BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039022
(222 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225457937|ref|XP_002273919.1| PREDICTED: 60S ribosomal protein L24, mitochondrial [Vitis
vinifera]
gi|302142683|emb|CBI19886.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 164/222 (73%), Positives = 192/222 (86%), Gaps = 6/222 (2%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
MAFR +EMMKK+V+K+G K ++ESLKK VPDS++VM RAKRG++AG+HIQFGNRV
Sbjct: 1 MAFRSREMMKKIVKKMGDNK-----LEESLKKYVPDSKVVMGRAKRGIYAGRHIQFGNRV 55
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNKTRR+WKPNVQEKRLFSYI+DRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM
Sbjct: 56 SEDGGNKTRRSWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 115
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGG 180
DTEMGL+WK KIEK+YEELG+ +V FF+PE+E K EQ FK++KLA+RAARRE RR +YGG
Sbjct: 116 DTEMGLFWKAKIEKMYEELGEMDVVFFSPEDEVKFEQGFKELKLAERAARREARRHIYGG 175
Query: 181 SSKQKQIEQGSADTQETAEEAAKILSEGIPNEYAPEDLVANS 222
S KQ Q+E+G AD QET E AA++L EG + APE LVANS
Sbjct: 176 SGKQVQLEEGGADIQETNEVAARVL-EGSSHVDAPERLVANS 216
>gi|224142087|ref|XP_002324390.1| predicted protein [Populus trichocarpa]
gi|222865824|gb|EEF02955.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 143/177 (80%), Positives = 166/177 (93%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
MAFRGKEMMKK++ K+GGEKNLAPGVKE+LKK +P+S++VMNRAKRGLFAG+HIQFGN++
Sbjct: 1 MAFRGKEMMKKIMSKIGGEKNLAPGVKEALKKAIPNSKVVMNRAKRGLFAGRHIQFGNQI 60
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNK+RR+WKPNVQ+KRLFSYI+DRH+RVKVTTHA+RCIDKAGGIDEYLLKTPYHKM
Sbjct: 61 SEDGGNKSRRSWKPNVQDKRLFSYILDRHVRVKVTTHAIRCIDKAGGIDEYLLKTPYHKM 120
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQM 177
DTEMG+ WK KIEKLYEELG EV FFTPE EA L+QDFKDM+L QR AR++LRRQ+
Sbjct: 121 DTEMGILWKAKIEKLYEELGNMEVVFFTPEAEADLDQDFKDMRLEQREARKQLRRQI 177
>gi|388501160|gb|AFK38646.1| unknown [Lotus japonicus]
Length = 235
Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 155/235 (65%), Positives = 185/235 (78%), Gaps = 17/235 (7%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
MAFRGKEMMKK+++KVG EKNL P KESL+KC+P ++IVM RAKRGLFAG+HIQFGN V
Sbjct: 1 MAFRGKEMMKKVLKKVG-EKNLTPKAKESLQKCIPKTKIVMGRAKRGLFAGRHIQFGNTV 59
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNKTRRNWKPNVQ+KRLFSYI+DRHIR KVTTHALRCIDKAGGIDEYLLKTPYHKM
Sbjct: 60 SEDGGNKTRRNWKPNVQDKRLFSYILDRHIRAKVTTHALRCIDKAGGIDEYLLKTPYHKM 119
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGG 180
DTE+G+ WK KIEKLYEELG+ EV FF+PE+EA EQ FKD+KL++R AR+E+R+ MY G
Sbjct: 120 DTEIGVLWKAKIEKLYEELGKKEVVFFSPEDEANFEQSFKDLKLSEREARKEIRKIMYAG 179
Query: 181 SSKQKQI-----------EQGSADTQETAEEAAKILSEGIPNEY--APEDLVANS 222
K K I E G+ + +ET+ ++ K + +P Y AP+ L S
Sbjct: 180 MGKHKLIGVERKGDQSIEEGGTKNEEETSHDSTKRV---VPVSYVLAPDKLKIGS 231
>gi|255646903|gb|ACU23921.1| unknown [Glycine max]
Length = 235
Score = 315 bits (807), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 152/207 (73%), Positives = 174/207 (84%), Gaps = 1/207 (0%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
MAFRGKEMMKK+++ VG E L+ KESL++C+P S+IVMNRAKRGLFAGKHIQFGNRV
Sbjct: 1 MAFRGKEMMKKVLKTVG-ENGLSRREKESLERCLPRSKIVMNRAKRGLFAGKHIQFGNRV 59
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNK+RR WKPNVQEKRLFSYI+DRH+RVKVTTHALRCIDKAGGIDEYLLKTPYHKM
Sbjct: 60 SEDGGNKSRRTWKPNVQEKRLFSYILDRHVRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 119
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGG 180
DTEMG+ WK KIEKLYEELG EV FF+PE+E K EQ+F+D+KL++R AR+E+RR+MY G
Sbjct: 120 DTEMGILWKAKIEKLYEELGNKEVVFFSPEDEVKFEQEFEDLKLSEREARKEVRRKMYTG 179
Query: 181 SSKQKQIEQGSADTQETAEEAAKILSE 207
SKQK IE D Q E KI E
Sbjct: 180 MSKQKLIEVERKDDQCIDEGGNKIEGE 206
>gi|147865450|emb|CAN79404.1| hypothetical protein VITISV_028074 [Vitis vinifera]
Length = 1084
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/216 (73%), Positives = 187/216 (86%), Gaps = 6/216 (2%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
MAFR +EMMKK+V+K+G K ++ESLKK VPDS++VM RAKRG++AG+HIQFGNRV
Sbjct: 1 MAFRSREMMKKIVKKMGDNK-----LEESLKKYVPDSKVVMGRAKRGIYAGRHIQFGNRV 55
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNKTRR+WKPNVQEKRLFSYI+DRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM
Sbjct: 56 SEDGGNKTRRSWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 115
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGG 180
DTEMGL+WK KIEK+YEELG+ +V FF+PE+E K EQ FK++KLA+RAARRE RR +YGG
Sbjct: 116 DTEMGLFWKAKIEKMYEELGEMDVVFFSPEDEVKFEQGFKELKLAERAARREARRHIYGG 175
Query: 181 SSKQKQIEQGSADTQETAEEAAKILSEGIPNEYAPE 216
S KQ Q+E+G AD QET E AA++L EG + APE
Sbjct: 176 SGKQVQLEEGGADIQETNEVAARVL-EGSSHVDAPE 210
>gi|388514111|gb|AFK45117.1| unknown [Lotus japonicus]
Length = 235
Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/235 (65%), Positives = 187/235 (79%), Gaps = 17/235 (7%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
MAFRGKEMMKK+++KVG EKNL+P KESL+KC+P ++IVM RAKRGLFAG+HIQFGN V
Sbjct: 1 MAFRGKEMMKKVLKKVG-EKNLSPKSKESLQKCIPKTKIVMGRAKRGLFAGRHIQFGNTV 59
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNKTRRNWKPNVQ+KRLFSYI+DRHIR KVTTHALRCIDKAGGIDEYLLKTPYHKM
Sbjct: 60 SEDGGNKTRRNWKPNVQDKRLFSYILDRHIRAKVTTHALRCIDKAGGIDEYLLKTPYHKM 119
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGG 180
DTE+G+ W+ KIEKLYEELG+ EV FF+PE+EA EQ FKD+KL++R AR+E+R+ MY G
Sbjct: 120 DTEIGVLWRAKIEKLYEELGKKEVVFFSPEDEANFEQSFKDLKLSEREARKEIRKIMYAG 179
Query: 181 SSKQKQI-----------EQGSADTQETAEEAAKILSEGIPNEY--APEDLVANS 222
K K I E G+ + +ET+ +++K + +P Y AP+ L S
Sbjct: 180 MGKHKLIGVDRKDDQSIEEGGTKNEEETSHDSSKRV---VPVSYVLAPDKLKIGS 231
>gi|356539112|ref|XP_003538044.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Glycine
max]
Length = 235
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 148/204 (72%), Positives = 171/204 (83%), Gaps = 1/204 (0%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
MAFRGKEM+KK+++ VG E L+ KESL++C+P S+IVMNRAKRGLFAGKHIQFGNRV
Sbjct: 1 MAFRGKEMLKKVLKTVG-ENGLSRREKESLERCLPRSKIVMNRAKRGLFAGKHIQFGNRV 59
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNK+RR WKPNVQEKRLFSYI+DRH+RVK+TTHALRCIDKAGGIDEYL+KTPYHKM
Sbjct: 60 SEDGGNKSRRTWKPNVQEKRLFSYILDRHVRVKITTHALRCIDKAGGIDEYLMKTPYHKM 119
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGG 180
DTEMG+ WK KIEKLYEELG EV FF+PE+EAK EQ+F D+KL +R AR+E+RR+MY G
Sbjct: 120 DTEMGILWKAKIEKLYEELGNKEVVFFSPEDEAKFEQEFNDLKLTEREARKEVRRKMYTG 179
Query: 181 SSKQKQIEQGSADTQETAEEAAKI 204
SK K IE D Q E KI
Sbjct: 180 MSKHKLIEVERKDDQTIDEGGNKI 203
>gi|255573228|ref|XP_002527543.1| 60S ribosomal protein L24, mitochondrial precursor, putative
[Ricinus communis]
gi|223533093|gb|EEF34852.1| 60S ribosomal protein L24, mitochondrial precursor, putative
[Ricinus communis]
Length = 211
Score = 311 bits (798), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 151/221 (68%), Positives = 182/221 (82%), Gaps = 11/221 (4%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
MAFRG+EMMK +++KVG + NL+P VKESLKKC+PDS++VM RAKRG+FAG+HIQFGNRV
Sbjct: 1 MAFRGREMMKNVLKKVG-DNNLSPEVKESLKKCMPDSKVVMGRAKRGIFAGRHIQFGNRV 59
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNKTRR WKPNVQEKRLFSYI+DRHI+VKVTTHALRCIDKAGGIDEYLLKTPY KM
Sbjct: 60 SEDGGNKTRRTWKPNVQEKRLFSYILDRHIQVKVTTHALRCIDKAGGIDEYLLKTPYQKM 119
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGG 180
DT+MGL+WK KIEKLYE+LG+ E+ FF PE+EAK EQ KD+KLA+R ARRE R+QMY
Sbjct: 120 DTDMGLFWKAKIEKLYEDLGKREIVFFPPEDEAKFEQGLKDLKLAEREARREFRQQMYAR 179
Query: 181 SSKQKQIEQGSADTQETAEEAAKILSEGIPNEYAPEDLVAN 221
+K+KQ T E + +L+ ++Y P+ +VAN
Sbjct: 180 LAKEKQ-------TDEERSYVSFVLASA--DDY-PDKMVAN 210
>gi|449456779|ref|XP_004146126.1| PREDICTED: uncharacterized protein LOC101212331 [Cucumis sativus]
gi|449528875|ref|XP_004171427.1| PREDICTED: uncharacterized LOC101212331 [Cucumis sativus]
Length = 221
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/190 (79%), Positives = 176/190 (92%), Gaps = 1/190 (0%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
MAFRGKEMMKK+++KVG E NLAPGVK+SLKKC+PDS+IVM RA RG++AG+HI+FGNRV
Sbjct: 1 MAFRGKEMMKKILKKVG-ENNLAPGVKDSLKKCIPDSKIVMGRANRGIYAGRHIRFGNRV 59
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNK+RRNWKPNVQEKRLFSYI+DRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM
Sbjct: 60 SEDGGNKSRRNWKPNVQEKRLFSYILDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 119
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGG 180
DTE+GL+WK+KIE LYEELG+ EV FF+PE+E K EQ FK++KL++RAARRE RRQMYG
Sbjct: 120 DTELGLFWKSKIETLYEELGKMEVVFFSPEDEVKFEQRFKELKLSERAARREARRQMYGS 179
Query: 181 SSKQKQIEQG 190
S+K QI++G
Sbjct: 180 SAKLNQIKEG 189
>gi|297798834|ref|XP_002867301.1| ribosomal protein L28 family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313137|gb|EFH43560.1| ribosomal protein L28 family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 146/199 (73%), Positives = 170/199 (85%), Gaps = 6/199 (3%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
MAFRGKEMMKKLV++VG E N+ P +KE LK CVPD+++VM RAKRGL+AG+HIQ+GNRV
Sbjct: 1 MAFRGKEMMKKLVKRVGAE-NITPELKEKLKACVPDTKVVMGRAKRGLYAGRHIQYGNRV 59
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNK+RR WKPNVQEKRLFSYI DRHI+VKVTTHALRCIDKAGGIDEYLLKTPY KM
Sbjct: 60 SEDGGNKSRRCWKPNVQEKRLFSYIFDRHIKVKVTTHALRCIDKAGGIDEYLLKTPYQKM 119
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGG 180
DTEMGLYWKTK+E+ Y ELGQ EVAFFTPE+EAK EQ FKD+ +A++ ARRE RR+MYG
Sbjct: 120 DTEMGLYWKTKVEQRYAELGQMEVAFFTPEDEAKFEQGFKDLNIAKKDARREARRKMYG- 178
Query: 181 SSKQKQIEQGSADTQETAE 199
K+ +G AD + + E
Sbjct: 179 ----KKGGEGKADEEASIE 193
>gi|357436369|ref|XP_003588460.1| 50S ribosomal protein L28 [Medicago truncatula]
gi|355477508|gb|AES58711.1| 50S ribosomal protein L28 [Medicago truncatula]
Length = 232
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 141/198 (71%), Positives = 170/198 (85%), Gaps = 1/198 (0%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
MAFRGKEMMKK+++KVG +KNL P KES++K +P +++VM RAKRGLFAGKHIQFGN V
Sbjct: 1 MAFRGKEMMKKVLKKVG-DKNLTPRAKESIEKWLPKNKVVMGRAKRGLFAGKHIQFGNSV 59
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGN+TRR WKPNVQ+KRLFSYI+DRHIR+KVTTHALRCIDKAGGIDEYLLKTPY KM
Sbjct: 60 SEDGGNRTRRTWKPNVQDKRLFSYILDRHIRIKVTTHALRCIDKAGGIDEYLLKTPYQKM 119
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGG 180
DTE+G+ WK+KIEKLYEELG+ EV FF+PE+EAK EQ FKD++L++R AR+E+R+ M+
Sbjct: 120 DTEIGVLWKSKIEKLYEELGKKEVVFFSPEDEAKFEQGFKDLRLSEREARKEVRKIMHAS 179
Query: 181 SSKQKQIEQGSADTQETA 198
+K K IE S D E A
Sbjct: 180 MNKHKLIEVESKDGDEGA 197
>gi|15235960|ref|NP_194874.1| Ribosomal L28 family [Arabidopsis thaliana]
gi|15724234|gb|AAL06510.1|AF412057_1 AT4g31460/F3L17_30 [Arabidopsis thaliana]
gi|5262757|emb|CAB45905.1| putative protein [Arabidopsis thaliana]
gi|7270049|emb|CAB79864.1| putative protein [Arabidopsis thaliana]
gi|21593391|gb|AAM65340.1| unknown [Arabidopsis thaliana]
gi|30102482|gb|AAP21159.1| At4g31460/F3L17_30 [Arabidopsis thaliana]
gi|332660516|gb|AEE85916.1| Ribosomal L28 family [Arabidopsis thaliana]
Length = 212
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 141/185 (76%), Positives = 159/185 (85%), Gaps = 3/185 (1%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
MAFRGKEMMKKLV+KVG E N+ P +KE LK CVPD+++VM RAKRGL+AG+HIQ+GNRV
Sbjct: 1 MAFRGKEMMKKLVKKVGAE-NITPELKEKLKACVPDTKVVMGRAKRGLYAGRHIQYGNRV 59
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNK+RR WKPNVQEKRLFSYI D HI+VKVTTHALRCIDKAGGIDEYLLKTPY KM
Sbjct: 60 SEDGGNKSRRCWKPNVQEKRLFSYIFDSHIKVKVTTHALRCIDKAGGIDEYLLKTPYQKM 119
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMY-- 178
DTEMGLYWKTK+E Y ELGQ EVAFF PE+EAKLEQ FKD+ +A++ ARRE RR
Sbjct: 120 DTEMGLYWKTKVEARYAELGQMEVAFFNPEDEAKLEQGFKDLNIAKKDARREARRTFRKK 179
Query: 179 GGSSK 183
GG +K
Sbjct: 180 GGGNK 184
>gi|357122526|ref|XP_003562966.1| PREDICTED: uncharacterized protein LOC100831317 [Brachypodium
distachyon]
Length = 212
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 137/201 (68%), Positives = 164/201 (81%), Gaps = 2/201 (0%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
M+FR +E+ KK+VR+VGGE L + ES+K +P+S++VM RAKRG+FAG+HIQFGN+V
Sbjct: 1 MSFRAREIYKKVVRRVGGEGKLPAELMESVKNMMPNSKVVMGRAKRGIFAGRHIQFGNKV 60
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNK+RR+WKPNVQEKRLFSYI DRHIRVKVTTHALRCIDKAGGIDEYLLKTPY+KM
Sbjct: 61 SEDGGNKSRRHWKPNVQEKRLFSYIHDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYNKM 120
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGG 180
DTEMG+ WK KIEKLY EL EV FF PEEEAK+EQ F++++ A+R RRE RR +
Sbjct: 121 DTEMGIAWKAKIEKLYSELAGMEVGFFPPEEEAKIEQGFEEVRSAKREFRRESRRVL--A 178
Query: 181 SSKQKQIEQGSADTQETAEEA 201
+KQ Q+E G AD ET E A
Sbjct: 179 LAKQSQLEAGKADNDETTEVA 199
>gi|242050462|ref|XP_002462975.1| hypothetical protein SORBIDRAFT_02g035620 [Sorghum bicolor]
gi|241926352|gb|EER99496.1| hypothetical protein SORBIDRAFT_02g035620 [Sorghum bicolor]
Length = 210
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/199 (65%), Positives = 163/199 (81%), Gaps = 4/199 (2%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
M+FR +EM KK+VR+VGGE L + +S+K +PDS +VM RAKRG+FAG+HI+FGN+V
Sbjct: 1 MSFRAQEMYKKVVRRVGGEGKLPAELMKSVKDMLPDSNVVMGRAKRGIFAGRHIRFGNKV 60
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNK+RR+WKPNVQEKRLFSYI DRHIRVKVTTHALRCIDKAGGIDEYLLKTPY+KM
Sbjct: 61 SEDGGNKSRRSWKPNVQEKRLFSYIHDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYNKM 120
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGG 180
DTEMG+ WK KIEK+Y +L + EV FF PEEEAK+++ F +++ A+R RRE RR +
Sbjct: 121 DTEMGIVWKAKIEKMYSDLAEMEVGFFPPEEEAKIKEGFDEVRAAKRDFRREARRAL--- 177
Query: 181 SSKQKQIEQGSADTQETAE 199
+KQ+Q+E SA +T+E
Sbjct: 178 -AKQRQLEASSAGDDQTSE 195
>gi|115472627|ref|NP_001059912.1| Os07g0544900 [Oryza sativa Japonica Group]
gi|34393259|dbj|BAC83129.1| unknown protein [Oryza sativa Japonica Group]
gi|113611448|dbj|BAF21826.1| Os07g0544900 [Oryza sativa Japonica Group]
gi|125558698|gb|EAZ04234.1| hypothetical protein OsI_26378 [Oryza sativa Indica Group]
gi|125600612|gb|EAZ40188.1| hypothetical protein OsJ_24633 [Oryza sativa Japonica Group]
Length = 204
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/204 (65%), Positives = 164/204 (80%), Gaps = 4/204 (1%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
M+FR +EM KK+VR+VGGE L + S+K +PDS++VM RAKRG++AG+HIQFGN+V
Sbjct: 1 MSFRAREMYKKVVRRVGGEGKLPAELMASVKNLLPDSKVVMGRAKRGIYAGRHIQFGNKV 60
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNK+RR WKPNVQEKRLFSYI DRHIRVKVTTHALRCIDKAGGIDEYLLKTPY+KM
Sbjct: 61 SEDGGNKSRRTWKPNVQEKRLFSYIHDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYNKM 120
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGG 180
DTEMG+ WK KIEK+Y +L Q EV FF+PEEE K+EQ F++ RAA+RE RR+
Sbjct: 121 DTEMGVAWKAKIEKMYSQLAQMEVGFFSPEEETKIEQGFEE----ARAAKREHRREARRA 176
Query: 181 SSKQKQIEQGSADTQETAEEAAKI 204
+KQ Q+E G+A +TAE A+ +
Sbjct: 177 LAKQTQLEAGNAGGDKTAEAASNV 200
>gi|226507934|ref|NP_001149701.1| 60S ribosomal protein L24 [Zea mays]
gi|195629596|gb|ACG36439.1| 60S ribosomal protein L24 [Zea mays]
gi|414887008|tpg|DAA63022.1| TPA: 60S ribosomal protein L24 [Zea mays]
Length = 210
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 127/199 (63%), Positives = 162/199 (81%), Gaps = 4/199 (2%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
M+FR +EM KK+VR+VGGE L + +S+K +PDS ++M RAKRG+FAG+HI+FGN+V
Sbjct: 1 MSFRAREMYKKVVRRVGGEGKLPAELMKSVKDMLPDSNVIMGRAKRGIFAGRHIRFGNKV 60
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNK+RR+WKPNVQEKRLFSYI DRHIRVKVTTHALRCIDKAGGIDEYLLKTPY+KM
Sbjct: 61 SEDGGNKSRRSWKPNVQEKRLFSYIHDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYNKM 120
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGG 180
DTEMG+ WK KIEK+Y +LG+ EV FF PEEEAK+++ F +++ A++ RRE +R +
Sbjct: 121 DTEMGIVWKAKIEKMYSDLGEMEVGFFPPEEEAKVKEGFDEVRAAKKDFRREAKRAL--- 177
Query: 181 SSKQKQIEQGSADTQETAE 199
+KQ+Q+E SA + E
Sbjct: 178 -AKQRQLEASSAGDDQAGE 195
>gi|293333379|ref|NP_001168906.1| uncharacterized protein LOC100382712 [Zea mays]
gi|223973641|gb|ACN31008.1| unknown [Zea mays]
Length = 207
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/199 (61%), Positives = 158/199 (79%), Gaps = 4/199 (2%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
M+FR +EM KK+VR++GGE L + +S+K +PDS +VM RAKRG+FAG+HI+FGN+V
Sbjct: 1 MSFRAREMYKKVVRRLGGEGKLPAELMKSVKDILPDSNVVMGRAKRGIFAGRHIRFGNKV 60
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNK+RR+WKPNVQEKRLFSY+ D+HIRVKVTTHALRCIDKAGGIDEYLLKTPY+KM
Sbjct: 61 SEDGGNKSRRSWKPNVQEKRLFSYVHDQHIRVKVTTHALRCIDKAGGIDEYLLKTPYNKM 120
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGG 180
DTEMG+ WK IEK+Y +L + EV FF PE EAK+++ +++ A+R RRE RR +
Sbjct: 121 DTEMGIVWKANIEKMYSDLAEIEVGFFPPEVEAKIKKGLDEVRAAKRDFRREGRRAL--- 177
Query: 181 SSKQKQIEQGSADTQETAE 199
+KQ Q+E S +T+E
Sbjct: 178 -AKQSQLEASSVGDDQTSE 195
>gi|356544627|ref|XP_003540750.1| PREDICTED: uncharacterized protein LOC100785642 [Glycine max]
Length = 1177
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/138 (72%), Positives = 115/138 (83%)
Query: 67 KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
++RR WKPNVQEKRLFSYI+DRH+RVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMG+
Sbjct: 1008 QSRRTWKPNVQEKRLFSYILDRHVRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGI 1067
Query: 127 YWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGGSSKQKQ 186
WK KIEKLYEELG EV FF+PE+E K EQ+F+D+KL++R AR+E+RR+MY G SKQK
Sbjct: 1068 LWKAKIEKLYEELGNKEVVFFSPEDEVKFEQEFEDLKLSEREARKEVRRKMYTGMSKQKL 1127
Query: 187 IEQGSADTQETAEEAAKI 204
IE D Q E KI
Sbjct: 1128 IEVERKDDQCIDEGGNKI 1145
>gi|148906245|gb|ABR16278.1| unknown [Picea sitchensis]
Length = 222
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/174 (58%), Positives = 134/174 (77%), Gaps = 1/174 (0%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
MA R K M+K L+ K+ GE A + + +K +P ++ VM RAKRGL+ G+HIQFGN +
Sbjct: 1 MASRSKAMLKNLLPKIKGEGVSAEAI-AAWRKALPKNKCVMGRAKRGLYGGRHIQFGNNI 59
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
SEDGGNKTRR WKPNVQEKRLFS I+DR+IR+KVTTH LRCIDKAG ID+YLL+ P K+
Sbjct: 60 SEDGGNKTRRTWKPNVQEKRLFSLILDRYIRIKVTTHTLRCIDKAGCIDDYLLQMPVRKL 119
Query: 121 DTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELR 174
+ E+ L+WK KI++ YE+L + EV FF PEEE KLE+ F+ +K+A++A+R E R
Sbjct: 120 ENELALFWKVKIQQQYEKLSKMEVGFFPPEEEKKLEEAFERVKIARKASRAENR 173
>gi|413954010|gb|AFW86659.1| hypothetical protein ZEAMMB73_420910 [Zea mays]
Length = 145
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/133 (64%), Positives = 108/133 (81%), Gaps = 4/133 (3%)
Query: 67 KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
++RR+WKPNVQEKRLFSYI DRHIRVKVTTHALRCIDKAGGIDEYLLKTPY+KMDTEMG+
Sbjct: 2 RSRRSWKPNVQEKRLFSYIHDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYNKMDTEMGI 61
Query: 127 YWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGGSSKQKQ 186
WK KIEK+Y +LG+ EV FF PEEEAK+++ F +++ A++ RRE +R + +KQ+Q
Sbjct: 62 VWKAKIEKMYSDLGEMEVGFFPPEEEAKVKEGFDEVRAAKKDFRREAKRAL----AKQRQ 117
Query: 187 IEQGSADTQETAE 199
+E SA + E
Sbjct: 118 LEASSAGDDQAGE 130
>gi|413934459|gb|AFW69010.1| hypothetical protein ZEAMMB73_062727 [Zea mays]
Length = 158
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 102/133 (76%), Gaps = 4/133 (3%)
Query: 67 KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
++RR+WKPNVQEKRLFSY+ D+HIRVKVTTHALRCIDKAGGIDEYLLKTPY+KMDTEMG+
Sbjct: 15 RSRRSWKPNVQEKRLFSYVHDQHIRVKVTTHALRCIDKAGGIDEYLLKTPYNKMDTEMGI 74
Query: 127 YWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGGSSKQKQ 186
WK IEK+Y +L + EV FF PE EAK+++ +++ A+ RE RR + ++Q Q
Sbjct: 75 VWKANIEKMYSDLAEIEVGFFPPEVEAKIKKGLDEVRAAKIDFCREGRRAL----ARQSQ 130
Query: 187 IEQGSADTQETAE 199
+E S +T+E
Sbjct: 131 LEASSVGDDQTSE 143
>gi|168025860|ref|XP_001765451.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683301|gb|EDQ69712.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 108
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 69/108 (63%), Positives = 89/108 (82%)
Query: 37 SRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTT 96
+R+VM RAKRGL+AG+HIQFGN+VSEDGGNK+RR WKPNVQ KR+FS +DR+I++ +T
Sbjct: 1 ARVVMGRAKRGLYAGRHIQFGNQVSEDGGNKSRRTWKPNVQTKRIFSLGLDRYIKMNITM 60
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEELGQTEV 144
HALRCIDKAGG+DEYLL TP HK+D ++ W+T+I +Y +L EV
Sbjct: 61 HALRCIDKAGGLDEYLLTTPEHKLDNDLAREWRTRIAAVYNKLYTMEV 108
>gi|302755644|ref|XP_002961246.1| hypothetical protein SELMODRAFT_71657 [Selaginella moellendorffii]
gi|302772124|ref|XP_002969480.1| hypothetical protein SELMODRAFT_68550 [Selaginella moellendorffii]
gi|300162956|gb|EFJ29568.1| hypothetical protein SELMODRAFT_68550 [Selaginella moellendorffii]
gi|300172185|gb|EFJ38785.1| hypothetical protein SELMODRAFT_71657 [Selaginella moellendorffii]
Length = 113
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 89/113 (78%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
+I+M RAKRG+FAG+HIQFGN+VSE GGNKTRR WKPNV+ KRL+S+ +DR IRV VTTH
Sbjct: 1 KIIMGRAKRGIFAGRHIQFGNKVSEKGGNKTRRTWKPNVRLKRLYSFSLDRFIRVHVTTH 60
Query: 98 ALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEELGQTEVAFFTPE 150
ALRCIDKAGG+DEYLL P HK++ ++ LYWK +++ + L + + PE
Sbjct: 61 ALRCIDKAGGLDEYLLNKPDHKLENDLCLYWKRELQTMNRFLFKLQCGNVPPE 113
>gi|326494558|dbj|BAJ94398.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 164
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 67/96 (69%), Positives = 84/96 (87%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
M+FR +E+ KK+VR+VGGE L V +++K +P+S++VM RAKRG+FAG+HIQFGN+V
Sbjct: 57 MSFRAREIYKKVVRRVGGEGKLPAEVMDTVKSILPNSKVVMGRAKRGIFAGRHIQFGNKV 116
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTT 96
SEDGGNK+RRNWKPNVQEKRLFSYI DRHIRVKVT+
Sbjct: 117 SEDGGNKSRRNWKPNVQEKRLFSYIHDRHIRVKVTS 152
>gi|145346206|ref|XP_001417584.1| Putative mitochondrial ribosomal protein L28 [Ostreococcus
lucimarinus CCE9901]
gi|144577811|gb|ABO95877.1| Putative mitochondrial ribosomal protein L28 [Ostreococcus
lucimarinus CCE9901]
Length = 125
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 82/112 (73%), Gaps = 6/112 (5%)
Query: 22 LAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRL 81
LAP V+ +L +R+V +A+RGLFAGKHI+FGN VSEDGGNKTRR W PN Q+KR+
Sbjct: 5 LAPAVRRAL------ARVVQGKARRGLFAGKHIKFGNNVSEDGGNKTRRRWLPNAQKKRV 58
Query: 82 FSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIE 133
+S +++ I ++VT HALRC+DKAGG+DEY+L+T + + L K +++
Sbjct: 59 YSELLEEMIPMRVTAHALRCMDKAGGLDEYILRTRDQDLKSVFALELKERLK 110
>gi|412988338|emb|CCO17674.1| 50S ribosomal protein L24 [Bathycoccus prasinos]
Length = 181
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 72/96 (75%)
Query: 39 IVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHA 98
+V RAKRGL+ GK ++FGN VSEDGGNKTRR W PN + KRL+S +++R + ++VT HA
Sbjct: 39 VVCGRAKRGLYHGKTVRFGNNVSEDGGNKTRRKWSPNAKRKRLYSEVLNRMVPMQVTAHA 98
Query: 99 LRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
L+CIDKAGG+D Y+L TP KM + G+ K K+ +
Sbjct: 99 LKCIDKAGGLDNYVLNTPVAKMMSLKGMELKEKMTR 134
>gi|384253419|gb|EIE26894.1| hypothetical protein COCSUDRAFT_27303 [Coccomyxa subellipsoidea
C-169]
Length = 200
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 72/101 (71%)
Query: 33 CVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRV 92
V +R +M R++RGLFAGK + GN VSEDGGN+TRR WKPNVQ K L+S +DR +R+
Sbjct: 5 AVQAARTLMKRSRRGLFAGKTVLSGNNVSEDGGNRTRRIWKPNVQRKALYSEALDRMVRL 64
Query: 93 KVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIE 133
VTT A+R IDK GG+D YLL T K+ +++G K +I+
Sbjct: 65 NVTTAAMRTIDKYGGLDAYLLGTTDEKLASDVGSELKQQIK 105
>gi|307107886|gb|EFN56127.1| hypothetical protein CHLNCDRAFT_144754 [Chlorella variabilis]
Length = 146
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 68/90 (75%)
Query: 37 SRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTT 96
+R V NRA+RGL+AG+ + GN++SEDGGNKTRR WKPN KRL+S+I+ R + ++VT
Sbjct: 9 TRAVCNRARRGLYAGRRVLSGNQISEDGGNKTRRTWKPNSHNKRLYSHILARMVPLRVTA 68
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
ALR IDK GGID Y+L TP ++ +++ +
Sbjct: 69 AALRDIDKVGGIDAYILNTPDKQLQSDVAV 98
>gi|328868000|gb|EGG16381.1| hypothetical protein DFA_09412 [Dictyostelium fasciculatum]
Length = 146
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 70/104 (67%), Gaps = 1/104 (0%)
Query: 35 PDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKV 94
P +M R++RGL+ GK IQ+GN +S KTRRNWKPNVQ K FS+++D ++V V
Sbjct: 19 PHYANLMKRSQRGLYGGKLIQYGNIISF-SHKKTRRNWKPNVQAKTYFSHLLDAEVKVNV 77
Query: 95 TTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
TT+ +RCIDKAG D Y+LKT M +E+G K+ ++ + ++
Sbjct: 78 TTYTIRCIDKAGTFDNYILKTKNKDMASELGTDLKSVLKNVLKQ 121
>gi|384498809|gb|EIE89300.1| hypothetical protein RO3G_14011 [Rhizopus delemar RA 99-880]
Length = 126
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 37 SRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTT 96
+R RA+RGLF GKHIQFGN + KTRRNW PNVQ K L+S + + I VKVTT
Sbjct: 11 ARATFKRAQRGLFGGKHIQFGNN-NPFSKKKTRRNWLPNVQNKNLYSETLSKFIEVKVTT 69
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKI 132
LR IDK GG+D+YLL+T + +E L KTKI
Sbjct: 70 SVLRTIDKKGGLDKYLLETKDKNLFSEKALELKTKI 105
>gi|167535430|ref|XP_001749389.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772255|gb|EDQ85910.1| predicted protein [Monosiga brevicollis MX1]
Length = 140
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 71/97 (73%), Gaps = 4/97 (4%)
Query: 41 MNRAKRGLFAGKHIQFGNRVSEDGGN--KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHA 98
+NRA+RGL+AGK + FG + +ED + K+ + WKPNV EKR +S I+ R+ +VKVTT A
Sbjct: 18 INRAQRGLYAGKKVLFGVKSAEDKKSPIKSLKIWKPNVFEKRYYSDILKRYTKVKVTTKA 77
Query: 99 LRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKL 135
+RCIDKAGG D Y+L T K+D+E+G+ K ++E L
Sbjct: 78 IRCIDKAGGFDNYILMTQPEKLDSELGM--KLRVEML 112
>gi|384497350|gb|EIE87841.1| hypothetical protein RO3G_12552 [Rhizopus delemar RA 99-880]
Length = 131
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 37 SRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTT 96
+R RA+RGLF GKHIQFGN + KTRRNW PNVQ K L+S + + I VKVTT
Sbjct: 11 ARATFKRAQRGLFGGKHIQFGNN-NPFSKKKTRRNWLPNVQNKNLYSETLSKFIEVKVTT 69
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKI 132
LR IDK GG+D+YL++T + +E L K KI
Sbjct: 70 SVLRTIDKKGGLDKYLMETKDKNLFSEKALELKAKI 105
>gi|298715840|emb|CBJ28305.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 154
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 74/128 (57%), Gaps = 7/128 (5%)
Query: 16 VGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPN 75
VG + LA G K P R++ GL+AGK I FGN +S K RR WKPN
Sbjct: 9 VGCLQTLARGCKN------PKKPQHSKRSQIGLYAGKDIGFGNTISFSH-KKNRRTWKPN 61
Query: 76 VQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKL 135
VQ+K L+S +D I+ +TTHALRC+D+AGGID YLLKTP +++ G K KIE+
Sbjct: 62 VQKKALYSETLDEWIKFSLTTHALRCVDRAGGIDRYLLKTPDEWLNSVQGSKAKRKIEEA 121
Query: 136 YEELGQTE 143
G +
Sbjct: 122 LAARGDSS 129
>gi|387219621|gb|AFJ69519.1| hypothetical protein NGATSA_3029300 [Nannochloropsis gaditana
CCMP526]
Length = 147
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Query: 42 NRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
NRA+RGL+AGK + FGN+VS KTRR +KPN KRL+S + I +TT LR
Sbjct: 26 NRARRGLYAGKDVLFGNKVSH-SNRKTRRMFKPNAHHKRLWSDTLQDMIPFYLTTTTLRM 84
Query: 102 IDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKL 135
+DK GG+D YLL+TP HK+D+E G+ K +IE +
Sbjct: 85 VDKVGGLDNYLLQTPDHKLDSESGIKVKRRIENI 118
>gi|414887009|tpg|DAA63023.1| TPA: hypothetical protein ZEAMMB73_200944 [Zea mays]
Length = 102
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 69/93 (74%), Gaps = 2/93 (2%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
M+FR +EM KK+VR+VGGE L + +S+K +PDS ++M RAKRG+FAG+HI+FGN+V
Sbjct: 1 MSFRAREMYKKVVRRVGGEGKLPAELMKSVKDMLPDSNVIMGRAKRGIFAGRHIRFGNKV 60
Query: 61 SEDGGNKTRR--NWKPNVQEKRLFSYIMDRHIR 91
SEDGGNKT R ++ P ++ ++ ++ H+R
Sbjct: 61 SEDGGNKTDRSLSFLPFIRVFFSGAHSLEEHVR 93
>gi|281203401|gb|EFA77601.1| hypothetical protein PPL_12207 [Polysphondylium pallidum PN500]
Length = 142
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 35 PDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKV 94
P S ++ RA+R L+ G+ IQ+GN +S KTRR WKPNVQ K S I+++ I+V V
Sbjct: 19 PHSANILKRAQRALYGGRTIQYGNSISF-SHKKTRRTWKPNVQSKTYHSDILNQDIKVDV 77
Query: 95 TTHALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
TT+ +RCIDKAG D Y++ T +D+++G
Sbjct: 78 TTYTMRCIDKAGNFDNYIINTKDKDLDSKLG 108
>gi|452989807|gb|EME89562.1| hypothetical protein MYCFIDRAFT_160758, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 270
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 61/91 (67%), Gaps = 6/91 (6%)
Query: 28 ESLKKCVPD-----SRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLF 82
E+LK +P+ +R AK GL+ G+ +QFGN VSE KTRR W PN+ KRL+
Sbjct: 39 EALKDALPEYPYGPTRWYKQSAK-GLYGGQRVQFGNNVSEKFKTKTRRRWNPNIVTKRLW 97
Query: 83 SYIMDRHIRVKVTTHALRCIDKAGGIDEYLL 113
S ++RH++++VTT LR IDK GG+DEYLL
Sbjct: 98 SSALNRHVQIRVTTRVLRTIDKLGGLDEYLL 128
>gi|330794352|ref|XP_003285243.1| hypothetical protein DICPUDRAFT_22474 [Dictyostelium purpureum]
gi|325084785|gb|EGC38205.1| hypothetical protein DICPUDRAFT_22474 [Dictyostelium purpureum]
Length = 127
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 72/119 (60%), Gaps = 6/119 (5%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
VM RA+RGL+ GK I FGN +S KTRR+WKPNV K S ++ IRV+VT++ +
Sbjct: 15 VMKRAQRGLYGGKDILFGNILSF-SNKKTRRDWKPNVHNKTYHSNLLGTDIRVRVTSYVI 73
Query: 100 RCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQD 158
RCIDKAG D Y+++T + +E+G K ++ + + A E+EAK EQ+
Sbjct: 74 RCIDKAGSFDNYIVQTKDKDLQSELGSELKVAMKNVLK-----SKAIEILEQEAKQEQE 127
>gi|414590497|tpg|DAA41068.1| TPA: hypothetical protein ZEAMMB73_395437 [Zea mays]
Length = 188
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
M+FR +EM KK+VR++GGE L + +S+K +PDS +VM RAKRG+FAG+HI+FGN+V
Sbjct: 1 MSFRAREMYKKVVRRLGGEGKLPAELMKSVKDILPDSNVVMGRAKRGIFAGRHIRFGNKV 60
Query: 61 SEDGGNK 67
SEDGGNK
Sbjct: 61 SEDGGNK 67
>gi|66812698|ref|XP_640528.1| hypothetical protein DDB_G0281601 [Dictyostelium discoideum AX4]
gi|60468559|gb|EAL66562.1| hypothetical protein DDB_G0281601 [Dictyostelium discoideum AX4]
Length = 142
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R VM RA+RGL+ GK I F ++ S KTRR WKPNVQ K S ++D +IRV +TT+
Sbjct: 14 RSVMKRAQRGLYGGKDIIFSDQ-SSFSTRKTRRTWKPNVQTKTYHSDVLDSNIRVSLTTY 72
Query: 98 ALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
+RCIDKAG D Y++ T + +E+G
Sbjct: 73 TIRCIDKAGSFDNYIIHTKDKDLASELG 100
>gi|195615968|gb|ACG29814.1| hypothetical protein [Zea mays]
Length = 67
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 1 MAFRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRV 60
M+FR +EM KK+VR+VGGE L + +S+K +PDS ++M RAKRG+FAG+HI+FGN+V
Sbjct: 1 MSFRAREMYKKVVRRVGGEGKLPAELMKSVKDMLPDSNVIMGRAKRGIFAGRHIRFGNKV 60
Query: 61 SEDGGNK 67
SEDGGNK
Sbjct: 61 SEDGGNK 67
>gi|428176764|gb|EKX45647.1| hypothetical protein GUITHDRAFT_71217, partial [Guillardia theta
CCMP2712]
Length = 89
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
RA RGLF GK I FGN VS KTRR W PNVQ+KRL+S D I++++TT L+ I
Sbjct: 1 RADRGLFGGKKIGFGNNVSFSE-RKTRRTWMPNVQQKRLWSDCFDTMIKLRITTSVLKTI 59
Query: 103 DKAGGIDEYLLKTPYHKMDTEMGL 126
DK GG+D YL+ T K+D+ +G+
Sbjct: 60 DKHGGLDNYLVNTADVKLDSALGV 83
>gi|453089415|gb|EMF17455.1| hypothetical protein SEPMUDRAFT_146484 [Mycosphaerella populorum
SO2202]
Length = 337
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 50/68 (73%)
Query: 46 RGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKA 105
RGL+ G+ QFGN VS D KTRR WKPN+ ++LFS +DRH++V+V+ LR IDK
Sbjct: 58 RGLYGGQRKQFGNNVSGDFEVKTRRTWKPNIFTRKLFSRALDRHVQVRVSARVLRTIDKL 117
Query: 106 GGIDEYLL 113
GG+DEYLL
Sbjct: 118 GGLDEYLL 125
>gi|449016947|dbj|BAM80349.1| mitochondrial ribosomal protein L28 precursor [Cyanidioschyzon
merolae strain 10D]
Length = 116
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 35 PDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKV 94
P + + M R RGL+ G+HI+FGN++S NKTRR W+PNV K +S ++ +R V
Sbjct: 4 PSAALTMLRRFRGLYQGRHIRFGNQISH-AENKTRRAWRPNVHRKEFYSRVLQEPLRFTV 62
Query: 95 TTHALRCIDKAGGIDEYLLKT 115
TT ALR I+K GGIDEYL+ T
Sbjct: 63 TTRALRTIEKVGGIDEYLILT 83
>gi|393244367|gb|EJD51879.1| hypothetical protein AURDEDRAFT_111463 [Auricularia delicata
TFB-10046 SS5]
Length = 148
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
RA+ GLF G Q+GN V +KTRR W PN+Q KRL+S +D+ I++ +TT ALRCI
Sbjct: 17 RAQLGLFHGAMKQYGNNVPHSM-HKTRRTWLPNIQSKRLYSRTLDQWIKLSLTTRALRCI 75
Query: 103 DKAGGIDEYLLKT 115
DK GG+DEY++KT
Sbjct: 76 DKVGGLDEYIMKT 88
>gi|407917854|gb|EKG11156.1| Ribosomal protein L28 [Macrophomina phaseolina MS6]
Length = 236
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
++ GL+ G IQFGN VS+ KTRR W+PN+Q K LFS ++R +RV+V+T LR I
Sbjct: 53 QSNHGLYGGARIQFGNNVSKKTELKTRRQWRPNIQYKNLFSRALNRPVRVRVSTRVLRTI 112
Query: 103 DKAGGIDEYLL 113
DK GG+DEYLL
Sbjct: 113 DKVGGLDEYLL 123
>gi|389638764|ref|XP_003717015.1| 54S ribosomal protein L24 [Magnaporthe oryzae 70-15]
gi|351642834|gb|EHA50696.1| 54S ribosomal protein L24 [Magnaporthe oryzae 70-15]
gi|440476287|gb|ELQ44899.1| 54S ribosomal protein L24 [Magnaporthe oryzae Y34]
gi|440490588|gb|ELQ70132.1| 54S ribosomal protein L24 [Magnaporthe oryzae P131]
Length = 251
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 73/131 (55%), Gaps = 17/131 (12%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R ++ +GL+ I+FGN VSE KTRR W+PNVQ +RL+S + + IR +VTT
Sbjct: 70 RATYKQSNKGLYGSASIRFGNNVSEKYNVKTRRKWRPNVQTRRLYSESLGQMIRTRVTTR 129
Query: 98 ALRCIDKAGGIDEYLLKTPYHKMDTEMG-----LYWK----TKIEKLY----EELG---Q 141
LR IDK GG+D YLL T ++ ++G L W+ K+ ++ EELG Q
Sbjct: 130 VLRTIDKVGGLDNYLLGTKTQRLK-DLGPWGWRLRWRIMQTPKVRAMFARQREELGLPPQ 188
Query: 142 TEVAFFTPEEE 152
V F PE E
Sbjct: 189 GAVQEFLPEGE 199
>gi|358059694|dbj|GAA94563.1| hypothetical protein E5Q_01215 [Mixia osmundae IAM 14324]
Length = 380
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 8/101 (7%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ R + GLF GK ++GN V D +KTRR+W PN+Q K+L+S +++H+R+KVTT AL
Sbjct: 96 MFKRGQLGLFDGKVKRYGNNV-PDSHHKTRRSWLPNIQNKKLWSEALNQHLRMKVTTSAL 154
Query: 100 RCIDKAGGIDEYLLKTPYHKMDTEMGLY---WKTKIEKLYE 137
R IDK GG+D YL + D +GLY + KI Y+
Sbjct: 155 RTIDKCGGLDRYL----FRMRDDRLGLYGVQLRNKIASRYQ 191
>gi|169862685|ref|XP_001837968.1| mitochondrial 54S ribosomal protein domain-containing protein
[Coprinopsis cinerea okayama7#130]
gi|116500955|gb|EAU83850.1| 50S ribosomal protein L24 [Coprinopsis cinerea okayama7#130]
Length = 192
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 41 MNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALR 100
RA+ GLF GK IQ+GN V +KTRR W PNVQ KRL S ++ +R+KVTT ALR
Sbjct: 15 FKRAQFGLFGGKSIQYGNNVPFSK-HKTRRTWLPNVQRKRLDSEVLGEKVRIKVTTRALR 73
Query: 101 CIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIE 133
I K GG+D YL T HK+ GL K KI+
Sbjct: 74 TIKKYGGLDNYLKGTQSHKLSF-AGLDLKLKIK 105
>gi|156369464|ref|XP_001627996.1| predicted protein [Nematostella vectensis]
gi|156389150|ref|XP_001634855.1| predicted protein [Nematostella vectensis]
gi|156214961|gb|EDO35933.1| predicted protein [Nematostella vectensis]
gi|156221942|gb|EDO42792.1| predicted protein [Nematostella vectensis]
Length = 113
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 67/111 (60%), Gaps = 7/111 (6%)
Query: 25 GVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSY 84
G++ L K +P RA G++AGK I FG+ V G KT+R WKPNV K+ +S
Sbjct: 5 GLRFILLKTIPK------RAHAGIYAGKGIMFGH-VETFSGKKTKRAWKPNVHRKKYYSE 57
Query: 85 IMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKL 135
++++++ TTHA+RCIDKAGG D Y+L T K+ ++ + K + K+
Sbjct: 58 VLEKNLSYNFTTHAMRCIDKAGGFDNYILNTKDSKLQSKAAIELKNLMSKV 108
>gi|336467991|gb|EGO56154.1| hypothetical protein NEUTE1DRAFT_146910 [Neurospora tetrasperma
FGSC 2508]
gi|350289768|gb|EGZ70993.1| hypothetical protein NEUTE2DRAFT_92885 [Neurospora tetrasperma FGSC
2509]
Length = 261
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 83/159 (52%), Gaps = 25/159 (15%)
Query: 26 VKESLKKCVPD----SRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRL 81
V E K +P R V +++ GL+ I+FGN VS+ KTRR W+PNVQ+KRL
Sbjct: 57 VPEDFKIEIPSYPYGPRRVYHQSNTGLYGSALIRFGNNVSKRNEIKTRRKWRPNVQQKRL 116
Query: 82 FSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD--TEMG-----LYWKT---- 130
+S + +R +VTT LR IDK GG+DEYLL HK E+G L W+
Sbjct: 117 WSKSLGVFVRTRVTTRVLRTIDKVGGLDEYLLG---HKAARVKELGPWGWMLRWRIMQTP 173
Query: 131 ----KIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLA 165
+ K E LG + A EEE LE+ K+ ++A
Sbjct: 174 EIRERFAKEREALGLSPQA---KEEEKSLEEQLKEFQVA 209
>gi|300123327|emb|CBK24600.2| unnamed protein product [Blastocystis hominis]
Length = 115
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 37 SRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTT 96
SR RA+RGLF FGN VS KTRR+W PNV+ L+S +DR I ++VT+
Sbjct: 9 SRSTFKRARRGLFGTTEKLFGNNVSH-SERKTRRDWNPNVRHVHLYSETLDRKIGLRVTS 67
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKI 132
+ LRCIDKAGG+D Y+L T +++++ L + +I
Sbjct: 68 NTLRCIDKAGGLDYYVLNTKDKDLNSDVALRLREEI 103
>gi|154295457|ref|XP_001548164.1| hypothetical protein BC1G_13207 [Botryotinia fuckeliana B05.10]
gi|347441208|emb|CCD34129.1| similar to 50S ribosomal protein L24 [Botryotinia fuckeliana]
Length = 233
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 51/67 (76%)
Query: 47 GLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GL+ + I++GN VSE KTRR+W+PNVQ KRL+S + R I+++VTT LR IDKAG
Sbjct: 58 GLYGLQKIRYGNIVSEKNEIKTRRHWRPNVQRKRLYSPSLGRQIKLRVTTKVLRTIDKAG 117
Query: 107 GIDEYLL 113
G+DEYLL
Sbjct: 118 GLDEYLL 124
>gi|156048865|ref|XP_001590399.1| hypothetical protein SS1G_08139 [Sclerotinia sclerotiorum 1980]
gi|154692538|gb|EDN92276.1| hypothetical protein SS1G_08139 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 231
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 52/67 (77%)
Query: 47 GLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GL+ + I++GN VS+ KTRR+W+PNVQ KRL+S + +HI++++TT LR IDKAG
Sbjct: 56 GLYGLQKIRYGNIVSKKNEIKTRRHWRPNVQRKRLYSASLGKHIKLRITTKVLRTIDKAG 115
Query: 107 GIDEYLL 113
G+DEYLL
Sbjct: 116 GLDEYLL 122
>gi|396464665|ref|XP_003836943.1| similar to 50S ribosomal protein L24 [Leptosphaeria maculans JN3]
gi|312213496|emb|CBX93578.1| similar to 50S ribosomal protein L24 [Leptosphaeria maculans JN3]
Length = 490
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ +A +GL+ + IQFGN VS+ KTRR W+PNV K L+S ++ + I+++VT + L
Sbjct: 78 LFRQANKGLYGDQMIQFGNNVSKKTETKTRRVWRPNVLSKSLYSVVLKKKIKLRVTANVL 137
Query: 100 RCIDKAGGIDEYLLKTPYHKM 120
+ ID+ GG+DEYLLK H++
Sbjct: 138 KTIDREGGLDEYLLKDSEHRI 158
>gi|116205609|ref|XP_001228615.1| hypothetical protein CHGG_10688 [Chaetomium globosum CBS 148.51]
gi|88176816|gb|EAQ84284.1| hypothetical protein CHGG_10688 [Chaetomium globosum CBS 148.51]
Length = 254
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 15 KVGGEKNLAPGVKESLKKCVP---DSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRN 71
+V G P V P R V +++ GL+ I+FGN VSE KTRR
Sbjct: 43 RVPGSDIPIPSVTAPQHHIPPYPYGPRQVYHQSNTGLYGSARIRFGNNVSERNNIKTRRQ 102
Query: 72 WKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLL-KTPYHKMDTEMGLY-WK 129
W+PNV KRL+S + +R +VT LR +DKAGG+DEYLL +TP D +G + WK
Sbjct: 103 WRPNVHHKRLWSASLGVFVRTRVTARVLRTVDKAGGLDEYLLGRTPQRVRD--LGPWGWK 160
Query: 130 TK 131
+
Sbjct: 161 LR 162
>gi|342319907|gb|EGU11852.1| Hypothetical Protein RTG_02097 [Rhodotorula glutinis ATCC 204091]
Length = 152
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Query: 37 SRIVMN--RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKV 94
SR +N R + GL+ G+ I GN V E KTRR WKPNVQ+K L+ + RH+++KV
Sbjct: 12 SRAALNAKRLQTGLYEGRSIMSGNNVGEKIPVKTRRQWKPNVQQKNLWCEALGRHLKLKV 71
Query: 95 TTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIE 133
TT ALR IDK GG+D YL + K+ E+G+ + I+
Sbjct: 72 TTSALRTIDKCGGLDAYLFRMRPEKIG-EVGMLLREIIQ 109
>gi|169609064|ref|XP_001797951.1| hypothetical protein SNOG_07617 [Phaeosphaeria nodorum SN15]
gi|111063963|gb|EAT85083.1| hypothetical protein SNOG_07617 [Phaeosphaeria nodorum SN15]
Length = 470
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 57/89 (64%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ +A RGL+ + I FGN VSE KTRR+WKPNV K L+S + + I++++T+ L
Sbjct: 75 LFKQANRGLYGDQMIHFGNNVSEKTETKTRRDWKPNVLSKGLYSVALKKKIKLRITSRVL 134
Query: 100 RCIDKAGGIDEYLLKTPYHKMDTEMGLYW 128
+ +D+ GG+DEYLLK H++ L W
Sbjct: 135 KTMDREGGLDEYLLKDNEHRLKELGPLGW 163
>gi|367055734|ref|XP_003658245.1| hypothetical protein THITE_2124791 [Thielavia terrestris NRRL 8126]
gi|347005511|gb|AEO71909.1| hypothetical protein THITE_2124791 [Thielavia terrestris NRRL 8126]
Length = 263
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 15 KVGGEKNLAPGVKESLKKCVP---DSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRN 71
+V G P V + P R +++ GL+ I+FGN VSE+ K RR
Sbjct: 61 RVPGSDIPIPSVTAPHPEIPPYPYGPRPFYHQSNTGLYGTARIRFGNHVSEEHNTKARRK 120
Query: 72 WKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLL-KTP 116
W+PNVQ K L+S + +R +VTT LR IDKAGG+DEYLL +TP
Sbjct: 121 WRPNVQRKGLWSASLGVFVRTRVTTRVLRTIDKAGGLDEYLLGRTP 166
>gi|85110139|ref|XP_963282.1| hypothetical protein NCU08410 [Neurospora crassa OR74A]
gi|164423992|ref|XP_001728109.1| hypothetical protein NCU10866 [Neurospora crassa OR74A]
gi|28924956|gb|EAA34046.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|157070322|gb|EDO65018.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 274
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 26 VKESLKKCVPD----SRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRL 81
V E K +P R V +++ GL+ I+FGN VS+ KTRR W+PNVQ+KRL
Sbjct: 69 VPEDFKIEIPSYPYGPRRVYHQSNTGLYGSALIRFGNNVSKRNEIKTRRKWRPNVQQKRL 128
Query: 82 FSYIMDRHIRVKVTTHALRCIDKAGGIDEYLL 113
+S + +R +VTT LR IDK GG+DEYLL
Sbjct: 129 WSKSLGVFVRTRVTTRVLRTIDKVGGLDEYLL 160
>gi|449299035|gb|EMC95049.1| hypothetical protein BAUCODRAFT_73149, partial [Baudoinia
compniacensis UAMH 10762]
Length = 168
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 49/70 (70%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++ GL+ G+ IQFGN V KTRR W PNV K+LFS ++R+++V+VT LR ID
Sbjct: 59 SRLGLYGGQRIQFGNNVGTTFAVKTRRTWHPNVLTKKLFSKALNRYVQVRVTVKTLRTID 118
Query: 104 KAGGIDEYLL 113
K GG+DEYLL
Sbjct: 119 KLGGLDEYLL 128
>gi|406859670|gb|EKD12733.1| 50S ribosomal protein l24 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 270
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 53/74 (71%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ ++ GL+ + I+FGN VSE KTRR+W+PNV KRL+S + R++R+++TT L
Sbjct: 49 IYKQSNFGLYGTQKIRFGNIVSEKNEIKTRRHWRPNVHSKRLWSDALQRYLRLRITTRVL 108
Query: 100 RCIDKAGGIDEYLL 113
R +DK GG+DEYLL
Sbjct: 109 RTVDKVGGLDEYLL 122
>gi|336258801|ref|XP_003344208.1| hypothetical protein SMAC_08141 [Sordaria macrospora k-hell]
gi|380095106|emb|CCC07608.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 266
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 76/143 (53%), Gaps = 22/143 (15%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R V +++ GL+ I+FGN VS+ KTRR W+PNVQ+KRL+S + +R +VTT
Sbjct: 80 RRVYHQSNTGLYGSALIRFGNNVSKRNEIKTRRKWRPNVQQKRLWSKSLGVFVRTRVTTR 139
Query: 98 ALRCIDKAGGIDEYLLKTPYHKMD--TEMG-----LYWKT--------KIEKLYEELGQT 142
LR IDK GG+DEYLL HK E+G L W+ + K E LG
Sbjct: 140 VLRTIDKVGGLDEYLLG---HKAARVKELGPWGWMLRWRIMQTPAVRERFAKEREMLGLP 196
Query: 143 EVAFFTPEEEAKLEQDFKDMKLA 165
T E E LE+ ++ KLA
Sbjct: 197 A----TKEGEKSLEEQLREFKLA 215
>gi|341038382|gb|EGS23374.1| hypothetical protein CTHT_0000620 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 236
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 34 VPD----SRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRH 89
+PD R V ++ GL+ + I+FGN VSE KTRR W+PNVQ KRL+S +
Sbjct: 52 IPDYPYGPRQVYKQSNTGLYGSQRIRFGNNVSEKFEIKTRRAWRPNVQHKRLWSDSLGVF 111
Query: 90 IRVKVTTHALRCIDKAGGIDEYLL 113
+R +VTT LR IDK GG+D YLL
Sbjct: 112 VRTRVTTRVLRTIDKVGGLDNYLL 135
>gi|71006194|ref|XP_757763.1| hypothetical protein UM01616.1 [Ustilago maydis 521]
gi|46097136|gb|EAK82369.1| hypothetical protein UM01616.1 [Ustilago maydis 521]
Length = 157
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ R++RGL+ GK IQ G+ V + KT R W PN+Q K+L+S +DR +R KV+T AL
Sbjct: 49 IFKRSQRGLYDGKMIQSGHNVPKSR-QKTARTWSPNIQSKKLWSNTLDRFVRAKVSTSAL 107
Query: 100 RCIDKAGGIDEYLLKTPYHKM 120
R +DK GG+D YL KT K+
Sbjct: 108 RSMDKMGGLDIYLAKTSSEKL 128
>gi|189200168|ref|XP_001936421.1| 50S ribosomal protein L24 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983520|gb|EDU49008.1| 50S ribosomal protein L24 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 488
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 52/75 (69%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ +A +GL+ K I+FGN VS+ KTRRNWKPNV +K L+S + + I++ + H L
Sbjct: 79 LFKQANKGLYGHKRIRFGNNVSKKTETKTRRNWKPNVLQKSLYSVALKKKIKLVLAKHIL 138
Query: 100 RCIDKAGGIDEYLLK 114
+ ID+ GG+DEYLLK
Sbjct: 139 KIIDREGGLDEYLLK 153
>gi|393216308|gb|EJD01798.1| hypothetical protein FOMMEDRAFT_88136 [Fomitiporia mediterranea
MF3/22]
Length = 167
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 29 SLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDR 88
SL + + + RA+ GL GK IQFGN V +KTRR W PN+Q K L S ++DR
Sbjct: 4 SLPRLSQLASMPFKRAQTGLLHGKLIQFGNNVPFSK-HKTRRTWLPNIQRKGLRSELLDR 62
Query: 89 HIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTE---MGLYWKTKIEKLYEE 138
+ +KV+T AL+ I K GG+D+Y+LKT + + E + L + K EKL ++
Sbjct: 63 ELTLKVSTRALKTIKKMGGLDQYILKTRHELLGPEGMRIRLLLREKQEKLAQQ 115
>gi|449545782|gb|EMD36752.1| hypothetical protein CERSUDRAFT_114661 [Ceriporiopsis subvermispora
B]
Length = 126
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
RA+ GLF GK Q+GN V KTRR+W PN+Q KRLFS + ++VKV+T ALR I
Sbjct: 18 RAQLGLFHGKMKQYGNNVPFSK-RKTRRSWLPNIQSKRLFSDALQEFLKVKVSTRALRTI 76
Query: 103 DKAGGIDEYLLKT 115
K GGID+Y+LKT
Sbjct: 77 KKHGGIDQYVLKT 89
>gi|443911993|gb|ELU35786.1| ribosomal l28 family domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 117
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 39 IVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHA 98
I RA +GLF G Q+GN V KTRR W PNVQ KRLFS + H+++ VTT A
Sbjct: 14 IPFKRASQGLFEGLTKQYGNNVPHSM-KKTRRTWTPNVQTKRLFSETLGHHVKLSVTTRA 72
Query: 99 LRCIDKAGGIDEYLL 113
LR IDK GG+D YLL
Sbjct: 73 LRTIDKYGGLDGYLL 87
>gi|325191225|emb|CCA26012.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 140
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ RA+RGLFAG+ FGN VS +TRR+WK N Q K L+S +D I + VTTH L
Sbjct: 26 ISGRARRGLFAGRDKGFGNNVSHSK-RRTRRSWKVNHQWKHLYSEALDEMIGLNVTTHTL 84
Query: 100 RCIDKAGGIDEYL 112
RCIDK GG+D YL
Sbjct: 85 RCIDKIGGLDNYL 97
>gi|367036236|ref|XP_003667400.1| hypothetical protein MYCTH_2313215 [Myceliophthora thermophila ATCC
42464]
gi|347014673|gb|AEO62155.1| hypothetical protein MYCTH_2313215 [Myceliophthora thermophila ATCC
42464]
Length = 260
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R +++ GL+ I+FGN VSE K RR W+PNV +KRL+S + +R +VTT
Sbjct: 80 RPFYHQSNTGLYGSARIRFGNHVSEKFEVKARRKWRPNVHQKRLWSASLGVFVRTRVTTR 139
Query: 98 ALRCIDKAGGIDEYLL 113
LR IDK GG+DEYLL
Sbjct: 140 VLRTIDKVGGLDEYLL 155
>gi|301116497|ref|XP_002905977.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109277|gb|EEY67329.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 119
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
V RA+RGLFAG+ FGN VS +TRR WK N Q K L+S +D + + VTTH L
Sbjct: 21 VSGRAQRGLFAGRDKAFGNNVSFSK-RRTRRAWKVNHQWKSLYSEALDEKVGLNVTTHTL 79
Query: 100 RCIDKAGGIDEYLL 113
RC+DK GG+D YLL
Sbjct: 80 RCVDKIGGLDNYLL 93
>gi|348687801|gb|EGZ27615.1| hypothetical protein PHYSODRAFT_308773 [Phytophthora sojae]
Length = 133
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
V RA+RGLFAG+ FGN VS +TRR WK N Q K L+S +D + + VTTH L
Sbjct: 21 VSGRAQRGLFAGRDKAFGNNVSFSK-RRTRRAWKVNHQWKTLYSEALDEKVGLNVTTHTL 79
Query: 100 RCIDKAGGIDEYLL 113
RC+DK GG+D YLL
Sbjct: 80 RCVDKCGGLDNYLL 93
>gi|440633151|gb|ELR03070.1| hypothetical protein GMDG_05914 [Geomyces destructans 20631-21]
Length = 257
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 48/67 (71%)
Query: 47 GLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GL+ + I+FGN VSE KTRR W+PNV +KRL+S + + +R++VT LR +DK G
Sbjct: 88 GLYGMQKIRFGNMVSERNEIKTRRYWRPNVHQKRLWSVALRKFLRLRVTARVLRTVDKCG 147
Query: 107 GIDEYLL 113
G+DEYLL
Sbjct: 148 GLDEYLL 154
>gi|392590246|gb|EIW79575.1| hypothetical protein CONPUDRAFT_106160 [Coniophora puteana
RWD-64-598 SS2]
Length = 245
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 74/134 (55%), Gaps = 7/134 (5%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
RA++GLF GK GN V KTRR W PNVQ KR+ S + +RVKVTT ALRCI
Sbjct: 23 RAQQGLFHGKQKLSGNNVP-FSLKKTRRTWLPNVQHKRIPSEALG-GVRVKVTTRALRCI 80
Query: 103 DKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDM 162
+K GG+D YLL T + E G+ + + + E Q VA +E E+ KD+
Sbjct: 81 EKHGGLDNYLLNTKCELLGIE-GMRLRLLVRERAAE--QRRVAHEAKAKEVNEEE--KDL 135
Query: 163 KLAQRAARRELRRQ 176
+ AQ R E R+Q
Sbjct: 136 RAAQAVVREEKRQQ 149
>gi|242219285|ref|XP_002475424.1| mitochondrial 50S ribosomal protein L28-like protein [Postia
placenta Mad-698-R]
gi|220725395|gb|EED79384.1| mitochondrial 50S ribosomal protein L28-like protein [Postia
placenta Mad-698-R]
Length = 124
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 23 APGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLF 82
AP +KE + P R++ GLF GK Q+GN V KTRR W PN+Q KR F
Sbjct: 5 APALKEII--SAP-----FKRSQLGLFHGKMKQYGNNVPFSM-QKTRRTWLPNIQNKRFF 56
Query: 83 SYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKT 115
S + ++VKV+T AL+ I+K GGID YLLKT
Sbjct: 57 SDALQEFVQVKVSTRALKTINKYGGIDTYLLKT 89
>gi|254567473|ref|XP_002490847.1| 54S ribosomal protein L24, mitochondrial [Komagataella pastoris
GS115]
gi|238030643|emb|CAY68567.1| 54S ribosomal protein L24, mitochondrial [Komagataella pastoris
GS115]
gi|328351230|emb|CCA37630.1| 54S ribosomal protein L24, mitochondrial [Komagataella pastoris CBS
7435]
Length = 248
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 19/184 (10%)
Query: 12 LVRKVGGEKNLAPGVKESLKKCVP------------DSRIVMNRAKRGLFAGKHIQFGNR 59
+ RKV + +L G + K +P DS+I ++ +GL+ G+ +QFGN+
Sbjct: 23 VTRKVARKPDLKVGDVKPRKLAIPRTAPKFPEYKYGDSKI-YKQSNKGLYGGQFLQFGNK 81
Query: 60 VSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHK 119
+SE NK R W NV K L+S I+++ IRVK+T LR I+K GG+D+YLLK +
Sbjct: 82 ISE-FKNKNGRKWSLNVHTKSLWSEILNKSIRVKLTARVLRTINKEGGLDQYLLKDKSAR 140
Query: 120 MDTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQR-----AARRELR 174
+ WK K + L ++ Q + ++ E+ + K + Q +R L
Sbjct: 141 IKELGPTGWKLKFQLLTKKENQKKRTYYQDLEKITVNGQEKHVYFQQSGKKFLVGKRRLL 200
Query: 175 RQMY 178
+++Y
Sbjct: 201 KELY 204
>gi|358366368|dbj|GAA82989.1| 50S ribosomal protein L24 [Aspergillus kawachii IFO 4308]
Length = 212
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 4/90 (4%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGN--KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
V ++ GL+ G IQFGN++S+ G N KTRR WKPNV+ K+L+S +++ + +KVT
Sbjct: 58 VFKQSNSGLYGGAMIQFGNKISQ-GRNEGKTRRFWKPNVRRKKLYSEALEKDLFIKVTRK 116
Query: 98 ALRCIDKAGGIDEYLLKTPYHKMDTEMGLY 127
ALR I KAGG+D YLL ++ EMG++
Sbjct: 117 ALRTIRKAGGLDNYLLSDRPGRIR-EMGIF 145
>gi|134074563|emb|CAK38856.1| unnamed protein product [Aspergillus niger]
Length = 299
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 19/154 (12%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGN--KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
V ++ GL+ G IQFGN++S+ G N KTRR WKPNV+ K+L+S + + +KVT
Sbjct: 145 VFKQSNSGLYGGAMIQFGNKISQ-GRNEGKTRRFWKPNVRRKKLYSEALGEDLFIKVTRK 203
Query: 98 ALRCIDKAGGIDEYLLKTPYHKMDTEMGLY-----WKT----KIEKLYEE----LGQTEV 144
ALR I KAGG+D YLL ++ EMG++ WK KI++ + E LG E
Sbjct: 204 ALRTIRKAGGLDNYLLSDRPGRIR-EMGIFGWELRWKIMQTPKIQERFREERKKLGIPEP 262
Query: 145 AFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMY 178
F EE K ++D K+ + +E+ + Y
Sbjct: 263 PTF--EEWVKQKEDEIKAKVEEETNIKEITKPTY 294
>gi|171677089|ref|XP_001903496.1| hypothetical protein [Podospora anserina S mat+]
gi|170936612|emb|CAP61271.1| unnamed protein product [Podospora anserina S mat+]
Length = 366
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 49/76 (64%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R+ ++ GL+ I++GN VSE KTRR W+PNV KRLFS + ++ ++TT
Sbjct: 146 RLYYKQSNTGLYGHATIRYGNNVSEKNEIKTRRTWRPNVHRKRLFSLSLRTWVQTRLTTR 205
Query: 98 ALRCIDKAGGIDEYLL 113
LR IDK GG+DEYLL
Sbjct: 206 VLRTIDKVGGLDEYLL 221
>gi|317038264|ref|XP_001401958.2| mitochondrial 54S ribosomal protein YmL24/YmL14 [Aspergillus niger
CBS 513.88]
gi|350632408|gb|EHA20776.1| hypothetical protein ASPNIDRAFT_45363 [Aspergillus niger ATCC 1015]
Length = 212
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 19/154 (12%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGN--KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
V ++ GL+ G IQFGN++S+ G N KTRR WKPNV+ K+L+S + + +KVT
Sbjct: 58 VFKQSNSGLYGGAMIQFGNKISQ-GRNEGKTRRFWKPNVRRKKLYSEALGEDLFIKVTRK 116
Query: 98 ALRCIDKAGGIDEYLLKTPYHKMDTEMGLY-----WKT----KIEKLYEE----LGQTEV 144
ALR I KAGG+D YLL ++ EMG++ WK KI++ + E LG E
Sbjct: 117 ALRTIRKAGGLDNYLLSDRPGRIR-EMGIFGWELRWKIMQTPKIQERFREERKKLGIPEP 175
Query: 145 AFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMY 178
F EE K ++D K+ + +E+ + Y
Sbjct: 176 PTF--EEWVKQKEDEIKAKVEEETNIKEITKPTY 207
>gi|452847893|gb|EME49825.1| hypothetical protein DOTSEDRAFT_113714, partial [Dothistroma
septosporum NZE10]
Length = 129
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 50/70 (71%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
+ RGL+ G+ +Q GN VS+ KTRR W PNV ++LFS ++R+++V+V+ LR ID
Sbjct: 15 SNRGLYGGQRMQTGNNVSDKHEVKTRRQWHPNVFTRKLFSKALNRNVQVRVSARVLRTID 74
Query: 104 KAGGIDEYLL 113
K GG+DEYLL
Sbjct: 75 KLGGLDEYLL 84
>gi|403417784|emb|CCM04484.1| predicted protein [Fibroporia radiculosa]
Length = 125
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
R++ GLF GK Q+GN V KTRR W PN+Q KR FS M ++VKV+T AL+ I
Sbjct: 18 RSQLGLFHGKTKQYGNNVPFSK-KKTRRTWLPNIQNKRFFSDAMQNFVQVKVSTRALKTI 76
Query: 103 DKAGGIDEYLLKT 115
K GGID+Y+LKT
Sbjct: 77 KKYGGIDQYVLKT 89
>gi|326428826|gb|EGD74396.1| hypothetical protein PTSG_06407 [Salpingoeca sp. ATCC 50818]
Length = 149
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R V R++R L+ GK I FG + S+D + +R W+PNV K ++S+I+++ I+VK+TT
Sbjct: 10 RHVCGRSQRQLWGGKKIIFGVKSSDDKKSPIKR-WEPNVISKNVYSHILEKKIKVKMTTR 68
Query: 98 ALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
LRCIDKAG D Y+LK +++++G
Sbjct: 69 VLRCIDKAGSFDNYILKA--KNLESQLG 94
>gi|45198359|ref|NP_985388.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Ashbya gossypii
ATCC 10895]
gi|44984246|gb|AAS53212.1| AFL162Cp [Ashbya gossypii ATCC 10895]
gi|374108616|gb|AEY97522.1| FAFL162Cp [Ashbya gossypii FDAG1]
Length = 261
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 8/104 (7%)
Query: 15 KVGGEKNLAPGVKESLKKCVPDSRI----VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRR 70
KVG EK P S +K VPD + + ++ GL+ G IQFGN +SE KTRR
Sbjct: 42 KVGDEK---PRYIPSKRKTVPDYKYGESRIFKQSNNGLYGGSFIQFGNNISESK-TKTRR 97
Query: 71 NWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
W PN+ K L+S + + +R+K+T LR I K GG+D YL K
Sbjct: 98 TWLPNIVRKSLWSEALQKDVRIKLTAKVLRTISKEGGLDNYLTK 141
>gi|219118234|ref|XP_002179896.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408949|gb|EEC48882.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 89
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R NR++RGL+ GK ++ GN VS T+R +KPNV KR++S I+D ++ +TT
Sbjct: 9 RFRSNRSRRGLYDGKDVRTGNNVSF-SMRATKRTFKPNVMIKRVYSEILDEMVKFHLTTS 67
Query: 98 ALRCIDKAGGIDEYLLKTPY 117
LR IDKAGG+D YLLK Y
Sbjct: 68 TLRSIDKAGGLDNYLLKNEY 87
>gi|393236100|gb|EJD43651.1| hypothetical protein AURDEDRAFT_17748, partial [Auricularia
delicata TFB-10046 SS5]
Length = 95
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 55 QFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
Q+GN V +KTRR W PN+Q KRL+S +D+ I++ +TT ALRCIDK GG+DEY++K
Sbjct: 11 QYGNNVPHSK-HKTRRTWLPNIQTKRLYSLTLDQWIKLSLTTRALRCIDKVGGLDEYIMK 69
Query: 115 T 115
T
Sbjct: 70 T 70
>gi|353236382|emb|CCA68378.1| hypothetical protein PIIN_11773 [Piriformospora indica DSM 11827]
Length = 166
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
V RA+ G+F G+ I+FGN V+E G +T R W PN++ KRL S I++R +R+ VTT AL
Sbjct: 23 VFKRAQTGIFHGRAIRFGNNVAESG-KRTTRTWLPNIRLKRLKSDILNRTMRMNVTTRAL 81
Query: 100 RCIDKAGGIDEYLLKT 115
+ I K G +D+YLLK
Sbjct: 82 KTIKKYGSLDDYLLKV 97
>gi|413954009|gb|AFW86658.1| hypothetical protein ZEAMMB73_420910 [Zea mays]
gi|414887006|tpg|DAA63020.1| TPA: hypothetical protein ZEAMMB73_200944 [Zea mays]
Length = 91
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Query: 120 MDTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYG 179
MDTEMG+ WK KIEK+Y +LG+ EV FF PEEEAK+++ F +++ A++ RRE +R +
Sbjct: 1 MDTEMGIVWKAKIEKMYSDLGEMEVGFFPPEEEAKVKEGFDEVRAAKKDFRREAKRAL-- 58
Query: 180 GSSKQKQIEQGSADTQETAE 199
+KQ+Q+E SA + E
Sbjct: 59 --AKQRQLEASSAGDDQAGE 76
>gi|452003486|gb|EMD95943.1| hypothetical protein COCHEDRAFT_1152036 [Cochliobolus
heterostrophus C5]
Length = 494
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ +A +GL+ + I+FGN VS++ KTRR W+PNV K L+S + + I++++T L
Sbjct: 75 LFKQANKGLYGEQMIRFGNNVSKETETKTRRKWQPNVLSKSLYSVALKKRIKLRITAKVL 134
Query: 100 RCIDKAGGIDEYLLK 114
+ +D+ GG+DEYLLK
Sbjct: 135 KTMDREGGLDEYLLK 149
>gi|320594142|gb|EFX06545.1| 50S ribosomal protein l24 [Grosmannia clavigera kw1407]
Length = 268
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 16/200 (8%)
Query: 3 FRGKEMMKKLVRKVGGEKNLAPGVKESLKKCVP---DSRIVMNRAKRGLFAGKHIQFGNR 59
FR + K VR G+ + P + P R + ++ GL+ I+FGN
Sbjct: 48 FRQQTRGYKQVRLPAGQPPI-PSATAQQPEIPPYPLGPRQLYKQSNTGLYGTARIRFGNT 106
Query: 60 VSED----GGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKT 115
VS K RR W+PN+QEKRL+S + IR +++T LR +DK GG+DEYLL +
Sbjct: 107 VSRQTEIINPQKNRRKWRPNIQEKRLWSASLSAPIRTRISTRVLRTVDKVGGLDEYLLGS 166
Query: 116 PYHKMDTEMG-----LYWK-TKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQ-RA 168
++ E+G L W+ + + E + +A P + ++ F D + A A
Sbjct: 167 KPARI-AELGPWGWRLRWRIIQTPAVQERFRRDRIALGLPADGLPADEFFDDTEDASLTA 225
Query: 169 ARRELRRQMYGGSSKQKQIE 188
A E G Q+ I+
Sbjct: 226 AENEAPVDGTAGQETQRMID 245
>gi|451856030|gb|EMD69321.1| hypothetical protein COCSADRAFT_32064 [Cochliobolus sativus ND90Pr]
Length = 496
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ +A +GL+ + I+FGN VS++ KTRR W+PNV K L+S + + I++++T L
Sbjct: 77 LFKQANKGLYGEQMIRFGNNVSKETETKTRRKWQPNVLSKSLYSVALKKRIKLRITAKVL 136
Query: 100 RCIDKAGGIDEYLLK 114
+ +D+ GG+DEYLLK
Sbjct: 137 KTMDREGGLDEYLLK 151
>gi|367001390|ref|XP_003685430.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Tetrapisispora
phaffii CBS 4417]
gi|357523728|emb|CCE62996.1| hypothetical protein TPHA_0D03610 [Tetrapisispora phaffii CBS 4417]
Length = 258
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Query: 15 KVGGEKNLAPGVKESLKKCVPDSRI----VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRR 70
++GGEK L K +K PD + + ++ +GLF G IQFGN +SE KTRR
Sbjct: 39 QIGGEKPLYIPKK---RKVFPDYKYGESNLFKQSNQGLFGGSFIQFGNNISE-SKIKTRR 94
Query: 71 NWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
W PN+ +K L+S +++ I +K+T L+ I K GGID YLLK
Sbjct: 95 TWLPNIIKKSLWSETLNKPITLKLTAKVLKTITKEGGIDNYLLK 138
>gi|391330155|ref|XP_003739529.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like
[Metaseiulus occidentalis]
Length = 236
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 16/136 (11%)
Query: 34 VPDSRI---VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHI 90
VPD+RI + ++RGL+ G+ G R+ + G W P V + L+S I+D+H
Sbjct: 54 VPDARIPTIFLPESQRGLWGGEEAVKGFRLRKKGRGTVPTLWVPYVTKNVLYSEILDKHF 113
Query: 91 RVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKI------EKLY-------E 137
+++ T HALR ID++ G D Y+LKTP ++++M L + K+ ++Y +
Sbjct: 114 QIETTDHALRLIDESFGFDNYILKTPVQDLNSQMALDIRRKMLLAMARREIYPDNPERRK 173
Query: 138 ELGQTEVAFFTPEEEA 153
E+ + F PEEEA
Sbjct: 174 EILEKYAEFIIPEEEA 189
>gi|326473945|gb|EGD97954.1| 50S ribosomal protein L24 [Trichophyton tonsurans CBS 112818]
Length = 234
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 65/105 (61%), Gaps = 5/105 (4%)
Query: 30 LKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRLFSYIMD 87
+ C R +A GL+ G I FGN++S+ G NK TRR WKPNV++++++S +D
Sbjct: 50 IPPCPYGPRRTFKQADSGLYGGATIIFGNKISK-GRNKGKTRRIWKPNVRKEKVYSKALD 108
Query: 88 RHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLY-WKTK 131
I +KVT LR I+K GG+DEYLL ++ E+G++ WK +
Sbjct: 109 EEIELKVTHGVLRTINKVGGLDEYLLGDKPARIK-ELGMFGWKLR 152
>gi|67523027|ref|XP_659574.1| hypothetical protein AN1970.2 [Aspergillus nidulans FGSC A4]
gi|40745979|gb|EAA65135.1| hypothetical protein AN1970.2 [Aspergillus nidulans FGSC A4]
gi|259487329|tpe|CBF85918.1| TPA: 50S ribosomal protein L24 (AFU_orthologue; AFUA_4G10740)
[Aspergillus nidulans FGSC A4]
Length = 203
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 69/113 (61%), Gaps = 5/113 (4%)
Query: 24 PGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGN--KTRRNWKPNVQEKRL 81
P V + + + ++ GL+ G IQFGN++S+ G N KTRR WKPNV+ K+L
Sbjct: 33 PKVPDYIPPYPYGPNYMFRQSNTGLYGGATIQFGNKISQ-GRNEGKTRRFWKPNVRRKKL 91
Query: 82 FSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLY-WKTKIE 133
+S + + + +KVT ALR I KAGG+D+YLL ++ E+G++ WK + +
Sbjct: 92 WSEALQQFLFIKVTRKALRTIRKAGGLDQYLLDDRPARIK-ELGVFGWKLRWQ 143
>gi|402084423|gb|EJT79441.1| 54S ribosomal protein L24 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 281
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 48/76 (63%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R + ++ GL+ I FG+ VS+ KT R W+PNVQ +RL+S + +R K+TT
Sbjct: 92 RRIYKQSNTGLYGSAAIAFGHNVSKKHAVKTPRKWRPNVQSRRLWSEALGMMVRTKITTR 151
Query: 98 ALRCIDKAGGIDEYLL 113
LR +DK GG+DEYLL
Sbjct: 152 VLRTLDKVGGLDEYLL 167
>gi|303311457|ref|XP_003065740.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Coccidioides
posadasii C735 delta SOWgp]
gi|240105402|gb|EER23595.1| ribosomal L28 family protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320039613|gb|EFW21547.1| 50S ribosomal protein L24 [Coccidioides posadasii str. Silveira]
Length = 224
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 38/216 (17%)
Query: 16 VGGEKNLAPGVKESLKKCVPD--------SRIVMNRAKRGLFAGKHIQFGNRVSEDGGN- 66
+ +N + + + +PD R +A GL+ G IQFGN++S+ G N
Sbjct: 24 LASRRNFSTTLPSQRTRTLPDYIPPYPYGPRYTFKQADSGLYGGATIQFGNKISK-GRNE 82
Query: 67 -KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
KTRR WKPN+++++L+S +++ + +KV LR I K GG+D+YLL ++ E+G
Sbjct: 83 GKTRRIWKPNIRKEKLYSEALEKWLDLKVQHRVLRTIKKEGGLDQYLLSDKPSRIK-ELG 141
Query: 126 LY-----WKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRE-LRRQMYG 179
++ WK K + + E++ K++ L + A +E L R
Sbjct: 142 IFGWGLRWKVMTSKAMRK---------------RFEEERKELGLEKPATFKEYLARH--- 183
Query: 180 GSSKQKQIEQGSADTQETAEEAAKILSEGIPNEYAP 215
+ ++Q++ + D ++ E ++ P+E AP
Sbjct: 184 --TMEQQVQAAAEDAEQPPAEIKVTVAADTPSETAP 217
>gi|410075417|ref|XP_003955291.1| hypothetical protein KAFR_0A07220 [Kazachstania africana CBS 2517]
gi|372461873|emb|CCF56156.1| hypothetical protein KAFR_0A07220 [Kazachstania africana CBS 2517]
Length = 185
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
V ++K+GL+ G IQFG+ +SE NK +R W PN+ K L+S ++R IR+K+T L
Sbjct: 64 VFKQSKKGLYGGSFIQFGHSISESK-NKVKRRWLPNIVRKELWSEALNRRIRIKLTAKVL 122
Query: 100 RCIDKAGGIDEYLLK 114
R I K GGID YL+K
Sbjct: 123 RTISKEGGIDNYLIK 137
>gi|119194203|ref|XP_001247705.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Coccidioides
immitis RS]
gi|392863052|gb|EAS36245.2| 50S ribosomal protein L24 [Coccidioides immitis RS]
Length = 224
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 38/216 (17%)
Query: 16 VGGEKNLAPGVKESLKKCVPD--------SRIVMNRAKRGLFAGKHIQFGNRVSEDGGN- 66
+ +N + + + +PD R +A GL+ G IQFGN++S+ G N
Sbjct: 24 LASRRNFSTTLPSQRTRTLPDYIPPYPYGPRYTFKQADSGLYGGATIQFGNKISK-GRNE 82
Query: 67 -KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
KTRR WKPN+++++L+S +++ + +KV LR I K GG+D+YLL ++ E+G
Sbjct: 83 GKTRRIWKPNIRKEKLYSEALEKWLDLKVQHRVLRTIKKEGGLDQYLLSDKPSRIK-ELG 141
Query: 126 LY-----WKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRE-LRRQMYG 179
++ WK K + + E++ K++ L + A +E L R
Sbjct: 142 VFGWGLRWKVMTSKAMRK---------------RFEEERKELGLEKPATFKEYLARH--- 183
Query: 180 GSSKQKQIEQGSADTQETAEEAAKILSEGIPNEYAP 215
+ ++Q++ + D ++ E ++ P+E AP
Sbjct: 184 --TMEQQVQAAAEDAEQPPAEIKVTVAADTPSETAP 217
>gi|409047793|gb|EKM57272.1| hypothetical protein PHACADRAFT_93058 [Phanerochaete carnosa
HHB-10118-sp]
Length = 133
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
RA+ GLF GK Q GN V KTRR W PNV +RLFS + +IRVKVT AL+ I
Sbjct: 17 RAQLGLFGGKTRQSGNNVPFSK-KKTRRTWLPNVHNQRLFSETLQDYIRVKVTARALKTI 75
Query: 103 DKAGGIDEYLLKT 115
K GGID+Y++KT
Sbjct: 76 KKHGGIDKYVMKT 88
>gi|302658408|ref|XP_003020908.1| hypothetical protein TRV_04984 [Trichophyton verrucosum HKI 0517]
gi|291184778|gb|EFE40290.1| hypothetical protein TRV_04984 [Trichophyton verrucosum HKI 0517]
Length = 339
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRLFSYIMDRHIRVKVT 95
R +A GL+ G I FGN++S+ G NK TRR WKPNV++++++S +D I +KVT
Sbjct: 165 RRTFKQADSGLYGGATIIFGNKISK-GRNKGKTRRIWKPNVRKEKIYSKALDEEIELKVT 223
Query: 96 THALRCIDKAGGIDEYLLKTPYHKMDTEMGLY-WKTK 131
LR I+K GG+DEYLL ++ E+G++ WK +
Sbjct: 224 HGVLRTINKVGGLDEYLLGDKPARIK-ELGMFGWKLR 259
>gi|345565006|gb|EGX47962.1| hypothetical protein AOL_s00081g289 [Arthrobotrys oligospora ATCC
24927]
Length = 325
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 47 GLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GL+A KH+QFGN + TRR W PN++ K+L+S+ + + K+ T LR IDK G
Sbjct: 71 GLYASKHVQFGNNIPNKKYTITRRRWYPNIKHKKLWSFGLGEWVTCKLATSVLRTIDKVG 130
Query: 107 GIDEYLL 113
G+D YLL
Sbjct: 131 GLDNYLL 137
>gi|302498845|ref|XP_003011419.1| hypothetical protein ARB_02269 [Arthroderma benhamiae CBS 112371]
gi|291174970|gb|EFE30779.1| hypothetical protein ARB_02269 [Arthroderma benhamiae CBS 112371]
Length = 280
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRLFSYIMDRHIRVKVT 95
R +A GL+ G I FGN++S+ G NK TRR WKPNV++++++S +D I +KVT
Sbjct: 106 RRTFKQADSGLYGGATIIFGNKISK-GRNKGKTRRIWKPNVRKEKIYSKALDEEIELKVT 164
Query: 96 THALRCIDKAGGIDEYLLKTPYHKMDTEMGLY-WKTK 131
LR I+K GG+DEYLL ++ E+G++ WK +
Sbjct: 165 HGVLRTINKVGGLDEYLLGDKPARIK-ELGMFGWKLR 200
>gi|169771529|ref|XP_001820234.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Aspergillus oryzae
RIB40]
gi|238485896|ref|XP_002374186.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Aspergillus flavus
NRRL3357]
gi|83768093|dbj|BAE58232.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220699065|gb|EED55404.1| 50S ribosomal protein L24 [Aspergillus flavus NRRL3357]
gi|391871682|gb|EIT80839.1| ribosomal protein [Aspergillus oryzae 3.042]
Length = 212
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGN--KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
V ++ GL+ G IQFGN++S+ G N KTRR WKPNV+ K+++S +D + +KVT
Sbjct: 58 VYKQSNSGLYGGVMIQFGNKISK-GRNEGKTRRFWKPNVRRKKIYSEALDEWLFIKVTRK 116
Query: 98 ALRCIDKAGGIDEYLL 113
ALR I K+GG+D YLL
Sbjct: 117 ALRTIRKSGGLDNYLL 132
>gi|327295266|ref|XP_003232328.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Trichophyton
rubrum CBS 118892]
gi|326465500|gb|EGD90953.1| 50S ribosomal protein L24 [Trichophyton rubrum CBS 118892]
Length = 232
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRLFSYIMDRHIRVKVT 95
R +A GL+ G I FGN++S+ G NK TRR WKPNV++++++S +D I +KVT
Sbjct: 58 RRTFKQADSGLYGGATIIFGNKISK-GRNKGKTRRIWKPNVRKEKIYSKALDEEIELKVT 116
Query: 96 THALRCIDKAGGIDEYLLKTPYHKMDTEMGLY-WKTK 131
LR I+K GG+DEYLL ++ E+G++ WK +
Sbjct: 117 HGVLRTINKVGGLDEYLLGDKPARIK-ELGMFGWKLR 152
>gi|119500374|ref|XP_001266944.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Neosartorya
fischeri NRRL 181]
gi|119415109|gb|EAW25047.1| 50S ribosomal protein L24 [Neosartorya fischeri NRRL 181]
Length = 212
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGN--KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
+ ++ GL+ G IQFGN++S+ G N KTRR WKPNV+ K+L+S + ++ +KVT
Sbjct: 58 IFKQSNSGLYGGAMIQFGNKISK-GRNEGKTRRFWKPNVRRKKLWSEALGEYLYIKVTRK 116
Query: 98 ALRCIDKAGGIDEYLL 113
ALR I K+GG+D YLL
Sbjct: 117 ALRTIWKSGGLDNYLL 132
>gi|340372735|ref|XP_003384899.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like
[Amphimedon queenslandica]
Length = 140
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 37 SRIVMNRAK---RGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
+R++ R K GL+AG I G +V+ KT++ W PNVQ +S I+ ++
Sbjct: 5 TRLLCQRPKGADFGLYAGVDIMRGIKVTF-SNKKTKKVWYPNVQRHTYYSSILGVKFDLR 63
Query: 94 VTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEELGQT 142
VTT A+RCIDKAGG D Y+ TP K+ +++G Y KT+++ + G T
Sbjct: 64 VTTQAMRCIDKAGGFDNYIYHTPSQKLKSKLGDYLKTEMKNEVKRRGLT 112
>gi|170097237|ref|XP_001879838.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645241|gb|EDR09489.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 192
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
R++ GLF GK+ Q+GN V +K+RR W PNVQ+KR+ S + IRVK+TT AL+ I
Sbjct: 20 RSQFGLFQGKNKQYGNNVP-FSKHKSRRTWLPNVQQKRIPSATLGMPIRVKLTTRALKTI 78
Query: 103 DKAGGIDEYLLKTP 116
K GG+D+Y+ KTP
Sbjct: 79 KKHGGLDKYVEKTP 92
>gi|315043030|ref|XP_003170891.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Arthroderma
gypseum CBS 118893]
gi|311344680|gb|EFR03883.1| 54S ribosomal protein L24 [Arthroderma gypseum CBS 118893]
Length = 232
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRLFSYIMDRHIRVKVT 95
R +A GL+ G I FGN++S+ G NK TRR WKPNV++++++S +D I +KVT
Sbjct: 58 RRTFKQADSGLYGGATIIFGNKISK-GRNKGKTRRIWKPNVRKEKVYSKALDEEIELKVT 116
Query: 96 THALRCIDKAGGIDEYLLKTPYHKMDTEMGLY-WKTK 131
LR I+K GG+DEYLL ++ E+G++ WK +
Sbjct: 117 HGVLRTINKVGGLDEYLLGDKPARIK-ELGMFGWKLR 152
>gi|326480944|gb|EGE04954.1| 54S ribosomal protein L24 [Trichophyton equinum CBS 127.97]
Length = 232
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRLFSYIMDRHIRVKVT 95
R +A GL+ G I FGN++S+ G NK TRR WKPNV++++++S +D I +KVT
Sbjct: 58 RRTFKQADSGLYGGATIIFGNKISK-GRNKGKTRRIWKPNVRKEKVYSKALDEEIELKVT 116
Query: 96 THALRCIDKAGGIDEYLLKTPYHKMDTEMGLY-WKTK 131
LR I+K GG+DEYLL ++ E+G++ WK +
Sbjct: 117 HGVLRTINKVGGLDEYLLGDKPARIK-ELGMFGWKLR 152
>gi|296417908|ref|XP_002838589.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634539|emb|CAZ82780.1| unnamed protein product [Tuber melanosporum]
Length = 249
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 GLFAGKHIQFGNRVSEDGGN-KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKA 105
GL+ GKHIQFGN V E+ KTRR W PNV+ + ++S + H + +TT LR IDK
Sbjct: 58 GLYGGKHIQFGNNVPENFLRYKTRRQWMPNVRHRSVYSRALGMHFSLDITTSVLRTIDKV 117
Query: 106 GGIDEYLLKT 115
GG+D YL T
Sbjct: 118 GGLDAYLTGT 127
>gi|115391337|ref|XP_001213173.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Aspergillus
terreus NIH2624]
gi|114194097|gb|EAU35797.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 212
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGN--KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
V ++ GL+ G IQFGN++S+ G N KTRR WKPNV+ K+L+S + + +KVT
Sbjct: 58 VYKQSNTGLYGGVMIQFGNKISK-GRNEGKTRRMWKPNVRRKKLYSEALGEDLYIKVTRK 116
Query: 98 ALRCIDKAGGIDEYLL 113
ALR I KAGG+D YLL
Sbjct: 117 ALRTIRKAGGLDNYLL 132
>gi|70993812|ref|XP_751753.1| 50S ribosomal protein L24 [Aspergillus fumigatus Af293]
gi|66849387|gb|EAL89715.1| 50S ribosomal protein L24 [Aspergillus fumigatus Af293]
gi|159125327|gb|EDP50444.1| 50S ribosomal protein L24 [Aspergillus fumigatus A1163]
Length = 212
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGN--KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
+ ++ GL+ G IQFGN++S+ G N KTRR WKPNV+ K+L+S + ++ +KVT
Sbjct: 58 IFKQSNSGLYGGAMIQFGNKISK-GRNEGKTRRFWKPNVRRKKLWSEALGEYLFIKVTRK 116
Query: 98 ALRCIDKAGGIDEYLL 113
ALR I K+GG+D YLL
Sbjct: 117 ALRTIWKSGGLDNYLL 132
>gi|50292515|ref|XP_448690.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Candida glabrata
CBS 138]
gi|49528002|emb|CAG61653.1| unnamed protein product [Candida glabrata]
Length = 267
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 8/104 (7%)
Query: 15 KVGGEKNLAPGVKESLKKCVPDSR----IVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRR 70
KVG ++ P +K PD + +V ++ +GL+ G +++GN++SE +KTRR
Sbjct: 48 KVG---DVRPNYVPKERKEFPDYKYGEALVFKQSNKGLYGGSFVKYGNKISE-SKHKTRR 103
Query: 71 NWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
W PNV +K L+S ++R I +K+T LR I K GGID YL+K
Sbjct: 104 TWHPNVIKKSLWSETLNRSINIKMTAKVLRTIIKEGGIDNYLIK 147
>gi|121707801|ref|XP_001271945.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Aspergillus
clavatus NRRL 1]
gi|119400093|gb|EAW10519.1| 50S ribosomal protein L24 [Aspergillus clavatus NRRL 1]
Length = 212
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGN--KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
+ ++ GL+ G IQFGN++S+ G N KTRR+WKPNV+ K+L+S + + +KVT
Sbjct: 58 IFKQSNTGLYGGAMIQFGNKISK-GRNEGKTRRSWKPNVRRKKLWSEALGEFLFIKVTRK 116
Query: 98 ALRCIDKAGGIDEYLL 113
ALR I K+GG+D YLL
Sbjct: 117 ALRTIWKSGGLDNYLL 132
>gi|225682598|gb|EEH20882.1| 50S ribosomal protein L24 [Paracoccidioides brasiliensis Pb03]
gi|226290013|gb|EEH45497.1| 50S ribosomal protein L24 [Paracoccidioides brasiliensis Pb18]
Length = 203
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 5/96 (5%)
Query: 39 IVMNRAKRGLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRLFSYIMDRHIRVKVTT 96
+ +A GL+ G IQFGN++S+ G NK TRR WKPNV+ + L+S + +++KVT
Sbjct: 61 LYFKQANSGLYGGSTIQFGNKISK-GRNKGKTRRTWKPNVRHEELYSEALGTTLKLKVTH 119
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMGLY-WKTK 131
LR I K GG+D+YLL ++ E+G++ WK +
Sbjct: 120 RVLRTIKKVGGLDQYLLGDKPARIK-ELGVFGWKLR 154
>gi|343428303|emb|CBQ71833.1| related to MRPL24-mitochondrial ribosomal protein, large subunit
[Sporisorium reilianum SRZ2]
Length = 160
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ R++RGL+ GK IQ G+ V + KT R W PN+Q K+L+S +++ +R KV+T AL
Sbjct: 49 IFKRSQRGLYDGKIIQSGHNVPKSR-QKTARTWAPNIQSKKLWSDTLEQFVRAKVSTSAL 107
Query: 100 RCIDKAGGIDEYLLKTPYHKM 120
R +DK GG+D YL T K+
Sbjct: 108 RTMDKLGGLDRYLANTRGEKL 128
>gi|444313791|ref|XP_004177553.1| hypothetical protein TBLA_0A02350 [Tetrapisispora blattae CBS 6284]
gi|387510592|emb|CCH58034.1| hypothetical protein TBLA_0A02350 [Tetrapisispora blattae CBS 6284]
Length = 242
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 85/148 (57%), Gaps = 15/148 (10%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ ++ +GL+ G IQFG+ V+E+G KT + W PN+ +KRL+S + R + VK+TT L
Sbjct: 52 IFQQSNKGLYGGSFIQFGHHVAENG-IKTPKTWLPNIIKKRLWSETLGRDVEVKLTTKVL 110
Query: 100 RCIDKAGGIDEYLLKTPYHKMDTEMGLY-WKTK---IEKLYEELGQTEVAFFTPEEEAKL 155
+ I K GG+D+YLLK ++ E+G + WK + ++K+ +E +T P E L
Sbjct: 111 KTISKEGGLDKYLLKDKSARI-KELGPFGWKLRYDVLKKMEDEKRKTT----DPHEGKSL 165
Query: 156 EQD-----FKDMKLAQRAARRELRRQMY 178
++ ++D K RR+L + +Y
Sbjct: 166 TENGDRVYYEDEKYRVIVGRRKLMKLLY 193
>gi|296808247|ref|XP_002844462.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Arthroderma otae
CBS 113480]
gi|238843945|gb|EEQ33607.1| 54S ribosomal protein L24 [Arthroderma otae CBS 113480]
Length = 232
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRLFSYIMDRHIRVKVT 95
R +A GL+ G I FGN++S+ G NK TRR WKPNV++++++S +D + +KVT
Sbjct: 58 RRTFKQADSGLYGGATIIFGNKISK-GRNKGKTRRIWKPNVRKEKVYSKALDEELDLKVT 116
Query: 96 THALRCIDKAGGIDEYLLKTPYHKMDTEMGLY-WKTK 131
LR I+K GG+DEYLL ++ E+G++ WK +
Sbjct: 117 HRVLRTINKVGGLDEYLLGDKPARIK-ELGMFGWKLR 152
>gi|409082771|gb|EKM83129.1| hypothetical protein AGABI1DRAFT_69323 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200636|gb|EKV50560.1| hypothetical protein AGABI2DRAFT_217309 [Agaricus bisporus var.
