Query: 239 -----------------ARNLLQDEGDHLKIGEYWV-------QMFYEQIHPNQE----- 269
RN+L + + +KIG++ + + +Y+ P +
Sbjct: 126 KGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY 185
Query: 270 --NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF 327
S S+AS D+ SFG + Y++ + +FM + + + +
Sbjct: 186 APESLTESKFSVAS--------DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 237
Query: 328 QI----------------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
+ CP+ + ++ +C N + ++RP+F + + ++++
Sbjct: 238 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 290
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 96/233 (41%), Gaps = 59/233 (25%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
L+ L+H NI+++ G + LI EYLP G+L+ L K K R+D L+Y I
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 239 -----------------ARNLLQDEGDHLKIGEYWV-------QMFYEQIHPNQE----- 269
RN+L + + +KIG++ + + F++ P +
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY 184
Query: 270 --NSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF 327
S S+AS D+ SFG + Y++ + +FM + + + +
Sbjct: 185 APESLTESKFSVAS--------DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQM 236
Query: 328 QI----------------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
+ CP+ + ++ +C N + ++RP+F + + ++++
Sbjct: 237 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 78/203 (38%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 150
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R+D
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRDDLCGTLDYLPPE 202
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 259
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 260 -RDLISRLLKHNPSQRPMLREVL 281
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 77/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R D
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTDLCGTLDYLPPE 176
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 233
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 234 -RDLISRLLKHNPSQRPMLREVL 255
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 77/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R D
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTDLCGTLDYLPPE 181
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 238
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 239 -RDLISRLLKHNPSQRPMLREVL 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 77/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R D
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTDLCGTLDYLPPE 176
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 233
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 234 -RDLISRLLKHNPSQRPMLREVL 255
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 77/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R D
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTDLCGTLDYLPPE 177
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 178 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 234
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 235 -RDLISRLLKHNPSQRPMLREVL 256
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIA-- 239
++ L HP+I++ +G I+ E +I E P G L L + K L + T + Y+L I
Sbjct: 79 MKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 137
Query: 240 ----------------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
RN+L + +K+G++ + + E + + R ++
Sbjct: 138 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES 197
Query: 284 LD----DTKKDICSFGYIFYQMLE-GKH--LQTNNSFDFMHLKSVNFEPKFQISRCPNRL 336
++ T D+ F +++L GK N L+ + PK + CP L
Sbjct: 198 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL--CPPVL 255
Query: 337 KQLIAQCTNKDPSKRPTFAAVIITLEEV 364
L+ +C + DPS RP F ++ +L +V
Sbjct: 256 YTLMTRCWDYDPSDRPRFTELVCSLSDV 283
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIA-- 239
++ L HP+I++ +G I+ E +I E P G L L + K L + T + Y+L I
Sbjct: 67 MKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 125
Query: 240 ----------------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
RN+L + +K+G++ + + E + + R ++
Sbjct: 126 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES 185
Query: 284 LD----DTKKDICSFGYIFYQMLE-GKH--LQTNNSFDFMHLKSVNFEPKFQISRCPNRL 336
++ T D+ F +++L GK N L+ + PK + CP L
Sbjct: 186 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL--CPPVL 243
Query: 337 KQLIAQCTNKDPSKRPTFAAVIITLEEV 364
L+ +C + DPS RP F ++ +L +V
Sbjct: 244 YTLMTRCWDYDPSDRPRFTELVCSLSDV 271
>pdb|1BU9|A Chain A, Solution Structure Of P18-Ink4c, 21 Structures
pdb|1G3N|B Chain B, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|F Chain F, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 168
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 42 NVQDYDKRTALHLAASEGHAPIVELLLQYKA-NLNLKDRWQRTPLTDARLYGHRDICRIL 100
N++D + LHLAA EGH +VE L+++ A N+ ++ T ARLYG ++ ++
Sbjct: 97 NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Query: 101 EVNG 104
+ NG
Sbjct: 157 QANG 160
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 33/117 (28%)
Query: 17 GNFL-SFASRGD---------------------RVGLNQM-----------LREGTSPNV 43
GN L S A+RGD R L M L G +P++
Sbjct: 6 GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDL 65
Query: 44 QDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
+D +H AA G ++ LL+++A++N++D PL A GH + L
Sbjct: 66 KDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 122
>pdb|1MX4|A Chain A, Structure Of P18ink4c (F82q)
pdb|1MX4|B Chain B, Structure Of P18ink4c (F82q)
Length = 168
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 42 NVQDYDKRTALHLAASEGHAPIVELLLQYKA-NLNLKDRWQRTPLTDARLYGHRDICRIL 100
N++D + LHLAA EGH +VE L+++ A N+ ++ T ARLYG ++ ++
Sbjct: 97 NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Query: 101 EVNG 104
+ NG
Sbjct: 157 QANG 160
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 33/117 (28%)
Query: 17 GNFL-SFASRGD---------------------RVGLNQM-----------LREGTSPNV 43
GN L S A+RGD R L M L G +P++
Sbjct: 6 GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDL 65
Query: 44 QDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
+D +H AA G ++ LL+++A++N++D PL A GH + L
Sbjct: 66 KDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 122
>pdb|1IHB|A Chain A, Crystal Structure Of P18-Ink4c(Ink6)
pdb|1IHB|B Chain B, Crystal Structure Of P18-Ink4c(Ink6)
Length = 162
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 42 NVQDYDKRTALHLAASEGHAPIVELLLQYKA-NLNLKDRWQRTPLTDARLYGHRDICRIL 100
N++D + LHLAA EGH +VE L+++ A N+ ++ T ARLYG ++ ++
Sbjct: 97 NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Query: 101 EVNG 104
+ NG
Sbjct: 157 QANG 160
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 33/117 (28%)
Query: 17 GNFL-SFASRGD---------------------RVGLNQM-----------LREGTSPNV 43
GN L S A+RGD R L M L G +P++
Sbjct: 6 GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDL 65
Query: 44 QDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
+D +H AA G ++ LL+++A++N++D PL A GH + L
Sbjct: 66 KDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 122
>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c
pdb|1MX2|B Chain B, Structure Of F71n Mutant Of P18ink4c
Length = 168
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 42 NVQDYDKRTALHLAASEGHAPIVELLLQYKA-NLNLKDRWQRTPLTDARLYGHRDICRIL 100
N++D + LHLAA EGH +VE L+++ A N+ ++ T ARLYG ++ ++
Sbjct: 97 NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLM 156
Query: 101 EVNG 104
+ NG
Sbjct: 157 QANG 160
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 33/117 (28%)
Query: 17 GNFL-SFASRGD---------------------RVGLNQM-----------LREGTSPNV 43
GN L S A+RGD R L M L G +P++
Sbjct: 6 GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDL 65
Query: 44 QDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
+D +H AA G ++ LL+++A++N++D PL A GH + L
Sbjct: 66 KDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 122
>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar
Affinity To Her2
pdb|2JAB|B Chain B, A Designed Ankyrin Repeat Protein Evolved To Picomolar
Affinity To Her2
pdb|2JAB|C Chain C, A Designed Ankyrin Repeat Protein Evolved To Picomolar
Affinity To Her2
Length = 136
Score = 45.4 bits (106), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A + D V + ++ G N +D T L+LA + GH IVE+LL+ A++N D
Sbjct: 24 AGQDDEVRI--LMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGF 81
Query: 83 TPLTDARLYGHRDICRILEVNGG 105
TPL A GH +I +L +G
Sbjct: 82 TPLHLAAFIGHLEIAEVLLKHGA 104
Score = 45.1 bits (105), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G N D T LHLAA GH I E+LL++ A++N +D++ +T + G+
Sbjct: 66 LLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGN 125
Query: 94 RDICRILE 101
D+ IL+
Sbjct: 126 EDLAEILQ 133
Score = 35.0 bits (79), Expect = 0.080, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 55 AASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGG 105
AA G V +L+ A++N KD + TPL A +GH +I +L NG
Sbjct: 21 AARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGA 71
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
+R+ HP+I++ +G ++ + +I E G L+ L +K LDL + + YA +
Sbjct: 445 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
ARN+L D +K+G++ + + E + + + +A
Sbjct: 504 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
++ + D+ FG +++L K Q + D + + N E CP L
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 622
Query: 338 QLIAQCTNKDPSKRPTFAAVIITLEEV 364
L+ +C DPS+RP F + L +
Sbjct: 623 SLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 74/196 (37%), Gaps = 42/196 (21%)
Query: 203 EMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI------------------ARNLL 243
E+ L+ EYLP G L+ L + + RLD L Y+ I ARN+L
Sbjct: 84 ELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 143
Query: 244 QDEGDHLKIGEYWVQMFYEQ-------IHPNQENSQRNDNSSIASNVLDDTKKDICSFGY 296
+ H+KI ++ + P Q S++ N+ + D+ SFG
Sbjct: 144 VESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF-SRQSDVWSFGV 202
Query: 297 IFYQMLEGKHLQTNNSFDFMHLKSVNFE-PKF--------------QISRCPNRLKQLIA 341
+ Y++ + S +F+ + + P CP + +L+
Sbjct: 203 VLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMK 262
Query: 342 QCTNKDPSKRPTFAAV 357
C P RP+F+A+
Sbjct: 263 LCWAPSPQDRPSFSAL 278
>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin
Repeat Domain Of Varp
Length = 269
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 19/125 (15%)
Query: 21 SFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRW 80
+ R D + L +L+ G + ++ D+ LHLA +GH +V+ LL A N KD
Sbjct: 94 ALHGRADLIPL--LLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLS 151
Query: 81 QRTPLTDARLYGHRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMV 140
TPL A GH ++ +L H + N K + LH +++
Sbjct: 152 GNTPLIYACSGGHHELVALL-------LQHGASINASNNKGN----------TALHEAVI 194
Query: 141 EQGVF 145
E+ VF
Sbjct: 195 EKHVF 199
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L PN +D T L A S GH +V LLLQ+ A++N + T L +A + H
Sbjct: 138 LLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKH 197
Query: 94 RDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISEL 132
+ +L ++G + ++ R D E N I EL
Sbjct: 198 VFVVELLLLHGASVQVLNK--RQRTAVDCAEQNSKIMEL 234
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 77/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P+G + L K + D Y ++A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 181
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 238
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 239 -RDLISRLLKHNPSQRPMLREVL 260
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 29/208 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDIA-- 239
++ L HP+I++ +G I+ E +I E P G L L + K L + T + Y+L I
Sbjct: 63 MKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 121
Query: 240 ----------------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
RN+L + +K+G++ + + E + + R ++
Sbjct: 122 MAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPES 181
Query: 284 LD----DTKKDICSFGYIFYQMLE-GKH--LQTNNSFDFMHLKSVNFEPKFQISRCPNRL 336
++ T D+ F +++L GK N L+ + PK + CP L
Sbjct: 182 INFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDL--CPPVL 239
Query: 337 KQLIAQCTNKDPSKRPTFAAVIITLEEV 364
L+ +C + DPS RP F ++ +L +V
Sbjct: 240 YTLMTRCWDYDPSDRPRFTELVCSLSDV 267
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 74/201 (36%), Gaps = 38/201 (18%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P+G + L K + D Y ++A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRNDNS------SIA 280
NLL LKI ++ W +H + +
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRXXLXGTLDYLPPEMI 183
Query: 281 SNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNRLK 337
+ D K D+ S G + Y+ L GK N++ + + V F P F +
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----R 239
Query: 338 QLIAQCTNKDPSKRPTFAAVI 358
LI++ +PS+RP V+
Sbjct: 240 DLISRLLKHNPSQRPMLREVL 260
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI++ G + + ++++TEY+ G+L L K ++L + +
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 147
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 148 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 206
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
+ + D+ S+G + ++++ E + + +N D + + P
Sbjct: 207 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 262
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP L QL+ C KD + RP F ++ L+++
Sbjct: 263 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain
Fold
Length = 92
Score = 45.1 bits (105), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
++ G +D + T LHLAA GH +V+LLL+ A++N +D++ +T + G+
Sbjct: 25 LMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISIDNGN 84
Query: 94 RDICRILE 101
D+ IL+
Sbjct: 85 EDLAEILQ 92
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI++ G + + ++++TEY+ G+L L K ++L + +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 189
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
+ + D+ S+G + ++++ E + + +N D + + P
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 245
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP L QL+ C KD + RP F ++ L+++
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 27/207 (13%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDI--- 238
+R+ HP+I++ +G ++ + +I E G L+ L +K LDL + + YA +
Sbjct: 445 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
ARN+L D +K+G++ + + E + + + +A
Sbjct: 504 LAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
Query: 284 LD----DTKKDICSFGYIFYQMLEG--KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLK 337
++ + D+ FG +++L K Q + D + + N E CP L
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLPMPPNCPPTLY 622
Query: 338 QLIAQCTNKDPSKRPTFAAVIITLEEV 364
L+ +C DPS+RP F + L +
Sbjct: 623 SLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI++ G + + ++++TEY+ G+L L K ++L + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
+ + D+ S+G + ++++ E + + +N D + + P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP L QL+ C KD + RP F ++ L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI++ G + + ++++TEY+ G+L L K ++L + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
+ + D+ S+G + ++++ E + + +N D + + P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP L QL+ C KD + RP F ++ L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI++ G + + ++++TEY+ G+L L K ++L + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
+ + D+ S+G + ++++ E + + +N D + + P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP L QL+ C KD + RP F ++ L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI++ G + + ++++TEY+ G+L L K ++L + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 160 MKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
+ + D+ S+G + ++++ E + + +N D + + P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP L QL+ C KD + RP F ++ L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 75/204 (36%), Gaps = 44/204 (21%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRNDN---------S 277
NLL LKI ++ W +H S R D
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVHA---PSSRRDTLCGTLDYLPP 176
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPN 334
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA-- 234
Query: 335 RLKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 235 --RDLISRLLKHNPSQRPMLREVL 256
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI++ G + + ++++TEY+ G+L L K ++L + +
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 157
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 158 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 216
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
+ + D+ S+G + ++++ E + + +N D + + P
Sbjct: 217 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 272
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP L QL+ C KD + RP F ++ L+++
Sbjct: 273 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI++ G + + ++++TEY+ G+L L K ++L + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
+ + D+ S+G + ++++ E + + +N D + + P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP L QL+ C KD + RP F ++ L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 95/225 (42%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI- 238
L+ L+H NI+++ G + LI E+LP G+L+ L K K R+D L+Y I
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQIC 127
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
RN+L + + +KIG++ + Q + + ++
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
A L ++K D+ SFG + Y++ + +FM + + + + +
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 247
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + ++ +C N + ++RP+F + + ++++
Sbjct: 248 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI++ G + + ++++TEY+ G+L L K ++L + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
+ + D+ S+G + ++++ E + + +N D + + P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP L QL+ C KD + RP F ++ L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 77/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTELCGTLDYLPPE 176
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 233
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 234 -RDLISRLLKHNPSQRPMLREVL 255
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 91/218 (41%), Gaps = 44/218 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPN++ G + +++ITE++ G+L L + ++L +
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 121
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + F E + S S++ +
Sbjct: 122 MKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLED-----DTSDPTYTSALGGKI 176
Query: 284 LD-------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN-FEPKFQI 329
+ D+ S+G + ++++ +D + +N E +++
Sbjct: 177 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS---YGERPYWDMTNQDVINAIEQDYRL 233
Query: 330 S---RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ L QL+ C KD + RP F ++ TL+++
Sbjct: 234 PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 90/213 (42%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI++ G + + ++++TEY+ G+L L K ++L + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
+ + D+ S+G + ++++ E + + +N D + + P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP L QL+ C KD + RP F ++ L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 91/218 (41%), Gaps = 44/218 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPN++ G + +++ITE++ G+L L + ++L +
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAG 147
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + F E + S S++ +
Sbjct: 148 MKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED-----DTSDPTYTSALGGKI 202
Query: 284 LD-------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN-FEPKFQI 329
+ D+ S+G + ++++ +D + +N E +++
Sbjct: 203 PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS---YGERPYWDMTNQDVINAIEQDYRL 259
Query: 330 S---RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ L QL+ C KD + RP F ++ TL+++
Sbjct: 260 PPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 95/242 (39%), Gaps = 37/242 (15%)
Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIVL 200
G FGE W G + T + P M + A ++ ++ L+H +++ +
Sbjct: 24 GQFGEV----WMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 201 GEEMILITEYLPKGNLKGILS--KKVRLDLPTALRYALDIAR------------------ 240
E + +ITEY+ KG+L L + ++ LP + ++ IA
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAA 139
Query: 241 NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGY 296
N+L E KI ++ + E + A ++ K D+ SFG
Sbjct: 140 NVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGI 199
Query: 297 IFYQMLEGKHL----QTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRP 352
+ Y+++ + +TN D M S + ++ CP+ L ++ C + +RP
Sbjct: 200 LLYEIVTYGKIPYPGRTNA--DVMTALSQGYRMP-RVENCPDELYDIMKMCWKEKAEERP 256
Query: 353 TF 354
TF
Sbjct: 257 TF 258
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 87/212 (41%), Gaps = 34/212 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI+ G + + +++ITEY+ G+L L K ++L + +
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 122
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 123 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGGKIPIRWTA 181
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL-KSVNFEPKFQISRC 332
+ + D+ S+G + ++++ E + +N + + P C
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMD---C 238
Query: 333 PNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
P L QL+ C K+ S RP F ++ L+++
Sbjct: 239 PIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 87/212 (41%), Gaps = 34/212 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI+ G + + +++ITEY+ G+L L K ++L + +
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 143
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 144 MKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGGKIPIRWTA 202
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL-KSVNFEPKFQISRC 332
+ + D+ S+G + ++++ E + +N + + P C
Sbjct: 203 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMD---C 259
Query: 333 PNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
P L QL+ C K+ S RP F ++ L+++
Sbjct: 260 PIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 64 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 123
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R
Sbjct: 124 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 175
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 176 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 232
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 233 -RDLISRLLKHNPSQRPMLREVL 254
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 128
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R
Sbjct: 129 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 180
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 237
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 238 -RDLISRLLKHNPSQRPMLREVL 259
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 87/212 (41%), Gaps = 34/212 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI+ G + + +++ITEY+ G+L L K ++L + +
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSG 128
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 129 MKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLED-DPEAAYTTRGGKIPIRWTA 187
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL-KSVNFEPKFQISRC 332
+ + D+ S+G + ++++ E + +N + + P C
Sbjct: 188 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMD---C 244
Query: 333 PNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
P L QL+ C K+ S RP F ++ L+++
Sbjct: 245 PIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 62 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 121
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R
Sbjct: 122 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 173
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 174 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 230
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 231 -RDLISRLLKHNPSQRPMLREVL 252
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 34/248 (13%)
Query: 143 GVFGESQTAKWRG------TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLG 196
G FG + +W + VK + + P M ++ + L H N+++ G
Sbjct: 29 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 88
Query: 197 SIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI----------------- 238
+VL M ++TE P G+L L K + L T RYA+ +
Sbjct: 89 -VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 147
Query: 239 -ARNLLQDEGDHLKIGEYWVQMFYEQ--IHPNQENSQRNDNSSIASNVLD----DTKKDI 291
ARNLL D +KIG++ + Q H + ++ + A L D
Sbjct: 148 AARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDT 207
Query: 292 CSFGYIFYQMLE-GKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS 349
FG ++M G+ N +H E + CP + ++ QC P
Sbjct: 208 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPE 267
Query: 350 KRPTFAAV 357
RPTF A+
Sbjct: 268 DRPTFVAL 275
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTXLCGTLDYLPPE 176
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 233
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 234 -RDLISRLLKHNPSQRPMLREVL 255
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 176
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 233
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 234 -RDLISRLLKHNPSQRPMLREVL 255
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 179
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 236
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 237 -RDLISRLLKHNPSQRPMLREVL 258
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 75/201 (37%), Gaps = 38/201 (18%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIH-PNQENSQRNDN-----SSIA 280
NLL LKI ++ W +H P+ + +
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRAALCGTLDYLPPEMI 178
Query: 281 SNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNRLK 337
+ D K D+ S G + Y+ L GK N++ + + V F P F +
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----R 234
Query: 338 QLIAQCTNKDPSKRPTFAAVI 358
LI++ +PS+RP V+
Sbjct: 235 DLISRLLKHNPSQRPMLREVL 255
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 84/227 (37%), Gaps = 61/227 (26%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNL-KGILSKKVRLDLPTALRYALDIARN 241
+ L HPNI++ G + M++ E++P G+L +L K + LR LDIA
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLD----------- 285
+ EY +H PN ++N+ + + V D
Sbjct: 135 I-----------EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSV 183
Query: 286 ----------------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN- 322
K D SF I Y +L G+ + + + +K +N
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE--GPFDEYSYGKIKFINM 241
Query: 323 -----FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
P CP RL+ +I C + DP KRP F+ ++ L E+
Sbjct: 242 IREEGLRPTIP-EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 71/195 (36%), Gaps = 26/195 (13%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 66 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRNDNSSIASNVLDD 286
NLL LKI ++ W + + + D
Sbjct: 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHD 185
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNRLKQLIAQC 343
K D+ S G + Y+ L GK N++ + + V F P F + LI++