bisporus H97]
Length = 165
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
R++ GLF GK Q+GN V +KTRR W PNVQ KR+ S + ++KVTT ALR I
Sbjct: 18 RSQSGLFHGKTKQYGNNVPFSK-HKTRRTWLPNVQRKRISSETLGTTFKLKVTTRALRTI 76
Query: 103 DKAGGIDEYLLKT 115
DK GG+D+YL +T
Sbjct: 77 DKYGGLDKYLQRT 89
>gi|392559983|gb|EIW53166.1| hypothetical protein TRAVEDRAFT_173806 [Trametes versicolor
FP-101664 SS1]
Length = 119
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
R++ GLF GK Q+GN V + +KTRR+W PNV +RLFS + R I++KV AL+ I
Sbjct: 17 RSQLGLFQGKMKQYGNSV-PNSKHKTRRSWLPNVHNQRLFSDTLGRFIKIKVAARALKTI 75
Query: 103 DKAGGIDEYLLKT 115
K G ID+YLL T
Sbjct: 76 KKHGNIDKYLLAT 88
>gi|295669208|ref|XP_002795152.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226285086|gb|EEH40652.1| 50S ribosomal protein L24 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 199
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 5/96 (5%)
Query: 39 IVMNRAKRGLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRLFSYIMDRHIRVKVTT 96
+ +A GL+ G IQFGN++S+ G NK TRR WKPNV+ + L+S + +++KVT
Sbjct: 61 LYFKQANSGLYGGSTIQFGNKISK-GRNKGKTRRTWKPNVRHEELYSEALGTTLKLKVTH 119
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMGLY-WKTK 131
LR I K GG+D+YLL ++ E+G++ WK +
Sbjct: 120 RVLRTIKKVGGLDQYLLGDKPARIK-ELGVFGWKLR 154
>gi|320584009|gb|EFW98221.1| 54S ribosomal protein L24, mitochondrial [Ogataea parapolymorpha
DL-1]
Length = 260
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ R+ RGLF G+ I FGN+VSE N+ RR W PNV K+L+S +++ + +K+T L
Sbjct: 69 IFKRSNRGLFGGQFIVFGNKVSEHK-NRARRTWLPNVVNKKLWSESLNKMVPLKLTARVL 127
Query: 100 RCIDKAGGIDEYLLKTPYHKMDTEMGLY-WKTKIEKL 135
R I K GG+D YL K ++ E+G + W+ + + L
Sbjct: 128 RTITKEGGLDNYLTKDKRARIK-ELGPFGWRLRYDVL 163
>gi|365990107|ref|XP_003671883.1| hypothetical protein NDAI_0I00710 [Naumovozyma dairenensis CBS 421]
gi|343770657|emb|CCD26640.1| hypothetical protein NDAI_0I00710 [Naumovozyma dairenensis CBS 421]
Length = 286
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 7/92 (7%)
Query: 27 KESLKKCVPDSRI----VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLF 82
KE LK PD + + ++ +GL+ G +Q+GN +SE KTRR W PN+ +K L+
Sbjct: 55 KERLK--FPDYKYGESNIFKQSNKGLYGGSFVQYGNSISESK-QKTRRRWLPNIVKKGLW 111
Query: 83 SYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
S + R+I +K+TT L+ I K GGID YL+K
Sbjct: 112 SETLGRNISIKLTTKVLKTISKEGGIDNYLIK 143
>gi|389745882|gb|EIM87062.1| hypothetical protein STEHIDRAFT_96053 [Stereum hirsutum FP-91666
SS1]
Length = 226
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 21 NLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKR 80
LA + +++ P R++ GLF GK +GN V KTRR W PN+Q K
Sbjct: 7 TLASSLSRAIQLTTPAHSAPFKRSQNGLFHGKMKIYGNSVPF-SKKKTRRFWLPNLQNKT 65
Query: 81 LFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTP 116
S +D+ + VKV+T AL+ I K GGID YLL+TP
Sbjct: 66 FRSEALDKDVEVKVSTKALKTIRKYGGIDPYLLQTP 101
>gi|401840302|gb|EJT43175.1| MRPL24-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 258
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 31 KKCVPDSRI----VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIM 86
+K PD + + ++ +GL+ G IQFGN +SE KTR+ W PNV +K L+S +
Sbjct: 52 RKKFPDYKYGESGIFKQSNKGLYGGSFIQFGNNISESKA-KTRKKWLPNVVKKGLWSETL 110
Query: 87 DRHIRVKVTTHALRCIDKAGGIDEYLLK 114
+R I +K+T LR I K GGID YL K
Sbjct: 111 NRKISIKMTAKVLRTISKEGGIDNYLTK 138
>gi|365758940|gb|EHN00760.1| Mrpl24p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 258
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 31 KKCVPDSRI----VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIM 86
+K PD + + ++ +GL+ G IQFGN +SE KTR+ W PNV +K L+S +
Sbjct: 52 RKKFPDYKYGESGIFKQSNKGLYGGSFIQFGNNISESKA-KTRKKWLPNVVKKGLWSETL 110
Query: 87 DRHIRVKVTTHALRCIDKAGGIDEYLLK 114
+R I +K+T LR I K GGID YL K
Sbjct: 111 NRKISIKMTAKVLRTISKEGGIDNYLTK 138
>gi|224009912|ref|XP_002293914.1| RM24, ribosomal protein 24 mitochondrial large ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
gi|220970586|gb|EED88923.1| RM24, ribosomal protein 24 mitochondrial large ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
Length = 70
Score = 73.6 bits (179), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
R+ RGL+ GK ++FGN V KTRR W PNVQ KR++S I+ I +TT ALR I
Sbjct: 1 RSLRGLYDGKDVRFGNNVPFSL-KKTRRRWNPNVQLKRVYSEILGEMIPFHITTSALRSI 59
Query: 103 DKAGGIDEYLL 113
DK GG+D YLL
Sbjct: 60 DKMGGLDNYLL 70
>gi|366993198|ref|XP_003676364.1| hypothetical protein NCAS_0D04220 [Naumovozyma castellii CBS 4309]
gi|342302230|emb|CCC70003.1| hypothetical protein NCAS_0D04220 [Naumovozyma castellii CBS 4309]
Length = 273
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 10/158 (6%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ ++ +GL+ G IQ GN +SE KTRR W PN+ K+L+S ++ I VK+TT L
Sbjct: 68 IFKQSNKGLYGGSFIQHGNNISE-SKQKTRRTWLPNIVRKKLWSETLNDKIDVKMTTKVL 126
Query: 100 RCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEE------LGQTEVAFFTPE-EE 152
+ I K GGID YLLK ++ WK + L ++ L + TP E+
Sbjct: 127 KTISKEGGIDNYLLKDKSARIKELGPTGWKLRYTVLKKKDSIENPLHKNAKLVTTPTGEQ 186
Query: 153 AKL--EQDFKDMKLAQRAARRELRRQMYGGSSKQKQIE 188
AK+ ++ KL A +R+L + ++ +++IE
Sbjct: 187 AKIYYRENVNGNKLLITAGKRKLLKLLFPLERMEQRIE 224
>gi|303283017|ref|XP_003060800.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458271|gb|EEH55569.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 208
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 40/54 (74%)
Query: 67 KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
+TRR WKPN Q KRL+S +D +RV VTT+ALR IDKAGG+D YLL T K+
Sbjct: 101 RTRRRWKPNAQRKRLYSEALDELVRVNVTTYALRWIDKAGGLDAYLLNTTPQKL 154
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNK 67
RIV R K LF GK++ GN +SEDGGNK
Sbjct: 11 RIVAKRVKNNLFGGKNVNTGNMISEDGGNK 40
>gi|320167558|gb|EFW44457.1| hypothetical protein CAOG_02482 [Capsaspora owczarzaki ATCC 30864]
Length = 640
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 32 KCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIR 91
V R + RA RGL+ G I +GN++S KTRR W PNV + + ++D+H+R
Sbjct: 5 SAVASFRNLAKRADRGLYHGVRIGYGNQISH-SHRKTRRRWLPNVHLRTPYLSLLDKHVR 63
Query: 92 VKVTTHALRCIDKAGGIDEYLL 113
+ T+ A R ID AGGI+ YLL
Sbjct: 64 LNTTSKATRTIDLAGGIERYLL 85
>gi|388852882|emb|CCF53567.1| related to MRPL24-mitochondrial ribosomal protein, large subunit
[Ustilago hordei]
Length = 159
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Query: 39 IVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHA 98
+ R++RGL+ G+ IQ G+ V + KT R W+PN+Q KRL+S + ++ +V+T A
Sbjct: 48 TIFKRSQRGLYDGRMIQSGHNV-PNSRQKTARTWQPNIQRKRLWSETLKTFVKARVSTSA 106
Query: 99 LRCIDKAGGIDEYLLKTPYHKM 120
LR +DK GG+D+YL T K+
Sbjct: 107 LRTMDKLGGLDKYLANTRGEKL 128
>gi|207342192|gb|EDZ70031.1| YMR193Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 175
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 10/111 (9%)
Query: 13 VRKVGGEKNLAPGVKESL-----KKCVPDSRI----VMNRAKRGLFAGKHIQFGNRVSED 63
RK+ + N G + L +K PD + + ++ +GL+ G +QFGN +SE
Sbjct: 29 TRKIAKQPNYQVGDAKPLHMPKERKKFPDYKYGESNIFKQSNKGLYGGSFVQFGNNISES 88
Query: 64 GGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
KTR+ W PNV +K L+S ++R I +K+T L+ I K GGID YL K
Sbjct: 89 KA-KTRKKWLPNVVKKGLWSETLNRKISIKMTAKVLKTISKEGGIDNYLTK 138
>gi|6323847|ref|NP_013918.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Saccharomyces
cerevisiae S288c]
gi|1350795|sp|P36525.2|RM24_YEAST RecName: Full=54S ribosomal protein L24, mitochondrial; AltName:
Full=YmL14/YmL24; Flags: Precursor
gi|642285|emb|CAA87814.1| ribosomal protein [Saccharomyces cerevisiae]
gi|45269854|gb|AAS56308.1| YMR193W [Saccharomyces cerevisiae]
gi|285814196|tpg|DAA10091.1| TPA: mitochondrial 54S ribosomal protein YmL24/YmL14 [Saccharomyces
cerevisiae S288c]
gi|392297359|gb|EIW08459.1| Mrpl24p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 258
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 10/111 (9%)
Query: 13 VRKVGGEKNLAPGVKESL-----KKCVPDSRI----VMNRAKRGLFAGKHIQFGNRVSED 63
RK+ + N G + L +K PD + + ++ +GL+ G +QFGN +SE
Sbjct: 29 TRKIAKQPNYQVGDAKPLHMPKERKKFPDYKYGESNIFKQSNKGLYGGSFVQFGNNISES 88
Query: 64 GGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
KTR+ W PNV +K L+S ++R I +K+T L+ I K GGID YL K
Sbjct: 89 KA-KTRKKWLPNVVKKGLWSETLNRKISIKMTAKVLKTISKEGGIDNYLTK 138
>gi|349580481|dbj|GAA25641.1| K7_Mrpl24p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 258
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 10/111 (9%)
Query: 13 VRKVGGEKNLAPGVKESL-----KKCVPDSRI----VMNRAKRGLFAGKHIQFGNRVSED 63
RK+ + N G + L +K PD + + ++ +GL+ G +QFGN +SE
Sbjct: 29 TRKIAKQPNYQVGDAKPLHMPKERKKFPDYKYGESNIFKQSNKGLYGGSFVQFGNNISES 88
Query: 64 GGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
KTR+ W PNV +K L+S ++R I +K+T L+ I K GGID YL K
Sbjct: 89 KA-KTRKKWLPNVVKKGLWSETLNRKISIKMTAKVLKTISKEGGIDNYLTK 138
>gi|151945896|gb|EDN64128.1| YmL14 [Saccharomyces cerevisiae YJM789]
gi|190408418|gb|EDV11683.1| 60S ribosomal protein L24, mitochondrial precursor [Saccharomyces
cerevisiae RM11-1a]
gi|256271573|gb|EEU06615.1| Mrpl24p [Saccharomyces cerevisiae JAY291]
gi|259148778|emb|CAY82023.1| Mrpl24p [Saccharomyces cerevisiae EC1118]
gi|323336086|gb|EGA77359.1| Mrpl24p [Saccharomyces cerevisiae Vin13]
gi|323347014|gb|EGA81290.1| Mrpl24p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763905|gb|EHN05431.1| Mrpl24p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 258
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 10/111 (9%)
Query: 13 VRKVGGEKNLAPGVKESL-----KKCVPDSRI----VMNRAKRGLFAGKHIQFGNRVSED 63
RK+ + N G + L +K PD + + ++ +GL+ G +QFGN +SE
Sbjct: 29 TRKIAKQPNYQVGDAKPLHMPKERKKFPDYKYGESNIFKQSNKGLYGGSFVQFGNNISES 88
Query: 64 GGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
KTR+ W PNV +K L+S ++R I +K+T L+ I K GGID YL K
Sbjct: 89 KA-KTRKKWLPNVVKKGLWSETLNRKISIKMTAKVLKTISKEGGIDNYLTK 138
>gi|50307287|ref|XP_453622.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Kluyveromyces
lactis NRRL Y-1140]
gi|49642756|emb|CAH00718.1| KLLA0D12562p [Kluyveromyces lactis]
Length = 255
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ ++ +GL+ IQFGN ++E KTRR+W PNV K L+S ++R I +K+T L
Sbjct: 62 IYKQSNKGLYGASFIQFGNNIAE-SKTKTRRSWSPNVIRKGLWSETLNRKISIKMTAKVL 120
Query: 100 RCIDKAGGIDEYLLK 114
R I K GGID YL K
Sbjct: 121 RTITKEGGIDNYLTK 135
>gi|328774136|gb|EGF84173.1| hypothetical protein BATDEDRAFT_21979 [Batrachochytrium
dendrobatidis JAM81]
Length = 185
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%)
Query: 48 LFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGG 107
L K I FG +VSE G N++RR W PNVQ L+S +D +I +++T ALR ID GG
Sbjct: 45 LLHDKKITFGEQVSEAGKNRSRRVWYPNVQYISLYSRALDMNIWTRISTAALREIDHKGG 104
Query: 108 IDEYLLKTPYHKMDTEMGLYWKTKIEKLYEELGQTEVA 145
DEY++ + E+ ++ +I K Y+ Q +A
Sbjct: 105 FDEYIISVADKLLPCEIAKMYRDRILKQYDANTQGTMA 142
>gi|212542117|ref|XP_002151213.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Talaromyces
marneffei ATCC 18224]
gi|210066120|gb|EEA20213.1| 50S ribosomal protein L24 [Talaromyces marneffei ATCC 18224]
Length = 237
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
V +A GL+ G I FGN++S+ G NK TRR+WKPNV+ K++ S + + VK+T
Sbjct: 59 VYKQADSGLYGGVSISFGNKISK-GRNKGKTRRSWKPNVRWKKMPSEALGEDVFVKLTRK 117
Query: 98 ALRCIDKAGGIDEYLLKTPYHKMDTEMGLY-WK 129
ALR I K GG+D YLL ++ E+GL WK
Sbjct: 118 ALRTIRKCGGLDNYLLSDKPSRLK-ELGLAGWK 149
>gi|414590488|tpg|DAA41059.1| TPA: hypothetical protein ZEAMMB73_613936 [Zea mays]
Length = 88
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 120 MDTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYG 179
MDTEMG+ WK IEK+Y +L + EV FF PE EAK+++ +++ A+R RRE RR +
Sbjct: 1 MDTEMGIVWKANIEKMYSDLAEIEVGFFPPEVEAKIKKGLDEVRAAKRDFRREGRRAL-- 58
Query: 180 GSSKQKQIEQGSADTQETAE 199
+KQ Q+E S +T+E
Sbjct: 59 --AKQSQLEASSVGDDQTSE 76
>gi|363748975|ref|XP_003644705.1| hypothetical protein Ecym_2136 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888338|gb|AET37888.1| Hypothetical protein Ecym_2136 [Eremothecium cymbalariae
DBVPG#7215]
Length = 255
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 5/119 (4%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ ++ +GL+ G +QFGN VSE KTRR W PN+ +K L+S + R I +K+T L
Sbjct: 60 IFKQSNKGLYGGSFVQFGNNVSE-SKQKTRRKWLPNILKKSLWSETLGRKIPIKMTAKVL 118
Query: 100 RCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQD 158
+ I K GGID YL K ++ WK + Y L + P +++K+ QD
Sbjct: 119 KTITKEGGIDNYLTKDKSARIKELGPTGWKLR----YTVLTTRDKKENPPHKDSKVVQD 173
>gi|117924123|ref|YP_864740.1| 50S ribosomal protein L28 [Magnetococcus marinus MC-1]
gi|166226586|sp|A0L5U1.1|RL28_MAGSM RecName: Full=50S ribosomal protein L28
gi|117607879|gb|ABK43334.1| LSU ribosomal protein L28P [Magnetococcus marinus MC-1]
Length = 95
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A++ GK Q GN+VS KTRR W PN+Q K L+S + + ++V ++T ALR +D
Sbjct: 2 ARKRTLGGKAPQAGNKVSHSQ-RKTRRQWMPNIQTKALWSITLGQSVKVTISTSALRSVD 60
Query: 104 KAGGIDEYLLKTPYHKMDTEM 124
AGG+D YLLK ++ M
Sbjct: 61 NAGGLDNYLLKILPSELTPSM 81
>gi|367009472|ref|XP_003679237.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Torulaspora
delbrueckii]
gi|359746894|emb|CCE90026.1| hypothetical protein TDEL_0A06940 [Torulaspora delbrueckii]
Length = 258
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ ++ +GL+ +Q+GN +SE KTRR W PNV +K L+S +++ I +K+T L
Sbjct: 65 IFKQSNKGLYGASFVQYGNNISE-SKTKTRRRWLPNVIKKGLWSETLEKKISIKMTAKVL 123
Query: 100 RCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEAKL 155
R I K GGID YL+K ++ WK + Y+ + + E P ++A L
Sbjct: 124 RTISKEGGIDNYLIKDKSARIKELGPTGWKLR----YQVMKKMECRNHPPHKDAPL 175
>gi|242769719|ref|XP_002341828.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Talaromyces
stipitatus ATCC 10500]
gi|218725024|gb|EED24441.1| 50S ribosomal protein L24 [Talaromyces stipitatus ATCC 10500]
Length = 247
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
V +A GL+ G I FGN++S+ G NK TRR+WKPNV+ K+L S + + VK+T
Sbjct: 62 VYKQADSGLYGGVTISFGNKISK-GRNKGKTRRSWKPNVRWKKLPSEALGEEVFVKLTRK 120
Query: 98 ALRCIDKAGGIDEYLLKTPYHKMDTEMGLY-WK 129
ALR I K GG+D YLL ++ E+GL WK
Sbjct: 121 ALRTIRKCGGLDNYLLCDKPSRLK-ELGLTGWK 152
>gi|403216332|emb|CCK70829.1| hypothetical protein KNAG_0F01610 [Kazachstania naganishii CBS
8797]
Length = 268
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
V ++ RGL+ G QFGNR+SE +K RR W PN+ K L+S ++R +R+++T
Sbjct: 79 VFKQSSRGLYGGAVKQFGNRISESK-HKIRRTWMPNIIRKSLWSEALNRLVRMRLTAKVY 137
Query: 100 RCIDKAGGIDEYLLK 114
R I K GG+D YLLK
Sbjct: 138 RTISKEGGLDRYLLK 152
>gi|255947924|ref|XP_002564729.1| Pc22g07040 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591746|emb|CAP97992.1| Pc22g07040 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 216
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGN--KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
A GL+ G I+FGN++S+ G N KTRR+WKPNV+ K++ S + + +KVT ALR
Sbjct: 62 ADSGLYGGASIRFGNKISK-GRNEGKTRRSWKPNVRRKKIESKALGESVYIKVTRRALRS 120
Query: 102 IDKAGGIDEYLLKTPYHKMDTEMGLY-WKTK-----IEKLYEELGQTEVAFFTPEEEAKL 155
I KA G+D YLL ++ E+G + W + + E+ + AF PE + L
Sbjct: 121 IYKAKGLDNYLLSDRPTRLK-ELGPFGWNLRHQIMQTPAIKEKFSKQRKAFGVPEPPS-L 178
Query: 156 EQDFKDMKLAQR 167
+ +D K+ R
Sbjct: 179 SEWLRDHKMEIR 190
>gi|258567372|ref|XP_002584430.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905876|gb|EEP80277.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 232
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGN--KTRRNWKPNVQEKRLFSYIMDRHIRVKVT 95
R + +A GL+ G IQFGN++S+ G N KTRR WKPN+++++++S + + + +KV
Sbjct: 58 RRIYKQADSGLYGGATIQFGNKISK-GRNEGKTRRTWKPNIRKEKIYSEALGKWLDLKVQ 116
Query: 96 THALRCIDKAGGIDEYLL 113
LR I K GG+D+YLL
Sbjct: 117 HRVLRTIKKVGGLDQYLL 134
>gi|156844322|ref|XP_001645224.1| hypothetical protein Kpol_1060p22 [Vanderwaltozyma polyspora DSM
70294]
gi|156115883|gb|EDO17366.1| hypothetical protein Kpol_1060p22 [Vanderwaltozyma polyspora DSM
70294]
Length = 256
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
Query: 15 KVGGEKNLAPGVKESLKKCVPDSRI----VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRR 70
KVG K P + K VPD + + ++ GL+ G IQ GN +SE +KTRR
Sbjct: 38 KVGDAK---PHYIPAKKPDVPDYKYGESKIFKQSNTGLYGGSFIQHGNTISESK-HKTRR 93
Query: 71 NWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
W PN+ +K L+S +++ + +K+TT LR I K GG+D YL+K
Sbjct: 94 TWLPNIVKKALWSETLNKKVSLKMTTKVLRTISKEGGLDNYLIK 137
>gi|388583992|gb|EIM24293.1| hypothetical protein WALSEDRAFT_59191, partial [Wallemia sebi CBS
633.66]
Length = 116
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
R + GL G+ Q G VS TRR+W PN+Q KRLFS + +++KV+T ALR I
Sbjct: 23 RLESGLLDGRKRQSGYNVSF-SERHTRRSWYPNIQNKRLFSDSLQDFVKMKVSTKALRSI 81
Query: 103 DKAGGIDEYLLKTPYHKMDTEMGLY 127
D+ GG+D YL+K+ D ++GLY
Sbjct: 82 DRMGGLDNYLMKSS----DDKLGLY 102
>gi|407783874|ref|ZP_11131066.1| 50S ribosomal protein L28 [Oceanibaculum indicum P24]
gi|407199405|gb|EKE69424.1| 50S ribosomal protein L28 [Oceanibaculum indicum P24]
Length = 97
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AKR GK + GN VS NKTRR + PN+QE L S ++ +RV+++T+A+R I+
Sbjct: 2 AKRCTITGKGVLVGNNVSH-ANNKTRRRFLPNLQETSLLSDVLG-MVRVRLSTNAIRTIE 59
Query: 104 KAGGIDEYLLKTPYHKMDTE 123
K GGID YLL T + TE
Sbjct: 60 KNGGIDAYLLNTRVAALTTE 79
>gi|401626203|gb|EJS44159.1| mrpl24p [Saccharomyces arboricola H-6]
Length = 258
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ ++ +GL+ G +QFGN +SE KTR+ W PN+ +K L+S ++R I +K+T L
Sbjct: 65 IFKQSNKGLYGGSFVQFGNNISESKA-KTRKKWLPNIVKKGLWSETLNRKISIKMTAKVL 123
Query: 100 RCIDKAGGIDEYLLK 114
+ I K GGID YL K
Sbjct: 124 KTISKEGGIDNYLTK 138
>gi|261199896|ref|XP_002626349.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Ajellomyces
dermatitidis SLH14081]
gi|239594557|gb|EEQ77138.1| 50S ribosomal protein L24 [Ajellomyces dermatitidis SLH14081]
gi|239607948|gb|EEQ84935.1| 50S ribosomal protein L24 [Ajellomyces dermatitidis ER-3]
gi|327350437|gb|EGE79294.1| 50S ribosomal protein L24 [Ajellomyces dermatitidis ATCC 18188]
Length = 193
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 47 GLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDK 104
GL+ G IQFGN++S+ G NK TRR WKPN++ + L+S + + +++KV LR I K
Sbjct: 65 GLYGGSRIQFGNKISK-GRNKGKTRRTWKPNIRHEELYSEALGKTLKLKVQHRVLRTIKK 123
Query: 105 AGGIDEYLL 113
GG+D+YLL
Sbjct: 124 VGGLDQYLL 132
>gi|164656903|ref|XP_001729578.1| hypothetical protein MGL_3122 [Malassezia globosa CBS 7966]
gi|159103471|gb|EDP42364.1| hypothetical protein MGL_3122 [Malassezia globosa CBS 7966]
Length = 153
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
RA+RGL+ G+ +QFGN + + +KT R W PN+Q L+S + ++ +V T A+
Sbjct: 48 TFKRAQRGLYDGRIVQFGNTIPKSR-HKTSRKWTPNIQRTTLWSETLQEYVTTRVATSAM 106
Query: 100 RCIDKAGGIDEYLLKT 115
R I+K GG+D+YL +T
Sbjct: 107 RSIEKHGGLDQYLART 122
>gi|443899246|dbj|GAC76577.1| mitochondrial/chloroplast ribosomal protein L2 [Pseudozyma
antarctica T-34]
Length = 161
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 39 IVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHA 98
++ RA+RGL+ GK IQ G+ V + KT R W PNVQ K L+S + +V+T A
Sbjct: 48 MIFKRAQRGLYDGKTIQSGHNVPKSR-QKTARTWLPNVQNKNLWSATLHTWFPARVSTSA 106
Query: 99 LRCIDKAGGIDEYLLKTPYHKM 120
LR +DK GG+D YL T K+
Sbjct: 107 LRTMDKLGGLDAYLANTRSEKL 128
>gi|255719428|ref|XP_002555994.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Lachancea
thermotolerans]
gi|238941960|emb|CAR30132.1| KLTH0H02618p [Lachancea thermotolerans CBS 6340]
Length = 273
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 8/113 (7%)
Query: 6 KEMMKKLVRKVGGEKNLAPGVKESLKKCVPDSRI----VMNRAKRGLFAGKHIQFGNRVS 61
+ + KK KVG + P +K PD + ++ +GL+ G IQ+GN V+
Sbjct: 45 RNVAKKPDYKVGDAR---PIFVPKARKAFPDYEFGESQIFKQSNKGLYGGSFIQYGNNVA 101
Query: 62 EDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
E KTRR W PNV +K L+S + R++ +++T LR + K GGID YL K
Sbjct: 102 ESK-TKTRRRWLPNVIKKGLWSEALSRNVSIRMTAKVLRTVTKEGGIDNYLTK 153
>gi|322693338|gb|EFY85202.1| 50S ribosomal protein L24 [Metarhizium acridum CQMa 102]
Length = 292
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R V ++ RGL+ I+FGN V+E NK+RR W+PNV K FS + ++ ++T
Sbjct: 89 RRVYKQSNRGLYGSARIRFGNNVAEKHNNKSRRFWRPNVHVKTFFSPSLGARVKTRLTLR 148
Query: 98 ALRCIDKAGGIDEYLLKT 115
L+ I + GGI+ YLLK+
Sbjct: 149 VLKTIRREGGIENYLLKS 166
>gi|322709867|gb|EFZ01442.1| 50S ribosomal protein L24 [Metarhizium anisopliae ARSEF 23]
Length = 292
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R + ++ RGL+ I+FGN V+E NK+RR W+PNV K FS + ++ ++T
Sbjct: 89 RRIYKQSNRGLYGSARIRFGNNVAEKHNNKSRRFWRPNVHVKTFFSPSLGARVKTRLTLR 148
Query: 98 ALRCIDKAGGIDEYLLKT 115
L+ I + GGI+ YLLK+
Sbjct: 149 VLKTIRREGGIENYLLKS 166
>gi|225559900|gb|EEH08182.1| 50S ribosomal protein L24 [Ajellomyces capsulatus G186AR]
gi|225559950|gb|EEH08232.1| 50S ribosomal protein L24 [Ajellomyces capsulatus G186AR]
Length = 187
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 47 GLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDK 104
GL+ G IQFGN++S+ G NK TRR WKPN++ + L+S + + +++KV LR I K
Sbjct: 59 GLYGGSTIQFGNKISK-GRNKGKTRRTWKPNIRHEELYSEALGKTLQLKVQHRVLRTIKK 117
Query: 105 AGGIDEYLL 113
GG+D+YLL
Sbjct: 118 VGGLDQYLL 126
>gi|240276199|gb|EER39711.1| 50S ribosomal protein L24 [Ajellomyces capsulatus H143]
gi|325089935|gb|EGC43245.1| 50S ribosomal protein [Ajellomyces capsulatus H88]
Length = 187
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 47 GLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDK 104
GL+ G IQFGN++S+ G NK TRR WKPN++ + L+S + + +++KV LR I K
Sbjct: 59 GLYGGSTIQFGNKISK-GRNKGKTRRTWKPNIRHEELYSEALGKTLQLKVQHRVLRTIKK 117
Query: 105 AGGIDEYLL 113
GG+D+YLL
Sbjct: 118 VGGLDQYLL 126
>gi|406603622|emb|CCH44877.1| 54S ribosomal protein L24, mitochondrial [Wickerhamomyces ciferrii]
Length = 277
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
++ RGL+ G+ + G+R+SE NK +R +KPNV KRL+S I++R IR+++T LR I
Sbjct: 72 QSNRGLYGGQFRKTGHRISEFR-NKVKRVFKPNVHRKRLWSEILERDIRIRLTARVLRTI 130
Query: 103 DKAGGIDEYLLKTPYHKMDTEMG 125
K GG+D Y+LK +M E+G
Sbjct: 131 GKEGGVDNYILKDKSARMK-ELG 152
>gi|154287660|ref|XP_001544625.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Ajellomyces
capsulatus NAm1]
gi|150408266|gb|EDN03807.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 191
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 47 GLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDK 104
GL+ G IQFGN++S+ G NK TRR WKPN++ + L+S + + +++KV LR I K
Sbjct: 59 GLYGGSTIQFGNKISK-GRNKGKTRRTWKPNIRHEELYSEALGKTLQLKVQHRVLRTIKK 117
Query: 105 AGGIDEYLL 113
GG+D+YLL
Sbjct: 118 VGGLDQYLL 126
>gi|430811554|emb|CCJ30997.1| unnamed protein product [Pneumocystis jirovecii]
Length = 193
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
R+ +GL+A I+FGN V + +KTRR W PN+Q+K L+S ++ I++KV+ ALR I
Sbjct: 81 RSDKGLYANCCIRFGNNVPK-SKHKTRRKWLPNIQKKSLYSKALNTFIQLKVSMRALRTI 139
Query: 103 DKAGGIDEYL 112
K GG+DEY+
Sbjct: 140 VKVGGLDEYV 149
>gi|397635220|gb|EJK71772.1| hypothetical protein THAOC_06758 [Thalassiosira oceanica]
Length = 141
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 38/51 (74%)
Query: 67 KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPY 117
+TRR WKPNVQ KRL+S ++D +R VTT ALR IDK GG+D YLL + +
Sbjct: 26 RTRRKWKPNVQMKRLYSEVLDEMLRFHVTTSALRTIDKYGGLDNYLLNSRH 76
>gi|302416479|ref|XP_003006071.1| 54S ribosomal protein L24 [Verticillium albo-atrum VaMs.102]
gi|261355487|gb|EEY17915.1| 54S ribosomal protein L24 [Verticillium albo-atrum VaMs.102]
Length = 259
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 34 VPD----SRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRH 89
+PD R++ ++ GL+A I+ GN +S D KT R W+PN+ KRL+S +
Sbjct: 54 IPDYPLGPRLIYKQSNGGLYATARIRRGNNISSDHKVKTPRAWRPNIHRKRLWSAALGVW 113
Query: 90 IRVKVTTHALRCIDKAGGIDEYLLKTP 116
+R +++ LR I K GG+D Y+LK P
Sbjct: 114 VRARLSLRVLRTIRKEGGLDAYVLKRP 140
>gi|354593909|ref|ZP_09011952.1| 50S ribosomal protein L28 [Commensalibacter intestini A911]
gi|353673020|gb|EHD14716.1| 50S ribosomal protein L28 [Commensalibacter intestini A911]
Length = 110
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + GN VS NK RR + PN+Q+ L S I+ IR++VT H LR I+
Sbjct: 12 SRRCQITGKGVLTGNNVSH-ANNKNRRRFLPNLQDYSLLSDILGHSIRLRVTNHGLRTIE 70
Query: 104 KAGGIDEYLLKTPYHKMDTE 123
GG+D +LL TP K+ E
Sbjct: 71 HNGGLDNFLLTTPNRKLTVE 90
>gi|330906445|ref|XP_003295477.1| hypothetical protein PTT_01224 [Pyrenophora teres f. teres 0-1]
gi|311333213|gb|EFQ96431.1| hypothetical protein PTT_01224 [Pyrenophora teres f. teres 0-1]
Length = 486
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ +A +GL+ K ++FGN VS+ KTRR W PNV K L+S + + I++ + H L
Sbjct: 79 LFKQANKGLYGHKRVRFGNNVSKKTETKTRRKWTPNVLTKSLYSVALKKKIKLALAKHIL 138
Query: 100 RCIDKAGGIDEYLLK 114
+ ID+ GG+DEYLLK
Sbjct: 139 KIIDREGGLDEYLLK 153
>gi|390605317|gb|EIN14708.1| mitochondrial 50S ribosomal protein L28-like protein, partial
[Punctularia strigosozonata HHB-11173 SS5]
Length = 105
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
RA+ GL+ G Q GN V G KTRR W PNV K FS +++RVKV+ AL+ I
Sbjct: 8 RAQTGLYHGVMKQSGNNVPFSKG-KTRRTWLPNVHNKTFFSETFQKNVRVKVSMKALKTI 66
Query: 103 DKAGGIDEYLLKT 115
K GGID YL KT
Sbjct: 67 KKNGGIDNYLRKT 79
>gi|425766281|gb|EKV04905.1| 50S ribosomal protein L24 [Penicillium digitatum PHI26]
gi|425779012|gb|EKV17107.1| 50S ribosomal protein L24 [Penicillium digitatum Pd1]
Length = 216
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 9/131 (6%)
Query: 44 AKRGLFAGKHIQFGNRVSED-GGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
A GL+ G I+FGN++S+ KTRR+WKPNV+ K++ S + + +KVT ALR I
Sbjct: 62 ADSGLYGGASIRFGNKISKGRNAGKTRRSWKPNVRRKKIESEALGESLFIKVTRRALRSI 121
Query: 103 DKAGGIDEYLLKTPYHKMDTEMGLY-WKTK-----IEKLYEELGQTEVAFFTPEEEAKLE 156
KA G+D YLL ++ E+G + W + + E+ + AF PE L
Sbjct: 122 YKAKGLDNYLLSDRPTRLK-ELGPFGWNLRHQIMQTPAIKEKFAKQRKAFGVPEPPT-LG 179
Query: 157 QDFKDMKLAQR 167
+ +D +L R
Sbjct: 180 KWMRDHRLEIR 190
>gi|310798120|gb|EFQ33013.1| ribosomal L28 family protein [Glomerella graminicola M1.001]
Length = 256
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R++ ++ GL+ I+ G+ VSE G T R W+PNV KRL+S + +R ++TT
Sbjct: 62 RLLYKQSNNGLYGAARIRHGHNVSEKHGQVTPRTWRPNVHRKRLWSEALGAWVRARLTTR 121
Query: 98 ALRCIDKAGGIDEYLLK 114
LR + + GGID Y+ K
Sbjct: 122 VLRTVRREGGIDAYVTK 138
>gi|302899398|ref|XP_003048042.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728974|gb|EEU42329.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 262
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R V ++ RGL+ I+FGN V+E NK RR W+PNV K +D +++ ++T
Sbjct: 58 RRVYKQSNRGLYGSARIRFGNTVAEKYNNKARRFWRPNVHVKSFHLPAVDANVKTRLTLR 117
Query: 98 ALRCIDKAGGIDEYLLKT 115
L+ I + GG+ EYLLK+
Sbjct: 118 VLKTIRREGGLQEYLLKS 135
>gi|398410578|ref|XP_003856637.1| hypothetical protein MYCGRDRAFT_32483, partial [Zymoseptoria
tritici IPO323]
gi|339476522|gb|EGP91613.1| hypothetical protein MYCGRDRAFT_32483 [Zymoseptoria tritici IPO323]
Length = 165
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 50/70 (71%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++ GL+ G+ IQFGN V E K+RR W PN+ ++LFS ++R ++V+V++ LR ID
Sbjct: 56 SRLGLYGGQRIQFGNNVGEKFKTKSRRTWHPNIFTRKLFSKSLNRVVQVRVSSRVLRTID 115
Query: 104 KAGGIDEYLL 113
K GG+DEYLL
Sbjct: 116 KLGGLDEYLL 125
>gi|162148837|ref|YP_001603298.1| 50S ribosomal protein L28 [Gluconacetobacter diazotrophicus PAl 5]
gi|209545415|ref|YP_002277644.1| 50S ribosomal protein L28 [Gluconacetobacter diazotrophicus PAl 5]
gi|189029443|sp|A9HS05.1|RL28_GLUDA RecName: Full=50S ribosomal protein L28
gi|161787414|emb|CAP57009.1| putative 50S ribosomal protein L28 [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533092|gb|ACI53029.1| ribosomal protein L28 [Gluconacetobacter diazotrophicus PAl 5]
Length = 100
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + GN VS NK+RR + PN+QE L S I+ +R++++T+ +R ++
Sbjct: 2 SRRCQITGKGVLTGNNVSH-ANNKSRRRFLPNLQETSLLSDILGSAVRLRLSTNGIRTVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTE 123
GG+D +LL TP K+ TE
Sbjct: 61 HNGGLDAFLLSTPNRKLPTE 80
>gi|380489831|emb|CCF36437.1| ribosomal L28 family protein [Colletotrichum higginsianum]
Length = 257
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R++ ++ GL+ I+ G+ VSE T R W+PNV KRL+S + +R+++TT
Sbjct: 63 RLLYKQSNNGLYGSARIRHGHNVSEKHHQVTARTWRPNVHYKRLWSDALGAWVRIRLTTR 122
Query: 98 ALRCIDKAGGIDEYLLK 114
LR +++ GGID Y+ K
Sbjct: 123 VLRTVEREGGIDAYVTK 139
>gi|365854460|ref|ZP_09394534.1| ribosomal protein L28 [Acetobacteraceae bacterium AT-5844]
gi|363720110|gb|EHM03400.1| ribosomal protein L28 [Acetobacteraceae bacterium AT-5844]
Length = 101
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK +Q GN VS NKTRR + PN+QE FS ++ I+++++T+ +R ++
Sbjct: 2 ARRCAITGKGVQAGNNVSH-ANNKTRRRFLPNLQETSFFSDVLGTSIQIRLSTNGIRTVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTE 123
GG+D +LL TP ++ E
Sbjct: 61 HNGGLDAFLLGTPDRRLPEE 80
>gi|296532524|ref|ZP_06895238.1| 50S ribosomal protein L28 [Roseomonas cervicalis ATCC 49957]
gi|296267150|gb|EFH13061.1| 50S ribosomal protein L28 [Roseomonas cervicalis ATCC 49957]
Length = 103
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK + GN VS NKTRR + PN+QE FS ++ ++++++T+ +R ++
Sbjct: 2 ARRCGITGKGVLTGNNVSH-ANNKTRRRFLPNLQETSFFSDVLGTSVQIRLSTNGIRTVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKI 132
GG+D +LL TP K+ TE L K +I
Sbjct: 61 HNGGLDSFLLGTPDRKLPTE-ALVLKRRI 88
>gi|336372870|gb|EGO01209.1| hypothetical protein SERLA73DRAFT_179326 [Serpula lacrymans var.
lacrymans S7.3]
gi|336385711|gb|EGO26858.1| hypothetical protein SERLADRAFT_464402 [Serpula lacrymans var.