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----RDLISRL 241
Query: 344 TNKDPSKRPTFAAVI 358
+PS+RP V+
Sbjct: 242 LKHNPSQRPMLREVL 256
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 93/225 (41%), Gaps = 43/225 (19%)
Query: 183 LRELRHPNILQFLGSIVLG--EEMILITEYLPKGNLKGILSKKV-RLDLPTALRYALDI- 238
L+ L+H NI+++ G + LI EYLP G+L+ L R+D L+Y I
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQIC 127
Query: 239 -----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI-- 279
RN+L + + +KIG++ + Q + + ++
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 280 ASNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQI------ 329
A L ++K D+ SFG + Y++ + +FM + + + + +
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 247
Query: 330 ----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + ++ +C N + ++RP+F + + ++++
Sbjct: 248 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 75/201 (37%), Gaps = 38/201 (18%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIH-PNQENSQRNDN-----SSIA 280
NLL LKI ++ W +H P+ + +
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRAALCGTLDYLPPEMI 181
Query: 281 SNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNRLK 337
+ D K D+ S G + Y+ L GK N++ + + V F P F +
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA----R 237
Query: 338 QLIAQCTNKDPSKRPTFAAVI 358
LI++ +PS+RP V+
Sbjct: 238 DLISRLLKHNPSQRPMLREVL 258
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 34/248 (13%)
Query: 143 GVFGESQTAKWRG------TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLG 196
G FG + +W + VK + + P M ++ + L H N+++ G
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 78
Query: 197 SIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI----------------- 238
+VL M ++TE P G+L L K + L T RYA+ +
Sbjct: 79 -VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 137
Query: 239 -ARNLLQDEGDHLKIGEYWVQMFYEQ--IHPNQENSQRNDNSSIASNVLD----DTKKDI 291
ARNLL D +KIG++ + Q H + ++ + A L D
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 292 CSFGYIFYQMLE-GKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS 349
FG ++M G+ N +H E + CP + ++ QC P
Sbjct: 198 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPE 257
Query: 350 KRPTFAAV 357
RPTF A+
Sbjct: 258 DRPTFVAL 265
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 86/223 (38%), Gaps = 42/223 (18%)
Query: 183 LRELRHPNILQFLGSI--VLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI-- 238
LR L H +I+++ G + L+ EY+P G+L+ L + + L L +A I
Sbjct: 87 LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICE 145
Query: 239 ----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI--A 280
ARN+L D +KIG++ + + H + D+ A
Sbjct: 146 GMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYA 205
Query: 281 SNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN------------FE 324
L + K D+ SFG Y++L + F+ L + E
Sbjct: 206 PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265
Query: 325 PKFQISR---CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
++ R CP + L+ C + S RPTF +I L+ V
Sbjct: 266 RGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308
>pdb|1DC2|A Chain A, Solution Nmr Structure Of Tumor Suppressor P16ink4a, 20
Structures
pdb|1A5E|A Chain A, Solution Nmr Structure Of Tumor Suppressor P16ink4a, 18
Structures
pdb|2A5E|A Chain A, Solution Nmr Structure Of Tumor Suppressor P16ink4a,
Restrained Minimized Mean Structure
Length = 156
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 13/99 (13%)
Query: 34 MLREGTSPNVQDYDKRT-ALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYG 92
+L G PN D T +H AA EG + +L + A L+++D W R P+ A G
Sbjct: 63 LLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELG 122
Query: 93 HRDICRILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISE 131
HRD+ R L G + SN D +E
Sbjct: 123 HRDVARYLRAAAG------------GTRGSNHARIDAAE 149
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 179
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 236
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 237 -RDLISRLLKHNPSQRPMLREVL 258
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 84/227 (37%), Gaps = 61/227 (26%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNL-KGILSKKVRLDLPTALRYALDIARN 241
+ L HPNI++ G + M++ E++P G+L +L K + LR LDIA
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLD----------- 285
+ EY +H PN ++N+ + + V D
Sbjct: 135 I-----------EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSV 183
Query: 286 ----------------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN- 322
K D SF I Y +L G+ + + + +K +N
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE--GPFDEYSYGKIKFINM 241
Query: 323 -----FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
P CP RL+ +I C + DP KRP F+ ++ L E+
Sbjct: 242 IREEGLRPTIP-EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 95/248 (38%), Gaps = 35/248 (14%)
Query: 139 MVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
+V +G FG AKWR V I+S +V + +L + HPNI++ G+
Sbjct: 16 VVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIV----ELRQLSRVNHPNIVKLYGAC 71
Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPT---ALRYALDIARN-------------- 241
+ + L+ EY G+L +L L T A+ + L ++
Sbjct: 72 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 242 --------LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICS 293
LL G LKI ++ + N + S + K D+ S
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFS 189
Query: 294 FGYIFYQMLEGKHL---QTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSK 350
+G I ++++ + +F M P I P ++ L+ +C +KDPS+
Sbjct: 190 WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL-IKNLPKPIESLMTRCWSKDPSQ 248
Query: 351 RPTFAAVI 358
RP+ ++
Sbjct: 249 RPSMEEIV 256
>pdb|1BI7|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
Length = 156
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 34 MLREGTSPNVQDYDKRT-ALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYG 92
+L G PN D T +H AA EG + +L + A L+++D W R P+ A G
Sbjct: 63 LLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELG 122
Query: 93 HRDICRILEVNGG 105
HRD+ R L G
Sbjct: 123 HRDVARYLRAAAG 135
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 181
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 182 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 238
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 239 -RDLISRLLKHNPSQRPMLREVL 260
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 84/227 (37%), Gaps = 61/227 (26%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNL-KGILSKKVRLDLPTALRYALDIARN 241
+ L HPNI++ G + M++ E++P G+L +L K + LR LDIA
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIH-----PNQENSQRNDNSSIASNVLD----------- 285
+ EY +H PN ++N+ + + V D
Sbjct: 135 I-----------EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSV 183
Query: 286 ----------------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN- 322
K D SF I Y +L G+ + + + +K +N
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE--GPFDEYSYGKIKFINM 241
Query: 323 -----FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
P CP RL+ +I C + DP KRP F+ ++ L E+
Sbjct: 242 IREEGLRPTIP-EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 95/248 (38%), Gaps = 35/248 (14%)
Query: 139 MVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSI 198
+V +G FG AKWR V I+S +V + +L + HPNI++ G+
Sbjct: 15 VVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIV----ELRQLSRVNHPNIVKLYGAC 70
Query: 199 VLGEEMILITEYLPKGNLKGILSKKVRLDLPT---ALRYALDIARN-------------- 241
+ + L+ EY G+L +L L T A+ + L ++
Sbjct: 71 L--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 242 --------LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTKKDICS 293
LL G LKI ++ + N + S + K D+ S
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFS 188
Query: 294 FGYIFYQMLEGKHL---QTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSK 350
+G I ++++ + +F M P I P ++ L+ +C +KDPS+
Sbjct: 189 WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL-IKNLPKPIESLMTRCWSKDPSQ 247
Query: 351 RPTFAAVI 358
RP+ ++
Sbjct: 248 RPSMEEIV 255
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 65 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R
Sbjct: 125 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRXXLCGTLDYLPPE 176
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 177 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 233
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 234 -RDLISRLLKHNPSQRPMLREVL 255
>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein
pdb|2RFM|B Chain B, Structure Of A Thermophilic Ankyrin Repeat Protein
Length = 192
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 20 LSFASRGDRVGL-NQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L +A + +R+G+ ++L +G++ N +D+ +T L + G++ + LL++ AN+N ++
Sbjct: 72 LIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRN 131
Query: 79 RWQRTPLTDARLYGHRDICRIL 100
TPL A YG +I + L
Sbjct: 132 LEGETPLIVASKYGRSEIVKKL 153
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 44 QDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVN 103
+D + TAL A I E LL +N+N KD +TPL + ++G+ ++ L +
Sbjct: 64 KDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEH 123
Query: 104 GG----KDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQT 150
G ++ + PL V ++ +E+ + EL S+ G+ E+
Sbjct: 124 GANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASA 174
>pdb|1YMP|A Chain A, The Crystal Structure Of A Partial Mouse Notch-1 Ankyrin
Domain: Repeats 4 Through 7 Preserve An Ankyrin Fold
pdb|1YMP|B Chain B, The Crystal Structure Of A Partial Mouse Notch-1 Ankyrin
Domain: Repeats 4 Through 7 Preserve An Ankyrin Fold
Length = 135
Score = 43.1 bits (100), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G + ++Q+ + T L LAA EG ++LL + AN ++ D R P A+ H
Sbjct: 67 LLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 126
Query: 94 RDICRILE 101
DI R+L+
Sbjct: 127 HDIVRLLD 134
>pdb|1D9S|A Chain A, Tumor Suppressor P15(Ink4b) Structure By Comparative
Modeling And Nmr Data
Length = 136
Score = 43.1 bits (100), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 34 MLREGTSPNVQDYDKRT-ALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYG 92
+L G PN D T +H AA EG + +L + A L++ D W R P+ A G
Sbjct: 63 LLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQG 122
Query: 93 HRDICRILEVNGG 105
HRDI R L G
Sbjct: 123 HRDIARYLHAATG 135
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 104/242 (42%), Gaps = 38/242 (15%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
+ QG G TA T + + ++ K L + +RE ++PNI+ +L S +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 200 LGEEMILITEYLPKGNLKGILSKKVRLD--LPTALRYAL--------------DI-ARNL 242
+G+E+ ++ EYL G+L ++++ + + R L DI + N+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147
Query: 243 LQDEGDHLKIGEYWVQMFYEQIHPNQENSQRND--------NSSIASNVLDDTKKDICSF 294
L +K+ ++ F QI P Q S+R++ + + K DI S
Sbjct: 148 LLGMDGSVKLTDFG---FCAQITPEQ--SKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 295 GYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRL----KQLIAQCTNKDPS 349
G + +M+EG+ N N ++L + N P+ Q P +L + + +C + D
Sbjct: 203 GIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ---NPEKLSAIFRDFLNRCLDMDVE 259
Query: 350 KR 351
KR
Sbjct: 260 KR 261
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 75/201 (37%), Gaps = 38/201 (18%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 65 LRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIH-PNQENSQRNDN-----SSIA 280
NLL LKI ++ W +H P+ + +
Sbjct: 125 HSKKVIHRDIKPENLLLGSAGELKIADFGW------SVHAPSSRRAALCGTLDYLPPEMI 178
Query: 281 SNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNRLK 337
+ D K D+ S G + Y+ L GK N++ + + V F P F +
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGA----R 234
Query: 338 QLIAQCTNKDPSKRPTFAAVI 358
LI++ +PS+RP V+
Sbjct: 235 DLISRLLKHNPSQRPMLREVL 255
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 89/221 (40%), Gaps = 42/221 (19%)
Query: 183 LRELRHPNILQFLGSIV-LGEEMI-LITEYLPKGNLKGILSKKVRLDLPTALRYALDI-- 238
LR L H +I+++ G GE+ + L+ EY+P G+L+ L + + L L +A I
Sbjct: 65 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICE 123
Query: 239 ----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI--A 280
ARN+L D +KIG++ + + H + D+ A
Sbjct: 124 GMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 183
Query: 281 SNVLDDTK----KDICSFGYIFYQML------EGKHLQ-------TNNSFDFMHLKSV-- 321
L + K D+ SFG Y++L + H + T + L +
Sbjct: 184 PECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLE 243
Query: 322 NFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE 362
E + RCP + L+ C + S RPTF ++ L+
Sbjct: 244 RGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQ 284
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 150
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R
Sbjct: 151 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 202
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 203 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 259
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 260 -RDLISRLLKHNPSQRPMLREVL 281
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 89/223 (39%), Gaps = 42/223 (18%)
Query: 183 LRELRHPNILQFLGSIV-LGEEMI-LITEYLPKGNLKGILSKKVRLDLPTALRYALDI-- 238
LR L H +I+++ G GE+ + L+ EY+P G+L+ L + + L L +A I
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICE 128
Query: 239 ----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI--A 280
ARN+L D +KIG++ + + H + D+ A
Sbjct: 129 GMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 188
Query: 281 SNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN------------FE 324
L + K D+ SFG Y++L + F+ L + E
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 248
Query: 325 PKFQISR---CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
++ R CP + L+ C + S RPTF +I L+ V
Sbjct: 249 RGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 89/223 (39%), Gaps = 42/223 (18%)
Query: 183 LRELRHPNILQFLGSIV-LGEEMI-LITEYLPKGNLKGILSKKVRLDLPTALRYALDI-- 238
LR L H +I+++ G GE+ + L+ EY+P G+L+ L + + L L +A I
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICE 128
Query: 239 ----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI--A 280
ARN+L D +KIG++ + + H + D+ A
Sbjct: 129 GMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 188
Query: 281 SNVLDDTK----KDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN------------FE 324
L + K D+ SFG Y++L + F+ L + E
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 248
Query: 325 PKFQISR---CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
++ R CP + L+ C + S RPTF +I L+ V
Sbjct: 249 RGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 89/221 (40%), Gaps = 42/221 (19%)
Query: 183 LRELRHPNILQFLGSIV-LGEEMI-LITEYLPKGNLKGILSKKVRLDLPTALRYALDI-- 238
LR L H +I+++ G GE+ + L+ EY+P G+L+ L + + L L +A I
Sbjct: 64 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICE 122
Query: 239 ----------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSI--A 280
ARN+L D +KIG++ + + H + D+ A
Sbjct: 123 GMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 182
Query: 281 SNVLDDTK----KDICSFGYIFYQML------EGKHLQ-------TNNSFDFMHLKSV-- 321
L + K D+ SFG Y++L + H + T + L +
Sbjct: 183 PECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLE 242
Query: 322 NFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLE 362
E + RCP + L+ C + S RPTF ++ L+
Sbjct: 243 RGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQ 283
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRXXLCGTLDYLPPE 179
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 236
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 237 -RDLISRLLKHNPSQRPMLREVL 258
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 34/248 (13%)
Query: 143 GVFGESQTAKWRG------TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLG 196
G FG + +W + VK + + P M ++ + L H N+++ G
Sbjct: 29 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 88
Query: 197 SIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI----------------- 238
+VL M ++TE P G+L L K + L T RYA+ +
Sbjct: 89 -VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 147
Query: 239 -ARNLLQDEGDHLKIGEYWVQMFYEQ--IHPNQENSQRNDNSSIASNVLD----DTKKDI 291
ARNLL D +KIG++ + Q H + ++ + A L D
Sbjct: 148 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 207
Query: 292 CSFGYIFYQMLE-GKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS 349
FG ++M G+ N +H E + CP + ++ QC P
Sbjct: 208 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPE 267
Query: 350 KRPTFAAV 357
RPTF A+
Sbjct: 268 DRPTFVAL 275
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 82 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 141
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R
Sbjct: 142 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 193
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 194 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 250
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 251 -RDLISRLLKHNPSQRPMLREVL 272
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 34/248 (13%)
Query: 143 GVFGESQTAKWRG------TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLG 196
G FG + +W + VK + + P M ++ + L H N+++ G
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 78
Query: 197 SIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI----------------- 238
+VL M ++TE P G+L L K + L T RYA+ +
Sbjct: 79 -VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 137
Query: 239 -ARNLLQDEGDHLKIGEYWVQMFYEQ--IHPNQENSQRNDNSSIASNVLD----DTKKDI 291
ARNLL D +KIG++ + Q H + ++ + A L D
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 292 CSFGYIFYQMLE-GKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS 349
FG ++M G+ N +H E + CP + ++ QC P
Sbjct: 198 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPE 257
Query: 350 KRPTFAAV 357
RPTF A+
Sbjct: 258 DRPTFVAL 265
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 93/249 (37%), Gaps = 36/249 (14%)
Query: 143 GVFGESQTAKWRG------TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLG 196
G FG + +W + VK + + P M ++ + L H N+++ G
Sbjct: 23 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 82
Query: 197 SIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI----------------- 238
+VL M ++TE P G+L L K + L T RYA+ +
Sbjct: 83 -VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 141
Query: 239 -ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLDDTK-------KD 290
ARNLL D +KIG++ + Q + + Q + A + K D
Sbjct: 142 AARNLLLATRDLVKIGDFGLMRALPQ-NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASD 200
Query: 291 ICSFGYIFYQMLE-GKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDP 348
FG ++M G+ N +H E + CP + ++ QC P
Sbjct: 201 TWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKP 260
Query: 349 SKRPTFAAV 357
RPTF A+
Sbjct: 261 EDRPTFVAL 269
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 76/203 (37%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRRXXLCGTLDYLPPE 178
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 235
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 236 -RDLISRLLKHNPSQRPMLREVL 257
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 34/248 (13%)
Query: 143 GVFGESQTAKWRG------TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLG 196
G FG + +W + VK + + P M ++ + L H N+++ G
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 78
Query: 197 SIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI----------------- 238
+VL M ++TE P G+L L K + L T RYA+ +
Sbjct: 79 -VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 137
Query: 239 -ARNLLQDEGDHLKIGEYWVQMFYEQ--IHPNQENSQRNDNSSIASNVLD----DTKKDI 291
ARNLL D +KIG++ + Q H + ++ + A L D
Sbjct: 138 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 197
Query: 292 CSFGYIFYQMLE-GKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS 349
FG ++M G+ N +H E + CP + ++ QC P
Sbjct: 198 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPE 257
Query: 350 KRPTFAAV 357
RPTF A+
Sbjct: 258 DRPTFVAL 265
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 75/203 (36%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 68 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI + W +H +S+R
Sbjct: 128 HSKRVIHRDIKPENLLLGSAGELKIANFGW------SVH--APSSRRTTLCGTLDYLPPE 179
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 180 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 236
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 237 -RDLISRLLKHNPSQRPMLREVL 258
>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain
Fold
Length = 110
Score = 42.7 bits (99), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A + D V + ++ G +D + T LHLAA GH +V+LLL+ A++ +D++ +
Sbjct: 34 AGQDDEVRI--LMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGK 91
Query: 83 TPLTDARLYGHRDICRILE 101
T + G+ D+ IL+
Sbjct: 92 TAFDISIDNGNEDLAEILQ 110
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/214 (20%), Positives = 93/214 (43%), Gaps = 38/214 (17%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK-----------VRLDLPTA 231
+ + H NI++ G I + M++ITEY+ G L L +K + +
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y ++ ARN+L + K+ ++ + E P + I
Sbjct: 160 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED-DPEATYTTSGGKIPIRWTA 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHLKSVNFEPKFQISR-- 331
+ + D+ SFG + ++++ E + + +N +K++N F++
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH---EVMKAIN--DGFRLPTPM 273
Query: 332 -CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + QL+ QC ++ ++RP FA ++ L+++
Sbjct: 274 DCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 34/248 (13%)
Query: 143 GVFGESQTAKWRG------TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLG 196
G FG + +W + VK + + P M ++ + L H N+++ G
Sbjct: 23 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 82
Query: 197 SIVLGEEMILITEYLPKGNLKGILSK-KVRLDLPTALRYALDI----------------- 238
+VL M ++TE P G+L L K + L T RYA+ +
Sbjct: 83 -VVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 141
Query: 239 -ARNLLQDEGDHLKIGEYWVQMFYEQ--IHPNQENSQRNDNSSIASNVLD----DTKKDI 291
ARNLL D +KIG++ + Q H + ++ + A L D
Sbjct: 142 AARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDT 201
Query: 292 CSFGYIFYQMLE-GKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPS 349
FG ++M G+ N +H E + CP + ++ QC P
Sbjct: 202 WMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPE 261
Query: 350 KRPTFAAV 357
RPTF A+
Sbjct: 262 DRPTFVAL 269
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 87/236 (36%), Gaps = 66/236 (27%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS--KKVRLDLP--TALRYALDI 238
L++L HPN++++ S + E+ ++ E G+L ++ KK + +P T +Y + +
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 239 AR------------------NLLQDEGDHLKIGEYWVQMFY------------------- 261
N+ +K+G+ + F+
Sbjct: 146 CSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 205
Query: 262 EQIHPNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSV 321
E+IH N N K DI S G + Y+M LQ+ D M+L S+
Sbjct: 206 ERIHENGYN----------------FKSDIWSLGCLLYEMAA---LQSPFYGDKMNLYSL 246
Query: 322 NFE------PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACLGRS 371
+ P L+QL+ C N DP KRP V + + AC S
Sbjct: 247 CKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 89/220 (40%), Gaps = 52/220 (23%)
Query: 185 ELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLD---------------LP 229
+ HPNI++ G + ++++TE++ G L L RL+ +
Sbjct: 73 QFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL----RLNDGQFTVIQLVGMLRGIA 128
Query: 230 TALRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIAS 281
+ +RY ++ ARN+L + K+ ++ + F E+ +S + SS+
Sbjct: 129 SGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE-----NSSDPTETSSLGG 183
Query: 282 NVLD-------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN-FEPKF 327
+ + D S+G + ++++ +D + +N E +
Sbjct: 184 KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM---SFGERPYWDMSNQDVINAIEQDY 240
Query: 328 QIS---RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
++ CP L QL+ C KD + RP F V+ L+++
Sbjct: 241 RLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a
Resolution
pdb|4A63|D Chain D, Crystal Structure Of The P73-Aspp2 Complex At 2.6a
Resolution
pdb|4A63|F Chain F, Crystal Structure Of The P73-Aspp2 Complex At 2.6a
Resolution
pdb|4A63|H Chain H, Crystal Structure Of The P73-Aspp2 Complex At 2.6a
Resolution
pdb|4A63|J Chain J, Crystal Structure Of The P73-Aspp2 Complex At 2.6a
Resolution
pdb|4A63|L Chain L, Crystal Structure Of The P73-Aspp2 Complex At 2.6a
Resolution
Length = 239
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPI 63
D++ G+FD+ + +++ E P++ + + TALH A GH I
Sbjct: 43 DSSLEGEFDL-----------------VQRIIYEVDDPSLPNDEGITALHNAVCAGHTEI 85
Query: 64 VELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDF 108
V+ L+Q+ N+N D TPL A + +C+ L +G F
Sbjct: 86 VKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF 130
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 75/203 (36%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 67 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI + W +H +S+R
Sbjct: 127 HSKRVIHRDIKPENLLLGSAGELKIANFGW------SVH--APSSRRTTLCGTLDYLPPE 178
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 179 MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA--- 235
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 236 -RDLISRLLKHNPSQRPMLREVL 257
>pdb|1YCS|B Chain B, P53-53bp2 Complex
Length = 239
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 4 DAAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPI 63
D++ G+FD+ + +++ E P++ + + TALH A GH I
Sbjct: 43 DSSLEGEFDL-----------------VQRIIYEVDDPSLPNDEGITALHNAVCAGHTEI 85
Query: 64 VELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDF 108
V+ L+Q+ N+N D TPL A + +C+ L +G F
Sbjct: 86 VKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVF 130
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 104/249 (41%), Gaps = 38/249 (15%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
+ QG G TA T + + ++ K L + +RE ++PNI+ +L S +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 200 LGEEMILITEYLPKGNLKGILSKKVRLD--LPTALRYALD----------IARNLLQDE- 246
+G+E+ ++ EYL G+L ++++ + + R L I RN+ D
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNI 148
Query: 247 ----GDHLKIGEYWVQMFYEQIHPNQENSQRND--------NSSIASNVLDDTKKDICSF 294
+K+ ++ F QI P Q S+R+ + + K DI S
Sbjct: 149 LLGMDGSVKLTDFG---FCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 295 GYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRL----KQLIAQCTNKDPS 349
G + +M+EG+ N N ++L + N P+ Q P +L + + +C D
Sbjct: 204 GIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ---NPEKLSAIFRDFLNRCLEMDVE 260
Query: 350 KRPTFAAVI 358
KR + +I
Sbjct: 261 KRGSAKELI 269
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 38/242 (15%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
+ QG G TA T + + ++ K L + +RE ++PNI+ +L S +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 200 LGEEMILITEYLPKGNLKGILSKKVRLD--LPTALRYAL--------------DI-ARNL 242
+G+E+ ++ EYL G+L ++++ + + R L DI + N+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147