lacrymans S7.9]
Length = 181
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Query: 37 SRIVM--NRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKV 94
+R+ M R++ GLF GK Q+GN V +KTRR W PNVQ KRL S ++ +++K+
Sbjct: 12 TRVSMPFKRSQEGLFHGKMKQYGNNVP-FSKHKTRRTWLPNVQSKRLVSNLLGEELKLKL 70
Query: 95 TTHALRCIDKAGGIDEYLLKTPY 117
TT AL+ I K GG+D YLL T +
Sbjct: 71 TTRALKSIKKHGGVDNYLLNTKH 93
>gi|254579857|ref|XP_002495914.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Zygosaccharomyces
rouxii]
gi|238938805|emb|CAR26981.1| ZYRO0C05940p [Zygosaccharomyces rouxii]
Length = 256
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
V ++ +GL+ ++Q+GN ++E KTRR W PNV K L+S ++R I + +T L
Sbjct: 62 VFKQSNKGLYGASYVQYGNNIAESK-TKTRRRWLPNVIRKGLWSETLERKISLGMTAKVL 120
Query: 100 RCIDKAGGIDEYLLK 114
R I K GGID YL K
Sbjct: 121 RTISKEGGIDNYLTK 135
>gi|302689635|ref|XP_003034497.1| hypothetical protein SCHCODRAFT_37408 [Schizophyllum commune H4-8]
gi|300108192|gb|EFI99594.1| hypothetical protein SCHCODRAFT_37408, partial [Schizophyllum
commune H4-8]
Length = 96
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
RA+ GLF GK ++GN V KTRR W PN++ K + S + +++K+TT A+R +
Sbjct: 13 RAQEGLFHGKTKRYGNNVPHSM-QKTRRTWLPNIRSKTMHSESLGL-MKLKITTTAMRAV 70
Query: 103 DKAGGIDEYLLKTPYHKM 120
K GG+D+Y+L+TP K+
Sbjct: 71 KKMGGLDDYVLRTPTRKL 88
>gi|392378205|ref|YP_004985364.1| 50S ribosomal protein L28 [Azospirillum brasilense Sp245]
gi|356879686|emb|CCD00612.1| 50S ribosomal protein L28 [Azospirillum brasilense Sp245]
Length = 100
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK QFGN VS NKTRR ++PN+QE L S + + +R++++T+A+R I+
Sbjct: 2 ARRCSVTGKGTQFGNNVSH-ANNKTRRRFQPNLQETALLSDALGQMVRLRISTNAIRSIE 60
Query: 104 KAGGIDEYLL 113
GG+D +LL
Sbjct: 61 HKGGLDAFLL 70
>gi|331239536|ref|XP_003332421.1| hypothetical protein PGTG_13806 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309311411|gb|EFP88002.1| hypothetical protein PGTG_13806 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 255
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 34 VPDSRIVMNRAKRG---LFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHI 90
VP +I KRG L+ G ++ G+ VS+ ++T+R WKPNVQ L+S ++ + +
Sbjct: 61 VPPLKITRQHTKRGDYGLYDGLKVRAGDNVSKSK-HRTKRTWKPNVQRTTLWSEVLGQSL 119
Query: 91 RVKVTTHALRCIDKAGGIDEYLLK 114
++KVT+ AL+ ID+ GG+D Y+L+
Sbjct: 120 QLKVTSAALKSIDRMGGLDRYVLQ 143
>gi|340778631|ref|ZP_08698574.1| 50S ribosomal protein L28 [Acetobacter aceti NBRC 14818]
Length = 99
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + GN VS NK+RR + PN+QE + S I+ I ++VTT LR I+
Sbjct: 2 SRRCEITGKGVLTGNNVSH-ANNKSRRRFLPNLQEVSVLSDILGTPISMRVTTRGLRTIE 60
Query: 104 KAGGIDEYLLKTPYHKMDTE 123
GG+D YLL TP + TE
Sbjct: 61 HNGGLDSYLLDTPNRNLTTE 80
>gi|145518488|ref|XP_001445116.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412560|emb|CAK77719.1| unnamed protein product [Paramecium tetraurelia]
Length = 289
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 26 VKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYI 85
+K +K +P I+ ++ L+ GK + GN+ KTRR+W PNVQ++ S I
Sbjct: 44 IKRICQKQIPKHTIM---SQFCLWHGKQPKSGNQTC-FSEKKTRRSWMPNVQKQTYESLI 99
Query: 86 MDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLY 127
+ R I VKVTT ++CI KAG D Y+L T +D+ G Y
Sbjct: 100 LGRKIHVKVTTKTMKCIRKAGSFDNYVLLTKPQDLDSIYGEY 141
>gi|294085472|ref|YP_003552232.1| 50S ribosomal protein L28 [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665047|gb|ADE40148.1| LSU ribosomal protein L28P [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 95
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AKR GK + GN VS N+TRR + PN+Q+ + S I+DR I ++++T A+R ++
Sbjct: 2 AKRCQITGKTVMAGNNVSH-ANNRTRRRFLPNLQQASMQSEILDRKISLRISTSAIRTVE 60
Query: 104 KAGGIDEYLLK 114
K GGID +L++
Sbjct: 61 KHGGIDAFLMQ 71
>gi|358389082|gb|EHK26675.1| hypothetical protein TRIVIDRAFT_50104 [Trichoderma virens Gv29-8]
Length = 280
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R V ++ GL+ I+FGN V+E NK+RR W+PNV K + I+ ++T
Sbjct: 73 RRVYKQSNNGLYGSARIRFGNNVAEKHNNKSRRFWRPNVHVKTFLMPSLGARIKTRLTLR 132
Query: 98 ALRCIDKAGGIDEYLLKT 115
L+ I + GGI+ YLLK+
Sbjct: 133 VLKTIRREGGIENYLLKS 150
>gi|408399405|gb|EKJ78508.1| hypothetical protein FPSE_01317 [Fusarium pseudograminearum CS3096]
Length = 256
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R + ++ +GL+ I+FGN V+E NK RR W+PNV K +D +++ ++T
Sbjct: 55 RQLYKQSNKGLYGSARIRFGNTVAEKYNNKARRYWRPNVHVKVFKLPALDANVKTRLTLR 114
Query: 98 ALRCIDKAGGIDEYLLKT 115
L+ I + GG+ EYLLK+
Sbjct: 115 VLKTIRREGGLQEYLLKS 132
>gi|196014954|ref|XP_002117335.1| hypothetical protein TRIADDRAFT_61404 [Trichoplax adhaerens]
gi|190580088|gb|EDV20174.1| hypothetical protein TRIADDRAFT_61404 [Trichoplax adhaerens]
Length = 254
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 57/89 (64%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
+++GL+ G+ + G ++ +K +R W PNVQ +LFS I+D+ +RV T AL+ I+
Sbjct: 19 SQKGLWGGEGVVSGYYTTKRRKHKIKRKWHPNVQTMKLFSDILDQTLRVPTTMSALKQIE 78
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKI 132
+AG +D Y+L+TP ++++E + KI
Sbjct: 79 RAGSLDNYILRTPDKQLNSEFAFDLRKKI 107
>gi|114327278|ref|YP_744435.1| 50S ribosomal protein L28 [Granulibacter bethesdensis CGDNIH1]
gi|114315452|gb|ABI61512.1| LSU ribosomal protein L28P [Granulibacter bethesdensis CGDNIH1]
Length = 133
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Query: 39 IVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHA 98
++M+R R GK + GN VS NKTRR + PN+Q L S + +R++++T A
Sbjct: 32 LIMSR--RCQITGKGVLTGNNVSH-ANNKTRRRFLPNLQVAGLLSDTLGTSVRLRLSTRA 88
Query: 99 LRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
+R ++K GGID +LL TP ++ TE L K +I +
Sbjct: 89 IRTVEKNGGIDAFLLGTPDRQLPTE-ALELKRRITR 123
>gi|58038593|ref|YP_190557.1| 50S ribosomal protein L28 [Gluconobacter oxydans 621H]
gi|67461239|sp|Q5FUP5.1|RL28_GLUOX RecName: Full=50S ribosomal protein L28
gi|58001007|gb|AAW59901.1| LSU ribosomal protein L28P [Gluconobacter oxydans 621H]
Length = 100
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + GN VS NK+RR + PN+QE L S I+ +R++++T +R ++
Sbjct: 2 SRRCQITGKGVLTGNNVSH-ANNKSRRRFLPNLQETTLISDILGASVRMRLSTDGIRTVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTE 123
GG+D +LL TP K+ TE
Sbjct: 61 HNGGLDSFLLGTPNRKLPTE 80
>gi|349685685|ref|ZP_08896827.1| 50S ribosomal protein L28 [Gluconacetobacter oboediens 174Bp2]
Length = 99
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + GN VS NK+RR + PN+QE L S I+ + +++TT+ +R ++
Sbjct: 2 SRRCQITGKGVLTGNNVSH-ANNKSRRRFLPNLQETSLLSDILGTAVPMRMTTNGIRTVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
GG+D +LL TP K+ E L K +I ++ E+
Sbjct: 61 HNGGLDSFLLSTPNRKLTPE-ALTVKRRILRVQEK 94
>gi|330994027|ref|ZP_08317957.1| 50S ribosomal protein L28 [Gluconacetobacter sp. SXCC-1]
gi|347760120|ref|YP_004867681.1| 50S ribosomal protein L28 [Gluconacetobacter xylinus NBRC 3288]
gi|329758973|gb|EGG75487.1| 50S ribosomal protein L28 [Gluconacetobacter sp. SXCC-1]
gi|347579090|dbj|BAK83311.1| LSU ribosomal protein L28P [Gluconacetobacter xylinus NBRC 3288]
Length = 99
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + GN VS NK+RR + PN+QE L S I+ + +++TT+ +R ++
Sbjct: 2 SRRCQITGKGVLTGNNVSH-ANNKSRRRFLPNLQETSLLSDILGAAVPMRMTTNGIRTVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
GG+D +LL TP K+ E L K +I ++ E+
Sbjct: 61 HNGGLDSFLLSTPNRKLTPE-ALTVKRRILRVQEK 94
>gi|46138459|ref|XP_390920.1| hypothetical protein FG10744.1 [Gibberella zeae PH-1]
Length = 256
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R + ++ +GL+ I+FGN V+E NK RR W+PNV K +D +++ ++T
Sbjct: 55 RQLYKQSNKGLYGSARIRFGNTVAEKYNNKARRFWRPNVHVKVFKLPALDANVKTRLTLR 114
Query: 98 ALRCIDKAGGIDEYLLKT 115
L+ I + GG+ EYLLK+
Sbjct: 115 VLKTIRREGGLQEYLLKS 132
>gi|209966402|ref|YP_002299317.1| 50S ribosomal protein L28 [Rhodospirillum centenum SW]
gi|226699154|sp|B6IW31.1|RL28_RHOCS RecName: Full=50S ribosomal protein L28
gi|209959868|gb|ACJ00505.1| ribosomal protein L28 [Rhodospirillum centenum SW]
Length = 99
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q GN VS NK+RR W PN+QE L S + R +R++++T+ +R I+ GG+
Sbjct: 7 VTGKGVQTGNNVSH-ANNKSRRRWLPNLQETSLLSDTLGRMVRLRLSTNGIRTIEHKGGL 65
Query: 109 DEYLLKTPYHKMDTE 123
D LL P +++ +
Sbjct: 66 DAALLDIPDARLNQD 80
>gi|448513215|ref|XP_003866895.1| ribosomal protein, large subunit, mitochondrial precursor [Candida
orthopsilosis Co 90-125]
gi|380351233|emb|CCG21457.1| ribosomal protein, large subunit, mitochondrial precursor [Candida
orthopsilosis Co 90-125]
Length = 270
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 7/110 (6%)
Query: 41 MNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALR 100
R RGL+ G + SE NK R KPN++ +L+S I+++ I KV+T LR
Sbjct: 89 FKRQNRGLYGGLQRKRSKTCSE-YFNKNLRAHKPNIRRAKLWSEILNKKINTKVSTRVLR 147
Query: 101 CIDKAGGIDEYLLKTPYHKMDTEMGLY-WKTKIEKLYE----ELGQTEVA 145
+ K GG+D+YLLK+ ++ T MGL WK + E L E E G+TEV+
Sbjct: 148 TLTKEGGVDQYLLKSTPARIKT-MGLTGWKLRYELLNELEQRERGETEVS 196
>gi|145517660|ref|XP_001444713.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412135|emb|CAK77316.1| unnamed protein product [Paramecium tetraurelia]
Length = 289
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 26 VKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYI 85
+K +K +P I+ ++ L+ GK + GN+ KTRR+W PNVQ++ S I
Sbjct: 44 IKRICQKQIPKHTIM---SQFCLWHGKQPKSGNQTC-FSEKKTRRSWMPNVQKQTYESLI 99
Query: 86 MDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLY 127
+ R I VKVT ++CI KAG D Y+L T +D+ G Y
Sbjct: 100 LGRRIHVKVTAKTMKCIRKAGSFDNYILLTKPQDLDSIYGEY 141
>gi|296116557|ref|ZP_06835167.1| 50S ribosomal protein L28 [Gluconacetobacter hansenii ATCC 23769]
gi|295976769|gb|EFG83537.1| 50S ribosomal protein L28 [Gluconacetobacter hansenii ATCC 23769]
Length = 100
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + GN VS NK+RR + PN+QE L S I+ +R++++T+ +R ++
Sbjct: 2 SRRCQITGKGVLTGNNVSH-ANNKSRRRFLPNLQETSLLSDILGAPVRLRLSTNGIRTVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTE 123
GG+D +LL TP K+ E
Sbjct: 61 HNGGLDAFLLSTPNRKLTPE 80
>gi|340504051|gb|EGR30540.1| hypothetical protein IMG5_129580 [Ichthyophthirius multifiliis]
Length = 261
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
R+++GLF GK + G + TRR + NV++K L S I+ + I ++++T A+RCI
Sbjct: 31 RSQKGLFHGKQSKSGKKYCYSDKRNTRR-FGVNVRKKYLQSDILKQKIHLRLSTKAIRCI 89
Query: 103 DKAGGIDEYLLKTPYHKMDTEMGLYWK 129
DK GG+D Y+L T KMD+ G Y +
Sbjct: 90 DKYGGLDNYILLTRPKKMDSLYGEYLR 116
>gi|427429267|ref|ZP_18919302.1| LSU ribosomal protein L28p [Caenispirillum salinarum AK4]
gi|425880460|gb|EKV29156.1| LSU ribosomal protein L28p [Caenispirillum salinarum AK4]
Length = 99
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 45 KRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDK 104
+R GK + GN VS NKTRR W N+Q + S + +R++++ H LR ++
Sbjct: 3 RRCAITGKGVMTGNNVSH-AHNKTRRTWNVNLQVTSMMSDALGEPVRLRLSAHGLRTVEH 61
Query: 105 AGGIDEYLLKTPYHKMDTE 123
GGID +LL TP K+ +E
Sbjct: 62 RGGIDAFLLSTPSTKLTSE 80
>gi|291000967|ref|XP_002683050.1| predicted protein [Naegleria gruberi]
gi|284096679|gb|EFC50306.1| predicted protein [Naegleria gruberi]
Length = 87
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
R +GL+ IQ GN+ S KT+R W PN +L+S +D ++++ T+ ALRCI
Sbjct: 2 RFDKGLYHDTLIQTGNQRSF-SERKTKRKWMPNSHWVKLYSEALDTRVQLRATSKALRCI 60
Query: 103 DKAGGIDEYLLKTPYHKMDTEMGLY 127
DK+GG+D YL++T + + G++
Sbjct: 61 DKSGGLDNYLIETRPELVGSRYGIW 85
>gi|358396102|gb|EHK45489.1| hypothetical protein TRIATDRAFT_257431 [Trichoderma atroviride IMI
206040]
Length = 289
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R+V ++ GL+ I+FGN V+ NK RR W+PNV K + I+ ++T
Sbjct: 80 RLVYKQSNAGLYGSARIRFGNTVAPKHNNKARRLWRPNVHVKTFLIPSLGARIKTRLTLR 139
Query: 98 ALRCIDKAGGIDEYLLKT 115
L+ I + GGI+ YLLK+
Sbjct: 140 VLKTIRREGGIENYLLKS 157
>gi|349699202|ref|ZP_08900831.1| 50S ribosomal protein L28 [Gluconacetobacter europaeus LMG 18494]
Length = 99
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + GN VS NK+RR + PN+QE L S I+ + +++TT+ +R ++
Sbjct: 2 SRRCQITGKGVLTGNNVSH-ANNKSRRRFLPNLQETSLLSDILGTAVPMRMTTNGIRTVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
GG+D +LL TP K+ E + K +I ++ E+
Sbjct: 61 HNGGLDAFLLSTPNRKLTPE-AMTVKRRILRVQEK 94
>gi|410943149|ref|ZP_11374890.1| 50S ribosomal protein L28 [Gluconobacter frateurii NBRC 101659]
Length = 100
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + GN VS NK+RR + PN+QE L S I+ +R++++T+ +R I+
Sbjct: 2 SRRCQVTGKGVLTGNNVSH-ANNKSRRRFLPNLQETTLISDILGASVRMRLSTNGIRTIE 60
Query: 104 KAGGIDEYLLKTPYHKMDTE 123
GG+D +LL TP K+ E
Sbjct: 61 HNGGLDSFLLGTPNRKLPEE 80
>gi|23016453|ref|ZP_00056209.1| COG0227: Ribosomal protein L28 [Magnetospirillum magnetotacticum
MS-1]
Length = 101
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK + GN VS NKTRR + PN+QE L S + +R++++T+ L+ I+
Sbjct: 2 ARRCAITGKGVLTGNNVSH-ANNKTRRRFLPNLQEASLLSDALGHAVRLRISTNGLKTIE 60
Query: 104 KAGGIDEYLLKTPYHKMDTE 123
GGID +LL K+ E
Sbjct: 61 HNGGIDSFLLSVATTKLSAE 80
>gi|328849475|gb|EGF98654.1| hypothetical protein MELLADRAFT_50935 [Melampsora larici-populina
98AG31]
Length = 244
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Query: 34 VPDSRIVMNRAKR---GLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHI 90
VP +I KR GL+ G ++ G+ + + ++T+R W PNVQ+ L+S ++++ +
Sbjct: 52 VPPLKITRQHTKRADYGLYDGLKVKAGDNIPK-SKHRTKRVWNPNVQKSSLWSEVLNQSL 110
Query: 91 RVKVTTHALRCIDKAGGIDEYLLK 114
++K+TT AL+ IDK GG+D Y+L+
Sbjct: 111 QLKLTTAALKTIDKVGGLDRYVLQ 134
>gi|146163214|ref|XP_001011035.2| ribosomal protein L28 containing protein [Tetrahymena thermophila]
gi|146146077|gb|EAR90790.2| ribosomal protein L28 containing protein [Tetrahymena thermophila
SB210]
Length = 289
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 43 RAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
R+++GLF GK + G + K+ R WK NV EK L+S I+ + IR+++++ LR I
Sbjct: 59 RSQKGLFHGKQPKTGLQTC-FSEKKSIRWWKVNVHEKYLWSDILQKKIRIQMSSKTLRTI 117
Query: 103 DKAGGIDEYLLKTPYHKMDTEMGLY 127
DK GG D Y+L T MD+ G Y
Sbjct: 118 DKYGGFDNYVLLTKPKNMDSLYGEY 142
>gi|347757830|ref|YP_004865392.1| 50S ribosomal protein L28 [Micavibrio aeruginosavorus ARL-13]
gi|347590348|gb|AEP09390.1| ribosomal protein L28 [Micavibrio aeruginosavorus ARL-13]
Length = 131
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + GN VS N+TRR + P+V+ +FS I+ R + VK++ + +R I+
Sbjct: 2 SRRCTVTGKGVMTGNNVSH-AKNRTRRRFLPSVKRTGMFSDILGRFVDVKLSVNGIRTIE 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
GG+D YLL T K+D ++ Y +T +K+ +
Sbjct: 61 HNGGLDSYLLDTAKTKLDPKLRAYRRTLDKKVAD 94
>gi|452962868|gb|EME67968.1| 50S ribosomal protein L28 [Magnetospirillum sp. SO-1]
Length = 101
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK + GN VS NKTRR + PN+QE L S + +R++++T+ L+ I+
Sbjct: 2 ARRCAITGKGVLTGNNVSH-ANNKTRRRFLPNLQEASLLSDALGHAVRLRISTNGLKTIE 60
Query: 104 KAGGIDEYLLKTPYHKMDTE 123
GGID +LL K+ E
Sbjct: 61 HNGGIDSFLLSIASTKLSAE 80
>gi|414343380|ref|YP_006984901.1| RpmB [Gluconobacter oxydans H24]
gi|411028715|gb|AFW01970.1| RpmB [Gluconobacter oxydans H24]
gi|453331376|dbj|GAC86955.1| 50S ribosomal protein L28 [Gluconobacter thailandicus NBRC 3255]
Length = 100
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + GN VS NK+RR + PN+QE + S I+ +R++++T+ +R I+
Sbjct: 2 SRRCQVTGKGVLTGNNVSH-ANNKSRRRFLPNLQETTMISDILGSSVRMRLSTNGIRTIE 60
Query: 104 KAGGIDEYLLKTPYHKMDTE 123
GG+D +LL TP K+ E
Sbjct: 61 HNGGLDSFLLGTPNRKLPEE 80
>gi|342882995|gb|EGU83559.1| hypothetical protein FOXB_05969 [Fusarium oxysporum Fo5176]
Length = 255
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 46/78 (58%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R V ++ +GL+ I+FGN V+E NK RR W+PNV K + +++ ++T
Sbjct: 55 RRVYKQSNKGLYGSARIRFGNTVAEKYNNKARRFWRPNVHVKVFRLPAIQANVKTRLTLR 114
Query: 98 ALRCIDKAGGIDEYLLKT 115
L+ I + GG+ EYLLK+
Sbjct: 115 VLKTIRREGGLQEYLLKS 132
>gi|357031726|ref|ZP_09093669.1| 50S ribosomal protein L28 [Gluconobacter morbifer G707]
gi|356414956|gb|EHH68600.1| 50S ribosomal protein L28 [Gluconobacter morbifer G707]
Length = 89
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTP 116
GN VS NK+RR + PN+QE L S I+ +R++++T+ +R I+ GG+D +LL TP
Sbjct: 4 GNNVSH-ANNKSRRRFLPNLQETTLISDILGASVRLRLSTNGIRTIEHNGGLDSFLLGTP 62
Query: 117 YHKMDTE 123
K+ TE
Sbjct: 63 NRKLPTE 69
>gi|344230029|gb|EGV61914.1| hypothetical protein CANTEDRAFT_115360 [Candida tenuis ATCC 10573]
Length = 240
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 46 RGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKA 105
RGL+ G + +R + GNK R+ KPN+ ++S I+D+ +VKV+T L+ I K
Sbjct: 71 RGLYGGLQ-RTSSRTCSESGNKNLRSHKPNIVSSSIYSEILDKVFKVKVSTRVLKTISKE 129
Query: 106 GGIDEYLLKTPYHKMDTEMGLYWKTKIE 133
GG+D YLLK ++ T + W+ K +
Sbjct: 130 GGLDNYLLKDKPARIKTMGKVAWRIKYD 157
>gi|19112705|ref|NP_595913.1| mitochondrial ribosomal protein subunit L28 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74626794|sp|O60091.1|RM24_SCHPO RecName: Full=54S ribosomal protein L24, mitochondrial; Flags:
Precursor
gi|3006168|emb|CAA18428.1| mitochondrial ribosomal protein subunit L28 (predicted)
[Schizosaccharomyces pombe]
Length = 176
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 41 MNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALR 100
++ ++ L+ G + GN G+KTRR W PN K L+S +++ + VT+ LR
Sbjct: 24 FSKFQQNLYGGSKTEAGNNKIPKFGHKTRRVWIPNGHSKWLYSNVLEEKFHLYVTSRVLR 83
Query: 101 CIDKAGGIDEYLLKTPYHKMDTEMGL 126
IDK GG+DEYL+K+ ++ + +GL
Sbjct: 84 TIDKEGGLDEYLVKSTPSRLKS-LGL 108
>gi|213405036|ref|XP_002173290.1| 54S ribosomal protein L24 [Schizosaccharomyces japonicus yFS275]
gi|212001337|gb|EEB06997.1| 54S ribosomal protein L24 [Schizosaccharomyces japonicus yFS275]
Length = 194
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 45 KRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDK 104
+RGL+ G +G V D G KT R W+ N KRL+S + H R+ V L+ I K
Sbjct: 44 QRGLYGGSSTYYGKNV-PDKGPKTLRTWEVNAHTKRLWSDALQMHFRLNVRARVLKTIKK 102
Query: 105 AGGIDEYLLKTPYHKMDTEMGL 126
GG+DEYLLK+ ++ ++GL
Sbjct: 103 DGGLDEYLLKSTPSRLK-QLGL 123
>gi|85709871|ref|ZP_01040936.1| ribosomal protein L28 [Erythrobacter sp. NAP1]
gi|85688581|gb|EAQ28585.1| ribosomal protein L28 [Erythrobacter sp. NAP1]
Length = 95
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q GN VS NKT+R + PN+Q L S +DR + +V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGNNVSH-ANNKTKRVFLPNLQNVTLMSEKLDRSFKFRVSTHGLRSVEHNGGL 65
Query: 109 DEYLLKTPYHKMDT 122
D +LLKT K+ T
Sbjct: 66 DNWLLKTKDDKLST 79
>gi|354546762|emb|CCE43494.1| hypothetical protein CPAR2_211380 [Candida parapsilosis]
Length = 279
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 41 MNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALR 100
R RGL+ G + SE NK R +PN++ +L+S I++ I VKV+T LR
Sbjct: 95 FKRQNRGLYGGLQRKRSKTCSE-YFNKNLRAHRPNIRRAKLWSEILNEKINVKVSTRVLR 153
Query: 101 CIDKAGGIDEYLLKTPYHKMDTEMGLY-WKTKIEKLYE----ELGQTEV 144
+ K GG+D+YLLK+ ++ T MGL WK + + L E E GQ EV
Sbjct: 154 TLTKEGGVDQYLLKSTPARIKT-MGLTGWKLRYKLLNELEQKERGQVEV 201
>gi|407773822|ref|ZP_11121122.1| 50S ribosomal protein L28 [Thalassospira profundimaris WP0211]
gi|407283268|gb|EKF08809.1| 50S ribosomal protein L28 [Thalassospira profundimaris WP0211]
Length = 97
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R +GK + G VS N+T+R + PN+Q L S + R +R+++TT+A+R I+
Sbjct: 2 ARRCPVSGKGVLVGMNVSH-AHNRTKRRFLPNLQPTSLLSESLGRSVRLRLTTNAVRTIE 60
Query: 104 KAGGIDEYLLKTPYHKMDTEM 124
K GG+D YLL T K+ ++
Sbjct: 61 KRGGLDAYLLSTANAKLPADL 81
>gi|384262044|ref|YP_005417230.1| 50S ribosomal protein L28 [Rhodospirillum photometricum DSM 122]
gi|378403144|emb|CCG08260.1| 50S ribosomal protein L28 [Rhodospirillum photometricum DSM 122]
Length = 95
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK +Q GN VS KTRR + PN+Q L S + +RV+++TH LR ++
Sbjct: 2 SRRCPVTGKGVQTGNNVSHSN-IKTRRRFLPNLQVNSLMSDKLGEPVRVRLSTHGLRTVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTEM 124
GGID +LL TP ++ ++
Sbjct: 61 HRGGIDAFLLATPTAELTPDL 81
>gi|66773144|ref|NP_001019570.1| 39S ribosomal protein L28, mitochondrial [Danio rerio]
gi|63102137|gb|AAH95131.1| Mitochondrial ribosomal protein L28 [Danio rerio]
Length = 252
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 25/141 (17%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTR--RNWKPNVQEKRLFSYIMDRHIR 91
VP ++ GL+ G+ G R ++D TR + WKP + + L+S I+D+
Sbjct: 65 VPIPIYYPPESQDGLWGGEGWISGFRYAKDDKLSTRLPKTWKPQLFTRELYSEILDQKFS 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKI------------------- 132
V VT+ AL ID A G D Y+LKTP ++++ G+ K +
Sbjct: 125 VTVTSRALDLIDAAFGFDFYILKTPKQDLNSKFGMNLKRAMLLRLARKDTDLYPEDQQRK 184
Query: 133 EKLYEELGQTEVAFFTPEEEA 153
EK+Y+ Q EV PEEEA
Sbjct: 185 EKIYKRYKQFEV----PEEEA 201
>gi|336244191|ref|XP_003343246.1| hypothetical protein SMAC_10369 [Sordaria macrospora k-hell]
Length = 97
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G+ VS NKT+R + PN+Q L S ++R IR++V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGHNVSH-ANNKTKRTFLPNLQNVTLMSEALERSIRLRVSTHGLRSVEHVGGL 65
Query: 109 DEYLLKT 115
D +LLKT
Sbjct: 66 DNWLLKT 72
>gi|297283120|ref|XP_001084527.2| PREDICTED: 39S ribosomal protein L28, mitochondrial isoform 2
[Macaca mulatta]
Length = 284
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G R + D + ++ WKP + E+ L+S I+D+
Sbjct: 93 VPIPIYFPPESQRGLWGGEGWILGQRYANDDKLSKRLKKVWKPQLFERELYSEILDKKFT 152
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G D Y+LKTP + ++ G+
Sbjct: 153 VTVTMRTLDLIDEAYGFDFYILKTPKEDLCSKFGM 187
>gi|346319634|gb|EGX89235.1| 50S ribosomal protein L24 [Cordyceps militaris CM01]
Length = 281
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R + ++ RGL+ I++GN V+ GN+TRR W+PNV K + + I+ ++T
Sbjct: 74 RRLYKQSNRGLYGSARIRYGNIVA-GRGNRTRRTWRPNVHVKAFYVAALGARIKTRLTLR 132
Query: 98 ALRCIDKAGGIDEYLLKT 115
L+ I + GG++ YLLK+
Sbjct: 133 VLKTIRREGGLENYLLKS 150
>gi|383413983|gb|AFH30205.1| 39S ribosomal protein L28, mitochondrial precursor [Macaca mulatta]
gi|384944820|gb|AFI36015.1| 39S ribosomal protein L28, mitochondrial precursor [Macaca mulatta]
Length = 256
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G R + D + ++ WKP + E+ L+S I+D+
Sbjct: 65 VPIPIYFPPESQRGLWGGEGWILGQRYANDDKLSKRLKKVWKPQLFERELYSEILDKKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G D Y+LKTP + ++ G+
Sbjct: 125 VTVTMRTLDLIDEAYGFDFYILKTPKEDLCSKFGM 159
>gi|348526690|ref|XP_003450852.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like
[Oreochromis niloticus]
Length = 251
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 26/150 (17%)
Query: 25 GVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLF 82
G+KE ++ VP ++ GL+ G+ G R + + + R+ WKP V ++ L+
Sbjct: 56 GLKERVQD-VPVPIYYPPESQDGLWGGEGWISGYRYANNDKMSTRLRKTWKPQVFKRELY 114
Query: 83 SYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWK------------- 129
S I+D + VT H L ID A G D Y+LKT +++++G+ K
Sbjct: 115 SEILDHKFIIPVTAHTLDLIDAAYGFDYYILKTQKEDLNSKLGMDLKRAMLLRLARKNTD 174
Query: 130 ------TKIEKLYEELGQTEVAFFTPEEEA 153
K EK+YE+ Q EV PEEEA
Sbjct: 175 LYPNDPVKREKVYEKYKQFEV----PEEEA 200
>gi|380789973|gb|AFE66862.1| 39S ribosomal protein L28, mitochondrial precursor [Macaca mulatta]
Length = 256
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G R + D + ++ WKP + E+ L+S I+D+
Sbjct: 65 VPIPIYFPPESQRGLWGGEGWILGQRYANDDKLSKRLKKVWKPQLFERELYSEILDKKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G D Y+LKTP + ++ G+
Sbjct: 125 VTVTMRTLDLIDEAYGFDFYILKTPKEDLCSKFGM 159
>gi|288957262|ref|YP_003447603.1| 50S ribosomal protein L28 [Azospirillum sp. B510]
gi|374290903|ref|YP_005037938.1| 50S ribosomal protein L28 [Azospirillum lipoferum 4B]
gi|288909570|dbj|BAI71059.1| large subunit ribosomal protein L28 [Azospirillum sp. B510]
gi|357422842|emb|CBS85684.1| 50S ribosomal protein L28 [Azospirillum lipoferum 4B]
Length = 99
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK QFGN VS NK RR ++PN+QE L S + + +R++++ +A+R I+
Sbjct: 2 ARRCSVTGKGTQFGNNVSH-ANNKNRRRFQPNLQETSLLSDSLGQLVRLRLSVNAIRSIE 60
Query: 104 KAGGIDEYLL 113
GG+D +LL
Sbjct: 61 HKGGLDAFLL 70
>gi|260753168|ref|YP_003226061.1| 50S ribosomal protein L28 [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|283856227|ref|YP_162029.2| 50S ribosomal protein L28 [Zymomonas mobilis subsp. mobilis ZM4]
gi|384411772|ref|YP_005621137.1| 50S ribosomal protein L28 [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|397676816|ref|YP_006518354.1| 50S ribosomal protein L28 [Zymomonas mobilis subsp. mobilis ATCC
29191]
gi|48474640|sp|Q9FDL9.1|RL28_ZYMMO RecName: Full=50S ribosomal protein L28
gi|9931340|gb|AAG02150.1|AF212041_6 50S ribosomal protein L28 [Zymomonas mobilis subsp. mobilis ZM4]
gi|258552531|gb|ACV75477.1| ribosomal protein L28 [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|283775222|gb|AAV88918.2| ribosomal protein L28 [Zymomonas mobilis subsp. mobilis ZM4]
gi|335932146|gb|AEH62686.1| ribosomal protein L28 [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|395397505|gb|AFN56832.1| 50S ribosomal protein L28 [Zymomonas mobilis subsp. mobilis ATCC
29191]
Length = 95
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q GN VS N+T+R + PN+Q L S + + + ++V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGNNVSH-ANNRTKRTFLPNLQNVTLISDALGKGVTLRVSTHGLRSVEHVGGL 65
Query: 109 DEYLLKTPYHKMDT 122
D +LLKT K+ T
Sbjct: 66 DNWLLKTKNEKLST 79
>gi|327291037|ref|XP_003230228.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Anolis
carolinensis]
Length = 262
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP +++GL+ G+ G R +++ N+ ++ WKP + + L+S I+DR +
Sbjct: 75 VPVQPYFPPESQQGLWGGEGWVSGFRYAKNDKLSNRVKKIWKPQLFTRELYSEILDRKLI 134
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+ VT L ID A G+D YLLKTP ++ +++G+
Sbjct: 135 ITVTARTLDLIDAAFGLDFYLLKTPKAELCSKLGM 169
>gi|163796313|ref|ZP_02190274.1| LSU ribosomal protein L28P [alpha proteobacterium BAL199]
gi|159178455|gb|EDP62997.1| LSU ribosomal protein L28P [alpha proteobacterium BAL199]
Length = 99
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK + GN VS N+TRR + PN+QE L S ++ + +R+K+ T A+R ++
Sbjct: 2 ARRCELTGKGVLTGNNVSH-ANNRTRRRFLPNIQETALLSDVLGQMVRLKLCTGAIRTVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKL 135
GG+D +L K + E K +IEK+
Sbjct: 61 HNGGLDAFLAKAKVSDLSQE-ARRLKKRIEKV 91
>gi|402221269|gb|EJU01338.1| hypothetical protein DACRYDRAFT_22510 [Dacryopinax sp. DJM-731 SS1]
Length = 129
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 48 LFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGG 107
LF G+ G V +KT+R WKPNV KRLFS + ++V++T LR IDK GG
Sbjct: 21 LFEGRTTLSGYNVPHSK-HKTKRKWKPNVHTKRLFSESLGGTVKVRLTASTLRTIDKYGG 79
Query: 108 IDEYLLK 114
+D Y+L+
Sbjct: 80 LDSYMLR 86
>gi|126335267|ref|XP_001365154.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like
[Monodelphis domestica]
Length = 253
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 30 LKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMD 87
L + VP ++RGL+ G+ G R + + + R+ WKP++ E+ L+S I+D
Sbjct: 61 LVQDVPIPLYFPPESQRGLWGGEGWIRGYRYTNNDKLSKRVRKTWKPHLYERELYSEILD 120
Query: 88 RHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+ + VT L ID+A G D Y+LKTP + ++ G+
Sbjct: 121 KKFKTMVTMRTLDLIDEAYGFDFYILKTPKEDLCSKFGM 159
>gi|83591550|ref|YP_425302.1| 50S ribosomal protein L28 [Rhodospirillum rubrum ATCC 11170]
gi|386348230|ref|YP_006046478.1| 50S ribosomal protein L28 [Rhodospirillum rubrum F11]
gi|123527567|sp|Q2RXY0.1|RL28_RHORT RecName: Full=50S ribosomal protein L28
gi|83574464|gb|ABC21015.1| LSU ribosomal protein L28P [Rhodospirillum rubrum ATCC 11170]
gi|346716666|gb|AEO46681.1| 50S ribosomal protein L28 [Rhodospirillum rubrum F11]
Length = 99
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK +Q GN VS K+RR + PN+Q L S ++ +R++++ H LR ++
Sbjct: 2 SRRCAVTGKGVQTGNNVSHSN-IKSRRRFLPNLQVNSLMSDLLREPVRMRLSAHGLRTVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTEM 124
GGID +LL TP ++ E+
Sbjct: 61 HRGGIDAFLLSTPSVELTVEL 81
>gi|339018846|ref|ZP_08644969.1| LSU ribosomal protein L28P [Acetobacter tropicalis NBRC 101654]
gi|338752060|dbj|GAA08273.1| LSU ribosomal protein L28P [Acetobacter tropicalis NBRC 101654]
Length = 101
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + GN VS NK+RR + PN+QE L S + +R++V+T LR I+
Sbjct: 2 SRRCQITGKGVLTGNNVSH-ANNKSRRRFLPNLQEASLTSETLGTAVRMRVSTRGLRTIE 60
Query: 104 KAGGIDEYLLKTPYHKMDTE 123
GG+D +L TP K+ E
Sbjct: 61 HNGGLDAFLTSTPNRKLPEE 80
>gi|409402535|ref|ZP_11252077.1| 50S ribosomal protein L28 [Acidocella sp. MX-AZ02]
gi|409128892|gb|EKM98769.1| 50S ribosomal protein L28 [Acidocella sp. MX-AZ02]
Length = 99
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK +Q GN VS NK+RR + PN+Q L S + +R++++T A+R I+
Sbjct: 2 ARRCDLTGKTVQAGNNVSH-ANNKSRRRFLPNLQVTTLLSDTLG-AVRLRLSTRAIRTIE 59
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
GG+D +LL K+ TE GL K ++E+
Sbjct: 60 HNGGLDAFLLAHSDAKLTTE-GLALKRRLER 89
>gi|258542744|ref|YP_003188177.1| 50S ribosomal protein L28 [Acetobacter pasteurianus IFO 3283-01]
gi|329114656|ref|ZP_08243415.1| 50S ribosomal protein L28 [Acetobacter pomorum DM001]
gi|384042665|ref|YP_005481409.1| 50S ribosomal protein L28 [Acetobacter pasteurianus IFO 3283-12]
gi|384051182|ref|YP_005478245.1| 50S ribosomal protein L28 [Acetobacter pasteurianus IFO 3283-03]
gi|384054290|ref|YP_005487384.1| 50S ribosomal protein L28 [Acetobacter pasteurianus IFO 3283-07]
gi|384057524|ref|YP_005490191.1| 50S ribosomal protein L28 [Acetobacter pasteurianus IFO 3283-22]
gi|384060165|ref|YP_005499293.1| 50S ribosomal protein L28 [Acetobacter pasteurianus IFO 3283-26]
gi|384063457|ref|YP_005484099.1| 50S ribosomal protein L28 [Acetobacter pasteurianus IFO 3283-32]
gi|384119467|ref|YP_005502091.1| 50S ribosomal protein L28 [Acetobacter pasteurianus IFO
3283-01-42C]
gi|421849582|ref|ZP_16282560.1| LSU ribosomal protein L28P [Acetobacter pasteurianus NBRC 101655]
gi|421853158|ref|ZP_16285837.1| LSU ribosomal protein L28P [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|256633822|dbj|BAH99797.1| LSU ribosomal protein L28P [Acetobacter pasteurianus IFO 3283-01]
gi|256636881|dbj|BAI02850.1| LSU ribosomal protein L28P [Acetobacter pasteurianus IFO 3283-03]
gi|256639934|dbj|BAI05896.1| LSU ribosomal protein L28P [Acetobacter pasteurianus IFO 3283-07]
gi|256642990|dbj|BAI08945.1| LSU ribosomal protein L28P [Acetobacter pasteurianus IFO 3283-22]
gi|256646045|dbj|BAI11993.1| LSU ribosomal protein L28P [Acetobacter pasteurianus IFO 3283-26]
gi|256649098|dbj|BAI15039.1| LSU ribosomal protein L28P [Acetobacter pasteurianus IFO 3283-32]
gi|256652085|dbj|BAI18019.1| LSU ribosomal protein L28P [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655142|dbj|BAI21069.1| LSU ribosomal protein L28P [Acetobacter pasteurianus IFO 3283-12]
gi|326696136|gb|EGE47818.1| 50S ribosomal protein L28 [Acetobacter pomorum DM001]
gi|371459643|dbj|GAB27763.1| LSU ribosomal protein L28P [Acetobacter pasteurianus NBRC 101655]
gi|371478618|dbj|GAB31040.1| LSU ribosomal protein L28P [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 101
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + GN VS NK+RR + PN+Q+ L S + +R++V+ LR I+
Sbjct: 2 SRRCQITGKGVLTGNNVSH-ANNKSRRRFLPNLQDASLVSETLGSAVRMRVSARGLRTIE 60
Query: 104 KAGGIDEYLLKTPYHKMDTE 123
GG+D +LL TP K+ E
Sbjct: 61 HNGGLDAFLLSTPNRKLPEE 80
>gi|158254318|gb|AAI54266.1| Mrpl28 protein [Danio rerio]
Length = 252
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 25/141 (17%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTR--RNWKPNVQEKRLFSYIMDRHIR 91
VP ++ GL+ G+ G R ++D TR + WKP + + L+S I+D+
Sbjct: 65 VPIPVYYPPESQDGLWGGEGWISGFRYAKDDKLSTRLPKTWKPQLFTRELYSEILDQKFS 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKI------------------- 132
V VT+ L ID A G D Y+LKTP ++++ G+ K +
Sbjct: 125 VTVTSRTLDLIDAAFGFDFYILKTPKQDLNSKFGMNLKRAMLLRLACKDTELYPEDQQRR 184
Query: 133 EKLYEELGQTEVAFFTPEEEA 153
EK+Y+ Q EV PEEEA
Sbjct: 185 EKIYKRYKQFEV----PEEEA 201
>gi|406990866|gb|EKE10473.1| 50S ribosomal protein L28 [uncultured bacterium]
Length = 96
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NK+RR + N+QE S + R +R++V+ +R ++K+GG+
Sbjct: 12 ITGKKVMSGNNVSH-ANNKSRRTFAVNLQEASFLSDSLGRPVRLRVSASGIRTVEKSGGL 70
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEK 134
D +L TP K+ T K ++EK
Sbjct: 71 DAFLTSTPNRKL-TSTARLIKRQVEK 95
>gi|332185549|ref|ZP_08387297.1| ribosomal protein L28 [Sphingomonas sp. S17]
gi|332014527|gb|EGI56584.1| ribosomal protein L28 [Sphingomonas sp. S17]
Length = 102
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q GN VS NKT+R + PN+Q L S +++ +R++V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGNNVSH-ANNKTKRTFLPNLQNVTLISDALEKSVRLRVSTHGLRSVEHNGGL 65
Query: 109 DEYLLKTP 116
D +L+KT
Sbjct: 66 DNWLVKTS 73
>gi|432890252|ref|XP_004075439.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Oryzias
latipes]
Length = 251
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Query: 25 GVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLF 82
GVKE ++ VP ++ GL+ G+ G R + + N+ ++ WKP + ++ L+
Sbjct: 56 GVKERVQD-VPIPIYYPPESQDGLWGGEGWVSGFRYANNDKMSNRLKKTWKPQLFKRELY 114
Query: 83 SYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
S I+D + VT L ID A G D Y+LKTP +++++G+
Sbjct: 115 SEILDHKFTITVTPRTLDLIDAAFGFDFYILKTPKEDLNSKLGM 158
>gi|297183663|gb|ADI19788.1| ribosomal protein l28 [uncultured alpha proteobacterium
EB000_37G09]
Length = 116
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 39 IVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHA 98
+VM +KR GK + GN VS N+TRR + PN+Q+ + S I+ R I ++V+T A
Sbjct: 21 VVM--SKRCQITGKGVMSGNNVSH-AKNRTRRRFLPNLQQTSMSSEILGRTISMRVSTSA 77
Query: 99 LRCIDKAGGIDEYLLK 114
+R ++K GG+D +LL+
Sbjct: 78 IRTVEKHGGLDTFLLQ 93
>gi|385301934|gb|EIF46092.1| 54s ribosomal protein mitochondrial [Dekkera bruxellensis AWRI1499]
Length = 172
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 65 GNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEM 124
GN+T R+W PNV KRL+S +++ I++++T+ LR I K GG+D YL K ++ E+
Sbjct: 2 GNRTPRSWLPNVVTKRLWSEALNKTIKIRLTSRVLRTITKEGGLDNYLTKEKSARIK-EL 60
Query: 125 GLY-WKTKIEKL 135
G++ WK + + L
Sbjct: 61 GIFGWKLRYDVL 72
>gi|381166317|ref|ZP_09875533.1| 50S ribosomal protein L28 [Phaeospirillum molischianum DSM 120]
gi|380684537|emb|CCG40345.1| 50S ribosomal protein L28 [Phaeospirillum molischianum DSM 120]
Length = 99
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK + GN VS NK+RR + PN+QE L S +++ +R+++ T+ L+ ++
Sbjct: 2 ARRCAITGKGVLTGNNVSH-ANNKSRRRFLPNLQEVSLLSDALNQTVRLRLCTNGLKTVE 60
Query: 104 KAGGIDEYLLKTPYHKM 120
GGID YLL K+
Sbjct: 61 HNGGIDSYLLSVTDSKL 77
>gi|403273564|ref|XP_003928578.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L28,
mitochondrial, partial [Saimiri boliviensis boliviensis]
Length = 254
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G+R + + K ++ WKP + ++ L+S I+D+
Sbjct: 63 VPIPIYFPRESQRGLWGGEGWIVGHRYANNDKLSKKLKKVWKPQLFDRELYSEILDKKFT 122
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G+D Y+LKTP + ++ G+
Sbjct: 123 VTVTMRTLDLIDEAYGLDFYILKTPKEDLCSKFGM 157
>gi|402907134|ref|XP_003916333.1| PREDICTED: 39S ribosomal protein L28, mitochondrial [Papio anubis]
Length = 256
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G+R + + + ++ WKP + E+ L+S I+D+
Sbjct: 65 VPIPIYFPPESQRGLWGGEGWILGHRYANNDKLSKRLKKVWKPQLFERELYSEILDKKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G D Y+LKTP + ++ G+
Sbjct: 125 VTVTMRTLDLIDEAYGFDFYILKTPKEDLCSKFGM 159
>gi|398831110|ref|ZP_10589289.1| ribosomal protein L28 [Phyllobacterium sp. YR531]
gi|398212678|gb|EJM99280.1| ribosomal protein L28 [Phyllobacterium sp. YR531]
Length = 100
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
K +Q+GN VS N+TRR + PN+ + L S + + R++VT HALR ++ GG+
Sbjct: 7 LTAKSVQYGNNVSH-ANNRTRRRFLPNLCQVTLISEALGQSYRLRVTAHALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +L+K ++ L + +KL E
Sbjct: 66 DAFLVKADEKELSQRARLLKRQIAKKLLE 94
>gi|338707880|ref|YP_004662081.1| 50S ribosomal protein L28 [Zymomonas mobilis subsp. pomaceae ATCC
29192]
gi|336294684|gb|AEI37791.1| ribosomal protein L28 [Zymomonas mobilis subsp. pomaceae ATCC
29192]
Length = 95
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q GN VS N+T+R + PN+Q L S + + ++V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGNNVSH-ANNRTKRTFLPNLQNVTLISDTLGTGVSLRVSTHGLRSVEHVGGL 65
Query: 109 DEYLLKTPYHKMDT 122
D +LLKT K+ T
Sbjct: 66 DNWLLKTKDEKLST 79
>gi|395783766|ref|ZP_10463615.1| 50S ribosomal protein L28 [Bartonella melophagi K-2C]
gi|319409404|emb|CBI83050.1| 50S ribosomal protein L28 [Bartonella schoenbuchensis R1]
gi|395425888|gb|EJF92048.1| 50S ribosomal protein L28 [Bartonella melophagi K-2C]
Length = 97
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS NKTRR + PN+ L S ++ + R++++ HALR ++ GG+
Sbjct: 7 LTGKAVQYGNNVSH-ANNKTRRRFLPNLCNVTLISEVLQQSYRLRISAHALRSVEHRGGL 65
Query: 109 DEYLLKT 115
D +L+K
Sbjct: 66 DCFLVKA 72
>gi|149248730|ref|XP_001528752.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448706|gb|EDK43094.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 283
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 29 SLKKCVPD------SRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLF 82
S+ K VP + M R RGL+ G+ + SE NK R KPN Q +++
Sbjct: 86 SIPKTVPQFPKYKYEALFMKRQNRGLYHGRQRKKSKTCSE-FLNKNLRAHKPNRQVAKIW 144
Query: 83 SYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTK---IEKLYE-E 138
S M R +V+V+T LR + K GG+D+YLLK+ ++ T L WK + + +L E E
Sbjct: 145 SEAMQRQFKVRVSTKFLRTMTKDGGLDQYLLKSTPGRIKTMGLLGWKMRYNLLNRLAELE 204
Query: 139 LGQTEVA 145
GQ +V
Sbjct: 205 RGQAQVG 211
>gi|347736802|ref|ZP_08869351.1| ribosomal protein L28 [Azospirillum amazonense Y2]
gi|346919586|gb|EGY01058.1| ribosomal protein L28 [Azospirillum amazonense Y2]
Length = 92
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +QFGN VS NKTRR + PN+QE L S + +R++++T +R I+ GG+
Sbjct: 1 MTGKGLQFGNNVSH-ANNKTRRRFLPNLQETSLLSDALGTMVRLRLSTKGIRTIEHKGGL 59
Query: 109 DEYLLKTPYHKMDTEMGL 126
D LL D+E+ L
Sbjct: 60 DSALLDMK----DSELSL 73
>gi|359409122|ref|ZP_09201590.1| ribosomal protein L28 [SAR116 cluster alpha proteobacterium
HIMB100]
gi|356675875|gb|EHI48228.1| ribosomal protein L28 [SAR116 cluster alpha proteobacterium
HIMB100]
Length = 94
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
+KR GK + GN VS N+TRR + PN+Q + S I+ R + ++V+ +A+R I+
Sbjct: 2 SKRCQITGKGVMSGNNVSH-ANNRTRRKFLPNLQRTSMSSEILGRDVTLRVSVNAIRTIE 60
Query: 104 KAGGIDEYLLK 114
K GG+D +LL+
Sbjct: 61 KHGGLDAFLLQ 71
>gi|452820396|gb|EME27439.1| ribosomal protein L28 family protein isoform 2 [Galdieria
sulphuraria]
gi|452820397|gb|EME27440.1| ribosomal protein L28 family protein isoform 1 [Galdieria
sulphuraria]
Length = 144
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
+ R RGLF G+ +FG + + G K RR+++PN+ L+S D+ +++ A+
Sbjct: 12 LCKRRGRGLFDGEMTKFGEKAAPSG-QKHRRSFRPNIHRLSLYSKTFDKWFFFRISQSAM 70
Query: 100 RCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEELGQTEVA 145
+ + + GG+DEYL++TP + + K +I + EL +E
Sbjct: 71 KKVKEWGGLDEYLVRTPDEVILYPFAIRLKYEILRKRAELQSSETG 116
>gi|344925174|ref|ZP_08778635.1| ribosomal protein L28 [Candidatus Odyssella thessalonicensis L13]
Length = 96
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R + K + GN VS NKTRR + PN+Q L S + R + ++++T+A+R I+
Sbjct: 2 ARRCAISKKGVLSGNNVSH-ANNKTRRRFLPNLQNVSLMSEALGRAVSMRLSTNAIRTIE 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMG 125
GG+D YLLK +D ++
Sbjct: 61 HHGGLDAYLLKVSSVNLDPKVA 82
>gi|387017092|gb|AFJ50664.1| 39S ribosomal protein L28, mitochondrial-like [Crotalus adamanteus]
Length = 246
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
++ GL+ G+ G R + D + ++ WKP + + +S I+D+ +R+ VT L
Sbjct: 77 SQEGLWGGEGWVEGYRYAHDDKLSRRLKKVWKPQIFNREFYSEILDKKLRIAVTMSTLEQ 136
Query: 102 IDKAGGIDEYLLKTPYHKMDTEMGL 126
IDKA G D Y+LKTP ++ +++G+
Sbjct: 137 IDKAFGFDFYILKTPKSELCSKLGM 161
>gi|448124591|ref|XP_004204961.1| Piso0_000250 [Millerozyma farinosa CBS 7064]
gi|358249594|emb|CCE72660.1| Piso0_000250 [Millerozyma farinosa CBS 7064]
Length = 268
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 31 KKCVPD---SRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMD 87
KK PD + R RGL+ G SE G NK R KPN+ + +L+S ++
Sbjct: 76 KKQFPDYEYETMFFKRQNRGLYGGLQRTASKSCSESG-NKNLRTHKPNIVKTKLWSETLN 134
Query: 88 RHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKL 135
+ I+ +V+T L+ + K GG+D YL K ++ T L WK + E L
Sbjct: 135 KAIQTRVSTRVLKTVTKEGGLDNYLTKDKPARIKTMGLLGWKLRYEIL 182
>gi|348585397|ref|XP_003478458.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Cavia
porcellus]
Length = 254
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP +++GL+ G+ G R + + N+ ++ WKP + ++ L+S I+D+
Sbjct: 63 VPIPIYYPPESQKGLWGGEGWILGYRYANNDKLSNRVKKVWKPQLFQRELYSEILDKKFT 122
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G D Y+LKTP + ++ G+
Sbjct: 123 VTVTMRTLDLIDEAYGFDFYILKTPKEDLCSKFGM 157
>gi|326385791|ref|ZP_08207420.1| ribosomal protein L28 [Novosphingobium nitrogenifigens DSM 19370]
gi|326209770|gb|EGD60558.1| ribosomal protein L28 [Novosphingobium nitrogenifigens DSM 19370]
Length = 95
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G+ VS NKT+R + PN+Q L S +DR R +V+TH LR ++ GG+
Sbjct: 7 LTGKGRQIGHNVSH-ANNKTKRVFLPNLQNVTLLSEKLDRSFRFRVSTHGLRSVEHNGGL 65
Query: 109 DEYLLKTPYHKMDTEM 124
D +LLK DTE+
Sbjct: 66 DNWLLKAR----DTEL 77
>gi|144898657|emb|CAM75521.1| 50S ribosomal protein L28 [Magnetospirillum gryphiswaldense MSR-1]
Length = 100
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK + GN VS NK+RR + PN+QE + S + + +R+KV+T L+ I+
Sbjct: 2 ARRCSITGKGVLTGNNVSH-ANNKSRRRFLPNLQETSVLSDALGQMVRLKVSTRGLKTIE 60
Query: 104 KAGGIDEYLLKTPYHKMDTE 123
GG+D +LL T ++ E
Sbjct: 61 HNGGLDAFLLGTNDSRLPDE 80
>gi|395785167|ref|ZP_10464900.1| 50S ribosomal protein L28 [Bartonella tamiae Th239]
gi|423717933|ref|ZP_17692123.1| 50S ribosomal protein L28 [Bartonella tamiae Th307]
gi|395425354|gb|EJF91523.1| 50S ribosomal protein L28 [Bartonella tamiae Th239]
gi|395426366|gb|EJF92493.1| 50S ribosomal protein L28 [Bartonella tamiae Th307]
Length = 97
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS NKTRR + PN+ L S +++ R++++ HALR ++ GG+
Sbjct: 7 LTGKSVQYGNNVSH-ANNKTRRRFLPNLCNVTLISETLEQSYRLRISAHALRSVEHRGGL 65
Query: 109 DEYLLK 114
D +L K
Sbjct: 66 DAFLAK 71
>gi|154252158|ref|YP_001412982.1| 50S ribosomal protein L28 [Parvibaculum lavamentivorans DS-1]
gi|171769596|sp|A7HTU2.1|RL28_PARL1 RecName: Full=50S ribosomal protein L28
gi|154156108|gb|ABS63325.1| ribosomal protein L28 [Parvibaculum lavamentivorans DS-1]
Length = 96
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R +GK + GN VS KTRR + PN+ + L S + R ++V+ HALR ++
Sbjct: 2 SRRCELSGKAVMSGNNVSH-ANRKTRRRFLPNLCQVTLISDALGRQFSLRVSAHALRSVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKL 135
GG+D +LLK ++ + L K IEK+
Sbjct: 61 HNGGLDPFLLKASDAQLSSR-ALKLKRAIEKV 91
>gi|395515616|ref|XP_003761997.1| PREDICTED: 39S ribosomal protein L28, mitochondrial [Sarcophilus
harrisii]
Length = 253
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 30 LKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMD 87
L + VP +++GL+ G+ G R + + + ++ WKP++ E+ L+S I+D
Sbjct: 61 LVQDVPIPLYFPPESQKGLWGGEGWISGYRYANNDKLSRRVKKTWKPHLYERELYSEILD 120
Query: 88 RHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+ + VT L ID+A G D Y+LKTP + ++ G+
Sbjct: 121 KKFKAMVTMRTLDLIDEAYGFDFYILKTPKEDLCSKFGM 159
>gi|114706269|ref|ZP_01439171.1| 50S ribosomal protein L28 [Fulvimarina pelagi HTCC2506]
gi|114538130|gb|EAU41252.1| 50S ribosomal protein L28 [Fulvimarina pelagi HTCC2506]
Length = 100
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKTRR + PN+ L S + + R+KV+ HALR ++ GG+
Sbjct: 7 LTGKGVMSGNNVSH-ANNKTRRRFLPNLCSVTLISDALGQRYRLKVSAHALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +LLK+ +++ L + +KL E
Sbjct: 66 DAFLLKSHENELSQRARLLKRQIAKKLAE 94
>gi|68469645|ref|XP_721074.1| likely mitochondrial ribosomal protein (E. coli L28) [Candida
albicans SC5314]
gi|68469884|ref|XP_720952.1| likely mitochondrial ribosomal protein (E. coli L28) [Candida
albicans SC5314]
gi|46442846|gb|EAL02132.1| likely mitochondrial ribosomal protein (E. coli L28) [Candida
albicans SC5314]
gi|46442975|gb|EAL02260.1| likely mitochondrial ribosomal protein (E. coli L28) [Candida
albicans SC5314]
Length = 265
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
R RGL+ G + SE NKT R +PN Q +L+S ++R +R++V T L
Sbjct: 83 FFKRQNRGLYGGLQRKRSKSCSE-YLNKTLRAHRPNAQWTKLWSETLNRRLRLRVATRVL 141
Query: 100 RCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+ I K GG+D+YLLK+ ++ T MGL
Sbjct: 142 KTISKEGGLDQYLLKSTPARVKT-MGL 167
>gi|448122250|ref|XP_004204403.1| Piso0_000250 [Millerozyma farinosa CBS 7064]
gi|358349942|emb|CCE73221.1| Piso0_000250 [Millerozyma farinosa CBS 7064]
Length = 268
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 31 KKCVPDSR---IVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMD 87
KK PD + R RGL+ G SE G NK R KPN+ + +L+S ++
Sbjct: 76 KKQFPDYEYEAMFFKRQNRGLYGGLQRTASKSCSESG-NKNLRTHKPNIVKTKLWSETLN 134
Query: 88 RHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKL 135
+ I+ +V+T L+ + K GG+D YL K ++ T L WK + E L
Sbjct: 135 KAIQTRVSTRVLKTVTKEGGLDNYLTKDKPARIKTMGLLGWKLRYEIL 182
>gi|430005360|emb|CCF21161.1| 50S ribosomal protein L28 [Rhizobium sp.]
Length = 99
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q GN VS NKTRR + PN+ L S + + R++V+ HALR ++ GG+
Sbjct: 7 LTGKGVQTGNNVSH-ANNKTRRRFLPNLCHVTLISDALGQRFRLRVSAHALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +LLK +++ L + +K E
Sbjct: 66 DAFLLKADENELSMRARLLRRQIAKKTAE 94
>gi|383641779|ref|ZP_09954185.1| 50S ribosomal protein L28 [Sphingomonas elodea ATCC 31461]
Length = 99
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G+ VS NKT+R + PN+Q L S + + IR++V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGHNVSH-ANNKTKRTFLPNLQNVTLISDSLGKSIRLRVSTHGLRSVEHVGGL 65
Query: 109 DEYLLKT 115
D +LLK+
Sbjct: 66 DNWLLKS 72
>gi|110635403|ref|YP_675611.1| 50S ribosomal protein L28 [Chelativorans sp. BNC1]
gi|122965640|sp|Q11DS9.1|RL28_MESSB RecName: Full=50S ribosomal protein L28
gi|110286387|gb|ABG64446.1| LSU ribosomal protein L28P [Chelativorans sp. BNC1]
Length = 98
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKTRR + PN+ + L S + + R++V+ +ALR ++ GG+
Sbjct: 7 LTGKAVMSGNNVSH-ANNKTRRRFLPNLCDVTLMSEALGQSYRLRVSANALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
D +LLK +++ L K +KL E+
Sbjct: 66 DAFLLKAKSNELSQRARLLKKQVAKKLTEQ 95
>gi|341613340|ref|ZP_08700209.1| 50S ribosomal protein L28 [Citromicrobium sp. JLT1363]
Length = 97
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q GN VS NKT+R + PN+Q L S +DR + +V+T LR ++ GG+
Sbjct: 7 LTGKGRQVGNNVSH-ANNKTKRVFLPNLQNVTLLSEKLDRSFKFRVSTQGLRSVEHNGGL 65
Query: 109 DEYLLKTPYHKMD 121
D +LLKT K+
Sbjct: 66 DNWLLKTKDEKLS 78
>gi|238882178|gb|EEQ45816.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 265
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 40 VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
R RGL+ G + SE NKT R +PN Q +L+S ++R +R++V T L
Sbjct: 83 FFKRQNRGLYGGLQRKRSKSCSE-YLNKTLRAHRPNAQWTKLWSETLNRRLRLRVATRVL 141
Query: 100 RCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+ I K GG+D+YLLK+ ++ T MGL
Sbjct: 142 KTISKEGGLDQYLLKSTPARVKT-MGL 167
>gi|426401049|ref|YP_007020021.1| 50S ribosomal protein L28 [Candidatus Endolissoclinum patella L2]
gi|425857717|gb|AFX98753.1| Ribosomal protein L28 [Candidatus Endolissoclinum patella L2]
Length = 97
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
+R GK + GN VS N+TRR + PN+Q+K L S I+ IRVK+ T LR ++
Sbjct: 2 TRRCNLTGKGVLTGNNVSH-ANNRTRRRFLPNIQQKFLLSDILGSMIRVKLATATLRTVE 60
Query: 104 KAGGIDEYLLKT 115
GG+D +L T
Sbjct: 61 HCGGLDNFLKNT 72
>gi|47225028|emb|CAF97443.1| unnamed protein product [Tetraodon nigroviridis]
Length = 251
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 14 RKVGGEKNLAP--GVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTR-- 69
R +G + + P G KE ++ VP +++ GL+ G+ G R + + TR
Sbjct: 43 RPLGVQHRVNPKTGQKERVQD-VPIPIYYPPQSQDGLWGGEGWISGYRYANNDKMSTRLK 101
Query: 70 RNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+ WKP + ++ L+S I+D + VT L ID A G D Y+LKTP +++++G+
Sbjct: 102 KTWKPQLFKRELYSEILDHKFTITVTARTLDLIDAAYGFDFYILKTPKEDLNSKLGM 158
>gi|13473066|ref|NP_104633.1| 50S ribosomal protein L28 [Mesorhizobium loti MAFF303099]
gi|337266091|ref|YP_004610146.1| 50S ribosomal protein L28 [Mesorhizobium opportunistum WSM2075]
gi|433772958|ref|YP_007303425.1| ribosomal protein L28 [Mesorhizobium australicum WSM2073]
gi|20139637|sp|Q98FZ7.1|RL28_RHILO RecName: Full=50S ribosomal protein L28
gi|14023814|dbj|BAB50419.1| 50S ribosomal protein L28 [Mesorhizobium loti MAFF303099]
gi|336026401|gb|AEH86052.1| ribosomal protein L28 [Mesorhizobium opportunistum WSM2075]
gi|433664973|gb|AGB44049.1| ribosomal protein L28 [Mesorhizobium australicum WSM2073]
Length = 98
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
K +Q GN VS NKT+R + PN+ L S +++++R++++ +ALR ++ GG+
Sbjct: 7 LTAKAVQTGNNVSH-ANNKTKRRFLPNLVNVTLISEALNQNVRLRISANALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEELG 140
D +L K ++ L K +KL E++
Sbjct: 66 DAFLAKADVKELSQRARLLKKQIAKKLAEQVA 97
>gi|378731636|gb|EHY58095.1| hypothetical protein HMPREF1120_06113 [Exophiala dermatitidis
NIH/UT8656]
Length = 300
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
A GL+ G +Q GN++S+ G NK T R W PNV+ + L S +D+ +++ VT R
Sbjct: 75 ANFGLYGGATLQSGNKISK-GRNKGKTLRKWFPNVRIETLRSEALDKELKIPVTARVRRT 133
Query: 102 IDKAGGIDEYLLKTPYHKMDTEMGLY-WKTK 131
I+K GG+D+Y+ T ++ E+GL WK +
Sbjct: 134 IEKCGGLDQYVTGTKPARIK-ELGLLGWKLR 163
>gi|229366872|gb|ACQ58416.1| 39S ribosomal protein L28, mitochondrial precursor [Anoplopoma
fimbria]
Length = 252
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 21 NLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQE 78
N G KE ++ VP +++ GL+ G+ G R + + N+ ++ WKP + +
Sbjct: 52 NPTTGQKERVQD-VPIPIYYPPQSQDGLWGGEGWISGFRYANNDKMSNRLKKTWKPQLFK 110
Query: 79 KRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+ L+S I+D + VT L ID A G D Y+L+TP +++++G+
Sbjct: 111 RELYSEILDHKFTITVTPRTLNLIDAAFGFDFYILRTPREDLNSKLGM 158
>gi|347529774|ref|YP_004836522.1| 50S ribosomal protein L28 [Sphingobium sp. SYK-6]
gi|345138456|dbj|BAK68065.1| 50S ribosomal protein L28 [Sphingobium sp. SYK-6]
Length = 97
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G+ Q G+ VS NKT+R + PN+Q L S ++R ++++V+TH LR ++ GG+
Sbjct: 7 LTGRSRQVGHNVSH-ANNKTKRVFLPNLQNVTLISDTLERGVKLRVSTHGLRSVEHVGGL 65
Query: 109 DEYLLKTPYHKMD 121
D +L+KT K+
Sbjct: 66 DNWLMKTSDEKLS 78
>gi|149185198|ref|ZP_01863515.1| ribosomal protein L28 [Erythrobacter sp. SD-21]
gi|148831309|gb|EDL49743.1| ribosomal protein L28 [Erythrobacter sp. SD-21]
Length = 95
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q GN VS NKT+R + PN+Q L S +DR + +V+T LR ++ GG+
Sbjct: 7 LTGKGRQVGNNVSH-ANNKTKRVFLPNLQNVTLMSEKLDRSFKFRVSTQGLRSVEHNGGL 65
Query: 109 DEYLLKTPYHKMD 121
D +L+KT K+
Sbjct: 66 DNWLMKTSDEKLS 78
>gi|260942223|ref|XP_002615410.1| hypothetical protein CLUG_04292 [Clavispora lusitaniae ATCC 42720]
gi|238850700|gb|EEQ40164.1| hypothetical protein CLUG_04292 [Clavispora lusitaniae ATCC 42720]
Length = 263
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 6/122 (4%)
Query: 16 VGGEKNLAPGVKESLKKCVPD---SRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNW 72
VGG++ + +KK P+ + R RGL+AG + SE GNK R
Sbjct: 60 VGGQEMPYNKIIPRVKKLYPEYEYETMFFKRQNRGLYAGLQRKRSKTCSE-SGNKNNRVH 118
Query: 73 KPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL-YWKTK 131
PN+ +L+S +++ I +V+T LR + K GG+D YLLK ++ T MGL W+ K
Sbjct: 119 LPNIVRAKLWSETLNKRISARVSTTLLRTVTKEGGLDNYLLKDKPARVKT-MGLKAWRLK 177
Query: 132 IE 133
+
Sbjct: 178 YD 179
>gi|319899448|ref|YP_004159545.1| 50S ribosomal protein L28 [Bartonella clarridgeiae 73]
gi|319403416|emb|CBI76984.1| 50S ribosomal protein L28 [Bartonella clarridgeiae 73]
Length = 97
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS NKTRR + PN+ L S ++ + R++++ +ALR ++ GG+
Sbjct: 7 LTGKAVQYGNNVSH-ANNKTRRRFLPNLCNVTLISEVLQQSYRLRISANALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEELG 140
D +L+K ++ L + I+K E++
Sbjct: 66 DGFLVKADDKELSQRARLLKRQIIKKKAEQVA 97
>gi|426380535|ref|XP_004056918.1| PREDICTED: 39S ribosomal protein L28, mitochondrial [Gorilla
gorilla gorilla]
Length = 256
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G + + + ++ WKP + E+ L+S I+D+
Sbjct: 65 VPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFERELYSEILDKKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G+D Y+LKTP + ++ G+
Sbjct: 125 VTVTMRTLDLIDEAYGLDFYILKTPKEDLCSKFGM 159
>gi|384417425|ref|YP_005626785.1| 50S ribosomal protein L28 [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353460339|gb|AEQ94618.1| ribosomal protein L28 [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 103
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 37 SRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTT 96
SR VM+R + +GK +Q GN VS N+TRR + PN+ E+R + +R ++++V+
Sbjct: 22 SRCVMSRVCQ--VSGKRVQTGNNVSH-ANNRTRRRFLPNLHERRFWVASENRWVKLRVSA 78
Query: 97 HALRCIDKAGGIDEYL 112
HALR IDK GID L
Sbjct: 79 HALRTIDK-NGIDAVL 93
>gi|402820776|ref|ZP_10870340.1| rpmB protein [alpha proteobacterium IMCC14465]
gi|402510422|gb|EJW20687.1| rpmB protein [alpha proteobacterium IMCC14465]
Length = 95
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKTRR + PN+Q+ L S + + +R +++ HALR ++ GGI
Sbjct: 7 LTGKAVMSGNNVSH-AVNKTRRKFLPNLQQVSLPSEKLGKALRFRISAHALRTVEHVGGI 65
Query: 109 DEYLLK 114
D +L+K
Sbjct: 66 DAFLVK 71
>gi|311251699|ref|XP_003124744.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Sus
scrofa]
Length = 256
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 47 GLFAGKHIQFGNR-VSEDGGNK-TRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDK 104
GL+ G+ G+R V+ D +K R+ WKP + ++ L+S I+D+ V VT L ID+
Sbjct: 78 GLWGGEGWVLGHRYVNNDKLSKRVRKVWKPQLFQRELYSEILDKRFTVTVTMRTLDLIDQ 137
Query: 105 AGGIDEYLLKTPYHKMDTEMGL 126
A G D Y+LKTP + ++ G+
Sbjct: 138 ACGFDFYILKTPKEDLCSKFGM 159
>gi|397476104|ref|XP_003809451.1| PREDICTED: 39S ribosomal protein L28, mitochondrial isoform 1 [Pan
paniscus]
gi|397476106|ref|XP_003809452.1| PREDICTED: 39S ribosomal protein L28, mitochondrial isoform 2 [Pan
paniscus]
Length = 256
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G + + + ++ WKP + E+ L+S I+D+
Sbjct: 65 VPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFERELYSEILDKKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G+D Y+LKTP + ++ G+
Sbjct: 125 VTVTMRTLDLIDEAYGLDFYILKTPKEDLCSKFGM 159
>gi|354478687|ref|XP_003501546.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like
[Cricetulus griseus]
gi|344248259|gb|EGW04363.1| 39S ribosomal protein L28, mitochondrial [Cricetulus griseus]
Length = 257
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTR--RNWKPNVQEKRLFSYIMDRHIR 91
VP +++GL+ G+ + G R + + TR + WKP + + L+S I+D+
Sbjct: 65 VPIPIYYPPESQQGLWGGEGVILGYRYANNDKLSTRVKKVWKPQLFTRELYSEILDKKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G D Y+LKTP + ++ G+
Sbjct: 125 VTVTMRTLDLIDEAYGFDFYILKTPKEDLCSKFGM 159
>gi|226822870|gb|ACO83102.1| mitochondrial ribosomal protein L28 (predicted) [Dasypus
novemcinctus]
Length = 256
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNR-VSEDGGNK-TRRNWKPNVQEKRLFSYIMDRHIR 91
VP A+ GL+ G+ G+R V+ D +K ++ W+P + ++ L+S I+DR
Sbjct: 65 VPIPIYYPPEAQLGLWGGEGWILGHRYVNNDKFSKRVKKIWRPQLFQRELYSEILDRKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G D Y+LKTP + ++ G+
Sbjct: 125 VTVTMRTLDLIDEAFGFDFYILKTPQEDLCSKFGM 159
>gi|57239262|ref|YP_180398.1| 50S ribosomal protein L28 [Ehrlichia ruminantium str. Welgevonden]
gi|58579225|ref|YP_197437.1| 50S ribosomal protein L28 [Ehrlichia ruminantium str. Welgevonden]
gi|81557296|sp|Q5HAZ6.1|RL28_EHRRW RecName: Full=50S ribosomal protein L28
gi|57161341|emb|CAH58264.1| 50S ribosomal protein L28 [Ehrlichia ruminantium str. Welgevonden]
gi|58417851|emb|CAI27055.1| 50S ribosomal protein L28 [Ehrlichia ruminantium str. Welgevonden]
Length = 100
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G+ FGN+VS KT+R + N+ LFS +++R R K+++ LR ID GG+
Sbjct: 7 ITGQTKSFGNKVSH-SNRKTKRTYLVNLHNVTLFSDVLNRKFRFKISSRTLRTIDYKGGL 65
Query: 109 DEYLLKTPYHKM 120
D YLL+T K+
Sbjct: 66 DLYLLETSSRKL 77
>gi|410209286|gb|JAA01862.1| mitochondrial ribosomal protein L28 [Pan troglodytes]
gi|410248854|gb|JAA12394.1| mitochondrial ribosomal protein L28 [Pan troglodytes]
gi|410308462|gb|JAA32831.1| mitochondrial ribosomal protein L28 [Pan troglodytes]
Length = 256
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G + + + ++ WKP + E+ L+S I+D+
Sbjct: 65 VPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFERELYSEILDKKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G+D Y+LKTP + ++ G+
Sbjct: 125 VTVTMRTLDLIDEAYGLDFYILKTPKEDLCSKFGM 159
>gi|332239948|ref|XP_003269153.1| PREDICTED: 39S ribosomal protein L28, mitochondrial [Nomascus
leucogenys]
Length = 256
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G + + + ++ WKP + E+ L+S I+D+
Sbjct: 65 VPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFERELYSEILDKKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G+D Y+LKTP + ++ G+
Sbjct: 125 VTVTMRTLDLIDEAYGLDFYILKTPKEDLCSKFGM 159
>gi|103488227|ref|YP_617788.1| 50S ribosomal protein L28 [Sphingopyxis alaskensis RB2256]
gi|123379514|sp|Q1GPG7.1|RL28_SPHAL RecName: Full=50S ribosomal protein L28
gi|98978304|gb|ABF54455.1| LSU ribosomal protein L28P [Sphingopyxis alaskensis RB2256]
Length = 97
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G+ VS NKT+R + PN+Q L S + + ++++V+TH LR ++ GG+
Sbjct: 7 LTGKGRQIGHNVSH-ANNKTKRTFLPNLQNVTLLSDALGKSVKLRVSTHGLRSVEHNGGL 65
Query: 109 DEYLLKT 115
D +L+KT
Sbjct: 66 DNWLMKT 72
>gi|241951236|ref|XP_002418340.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Candida
dubliniensis CD36]
gi|223641679|emb|CAX43640.1| ribosomal protein, large subunit, mitochondrial precursor, putative
[Candida dubliniensis CD36]
Length = 270
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 41 MNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALR 100
R RGL+ G + SE NKT R +PNVQ +L+S +++ +R++V T L+
Sbjct: 89 FKRQNRGLYGGLQRKRSKSCSE-YLNKTLRVHRPNVQWTKLWSETLNKRLRLRVATRVLK 147
Query: 101 CIDKAGGIDEYLLKTPYHKMDTEMGL 126
I K GG+D+YLLK+ ++ T MGL
Sbjct: 148 TISKEGGLDQYLLKSTPARVKT-MGL 172
>gi|407768603|ref|ZP_11115981.1| 50S ribosomal protein L28 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288287|gb|EKF13765.1| 50S ribosomal protein L28 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 121
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R +GK + G VS N+T+R + PN+Q L S + R +R+++TT+A+R I+
Sbjct: 2 ARRCPVSGKGVLVGMNVSH-AHNRTKRRFLPNLQPASLLSEALGRSVRLRLTTNAVRTIE 60
Query: 104 KAGGIDEYL 112
K GG+D YL
Sbjct: 61 KRGGLDAYL 69
>gi|153008253|ref|YP_001369468.1| 50S ribosomal protein L28 [Ochrobactrum anthropi ATCC 49188]
gi|404316648|ref|ZP_10964581.1| 50S ribosomal protein L28 [Ochrobactrum anthropi CTS-325]
gi|166226592|sp|A6WXD5.1|RL28_OCHA4 RecName: Full=50S ribosomal protein L28
gi|151560141|gb|ABS13639.1| ribosomal protein L28 [Ochrobactrum anthropi ATCC 49188]
Length = 99
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS NKTRR + PN+ L S + + R++V+ +ALR ++ GG+
Sbjct: 7 LTGKSVQYGNNVSH-ANNKTRRRFLPNLCNVTLMSETLGQSYRLRVSANALRSVEHRGGL 65
Query: 109 DEYLLKT 115
D +L+K+
Sbjct: 66 DAFLVKS 72
>gi|357975742|ref|ZP_09139713.1| 50S ribosomal protein L28 [Sphingomonas sp. KC8]
Length = 94
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G+ VS NKT+R + PN+Q L S + ++++V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGHNVSH-ANNKTKRTFLPNLQNVTLMSDALGESVKLRVSTHGLRSVEHVGGL 65
Query: 109 DEYLLKTPYHKM 120
D +LLKT K+
Sbjct: 66 DNWLLKTNDDKL 77
>gi|444309318|ref|ZP_21144957.1| 50S ribosomal protein L28 [Ochrobactrum intermedium M86]
gi|443487376|gb|ELT50139.1| 50S ribosomal protein L28 [Ochrobactrum intermedium M86]
Length = 98
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS NKTRR + PN+ L S + + R++V+ +ALR ++ GG+
Sbjct: 7 LTGKSVQYGNNVSH-ANNKTRRRFLPNLCNVTLMSETLGQSYRLRVSANALRSVEHRGGL 65
Query: 109 DEYLLKT 115
D +L+K+
Sbjct: 66 DAFLVKS 72
>gi|402825775|ref|ZP_10875033.1| 50S ribosomal protein L28 [Sphingomonas sp. LH128]
gi|402260680|gb|EJU10785.1| 50S ribosomal protein L28 [Sphingomonas sp. LH128]
Length = 94
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G VS NKT+R + PN+Q L S +DR + +V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGCNVSH-ANNKTKRVFLPNLQNVTLMSEGLDRSFKFRVSTHGLRSVEHNGGL 65
Query: 109 DEYLLKTPYHKM 120
D +LLKT K+
Sbjct: 66 DNWLLKTSDAKL 77
>gi|90420223|ref|ZP_01228131.1| 50S ribosomal protein L28 [Aurantimonas manganoxydans SI85-9A1]
gi|90335557|gb|EAS49307.1| 50S ribosomal protein L28 [Aurantimonas manganoxydans SI85-9A1]
Length = 98
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q GN VS N+TRR + PN+ + L S M + R++++ HALR ++ GG+
Sbjct: 7 LTGKAVQSGNNVSH-ANNRTRRKFLPNLCQVTLISDAMGQRYRLRISAHALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +L K ++ L + +K+ E
Sbjct: 66 DAFLAKADAAELSQRARLLKRQIAKKIAE 94
>gi|319404842|emb|CBI78443.1| 50S ribosomal protein L28 [Bartonella rochalimae ATCC BAA-1498]
Length = 95
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS NKTRR + PN+ L S ++ + R++++ +ALR ++ GG+
Sbjct: 7 LTGKAVQYGNNVSH-ANNKTRRRFLPNLCNVTLISELLQQSYRLRISANALRSVEHRGGL 65
Query: 109 DEYLLK 114
D +L+K
Sbjct: 66 DNFLIK 71
>gi|340515557|gb|EGR45810.1| hypothetical protein TRIREDRAFT_80854 [Trichoderma reesei QM6a]
Length = 290
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRL-FSYIMDRHIRVKVTT 96
R + ++ GL+ I+FGN V+ NK+RR W+PNV K + ++ ++T
Sbjct: 89 RRIYKQSNAGLYGSARIRFGNNVAPKHNNKSRRFWRPNVHVKAFPMPSLGGARVKTRLTL 148
Query: 97 HALRCIDKAGGIDEYLLKT 115
L+ I + GGI+ YLLK+
Sbjct: 149 RVLKTIRREGGIENYLLKS 167
>gi|350536953|ref|NP_001232505.1| putative mitochondrial ribosomal protein L28 variant 1 [Taeniopygia
guttata]
gi|197128495|gb|ACH44993.1| putative mitochondrial ribosomal protein L28 variant 1 [Taeniopygia
guttata]
gi|197128498|gb|ACH44996.1| putative mitochondrial ribosomal protein L28 variant 1 [Taeniopygia
guttata]
Length = 248
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTR--RNWKPNVQEKRLFSYIMDRHIR 91
VP A GL+ G+ G R + D TR + WKP + +++ +S I+D +
Sbjct: 65 VPVPVYFPPAANEGLWGGEGWVRGFRYARDDXLSTRLPKTWKPQLFKRQFYSEILDATLT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+ VT L ID A G D Y+LKTP M +++G+
Sbjct: 125 ITVTMRTLDLIDAAFGFDFYILKTPRADMCSKLGM 159
>gi|389736429|ref|ZP_10189982.1| 50S ribosomal protein L28 [Rhodanobacter sp. 115]
gi|388439369|gb|EIL95947.1| 50S ribosomal protein L28 [Rhodanobacter sp. 115]
Length = 78
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK +Q GN VS NKTRR W PN+ E+R + +R I+++V+ HALR IDK G
Sbjct: 7 VTGKGVQTGNNVSH-ANNKTRRRWLPNLHERRFWVASENRWIKLRVSNHALRTIDKKG 63
>gi|148555241|ref|YP_001262823.1| 50S ribosomal protein L28 [Sphingomonas wittichii RW1]
gi|166228155|sp|A5V8R9.1|RL28_SPHWW RecName: Full=50S ribosomal protein L28
gi|148500431|gb|ABQ68685.1| LSU ribosomal protein L28P [Sphingomonas wittichii RW1]
Length = 97
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G+ VS NKT+R + PN+Q L S + + ++++V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGHNVSH-ANNKTKRTFLPNLQNVTLISDSLGKGVKLRVSTHGLRSVEHVGGL 65
Query: 109 DEYLLKTP 116
D +LLKT
Sbjct: 66 DNWLLKTS 73
>gi|355756404|gb|EHH60012.1| hypothetical protein EGM_11274, partial [Macaca fascicularis]
Length = 195
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G R + D + ++ WKP + E+ L+S I+D+
Sbjct: 4 VPIPIYFPPESQRGLWGGEGWILGQRYANDDKLSKRLKKVWKPQLFERELYSEILDKKFT 63
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G D Y+LK + ++ G+
Sbjct: 64 VTVTMRTLDLIDEAYGFDFYILKASGEDLCSKFGM 98
>gi|49474767|ref|YP_032809.1| 50S ribosomal protein L28 [Bartonella quintana str. Toulouse]
gi|403531065|ref|YP_006665594.1| 50S ribosomal protein L28 [Bartonella quintana RM-11]
gi|67461402|sp|Q6FYG6.1|RL28_BARQU RecName: Full=50S ribosomal protein L28
gi|49240271|emb|CAF26742.1| 50s ribosomal protein l28 [Bartonella quintana str. Toulouse]
gi|403233136|gb|AFR26879.1| 50S ribosomal protein L28 [Bartonella quintana RM-11]
Length = 97
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS NKTRR + PN+ L S ++ + R++V+ ALR ++ GG+
Sbjct: 7 LTGKTVQYGNNVSH-ANNKTRRRFLPNLCNVTLISEVLQQSYRLRVSASALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
D +L++ ++ L + ++K E+
Sbjct: 66 DSFLVRADDKELSQRARLLKRQIVKKKAEQ 95
>gi|390471002|ref|XP_003734408.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L28,
mitochondrial [Callithrix jacchus]
Length = 256
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G R + + + ++ WKP + ++ L+S I+D+
Sbjct: 65 VPIPIYFPRESQRGLWGGEGWIQGQRYANNDKLSKRLKKVWKPQLFDRELYSEILDKKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G D Y+LKTP + ++ G+
Sbjct: 125 VTVTMRTLDLIDEAYGFDFYILKTPKEDLCSKFGM 159
>gi|357023828|ref|ZP_09085996.1| 50S ribosomal protein L28 [Mesorhizobium amorphae CCNWGS0123]
gi|355544261|gb|EHH13369.1| 50S ribosomal protein L28 [Mesorhizobium amorphae CCNWGS0123]
Length = 98
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
K + GN VS NKT+R + PN+ L S ++++++R++V+ +ALR ++ GG+
Sbjct: 7 LTAKAVMTGNNVSH-ANNKTKRRFLPNLVNVTLISEVLNQNVRLRVSANALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
D +L K ++ L K +KL E+
Sbjct: 66 DAFLAKADAKELSQRARLLKKQITKKLAEQ 95
>gi|239833067|ref|ZP_04681396.1| ribosomal protein L28 [Ochrobactrum intermedium LMG 3301]
gi|239825334|gb|EEQ96902.1| ribosomal protein L28 [Ochrobactrum intermedium LMG 3301]
Length = 118
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS NKTRR + PN+ L S + + R++V+ +ALR ++ GG+
Sbjct: 27 LTGKSVQYGNNVSH-ANNKTRRRFLPNLCNVTLMSETLGQSYRLRVSANALRSVEHRGGL 85
Query: 109 DEYLLKT 115
D +L+K+
Sbjct: 86 DAFLVKS 92
>gi|56758908|gb|AAW27594.1| SJCHGC01033 protein [Schistosoma japonicum]
gi|226482518|emb|CAX73858.1| 39S ribosomal protein L28, mitochondrial precursor [Schistosoma
japonicum]
gi|226482520|emb|CAX73859.1| 39S ribosomal protein L28, mitochondrial precursor [Schistosoma
japonicum]
Length = 260
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 15/156 (9%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
P + I +++ L+ G+ I G ++ K + W+P + E +S I+DR + +
Sbjct: 59 TPLNIIYPPESQKCLWGGEGIIQGYWEKKNQRPKFPKAWRPVLMENLFYSEILDRWMVII 118
Query: 94 VTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYW---------KTKIEKLYEELGQTEV 144
V+ AL+ I+ AGG D Y+L TP K+ + +G++ K+K + + + Q
Sbjct: 119 VSDSALKQIENAGGFDFYILSTPQSKLKSRLGMHLKRDMLVTLAKSKKDGMMKSNWQKYS 178
Query: 145 AFFTPEEEAK-----LEQDF-KDMKLAQRAARRELR 174
F P EEA+ LE+ K MK+ +R +R
Sbjct: 179 GFIIPLEEAEWIGLTLEEAVKKQMKIEYEISRSRIR 214
>gi|197128497|gb|ACH44995.1| putative mitochondrial ribosomal protein L28 variant 2 [Taeniopygia
guttata]
Length = 248
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTR--RNWKPNVQEKRLFSYIMDRHIR 91
VP A GL+ G+ G R + D TR + WKP + +++ +S I+D +
Sbjct: 65 VPVPVYFPPAANEGLWGGEGWVRGFRYARDDKLSTRLPKTWKPQLFKRQFYSEILDATLT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+ VT L ID A G D Y+LKTP M +++G+
Sbjct: 125 ITVTMRTLDLIDAAFGFDFYILKTPRADMCSKLGM 159
>gi|389876176|ref|YP_006369741.1| 50S ribosomal protein L28 [Tistrella mobilis KA081020-065]
gi|388526960|gb|AFK52157.1| ribosomal protein L28 [Tistrella mobilis KA081020-065]
Length = 103
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK GN VS NK+RR + PNVQ+ ++S ++ R +R+KV LR I+
Sbjct: 2 ARRCELTGKRYMAGNNVSH-AHNKSRRRFNPNVQDTGIYSDVLGRLVRLKVAVSTLRSIE 60
Query: 104 KAGGIDEYL 112
+ GG+D +L
Sbjct: 61 RRGGLDAFL 69
>gi|395791745|ref|ZP_10471201.1| 50S ribosomal protein L28 [Bartonella alsatica IBS 382]
gi|395408048|gb|EJF74668.1| 50S ribosomal protein L28 [Bartonella alsatica IBS 382]
Length = 95
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + +GN VS NKTRR + PN+ L S ++ ++ R++V+ ALR ++ GG+
Sbjct: 7 LTGKTVLYGNNVSH-ANNKTRRRFLPNLCNVTLISEVLQQNFRLRVSASALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEK 134
D +LLK K+ L + ++K
Sbjct: 66 DGFLLKADDKKLSQRARLLKRQIVKK 91
>gi|357385949|ref|YP_004900673.1| 50S ribosomal protein L28 [Pelagibacterium halotolerans B2]
gi|351594586|gb|AEQ52923.1| LSU ribosomal protein L28p [Pelagibacterium halotolerans B2]
Length = 94
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK + GN VS N+TRR + PN+ + L S +DR ++++V+ ALR ++
Sbjct: 2 ARRCELTGKGVMTGNNVSH-ALNRTRRRFLPNLCDVTLISEALDRSVKLRVSASALRTVE 60
Query: 104 KAGGIDEYLLK 114
GG+D +L+K
Sbjct: 61 HRGGLDAFLMK 71
>gi|197128496|gb|ACH44994.1| putative mitochondrial ribosomal protein L28 variant 1 [Taeniopygia
guttata]
Length = 248
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTR--RNWKPNVQEKRLFSYIMDRHIR 91
VP A GL+ G+ G R + D TR + WKP + +++ +S I+D +
Sbjct: 65 VPVPVYFPPAANEGLWGGEGWVRGFRYARDDKLSTRLPKTWKPQLFKRQFYSEILDATLT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+ VT L ID A G D Y+LKTP M +++G+
Sbjct: 125 ITVTMRTLDLIDAAFGFDFYILKTPRADMCSKLGM 159
>gi|121602432|ref|YP_988415.1| 50S ribosomal protein L28 [Bartonella bacilliformis KC583]
gi|421760235|ref|ZP_16197054.1| 50S ribosomal protein L28 [Bartonella bacilliformis INS]
gi|166226544|sp|A1UR12.1|RL28_BARBK RecName: Full=50S ribosomal protein L28
gi|120614609|gb|ABM45210.1| ribosomal protein L28 [Bartonella bacilliformis KC583]
gi|411175952|gb|EKS45973.1| 50S ribosomal protein L28 [Bartonella bacilliformis INS]
Length = 98
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS NKTRR + PN+ L S +M + R++++ +A+R ++ GG+
Sbjct: 7 LTGKTVQYGNNVSH-ANNKTRRRFLPNLCNVTLISEVMQQSYRLRISANAVRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
D +L K ++ L + ++K E+
Sbjct: 66 DNFLTKADDKELSQRARLLKRQIVKKKAEQ 95
>gi|395767653|ref|ZP_10448186.1| 50S ribosomal protein L28 [Bartonella doshiae NCTC 12862]
gi|395414016|gb|EJF80469.1| 50S ribosomal protein L28 [Bartonella doshiae NCTC 12862]
Length = 101
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS NKTRR + PN+ L S ++ + R++++ +ALR ++ GG+
Sbjct: 7 LTGKTVQYGNNVSH-ANNKTRRRFLPNLCNVTLISEVLQQSYRLRISANALRSVEHRGGL 65
Query: 109 DEYLLK 114
D +L+K
Sbjct: 66 DGFLVK 71
>gi|319407804|emb|CBI81455.1| 50S ribosomal protein L28 [Bartonella sp. 1-1C]
Length = 97
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS NKTRR + PN+ L S ++ + R++++ +ALR ++ GG+
Sbjct: 7 LTGKAVQYGNNVSH-ANNKTRRRFLPNLCNVTLISELLQQSYRLRISANALRSVEHRGGL 65
Query: 109 DEYLLK 114
D +L+K
Sbjct: 66 DNFLVK 71
>gi|334346394|ref|YP_004554946.1| 50S ribosomal protein L28 [Sphingobium chlorophenolicum L-1]
gi|334103016|gb|AEG50440.1| 50S ribosomal protein L28 [Sphingobium chlorophenolicum L-1]
Length = 97
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G+ VS NKT+R + PN+Q L S ++ ++++V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGHNVSH-ANNKTKRVFLPNLQNVSLISEALETTVKLRVSTHGLRSVEHNGGL 65
Query: 109 DEYLLKTPYHKMD 121
D +LLKT K+
Sbjct: 66 DNWLLKTSDEKLS 78
>gi|395780572|ref|ZP_10461034.1| 50S ribosomal protein L28 [Bartonella washoensis 085-0475]
gi|423711830|ref|ZP_17686135.1| 50S ribosomal protein L28 [Bartonella washoensis Sb944nv]
gi|395412678|gb|EJF79158.1| 50S ribosomal protein L28 [Bartonella washoensis Sb944nv]
gi|395418918|gb|EJF85235.1| 50S ribosomal protein L28 [Bartonella washoensis 085-0475]
Length = 97
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS NKTRR + PN+ L S ++ + R++V+ ALR ++ GG+
Sbjct: 7 LTGKTVQYGNNVSH-ANNKTRRRFLPNLCNVTLISEVLQQSYRLRVSASALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
D +L+K ++ L + ++K E+
Sbjct: 66 DGFLVKADDKELSQRARLLKRQIVKKKAEQ 95
>gi|148261685|ref|YP_001235812.1| 50S ribosomal protein L28 [Acidiphilium cryptum JF-5]
gi|326405178|ref|YP_004285260.1| 50S ribosomal protein L28 [Acidiphilium multivorum AIU301]
gi|338986499|ref|ZP_08633532.1| RpmB [Acidiphilium sp. PM]
gi|166226532|sp|A5G211.1|RL28_ACICJ RecName: Full=50S ribosomal protein L28
gi|146403366|gb|ABQ31893.1| LSU ribosomal protein L28P [Acidiphilium cryptum JF-5]
gi|325052040|dbj|BAJ82378.1| 50S ribosomal protein L28 [Acidiphilium multivorum AIU301]
gi|338206588|gb|EGO94691.1| RpmB [Acidiphilium sp. PM]
Length = 100
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 45 KRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDK 104
+R GK + GN VS NK+RR + PN+Q+ L S + ++++VT L I++
Sbjct: 3 RRCDITGKSVLSGNNVSH-ANNKSRRRFLPNLQDSALQSDALGHSVKLRVTPRGLATIEQ 61
Query: 105 AGGIDEYLLKTPYHKMDTE 123
GG+D +LL TP K+ E
Sbjct: 62 KGGLDAFLLDTPNRKLTDE 80
>gi|344292262|ref|XP_003417847.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Loxodonta
africana]
Length = 256
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 44 AKRGLFAGKHIQFGNRV--SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
++ GL+ G+ G+R S + ++ WKP + ++ L+S I+D+ V VT L
Sbjct: 75 SQLGLWGGEGWIMGHRYVSSHKRSKRVKKVWKPQLFQRELYSEILDKKFSVTVTMRTLDL 134
Query: 102 IDKAGGIDEYLLKTPYHKMDTEMGL 126
IDKA G D Y+LKTP + ++ G+
Sbjct: 135 IDKAYGFDFYILKTPKEDLCSKFGM 159
>gi|265983010|ref|ZP_06095745.1| LSU ribosomal protein L28P [Brucella sp. 83/13]
gi|306837624|ref|ZP_07470495.1| ribosomal protein L28 [Brucella sp. NF 2653]
gi|306842858|ref|ZP_07475496.1| ribosomal protein L28 [Brucella sp. BO2]
gi|306843444|ref|ZP_07476045.1| ribosomal protein L28 [Brucella inopinata BO1]
gi|264661602|gb|EEZ31863.1| LSU ribosomal protein L28P [Brucella sp. 83/13]
gi|306276135|gb|EFM57835.1| ribosomal protein L28 [Brucella inopinata BO1]
gi|306286980|gb|EFM58495.1| ribosomal protein L28 [Brucella sp. BO2]
gi|306407331|gb|EFM63539.1| ribosomal protein L28 [Brucella sp. NF 2653]
Length = 97
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS NKTRR + PN+ L S + + R++++ +ALR ++ GG+
Sbjct: 7 LTGKSVQYGNNVSH-ANNKTRRRFLPNLCNVTLISETLGQSYRLRISANALRSVEHRGGL 65
Query: 109 DEYLLKT 115
D +L+K+
Sbjct: 66 DAFLVKS 72
>gi|49476246|ref|YP_034287.1| 50S ribosomal protein L28 [Bartonella henselae str. Houston-1]
gi|67461407|sp|Q6G5T1.1|RL28_BARHE RecName: Full=50S ribosomal protein L28
gi|49239054|emb|CAF28355.1| 50S ribosomal protein l28 [Bartonella henselae str. Houston-1]
Length = 97
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS NKTRR + PN+ L S ++ + R++V+ ALR ++ GG+
Sbjct: 7 LTGKTVQYGNNVSH-ANNKTRRRFLPNLCNVTLISEVLQQSYRLRVSASALRSVEHRGGL 65
Query: 109 DEYLLK 114
D +L+K
Sbjct: 66 DGFLVK 71
>gi|88607418|ref|YP_504966.1| 50S ribosomal protein L28 [Anaplasma phagocytophilum HZ]
gi|123495525|sp|Q2GKY5.1|RL28_ANAPZ RecName: Full=50S ribosomal protein L28
gi|88598481|gb|ABD43951.1| ribosomal protein L28 [Anaplasma phagocytophilum HZ]
Length = 103
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G FGN+VS KT+R++ N+ L S ++ R RVKV + LR ID GG+
Sbjct: 7 ITGASKSFGNKVSHSN-RKTKRSYLVNLHNVTLVSEVLGRKFRVKVASRTLRTIDYKGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIE 133
D YLL T K+ TE+ K KI+
Sbjct: 66 DLYLLNTSSRKL-TEVARKIKRKIK 89
>gi|58617277|ref|YP_196476.1| 50S ribosomal protein L28 [Ehrlichia ruminantium str. Gardel]
gi|75432681|sp|Q5FFP1.1|RL28_EHRRG RecName: Full=50S ribosomal protein L28
gi|58416889|emb|CAI28002.1| 50S ribosomal protein L28 [Ehrlichia ruminantium str. Gardel]
Length = 100
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
G+ FGN+VS KT+R + N+ LFS +++R R K+++ LR ID GG D
Sbjct: 8 TGQTKSFGNKVSH-SNRKTKRTYLVNLHNVTLFSDVLNRKFRFKISSRTLRTIDYKGGFD 66
Query: 110 EYLLKTPYHKM 120
YLL+T K+
Sbjct: 67 LYLLETSSRKL 77
>gi|294012907|ref|YP_003546367.1| ribosomal protein L28 [Sphingobium japonicum UT26S]
gi|390168703|ref|ZP_10220658.1| 50S ribosomal protein L28 [Sphingobium indicum B90A]
gi|292676237|dbj|BAI97755.1| ribosomal protein L28 [Sphingobium japonicum UT26S]
gi|389588659|gb|EIM66699.1| 50S ribosomal protein L28 [Sphingobium indicum B90A]
Length = 97
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G+ VS NKT+R + PN+Q L S ++ ++++V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGHNVSH-ANNKTKRVFLPNLQNVSLISEALETTVKLRVSTHGLRSVEHNGGL 65
Query: 109 DEYLLKTPYHKM 120
D +LLKT K+
Sbjct: 66 DNWLLKTSDDKL 77
>gi|398385904|ref|ZP_10543920.1| ribosomal protein L28 [Sphingobium sp. AP49]
gi|397719720|gb|EJK80286.1| ribosomal protein L28 [Sphingobium sp. AP49]
Length = 97
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G+ VS NKT+R + PN+Q L S ++ ++++V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGHNVSH-ANNKTKRVFLPNLQNVSLISETLETSVKLRVSTHGLRSVEHNGGL 65
Query: 109 DEYLLKTPYHKM 120
D +L+KT K+
Sbjct: 66 DNWLVKTSDDKL 77
>gi|400601621|gb|EJP69264.1| ribosomal L28 family protein [Beauveria bassiana ARSEF 2860]
Length = 282
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R + ++ RGL+ I++GN V+ GNKTR W+PNV K + I+ ++T
Sbjct: 75 RRLYKQSNRGLYGSARIRYGNIVA-GRGNKTRTFWRPNVHVKIFHVAALGARIKTRLTLR 133
Query: 98 ALRCIDKAGGIDEYLLKT 115
L+ I + GG++ YLLK+
Sbjct: 134 VLKSIRREGGLENYLLKS 151
>gi|240851331|ref|YP_002972734.1| 50S ribosomal protein L28 [Bartonella grahamii as4aup]
gi|240268454|gb|ACS52042.1| 50S ribosomal protein L28 [Bartonella grahamii as4aup]
Length = 105
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + +GN VS NKTRR + PN+ L S ++ + R++++ ALR ++ GG+
Sbjct: 7 LTGKTVLYGNNVSH-ANNKTRRRFLPNLCNVTLISEVLQQSYRLRISASALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEELGQ 141
D +L+K ++ L + I+K E+ G+
Sbjct: 66 DAFLVKADDKELSQRARLLKRQIIKKKAEQEGE 98
>gi|37514850|gb|AAH00990.2| Mitochondrial ribosomal protein L28 [Homo sapiens]
gi|189054796|dbj|BAG37621.1| unnamed protein product [Homo sapiens]
gi|312150214|gb|ADQ31619.1| mitochondrial ribosomal protein L28 [synthetic construct]
Length = 256
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G + + + ++ WKP + E+ +S I+D+
Sbjct: 65 VPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G+D Y+LKTP + ++ G+
Sbjct: 125 VTVTMRTLDLIDEAYGLDFYILKTPKEDLCSKFGM 159
>gi|285016930|ref|YP_003374641.1| 50S ribosomal protein L28 [Xanthomonas albilineans GPE PC73]
gi|380512086|ref|ZP_09855493.1| 50S ribosomal protein L28 [Xanthomonas sacchari NCPPB 4393]
gi|283472148|emb|CBA14655.1| probable 50s ribosomal subunit protein l28 [Xanthomonas albilineans
GPE PC73]
Length = 78
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
+GK +Q GN VS NKTRR + PN+ E+R + +R +++KV+ HALR IDK GID
Sbjct: 8 SGKRVQTGNNVSH-ANNKTRRRFLPNLHERRFWVASENRWVKLKVSAHALRTIDK-NGID 65
Query: 110 EYL 112
L
Sbjct: 66 TVL 68
>gi|51873998|gb|AAH80753.1| Mrpl28 protein, partial [Mus musculus]
Length = 258
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
+++GL+ G+ + G R + + + ++ WKP + + L+S I+D+ V VT L
Sbjct: 76 SQQGLWGGEGLILGYRYANNDKLSKRVKKVWKPQLFTRELYSEILDKKFTVTVTMRTLDL 135
Query: 102 IDKAGGIDEYLLKTPYHKMDTEMGL 126
ID+A G D Y+LKTP + ++ G+
Sbjct: 136 IDEAYGFDFYILKTPKEDLGSKFGM 160
>gi|26324321|dbj|BAB22962.2| unnamed protein product [Mus musculus]
Length = 270
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
+++GL+ G+ + G R + + + ++ WKP + + L+S I+D+ V VT L
Sbjct: 88 SQQGLWGGEGLILGYRYANNDKLSKRVKKVWKPQLFTRELYSEILDKKFTVTVTMRTLDL 147
Query: 102 IDKAGGIDEYLLKTPYHKMDTEMGL 126
ID+A G D Y+LKTP + ++ G+
Sbjct: 148 IDEAYGFDFYILKTPKEDLGSKFGM 172
>gi|26787989|ref|NP_077189.2| 39S ribosomal protein L28, mitochondrial [Mus musculus]
gi|85695427|sp|Q9D1B9.3|RM28_MOUSE RecName: Full=39S ribosomal protein L28, mitochondrial;
Short=L28mt; Short=MRP-L28; Flags: Precursor
gi|74190253|dbj|BAE37227.1| unnamed protein product [Mus musculus]
gi|148690541|gb|EDL22488.1| mitochondrial ribosomal protein L28 [Mus musculus]
gi|148877513|gb|AAI45681.1| Mitochondrial ribosomal protein L28 [Mus musculus]
gi|148877515|gb|AAI45683.1| Mitochondrial ribosomal protein L28 [Mus musculus]
Length = 257
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
+++GL+ G+ + G R + + + ++ WKP + + L+S I+D+ V VT L
Sbjct: 75 SQQGLWGGEGLILGYRYANNDKLSKRVKKVWKPQLFTRELYSEILDKKFTVTVTMRTLDL 134
Query: 102 IDKAGGIDEYLLKTPYHKMDTEMGL 126
ID+A G D Y+LKTP + ++ G+
Sbjct: 135 IDEAYGFDFYILKTPKEDLGSKFGM 159
>gi|119606236|gb|EAW85830.1| mitochondrial ribosomal protein L28, isoform CRA_c [Homo sapiens]
Length = 287
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G + + + ++ WKP + E+ +S I+D+
Sbjct: 96 VPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFT 155
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G+D Y+LKTP + ++ G+
Sbjct: 156 VTVTMRTLDLIDEAYGLDFYILKTPKEDLCSKFGM 190
>gi|52632406|gb|AAH02293.2| Mitochondrial ribosomal protein L28 [Mus musculus]
Length = 267
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
+++GL+ G+ + G R + + + ++ WKP + + L+S I+D+ V VT L
Sbjct: 85 SQQGLWGGEGLILGYRYANNDKLSKRVKKVWKPQLFTRELYSEILDKKFTVTVTMRTLDL 144
Query: 102 IDKAGGIDEYLLKTPYHKMDTEMGL 126
ID+A G D Y+LKTP + ++ G+
Sbjct: 145 IDEAYGFDFYILKTPKEDLGSKFGM 169
>gi|52790424|gb|AAH05797.2| Mrpl28 protein, partial [Mus musculus]
gi|72679514|gb|AAI00323.1| Mrpl28 protein, partial [Mus musculus]
Length = 267
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
+++GL+ G+ + G R + + + ++ WKP + + L+S I+D+ V VT L
Sbjct: 85 SQQGLWGGEGLILGYRYANNDKLSKRVKKVWKPQLFTRELYSEILDKKFTVTVTMRTLDL 144
Query: 102 IDKAGGIDEYLLKTPYHKMDTEMGL 126
ID+A G D Y+LKTP + ++ G+
Sbjct: 145 IDEAYGFDFYILKTPKEDLGSKFGM 169
>gi|87198247|ref|YP_495504.1| 50S ribosomal protein L28 [Novosphingobium aromaticivorans DSM
12444]
gi|123491021|sp|Q2GBV3.1|RL28_NOVAD RecName: Full=50S ribosomal protein L28
gi|87133928|gb|ABD24670.1| LSU ribosomal protein L28P [Novosphingobium aromaticivorans DSM
12444]
Length = 94
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G+ VS NKT+R + PN+Q L S +DR + +V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGHNVSH-ANNKTKRLFLPNLQNVTLLSEKLDRSFKFRVSTHGLRSVEHNGGL 65
Query: 109 DEYLLKTPYHKMD 121
D +LLK K+
Sbjct: 66 DNWLLKQSDTKLS 78
>gi|381200382|ref|ZP_09907522.1| 50S ribosomal protein L28 [Sphingobium yanoikuyae XLDN2-5]
gi|427410401|ref|ZP_18900603.1| 50S ribosomal protein L28 [Sphingobium yanoikuyae ATCC 51230]
gi|425712534|gb|EKU75549.1| 50S ribosomal protein L28 [Sphingobium yanoikuyae ATCC 51230]
Length = 97
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G+ VS NKT+R + PN+Q L S ++ ++++V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGHNVSH-ANNKTKRVFLPNLQNVSLISETLETTVKLRVSTHGLRSVEHNGGL 65
Query: 109 DEYLLKTPYHKM 120
D +L+KT K+
Sbjct: 66 DNWLVKTSDDKL 77
>gi|304394146|ref|ZP_07376069.1| 50S ribosomal protein L28 [Ahrensia sp. R2A130]
gi|303293586|gb|EFL87963.1| 50S ribosomal protein L28 [Ahrensia sp. R2A130]
Length = 96
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKTRR + PN+ L S +++ +R+++ ALR ++ GG+
Sbjct: 7 LTGKAVMTGNNVSH-ANNKTRRRFLPNLVNVTLLSEALEKGVRMRIAASALRTVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +L+K + + L K +KL E
Sbjct: 66 DAFLMKEKEVNLSPKAALIRKEVAKKLAE 94
>gi|328541960|ref|YP_004302069.1| 50S ribosomal protein L28 [Polymorphum gilvum SL003B-26A1]
gi|326411710|gb|ADZ68773.1| 50S ribosomal protein L28 [Polymorphum gilvum SL003B-26A1]
Length = 96
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK + GN VS NKTRR + PN+ L S + +++++ HALR ++
Sbjct: 2 ARRCELTGKDVMSGNNVSH-ANNKTRRRFLPNLCNVSLISDALGETYKLRISAHALRSVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMG 125
GG+D +LLK DTE+
Sbjct: 61 HRGGLDAFLLKAS----DTELS 78
>gi|26051229|ref|NP_006419.2| 39S ribosomal protein L28, mitochondrial [Homo sapiens]
gi|85695426|sp|Q13084.4|RM28_HUMAN RecName: Full=39S ribosomal protein L28, mitochondrial;
Short=L28mt; Short=MRP-L28; AltName: Full=Melanoma
antigen p15; AltName: Full=Melanoma-associated antigen
recognized by T-lymphocytes; Flags: Precursor
gi|38197174|gb|AAH00507.2| Mitochondrial ribosomal protein L28 [Homo sapiens]
gi|119606233|gb|EAW85827.1| mitochondrial ribosomal protein L28, isoform CRA_a [Homo sapiens]
gi|119606235|gb|EAW85829.1| mitochondrial ribosomal protein L28, isoform CRA_a [Homo sapiens]
gi|119606238|gb|EAW85832.1| mitochondrial ribosomal protein L28, isoform CRA_a [Homo sapiens]
gi|119606240|gb|EAW85834.1| mitochondrial ribosomal protein L28, isoform CRA_a [Homo sapiens]
Length = 256
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G + + + ++ WKP + E+ +S I+D+
Sbjct: 65 VPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G+D Y+LKTP + ++ G+
Sbjct: 125 VTVTMRTLDLIDEAYGLDFYILKTPKEDLCSKFGM 159
>gi|420238795|ref|ZP_14743170.1| ribosomal protein L28 [Rhizobium sp. CF080]
gi|398084641|gb|EJL75317.1| ribosomal protein L28 [Rhizobium sp. CF080]
Length = 99
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKTRR + PN+ + L S + + R++V+ HALR ++ GG+
Sbjct: 7 LTGKGVLTGNNVSH-ANNKTRRRFLPNLCQVTLISDALGQRYRLRVSAHALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +LLK ++ L + ++K E
Sbjct: 66 DAFLLKADETELSMRARLLRRQIVKKTAE 94
>gi|159045123|ref|YP_001533917.1| 50S ribosomal protein L28 [Dinoroseobacter shibae DFL 12]
gi|189029438|sp|A8LHY2.1|RL28_DINSH RecName: Full=50S ribosomal protein L28
gi|157912883|gb|ABV94316.1| 50S ribosomal protein L28 [Dinoroseobacter shibae DFL 12]
Length = 95
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK +Q GN VS NKT+R + PN+ + L S + R +++++ ALR +D
Sbjct: 2 SRRCELTGKGVQVGNNVSH-ANNKTKRRFLPNLNDVTLMSETLGRGFKLRISAAALRTVD 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
GG+D +L K ++ +E L K I K
Sbjct: 61 HRGGLDSFLAKAKDAEL-SEKALKIKKDIAK 90
>gi|85375365|ref|YP_459427.1| 50S ribosomal protein L28 [Erythrobacter litoralis HTCC2594]
gi|122543434|sp|Q2N6R1.1|RL28_ERYLH RecName: Full=50S ribosomal protein L28
gi|84788448|gb|ABC64630.1| ribosomal protein L28 [Erythrobacter litoralis HTCC2594]
Length = 99
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G+ VS NKT+R + PN+Q L S +DR + +V+T LR ++ GG+
Sbjct: 7 LTGKGRQVGHNVSH-ANNKTKRVFLPNLQNVTLLSEKLDRGFKFRVSTQGLRSVEHNGGL 65
Query: 109 DEYLLKTPYHKMDTE 123
D +LLKT K+ +
Sbjct: 66 DNWLLKTKDDKLSSN 80
>gi|225706482|gb|ACO09087.1| 39S ribosomal protein L28, mitochondrial precursor [Osmerus mordax]
Length = 253
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 5/125 (4%)
Query: 6 KEMMKKLVRKVGGEKNLAP--GVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSED 63
+E M R +G ++P G+KE ++ +P +++GL+ G+ G + +++
Sbjct: 36 REPMPVHWRPLGVNYKVSPKSGLKERVQD-IPIPIYYPAESQKGLWGGEGWISGFKYAKN 94
Query: 64 GGNKTR--RNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 121
R + WKP + + L+S I+D + VT L ID A G D Y+LKTP ++
Sbjct: 95 DKLCPRLAKTWKPQLFNRELYSEILDHKFTITVTARVLDLIDAAYGFDFYILKTPKEDLN 154
Query: 122 TEMGL 126
+++G+
Sbjct: 155 SKLGM 159
>gi|395788966|ref|ZP_10468496.1| 50S ribosomal protein L28 [Bartonella taylorii 8TBB]
gi|395431100|gb|EJF97127.1| 50S ribosomal protein L28 [Bartonella taylorii 8TBB]
Length = 101
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + +GN VS NKTRR + PN+ L S ++ + R++V+ ALR ++ GG+
Sbjct: 7 LTGKTVLYGNNVSH-ANNKTRRRFLPNLCNVTLISEVLQQSYRLRVSASALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
D++L+K ++ L + ++K E+
Sbjct: 66 DDFLVKADDKELSQRARLLKRQIVKKKAEQ 95
>gi|83949729|ref|ZP_00958462.1| ribosomal protein L28 [Roseovarius nubinhibens ISM]
gi|83837628|gb|EAP76924.1| ribosomal protein L28 [Roseovarius nubinhibens ISM]
Length = 96
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN S NKTRR + PN+ + L S + R I+++++ HALR +D
Sbjct: 2 SRRCELTGKGPMVGNN-SSHANNKTRRRYLPNLNDVTLQSETLSRGIKLRISAHALRSVD 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
GG+D +L K ++ T L K +I K
Sbjct: 61 HRGGLDAFLAKAKDSELST-TALKVKKEIAK 90
>gi|355709793|gb|EHH31257.1| hypothetical protein EGK_12285, partial [Macaca mulatta]
Length = 243
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G R + D + ++ WKP + E+ L+S I+D+
Sbjct: 52 VPIPIYFPPESQRGLWGGEGWILGQRYANDDKLSKRLKKVWKPQLFERELYSEILDKKFT 111
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G D Y+LK + ++ G+
Sbjct: 112 VTVTMRTLDLIDEAYGFDFYILKASGEDLCSKFGM 146
>gi|355704327|gb|AES02190.1| mitochondrial ribosomal protein L28 [Mustela putorius furo]
Length = 254
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNR-VSEDGGNK-TRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++ GL+ G+ G R V+ D +K ++ WKP + ++ L+S I+DR
Sbjct: 65 VPIPIYYPPESQLGLWGGEGWILGYRYVNNDKLSKRVKKVWKPQLFQRELYSEILDRRFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G D Y+LKTP + ++ G+
Sbjct: 125 VTVTRRTLDLIDEAYGFDFYILKTPKEDLCSKFGM 159
>gi|384917885|ref|ZP_10017986.1| 50S ribosomal protein L28 [Citreicella sp. 357]
gi|384468189|gb|EIE52633.1| 50S ribosomal protein L28 [Citreicella sp. 357]
Length = 96
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 6/93 (6%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+ + L S + R I+++++ HALR +D GG+
Sbjct: 7 LTGKGPMTGNNVSH-ANNKTKRRFLPNLNDVSLQSETLGRAIKMRISAHALRSVDHRGGL 65
Query: 109 DEYLLKTPYHKMDTEM-GLYWKTKIEKLYEELG 140
D++L K DTE+ K K E L +L
Sbjct: 66 DKFLAKAK----DTELSAAALKVKKEILKAQLA 94
>gi|296282926|ref|ZP_06860924.1| 50S ribosomal protein L28 [Citromicrobium bathyomarinum JL354]
Length = 96
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G+ VS NKT+R + PN+Q L S +DR + +V+T LR ++ GG+
Sbjct: 7 LTGKGRQVGHNVSH-ANNKTKRVFLPNLQNVTLMSEKLDRSFKFRVSTQGLRSVEHNGGL 65
Query: 109 DEYLLKTPYHKMD 121
D +LLKT K+
Sbjct: 66 DNWLLKTKDEKLS 78
>gi|50546210|ref|XP_500626.1| YALI0B08074p [Yarrowia lipolytica]
gi|49646492|emb|CAG82867.1| YALI0B08074p [Yarrowia lipolytica CLIB122]
Length = 299
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 39 IVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHA 98
V R R LF G+ + G R SE NKT R WKPN Q+ L S + +++R+
Sbjct: 80 FVFKRGDRALFGGRTLGNGYRSSEFR-NKTLRKWKPNAQKTTLPSEALGKNVRITTVPRV 138
Query: 99 LRCIDKAGGIDEYLLK-TP 116
L I + GG+D YL K TP
Sbjct: 139 LSTIRREGGLDAYLTKDTP 157
>gi|389794250|ref|ZP_10197408.1| 50S ribosomal protein L28 [Rhodanobacter fulvus Jip2]
gi|388432775|gb|EIL89764.1| 50S ribosomal protein L28 [Rhodanobacter fulvus Jip2]
Length = 78
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK +Q GN VS NKTRR W PN+ E+R + +R I+++V+ HALR IDK G
Sbjct: 7 VTGKGVQSGNNVSH-ANNKTRRRWLPNLHERRFWVPGENRWIKLRVSNHALRTIDKNG 63
>gi|149202032|ref|ZP_01879005.1| 50S ribosomal protein L28 [Roseovarius sp. TM1035]
gi|149144130|gb|EDM32161.1| 50S ribosomal protein L28 [Roseovarius sp. TM1035]
Length = 96
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN S NKTRR + PN+ + L S ++R I+++++ HALR +D
Sbjct: 2 SRRCELTGKGPMVGNN-SSHANNKTRRRYLPNLNDVTLQSETLNRGIKLRISAHALRSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +L K
Sbjct: 61 HRGGLDAFLAK 71
>gi|190576385|ref|YP_001974230.1| 50S ribosomal protein L28 [Stenotrophomonas maltophilia K279a]
gi|194367723|ref|YP_002030333.1| 50S ribosomal protein L28 [Stenotrophomonas maltophilia R551-3]
gi|344209393|ref|YP_004794534.1| 50S ribosomal protein L28 [Stenotrophomonas maltophilia JV3]
gi|408822595|ref|ZP_11207485.1| 50S ribosomal protein L28 [Pseudomonas geniculata N1]
gi|424670768|ref|ZP_18107791.1| 50S ribosomal protein L28 [Stenotrophomonas maltophilia Ab55555]
gi|226699168|sp|B4SNN0.1|RL28_STRM5 RecName: Full=50S ribosomal protein L28
gi|226699169|sp|B2FNE3.1|RL28_STRMK RecName: Full=50S ribosomal protein L28
gi|190014307|emb|CAQ47954.1| putative 50S ribosomal protein L28 [Stenotrophomonas maltophilia
K279a]
gi|194350527|gb|ACF53650.1| ribosomal protein L28 [Stenotrophomonas maltophilia R551-3]
gi|343780755|gb|AEM53308.1| 50S ribosomal protein L28 [Stenotrophomonas maltophilia JV3]
gi|401070255|gb|EJP78772.1| 50S ribosomal protein L28 [Stenotrophomonas maltophilia Ab55555]
Length = 78
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
+GK +Q GN VS NKTRR + PN+ E+R + +R ++++V+ HALR IDK GID
Sbjct: 8 SGKRVQTGNNVSH-ANNKTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTIDK-NGID 65
Query: 110 EYL 112
L
Sbjct: 66 SVL 68
>gi|17986340|ref|NP_538974.1| 50S ribosomal protein L28 [Brucella melitensis bv. 1 str. 16M]
gi|23502863|ref|NP_698990.1| 50S ribosomal protein L28 [Brucella suis 1330]
gi|62290860|ref|YP_222653.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. 9-941]
gi|82700772|ref|YP_415346.1| 50S ribosomal protein L28 [Brucella melitensis biovar Abortus 2308]
gi|161619931|ref|YP_001593818.1| 50S ribosomal protein L28 [Brucella canis ATCC 23365]
gi|163844035|ref|YP_001628439.1| 50S ribosomal protein L28 [Brucella suis ATCC 23445]
gi|189025077|ref|YP_001935845.1| 50S ribosomal protein L28 [Brucella abortus S19]
gi|225628209|ref|ZP_03786244.1| ribosomal protein L28 [Brucella ceti str. Cudo]
gi|225853449|ref|YP_002733682.1| 50S ribosomal protein L28 [Brucella melitensis ATCC 23457]
gi|237816370|ref|ZP_04595363.1| ribosomal protein L28 [Brucella abortus str. 2308 A]
gi|256263069|ref|ZP_05465601.1| 50S ribosomal protein L28 [Brucella melitensis bv. 2 str. 63/9]
gi|256370415|ref|YP_003107926.1| 50S ribosomal protein L28 [Brucella microti CCM 4915]
gi|260546125|ref|ZP_05821865.1| LSU ribosomal protein L28P [Brucella abortus NCTC 8038]
gi|260567510|ref|ZP_05837980.1| ribosomal protein L28 [Brucella suis bv. 4 str. 40]
gi|260755689|ref|ZP_05868037.1| LSU ribosomal protein L28P [Brucella abortus bv. 6 str. 870]
gi|260758914|ref|ZP_05871262.1| LSU ribosomal protein L28P [Brucella abortus bv. 4 str. 292]
gi|260760637|ref|ZP_05872980.1| LSU ribosomal protein L28P [Brucella abortus bv. 2 str. 86/8/59]
gi|260884715|ref|ZP_05896329.1| 50S ribosomal protein L28 [Brucella abortus bv. 9 str. C68]
gi|261214964|ref|ZP_05929245.1| LSU ribosomal protein L28P [Brucella abortus bv. 3 str. Tulya]
gi|261217836|ref|ZP_05932117.1| LSU ribosomal protein L28P [Brucella ceti M13/05/1]
gi|261221066|ref|ZP_05935347.1| 50S ribosomal protein L28 [Brucella ceti B1/94]
gi|261314949|ref|ZP_05954146.1| LSU ribosomal protein L28P [Brucella pinnipedialis M163/99/10]
gi|261316494|ref|ZP_05955691.1| LSU ribosomal protein L28P [Brucella pinnipedialis B2/94]
gi|261321314|ref|ZP_05960511.1| LSU ribosomal protein L28P [Brucella ceti M644/93/1]
gi|261323957|ref|ZP_05963154.1| 50S ribosomal protein L28 [Brucella neotomae 5K33]
gi|261751158|ref|ZP_05994867.1| LSU ribosomal protein L28P [Brucella suis bv. 5 str. 513]
gi|261755721|ref|ZP_05999430.1| LSU ribosomal protein L28P [Brucella suis bv. 3 str. 686]
gi|261758952|ref|ZP_06002661.1| ribosomal protein L28 [Brucella sp. F5/99]
gi|265987567|ref|ZP_06100124.1| 50S ribosomal protein L28 [Brucella pinnipedialis M292/94/1]
gi|265992039|ref|ZP_06104596.1| 50S ribosomal protein L28 [Brucella melitensis bv. 1 str. Rev.1]
gi|265993775|ref|ZP_06106332.1| 50S ribosomal protein L28 [Brucella melitensis bv. 3 str. Ether]
gi|265997026|ref|ZP_06109583.1| 50S ribosomal protein L28 [Brucella ceti M490/95/1]
gi|294851247|ref|ZP_06791920.1| large subunit ribosomal protein L28 [Brucella sp. NVSL 07-0026]
gi|297247245|ref|ZP_06930963.1| large subunit ribosomal protein L28 [Brucella abortus bv. 5 str.
B3196]
gi|340791601|ref|YP_004757066.1| 50S ribosomal protein L28 [Brucella pinnipedialis B2/94]
gi|376272266|ref|YP_005150844.1| 50S ribosomal protein L28 [Brucella abortus A13334]
gi|376275396|ref|YP_005115835.1| 50S ribosomal protein L28 [Brucella canis HSK A52141]
gi|376281658|ref|YP_005155664.1| 50S ribosomal protein L28 [Brucella suis VBI22]
gi|384212364|ref|YP_005601448.1| 50S ribosomal protein L28 [Brucella melitensis M5-90]
gi|384225650|ref|YP_005616814.1| 50S ribosomal protein L28 [Brucella suis 1330]
gi|384409465|ref|YP_005598086.1| 50S ribosomal protein28 [Brucella melitensis M28]
gi|384446004|ref|YP_005604723.1| 50S ribosomal protein L28 [Brucella melitensis NI]
gi|423168019|ref|ZP_17154722.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. NI435a]
gi|423169605|ref|ZP_17156280.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. NI474]
gi|423175405|ref|ZP_17162074.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. NI486]
gi|423177745|ref|ZP_17164390.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. NI488]
gi|423179038|ref|ZP_17165679.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. NI010]
gi|423182169|ref|ZP_17168806.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. NI016]
gi|423186889|ref|ZP_17173503.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. NI021]
gi|423190675|ref|ZP_17177283.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. NI259]
gi|54039146|sp|P66141.1|RL28_BRUSU RecName: Full=50S ribosomal protein L28
gi|54041846|sp|P66140.1|RL28_BRUME RecName: Full=50S ribosomal protein L28
gi|75496122|sp|Q57AP2.1|RL28_BRUAB RecName: Full=50S ribosomal protein L28
gi|123547363|sp|Q2YR56.1|RL28_BRUA2 RecName: Full=50S ribosomal protein L28
gi|189042425|sp|A9M9A0.1|RL28_BRUC2 RecName: Full=50S ribosomal protein L28
gi|189042426|sp|B0CJB7.1|RL28_BRUSI RecName: Full=50S ribosomal protein L28
gi|226738040|sp|B2S8R7.1|RL28_BRUA1 RecName: Full=50S ribosomal protein L28
gi|254801345|sp|C0RFQ6.1|RL28_BRUMB RecName: Full=50S ribosomal protein L28
gi|17981927|gb|AAL51238.1| lsu ribosomal protein l28p [Brucella melitensis bv. 1 str. 16M]
gi|23348891|gb|AAN30905.1| ribosomal protein L28 [Brucella suis 1330]
gi|62196992|gb|AAX75292.1| RpmB, ribosomal protein L28 [Brucella abortus bv. 1 str. 9-941]
gi|82616873|emb|CAJ11972.1| Ribosomal protein L28:ATP/GTP-binding site motif A (P-loop)
[Brucella melitensis biovar Abortus 2308]
gi|161336742|gb|ABX63047.1| ribosomal protein L28 [Brucella canis ATCC 23365]
gi|163674758|gb|ABY38869.1| ribosomal protein L28 [Brucella suis ATCC 23445]
gi|189020649|gb|ACD73371.1| Ribosomal protein L28 [Brucella abortus S19]
gi|225617034|gb|EEH14081.1| ribosomal protein L28 [Brucella ceti str. Cudo]
gi|225641814|gb|ACO01728.1| ribosomal protein L28 [Brucella melitensis ATCC 23457]
gi|237788437|gb|EEP62652.1| ribosomal protein L28 [Brucella abortus str. 2308 A]
gi|256000578|gb|ACU48977.1| 50S ribosomal protein L28 [Brucella microti CCM 4915]
gi|260096232|gb|EEW80108.1| LSU ribosomal protein L28P [Brucella abortus NCTC 8038]
gi|260157028|gb|EEW92108.1| ribosomal protein L28 [Brucella suis bv. 4 str. 40]
gi|260669232|gb|EEX56172.1| LSU ribosomal protein L28P [Brucella abortus bv. 4 str. 292]
gi|260671069|gb|EEX57890.1| LSU ribosomal protein L28P [Brucella abortus bv. 2 str. 86/8/59]
gi|260675797|gb|EEX62618.1| LSU ribosomal protein L28P [Brucella abortus bv. 6 str. 870]
gi|260874243|gb|EEX81312.1| 50S ribosomal protein L28 [Brucella abortus bv. 9 str. C68]
gi|260916571|gb|EEX83432.1| LSU ribosomal protein L28P [Brucella abortus bv. 3 str. Tulya]
gi|260919650|gb|EEX86303.1| 50S ribosomal protein L28 [Brucella ceti B1/94]
gi|260922925|gb|EEX89493.1| LSU ribosomal protein L28P [Brucella ceti M13/05/1]
gi|261294004|gb|EEX97500.1| LSU ribosomal protein L28P [Brucella ceti M644/93/1]
gi|261295717|gb|EEX99213.1| LSU ribosomal protein L28P [Brucella pinnipedialis B2/94]
gi|261299937|gb|EEY03434.1| 50S ribosomal protein L28 [Brucella neotomae 5K33]
gi|261303975|gb|EEY07472.1| LSU ribosomal protein L28P [Brucella pinnipedialis M163/99/10]
gi|261738936|gb|EEY26932.1| ribosomal protein L28 [Brucella sp. F5/99]
gi|261740911|gb|EEY28837.1| LSU ribosomal protein L28P [Brucella suis bv. 5 str. 513]
gi|261745474|gb|EEY33400.1| LSU ribosomal protein L28P [Brucella suis bv. 3 str. 686]
gi|262551494|gb|EEZ07484.1| 50S ribosomal protein L28 [Brucella ceti M490/95/1]
gi|262764756|gb|EEZ10677.1| 50S ribosomal protein L28 [Brucella melitensis bv. 3 str. Ether]
gi|263003105|gb|EEZ15398.1| 50S ribosomal protein L28 [Brucella melitensis bv. 1 str. Rev.1]
gi|263092961|gb|EEZ17122.1| 50S ribosomal protein L28 [Brucella melitensis bv. 2 str. 63/9]
gi|264659764|gb|EEZ30025.1| 50S ribosomal protein L28 [Brucella pinnipedialis M292/94/1]
gi|294819836|gb|EFG36835.1| large subunit ribosomal protein L28 [Brucella sp. NVSL 07-0026]
gi|297174414|gb|EFH33761.1| large subunit ribosomal protein L28 [Brucella abortus bv. 5 str.
B3196]
gi|326410012|gb|ADZ67077.1| Ribosomal protein L28 [Brucella melitensis M28]
gi|326539729|gb|ADZ87944.1| ribosomal protein L28 [Brucella melitensis M5-90]
gi|340560060|gb|AEK55298.1| 50S ribosomal protein L28 [Brucella pinnipedialis B2/94]
gi|343383830|gb|AEM19322.1| 50S ribosomal protein L28 [Brucella suis 1330]
gi|349743993|gb|AEQ09536.1| 50S ribosomal protein L28 [Brucella melitensis NI]
gi|358259257|gb|AEU06992.1| 50S ribosomal protein L28 [Brucella suis VBI22]
gi|363399872|gb|AEW16842.1| ribosomal protein L28 [Brucella abortus A13334]
gi|363403963|gb|AEW14258.1| ribosomal protein L28 [Brucella canis HSK A52141]
gi|374535849|gb|EHR07370.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. NI486]
gi|374539768|gb|EHR11271.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. NI435a]
gi|374543284|gb|EHR14767.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. NI474]
gi|374549333|gb|EHR20777.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. NI488]
gi|374551982|gb|EHR23411.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. NI016]
gi|374552354|gb|EHR23782.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. NI010]
gi|374554445|gb|EHR25856.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. NI259]
gi|374557601|gb|EHR28997.1| 50S ribosomal protein L28 [Brucella abortus bv. 1 str. NI021]
Length = 97
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS N+TRR + PN+ L S + + R++++ +ALR ++ GG+
Sbjct: 7 LTGKSVQYGNNVSH-ANNRTRRRFLPNLCNVTLISETLGQSYRLRISANALRSVEHRGGL 65
Query: 109 DEYLLKT 115
D +L+K+
Sbjct: 66 DAFLVKS 72
>gi|404252275|ref|ZP_10956243.1| 50S ribosomal protein L28 [Sphingomonas sp. PAMC 26621]
Length = 100
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q L S + I+++V+ H LR ++ GG+
Sbjct: 7 LTGKGRMVGNNVSH-ANNKTKRTFLPNLQNVTLMSDALGTSIKLRVSAHGLRSVEHVGGL 65
Query: 109 DEYLLKTPYHKMD 121
D +L+KT K+
Sbjct: 66 DNWLVKTTNDKLS 78
>gi|85703478|ref|ZP_01034582.1| ribosomal protein L28 [Roseovarius sp. 217]
gi|85672406|gb|EAQ27263.1| ribosomal protein L28 [Roseovarius sp. 217]
Length = 96
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN S NKTRR + PN+ + L S ++R I+++++ HALR +D
Sbjct: 2 SRRCELTGKGPMVGNN-SSHANNKTRRRYLPNLNDVTLQSETLNRGIKLRISAHALRSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +L K
Sbjct: 61 HRGGLDAFLAK 71
>gi|319406327|emb|CBI79964.1| Ribosomal protein L28 [Bartonella sp. AR 15-3]
Length = 129
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS NKTRR + PN+ L S ++ + R++V+ ALR ++ GG+
Sbjct: 39 LTGKAVQYGNNVSH-ANNKTRRRFLPNLCNVTLISELLQQSYRLRVSASALRSVEHRGGL 97
Query: 109 DEYLLKT 115
D +L+K
Sbjct: 98 DNFLIKA 104
>gi|451942663|ref|YP_007463300.1| 50S ribosomal protein L28 [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
gi|451902050|gb|AGF76512.1| 50S ribosomal protein L28 [Bartonella vinsonii subsp. berkhoffii
str. Winnie]
Length = 101
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + +GN VS NKTRR + PN+ L S ++ + R++V+ ALR ++ GG+
Sbjct: 7 LTGKTVLYGNNVSH-ANNKTRRRFLPNLCNVTLISEVLQQSYRLRVSASALRSVEHRGGL 65
Query: 109 DEYLLK 114
D +L+K
Sbjct: 66 DSFLIK 71
>gi|399059100|ref|ZP_10744951.1| ribosomal protein L28 [Novosphingobium sp. AP12]
gi|398040081|gb|EJL33198.1| ribosomal protein L28 [Novosphingobium sp. AP12]
Length = 94
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G VS NKT+R + PN+Q L S ++R + +V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGCNVSH-ANNKTKRVFLPNLQNVTLLSDGLERSFKFRVSTHGLRSVEHNGGL 65
Query: 109 DEYLLKTPYHKMD 121
D +LLKT K+
Sbjct: 66 DNWLLKTSDTKLS 78
>gi|359319813|ref|XP_537023.3| PREDICTED: 39S ribosomal protein L28, mitochondrial isoform 1
[Canis lupus familiaris]
Length = 257
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
A+ GL+ G+ G R D + ++ WKP + ++ L+S I+D V VT L
Sbjct: 76 AQLGLWGGEGWVVGYRYVGDDKLSKRVKKVWKPQLLQRELYSEILDTKFAVTVTARTLDL 135
Query: 102 IDKAGGIDEYLLKTPYHKMDTEMGL 126
ID A G D Y+LKTP + ++ G+
Sbjct: 136 IDAAYGFDFYILKTPEEDLCSKFGM 160
>gi|407779546|ref|ZP_11126801.1| 50S ribosomal protein L28 [Nitratireductor pacificus pht-3B]
gi|407298677|gb|EKF17814.1| 50S ribosomal protein L28 [Nitratireductor pacificus pht-3B]
Length = 98
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 1/90 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKTRR + PN+ L S +++++R++V+ +ALR ++ GG+
Sbjct: 7 LTGKAVLTGNNVSH-ANNKTRRRFLPNLCHVTLQSEALNQNVRLRVSANALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
D +L+K +++ L + +KL E+
Sbjct: 66 DAFLVKAKDNELSQRARLLKRQVEKKLAEQ 95
>gi|209735506|gb|ACI68622.1| 39S ribosomal protein L28, mitochondrial precursor [Salmo salar]
Length = 252
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTR--RNWKPNVQEKRLFSYIMDRHIR 91
VP ++ GL+ G+ G R + + TR R WKP + + L+S I++
Sbjct: 65 VPIPIYYPPESQDGLWGGEGWISGFRYANNDKLSTRLERVWKPQLFTRELYSEILNHKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+ VT AL ID A G D Y+L+TP +++++G+
Sbjct: 125 ITVTARALDLIDAAYGFDFYILRTPKEDLNSKLGM 159
>gi|417397930|gb|JAA45998.1| Putative 39s ribosomal protein l28 mitochondrial [Desmodus
rotundus]
Length = 256
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Query: 44 AKRGLFAGKHIQFGNR-VSEDGGNK-TRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
+++GL+ G+ G+R V+ D +K ++ WKP + ++ L+S I+D V VT L
Sbjct: 75 SQQGLWGGEGWILGHRYVNNDKLSKRVKKVWKPQLFQRELYSEILDTKFSVTVTMRTLDL 134
Query: 102 IDKAGGIDEYLLKTPYHKMDTEMGL 126
ID+A G D Y+LKTP + ++ G+
Sbjct: 135 IDEAYGFDFYILKTPKEDLCSKFGM 159
>gi|293339967|ref|XP_001061401.2| PREDICTED: 39S ribosomal protein L28, mitochondrial isoform 1
[Rattus norvegicus]
gi|293351387|ref|XP_573060.3| PREDICTED: 39S ribosomal protein L28, mitochondrial isoform 2
[Rattus norvegicus]
gi|392331678|ref|XP_003752357.1| PREDICTED: 39S ribosomal protein L28, mitochondrial isoform 2
[Rattus norvegicus]
gi|392351099|ref|XP_003750842.1| PREDICTED: 39S ribosomal protein L28, mitochondrial isoform 1
[Rattus norvegicus]
gi|149052177|gb|EDM03994.1| similar to 39S ribosomal protein L28, mitochondrial precursor
(L28mt) (MRP-L28) [Rattus norvegicus]
Length = 257
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
+++ L+ G+ + G R + + N+ ++ WKP + + L+S I+D+ V VT L
Sbjct: 75 SQQELWGGEGLILGYRYANNDKLSNRVKKVWKPQLFTRELYSEILDKKFTVTVTMRTLDL 134
Query: 102 IDKAGGIDEYLLKTPYHKMDTEMGL 126
ID+A G D Y+LKTP + ++ G+
Sbjct: 135 IDEAYGFDFYILKTPEEDLCSKFGM 159
>gi|118592089|ref|ZP_01549483.1| 50S ribosomal protein L28 [Stappia aggregata IAM 12614]
gi|118435385|gb|EAV42032.1| 50S ribosomal protein L28 [Labrenzia aggregata IAM 12614]
Length = 98
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R +GK + GN VS N++RR + PN+ L S + ++KV HALR ++
Sbjct: 2 ARRCELSGKDVMTGNNVSH-ANNRSRRRFLPNLCNVSLISDTLGETFKLKVCAHALRSVE 60
Query: 104 KAGGIDEYLLKTP 116
GG+D YL+K
Sbjct: 61 HRGGLDAYLMKAS 73
>gi|395788076|ref|ZP_10467652.1| 50S ribosomal protein L28 [Bartonella birtlesii LL-WM9]
gi|395409858|gb|EJF76443.1| 50S ribosomal protein L28 [Bartonella birtlesii LL-WM9]
Length = 122
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + +GN VS NKTRR + PN+ L S ++ ++ R++V+ ALR ++ GG+
Sbjct: 32 LTGKTVLYGNNVSH-ANNKTRRRFLPNLCNVTLISEVLQQNYRLRVSASALRSVEHRGGL 90
Query: 109 DEYLLK 114
D +LLK
Sbjct: 91 DGFLLK 96
>gi|410985631|ref|XP_003999122.1| PREDICTED: 39S ribosomal protein L28, mitochondrial [Felis catus]
Length = 256
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++ GL+ G+ G+R + + + ++ WKP + +++L+S I+D
Sbjct: 65 VPVPIYYPPESQLGLWGGEGWVLGHRYTNNDKLSKRVKKVWKPQLFQRQLYSEILDTKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G D Y+LKTP + ++ G+
Sbjct: 125 VTVTMRTLDLIDEAYGFDFYILKTPKEDLCSKFGM 159
>gi|395792742|ref|ZP_10472166.1| 50S ribosomal protein L28 [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|423713405|ref|ZP_17687665.1| 50S ribosomal protein L28 [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395423446|gb|EJF89641.1| 50S ribosomal protein L28 [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395432299|gb|EJF98288.1| 50S ribosomal protein L28 [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 101
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + +GN VS NKTRR + PN+ L S ++ + R++V+ ALR ++ GG+
Sbjct: 7 LTGKTVLYGNNVSH-ANNKTRRRFLPNLCNVTLISEVLQQSYRLRVSASALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEK 134
D +L+K ++ L + I+K
Sbjct: 66 DSFLIKADDKELSQRARLLKRQIIKK 91
>gi|334143007|ref|YP_004536219.1| 50S ribosomal protein L28 [Novosphingobium sp. PP1Y]
gi|359398956|ref|ZP_09191968.1| large subunit ribosomal protein L28 [Novosphingobium
pentaromativorans US6-1]
gi|333941043|emb|CCA94401.1| large subunit ribosomal protein L28 [Novosphingobium sp. PP1Y]
gi|357599710|gb|EHJ61417.1| large subunit ribosomal protein L28 [Novosphingobium
pentaromativorans US6-1]
Length = 94
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G VS NKT+R + PN+Q L S ++R + +V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGCNVSH-ANNKTKRVFLPNLQNVTLMSEGLERSFKFRVSTHGLRSVEHNGGL 65
Query: 109 DEYLLKTPYHKMD 121
D +LLKT K+
Sbjct: 66 DNWLLKTSDTKLS 78
>gi|390451530|ref|ZP_10237103.1| 50S ribosomal protein L28 [Nitratireductor aquibiodomus RA22]
gi|389660895|gb|EIM72540.1| 50S ribosomal protein L28 [Nitratireductor aquibiodomus RA22]
Length = 98
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKTRR + PN+ L S + +++R++V+ +ALR ++ GG+
Sbjct: 7 LTGKAVMTGNNVSH-ANNKTRRRFLPNLCHVTLQSEALGQNVRLRVSANALRTVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
D +L+K +++ L K +K+ E+
Sbjct: 66 DAFLVKAKANELSQRARLLKKQVEKKIAEQ 95
>gi|194219444|ref|XP_001915458.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Equus
caballus]
Length = 258
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 44 AKRGLFAGKHIQFGNR-VSEDGGNKTRRN-WKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
++ GL+ G+ G+R V+ D +K +N WKP + ++ L+S I+D V VT L
Sbjct: 75 SQLGLWGGEGWILGHRYVNNDKLSKRVKNVWKPQLFQRELYSEILDTKFTVTVTMRTLDL 134
Query: 102 IDKAGGIDEYLLKTPYHKMDTEMGL 126
ID+A G D Y+LKTP + ++ G+
Sbjct: 135 IDEAYGFDFYILKTPKEDLCSKFGM 159
>gi|451941245|ref|YP_007461883.1| 50S ribosomal protein L28 [Bartonella australis Aust/NH1]
gi|451900632|gb|AGF75095.1| 50S ribosomal protein L28 [Bartonella australis Aust/NH1]
Length = 97
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS NKTRR + PN+ L S + + R++++ +ALR ++ GG+
Sbjct: 7 LTGKTVQYGNNVSH-ANNKTRRRFLPNLCNVTLISEALQKSYRLRISANALRSVEHRGGL 65
Query: 109 DEYLLK 114
D +L+K
Sbjct: 66 DGFLVK 71
>gi|408376466|ref|ZP_11174071.1| 50S ribosomal protein L28 [Agrobacterium albertimagni AOL15]
gi|407749933|gb|EKF61444.1| 50S ribosomal protein L28 [Agrobacterium albertimagni AOL15]
Length = 96
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q GN VS NKT+R + PN+ + L S +++ R++V+ ALR ++ GG+
Sbjct: 7 LTGKGVQSGNNVSH-ANNKTKRRFLPNLCDVTLISDALNQRFRLRVSAAALRTVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +L+K ++ L + ++K E
Sbjct: 66 DAFLIKASETELSMRARLLRRQIVKKTAE 94
>gi|256090758|ref|XP_002581348.1| hypothetical protein [Schistosoma mansoni]
gi|360043009|emb|CCD78420.1| hypothetical protein Smp_181290 [Schistosoma mansoni]
Length = 248
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 23/150 (15%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
+++ L+ G+ I G ++ + + W P + E S I+DR + + VT AL+ I+
Sbjct: 68 SQKCLWGGEGIIQGYWEKKNQKPRFPKTWSPVLMENLFHSEILDRWMIIIVTDSALKQIE 127
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKT-------------KIEKLYEELGQTEVAFFTPE 150
KA G D Y+L TP K+ + +G++ K K+EK +E+ + F P
Sbjct: 128 KASGFDFYILSTPESKLKSRLGMHLKRDMLVTLAKAKMNGKMEKGWEKYSK----FIIPL 183
Query: 151 EEAK-----LEQDF-KDMKLAQRAARRELR 174
EEA+ LE+ K MK+ +R +L+
Sbjct: 184 EEAEWIGLTLEEAVKKQMKIEHEISRSQLK 213
>gi|307942521|ref|ZP_07657869.1| 50S ribosomal protein L28 [Roseibium sp. TrichSKD4]
gi|307774160|gb|EFO33373.1| 50S ribosomal protein L28 [Roseibium sp. TrichSKD4]
Length = 129
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R +GK + GN VS NK+RR + PN+ L S + +++++ HALR ++
Sbjct: 33 ARRCELSGKDVMTGNNVSH-ANNKSRRRFLPNLCNVSLLSDTLGETFKLRISAHALRSVE 91
Query: 104 KAGGIDEYLLK 114
GG+D YL+K
Sbjct: 92 HRGGLDNYLMK 102
>gi|452751347|ref|ZP_21951093.1| LSU ribosomal protein L28p [alpha proteobacterium JLT2015]
gi|451961497|gb|EMD83907.1| LSU ribosomal protein L28p [alpha proteobacterium JLT2015]
Length = 99
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS N+ +R + PN+Q+ L S + R +KV+TH LRC++ GG+
Sbjct: 7 LTGKGRLVGNHVSH-ANNRVKRVFLPNLQKVSLISDALGRAETLKVSTHGLRCVEHNGGL 65
Query: 109 DEYLLKTPYHKMD 121
D +L+KT K+
Sbjct: 66 DNWLVKTKNEKLS 78
>gi|389585288|dbj|GAB68019.1| hypothetical protein PCYB_125850 [Plasmodium cynomolgi strain B]
Length = 271
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHI-RVKVTT 96
R+ ++ GL+ + + +VS KTR KPNV +K + S I++ I VKVTT
Sbjct: 39 RVPSAASQTGLYHDEDYNYYTKVSY-SLKKTRIKLKPNVFKKHIVSNILNTIIPNVKVTT 97
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMG----------LYWKTKIEKLYEELGQTEVAF 146
AL +D AGG D Y+L+TP ++ + G L WK + K + A
Sbjct: 98 SALHAMDDAGGFDNYILRTPPEELRSNFGEKLKSVISFSLPWKIFMSKF--QQSDFYYAI 155
Query: 147 FTPEEEAKLEQDFKDMKLAQ 166
+ + +L + +KD + AQ
Sbjct: 156 YQHLRKKRLHELYKDKQSAQ 175
>gi|94498764|ref|ZP_01305312.1| ribosomal protein L28 [Sphingomonas sp. SKA58]
gi|94421773|gb|EAT06826.1| ribosomal protein L28 [Sphingomonas sp. SKA58]
Length = 97
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G+ VS NKT+R + PN+Q L S ++ ++++V+TH LR ++ GG+
Sbjct: 7 LTGKGRQVGHNVSH-ANNKTKRVFLPNLQNVSLISEALETTVKLRVSTHGLRSVEHNGGL 65
Query: 109 DEYLLKTPYHKM 120
D +L+KT K+
Sbjct: 66 DNWLVKTSDDKL 77
>gi|15966421|ref|NP_386774.1| 50S ribosomal protein L28 [Sinorhizobium meliloti 1021]
gi|334317426|ref|YP_004550045.1| 50S ribosomal protein L28 [Sinorhizobium meliloti AK83]
gi|384530552|ref|YP_005714640.1| 50S ribosomal protein L28 [Sinorhizobium meliloti BL225C]
gi|384537252|ref|YP_005721337.1| 50S ribosomal protein L28 [Sinorhizobium meliloti SM11]
gi|407721735|ref|YP_006841397.1| 50S ribosomal protein L28 [Sinorhizobium meliloti Rm41]
gi|418400156|ref|ZP_12973699.1| 50S ribosomal protein L28 [Sinorhizobium meliloti CCNWSX0020]
gi|433614489|ref|YP_007191287.1| ribosomal protein L28 [Sinorhizobium meliloti GR4]
gi|20139560|sp|Q92MF4.1|RL28_RHIME RecName: Full=50S ribosomal protein L28
gi|15075692|emb|CAC47247.1| Probable 50S ribosomal protein L28 [Sinorhizobium meliloti 1021]
gi|333812728|gb|AEG05397.1| 50S ribosomal protein L28 [Sinorhizobium meliloti BL225C]
gi|334096420|gb|AEG54431.1| 50S ribosomal protein L28 [Sinorhizobium meliloti AK83]
gi|336034144|gb|AEH80076.1| 50S ribosomal protein L28 [Sinorhizobium meliloti SM11]
gi|359505832|gb|EHK78351.1| 50S ribosomal protein L28 [Sinorhizobium meliloti CCNWSX0020]
gi|407319967|emb|CCM68571.1| 50S ribosomal protein L28 [Sinorhizobium meliloti Rm41]
gi|429552679|gb|AGA07688.1| ribosomal protein L28 [Sinorhizobium meliloti GR4]
Length = 96
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q GN VS NKT+R + PN+ L S + + R++V+ ALR ++ GG+
Sbjct: 7 LTGKGVQSGNNVSH-ANNKTKRKFLPNLCNVTLISDALGQRFRLRVSAAALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +LLK +++ L + ++K E
Sbjct: 66 DAFLLKADENELSMRARLLRRQIVKKAAE 94
>gi|260575323|ref|ZP_05843323.1| ribosomal protein L28 [Rhodobacter sp. SW2]
gi|259022583|gb|EEW25879.1| ribosomal protein L28 [Rhodobacter sp. SW2]
Length = 94
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
+GK GN VS NK+RR + PN+ E L S ++ + +++++ HALR +D GG+
Sbjct: 7 LSGKGPMSGNTVSH-ANNKSRRRFLPNLNEVTLISDVLGQSFKLRISAHALRSVDHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKL 135
D +L K ++ ++ L K +I K+
Sbjct: 66 DAFLAKAKDDEL-SDKALKIKKEISKV 91
>gi|330813137|ref|YP_004357376.1| 50S ribosomal protein L28 [Candidatus Pelagibacter sp. IMCC9063]
gi|327486232|gb|AEA80637.1| LSU ribosomal protein L28p [Candidatus Pelagibacter sp. IMCC9063]
Length = 116
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+++ L S +++++I K++T AL+ +D GGI
Sbjct: 30 LTGKRPMSGNTVSH-SNNKTKRKFYPNLKKVSLRSELLNKNISFKISTRALKAVDFRGGI 88
Query: 109 DEYLLKTPYHKM 120
DE+L++ K+
Sbjct: 89 DEFLIRAKNAKL 100
>gi|309243067|ref|NP_001026530.2| 39S ribosomal protein L28, mitochondrial [Gallus gallus]
gi|363739495|ref|XP_003642183.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Gallus
gallus]
gi|363745266|ref|XP_003643246.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Gallus
gallus]
Length = 251
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTR--RNWKPNVQEKRLFSYIMDRHIR 91
VP + A GL+ G+ G R + + TR + WKP + +++ +S I+D +
Sbjct: 65 VPVPVFLPRAADEGLWGGEGWIRGFRYANNDKLSTRVPKIWKPQLFKRQFYSEILDAKLT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+ VT L ID+A G D Y+LKTP M +++G+
Sbjct: 125 ITVTMRTLDLIDQAYGFDFYILKTPKADMCSKLGM 159
>gi|315121776|ref|YP_004062265.1| 50S ribosomal protein L28 [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495178|gb|ADR51777.1| 50S ribosomal protein L28 [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 103
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 52 KHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEY 111
K + GN+VS NKT+R + PN+ L S IM + +++++ HALR +++ GG+D++
Sbjct: 10 KTVMSGNKVSR-SNNKTKRRFLPNLCRITLISDIMGQQYQLRISKHALRSVERQGGLDQF 68
Query: 112 LLKTPYHKMDTEMGLYWKTKIEKLYEE 138
LL + + L I+K+ E+
Sbjct: 69 LLHSKKENLSDRTRLLRSQIIKKISEK 95
>gi|393720835|ref|ZP_10340762.1| 50S ribosomal protein L28 [Sphingomonas echinoides ATCC 14820]
Length = 100
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q L S + ++++V+ H LR ++ GG+
Sbjct: 7 LTGKGRMVGNNVSH-ANNKTKRTFLPNLQNVTLISDALGTSVKLRVSAHGLRSVEHVGGL 65
Query: 109 DEYLLKTPYHKM 120
D +L+KT K+
Sbjct: 66 DNWLVKTTDDKL 77
>gi|449691561|ref|XP_004212720.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like, partial
[Hydra magnipapillata]
Length = 122
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 68 TRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLY 127
T+R WKPNV E+ S +++ +R T A+R ID AGG D Y+L+TP + + + +
Sbjct: 6 TKRFWKPNVFEREYHSDLLNETVRYTFTMKAVRAIDYAGGFDNYILRTPDNVLVSNAAIA 65
Query: 128 WKTKIEKL 135
K K+E +
Sbjct: 66 LKRKMETV 73
>gi|395490687|ref|ZP_10422266.1| 50S ribosomal protein L28 [Sphingomonas sp. PAMC 26617]
Length = 100
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q L S + ++++V+ H LR ++ GG+
Sbjct: 7 LTGKGRMVGNNVSH-ANNKTKRTFLPNLQNVTLMSDALGTSVKLRVSAHGLRSVEHVGGL 65
Query: 109 DEYLLKTPYHKMD 121
D +L+KT K+
Sbjct: 66 DNWLVKTTNDKLS 78
>gi|395778816|ref|ZP_10459327.1| 50S ribosomal protein L28 [Bartonella elizabethae Re6043vi]
gi|423714666|ref|ZP_17688890.1| 50S ribosomal protein L28 [Bartonella elizabethae F9251]
gi|395416991|gb|EJF83343.1| 50S ribosomal protein L28 [Bartonella elizabethae Re6043vi]
gi|395430885|gb|EJF96913.1| 50S ribosomal protein L28 [Bartonella elizabethae F9251]
Length = 105
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + +GN VS NKTRR + PN+ L S ++ + R++++ +ALR ++ GG+
Sbjct: 7 LTGKTVLYGNNVSH-ANNKTRRRFLPNLCNVTLISEVLQQSYRLRISANALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
D +L+K ++ L + I+K E+
Sbjct: 66 DGFLVKADDKELSQRARLLKRQIIKKKAEQ 95
>gi|433677516|ref|ZP_20509488.1| 50S ribosomal protein L28 [Xanthomonas translucens pv. translucens
DSM 18974]
gi|440730645|ref|ZP_20910723.1| 50S ribosomal protein L28 [Xanthomonas translucens DAR61454]
gi|430817360|emb|CCP39892.1| 50S ribosomal protein L28 [Xanthomonas translucens pv. translucens
DSM 18974]
gi|440378029|gb|ELQ14662.1| 50S ribosomal protein L28 [Xanthomonas translucens DAR61454]
Length = 78
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
+GK +Q GN VS N+TRR + PN+ E+R + +R I+++V+ HALR IDK GID
Sbjct: 8 SGKRVQTGNNVSH-ANNRTRRRFLPNLHERRFWVASENRWIKLRVSAHALRTIDK-NGID 65
Query: 110 EYL 112
L
Sbjct: 66 AVL 68
>gi|126731524|ref|ZP_01747330.1| ribosomal protein L28 [Sagittula stellata E-37]
gi|126708060|gb|EBA07120.1| ribosomal protein L28 [Sagittula stellata E-37]
Length = 95
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+ + L S + R ++++++ HALR +D GG+
Sbjct: 7 LTGKGPMVGNNVSH-ANNKTKRRYLPNLNDVTLQSETLGRGVKLRISAHALRSVDHRGGL 65
Query: 109 DEYLLKTPYHKMDTEM 124
D++L K DTE+
Sbjct: 66 DKFLAKAK----DTEL 77
>gi|395764792|ref|ZP_10445412.1| 50S ribosomal protein L28 [Bartonella sp. DB5-6]
gi|395413609|gb|EJF80071.1| 50S ribosomal protein L28 [Bartonella sp. DB5-6]
Length = 101
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + +GN VS NKTRR + PN+ L S ++ + R++V+ ALR ++ GG+
Sbjct: 7 LTGKTVLYGNNVSH-ANNKTRRRFLPNLCNVTLISEVLQQSYRLRVSASALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
D +L+K ++ L + ++K E+
Sbjct: 66 DGFLVKAADKELSQRARLLKRQIVKKKAEQ 95
>gi|442761797|gb|JAA73057.1| Putative 39s ribosomal protein l28, partial [Ixodes ricinus]
Length = 299
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 15/133 (11%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
VP I ++G++ G+ I FG R + G + + + P ++ ++S I+D+++RV
Sbjct: 94 VPIPVIYPKECQQGIWGGEGIIFGYRRRKYG--RYVKYFTPILKRSVVYSEILDKYMRVT 151
Query: 94 VTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKI------EKLY--EELGQTEVA 145
+T + I++ G D+Y+LKTP + +++ L + K+ + LY +E Q EV
Sbjct: 152 LTERTVLLINQNFGFDQYILKTPVQDLKSQLALDLRRKMLLALARKDLYHDDEKKQREVL 211
Query: 146 -----FFTPEEEA 153
F PEEEA
Sbjct: 212 EKYKEFIIPEEEA 224
>gi|148229105|ref|NP_001087550.1| 39S ribosomal protein L28, mitochondrial precursor [Xenopus laevis]
gi|82181742|sp|Q68EV6.1|RM28_XENLA RecName: Full=39S ribosomal protein L28, mitochondrial;
Short=L28mt; Short=MRP-L28; Flags: Precursor
gi|51261504|gb|AAH80094.1| MGC84279 protein [Xenopus laevis]
Length = 253
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP +A +GL+ G+ G + + + ++ WKP + ++ L+S I+D+
Sbjct: 65 VPILPYFPPQANKGLWGGEGWVTGYHYANNDKLSARVKKVWKPQLFKRELYSEILDKKFS 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+ VT L ID A G D Y+LKTP +++++G+
Sbjct: 125 ITVTMRTLDLIDAAYGFDFYILKTPKEDLNSKVGM 159
>gi|393774307|ref|ZP_10362672.1| 50S ribosomal protein L28 [Novosphingobium sp. Rr 2-17]
gi|392720163|gb|EIZ77663.1| 50S ribosomal protein L28 [Novosphingobium sp. Rr 2-17]
Length = 94
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G VS NKT+R + PN+Q L S ++R + +V+TH LR ++ GG+
Sbjct: 7 LTGKSRQVGCNVSH-ANNKTKRVFLPNLQNVTLLSDGLERSFKFRVSTHGLRSVEHNGGL 65
Query: 109 DEYLLKTPYHKM 120
D +LLK K+
Sbjct: 66 DNWLLKASDEKL 77
>gi|159185825|ref|NP_356994.2| 50S ribosomal protein L28 [Agrobacterium fabrum str. C58]
gi|332716407|ref|YP_004443873.1| 50S ribosomal protein L28 [Agrobacterium sp. H13-3]
gi|335033233|ref|ZP_08526602.1| 50S ribosomal protein L28 [Agrobacterium sp. ATCC 31749]
gi|408784834|ref|ZP_11196584.1| 50S ribosomal protein L28 [Rhizobium lupini HPC(L)]
gi|418300552|ref|ZP_12912373.1| 50S ribosomal protein L28 [Agrobacterium tumefaciens CCNWGS0286]
gi|418406004|ref|ZP_12979324.1| 50S ribosomal protein L28 [Agrobacterium tumefaciens 5A]
gi|424912389|ref|ZP_18335766.1| ribosomal protein L28 [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|22096068|sp|Q8U9V8.1|RL28_AGRT5 RecName: Full=50S ribosomal protein L28
gi|159140959|gb|AAK89779.2| 50S ribosomal protein L28 [Agrobacterium fabrum str. C58]
gi|325063092|gb|ADY66782.1| 50S ribosomal protein L28 [Agrobacterium sp. H13-3]
gi|333795410|gb|EGL66738.1| 50S ribosomal protein L28 [Agrobacterium sp. ATCC 31749]
gi|355533391|gb|EHH02724.1| 50S ribosomal protein L28 [Agrobacterium tumefaciens CCNWGS0286]
gi|358007917|gb|EHK00240.1| 50S ribosomal protein L28 [Agrobacterium tumefaciens 5A]
gi|392848420|gb|EJB00943.1| ribosomal protein L28 [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|408489173|gb|EKJ97477.1| 50S ribosomal protein L28 [Rhizobium lupini HPC(L)]
Length = 96
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q GN VS NKT+R + PN+ + L S + + R++V+ ALR ++ GG+
Sbjct: 7 LTGKGVQTGNNVSH-ANNKTKRRFLPNLCQVTLISDALGQRFRLRVSAAALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +LLK+ +++ L + +K E
Sbjct: 66 DAFLLKSGENELSMRARLLRRQIAKKTAE 94
>gi|190893654|ref|YP_001980196.1| 50S ribosomal protein L28 [Rhizobium etli CIAT 652]
gi|218458580|ref|ZP_03498671.1| 50S ribosomal protein L28 [Rhizobium etli Kim 5]
gi|218510181|ref|ZP_03508059.1| 50S ribosomal protein L28 [Rhizobium etli Brasil 5]
gi|218517127|ref|ZP_03513967.1| 50S ribosomal protein L28 [Rhizobium etli 8C-3]
gi|417109903|ref|ZP_11963446.1| 50S ribosomal protein L28 [Rhizobium etli CNPAF512]
gi|226699152|sp|B3PPE3.1|RL28_RHIE6 RecName: Full=50S ribosomal protein L28
gi|190698933|gb|ACE93018.1| 50S ribosomal protein L28 [Rhizobium etli CIAT 652]
gi|327188703|gb|EGE55902.1| 50S ribosomal protein L28 [Rhizobium etli CNPAF512]
Length = 99
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKT+R + PN+ + L S +++ R++V+ ALR ++ GG+
Sbjct: 7 LTGKAVLTGNNVSH-ANNKTKRRFLPNLCQVTLISDALNQRYRLRVSAAALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +LLK +++ L + ++K E
Sbjct: 66 DAFLLKASENELSMRARLLRRQIVKKTAE 94
>gi|156100187|ref|XP_001615821.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148804695|gb|EDL46094.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 281
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHI-RVKVTT 96
R+ ++ GL+ + + +VS KTR KPNV +K + S I++ I VKVTT
Sbjct: 39 RVPSAASQTGLYHDEDYNYYTKVSY-SLKKTRIKLKPNVFKKHIVSNILNTIIPNVKVTT 97
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
AL +D AGG D Y+L+TP ++ + G
Sbjct: 98 SALHAMDDAGGFDNYILRTPPEELRSNFG 126
>gi|21233456|ref|NP_639373.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|21244876|ref|NP_644458.1| 50S ribosomal protein L28 [Xanthomonas axonopodis pv. citri str.
306]
gi|66770420|ref|YP_245182.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. campestris
str. 8004]
gi|78049813|ref|YP_365988.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|84625952|ref|YP_453324.1| 50S ribosomal protein L28 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188993625|ref|YP_001905635.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. campestris
str. B100]
gi|289666100|ref|ZP_06487681.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. vasculorum
NCPPB 702]
gi|289670773|ref|ZP_06491848.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. musacearum
NCPPB 4381]
gi|325916749|ref|ZP_08179003.1| LSU ribosomal protein L28P [Xanthomonas vesicatoria ATCC 35937]
gi|325925992|ref|ZP_08187358.1| 50S ribosomal protein L28 [Xanthomonas perforans 91-118]
gi|346726894|ref|YP_004853563.1| 50S ribosomal protein L28 [Xanthomonas axonopodis pv. citrumelo F1]
gi|418517607|ref|ZP_13083768.1| 50S ribosomal protein L28 [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
gi|418522164|ref|ZP_13088202.1| 50S ribosomal protein L28 [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|424791606|ref|ZP_18217968.1| 50S ribosomal protein L28 [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|54039155|sp|P66161.1|RL28_XANCP RecName: Full=50S ribosomal protein L28
gi|54041854|sp|P66160.1|RL28_XANAC RecName: Full=50S ribosomal protein L28
gi|81303633|sp|Q4UP61.1|RL28_XANC8 RecName: Full=50S ribosomal protein L28
gi|123520476|sp|Q2NXC7.1|RL28_XANOM RecName: Full=50S ribosomal protein L28
gi|123583817|sp|Q3BMM5.1|RL28_XANC5 RecName: Full=50S ribosomal protein L28
gi|226699184|sp|B0RYR3.1|RL28_XANCB RecName: Full=50S ribosomal protein L28
gi|21110585|gb|AAM38994.1| 50S ribosomal protein L28 [Xanthomonas axonopodis pv. citri str.