Query: 243 LQDEGDHLKIGEYWVQMFYEQIHPNQENSQRND--------NSSIASNVLDDTKKDICSF 294
L +K+ ++ F QI P Q S+R+ + + K DI S
Sbjct: 148 LLGMDGSVKLTDFG---FCAQITPEQ--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 295 GYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRL----KQLIAQCTNKDPS 349
G + +M+EG+ N N ++L + N P+ Q P +L + + +C + D
Sbjct: 203 GIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ---NPEKLSAIFRDFLNRCLDMDVE 259
Query: 350 KR 351
KR
Sbjct: 260 KR 261
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 107/285 (37%), Gaps = 75/285 (26%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL--------------R 187
+G FG+ A+ G + K K + VKM+ KD+ ++L +
Sbjct: 45 EGAFGQVVMAEAVG--IDKDKPKEAVTVAVKML---KDDATEKDLSDLVSEMEMMKMIGK 99
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI--------- 238
H NI+ LG+ + +I EY KGNL+ L R P + Y+ DI
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEYSYDINRVPEEQMT 155
Query: 239 -----------------------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQE 269
ARN+L E + +KI ++ + I ++
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 270 NSQ-RNDNSSIASNVLDDT----KKDICSFGYIFYQM--LEGK---HLQTNNSFDFMHLK 319
+ R +A L D + D+ SFG + +++ L G + F +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
+P + C N L ++ C + PS+RPTF ++ L+ +
Sbjct: 276 HRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI++ G + + ++++TE + G+L L K ++L + +
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 131 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 189
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
+ + D+ S+G + ++++ E + + +N D + + P
Sbjct: 190 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 245
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP L QL+ C KD + RP F ++ L+++
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|1YYH|A Chain A, Crystal Structure Of The Human Notch 1 Ankyrin Domain
pdb|1YYH|B Chain B, Crystal Structure Of The Human Notch 1 Ankyrin Domain
Length = 253
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G + ++Q+ + T L LAA EG ++LL + AN ++ D R P A+ H
Sbjct: 176 LLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 235
Query: 94 RDICRILEV 102
DI R+L++
Sbjct: 236 HDIVRLLDL 244
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 42 NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILE 101
N D TALHLAA + + LL+ A+ N++D RTPL A + + +IL
Sbjct: 51 NQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILI 110
Query: 102 VNGGKDF---IHD 111
N D +HD
Sbjct: 111 RNRATDLDARMHD 123
>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant
pdb|2HE0|B Chain B, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant
Length = 253
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G + ++Q+ + T L LAA EG ++LL + AN ++ D R P A+ H
Sbjct: 176 LLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 235
Query: 94 RDICRILEV 102
DI R+L++
Sbjct: 236 HDIVRLLDL 244
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 42 NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILE 101
N D TALHLAA+ + + LL+ A+ N++D RTPL A + + +IL
Sbjct: 51 NQTDRTGATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILI 110
Query: 102 VNGGKDF---IHD 111
N D +HD
Sbjct: 111 RNRATDLDARMHD 123
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI++ G + + ++++TE + G+L L K ++L + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 160 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
+ + D+ S+G + ++++ E + + +N D + + P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP L QL+ C KD + RP F ++ L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1)
pdb|3B7B|B Chain B, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1)
pdb|3B95|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 2)
pdb|3B95|B Chain B, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 2)
Length = 237
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQY-KANLNLKDRWQRTPLTDARLYG 92
+++ G + +D + T LHLAA +GH +V+ LL + ++N +D TP+ A Y
Sbjct: 63 LIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYK 122
Query: 93 HRDICRILEVNGGKDFIHD 111
H D+ ++L G I D
Sbjct: 123 HVDLVKLLLSKGSDINIRD 141
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 47 DKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
+KR+ LH AA GH I +L+Q AN++ QRTPL +A H + + L
Sbjct: 10 NKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYL 63
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL 85
+L +G+ N++D ++ LH AA G I E+LL K +L+ + +PL
Sbjct: 130 LLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPL 181
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/213 (19%), Positives = 89/213 (41%), Gaps = 36/213 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI++ G + + ++++TE + G+L L K ++L + +
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 160 MKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTS 218
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHL--KSVNFEPKFQISR 331
+ + D+ S+G + ++++ E + + +N D + + P
Sbjct: 219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMD--- 274
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP L QL+ C KD + RP F ++ L+++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 107/285 (37%), Gaps = 75/285 (26%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL--------------R 187
+G FG+ A+ G + K K + VKM+ KD+ ++L +
Sbjct: 45 EGAFGQVVMAEAVG--IDKDKPKEAVTVAVKML---KDDATEKDLSDLVSEMEMMKMIGK 99
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI--------- 238
H NI+ LG+ + +I EY KGNL+ L R P + Y+ DI
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEYSYDINRVPEEQMT 155
Query: 239 -----------------------------ARNLLQDEGDHLKIGEYWVQMFYEQI-HPNQ 268
ARN+L E + +KI ++ + I + +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 269 ENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQM--LEGK---HLQTNNSFDFMHLK 319
+ R +A L D + D+ SFG + +++ L G + F +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
+P + C N L ++ C + PS+RPTF ++ L+ +
Sbjct: 276 HRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On
Hes-1 Promoter Dna Sequence
pdb|3NBN|B Chain B, Crystal Structure Of A Dimer Of Notch Transcription
Complex Trimers On Hes1 Dna
pdb|3NBN|E Chain E, Crystal Structure Of A Dimer Of Notch Transcription
Complex Trimers On Hes1 Dna
pdb|3V79|K Chain K, Structure Of Human Notch1 Transcription Complex Including
Csl, Ram, Ank, And Maml-1 On Hes-1 Promoter Dna Sequence
Length = 256
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G + ++Q+ + T L LAA EG ++LL + AN ++ D R P A+ H
Sbjct: 177 LLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 236
Query: 94 RDICRILE 101
DI R+L+
Sbjct: 237 HDIVRLLD 244
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 42 NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILE 101
N D TALHLAA + + LL+ A+ N++D RTPL A + + +IL
Sbjct: 52 NQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILI 111
Query: 102 VNGGKDF---IHD 111
N D +HD
Sbjct: 112 RNRATDLDARMHD 124
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 105/249 (42%), Gaps = 38/249 (15%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
+ QG G TA T + + ++ K L + +RE ++PNI+ +L S +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 200 LGEEMILITEYLPKGNLKGILSKKVRLD--LPTALRYAL--------------DI-ARNL 242
+G+E+ ++ EYL G+L ++++ + + R L DI + N+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 148
Query: 243 LQDEGDHLKIGEYWVQMFYEQIHPNQENSQRND--------NSSIASNVLDDTKKDICSF 294
L +K+ ++ F QI P Q S+R+ + + K DI S
Sbjct: 149 LLGMDGSVKLTDFG---FCAQITPEQ--SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 203
Query: 295 GYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRL----KQLIAQCTNKDPS 349
G + +M+EG+ N N ++L + N P+ Q P +L + + +C D
Sbjct: 204 GIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ---NPEKLSAIFRDFLNRCLEMDVE 260
Query: 350 KRPTFAAVI 358
KR + +I
Sbjct: 261 KRGSAKELI 269
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 87/211 (41%), Gaps = 32/211 (15%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPNI+ G + + ++++TEY+ G+L L K ++L +
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAG 136
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
++Y D+ ARN+L + K+ ++ + E P + R I
Sbjct: 137 MKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLED-DPEAAYTTRGGKIPIRWTA 195
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHLKSVNFEPKFQISRCP 333
+ + D+ S+G + ++++ E + + N D + + + CP
Sbjct: 196 PEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQ-DVIKAVEEGYRLPSPMD-CP 253
Query: 334 NRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
L QL+ C K+ + RP F ++ L+++
Sbjct: 254 AALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2QC9|A Chain A, Mouse Notch 1 Ankyrin Repeat Intracellular Domain
pdb|2QC9|B Chain B, Mouse Notch 1 Ankyrin Repeat Intracellular Domain
Length = 210
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G + ++Q+ + T L LAA EG ++LL + AN ++ D R P A+ H
Sbjct: 141 LLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 200
Query: 94 RDICRILE 101
DI R+L+
Sbjct: 201 HDIVRLLD 208
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Query: 42 NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILE 101
N D TALHLAA + + LL+ A+ ++D RTPL A + + +IL
Sbjct: 16 NQTDRTGETALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAAVSADAQGVFQILL 75
Query: 102 VNGGKDF---IHD 111
N D +HD
Sbjct: 76 RNRATDLDARMHD 88
>pdb|1AP7|A Chain A, P19-Ink4d From Mouse, Nmr, 20 Structures
Length = 168
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 33 QMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYG 92
++L++G SPNVQD + +H AA G +++L+++ A++N D P+ A G
Sbjct: 61 ELLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREG 120
Query: 93 HRDICRIL 100
H + L
Sbjct: 121 HSSVVSFL 128
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 31 LNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARL 90
L ++ G N D +HLA EGH+ +V L +++L+ +D TPL AR
Sbjct: 92 LKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVS-FLAPESDLHHRDASGLTPLELARQ 150
Query: 91 YGHRDICRILE 101
G +++ IL+
Sbjct: 151 RGAQNLMDILQ 161
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 107/286 (37%), Gaps = 77/286 (26%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL--------------R 187
+G FG+ A+ G + K K + VKM+ KD+ ++L +
Sbjct: 45 EGAFGQVVMAEAVG--IDKDKPKEAVTVAVKML---KDDATEKDLSDLVSEMEMMKMIGK 99
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI--------- 238
H NI+ LG+ + +I EY KGNL+ L R P + Y+ DI
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEYSYDINRVPEEQMT 155
Query: 239 -----------------------------ARNLLQDEGDHLKIGEYWVQMFYEQI--HPN 267
ARN+L E + +KI ++ + I + N
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 268 QENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQM--LEGK---HLQTNNSFDFMHL 318
N R +A L D + D+ SFG + +++ L G + F +
Sbjct: 216 TTNG-RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKE 274
Query: 319 KSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
+P + C N L ++ C + PS+RPTF ++ L+ +
Sbjct: 275 GHRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 107/285 (37%), Gaps = 75/285 (26%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL--------------R 187
+G FG+ A+ G + K K + VKM+ KD+ ++L +
Sbjct: 37 EGCFGQVVMAEAVG--IDKDKPKEAVTVAVKML---KDDATEKDLSDLVSEMEMMKMIGK 91
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI--------- 238
H NI+ LG+ + +I EY KGNL+ L R P + Y+ DI
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEYSYDINRVPEEQMT 147
Query: 239 -----------------------------ARNLLQDEGDHLKIGEYWVQMFYEQI-HPNQ 268
ARN+L E + +KI ++ + I + +
Sbjct: 148 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 269 ENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQM--LEGK---HLQTNNSFDFMHLK 319
+ R +A L D + D+ SFG + +++ L G + F +
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 267
Query: 320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
+P + C N L ++ C + PS+RPTF ++ L+ +
Sbjct: 268 HRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 102/242 (42%), Gaps = 38/242 (15%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
+ QG G TA T + + ++ K L + +RE ++PNI+ +L S +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 200 LGEEMILITEYLPKGNLKGILSKKVRLD--LPTALRYAL--------------DI-ARNL 242
+G+E+ ++ EYL G+L ++++ + + R L DI + N+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147
Query: 243 LQDEGDHLKIGEYWVQMFYEQIHPNQENSQRND--------NSSIASNVLDDTKKDICSF 294
L +K+ ++ F QI P Q S+R+ + + K DI S
Sbjct: 148 LLGMDGSVKLTDFG---FCAQITPEQ--SKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSL 202
Query: 295 GYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRL----KQLIAQCTNKDPS 349
G + +M+EG+ N N ++L + N P+ Q P +L + + +C D
Sbjct: 203 GIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQ---NPEKLSAIFRDFLNRCLEMDVE 259
Query: 350 KR 351
KR
Sbjct: 260 KR 261
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 107/285 (37%), Gaps = 75/285 (26%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL--------------R 187
+G FG+ A+ G + K K + VKM+ KD+ ++L +
Sbjct: 91 EGCFGQVVMAEAVG--IDKDKPKEAVTVAVKML---KDDATEKDLSDLVSEMEMMKMIGK 145
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI--------- 238
H NI+ LG+ + +I EY KGNL+ L R P + Y+ DI
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEYSYDINRVPEEQMT 201
Query: 239 -----------------------------ARNLLQDEGDHLKIGEYWVQMFYEQI-HPNQ 268
ARN+L E + +KI ++ + I + +
Sbjct: 202 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 269 ENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQM--LEGK---HLQTNNSFDFMHLK 319
+ R +A L D + D+ SFG + +++ L G + F +
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 321
Query: 320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
+P + C N L ++ C + PS+RPTF ++ L+ +
Sbjct: 322 HRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 107/285 (37%), Gaps = 75/285 (26%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL--------------R 187
+G FG+ A+ G + K K + VKM+ KD+ ++L +
Sbjct: 34 EGCFGQVVMAEAVG--IDKDKPKEAVTVAVKML---KDDATEKDLSDLVSEMEMMKMIGK 88
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI--------- 238
H NI+ LG+ + +I EY KGNL+ L R P + Y+ DI
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEYSYDINRVPEEQMT 144
Query: 239 -----------------------------ARNLLQDEGDHLKIGEYWVQMFYEQI-HPNQ 268
ARN+L E + +KI ++ + I + +
Sbjct: 145 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 269 ENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQM--LEGK---HLQTNNSFDFMHLK 319
+ R +A L D + D+ SFG + +++ L G + F +
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 264
Query: 320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
+P + C N L ++ C + PS+RPTF ++ L+ +
Sbjct: 265 HRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 107/285 (37%), Gaps = 75/285 (26%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL--------------R 187
+G FG+ A+ G + K K + VKM+ KD+ ++L +
Sbjct: 45 EGAFGQVVMAEAVG--IDKDKPKEAVTVAVKML---KDDATEKDLSDLVSEMEMMKMIGK 99
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI--------- 238
H NI+ LG+ + +I EY KGNL+ L R P + Y+ DI
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEYSYDINRVPEEQMT 155
Query: 239 -----------------------------ARNLLQDEGDHLKIGEYWVQMFYEQI-HPNQ 268
ARN+L E + +KI ++ + I + +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 269 ENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQM--LEGK---HLQTNNSFDFMHLK 319
+ R +A L D + D+ SFG + +++ L G + F +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
+P + C N L ++ C + PS+RPTF ++ L+ +
Sbjct: 276 HRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1BLX|B Chain B, P19ink4dCDK6 COMPLEX
Length = 166
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%)
Query: 33 QMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYG 92
++L++G SPNVQD + +H AA G +++L+++ A++N D P+ A G
Sbjct: 59 ELLKQGASPNVQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREG 118
Query: 93 HRDICRIL 100
H + L
Sbjct: 119 HSSVVSFL 126
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 31 LNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARL 90
L ++ G N D +HLA EGH+ +V L +++L+ +D TPL AR
Sbjct: 90 LKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVS-FLAPESDLHHRDASGLTPLELARQ 148
Query: 91 YGHRDICRILE 101
G +++ IL+
Sbjct: 149 RGAQNLMDILQ 159
>pdb|2F8Y|A Chain A, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a
Resolution.
pdb|2F8Y|B Chain B, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a
Resolution
Length = 223
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G + ++Q+ + T L LAA EG ++LL + AN ++ D R P A+ H
Sbjct: 144 LLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 203
Query: 94 RDICRILE 101
DI R+L+
Sbjct: 204 HDIVRLLD 211
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 42 NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILE 101
N D TALHLAA + + LL+ A+ N++D RTPL A + + +IL
Sbjct: 19 NQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILI 78
Query: 102 VNGGKDF---IHD 111
N D +HD
Sbjct: 79 RNRATDLDARMHD 91
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 77/207 (37%), Gaps = 50/207 (24%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K + D Y ++A
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRNDNSSIASNVLD- 285
NLL LKI ++ W +H +S+R + LD
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGW------SVH--APSSRR----TTLCGTLDY 177
Query: 286 -----------DTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISR 331
D K D+ S G + Y+ L GK N++ + + V F P F
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEG 237
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ +PS+RP V+
Sbjct: 238 A----RDLISRLLKHNPSQRPXLREVL 260
>pdb|1BI8|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|D Chain D, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
Length = 166
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 33 QMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYG 92
++L++G SPNVQD + +H AA G +++L+++ A++N+ D P+ A G
Sbjct: 59 ELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEG 118
Query: 93 HRDICRIL 100
H + L
Sbjct: 119 HTAVVSFL 126
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 31 LNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARL 90
L ++ G NV D +HLA EGH +V L +++L+ +D TPL A
Sbjct: 90 LKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVS-FLAAESDLHRRDARGLTPLELALQ 148
Query: 91 YGHRDICRILE 101
G +D+ IL+
Sbjct: 149 RGAQDLVDILQ 159
>pdb|1BD8|A Chain A, Structure Of Cdk Inhibitor P19ink4d
Length = 156
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 33 QMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYG 92
++L++G SPNVQD + +H AA G +++L+++ A++N+ D P+ A G
Sbjct: 53 ELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEG 112
Query: 93 HRDICRIL 100
H + L
Sbjct: 113 HTAVVSFL 120
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 31 LNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARL 90
L ++ G NV D +HLA EGH +V L +++L+ +D TPL A
Sbjct: 84 LKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVS-FLAAESDLHRRDARGLTPLELALQ 142
Query: 91 YGHRDICRILE 101
G +D+ IL+
Sbjct: 143 RGAQDLVDILQ 153
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 107/285 (37%), Gaps = 75/285 (26%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL--------------R 187
+G FG+ A+ G + K K + VKM+ KD+ ++L +
Sbjct: 32 EGCFGQVVMAEAVG--IDKDKPKEAVTVAVKML---KDDATEKDLSDLVSEMEMMKMIGK 86
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI--------- 238
H NI+ LG+ + +I EY KGNL+ L R P + Y+ DI
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEYSYDINRVPEEQMT 142
Query: 239 -----------------------------ARNLLQDEGDHLKIGEYWVQMFYEQI-HPNQ 268
ARN+L E + +KI ++ + I + +
Sbjct: 143 FKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 269 ENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQM--LEGK---HLQTNNSFDFMHLK 319
+ R +A L D + D+ SFG + +++ L G + F +
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 262
Query: 320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
+P + C N L ++ C + PS+RPTF ++ L+ +
Sbjct: 263 HRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 46/221 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVR--------LD---LPTA 231
+ + HPNI+ + S V+ +E+ L+ + L G++ I+ V LD + T
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 232 LRYALD---------------IARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDN 276
LR L+ A N+L E ++I ++ V F N R
Sbjct: 122 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 277 SS----IASNVLD-----DTKKDICSFGYIFYQMLEG----------KHLQTNNSFDFMH 317
+A V++ D K DI SFG ++ G K L D
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 241
Query: 318 LKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
L++ + K + + +++I+ C KDP KRPT A ++
Sbjct: 242 LET-GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 104/282 (36%), Gaps = 69/282 (24%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL-----------RHPN 190
+G FG+ A+ G + K K + VKM+ L +L +H N
Sbjct: 45 EGAFGQVVMAEAVG--IDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 191 ILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------ 238
I+ LG+ + +I EY KGNL+ L R P + Y+ DI
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 239 --------------------------ARNLLQDEGDHLKIGEYWVQMFYEQI-HPNQENS 271
ARN+L E + +KI ++ + I + + +
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 272 QRNDNSSIASNVLDDT----KKDICSFGYIFYQM--LEGK---HLQTNNSFDFMHLKSVN 322
R +A L D + D+ SFG + +++ L G + F +
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM 278
Query: 323 FEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
+P + C N L ++ C + PS+RPTF ++ L+ +
Sbjct: 279 DKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 96/243 (39%), Gaps = 39/243 (16%)
Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIVL 200
G FGE W G + T + P M + A ++ ++ L+H +++ +
Sbjct: 23 GQFGEV----WMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 201 GEEMILITEYLPKGNLKGILS--KKVRLDLPTALRYALDIAR------------------ 240
E + +ITE++ KG+L L + ++ LP + ++ IA
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAA 138
Query: 241 NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGY 296
N+L E KI ++ + E + A ++ K ++ SFG
Sbjct: 139 NVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGI 198
Query: 297 IFYQMLEGKHL----QTNNSFDFMHLKSVNFE-PKFQISRCPNRLKQLIAQCTNKDPSKR 351
+ Y+++ + +TN D M S + P+ + CP+ L ++ C + +R
Sbjct: 199 LLYEIVTYGKIPYPGRTNA--DVMSALSQGYRMPRME--NCPDELYDIMKMCWKEKAEER 254
Query: 352 PTF 354
PTF
Sbjct: 255 PTF 257
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 107/285 (37%), Gaps = 75/285 (26%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL--------------R 187
+G FG+ A+ G + K K + VKM+ KD+ ++L +
Sbjct: 45 EGAFGQVVMAEAVG--IDKDKPKEAVTVAVKML---KDDATEKDLSDLVSEMEMMKMIGK 99
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI--------- 238
H NI+ LG+ + +I EY KGNL+ L R P + Y+ DI
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEYSYDINRVPEEQMT 155
Query: 239 -----------------------------ARNLLQDEGDHLKIGEYWVQMFYEQI-HPNQ 268
ARN+L E + ++I ++ + I + +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 269 ENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQM--LEGK---HLQTNNSFDFMHLK 319
+ R +A L D + D+ SFG + +++ L G + F +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
+P + C N L ++ C + PS+RPTF ++ L+ +
Sbjct: 276 HRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 88/220 (40%), Gaps = 52/220 (23%)
Query: 185 ELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLD---------------LP 229
+ HPNI++ G + ++++TE++ G L L RL+ +
Sbjct: 71 QFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL----RLNDGQFTVIQLVGMLRGIA 126
Query: 230 TALRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIAS 281
+ +RY ++ ARN+L + K+ ++ + F E+ +S SS+
Sbjct: 127 SGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE-----NSSDPTYTSSLGG 181
Query: 282 NVLD-------------DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVN-FEPKF 327
+ + D S+G + ++++ +D + +N E +
Sbjct: 182 KIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM---SFGERPYWDMSNQDVINAIEQDY 238
Query: 328 QIS---RCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
++ CP L QL+ C KD + RP F V+ L+++
Sbjct: 239 RLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 46/221 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVR--------LD---LPTA 231
+ + HPNI+ + S V+ +E+ L+ + L G++ I+ V LD + T
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 232 LRYALD---------------IARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDN 276
LR L+ A N+L E ++I ++ V F N R
Sbjct: 127 LREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 277 SS----IASNVLD-----DTKKDICSFGYIFYQMLEG----------KHLQTNNSFDFMH 317
+A V++ D K DI SFG ++ G K L D
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 246
Query: 318 LKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
L++ + K + + +++I+ C KDP KRPT A ++
Sbjct: 247 LET-GVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 82/208 (39%), Gaps = 26/208 (12%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI--- 238
+ +L HP ++Q G + + L+TE++ G L L +++ T L LD+
Sbjct: 57 MMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 116
Query: 239 ---------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
ARN L E +K+ ++ + F + + V
Sbjct: 117 MAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 176
Query: 284 LD----DTKKDICSFGYIFYQML-EGKHLQTNNS-FDFMHLKSVNFEPKFQISRCPNRLK 337
+K D+ SFG + +++ EGK N S + + S F ++ +
Sbjct: 177 FSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR-LYKPRLASTHVY 235
Query: 338 QLIAQCTNKDPSKRPTFAAVIITLEEVS 365
Q++ C + P RP F+ ++ L E++
Sbjct: 236 QIMNHCWRERPEDRPAFSRLLRQLAEIA 263
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 89/213 (41%), Gaps = 37/213 (17%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALD---- 237
L++ HPNI++ +G + + ++ E + G+ L ++ RL + T L+ D
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAG 225
Query: 238 --------------IARNLLQDEGDHLKIGEYWVQMFYEQ---IHPNQENSQRNDNSSIA 280
ARN L E + LKI ++ M E+ ++ ++ A
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDF--GMSREEADGVYAASGGLRQVPVKWTA 283
Query: 281 SNVLD----DTKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNFEPKFQISR 331
L+ ++ D+ SFG + ++ +L + +F+ P+
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPEL---- 339
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + +L+ QC +P +RP+F+ + L+ +
Sbjct: 340 CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 106/285 (37%), Gaps = 75/285 (26%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL--------------R 187
+G FG+ A+ G + K K + VKM+ KD+ ++L +
Sbjct: 45 EGAFGQVVMAEAVG--IDKDKPKEAVTVAVKML---KDDATEKDLSDLVSEMEMMKMIGK 99
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI--------- 238
H NI+ LG+ + +I Y KGNL+ L R P + Y+ DI
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYL----RARRPPGMEYSYDINRVPEEQMT 155
Query: 239 -----------------------------ARNLLQDEGDHLKIGEYWVQMFYEQI-HPNQ 268
ARN+L E + +KI ++ + I + +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 269 ENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQM--LEGK---HLQTNNSFDFMHLK 319
+ R +A L D + D+ SFG + +++ L G + F +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