306]
gi|21115302|gb|AAM43255.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66575752|gb|AAY51162.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. campestris
str. 8004]
gi|78038243|emb|CAJ25988.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|84369892|dbj|BAE71050.1| 50S ribosomal protein L28 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|167735385|emb|CAP53599.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. campestris]
gi|325537003|gb|EGD08745.1| LSU ribosomal protein L28P [Xanthomonas vesicatoria ATCC 35937]
gi|325543588|gb|EGD15005.1| 50S ribosomal protein L28 [Xanthomonas perforans 91-118]
gi|346651641|gb|AEO44265.1| 50S ribosomal protein L28 [Xanthomonas axonopodis pv. citrumelo F1]
gi|410701528|gb|EKQ60049.1| 50S ribosomal protein L28 [Xanthomonas axonopodis pv. malvacearum
str. GSPB2388]
gi|410705719|gb|EKQ64188.1| 50S ribosomal protein L28 [Xanthomonas axonopodis pv. malvacearum
str. GSPB1386]
gi|422797503|gb|EKU25803.1| 50S ribosomal protein L28 [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 78
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
+GK +Q GN VS N+TRR + PN+ E+R + +R ++++V+ HALR IDK GID
Sbjct: 8 SGKRVQTGNNVSH-ANNRTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTIDK-NGID 65
Query: 110 EYL 112
L
Sbjct: 66 AVL 68
>gi|443717128|gb|ELU08323.1| hypothetical protein CAPTEDRAFT_171915 [Capitella teleta]
Length = 287
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTR--RNWKPNVQEKRLFSYIMDRHIR 91
VP I A GL+ G+ G R D +K R R W+P + + +S I+D +
Sbjct: 81 VPVPLIFPREADEGLWGGEAFLQGMRKKGDDPHKPRVWRLWRPFLMPRVFYSEILDEWLT 140
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK------LYEELGQTEVA 145
+ VT L +D+ G D Y+L + + +G+ K K+ + L EE+ +
Sbjct: 141 ITVTLRTLDLVDEVAGFDHYILSMHEVDLRSRLGMKLKAKMLQRLADGNLKEEIQEKYAK 200
Query: 146 FFTPEEE 152
+ PEEE
Sbjct: 201 YMIPEEE 207
>gi|126133881|ref|XP_001383465.1| mitochondrial 54S ribosomal protein YmL24/YmL14 [Scheffersomyces
stipitis CBS 6054]
gi|126095614|gb|ABN65436.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 266
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 11/164 (6%)
Query: 39 IVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHA 98
+ R RGLF G + SE GNK R PN+Q+ +L+S + + I +KV+T
Sbjct: 84 MFFKRQNRGLFGGVQRKRSKTCSE-SGNKGLRVHLPNIQKTKLWSETLQKSIPIKVSTKV 142
Query: 99 LRCIDKAGGIDEYLLKTPYHKMDTEMGLY-WKTKIEKLYEELGQTEVAFFTP--EEEAKL 155
L+ I K GG+D YL K + T +GL W+ + Y+ L Q E+ +EE K+
Sbjct: 143 LKTITKEGGLDNYLTKNKPSREKT-LGLKGWQLR----YQVLKQRELNELPAIKDEEDKI 197
Query: 156 EQDFKDMKLAQR--AARRELRRQMYGGSSKQKQIEQGSADTQET 197
Q F + +R + +L +++Y + AD T
Sbjct: 198 RQVFYIHEDGKRFVVGKNKLLKELYPFVRRDSYTHVSHADFTRT 241
>gi|393723612|ref|ZP_10343539.1| 50S ribosomal protein L28 [Sphingomonas sp. PAMC 26605]
Length = 101
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q L S + ++++V+ H LR ++ GG+
Sbjct: 7 LTGKGRMVGNNVSH-ANNKTKRTFLPNLQNVTLISDALGTSVKLRVSAHGLRSVEHVGGL 65
Query: 109 DEYLLKTPYHKM 120
D +L+KT K+
Sbjct: 66 DNWLVKTTDDKL 77
>gi|407976812|ref|ZP_11157708.1| 50S ribosomal protein L28 [Nitratireductor indicus C115]
gi|407427711|gb|EKF40399.1| 50S ribosomal protein L28 [Nitratireductor indicus C115]
Length = 98
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKTRR + PN+ L S + + +R++V+ +ALR ++ GG+
Sbjct: 7 LTGKAVLTGNNVSH-ANNKTRRRFLPNLCHVTLQSETLGQSVRLRVSANALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
D +L+K +++ L K +KL E+
Sbjct: 66 DAFLVKAKTNELSQRARLLKKQIEKKLGEQ 95
>gi|163869259|ref|YP_001610515.1| 50S ribosomal protein L28 [Bartonella tribocorum CIP 105476]
gi|161018962|emb|CAK02520.1| 50S ribosomal protein L28 [Bartonella tribocorum CIP 105476]
Length = 105
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + +GN VS NKTRR + PN+ L S ++ + R++++ +ALR ++ GG+
Sbjct: 7 LTGKTVLYGNNVSH-ANNKTRRRFLPNLCNVTLISEVLQQSYRLRISANALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
D +L+K ++ L + ++K E+
Sbjct: 66 DGFLVKADDKELSQRARLLKRQIVKKKAEQ 95
>gi|359789079|ref|ZP_09292038.1| 50S ribosomal protein L28 [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255065|gb|EHK58011.1| 50S ribosomal protein L28 [Mesorhizobium alhagi CCNWXJ12-2]
Length = 98
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKTRR + PN+ L S +++++R++++ +ALR ++ GG+
Sbjct: 7 LTGKAVMSGNNVSH-ANNKTRRRFLPNLVNVTLISEALNQNVRLRISANALRTVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWK 129
D +L K ++ L K
Sbjct: 66 DAFLAKADVAELSQRARLLKK 86
>gi|222149976|ref|YP_002550933.1| 50S ribosomal protein L28 [Agrobacterium vitis S4]
gi|254801494|sp|B9JTL3.1|RL28_AGRVS RecName: Full=50S ribosomal protein L28
gi|221736958|gb|ACM37921.1| 50S ribosomal protein L28 [Agrobacterium vitis S4]
Length = 96
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q GN VS NKTRR + PN+ + L S + + R++V+ ALR ++ GG+
Sbjct: 7 LTGKGVQSGNNVSH-ANNKTRRKFLPNLCDVTLISDALGQRYRLRVSAAALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEK 134
D +LLK ++ L + ++K
Sbjct: 66 DAFLLKANETELSMRARLLRRQIVKK 91
>gi|150397754|ref|YP_001328221.1| 50S ribosomal protein L28 [Sinorhizobium medicae WSM419]
gi|166227338|sp|A6UCK6.1|RL28_SINMW RecName: Full=50S ribosomal protein L28
gi|150029269|gb|ABR61386.1| ribosomal protein L28 [Sinorhizobium medicae WSM419]
Length = 96
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q GN VS NKT+R + PN+ L S + + R++V+ ALR ++ GG+
Sbjct: 7 LTGKGVQSGNNVSH-ANNKTKRKFLPNLCNVTLISDALGQRFRLRVSAAALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +LLK ++ L + ++K E
Sbjct: 66 DAFLLKADETELSMRARLLRRQIVKKAAE 94
>gi|409439292|ref|ZP_11266347.1| 50S ribosomal protein L28 [Rhizobium mesoamericanum STM3625]
gi|408749087|emb|CCM77526.1| 50S ribosomal protein L28 [Rhizobium mesoamericanum STM3625]
Length = 98
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKT+R + PN+ + L S + + R++V+ ALR ++ GG+
Sbjct: 7 LTGKAVLVGNNVSH-ANNKTKRRFLPNLCQVTLISDALGQRYRLRVSASALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +LLK +++ L + ++K E
Sbjct: 66 DAFLLKASENELSMRARLLRRQIVKKTAE 94
>gi|126739957|ref|ZP_01755647.1| ribosomal protein L28 [Roseobacter sp. SK209-2-6]
gi|126718776|gb|EBA15488.1| ribosomal protein L28 [Roseobacter sp. SK209-2-6]
Length = 114
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Query: 28 ESLKKCVPDSRI-VMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIM 86
SL PD++ M+R R GK GN VS NKT+R + PN+ + L S +
Sbjct: 5 SSLSGAAPDTKDEPMSR--RCELTGKGPMTGNNVSH-ANNKTKRRFLPNLNDVTLQSETL 61
Query: 87 DRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
R I+++++ ALR +D GG+D +L K ++ T L K +I K
Sbjct: 62 GRGIKLRISAAALRSVDHRGGLDAFLAKAKDDELST-AALKVKKEIAK 108
>gi|338972203|ref|ZP_08627579.1| LSU ribosomal protein L28p [Bradyrhizobiaceae bacterium SG-6C]
gi|338234595|gb|EGP09709.1| LSU ribosomal protein L28p [Bradyrhizobiaceae bacterium SG-6C]
Length = 97
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G++VS +KT+R + PN+ L S + R++R++V+T+AL+ +D
Sbjct: 2 SRRCELTAKGPQVGHKVSHSN-HKTKRRFLPNLCNVTLISETLGRNVRLRVSTNALKSVD 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
GG+D +LLK + + + K +IEK
Sbjct: 61 HNGGLDAFLLKAKADNLSPK-AVELKRQIEK 90
>gi|339244857|ref|XP_003378354.1| asparaginyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
gi|316972747|gb|EFV56401.1| asparaginyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
Length = 852
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 26/150 (17%)
Query: 26 VKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTR------RNWKPNVQEK 79
++E L+ P + I A GL+ G+ I G ++S + R R W P + +K
Sbjct: 71 IREELEN-FPLAVIYPPEADLGLWGGEGIVKGYKLSNIPPRRKRFLPRLPRFWFPTLMKK 129
Query: 80 RLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLY--- 136
L+S I+D+++ V VT+ L+ ID+ G+D YLL+T + +++G K++++
Sbjct: 130 VLYSEILDKYMLVTVTSRTLQLIDENQGLDYYLLRTNEVDLCSKLG----CKLKRILLLA 185
Query: 137 ---EELGQTEVA---------FFTPEEEAK 154
+E GQ E A F PE EA+
Sbjct: 186 LARKEFGQPEKADELLEKYAEFVIPESEAE 215
>gi|414169085|ref|ZP_11424922.1| 50S ribosomal protein L28 [Afipia clevelandensis ATCC 49720]
gi|410885844|gb|EKS33657.1| 50S ribosomal protein L28 [Afipia clevelandensis ATCC 49720]
Length = 97
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G++VS +KT+R + PN+ L S + R++R++V+T+AL+ +D
Sbjct: 2 SRRCELTAKGPQVGHKVSHSN-HKTKRRFLPNLCNVTLISETLGRNVRLRVSTNALKSVD 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
GG+D +LLK + + + K +IEK
Sbjct: 61 HNGGLDAFLLKAKTDNLSPK-AVELKRQIEK 90
>gi|417860809|ref|ZP_12505864.1| 50S ribosomal protein L28 [Agrobacterium tumefaciens F2]
gi|338821213|gb|EGP55182.1| 50S ribosomal protein L28 [Agrobacterium tumefaciens F2]
Length = 90
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK +Q GN VS NKT+R + PN+ + L S + + R++V+ ALR ++ GG+D
Sbjct: 3 GKGVQTGNNVSH-ANNKTKRRFLPNLCQVTLISDALGQRFRLRVSAAALRSVEHRGGLDA 61
Query: 111 YLLKTPYHKMDTEMGLYWKTKIEKLYE 137
+LLK+ +++ L + +K E
Sbjct: 62 FLLKSGENELSMRARLLRRQIAKKTAE 88
>gi|440228113|ref|YP_007335204.1| 50S ribosomal protein L28 [Rhizobium tropici CIAT 899]
gi|440039624|gb|AGB72658.1| 50S ribosomal protein L28 [Rhizobium tropici CIAT 899]
Length = 99
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKT+R + PN+ + L S ++ + R++V+ ALR ++ GG+
Sbjct: 7 LTGKAVLVGNNVSH-ANNKTKRRFLPNLCQVTLISDVLGQRYRLRVSAAALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +L+K +++ L + ++K E
Sbjct: 66 DAFLIKASENELSMRARLLRRQIVKKSAE 94
>gi|301769583|ref|XP_002920238.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 256
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNR-VSEDGGNK-TRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++ GL+ G+ G+R ++ D +K ++ WKP + ++ L+S I+D
Sbjct: 65 VPIPIYYPPESQLGLWGGEGWILGHRYINNDKLSKRVKKVWKPQLFQRELYSEILDTKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G D Y+LKTP + ++ G+
Sbjct: 125 VTVTQRTLDLIDEAYGFDLYILKTPKEDLCSKFGM 159
>gi|304321693|ref|YP_003855336.1| 50S ribosomal protein L28 [Parvularcula bermudensis HTCC2503]
gi|303300595|gb|ADM10194.1| ribosomal protein L28 [Parvularcula bermudensis HTCC2503]
Length = 94
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
F GK G+ VS NKT+R ++PN+ + L S + R + ++T HALR +D GG+
Sbjct: 7 FTGKRPITGHNVSH-ANNKTKRRFEPNLCKVTLESERLSRRFKFRITAHALRSVDHVGGL 65
Query: 109 DEYLLK 114
D +LLK
Sbjct: 66 DAFLLK 71
>gi|325922641|ref|ZP_08184388.1| LSU ribosomal protein L28P [Xanthomonas gardneri ATCC 19865]
gi|325923804|ref|ZP_08185419.1| LSU ribosomal protein L28P [Xanthomonas gardneri ATCC 19865]
gi|325924285|ref|ZP_08185832.1| LSU ribosomal protein L28P [Xanthomonas gardneri ATCC 19865]
gi|325545234|gb|EGD16541.1| LSU ribosomal protein L28P [Xanthomonas gardneri ATCC 19865]
gi|325545737|gb|EGD16976.1| LSU ribosomal protein L28P [Xanthomonas gardneri ATCC 19865]
gi|325546876|gb|EGD17983.1| LSU ribosomal protein L28P [Xanthomonas gardneri ATCC 19865]
Length = 78
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
+GK +Q GN VS N+TRR + PN+ E+R + +R ++++V+ HALR IDK GID
Sbjct: 8 SGKSVQTGNNVSH-ANNRTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTIDK-NGID 65
Query: 110 EYL 112
L
Sbjct: 66 VVL 68
>gi|372279182|ref|ZP_09515218.1| 50S ribosomal protein L28 [Oceanicola sp. S124]
Length = 95
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS NKTRR + PN+ + L S + R+I+++++ ALR +D
Sbjct: 2 SRRCELTGKGPMTGNNVSH-ANNKTRRRFLPNLNDVSLRSEALGRNIKLRISASALRSVD 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKL 135
GG+D++L K ++ ++ L K +I K+
Sbjct: 61 HRGGLDKFLEKAKDAEL-SDTALKVKKEIAKV 91
>gi|414175657|ref|ZP_11430061.1| 50S ribosomal protein L28 [Afipia broomeae ATCC 49717]
gi|410889486|gb|EKS37289.1| 50S ribosomal protein L28 [Afipia broomeae ATCC 49717]
Length = 97
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G++VS +KT+R + PN+ L S + R++R++V+T+AL+ +D
Sbjct: 2 SRRCELTAKGPQVGHKVSHSN-HKTKRRFLPNLCNVTLISETLGRNVRLRVSTNALKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +LLK
Sbjct: 61 HNGGLDAFLLK 71
>gi|255724426|ref|XP_002547142.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135033|gb|EER34587.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 266
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 46 RGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKA 105
RGL+ G + + SE NKT R+ KPN +L+S +++ +R+KV L+ I K
Sbjct: 91 RGLYGGLQRKSSKKCSE-FLNKTLRSHKPNAVWTKLWSETLNKKLRLKVAVKVLKTISKE 149
Query: 106 GGIDEYLLKTPYHKMDTEMGL-YWKTKIEKL 135
GG+D YLLK+ ++ T MGL W+ + E L
Sbjct: 150 GGLDAYLLKSTPGRIKT-MGLKAWQLRYELL 179
>gi|62858289|ref|NP_001016451.1| mitochondrial ribosomal protein L28 [Xenopus (Silurana) tropicalis]
gi|213624104|gb|AAI70649.1| mitochondrial ribosomal protein L28 [Xenopus (Silurana) tropicalis]
gi|213627055|gb|AAI70655.1| mitochondrial ribosomal protein L28 [Xenopus (Silurana) tropicalis]
Length = 254
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP A +GL+ G+ G R + + + ++ WKP + + L S I+D+
Sbjct: 65 VPILPYFPPEADKGLWGGEGWVTGYRYANNDKLSARVKKVWKPQLFTRELHSEILDKTFS 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+ VT L ID A G D Y+LKTP ++++ G+
Sbjct: 125 ITVTMRTLDLIDAAYGFDFYILKTPKEDLNSKFGM 159
>gi|418940240|ref|ZP_13493612.1| 50S ribosomal protein L28 [Rhizobium sp. PDO1-076]
gi|375053029|gb|EHS49436.1| 50S ribosomal protein L28 [Rhizobium sp. PDO1-076]
Length = 96
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q GN VS NKT+R + PN+ + L S +++ R++V+ ALR ++ GG+
Sbjct: 7 LTGKGVQSGNNVSH-ANNKTKRRFLPNLCDVTLISDALNQRYRLRVSAAALRTVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEK 134
D +L+K ++ L + ++K
Sbjct: 66 DAFLIKASETELSMRARLLRRQIVKK 91
>gi|383318326|ref|YP_005379168.1| 50S ribosomal protein L28 [Frateuria aurantia DSM 6220]
gi|379045430|gb|AFC87486.1| ribosomal protein L28 [Frateuria aurantia DSM 6220]
Length = 78
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK +Q GN VS NKTRR W PN+ E+R + +R I+++V+ ALR IDK G
Sbjct: 7 VTGKGVQSGNNVSH-ANNKTRRRWLPNLHERRFWVASENRWIKLRVSNKALRTIDKNG 63
>gi|84499546|ref|ZP_00997834.1| ribosomal protein L28 [Oceanicola batsensis HTCC2597]
gi|84392690|gb|EAQ04901.1| ribosomal protein L28 [Oceanicola batsensis HTCC2597]
Length = 95
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS NKTRR + PN+ + L S + R+I+++++ ALR +D
Sbjct: 2 SRRCELTGKGPMTGNNVSH-ANNKTRRRFLPNLNDVSLRSEALGRNIKLRISAAALRTVD 60
Query: 104 KAGGIDEYLLK 114
GG+D++L K
Sbjct: 61 HRGGLDKFLAK 71
>gi|395781399|ref|ZP_10461817.1| 50S ribosomal protein L28 [Bartonella rattimassiliensis 15908]
gi|395420832|gb|EJF87090.1| 50S ribosomal protein L28 [Bartonella rattimassiliensis 15908]
Length = 97
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + +GN VS NKTRR + PN+ L S ++ + R++++ ALR ++ GG+
Sbjct: 7 LTGKAVLYGNNVSH-ANNKTRRRFLPNLCNVTLISEVLQQSYRLRISASALRSVEHRGGL 65
Query: 109 DEYLLKT 115
D +L+K
Sbjct: 66 DGFLIKA 72
>gi|339320324|ref|YP_004680019.1| 50S ribosomal protein L28 [Candidatus Midichloria mitochondrii
IricVA]
gi|338226449|gb|AEI89333.1| 50S ribosomal protein L28 [Candidatus Midichloria mitochondrii
IricVA]
Length = 102
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 37 SRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTT 96
SR+ + + +G ++ NR KTRR + PN+Q L+S ++R +R+ +TT
Sbjct: 2 SRVCNINGNKAVMSGNNVSHSNR-------KTRRRFLPNIQSFALWSDALNRVVRLYMTT 54
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIE 133
R ++ GID YLL T K+ T+ L K +I+
Sbjct: 55 SGARTVEHNNGIDNYLLSTANSKL-TKAALLIKKQIK 90
>gi|209551162|ref|YP_002283079.1| 50S ribosomal protein L28 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|424916572|ref|ZP_18339936.1| ribosomal protein L28 [Rhizobium leguminosarum bv. trifolii WSM597]
gi|226699153|sp|B5ZRX6.1|RL28_RHILW RecName: Full=50S ribosomal protein L28
gi|209536918|gb|ACI56853.1| ribosomal protein L28 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|392852748|gb|EJB05269.1| ribosomal protein L28 [Rhizobium leguminosarum bv. trifolii WSM597]
Length = 99
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKT+R + PN+ + L S +++ R++V+ ALR ++ GG+
Sbjct: 7 LTGKAVLTGNNVSH-ANNKTKRRFLPNLCQVTLISDALNQRYRLRVSAAALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +LLK ++ L + ++K E
Sbjct: 66 DAFLLKASETELSMRARLLRRQIVKKTAE 94
>gi|365893475|ref|ZP_09431650.1| 50S ribosomal protein L28 [Bradyrhizobium sp. STM 3843]
gi|365425777|emb|CCE04192.1| 50S ribosomal protein L28 [Bradyrhizobium sp. STM 3843]
Length = 102
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G++VS KT+R + PN+ S + R++R++V+T+A++ +D
Sbjct: 2 SRRCELTAKGPQVGHKVSHSNI-KTKRRFLPNLCNVTFISDALGRNVRLRVSTNAIKSVD 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEELGQTEVA 145
GG+D YLLK + + L K +IEK E T A
Sbjct: 61 HNGGLDAYLLKANAAAL-SPRALELKRQIEKKAAETAPTAKA 101
>gi|70943001|ref|XP_741599.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520081|emb|CAH84010.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 279
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHI-RVKVTT 96
R+ ++ GL+ + + +VS KTR KPNV +K + S I++ I V++TT
Sbjct: 39 RVPSAASQTGLYHDEDYNYYTKVSY-SLKKTRIKIKPNVFKKHIVSNILNTIIPSVRITT 97
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
AL ID AGG D Y+L+TP ++ + G
Sbjct: 98 SALHAIDDAGGFDNYILRTPPEELRSNFG 126
>gi|221059319|ref|XP_002260305.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
knowlesi strain H]
gi|193810378|emb|CAQ41572.1| hypothetical protein, conserved in Apicomplexan species [Plasmodium
knowlesi strain H]
Length = 281
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHI-RVKVTT 96
R+ ++ GL+ + + +VS KTR KPNV +K + S I++ I VKVTT
Sbjct: 39 RVPSAASQTGLYHDEDYNYYTKVSY-SLKKTRIKLKPNVFKKHIVSNILNTIIPNVKVTT 97
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
AL +D AGG D Y+L+TP ++ + G
Sbjct: 98 SALHAMDDAGGFDNYILRTPPEELRSNYG 126
>gi|221109905|ref|XP_002156837.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Hydra
magnipapillata]
Length = 172
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 67 KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
KT+R WKPNV E+ S +++ + T A+R ID AGG D Y+L+TP + + + +
Sbjct: 53 KTKRFWKPNVFEREYHSDLLNETVCYTFTMKAVRAIDYAGGFDNYILRTPDNVLVSNAAI 112
Query: 127 YWKTKIEKL 135
K K+E +
Sbjct: 113 ALKRKMETV 121
>gi|424886609|ref|ZP_18310217.1| ribosomal protein L28 [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393175960|gb|EJC76002.1| ribosomal protein L28 [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 99
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKT+R + PN+ + L S +++ R++V+ ALR ++ GG+
Sbjct: 7 LTGKAVLTGNNVSH-ANNKTKRRFLPNLCQVTLISDALNQRYRLRVSAAALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +L+K +++ L + ++K E
Sbjct: 66 DAFLIKASENELSMRARLLRRQIVKKTAE 94
>gi|86359399|ref|YP_471291.1| 50S ribosomal protein L28 [Rhizobium etli CFN 42]
gi|421589447|ref|ZP_16034588.1| 50S ribosomal protein L28 [Rhizobium sp. Pop5]
gi|123510611|sp|Q2K3M2.1|RL28_RHIEC RecName: Full=50S ribosomal protein L28
gi|86283501|gb|ABC92564.1| 50S ribosomal protein L28 [Rhizobium etli CFN 42]
gi|403705603|gb|EJZ21148.1| 50S ribosomal protein L28 [Rhizobium sp. Pop5]
Length = 98
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKT+R + PN+ + L S +++ R++V+ ALR ++ GG+
Sbjct: 7 LTGKAVLTGNNVSH-ANNKTKRRFLPNLCQVTLISDALNQRYRLRVSAAALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +L+K +++ L + ++K E
Sbjct: 66 DAFLIKASENELSMRARLLRRQIVKKTAE 94
>gi|432098922|gb|ELK28412.1| 39S ribosomal protein L28, mitochondrial [Myotis davidii]
Length = 259
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
++RGL+ G+ G+R + + ++ WKP + E+ L+S I+D+ V VT L
Sbjct: 75 SQRGLWGGEGWILGHRYVNNHKLSKRVKKVWKPQLFERELYSEILDKKFSVTVTMRTLDL 134
Query: 102 IDKAGGIDEYLLK---TPYHKMDTEMGL 126
ID+A G D Y+LK TP + ++ G+
Sbjct: 135 IDEAYGFDFYILKARGTPKEDLCSKFGM 162
>gi|389656449|gb|ADD39722.2| mitochondrial ribosomal protein L28 [Trichinella spiralis]
gi|389656451|gb|ADD39723.2| mitochondrial ribosomal protein L28 [Trichinella spiralis]
Length = 276
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 28/151 (18%)
Query: 26 VKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTR--------RNWKPNVQ 77
++E L+ P + I A GL+ G+ I G ++S + R R W P +
Sbjct: 71 IREELEN-FPLAVIYPPEADLGLWGGEGIVKGYKLSNIPPRRKRFLPRFWLPRFWFPTLM 129
Query: 78 EKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLY- 136
+K L+S I+D+++ V VT+ L+ ID+ G+D YLL+T + +++G K++++
Sbjct: 130 KKVLYSEILDKYMLVTVTSRTLQLIDENQGLDYYLLRTNEVDLCSKLG----CKLKRILL 185
Query: 137 -----EELGQTEVA---------FFTPEEEA 153
+E GQ E A F PE EA
Sbjct: 186 LALARKEFGQPEKADELLEKYAEFVIPESEA 216
>gi|357416108|ref|YP_004929128.1| 50S ribosomal protein L28 [Pseudoxanthomonas spadix BD-a59]
gi|355333686|gb|AER55087.1| 50S ribosomal protein L28 [Pseudoxanthomonas spadix BD-a59]
Length = 78
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
+GK + GN VS NKTRR + PN+ E+R + +R +++KV+ H+LR IDK GID
Sbjct: 8 SGKRVMTGNNVSH-ANNKTRRRFLPNLHERRFWVASENRWVKLKVSAHSLRTIDK-NGID 65
Query: 110 EYL 112
L
Sbjct: 66 SVL 68
>gi|406707917|ref|YP_006758269.1| 50S ribosomal protein L28 [alpha proteobacterium HIMB59]
gi|406653693|gb|AFS49092.1| LSU ribosomal protein L28P [alpha proteobacterium HIMB59]
Length = 97
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK Q G+ VS KT+R + N+ LFS + R R ++ + LR IDK GG+
Sbjct: 7 ITGKKHQTGHNVSHSNI-KTKRRFMVNLNNVTLFSESLKRKFRFRIASSTLRTIDKHGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEK 134
D+YL KT ++ T+ L K +IEK
Sbjct: 66 DQYLNKTSS-RLLTDKALKLKKQIEK 90
>gi|426254147|ref|XP_004020745.1| PREDICTED: 39S ribosomal protein L28, mitochondrial [Ovis aries]
Length = 256
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 47 GLFAGKHIQFGNR-VSEDGGNK-TRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDK 104
GL+ G+ G+R V+ D +K ++ WKP + ++ L+S I+D V VT L ID+
Sbjct: 78 GLWGGEGWLKGHRYVNNDKFSKRVKKVWKPQLFQRELYSEILDTRFTVTVTMRTLDLIDE 137
Query: 105 AGGIDEYLLKTPYHKMDTEMGL 126
A G D Y+LKTP + ++ G+
Sbjct: 138 AYGFDFYILKTPKEDLCSKFGM 159
>gi|163852395|ref|YP_001640438.1| 50S ribosomal protein L28 [Methylobacterium extorquens PA1]
gi|218531154|ref|YP_002421970.1| 50S ribosomal protein L28 [Methylobacterium extorquens CM4]
gi|240139729|ref|YP_002964206.1| 50S ribosomal protein L28 [Methylobacterium extorquens AM1]
gi|254562142|ref|YP_003069237.1| 50S ribosomal protein L28 [Methylobacterium extorquens DM4]
gi|418059365|ref|ZP_12697316.1| 50S ribosomal protein L28 [Methylobacterium extorquens DSM 13060]
gi|226732834|sp|A9W6T5.1|RL28_METEP RecName: Full=50S ribosomal protein L28
gi|254801367|sp|B7KT12.1|RL28_METC4 RecName: Full=50S ribosomal protein L28
gi|163664000|gb|ABY31367.1| ribosomal protein L28 [Methylobacterium extorquens PA1]
gi|218523457|gb|ACK84042.1| ribosomal protein L28 [Methylobacterium extorquens CM4]
gi|240009703|gb|ACS40929.1| 50S ribosomal protein L28 [Methylobacterium extorquens AM1]
gi|254269420|emb|CAX25386.1| 50S ribosomal protein L28 [Methylobacterium extorquens DM4]
gi|373567113|gb|EHP93091.1| 50S ribosomal protein L28 [Methylobacterium extorquens DSM 13060]
Length = 101
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK +Q G+ VS KT+ + PN+ L S ++R +R++VT HALR ++
Sbjct: 2 SRRCELTGKAVQVGHLVSHSN-RKTKCRFLPNLCNVTLQSDTLNRRVRLRVTAHALRSVE 60
Query: 104 KAGGIDEYLLK 114
GG+D +L+K
Sbjct: 61 HRGGLDAFLVK 71
>gi|114050843|ref|NP_001039461.1| 39S ribosomal protein L28, mitochondrial precursor [Bos taurus]
gi|122135757|sp|Q2HJJ1.1|RM28_BOVIN RecName: Full=39S ribosomal protein L28, mitochondrial;
Short=L28mt; Short=MRP-L28; Flags: Precursor
gi|88682857|gb|AAI05312.1| Mitochondrial ribosomal protein L28 [Bos taurus]
gi|296473443|tpg|DAA15558.1| TPA: 39S ribosomal protein L28, mitochondrial precursor [Bos
taurus]
Length = 256
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 47 GLFAGKHIQFGNR-VSEDGGNK-TRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDK 104
GL+ G+ G+R V+ D +K ++ WKP + ++ L+S I+D V VT L ID+
Sbjct: 78 GLWGGEGWLKGHRYVNNDKFSKRVKKVWKPQLFQRELYSEILDTRFTVTVTMRTLDLIDE 137
Query: 105 AGGIDEYLLKTPYHKMDTEMGL 126
A G D Y+LKTP + ++ G+
Sbjct: 138 AYGFDFYILKTPKEDLCSKFGM 159
>gi|410909856|ref|XP_003968406.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Takifugu
rubripes]
Length = 251
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 25/141 (17%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++ GL+ G+ G R + + N+ + WK + ++ L+S I+D
Sbjct: 64 VPVPIYYPPESQDGLWGGEGWISGYRYANNDKMSNRLPKTWKTQLFKRELYSEILDHKFT 123
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWK-------------------TKI 132
+ V+ AL ID A G D Y+LKTP +++++G+ K K
Sbjct: 124 ITVSARALDLIDAAYGFDFYILKTPKEDLNSKLGMDLKRAMLLRLSRRNTELYPDDPVKR 183
Query: 133 EKLYEELGQTEVAFFTPEEEA 153
EK+Y + Q E+ PEEEA
Sbjct: 184 EKVYNKYKQFEI----PEEEA 200
>gi|163759938|ref|ZP_02167022.1| 50S ribosomal protein L28 [Hoeflea phototrophica DFL-43]
gi|162282896|gb|EDQ33183.1| 50S ribosomal protein L28 [Hoeflea phototrophica DFL-43]
Length = 98
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q GN VS N+TRR + PN+ L S M + R++++ +ALR ++ GG+
Sbjct: 7 LTGKAVQSGNNVSH-ANNRTRRRFLPNLCNVTLISDAMGQRYRLRISANALRTVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGL---YWKTKIEKLYEE 138
D +L K D E+ + K +I K EE
Sbjct: 66 DAFLAKAK----DGELSMRARLLKRQIAKKLEE 94
>gi|73667160|ref|YP_303176.1| 50S ribosomal protein L28 [Ehrlichia canis str. Jake]
gi|123614861|sp|Q3YRS7.1|RL28_EHRCJ RecName: Full=50S ribosomal protein L28
gi|72394301|gb|AAZ68578.1| LSU ribosomal protein L28P [Ehrlichia canis str. Jake]
Length = 100
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G+ FGN+VS KT+R + N+ L S I++R + KV++ LR ID GG
Sbjct: 7 ITGQGKSFGNKVSH-SNRKTKRTYLVNLHNVTLLSDILNRKFKFKVSSRTLRTIDYKGGF 65
Query: 109 DEYLLKTPYHKM 120
D YLL T K+
Sbjct: 66 DLYLLNTSSRKL 77
>gi|321478309|gb|EFX89266.1| hypothetical protein DAPPUDRAFT_94742 [Daphnia pulex]
Length = 257
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%)
Query: 47 GLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GL+ G+ + G + + W P++ + L+S I+D+H+ + VT LR +D+
Sbjct: 69 GLWGGEALVRGFQKRNPLRRRAAHFWFPSLIKSVLYSEILDKHMEITVTPRTLRLVDQHY 128
Query: 107 GIDEYLLKTPYHKMDTEMGL 126
G D Y+L+TP + + +G+
Sbjct: 129 GFDSYILETPPQDLKSNLGV 148
>gi|374328427|ref|YP_005078611.1| 50S ribosomal protein L28 [Pseudovibrio sp. FO-BEG1]
gi|359341215|gb|AEV34589.1| Ribosomal protein L28 [Pseudovibrio sp. FO-BEG1]
Length = 98
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK + GN VS NK+RR + PN+ L S + +++++ HALR ++
Sbjct: 5 ARRCELTGKDVMTGNNVSH-ANNKSRRRFLPNLCNVSLMSDTLGETYKLRISAHALRSVE 63
Query: 104 KAGGIDEYLLK 114
GG+D +L+K
Sbjct: 64 HRGGLDAFLMK 74
>gi|352086119|ref|ZP_08953698.1| ribosomal protein L28 [Rhodanobacter sp. 2APBS1]
gi|389799211|ref|ZP_10202213.1| 50S ribosomal protein L28 [Rhodanobacter sp. 116-2]
gi|351679753|gb|EHA62887.1| ribosomal protein L28 [Rhodanobacter sp. 2APBS1]
gi|388443526|gb|EIL99672.1| 50S ribosomal protein L28 [Rhodanobacter sp. 116-2]
Length = 78
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK +Q GN VS N+TRR W PN+ E+R + +R I+++V+ +ALR IDK G
Sbjct: 7 VTGKGVQSGNNVSH-ANNRTRRRWLPNLHERRFWVPSENRWIKLRVSNNALRTIDKNG 63
>gi|188582402|ref|YP_001925847.1| 50S ribosomal protein L28 [Methylobacterium populi BJ001]
gi|226732836|sp|B1ZHJ4.1|RL28_METPB RecName: Full=50S ribosomal protein L28
gi|179345900|gb|ACB81312.1| ribosomal protein L28 [Methylobacterium populi BJ001]
Length = 101
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK +Q G+ VS KT+ + PN+ L S ++R +R++VT HALR ++
Sbjct: 2 SRRCELTGKAVQVGHLVSH-SNRKTKCRFLPNLCNVTLQSDALNRRVRLRVTAHALRSVE 60
Query: 104 KAGGIDEYLLK 114
GG+D +L+K
Sbjct: 61 HRGGLDAFLIK 71
>gi|254472185|ref|ZP_05085585.1| ribosomal protein L28 [Pseudovibrio sp. JE062]
gi|211958468|gb|EEA93668.1| ribosomal protein L28 [Pseudovibrio sp. JE062]
Length = 95
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK + GN VS NK+RR + PN+ L S + +++++ HALR ++
Sbjct: 2 ARRCELTGKDVMTGNNVSH-ANNKSRRRFLPNLCNVSLMSDTLGETYKLRISAHALRSVE 60
Query: 104 KAGGIDEYLLK 114
GG+D +L+K
Sbjct: 61 HRGGLDAFLMK 71
>gi|47196557|emb|CAF88924.1| unnamed protein product [Tetraodon nigroviridis]
Length = 157
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 65 GNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEM 124
+ ++ WKP + ++ L+S I+D + VT L ID A G D Y+LKTP +++++
Sbjct: 2 STRLKKTWKPQLFKRELYSEILDHKFTITVTARTLDLIDAAYGFDFYILKTPKEDLNSKL 61
Query: 125 GL 126
G+
Sbjct: 62 GM 63
>gi|357017047|gb|AET50552.1| hypothetical protein [Eimeria tenella]
Length = 282
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 67 KTRRNWKPNVQEKRLFSYIMDRHIR-VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
K RR KPNV +K S ++ ++ +KVTT AL ID AGG+DEYLL+TP +M + +G
Sbjct: 67 KHRRKLKPNVFKKDFESEGLNTTVKSLKVTTSALHAIDDAGGLDEYLLRTPPEEMRSVLG 126
>gi|227823244|ref|YP_002827216.1| 50S ribosomal protein L28 [Sinorhizobium fredii NGR234]
gi|254801373|sp|C3MHW1.1|RL28_RHISN RecName: Full=50S ribosomal protein L28
gi|227342245|gb|ACP26463.1| 50S ribosomal protein L28 [Sinorhizobium fredii NGR234]
Length = 96
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q G+ VS NKT+R + PN+ L S + + R++V+ ALR ++ GG+
Sbjct: 7 LTGKGVQSGHNVSH-ANNKTKRKFLPNLCNVTLISDALGQRFRLRVSAAALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +LLK +++ L + ++K E
Sbjct: 66 DAFLLKADENELSMRARLLRRQIVKKAAE 94
>gi|254461018|ref|ZP_05074434.1| ribosomal protein L28 [Rhodobacterales bacterium HTCC2083]
gi|206677607|gb|EDZ42094.1| ribosomal protein L28 [Rhodobacteraceae bacterium HTCC2083]
Length = 95
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS N+TRR + PN+ + L S I+ R I++K+ ALR +D
Sbjct: 2 SRRCELTGKGPMTGNNVSH-AKNRTRRRFLPNLNDVTLQSEILGRGIKLKICAAALRTVD 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
GG+D++ K+ ++ ++ L K +I K
Sbjct: 61 HRGGLDQFFAKSKDSEL-SDSALKVKKEIAK 90
>gi|407787438|ref|ZP_11134579.1| 50S ribosomal protein L28 [Celeribacter baekdonensis B30]
gi|407199716|gb|EKE69731.1| 50S ribosomal protein L28 [Celeribacter baekdonensis B30]
Length = 95
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS N+TRR + PN+ E L S + R +++++ ALR +D
Sbjct: 2 SRRCELTGKGPMSGNNVSH-AKNRTRRRFLPNLNEMSLISETLGRSFKLRISAAALRTVD 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
GG+D +L K ++ ++ L K +I+K
Sbjct: 61 HRGGLDAFLAKAKDEEL-SDSALKIKKEIKK 90
>gi|319781255|ref|YP_004140731.1| 50S ribosomal protein L28 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167143|gb|ADV10681.1| ribosomal protein L28 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 98
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
K + GN VS NKT+R + PN+ L S +++++R++++ +ALR ++ GG+
Sbjct: 7 LTAKAVMSGNNVSH-ANNKTKRRFLPNLVNVTLISEALNQNVRLRISANALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
D +L K ++ L K +K E+
Sbjct: 66 DAFLAKADVKELSQRARLLKKQIAKKTAEQ 95
>gi|350399652|ref|XP_003485601.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Bombus
impatiens]
Length = 271
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
VP + GL+ G+ I G + R W P +++ ++S ++D++I V
Sbjct: 70 VPLPLLYPKEFHEGLWGGEAIIQGFTKKHKYARRYPRFWFPTLKKSVVYSEVLDKYISVV 129
Query: 94 VTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
VT + I++ G D YLLKTP + +E+ L
Sbjct: 130 VTNRTIDLINEHYGFDHYLLKTPACDLKSELAL 162
>gi|444727251|gb|ELW67752.1| Transmembrane protein 8A [Tupaia chinensis]
Length = 1040
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 20 KNLAPGVKESLKKCVPDSRIVMNRAKRGLFAGKHIQFGNR-VSEDG-GNKTRRNWKPNVQ 77
+N G +E ++ VP ++RGL+ G+ G+R V D + ++ WKP +
Sbjct: 791 RNPESGQRERVQD-VPIPVYYPPESQRGLWGGEGWILGHRYVGHDKLSKRVKKVWKPQLF 849
Query: 78 EKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
E++L+S I+D+ V VT L ID+A G D Y+LK
Sbjct: 850 ERQLYSEILDQAFTVAVTERTLHLIDEAYGFDFYILK 886
>gi|51473250|ref|YP_067007.1| 50S ribosomal protein L28 [Rickettsia typhi str. Wilmington]
gi|383752024|ref|YP_005427124.1| 50S ribosomal protein L28 [Rickettsia typhi str. TH1527]
gi|383842859|ref|YP_005423362.1| 50S ribosomal protein L28 [Rickettsia typhi str. B9991CWPP]
gi|67461384|sp|Q68XW7.1|RL28_RICTY RecName: Full=50S ribosomal protein L28
gi|51459562|gb|AAU03525.1| 50S ribosomal protein L28 [Rickettsia typhi str. Wilmington]
gi|380758667|gb|AFE53902.1| 50S ribosomal protein L28 [Rickettsia typhi str. TH1527]
gi|380759506|gb|AFE54740.1| 50S ribosomal protein L28 [Rickettsia typhi str. B9991CWPP]
Length = 97
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G + +GN VS KTRR ++PN++ + S I D R+ V +R ++KAGG
Sbjct: 7 LTGVSVLYGNNVSH-SQRKTRRRFEPNLRSVKFRSDITDEVYRLSVNARCIRSVEKAGGF 65
Query: 109 DEYLLK 114
DEY+LK
Sbjct: 66 DEYILK 71
>gi|218682995|ref|ZP_03530596.1| 50S ribosomal protein L28 [Rhizobium etli CIAT 894]
Length = 98
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKT+R + PN+ + L S +++ R++V+ ALR ++ GG+
Sbjct: 7 LTGKAVLTGNNVSH-ANNKTKRRFLPNLCQVTLISDALNQRYRLRVSAAALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEK 134
D +L+K +++ L + ++K
Sbjct: 66 DAFLIKASENELSMRARLLRRQIVKK 91
>gi|148559224|ref|YP_001259829.1| 50S ribosomal protein L28 [Brucella ovis ATCC 25840]
gi|166226549|sp|A5VSY2.1|RL28_BRUO2 RecName: Full=50S ribosomal protein L28
gi|148370481|gb|ABQ60460.1| 50S ribosomal protein L28 [Brucella ovis ATCC 25840]
Length = 97
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q+GN VS N+TR + PN+ L S + + R++++ +ALR ++ GG+
Sbjct: 7 LTGKSVQYGNNVSH-ANNRTRCRFLPNLCNVTLISETLGQSYRLRISANALRSVEHRGGL 65
Query: 109 DEYLLKT 115
D +L+K+
Sbjct: 66 DAFLVKS 72
>gi|222087370|ref|YP_002545907.1| 50S ribosomal protein L28 [Agrobacterium radiobacter K84]
gi|398378768|ref|ZP_10536922.1| ribosomal protein L28 [Rhizobium sp. AP16]
gi|254801493|sp|B9JBS8.1|RL28_AGRRK RecName: Full=50S ribosomal protein L28
gi|221724818|gb|ACM27974.1| ribosomal protein L28 [Agrobacterium radiobacter K84]
gi|397724110|gb|EJK84586.1| ribosomal protein L28 [Rhizobium sp. AP16]
Length = 101
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKT+R + PN+ + L S ++ + R++V+ LR ++ GG+
Sbjct: 7 LTGKAVLVGNNVSH-ANNKTKRRFLPNLCQVTLISDVLGQRYRLRVSAAGLRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEK 134
D +LLK +++ L + I+K
Sbjct: 66 DAFLLKASENELSQRARLLRRQIIKK 91
>gi|86136561|ref|ZP_01055140.1| ribosomal protein L28 [Roseobacter sp. MED193]
gi|85827435|gb|EAQ47631.1| ribosomal protein L28 [Roseobacter sp. MED193]
Length = 96
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS N+TRR + PN+ + L S + R I++K++ ALR +D
Sbjct: 2 SRRCELTGKGPMTGNNVSH-AKNRTRRRFLPNLNDVTLQSETLGRGIKLKISAAALRTVD 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
GG+D +L K ++ T L K +I K
Sbjct: 61 HRGGLDAFLAKAKDEELSTA-ALKVKKEIAK 90
>gi|298293653|ref|YP_003695592.1| 50S ribosomal protein L28 [Starkeya novella DSM 506]
gi|296930164|gb|ADH90973.1| ribosomal protein L28 [Starkeya novella DSM 506]
Length = 102
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + GN VS KTRR + PN+ L S ++ R ++++V+ +AL+ +D
Sbjct: 2 SRRCELTGKAVLTGNLVSH-SNRKTRRRFLPNLVNVTLTSDVLKRSVKLRVSANALKTVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +L+K
Sbjct: 61 HRGGLDAFLIK 71
>gi|351711215|gb|EHB14134.1| 39S ribosomal protein L28, mitochondrial [Heterocephalus glaber]
Length = 264
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP +++GL+ G+ G R + + N+ ++ WKP + ++ L+S I+D+
Sbjct: 65 VPIPIYYPPESQKGLWGGEGWILGYRYANNDKLSNRVKKVWKPQLFQRELYSEILDKKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKT 115
V VT L ID+A G D Y+LK
Sbjct: 125 VAVTMRTLDLIDEAYGFDFYILKA 148
>gi|39933570|ref|NP_945846.1| 50S ribosomal protein L28 [Rhodopseudomonas palustris CGA009]
gi|192288924|ref|YP_001989529.1| 50S ribosomal protein L28 [Rhodopseudomonas palustris TIE-1]
gi|67461434|sp|Q6NCH9.1|RL28_RHOPA RecName: Full=50S ribosomal protein L28; AltName: Full=RRP-L28
gi|226699155|sp|B3QAG7.1|RL28_RHOPT RecName: Full=50S ribosomal protein L28
gi|39647416|emb|CAE25937.1| 50S ribosomal protein L28 [Rhodopseudomonas palustris CGA009]
gi|192282673|gb|ACE99053.1| ribosomal protein L28 [Rhodopseudomonas palustris TIE-1]
Length = 101
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G++VS KT+R + PN+ S + R +R++V+T+AL+ +D
Sbjct: 2 SRRCELTAKGAQVGHKVSHSN-IKTKRRFLPNLVNVTFLSDTLGRAVRLRVSTNALKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D YLLK
Sbjct: 61 HRGGLDAYLLK 71
>gi|399036440|ref|ZP_10733510.1| ribosomal protein L28 [Rhizobium sp. CF122]
gi|398065972|gb|EJL57578.1| ribosomal protein L28 [Rhizobium sp. CF122]
Length = 98
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKT+R + PN+ + L S + + R++V+ ALR ++ GG+
Sbjct: 7 LTGKAVLTGNNVSH-ANNKTKRRFLPNLCQVTLISDALGQRYRLRVSAAALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +L+K +++ L + ++K E
Sbjct: 66 DAFLIKASENELSMRARLLRRQIVKKTAE 94
>gi|149913435|ref|ZP_01901968.1| ribosomal protein L28 [Roseobacter sp. AzwK-3b]
gi|149812555|gb|EDM72384.1| ribosomal protein L28 [Roseobacter sp. AzwK-3b]
Length = 96
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 61 SEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
S NKT+R + PN+Q+ L S I++R ++++++ ALR +D GG+D +L K ++
Sbjct: 18 SSHANNKTKRRYLPNLQDVTLQSEILNRGVKLRISAAALRSVDHRGGLDAFLAKAKDEEL 77
Query: 121 DTEMGLYWKTKIEK 134
L K +I K
Sbjct: 78 SAN-ALKLKKEISK 90
>gi|146279144|ref|YP_001169303.1| 50S ribosomal protein L28 [Rhodobacter sphaeroides ATCC 17025]
gi|166226610|sp|A4WX84.1|RL28_RHOS5 RecName: Full=50S ribosomal protein L28
gi|145557385|gb|ABP71998.1| LSU ribosomal protein L28P [Rhodobacter sphaeroides ATCC 17025]
Length = 96
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
+GK GN VS NK+RR + PN+ + L S ++ + +++++ ALR +D GG+
Sbjct: 7 LSGKAPMTGNTVSH-ANNKSRRRFLPNLNDVTLISDVLGQSFKLRISAAALRTVDHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKL 135
D +L K ++ + L K +IEK+
Sbjct: 66 DAFLAKARDEELSLK-ALAIKKEIEKV 91
>gi|367476474|ref|ZP_09475854.1| 50S ribosomal protein L28 [Bradyrhizobium sp. ORS 285]
gi|365271229|emb|CCD88322.1| 50S ribosomal protein L28 [Bradyrhizobium sp. ORS 285]
Length = 102
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G++VS KT+R + PN+ S ++ R++R++V+T+A++ +D
Sbjct: 2 SRRCELTAKGPQVGHKVSHSNI-KTKRRFLPNLCNVTFISDVLGRNVRLRVSTNAIKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D YLLK
Sbjct: 61 HNGGLDAYLLK 71
>gi|302834607|ref|XP_002948866.1| hypothetical protein VOLCADRAFT_120673 [Volvox carteri f.
nagariensis]
gi|300266057|gb|EFJ50246.1| hypothetical protein VOLCADRAFT_120673 [Volvox carteri f.
nagariensis]
Length = 137
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 23 APGVKESLKKCVPDSRIVMNR---AKRGLFAGKHIQFGNRVSEDGGNKTRRN--WKPNVQ 77
A +E LK+ +P ++ R KR + G + Q RV + +K R P
Sbjct: 4 AASAQELLKRLIPPAQEAFARLQACKRKVIWGDN-QITLRVRQYPKSKDERVSLVMPQWH 62
Query: 78 EKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM--DTEMGLYW 128
+ L+S ++DR + + +T LR I+ GG+D YLLKTP K+ DT L W
Sbjct: 63 KVHLYSEVLDRKVPLTMTNSTLRMIEDMGGLDSYLLKTPESKLKSDTASALKW 115
>gi|294656483|ref|XP_458758.2| mitochondrial 54S ribosomal protein YmL24/YmL14 [Debaryomyces
hansenii CBS767]
gi|199431508|emb|CAG86902.2| DEHA2D06842p [Debaryomyces hansenii CBS767]
Length = 269
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 39 IVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHA 98
+ R RGL+ G + SE NK+ R KPN+ + +L+S +++ I +V+T
Sbjct: 88 MFFKRQNRGLYGGLQRKRSKTCSE-SKNKSLRAHKPNIVKAKLWSETLNKTIATRVSTTV 146
Query: 99 LRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
LR I + GG+D YLLK ++ T MGL
Sbjct: 147 LRTITREGGLDNYLLKDKPARVKT-MGL 173
>gi|217976519|ref|YP_002360666.1| 50S ribosomal protein L28 [Methylocella silvestris BL2]
gi|254801369|sp|B8EQN3.1|RL28_METSB RecName: Full=50S ribosomal protein L28
gi|217501895|gb|ACK49304.1| ribosomal protein L28 [Methylocella silvestris BL2]
Length = 96
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK +Q GN VS +KTR + PN+ L S ++ R +R +V ALR ++
Sbjct: 2 SRRCDLTGKAVQTGNLVSH-SNHKTRTRFLPNLCNVTLISDVLQRKVRFRVAVAALRSVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGL 126
GG+D +L K D E+ L
Sbjct: 61 HRGGLDAFLAKAD----DAELSL 79
>gi|399993581|ref|YP_006573821.1| 50S ribosomal protein L28 [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
gi|400755086|ref|YP_006563454.1| 50S ribosomal protein L28 [Phaeobacter gallaeciensis 2.10]
gi|398654239|gb|AFO88209.1| 50S ribosomal protein L28 [Phaeobacter gallaeciensis 2.10]
gi|398658136|gb|AFO92102.1| 50S ribosomal protein L28 [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 96
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS NKT+R + PN+ + L S ++R I+++++ ALR +D
Sbjct: 2 SRRCELTGKGPMTGNNVSH-ANNKTKRRFLPNLNDVTLQSETLNRGIKLRISAAALRTVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +L K
Sbjct: 61 HRGGLDAFLAK 71
>gi|56695875|ref|YP_166226.1| 50S ribosomal protein L28 [Ruegeria pomeroyi DSS-3]
gi|67461277|sp|Q5LUS9.1|RL28_SILPO RecName: Full=50S ribosomal protein L28
gi|56677612|gb|AAV94278.1| ribosomal protein L28 [Ruegeria pomeroyi DSS-3]
Length = 95
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS NKTRR + PN+ + L S + R ++++++ ALR +D
Sbjct: 2 SRRCELTGKGPMTGNNVSH-ANNKTRRRFLPNLNDVTLQSETLGRGVKLRISAAALRSVD 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
GG+D +L K + ++ L K +I K
Sbjct: 61 HRGGLDAFLAKAKDEDL-SDAALKVKKEIAK 90
>gi|189184694|ref|YP_001938479.1| 50S ribosomal protein L28 [Orientia tsutsugamushi str. Ikeda]
gi|226699054|sp|B3CV48.1|RL28_ORITI RecName: Full=50S ribosomal protein L28
gi|189181465|dbj|BAG41245.1| 50S ribosomal protein L28 [Orientia tsutsugamushi str. Ikeda]
Length = 95
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G +Q G+ VS KT+R + PN+Q LFS + + + KV A+R +DK GG+
Sbjct: 7 LTGVSVQSGHNVSH-SQRKTKRKFLPNLQNVSLFSDSLKKAFKFKVVARAMRTLDKVGGL 65
Query: 109 DEYLL 113
D YLL
Sbjct: 66 DCYLL 70
>gi|414165033|ref|ZP_11421280.1| 50S ribosomal protein L28 [Afipia felis ATCC 53690]
gi|410882813|gb|EKS30653.1| 50S ribosomal protein L28 [Afipia felis ATCC 53690]
Length = 97
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G+RVS KT+R + PN+ L S + + +R++V+T+AL+ +D
Sbjct: 2 SRRCELTAKGPQVGHRVSHSNI-KTKRRFLPNLCNVTLISETLGQSVRLRVSTNALKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +LLK
Sbjct: 61 HNGGLDAFLLK 71
>gi|424897259|ref|ZP_18320833.1| ribosomal protein L28 [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393181486|gb|EJC81525.1| ribosomal protein L28 [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 99
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKT+R + PN+ + L S +++ R++V+ ALR ++ GG+
Sbjct: 7 LTGKAVLTGNNVSH-ANNKTKRRFLPNLCQVTLISDALNQRYRLRVSAAALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +L+K ++ L + ++K E
Sbjct: 66 DAFLIKANETELSMRARLLRRQIVKKTAE 94
>gi|378827226|ref|YP_005189958.1| 50S ribosomal protein L28 [Sinorhizobium fredii HH103]
gi|398354894|ref|YP_006400358.1| 50S ribosomal protein L28 [Sinorhizobium fredii USDA 257]
gi|365180278|emb|CCE97133.1| 50S ribosomal protein L28 [Sinorhizobium fredii HH103]
gi|390130220|gb|AFL53601.1| 50S ribosomal protein L28 [Sinorhizobium fredii USDA 257]
Length = 96
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q G+ VS NKT+R + PN+ L S + + R++V+ ALR ++ GG+
Sbjct: 7 LTGKGVQSGHNVSH-ANNKTKRKFLPNLCNVTLISDALGQRFRLRVSAAALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEK 134
D +LLK +++ L + ++K
Sbjct: 66 DAFLLKADENELSMRARLLRRQIVKK 91
>gi|296447501|ref|ZP_06889424.1| ribosomal protein L28 [Methylosinus trichosporium OB3b]
gi|296254968|gb|EFH02072.1| ribosomal protein L28 [Methylosinus trichosporium OB3b]
Length = 98
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK +Q GN VS KTR + PN+ L S + R +R++V+ ALR ++
Sbjct: 2 SRRCELTGKGVQTGNLVSHSN-RKTRTRFLPNLVNVTLASDALARSVRLRVSAAALRSVE 60
Query: 104 KAGGIDEYLLK 114
GG+D +LLK
Sbjct: 61 HRGGLDAFLLK 71
>gi|297182661|gb|ADI18819.1| ribosomal protein l28 [uncultured SAR11 cluster bacterium
HF4000_37C10]
Length = 108
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 41 MNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALR 100
+N +++ GK G++VS NKT+R + PN+++ S I+ R+I+++V+ ALR
Sbjct: 15 LNMSRKCELTGKSPLKGHKVSH-ANNKTKRKFFPNLKKVTFKSKILRRNIKLQVSNAALR 73
Query: 101 CIDKAGGIDEYLLKTPYHKMD 121
+D GG+D +L HK+
Sbjct: 74 TVDYKGGLDNFLKTVKTHKLS 94
>gi|83859714|ref|ZP_00953234.1| ribosomal protein L28 [Oceanicaulis sp. HTCC2633]
gi|83852073|gb|EAP89927.1| ribosomal protein L28 [Oceanicaulis sp. HTCC2633]
Length = 95
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKT 115
GN VS NKT+R + PN+ + L S + R R+++ ALR +D GG+D++LLK
Sbjct: 15 GNNVSH-ANNKTKRRFLPNLCQVTLASEALGRSFRLRIAAKALRSVDHVGGLDQFLLKA 72
>gi|299132820|ref|ZP_07026015.1| ribosomal protein L28 [Afipia sp. 1NLS2]
gi|298592957|gb|EFI53157.1| ribosomal protein L28 [Afipia sp. 1NLS2]
Length = 97
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G+RVS KT+R + PN+ L S + + +R++V+T+AL+ +D
Sbjct: 2 SRRCELTAKGPQVGHRVSHSNI-KTKRRFLPNLCNVTLISETLGQSVRLRVSTNALKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +LLK
Sbjct: 61 HNGGLDAFLLK 71
>gi|383768909|ref|YP_005447972.1| 50S ribosomal protein L28 [Bradyrhizobium sp. S23321]
gi|381357030|dbj|BAL73860.1| 50S ribosomal protein L28 [Bradyrhizobium sp. S23321]
Length = 103
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K GN+VS KT+R + PN+ S ++R++R++V+T+A++ +D
Sbjct: 2 SRRCELTAKGPLVGNKVSHSNI-KTKRRFLPNLVNITFISEALERNVRLRVSTNAVKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D YLLK
Sbjct: 61 HNGGLDAYLLK 71
>gi|241206565|ref|YP_002977661.1| 50S ribosomal protein L28 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|424872585|ref|ZP_18296247.1| ribosomal protein L28 [Rhizobium leguminosarum bv. viciae WSM1455]
gi|240860455|gb|ACS58122.1| ribosomal protein L28 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|393168286|gb|EJC68333.1| ribosomal protein L28 [Rhizobium leguminosarum bv. viciae WSM1455]
Length = 98
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKT+R + PN+ + L S +++ R++V+ ALR ++ GG+
Sbjct: 7 LTGKAVLTGNNVSH-ANNKTKRRFLPNLCQVTLISDALNQRYRLRVSAAALRTVEHRGGL 65
Query: 109 DEYLLKTPYHKMD 121
D +LLK +++
Sbjct: 66 DAFLLKASENELS 78
>gi|340027783|ref|ZP_08663846.1| 50S ribosomal protein L28 [Paracoccus sp. TRP]
Length = 91
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKTRR + PN+ E L S + R +++++ ALR +D GG+
Sbjct: 7 LTGKGPMSGNNVSH-ANNKTRRRFLPNLNEVSLLSEKLGRSFQLRISAAALRSVDHRGGL 65
Query: 109 DEYLLKT 115
D +L K
Sbjct: 66 DAFLAKA 72
>gi|84687464|ref|ZP_01015341.1| ribosomal protein L28 [Maritimibacter alkaliphilus HTCC2654]
gi|84664489|gb|EAQ10976.1| ribosomal protein L28 [Rhodobacterales bacterium HTCC2654]
Length = 95
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+ + L S + R I+ +++ ALR +D GG+
Sbjct: 7 LTGKGPATGNNVSH-ANNKTKRRFLPNLNDVSLVSETLGRPIKFRISASALRTVDHRGGL 65
Query: 109 DEYLLK 114
D++L K
Sbjct: 66 DKFLAK 71
>gi|114570840|ref|YP_757520.1| 50S ribosomal protein L28 [Maricaulis maris MCS10]
gi|122315437|sp|Q0AMB1.1|RL28_MARMM RecName: Full=50S ribosomal protein L28
gi|114341302|gb|ABI66582.1| LSU ribosomal protein L28P [Maricaulis maris MCS10]
Length = 94
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R G + GN VS NK+RR + PN+ + L S + R +++V ALR +D
Sbjct: 2 ARRCELTGTGVLTGNNVSH-AQNKSRRRFLPNLCDVTLASEKLGRGFKLRVAAKALRSVD 60
Query: 104 KAGGIDEYLLKTPYHKM 120
GG+D YLLK K+
Sbjct: 61 HVGGLDVYLLKARDEKL 77
>gi|254995116|ref|ZP_05277306.1| 50S ribosomal protein L28 (rpmB) [Anaplasma marginale str.
Mississippi]
gi|255004409|ref|ZP_05279210.1| 50S ribosomal protein L28 (rpmB) [Anaplasma marginale str.
Virginia]
Length = 103
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 55 QFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
FGNRVS KT+R++ N+ L S ++ R ++KV LR I+ GG D YLL
Sbjct: 13 SFGNRVSHSN-RKTKRSYLVNLHNVTLVSEVLGRKFKMKVAARTLRTINYKGGFDLYLLN 71
Query: 115 TPYHKMDTE 123
T K+ E
Sbjct: 72 TASRKLSDE 80
>gi|269958654|ref|YP_003328441.1| 50S ribosomal protein L28 [Anaplasma centrale str. Israel]
gi|269848483|gb|ACZ49127.1| 50S ribosomal protein L28 [Anaplasma centrale str. Israel]
Length = 117
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 55 QFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
FGNRVS KT+R++ N+ L S ++ R ++KV LR I+ GG D YLL
Sbjct: 27 SFGNRVSHSN-RKTKRSYLVNLHNVTLVSEVLGRKFKMKVAARTLRTINYKGGFDLYLLN 85
Query: 115 TPYHKMDTE 123
T K+ E
Sbjct: 86 TASRKLSDE 94
>gi|456358525|dbj|BAM92970.1| 50S ribosomal protein L28 [Agromonas oligotrophica S58]
Length = 102
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G++VS KT+R + PN+ S + R++R++V+T+AL+ +D
Sbjct: 2 SRRCELTAKGPQVGHKVSHSNI-KTKRRFLPNLCNVTFISDALGRNVRLRVSTNALKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D YLLK
Sbjct: 61 HNGGLDAYLLK 71
>gi|158422171|ref|YP_001523463.1| 50S ribosomal protein L28 [Azorhizobium caulinodans ORS 571]
gi|172048038|sp|A8IMG3.1|RL28_AZOC5 RecName: Full=50S ribosomal protein L28
gi|158329060|dbj|BAF86545.1| ribosomal protein L28 [Azorhizobium caulinodans ORS 571]
Length = 99
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + G+ VS KT+R + PN+ L S ++ R IRV+++ +AL+ +D
Sbjct: 2 SRRCDLTGKAVLTGHLVSH-SNRKTKRRFLPNLCNVTLQSDVLQRSIRVRISANALKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +LLK
Sbjct: 61 HRGGLDAFLLK 71
>gi|402489941|ref|ZP_10836734.1| 50S ribosomal protein L28 [Rhizobium sp. CCGE 510]
gi|401811280|gb|EJT03649.1| 50S ribosomal protein L28 [Rhizobium sp. CCGE 510]
Length = 101
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKT+R + PN+ + L S +++ R++V+ ALR ++ GG+
Sbjct: 7 LTGKAVLTGNNVSH-ANNKTKRRFLPNLCQVTLISDALNQRYRLRVSAAALRSVEHRGGL 65
Query: 109 DEYLLK 114
D +LLK
Sbjct: 66 DAFLLK 71
>gi|89055915|ref|YP_511366.1| 50S ribosomal protein L28 [Jannaschia sp. CCS1]
gi|122497849|sp|Q28LS1.1|RL28_JANSC RecName: Full=50S ribosomal protein L28
gi|88865464|gb|ABD56341.1| LSU ribosomal protein L28P [Jannaschia sp. CCS1]
Length = 96
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+ + L S ++DR + +++ ALR +D GG+
Sbjct: 7 LTGKGPMTGNNVSH-ANNKTKRRFLPNLSDVTLGSDLLDRRFKFRISNAALRTVDHRGGL 65
Query: 109 DEYLLKTPYHKMDT 122
D ++ K ++ T
Sbjct: 66 DAFMAKAKDDELST 79
>gi|395835647|ref|XP_003790787.1| PREDICTED: 39S ribosomal protein L28, mitochondrial [Otolemur
garnettii]
Length = 255
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP +++GL+ G+ G + + + + ++ WKP + ++ L+S I+D+
Sbjct: 65 VPIPIYFPPESQQGLWGGEGWILGYKYANNDKLSRRVKKVWKPQLFQRELYSEILDKKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
V VT L ID+A G D Y+LKT + ++ G+
Sbjct: 125 VTVTMRTLDLIDEAYGFDFYILKTSKEDLCSKFGM 159
>gi|89069017|ref|ZP_01156398.1| ribosomal protein L28 [Oceanicola granulosus HTCC2516]
gi|89045386|gb|EAR51451.1| ribosomal protein L28 [Oceanicola granulosus HTCC2516]
Length = 93
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS NKTRR + PN+Q+ L S ++ R + +V++ ALR +D
Sbjct: 2 SRRCELTGKGPMTGNNVSH-AHNKTRRRFLPNLQDVTLQSDVLGRSFKFRVSSAALRTVD 60
Query: 104 KAGGIDEYLLK 114
GG+D ++ +
Sbjct: 61 HRGGLDAFMAR 71
>gi|405380985|ref|ZP_11034818.1| ribosomal protein L28 [Rhizobium sp. CF142]
gi|397322453|gb|EJJ26858.1| ribosomal protein L28 [Rhizobium sp. CF142]
Length = 98
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKT+R + PN+ + L S + + R++V+ ALR ++ GG+
Sbjct: 7 LTGKAVLTGNNVSH-ANNKTKRRFLPNLCQVTLISDALGQRYRLRVSAAALRSVEHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYE 137
D +LLK ++ L + ++K E
Sbjct: 66 DAFLLKANEGELSMRARLLRRQIVKKTAE 94
>gi|148284100|ref|YP_001248190.1| 50S ribosomal protein L28 [Orientia tsutsugamushi str. Boryong]
gi|166226593|sp|A5CC87.1|RL28_ORITB RecName: Full=50S ribosomal protein L28
gi|146739539|emb|CAM79268.1| 50S ribosomal protein L28 [Orientia tsutsugamushi str. Boryong]
Length = 96
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G +Q G+ VS KT+R + PN+Q LFS + + + KV A+R +DK GG+
Sbjct: 7 LTGVSVQSGHNVSH-SQRKTKRKFLPNLQNVSLFSDSLKKAFKFKVVARAIRTLDKVGGL 65
Query: 109 DEYLL 113
D YLL
Sbjct: 66 DCYLL 70
>gi|84514439|ref|ZP_01001803.1| ribosomal protein L28 [Loktanella vestfoldensis SKA53]
gi|84511490|gb|EAQ07943.1| ribosomal protein L28 [Loktanella vestfoldensis SKA53]
Length = 95
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS N TRR + PN+Q+ L S ++ R ++K++ ALR +D
Sbjct: 2 SRRCELTGKGPMSGNNVSH-AKNHTRRRFLPNLQDVTLQSDVLGRSFKLKISNAALRTVD 60
Query: 104 KAGGIDEYLLK 114
GG+D ++ K
Sbjct: 61 HRGGLDAFMAK 71
>gi|389810439|ref|ZP_10205800.1| 50S ribosomal protein L28 [Rhodanobacter thiooxydans LCS2]
gi|388440902|gb|EIL97227.1| 50S ribosomal protein L28 [Rhodanobacter thiooxydans LCS2]
Length = 78
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK Q GN VS N+TRR W PN+ E+R + +R I+++V+ +ALR IDK G
Sbjct: 7 VTGKGAQSGNNVSH-ANNRTRRRWLPNLHERRFWVPSENRWIKLRVSNNALRTIDKNG 63
>gi|170750100|ref|YP_001756360.1| 50S ribosomal protein L28 [Methylobacterium radiotolerans JCM 2831]
gi|226732837|sp|B1LW27.1|RL28_METRJ RecName: Full=50S ribosomal protein L28
gi|170656622|gb|ACB25677.1| ribosomal protein L28 [Methylobacterium radiotolerans JCM 2831]
Length = 100
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK +Q G+ VS KT+ + PN+ L S + + +R++VT HALR ++
Sbjct: 2 ARRCELTGKAVQVGHLVSHSN-RKTKCRFLPNLCNVTLQSDALGKRVRLRVTAHALRSVE 60
Query: 104 KAGGIDEYLLK 114
GG+D +L+K
Sbjct: 61 HRGGLDAFLIK 71
>gi|389788627|ref|ZP_10195541.1| 50S ribosomal protein L28 [Rhodanobacter spathiphylli B39]
gi|388432642|gb|EIL89632.1| 50S ribosomal protein L28 [Rhodanobacter spathiphylli B39]
Length = 78
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK + GN VS N+TRR W PN+ E+R + +R I+++V+ +ALR IDK G
Sbjct: 7 VTGKGVMSGNNVSH-ANNRTRRRWLPNLHERRFWVASENRWIKLRVSNNALRTIDKNG 63
>gi|260431018|ref|ZP_05784989.1| 50S ribosomal protein L28 [Silicibacter lacuscaerulensis ITI-1157]
gi|260414846|gb|EEX08105.1| 50S ribosomal protein L28 [Silicibacter lacuscaerulensis ITI-1157]
Length = 106
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS NKT+R + PN+ + L S + R ++++++ ALR +D
Sbjct: 13 SRRCELTGKGPMTGNNVSH-ANNKTKRRFLPNLNDVTLQSETLGRGVKLRISAAALRSVD 71
Query: 104 KAGGIDEYLLK 114
GG+D +L K
Sbjct: 72 HRGGLDAFLAK 82
>gi|262201431|ref|YP_003272639.1| 50S ribosomal protein L28 [Gordonia bronchialis DSM 43247]
gi|262084778|gb|ACY20746.1| ribosomal protein L28 [Gordonia bronchialis DSM 43247]
Length = 78
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 56 FGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
FGNRVS KTRR W PN+Q +R + DRHI + V+ L+ ID+ G
Sbjct: 14 FGNRVSHSH-RKTRRRWNPNIQRRRFYIPAEDRHITLNVSAKGLKTIDRHG 63
>gi|86747672|ref|YP_484168.1| 50S ribosomal protein L28 [Rhodopseudomonas palustris HaA2]
gi|123293234|sp|Q2J2Q3.1|RL28_RHOP2 RecName: Full=50S ribosomal protein L28
gi|86570700|gb|ABD05257.1| LSU ribosomal protein L28P [Rhodopseudomonas palustris HaA2]
Length = 101
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K +Q G++VS KT+R + PN+ S + R +R++V+T+AL+ +D
Sbjct: 2 SRRCELTAKGVQTGHKVSHSN-IKTKRRFLPNLVNVTFLSDALGRPVRLRVSTNALKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +LLK
Sbjct: 61 HRGGLDAFLLK 71
>gi|324522525|gb|ADY48074.1| 39S ribosomal protein L28, partial [Ascaris suum]
Length = 305
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 72 WKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
W P +++ L+S I+DR++++ VT A R IDK GID YLL+TP + +++G
Sbjct: 132 WFPYLKQVVLYSEILDRYMKITVTERACRLIDKHFGIDFYLLETPEIDIASKLG 185
>gi|119606239|gb|EAW85833.1| mitochondrial ribosomal protein L28, isoform CRA_e [Homo sapiens]
Length = 290
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G + + + ++ WKP + E+ +S I+D+
Sbjct: 96 VPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFT 155
Query: 92 VKVTTHALRCIDKAGGIDEYLLK---TPYHKMDTEMGL 126
V VT L ID+A G+D Y+LK TP + ++ G+
Sbjct: 156 VTVTMRTLDLIDEAYGLDFYILKASGTPKEDLCSKFGM 193
>gi|340712607|ref|XP_003394847.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L28,
mitochondrial-like [Bombus terrestris]
Length = 271
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
VP + G++ G+ I G + W P +++ ++S ++D++I V
Sbjct: 70 VPLPLLYPKEFHEGIWGGEAIIQGFTKKHKFARRYPHFWFPTLKKSVVYSEVLDKYISVV 129
Query: 94 VTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
VT + I+ G D YLLKTP + + +E+ L
Sbjct: 130 VTNRTIDLINDHYGFDHYLLKTPAYDLKSELAL 162
>gi|393765515|ref|ZP_10354077.1| 50S ribosomal protein L28 [Methylobacterium sp. GXF4]
gi|392729097|gb|EIZ86400.1| 50S ribosomal protein L28 [Methylobacterium sp. GXF4]
Length = 100
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK +Q G+ VS +KT+ + PN+ L S + + +R+++T HALR ++
Sbjct: 2 ARRCELTGKAVQVGHLVSHSN-HKTKCRFLPNLCNVTLQSDALGKRVRLRITAHALRSVE 60
Query: 104 KAGGIDEYLLK 114
GG+D +L+K
Sbjct: 61 HRGGLDAFLVK 71
>gi|119385160|ref|YP_916216.1| 50S ribosomal protein L28 [Paracoccus denitrificans PD1222]
gi|166226595|sp|A1B4S6.1|RL28_PARDP RecName: Full=50S ribosomal protein L28
gi|119374927|gb|ABL70520.1| LSU ribosomal protein L28P [Paracoccus denitrificans PD1222]
Length = 91
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKTRR + PN+ E L S + R +++++ ALR +D GG+
Sbjct: 7 LTGKGPMSGNNVSH-ANNKTRRRFLPNLNEVSLLSEKLGRSYQLRISAAALRSVDHRGGL 65
Query: 109 DEYLLKT 115
D +L K
Sbjct: 66 DAFLAKA 72
>gi|260427227|ref|ZP_05781206.1| 50S ribosomal protein L28 [Citreicella sp. SE45]
gi|260421719|gb|EEX14970.1| 50S ribosomal protein L28 [Citreicella sp. SE45]
Length = 96
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK G+ VS NKT+R + PN+ + L S + R ++++++ ALR +D GG+
Sbjct: 7 LTGKGPMTGHNVSH-ANNKTKRRFLPNLNDVTLQSETLGRGVKLRISASALRSVDHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEELGQTEVA 145
D++L K DTE+ T KL +E+ + + A
Sbjct: 66 DKFLAKAK----DTELS----TNALKLKKEIAKAQAA 94
>gi|319788437|ref|YP_004147912.1| 50S ribosomal protein L28 [Pseudoxanthomonas suwonensis 11-1]
gi|317466949|gb|ADV28681.1| ribosomal protein L28 [Pseudoxanthomonas suwonensis 11-1]
Length = 78
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK +Q GN VS NKTRR + PN+ E+R + +R ++++V+ ALR IDK GID
Sbjct: 9 GKGVQTGNNVSH-ANNKTRRRFLPNLHERRFWVASENRWVKLRVSAAALRTIDK-NGIDS 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|431806475|ref|YP_007233376.1| 50S ribosomal protein L28 [Liberibacter crescens BT-1]
gi|430800450|gb|AGA65121.1| LSU ribosomal protein L28p [Liberibacter crescens BT-1]
Length = 96
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + G++VS NKT+R + PN+ L S I+ + +++++ ALR ++ GG+
Sbjct: 7 LTGKTVMSGHKVSH-ANNKTKRKFLPNLCNVTLMSDILGQSYQLRISAAALRSVEHNGGL 65
Query: 109 DEYLLKT 115
D +LLKT
Sbjct: 66 DNFLLKT 72
>gi|310816617|ref|YP_003964581.1| 50S ribosomal protein L28 [Ketogulonicigenium vulgare Y25]
gi|308755352|gb|ADO43281.1| 50S ribosomal protein L28 [Ketogulonicigenium vulgare Y25]
Length = 98
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS NKT+R + PN+Q+ L S ++ R ++V+ LR +D
Sbjct: 2 SRRCELTGKGPMVGNNVSH-ANNKTKRRFLPNLQDVTLQSDVLGRSFTLRVSAAGLRSVD 60
Query: 104 KAGGIDEYL 112
GG+D YL
Sbjct: 61 HRGGLDAYL 69
>gi|218661315|ref|ZP_03517245.1| 50S ribosomal protein L28 [Rhizobium etli IE4771]
Length = 85
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTP 116
GN VS NKT+R + PN+ + L S +++ R++V+ ALR ++ GG+D +LLK
Sbjct: 1 GNNVSH-ANNKTKRRFLPNLCQVTLISDALNQRYRLRVSAAALRSVEHRGGLDAFLLKAS 59
Query: 117 YHKMDTEMGLYWKTKIEKLYE 137
+++ L + ++K E
Sbjct: 60 ENELSMRARLLRRQIVKKTAE 80
>gi|254500400|ref|ZP_05112551.1| ribosomal protein L28, putative [Labrenzia alexandrii DFL-11]
gi|222436471|gb|EEE43150.1| ribosomal protein L28, putative [Labrenzia alexandrii DFL-11]
Length = 87
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTP 116
GN VS NK+RR + PN+ L S + ++KV+ HALR ++ GG+D YL+K
Sbjct: 3 GNNVSH-ANNKSRRRFLPNLCNVSLMSDTLGETFKLKVSAHALRSVEHRGGLDAYLMKAS 61
>gi|77462563|ref|YP_352067.1| 50S ribosomal protein L28 [Rhodobacter sphaeroides 2.4.1]
gi|126461497|ref|YP_001042611.1| 50S ribosomal protein L28 [Rhodobacter sphaeroides ATCC 17029]
gi|123592686|sp|Q3J4W8.1|RL28_RHOS4 RecName: Full=50S ribosomal protein L28
gi|166226609|sp|A3PHM3.1|RL28_RHOS1 RecName: Full=50S ribosomal protein L28
gi|77386981|gb|ABA78166.1| LSU ribosomal protein L28P [Rhodobacter sphaeroides 2.4.1]
gi|126103161|gb|ABN75839.1| LSU ribosomal protein L28P [Rhodobacter sphaeroides ATCC 17029]
Length = 96
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
+GK GN VS NK+RR + PN+ + L S ++ + +++++ ALR +D GG+
Sbjct: 7 LSGKAPMTGNTVSH-ANNKSRRRFLPNLNDVTLISDVLGQSFKLRISAAALRTVDHRGGL 65
Query: 109 DEYLLK 114
D +L K
Sbjct: 66 DAFLAK 71
>gi|406910398|gb|EKD50428.1| 50S ribosomal protein L28 [uncultured bacterium]
Length = 94
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 58 NRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPY 117
NRVS NKT+ +PN+QE+R + + +++++++ LR +DK GG+ YL+K
Sbjct: 16 NRVSH-ANNKTKHYQQPNIQERRFLIPELGQRVKIRISSRGLRTVDKHGGLSRYLVKANP 74
Query: 118 HKMDTEMGLYWKTKIEK 134
K+ + K I K
Sbjct: 75 EKLSANLQRVRKILISK 91
>gi|365878358|ref|ZP_09417836.1| 50S ribosomal protein L28 [Bradyrhizobium sp. ORS 375]
gi|365893048|ref|ZP_09431254.1| 50S ribosomal protein L28 [Bradyrhizobium sp. STM 3809]
gi|365293738|emb|CCD90367.1| 50S ribosomal protein L28 [Bradyrhizobium sp. ORS 375]
gi|365330806|emb|CCE03785.1| 50S ribosomal protein L28 [Bradyrhizobium sp. STM 3809]
Length = 102
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G++VS KT+R + PN+ S + R++R++V+T+A++ +D
Sbjct: 2 SRRCELTAKGPQVGHKVSHSNI-KTKRRFLPNLCNVTFISDALGRNVRLRVSTNAIKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D YLLK
Sbjct: 61 HNGGLDAYLLK 71
>gi|259419342|ref|ZP_05743259.1| 50S ribosomal protein L28 [Silicibacter sp. TrichCH4B]
gi|259345564|gb|EEW57418.1| 50S ribosomal protein L28 [Silicibacter sp. TrichCH4B]
Length = 96
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS NKT+R + PN+ + L S + R ++++++ ALR +D
Sbjct: 2 SRRCELTGKGPMTGNNVSH-ANNKTKRRFLPNLNDVTLQSETLGRGVKLRISAAALRSVD 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
GG+D +L K ++ ++ L K +I K
Sbjct: 61 HRGGLDAFLAKAKDAEL-SDAALKVKKEIAK 90
>gi|254440022|ref|ZP_05053516.1| ribosomal protein L28, putative [Octadecabacter antarcticus 307]
gi|198255468|gb|EDY79782.1| ribosomal protein L28, putative [Octadecabacter antarcticus 307]
Length = 96
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS N+TRR + PN+Q+ L S + R + +++ ALR +D
Sbjct: 2 SRRCELTGKGPMSGNNVSH-AKNRTRRRFLPNLQDVSLMSESLGRSFKFRISNAALRTVD 60
Query: 104 KAGGIDEYLLKT 115
GG+D + K+
Sbjct: 61 HRGGLDAFFAKS 72
>gi|307205008|gb|EFN83531.1| 39S ribosomal protein L28, mitochondrial [Harpegnathos saltator]
Length = 267
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
+P + G++ G+ I G + K W P++Q L+S ++D ++RV
Sbjct: 61 IPIPLMYSKEMHNGIWGGEAIIKGFKKKGKFKRKVAHFWLPDLQRSVLYSEVLDSYMRVV 120
Query: 94 VTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+T +R I + G D YLLKTP + + + L
Sbjct: 121 ITPRVIRLIHEHYGFDHYLLKTPACDLQSLLAL 153
>gi|99080512|ref|YP_612666.1| 50S ribosomal protein L28 [Ruegeria sp. TM1040]
gi|122398295|sp|Q1GIW2.1|RL28_SILST RecName: Full=50S ribosomal protein L28
gi|99036792|gb|ABF63404.1| LSU ribosomal protein L28P [Ruegeria sp. TM1040]
Length = 96
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS NKT+R + PN+ + L S + R ++++++ ALR +D
Sbjct: 2 SRRCELTGKGPMTGNNVSH-ANNKTKRRFLPNLNDVTLQSETLGRGVKLRISAAALRSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +L K
Sbjct: 61 HRGGLDAFLAK 71
>gi|115670844|ref|XP_787422.2| PREDICTED: 39S ribosomal protein L28, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 306
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSE-DGGNKTRRNWKPNVQEKRLFSYIMDRHIRV 92
VP A+ GL+ G+ G R S+ D G + + WK V ++L S I+D+ +
Sbjct: 91 VPIQAYYPPEARVGLWGGEGWVKGYRKSKGDRGVRLNKTWKTYVATRKLESEILDKKFEI 150
Query: 93 KVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
T + ID+A G D Y+L+TP +++ +G+
Sbjct: 151 PATNRVMDLIDEAYGFDFYILQTPAEDLNSLVGM 184
>gi|254780584|ref|YP_003064997.1| 50S ribosomal protein L28 [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040261|gb|ACT57057.1| 50S ribosomal protein L28 [Candidatus Liberibacter asiaticus str.
psy62]
Length = 97
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
K + GN+VS NKTRR + PN+ L S IM++ +++++ ALR +++ GG+
Sbjct: 7 LTKKTVMSGNKVSH-ANNKTRRRFLPNLCRITLISDIMEQKYQLRISKCALRSVERQGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
D +L + + M ++K+ E+
Sbjct: 66 DRFLSNSKKENLSARMRTLRSQILKKMSEK 95
>gi|401409634|ref|XP_003884265.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325118683|emb|CBZ54234.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 282
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 67 KTRRNWKPNVQEKRLFSYIMDRHI-RVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
+TRR KPNV + S +++ I V+VTT AL +D GG D Y+L+TP ++ + MG
Sbjct: 67 RTRRKLKPNVFRRTFTSSLLNVSIPNVRVTTSALHAMDDMGGFDAYILRTPPQELRSHMG 126
>gi|241729588|ref|XP_002404608.1| 39S ribosomal protein L28, putative [Ixodes scapularis]
gi|215505496|gb|EEC14990.1| 39S ribosomal protein L28, putative [Ixodes scapularis]
Length = 270
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 15/133 (11%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
+P I ++G++ G+ I G R + G + + + P ++ ++S I+D+++RV
Sbjct: 65 IPIPVIYPKECQQGIWGGEGIISGYRRRKYG--RYSKYFTPILKRGVVYSEILDKYMRVT 122
Query: 94 VTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKI------EKLY--EELGQTEVA 145
+T + I++ G D+Y+LKTP + +++ L + K+ + LY +E Q EV
Sbjct: 123 LTERTVLLINQNFGFDQYILKTPVQDLKSQLALDLRRKMLLALARKDLYHDDEKKQREVL 182
Query: 146 -----FFTPEEEA 153
F PEEEA
Sbjct: 183 EKYKEFIIPEEEA 195
>gi|148258718|ref|YP_001243303.1| 50S ribosomal protein L28 [Bradyrhizobium sp. BTAi1]
gi|166226547|sp|A5ETA3.1|RL28_BRASB RecName: Full=50S ribosomal protein L28
gi|146410891|gb|ABQ39397.1| LSU ribosomal protein L28P [Bradyrhizobium sp. BTAi1]
Length = 102
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G++VS KT+R + PN+ S + R++R++V+T+A++ +D
Sbjct: 2 SRRCELTAKGPQVGHKVSHSNI-KTKRRFLPNLCNVTFISDALGRNVRLRVSTNAIKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D YLLK
Sbjct: 61 HNGGLDAYLLK 71
>gi|262277628|ref|ZP_06055421.1| 50S ribosomal protein L28 [alpha proteobacterium HIMB114]
gi|262224731|gb|EEY75190.1| 50S ribosomal protein L28 [alpha proteobacterium HIMB114]
Length = 97
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK G++VS NKT+R + PN+++ L S ++ +++ +K++T AL+ +D GG+
Sbjct: 7 LTGKRPMSGHKVSH-ANNKTKRKFFPNLKKVSLKSELLKKNVSLKISTRALKAVDFRGGL 65
Query: 109 DEYLLK 114
D++L++
Sbjct: 66 DQFLIR 71
>gi|88657876|ref|YP_507300.1| 50S ribosomal protein L28 [Ehrlichia chaffeensis str. Arkansas]
gi|123493481|sp|Q2GGY3.1|RL28_EHRCR RecName: Full=50S ribosomal protein L28
gi|88599333|gb|ABD44802.1| 50S ribosomal protein L28 [Ehrlichia chaffeensis str. Arkansas]
Length = 100
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G+ FGN+VS KT+R + N+ L S I++R + KV++ LR ++ GG+
Sbjct: 7 ITGQGKSFGNKVSHSN-RKTKRAYLVNLHNVTLVSDILNRKFKFKVSSRTLRTVNYKGGL 65
Query: 109 DEYLLKTPYHKM 120
D YLL T K+
Sbjct: 66 DLYLLNTSSRKL 77
>gi|323137532|ref|ZP_08072609.1| ribosomal protein L28 [Methylocystis sp. ATCC 49242]
gi|322397158|gb|EFX99682.1| ribosomal protein L28 [Methylocystis sp. ATCC 49242]
Length = 97
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK +Q GN VS KTR + PN+ L S + R +R++++ ALR ++
Sbjct: 2 SRRCELTGKGVQTGNLVSHSN-RKTRTRFLPNLVNVTLASEALARSVRLRISAAALRSVE 60
Query: 104 KAGGIDEYLLK 114
GG+D +L+K
Sbjct: 61 HRGGLDAFLVK 71
>gi|254476141|ref|ZP_05089527.1| ribosomal protein L28 [Ruegeria sp. R11]
gi|214030384|gb|EEB71219.1| ribosomal protein L28 [Ruegeria sp. R11]
Length = 96
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS NKT+R + PN+ + L S + R ++++++ ALR +D
Sbjct: 2 SRRCELTGKGPMTGNNVSH-ANNKTKRRFLPNLNDVTLQSETLGRGVKLRISAAALRSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +L K
Sbjct: 61 HRGGLDAFLAK 71
>gi|67461310|sp|Q5PAC9.2|RL28_ANAMM RecName: Full=50S ribosomal protein L28
Length = 103
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 55 QFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
FGN+VS KT+R++ N+ L S ++ R ++KV LR I+ GG D YLL
Sbjct: 13 SFGNKVSHSN-RKTKRSYLVNLHNVTLVSEVLGRKFKMKVAARTLRTINYKGGFDLYLLN 71
Query: 115 TPYHKMDTE 123
T K+ E
Sbjct: 72 TASRKLSDE 80
>gi|374309044|ref|YP_005055474.1| 50S ribosomal protein L28 [Granulicella mallensis MP5ACTX8]
gi|358751054|gb|AEU34444.1| ribosomal protein L28 [Granulicella mallensis MP5ACTX8]
Length = 75
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK GN VS NKTRR W+PN+Q KR++ +R +R++V+ +R I
Sbjct: 2 AKVCPITGKRTVTGNNVSH-ANNKTRRRWEPNLQLKRIWIPSENRFVRMRVSARGIRTIQ 60
Query: 104 KAGGIDEYLLK 114
K GI+ LLK
Sbjct: 61 KL-GIEAALLK 70
>gi|316931526|ref|YP_004106508.1| 50S ribosomal protein L28 [Rhodopseudomonas palustris DX-1]
gi|315599240|gb|ADU41775.1| ribosomal protein L28 [Rhodopseudomonas palustris DX-1]
Length = 101
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G++VS KT+R + PN+ S + R +R++V+T+AL+ +D
Sbjct: 2 SRRCELTAKGAQVGHKVSHSN-IKTKRRFLPNLVNVTFQSDTLGRSVRLRVSTNALKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D YLLK
Sbjct: 61 HRGGLDAYLLK 71
>gi|254466084|ref|ZP_05079495.1| ribosomal protein L28 [Rhodobacterales bacterium Y4I]
gi|206686992|gb|EDZ47474.1| ribosomal protein L28 [Rhodobacterales bacterium Y4I]
Length = 84
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKT 115
GN VS NKT+R + PN+ + L S ++ R ++++++ ALR +D GG+D +L K
Sbjct: 3 GNNVSH-ANNKTKRRFLPNLNDVTLQSEVLGRGVKLRISAAALRSVDHRGGLDAFLAKA 60
>gi|255003282|ref|ZP_05278246.1| 50S ribosomal protein L28 (rpmB) [Anaplasma marginale str. Puerto
Rico]
Length = 117
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 55 QFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
FGN+VS KT+R++ N+ L S ++ R ++KV LR I+ GG D YLL
Sbjct: 27 SFGNKVSHSN-RKTKRSYLVNLHNVTLVSEVLGRKFKMKVAARTLRTINYKGGFDLYLLN 85
Query: 115 TPYHKMDTE 123
T K+ E
Sbjct: 86 TASRKLSDE 94
>gi|15837808|ref|NP_298496.1| 50S ribosomal protein L28 [Xylella fastidiosa 9a5c]
gi|28198400|ref|NP_778714.1| 50S ribosomal protein L28 [Xylella fastidiosa Temecula1]
gi|71276524|ref|ZP_00652799.1| Ribosomal protein L28 [Xylella fastidiosa Dixon]
gi|170729748|ref|YP_001775181.1| 50S ribosomal protein L28 [Xylella fastidiosa M12]
gi|182681042|ref|YP_001829202.1| 50S ribosomal protein L28 [Xylella fastidiosa M23]
gi|386084563|ref|YP_006000845.1| 50S ribosomal protein L28 [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|417558953|ref|ZP_12209912.1| Ribosomal protein L28 RpmB [Xylella fastidiosa EB92.1]
gi|54039156|sp|P66163.1|RL28_XYLFT RecName: Full=50S ribosomal protein L28
gi|54041855|sp|P66162.1|RL28_XYLFA RecName: Full=50S ribosomal protein L28
gi|226699186|sp|B2I8L7.1|RL28_XYLF2 RecName: Full=50S ribosomal protein L28
gi|226699187|sp|B0U5P7.1|RL28_XYLFM RecName: Full=50S ribosomal protein L28
gi|9106178|gb|AAF84016.1|AE003954_13 50S ribosomal protein L28 [Xylella fastidiosa 9a5c]
gi|28056470|gb|AAO28363.1| 50S ribosomal protein L28 [Xylella fastidiosa Temecula1]
gi|71162701|gb|EAO12428.1| Ribosomal protein L28 [Xylella fastidiosa Dixon]
gi|71729119|gb|EAO31243.1| Ribosomal protein L28 [Xylella fastidiosa Ann-1]
gi|71729505|gb|EAO31614.1| Ribosomal protein L28 [Xylella fastidiosa Ann-1]
gi|167964541|gb|ACA11551.1| 50S ribosomal protein L28 [Xylella fastidiosa M12]
gi|182631152|gb|ACB91928.1| ribosomal protein L28 [Xylella fastidiosa M23]
gi|307579510|gb|ADN63479.1| 50S ribosomal protein L28 [Xylella fastidiosa subsp. fastidiosa
GB514]
gi|338178535|gb|EGO81521.1| Ribosomal protein L28 RpmB [Xylella fastidiosa EB92.1]
Length = 78
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK +Q GN VS NKTRR + PN+ ++R + +R ++++V+T A+R IDK GI
Sbjct: 7 VTGKRVQTGNNVSH-ANNKTRRRFLPNLHKRRFWVASENRWVKLRVSTCAVRTIDK-NGI 64
Query: 109 DEYL 112
D L
Sbjct: 65 DAVL 68
>gi|389696056|ref|ZP_10183698.1| ribosomal protein L28 [Microvirga sp. WSM3557]
gi|388584862|gb|EIM25157.1| ribosomal protein L28 [Microvirga sp. WSM3557]
Length = 96
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + G+ VS KT+R + PN+ L S + R +R++V+ +ALR ++
Sbjct: 2 SRRCELTGKAVLSGHLVSHSN-RKTKRKFLPNLCNVTLQSDTLQRSVRLRVSANALRSVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
GG+D +L K ++ T L K +IEK
Sbjct: 61 HRGGLDAFLAKAKAGELSTT-ALAVKREIEK 90
>gi|254451826|ref|ZP_05065263.1| ribosomal protein L28 [Octadecabacter arcticus 238]
gi|198266232|gb|EDY90502.1| ribosomal protein L28 [Octadecabacter arcticus 238]
Length = 96
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS N+TRR + PN+Q+ L S + R + +++ ALR +D
Sbjct: 2 SRRCELTGKGPMSGNNVSH-AKNRTRRRFLPNLQDVSLMSDSLGRSFKFRISNAALRTVD 60
Query: 104 KAGGIDEYLLKT 115
GG+D + K+
Sbjct: 61 HRGGLDAFFAKS 72
>gi|188579179|ref|YP_001916108.1| 50S ribosomal protein L28 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188523631|gb|ACD61576.1| ribosomal protein L28 [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 72
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
+GK +Q GN VS N+TRR + PN+ E+R + +R ++++V+ HALR IDK GID
Sbjct: 2 SGKRVQTGNNVSH-ANNRTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTIDK-NGID 59
Query: 110 EYL 112
L
Sbjct: 60 AVL 62
>gi|124002613|ref|ZP_01687465.1| ribosomal protein L28 [Microscilla marina ATCC 23134]
gi|123991841|gb|EAY31228.1| ribosomal protein L28 [Microscilla marina ATCC 23134]
Length = 83
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK Q GN VS NKTRR + PN+Q+KR F I +KV+T A+R I+K GI+
Sbjct: 8 TGKRTQSGNNVSH-ANNKTRRKFYPNLQKKRFFLESKGEWITLKVSTQAIRTINKK-GIE 65
Query: 110 EYL 112
E L
Sbjct: 66 EVL 68
>gi|395211571|ref|ZP_10399377.1| 50S ribosomal protein L28 [Pontibacter sp. BAB1700]
gi|394457645|gb|EJF11766.1| 50S ribosomal protein L28 [Pontibacter sp. BAB1700]
Length = 79
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK +Q GN VS NKT+R + PN+Q+KR + D + +KV+T ALR I+K G
Sbjct: 7 LTGKRVQVGNNVSH-ANNKTKRKFYPNLQKKRFYIPEEDAWVTLKVSTSALRTINKNG 63
>gi|294678645|ref|YP_003579260.1| 50S ribosomal protein L28 [Rhodobacter capsulatus SB 1003]
gi|294477465|gb|ADE86853.1| 50S ribosomal protein L28 [Rhodobacter capsulatus SB 1003]
Length = 95
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN +S NKTRR + PN+ E L S ++ + +++V+ LR +D GG+
Sbjct: 7 LTGKGPMSGNNISH-ANNKTRRRFLPNLNEVTLISDVLGQSFQLRVSAAGLRTVDHRGGL 65
Query: 109 DEYLLK 114
D +L K
Sbjct: 66 DAFLAK 71
>gi|254511086|ref|ZP_05123153.1| ribosomal protein L28 [Rhodobacteraceae bacterium KLH11]
gi|346993638|ref|ZP_08861710.1| 50S ribosomal protein L28 [Ruegeria sp. TW15]
gi|221534797|gb|EEE37785.1| ribosomal protein L28 [Rhodobacteraceae bacterium KLH11]
Length = 95
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS N+TRR + PN+ + L S + R ++++++ ALR +D
Sbjct: 2 SRRCELTGKGPMTGNNVSH-AKNRTRRRFLPNLNDVTLQSETLGRGVKLRISAAALRSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +L K
Sbjct: 61 HRGGLDAFLAK 71
>gi|115522159|ref|YP_779070.1| 50S ribosomal protein L28 [Rhodopseudomonas palustris BisA53]
gi|122298122|sp|Q07VE4.1|RL28_RHOP5 RecName: Full=50S ribosomal protein L28
gi|115516106|gb|ABJ04090.1| LSU ribosomal protein L28P [Rhodopseudomonas palustris BisA53]
Length = 101
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G++VS KT+R + PN+ S + R +R++V+T+AL+ +D
Sbjct: 2 SRRCELTAKGAQVGHKVSH-SNIKTKRRFLPNLVNITFISDALGRQVRLRVSTNALKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +LLK
Sbjct: 61 HRGGLDGFLLK 71
>gi|237833967|ref|XP_002366281.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211963945|gb|EEA99140.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|221486504|gb|EEE24765.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221508273|gb|EEE33860.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 282
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 67 KTRRNWKPNVQEKRLFSYIMDRHI-RVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
+TRR KPNV + S +++ I V+VTT AL +D GG D Y+L+TP ++ + MG
Sbjct: 67 RTRRKIKPNVFRRTFTSSLLNVTIPNVRVTTSALHAMDDMGGFDAYILRTPPQELRSHMG 126
>gi|338741221|ref|YP_004678183.1| 50S ribosomal protein L28 [Hyphomicrobium sp. MC1]
gi|337761784|emb|CCB67619.1| 50S ribosomal protein L28 [Hyphomicrobium sp. MC1]
Length = 98
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 66 NKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
NKT+R ++PN+ L S ++ R +R++V+ AL+ ++ GG+D +LLK ++ ++
Sbjct: 23 NKTKRKFRPNLCNVTLMSDLLGRKVRLRVSARALKSVEHRGGLDAFLLKASNDEL-SQTC 81
Query: 126 LYWKTKIEKL 135
L K +I+K+
Sbjct: 82 LKLKREIQKV 91
>gi|291238881|ref|XP_002739345.1| PREDICTED: putative mitochondrial ribosomal protein L28-like
[Saccoglossus kowalevskii]
Length = 282
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 67 KTRRNWKPNVQEKRLFSYIMDRHI-RVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
+ R+ WKP V ++ +S I++R I + VT L IDK G D Y+LKTP + +++G
Sbjct: 105 RVRKIWKPQVFQRSFYSEILERDIGPIGVTLSTLDQIDKCCGFDFYILKTPREDLQSKLG 164
Query: 126 L 126
L
Sbjct: 165 L 165
>gi|68072487|ref|XP_678157.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56498535|emb|CAH93617.1| conserved hypothetical protein [Plasmodium berghei]
Length = 280
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHI-RVKVTT 96
R+ ++ GL+ + + +VS KTR KPNV +K + S I++ I V++TT
Sbjct: 39 RVPSAASQTGLYHDEDYNYYTKVSY-SLKKTRIKIKPNVFKKHIVSNILNTIIPSVRITT 97
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
AL ID AGG D Y+L+TP ++ + G
Sbjct: 98 -ALHAIDDAGGFDNYILRTPPEELRSNFG 125
>gi|85713780|ref|ZP_01044770.1| ribosomal protein L28 [Nitrobacter sp. Nb-311A]
gi|85699684|gb|EAQ37551.1| ribosomal protein L28 [Nitrobacter sp. Nb-311A]
Length = 97
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
G+RVS KT+R + PN+ S + +R +V+THALR +D GG D +LLK
Sbjct: 15 GHRVSH-SNIKTKRRFLPNLVNVTFVSDTLASSVRFRVSTHALRSVDHRGGFDAFLLK 71
>gi|441497343|ref|ZP_20979558.1| LSU ribosomal protein L28p [Fulvivirga imtechensis AK7]
gi|441438868|gb|ELR72197.1| LSU ribosomal protein L28p [Fulvivirga imtechensis AK7]
Length = 79
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK Q GN VS NKT+R + PN+Q+KR + D+ I +KV+T ALR I+K G
Sbjct: 7 ITGKRPQVGNNVSH-ANNKTKRRFNPNLQKKRFYIPEEDKWITLKVSTSALRTINKNG 63
>gi|146337760|ref|YP_001202808.1| 50S ribosomal protein L28 [Bradyrhizobium sp. ORS 278]
gi|166226548|sp|A4YKZ2.1|RL28_BRASO RecName: Full=50S ribosomal protein L28
gi|146190566|emb|CAL74568.1| 50S ribosomal protein L28 [Bradyrhizobium sp. ORS 278]
Length = 102
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G++VS KT+R + PN+ S + R++R++V+T+A++ +D
Sbjct: 2 SRRCELTAKGPQVGHKVSHSNI-KTKRRFLPNLCNVTFISDALGRNVRLRVSTNAIKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D YL+K
Sbjct: 61 HNGGLDAYLMK 71
>gi|281341549|gb|EFB17133.1| hypothetical protein PANDA_008919 [Ailuropoda melanoleuca]
Length = 266
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNR-VSEDGGNK-TRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++ GL+ G+ G+R ++ D +K ++ WKP + ++ L+S I+D
Sbjct: 65 VPIPIYYPPESQLGLWGGEGWILGHRYINNDKLSKRVKKVWKPQLFQRELYSEILDTKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLKT---PYHKMDTEMGLYWKTKIEKLYEELG 140
V VT L ID+A G D Y+LK P H W+T E L + G
Sbjct: 125 VTVTQRTLDLIDEAYGFDLYILKASRGPAHSTS------WQTPKEDLCSKFG 170
>gi|163747248|ref|ZP_02154603.1| ribosomal protein L28 [Oceanibulbus indolifex HEL-45]
gi|161379523|gb|EDQ03937.1| ribosomal protein L28 [Oceanibulbus indolifex HEL-45]
Length = 99
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS N+TRR + PN+ + L S + R +++++ ALR +D
Sbjct: 2 SRRCELTGKGPMTGNNVSH-ANNRTRRRFLPNLNDVSLQSEALGRAFKLRISAAALRTVD 60
Query: 104 KAGGIDEYLLK 114
GG+D++L K
Sbjct: 61 HRGGLDKFLAK 71
>gi|386399856|ref|ZP_10084634.1| ribosomal protein L28 [Bradyrhizobium sp. WSM1253]
gi|385740482|gb|EIG60678.1| ribosomal protein L28 [Bradyrhizobium sp. WSM1253]
Length = 103
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G+ VS KT+R + PN+ S + R++R++V+T+A++ +D
Sbjct: 2 SRRCELTAKGPQVGHTVSHSN-IKTKRRFLPNLVNVTFISEALGRNVRLRVSTNAIKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +LLK
Sbjct: 61 HNGGLDPFLLK 71
>gi|431906757|gb|ELK10878.1| Transmembrane protein 8A, partial [Pteropus alecto]
Length = 917
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 44 AKRGLFAGKHIQFGNR-VSEDG-GNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
++ GL+ G+ G+R V+ D + ++ WKP + ++ L+S I+D V VT L
Sbjct: 734 SQLGLWGGEGWILGHRYVNNDKLSKRVKKVWKPQLFQRELYSEILDTKFSVTVTMRTLDL 793
Query: 102 IDKAGGIDEYLLK--TPYHKMDTEMGL 126
ID+A G D Y+LK TP + ++ G+
Sbjct: 794 IDEAYGFDFYILKASTPKEDLCSKFGM 820
>gi|407798376|ref|ZP_11145283.1| ribosomal protein L28 [Oceaniovalibus guishaninsula JLT2003]
gi|407059337|gb|EKE45266.1| ribosomal protein L28 [Oceaniovalibus guishaninsula JLT2003]
Length = 95
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKTRR + PN+ + L S + R ++++++ ALR +D GG+
Sbjct: 7 LTGKGPMSGNNVSH-AHNKTRRRFLPNLNDVSLMSESLGRTVKLRISAAALRTVDHRGGL 65
Query: 109 DEYLLK 114
D ++ K
Sbjct: 66 DGFMAK 71
>gi|90422067|ref|YP_530437.1| 50S ribosomal protein L28 [Rhodopseudomonas palustris BisB18]
gi|122477466|sp|Q21BW8.1|RL28_RHOPB RecName: Full=50S ribosomal protein L28
gi|90104081|gb|ABD86118.1| LSU ribosomal protein L28P [Rhodopseudomonas palustris BisB18]
Length = 101
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G++VS KT+R + PN+ S + R +R++V+T+AL+ +D
Sbjct: 2 SRRCELTAKGAQVGHKVSHSN-IKTKRRFLPNLVNVTFLSDALGRPVRLRVSTNALKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +LLK
Sbjct: 61 HRGGLDGFLLK 71
>gi|56416932|ref|YP_154006.1| 50S ribosomal protein L28 [Anaplasma marginale str. St. Maries]
gi|222475298|ref|YP_002563715.1| 50S ribosomal protein L28 [Anaplasma marginale str. Florida]
gi|56388164|gb|AAV86751.1| 50S ribosomal protein L28 [Anaplasma marginale str. St. Maries]
gi|222419436|gb|ACM49459.1| 50S ribosomal protein L28 (rpmB) [Anaplasma marginale str. Florida]
Length = 134
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 55 QFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
FGN+VS KT+R++ N+ L S ++ R ++KV LR I+ GG D YLL
Sbjct: 44 SFGNKVSHSN-RKTKRSYLVNLHNVTLVSEVLGRKFKMKVAARTLRTINYKGGFDLYLLN 102
Query: 115 TPYHKMDTE 123
T K+ E
Sbjct: 103 TASRKLSDE 111
>gi|220924387|ref|YP_002499689.1| 50S ribosomal protein L28 [Methylobacterium nodulans ORS 2060]
gi|254801368|sp|B8ICZ4.1|RL28_METNO RecName: Full=50S ribosomal protein L28
gi|219948994|gb|ACL59386.1| ribosomal protein L28 [Methylobacterium nodulans ORS 2060]
Length = 96
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + G+ VS KT+R + PN+ + L S + R +R++++ +ALR ++
Sbjct: 2 SRRCELTGKAVLTGHLVSHSN-RKTKRRFLPNLCKVTLLSDTLGRSVRLRISANALRSVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEE 138
GG+D +L+K ++ L K +IEK E
Sbjct: 61 HRGGLDAFLVKAGEQELSQNARL-LKREIEKKLAE 94
>gi|91974765|ref|YP_567424.1| 50S ribosomal protein L28 [Rhodopseudomonas palustris BisB5]
gi|123722228|sp|Q13EG6.1|RL28_RHOPS RecName: Full=50S ribosomal protein L28
gi|91681221|gb|ABE37523.1| LSU ribosomal protein L28P [Rhodopseudomonas palustris BisB5]
Length = 101
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K +Q G++VS KT+R + PN+ S + R +R++V+T+AL+ +D
Sbjct: 2 SRRCELTAKGVQTGHKVSHSN-IKTKRRFLPNLVNVTFLSDALGRPVRLRVSTNALKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +L K
Sbjct: 61 HRGGLDAFLAK 71
>gi|358334801|dbj|GAA53241.1| 39S ribosomal protein L28 mitochondrial [Clonorchis sinensis]
Length = 322
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 39/58 (67%)
Query: 72 WKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWK 129
+ P + ++ +S I++R + + V+ ALR I+KAG +D Y+L TP ++++ +G++ K
Sbjct: 2 YPPKLSQQVFYSDILNRWMVIIVSETALRAIEKAGCLDAYILSTPAEQLNSRLGMHLK 59
>gi|390957926|ref|YP_006421683.1| 50S ribosomal protein L28 [Terriglobus roseus DSM 18391]
gi|390958269|ref|YP_006422026.1| 50S ribosomal protein L28 [Terriglobus roseus DSM 18391]
gi|390412844|gb|AFL88348.1| LSU ribosomal protein L28P [Terriglobus roseus DSM 18391]
gi|390413187|gb|AFL88691.1| ribosomal protein L28 [Terriglobus roseus DSM 18391]
Length = 73
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK GN+VS NKTRR W+PN+Q KR++ + +R++V+ LR I+
Sbjct: 2 AKVCPITGKRPMAGNKVSH-ANNKTRRRWEPNLQWKRIWVPSEKKFVRMRVSARGLRTIN 60
Query: 104 KAGGIDEYLLKT 115
K G++ LL+
Sbjct: 61 KL-GVEAALLQA 71
>gi|15603977|ref|NP_220492.1| 50S ribosomal protein L28 [Rickettsia prowazekii str. Madrid E]
gi|383486946|ref|YP_005404626.1| 50S ribosomal protein L28 [Rickettsia prowazekii str. GvV257]
gi|383487522|ref|YP_005405201.1| 50S ribosomal protein L28 [Rickettsia prowazekii str. Chernikova]
gi|383488368|ref|YP_005406046.1| 50S ribosomal protein L28 [Rickettsia prowazekii str. Katsinyian]
gi|383489211|ref|YP_005406888.1| 50S ribosomal protein L28 [Rickettsia prowazekii str. Dachau]
gi|383499346|ref|YP_005412707.1| 50S ribosomal protein L28 [Rickettsia prowazekii str. BuV67-CWPP]
gi|383500186|ref|YP_005413546.1| 50S ribosomal protein L28 [Rickettsia prowazekii str. RpGvF24]
gi|386081927|ref|YP_005998504.1| 50S ribosomal protein L28 [Rickettsia prowazekii str. Rp22]
gi|6225989|sp|Q9ZE48.1|RL28_RICPR RecName: Full=50S ribosomal protein L28
gi|3860668|emb|CAA14569.1| 50S RIBOSOMAL PROTEIN L28 (rpmB) [Rickettsia prowazekii str. Madrid
E]
gi|292571691|gb|ADE29606.1| 50S ribosomal protein L28 [Rickettsia prowazekii str. Rp22]
gi|380757311|gb|AFE52548.1| 50S ribosomal protein L28 [Rickettsia prowazekii str. GvV257]
gi|380757883|gb|AFE53119.1| 50S ribosomal protein L28 [Rickettsia prowazekii str. RpGvF24]
gi|380760401|gb|AFE48923.1| 50S ribosomal protein L28 [Rickettsia prowazekii str. Chernikova]
gi|380761247|gb|AFE49768.1| 50S ribosomal protein L28 [Rickettsia prowazekii str. Katsinyian]
gi|380762092|gb|AFE50612.1| 50S ribosomal protein L28 [Rickettsia prowazekii str. BuV67-CWPP]
gi|380762934|gb|AFE51453.1| 50S ribosomal protein L28 [Rickettsia prowazekii str. Dachau]
Length = 97
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G + +GN VS KTRR ++PN++ + S I D R+ V +R ++KAGG
Sbjct: 7 LTGVGVLYGNNVSH-SQRKTRRRFEPNLRSIKFRSDITDEVYRLSVNARCIRSVEKAGGF 65
Query: 109 DEYLLK 114
D Y+LK
Sbjct: 66 DAYILK 71
>gi|374572235|ref|ZP_09645331.1| ribosomal protein L28 [Bradyrhizobium sp. WSM471]
gi|374420556|gb|EHR00089.1| ribosomal protein L28 [Bradyrhizobium sp. WSM471]
Length = 103
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G+ VS KT+R + PN+ S + R++R++V+T+A++ +D
Sbjct: 2 SRRCELTAKGPQVGHTVSHSN-IKTKRRFLPNLVNVTFISEALGRNVRLRVSTNAIKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +LLK
Sbjct: 61 HNGGLDPFLLK 71
>gi|392397526|ref|YP_006434127.1| 50S ribosomal protein L28 [Flexibacter litoralis DSM 6794]
gi|390528604|gb|AFM04334.1| ribosomal protein L28 [Flexibacter litoralis DSM 6794]
Length = 88
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK Q GN VS NKT+R + PN+Q+KR + DR + +KV+T A+R I K G
Sbjct: 8 TGKRTQTGNNVSH-ANNKTKRCFYPNLQKKRFYIPEEDRFVTLKVSTSAIRTISKNG 63
>gi|402771618|ref|YP_006591155.1| 50S ribosomal protein L28 [Methylocystis sp. SC2]
gi|401773638|emb|CCJ06504.1| 50S ribosomal protein L28 [Methylocystis sp. SC2]
Length = 97
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK +Q GN VS KT+ + PN+ L S + R +R++++ ALR ++
Sbjct: 2 SRRCELTGKGVQSGNLVSHSN-RKTKTRFLPNLVNVTLASEALARSVRLRISAAALRSVE 60
Query: 104 KAGGIDEYLLKTPYHKMD 121
GG+D +L+K ++
Sbjct: 61 HRGGLDAFLVKAKSEELS 78
>gi|75674604|ref|YP_317025.1| 50S ribosomal protein L28 [Nitrobacter winogradskyi Nb-255]
gi|123614188|sp|Q3SVL8.1|RL28_NITWN RecName: Full=50S ribosomal protein L28
gi|74419474|gb|ABA03673.1| LSU ribosomal protein L28P [Nitrobacter winogradskyi Nb-255]
Length = 97
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
G++VS KT+R + PN+ S + +R +V+THALR +D GG D +LLK
Sbjct: 15 GHKVSH-SNIKTKRRFLPNLVNVTFVSETLSSSVRFRVSTHALRSVDHRGGFDAFLLK 71
>gi|255263970|ref|ZP_05343312.1| 50S ribosomal protein L28 [Thalassiobium sp. R2A62]
gi|255106305|gb|EET48979.1| 50S ribosomal protein L28 [Thalassiobium sp. R2A62]
Length = 93
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS N+TRR + PN+Q+ L S + R + +++ ALR +D
Sbjct: 2 SRRCELTGKGPMTGNNVSH-AKNRTRRRFLPNLQDVTLASETLGRSFKFRISNAALRTVD 60
Query: 104 KAGGIDEYLLKT 115
GG+D + K+
Sbjct: 61 HRGGLDGFFAKS 72
>gi|347822213|ref|ZP_08875647.1| 50S ribosomal protein L28 [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 77
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKTRR + PN+Q +R + +R IR++V++ ALR IDK GID
Sbjct: 9 GKKPMVGNNVSH-ANNKTRRRFLPNLQYRRFWVESENRWIRLRVSSAALRLIDK-NGIDS 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|209883222|ref|YP_002287079.1| 50S ribosomal protein L28 [Oligotropha carboxidovorans OM5]
gi|337739681|ref|YP_004631409.1| 50S ribosomal protein L28 [Oligotropha carboxidovorans OM5]
gi|386028699|ref|YP_005949474.1| 50S ribosomal protein L28 [Oligotropha carboxidovorans OM4]
gi|226732842|sp|B6J9Z3.1|RL28_OLICO RecName: Full=50S ribosomal protein L28
gi|209871418|gb|ACI91214.1| 50S ribosomal protein L28 [Oligotropha carboxidovorans OM5]
gi|336093767|gb|AEI01593.1| 50S ribosomal protein L28 [Oligotropha carboxidovorans OM4]
gi|336097345|gb|AEI05168.1| 50S ribosomal protein L28 [Oligotropha carboxidovorans OM5]
Length = 97
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K Q G++VS K++R + PN+ L S + + +R++V+T+AL+ +D
Sbjct: 2 SRRCELTAKGPQVGHKVSHSNI-KSKRRFLPNLCNVTLMSETLGQSVRLRVSTNALKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +LLK
Sbjct: 61 HNGGLDAFLLK 71
>gi|389871870|ref|YP_006379289.1| 50S ribosomal protein L28 [Advenella kashmirensis WT001]
gi|388537119|gb|AFK62307.1| 50S ribosomal protein L28 [Advenella kashmirensis WT001]
Length = 78
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK GN VS NKT+R + PN+Q +R + +R +R++V+T+ALR ID
Sbjct: 2 AKVCQVTGKRPMSGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSTNALRTID 60
Query: 104 KAGGIDEYL 112
K GID L
Sbjct: 61 KK-GIDVIL 68
>gi|124809906|ref|XP_001348713.1| mitochondrial ribosomal protein L28 precursor, putative [Plasmodium
falciparum 3D7]
gi|23497612|gb|AAN37152.1| mitochondrial ribosomal protein L28 precursor, putative [Plasmodium
falciparum 3D7]
Length = 281
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHI-RVKVTT 96
R+ ++ GL+ + + +VS KTR KPNV +K + S ++ I V++TT
Sbjct: 39 RVPSAASQTGLYHDEDYNYYTKVSY-SLKKTRIKLKPNVFKKHIVSNELNTIIPNVRLTT 97
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
AL +D AGG D Y+L+TP ++ + +G
Sbjct: 98 SALHAMDDAGGFDNYILRTPPEELRSNLG 126
>gi|121608722|ref|YP_996529.1| 50S ribosomal protein L28 [Verminephrobacter eiseniae EF01-2]
gi|166228170|sp|A1WIQ4.1|RL28_VEREI RecName: Full=50S ribosomal protein L28
gi|121553362|gb|ABM57511.1| LSU ribosomal protein L28P [Verminephrobacter eiseniae EF01-2]
Length = 77
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKTRR + PN+Q +R + +R +R++V++ ALR IDK GID
Sbjct: 9 GKKPMVGNNVSH-ANNKTRRRFLPNLQYRRFWVETENRWVRLRVSSAALRLIDK-NGIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|221638418|ref|YP_002524680.1| 50S ribosomal protein L28 [Rhodobacter sphaeroides KD131]
gi|332557448|ref|ZP_08411770.1| 50S ribosomal protein L28 [Rhodobacter sphaeroides WS8N]
gi|429209863|ref|ZP_19201084.1| LSU ribosomal protein L28p [Rhodobacter sp. AKP1]
gi|221159199|gb|ACM00179.1| 50S ribosomal protein L28 [Rhodobacter sphaeroides KD131]
gi|332275160|gb|EGJ20475.1| 50S ribosomal protein L28 [Rhodobacter sphaeroides WS8N]
gi|428187156|gb|EKX55747.1| LSU ribosomal protein L28p [Rhodobacter sp. AKP1]
Length = 84
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
GN VS NK+RR + PN+ + L S ++ + +++++ ALR +D GG+D +L K
Sbjct: 3 GNTVSH-ANNKSRRRFLPNLNDVTLISDVLGQSFKLRISAAALRTVDHRGGLDAFLAK 59
>gi|91206094|ref|YP_538449.1| 50S ribosomal protein L28 [Rickettsia bellii RML369-C]
gi|157826473|ref|YP_001495537.1| 50S ribosomal protein L28 [Rickettsia bellii OSU 85-389]
gi|122425214|sp|Q1RH04.1|RL28_RICBR RecName: Full=50S ribosomal protein L28
gi|166226612|sp|A8GUK4.1|RL28_RICB8 RecName: Full=50S ribosomal protein L28
gi|91069638|gb|ABE05360.1| 50S ribosomal protein L28 [Rickettsia bellii RML369-C]
gi|157801777|gb|ABV78500.1| 50S ribosomal protein L28 [Rickettsia bellii OSU 85-389]
Length = 97
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G + +GN VS KTRR ++PN++ + S I R+ V+ + ++KAGG
Sbjct: 7 LTGVGVLYGNNVSHSQ-RKTRRRFEPNLRSVKFISDITTAEYRLSVSARCISSVEKAGGF 65
Query: 109 DEYLLKTPYHKMDT 122
D Y+LK + T
Sbjct: 66 DAYMLKANNDALST 79
>gi|126733276|ref|ZP_01749023.1| ribosomal protein L28 [Roseobacter sp. CCS2]
gi|126716142|gb|EBA13006.1| ribosomal protein L28 [Roseobacter sp. CCS2]
Length = 82
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
GN VS N+TRR + PN+Q+ L S + R + K++ ALR +D GG+D ++ K
Sbjct: 3 GNNVSH-AKNRTRRRFLPNLQDVTLQSDTLGRSFKFKISNAALRTVDHRGGLDAFMAK 59
>gi|110678983|ref|YP_681990.1| 50S ribosomal protein L28 [Roseobacter denitrificans OCh 114]
gi|109455099|gb|ABG31304.1| ribosomal protein L28 [Roseobacter denitrificans OCh 114]
Length = 120
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKTRR + PN+ + L S + R + +++ ALR +D GG+
Sbjct: 28 LTGKGPMTGNNVSH-ANNKTRRRFLPNLNDVTLQSEALGRGFKFRISAAALRTVDHRGGL 86
Query: 109 DEYLLK 114
D+++ K
Sbjct: 87 DKFMAK 92
>gi|373450003|ref|ZP_09542086.1| 50S ribosomal protein L28 [Wolbachia pipientis wAlbB]
gi|371932791|emb|CCE77073.1| 50S ribosomal protein L28 [Wolbachia pipientis wAlbB]
Length = 104
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 55 QFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
FGN+VS KT+R + N+ + L S I+D+ ++ T LR ID G +D +LL
Sbjct: 13 SFGNKVSH-SNRKTKRTFLLNLHKVTLTSNILDKKFSFRIATRTLRTIDYKGDLDAFLLN 71
Query: 115 TPYHKMDTE 123
T K+ E
Sbjct: 72 TKTIKLSKE 80
>gi|403373873|gb|EJY86864.1| hypothetical protein OXYTRI_08745 [Oxytricha trifallax]
Length = 400
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 42 NRAKRGLFAGKHIQFGNRVSEDGGNK-TRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALR 100
+R RGLF K G + K + + KPNV+ K L S+I+ + +++++ A +
Sbjct: 24 SRHHRGLFHRK--THGKKYQRCFSMKQSIKTQKPNVKGKTLQSHILGQSFKLELSMKARK 81
Query: 101 CIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
CI KAG +D+YLL T +D++ G+ + I++
Sbjct: 82 CIMKAGSLDKYLLNTSPADIDSKFGIMLRDYIKQ 115
>gi|170741827|ref|YP_001770482.1| 50S ribosomal protein L28 [Methylobacterium sp. 4-46]
gi|226732838|sp|B0UCJ9.1|RL28_METS4 RecName: Full=50S ribosomal protein L28
gi|168196101|gb|ACA18048.1| ribosomal protein L28 [Methylobacterium sp. 4-46]
Length = 96
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + G+ VS KT+R + PN+ L S + R +R++++ +ALR ++
Sbjct: 2 SRRCELTGKAVLTGHLVSHSN-RKTKRRFLPNLCNVTLLSDTLGRSVRLRISANALRSVE 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
GG+D +L+K + L K +IEK
Sbjct: 61 HRGGLDAFLVKAGEQDLSQNARL-LKREIEK 90
>gi|114769311|ref|ZP_01446937.1| ribosomal protein L28 [Rhodobacterales bacterium HTCC2255]
gi|114550228|gb|EAU53109.1| ribosomal protein L28 [Rhodobacterales bacterium HTCC2255]
Length = 96
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK GN VS N+TRR + PN+ + L S ++ + + K++ ALR +D
Sbjct: 2 SRRCELTGKGPMTGNNVSH-AKNRTRRRFLPNLNDVTLASDVLGQAFKFKISAAALRTVD 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
GG+D ++ K ++ +E L K I K
Sbjct: 61 HRGGLDAFMAKAKDAEL-SEKALKVKRDIAK 90
>gi|92116123|ref|YP_575852.1| 50S ribosomal protein L28 [Nitrobacter hamburgensis X14]
gi|122418709|sp|Q1QQV5.1|RL28_NITHX RecName: Full=50S ribosomal protein L28
gi|91799017|gb|ABE61392.1| LSU ribosomal protein L28P [Nitrobacter hamburgensis X14]
Length = 97
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K G++VS KT+R + PN+ S + +R++V+THAL+ +D
Sbjct: 2 SRRCELTAKAPMVGHKVSHSNI-KTKRRFLPNLVNVTFLSEALASPVRLRVSTHALKSVD 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
GG D +LLK ++ + + K +IEK
Sbjct: 61 HRGGFDAFLLKAKNAELSPK-AIEIKRRIEK 90
>gi|398824871|ref|ZP_10583188.1| ribosomal protein L28 [Bradyrhizobium sp. YR681]
gi|398224451|gb|EJN10756.1| ribosomal protein L28 [Bradyrhizobium sp. YR681]
Length = 103
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K G++VS KT+R + PN+ S ++R++R++V+T+A++ +D
Sbjct: 2 SRRCELTAKGPLVGHKVSHSNI-KTKRRFLPNLVNVTFISEALERNVRLRVSTNAVKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +LLK
Sbjct: 61 HNGGLDAFLLK 71
>gi|88608656|ref|YP_506211.1| 50S ribosomal protein L28 [Neorickettsia sennetsu str. Miyayama]
gi|123492103|sp|Q2GE85.1|RL28_NEOSM RecName: Full=50S ribosomal protein L28
gi|88600825|gb|ABD46293.1| ribosomal protein L28 [Neorickettsia sennetsu str. Miyayama]
Length = 102
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G Q GN VS KT++ + PN+Q +FS ++ + R KV+ +R ID GG+
Sbjct: 7 LTGHGWQNGNMVSH-SNRKTKKRFMPNLQRVTVFSDVLKQKFRFKVSAKTIRTIDFKGGL 65
Query: 109 DEYLLKTPYHKMDTEMGLYWKTKIEK 134
D++L T K+ ++ L K +I K
Sbjct: 66 DDFLRNTKNSKL-SKSALVLKKRIMK 90
>gi|303257739|ref|ZP_07343751.1| ribosomal protein L28 [Burkholderiales bacterium 1_1_47]
gi|331000392|ref|ZP_08324070.1| ribosomal protein L28 [Parasutterella excrementihominis YIT 11859]
gi|302859709|gb|EFL82788.1| ribosomal protein L28 [Burkholderiales bacterium 1_1_47]
gi|329571944|gb|EGG53618.1| ribosomal protein L28 [Parasutterella excrementihominis YIT 11859]
Length = 77
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GNRVS NKT+R + PN+Q +R + +R +R++VT ALR IDK G
Sbjct: 9 GKAPMVGNRVSH-ANNKTKRRFMPNLQYRRFWVESENRWVRLRVTNAALRTIDKNG 63
>gi|300024668|ref|YP_003757279.1| 50S ribosomal protein L28 [Hyphomicrobium denitrificans ATCC 51888]
gi|299526489|gb|ADJ24958.1| ribosomal protein L28 [Hyphomicrobium denitrificans ATCC 51888]
Length = 97
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 66 NKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
NKT+R ++PN+ L S + R +R++++ AL+ ++ GG+D +LLK
Sbjct: 23 NKTKRKFRPNLHNVTLLSDALGRKVRLRISARALKSVEHRGGLDAFLLK 71
>gi|405946621|gb|EKC17682.1| 39S ribosomal protein L28, mitochondrial [Crassostrea gigas]
Length = 253
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG---GNKTRRNWKPNVQEKRLFSYIMDRHI 90
VP + A +GL+ G+ G ++ + N+ + WKP + ++ ++S I+D+
Sbjct: 66 VPIPVLYPQDANKGLWGGEGYILGYKMDKSHLRMKNRLPKIWKPFISKRAVYSEILDKWF 125
Query: 91 RVKVTTHALRCIDKAGGIDEYLLKT 115
+ +T L ID+ G D Y+LKT
Sbjct: 126 EIPMTMRVLDLIDECHGFDNYILKT 150
>gi|258543788|ref|ZP_05704022.1| 50S ribosomal protein L28 [Cardiobacterium hominis ATCC 15826]
gi|258520963|gb|EEV89822.1| 50S ribosomal protein L28 [Cardiobacterium hominis ATCC 15826]
Length = 78
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NK +R + PN+QE R + +R +++KV+TH +R IDK GID
Sbjct: 8 TGKKPMVGNTVSH-ANNKNKRRFLPNIQEHRFWVESENRFVKLKVSTHGMRIIDKR-GID 65
Query: 110 EYL 112
L
Sbjct: 66 AVL 68
>gi|297697643|ref|XP_002825958.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like isoform 1
[Pongo abelii]
gi|297697645|ref|XP_002825959.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like isoform 2
[Pongo abelii]
gi|395747229|ref|XP_003778574.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Pongo
abelii]
gi|395747231|ref|XP_003778575.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Pongo
abelii]
gi|395747233|ref|XP_003778576.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Pongo
abelii]
Length = 148
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G + + + ++ WKP + E+ L+S I+D+
Sbjct: 65 VPIPIYFPPESQRGLWGGEGWIRGQIYANNDKLSKRLKKVWKPQLFERELYSEILDKKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLK 114
V VT L ID+A G+D Y+LK
Sbjct: 125 VTVTMRTLDLIDEAYGLDFYILK 147
>gi|27375273|ref|NP_766802.1| 50S ribosomal protein L28 [Bradyrhizobium japonicum USDA 110]
gi|67461519|sp|Q89XZ3.1|RL28_BRAJA RecName: Full=50S ribosomal protein L28
gi|27348409|dbj|BAC45427.1| 50S ribosomal protein L28 [Bradyrhizobium japonicum USDA 110]
Length = 102
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 56 FGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
G++VS KT+R + PN+ S ++R++R++V+T+A++ +D GG+D +LLK
Sbjct: 14 VGHKVSHSNI-KTKRRFLPNLVNVTFISEALERNVRLRVSTNAVKSVDHNGGLDAFLLK 71
>gi|119897427|ref|YP_932640.1| 50S ribosomal protein L28 [Azoarcus sp. BH72]
gi|166226540|sp|A1K4J8.1|RL28_AZOSB RecName: Full=50S ribosomal protein L28
gi|119669840|emb|CAL93753.1| 50S ribosomal protein L28 [Azoarcus sp. BH72]
Length = 78
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + PN+Q +R +S +R IR++V+ ALR IDK G
Sbjct: 9 GKAPMVGNHVSH-ANNKTKRRFLPNLQNRRFWSEAENRWIRLRVSNAALRTIDKKG 63
>gi|56477979|ref|YP_159568.1| 50S ribosomal protein L28 [Aromatoleum aromaticum EbN1]
gi|67461304|sp|Q5P1Z7.1|RL28_AZOSE RecName: Full=50S ribosomal protein L28
gi|56314022|emb|CAI08667.1| 50S ribosomal protein L28 [Aromatoleum aromaticum EbN1]
Length = 78
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + PN+Q +R +S +R IR++V+ ALR IDK G
Sbjct: 7 VTGKAPMVGNNVSH-ANNKTKRRFLPNLQNRRFWSESENRWIRLRVSNAALRTIDKKG 63
>gi|402496849|ref|YP_006556109.1| 50S ribosomal protein L28 [Wolbachia endosymbiont of Onchocerca
ochengi]
gi|398650122|emb|CCF78292.1| 50S ribosomal protein L28 [Wolbachia endosymbiont of Onchocerca
ochengi]
Length = 124
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 55 QFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
FGN+VS KT+R + N+ L S I+++ + +V LR ID GG+D +LL
Sbjct: 33 SFGNKVSH-SNRKTKRTFLLNLHSVTLMSNILNKKFKFRVAARTLRTIDYKGGLDAFLLN 91
Query: 115 TPYHKMD 121
T K+
Sbjct: 92 TKTIKLS 98
>gi|358636252|dbj|BAL23549.1| 50S ribosomal protein L28 [Azoarcus sp. KH32C]
Length = 78
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + PN+Q +R +S +R IR++V+ ALR IDK G
Sbjct: 7 VTGKAPMVGNNVSH-ANNKTKRRFLPNLQNRRFWSESENRWIRLRVSNAALRTIDKKG 63
>gi|333376244|ref|ZP_08468032.1| 50S ribosomal protein L28 [Kingella kingae ATCC 23330]
gi|381402049|ref|ZP_09926934.1| 50S ribosomal protein L28 [Kingella kingae PYKK081]
gi|332968532|gb|EGK07593.1| 50S ribosomal protein L28 [Kingella kingae ATCC 23330]
gi|380832962|gb|EIC12845.1| 50S ribosomal protein L28 [Kingella kingae PYKK081]
Length = 78
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK GN VS NKT+R + PN+Q +R + +R +R++V+ ALR ID
Sbjct: 2 AKVCKITGKRPMSGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRIRVSNAALRTID 60
Query: 104 KAGGIDEYL 112
K GID L
Sbjct: 61 K-NGIDAVL 68
>gi|349805959|gb|AEQ18452.1| putative mitochondrial ribosomal protein l28 [Hymenochirus
curtipes]
Length = 133
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 73 KPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
KP + ++L+S I+D+ + VT L ID A G D Y+LKTP ++++ G+
Sbjct: 1 KPQLFSRKLYSEILDKTFSITVTMRTLDLIDAAYGFDFYILKTPKEDLNSKFGM 54
>gi|374287800|ref|YP_005034885.1| 50S ribosomal protein L28 [Bacteriovorax marinus SJ]
gi|301166341|emb|CBW25917.1| 50S ribosomal protein L28 [Bacteriovorax marinus SJ]
Length = 76
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN+VS N+T+ KPN+Q KR+F + I+++++T A+R +DK G +
Sbjct: 7 LTGKRRLVGNKVSH-AKNRTKMTQKPNLQTKRVFDPESGQTIKLRLSTSAIRTLDKVGSL 65
Query: 109 DEYLLK 114
++L K
Sbjct: 66 SKFLKK 71
>gi|365092239|ref|ZP_09329387.1| 50S ribosomal protein L28 [Acidovorax sp. NO-1]
gi|395009669|ref|ZP_10393167.1| ribosomal protein L28 [Acidovorax sp. CF316]
gi|363415363|gb|EHL22490.1| 50S ribosomal protein L28 [Acidovorax sp. NO-1]
gi|394312267|gb|EJE49452.1| ribosomal protein L28 [Acidovorax sp. CF316]
Length = 77
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V++ ALR IDK GID
Sbjct: 9 GKKPMVGNNVSH-ANNKTKRRFLPNLQYRRFWVETENRWVRLRVSSAALRLIDK-NGIDS 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|332027514|gb|EGI67591.1| 39S ribosomal protein L28, mitochondrial [Acromyrmex echinatior]
Length = 384
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
+P I G++ G+ + G + + W P++ + ++S ++D ++R+
Sbjct: 70 IPIPVIYPKEMNDGIWGGEAMIKGFKKKGIFKRRVPHFWLPSLFKSVIYSEVLDTYMRIV 129
Query: 94 VTTHALRCIDKAGGIDEYLLKTP 116
+T ALR I + G D YLLKTP
Sbjct: 130 ITQRALRLIHENYGFDHYLLKTP 152
>gi|114799496|ref|YP_762169.1| 50S ribosomal protein [Hyphomonas neptunium ATCC 15444]
gi|122941994|sp|Q0BWH4.1|RL28_HYPNA RecName: Full=50S ribosomal protein L28
gi|114739670|gb|ABI77795.1| 50S ribosomal protein [Hyphomonas neptunium ATCC 15444]
Length = 94
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G GN VS KT+R + PN+ + L S +D++ R+++ ALR +DK GG+
Sbjct: 7 LTGTKPMVGNIVSH-SQIKTKRRYLPNLVQVTLRSEALDQNFRMRIAAKALRTVDKLGGL 65
Query: 109 DEYLLKTPYHKMDTE 123
D +L K + T+
Sbjct: 66 DAFLAKAKEEGLSTK 80
>gi|339504531|ref|YP_004691951.1| 50S ribosomal protein L28 [Roseobacter litoralis Och 149]
gi|338758524|gb|AEI94988.1| 50S ribosomal protein L28 [Roseobacter litoralis Och 149]
Length = 99
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKTRR + PN+ + L S + R + +++ ALR +D GG+
Sbjct: 7 LTGKGPMTGNNVSH-ANNKTRRRFLPNLNDVTLQSETLGRAFKFRISAAALRTVDHRGGL 65
Query: 109 DEYL 112
D+++
Sbjct: 66 DKFM 69
>gi|149928584|ref|ZP_01916804.1| ribosomal protein L28 [Limnobacter sp. MED105]
gi|149822696|gb|EDM81963.1| ribosomal protein L28 [Limnobacter sp. MED105]
Length = 77
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN+VS NKT+R + PN+Q ++ + +R +R+++T +ALR IDK GID
Sbjct: 8 TGKRPMVGNKVSH-ANNKTKRRFLPNLQSRKFWVESENRWVRLRLTNNALRTIDK-NGID 65
Query: 110 EYL 112
L
Sbjct: 66 AVL 68
>gi|254523115|ref|ZP_05135170.1| ribosomal protein L28 [Stenotrophomonas sp. SKA14]
gi|386720472|ref|YP_006186798.1| 50S ribosomal protein L28 [Stenotrophomonas maltophilia D457]
gi|219720706|gb|EED39231.1| ribosomal protein L28 [Stenotrophomonas sp. SKA14]
gi|384080034|emb|CCH14637.1| LSU ribosomal protein L28p [Stenotrophomonas maltophilia D457]
gi|456735312|gb|EMF60073.1| LSU ribosomal protein L28p [Stenotrophomonas maltophilia EPM1]
Length = 67
Score = 47.0 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 54 IQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYL 112
+Q GN VS NKTRR + PN+ E+R + +R ++++V+ HALR IDK GID L
Sbjct: 1 MQTGNNVSH-ANNKTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTIDK-NGIDSVL 57
>gi|119606237|gb|EAW85831.1| mitochondrial ribosomal protein L28, isoform CRA_d [Homo sapiens]
Length = 178
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDG--GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
VP ++RGL+ G+ G + + + ++ WKP + E+ +S I+D+
Sbjct: 65 VPIPIYFPPESQRGLWGGEGWILGQIYANNDKLSKRLKKVWKPQLFEREFYSEILDKKFT 124
Query: 92 VKVTTHALRCIDKAGGIDEYLLK 114
V VT L ID+A G+D Y+LK
Sbjct: 125 VTVTMRTLDLIDEAYGLDFYILK 147
>gi|83943974|ref|ZP_00956431.1| ribosomal protein L28 [Sulfitobacter sp. EE-36]
gi|83954547|ref|ZP_00963258.1| ribosomal protein L28 [Sulfitobacter sp. NAS-14.1]
gi|83840831|gb|EAP80002.1| ribosomal protein L28 [Sulfitobacter sp. NAS-14.1]
gi|83845221|gb|EAP83101.1| ribosomal protein L28 [Sulfitobacter sp. EE-36]
Length = 99
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS N+TRR + PN+ + L S + R + +++ ALR +D GG+
Sbjct: 7 LTGKGPMTGNNVSH-AKNRTRRRFLPNLNDVTLQSEALGRGFKFRISAAALRTVDHRGGL 65
Query: 109 DEYLLKTPYHKMDTEMGL 126
D+++ K DTE+ +
Sbjct: 66 DKFMAKAK----DTELSV 79
>gi|121595684|ref|YP_987580.1| 50S ribosomal protein L28 [Acidovorax sp. JS42]
gi|221068788|ref|ZP_03544893.1| ribosomal protein L28 [Comamonas testosteroni KF-1]
gi|222111892|ref|YP_002554156.1| 50S ribosomal protein l28 [Acidovorax ebreus TPSY]
gi|264677019|ref|YP_003276925.1| 50S ribosomal protein L28 [Comamonas testosteroni CNB-2]
gi|299532561|ref|ZP_07045951.1| 50S ribosomal protein L28 [Comamonas testosteroni S44]
gi|319761898|ref|YP_004125835.1| 50S ribosomal protein L28 [Alicycliphilus denitrificans BC]
gi|330826250|ref|YP_004389553.1| 50S ribosomal protein L28 [Alicycliphilus denitrificans K601]
gi|418530734|ref|ZP_13096657.1| 50S ribosomal protein L28 [Comamonas testosteroni ATCC 11996]
gi|166226533|sp|A1WB79.1|RL28_ACISJ RecName: Full=50S ribosomal protein L28
gi|254801357|sp|B9MEB7.1|RL28_DIAST RecName: Full=50S ribosomal protein L28
gi|120607764|gb|ABM43504.1| LSU ribosomal protein L28P [Acidovorax sp. JS42]
gi|220713811|gb|EED69179.1| ribosomal protein L28 [Comamonas testosteroni KF-1]
gi|221731336|gb|ACM34156.1| ribosomal protein L28 [Acidovorax ebreus TPSY]
gi|262207531|gb|ACY31629.1| ribosomal protein L28 [Comamonas testosteroni CNB-2]
gi|298719508|gb|EFI60475.1| 50S ribosomal protein L28 [Comamonas testosteroni S44]
gi|317116459|gb|ADU98947.1| ribosomal protein L28 [Alicycliphilus denitrificans BC]
gi|329311622|gb|AEB86037.1| 50S ribosomal protein L28 [Alicycliphilus denitrificans K601]
gi|371452453|gb|EHN65482.1| 50S ribosomal protein L28 [Comamonas testosteroni ATCC 11996]
Length = 77
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V++ ALR IDK GID
Sbjct: 9 GKKPMVGNNVSH-ANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLIDK-NGIDS 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|160900797|ref|YP_001566379.1| 50S ribosomal protein L28 [Delftia acidovorans SPH-1]
gi|333912901|ref|YP_004486633.1| 50S ribosomal protein L28 [Delftia sp. Cs1-4]
gi|226738065|sp|A9BNU9.1|RL28_DELAS RecName: Full=50S ribosomal protein L28
gi|160366381|gb|ABX37994.1| ribosomal protein L28 [Delftia acidovorans SPH-1]
gi|333743101|gb|AEF88278.1| ribosomal protein L28 [Delftia sp. Cs1-4]
Length = 77
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V++ ALR IDK GID
Sbjct: 9 GKKPMVGNNVSH-ANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLIDK-NGIDS 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|319943235|ref|ZP_08017518.1| 50S ribosomal protein L28 [Lautropia mirabilis ATCC 51599]
gi|319743777|gb|EFV96181.1| 50S ribosomal protein L28 [Lautropia mirabilis ATCC 51599]
Length = 76
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK GN VS NKT+R + PN+Q++RL+ R++R++VT LR ID
Sbjct: 2 AKVCQVTGKGPMVGNNVSH-ANNKTKRRFLPNLQQRRLWVESEQRYVRLRVTAAGLRKID 60
Query: 104 KAG 106
K G
Sbjct: 61 KLG 63
>gi|290462043|gb|ADD24069.1| 39S ribosomal protein L28, mitochondrial [Lepeophtheirus salmonis]
Length = 295
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 72 WKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
W P + ++S ++D++I + VT L+ +DKA G D YLL+TP +++
Sbjct: 124 WWPKLHLAVVYSRVLDKYIEMPVTRRGLKLVDKAHGFDNYLLRTPVNEI 172
>gi|114764005|ref|ZP_01443246.1| ribosomal protein L28 [Pelagibaca bermudensis HTCC2601]
gi|114543597|gb|EAU46611.1| ribosomal protein L28 [Roseovarius sp. HTCC2601]
Length = 96
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK G+ VS NKT+R + PN+ + L S + R ++++++ ALR +D GG+
Sbjct: 7 LTGKGPMTGHNVSH-ANNKTKRRFLPNLNDVTLQSETLGRGVKLRISASALRSVDHRGGL 65
Query: 109 DEYL 112
D++L
Sbjct: 66 DKFL 69
>gi|372488200|ref|YP_005027765.1| 50S ribosomal protein L28 [Dechlorosoma suillum PS]
gi|359354753|gb|AEV25924.1| ribosomal protein L28 [Dechlorosoma suillum PS]
Length = 77
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKT+R + PN+Q +R + +R IR++V+ LR IDK GID
Sbjct: 8 TGKAPMVGNNVSH-ANNKTKRRFLPNLQYRRFWVESENRFIRLRVSNAGLRLIDKK-GID 65
Query: 110 EYLL 113
E L+
Sbjct: 66 EVLV 69
>gi|452126220|ref|ZP_21938803.1| 50S ribosomal protein L28 [Bordetella holmesii F627]
gi|452129588|ref|ZP_21942163.1| 50S ribosomal protein L28 [Bordetella holmesii H558]
gi|451921315|gb|EMD71460.1| 50S ribosomal protein L28 [Bordetella holmesii F627]
gi|451923223|gb|EMD73365.1| 50S ribosomal protein L28 [Bordetella holmesii H558]
Length = 78
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++VT A+R IDK GID
Sbjct: 9 GKGPMVGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVTAKAIRTIDK-NGIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|33593074|ref|NP_880718.1| 50S ribosomal protein L28 [Bordetella pertussis Tohama I]
gi|33596368|ref|NP_884011.1| 50S ribosomal protein L28 [Bordetella parapertussis 12822]
gi|33602345|ref|NP_889905.1| 50S ribosomal protein L28 [Bordetella bronchiseptica RB50]
gi|187478973|ref|YP_786997.1| 50S ribosomal protein L28 [Bordetella avium 197N]
gi|384204372|ref|YP_005590111.1| 50S ribosomal protein L28 [Bordetella pertussis CS]
gi|408416066|ref|YP_006626773.1| 50S ribosomal protein L28 [Bordetella pertussis 18323]
gi|410419570|ref|YP_006900019.1| 50S ribosomal protein L28 [Bordetella bronchiseptica MO149]
gi|410472262|ref|YP_006895543.1| 50S ribosomal protein L28 [Bordetella parapertussis Bpp5]
gi|412338496|ref|YP_006967251.1| 50S ribosomal protein L28 [Bordetella bronchiseptica 253]
gi|427814034|ref|ZP_18981098.1| 50S ribosomal protein L28 [Bordetella bronchiseptica 1289]
gi|427821492|ref|ZP_18988555.1| 50S ribosomal protein L28 [Bordetella bronchiseptica D445]
gi|427823313|ref|ZP_18990375.1| 50S ribosomal protein L28 [Bordetella bronchiseptica Bbr77]
gi|67461507|sp|Q7VWY1.1|RL28_BORPE RecName: Full=50S ribosomal protein L28
gi|67461508|sp|Q7W9L9.1|RL28_BORPA RecName: Full=50S ribosomal protein L28
gi|67461509|sp|Q7WH39.1|RL28_BORBR RecName: Full=50S ribosomal protein L28
gi|123514301|sp|Q2KXH8.1|RL28_BORA1 RecName: Full=50S ribosomal protein L28
gi|33563449|emb|CAE42330.1| 50S ribosomal protein L28 [Bordetella pertussis Tohama I]
gi|33566137|emb|CAE37038.1| 50S ribosomal protein L28 [Bordetella parapertussis]
gi|33576784|emb|CAE33863.1| 50S ribosomal protein L28 [Bordetella bronchiseptica RB50]
gi|115423559|emb|CAJ50095.1| 50S ribosomal protein L28 [Bordetella avium 197N]
gi|332382486|gb|AEE67333.1| 50S ribosomal protein L28 [Bordetella pertussis CS]
gi|401778236|emb|CCJ63635.1| 50S ribosomal protein L28 [Bordetella pertussis 18323]
gi|408442372|emb|CCJ48912.1| 50S ribosomal protein L28 [Bordetella parapertussis Bpp5]
gi|408446865|emb|CCJ58536.1| 50S ribosomal protein L28 [Bordetella bronchiseptica MO149]
gi|408768330|emb|CCJ53092.1| 50S ribosomal protein L28 [Bordetella bronchiseptica 253]
gi|410565034|emb|CCN22582.1| 50S ribosomal protein L28 [Bordetella bronchiseptica 1289]
gi|410572492|emb|CCN20772.1| 50S ribosomal protein L28 [Bordetella bronchiseptica D445]
gi|410588578|emb|CCN03637.1| 50S ribosomal protein L28 [Bordetella bronchiseptica Bbr77]
Length = 78
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++VT A+R IDK GID
Sbjct: 9 GKGPMVGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVTAKAIRTIDK-NGIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|254486876|ref|ZP_05100081.1| ribosomal protein L28 [Roseobacter sp. GAI101]
gi|214043745|gb|EEB84383.1| ribosomal protein L28 [Roseobacter sp. GAI101]
Length = 100
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS N+TRR + PN+ + L S + R + +++ ALR +D GG+
Sbjct: 7 LTGKGPMTGNNVSH-AKNRTRRRFLPNLNDVTLQSESLGRSFKFRISAAALRTVDHRGGL 65
Query: 109 DEYLLKTPYHKMDTEM 124
D+++ K DTE+
Sbjct: 66 DKFMAKAK----DTEL 77
>gi|194856401|ref|XP_001968743.1| GG25036 [Drosophila erecta]
gi|190660610|gb|EDV57802.1| GG25036 [Drosophila erecta]
Length = 301
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
+P I + RG++ G+ + G + + + W PN++ + SY++D ++ V
Sbjct: 72 IPLPLIDTPESHRGIWGGEAVIKGFQKRQQTKRRVPHFWVPNLRRSVVHSYVLDSYMSVV 131
Query: 94 VTTHALRCIDKAGGIDEYLLKT 115
VT L I + G D YLLK
Sbjct: 132 VTERTLEQIHECHGFDHYLLKN 153
>gi|351731039|ref|ZP_08948730.1| 50S ribosomal protein L28 [Acidovorax radicis N35]
Length = 77
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V++ ALR IDK GID
Sbjct: 9 GKKPMTGNNVSH-ANNKTKRRFLPNLQYRRFWVETENRWVRLRVSSAALRLIDK-NGIDS 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|225712272|gb|ACO11982.1| 39S ribosomal protein L28, mitochondrial precursor [Lepeophtheirus
salmonis]
Length = 295
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 72 WKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
W P + ++S ++D++I + VT L+ +DKA G D YLL+TP +++
Sbjct: 124 WWPKLHLAVVYSRVLDKYIEMPVTRRGLKLVDKAHGFDNYLLRTPVNEI 172
>gi|120612081|ref|YP_971759.1| 50S ribosomal protein L28 [Acidovorax citrulli AAC00-1]
gi|241765340|ref|ZP_04763316.1| ribosomal protein L28 [Acidovorax delafieldii 2AN]
gi|326318090|ref|YP_004235762.1| 50S ribosomal protein L28 [Acidovorax avenae subsp. avenae ATCC
19860]
gi|166226528|sp|A1TSP7.1|RL28_ACIAC RecName: Full=50S ribosomal protein L28
gi|120590545|gb|ABM33985.1| LSU ribosomal protein L28P [Acidovorax citrulli AAC00-1]
gi|241364939|gb|EER59877.1| ribosomal protein L28 [Acidovorax delafieldii 2AN]
gi|323374926|gb|ADX47195.1| 50S ribosomal protein L28 [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 77
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V++ ALR IDK GID
Sbjct: 9 GKKPMVGNNVSH-ANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLIDK-NGIDS 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|313676115|ref|YP_004054111.1| 50S ribosomal protein L28p [Marivirga tractuosa DSM 4126]
gi|312942813|gb|ADR22003.1| LSU ribosomal protein L28P [Marivirga tractuosa DSM 4126]
Length = 79
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK Q GN VS NKTRR + PN+Q+KR + D+ I +KV+ A+R I+K G
Sbjct: 7 ITGKRPQVGNNVSHSN-NKTRRRFLPNLQKKRFYLPEEDKWITLKVSASAIRTINKNG 63
>gi|254258430|ref|ZP_04949484.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1710a]
gi|254217119|gb|EET06503.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1710a]
Length = 454
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 31 KKCVPDSRIVMNRAKRGLFA------GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSY 84
K+ V R + R + L A GK GN VS NKT+R + PN+Q +R +
Sbjct: 360 KRTVTGDRTRIQRIRSALMARVCQVTGKAPMSGNNVSH-ANNKTKRRFLPNLQNRRFWVE 418
Query: 85 IMDRHIRVKVTTHALRCIDKAGGIDEYL 112
+R +R++V+ LR IDK GID L
Sbjct: 419 SENRWVRLRVSNAGLRLIDK-NGIDSVL 445
>gi|239814289|ref|YP_002943199.1| 50S ribosomal protein L28 [Variovorax paradoxus S110]
gi|319792070|ref|YP_004153710.1| 50S ribosomal protein L28 [Variovorax paradoxus EPS]
gi|398808426|ref|ZP_10567289.1| ribosomal protein L28 [Variovorax sp. CF313]
gi|259646753|sp|C5CRK1.1|RL28_VARPS RecName: Full=50S ribosomal protein L28
gi|239800866|gb|ACS17933.1| ribosomal protein L28 [Variovorax paradoxus S110]
gi|315594533|gb|ADU35599.1| ribosomal protein L28 [Variovorax paradoxus EPS]
gi|398087458|gb|EJL78044.1| ribosomal protein L28 [Variovorax sp. CF313]
Length = 77
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V++ ALR IDK GID
Sbjct: 9 GKGPMVGNNVSH-ANNKTKRRFLPNLQYRRFWVETENRWVRLRVSSAALRLIDK-NGIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|254456316|ref|ZP_05069745.1| 50S ribosomal protein L28 [Candidatus Pelagibacter sp. HTCC7211]
gi|207083318|gb|EDZ60744.1| 50S ribosomal protein L28 [Candidatus Pelagibacter sp. HTCC7211]
Length = 91
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYL 112
G+ VS NKT+R + PN+++ + S +M R +++ V+ +R +DK G DEYL
Sbjct: 3 GHNVSH-ANNKTKRRFLPNLKKVKFTSELMKRSLKLTVSNAGVRSVDKKGSFDEYL 57
>gi|433629198|ref|YP_007262826.1| 50S ribosomal protein L28-1 [Mycobacterium canettii CIPT 140070010]
gi|432160791|emb|CCK58121.1| 50S ribosomal protein L28-1 [Mycobacterium canettii CIPT 140070010]
Length = 97
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
+ R G+ + FGN VS +TRR W PN+Q K + DR IRV+V+ ++ ID
Sbjct: 2 SARCQITGRTVGFGNAVSHSH-LRTRRRWPPNIQVKAYYLPSEDRRIRVRVSVQGIKVID 60
Query: 104 KAG 106
+ G
Sbjct: 61 RDG 63
>gi|237811180|ref|YP_002895631.1| ribosomal protein L28 [Burkholderia pseudomallei MSHR346]
gi|237503801|gb|ACQ96119.1| ribosomal protein L28 [Burkholderia pseudomallei MSHR346]
Length = 163
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 31 KKCVPDSRIVMNRAKRGLFA------GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSY 84
K+ V R + R + L A GK GN VS NKT+R + PN+Q +R +
Sbjct: 69 KRTVTGDRTRIQRIRSALMARVCQVTGKAPMSGNNVSH-ANNKTKRRFLPNLQNRRFWVE 127
Query: 85 IMDRHIRVKVTTHALRCIDKAGGIDEYL 112
+R +R++V+ LR IDK GID L
Sbjct: 128 SENRWVRLRVSNAGLRLIDK-NGIDSVL 154
>gi|399023291|ref|ZP_10725354.1| ribosomal protein L28 [Chryseobacterium sp. CF314]
gi|398083141|gb|EJL73864.1| ribosomal protein L28 [Chryseobacterium sp. CF314]
Length = 79
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R ++ N+ EK+ + D+H+ +KV+ H LR I+K GI
Sbjct: 7 ITGKRAMVGNNVSH-ANNKTKRRFEINLLEKKFYLPEQDKHVTLKVSAHGLRVINKI-GI 64
Query: 109 DEYL 112
+E L
Sbjct: 65 EEAL 68
>gi|418053802|ref|ZP_12691858.1| 50S ribosomal protein L28 [Hyphomicrobium denitrificans 1NES1]
gi|353211427|gb|EHB76827.1| 50S ribosomal protein L28 [Hyphomicrobium denitrificans 1NES1]
Length = 97
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 66 NKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLK 114
NK++R ++PN+ L S + R +R++++ AL+ ++ GG+D +LLK
Sbjct: 23 NKSKRKFRPNLHNVTLMSDTLGRKVRLRISARALKSVEHRGGLDAFLLK 71
>gi|337280826|ref|YP_004620298.1| 50S ribosomal protein L28 [Ramlibacter tataouinensis TTB310]
gi|334731903|gb|AEG94279.1| candidate 50S ribosomal protein L28 [Ramlibacter tataouinensis
TTB310]
Length = 77
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V++ ALR IDK GID
Sbjct: 9 GKGPMVGNNVSH-ANNKTKRRFMPNLQYRRFWVESENRWVRLRVSSAALRLIDK-NGIDS 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|418541741|ref|ZP_13107209.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1258a]
gi|418548068|ref|ZP_13113194.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1258b]
gi|385357173|gb|EIF63244.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1258a]
gi|385358732|gb|EIF64716.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1258b]
Length = 163
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 31 KKCVPDSRIVMNRAKRGLFA------GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSY 84
K+ V R + R + L A GK GN VS NKT+R + PN+Q +R +
Sbjct: 69 KRTVTGDRTRIQRIRSALMARVCQVTGKAPMSGNNVSH-ANNKTKRRFLPNLQNRRFWVE 127
Query: 85 IMDRHIRVKVTTHALRCIDKAGGIDEYL 112
+R +R++V+ LR IDK GID L
Sbjct: 128 SENRWVRLRVSNAGLRLIDK-NGIDSVL 154
>gi|296840760|ref|ZP_06899339.1| 50S ribosomal subunit protein L28 [Neisseria polysaccharea ATCC
43768]
gi|296840040|gb|EFH23978.1| 50S ribosomal subunit protein L28 [Neisseria polysaccharea ATCC
43768]
Length = 99
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R++M R + GK GN VS NKT+R + PN+Q +R + +R +R++V+
Sbjct: 20 RLIMARVCK--VTGKRPMSGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNA 76
Query: 98 ALRCIDKAGGIDEYL 112
ALR IDK GID L
Sbjct: 77 ALRTIDKV-GIDVVL 90
>gi|348618259|ref|ZP_08884789.1| 50S ribosomal subunit protein L28 [Candidatus Glomeribacter
gigasporarum BEG34]
gi|347816506|emb|CCD29493.1| 50S ribosomal subunit protein L28 [Candidatus Glomeribacter
gigasporarum BEG34]
Length = 77
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK G+ VS NKTRR + PN+ +R++ +R IRV+++ ALR ID
Sbjct: 2 ARRCPVTGKRPMVGHHVSH-ANNKTRRRYLPNLHVRRIWIESENRAIRVRISNAALRLID 60
Query: 104 KAGG 107
K G
Sbjct: 61 KKGA 64