+P + C N L ++ C + PS+RPTF ++ L+ +
Sbjct: 276 HRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 84/233 (36%), Gaps = 66/233 (28%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALD--------- 237
+H NI+ LG+ + +I EY KGNL+ L + P L Y+ +
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR----RPPGLEYSYNPSHNPEEQL 139
Query: 238 -----------------------------IARNLLQDEGDHLKIGEYWVQMFYEQI-HPN 267
ARN+L E + +KI ++ + I +
Sbjct: 140 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 199
Query: 268 QENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNF 323
+ + R +A L D + D+ SFG + +++ + V
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF---------TLGGSPYPGVPV 250
Query: 324 EPKFQI----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA 366
E F++ S C N L ++ C + PS+RPTF ++ L+ + A
Sbjct: 251 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 303
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 84/233 (36%), Gaps = 66/233 (28%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALD--------- 237
+H NI+ LG+ + +I EY KGNL+ L + P L Y+ +
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR----RPPGLEYSYNPSHNPEEQL 136
Query: 238 -----------------------------IARNLLQDEGDHLKIGEYWVQMFYEQI-HPN 267
ARN+L E + +KI ++ + I +
Sbjct: 137 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 196
Query: 268 QENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNF 323
+ + R +A L D + D+ SFG + +++ + V
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF---------TLGGSPYPGVPV 247
Query: 324 EPKFQI----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA 366
E F++ S C N L ++ C + PS+RPTF ++ L+ + A
Sbjct: 248 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 300
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 84/233 (36%), Gaps = 66/233 (28%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALD--------- 237
+H NI+ LG+ + +I EY KGNL+ L + P L Y+ +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR----RPPGLEYSYNPSHNPEEQL 147
Query: 238 -----------------------------IARNLLQDEGDHLKIGEYWVQMFYEQI-HPN 267
ARN+L E + +KI ++ + I +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 268 QENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNF 323
+ + R +A L D + D+ SFG + +++ + V
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF---------TLGGSPYPGVPV 258
Query: 324 EPKFQI----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA 366
E F++ S C N L ++ C + PS+RPTF ++ L+ + A
Sbjct: 259 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 84/233 (36%), Gaps = 66/233 (28%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALD--------- 237
+H NI+ LG+ + +I EY KGNL+ L + P L Y+ +
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR----RPPGLEYSYNPSHNPEEQL 140
Query: 238 -----------------------------IARNLLQDEGDHLKIGEYWVQMFYEQI-HPN 267
ARN+L E + +KI ++ + I +
Sbjct: 141 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 200
Query: 268 QENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNF 323
+ + R +A L D + D+ SFG + +++ + V
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF---------TLGGSPYPGVPV 251
Query: 324 EPKFQI----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA 366
E F++ S C N L ++ C + PS+RPTF ++ L+ + A
Sbjct: 252 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 304
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 84/233 (36%), Gaps = 66/233 (28%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALD--------- 237
+H NI+ LG+ + +I EY KGNL+ L + P L Y+ +
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR----RPPGLEYSYNPSHNPEEQL 188
Query: 238 -----------------------------IARNLLQDEGDHLKIGEYWVQMFYEQI-HPN 267
ARN+L E + +KI ++ + I +
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248
Query: 268 QENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNF 323
+ + R +A L D + D+ SFG + +++ + V
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF---------TLGGSPYPGVPV 299
Query: 324 EPKFQI----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA 366
E F++ S C N L ++ C + PS+RPTF ++ L+ + A
Sbjct: 300 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 84/233 (36%), Gaps = 66/233 (28%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALD--------- 237
+H NI+ LG+ + +I EY KGNL+ L + P L Y+ +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARE----PPGLEYSYNPSHNPEEQL 147
Query: 238 -----------------------------IARNLLQDEGDHLKIGEYWVQMFYEQI-HPN 267
ARN+L E + +KI ++ + I +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 268 QENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNF 323
+ + R +A L D + D+ SFG + +++ + V
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF---------TLGGSPYPGVPV 258
Query: 324 EPKFQI----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA 366
E F++ S C N L ++ C + PS+RPTF ++ L+ + A
Sbjct: 259 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/208 (18%), Positives = 86/208 (41%), Gaps = 36/208 (17%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 143
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS---- 278
++Y ARN + DE +K+ ++ + ++ + S N +
Sbjct: 144 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEXXSVHNKTGAKLPV 200
Query: 279 --IASNVLDD----TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQIS 330
+A L TK D+ SFG + ++++ N+FD + + + Q
Sbjct: 201 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPE 259
Query: 331 RCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
CP+ L +++ +C + RP+F+ ++
Sbjct: 260 YCPDPLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 43/216 (19%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDL------PTALRYALDI-- 238
+H NI+ LG+ G +++ITEY G+L L +K DL P LR L
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 239 --------------------ARNLLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRNDN 276
ARN+L G KIG++ + + + + + N++
Sbjct: 160 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 277 SSIASNVLD---DTKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNF-EPKF 327
++ D + D+ S+G + +++ + N+ F + +P F
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 279
Query: 328 QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
P + ++ C +P+ RPTF + L+E
Sbjct: 280 ----APKNIYSIMQACWALEPTHRPTFQQICSFLQE 311
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 103 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 162
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWV--QMF---YEQIHPNQENSQRNDNS 277
++Y ARN + DE +K+ ++ + M+ Y +H + +
Sbjct: 163 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH--NKTGAKLPVK 220
Query: 278 SIASNVLDD----TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQISR 331
+A L TK D+ SFG + ++++ N+FD + + + Q
Sbjct: 221 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPEY 279
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVI 358
CP+ L +++ +C + RP+F+ ++
Sbjct: 280 CPDPLYEVMLKCWHPKAEMRPSFSELV 306
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 74/204 (36%), Gaps = 44/204 (21%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K R D Y ++A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRNDN---------S 277
NLL LKI ++ W +H S R D
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGW------SVHA---PSSRRDTLCGTLDYLPP 179
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPN 334
+ + D K D+ S G + Y+ L G +++ + + V F P F
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGA-- 237
Query: 335 RLKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ + S+R T A V+
Sbjct: 238 --RDLISRLLKHNASQRLTLAEVL 259
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 77 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 136
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWV--QMF---YEQIHPNQENSQRNDNS 277
++Y ARN + DE +K+ ++ + M+ Y +H + +
Sbjct: 137 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH--NKTGAKLPVK 194
Query: 278 SIASNVLDD----TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQISR 331
+A L TK D+ SFG + ++++ N+FD + + + Q
Sbjct: 195 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPEY 253
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVI 358
CP+ L +++ +C + RP+F+ ++
Sbjct: 254 CPDPLYEVMLKCWHPKAEMRPSFSELV 280
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 104 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 163
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWV--QMF---YEQIHPNQENSQRNDNS 277
++Y ARN + DE +K+ ++ + M+ Y +H + +
Sbjct: 164 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH--NKTGAKLPVK 221
Query: 278 SIASNVLDD----TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQISR 331
+A L TK D+ SFG + ++++ N+FD + + + Q
Sbjct: 222 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPEY 280
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVI 358
CP+ L +++ +C + RP+F+ ++
Sbjct: 281 CPDPLYEVMLKCWHPKAEMRPSFSELV 307
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 88/213 (41%), Gaps = 37/213 (17%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDIA-- 239
L++ HPNI++ +G + + ++ E + G+ L ++ RL + T L+ D A
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAG 225
Query: 240 ----------------RNLLQDEGDHLKIGEYWVQMFYEQ---IHPNQENSQRNDNSSIA 280
RN L E + LKI ++ M E+ + ++ A
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDF--GMSREEADGVXAASGGLRQVPVKWTA 283
Query: 281 SNVLD----DTKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNFEPKFQISR 331
L+ ++ D+ SFG + ++ +L + +F+ P+
Sbjct: 284 PEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPEL---- 339
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
CP+ + +L+ QC +P +RP+F+ + L+ +
Sbjct: 340 CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 30/208 (14%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR 240
+++L+H +++ L ++V E + +ITEY+ G+L L ++L + L A IA
Sbjct: 62 MKQLQHQRLVR-LYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 241 ------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASN 282
N+L + KI ++ + E + A
Sbjct: 121 GMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPE 180
Query: 283 VLD----DTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNR 335
++ K D+ SFG + +++ + + ++ N E +++ R CP
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ--NLERGYRMVRPDNCPEE 238
Query: 336 LKQLIAQCTNKDPSKRPTFAAVIITLEE 363
L QL+ C + P RPTF + LE+
Sbjct: 239 LYQLMRLCWKERPEDRPTFDYLRSVLED 266
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 43/216 (19%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDL------PTALRYALDI-- 238
+H NI+ LG+ G +++ITEY G+L L +K DL P LR L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 239 --------------------ARNLLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRNDN 276
ARN+L G KIG++ + + + + + N++
Sbjct: 168 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 277 SSIASNVLD---DTKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNF-EPKF 327
++ D + D+ S+G + +++ + N+ F + +P F
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAF 287
Query: 328 QISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
P + ++ C +P+ RPTF + L+E
Sbjct: 288 ----APKNIYSIMQACWALEPTHRPTFQQICSFLQE 319
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 82 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 141
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWV--QMF---YEQIHPNQENSQRNDNS 277
++Y ARN + DE +K+ ++ + M+ Y +H + +
Sbjct: 142 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH--NKTGAKLPVK 199
Query: 278 SIASNVLDD----TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQISR 331
+A L TK D+ SFG + ++++ N+FD + + + Q
Sbjct: 200 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPEY 258
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVI 358
CP+ L +++ +C + RP+F+ ++
Sbjct: 259 CPDPLYEVMLKCWHPKAEMRPSFSELV 285
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 80 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 139
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWV--QMF---YEQIHPNQENSQRNDNS 277
++Y ARN + DE +K+ ++ + M+ Y +H + +
Sbjct: 140 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH--NKTGAKLPVK 197
Query: 278 SIASNVLDD----TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQISR 331
+A L TK D+ SFG + ++++ N+FD + + + Q
Sbjct: 198 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPEY 256
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVI 358
CP+ L +++ +C + RP+F+ ++
Sbjct: 257 CPDPLYEVMLKCWHPKAEMRPSFSELV 283
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 143
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWV--QMF---YEQIHPNQENSQRNDNS 277
++Y ARN + DE +K+ ++ + M+ Y +H + +
Sbjct: 144 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH--NKTGAKLPVK 201
Query: 278 SIASNVLDD----TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQISR 331
+A L TK D+ SFG + ++++ N+FD + + + Q
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPEY 260
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVI 358
CP+ L +++ +C + RP+F+ ++
Sbjct: 261 CPDPLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWV--QMF---YEQIHPNQENSQRNDNS 277
++Y ARN + DE +K+ ++ + M+ Y +H + +
Sbjct: 145 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH--NKTGAKLPVK 202
Query: 278 SIASNVLDD----TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQISR 331
+A L TK D+ SFG + ++++ N+FD + + + Q
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPEY 261
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVI 358
CP+ L +++ +C + RP+F+ ++
Sbjct: 262 CPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWV--QMF---YEQIHPNQENSQRNDNS 277
++Y ARN + DE +K+ ++ + M+ Y +H + +
Sbjct: 145 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH--NKTGAKLPVK 202
Query: 278 SIASNVLDD----TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQISR 331
+A L TK D+ SFG + ++++ N+FD + + + Q
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPEY 261
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVI 358
CP+ L +++ +C + RP+F+ ++
Sbjct: 262 CPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 79/192 (41%), Gaps = 38/192 (19%)
Query: 191 ILQFLGSIVLGEEMILITEYLPKGN------------------LKGILSKKVRLDLPTAL 232
+ ++ GS + G ++ +I EYL G+ LK IL L +
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKI 142
Query: 233 RYALDIARNLLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRNDNSSIASNVLD----D 286
+ A LL ++GD +K+ ++ V Q+ QI + N+ +A V+ D
Sbjct: 143 HRDIKAANVLLSEQGD-VKLADFGVAGQLTDTQI---KRNTFVGTPFWMAPEVIQQSAYD 198
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNF-----EPKFQISRCPNRLKQLIA 341
+K DI S G ++ +G+ ++ MH V F P + K+ I
Sbjct: 199 SKADIWSLGITAIELAKGEPPNSD-----MHPMRVLFLIPKNNPPTLVGDFTKSFKEFID 253
Query: 342 QCTNKDPSKRPT 353
C NKDPS RPT
Sbjct: 254 ACLNKDPSFRPT 265
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 142
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWV--QMF---YEQIHPNQENSQRNDNS 277
++Y ARN + DE +K+ ++ + M+ Y +H + +
Sbjct: 143 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH--NKTGAKLPVK 200
Query: 278 SIASNVLDD----TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQISR 331
+A L TK D+ SFG + ++++ N+FD + + + Q
Sbjct: 201 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPEY 259
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVI 358
CP+ L +++ +C + RP+F+ ++
Sbjct: 260 CPDPLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 106/285 (37%), Gaps = 75/285 (26%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL--------------R 187
+G FG+ A+ G + K K + VKM+ KD+ ++L +
Sbjct: 45 EGAFGQVVMAEAVG--IDKDKPKEAVTVAVKML---KDDATEKDLSDLVSEMEMMKMIGK 99
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI--------- 238
H NI+ LG+ + +I EY KGNL+ L R P + + DI
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYL----RARRPPGMEXSYDINRVPEEQMT 155
Query: 239 -----------------------------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQE 269
ARN+L E + +KI ++ + I ++
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 270 NSQ-RNDNSSIASNVLDDT----KKDICSFGYIFYQM--LEGK---HLQTNNSFDFMHLK 319
+ R +A L D + D+ SFG + +++ L G + F +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
+P + C N L ++ C + PS+RPTF ++ L+ +
Sbjct: 276 HRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 90/223 (40%), Gaps = 49/223 (21%)
Query: 181 CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTA--------- 231
CKL HPNI+ LG+ + L EY P GNL L K L+ A
Sbjct: 70 CKLGH--HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 127
Query: 232 -------LRYALDI------------------ARNLLQDEGDHLKIGEYWV----QMFYE 262
L +A D+ ARN+L E KI ++ + +++ +
Sbjct: 128 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK 187
Query: 263 QIH---PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDFMHL 318
+ P + + + N S+ + T D+ S+G + ++++ G + ++
Sbjct: 188 KTMGRLPVRWMAIESLNYSVYT-----TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 242
Query: 319 KSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL 361
K + C + + L+ QC + P +RP+FA ++++L
Sbjct: 243 KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 285
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 84/233 (36%), Gaps = 66/233 (28%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALD--------- 237
+H NI+ LG+ + +I EY KGNL+ L + P L ++ +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR----RPPGLEFSFNPSHNPEEQL 147
Query: 238 -----------------------------IARNLLQDEGDHLKIGEYWVQMFYEQIHPNQ 268
ARN+L E + +KI ++ + I +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK 207
Query: 269 ENSQ-RNDNSSIASNVLDDT----KKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNF 323
+ + R +A L D + D+ SFG + +++ + V
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF---------TLGGSPYPGVPV 258
Query: 324 EPKFQI----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA 366
E F++ S C N L ++ C + PS+RPTF ++ L+ + A
Sbjct: 259 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 90/223 (40%), Gaps = 49/223 (21%)
Query: 181 CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTA--------- 231
CKL HPNI+ LG+ + L EY P GNL L K L+ A
Sbjct: 80 CKLGH--HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 137
Query: 232 -------LRYALDI------------------ARNLLQDEGDHLKIGEYWV----QMFYE 262
L +A D+ ARN+L E KI ++ + +++ +
Sbjct: 138 TLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK 197
Query: 263 QIH---PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDFMHL 318
+ P + + + N S+ + T D+ S+G + ++++ G + ++
Sbjct: 198 KTMGRLPVRWMAIESLNYSVYT-----TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 252
Query: 319 KSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL 361
K + C + + L+ QC + P +RP+FA ++++L
Sbjct: 253 KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 295
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 90/223 (40%), Gaps = 49/223 (21%)
Query: 181 CKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTA--------- 231
CKL HPNI+ LG+ + L EY P GNL L K L+ A
Sbjct: 77 CKLGH--HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAS 134
Query: 232 -------LRYALDI------------------ARNLLQDEGDHLKIGEYWV----QMFYE 262
L +A D+ ARN+L E KI ++ + +++ +
Sbjct: 135 TLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVK 194
Query: 263 QIH---PNQENSQRNDNSSIASNVLDDTKKDICSFGYIFYQMLE-GKHLQTNNSFDFMHL 318
+ P + + + N S+ + T D+ S+G + ++++ G + ++
Sbjct: 195 KTMGRLPVRWMAIESLNYSVYT-----TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 249
Query: 319 KSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITL 361
K + C + + L+ QC + P +RP+FA ++++L
Sbjct: 250 KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 292
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/211 (18%), Positives = 86/211 (40%), Gaps = 32/211 (15%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK------VRL-----DLPTA 231
+ + HPN++ G + G+ ++++ E++ G L L K ++L +
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAG 157
Query: 232 LRYALDI--------ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNV 283
+RY D+ ARN+L + K+ ++ + E P + +
Sbjct: 158 MRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIED-DPEAVYTTTGGKIPVRWTA 216
Query: 284 LD-------DTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHLKSVNFEPKFQISRCP 333
+ + D+ S+G + ++++ E + +N D + + + CP
Sbjct: 217 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYRLPAPMD-CP 274
Query: 334 NRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
L QL+ C K+ ++RP F ++ L+++
Sbjct: 275 AGLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 106/285 (37%), Gaps = 75/285 (26%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLREL--------------R 187
+G FG+ A+ G + K K + VKM+ KD+ ++L +
Sbjct: 45 EGAFGQVVMAEAVG--IDKDKPKEAVTVAVKML---KDDATEKDLSDLVSEMEMMKMIGK 99
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI--------- 238
H NI+ LG+ + +I Y KGNL+ L R P + Y+ DI
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYL----RARRPPGMEYSYDINRVPEEQMT 155
Query: 239 -----------------------------ARNLLQDEGDHLKIGEYWVQMFYEQI-HPNQ 268
ARN+L E + +KI ++ + I + +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 269 ENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQM--LEGK---HLQTNNSFDFMHLK 319
+ R +A L D + D+ SFG + +++ L G + F +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 320 SVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
+P + C N L ++ C + PS+RPTF ++ L+ +
Sbjct: 276 HRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 83/233 (35%), Gaps = 66/233 (28%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALD--------- 237
+H NI+ LG+ + +I EY KGNL+ L + P L Y +
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR----RPPGLEYCYNPSHNPEEQL 132
Query: 238 -----------------------------IARNLLQDEGDHLKIGEYWVQMFYEQI-HPN 267
ARN+L E + +KI ++ + I +
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192
Query: 268 QENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNF 323
+ + R +A L D + D+ SFG + +++ + V
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF---------TLGGSPYPGVPV 243
Query: 324 EPKFQI----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA 366
E F++ S C N L ++ C + PS+RPTF ++ L+ + A
Sbjct: 244 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 34/249 (13%)
Query: 143 GVFGESQTAKWRG-TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
G FGE + G T V +K P + A +++L+H +++ L ++V
Sbjct: 24 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN---LMKQLQHQRLVR-LYAVVTQ 79
Query: 202 EEMILITEYLPKGNLKGILS--KKVRLDLPTALRYALDIAR------------------N 241
E + +ITEY+ G+L L ++L + L A IA N
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGYI 297
+L + KI ++ + E + A ++ K D+ SFG +
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTF 354
+++ + + ++ N E +++ R CP L QL+ C + P RPTF
Sbjct: 200 LTEIVTHGRIPYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 257
Query: 355 AAVIITLEE 363
+ LE+
Sbjct: 258 DYLRSVLED 266
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 83/233 (35%), Gaps = 66/233 (28%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALD--------- 237
+H NI+ LG+ + +I EY KGNL+ L + P L Y +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR----RPPGLEYCYNPSHNPEEQL 147
Query: 238 -----------------------------IARNLLQDEGDHLKIGEYWVQMFYEQI-HPN 267
ARN+L E + +KI ++ + I +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 268 QENSQRNDNSSIASNVLDDT----KKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNF 323
+ + R +A L D + D+ SFG + +++ + V
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF---------TLGGSPYPGVPV 258
Query: 324 EPKFQI----------SRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSA 366
E F++ S C N L ++ C + PS+RPTF ++ L+ + A
Sbjct: 259 EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A
Unique Member Of The Ikappab Protein Family
pdb|1K1A|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A
Unique Member Of The Ikappab Protein Family
Length = 241
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G + N Q Y +ALH A+ G P+V L++ A+ +LK+ TPL AR
Sbjct: 169 LLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRV 228
Query: 94 RDICR 98
DI R
Sbjct: 229 IDILR 233
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 34/249 (13%)
Query: 143 GVFGESQTAKWRG-TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
G FGE + G T V +K P + A +++L+H +++ L ++V
Sbjct: 19 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN---LMKQLQHQRLVR-LYAVVTQ 74
Query: 202 EEMILITEYLPKGNLKGILS--KKVRLDLPTALRYALDIAR------------------N 241
E + +ITEY+ G+L L ++L + L A IA N
Sbjct: 75 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 134
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGYI 297
+L + KI ++ + E + A ++ K D+ SFG +
Sbjct: 135 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 194
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTF 354
+++ + + ++ N E +++ R CP L QL+ C + P RPTF
Sbjct: 195 LTEIVTHGRIPYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 252
Query: 355 AAVIITLEE 363
+ LE+
Sbjct: 253 DYLRSVLED 261
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 34/249 (13%)
Query: 143 GVFGESQTAKWRG-TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
G FGE + G T V +K P + A +++L+H +++ L ++V
Sbjct: 26 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN---LMKQLQHQRLVR-LYAVVTQ 81
Query: 202 EEMILITEYLPKGNLKGILS--KKVRLDLPTALRYALDIAR------------------N 241
E + +ITEY+ G+L L ++L + L A IA N
Sbjct: 82 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 141
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGYI 297
+L + KI ++ + E + A ++ K D+ SFG +
Sbjct: 142 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 201
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTF 354
+++ + + ++ N E +++ R CP L QL+ C + P RPTF
Sbjct: 202 LTEIVTHGRIPYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 259
Query: 355 AAVIITLEE 363
+ LE+
Sbjct: 260 DYLRSVLED 268
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 34/249 (13%)
Query: 143 GVFGESQTAKWRG-TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
G FGE + G T V +K P + A +++L+H +++ L ++V
Sbjct: 25 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN---LMKQLQHQRLVR-LYAVVTQ 80
Query: 202 EEMILITEYLPKGNLKGILS--KKVRLDLPTALRYALDIAR------------------N 241
E + +ITEY+ G+L L ++L + L A IA N
Sbjct: 81 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 140
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGYI 297
+L + KI ++ + E + A ++ K D+ SFG +
Sbjct: 141 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 200
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTF 354
+++ + + ++ N E +++ R CP L QL+ C + P RPTF
Sbjct: 201 LTEIVTHGRIPYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 258
Query: 355 AAVIITLEE 363
+ LE+
Sbjct: 259 DYLRSVLED 267
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 34/249 (13%)
Query: 143 GVFGESQTAKWRG-TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
G FGE + G T V +K P + A +++L+H +++ L ++V
Sbjct: 20 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN---LMKQLQHQRLVR-LYAVVTQ 75
Query: 202 EEMILITEYLPKGNLKGILS--KKVRLDLPTALRYALDIAR------------------N 241
E + +ITEY+ G+L L ++L + L A IA N
Sbjct: 76 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAAN 135
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGYI 297
+L + KI ++ + E + A ++ K D+ SFG +
Sbjct: 136 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 195
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTF 354
+++ + + ++ N E +++ R CP L QL+ C + P RPTF
Sbjct: 196 LTEIVTHGRIPYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 253
Query: 355 AAVIITLEE 363
+ LE+
Sbjct: 254 DYLRSVLED 262
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 34/249 (13%)
Query: 143 GVFGESQTAKWRG-TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
G FGE + G T V +K P + A +++L+H +++ L ++V
Sbjct: 24 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN---LMKQLQHQRLVR-LYAVVTQ 79
Query: 202 EEMILITEYLPKGNLKGILS--KKVRLDLPTALRYALDIAR------------------N 241
E + +ITEY+ G+L L ++L + L A IA N
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGYI 297
+L + KI ++ + E + A ++ K D+ SFG +
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTF 354
+++ + + ++ N E +++ R CP L QL+ C + P RPTF
Sbjct: 200 LTEIVTHGRIPYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 257
Query: 355 AAVIITLEE 363
+ LE+
Sbjct: 258 DYLRSVLED 266
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 34/249 (13%)
Query: 143 GVFGESQTAKWRG-TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
G FGE + G T V +K P + A +++L+H +++ L ++V
Sbjct: 33 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN---LMKQLQHQRLVR-LYAVVTQ 88
Query: 202 EEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------N 241
E + +ITEY+ G+L L ++L + L A IA N
Sbjct: 89 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 148
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGYI 297
+L + KI ++ + E + A ++ K D+ SFG +
Sbjct: 149 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 208
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTF 354
+++ + + ++ N E +++ R CP L QL+ C + P RPTF
Sbjct: 209 LTEIVTHGRIPYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 266
Query: 355 AAVIITLEE 363
+ LE+
Sbjct: 267 DYLRSVLED 275
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 97/251 (38%), Gaps = 38/251 (15%)
Query: 143 GVFGESQTAKWRG-TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
G FGE + G T V +K P + A +++L+H +++ L ++V
Sbjct: 32 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN---LMKQLQHQRLVR-LYAVVTQ 87
Query: 202 EEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------N 241
E + +ITEY+ G+L L ++L + L A IA N
Sbjct: 88 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 147
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGYI 297
+L + KI ++ + E + A ++ K D+ SFG +
Sbjct: 148 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 207
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSV--NFEPKFQISR---CPNRLKQLIAQCTNKDPSKRP 352
+++ + + M V N E +++ R CP L QL+ C + P RP
Sbjct: 208 LTEIVTHGRI----PYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRP 263
Query: 353 TFAAVIITLEE 363
TF + LE+
Sbjct: 264 TFDYLRSVLED 274
>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs
Box-containing Protein 9 (asb9) In Complex With Elonginb
And Elonginc
pdb|3ZKJ|D Chain D, Crystal Structure Of Ankyrin Repeat And Socs
Box-containing Protein 9 (asb9) In Complex With Elonginb
And Elonginc
Length = 261
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A G ++ L ++ +G + N+ D + LH A GH V++LL++ A +N
Sbjct: 11 AIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWH 70
Query: 83 TPLTDARLYGHRDICRILEVNGG 105
TPL +A + G D +L +G
Sbjct: 71 TPLFNACVSGSWDCVNLLLQHGA 93
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 31 LNQMLREGTSPNVQ-DYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDAR 89
+N +L+ G S VQ + D + +H AA GH V L+ Y N++ K TPL A
Sbjct: 85 VNLLLQHGAS--VQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLAC 142
Query: 90 LYGHRDICRIL-----EVNGGKDFIHDQPLTVRNEKDSNEV 125
R + L +VN GK D PL S E+
Sbjct: 143 ENQQRACVKKLLESGADVNQGKG--QDSPLHAVARTASEEL 181
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 87/208 (41%), Gaps = 36/208 (17%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS---- 278
+++ ARN + DE +K+ ++ + ++ + +S N +
Sbjct: 145 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNKTGAKLPV 201
Query: 279 --IASNVLDD----TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQIS 330
+A L TK D+ SFG + ++++ N+FD + + + Q
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPE 260
Query: 331 RCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
CP+ L +++ +C + RP+F+ ++
Sbjct: 261 YCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 87/208 (41%), Gaps = 36/208 (17%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 203
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS---- 278
+++ ARN + DE +K+ ++ + ++ + +S N +
Sbjct: 204 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNKTGAKLPV 260
Query: 279 --IASNVLDD----TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQIS 330
+A L TK D+ SFG + ++++ N+FD + + + Q
Sbjct: 261 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPE 319
Query: 331 RCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
CP+ L +++ +C + RP+F+ ++
Sbjct: 320 YCPDPLYEVMLKCWHPKAEMRPSFSELV 347
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 101/251 (40%), Gaps = 40/251 (15%)
Query: 143 GVFGESQTAKWRGTW-VVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
G FG + KW+G + V +IK + A+ KL HP +++F G
Sbjct: 19 GQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLS---HPKLVKFYGVCSKE 75
Query: 202 EEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDI------------------ARNL 242
+ ++TEY+ G L L S L+ L D+ ARN
Sbjct: 76 YPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNC 135
Query: 243 LQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD-------DTKKDICSFG 295
L D +K+ ++ + + + +Q S + + + +K D+ +FG
Sbjct: 136 LVDRDLCVKVSDFGMTRY---VLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFG 192
Query: 296 YIFYQMLE-GK---HLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR 351
+ +++ GK L TN+ + LK ++ + + Q++ C ++ P KR
Sbjct: 193 ILMWEVFSLGKMPYDLYTNSE---VVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKR 249
Query: 352 PTFAAVIITLE 362
PTF ++ ++E
Sbjct: 250 PTFQQLLSSIE 260
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 87/208 (41%), Gaps = 36/208 (17%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS---- 278
+++ ARN + DE +K+ ++ + ++ + +S N +
Sbjct: 145 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNKTGAKLPV 201
Query: 279 --IASNVLDD----TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQIS 330
+A L TK D+ SFG + ++++ N+FD + + + Q
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPE 260
Query: 331 RCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
CP+ L +++ +C + RP+F+ ++
Sbjct: 261 YCPDPLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 97/251 (38%), Gaps = 38/251 (15%)
Query: 143 GVFGESQTAKWRG-TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
G FGE + G T V +K P + A +++L+H +++ L ++V
Sbjct: 30 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN---LMKQLQHQRLVR-LYAVVTQ 85
Query: 202 EEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------N 241
E + +ITEY+ G+L L ++L + L A IA N
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 145
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGYI 297
+L + KI ++ + E + A ++ K D+ SFG +
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 205
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSV--NFEPKFQISR---CPNRLKQLIAQCTNKDPSKRP 352
+++ + + M V N E +++ R CP L QL+ C + P RP
Sbjct: 206 LTEIVTHGRI----PYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRP 261
Query: 353 TFAAVIITLEE 363
TF + LE+
Sbjct: 262 TFDYLRSVLED 272
>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With
The Proteasome Subunit, Rpt3
pdb|2DZN|C Chain C, Crystal Structure Analysis Of Yeast Nas6p Complexed With
The Proteasome Subunit, Rpt3
pdb|2DZN|E Chain E, Crystal Structure Analysis Of Yeast Nas6p Complexed With
The Proteasome Subunit, Rpt3
pdb|2DZO|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With
The Proteasome Subunit, Rpt3
pdb|2DZO|C Chain C, Crystal Structure Analysis Of Yeast Nas6p Complexed With
The Proteasome Subunit, Rpt3
Length = 228
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQY-KANLNLKDRWQRTPLTDARLYG 92
++ G S ++D + LH AAS G ++ELL K+ +N +D+ TPL A G
Sbjct: 126 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 185
Query: 93 HRDICRILEVNGGKDF 108
H D +L G ++
Sbjct: 186 HGDAAVLLVEKYGAEY 201
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 50 TALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
T LHLA + + + L++ A++ +KD++ + PL A G + +L
Sbjct: 109 TCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELL 159
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 87/208 (41%), Gaps = 36/208 (17%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 142
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS---- 278
+++ ARN + DE +K+ ++ + ++ + +S N +
Sbjct: 143 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNKTGAKLPV 199
Query: 279 --IASNVLDD----TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQIS 330
+A L TK D+ SFG + ++++ N+FD + + + Q
Sbjct: 200 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPE 258
Query: 331 RCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
CP+ L +++ +C + RP+F+ ++
Sbjct: 259 YCPDPLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 87/208 (41%), Gaps = 36/208 (17%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 90 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 149
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS---- 278
+++ ARN + DE +K+ ++ + ++ + +S N +
Sbjct: 150 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNKTGAKLPV 206
Query: 279 --IASNVLDD----TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQIS 330
+A L TK D+ SFG + ++++ N+FD + + + Q
Sbjct: 207 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPE 265
Query: 331 RCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
CP+ L +++ +C + RP+F+ ++
Sbjct: 266 YCPDPLYEVMLKCWHPKAEMRPSFSELV 293
>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein
Gankyrin, An Interactor Of Rb And Cdk46
Length = 231
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQY-KANLNLKDRWQRTPLTDARLYG 92
++ G S ++D + LH AAS G ++ELL K+ +N +D+ TPL A G
Sbjct: 126 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 185
Query: 93 HRDICRILEVNGGKDF 108
H D +L G ++
Sbjct: 186 HGDAAVLLVEKYGAEY 201
Score = 28.9 bits (63), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 16 IGNFLSFASRGDRV---GLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKA 72
+GN S DR LN++ +G T LHLA + + + L++ A
Sbjct: 82 VGNLEVVKSLYDRPLKPDLNKITNQGV----------TCLHLAVGKKWFEVSQFLIENGA 131
Query: 73 NLNLKDRWQRTPLTDARLYGHRDICRIL 100
++ +KD++ + PL A G + +L
Sbjct: 132 SVRIKDKFNQIPLHRAASVGSLKLIELL 159
>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two
Different Crystal Forms
Length = 243
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQY-KANLNLKDRWQRTPLTDARLYG 92
++ G S ++D + LH AAS G ++ELL K+ +N +D+ TPL A G
Sbjct: 126 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 185
Query: 93 HRDICRILEVNGGKDF 108
H D +L G ++
Sbjct: 186 HGDAAVLLVEKYGAEY 201
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 50 TALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRIL 100
T LHLA + + + L++ A++ +KD++ + PL A G + +L
Sbjct: 109 TCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELL 159
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/208 (18%), Positives = 87/208 (41%), Gaps = 36/208 (17%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 145
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS---- 278
+++ ARN + DE +K+ ++ + ++ + +S N +
Sbjct: 146 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEFDSVHNKTGAKLPV 202
Query: 279 --IASNVLDD----TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQIS 330
+A L TK D+ SFG + ++++ N+FD + + + Q
Sbjct: 203 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPE 261
Query: 331 RCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
CP+ L +++ +C + RP+F+ ++
Sbjct: 262 YCPDPLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 34/249 (13%)
Query: 143 GVFGESQTAKWRG-TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
G FGE + G T V +K P + A +++L+H +++ L ++V
Sbjct: 24 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN---LMKQLQHQRLVR-LYAVVTQ 79
Query: 202 EEMILITEYLPKGNLKGILS--KKVRLDLPTALRYALDIAR------------------N 241
E + +ITEY+ G+L L ++L + L A IA N
Sbjct: 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGYI 297
+L + KI ++ + E + A ++ K D+ SFG +
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTF 354
+++ + + ++ N E +++ R CP L QL+ C + P RPTF
Sbjct: 200 LTEIVTHGRIPYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 257
Query: 355 AAVIITLEE 363
+ LE+
Sbjct: 258 DYLRSVLED 266
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 103/251 (41%), Gaps = 41/251 (16%)
Query: 143 GVFGESQTAKWRGTW---VVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIV 199
G FG+ + R + V+KT+ K P++ + + + L+ L HPNI++
Sbjct: 33 GAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIE--VLKSLDHPNIIKIFEVFE 90
Query: 200 LGEEMILITEYLPKGNL-KGILSKKVR-------------LDLPTALRY---------AL 236
M ++ E G L + I+S + R + AL Y L
Sbjct: 91 DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDL 150
Query: 237 DIARNLLQDEGDH--LKIGEYWVQMFYEQIHPNQENSQRNDNSSI--ASNVL--DDTKK- 289
L QD H +KI ++ + ++ + E+S +++ A V D T K
Sbjct: 151 KPENILFQDTSPHSPIKIIDFGLAELFK----SDEHSTNAAGTALYMAPEVFKRDVTFKC 206
Query: 290 DICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCP--NRLKQLIAQCTNKD 347
DI S G + Y +L G T S + + K+ EP + + P + L+ Q KD
Sbjct: 207 DIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKD 266
Query: 348 PSKRPTFAAVI 358
P +RP+ A V+
Sbjct: 267 PERRPSAAQVL 277
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 24/108 (22%)
Query: 140 VEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRE--------LRHPNI 191
+ +G +GE KWRG V VK+ + ++ RE +RH NI
Sbjct: 45 IGKGRYGEVWMGKWRGEKVA-----------VKVFFTTEEASWFRETEIYQTVLMRHENI 93
Query: 192 LQFLGSIVLG----EEMILITEYLPKGNLKGILSKKVRLDLPTALRYA 235
L F+ + + G ++ LIT+Y G+L L K LD + L+ A
Sbjct: 94 LGFIAADIKGTGSWTQLYLITDYHENGSLYDYL-KSTTLDAKSMLKLA 140
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 34/249 (13%)
Query: 143 GVFGESQTAKWRG-TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
G FGE + G T V +K P + A +++L+H +++ L ++V
Sbjct: 30 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN---LMKQLQHQRLVR-LYAVVTQ 85
Query: 202 EEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------N 241
E + +ITEY+ G+L L ++L + L A IA N
Sbjct: 86 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 145
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGYI 297
+L + KI ++ + E + A ++ K D+ SFG +
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 205
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTF 354
+++ + + ++ N E +++ R CP L QL+ C + P RPTF
Sbjct: 206 LTEIVTHGRIPYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 263
Query: 355 AAVIITLEE 363
+ LE+
Sbjct: 264 DYLRSVLED 272
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 54/249 (21%), Positives = 97/249 (38%), Gaps = 34/249 (13%)
Query: 143 GVFGESQTAKWRG-TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
G FGE + G T V +K P + A +++L+H +++ L ++V
Sbjct: 29 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN---LMKQLQHQRLVR-LYAVVTQ 84
Query: 202 EEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------N 241
E + +ITEY+ G+L L ++L + L A IA N
Sbjct: 85 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 144
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGYI 297
+L + KI ++ + E + A ++ K D+ SFG +
Sbjct: 145 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 204
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPTF 354
+++ + + ++ N E +++ R CP L QL+ C + P RPTF
Sbjct: 205 LTEIVTHGRIPYPGMTNPEVIQ--NLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 262
Query: 355 AAVIITLEE 363
+ LE+
Sbjct: 263 DYLRSVLED 271
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 97/251 (38%), Gaps = 38/251 (15%)
Query: 143 GVFGESQTAKWRG-TWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
G FGE + G T V +K P + A +++L+H +++ L ++V
Sbjct: 34 GQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEAN---LMKQLQHQRLVR-LYAVVTQ 89
Query: 202 EEMILITEYLPKGNLKGILSKK--VRLDLPTALRYALDIAR------------------N 241
E + +ITEY+ G+L L ++L + L A IA N
Sbjct: 90 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 149
Query: 242 LLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGYI 297
+L + KI ++ + E + A ++ K D+ SFG +
Sbjct: 150 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 209
Query: 298 FYQMLEGKHLQTNNSFDFMHLKSV--NFEPKFQISR---CPNRLKQLIAQCTNKDPSKRP 352
+++ + + M V N E +++ R CP L QL+ C + P RP
Sbjct: 210 LTEIVTHGRI----PYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRP 265
Query: 353 TFAAVIITLEE 363
TF + LE+
Sbjct: 266 TFDYLRSVLED 276
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 75/203 (36%), Gaps = 42/203 (20%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA------ 239
LRHPNIL+ G + LI EY P G + L K R D Y ++A
Sbjct: 69 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 240 ------------RNLLQDEGDHLKIGEY-WVQMFYEQIHPNQENSQRND--------NSS 278
NLL LKI ++ W +H +S+R
Sbjct: 129 HSKRVIHRDIKPENLLLGSNGELKIADFGW------SVH--APSSRRTTLCGTLDYLPPE 180
Query: 279 IASNVLDDTKKDICSFGYIFYQMLEGKHLQTNNSFD--FMHLKSVNFE-PKFQISRCPNR 335
+ + D K D+ S G + Y+ L G +++ + + V F P F
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGA--- 237
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
+ LI++ + S+R T A V+
Sbjct: 238 -RDLISRLLKHNASQRLTLAEVL 259
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 99/250 (39%), Gaps = 36/250 (14%)
Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIVL 200
G FGE W T+ T + P M + A + ++ L+H +++ L ++V
Sbjct: 199 GQFGEV----WMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK-LHAVVT 253
Query: 201 GEEMILITEYLPKGNLKGILS--KKVRLDLPTALRYALDIAR------------------ 240
E + +ITE++ KG+L L + + LP + ++ IA
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAA 313
Query: 241 NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGY 296
N+L KI ++ + E + A ++ K D+ SFG
Sbjct: 314 NILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGI 373
Query: 297 IFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPT 353
+ +++ + + ++++ E +++ R CP L ++ +C P +RPT
Sbjct: 374 LLMEIVTYGRIPYPGMSNPEVIRAL--ERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 431
Query: 354 FAAVIITLEE 363
F + L++
Sbjct: 432 FEYIQSVLDD 441
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 48/271 (17%)
Query: 116 VRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGT---WVVKTVIKSHIYHPVK 172
+ E+ S ++ I + LH M+ +G FG+ A+++ T + +K + K
Sbjct: 4 LNKERPSLQIKLKIEDFE-LHK-MLGKGSFGKVFLAEFKKTNQFFAIKALKKD------- 54
Query: 173 MVLSAKD-NCKLRELR-------HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKV 224
+VL D C + E R HP + + E + + EYL G+L +
Sbjct: 55 VVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH 114
Query: 225 RLDLPTALRYALDIA------------------RNLLQDEGDHLKIGEYWVQMFYEQIHP 266
+ DL A YA +I N+L D+ H+KI ++ M E +
Sbjct: 115 KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADF--GMCKENMLG 172
Query: 267 NQENSQRNDNSS-IASNVLDDTKK----DICSFGYIFYQMLEGKH-LQTNNSFDFMHLKS 320
+ + ++ IA +L K D SFG + Y+ML G+ + + H S
Sbjct: 173 DAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH--S 230
Query: 321 VNFEPKFQISRCPNRLKQLIAQCTNKDPSKR 351
+ + F K L+ + ++P KR
Sbjct: 231 IRMDNPFYPRWLEKEAKDLLVKLFVREPEKR 261
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 106/271 (39%), Gaps = 48/271 (17%)
Query: 116 VRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGT---WVVKTVIKSHIYHPVK 172
+ E+ S ++ I + LH M+ +G FG+ A+++ T + +K + K
Sbjct: 3 LNKERPSLQIKLKIEDF-ILHK-MLGKGSFGKVFLAEFKKTNQFFAIKALKKD------- 53
Query: 173 MVLSAKD-NCKLRELR-------HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKV 224
+VL D C + E R HP + + E + + EYL G+L +
Sbjct: 54 VVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH 113
Query: 225 RLDLPTALRYALDIA------------------RNLLQDEGDHLKIGEYWVQMFYEQIHP 266
+ DL A YA +I N+L D+ H+KI ++ M E +
Sbjct: 114 KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADF--GMCKENMLG 171
Query: 267 N-QENSQRNDNSSIASNVLDDTKK----DICSFGYIFYQMLEGKH-LQTNNSFDFMHLKS 320
+ + N IA +L K D SFG + Y+ML G+ + + H S
Sbjct: 172 DAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH--S 229
Query: 321 VNFEPKFQISRCPNRLKQLIAQCTNKDPSKR 351
+ + F K L+ + ++P KR
Sbjct: 230 IRMDNPFYPRWLEKEAKDLLVKLFVREPEKR 260
>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With
V-1
Length = 123
Score = 37.0 bits (84), Expect = 0.023, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 17/101 (16%)
Query: 5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIV 64
A +GD D + ++G+ V N+ L G P LH AA G I+
Sbjct: 14 ALKNGDLD-----EVKDYVAKGEDV--NRTLEGGRKP----------LHYAADCGQLEIL 56
Query: 65 ELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGG 105
E LL A++N D+ TPL A GH ++L G
Sbjct: 57 EFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGA 97
>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures
pdb|2MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, Minimized Average
Structure
pdb|2KXP|C Chain C, Solution Nmr Structure Of V-1 Bound To Capping Protein
(Cp)
Length = 118
Score = 37.0 bits (84), Expect = 0.023, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 17/101 (16%)
Query: 5 AAASGDFDMQVIGNFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIV 64
A +GD D + ++G+ V N+ L G P LH AA G I+
Sbjct: 9 ALKNGDLD-----EVKDYVAKGEDV--NRTLEGGRKP----------LHYAADCGQLEIL 51
Query: 65 ELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGG 105
E LL A++N D+ TPL A GH ++L G
Sbjct: 52 EFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGA 92
>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9
(Hasb9-2), An Ankyrin Repeat Protein
Length = 285
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A G ++ L ++ +G + N+ D + LH A GH V++LL++ A +N
Sbjct: 67 AIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWH 126
Query: 83 TPLTDARLYGHRDICRILEVNG 104
TPL +A + G D +L +G
Sbjct: 127 TPLFNACVSGSWDCVNLLLQHG 148
Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 44/101 (43%), Gaps = 10/101 (9%)
Query: 31 LNQMLREGTSPNVQ-DYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDAR 89
+N +L+ G S VQ + D + +H AA GH V L+ Y N++ K TPL A
Sbjct: 141 VNLLLQHGAS--VQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLAC 198
Query: 90 LYGHRDICRIL-----EVNGGKDFIHDQPLTVRNEKDSNEV 125
R + L +VN GK D PL S E+
Sbjct: 199 ENQQRACVKKLLESGADVNQGKG--QDSPLHAVVRTASEEL 237
>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting
Protein 14
pdb|3EU9|B Chain B, The Ankyrin Repeat Domain Of Huntingtin Interacting
Protein 14
pdb|3EU9|C Chain C, The Ankyrin Repeat Domain Of Huntingtin Interacting
Protein 14
Length = 240
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 20 LSFASRGDRVGLN-QMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L +A+R + + Q+++ G P++ D + + +HLAA GH IV L+ ++++ D
Sbjct: 80 LHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMD 139
Query: 79 RWQRTPLTDARLYGHR-DICRIL 100
+ TPL A H D R+L
Sbjct: 140 QNGMTPLMWAAYRTHSVDPTRLL 162
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 34 MLREGTSPNVQD-YDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
+L S N+ D Y K TALH A G+ ++ LLL+ AN++ ++
Sbjct: 162 LLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQN 207
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 50 TALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKDFI 109
T LH A +GH +V L++Y A+ +L D + + A +GH I L G +
Sbjct: 78 TPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDM 137
Query: 110 HDQ 112
DQ
Sbjct: 138 MDQ 140
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 99/250 (39%), Gaps = 36/250 (14%)
Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIVL 200
G FGE W T+ T + P M + A + ++ L+H +++ L ++V
Sbjct: 26 GQFGEV----WMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK-LHAVVT 80
Query: 201 GEEMILITEYLPKGNLKGILS--KKVRLDLPTALRYALDIAR------------------ 240
E + +ITE++ KG+L L + + LP + ++ IA
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAA 140
Query: 241 NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVLD----DTKKDICSFGY 296
N+L KI ++ + E + A ++ K D+ SFG
Sbjct: 141 NILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGI 200
Query: 297 IFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKDPSKRPT 353
+ +++ + + ++++ E +++ R CP L ++ +C P +RPT
Sbjct: 201 LLMEIVTYGRIPYPGMSNPEVIRAL--ERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 258
Query: 354 FAAVIITLEE 363
F + L++
Sbjct: 259 FEYIQSVLDD 268
>pdb|4F1P|A Chain A, Crystal Structure Of Mutant S554d For Arfgap And Ank
Repeat Domain Of Acap1
pdb|4F1P|B Chain B, Crystal Structure Of Mutant S554d For Arfgap And Ank
Repeat Domain Of Acap1
Length = 368
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G + N D R LH A GH + L L+ A+L +D R PLT A +
Sbjct: 254 LLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETAN 313
Query: 94 RDICRILEV 102
DI +L +
Sbjct: 314 ADIVTLLRL 322
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 65 ELLLQYKANLNLKDRWQRTPLTDARLYGHRDI-CRILEVN---GGKDFIHDQPLTVRNEK 120
E LLQ AN+N D R PL A + GH + C L+ G +D PLT+ E
Sbjct: 252 EFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMET 311
Query: 121 DSNEVNFDISELNTLHSSMVEQGVFGE 147
+ ++ + L + + QG G+
Sbjct: 312 ANADI-VTLLRLAKMREAEAAQGQAGD 337
>pdb|3JUE|A Chain A, Crystal Structure Of Arfgap And Ank Repeat Domain Of Acap1
pdb|3JUE|B Chain B, Crystal Structure Of Arfgap And Ank Repeat Domain Of Acap1
Length = 368
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G + N D R LH A GH + L L+ A+L +D R PLT A +
Sbjct: 254 LLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETAN 313
Query: 94 RDICRILEV 102
DI +L +
Sbjct: 314 ADIVTLLRL 322
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 65 ELLLQYKANLNLKDRWQRTPLTDARLYGHRDI-CRILEVN---GGKDFIHDQPLTVRNEK 120
E LLQ AN+N D R PL A + GH + C L+ G +D PLT+ E
Sbjct: 252 EFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMET 311
Query: 121 DSNEVNFDISELNTLHSSMVEQGVFGE 147
+ ++ + L + + QG G+
Sbjct: 312 ANADI-VTLLRLAKMREAEAAQGQAGD 337
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/205 (17%), Positives = 84/205 (40%), Gaps = 30/205 (14%)
Query: 183 LRELRHPNILQFLGSIVLGE-EMILITEYLPKGNLKGILSKKVR-----------LDLPT 230
+++ HPN+L LG + E +++ Y+ G+L+ + + L +
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 145
Query: 231 ALRYALD--------IARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASN 282
+++ ARN + DE +K+ ++ + + +++ +
Sbjct: 146 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWM 205
Query: 283 VLDD-------TKKDICSFGYIFYQMLE--GKHLQTNNSFDFMHLKSVNFEPKFQISRCP 333
L+ TK D+ SFG + ++++ N+FD + + + Q CP
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYLLQGRRLLQPEYCP 264
Query: 334 NRLKQLIAQCTNKDPSKRPTFAAVI 358
+ L +++ +C + RP+F+ ++
Sbjct: 265 DPLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|3T9K|A Chain A, Crystal Structure Of Acap1 C-portion Mutant S554d Fused
With Integrin Beta1 Peptide
pdb|3T9K|B Chain B, Crystal Structure Of Acap1 C-portion Mutant S554d Fused
With Integrin Beta1 Peptide
Length = 390