>gi|238650564|ref|YP_002916416.1| 50S ribosomal protein L28 [Rickettsia peacockii str. Rustic]
gi|259646749|sp|C4K1B7.1|RL28_RICPU RecName: Full=50S ribosomal protein L28
gi|238624662|gb|ACR47368.1| 50S ribosomal protein L28 [Rickettsia peacockii str. Rustic]
Length = 97
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G + +GN VS KTRR +KPN++ + S I R+ V + ++KAGG
Sbjct: 7 LTGVGVLYGNNVSHSQ-RKTRRRFKPNLRSVKFTSDITAGEYRLSVNARCISSVEKAGGF 65
Query: 109 DEYLLK 114
D Y+LK
Sbjct: 66 DAYILK 71
>gi|291300851|ref|YP_003512129.1| 50S ribosomal protein L28 [Stackebrandtia nassauensis DSM 44728]
gi|290570071|gb|ADD43036.1| ribosomal protein L28 [Stackebrandtia nassauensis DSM 44728]
Length = 78
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 56 FGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
FGN VS ++TRR W PN+Q +R + R IR++V+ A+R ID+ G
Sbjct: 14 FGNSVSHSA-HRTRRRWNPNLQRRRYWLPSQQRWIRLRVSAKAIRTIDRDG 63
>gi|384213902|ref|YP_005605065.1| 50S ribosomal protein L28 [Bradyrhizobium japonicum USDA 6]
gi|354952798|dbj|BAL05477.1| 50S ribosomal protein L28 [Bradyrhizobium japonicum USDA 6]
Length = 102
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R K G++VS KT+R + PN+ S + R++R++V+T+A++ +D
Sbjct: 2 SRRCELTAKGPLVGHKVSHSNI-KTKRRFLPNLVNVTFISEALGRNVRLRVSTNAVKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +LLK
Sbjct: 61 HNGGLDPFLLK 71
>gi|332530913|ref|ZP_08406837.1| 50S ribosomal protein L28 [Hylemonella gracilis ATCC 19624]
gi|332039601|gb|EGI76003.1| 50S ribosomal protein L28 [Hylemonella gracilis ATCC 19624]
Length = 77
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN +S NKT+R + PN+Q +R + +R +R++V++ ALR IDK GID
Sbjct: 9 GKKPMVGNNISH-ANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLIDK-NGIDS 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|346974121|gb|EGY17573.1| 54S ribosomal protein L24 [Verticillium dahliae VdLs.17]
Length = 281
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 34 VPD----SRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRH 89
+PD R++ ++ GL+A I+ GN +S D KT R W+PN+ KRL+S +
Sbjct: 54 IPDYPLGPRLIYKQSNGGLYATARIRRGNNISSDHKVKTPRAWRPNIHRKRLWSAALGVW 113
Query: 90 IR 91
+R
Sbjct: 114 MR 115
>gi|121599881|ref|YP_993944.1| 50S ribosomal protein L28 [Burkholderia mallei SAVP1]
gi|217419760|ref|ZP_03451266.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 576]
gi|238562658|ref|ZP_00440037.2| 50S ribosomal protein L28 [Burkholderia mallei GB8 horse 4]
gi|242314284|ref|ZP_04813300.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1106b]
gi|251766709|ref|ZP_04819772.1| 50S ribosomal protein L28 [Burkholderia mallei PRL-20]
gi|262193282|ref|YP_001081631.2| 50S ribosomal protein L28 [Burkholderia mallei NCTC 10247]
gi|386862665|ref|YP_006275614.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1026b]
gi|418390155|ref|ZP_12967952.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 354a]
gi|418534414|ref|ZP_13100257.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1026a]
gi|418554181|ref|ZP_13118977.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 354e]
gi|121228691|gb|ABM51209.1| 50S ribosomal protein L28 [Burkholderia mallei SAVP1]
gi|217397064|gb|EEC37080.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 576]
gi|238522152|gb|EEP85598.1| 50S ribosomal protein L28 [Burkholderia mallei GB8 horse 4]
gi|242137523|gb|EES23925.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1106b]
gi|243064992|gb|EES47178.1| 50S ribosomal protein L28 [Burkholderia mallei PRL-20]
gi|261835068|gb|ABO05945.2| 50S ribosomal protein L28 [Burkholderia mallei NCTC 10247]
gi|385359316|gb|EIF65283.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1026a]
gi|385370675|gb|EIF75909.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 354e]
gi|385375649|gb|EIF80405.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 354a]
gi|385659793|gb|AFI67216.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1026b]
Length = 163
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 31 KKCVPDSRIVMNRAKRGLFA------GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSY 84
K+ V R + R + L A GK GN VS NKT+R + PN+Q +R +
Sbjct: 69 KRTVTGDRTRIQRIRSALMARVCQVTGKAPMSGNNVSH-ANNKTKRRFLPNLQNRRFWVE 127
Query: 85 IMDRHIRVKVTTHALRCIDKAGGIDEYL 112
+R +R++V+ LR IDK GID L
Sbjct: 128 SENRWVRLRVSNAGLRLIDK-NGIDSVL 154
>gi|124266309|ref|YP_001020313.1| 50S ribosomal protein L28 [Methylibium petroleiphilum PM1]
gi|166226588|sp|A2SET9.1|RL28_METPP RecName: Full=50S ribosomal protein L28
gi|124259084|gb|ABM94078.1| LSU ribosomal protein L28P [Methylibium petroleiphilum PM1]
Length = 77
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + PN+Q +R + +R +R++VT ALR IDK G
Sbjct: 8 TGKGPMVGNNVSH-ANNKTKRRFLPNLQYRRFWLETENRWVRLRVTNAALRLIDKVG 63
>gi|301629813|ref|XP_002944028.1| PREDICTED: 50S ribosomal protein L28-like [Xenopus (Silurana)
tropicalis]
Length = 90
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN+VS NKT+R + PN+Q +R + +R +R++V++ ALR IDK GI+
Sbjct: 22 GKKPMVGNKVSH-ANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLIDK-NGIES 79
Query: 111 YL 112
L
Sbjct: 80 VL 81
>gi|254196472|ref|ZP_04902896.1| 50S ribosomal protein L28 [Burkholderia pseudomallei S13]
gi|169653215|gb|EDS85908.1| 50S ribosomal protein L28 [Burkholderia pseudomallei S13]
Length = 163
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 31 KKCVPDSRIVMNRAKRGLFA------GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSY 84
K+ V R + R + L A GK GN VS NKT+R + PN+Q +R +
Sbjct: 69 KRTVTGDRTRIQRIRSALMARVCQVTGKAPMSGNNVSH-ANNKTKRRFLPNLQNRRFWVE 127
Query: 85 IMDRHIRVKVTTHALRCIDKAGGIDEYL 112
+R +R++V+ LR IDK GID L
Sbjct: 128 SENRWVRLRVSNAGLRLIDK-NGIDSVL 154
>gi|346467177|gb|AEO33433.1| hypothetical protein [Amblyomma maculatum]
Length = 269
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 35 PDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKV 94
P + + G++ G+ I G + G + + P ++ L+S I+D+++RV V
Sbjct: 60 PIPVLYPKECQEGIWGGEGIVPGYKPCATGC--FVKFFTPLLKRVVLYSEILDKYMRVTV 117
Query: 95 TTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
T L I++ G D Y+LKTP + +++ L
Sbjct: 118 TQRTLLLINEHCGFDLYILKTPVQDLHSQLAL 149
>gi|380013018|ref|XP_003690568.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Apis
florea]
Length = 274
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
VP + +G++ G+ + G + W P +++ ++S ++D ++ V
Sbjct: 70 VPLPLLYPKEFHQGIWGGEAVIQGFTKKNKYARRHPHFWFPTLKKSVVYSEVLDTYLSVV 129
Query: 94 VTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+T + I++ G D YLLKTP + +E+ L
Sbjct: 130 ITNRTIDLINEHYGFDHYLLKTPACDLKSELAL 162
>gi|407938042|ref|YP_006853683.1| 50S ribosomal protein L28 [Acidovorax sp. KKS102]
gi|407895836|gb|AFU45045.1| 50S ribosomal protein L28 [Acidovorax sp. KKS102]
Length = 77
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V++ ALR IDK GID
Sbjct: 9 GKKPMTGNNVSH-ANNKTKRRFLPNLQYRRFWVESENRWVRLRVSSAALRLIDK-NGIDS 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|312795309|ref|YP_004028231.1| 50S ribosomal protein L28 [Burkholderia rhizoxinica HKI 454]
gi|312167084|emb|CBW74087.1| LSU ribosomal protein L28P [Burkholderia rhizoxinica HKI 454]
Length = 98
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A++ GK GN VS NKT+R + PN+Q +R + +R +R++V+ LR ID
Sbjct: 23 ARKCQVTGKAPMVGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAGLRLID 81
Query: 104 KAGGIDEYL 112
K GID L
Sbjct: 82 K-NGIDPVL 89
>gi|254494553|ref|ZP_05107724.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae 1291]
gi|268604467|ref|ZP_06138634.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID1]
gi|226513593|gb|EEH62938.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae 1291]
gi|268588598|gb|EEZ53274.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID1]
Length = 117
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R++M R + GK GN VS NKT+R + PN+Q +R + +R +R++V+
Sbjct: 38 RLIMARVCK--VTGKRPMSGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNA 94
Query: 98 ALRCIDKAGGIDEYL 112
ALR IDK GID L
Sbjct: 95 ALRTIDKV-GIDVVL 108
>gi|325267099|ref|ZP_08133768.1| 50S ribosomal protein L28 [Kingella denitrificans ATCC 33394]
gi|324981452|gb|EGC17095.1| 50S ribosomal protein L28 [Kingella denitrificans ATCC 33394]
Length = 78
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK GN VS NKT+R + PN+Q +R + +R +R++V+ ALR ID
Sbjct: 2 AKVCKITGKRPVSGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAALRTID 60
Query: 104 KAGGIDEYL 112
K GID L
Sbjct: 61 K-NGIDAVL 68
>gi|298369464|ref|ZP_06980781.1| ribosomal protein L28 [Neisseria sp. oral taxon 014 str. F0314]
gi|298282021|gb|EFI23509.1| ribosomal protein L28 [Neisseria sp. oral taxon 014 str. F0314]
Length = 77
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++++ ALR IDK GID
Sbjct: 9 GKRPMSGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRISNAALRTIDKV-GIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|15676238|ref|NP_273370.1| 50S ribosomal protein L28 [Neisseria meningitidis MC58]
gi|59802005|ref|YP_208717.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae FA 1090]
gi|121635542|ref|YP_975787.1| 50S ribosomal protein L28 [Neisseria meningitidis FAM18]
gi|161870749|ref|YP_001599922.1| 50S ribosomal protein L28 [Neisseria meningitidis 053442]
gi|218768902|ref|YP_002343414.1| 50S ribosomal protein L28 [Neisseria meningitidis Z2491]
gi|225076598|ref|ZP_03719797.1| hypothetical protein NEIFLAOT_01646 [Neisseria flavescens
NRL30031/H210]
gi|240014925|ref|ZP_04721838.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae DGI18]
gi|240017373|ref|ZP_04723913.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae FA6140]
gi|240121995|ref|ZP_04734957.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID24-1]
gi|241759287|ref|ZP_04757393.1| ribosomal protein L28 [Neisseria flavescens SK114]
gi|254805643|ref|YP_003083864.1| 50S ribosomal protein L28 [Neisseria meningitidis alpha14]
gi|255067972|ref|ZP_05319827.1| ribosomal protein L28 [Neisseria sicca ATCC 29256]
gi|261378369|ref|ZP_05982942.1| ribosomal protein L28 [Neisseria cinerea ATCC 14685]
gi|261379983|ref|ZP_05984556.1| ribosomal protein L28 [Neisseria subflava NJ9703]
gi|268595580|ref|ZP_06129747.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae 35/02]
gi|268597615|ref|ZP_06131782.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae FA19]
gi|268599866|ref|ZP_06134033.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae MS11]
gi|268602201|ref|ZP_06136368.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID18]
gi|268682920|ref|ZP_06149782.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID332]
gi|268685086|ref|ZP_06151948.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae SK-92-679]
gi|268687349|ref|ZP_06154211.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae SK-93-1035]
gi|291042961|ref|ZP_06568699.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae DGI2]
gi|293398307|ref|ZP_06642498.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae F62]
gi|319639310|ref|ZP_07994061.1| 50S ribosomal protein L28 [Neisseria mucosa C102]
gi|340361460|ref|ZP_08683886.1| 50S ribosomal protein L28 [Neisseria macacae ATCC 33926]
gi|349608948|ref|ZP_08888360.1| hypothetical protein HMPREF1028_00335 [Neisseria sp. GT4A_CT1]
gi|385323460|ref|YP_005877899.1| 50S ribosomal protein L28 [Neisseria meningitidis 8013]
gi|385327680|ref|YP_005881983.1| 50S ribosomal protein L28 [Neisseria meningitidis alpha710]
gi|385338789|ref|YP_005892662.1| 50S ribosomal protein L28 [Neisseria meningitidis WUE 2594]
gi|385340744|ref|YP_005894616.1| 50S ribosomal protein L28 [Neisseria meningitidis G2136]
gi|385342652|ref|YP_005896523.1| 50S ribosomal protein L28 [Neisseria meningitidis M01-240149]
gi|385850576|ref|YP_005897091.1| 50S ribosomal protein L28 [Neisseria meningitidis M04-240196]
gi|385852511|ref|YP_005899025.1| 50S ribosomal protein L28 [Neisseria meningitidis H44/76]
gi|385854494|ref|YP_005901007.1| 50S ribosomal protein L28 [Neisseria meningitidis M01-240355]
gi|385857962|ref|YP_005904474.1| 50S ribosomal protein L28 [Neisseria meningitidis NZ-05/33]
gi|416159407|ref|ZP_11605867.1| ribosomal protein L28 [Neisseria meningitidis N1568]
gi|416176514|ref|ZP_11609686.1| ribosomal protein L28 [Neisseria meningitidis M6190]
gi|416181596|ref|ZP_11611712.1| ribosomal protein L28 [Neisseria meningitidis M13399]
gi|416186423|ref|ZP_11613703.1| ribosomal protein L28 [Neisseria meningitidis M0579]
gi|416190306|ref|ZP_11615689.1| ribosomal protein L28 [Neisseria meningitidis ES14902]
gi|416195118|ref|ZP_11617605.1| ribosomal protein L28 [Neisseria meningitidis CU385]
gi|416211937|ref|ZP_11621593.1| ribosomal protein L28 [Neisseria meningitidis M01-240013]
gi|418287533|ref|ZP_12900120.1| ribosomal protein L28 [Neisseria meningitidis NM233]
gi|418289784|ref|ZP_12902022.1| ribosomal protein L28 [Neisseria meningitidis NM220]
gi|421537361|ref|ZP_15983548.1| ribosomal protein L28 [Neisseria meningitidis 93003]
gi|421539521|ref|ZP_15985681.1| ribosomal protein L28 [Neisseria meningitidis 93004]
gi|421541663|ref|ZP_15987779.1| ribosomal protein L28 [Neisseria meningitidis NM255]
gi|421543718|ref|ZP_15989808.1| ribosomal protein L28 [Neisseria meningitidis NM140]
gi|421545782|ref|ZP_15991841.1| ribosomal protein L28 [Neisseria meningitidis NM183]
gi|421547849|ref|ZP_15993880.1| ribosomal protein L28 [Neisseria meningitidis NM2781]
gi|421549878|ref|ZP_15995886.1| ribosomal protein L28 [Neisseria meningitidis 69166]
gi|421552060|ref|ZP_15998040.1| ribosomal protein L28 [Neisseria meningitidis NM576]
gi|421554074|ref|ZP_16000024.1| ribosomal protein L28 [Neisseria meningitidis 98008]
gi|421556316|ref|ZP_16002232.1| ribosomal protein L28 [Neisseria meningitidis 80179]
gi|421558382|ref|ZP_16004264.1| ribosomal protein L28 [Neisseria meningitidis 92045]
gi|421560483|ref|ZP_16006341.1| ribosomal protein L28 [Neisseria meningitidis NM2657]
gi|421562537|ref|ZP_16008363.1| ribosomal protein L28 [Neisseria meningitidis NM2795]
gi|421564629|ref|ZP_16010427.1| ribosomal protein L28 [Neisseria meningitidis NM3081]
gi|421566749|ref|ZP_16012490.1| ribosomal protein L28 [Neisseria meningitidis NM3001]
gi|421907490|ref|ZP_16337366.1| 50S ribosomal protein L28 [Neisseria meningitidis alpha704]
gi|422110582|ref|ZP_16380556.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|433464300|ref|ZP_20421793.1| ribosomal protein L28 [Neisseria meningitidis NM422]
gi|433466426|ref|ZP_20423888.1| ribosomal protein L28 [Neisseria meningitidis 87255]
gi|433468550|ref|ZP_20425986.1| ribosomal protein L28 [Neisseria meningitidis 98080]
gi|433470626|ref|ZP_20428025.1| ribosomal protein L28 [Neisseria meningitidis 68094]
gi|433472703|ref|ZP_20430072.1| ribosomal protein L28 [Neisseria meningitidis 97021]
gi|433474798|ref|ZP_20432145.1| ribosomal protein L28 [Neisseria meningitidis 88050]
gi|433476897|ref|ZP_20434224.1| ribosomal protein L28 [Neisseria meningitidis 70012]
gi|433479038|ref|ZP_20436336.1| ribosomal protein L28 [Neisseria meningitidis 63041]
gi|433481127|ref|ZP_20438398.1| ribosomal protein L28 [Neisseria meningitidis 2006087]
gi|433483238|ref|ZP_20440475.1| ribosomal protein L28 [Neisseria meningitidis 2002038]
gi|433485351|ref|ZP_20442556.1| ribosomal protein L28 [Neisseria meningitidis 97014]
gi|433487505|ref|ZP_20444683.1| ribosomal protein L28 [Neisseria meningitidis M13255]
gi|433489680|ref|ZP_20446818.1| ribosomal protein L28 [Neisseria meningitidis NM418]
gi|433491823|ref|ZP_20448923.1| ribosomal protein L28 [Neisseria meningitidis NM586]
gi|433493907|ref|ZP_20450982.1| ribosomal protein L28 [Neisseria meningitidis NM762]
gi|433496086|ref|ZP_20453134.1| ribosomal protein L28 [Neisseria meningitidis M7089]
gi|433498172|ref|ZP_20455187.1| ribosomal protein L28 [Neisseria meningitidis M7124]
gi|433500105|ref|ZP_20457095.1| ribosomal protein L28 [Neisseria meningitidis NM174]
gi|433502314|ref|ZP_20459284.1| ribosomal protein L28 [Neisseria meningitidis NM126]
gi|433504283|ref|ZP_20461227.1| ribosomal protein L28 [Neisseria meningitidis 9506]
gi|433506463|ref|ZP_20463381.1| ribosomal protein L28 [Neisseria meningitidis 9757]
gi|433508494|ref|ZP_20465378.1| ribosomal protein L28 [Neisseria meningitidis 12888]
gi|433510576|ref|ZP_20467418.1| ribosomal protein L28 [Neisseria meningitidis 4119]
gi|433512682|ref|ZP_20469483.1| ribosomal protein L28 [Neisseria meningitidis 63049]
gi|433514927|ref|ZP_20471702.1| ribosomal protein L28 [Neisseria meningitidis 2004090]
gi|433516908|ref|ZP_20473660.1| ribosomal protein L28 [Neisseria meningitidis 96023]
gi|433519098|ref|ZP_20475822.1| ribosomal protein L28 [Neisseria meningitidis 65014]
gi|433521110|ref|ZP_20477810.1| ribosomal protein L28 [Neisseria meningitidis 61103]
gi|433523236|ref|ZP_20479907.1| ribosomal protein L28 [Neisseria meningitidis 97020]
gi|433525375|ref|ZP_20482019.1| ribosomal protein L28 [Neisseria meningitidis 69096]
gi|433528774|ref|ZP_20485381.1| ribosomal protein L28 [Neisseria meningitidis NM3652]
gi|433529581|ref|ZP_20486179.1| ribosomal protein L28 [Neisseria meningitidis NM3642]
gi|433531698|ref|ZP_20488266.1| ribosomal protein L28 [Neisseria meningitidis 2007056]
gi|433533888|ref|ZP_20490436.1| ribosomal protein L28 [Neisseria meningitidis 2001212]
gi|433535976|ref|ZP_20492494.1| ribosomal protein L28 [Neisseria meningitidis 77221]
gi|433538080|ref|ZP_20494566.1| ribosomal protein L28 [Neisseria meningitidis 70030]
gi|433540253|ref|ZP_20496709.1| ribosomal protein L28 [Neisseria meningitidis 63006]
gi|54039149|sp|P66151.1|RL28_NEIMB RecName: Full=50S ribosomal protein L28
gi|54041850|sp|P66150.1|RL28_NEIMA RecName: Full=50S ribosomal protein L28
gi|67461225|sp|Q5F682.1|RL28_NEIG1 RecName: Full=50S ribosomal protein L28
gi|166226589|sp|A1KVW2.1|RL28_NEIMF RecName: Full=50S ribosomal protein L28
gi|189029447|sp|A9M300.1|RL28_NEIM0 RecName: Full=50S ribosomal protein L28
gi|7225542|gb|AAF40766.1| 50S ribosomal protein L28 [Neisseria meningitidis MC58]
gi|59718900|gb|AAW90305.1| putative 50S ribosomal protein L28 [Neisseria gonorrhoeae FA 1090]
gi|120867248|emb|CAM11017.1| 50S ribosomal protein L28 [Neisseria meningitidis FAM18]
gi|121052910|emb|CAM09262.1| 50S ribosomal protein L28 [Neisseria meningitidis Z2491]
gi|161596302|gb|ABX73962.1| 50S ribosomal protein L28 [Neisseria meningitidis 053442]
gi|224952098|gb|EEG33307.1| hypothetical protein NEIFLAOT_01646 [Neisseria flavescens
NRL30031/H210]
gi|241320423|gb|EER56720.1| ribosomal protein L28 [Neisseria flavescens SK114]
gi|254669185|emb|CBA07933.1| 50S ribosomal protein L28 [Neisseria meningitidis alpha14]
gi|255047749|gb|EET43213.1| ribosomal protein L28 [Neisseria sicca ATCC 29256]
gi|261391847|emb|CAX49306.1| 50S ribosomal protein L28 [Neisseria meningitidis 8013]
gi|268548969|gb|EEZ44387.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae 35/02]
gi|268551403|gb|EEZ46422.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae FA19]
gi|268583997|gb|EEZ48673.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae MS11]
gi|268586332|gb|EEZ51008.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID18]
gi|268623204|gb|EEZ55604.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae PID332]
gi|268625370|gb|EEZ57770.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae SK-92-679]
gi|268627633|gb|EEZ60033.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae SK-93-1035]
gi|269145479|gb|EEZ71897.1| ribosomal protein L28 [Neisseria cinerea ATCC 14685]
gi|284797182|gb|EFC52529.1| ribosomal protein L28 [Neisseria subflava NJ9703]
gi|291013100|gb|EFE05069.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae DGI2]
gi|291611231|gb|EFF40315.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae F62]
gi|308388532|gb|ADO30852.1| 50S ribosomal protein L28 [Neisseria meningitidis alpha710]
gi|309378671|emb|CBX22742.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|317399494|gb|EFV80164.1| 50S ribosomal protein L28 [Neisseria mucosa C102]
gi|319411203|emb|CBY91608.1| 50S ribosomal protein L28 [Neisseria meningitidis WUE 2594]
gi|325128907|gb|EGC51761.1| ribosomal protein L28 [Neisseria meningitidis N1568]
gi|325133013|gb|EGC55688.1| ribosomal protein L28 [Neisseria meningitidis M6190]
gi|325134999|gb|EGC57629.1| ribosomal protein L28 [Neisseria meningitidis M13399]
gi|325136897|gb|EGC59494.1| ribosomal protein L28 [Neisseria meningitidis M0579]
gi|325139002|gb|EGC61550.1| ribosomal protein L28 [Neisseria meningitidis ES14902]
gi|325141046|gb|EGC63551.1| ribosomal protein L28 [Neisseria meningitidis CU385]
gi|325145210|gb|EGC67491.1| ribosomal protein L28 [Neisseria meningitidis M01-240013]
gi|325198988|gb|ADY94444.1| ribosomal protein L28 [Neisseria meningitidis G2136]
gi|325199515|gb|ADY94970.1| ribosomal protein L28 [Neisseria meningitidis H44/76]
gi|325202858|gb|ADY98312.1| ribosomal protein L28 [Neisseria meningitidis M01-240149]
gi|325203435|gb|ADY98888.1| ribosomal protein L28 [Neisseria meningitidis M01-240355]
gi|325205399|gb|ADZ00852.1| ribosomal protein L28 [Neisseria meningitidis M04-240196]
gi|325208851|gb|ADZ04303.1| ribosomal protein L28 [Neisseria meningitidis NZ-05/33]
gi|339888559|gb|EGQ78004.1| 50S ribosomal protein L28 [Neisseria macacae ATCC 33926]
gi|348613295|gb|EGY62886.1| hypothetical protein HMPREF1028_00335 [Neisseria sp. GT4A_CT1]
gi|372202890|gb|EHP16647.1| ribosomal protein L28 [Neisseria meningitidis NM220]
gi|372203667|gb|EHP17291.1| ribosomal protein L28 [Neisseria meningitidis NM233]
gi|389604959|emb|CCA43884.1| 50S ribosomal protein L28 [Neisseria meningitidis alpha522]
gi|393291448|emb|CCI73358.1| 50S ribosomal protein L28 [Neisseria meningitidis alpha704]
gi|402319293|gb|EJU54803.1| ribosomal protein L28 [Neisseria meningitidis 93003]
gi|402319511|gb|EJU55019.1| ribosomal protein L28 [Neisseria meningitidis NM255]
gi|402321166|gb|EJU56642.1| ribosomal protein L28 [Neisseria meningitidis 93004]
gi|402325178|gb|EJU60589.1| ribosomal protein L28 [Neisseria meningitidis NM183]
gi|402326007|gb|EJU61413.1| ribosomal protein L28 [Neisseria meningitidis NM140]
gi|402327191|gb|EJU62582.1| ribosomal protein L28 [Neisseria meningitidis NM2781]
gi|402331296|gb|EJU66635.1| ribosomal protein L28 [Neisseria meningitidis 69166]
gi|402332608|gb|EJU67932.1| ribosomal protein L28 [Neisseria meningitidis NM576]
gi|402333701|gb|EJU69000.1| ribosomal protein L28 [Neisseria meningitidis 98008]
gi|402337662|gb|EJU72909.1| ribosomal protein L28 [Neisseria meningitidis 80179]
gi|402338202|gb|EJU73439.1| ribosomal protein L28 [Neisseria meningitidis 92045]
gi|402340033|gb|EJU75237.1| ribosomal protein L28 [Neisseria meningitidis NM2657]
gi|402342681|gb|EJU77839.1| ribosomal protein L28 [Neisseria meningitidis NM2795]
gi|402344692|gb|EJU79825.1| ribosomal protein L28 [Neisseria meningitidis NM3001]
gi|402345897|gb|EJU81002.1| ribosomal protein L28 [Neisseria meningitidis NM3081]
gi|432204815|gb|ELK60849.1| ribosomal protein L28 [Neisseria meningitidis 87255]
gi|432205718|gb|ELK61739.1| ribosomal protein L28 [Neisseria meningitidis NM422]
gi|432206131|gb|ELK62143.1| ribosomal protein L28 [Neisseria meningitidis 98080]
gi|432211674|gb|ELK67622.1| ribosomal protein L28 [Neisseria meningitidis 68094]
gi|432212142|gb|ELK68084.1| ribosomal protein L28 [Neisseria meningitidis 97021]
gi|432212307|gb|ELK68246.1| ribosomal protein L28 [Neisseria meningitidis 88050]
gi|432217084|gb|ELK72954.1| ribosomal protein L28 [Neisseria meningitidis 70012]
gi|432218392|gb|ELK74250.1| ribosomal protein L28 [Neisseria meningitidis 63041]
gi|432218706|gb|ELK74559.1| ribosomal protein L28 [Neisseria meningitidis 2006087]
gi|432222808|gb|ELK78591.1| ribosomal protein L28 [Neisseria meningitidis 2002038]
gi|432224263|gb|ELK80029.1| ribosomal protein L28 [Neisseria meningitidis 97014]
gi|432225778|gb|ELK81517.1| ribosomal protein L28 [Neisseria meningitidis M13255]
gi|432230155|gb|ELK85833.1| ribosomal protein L28 [Neisseria meningitidis NM418]
gi|432230224|gb|ELK85901.1| ribosomal protein L28 [Neisseria meningitidis NM586]
gi|432231698|gb|ELK87356.1| ribosomal protein L28 [Neisseria meningitidis NM762]
gi|432236453|gb|ELK92060.1| ribosomal protein L28 [Neisseria meningitidis M7124]
gi|432237192|gb|ELK92790.1| ribosomal protein L28 [Neisseria meningitidis M7089]
gi|432237292|gb|ELK92887.1| ribosomal protein L28 [Neisseria meningitidis NM174]
gi|432242988|gb|ELK98503.1| ribosomal protein L28 [Neisseria meningitidis NM126]
gi|432243180|gb|ELK98694.1| ribosomal protein L28 [Neisseria meningitidis 9506]
gi|432244096|gb|ELK99597.1| ribosomal protein L28 [Neisseria meningitidis 9757]
gi|432249518|gb|ELL04922.1| ribosomal protein L28 [Neisseria meningitidis 12888]
gi|432249761|gb|ELL05161.1| ribosomal protein L28 [Neisseria meningitidis 63049]
gi|432250152|gb|ELL05549.1| ribosomal protein L28 [Neisseria meningitidis 4119]
gi|432255746|gb|ELL11074.1| ribosomal protein L28 [Neisseria meningitidis 96023]
gi|432255987|gb|ELL11313.1| ribosomal protein L28 [Neisseria meningitidis 2004090]
gi|432256602|gb|ELL11923.1| ribosomal protein L28 [Neisseria meningitidis 65014]
gi|432262148|gb|ELL17392.1| ribosomal protein L28 [Neisseria meningitidis 61103]
gi|432262428|gb|ELL17667.1| ribosomal protein L28 [Neisseria meningitidis 97020]
gi|432263161|gb|ELL18386.1| ribosomal protein L28 [Neisseria meningitidis 69096]
gi|432263878|gb|ELL19088.1| ribosomal protein L28 [Neisseria meningitidis NM3652]
gi|432269177|gb|ELL24339.1| ribosomal protein L28 [Neisseria meningitidis 2007056]
gi|432269435|gb|ELL24593.1| ribosomal protein L28 [Neisseria meningitidis NM3642]
gi|432273132|gb|ELL28231.1| ribosomal protein L28 [Neisseria meningitidis 2001212]
gi|432275756|gb|ELL30823.1| ribosomal protein L28 [Neisseria meningitidis 70030]
gi|432276222|gb|ELL31283.1| ribosomal protein L28 [Neisseria meningitidis 77221]
gi|432277902|gb|ELL32947.1| ribosomal protein L28 [Neisseria meningitidis 63006]
Length = 77
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V+ ALR IDK GID
Sbjct: 9 GKRPMSGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAALRTIDKV-GIDV 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|406705646|ref|YP_006755999.1| 50S ribosomal protein L28 [alpha proteobacterium HIMB5]
gi|406651422|gb|AFS46822.1| ribosomal protein L28 [alpha proteobacterium HIMB5]
Length = 117
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
+P V +K+ GK G+ VS NKT+R + PN+++ + S ++ R +++
Sbjct: 4 LPLYSAVNTMSKKCELTGKIPMKGHNVSH-ANNKTKRRFLPNLKKVKFTSELLKRSLKIT 62
Query: 94 VTTHALRCIDKAGGIDEYL 112
V+ +R +DK G DE+L
Sbjct: 63 VSNAGVRTVDKKGSFDEFL 81
>gi|348176960|ref|ZP_08883854.1| 50S ribosomal protein L28 [Saccharopolyspora spinosa NRRL 18395]
Length = 78
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 46 RGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKA 105
R GK +GN+VS ++TRR W PNVQ +R + +R IR++V+T ++ I+K
Sbjct: 4 RCQVTGKKPGYGNQVSHSN-HRTRRRWLPNVQRRRYWLPSENRWIRLRVSTKGMKTIEKR 62
Query: 106 G 106
G
Sbjct: 63 G 63
>gi|270006114|gb|EFA02562.1| hypothetical protein TcasGA2_TC008271 [Tribolium castaneum]
Length = 258
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%)
Query: 35 PDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKV 94
P I A ++ G+ I G ++ + + W P+++ ++S +++++I V V
Sbjct: 70 PIPVIYPKEAHEQMWGGEGIVQGFQIRDWRRRRVPHFWMPHLKRSVVYSEVLNKYISVVV 129
Query: 95 TTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKI 132
T + I+ G D YLLKTP + + L K KI
Sbjct: 130 TERTISLINSNYGFDHYLLKTPACDLKALLPLTLKRKI 167
>gi|344302928|gb|EGW33202.1| hypothetical protein SPAPADRAFT_60532 [Spathaspora passalidarum
NRRL Y-27907]
Length = 266
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 39 IVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHA 98
+ R RGL+ G + SE NKT R PN+++ +L+S + + I+ K +T
Sbjct: 84 LYFKRQNRGLYGGLQRRVTASRSE-YLNKTLRVQLPNIRKTKLWSEALQKSIKTKASTKV 142
Query: 99 LRCIDKAGGIDEYLLK 114
L+ I + GG+D+YL K
Sbjct: 143 LKTITREGGLDKYLTK 158
>gi|436834636|ref|YP_007319852.1| ribosomal protein L28 [Fibrella aestuarina BUZ 2]
gi|384066049|emb|CCG99259.1| ribosomal protein L28 [Fibrella aestuarina BUZ 2]
Length = 79
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK Q GN VS N+T+R + PN+Q KR F I +KV+T A++ I+K G
Sbjct: 7 ITGKRTQVGNNVSH-ANNRTKRKFYPNLQTKRFFVESTGEWITLKVSTSAIKTINKKG 63
>gi|393759410|ref|ZP_10348225.1| 50S ribosomal protein L28 [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
gi|424776426|ref|ZP_18203407.1| 50S ribosomal protein L28 [Alcaligenes sp. HPC1271]
gi|393162299|gb|EJC62358.1| 50S ribosomal protein L28 [Alcaligenes faecalis subsp. faecalis
NCIB 8687]
gi|422888246|gb|EKU30635.1| 50S ribosomal protein L28 [Alcaligenes sp. HPC1271]
Length = 78
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKT+R + PN+Q +R + +R +R++V+ +A+R IDK GID
Sbjct: 8 TGKGPMSGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSANAIRTIDK-NGID 65
Query: 110 EYL 112
L
Sbjct: 66 SVL 68
>gi|148652401|ref|YP_001279494.1| 50S ribosomal protein L28 [Psychrobacter sp. PRwf-1]
gi|172048504|sp|A5WD03.1|RL28_PSYWF RecName: Full=50S ribosomal protein L28
gi|148571485|gb|ABQ93544.1| LSU ribosomal protein L28P [Psychrobacter sp. PRwf-1]
Length = 78
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK Q GN VS NKTRR + PN+ R + +R +R++V+T +R IDK GID
Sbjct: 8 TGKRPQVGNNVSH-AHNKTRRRFLPNLHNHRFWVESENRFVRLRVSTKGMRIIDKH-GID 65
Query: 110 EYL 112
+ L
Sbjct: 66 KVL 68
>gi|226939473|ref|YP_002794546.1| 50S ribosomal protein L28 [Laribacter hongkongensis HLHK9]
gi|254801365|sp|C1DCC0.1|RL28_LARHH RecName: Full=50S ribosomal protein L28
gi|226714399|gb|ACO73537.1| RpmB [Laribacter hongkongensis HLHK9]
Length = 77
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V+ ALR IDK GID
Sbjct: 9 GKRPMVGNNVSH-ANNKTKRRFLPNLQYRRFWVESENRWVRMRVSNAALRTIDKV-GIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|53803464|ref|YP_114755.1| 50S ribosomal protein L28 [Methylococcus capsulatus str. Bath]
gi|67461354|sp|Q605E5.1|RL28_METCA RecName: Full=50S ribosomal protein L28
gi|53757225|gb|AAU91516.1| ribosomal protein L28 [Methylococcus capsulatus str. Bath]
Length = 78
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK G+ VS NKT+R + PN+ E+R + +R +R+KV+ H LR IDK GID
Sbjct: 8 TGKRRIVGHNVSH-ANNKTKRLFNPNLHERRFWVESENRWVRLKVSNHGLRVIDKC-GID 65
Query: 110 EYL 112
L
Sbjct: 66 AVL 68
>gi|422319525|ref|ZP_16400599.1| 50S ribosomal protein L28 [Achromobacter xylosoxidans C54]
gi|317405790|gb|EFV86080.1| 50S ribosomal protein L28 [Achromobacter xylosoxidans C54]
Length = 78
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V+ A+R IDK GID
Sbjct: 9 GKGPMVGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSAKAIRTIDK-NGIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|311107980|ref|YP_003980833.1| 50S ribosomal protein L28 [Achromobacter xylosoxidans A8]
gi|310762669|gb|ADP18118.1| ribosomal protein L28 [Achromobacter xylosoxidans A8]
Length = 78
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V+ A+R IDK GID
Sbjct: 9 GKGPMVGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSAKAIRTIDK-NGIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|404380082|ref|ZP_10985125.1| 50S ribosomal protein L28 [Simonsiella muelleri ATCC 29453]
gi|294482551|gb|EFG30242.1| 50S ribosomal protein L28 [Simonsiella muelleri ATCC 29453]
Length = 78
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK GN VS NKT+R + PN+Q +R + +R +R++V+ ALR ID
Sbjct: 2 AKVCKVTGKRPMSGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAALRTID 60
Query: 104 KAGGIDEYL 112
K GID L
Sbjct: 61 K-NGIDVVL 68
>gi|288939948|ref|YP_003442188.1| 50S ribosomal protein L28 [Allochromatium vinosum DSM 180]
gi|288895320|gb|ADC61156.1| ribosomal protein L28 [Allochromatium vinosum DSM 180]
Length = 78
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+ EKR + R +++++TT A+R IDK GI
Sbjct: 7 VTGKRPLTGNNVSH-ANNKTKRRFLPNLHEKRFWVEAEKRWVKLRLTTKAMRTIDKK-GI 64
Query: 109 DEYLL 113
D L+
Sbjct: 65 DAVLV 69
>gi|110764475|ref|XP_395930.3| PREDICTED: 39S ribosomal protein L28, mitochondrial [Apis
mellifera]
Length = 274
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 45/93 (48%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
+P + +G++ G+ + G + W P +++ ++S ++D ++ V
Sbjct: 70 IPLPLLYPKEFHQGIWGGEAVIQGFTKKNKYARRHPHFWFPTLKKSVVYSEVLDTYLSVV 129
Query: 94 VTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
+T + I++ G D YLLKTP + +E+ L
Sbjct: 130 ITNRTIDLINEHYGFDHYLLKTPACDLKSELAL 162
>gi|359799618|ref|ZP_09302176.1| 50S ribosomal protein L28 [Achromobacter arsenitoxydans SY8]
gi|423013338|ref|ZP_17004059.1| 50S ribosomal protein L28 [Achromobacter xylosoxidans AXX-A]
gi|338783660|gb|EGP48021.1| 50S ribosomal protein L28 [Achromobacter xylosoxidans AXX-A]
gi|359362431|gb|EHK64170.1| 50S ribosomal protein L28 [Achromobacter arsenitoxydans SY8]
Length = 78
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V+ A+R IDK GID
Sbjct: 9 GKGPMVGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSAKAIRTIDK-NGIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|291613167|ref|YP_003523324.1| ribosomal protein L28 [Sideroxydans lithotrophicus ES-1]
gi|291583279|gb|ADE10937.1| ribosomal protein L28 [Sideroxydans lithotrophicus ES-1]
Length = 78
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN +S NKT+R + PN+Q +RL+ +R + +++T ALR IDK GID
Sbjct: 8 TGKKPMVGNNISH-ANNKTKRRFLPNLQRRRLWVESENRWVSLRLTNAALRTIDK-NGID 65
Query: 110 EYLL 113
L
Sbjct: 66 AVLF 69
>gi|294505837|ref|YP_003569895.1| 50S ribosomal protein L28 [Salinibacter ruber M8]
gi|294342165|emb|CBH22943.1| 50S Ribosomal protein L28 [Salinibacter ruber M8]
Length = 166
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 36 DSRIVMNRAKRGLFA------GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRH 89
D+ NR KR + A G+ GN VS D KT R +K N+ EKR + DRH
Sbjct: 76 DTSTDTNRPKRCVMARKDDVTGEGPVTGNSVS-DSNQKTNRRFKRNLHEKRFYIPSEDRH 134
Query: 90 IRVKVTTHALRCIDKAG 106
+++KV++ L+ I+K G
Sbjct: 135 VKLKVSSKTLKTINKKG 151
>gi|300776246|ref|ZP_07086104.1| 50S ribosomal protein L28 [Chryseobacterium gleum ATCC 35910]
gi|300501756|gb|EFK32896.1| 50S ribosomal protein L28 [Chryseobacterium gleum ATCC 35910]
Length = 80
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R ++ N+ EK+ + D+H+ +KV+ H LR I+K G
Sbjct: 7 ITGKRAMVGNNVSH-ANNKTKRRFEINLLEKKFYLPEQDKHVTLKVSAHGLRVINKIG 63
>gi|346466177|gb|AEO32933.1| hypothetical protein [Amblyomma maculatum]
Length = 271
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 35 PDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKV 94
P + + G++ G+ I G + G + + P ++ L+S I+D+++RV V
Sbjct: 62 PIPVLYPKECQEGIWGGEGIVPGYKPCATGC--FVKFFTPLLKRVVLYSEILDKYMRVTV 119
Query: 95 TTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
T L I++ G D Y+LKTP + +++ L
Sbjct: 120 TQRTLLLINEHCGFDLYILKTPVQDLHSQLAL 151
>gi|381172320|ref|ZP_09881451.1| ribosomal protein L28 [Xanthomonas citri pv. mangiferaeindicae LMG
941]
gi|384425917|ref|YP_005635274.1| 50S ribosomal protein L28 [Xanthomonas campestris pv. raphani 756C]
gi|390992907|ref|ZP_10263117.1| ribosomal protein L28 [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|341935017|gb|AEL05156.1| ribosomal protein L28 [Xanthomonas campestris pv. raphani 756C]
gi|372552344|emb|CCF70092.1| ribosomal protein L28 [Xanthomonas axonopodis pv. punicae str. LMG
859]
gi|380687269|emb|CCG37938.1| ribosomal protein L28 [Xanthomonas citri pv. mangiferaeindicae LMG
941]
Length = 67
Score = 45.4 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 54 IQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYL 112
+Q GN VS N+TRR + PN+ E+R + +R ++++V+ HALR IDK GID L
Sbjct: 1 MQTGNNVSH-ANNRTRRRFLPNLHERRFWVASENRWVKLRVSAHALRTIDK-NGIDAVL 57
>gi|421482478|ref|ZP_15930059.1| 50S ribosomal protein L28 [Achromobacter piechaudii HLE]
gi|400199274|gb|EJO32229.1| 50S ribosomal protein L28 [Achromobacter piechaudii HLE]
Length = 78
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V+ A+R IDK GID
Sbjct: 9 GKGPMVGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSAKAIRTIDK-NGIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|377819997|ref|YP_004976368.1| 50S ribosomal protein L28 [Burkholderia sp. YI23]
gi|413963430|ref|ZP_11402657.1| 50S ribosomal protein L28 [Burkholderia sp. SJ98]
gi|357934832|gb|AET88391.1| 50S ribosomal protein L28 [Burkholderia sp. YI23]
gi|413929262|gb|EKS68550.1| 50S ribosomal protein L28 [Burkholderia sp. SJ98]
Length = 77
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R F +R +R++V+ LR IDK GID
Sbjct: 9 GKGPMSGNNVSH-ANNKTKRRFLPNLQNRRFFVESENRWVRLRVSNAGLRLIDK-NGIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|154246139|ref|YP_001417097.1| 50S ribosomal protein L28 [Xanthobacter autotrophicus Py2]
gi|226699185|sp|A7IHE7.1|RL28_XANP2 RecName: Full=50S ribosomal protein L28
gi|154160224|gb|ABS67440.1| ribosomal protein L28 [Xanthobacter autotrophicus Py2]
Length = 100
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + G+ VS +KT+R + PN+ L S + R IR++V+ +AL+ +D
Sbjct: 2 SRRCDLTGKGVLSGHTVSH-SNHKTKRRFLPNLCNVTLESETLKRTIRLRVSANALKSVD 60
Query: 104 KAGGIDEYLLK 114
GG+D +L K
Sbjct: 61 HRGGLDAFLKK 71
>gi|146329689|ref|YP_001208992.1| 50S ribosomal protein L28 [Dichelobacter nodosus VCS1703A]
gi|166226570|sp|A5EWV8.1|RL28_DICNV RecName: Full=50S ribosomal protein L28
gi|146233159|gb|ABQ14137.1| 50S ribosomal protein L28 [Dichelobacter nodosus VCS1703A]
Length = 78
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NK +R + PN+QE R + +R I +KV+ H +R IDK GID
Sbjct: 8 TGKKPMVGNTVSH-ANNKGKRRFLPNIQEHRFWVQSENRFITLKVSAHGMRIIDKK-GID 65
Query: 110 EYL 112
L
Sbjct: 66 AVL 68
>gi|121606104|ref|YP_983433.1| 50S ribosomal protein L28 [Polaromonas naphthalenivorans CJ2]
gi|166226597|sp|A1VS84.1|RL28_POLNA RecName: Full=50S ribosomal protein L28
gi|120595073|gb|ABM38512.1| LSU ribosomal protein L28P [Polaromonas naphthalenivorans CJ2]
Length = 77
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q +R++ +R +R+++T LR IDK GI
Sbjct: 7 VTGKGPMVGNNVSH-ANNKTKRRFMPNLQYRRIWVESENRWVRLRITAAGLRLIDK-NGI 64
Query: 109 DEYLL 113
D L+
Sbjct: 65 DAVLV 69
>gi|365922181|ref|ZP_09446413.1| ribosomal protein L28 [Cardiobacterium valvarum F0432]
gi|364574773|gb|EHM52214.1| ribosomal protein L28 [Cardiobacterium valvarum F0432]
Length = 78
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NK +R + PN+Q R + +R +++KV+TH +R IDK GID
Sbjct: 8 TGKKPMVGNTVSH-ANNKNKRRFLPNIQVHRFWVESENRFVKLKVSTHGMRIIDKK-GID 65
Query: 110 EYL 112
L
Sbjct: 66 AVL 68
>gi|253795690|ref|YP_003038786.1| putative 50S ribosomal subunit protein L28 [Candidatus Hodgkinia
cicadicola Dsem]
gi|253739998|gb|ACT34333.1| putative 50S ribosomal subunit protein L28 [Candidatus Hodgkinia
cicadicola Dsem]
Length = 91
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 56 FGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYL--- 112
FG RVS KT+R +KPN + +L+S +++R + K +R + K GG+D Y+
Sbjct: 12 FGARVSHSN-KKTKRKFKPNAVKTKLWSLVLNRFVSFKARARFVREVRKYGGVDFYVVNR 70
Query: 113 --LKTPYHKMDTEM 124
+ P K+ +M
Sbjct: 71 KRMPKPLLKLKLQM 84
>gi|429462521|ref|YP_007183984.1| large subunit ribosomal protein L28 [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451811312|ref|YP_007447767.1| large subunit ribosomal protein L28 [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|429338035|gb|AFZ82458.1| large subunit ribosomal protein L28 [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|451776470|gb|AGF47469.1| large subunit ribosomal protein L28 [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 78
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + PN+Q +R + +R +R++V+T A+R IDK G
Sbjct: 7 ITGKGPMVGNNVSH-ANNKTKRRFLPNLQSRRFWLEEQNRWVRLRVSTKAIRTIDKYG 63
>gi|296136855|ref|YP_003644097.1| 50S ribosomal protein L28 [Thiomonas intermedia K12]
gi|410694599|ref|YP_003625221.1| 50S ribosomal protein L28 [Thiomonas sp. 3As]
gi|294341024|emb|CAZ89419.1| 50S ribosomal protein L28 [Thiomonas sp. 3As]
gi|295796977|gb|ADG31767.1| ribosomal protein L28 [Thiomonas intermedia K12]
Length = 77
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKT+R + PN+Q +R + +R +R++VT+ LR IDK GID
Sbjct: 8 TGKGPMVGNNVSH-ANNKTKRRFLPNLQYRRFWVESENRFVRLRVTSSGLRTIDKK-GID 65
Query: 110 EYL 112
L
Sbjct: 66 VVL 68
>gi|225717432|gb|ACO14562.1| 39S ribosomal protein L28, mitochondrial precursor [Caligus
clemensi]
Length = 295
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 70 RNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
R W P + L+S ++D++I + T L+ +D+A G D YLL TP +++
Sbjct: 122 RYWWPKLHLSVLYSRVLDKYIEMPATRRGLKLVDEAYGFDNYLLNTPVNEI 172
>gi|254796704|ref|YP_003081540.1| ribosomal protein L28 [Neorickettsia risticii str. Illinois]
gi|254589934|gb|ACT69296.1| ribosomal protein L28 [Neorickettsia risticii str. Illinois]
Length = 86
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 67 KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
KT++ + PN+Q +FS ++ + R KV+ +R +D GG+D++L T K+ ++ L
Sbjct: 8 KTKKRFMPNLQRITVFSDVLKQKFRFKVSAKTIRTVDFKGGLDDFLRNTKNSKL-SKSAL 66
Query: 127 YWKTKIEK 134
K +I K
Sbjct: 67 ALKKRIMK 74
>gi|20129239|ref|NP_608887.1| mitochondrial ribosomal protein L28, isoform A [Drosophila
melanogaster]
gi|442626028|ref|NP_001260063.1| mitochondrial ribosomal protein L28, isoform B [Drosophila
melanogaster]
gi|34925528|sp|Q9VMX0.1|RM28_DROME RecName: Full=39S ribosomal protein L28, mitochondrial;
Short=L28mt; Short=MRP-L28; Flags: Precursor
gi|7296915|gb|AAF52188.1| mitochondrial ribosomal protein L28, isoform A [Drosophila
melanogaster]
gi|157816666|gb|ABV82326.1| IP19992p [Drosophila melanogaster]
gi|440213348|gb|AGB92599.1| mitochondrial ribosomal protein L28, isoform B [Drosophila
melanogaster]
Length = 302
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
+P I + RG++ G+ + G + E + W PN++ + S+++D ++ V
Sbjct: 72 IPLPLIDTPESHRGIWGGEAVIKGFQKREQTKRRVPHFWVPNLRRSVVHSHVLDCYMSVV 131
Query: 94 VTTHALRCIDKAGGIDEYLLKT 115
VT L I + G D YLLK
Sbjct: 132 VTERTLEQIHECHGFDHYLLKN 153
>gi|350572490|ref|ZP_08940787.1| 50S ribosomal protein L28 [Neisseria wadsworthii 9715]
gi|349789927|gb|EGZ43856.1| 50S ribosomal protein L28 [Neisseria wadsworthii 9715]
Length = 71
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q +R + R +R++V+ ALR IDK GI
Sbjct: 1 MTGKRPMSGNNVSH-ANNKTKRRFLPNLQTRRFWVESEKRWVRLRVSNAALRTIDKV-GI 58
Query: 109 DEYL 112
D L
Sbjct: 59 DVVL 62
>gi|217969674|ref|YP_002354908.1| 50S ribosomal protein L28 [Thauera sp. MZ1T]
gi|217507001|gb|ACK54012.1| ribosomal protein L28 [Thauera sp. MZ1T]
Length = 78
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + PN+Q +R +S +R IR++V+ LR IDK G
Sbjct: 7 VTGKAPMVGNNVSH-ANNKTKRRFLPNLQSRRFWSEGENRWIRLRVSNAGLRTIDKKG 63
>gi|297537562|ref|YP_003673331.1| 50S ribosomal protein L28 [Methylotenera versatilis 301]
gi|297256909|gb|ADI28754.1| ribosomal protein L28 [Methylotenera versatilis 301]
Length = 78
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+ + GK GN VS N+T+R + PN+Q ++ + +R + +++T +ALR ID
Sbjct: 2 ARVCMVTGKKPMVGNNVSH-ANNRTKRRFLPNLQNRKFWVESENRWVSMRITNNALRTID 60
Query: 104 KAGGIDEYL 112
K GID L
Sbjct: 61 K-NGIDAVL 68
>gi|238021654|ref|ZP_04602080.1| hypothetical protein GCWU000324_01557 [Kingella oralis ATCC 51147]
gi|237866268|gb|EEP67310.1| hypothetical protein GCWU000324_01557 [Kingella oralis ATCC 51147]
Length = 66
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYL 112
GN VS NKT+R + PN+Q +R + +R IR++VT ALR IDK GID L
Sbjct: 3 GNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWIRIRVTNAALRTIDK-NGIDAVL 56
>gi|71066265|ref|YP_264992.1| 50S ribosomal protein L28 [Psychrobacter arcticus 273-4]
gi|93006813|ref|YP_581250.1| 50S ribosomal protein L28 [Psychrobacter cryohalolentis K5]
gi|122414948|sp|Q1Q987.1|RL28_PSYCK RecName: Full=50S ribosomal protein L28
gi|123648080|sp|Q4FR00.1|RL28_PSYA2 RecName: Full=50S ribosomal protein L28
gi|71039250|gb|AAZ19558.1| LSU ribosomal protein L28P [Psychrobacter arcticus 273-4]
gi|92394491|gb|ABE75766.1| LSU ribosomal protein L28P [Psychrobacter cryohalolentis K5]
Length = 78
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKTRR + PN+ R + +R +R++V+T +R IDK GID
Sbjct: 8 TGKRPMVGNNVSH-ANNKTRRRFLPNLHNHRFWVESENRFVRLRVSTKGMRIIDKL-GID 65
Query: 110 EYLL 113
+ L+
Sbjct: 66 KVLV 69
>gi|383849354|ref|XP_003700310.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Megachile
rotundata]
Length = 276
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 47 GLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GL+ G+ + G + R W P +++ ++S ++D ++ VT + I++
Sbjct: 83 GLWGGEAVIQGFTKKHRYARRHPRFWFPLLKKSVVYSEVLDEYMSTVVTYRTIHLINEHY 142
Query: 107 GIDEYLLKTPYHKMDTEMGLYWKTKI 132
G D YLLKTP + +E+ L K KI
Sbjct: 143 GFDHYLLKTPACDLKSELALKIKRKI 168
>gi|198427866|ref|XP_002126303.1| PREDICTED: similar to mitochondrial ribosomal protein L28 [Ciona
intestinalis]
Length = 285
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRN----WKPNVQEKRLFSYIMDRHIRVKVTTHAL 99
++ GL+ G+ I +G + + G K R WKP + + L+S I+D+ + VT L
Sbjct: 102 SREGLWGGEGIVWGFKYAR--GKKMSRKYYKVWKPQLFTRTLYSEILDKKFKTTVTGLTL 159
Query: 100 RCIDKAGGIDEYLLKT 115
ID+A G D ++L T
Sbjct: 160 DLIDEAYGFDFFILNT 175
>gi|187925123|ref|YP_001896765.1| 50S ribosomal protein L28 [Burkholderia phytofirmans PsJN]
gi|226738046|sp|B2T6H7.1|RL28_BURPP RecName: Full=50S ribosomal protein L28
gi|187716317|gb|ACD17541.1| ribosomal protein L28 [Burkholderia phytofirmans PsJN]
Length = 77
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R++ +R +R++++ LR IDK GID
Sbjct: 9 GKAPMSGNNVSH-ANNKTKRRFLPNLQSRRIWVESENRFVRLRISNAGLRLIDK-NGIDS 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|374705169|ref|ZP_09712039.1| 50S ribosomal protein L28 [Pseudomonas sp. S9]
Length = 78
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKTRR + PN+Q R + +R +R++V+ +RCIDK GID
Sbjct: 8 TGKGPVTGNNVSH-AHNKTRRRFLPNLQHHRFWVESENRFVRLRVSAKGMRCIDKR-GID 65
Query: 110 EYL 112
L
Sbjct: 66 VVL 68
>gi|91789646|ref|YP_550598.1| 50S ribosomal protein L28 [Polaromonas sp. JS666]
gi|123355325|sp|Q125U2.1|RL28_POLSJ RecName: Full=50S ribosomal protein L28
gi|91698871|gb|ABE45700.1| LSU ribosomal protein L28P [Polaromonas sp. JS666]
Length = 77
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKT+R + PN+Q +R + +R +R+++T+ LR IDK GID
Sbjct: 8 TGKGPMVGNNVSH-ANNKTKRRFMPNLQYRRFWVESENRWVRLRITSAGLRLIDKK-GID 65
Query: 110 EYLL 113
L+
Sbjct: 66 AILV 69
>gi|350273152|ref|YP_004884465.1| 50S ribosomal protein L28 [Rickettsia japonica YH]
gi|348592365|dbj|BAK96326.1| 50S ribosomal protein L28 [Rickettsia japonica YH]
Length = 97
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G + +GN VS KTRR ++PN++ + S I R+ V + ++KAGG
Sbjct: 7 LTGVGVLYGNNVSHSQ-RKTRRRFEPNLRSVKFTSDITAGEYRLSVNARCISSVEKAGGF 65
Query: 109 DEYLLK 114
D Y+LK
Sbjct: 66 DAYILK 71
>gi|163857625|ref|YP_001631923.1| 50S ribosomal protein L28 [Bordetella petrii DSM 12804]
gi|226738038|sp|A9HWU4.1|RL28_BORPD RecName: Full=50S ribosomal protein L28
gi|163261353|emb|CAP43655.1| 50S ribosomal protein L28 [Bordetella petrii]
Length = 78
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V+ A+R IDK GID
Sbjct: 9 GKGPMTGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSAKAIRIIDK-NGIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|399117142|emb|CCG19956.1| 50S ribosomal protein L28 [Taylorella asinigenitalis 14/45]
Length = 78
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK GN VS NKT+R + PN+Q R + +R +R++++++ALR ID
Sbjct: 2 AKVCQVTGKRPMSGNNVSH-AHNKTKRRFLPNLQTHRFWVESENRWVRLRISSNALRTID 60
Query: 104 KAGGIDEYL 112
K GID L
Sbjct: 61 KK-GIDAVL 68
>gi|402850593|ref|ZP_10898788.1| LSU ribosomal protein L28p [Rhodovulum sp. PH10]
gi|402499198|gb|EJW10915.1| LSU ribosomal protein L28p [Rhodovulum sp. PH10]
Length = 99
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK G+ VS KT+R + PN+ L S + R +R+++ +AL+ +D
Sbjct: 2 SRRCELTGKGALVGHTVSHSN-IKTKRRFLPNLVNVTLQSDALGRGVRLRICANALKSVD 60
Query: 104 KAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKL 135
GG+D +L+K + L K ++KL
Sbjct: 61 HRGGLDAFLMKAGDADLSPRALLLKKQIVKKL 92
>gi|341583362|ref|YP_004763853.1| 50S ribosomal protein L28 [Rickettsia heilongjiangensis 054]
gi|340807588|gb|AEK74176.1| 50S ribosomal protein L28 [Rickettsia heilongjiangensis 054]
Length = 97
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G + +GN VS KTRR ++PN++ + S I R+ V + ++KAGG
Sbjct: 7 LTGVGVLYGNNVSHSQ-RKTRRRFEPNLRSVKFTSDITAGEYRLSVNARCISSVEKAGGF 65
Query: 109 DEYLLK 114
D Y+LK
Sbjct: 66 DAYILK 71
>gi|157828010|ref|YP_001494252.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165932708|ref|YP_001649497.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. Iowa]
gi|378720810|ref|YP_005285697.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. Colombia]
gi|378722164|ref|YP_005287050.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. Arizona]
gi|378723522|ref|YP_005288406.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. Hauke]
gi|379016928|ref|YP_005293163.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. Brazil]
gi|379017310|ref|YP_005293544.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. Hino]
gi|166226614|sp|A8GQR9.1|RL28_RICRS RecName: Full=50S ribosomal protein L28
gi|189029452|sp|B0BW65.1|RL28_RICRO RecName: Full=50S ribosomal protein L28
gi|157800491|gb|ABV75744.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165907795|gb|ABY72091.1| LSU ribosomal protein L28P [Rickettsia rickettsii str. Iowa]
gi|376325452|gb|AFB22692.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. Brazil]
gi|376325834|gb|AFB23073.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. Colombia]
gi|376327188|gb|AFB24426.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. Arizona]
gi|376329875|gb|AFB27111.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. Hino]
gi|376332537|gb|AFB29770.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. Hauke]
Length = 97
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G + +GN VS KTRR ++PN++ + S I R+ V + ++KAGG
Sbjct: 7 LTGVGVLYGNNVSHSQ-RKTRRRFEPNLRSVKFTSDITAGEYRLSVNARCISSVEKAGGF 65
Query: 109 DEYLLK 114
D Y+LK
Sbjct: 66 DAYILK 71
>gi|15892059|ref|NP_359773.1| 50S ribosomal protein L28 [Rickettsia conorii str. Malish 7]
gi|34580910|ref|ZP_00142390.1| 50S ribosomal protein L28 [Rickettsia sibirica 246]
gi|157964165|ref|YP_001498989.1| 50S ribosomal protein L28 [Rickettsia massiliae MTU5]
gi|229586339|ref|YP_002844840.1| 50S ribosomal protein L28 [Rickettsia africae ESF-5]
gi|239947148|ref|ZP_04698901.1| 50S ribosomal protein L28 [Rickettsia endosymbiont of Ixodes
scapularis]
gi|374318879|ref|YP_005065377.1| 50S ribosomal protein L28 [Rickettsia slovaca 13-B]
gi|379018642|ref|YP_005294876.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. Hlp#2]
gi|379711878|ref|YP_005300217.1| 50S ribosomal protein L28 [Rickettsia philipii str. 364D]
gi|383481077|ref|YP_005389992.1| 50S ribosomal protein L28 [Rickettsia rhipicephali str.
3-7-female6-CWPP]
gi|383482945|ref|YP_005391859.1| 50S ribosomal protein L28 [Rickettsia montanensis str. OSU 85-930]
gi|383483478|ref|YP_005392391.1| 50S ribosomal protein L28 [Rickettsia parkeri str. Portsmouth]
gi|383750776|ref|YP_005425877.1| 50S ribosomal protein L28 [Rickettsia slovaca str. D-CWPP]
gi|20139556|sp|Q92JD1.1|RL28_RICCN RecName: Full=50S ribosomal protein L28
gi|166987915|sp|A8F0K6.1|RL28_RICM5 RecName: Full=50S ribosomal protein L28
gi|259646748|sp|C3PMD7.1|RL28_RICAE RecName: Full=50S ribosomal protein L28
gi|15619179|gb|AAL02674.1| 50S ribosomal protein L28 [Rickettsia conorii str. Malish 7]
gi|28262295|gb|EAA25799.1| 50S ribosomal protein L28 [Rickettsia sibirica 246]
gi|157843941|gb|ABV84442.1| 50S ribosomal protein L28 [Rickettsia massiliae MTU5]
gi|228021389|gb|ACP53097.1| 50S ribosomal protein L28 [Rickettsia africae ESF-5]
gi|239921424|gb|EER21448.1| 50S ribosomal protein L28 [Rickettsia endosymbiont of Ixodes
scapularis]
gi|360041427|gb|AEV91809.1| 50S ribosomal protein L28 [Rickettsia slovaca 13-B]
gi|376328523|gb|AFB25760.1| 50S ribosomal protein L28 [Rickettsia philipii str. 364D]
gi|376331222|gb|AFB28456.1| 50S ribosomal protein L28 [Rickettsia rickettsii str. Hlp#2]
gi|378933416|gb|AFC71919.1| 50S ribosomal protein L28 [Rickettsia rhipicephali str.
3-7-female6-CWPP]
gi|378935299|gb|AFC73800.1| 50S ribosomal protein L28 [Rickettsia montanensis str. OSU 85-930]
gi|378935832|gb|AFC74332.1| 50S ribosomal protein L28 [Rickettsia parkeri str. Portsmouth]
gi|379773790|gb|AFD19146.1| 50S ribosomal protein L28 [Rickettsia slovaca str. D-CWPP]
Length = 97
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G + +GN VS KTRR ++PN++ + S I R+ V + ++KAGG
Sbjct: 7 LTGVGVLYGNNVSHSQ-RKTRRRFEPNLRSVKFTSDITAGEYRLSVNARCISSVEKAGGF 65
Query: 109 DEYLLK 114
D Y+LK
Sbjct: 66 DAYILK 71
>gi|332526019|ref|ZP_08402157.1| 50S ribosomal protein L28 [Rubrivivax benzoatilyticus JA2]
gi|383759269|ref|YP_005438254.1| 50S ribosomal protein L28 RpmB [Rubrivivax gelatinosus IL144]
gi|332109862|gb|EGJ10490.1| 50S ribosomal protein L28 [Rubrivivax benzoatilyticus JA2]
gi|381379938|dbj|BAL96755.1| 50S ribosomal protein L28 RpmB [Rubrivivax gelatinosus IL144]
Length = 77
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + PN+Q +R + +R +R++V+ ALR IDK G
Sbjct: 8 TGKRPMVGNNVSH-ANNKTKRRFLPNLQYRRFWMESENRWVRLRVSNAALRLIDKVG 63
>gi|91784963|ref|YP_560169.1| 50S ribosomal protein L28 [Burkholderia xenovorans LB400]
gi|209517443|ref|ZP_03266284.1| ribosomal protein L28 [Burkholderia sp. H160]
gi|385208294|ref|ZP_10035162.1| ribosomal protein L28 [Burkholderia sp. Ch1-1]
gi|123358513|sp|Q13UX2.1|RL28_BURXL RecName: Full=50S ribosomal protein L28
gi|91688917|gb|ABE32117.1| LSU ribosomal protein L28P [Burkholderia xenovorans LB400]
gi|209502097|gb|EEA02112.1| ribosomal protein L28 [Burkholderia sp. H160]
gi|385180632|gb|EIF29908.1| ribosomal protein L28 [Burkholderia sp. Ch1-1]
Length = 77
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q +R++ +R +R++V+ LR IDK GI
Sbjct: 7 VTGKAPMSGNNVSH-ANNKTKRRFLPNLQNRRIWVESENRWVRLRVSNAGLRLIDK-NGI 64
Query: 109 DEYL 112
D L
Sbjct: 65 DAVL 68
>gi|408671777|ref|YP_006871525.1| 50S ribosomal protein L28 [Emticicia oligotrophica DSM 17448]
gi|387853401|gb|AFK01498.1| 50S ribosomal protein L28 [Emticicia oligotrophica DSM 17448]
Length = 79
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK Q GN VS NKT+R + PN++ KR F + +KV+T ALR I+
Sbjct: 2 AKVCQITGKKTQVGNNVSH-ANNKTKRKFFPNLKTKRFFLESEGIWVSLKVSTSALRTIN 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|400288844|ref|ZP_10790876.1| 50S ribosomal protein L28 [Psychrobacter sp. PAMC 21119]
Length = 78
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKTRR + PN+ R + +R +R++V+T +R IDK GID
Sbjct: 8 TGKRPMVGNNVSH-ANNKTRRRFLPNLHNHRFWVESENRFVRLRVSTKGMRTIDKL-GID 65
Query: 110 EYL 112
+ L
Sbjct: 66 KVL 68
>gi|402704077|ref|ZP_10852056.1| 50S ribosomal protein L28 [Rickettsia helvetica C9P9]
Length = 97
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G + +GN VS KTRR ++PN++ + S I R+ V + ++KAGG
Sbjct: 7 LTGVGVLYGNNVSHSQ-RKTRRRFEPNLRSVKFTSDITAGEYRLSVNARCISSVEKAGGF 65
Query: 109 DEYLLK 114
D Y+LK
Sbjct: 66 DAYILK 71
>gi|67458475|ref|YP_246099.1| 50S ribosomal protein L28 [Rickettsia felis URRWXCal2]
gi|75537055|sp|Q4UNC4.1|RL28_RICFE RecName: Full=50S ribosomal protein L28
gi|67004008|gb|AAY60934.1| 50S ribosomal protein L28 [Rickettsia felis URRWXCal2]
Length = 97
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G + +GN VS KTRR ++PN++ + S I R+ V + ++KAGG
Sbjct: 7 LTGVGVLYGNNVSHSQ-RKTRRRFEPNLRSVKFTSDITAGEYRLSVNARCISSVEKAGGF 65
Query: 109 DEYLLK 114
D Y+LK
Sbjct: 66 DAYILK 71
>gi|290561272|gb|ADD38038.1| 39S ribosomal protein L28, mitochondrial [Lepeophtheirus salmonis]
Length = 295
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 72 WKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKM 120
W P + ++S ++D++I + VT L+ +D A G D YLL+TP +++
Sbjct: 124 WWPKLHLAVVYSRVLDKYIEMPVTRRGLKLVDMAHGFDNYLLRTPVNEI 172
>gi|395763681|ref|ZP_10444350.1| 50S ribosomal protein L28 [Janthinobacterium lividum PAMC 25724]
Length = 78
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q +R+F +R + ++++ LR IDK GI
Sbjct: 7 VTGKKPMVGNNVSH-ANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKV-GI 64
Query: 109 DEYLL 113
D L+
Sbjct: 65 DAVLV 69
>gi|195576654|ref|XP_002078190.1| GD23314 [Drosophila simulans]
gi|194190199|gb|EDX03775.1| GD23314 [Drosophila simulans]
Length = 302
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
+P I + RG++ G+ + G + + + W PN++ + S+++D ++ V
Sbjct: 72 IPLPLIDTPESHRGIWGGEAVIKGFQKRQQTKRRVPHFWVPNLRRSVVHSHVLDSYMSVV 131
Query: 94 VTTHALRCIDKAGGIDEYLLKT 115
VT L I + G D YLLK
Sbjct: 132 VTERTLEQIHECHGFDHYLLKN 153
>gi|304310174|ref|YP_003809772.1| 50S ribosomal protein L28 [gamma proteobacterium HdN1]
gi|301795907|emb|CBL44108.1| 50S ribosomal protein L28 [gamma proteobacterium HdN1]
Length = 78
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK GN VS KTRR ++PN+ R++ R +R++V+ H LR ID
Sbjct: 2 AKVCQVTGKRPITGNNVSH-ANRKTRRRFEPNLHHHRIWVESEKRFVRLRVSNHGLRIID 60
Query: 104 KAGGIDEYL 112
K GID+ L
Sbjct: 61 KV-GIDQVL 68
>gi|156084812|ref|XP_001609889.1| hypothetical protein [Babesia bovis T2Bo]
gi|154797141|gb|EDO06321.1| conserved hypothetical protein [Babesia bovis]
Length = 292
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHI-RVKVTT 96
R+ ++ GL+ + + ++V+ +TR +PNV +K + S +++ + V+VTT
Sbjct: 39 RVPSAASQTGLYHDEDFNYYSKVAF-SLKRTRVKLRPNVVKKDIESELLNSTLTNVRVTT 97
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
A+ + AGG D Y+L TP ++ +++G
Sbjct: 98 SAIHAMTSAGGFDNYILNTPPEQLRSQLG 126
>gi|383312086|ref|YP_005364887.1| 50S ribosomal protein L28 [Candidatus Rickettsia amblyommii str.
GAT-30V]
gi|378930746|gb|AFC69255.1| 50S ribosomal protein L28 [Candidatus Rickettsia amblyommii str.