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGH 93
+L+ G + N D R LH A GH + L L+ A+L +D R PLT A +
Sbjct: 254 LLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETAN 313
Query: 94 RDICRILEV 102
DI +L +
Sbjct: 314 ADIVTLLRL 322
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Query: 47 DKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDI-CRILEVN-- 103
D T L A + E LLQ AN+N D R PL A + GH + C L+
Sbjct: 234 DNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGAD 293
Query: 104 -GGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGE 147
G +D PLT+ E + ++ + L + + QG G+
Sbjct: 294 LGARDSEGRDPLTIAMETANADI-VTLLRLAKMREAEAAQGQAGD 337
>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The
Ankyrin Repeat Domains Of Human Ankra2
Length = 183
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A+ G + +L+ G P + + +AL LA S+G+ IV++LL ++N D
Sbjct: 60 AAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGG 119
Query: 83 TPLTDARLYGHRDICRILEVNGGKD 107
TPL A ++G+ C + + G D
Sbjct: 120 TPLLYA-VHGNHVKCVKMLLESGAD 143
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%)
Query: 22 FASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQ 81
A++G+ + L + + N D + T L AA+ G +VE LLQ A+ L + +
Sbjct: 26 LAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGR 85
Query: 82 RTPLTDARLYGHRDICRIL 100
+ L+ A G+ DI ++L
Sbjct: 86 ESALSLACSKGYTDIVKML 104
>pdb|3SO8|A Chain A, Crystal Structure Of Ankra
Length = 162
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A+ G + +L+ G P + + +AL LA S+G+ IV++LL ++N D
Sbjct: 42 AAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGG 101
Query: 83 TPLTDARLYGHRDICRILEVNGGKD 107
TPL A ++G+ C + + G D
Sbjct: 102 TPLLYA-VHGNHVKCVKMLLESGAD 125
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%)
Query: 22 FASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQ 81
A++G+ + L + + N D + T L AA+ G +VE LLQ A+ L + +
Sbjct: 8 LAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGR 67
Query: 82 RTPLTDARLYGHRDICRIL 100
+ L+ A G+ DI ++L
Sbjct: 68 ESALSLACSKGYTDIVKML 86
>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The
Ankyrin Repeat Domains Of Human Ankra2
pdb|3V31|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The
Ankyrin Repeat Domains Of Human Ankra2
Length = 167
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQR 82
A+ G + +L+ G P + + +AL LA S+G+ IV++LL ++N D
Sbjct: 44 AAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGG 103
Query: 83 TPLTDARLYGHRDICRILEVNGGKD 107
TPL A ++G+ C + + G D
Sbjct: 104 TPLLYA-VHGNHVKCVKMLLESGAD 127
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%)
Query: 22 FASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQ 81
A++G+ + L + + N D + T L AA+ G +VE LLQ A+ L + +
Sbjct: 10 LAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGR 69
Query: 82 RTPLTDARLYGHRDICRIL 100
+ L+ A G+ DI ++L
Sbjct: 70 ESALSLACSKGYTDIVKML 88
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDL-------PTALRYA 235
++E ++++ LG + G+ ++I E + +G+LK L + +R ++ P +L
Sbjct: 73 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKM 131
Query: 236 LDIA----------------------RNLLQDEGDHLKIGEYWVQM-FYEQIHPNQENSQ 272
+ +A RN + E +KIG++ + YE + +
Sbjct: 132 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 191
Query: 273 RNDNSSIASNVLDD----TKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNF 323
++ L D T D+ SFG + +++ + L F+ +
Sbjct: 192 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD 251
Query: 324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
+P CP+ L +L+ C +P RP+F +I +++E
Sbjct: 252 KP----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 287
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDL-------PTALRYA 235
++E ++++ LG + G+ ++I E + +G+LK L + +R ++ P +L
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKM 134
Query: 236 LDIA----------------------RNLLQDEGDHLKIGEYWVQM-FYEQIHPNQENSQ 272
+ +A RN + E +KIG++ + YE + +
Sbjct: 135 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 194
Query: 273 RNDNSSIASNVLDD----TKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNF 323
++ L D T D+ SFG + +++ + L F+ +
Sbjct: 195 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD 254
Query: 324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
+P CP+ L +L+ C +P RP+F +I +++E
Sbjct: 255 KP----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 35.8 bits (81), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDL-------PTALRYA 235
++E ++++ LG + G+ ++I E + +G+LK L + +R ++ P +L
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKM 127
Query: 236 LDIA----------------------RNLLQDEGDHLKIGEYWVQM-FYEQIHPNQENSQ 272
+ +A RN + E +KIG++ + YE + +
Sbjct: 128 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 187
Query: 273 RNDNSSIASNVLDD----TKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNF 323
++ L D T D+ SFG + +++ + L F+ +
Sbjct: 188 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD 247
Query: 324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
+P CP+ L +L+ C +P RP+F +I +++E
Sbjct: 248 KP----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDL-------PTALRYA 235
++E ++++ LG + G+ ++I E + +G+LK L + +R ++ P +L
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKM 133
Query: 236 LDIA----------------------RNLLQDEGDHLKIGEYWVQM-FYEQIHPNQENSQ 272
+ +A RN + E +KIG++ + YE + +
Sbjct: 134 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 193
Query: 273 RNDNSSIASNVLDD----TKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNF 323
++ L D T D+ SFG + +++ + L F+ +
Sbjct: 194 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD 253
Query: 324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
+P CP+ L +L+ C +P RP+F +I +++E
Sbjct: 254 KP----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDL-------PTALRYA 235
++E ++++ LG + G+ ++I E + +G+LK L + +R ++ P +L
Sbjct: 104 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKM 162
Query: 236 LDIA----------------------RNLLQDEGDHLKIGEYWVQM-FYEQIHPNQENSQ 272
+ +A RN + E +KIG++ + YE + +
Sbjct: 163 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 222
Query: 273 RNDNSSIASNVLDD----TKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNF 323
++ L D T D+ SFG + +++ + L F+ +
Sbjct: 223 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD 282
Query: 324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
+P CP+ L +L+ C +P RP+F +I +++E
Sbjct: 283 KP----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 318
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 109/270 (40%), Gaps = 47/270 (17%)
Query: 139 MVEQGVFG---ESQTAKWRGTWVVKTV--IKSHIYHPVKMVLSAKDNCKLRELRHPNILQ 193
M+ +G FG E+Q + G++V V +K+ I + ++ ++E HP++ +
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 194 FLGSIVLGEEM------ILITEYLPKGNLKGIL------SKKVRLDLPTALRYALDIA-- 239
+G + ++I ++ G+L L L L T +R+ +DIA
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 240 ----------------RNLLQDEGDHLKIGEYWVQM------FYEQIHPNQENSQRNDNS 277
RN + E + + ++ + +Y Q ++ +
Sbjct: 150 MEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALE 209
Query: 278 SIASNVLDDTKKDICSFGYIFYQML---EGKHLQTNNSFDFMHLKSVNFEPKFQISRCPN 334
S+A N L D+ +FG ++++ + + N+ + +L N Q C
Sbjct: 210 SLADN-LYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLK--QPPECME 266
Query: 335 RLKQLIAQCTNKDPSKRPTFAAVIITLEEV 364
+ L+ QC + DP +RP+F + + LE +
Sbjct: 267 EVYDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDL-------PTALRYA 235
++E ++++ LG + G+ ++I E + +G+LK L + +R ++ P +L
Sbjct: 75 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKM 133
Query: 236 LDIA----------------------RNLLQDEGDHLKIGEYWVQM-FYEQIHPNQENSQ 272
+ +A RN + E +KIG++ + YE + +
Sbjct: 134 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 193
Query: 273 RNDNSSIASNVLDD----TKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNF 323
++ L D T D+ SFG + +++ + L F+ +
Sbjct: 194 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD 253
Query: 324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
+P CP+ L +L+ C +P RP+F +I +++E
Sbjct: 254 KP----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank
Length = 172
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL 85
+L G P++ ++ +AL LA++ G+ IV LLL+ ++N+ D TPL
Sbjct: 55 LLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPL 106
Score = 35.0 bits (79), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 20 LSFASRG---DRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNL 76
LS AS G D VGL +L N+ D++ T L A H VE LL A+L
Sbjct: 73 LSLASTGGYTDIVGL--LLERDVDINIYDWNGGTPLLYAVHGNHVKCVEALLARGADLTT 130
Query: 77 KDRWQRTPLTDARLYGHRDICRILE 101
+ TP+ A G+R + +++E
Sbjct: 131 EADSGYTPMDLAVALGYRKVQQVIE 155
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 50/256 (19%), Positives = 100/256 (39%), Gaps = 58/256 (22%)
Query: 143 GVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSA--KDNCKLRELRHPNILQFLGSIVL 200
G FGE W T+ T + P M + A + ++ L+H +++ L ++V
Sbjct: 193 GQFGEV----WMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK-LHAVVT 247
Query: 201 GEEMILITEYLPKGNLKGILS--KKVRLDLPTALRYALDIARNLLQDEGDHLKIGEYWVQ 258
E + +ITE++ KG+L L + + LP + ++ IA +
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGM---------------- 291
Query: 259 MFYEQ---IHPNQENSQRNDNSSIASNVLD-------------------------DTKKD 290
F EQ IH + + ++S+ + D K D
Sbjct: 292 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGSFTIKSD 351
Query: 291 ICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR---CPNRLKQLIAQCTNKD 347
+ SFG + +++ + + ++++ E +++ R CP L ++ +C
Sbjct: 352 VWSFGILLMEIVTYGRIPYPGMSNPEVIRAL--ERGYRMPRPENCPEELYNIMMRCWKNR 409
Query: 348 PSKRPTFAAVIITLEE 363
P +RPTF + L++
Sbjct: 410 PEERPTFEYIQSVLDD 425
>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The
Ankyrin Repeat Domains Of Human Rfxank
Length = 172
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 34 MLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL 85
+L G P++ ++ +AL LA++ G+ IV LLL+ ++N+ D TPL
Sbjct: 55 LLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPL 106
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 20 LSFASRG---DRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNL 76
LS AS G D VGL +L N+ D++ T L A H VE LL A+L
Sbjct: 73 LSLASTGGYTDIVGL--LLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT 130
Query: 77 KDRWQRTPLTDARLYGHRDICRILE 101
+ TP+ A G+R + +++E
Sbjct: 131 EADSGYTPMDLAVALGYRKVQQVIE 155
>pdb|3EHQ|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor
pdb|3EHQ|B Chain B, Crystal Structure Of Human Osteoclast Stimulating Factor
pdb|3EHR|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor
pdb|3EHR|B Chain B, Crystal Structure Of Human Osteoclast Stimulating Factor
Length = 222
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 23 ASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVE-LLLQYKANLNLKDRWQ 81
A RG+ L + L N D TAL+ A GH IVE L Q LN +++
Sbjct: 81 AKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEXLFTQPNIELNQQNKLG 140
Query: 82 RTPLTDARLYGHRDICRILEVNGGK 106
T L A G+ DI ++L G +
Sbjct: 141 DTALHAAAWKGYADIVQLLLAKGAR 165
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 39 TSPNV----QDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
T PN+ Q+ TALH AA +G+A IV+LLL A +L++
Sbjct: 127 TQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRN 170
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDL-------PTALRYA 235
++E ++++ LG + G+ ++I E + +G+LK L + +R ++ P +L
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKM 140
Query: 236 LDIA----------------------RNLLQDEGDHLKIGEYWVQM-FYEQIHPNQENSQ 272
+ +A RN + E +KIG++ + YE + +
Sbjct: 141 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 200
Query: 273 RNDNSSIASNVLDD----TKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNF 323
++ L D T D+ SFG + +++ + L F+ +
Sbjct: 201 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD 260
Query: 324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
+P CP+ L +L+ C +P RP+F +I +++E
Sbjct: 261 KP----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 91/219 (41%), Gaps = 42/219 (19%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL------------------SKKV 224
++E ++++ LG + G+ ++I E + +G+LK L SK +
Sbjct: 72 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 225 RL--DLPTALRYA-------LDIA-RNLLQDEGDHLKIGEYWVQM-FYEQIHPNQENSQR 273
++ ++ + Y D+A RN + E +KIG++ + YE + +
Sbjct: 132 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 191
Query: 274 NDNSSIASNVLDD----TKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNFE 324
++ L D T D+ SFG + +++ + L F+ + +
Sbjct: 192 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 251
Query: 325 PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
P CP+ L +L+ C +P RP+F +I +++E
Sbjct: 252 P----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 286
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 91/219 (41%), Gaps = 42/219 (19%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL------------------SKKV 224
++E ++++ LG + G+ ++I E + +G+LK L SK +
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 225 RL--DLPTALRYA-------LDIA-RNLLQDEGDHLKIGEYWVQM-FYEQIHPNQENSQR 273
++ ++ + Y D+A RN + E +KIG++ + YE + +
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 201
Query: 274 NDNSSIASNVLDD----TKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNFE 324
++ L D T D+ SFG + +++ + L F+ + +
Sbjct: 202 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK 261
Query: 325 PKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
P CP+ L +L+ C +P RP+F +I +++E
Sbjct: 262 P----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296
>pdb|4HBD|A Chain A, Crystal Structure Of Kank2 Ankyrin Repeats
Length = 276
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 42 NVQDYDKRTALHLAASEGHAPIVELLLQY-KANLNLKDRWQRTPLTDARLYGHRDICRIL 100
NVQD D TAL A GH I LLL +++L DR T L A G +I +L
Sbjct: 210 NVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASML 269
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/220 (19%), Positives = 89/220 (40%), Gaps = 44/220 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDL-------PTALRYA 235
++E ++++ LG + G+ ++I E + +G+LK L + +R ++ P +L
Sbjct: 69 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKM 127
Query: 236 LDIA----------------------RNLLQDEGDHLKIGEYWVQM-FYEQIHPNQENSQ 272
+ +A RN E +KIG++ + YE + +
Sbjct: 128 IQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKG 187
Query: 273 RNDNSSIASNVLDD----TKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNF 323
++ L D T D+ SFG + +++ + L F+ +
Sbjct: 188 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD 247
Query: 324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
+P CP+ L +L+ C +P RP+F +I +++E
Sbjct: 248 KP----DNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|2FO1|E Chain E, Crystal Structure Of The Csl-Notch-Mastermind Ternary
Complex Bound To Dna
Length = 373
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 37 EGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDI 96
+G++ + QD D +T + LAA EG +V L+Q A++ D T A+ H +I
Sbjct: 302 KGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQGASVEAVDATDHTARQLAQANNHHNI 361
Query: 97 CRILE 101
I +
Sbjct: 362 VDIFD 366
>pdb|1OY3|D Chain D, Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer Complex
Length = 282
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 49 RTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKD 107
RT LHLA A ++ELLL+ A+ + RTPL A L + + R+L +G +
Sbjct: 193 RTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPE 251
>pdb|1K3Z|D Chain D, X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodimer
Complex
Length = 282
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 49 RTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDARLYGHRDICRILEVNGGKD 107
RT LHLA A ++ELLL+ A+ + RTPL A L + + R+L +G +
Sbjct: 193 RTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPE 251
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 93/228 (40%), Gaps = 49/228 (21%)
Query: 183 LRELRHPNILQFLGSIVLGEEM--------ILITEYLPKGNLKGIL------SKKVRLDL 228
+++ HPN+++ LG + EM ++I ++ G+L L + + L
Sbjct: 90 MKDFSHPNVIRLLGVCI---EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL 146
Query: 229 PTALRYALDIA------------------RNLLQDEGDHLKIGEYWV-QMFYEQIHPNQE 269
T L++ +DIA RN + + + + ++ + + Y + Q
Sbjct: 147 QTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG 206
Query: 270 NSQRNDNSSIASNVLDD----TKKDICSFGYIFYQ-----MLEGKHLQTNNSFDFMHLKS 320
+ IA L D +K D+ +FG ++ M +Q + +D++
Sbjct: 207 RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYL---- 262
Query: 321 VNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEEVSACL 368
++ Q C + L +++ C DP RPTF+ + + LE++ L
Sbjct: 263 LHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/220 (18%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDL-------PTALRYA 235
++E ++++ LG + G+ ++I E + +G+LK L + +R ++ P +L
Sbjct: 76 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKM 134
Query: 236 LDIA----------------------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQ- 272
+ +A RN + E +KIG++ + + ++ +
Sbjct: 135 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKG 194
Query: 273 ----RNDNSSIASNVLDDTKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNF 323
R + + + T D+ SFG + +++ + L F+ +
Sbjct: 195 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD 254
Query: 324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
+P CP+ L +L+ C +P RP+F +I +++E
Sbjct: 255 KP----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/220 (18%), Positives = 90/220 (40%), Gaps = 44/220 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDL-------PTALRYA 235
++E ++++ LG + G+ ++I E + +G+LK L + +R ++ P +L
Sbjct: 67 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKM 125
Query: 236 LDIA----------------------RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQ- 272
+ +A RN + E +KIG++ + + ++ +
Sbjct: 126 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKG 185
Query: 273 ----RNDNSSIASNVLDDTKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNF 323
R + + + T D+ SFG + +++ + L F+ +
Sbjct: 186 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD 245
Query: 324 EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
+P CP+ L +L+ C +P RP+F +I +++E
Sbjct: 246 KP----DNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 281
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 33.9 bits (76), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 28/195 (14%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKV--RLDLPTALRYAL---- 236
L + P + ++ GS + ++ +I EYL G+ +L + T LR L
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLD 138
Query: 237 ----------DI-ARNLLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRNDNSSIASNV 283
DI A N+L E +K+ ++ V Q+ QI + N+ +A V
Sbjct: 139 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI---KRNTFVGTPFWMAPEV 195
Query: 284 LD----DTKKDICSFGYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQ 338
+ D+K DI S G ++ G+ + + + L N P + LK+
Sbjct: 196 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLE-GNYSKPLKE 254
Query: 339 LIAQCTNKDPSKRPT 353
+ C NK+PS RPT
Sbjct: 255 FVEACLNKEPSFRPT 269
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 80/195 (41%), Gaps = 28/195 (14%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKV--RLDLPTALRYAL---- 236
L + P + ++ GS + ++ +I EYL G+ +L + T LR L
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLD 118
Query: 237 ----------DI-ARNLLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRNDNSSIASNV 283
DI A N+L E +K+ ++ V Q+ QI + N+ +A V
Sbjct: 119 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI---KRNTFVGTPFWMAPEV 175
Query: 284 LD----DTKKDICSFGYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQ 338
+ D+K DI S G ++ G+ + + + L N P + LK+
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLE-GNYSKPLKE 234
Query: 339 LIAQCTNKDPSKRPT 353
+ C NK+PS RPT
Sbjct: 235 FVEACLNKEPSFRPT 249
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 79/222 (35%), Gaps = 47/222 (21%)
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVR----LDLPTALRYALDIAR--- 240
H N+L+ G + E +L+ Y+ G++ L ++ LD P R AL AR
Sbjct: 86 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 145
Query: 241 ------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASN 282
N+L DE +G++ + + + + R IA
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPE 205
Query: 283 VLD----DTKKDICSFGYIFYQMLEGKHL----QTNNSFDFMHL-------KSVNFEPKF 327
L K D+ +G + +++ G+ + N D M L K E
Sbjct: 206 YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALV 265
Query: 328 QISRCPN-------RLKQLIAQCTNKDPSKRPTFAAVIITLE 362
+ N +L Q+ CT P +RP + V+ LE
Sbjct: 266 DVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 87/221 (39%), Gaps = 49/221 (22%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYAL---------- 236
+H NI+ LG+ G +++ITEY G+L L +K R+ L T +A+
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV-LETDPAFAIANSTASTRDL 166
Query: 237 ----------------------DI-ARNLLQDEGDHLKIGEYWV--QMFYEQIHPNQENS 271
D+ ARN+L G KIG++ + + + + + N+
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 272 QRNDNSSIASNVLD---DTKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNF 323
+ ++ D + D+ S+G + +++ + N+ F +
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQM 286
Query: 324 -EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
+P F P + ++ C +P+ RPTF + L+E
Sbjct: 287 AQPAF----APKNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 9/59 (15%)
Query: 171 VKMVLSAKDNCK---------LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL 220
VK + A DN + L L+H +I++F G V G+ +I++ EY+ G+L L
Sbjct: 48 VKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 106
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTN 345
+K D SFG + +++ ++ + + L+ V + + CP + +++ QC
Sbjct: 239 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 298
Query: 346 KDPSKRPTFAAVIITLEEVSAC 367
P RP FA I LE + C
Sbjct: 299 HQPEDRPNFA---IILERIEYC 317
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTN 345
+K D SFG + +++ ++ + + L+ V + + CP + +++ QC
Sbjct: 239 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 298
Query: 346 KDPSKRPTFAAVIITLEEVSAC 367
P RP FA I LE + C
Sbjct: 299 HQPEDRPNFA---IILERIEYC 317
>pdb|2VGE|A Chain A, Crystal Structure Of The C-Terminal Region Of Human Iaspp
Length = 229
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 39/90 (43%)
Query: 19 FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
L A G+ + Q ++E P+ + + TALH A + IV+ L+ AN+N D
Sbjct: 25 LLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPD 84
Query: 79 RWQRTPLTDARLYGHRDICRILEVNGGKDF 108
TPL A IC L +G F
Sbjct: 85 SHGWTPLHCAASCNDTVICMALVQHGAAIF 114
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTN 345
+K D SFG + +++ ++ + + L+ V + + CP + +++ QC
Sbjct: 225 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 284
Query: 346 KDPSKRPTFAAVIITLEEVSAC 367
P RP FA I LE + C
Sbjct: 285 HQPEDRPNFA---IILERIEYC 303
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTN 345
+K D SFG + +++ ++ + + L+ V + + CP + +++ QC
Sbjct: 216 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 275
Query: 346 KDPSKRPTFAAVIITLEEVSAC 367
P RP FA I LE + C
Sbjct: 276 HQPEDRPNFA---IILERIEYC 294
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTN 345
+K D SFG + +++ ++ + + L+ V + + CP + +++ QC
Sbjct: 225 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 284
Query: 346 KDPSKRPTFAAVIITLEEVSAC 367
P RP FA I LE + C
Sbjct: 285 HQPEDRPNFA---IILERIEYC 303
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTN 345
+K D SFG + +++ ++ + + L+ V + + CP + +++ QC
Sbjct: 225 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 284
Query: 346 KDPSKRPTFAAVIITLEEVSAC 367
P RP FA I LE + C
Sbjct: 285 HQPEDRPNFA---IILERIEYC 303
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 69/186 (37%), Gaps = 23/186 (12%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNLLQD 245
L HPNIL+ + LI EY P+G L L K D ++A L+
Sbjct: 80 LHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYC 139
Query: 246 EGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIAS-----NVLDDTKKDIC-SFGYIFY 299
G ++ + I P IA + +K +C + Y+
Sbjct: 140 HGK---------KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPP 190
Query: 300 QMLEGKHLQTNNSFDFMHLKSVNFE-----PKFQISRCPNRLKQLIAQCTNKDPSKRPTF 354
+M+EG+ N D + + +E P F+ S N + I + K P+ PT
Sbjct: 191 EMIEGR--MHNEKVDLWCIGVLCYELLVGNPPFE-SASHNETYRRIVKVDLKFPASVPTG 247
Query: 355 AAVIIT 360
A +I+
Sbjct: 248 AQDLIS 253
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 87/221 (39%), Gaps = 49/221 (22%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYAL---------- 236
+H NI+ LG+ G +++ITEY G+L L +K R+ L T +A+
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRV-LETDPAFAIANSTLSTRDL 166
Query: 237 ----------------------DI-ARNLLQDEGDHLKIGEYWV--QMFYEQIHPNQENS 271
D+ ARN+L G KIG++ + + + + + N+
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 272 QRNDNSSIASNVLD---DTKKDICSFGYIFYQMLE-----GKHLQTNNSFDFMHLKSVNF 323
+ ++ D + D+ S+G + +++ + N+ F +
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQM 286
Query: 324 -EPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
+P F P + ++ C +P+ RPTF + L+E
Sbjct: 287 AQPAF----APKNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTN 345
+K D SFG + +++ ++ + + L+ V + + CP + +++ QC
Sbjct: 231 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 290
Query: 346 KDPSKRPTFAAVIITLEEVSAC 367
P RP FA I LE + C
Sbjct: 291 HQPEDRPNFA---IILERIEYC 309
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 79/222 (35%), Gaps = 47/222 (21%)
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVR----LDLPTALRYALDIAR--- 240
H N+L+ G + E +L+ Y+ G++ L ++ LD P R AL AR
Sbjct: 94 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 153
Query: 241 ------------------NLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASN 282
N+L DE +G++ + + + + R IA
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPE 213
Query: 283 VLD----DTKKDICSFGYIFYQMLEGKHL----QTNNSFDFMHL-------KSVNFEPKF 327
L K D+ +G + +++ G+ + N D M L K E
Sbjct: 214 YLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALV 273
Query: 328 QISRCPN-------RLKQLIAQCTNKDPSKRPTFAAVIITLE 362
+ N +L Q+ CT P +RP + V+ LE
Sbjct: 274 DVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTN 345
+K D SFG + +++ ++ + + L+ V + + CP + +++ QC
Sbjct: 239 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 298
Query: 346 KDPSKRPTFAAVIITLEEVSAC 367
P RP FA I LE + C
Sbjct: 299 HQPEDRPNFA---IILERIEYC 317
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTN 345
+K D SFG + +++ ++ + + L+ V + + CP + +++ QC
Sbjct: 242 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 301
Query: 346 KDPSKRPTFAAVIITLEEVSAC 367
P RP FA I LE + C
Sbjct: 302 HQPEDRPNFA---IILERIEYC 320
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTN 345
+K D SFG + +++ ++ + + L+ V + + CP + +++ QC
Sbjct: 224 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 283
Query: 346 KDPSKRPTFAAVIITLEEVSAC 367
P RP FA I LE + C
Sbjct: 284 HQPEDRPNFA---IILERIEYC 302
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL 220
++ + E +PNI++ LG +G+ M L+ EY+ G+L L
Sbjct: 99 REAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTN 345
+K D SFG + +++ ++ + + L+ V + + CP + +++ QC
Sbjct: 224 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 283
Query: 346 KDPSKRPTFAAVIITLEEVSAC 367
P RP FA I LE + C
Sbjct: 284 HQPEDRPNFA---IILERIEYC 302
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 28/195 (14%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKV--RLDLPTALRYAL---- 236
L + P + ++ GS + ++ +I EYL G+ +L + T LR L
Sbjct: 74 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLD 133
Query: 237 ----------DI-ARNLLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRNDNSSIASNV 283
DI A N+L E +K+ ++ V Q+ QI + N +A V
Sbjct: 134 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI---KRNXFVGTPFWMAPEV 190
Query: 284 LD----DTKKDICSFGYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQ 338
+ D+K DI S G ++ G+ + + + L N P + LK+
Sbjct: 191 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLE-GNYSKPLKE 249
Query: 339 LIAQCTNKDPSKRPT 353
+ C NK+PS RPT
Sbjct: 250 FVEACLNKEPSFRPT 264
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTN 345
+K D SFG + +++ ++ + + L+ V + + CP + +++ QC
Sbjct: 251 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 310
Query: 346 KDPSKRPTFAAVIITLEEVSAC 367
P RP FA I LE + C
Sbjct: 311 HQPEDRPNFA---IILERIEYC 329
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTN 345
+K D SFG + +++ ++ + + L+ V + + CP + +++ QC
Sbjct: 241 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 300
Query: 346 KDPSKRPTFAAVIITLEEVSAC 367
P RP FA I LE + C
Sbjct: 301 HQPEDRPNFA---IILERIEYC 319
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISR-CPNRLKQLIAQCTN 345
+K D SFG + +++ ++ + + L+ V + + CP + +++ QC
Sbjct: 265 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 324
Query: 346 KDPSKRPTFAAVIITLEEVSAC 367
P RP FA I LE + C
Sbjct: 325 HQPEDRPNFA---IILERIEYC 343
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 79/195 (40%), Gaps = 28/195 (14%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKV--RLDLPTALRYAL---- 236
L + P + ++ GS + ++ +I EYL G+ +L + T LR L
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLD 118
Query: 237 ----------DI-ARNLLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRNDNSSIASNV 283
DI A N+L E +K+ ++ V Q+ QI + N +A V
Sbjct: 119 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI---KRNXFVGTPFWMAPEV 175
Query: 284 LD----DTKKDICSFGYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQ 338
+ D+K DI S G ++ G+ + + + L N P + LK+
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLE-GNYSKPLKE 234
Query: 339 LIAQCTNKDPSKRPT 353
+ C NK+PS RPT
Sbjct: 235 FVEACLNKEPSFRPT 249
>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch
Receptor
pdb|1OT8|B Chain B, Structure Of The Ankyrin Domain Of The Drosophila Notch
Receptor
pdb|1OT8|C Chain C, Structure Of The Ankyrin Domain Of The Drosophila Notch
Receptor
Length = 239
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 32/72 (44%)
Query: 30 GLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDAR 89
+N +L + + QD T L LAA EG + LL AN + D R P A
Sbjct: 166 AVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVAS 225
Query: 90 LYGHRDICRILE 101
H DI R+L+
Sbjct: 226 ERLHHDIVRLLD 237
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 42 NVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPL 85
N D +TALH AA+ + V +LL + AN + +D TPL
Sbjct: 145 NAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPL 188
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPT 230
RHP+++ +G EMILI +Y+ GNLK L DLPT
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS---DLPT 133
>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease
Length = 285
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 24 SRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT 83
SR D V L +LR G P ++ + T LAA G +++L L A++N D + T
Sbjct: 50 SREDIVEL--LLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFT 107
Query: 84 PLTDARLYG 92
+A +YG
Sbjct: 108 AFMEAAVYG 116
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 19 FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
FL A G L L +G N D+ TA AA G ++ L + AN+NL+
Sbjct: 76 FLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRR 135
Query: 79 RWQR----------TPLTDARLYGHRDICRILEVNGGKD 107
+ + T L DA GH ++ +IL G D
Sbjct: 136 KTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD 174
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 31 LNQMLREGTSPNVQDYDKR-TALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDAR 89
+ Q+L G + N Q+ + T LH A IVELLL++ A+ L+ + TP A
Sbjct: 21 VQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAA 80
Query: 90 LYGHRDICRILEVNG 104
+ G + ++ G
Sbjct: 81 IAGSVKLLKLFLSKG 95
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLD 227
+R+ +H N+++ S ++GEE+ ++ E+L G L I+S +VRL+
Sbjct: 96 MRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-QVRLN 139
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPT 230
RHP+++ +G EMILI +Y+ GNLK L DLPT
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS---DLPT 133
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 30/190 (15%)
Query: 189 PNILQFLGSIVLGEEMILITEYLPKGN------------------LKGILSKKVRLDLPT 230
P I ++ GS + ++ +I EYL G+ L+ IL L
Sbjct: 77 PYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSER 136
Query: 231 ALRYALDIARNLLQDEGDHLKIGEYWV--QMFYEQIHPNQENSQRNDNSSIASNVLD--- 285
+ + A LL ++GD +K+ ++ V Q+ QI + N +A V+
Sbjct: 137 KIHRDIKAANVLLSEQGD-VKLADFGVAGQLTDTQI---KRNXFVGTPFWMAPEVIKQSA 192
Query: 286 -DTKKDICSFGYIFYQMLEGKHLQTN-NSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQC 343
D K DI S G ++ +G+ ++ + + L N P + + K+ + C
Sbjct: 193 YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLE-GQHSKPFKEFVEAC 251
Query: 344 TNKDPSKRPT 353
NKDP RPT
Sbjct: 252 LNKDPRFRPT 261
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 32.3 bits (72), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARN 241
+H NI+ LG+ G +++ITEY G+L L +K P L Y+ + + N
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK----RPPGLEYSYNPSHN 158
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 36/209 (17%)
Query: 190 NILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLD-----------LPTALRYALDI 238
++++ LG + G+ +++ E + G+LK L + +R + L ++ A +I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 239 A------------------RNLLQDEGDHLKIGEYWVQM-FYEQIHPNQENSQRNDNSSI 279
A RN + +KIG++ + YE + + +
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 280 ASNVLDD----TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF-QISRCPN 334
A L D T D+ SFG + +++ + LK V Q CP
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 335 RLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
R+ L+ C +P RPTF ++ L++
Sbjct: 260 RVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 183 LRELRHPNILQFLGSIV--LGEEMILITEYLPKGNLKGILSKKVR 225
LREL+HPNI+++ I+ + ++ EY G+L +++K +
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTK 103
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 183 LRELRHPNILQFLGSIV--LGEEMILITEYLPKGNLKGILSKKVR 225
LREL+HPNI+++ I+ + ++ EY G+L +++K +
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTK 103
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 142 QGVFGESQTAKWRGTW---VVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C + L H N+++F G
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINKMLNHENVVKFYGH 72
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 240 RNLLQDEGDHLKIGEY 255
NLL DE D+LKI ++
Sbjct: 133 ENLLLDERDNLKISDF 148
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 183 LRELRHPNILQFLGSIV--LGEEMILITEYLPKGNLKGILSKKVR 225
LREL+HPNI+++ I+ + ++ EY G+L +++K +
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTK 103
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 32.0 bits (71), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 142 QGVFGESQTAKWRGTW---VVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C + L H N+++F G
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINKMLNHENVVKFYGH 73
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 240 RNLLQDEGDHLKIGEY 255
NLL DE D+LKI ++
Sbjct: 134 ENLLLDERDNLKISDF 149
>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive
Signaling State
pdb|4G8K|B Chain B, Intact Sensor Domain Of Human Rnase L In The Inactive
Signaling State
pdb|4G8L|A Chain A, Active State Of Intact Sensor Domain Of Human Rnase L With
2-5a Bound
pdb|4G8L|B Chain B, Active State Of Intact Sensor Domain Of Human Rnase L With
2-5a Bound
pdb|4G8L|C Chain C, Active State Of Intact Sensor Domain Of Human Rnase L With
2-5a Bound
pdb|4G8L|D Chain D, Active State Of Intact Sensor Domain Of Human Rnase L With
2-5a Bound
Length = 337
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 24 SRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKDRWQRT 83
SR D V L +LR G P ++ + T LAA G +++L L A++N D + T
Sbjct: 70 SREDIVEL--LLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFT 127
Query: 84 PLTDARLYG 92
+A +YG
Sbjct: 128 AFMEAAVYG 136
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 31 LNQMLREGTSPNVQDYDKR-TALHLAASEGHAPIVELLLQYKANLNLKDRWQRTPLTDAR 89
+ Q+L G + N Q+ + T LH A IVELLL++ A+ L+ + TP A
Sbjct: 41 VQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAA 100
Query: 90 LYGHRDICRILEVNGG 105
+ G + ++ G
Sbjct: 101 IAGSVKLLKLFLSKGA 116
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 19 FLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
F+ A G L L +G N D+ TA AA G ++ L + AN+NL+
Sbjct: 96 FILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRR 155
Query: 79 RWQR----------TPLTDARLYGHRDICRILEVNGGKD 107
+ + T L DA GH ++ +IL G D
Sbjct: 156 KTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD 194
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPK----------GNLKGILSKKVRLDLPTAL 232
L+EL+H NI++ I + ++L+ E+L + G L+ + +K L L +
Sbjct: 54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 233 RYALD--------IARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVL 284
Y D +NLL + LKI ++ + + I + + A +VL
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPDVL 172
Query: 285 DDTKK-----DICSFGYIFYQMLEGKHL 307
+KK DI S G IF +M+ G L
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPL 200
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 32.0 bits (71), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 90/203 (44%), Gaps = 32/203 (15%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDIARN 241
+R+ +H N+++ S ++G+E+ ++ E+L G L I++ ++ + A+ A+ A +
Sbjct: 75 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 134
Query: 242 LLQDEG----------------DHLKIGEYWVQMFYEQIHPNQENSQRND--------NS 277
+L +G +K+ ++ F Q+ ++E +R
Sbjct: 135 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQV--SKEVPRRKXLVGTPYWMAP 189
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNN-SFDFMHLKSVNFEPKFQ-ISRCPNR 335
+ S + + DI S G + +M++G+ N M + N P+ + + +
Sbjct: 190 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS 249
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
LK + + +DP++R T A ++
Sbjct: 250 LKGFLDRLLVRDPAQRATAAELL 272
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPK----------GNLKGILSKKVRLDLPTAL 232
L+EL+H NI++ I + ++L+ E+L + G L+ + +K L L +
Sbjct: 54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 233 RYALD--------IARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVL 284
Y D +NLL + LKI ++ + + I + + A +VL
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPDVL 172
Query: 285 DDTKK-----DICSFGYIFYQMLEGKHL 307
+KK DI S G IF +M+ G L
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGAPL 200
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 113 PLTVRNEKDSNEVNFDISELNTLHSSMVEQ---GVFGESQTAKWRGTW-VVKTVIKSHIY 168
PL +N + + + E++ + +++ G FG + KWRG + V +IK
Sbjct: 2 PLGSKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM 61
Query: 169 HPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNL 216
+ + AK + L H ++Q G + +ITEY+ G L
Sbjct: 62 SEDEFIEEAK---VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 142 QGVFGESQTAKWRGT---WVVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C + L H N+++F G
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINKMLNHENVVKFYGH 72
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 240 RNLLQDEGDHLKIGEY 255
NLL DE D+LKI ++
Sbjct: 133 ENLLLDERDNLKISDF 148
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 142 QGVFGESQTAKWRGT---WVVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C + L H N+++F G
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINKMLNHENVVKFYGH 72
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 240 RNLLQDEGDHLKIGEY 255
NLL DE D+LKI ++
Sbjct: 133 ENLLLDERDNLKISDF 148
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 76/194 (39%), Gaps = 35/194 (18%)
Query: 142 QGVFGESQTAKWRGT---WVVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C + L H N+++F G
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINKMLNHENVVKFYGH 72
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQE---NSQRNDNSSIASNVLDDTK-----KDI 291
NLL DE D+LKI ++ + + + N+E N +A +L + D+
Sbjct: 133 ENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 292 CSFGYIFYQMLEGK 305
S G + ML G+
Sbjct: 191 WSCGIVLTAMLAGE 204
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Query: 113 PLTVRNEKDSNEVNFDISELNTLHSSMVEQ---GVFGESQTAKWRGTW-VVKTVIKSHIY 168
PL +N + + + E++ + +++ G FG + KWRG + V +IK
Sbjct: 2 PLGSKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM 61
Query: 169 HPVKMVLSAKDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNL 216
+ + AK + L H ++Q G + +ITEY+ G L
Sbjct: 62 SEDEFIEEAK---VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 142 QGVFGESQTAKWRGTW---VVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C + L H N+++F G
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINKMLNHENVVKFYGH 73
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 240 RNLLQDEGDHLKIGEY 255
NLL DE D+LKI ++
Sbjct: 134 ENLLLDERDNLKISDF 149
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 142 QGVFGESQTAKWRGTW---VVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C + L H N+++F G
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINKMLNHENVVKFYGH 73
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 240 RNLLQDEGDHLKIGEY 255
NLL DE D+LKI ++
Sbjct: 134 ENLLLDERDNLKISDF 149
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 142 QGVFGESQTAKWRGT---WVVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C + L H N+++F G
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINKMLNHENVVKFYGH 72
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 240 RNLLQDEGDHLKIGEY 255
NLL DE D+LKI ++
Sbjct: 133 ENLLLDERDNLKISDF 148
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 142 QGVFGESQTAKWRGTW---VVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C + L H N+++F G
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINKMLNHENVVKFYGH 73
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 240 RNLLQDEGDHLKIGEY 255
NLL DE D+LKI ++
Sbjct: 134 ENLLLDERDNLKISDF 149
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 142 QGVFGESQTAKWRGT---WVVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C + L H N+++F G
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINKMLNHENVVKFYGH 73
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 240 RNLLQDEGDHLKIGEY 255
NLL DE D+LKI ++
Sbjct: 134 ENLLLDERDNLKISDF 149
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 90/203 (44%), Gaps = 32/203 (15%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDIARN 241
+R+ +H N+++ S ++G+E+ ++ E+L G L I++ ++ + A+ A+ A +
Sbjct: 80 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 139
Query: 242 LLQDEG----------------DHLKIGEYWVQMFYEQIHPNQENSQRND--------NS 277
+L +G +K+ ++ F Q+ ++E +R
Sbjct: 140 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQV--SKEVPRRKXLVGTPYWMAP 194
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNN-SFDFMHLKSVNFEPKFQ-ISRCPNR 335
+ S + + DI S G + +M++G+ N M + N P+ + + +
Sbjct: 195 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS 254
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
LK + + +DP++R T A ++
Sbjct: 255 LKGFLDRLLVRDPAQRATAAELL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 90/203 (44%), Gaps = 32/203 (15%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDIARN 241
+R+ +H N+++ S ++G+E+ ++ E+L G L I++ ++ + A+ A+ A +
Sbjct: 71 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 130
Query: 242 LLQDEG----------------DHLKIGEYWVQMFYEQIHPNQENSQRND--------NS 277
+L +G +K+ ++ F Q+ ++E +R
Sbjct: 131 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQV--SKEVPRRKXLVGTPYWMAP 185
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNN-SFDFMHLKSVNFEPKFQ-ISRCPNR 335
+ S + + DI S G + +M++G+ N M + N P+ + + +
Sbjct: 186 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS 245
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
LK + + +DP++R T A ++
Sbjct: 246 LKGFLDRLLVRDPAQRATAAELL 268
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 142 QGVFGESQTAKWRGT---WVVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C + L H N+++F G
Sbjct: 15 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINKMLNHENVVKFYGH 71
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 131
Query: 240 RNLLQDEGDHLKIGEY 255
NLL DE D+LKI ++
Sbjct: 132 ENLLLDERDNLKISDF 147
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 142 QGVFGESQTAKWRGT---WVVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C + L H N+++F G
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINKMLNHENVVKFYGH 72
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 240 RNLLQDEGDHLKIGEY 255
NLL DE D+LKI ++
Sbjct: 133 ENLLLDERDNLKISDF 148
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPK----------GNLKGILSKKVRLDLPTAL 232
L+EL+H NI++ I + ++L+ E+L + G L+ + +K L L +
Sbjct: 54 LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 233 RYALD--------IARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVL 284
Y D +NLL + LKI ++ + + I + + A +VL
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIVTLWYRAPDVL 172
Query: 285 DDTKK-----DICSFGYIFYQMLEGKHL 307
+KK DI S G IF +M+ G L
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPL 200
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 90/203 (44%), Gaps = 32/203 (15%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDIARN 241
+R+ +H N+++ S ++G+E+ ++ E+L G L I++ ++ + A+ A+ A +
Sbjct: 82 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 141
Query: 242 LLQDEG----------------DHLKIGEYWVQMFYEQIHPNQENSQRND--------NS 277
+L +G +K+ ++ F Q+ ++E +R
Sbjct: 142 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQV--SKEVPRRKXLVGTPYWMAP 196
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNN-SFDFMHLKSVNFEPKFQ-ISRCPNR 335
+ S + + DI S G + +M++G+ N M + N P+ + + +
Sbjct: 197 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS 256
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
LK + + +DP++R T A ++
Sbjct: 257 LKGFLDRLLVRDPAQRATAAELL 279
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 142 QGVFGESQTAKWRGT---WVVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C + L H N+++F G
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINKMLNHENVVKFYGH 72
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 240 RNLLQDEGDHLKIGEY 255
NLL DE D+LKI ++
Sbjct: 133 ENLLLDERDNLKISDF 148
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 82/209 (39%), Gaps = 36/209 (17%)
Query: 190 NILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLD-----------LPTALRYALDI 238
++++ LG + G+ +++ E + G+LK L + +R + L ++ A +I
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEI 140
Query: 239 A------------------RNLLQDEGDHLKIGEYWVQM-FYEQIHPNQENSQRNDNSSI 279
A RN + +KIG++ + YE + + +
Sbjct: 141 ADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 280 ASNVLDD----TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF-QISRCPN 334
A L D T D+ SFG + +++ + LK V Q CP
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 260
Query: 335 RLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
R+ L+ C +P+ RPTF ++ L++
Sbjct: 261 RVTDLMRMCWQFNPNMRPTFLEIVNLLKD 289
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 142 QGVFGESQTAKWRGT---WVVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C + L H N+++F G
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINKMLNHENVVKFYGH 73
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 240 RNLLQDEGDHLKIGEY 255
NLL DE D+LKI ++
Sbjct: 134 ENLLLDERDNLKISDF 149
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 31.6 bits (70), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 142 QGVFGESQTAKWRGT---WVVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C + L H N+++F G
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINKMLNHENVVKFYGH 72
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 240 RNLLQDEGDHLKIGEY 255
NLL DE D+LKI ++
Sbjct: 133 ENLLLDERDNLKISDF 148
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 31.6 bits (70), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF-QISRCPNRLKQLIAQCTN 345
T D+ SFG + +++ + LK V Q CP R+ L+ C
Sbjct: 211 TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQ 270
Query: 346 KDPSKRPTFAAVIITLEE 363
+P+ RPTF ++ L++
Sbjct: 271 FNPNMRPTFLEIVNLLKD 288
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF-QISRCPNRLKQLIAQCTN 345
T D+ SFG + +++ + LK V Q CP R+ L+ C
Sbjct: 211 TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQ 270
Query: 346 KDPSKRPTFAAVIITLEE 363
+P+ RPTF ++ L++
Sbjct: 271 FNPNMRPTFLEIVNLLKD 288
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNL 242
LRHPNIL+ + + L+ E+ P+G L L K R D + + ++A L
Sbjct: 72 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 128
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 31.6 bits (70), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNL 242
LRHPNIL+ + + L+ E+ P+G L L K R D + + ++A L
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 186 LRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNL 242
LRHPNIL+ + + L+ E+ P+G L L K R D + + ++A L
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 90/203 (44%), Gaps = 32/203 (15%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDIARN 241
+R+ +H N+++ S ++G+E+ ++ E+L G L I++ ++ + A+ A+ A +
Sbjct: 125 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 184
Query: 242 LLQDEG----------------DHLKIGEYWVQMFYEQIHPNQENSQRND--------NS 277
+L +G +K+ ++ F Q+ ++E +R
Sbjct: 185 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQV--SKEVPRRKXLVGTPYWMAP 239
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNN-SFDFMHLKSVNFEPKFQ-ISRCPNR 335
+ S + + DI S G + +M++G+ N M + N P+ + + +
Sbjct: 240 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS 299
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
LK + + +DP++R T A ++
Sbjct: 300 LKGFLDRLLVRDPAQRATAAELL 322
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 76/194 (39%), Gaps = 35/194 (18%)
Query: 142 QGVFGESQTAKWRGT---WVVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C + L H N+++F G
Sbjct: 16 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINKMLNHENVVKFYGH 72
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 132
Query: 240 RNLLQDEGDHLKIGEYWVQMFYEQIHPNQE---NSQRNDNSSIASNVLDDTK-----KDI 291
NLL DE D+LKI ++ + + + N+E N +A +L + D+
Sbjct: 133 ENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDV 190
Query: 292 CSFGYIFYQMLEGK 305
S G + ML G+
Sbjct: 191 WSCGIVLTAMLAGE 204
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 36/209 (17%)
Query: 190 NILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLD-----------LPTALRYALDI 238
++++ LG + G+ +++ E + G+LK L + +R + L ++ A +I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 239 A------------------RNLLQDEGDHLKIGEYWVQM-FYEQIHPNQENSQRNDNSSI 279
A RN + +KIG++ + YE + + +
Sbjct: 140 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 280 ASNVLDD----TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF-QISRCPN 334
A L D T D+ SFG + +++ + LK V Q CP
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 259
Query: 335 RLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
R+ L+ C +P RPTF ++ L++
Sbjct: 260 RVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 143 GVFGESQTAKWRGTW-VVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
G FG + KWRG + V +IK + + AK + L H ++Q G
Sbjct: 15 GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAK---VMMNLSHEKLVQLYGVCTKQ 71
Query: 202 EEMILITEYLPKGNL 216
+ +ITEY+ G L
Sbjct: 72 RPIFIITEYMANGCL 86
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF-QISRCPNRLKQLIAQCTN 345
T D+ SFG + +++ + LK V Q CP R+ L+ C
Sbjct: 208 TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQ 267
Query: 346 KDPSKRPTFAAVIITLEE 363
+P RPTF ++ L++
Sbjct: 268 FNPKMRPTFLEIVNLLKD 285
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/203 (19%), Positives = 90/203 (44%), Gaps = 32/203 (15%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS-KKVRLDLPTALRYALDIARN 241
+R+ +H N+++ S ++G+E+ ++ E+L G L I++ ++ + A+ A+ A +
Sbjct: 202 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS 261
Query: 242 LLQDEG----------------DHLKIGEYWVQMFYEQIHPNQENSQRND--------NS 277
+L +G +K+ ++ F Q+ ++E +R
Sbjct: 262 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFG---FCAQV--SKEVPRRKXLVGTPYWMAP 316
Query: 278 SIASNVLDDTKKDICSFGYIFYQMLEGKHLQTNN-SFDFMHLKSVNFEPKFQ-ISRCPNR 335
+ S + + DI S G + +M++G+ N M + N P+ + + +
Sbjct: 317 ELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPS 376
Query: 336 LKQLIAQCTNKDPSKRPTFAAVI 358
LK + + +DP++R T A ++
Sbjct: 377 LKGFLDRLLVRDPAQRATAAELL 399
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 13/99 (13%)
Query: 119 EKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTW-VVKTVIKSHIYHPVKMVLSA 177
E D ++ F + EL T G FG + KWRG + V +IK + + A
Sbjct: 5 EIDPKDLTF-LKELGT--------GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEA 55
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNL 216
K + L H ++Q G + +ITEY+ G L
Sbjct: 56 K---VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 91
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 287 TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF-QISRCPNRLKQLIAQCTN 345
T D+ SFG + +++ + LK V Q CP R+ L+ C
Sbjct: 211 TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQ 270
Query: 346 KDPSKRPTFAAVIITLEE 363
+P RPTF ++ L++
Sbjct: 271 FNPKMRPTFLEIVNLLKD 288
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 25/149 (16%)
Query: 106 KDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKS 165
KD I+D + V I+ L S + +G FGE KWRG V
Sbjct: 17 KDLIYDMTTSGSGSGLPLLVQRTIARTIVLQES-IGKGRFGEVWRGKWRGEEVA------ 69
Query: 166 HIYHPVKMVLSAKDNCKLRE--------LRHPNILQFLGSI----VLGEEMILITEYLPK 213
VK+ S ++ RE LRH NIL F+ + ++ L+++Y
Sbjct: 70 -----VKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 124
Query: 214 GNLKGILSKKVRLDLPTALRYALDIARNL 242
G+L L++ + + ++ AL A L
Sbjct: 125 GSLFDYLNRYT-VTVEGMIKLALSTASGL 152
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 25/149 (16%)
Query: 106 KDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTVIKS 165
KD I+D + V I+ L S + +G FGE KWRG V
Sbjct: 4 KDLIYDMTTSGSGSGLPLLVQRTIARTIVLQES-IGKGRFGEVWRGKWRGEEVA------ 56
Query: 166 HIYHPVKMVLSAKDNCKLRE--------LRHPNILQFLGSI----VLGEEMILITEYLPK 213
VK+ S ++ RE LRH NIL F+ + ++ L+++Y
Sbjct: 57 -----VKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 111
Query: 214 GNLKGILSKKVRLDLPTALRYALDIARNL 242
G+L L++ + + ++ AL A L
Sbjct: 112 GSLFDYLNRYT-VTVEGMIKLALSTASGL 139
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 13/99 (13%)
Query: 119 EKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTW-VVKTVIKSHIYHPVKMVLSA 177
E D ++ F + EL T G FG + KWRG + V +IK + + A
Sbjct: 5 EIDPKDLTF-LKELGT--------GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEA 55
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNL 216
K + L H ++Q G + +ITEY+ G L
Sbjct: 56 K---VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 91
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 13/99 (13%)
Query: 119 EKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTW-VVKTVIKSHIYHPVKMVLSA 177
E D ++ F + EL T G FG + KWRG + V +IK + + A
Sbjct: 11 EIDPKDLTF-LKELGT--------GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEA 61
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNL 216
K + L H ++Q G + +ITEY+ G L
Sbjct: 62 K---VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 97
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/209 (20%), Positives = 81/209 (38%), Gaps = 36/209 (17%)
Query: 190 NILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLD-----------LPTALRYALDI 238
++++ LG + G+ +++ E + G+LK L + +R + L ++ A +I
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 239 A------------------RNLLQDEGDHLKIGEYWVQM-FYEQIHPNQENSQRNDNSSI 279
A RN + +KIG++ + YE + + +
Sbjct: 139 ADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 280 ASNVLDD----TKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKF-QISRCPN 334
A L D T D+ SFG + +++ + LK V Q CP
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPE 258
Query: 335 RLKQLIAQCTNKDPSKRPTFAAVIITLEE 363
R+ L+ C +P RPTF ++ L++
Sbjct: 259 RVTDLMRMCWQFNPKMRPTFLEIVNLLKD 287
>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex
pdb|1NFI|F Chain F, I-Kappa-B-AlphaNF-Kappa-B Complex
Length = 213
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 45 DYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
+Y+ T LHLA+ G+ IVELL+ A++N ++
Sbjct: 111 NYNGHTCLHLASIHGYLGIVELLVSLGADVNAQE 144
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 143 GVFGESQTAKWRGTW-VVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGSIVLG 201
G FG + KWRG + V +IK + + AK + L H ++Q G
Sbjct: 19 GQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAK---VMMNLSHEKLVQLYGVCTKQ 75
Query: 202 EEMILITEYLPKGNL 216
+ +ITEY+ G L
Sbjct: 76 RPIFIITEYMANGCL 90
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 65/141 (46%), Gaps = 29/141 (20%)
Query: 239 ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNS-----SIASNVLD---DTKKD 290
ARN+L E + +KI ++ + I+ N + ++ D ++ D TK D
Sbjct: 227 ARNILLSENNVVKICDFGLA---RDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSD 283
Query: 291 ICSFGYIFYQM--LEGK---HLQTNNSF-----DFMHLKSVNFEPKFQISRCPNRLKQLI 340
+ S+G + +++ L G +Q + F + M +++ P++ + Q++
Sbjct: 284 VWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRA----PEYSTPE----IYQIM 335
Query: 341 AQCTNKDPSKRPTFAAVIITL 361
C ++DP +RP FA ++ L
Sbjct: 336 LDCWHRDPKERPRFAELVEKL 356
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 187 RHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNLLQDE 246
+H NI+ LG+ G +++ITEY G+L L +K L +L D L +++
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQD-PEGLDKED 151
Query: 247 GDHLKI 252
G L++
Sbjct: 152 GRPLEL 157
>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex
Length = 236
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 45 DYDKRTALHLAASEGHAPIVELLLQYKANLNLKD 78
+Y+ T LHLA+ G+ IVELL+ A++N ++
Sbjct: 114 NYNGHTCLHLASIHGYLGIVELLVSLGADVNAQE 147
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 184 RELRHPNILQFLGSIVLGEEMILITEYLPKGNL 216
R LRHPNI++F I+ + +I EY G L
Sbjct: 71 RSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL 103
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK 223
H NI+ LG+ +G ++ITEY G+L L +K
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 121
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/192 (18%), Positives = 76/192 (39%), Gaps = 15/192 (7%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNL 242
L E P I+ F G+ E+ + E++ G+L +L K R+ + ++ + + L
Sbjct: 61 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGL 120
Query: 243 LQDEGDHLKIGEYWVQMFYEQIHP-----NQENSQRNDNSSIASNVLDDTKKD-ICSFGY 296
H ++ + + P N + + ++ ++D+ + + + Y
Sbjct: 121 TYLREKH--------KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSY 172
Query: 297 IFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKRPTFAA 356
+ + L+G H + M L V + R P + +L+ N+ P K P+
Sbjct: 173 MSPERLQGTHYSVQSDIWSMGLSLVEMAVG-RYPRPPMAIFELLDYIVNEPPPKLPSAVF 231
Query: 357 VIITLEEVSACL 368
+ + V+ CL
Sbjct: 232 SLEFQDFVNKCL 243
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK 223
H NI+ LG+ +G ++ITEY G+L L +K
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 137
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK 223
H NI+ LG+ +G ++ITEY G+L L +K
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 139
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK 223
H NI+ LG+ +G ++ITEY G+L L +K
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 144
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 188 HPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK 223
H NI+ LG+ +G ++ITEY G+L L +K
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK 144
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 184 RELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK 223
+ L+H NI+Q+LGS + + E +P G+L +L K
Sbjct: 74 KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK 113
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLD 227
L+ RHP+I++ I ++ ++ EY+ G L + K RLD
Sbjct: 70 LKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLD 114
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 25/136 (18%)
Query: 142 QGVFGESQTAKWRGT---WVVKTV-IKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLGS 197
+G +GE Q A R T VK V +K + P + K+ C L H N+++F G
Sbjct: 17 EGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI---KKEICINAMLNHENVVKFYGH 73
Query: 198 IVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------A 239
G L EY G L + + + P A R+ +
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKP 133
Query: 240 RNLLQDEGDHLKIGEY 255
NLL DE D+LKI ++
Sbjct: 134 ENLLLDERDNLKISDF 149
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 97/252 (38%), Gaps = 54/252 (21%)
Query: 139 MVEQGVFGESQTAKWRGT---WVVKTVIKSHIYHPV--KMVLSAKDNCKLRELRHPNILQ 193
++ +G FG+ A+ + + VK + K I K ++S + N L+ ++HP ++
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSER-NVLLKNVKHPFLVG 103
Query: 194 FLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA-------------- 239
S +++ + +Y+ G L L ++ P A YA +IA
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 163
Query: 240 ----RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS--------IASNVLD-- 285
N+L D H+ + ++ + +EN + N +S +A VL
Sbjct: 164 DLKPENILLDSQGHIVLTDFGL---------CKENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 286 --DTKKDICSFGYIFYQMLEG----KHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQL 339
D D G + Y+ML G T +D + K + +P N + L
Sbjct: 215 PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNIT-----NSARHL 269
Query: 340 IAQCTNKDPSKR 351
+ KD +KR
Sbjct: 270 LEGLLQKDRTKR 281
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 184 RELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKK 223
+ L+H NI+Q+LGS + + E +P G+L +L K
Sbjct: 60 KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSK 99
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 184 RELRHPNILQFLGSIVLGEEMILITEYLPKGNL 216
R LRHPNI++F I+ + ++ EY G L
Sbjct: 69 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 101
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 18/96 (18%)
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALD 237
K+ C + L H N+++F G G L EY G L + + + P A R+
Sbjct: 53 KEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 238 I------------------ARNLLQDEGDHLKIGEY 255
+ NLL DE D+LKI ++
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDF 148
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 184 RELRHPNILQFLGSIVLGEEMILITEYLPKGNL 216
R LRHPNI++F I+ + ++ EY G L
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 184 RELRHPNILQFLGSIVLGEEMILITEYLPKGNL 216
R LRHPNI++F I+ + ++ EY G L
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 184 RELRHPNILQFLGSIVLGEEMILITEYLPKGNL 216
R LRHPNI++F I+ + ++ EY G L
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 184 RELRHPNILQFLGSIVLGEEMILITEYLPKGNL 216
R LRHPNI++F I+ + ++ EY G L
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 53/137 (38%), Gaps = 27/137 (19%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKL-----RELRHPNILQFLG 196
+G +GE Q A R V + + I +K + +N K + L H N+++F G
Sbjct: 16 EGAYGEVQLAVNR---VTEEAVAVKIVD-MKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 197 SIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------ 238
G L EY G L + + + P A R+ +
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 239 ARNLLQDEGDHLKIGEY 255
NLL DE D+LKI ++
Sbjct: 132 PENLLLDERDNLKISDF 148
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 74/195 (37%), Gaps = 37/195 (18%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKL-----RELRHPNILQFLG 196
+G +GE Q A R V + + I +K + +N K + L H N+++F G
Sbjct: 16 EGAYGEVQLAVNR---VTEEAVAVKIVD-MKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 197 SIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------ 238
G L EY G L + + + P A R+ +
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 239 ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQE---NSQRNDNSSIASNVLDDTK-----KD 290
NLL DE D+LKI ++ + + + N+E N +A +L + D
Sbjct: 132 PENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMXGTLPYVAPELLKRREFHAEPVD 189
Query: 291 ICSFGYIFYQMLEGK 305
+ S G + ML G+
Sbjct: 190 VWSCGIVLTAMLAGE 204
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 18/137 (13%)
Query: 98 RILEVNGGKDFIHDQPLTVRNEKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTW 157
++++V G D ++ V + ++ ++ N ++ G FG+ A G
Sbjct: 14 QMVQVTGSSD---NEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYG-- 68
Query: 158 VVKTVIKSHIYHPVKMVLSAKDNCK----LRELR-------HPNILQFLGSIVLGEEMIL 206
+ KT + + VKM+ D+ + + EL+ H NI+ LG+ L + L
Sbjct: 69 ISKTGVSIQV--AVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYL 126
Query: 207 ITEYLPKGNLKGILSKK 223
I EY G+L L K
Sbjct: 127 IFEYCCYGDLLNYLRSK 143
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNL 242
L E++HP I+ + + G ++ LI EYL G L L ++ TA Y +I+ L
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIARNL 242
L E++HP I+ + + G ++ LI EYL G L L ++ TA Y +I+ L
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRY 234
LRE+RHPNI+ +++LI E + G L L++K L A ++
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 120
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 74/195 (37%), Gaps = 37/195 (18%)
Query: 142 QGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKL-----RELRHPNILQFLG 196
+G +GE Q A R V + + I +K + +N K + L H N+++F G
Sbjct: 17 EGAYGEVQLAVNR---VTEEAVAVKIVD-MKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 197 SIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDI------------------ 238
G L EY G L + + + P A R+ +
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 239 ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQE---NSQRNDNSSIASNVLDDTK-----KD 290
NLL DE D+LKI ++ + + + N+E N +A +L + D
Sbjct: 133 PENLLLDERDNLKISDFGLATVFR--YNNRERLLNKMXGTLPYVAPELLKRREFHAEPVD 190
Query: 291 ICSFGYIFYQMLEGK 305
+ S G + ML G+
Sbjct: 191 VWSCGIVLTAMLAGE 205
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRY 234
LRE+RHPNI+ +++LI E + G L L++K L A ++
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 134
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRY 234
LRE+RHPNI+ +++LI E + G L L++K L A ++
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 113
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 183 LRELRHPNILQFLG---SIVLGEE-MILITEYLPKGNLKGILSK 222
L+ L+HPNI++F S V G++ ++L+TE G LK L +
Sbjct: 79 LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKR 122
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 32/163 (19%)
Query: 172 KMVLSAKDNCK-------LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKV 224
K L +D + L E+ HP I++ + ++ LI ++L G+L LSK+V
Sbjct: 62 KATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV 121
Query: 225 RLDLPTALRYALDIA------------------RNLLQDEGDHLKIGEYWVQMFYEQI-H 265
Y ++A N+L DE H+K+ ++ + E I H
Sbjct: 122 MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDH 179
Query: 266 PNQENSQRNDNSSIASNVLD----DTKKDICSFGYIFYQMLEG 304
+ S +A V++ D SFG + ++ML G
Sbjct: 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 44/208 (21%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRL----------DLPTAL 232
++ L HPNI++ I + + L+ EY G + L R+ + +A+
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 233 RYA-------LDI-ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVL 284
+Y D+ A NLL D ++KI ++ F + + + + A+ L
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFG---FSNEFTFGNKLDEFCGSPPYAAPEL 183
Query: 285 DDTKK------DICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFE--------PKFQIS 330
KK D+ S G I Y ++ G + FD +LK + P + +
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSG-----SLPFDGQNLKELRERVLRGKYRIPFYMST 238
Query: 331 RCPNRLKQLIAQCTNKDPSKRPTFAAVI 358
C N LK+ + +PSKR T ++
Sbjct: 239 DCENLLKKFLIL----NPSKRGTLEQIM 262
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 90/240 (37%), Gaps = 30/240 (12%)
Query: 139 MVEQGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFL 195
++ +G FG+ K + T + +K + K I ++ + +N L+ RHP +
Sbjct: 17 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 76
Query: 196 GSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA---------------- 239
S + + + EY G L LS++ A Y +I
Sbjct: 77 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 136
Query: 240 ---RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSS-IASNVLDDTKK----DI 291
NL+ D+ H+KI ++ + E I +A VL+D D
Sbjct: 137 LKLENLMLDKDGHIKITDF--GLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 194
Query: 292 CSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR 351
G + Y+M+ G+ N + + + E +F + P K L++ KDP +R
Sbjct: 195 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE-AKSLLSGLLKKDPKQR 253
>pdb|2OC5|A Chain A, Crystal Structure Of A Ferritin-Like Protein (Pmt1231)
From Prochlorococcus Marinus Str. Mit 9313 At 1.68 A
Resolution
Length = 244
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 228 LPTALRYALDIARNLLQDEGDHLKIGEYWVQMFYEQ-----IHPNQEN----SQRNDNSS 278
+P + +A I +++DE HL GE W++ E + N+EN + D +
Sbjct: 140 IPVSDPFARKITEGVVKDEYTHLNYGEAWLKANLESCREELLEANRENLPLIRRXLDQVA 199
Query: 279 IASNVLDDTKKDICSFGYIFYQ 300
+ VL K+D+ I YQ
Sbjct: 200 GDAAVLQXDKEDLIEDFLIAYQ 221
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 90/240 (37%), Gaps = 30/240 (12%)
Query: 139 MVEQGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFL 195
++ +G FG+ K + T + +K + K I ++ + +N L+ RHP +
Sbjct: 15 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 74
Query: 196 GSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA---------------- 239
S + + + EY G L LS++ A Y +I
Sbjct: 75 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 134
Query: 240 ---RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQR-NDNSSIASNVLDDTKK----DI 291
NL+ D+ H+KI ++ + E I +A VL+D D
Sbjct: 135 LKLENLMLDKDGHIKITDF--GLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 192
Query: 292 CSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR 351
G + Y+M+ G+ N + + + E +F + P K L++ KDP +R
Sbjct: 193 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE-AKSLLSGLLKKDPKQR 251
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGIL 220
L L+H +I++F G G+ +I++ EY+ G+L L
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 108
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 90/240 (37%), Gaps = 30/240 (12%)
Query: 139 MVEQGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFL 195
++ +G FG+ K + T + +K + K I ++ + +N L+ RHP +
Sbjct: 16 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 75
Query: 196 GSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA---------------- 239
S + + + EY G L LS++ A Y +I
Sbjct: 76 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 135
Query: 240 ---RNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQR-NDNSSIASNVLDDTKK----DI 291
NL+ D+ H+KI ++ + E I +A VL+D D
Sbjct: 136 LKLENLMLDKDGHIKITDF--GLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 193
Query: 292 CSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR 351
G + Y+M+ G+ N + + + E +F + P K L++ KDP +R
Sbjct: 194 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE-AKSLLSGLLKKDPKQR 252
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 186 LRHPNILQFLGSIVLGE----EMILITEYLPKGNLKGILSKKV 224
++H NILQF+G+ G ++ LIT + KG+L L V
Sbjct: 75 MKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV 117
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 24/39 (61%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILS 221
+R+ H N++ S ++G+E+ ++ E+L G L I++
Sbjct: 96 MRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVT 134
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 25/145 (17%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA--- 239
L E+ HP I++ + ++ LI ++L G+L LSK+V Y ++A
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 140
Query: 240 ---------------RNLLQDEGDHLKIGEYWVQMFYEQI-HPNQENSQRNDNSSIASNV 283
N+L DE H+K+ ++ + E I H + S +A V
Sbjct: 141 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEV 198
Query: 284 LD----DTKKDICSFGYIFYQMLEG 304
++ D SFG + ++ML G
Sbjct: 199 VNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 25/145 (17%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA--- 239
L E+ HP I++ + ++ LI ++L G+L LSK+V Y ++A
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 240 ---------------RNLLQDEGDHLKIGEYWVQMFYEQI-HPNQENSQRNDNSSIASNV 283
N+L DE H+K+ ++ + E I H + S +A V
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEV 197
Query: 284 LD----DTKKDICSFGYIFYQMLEG 304
++ D SFG + ++ML G
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1AOP|A Chain A, Sulfite Reductase Structure At 1.6 Angstrom Resolution
pdb|2AOP|A Chain A, Sulfite Reductase: Reduced With Crii Edta, Siroheme Feii,
[4fe-4s] +1, Phosphate Bound
pdb|2GEP|A Chain A, Sulfite Reductase Hemoprotein, Oxidized, Siroheme Feiii
[4fe-4s] +2, Sulfite Complex
pdb|3AOP|A Chain A, Sulfite Reductase Hemoprotein Photoreduced With Proflavine
Edta, Siroheme Feii,[4fe-4s] +1, Phosphate Bound
pdb|3GEO|A Chain A, Sulfite Reductase Hemoprotein Nitrite Complex
pdb|4AOP|A Chain A, Sulfite Reductase Hemoprotein Partially Photoreduced With
Proflavine Edta, Phosphate Partially Bound
pdb|4GEP|A Chain A, Sulfite Reductase Hemoprotein Cyanide Complex Reduced With
Crii Edta
pdb|5AOP|A Chain A, Sulfite Reductase Structure Reduced With Crii Edta,
5-Coordinate Siroheme, Siroheme Feii, [4fe-4s] +1
pdb|5GEP|A Chain A, Sulfite Reductase Hemoprotein Carbon Monoxide Complex
Reduced With Crii Edta
pdb|6GEP|A Chain A, Sulfite Reductase Hemoprotein Nitric Oxide Complex Reduced
With Proflavine Edta
pdb|7GEP|A Chain A, Sulfite Reductase Hemoprotein In Complex With A Partially
Oxidized Sulfide Species
pdb|8GEP|A Chain A, Sulfite Reductase Hemoprotein Nitrate Complex
Length = 497
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 18 NFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
NF++ A G VG N ++ G S ++ +K+T A+ G+ P+ L +A + +
Sbjct: 163 NFVAIAENGKLVGFNLLVGGGLS--IEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQ 220
Query: 78 DRW-QRTPLTDAR 89
W RT +A+
Sbjct: 221 RDWGNRTDRKNAK 233
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 42/207 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRL----------DLPTAL 232
++ L HPNI++ I + + L+ EY G + L R+ + +A+
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 233 RYA-------LDI-ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVL 284
+Y D+ A NLL D ++KI ++ E N+ ++ A +
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPELF 184
Query: 285 -----DDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFE--------PKFQISR 331
D + D+ S G I Y ++ G + FD +LK + P + +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG-----SLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVI 358
C N LK+ + +PSKR T ++
Sbjct: 240 CENLLKKFLIL----NPSKRGTLEQIM 262
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 42/207 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRL----------DLPTAL 232
++ L HPNI++ I + + L+ EY G + L R+ + +A+
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 233 RYA-------LDI-ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVL 284
+Y D+ A NLL D ++KI ++ E N+ ++ A +
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPELF 184
Query: 285 -----DDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFE--------PKFQISR 331
D + D+ S G I Y ++ G + FD +LK + P + +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG-----SLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVI 358
C N LK+ + +PSKR T ++
Sbjct: 240 CENLLKKFLIL----NPSKRGTLEQIM 262
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 26/148 (17%)
Query: 119 EKDSNEVNFDISELNTLHSSMVEQGVFGESQTAKWRGTWVVKTV-IKSHIYHPVKMVLSA 177
E ++E + D+ L L ++ +G +G A ++G+ + V +K + + ++
Sbjct: 2 EAAASEPSLDLDNLKLLE--LIGRGRYG----AVYKGSLDERPVAVKVFSFANRQNFINE 55
Query: 178 KDNCKLRELRHPNILQFLGSIVLGEEMI---------LITEYLPKGNLKGILSKKVRLDL 228
K+ ++ + H NI +F ++G+E + L+ EY P G+L LS D
Sbjct: 56 KNIYRVPLMEHDNIARF----IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-DW 110
Query: 229 PTALRYALDIARNL--LQDE---GDHLK 251
++ R A + R L L E GDH K
Sbjct: 111 VSSCRLAHSVTRGLAYLHTELPRGDHYK 138
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 82/207 (39%), Gaps = 42/207 (20%)
Query: 183 LRELRHPNILQFLGSIVLGEEMILITEYLPKGNLKGILSKKVRL----------DLPTAL 232
++ L HPNI++ I + + L+ EY G + L R+ + +A+
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAV 126
Query: 233 RYA-------LDI-ARNLLQDEGDHLKIGEYWVQMFYEQIHPNQENSQRNDNSSIASNVL 284
+Y D+ A NLL D ++KI ++ E N+ ++ A +
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN--EFTFGNKLDTFCGSPPYAAPELF 184
Query: 285 -----DDTKKDICSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFE--------PKFQISR 331
D + D+ S G I Y ++ G + FD +LK + P + +
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSG-----SLPFDGQNLKELRERVLRGKYRIPFYMSTD 239
Query: 332 CPNRLKQLIAQCTNKDPSKRPTFAAVI 358
C N LK+ + +PSKR T ++
Sbjct: 240 CENLLKKFLIL----NPSKRGTLEQIM 262
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 91/240 (37%), Gaps = 30/240 (12%)
Query: 139 MVEQGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFL 195
++ +G FG+ K + T + +K + K I ++ + +N L+ RHP +
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 214
Query: 196 GSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA---------------- 239
S + + + EY G L LS++ A Y +I
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 274
Query: 240 ---RNLLQDEGDHLKIGEYWVQMFYEQIHPNQE-NSQRNDNSSIASNVLDDTKK----DI 291
NL+ D+ H+KI ++ + E I + +A VL+D D
Sbjct: 275 LKLENLMLDKDGHIKITDF--GLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 332
Query: 292 CSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR 351
G + Y+M+ G+ N + + + E +F + P K L++ KDP +R
Sbjct: 333 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE-AKSLLSGLLKKDPKQR 391
>pdb|4HTR|A Chain A, N149w Variant Of Sirhp Bound To Sulfite
Length = 507
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 18 NFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
NF++ A G VG N ++ G S ++ +K+T A+ G+ P+ L +A + +
Sbjct: 173 NFVAIAENGKLVGFNLLVGGGLS--IEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQ 230
Query: 78 DRW-QRTPLTDAR 89
W RT +A+
Sbjct: 231 RDWGNRTDRKNAK 243
>pdb|4G39|A Chain A, Mutational Analysis Of Sulfite Reductase Hemoprotein
Reveals The Mechanism For Coordinated Electron And
Proton Transfer
Length = 570
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 18 NFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
NF++ A G VG N ++ G S ++ +K+T A+ G+ P+ L +A + +
Sbjct: 236 NFVAIAENGKLVGFNLLVGGGLS--IEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQ 293
Query: 78 DRW-QRTPLTDAR 89
W RT +A+
Sbjct: 294 RDWGNRTDRKNAK 306
>pdb|4G38|A Chain A, Mutational Analysis Of Sulfite Reductase Hemoprotein
Reveals The Mechanism For Coordinated Electron And
Proton Transfer
Length = 570
Score = 28.5 bits (62), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 18 NFLSFASRGDRVGLNQMLREGTSPNVQDYDKRTALHLAASEGHAPIVELLLQYKANLNLK 77
NF++ A G VG N ++ G S ++ +K+T A+ G+ P+ L +A + +
Sbjct: 236 NFVAIAENGKLVGFNLLVGGGLS--IEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQ 293
Query: 78 DRW-QRTPLTDAR 89
W RT +A+
Sbjct: 294 RDWGNRTDRKNAK 306
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/107 (18%), Positives = 49/107 (45%), Gaps = 2/107 (1%)
Query: 137 SSMVEQGVFGESQTAKWRGTWVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFLG 196
++ +G FG+ +W G ++ +I + ++ ++ R+ RH N++ F+G
Sbjct: 38 GELIGKGRFGQVYHGRWHGEVAIR-LIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 197 SIVLGEEMILITEYLPKGNLKGIL-SKKVRLDLPTALRYALDIARNL 242
+ + + +IT L ++ K+ LD+ + A +I + +
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGM 143
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 91/240 (37%), Gaps = 30/240 (12%)
Query: 139 MVEQGVFGESQTAKWRGT---WVVKTVIKSHIYHPVKMVLSAKDNCKLRELRHPNILQFL 195
++ +G FG+ K + T + +K + K I ++ + +N L+ RHP +
Sbjct: 158 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 217
Query: 196 GSIVLGEEMILITEYLPKGNLKGILSKKVRLDLPTALRYALDIA---------------- 239
S + + + EY G L LS++ A Y +I
Sbjct: 218 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 277
Query: 240 ---RNLLQDEGDHLKIGEYWVQMFYEQIHPNQE-NSQRNDNSSIASNVLDDTKK----DI 291
NL+ D+ H+KI ++ + E I + +A VL+D D
Sbjct: 278 LKLENLMLDKDGHIKITDF--GLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 335
Query: 292 CSFGYIFYQMLEGKHLQTNNSFDFMHLKSVNFEPKFQISRCPNRLKQLIAQCTNKDPSKR 351
G + Y+M+ G+ N + + + E +F + P K L++ KDP +R
Sbjct: 336 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPE-AKSLLSGLLKKDPKQR 394
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,946,805
Number of Sequences: 62578
Number of extensions: 574012
Number of successful extensions: 2408
Number of sequences better than 100.0: 563
Number of HSP's better than 100.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 194
Number of HSP's that attempted gapping in prelim test: 1449
Number of HSP's gapped (non-prelim): 898
length of query: 464
length of database: 14,973,337
effective HSP length: 102
effective length of query: 362
effective length of database: 8,590,381
effective search space: 3109717922
effective search space used: 3109717922
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)