GAT-30V]
Length = 97
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G + +GN VS KTRR ++PN++ + S I R+ V + ++KAGG
Sbjct: 7 LTGVGVLYGNNVSHSQ-RKTRRRFEPNLRSVKFTSDITAGKYRLSVNARCISSVEKAGGF 65
Query: 109 DEYLLK 114
D Y+LK
Sbjct: 66 DAYILK 71
>gi|325285397|ref|YP_004261187.1| 50S ribosomal protein L28 [Cellulophaga lytica DSM 7489]
gi|324320851|gb|ADY28316.1| 50S ribosomal protein L28 [Cellulophaga lytica DSM 7489]
Length = 78
Score = 44.3 bits (103), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK FGN VS NKTRR + N+ +KR + DR I +KV+T AL+ I+K GI
Sbjct: 7 ITGKKAMFGNNVS-FSINKTRRRFDVNLSKKRFYIPEEDRWITLKVSTRALKSINKK-GI 64
Query: 109 DEYL 112
E L
Sbjct: 65 SEVL 68
>gi|195472823|ref|XP_002088698.1| GE11277 [Drosophila yakuba]
gi|194174799|gb|EDW88410.1| GE11277 [Drosophila yakuba]
Length = 301
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
+P I + RG++ G+ + G + + + W PN++ + S+++D ++ V
Sbjct: 72 IPLPLIDTPESHRGIWGGEAVIKGFQKRQQTKRRVPHFWVPNLRRSVVHSHVLDSYMSVV 131
Query: 94 VTTHALRCIDKAGGIDEYLLKT 115
VT L I + G D YLLK
Sbjct: 132 VTERTLEQIHECHGFDHYLLKN 153
>gi|429329314|gb|AFZ81073.1| hypothetical protein BEWA_004810 [Babesia equi]
Length = 281
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHI-RVKVTT 96
R+ ++ GL+ + + +V+ KTR KPNV +K S++++ + V+VTT
Sbjct: 39 RVPSASSQTGLYHDEDYNYYTKVAY-SLQKTRIKLKPNVFKKDFESHMLNTTVPNVRVTT 97
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
AL I + GG D Y+L T ++ +++G
Sbjct: 98 SALHAITEEGGFDNYILNTTPEQLRSQLG 126
>gi|195342602|ref|XP_002037889.1| GM18510 [Drosophila sechellia]
gi|194132739|gb|EDW54307.1| GM18510 [Drosophila sechellia]
Length = 302
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
+P I + RG++ G+ + G + + + W PN++ + S+++D ++ V
Sbjct: 72 IPLPLIDTPESHRGIWGGEAVIKGFQKRQQTKRRVPHFWVPNLRRSVVHSHVLDSYMSVV 131
Query: 94 VTTHALRCIDKAGGIDEYLLKT 115
VT L I + G D YLLK
Sbjct: 132 VTERTLEQIHECHGFDHYLLKN 153
>gi|219685441|ref|ZP_03540259.1| ribosomal protein L28 [Borrelia garinii Far04]
gi|219672997|gb|EED30018.1| ribosomal protein L28 [Borrelia garinii Far04]
Length = 92
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 13/81 (16%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG------------GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
A++ GK FGN V G G KT+R +K N+ K+ F + R I+
Sbjct: 2 ARKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPDLGRSIK 61
Query: 92 VKVTTHALRCIDKAGGIDEYL 112
+KV+ +ALR I K G+D +L
Sbjct: 62 IKVSANALRSISKI-GLDAFL 81
>gi|451812041|ref|YP_007448495.1| large subunit ribosomal protein L28 [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451777943|gb|AGF48891.1| large subunit ribosomal protein L28 [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 71
Score = 44.3 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + PN+Q +R + ++ IR+KV+T A+R IDK G
Sbjct: 9 GKAPMVGNNVSH-ANNKTKRRFLPNLQSRRFWIEEENKWIRLKVSTKAIRTIDKNG 63
>gi|438000246|ref|YP_007183979.1| large subunit ribosomal protein L28 [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451812768|ref|YP_007449221.1| large subunit ribosomal protein L28 [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|429339480|gb|AFZ83902.1| large subunit ribosomal protein L28 [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|451778737|gb|AGF49617.1| large subunit ribosomal protein L28 [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 71
Score = 44.3 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + PN+Q +R + ++ IR+KV+T A+R IDK G
Sbjct: 9 GKAPMVGNNVSH-ANNKTKRRFLPNLQSRRFWIEEENKWIRLKVSTKAIRTIDKNG 63
>gi|332284893|ref|YP_004416804.1| 50S ribosomal protein L28 [Pusillimonas sp. T7-7]
gi|330428846|gb|AEC20180.1| 50S ribosomal protein L28 [Pusillimonas sp. T7-7]
Length = 66
Score = 44.3 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYL 112
GN VS NKT+R + PN+Q +R + +R +R++V+T ALR IDK GID L
Sbjct: 3 GNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSTSALRTIDK-NGIDSVL 56
>gi|170693581|ref|ZP_02884739.1| ribosomal protein L28 [Burkholderia graminis C4D1M]
gi|295677433|ref|YP_003605957.1| 50S ribosomal protein L28 [Burkholderia sp. CCGE1002]
gi|307730753|ref|YP_003907977.1| 50S ribosomal protein L28 [Burkholderia sp. CCGE1003]
gi|323527116|ref|YP_004229269.1| 50S ribosomal protein L28 [Burkholderia sp. CCGE1001]
gi|407714522|ref|YP_006835087.1| 50S ribosomal protein L28 [Burkholderia phenoliruptrix BR3459a]
gi|170141363|gb|EDT09533.1| ribosomal protein L28 [Burkholderia graminis C4D1M]
gi|295437276|gb|ADG16446.1| ribosomal protein L28 [Burkholderia sp. CCGE1002]
gi|307585288|gb|ADN58686.1| ribosomal protein L28 [Burkholderia sp. CCGE1003]
gi|323384118|gb|ADX56209.1| ribosomal protein L28 [Burkholderia sp. CCGE1001]
gi|407236706|gb|AFT86905.1| large subunit ribosomal protein L28 [Burkholderia phenoliruptrix
BR3459a]
Length = 77
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q +R++ +R +R++++ LR IDK GI
Sbjct: 7 VTGKAPMSGNNVSH-ANNKTKRRFLPNLQSRRIWVESENRWVRLRISNAGLRLIDK-NGI 64
Query: 109 DEYL 112
D L
Sbjct: 65 DAVL 68
>gi|333368074|ref|ZP_08460294.1| 50S ribosomal protein L28 [Psychrobacter sp. 1501(2011)]
gi|332977907|gb|EGK14655.1| 50S ribosomal protein L28 [Psychrobacter sp. 1501(2011)]
Length = 78
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK Q GN VS N+TRR + PN+ R + +R +R++V+T +R IDK GID
Sbjct: 8 TGKRPQVGNNVSH-ALNRTRRRFLPNLHNHRFWVESENRFVRLRVSTKGMRIIDKH-GID 65
Query: 110 EYL 112
+ L
Sbjct: 66 KVL 68
>gi|374366113|ref|ZP_09624196.1| 50S ribosomal protein L28 [Cupriavidus basilensis OR16]
gi|373102238|gb|EHP43276.1| 50S ribosomal protein L28 [Cupriavidus basilensis OR16]
Length = 77
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKT+R + PN+Q +R F +R + ++V+ LR IDK GID
Sbjct: 8 TGKAPMVGNNVSH-ANNKTKRRFLPNLQNRRFFVESENRWVSLRVSNAGLRLIDKK-GID 65
Query: 110 EYLL 113
L+
Sbjct: 66 TVLV 69
>gi|53718557|ref|YP_107543.1| 50S ribosomal protein L28 [Burkholderia pseudomallei K96243]
gi|53726240|ref|YP_103795.1| 50S ribosomal protein L28 [Burkholderia mallei ATCC 23344]
gi|76810126|ref|YP_332549.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1710b]
gi|78067303|ref|YP_370072.1| 50S ribosomal protein L28 [Burkholderia sp. 383]
gi|83720970|ref|YP_441336.1| 50S ribosomal protein L28 [Burkholderia thailandensis E264]
gi|107023440|ref|YP_621767.1| 50S ribosomal protein L28 [Burkholderia cenocepacia AU 1054]
gi|115352600|ref|YP_774439.1| 50S ribosomal protein L28 [Burkholderia ambifaria AMMD]
gi|116690522|ref|YP_836145.1| 50S ribosomal protein L28 [Burkholderia cenocepacia HI2424]
gi|124384182|ref|YP_001027008.1| 50S ribosomal protein L28 [Burkholderia mallei NCTC 10229]
gi|126440334|ref|YP_001058029.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 668]
gi|126452424|ref|YP_001065264.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1106a]
gi|134296675|ref|YP_001120410.1| 50S ribosomal protein L28 [Burkholderia vietnamiensis G4]
gi|161523973|ref|YP_001578985.1| 50S ribosomal protein L28 [Burkholderia multivorans ATCC 17616]
gi|167561867|ref|ZP_02354783.1| 50S ribosomal protein L28 [Burkholderia oklahomensis EO147]
gi|167569089|ref|ZP_02361963.1| 50S ribosomal protein L28 [Burkholderia oklahomensis C6786]
gi|167580121|ref|ZP_02372995.1| 50S ribosomal protein L28 [Burkholderia thailandensis TXDOH]
gi|167585718|ref|ZP_02378106.1| 50S ribosomal protein L28 [Burkholderia ubonensis Bu]
gi|167618185|ref|ZP_02386816.1| 50S ribosomal protein L28 [Burkholderia thailandensis Bt4]
gi|167718468|ref|ZP_02401704.1| 50S ribosomal protein L28 [Burkholderia pseudomallei DM98]
gi|167737517|ref|ZP_02410291.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 14]
gi|167814636|ref|ZP_02446316.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 91]
gi|167823104|ref|ZP_02454575.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 9]
gi|167835744|ref|ZP_02462627.1| 50S ribosomal protein L28 [Burkholderia thailandensis MSMB43]
gi|167844667|ref|ZP_02470175.1| 50S ribosomal protein L28 [Burkholderia pseudomallei B7210]
gi|167893196|ref|ZP_02480598.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 7894]
gi|167901649|ref|ZP_02488854.1| 50S ribosomal protein L28 [Burkholderia pseudomallei NCTC 13177]
gi|167909899|ref|ZP_02496990.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 112]
gi|167917921|ref|ZP_02505012.1| 50S ribosomal protein L28 [Burkholderia pseudomallei BCC215]
gi|170697689|ref|ZP_02888777.1| ribosomal protein L28 [Burkholderia ambifaria IOP40-10]
gi|170733863|ref|YP_001765810.1| 50S ribosomal protein L28 [Burkholderia cenocepacia MC0-3]
gi|171316764|ref|ZP_02905976.1| ribosomal protein L28 [Burkholderia ambifaria MEX-5]
gi|172061462|ref|YP_001809114.1| 50S ribosomal protein L28 [Burkholderia ambifaria MC40-6]
gi|186475351|ref|YP_001856821.1| 50S ribosomal protein L28 [Burkholderia phymatum STM815]
gi|189351266|ref|YP_001946894.1| 50S ribosomal protein L28 [Burkholderia multivorans ATCC 17616]
gi|206561052|ref|YP_002231817.1| 50S ribosomal protein L28 [Burkholderia cenocepacia J2315]
gi|221199268|ref|ZP_03572312.1| 50S ribosomal protein L28 [Burkholderia multivorans CGD2M]
gi|221205830|ref|ZP_03578845.1| 50S ribosomal protein L28 [Burkholderia multivorans CGD2]
gi|221211488|ref|ZP_03584467.1| 50S ribosomal protein L28 [Burkholderia multivorans CGD1]
gi|238028404|ref|YP_002912635.1| 50S ribosomal protein L28 [Burkholderia glumae BGR1]
gi|254175666|ref|ZP_04882326.1| 50S ribosomal protein L28 [Burkholderia mallei ATCC 10399]
gi|254181485|ref|ZP_04888082.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1655]
gi|254190873|ref|ZP_04897380.1| 50S ribosomal protein L28 [Burkholderia pseudomallei Pasteur 52237]
gi|254202497|ref|ZP_04908860.1| 50S ribosomal protein L28 [Burkholderia mallei FMH]
gi|254207832|ref|ZP_04914182.1| 50S ribosomal protein L28 [Burkholderia mallei JHU]
gi|254247436|ref|ZP_04940757.1| ribosomal protein L28 [Burkholderia cenocepacia PC184]
gi|254251633|ref|ZP_04944951.1| RL28_BLOFL 50S ribosomal protein L28 [Burkholderia dolosa AUO158]
gi|254356273|ref|ZP_04972549.1| 50S ribosomal protein L28 [Burkholderia mallei 2002721280]
gi|257139990|ref|ZP_05588252.1| ribosomal protein L28 [Burkholderia thailandensis E264]
gi|330818062|ref|YP_004361767.1| 50S ribosomal protein L28 [Burkholderia gladioli BSR3]
gi|402565725|ref|YP_006615070.1| 50S ribosomal protein L28 [Burkholderia cepacia GG4]
gi|416907101|ref|ZP_11931012.1| ribosomal protein L28 [Burkholderia sp. TJI49]
gi|421472309|ref|ZP_15920517.1| ribosomal protein L28 [Burkholderia multivorans ATCC BAA-247]
gi|421479135|ref|ZP_15926852.1| ribosomal protein L28 [Burkholderia multivorans CF2]
gi|444363348|ref|ZP_21163779.1| ribosomal protein L28 [Burkholderia cenocepacia BC7]
gi|444367076|ref|ZP_21167070.1| ribosomal protein L28 [Burkholderia cenocepacia K56-2Valvano]
gi|67461359|sp|Q62HM5.1|RL28_BURMA RecName: Full=50S ribosomal protein L28
gi|67461365|sp|Q63WH3.1|RL28_BURPS RecName: Full=50S ribosomal protein L28
gi|122322428|sp|Q0BCL8.1|RL28_BURCM RecName: Full=50S ribosomal protein L28
gi|123371366|sp|Q1BUB1.1|RL28_BURCA RecName: Full=50S ribosomal protein L28
gi|123537847|sp|Q2T0G3.1|RL28_BURTA RecName: Full=50S ribosomal protein L28
gi|123567820|sp|Q39DN8.1|RL28_BURS3 RecName: Full=50S ribosomal protein L28
gi|123599996|sp|Q3JV54.1|RL28_BURP1 RecName: Full=50S ribosomal protein L28
gi|166226550|sp|A0K9S5.1|RL28_BURCH RecName: Full=50S ribosomal protein L28
gi|166226551|sp|A2S4Y9.1|RL28_BURM9 RecName: Full=50S ribosomal protein L28
gi|166226552|sp|A3NSE3.1|RL28_BURP0 RecName: Full=50S ribosomal protein L28
gi|166226553|sp|A3N6Q8.1|RL28_BURP6 RecName: Full=50S ribosomal protein L28
gi|166226554|sp|A4JH22.1|RL28_BURVG RecName: Full=50S ribosomal protein L28
gi|226738041|sp|B1YV94.1|RL28_BURA4 RecName: Full=50S ribosomal protein L28
gi|226738042|sp|B1JXB3.1|RL28_BURCC RecName: Full=50S ribosomal protein L28
gi|226738043|sp|B4E8Y7.1|RL28_BURCJ RecName: Full=50S ribosomal protein L28
gi|226738044|sp|A9AHD5.1|RL28_BURM1 RecName: Full=50S ribosomal protein L28
gi|226738045|sp|B2JDZ9.1|RL28_BURP8 RecName: Full=50S ribosomal protein L28
gi|52208971|emb|CAH34910.1| 50S ribosomal protein L28 [Burkholderia pseudomallei K96243]
gi|52429663|gb|AAU50256.1| ribosomal protein L28 [Burkholderia mallei ATCC 23344]
gi|76579579|gb|ABA49054.1| RpmB protein [Burkholderia pseudomallei 1710b]
gi|77968048|gb|ABB09428.1| LSU ribosomal protein L28P [Burkholderia sp. 383]
gi|83654795|gb|ABC38858.1| ribosomal protein L28, putative [Burkholderia thailandensis E264]
gi|105893629|gb|ABF76794.1| LSU ribosomal protein L28P [Burkholderia cenocepacia AU 1054]
gi|115282588|gb|ABI88105.1| LSU ribosomal protein L28P [Burkholderia ambifaria AMMD]
gi|116648611|gb|ABK09252.1| LSU ribosomal protein L28P [Burkholderia cenocepacia HI2424]
gi|124292202|gb|ABN01471.1| 50S ribosomal protein L28 [Burkholderia mallei NCTC 10229]
gi|124872212|gb|EAY63928.1| ribosomal protein L28 [Burkholderia cenocepacia PC184]
gi|124894242|gb|EAY68122.1| RL28_BLOFL 50S ribosomal protein L28 [Burkholderia dolosa AUO158]
gi|126219827|gb|ABN83333.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 668]
gi|126226066|gb|ABN89606.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1106a]
gi|134139832|gb|ABO55575.1| LSU ribosomal protein L28P [Burkholderia vietnamiensis G4]
gi|147746744|gb|EDK53821.1| 50S ribosomal protein L28 [Burkholderia mallei FMH]
gi|147751726|gb|EDK58793.1| 50S ribosomal protein L28 [Burkholderia mallei JHU]
gi|148025270|gb|EDK83424.1| 50S ribosomal protein L28 [Burkholderia mallei 2002721280]
gi|157938548|gb|EDO94218.1| 50S ribosomal protein L28 [Burkholderia pseudomallei Pasteur 52237]
gi|160341402|gb|ABX14488.1| ribosomal protein L28 [Burkholderia multivorans ATCC 17616]
gi|160696710|gb|EDP86680.1| 50S ribosomal protein L28 [Burkholderia mallei ATCC 10399]
gi|169817105|gb|ACA91688.1| ribosomal protein L28 [Burkholderia cenocepacia MC0-3]
gi|170137437|gb|EDT05677.1| ribosomal protein L28 [Burkholderia ambifaria IOP40-10]
gi|171098114|gb|EDT42929.1| ribosomal protein L28 [Burkholderia ambifaria MEX-5]
gi|171993979|gb|ACB64898.1| ribosomal protein L28 [Burkholderia ambifaria MC40-6]
gi|184191810|gb|ACC69775.1| ribosomal protein L28 [Burkholderia phymatum STM815]
gi|184212023|gb|EDU09066.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 1655]
gi|189335288|dbj|BAG44358.1| large subunit ribosomal protein L28 [Burkholderia multivorans ATCC
17616]
gi|198037094|emb|CAR53015.1| 50S ribosomal protein L28 [Burkholderia cenocepacia J2315]
gi|221168849|gb|EEE01317.1| 50S ribosomal protein L28 [Burkholderia multivorans CGD1]
gi|221174668|gb|EEE07100.1| 50S ribosomal protein L28 [Burkholderia multivorans CGD2]
gi|221180553|gb|EEE12956.1| 50S ribosomal protein L28 [Burkholderia multivorans CGD2M]
gi|237877598|gb|ACR29931.1| 50S ribosomal protein L28 [Burkholderia glumae BGR1]
gi|325528991|gb|EGD06010.1| ribosomal protein L28 [Burkholderia sp. TJI49]
gi|327370455|gb|AEA61811.1| 50S ribosomal protein L28 [Burkholderia gladioli BSR3]
gi|400223379|gb|EJO53688.1| ribosomal protein L28 [Burkholderia multivorans ATCC BAA-247]
gi|400223539|gb|EJO53831.1| ribosomal protein L28 [Burkholderia multivorans CF2]
gi|402246922|gb|AFQ47376.1| 50S ribosomal protein L28 [Burkholderia cepacia GG4]
gi|443595111|gb|ELT63716.1| ribosomal protein L28 [Burkholderia cenocepacia BC7]
gi|443603509|gb|ELT71508.1| ribosomal protein L28 [Burkholderia cenocepacia K56-2Valvano]
Length = 77
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V+ LR IDK GID
Sbjct: 9 GKAPMSGNNVSH-ANNKTKRRFLPNLQNRRFWVESENRWVRLRVSNAGLRLIDK-NGIDS 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|427400966|ref|ZP_18892204.1| 50S ribosomal protein L28 [Massilia timonae CCUG 45783]
gi|425719862|gb|EKU82789.1| 50S ribosomal protein L28 [Massilia timonae CCUG 45783]
Length = 78
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK + GN VS NKT+R + PN+Q +R++ +R + ++++ LR IDK GI
Sbjct: 7 VTGKGVMVGNNVSH-ANNKTKRRFLPNLQNRRIYVESENRWVSLRLSNAGLRVIDKL-GI 64
Query: 109 DEYL 112
D L
Sbjct: 65 DAVL 68
>gi|152983116|ref|YP_001354242.1| 50S ribosomal protein L28 [Janthinobacterium sp. Marseille]
gi|151283193|gb|ABR91603.1| 50S ribosomal protein L28 [Janthinobacterium sp. Marseille]
Length = 112
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 42 NRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRC 101
N A+ GK GN VS NKT+R + PN+Q +R+F +R + ++++ LR
Sbjct: 34 NMARVCQVTGKGPMVGNNVSH-ANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRV 92
Query: 102 IDKAGGIDEYL 112
IDK GID L
Sbjct: 93 IDKI-GIDAVL 102
>gi|187929783|ref|YP_001900270.1| 50S ribosomal protein L28 [Ralstonia pickettii 12J]
gi|241663909|ref|YP_002982269.1| 50S ribosomal protein L28 [Ralstonia pickettii 12D]
gi|309781501|ref|ZP_07676237.1| ribosomal protein L28 [Ralstonia sp. 5_7_47FAA]
gi|404396838|ref|ZP_10988632.1| 50S ribosomal protein L28 [Ralstonia sp. 5_2_56FAA]
gi|226699151|sp|B2UAP1.1|RL28_RALPJ RecName: Full=50S ribosomal protein L28
gi|187726673|gb|ACD27838.1| ribosomal protein L28 [Ralstonia pickettii 12J]
gi|240865936|gb|ACS63597.1| ribosomal protein L28 [Ralstonia pickettii 12D]
gi|308919914|gb|EFP65575.1| ribosomal protein L28 [Ralstonia sp. 5_7_47FAA]
gi|348616897|gb|EGY66389.1| 50S ribosomal protein L28 [Ralstonia sp. 5_2_56FAA]
Length = 77
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q +R + +R + ++V+ LR IDK GI
Sbjct: 7 VTGKAPMVGNNVSH-ANNKTKRRFLPNLQNRRFWVESENRWVSLRVSNAGLRLIDKK-GI 64
Query: 109 DEYLL 113
DE L+
Sbjct: 65 DEVLV 69
>gi|445498859|ref|ZP_21465714.1| 50S ribosomal protein L28 [Janthinobacterium sp. HH01]
gi|444788854|gb|ELX10402.1| 50S ribosomal protein L28 [Janthinobacterium sp. HH01]
Length = 78
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q +R+F +R + ++++ LR IDK GI
Sbjct: 7 VTGKKPMVGNNVSH-ANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKV-GI 64
Query: 109 DEYL 112
D L
Sbjct: 65 DAVL 68
>gi|73542418|ref|YP_296938.1| 50S ribosomal protein L28 [Ralstonia eutropha JMP134]
gi|113868988|ref|YP_727477.1| 50S ribosomal protein L28 [Ralstonia eutropha H16]
gi|194290594|ref|YP_002006501.1| 50S ribosomal protein l28 [Cupriavidus taiwanensis LMG 19424]
gi|339327090|ref|YP_004686783.1| 50S ribosomal protein L28 [Cupriavidus necator N-1]
gi|421745484|ref|ZP_16183334.1| 50S ribosomal protein L28 [Cupriavidus necator HPC(L)]
gi|122946632|sp|Q0K7B2.1|RL28_RALEH RecName: Full=50S ribosomal protein L28
gi|123624202|sp|Q46XN9.1|RL28_RALEJ RecName: Full=50S ribosomal protein L28
gi|226738062|sp|B3R6F8.1|RL28_CUPTR RecName: Full=50S ribosomal protein L28
gi|72119831|gb|AAZ62094.1| LSU ribosomal protein L28P [Ralstonia eutropha JMP134]
gi|113527764|emb|CAJ94109.1| LSU ribosomal protein L28 [Ralstonia eutropha H16]
gi|193224429|emb|CAQ70440.1| 50S ribosomal subunit protein L28 [Cupriavidus taiwanensis LMG
19424]
gi|338167247|gb|AEI78302.1| 50S ribosomal protein L28 [Cupriavidus necator N-1]
gi|409776025|gb|EKN57460.1| 50S ribosomal protein L28 [Cupriavidus necator HPC(L)]
Length = 77
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R F +R + ++V+ LR IDK GID
Sbjct: 9 GKAPMVGNNVSH-ANNKTKRRFLPNLQNRRFFVESENRWVSLRVSNAGLRLIDKK-GIDS 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|158929977|gb|ABW82958.1| 50S ribosomal protein L28 [uncultured bacterium pEAF66]
Length = 78
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q +R+F +R + ++++ LR IDK GI
Sbjct: 7 VTGKGPMVGNNVSH-ANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKV-GI 64
Query: 109 DEYLL 113
D L+
Sbjct: 65 DAVLV 69
>gi|293606876|ref|ZP_06689224.1| 50S ribosomal protein L28 [Achromobacter piechaudii ATCC 43553]
gi|292814728|gb|EFF73861.1| 50S ribosomal protein L28 [Achromobacter piechaudii ATCC 43553]
Length = 66
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYL 112
GN VS NKT+R + PN+Q +R + +R +R++V+ A+R IDK GID L
Sbjct: 3 GNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSAKAIRTIDK-NGIDAVL 56
>gi|451936293|ref|YP_007460147.1| large subunit ribosomal protein L28 [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777216|gb|AGF48191.1| large subunit ribosomal protein L28 [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 71
Score = 43.9 bits (102), Expect = 0.044, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + PN+Q +R + +R IR+KV+ A+R IDK G
Sbjct: 9 GKAPMVGNNVSH-ANNKTKRRFLPNLQSRRFWIEEENRWIRLKVSAKAIRTIDKNG 63
>gi|313206700|ref|YP_004045877.1| 50S ribosomal protein l28p [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|416109274|ref|ZP_11591233.1| LSU ribosomal protein L28p [Riemerella anatipestifer RA-YM]
gi|312446016|gb|ADQ82371.1| LSU ribosomal protein L28P [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|315023767|gb|EFT36769.1| LSU ribosomal protein L28p [Riemerella anatipestifer RA-YM]
Length = 78
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R ++ N+ EK+ + ++HI +KV+ H LR I+K G
Sbjct: 7 ITGKRAMVGNHVSH-ANNKTKRRFEINLLEKKFYLPEQEKHITLKVSAHGLRVINKIG 63
>gi|261856607|ref|YP_003263890.1| 50S ribosomal protein L28 [Halothiobacillus neapolitanus c2]
gi|261837076|gb|ACX96843.1| ribosomal protein L28 [Halothiobacillus neapolitanus c2]
Length = 78
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKTRR + PN+ KR + R + ++V+T+A+R IDK G
Sbjct: 8 TGKRPAVGNNVSH-ANNKTRRRFLPNLHHKRFWVESEGRFVTLRVSTNAIRTIDKVG 63
>gi|332666735|ref|YP_004449523.1| 50S ribosomal protein L28 [Haliscomenobacter hydrossis DSM 1100]
gi|332335549|gb|AEE52650.1| 50S ribosomal protein L28 [Haliscomenobacter hydrossis DSM 1100]
Length = 87
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS KT+R + PN+Q+KR F D+ + +K++T A+R I K GI
Sbjct: 7 LTGKRPIVGNNVSHSN-RKTKRRFLPNLQKKRFFIPETDQWVTLKLSTSAMRNISKL-GI 64
Query: 109 DEYL 112
EYL
Sbjct: 65 YEYL 68
>gi|338210373|ref|YP_004654422.1| 50S ribosomal protein L28 [Runella slithyformis DSM 19594]
gi|336304188|gb|AEI47290.1| 50S ribosomal protein L28 [Runella slithyformis DSM 19594]
Length = 74
Score = 43.9 bits (102), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK + GN VS N+T+R + PN+Q K+ F ++ + +K+ T A+R I+K G
Sbjct: 7 ITGKRTRVGNNVSH-ANNRTKRKFYPNLQTKKFFVPSLNEWVEIKLATSAIRTINKKG 63
>gi|393905094|gb|EJD73868.1| hypothetical protein LOAG_18742 [Loa loa]
Length = 309
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNK--TRRNWKP-----NVQEKRLFSYIMDRHIRVKVTT 96
A GL+ G+ + G S K R+W P N++ +S ++D+H+++ +T
Sbjct: 100 ADNGLWGGETVVKGYVQSRPFTKKKILPRHWVPHFFFPNLKNVLTYSEVLDKHMKITMTE 159
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
R ID+ G+D YLL+TP + +++G
Sbjct: 160 RTCRLIDQHFGLDLYLLETPEIDIASKLG 188
>gi|390571893|ref|ZP_10252124.1| ribosomal protein L28 [Burkholderia terrae BS001]
gi|420256540|ref|ZP_14759380.1| ribosomal protein L28 [Burkholderia sp. BT03]
gi|389936127|gb|EIM98024.1| ribosomal protein L28 [Burkholderia terrae BS001]
gi|398043021|gb|EJL35964.1| ribosomal protein L28 [Burkholderia sp. BT03]
Length = 77
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V+ LR IDK GID
Sbjct: 9 GKAPMSGNNVSH-ANNKTKRRFLPNLQNRRFWVESENRWVRLRVSNAGLRLIDK-NGIDT 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|357407195|ref|YP_004919119.1| 50S ribosomal protein L28 [Methylomicrobium alcaliphilum 20Z]
gi|351719860|emb|CCE25536.1| 50S ribosomal subunit protein L28 [Methylomicrobium alcaliphilum
20Z]
Length = 78
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKTRR + PN+Q R + +R +R++V+T +R IDK GI
Sbjct: 7 VTGKRPVTGNNVSH-ANNKTRRRFCPNLQHHRFWVESENRWVRLRVSTKGMRVIDKR-GI 64
Query: 109 DEYL 112
D L
Sbjct: 65 DAVL 68
>gi|110637068|ref|YP_677275.1| 50S ribosomal protein L28 [Cytophaga hutchinsonii ATCC 33406]
gi|123354785|sp|Q11XD1.1|RL28_CYTH3 RecName: Full=50S ribosomal protein L28
gi|110279749|gb|ABG57935.1| LSU ribosomal protein L28P [Cytophaga hutchinsonii ATCC 33406]
Length = 80
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK + GN VS NKT+R + PN+Q+KR F +R + +K++T A++ I G
Sbjct: 7 ITGKKTRTGNNVSH-ANNKTKRTFAPNIQKKRFFLSEENRWVTLKLSTKAIKTISSKG 63
>gi|94311802|ref|YP_585012.1| 50S ribosomal protein L28 [Cupriavidus metallidurans CH34]
gi|430806782|ref|ZP_19433897.1| 50S ribosomal protein L28 [Cupriavidus sp. HMR-1]
gi|166226608|sp|Q1LJD3.1|RL28_RALME RecName: Full=50S ribosomal protein L28
gi|93355654|gb|ABF09743.1| 50S ribosomal subunit protein L28 [Cupriavidus metallidurans CH34]
gi|429500920|gb|EKZ99272.1| 50S ribosomal protein L28 [Cupriavidus sp. HMR-1]
Length = 77
Score = 43.9 bits (102), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R F +R + ++V+ LR IDK GID
Sbjct: 9 GKAPMVGNNVSH-ANNKTKRRFLPNLQNRRFFVESENRWVSLRVSNAGLRLIDKK-GIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|386853754|ref|YP_006203039.1| 50S ribosomal protein L28 [Borrelia garinii BgVir]
gi|365193788|gb|AEW68686.1| RpmB [Borrelia garinii BgVir]
Length = 92
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 13/78 (16%)
Query: 50 AGKHIQFGNRVSEDG------------GNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
GK FGN V G G KT+R +K N+ K+ F + R I +KV+ +
Sbjct: 8 TGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPDLGRSINIKVSAN 67
Query: 98 ALRCIDKAGGIDEYLLKT 115
ALR I K G+D +L K
Sbjct: 68 ALRSISKV-GLDAFLKKN 84
>gi|83814500|ref|YP_444179.1| 50S ribosomal protein L28 [Salinibacter ruber DSM 13855]
gi|123529898|sp|Q2S6K2.1|RL28_SALRD RecName: Full=50S ribosomal protein L28
gi|83755894|gb|ABC44007.1| ribosomal protein L28 [Salinibacter ruber DSM 13855]
Length = 78
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GN VS D KT R +K N+ EKR + DRH+++KV++ L+ I+K G
Sbjct: 15 GNSVS-DSNQKTNRRFKRNLHEKRFYIPSEDRHVKLKVSSKTLKTINKKG 63
>gi|397661515|ref|YP_006502215.1| 50S ribosomal protein L28 [Taylorella equigenitalis ATCC 35865]
gi|394349694|gb|AFN35608.1| 50S ribosomal protein L28 [Taylorella equigenitalis ATCC 35865]
gi|399114558|emb|CCG17352.1| 50S ribosomal protein L28 [Taylorella equigenitalis 14/56]
Length = 78
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK GN VS NKT+R + PN+Q R + +R +R+++++ ALR ID
Sbjct: 2 AKVCQVTGKRPMSGNNVSH-AHNKTKRRFLPNLQTHRFWVESENRWVRLRISSAALRTID 60
Query: 104 KAGGIDEYL 112
K GID L
Sbjct: 61 KK-GIDAVL 68
>gi|406999514|gb|EKE17123.1| 50S ribosomal protein L28 [uncultured bacterium]
Length = 77
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN+VS N+T+R + PN+Q +R + +R +R++V+ LR IDK GID
Sbjct: 8 TGKGPMVGNKVSH-ANNRTKRRFLPNLQYRRFWVESENRFVRLRVSNAGLRVIDK-NGID 65
Query: 110 EYLL 113
L+
Sbjct: 66 AILV 69
>gi|17547164|ref|NP_520566.1| 50S ribosomal protein L28 [Ralstonia solanacearum GMI1000]
gi|83746660|ref|ZP_00943709.1| LSU ribosomal protein L28P [Ralstonia solanacearum UW551]
gi|300690690|ref|YP_003751685.1| 50S ribosomal subunit protein L28 [Ralstonia solanacearum PSI07]
gi|300703308|ref|YP_003744910.1| 50S ribosomal protein L28 [Ralstonia solanacearum CFBP2957]
gi|386332671|ref|YP_006028840.1| 50S ribosomal protein L28 [Ralstonia solanacearum Po82]
gi|421891051|ref|ZP_16321881.1| 50S ribosomal subunit protein L28 [Ralstonia solanacearum K60-1]
gi|20139460|sp|Q8XWM9.1|RL28_RALSO RecName: Full=50S ribosomal protein L28
gi|17429466|emb|CAD16152.1| probable 50s ribosomal protein l28 [Ralstonia solanacearum GMI1000]
gi|83726613|gb|EAP73742.1| LSU ribosomal protein L28P [Ralstonia solanacearum UW551]
gi|299065958|emb|CBJ37139.1| 50S ribosomal subunit protein L28 [Ralstonia solanacearum CMR15]
gi|299070971|emb|CBJ42280.1| 50S ribosomal subunit protein L28 [Ralstonia solanacearum CFBP2957]
gi|299077750|emb|CBJ50388.1| 50S ribosomal subunit protein L28 [Ralstonia solanacearum PSI07]
gi|334195119|gb|AEG68304.1| 50S ribosomal protein L28 [Ralstonia solanacearum Po82]
gi|344170256|emb|CCA82655.1| 50S ribosomal subunit protein L28 [blood disease bacterium R229]
gi|344172147|emb|CCA84775.1| 50S ribosomal subunit protein L28 [Ralstonia syzygii R24]
gi|378963637|emb|CCF98629.1| 50S ribosomal subunit protein L28 [Ralstonia solanacearum K60-1]
Length = 77
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R + ++V+ LR IDK GIDE
Sbjct: 9 GKAPMVGNNVSH-ANNKTKRRFLPNLQNRRFWVESENRWVSLRVSNAGLRLIDKK-GIDE 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|91774668|ref|YP_544424.1| 50S ribosomal protein L28 [Methylobacillus flagellatus KT]
gi|253998048|ref|YP_003050111.1| 50S ribosomal protein L28 [Methylovorus glucosetrophus SIP3-4]
gi|313200113|ref|YP_004038771.1| 50S ribosomal protein L28 [Methylovorus sp. MP688]
gi|122400322|sp|Q1H4K4.1|RL28_METFK RecName: Full=50S ribosomal protein L28
gi|91708655|gb|ABE48583.1| LSU ribosomal protein L28P [Methylobacillus flagellatus KT]
gi|253984727|gb|ACT49584.1| ribosomal protein L28 [Methylovorus glucosetrophus SIP3-4]
gi|312439429|gb|ADQ83535.1| ribosomal protein L28 [Methylovorus sp. MP688]
Length = 78
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q ++ + +R + +++T ALR IDK GID
Sbjct: 9 GKKPMVGNNVSH-ANNKTKRRFLPNLQNRKFWVESENRWVSLRITNAALRTIDK-NGIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|408670971|ref|YP_006871042.1| 50S ribosomal protein L28 [Borrelia garinii NMJW1]
gi|407240793|gb|AFT83676.1| 50S ribosomal protein L28 [Borrelia garinii NMJW1]
Length = 92
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG------------GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
A++ GK FGN V G G KT+R +K N+ K+ F + R I
Sbjct: 2 ARKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPDLGRSIN 61
Query: 92 VKVTTHALRCIDKAGGIDEYLLKT 115
+KV+ +ALR I K G+D +L K
Sbjct: 62 IKVSANALRSISKV-GLDAFLKKN 84
>gi|312113448|ref|YP_004011044.1| 50S ribosomal protein L28 [Rhodomicrobium vannielii ATCC 17100]
gi|311218577|gb|ADP69945.1| ribosomal protein L28 [Rhodomicrobium vannielii ATCC 17100]
Length = 102
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK G+ VS KT+R + PN+ L S + R +R++++ +ALR ++ GG+
Sbjct: 7 LTGKGGLVGHLVSHSN-IKTKRRYLPNLCNVTLISDSLGRGVRLRISANALRSVEHRGGL 65
Query: 109 DEYLLK 114
D +LLK
Sbjct: 66 DAFLLK 71
>gi|194099564|ref|YP_002002694.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae NCCP11945]
gi|313667723|ref|YP_004048007.1| 50S ribosomal protein L28 [Neisseria lactamica 020-06]
gi|345874641|ref|ZP_08826441.1| 50S ribosomal subunit protein L28 [Neisseria weaveri LMG 5135]
gi|385336516|ref|YP_005890463.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae TCDC-NG08107]
gi|417958114|ref|ZP_12601031.1| 50S ribosomal subunit protein L28 [Neisseria weaveri ATCC 51223]
gi|427827807|ref|ZP_18994830.1| ribosomal protein L28 [Neisseria meningitidis H44/76]
gi|193934854|gb|ACF30678.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae NCCP11945]
gi|313005185|emb|CBN86618.1| 50S ribosomal protein L28 [Neisseria lactamica 020-06]
gi|316984322|gb|EFV63296.1| ribosomal protein L28 [Neisseria meningitidis H44/76]
gi|317165059|gb|ADV08600.1| 50S ribosomal protein L28 [Neisseria gonorrhoeae TCDC-NG08107]
gi|343967506|gb|EGV35751.1| 50S ribosomal subunit protein L28 [Neisseria weaveri ATCC 51223]
gi|343970000|gb|EGV38198.1| 50S ribosomal subunit protein L28 [Neisseria weaveri LMG 5135]
Length = 71
Score = 43.9 bits (102), Expect = 0.054, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + PN+Q +R + +R +R++V+ ALR IDK G
Sbjct: 3 GKRPMSGNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAALRTIDKVG 57
>gi|74318607|ref|YP_316347.1| 50S ribosomal protein L28 [Thiobacillus denitrificans ATCC 25259]
gi|123611211|sp|Q3SFR4.1|RL28_THIDA RecName: Full=50S ribosomal protein L28
gi|74058102|gb|AAZ98542.1| ribosomal protein L28 [Thiobacillus denitrificans ATCC 25259]
Length = 78
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+ + GK GN VS NKT+R + PN+Q +R + +R +R++++ ALR ID
Sbjct: 2 ARVCVVTGKKPMVGNNVSH-ANNKTKRRFLPNLQYRRFWVESENRWVRLRLSNAALRTID 60
Query: 104 KAGGIDEYL 112
K GI+ L
Sbjct: 61 K-NGIESVL 68
>gi|399017934|ref|ZP_10720123.1| ribosomal protein L28 [Herbaspirillum sp. CF444]
gi|398102701|gb|EJL92881.1| ribosomal protein L28 [Herbaspirillum sp. CF444]
Length = 78
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q +R+F +R + ++++ LR IDK GI
Sbjct: 7 VTGKGPMVGNNVSH-ANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKV-GI 64
Query: 109 DEYL 112
D L
Sbjct: 65 DAVL 68
>gi|312076938|ref|XP_003141083.1| hypothetical protein LOAG_05498 [Loa loa]
Length = 611
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNK--TRRNWKP-----NVQEKRLFSYIMDRHIRVKVTT 96
A GL+ G+ + G S K R+W P N++ +S ++D+H+++ +T
Sbjct: 100 ADNGLWGGETVVKGYVQSRPFTKKKILPRHWVPHFFFPNLKNVLTYSEVLDKHMKITMTE 159
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
R ID+ G+D YLL+TP + +++G
Sbjct: 160 RTCRLIDQHFGLDLYLLETPEIDIASKLG 188
>gi|17536507|ref|NP_493672.1| Protein MRPL-28 [Caenorhabditis elegans]
gi|351064451|emb|CCD72839.1| Protein MRPL-28 [Caenorhabditis elegans]
Length = 310
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 20/127 (15%)
Query: 74 PNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDT--------EMG 125
P ++ L+S I+D++I+V VT A+R ID+ G+D Y+L++ +D+ EM
Sbjct: 135 PALKNVVLYSEILDKYIKVTVTERAMRLIDEHFGLDYYILESKEIDLDSKFANSLKREML 194
Query: 126 LYWKTKIEKLYEELGQTEVAFFTPEEEAKLEQDFKDMKLAQRAARRELRRQMYGGSSKQK 185
L T E YEE E++A +++ + D + +R A + ++ + KQ+
Sbjct: 195 LTLTT--ESYYEE---------NDEKKAYIKEKYADFVIPEREAEW-IGLELNEAARKQQ 242
Query: 186 QIEQGSA 192
+E +A
Sbjct: 243 DMEDSTA 249
>gi|51598608|ref|YP_072796.1| 50S ribosomal protein L28 [Borrelia garinii PBi]
gi|67461376|sp|Q661R7.1|RL28_BORGA RecName: Full=50S ribosomal protein L28
gi|51573179|gb|AAU07204.1| ribosomal protein L28 [Borrelia garinii PBi]
Length = 92
Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG------------GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
A++ GK FGN V G G KT+R +K N+ K+ F + R I
Sbjct: 2 ARKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPELGRSIN 61
Query: 92 VKVTTHALRCIDKAGGIDEYLLKT 115
+KV+ +ALR I K G+D +L K
Sbjct: 62 IKVSANALRSISKV-GLDAFLKKN 84
>gi|257454608|ref|ZP_05619864.1| ribosomal protein L28 [Enhydrobacter aerosaccus SK60]
gi|257447918|gb|EEV22905.1| ribosomal protein L28 [Enhydrobacter aerosaccus SK60]
Length = 78
Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKTRR + PN+ R + +R +++++TT +R IDK GID
Sbjct: 8 TGKRPAVGNNVSH-ANNKTRRRFLPNLHTHRFWVESENRFVKLRLTTKGMRIIDKV-GID 65
Query: 110 EYL 112
+ L
Sbjct: 66 QVL 68
>gi|388566677|ref|ZP_10153120.1| 50S ribosomal protein L28 [Hydrogenophaga sp. PBC]
gi|388266021|gb|EIK91568.1| 50S ribosomal protein L28 [Hydrogenophaga sp. PBC]
Length = 77
Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++V+ ALR IDK GID
Sbjct: 9 GKKPMVGNNVSH-ANNKTKRRFLPNLQYRRFWVESENRWVRLRVSGAALRLIDKK-GIDV 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|323332124|gb|EGA73535.1| Mrpl24p [Saccharomyces cerevisiae AWRI796]
Length = 107
Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 13 VRKVGGEKNLAPGVKESL-----KKCVPDSRI----VMNRAKRGLFAGKHIQFGNRVSED 63
RK+ + N G + L +K PD + + ++ +GL+ G +QFGN +SE
Sbjct: 29 TRKIAKQPNYQVGDAKPLHMPKERKKFPDYKYGESNIFKQSNKGLYGGSFVQFGNNISES 88
Query: 64 GGNKTRRNWKPNVQEKR 80
KTR+ W PNV +KR
Sbjct: 89 KA-KTRKKWLPNVVKKR 104
>gi|134095643|ref|YP_001100718.1| 50S ribosomal protein L28 [Herminiimonas arsenicoxydans]
gi|166226581|sp|A4G7W0.1|RL28_HERAR RecName: Full=50S ribosomal protein L28
gi|133739546|emb|CAL62597.1| 50S ribosomal subunit protein L28 [Herminiimonas arsenicoxydans]
Length = 78
Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q +R+F +R + ++++ LR IDK GI
Sbjct: 7 VTGKGPMVGNNVSH-ANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKI-GI 64
Query: 109 DEYLL 113
D L+
Sbjct: 65 DAVLV 69
>gi|410867275|ref|YP_006981886.1| 50S ribosomal protein L28 1 [Propionibacterium acidipropionici ATCC
4875]
gi|410823916|gb|AFV90531.1| 50S ribosomal protein L28 1 [Propionibacterium acidipropionici ATCC
4875]
Length = 78
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R G +GN VS TRR W+PN+Q KR + + R +++++T A++ ID
Sbjct: 2 ARRCQVRGARPGYGNSVSHSQ-RHTRRRWEPNLQNKRYWVPSLGRQVKLRLTPKAMKIID 60
Query: 104 KAG 106
+ G
Sbjct: 61 RRG 63
>gi|182680325|ref|YP_001834471.1| 50S ribosomal protein L28 [Beijerinckia indica subsp. indica ATCC
9039]
gi|226738033|sp|B2IEP2.1|RL28_BEII9 RecName: Full=50S ribosomal protein L28
gi|182636208|gb|ACB96982.1| ribosomal protein L28 [Beijerinckia indica subsp. indica ATCC 9039]
Length = 98
Score = 43.5 bits (101), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK + GN VS KTR + PN+ L S + R I +V LR ++
Sbjct: 2 SRRCELTGKAVLTGNLVSHSN-RKTRTRFLPNLCNVTLISDTLQRRIHFRVAAATLRSVE 60
Query: 104 KAGGIDEYLLK 114
GG+D +L+K
Sbjct: 61 HRGGLDAFLVK 71
>gi|71908756|ref|YP_286343.1| 50S ribosomal protein L28 [Dechloromonas aromatica RCB]
gi|123626758|sp|Q47BA8.1|RL28_DECAR RecName: Full=50S ribosomal protein L28
gi|71848377|gb|AAZ47873.1| LSU ribosomal protein L28P [Dechloromonas aromatica RCB]
Length = 77
Score = 43.5 bits (101), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN+VS N+T+R + PN+Q +R + +R +R++V+ LR IDK GID
Sbjct: 9 GKAPMVGNKVSH-ANNRTKRRFLPNLQYRRFWVESENRFLRLRVSNAGLRLIDK-NGIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|398833796|ref|ZP_10591917.1| ribosomal protein L28 [Herbaspirillum sp. YR522]
gi|398220855|gb|EJN07290.1| ribosomal protein L28 [Herbaspirillum sp. YR522]
Length = 78
Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q +R+F +R + ++++ LR IDK GI
Sbjct: 7 VTGKGPMVGNNVSH-ANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKI-GI 64
Query: 109 DEYLL 113
D L+
Sbjct: 65 DAVLV 69
>gi|255037319|ref|YP_003087940.1| 50S ribosomal protein L28 [Dyadobacter fermentans DSM 18053]
gi|254950075|gb|ACT94775.1| ribosomal protein L28 [Dyadobacter fermentans DSM 18053]
Length = 79
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK +GK + GN VS NKT+R + PN+Q+KR F + +KV ALR I+
Sbjct: 2 AKVCQISGKRTRVGNNVSH-ANNKTKRKFFPNLQKKRFFLPSSGEWVTLKVAASALRTIN 60
Query: 104 KAG 106
K G
Sbjct: 61 KNG 63
>gi|224531933|ref|ZP_03672565.1| ribosomal protein L28 [Borrelia valaisiana VS116]
gi|224511398|gb|EEF81804.1| ribosomal protein L28 [Borrelia valaisiana VS116]
Length = 92
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG------------GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
A++ GK FGN V G G KT+R +K N+ K+ F + R I
Sbjct: 2 ARKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPNLGRSIN 61
Query: 92 VKVTTHALRCIDKAGGIDEYLLKT 115
+KV+ +ALR I K G+D +L K
Sbjct: 62 IKVSANALRSISKM-GLDAFLKKN 84
>gi|365875398|ref|ZP_09414927.1| 50S ribosomal protein l28p [Elizabethkingia anophelis Ag1]
gi|442588204|ref|ZP_21007016.1| 50S ribosomal protein l28p [Elizabethkingia anophelis R26]
gi|365757046|gb|EHM98956.1| 50S ribosomal protein l28p [Elizabethkingia anophelis Ag1]
gi|442561909|gb|ELR79132.1| 50S ribosomal protein l28p [Elizabethkingia anophelis R26]
Length = 78
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R ++ N+ EK+ + ++H+ +KV+ H LR I+K G
Sbjct: 7 ITGKRAMVGNHVSH-ANNKTKRRFEINLLEKKFYLPEQEKHVTLKVSAHGLRVINKIG 63
>gi|258653985|ref|YP_003203141.1| 50S ribosomal protein L28 [Nakamurella multipartita DSM 44233]
gi|258557210|gb|ACV80152.1| ribosomal protein L28 [Nakamurella multipartita DSM 44233]
Length = 78
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 56 FGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
FG VS +T R W+PN+Q +R + + R +R++V+T LR ID+ G
Sbjct: 14 FGKSVSHSH-QRTNRRWEPNLQHRRFYVPSLRRTVRLRVSTKGLRIIDRRG 63
>gi|383500954|ref|YP_005414313.1| 50S ribosomal protein L28 [Rickettsia australis str. Cutlack]
gi|378931965|gb|AFC70470.1| 50S ribosomal protein L28 [Rickettsia australis str. Cutlack]
Length = 97
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G + +GN VS KTRR ++PN++ + S I R+ V + ++KAGG
Sbjct: 7 LTGVGVLYGNNVSHSQ-RKTRRRFEPNLRSVKFTSDITAGEYRLSVNARCISSVEKAGGF 65
Query: 109 DEYLLK 114
D Y+L+
Sbjct: 66 DAYILQ 71
>gi|357627563|gb|EHJ77216.1| mitochondrial ribosomal protein L28 [Danaus plexippus]
Length = 281
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 30/187 (16%)
Query: 47 GLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G++ G+ + G + + + W P ++ + S +++ H+ V VT ++ I+
Sbjct: 87 GIWGGEAVIKGFQKRDPNRRRVPHYWVPVLKRTVVKSEVLNTHLSVTVTDRTIKLINDHY 146
Query: 107 GIDEYLLKTPYHKMDTEMGLYWKTKI------------------EKLYEELGQTEVAFFT 148
G D YLLKTP + + + L K +I + +YEE +T ++ +T
Sbjct: 147 GFDHYLLKTPACDLVSMLALKLKKQILTELMNGCPRHANNPEKQKSVYEEY-KTYLSSYT 205
Query: 149 PEE-----EAKLEQDFKDMKLAQRAARRELRRQMY------GGSSKQKQIEQGSADTQET 197
PEE E K KL + A + + MY +K+ Q + ++D T
Sbjct: 206 PEEIEWYGLTWYEALNKVAKLKEAANKPVPLKHMYRKKLIENLQAKESQNDTSTSDIAST 265
Query: 198 AEEAAKI 204
AK+
Sbjct: 266 TSWLAKM 272
>gi|145589914|ref|YP_001156511.1| 50S ribosomal protein L28 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|456064050|ref|YP_007503020.1| ribosomal protein L28 [beta proteobacterium CB]
gi|189029449|sp|A4SZN3.1|RL28_POLSQ RecName: Full=50S ribosomal protein L28
gi|145048320|gb|ABP34947.1| LSU ribosomal protein L28P [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|455441347|gb|AGG34285.1| ribosomal protein L28 [beta proteobacterium CB]
Length = 77
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK GN VS NKT+R + PN+Q +R + +R I +++T LR ID
Sbjct: 2 AKVCQVTGKKPMVGNNVSH-ANNKTKRRFLPNLQNRRFWVESENRWISLRLTNAGLRVID 60
Query: 104 KAGGIDEYL 112
K GID L
Sbjct: 61 K-NGIDAVL 68
>gi|315498114|ref|YP_004086918.1| 50S ribosomal protein L28 [Asticcacaulis excentricus CB 48]
gi|315416126|gb|ADU12767.1| ribosomal protein L28 [Asticcacaulis excentricus CB 48]
Length = 98
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 67 KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
KT+R + P+++E L S + + R+K++ ALR +D GG+D +L+K DTE+ L
Sbjct: 24 KTKRRFLPSLRETALQSEALGQSFRLKISNAALRTLDFKGGLDAFLVKAD----DTELSL 79
>gi|216264106|ref|ZP_03436100.1| ribosomal protein L28 [Borrelia afzelii ACA-1]
gi|219684562|ref|ZP_03539505.1| ribosomal protein L28 [Borrelia garinii PBr]
gi|384206845|ref|YP_005592566.1| 50S ribosomal protein L28 [Borrelia afzelii PKo]
gi|215980150|gb|EEC20972.1| ribosomal protein L28 [Borrelia afzelii ACA-1]
gi|219671924|gb|EED28978.1| ribosomal protein L28 [Borrelia garinii PBr]
gi|342856728|gb|AEL69576.1| ribosomal protein L28 [Borrelia afzelii PKo]
Length = 92
Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG------------GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
A++ GK FGN V G G KT+R +K N+ K+ F + R I
Sbjct: 2 ARKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPDLGRSIN 61
Query: 92 VKVTTHALRCIDKAGGIDEYLLKT 115
+KV+ +ALR I K G+D +L K
Sbjct: 62 IKVSANALRSISKI-GLDAFLKKN 84
>gi|260063513|ref|YP_003196593.1| 50S ribosomal protein L28 [Robiginitalea biformata HTCC2501]
gi|88782957|gb|EAR14131.1| 50S ribosomal protein L28 [Robiginitalea biformata HTCC2501]
Length = 78
Score = 43.1 bits (100), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK QFGN VS NKTRR + N+ +KR + DR I +KV+ AL+ I++ G
Sbjct: 7 LTGKRAQFGNNVSFSI-NKTRRRFDVNLSKKRFYIPEEDRWITLKVSARALKAINRKG 63
>gi|111115174|ref|YP_709792.1| 50S ribosomal protein L28 [Borrelia afzelii PKo]
gi|122956384|sp|Q0SNG2.1|RL28_BORAP RecName: Full=50S ribosomal protein L28
gi|110890448|gb|ABH01616.1| ribosomal protein L28 [Borrelia afzelii PKo]
Length = 92
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG------------GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
A++ GK FGN V G G KT+R +K N+ K+ F + R I
Sbjct: 2 ARKCEITGKKTMFGNNVPRKGLAKKKGGARQHIGVKTKRTFKVNLINKKFFIPDLGRSIN 61
Query: 92 VKVTTHALRCIDKAGGIDEYLLKT 115
+KV+ +ALR I K G+D +L K
Sbjct: 62 IKVSANALRSISKI-GLDAFLKKN 84
>gi|157803281|ref|YP_001491830.1| 50S ribosomal protein L28 [Rickettsia canadensis str. McKiel]
gi|379022492|ref|YP_005299153.1| 50S ribosomal protein L28 [Rickettsia canadensis str. CA410]
gi|166226613|sp|A8EXG2.1|RL28_RICCK RecName: Full=50S ribosomal protein L28
gi|157784544|gb|ABV73045.1| 50S ribosomal protein L28 [Rickettsia canadensis str. McKiel]
gi|376323430|gb|AFB20671.1| 50S ribosomal protein L28 [Rickettsia canadensis str. CA410]
Length = 97
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G + +GN VS KTRR ++PN++ + S I R+ V + ++KAGG
Sbjct: 7 LTGVGVLYGNNVSHSQ-RKTRRRFEPNLRSVKFKSDITSGAYRLLVNARCISSVEKAGGF 65
Query: 109 DEYLLK 114
D Y+LK
Sbjct: 66 DAYILK 71
>gi|237747513|ref|ZP_04577993.1| LSU ribosomal protein L28P [Oxalobacter formigenes OXCC13]
gi|229380956|gb|EEO31047.1| LSU ribosomal protein L28P [Oxalobacter formigenes OXCC13]
Length = 78
Score = 43.1 bits (100), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN+VS NKTRR + PN+ +R F +R + ++V+ LR IDK GI
Sbjct: 7 ITGKKPMSGNKVSH-ANNKTRRRFMPNLHYRRFFVESENRWVSLRVSNAGLRVIDKL-GI 64
Query: 109 DEYL 112
D L
Sbjct: 65 DAVL 68
>gi|89901949|ref|YP_524420.1| 50S ribosomal protein L28 [Rhodoferax ferrireducens T118]
gi|122478563|sp|Q21TL4.1|RL28_RHOFD RecName: Full=50S ribosomal protein L28
gi|89346686|gb|ABD70889.1| LSU ribosomal protein L28P [Rhodoferax ferrireducens T118]
Length = 77
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN+VS N+T+R + PN+Q +R + +R IR++++ LR IDK GID
Sbjct: 8 TGKGPMVGNKVSH-ANNRTKRRFLPNLQYRRFWVETENRWIRLRISNAGLRLIDK-NGID 65
Query: 110 EYL 112
L
Sbjct: 66 VVL 68
>gi|387130135|ref|YP_006293025.1| 50S ribosomal protein L28 [Methylophaga sp. JAM7]
gi|386271424|gb|AFJ02338.1| LSU ribosomal protein L28p [Methylophaga sp. JAM7]
Length = 78
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+ R++ +R ++++V+ H LR IDK GI
Sbjct: 7 VTGKRPMSGNNVSH-ANNKTKRRFLPNLHSHRIWVESENRWVKLRVSNHGLRIIDKR-GI 64
Query: 109 DEYL 112
D L
Sbjct: 65 DSVL 68
>gi|300310516|ref|YP_003774608.1| 50S ribosomal protein L28 [Herbaspirillum seropedicae SmR1]
gi|415941250|ref|ZP_11555740.1| 50S ribosomal protein L28 [Herbaspirillum frisingense GSF30]
gi|300073301|gb|ADJ62700.1| 50S ribosomal subunit L28 protein [Herbaspirillum seropedicae SmR1]
gi|407759056|gb|EKF68804.1| 50S ribosomal protein L28 [Herbaspirillum frisingense GSF30]
Length = 78
Score = 43.1 bits (100), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q +R+F +R + ++++ LR IDK GI
Sbjct: 7 VTGKGPMVGNNVSH-ANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKI-GI 64
Query: 109 DEYL 112
D L
Sbjct: 65 DAVL 68
>gi|392402800|ref|YP_006439412.1| LSU ribosomal protein L28P [Turneriella parva DSM 21527]
gi|390610754|gb|AFM11906.1| LSU ribosomal protein L28P [Turneriella parva DSM 21527]
Length = 73
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A++ G+ +FGN VS KTRR +K NV +KR+F R I + V+T ALR +
Sbjct: 2 ARKCDLTGQGTRFGNNVSHSH-RKTRRTFKSNVHKKRIFLPEEGRFITLNVSTRALRTLQ 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|340786423|ref|YP_004751888.1| 50S ribosomal protein L28 [Collimonas fungivorans Ter331]
gi|340551690|gb|AEK61065.1| LSU ribosomal protein L28p [Collimonas fungivorans Ter331]
Length = 78
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q +R+F +R + ++++ LR IDK GI
Sbjct: 7 VTGKGPMVGNNVSH-ANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKI-GI 64
Query: 109 DEYL 112
D L
Sbjct: 65 DAVL 68
>gi|161353680|ref|NP_627635.2| 50S ribosomal protein L28 [Streptomyces coelicolor A3(2)]
gi|14195690|sp|Q9X8K8.2|RL28B_STRCO RecName: Full=50S ribosomal protein L28-2
Length = 78
Score = 43.1 bits (100), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 48 LFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
+ G FGNR+S +T R + PN+Q KR + +RH+R++++T +R +D G
Sbjct: 6 MLTGARPGFGNRISHSH-RRTSRRFDPNIQTKRYWLPSENRHVRLRLSTKGIRTVDSIG 63
>gi|418476087|ref|ZP_13045432.1| 50S ribosomal protein L28 [Streptomyces coelicoflavus ZG0656]
gi|371543298|gb|EHN72113.1| 50S ribosomal protein L28 [Streptomyces coelicoflavus ZG0656]
Length = 78
Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 48 LFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
+ G FGNR+S +T R + PN+Q KR + RH+R++++T +R +D G
Sbjct: 6 MLTGAQPGFGNRISHSH-RRTSRRFDPNIQTKRYWLPSESRHVRLRLSTKGIRTVDSIG 63
>gi|383791940|ref|YP_005476514.1| 50S ribosomal protein L28 [Spirochaeta africana DSM 8902]
gi|383108474|gb|AFG38807.1| ribosomal protein L28 [Spirochaeta africana DSM 8902]
Length = 80
Score = 43.1 bits (100), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 45 KRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDK 104
+R GK GN VS N +RR K N+Q KRLF ++R +RV+++ ALR + K
Sbjct: 3 RRCRLTGKGTVAGNNVSH-AMNHSRRVQKANLQYKRLFVPELNRFVRVRLSARALRTVSK 61
Query: 105 AG 106
G
Sbjct: 62 VG 63
>gi|34498911|ref|NP_903126.1| 50S ribosomal protein L28 [Chromobacterium violaceum ATCC 12472]
gi|67461496|sp|Q7NSH0.1|RL28_CHRVO RecName: Full=50S ribosomal protein L28
gi|34104760|gb|AAQ61117.1| 50S ribosomal protein L28 [Chromobacterium violaceum ATCC 12472]
Length = 77
Score = 43.1 bits (100), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKT+R + PN+Q ++ + +R +R++V+ ALR IDK GID
Sbjct: 8 TGKRPMTGNNVSH-ANNKTKRRFLPNLQYRKFWVESENRWVRLRVSNAALRTIDKV-GID 65
Query: 110 EYL 112
L
Sbjct: 66 VVL 68
>gi|296128027|ref|YP_003635277.1| 50S ribosomal protein L28 [Cellulomonas flavigena DSM 20109]
gi|296019842|gb|ADG73078.1| ribosomal protein L28 [Cellulomonas flavigena DSM 20109]
Length = 78
Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK FG VS G +T R + PN+Q +R + + RH+R++V+T ++ ID+ G
Sbjct: 9 GKAPTFGRTVSHSG-RRTPRRFVPNIQRRRYWVPSLGRHVRLRVSTDGIKVIDRRG 63
>gi|328722845|ref|XP_003247689.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like
[Acyrthosiphon pisum]
Length = 266
Score = 43.1 bits (100), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 47 GLFAGKHIQFGNRVSEDGGNKTRRN----WKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
G++ G+ + G + GNK + W P +++ ++S I++ ++ VT AL I
Sbjct: 84 GIWGGEAVVQGFK---QNGNKYKSRVPHFWTPTLKKSVVYSEILNEYVSTTVTEKALDLI 140
Query: 103 DKAGGIDEYLLKTPYHKMDTEMGL 126
+K G+D YLLKT + T + L
Sbjct: 141 NKNYGLDHYLLKTAACDLRTTLSL 164
>gi|157825271|ref|YP_001492991.1| 50S ribosomal protein L28 [Rickettsia akari str. Hartford]
gi|166226611|sp|A8GM58.1|RL28_RICAH RecName: Full=50S ribosomal protein L28
gi|157799229|gb|ABV74483.1| 50S ribosomal protein L28 [Rickettsia akari str. Hartford]
Length = 97
Score = 43.1 bits (100), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G + +GN VS KTRR ++PN++ + S I R+ V + ++KAGG
Sbjct: 7 LTGVGVLYGNNVSHSQ-RKTRRRFEPNLRSVKFTSDITAGKYRLSVNARCISSVEKAGGF 65
Query: 109 DEYLLK 114
D Y+L+
Sbjct: 66 DAYILQ 71
>gi|25027499|ref|NP_737553.1| 50S ribosomal protein L28 [Corynebacterium efficiens YS-314]
gi|67461532|sp|Q8FR24.1|RL28_COREF RecName: Full=50S ribosomal protein L28
gi|23492781|dbj|BAC17753.1| putative 50S ribosomal protein L28 [Corynebacterium efficiens
YS-314]
Length = 78
Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G+ FG VS +T R W PNVQ ++ F M R I + V+T L+ ID+ G
Sbjct: 8 TGRQPSFGKSVSHSH-RRTSRRWNPNVQRRKFFVPSMGRTITLTVSTKGLKVIDRDG 63
>gi|255019877|ref|ZP_05291952.1| LSU ribosomal protein L28p [Acidithiobacillus caldus ATCC 51756]
gi|340783251|ref|YP_004749858.1| 50S ribosomal protein L28p [Acidithiobacillus caldus SM-1]
gi|254970657|gb|EET28144.1| LSU ribosomal protein L28p [Acidithiobacillus caldus ATCC 51756]
gi|340557402|gb|AEK59156.1| LSU ribosomal protein L28p [Acidithiobacillus caldus SM-1]
Length = 78
Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKTRR + PN+Q R + R +R++V+T +R IDK GI
Sbjct: 7 ITGKKPMAGNNVSH-ANNKTRRRFLPNLQYHRFWVESEQRWVRMRVSTKGMRTIDKK-GI 64
Query: 109 DEYL 112
D L
Sbjct: 65 DVVL 68
>gi|253995750|ref|YP_003047814.1| 50S ribosomal protein L28 [Methylotenera mobilis JLW8]
gi|253982429|gb|ACT47287.1| ribosomal protein L28 [Methylotenera mobilis JLW8]
Length = 78
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q ++ + +R + +++T ALR IDK GID
Sbjct: 9 GKKPMVGNNVSH-AQNKTKRRFLPNLQNRKFWVESENRWVSMRITNAALRTIDK-NGIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|407893612|ref|ZP_11152642.1| 50S ribosomal protein L28 [Diplorickettsia massiliensis 20B]
Length = 79
Score = 42.7 bits (99), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK+ GN VS KT+R + PN+Q RL+ R ++++V+ H LR I+K GI
Sbjct: 7 VTGKNPMVGNNVSHSN-RKTKRRFLPNLQTHRLWVASEKRFVKLRVSAHGLRIIEKR-GI 64
Query: 109 DEYLLK 114
D L K
Sbjct: 65 DAVLAK 70
>gi|119943848|ref|YP_941528.1| 50S ribosomal protein L28 [Psychromonas ingrahamii 37]
gi|166226607|sp|A1SR14.1|RL28_PSYIN RecName: Full=50S ribosomal protein L28
gi|119862452|gb|ABM01929.1| LSU ribosomal protein L28P [Psychromonas ingrahamii 37]
Length = 78
Score = 42.7 bits (99), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS N+TRR + PN+Q R + +R +++++TT +R IDK GID
Sbjct: 8 TGKRPAVGNNVSH-AKNRTRRRFLPNLQTHRFWVESENRFVKLRLTTKGMRIIDKK-GID 65
Query: 110 EYL 112
L
Sbjct: 66 SVL 68
>gi|399217813|emb|CCF74700.1| unnamed protein product [Babesia microti strain RI]
Length = 277
Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++ GL+ + + +VS NKTR KPNV K S ++ + V+V+T AL +
Sbjct: 45 SQTGLYHDEDFNYYTKVSY-SLNKTRIKLKPNVFRKLFESQALNTLVPVRVSTSALHEMA 103
Query: 104 KAGGIDEYLLKTPYHKMDTEMG 125
GG D Y+L T ++ +++G
Sbjct: 104 DKGGFDNYILNTTPEQLRSQLG 125
>gi|325982098|ref|YP_004294500.1| 50S ribosomal protein L28 [Nitrosomonas sp. AL212]
gi|325531617|gb|ADZ26338.1| ribosomal protein L28 [Nitrosomonas sp. AL212]
Length = 78
Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK G+ VS NKT+R + PN+Q ++ + +R I++++T ALR IDK GID
Sbjct: 8 TGKKPMSGHNVSH-ANNKTKRRFLPNLQHRKFWVESENRWIKLRLTNAALRTIDK-NGID 65
Query: 110 EYLLK 114
L+K
Sbjct: 66 AVLVK 70
>gi|398802487|ref|ZP_10561696.1| ribosomal protein L28 [Polaromonas sp. CF318]
gi|398099653|gb|EJL89906.1| ribosomal protein L28 [Polaromonas sp. CF318]
Length = 77
Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + N+Q +R + +R +R++V++ ALR IDK GID
Sbjct: 9 GKRPMVGNNVSH-ANNKTKRRFLVNLQYRRFWVESENRWVRLRVSSAALRLIDK-NGIDS 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|18447483|gb|AAL68304.1| RE47667p [Drosophila melanogaster]
Length = 302
Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
+P I + RG+ G+ + G + E + W PN++ + S+++D ++ V
Sbjct: 72 IPLPLIDTPESHRGMGGGEAVIKGFQKREQTKRRVPHFWVPNLRRSVVHSHVLDCYMSVV 131
Query: 94 VTTHALRCIDKAGGIDEYLLKT 115
VT L I + G D YLLK
Sbjct: 132 VTERTLEQIHECHGFDHYLLKN 153
>gi|408792065|ref|ZP_11203675.1| ribosomal protein L28 [Leptospira meyeri serovar Hardjo str. Went
5]
gi|408463475|gb|EKJ87200.1| ribosomal protein L28 [Leptospira meyeri serovar Hardjo str. Went
5]
Length = 94
Score = 42.7 bits (99), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+ + GK GN VS K RR WK NV K++F +R +RVK++T ALR +
Sbjct: 2 ARTCVVTGKGTTAGNNVSHSH-KKNRRIWKVNVITKKIFLEDENRWVRVKISTRALRTLR 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|322797333|gb|EFZ19445.1| hypothetical protein SINV_00972 [Solenopsis invicta]
Length = 280
Score = 42.7 bits (99), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 47 GLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G++ G+ I G + + W P +++ ++S ++D ++RV VT ALR I +
Sbjct: 79 GIWGGEAIVQGFKKKGIFKRRVPHFWIPTLKKSVVYSEVLDTYMRVIVTERALRLIHENY 138
Query: 107 GIDEYLLK 114
G D YLLK
Sbjct: 139 GFDHYLLK 146
>gi|404451605|ref|ZP_11016565.1| 50S ribosomal protein L28 [Indibacter alkaliphilus LW1]
gi|403762662|gb|EJZ23703.1| 50S ribosomal protein L28 [Indibacter alkaliphilus LW1]
Length = 80
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK Q GN VS NKT+R + PN+ +K + D I +KV T ALR I+
Sbjct: 2 AKVCDITGKRPQVGNNVSH-ANNKTKRRFYPNLHKKSFYVPEEDAWITLKVCTKALRTIN 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|183220423|ref|YP_001838419.1| 50S ribosomal protein L28 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189910536|ref|YP_001962091.1| 50S ribosomal protein L28 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|226732831|sp|B0SEH0.1|RL28_LEPBA RecName: Full=50S ribosomal protein L28
gi|226732832|sp|B0SMJ9.1|RL28_LEPBP RecName: Full=50S ribosomal protein L28
gi|167775212|gb|ABZ93513.1| 50S Ribosomal protein L28 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167778845|gb|ABZ97143.1| 50S ribosomal protein L28 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 96
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+ + GK GN VS K RR WK NV K++F +R +RVK++T ALR +
Sbjct: 2 ARTCVVTGKGTTAGNNVSHSH-KKNRRIWKVNVITKKIFLEDENRWVRVKISTRALRTLR 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|15594695|ref|NP_212484.1| 50S ribosomal protein L28 [Borrelia burgdorferi B31]
gi|218249319|ref|YP_002374870.1| ribosomal protein L28 [Borrelia burgdorferi ZS7]
gi|221217814|ref|ZP_03589282.1| ribosomal protein L28 [Borrelia burgdorferi 72a]
gi|223889036|ref|ZP_03623627.1| ribosomal protein L28 [Borrelia burgdorferi 64b]
gi|224533135|ref|ZP_03673735.1| ribosomal protein L28 [Borrelia burgdorferi WI91-23]
gi|225549021|ref|ZP_03769996.1| ribosomal protein L28 [Borrelia burgdorferi 94a]
gi|225550155|ref|ZP_03771115.1| ribosomal protein L28 [Borrelia burgdorferi 118a]
gi|226320431|ref|ZP_03795998.1| ribosomal protein L28 [Borrelia burgdorferi 29805]
gi|226321667|ref|ZP_03797193.1| ribosomal protein L28 [Borrelia burgdorferi Bol26]
gi|387826002|ref|YP_005805455.1| 50S ribosomal protein L28 [Borrelia burgdorferi JD1]
gi|387827264|ref|YP_005806546.1| 50S ribosomal protein L28 [Borrelia burgdorferi N40]
gi|3914732|sp|O51325.1|RL28_BORBU RecName: Full=50S ribosomal protein L28
gi|226738035|sp|B7J1S5.1|RL28_BORBZ RecName: Full=50S ribosomal protein L28
gi|2688254|gb|AAC66732.1| ribosomal protein L28 [Borrelia burgdorferi B31]
gi|218164507|gb|ACK74568.1| ribosomal protein L28 [Borrelia burgdorferi ZS7]
gi|221192491|gb|EEE18710.1| ribosomal protein L28 [Borrelia burgdorferi 72a]
gi|223885852|gb|EEF56951.1| ribosomal protein L28 [Borrelia burgdorferi 64b]
gi|224511862|gb|EEF82263.1| ribosomal protein L28 [Borrelia burgdorferi WI91-23]
gi|225369267|gb|EEG98720.1| ribosomal protein L28 [Borrelia burgdorferi 118a]
gi|225370247|gb|EEG99685.1| ribosomal protein L28 [Borrelia burgdorferi 94a]
gi|226232856|gb|EEH31609.1| ribosomal protein L28 [Borrelia burgdorferi Bol26]
gi|226234184|gb|EEH32898.1| ribosomal protein L28 [Borrelia burgdorferi 29805]
gi|312148522|gb|ADQ31181.1| ribosomal protein L28 [Borrelia burgdorferi JD1]
gi|312149317|gb|ADQ29388.1| ribosomal protein L28 [Borrelia burgdorferi N40]
Length = 92
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 13/81 (16%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG------------GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
A++ GK FGN V G G KT+R +K N+ K+ F + R +
Sbjct: 2 ARKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPNLGRSVS 61
Query: 92 VKVTTHALRCIDKAGGIDEYL 112
+KV+ +ALR I K G+D +L
Sbjct: 62 IKVSANALRSISKI-GLDAFL 81
>gi|349574793|ref|ZP_08886727.1| 50S ribosomal protein L28 [Neisseria shayeganii 871]
gi|348013667|gb|EGY52577.1| 50S ribosomal protein L28 [Neisseria shayeganii 871]
Length = 120
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 38 RIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
R+ M R + GK G+ VS NKT+R + PN+Q +R + +R +R++++
Sbjct: 41 RLTMARVCK--VTGKRPMSGHNVSH-ANNKTKRRFLPNLQTRRFWVESENRWVRLRISNA 97
Query: 98 ALRCIDKAGGIDEYL 112
ALR IDK GID L
Sbjct: 98 ALRTIDKV-GIDAVL 111
>gi|398345403|ref|ZP_10530106.1| 50S ribosomal protein L28 [Leptospira inadai serovar Lyme str. 10]
gi|398347383|ref|ZP_10532086.1| 50S ribosomal protein L28 [Leptospira broomii str. 5399]
Length = 93
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A++ + GK GN VS KTRR WK N+ +KR+F +R + V+++T ALR +
Sbjct: 2 ARKCVVTGKGTIAGNNVSHSH-LKTRRTWKINLIKKRIFLEDENRWVTVRISTRALRTLR 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|392968601|ref|ZP_10334017.1| ribosomal protein L28 [Fibrisoma limi BUZ 3]
gi|387842963|emb|CCH56071.1| ribosomal protein L28 [Fibrisoma limi BUZ 3]
Length = 79
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK + GN VS NKT+R + PN+Q+KR F + +KV T A++ I+K G
Sbjct: 7 ITGKRTRTGNNVSH-ANNKTKRKFYPNLQKKRFFVESTGEWVTLKVATSAIKTINKNG 63
>gi|197104188|ref|YP_002129565.1| 50S ribosomal protein L28 [Phenylobacterium zucineum HLK1]
gi|226699143|sp|B4RFQ5.1|RL28_PHEZH RecName: Full=50S ribosomal protein L28
gi|196477608|gb|ACG77136.1| 50S ribosomal protein L28 [Phenylobacterium zucineum HLK1]
Length = 98
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R G G+ VS KT+R + PN+ + + S + +++ ++VT ALR +D
Sbjct: 2 SRRCEITGVGPMVGHNVSHSN-IKTKRRFMPNLTKVTVLSDALGQNVTLRVTNAALRTVD 60
Query: 104 KAGGIDEYLLK 114
GG+D LLK
Sbjct: 61 AKGGLDAVLLK 71
>gi|225552377|ref|ZP_03773317.1| ribosomal protein L28 [Borrelia sp. SV1]
gi|225371375|gb|EEH00805.1| ribosomal protein L28 [Borrelia sp. SV1]
Length = 92
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 50 AGKHIQFGNRVSEDG------------GNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTH 97
GK FGN V G G KT+R +K N+ K+ F + R + +KV+ +
Sbjct: 8 TGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPNLGRSVSIKVSAN 67
Query: 98 ALRCIDKAGGIDEYL 112
ALR I K G+D +L
Sbjct: 68 ALRSISKI-GLDAFL 81
>gi|422349714|ref|ZP_16430603.1| 50S ribosomal protein L28 [Sutterella wadsworthensis 2_1_59BFAA]
gi|404657923|gb|EKB30803.1| 50S ribosomal protein L28 [Sutterella wadsworthensis 2_1_59BFAA]
Length = 77
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK G+ VS NKT+R + PN+Q +R + +R +R+++TT LR +DK GID
Sbjct: 9 GKAPMVGHHVSH-ANNKTKRRFMPNLQYRRFWVESENRWVRLRLTTAGLRTVDKI-GIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|350544832|ref|ZP_08914376.1| LSU ribosomal protein L28p [Candidatus Burkholderia kirkii UZHbot1]
gi|350527382|emb|CCD38223.1| LSU ribosomal protein L28p [Candidatus Burkholderia kirkii UZHbot1]
Length = 65
Score = 42.7 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYL 112
GN VS NKT+R + PN+Q +R F +R +R++V+ LR IDK GID L
Sbjct: 3 GNNVSH-ANNKTKRRFLPNLQNRRFFVESENRWVRLRVSNAGLRLIDK-NGIDAVL 56
>gi|422451017|ref|ZP_16527722.1| ribosomal protein L28 [Propionibacterium acnes HL030PA2]
gi|315109324|gb|EFT81300.1| ribosomal protein L28 [Propionibacterium acnes HL030PA2]
Length = 92
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 33 CVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRV 92
C P I M+R R G +FGN VS + T+R W PN+Q+KR + + R + +
Sbjct: 7 CNPWQEIPMSR--RCQVRGTKPEFGNNVSHSQRH-TKRRWNPNIQKKRYWVPSLGRKVTL 63
Query: 93 KVTTHALRCIDKAG 106
+T A++ ID+ G
Sbjct: 64 TLTPKAIKEIDRRG 77
>gi|386773703|ref|ZP_10096081.1| 50S ribosomal protein L28 [Brachybacterium paraconglomeratum LC44]
Length = 78
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R G +FG VS +T R + PNVQ KR F + R +R++V+ LR ID
Sbjct: 2 SQRCQVTGAAPRFGKSVSHSH-RRTSRRFDPNVQTKRFFVPSLGRTVRLRVSARGLRTID 60
Query: 104 KAG 106
+ G
Sbjct: 61 RRG 63
>gi|4808368|emb|CAB42782.1| putative 50S ribosomal protein L28 [Streptomyces coelicolor A3(2)]
Length = 73
Score = 42.7 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 48 LFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
+ G FGNR+S +T R + PN+Q KR + +RH+R++++T +R +D G
Sbjct: 1 MLTGARPGFGNRISHSH-RRTSRRFDPNIQTKRYWLPSENRHVRLRLSTKGIRTVDSIG 58
>gi|343127665|ref|YP_004777596.1| 50S ribosomal protein L28 [Borrelia bissettii DN127]
gi|342222353|gb|AEL18531.1| ribosomal protein L28 [Borrelia bissettii DN127]
Length = 92
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG------------GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
A++ GK FGN V G G KT+R +K N+ K+ F + R +
Sbjct: 2 ARKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPNLGRSVN 61
Query: 92 VKVTTHALRCIDKAGGIDEYLLKT 115
+KV+ +ALR I K G+D +L K
Sbjct: 62 IKVSANALRSISKI-GLDAFLKKN 84
>gi|269215114|ref|ZP_05987771.2| ribosomal protein L28 [Neisseria lactamica ATCC 23970]
gi|288576203|ref|ZP_05978387.2| ribosomal protein L28 [Neisseria mucosa ATCC 25996]
gi|304386501|ref|ZP_07368789.1| 50S ribosomal protein L28 [Neisseria meningitidis ATCC 13091]
gi|419798460|ref|ZP_14323869.1| ribosomal protein L28 [Neisseria sicca VK64]
gi|269208287|gb|EEZ74742.1| ribosomal protein L28 [Neisseria lactamica ATCC 23970]
gi|288566043|gb|EFC87603.1| ribosomal protein L28 [Neisseria mucosa ATCC 25996]
gi|304339330|gb|EFM05402.1| 50S ribosomal protein L28 [Neisseria meningitidis ATCC 13091]
gi|385694604|gb|EIG25196.1| ribosomal protein L28 [Neisseria sicca VK64]
Length = 65
Score = 42.7 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GN VS NKT+R + PN+Q +R + +R +R++V+ ALR IDK G
Sbjct: 3 GNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAALRTIDKVG 51
>gi|406939132|gb|EKD72219.1| ribosomal protein L28 [uncultured bacterium]
Length = 79
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 46 RGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKA 105
+G AG ++ N NKT+R + PN+QE R + R+I+++V+T +R IDK
Sbjct: 10 KGPLAGHNVSHAN-------NKTKRRFNPNLQEHRFWLENEKRYIKLRVSTQGMRIIDKY 62
Query: 106 G 106
G
Sbjct: 63 G 63
>gi|375107101|ref|ZP_09753362.1| ribosomal protein L28 [Burkholderiales bacterium JOSHI_001]
gi|374667832|gb|EHR72617.1| ribosomal protein L28 [Burkholderiales bacterium JOSHI_001]
Length = 77
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN +S NKT+R + PN+ +R + +R +R++V+ ALR IDK GID
Sbjct: 8 TGKGPMVGNNISH-ANNKTKRRFLPNLHYRRFWLETENRWVRLRVSNAALRLIDKV-GID 65
Query: 110 EYL 112
+ +
Sbjct: 66 QVV 68
>gi|441514656|ref|ZP_20996472.1| 50S ribosomal protein L28 [Gordonia amicalis NBRC 100051]
gi|441450567|dbj|GAC54433.1| 50S ribosomal protein L28 [Gordonia amicalis NBRC 100051]
Length = 78
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R G+ FG +VS +T R W PN+Q KR F R+I ++V+T + ID
Sbjct: 2 SRRCQVTGREPGFGKQVSHSH-RRTSRRWDPNIQRKRYFVPSEGRYITLRVSTKGISTID 60
Query: 104 KAGGIDEYLLKT 115
+ G E +L+T
Sbjct: 61 RYG--IESVLRT 70
>gi|387823892|ref|YP_005823363.1| 50S ribosomal protein L28 [Francisella cf. novicida 3523]
gi|328675491|gb|AEB28166.1| LSU ribosomal protein L28p [Francisella cf. novicida 3523]
Length = 78
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
+K + GK GN VS NKTRR + PN+ R + +R+I+++V++ +R ID
Sbjct: 2 SKVCIVTGKRPATGNNVSH-AQNKTRRRFLPNLHTHRFWVESENRYIKLRVSSKGMRIID 60
Query: 104 KAGGIDEYL--LKTPYHKM 120
K GID L L+ HK+
Sbjct: 61 KK-GIDTVLSDLRAQGHKI 78
>gi|171464048|ref|YP_001798161.1| 50S ribosomal protein L28 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|226699144|sp|B1XW20.1|RL28_POLNS RecName: Full=50S ribosomal protein L28
gi|171193586|gb|ACB44547.1| ribosomal protein L28 [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 77
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK GN VS NKT+R + PN+Q +R + +R I +++T LR ID
Sbjct: 2 AKVCQVTGKKPMVGNNVSH-AKNKTKRRFLPNLQNRRFWVESENRWISLRLTNAGLRVID 60
Query: 104 KAGGIDEYL 112
K GID L
Sbjct: 61 K-NGIDAVL 68
>gi|381151156|ref|ZP_09863025.1| ribosomal protein L28 [Methylomicrobium album BG8]
gi|380883128|gb|EIC29005.1| ribosomal protein L28 [Methylomicrobium album BG8]
Length = 78
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GKH GN VS NKT R + PN+Q R + +R +R++++ +R IDK GID
Sbjct: 8 TGKHPVTGNNVSH-ANNKTNRRFLPNLQHHRFWVESENRWVRLRISAKGMRIIDKK-GID 65
Query: 110 EYL 112
L
Sbjct: 66 AVL 68
>gi|194766073|ref|XP_001965149.1| GF23657 [Drosophila ananassae]
gi|190617759|gb|EDV33283.1| GF23657 [Drosophila ananassae]
Length = 301
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
+P I + +G++ G+ + G + + + W PN++ + S+++D ++ V
Sbjct: 72 IPLPLIDTPESHQGIWGGEAVIKGFQKRQQTKRRVPHFWVPNLRRSVVHSHVLDAYMSVV 131
Query: 94 VTTHALRCIDKAGGIDEYLLK 114
VT L I + G D YLLK
Sbjct: 132 VTERTLEQIHECHGFDHYLLK 152
>gi|308459187|ref|XP_003091918.1| hypothetical protein CRE_31545 [Caenorhabditis remanei]
gi|308254815|gb|EFO98767.1| hypothetical protein CRE_31545 [Caenorhabditis remanei]
Length = 358
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 74 PNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKI- 132
P ++ L+S ++D++I+V VT A+R ID+ G+D Y+L++ +D++ K +I
Sbjct: 183 PTLKTAVLYSEVLDKYIKVTVTERAMRLIDEHFGLDYYILQSQEIDLDSKFANSLKREIL 242
Query: 133 -----EKLYE-------ELGQTEVAFFTPEEEAK 154
E YE + Q F PE EA+
Sbjct: 243 LTLATESYYEGDDEKKAYIRQKYAEFVIPEAEAE 276
>gi|170581866|ref|XP_001895873.1| hypothetical protein [Brugia malayi]
gi|158597041|gb|EDP35277.1| conserved hypothetical protein [Brugia malayi]
Length = 593
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNK--TRRNWKPNVQEKRL-----FSYIMDRHIRVKVTT 96
A +GL+ G+ + G S K R+W P+ L +S ++D+H+++ +T
Sbjct: 100 ADKGLWGGETVVKGYIESRPYTRKKILPRHWVPHFFFPSLKKVVAYSEVLDKHMKITMTE 159
Query: 97 HALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
R ID+ G+D YLL+TP + +++G
Sbjct: 160 RTCRLIDQHFGLDLYLLETPEIDIASKLG 188
>gi|30249436|ref|NP_841506.1| 50S ribosomal protein L28 [Nitrosomonas europaea ATCC 19718]
gi|67461512|sp|Q82UL8.1|RL28_NITEU RecName: Full=50S ribosomal protein L28
gi|30138799|emb|CAD85376.1| Ribosomal protein L28 [Nitrosomonas europaea ATCC 19718]
Length = 78
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK G+ VS NKT+R + PN+Q +R + +R IR+++T ALR +DK GID
Sbjct: 8 TGKRPMSGHNVSH-ANNKTKRRFLPNLQSRRFWLESENRWIRLRLTNAALRTVDK-NGID 65
Query: 110 EYL 112
+
Sbjct: 66 SVV 68
>gi|334131068|ref|ZP_08504837.1| 50S ribosomal protein L28 [Methyloversatilis universalis FAM5]
gi|333443897|gb|EGK71855.1| 50S ribosomal protein L28 [Methyloversatilis universalis FAM5]
Length = 66
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GN VS NKT+R + PN+Q++R + +R I ++V+T LR IDK G
Sbjct: 3 GNNVSH-ANNKTKRRFLPNLQQRRFWLESENRFISLRVSTKGLRTIDKKG 51
>gi|379713212|ref|YP_005301550.1| 50S ribosomal protein L28 [Rickettsia massiliae str. AZT80]
gi|376333858|gb|AFB31090.1| 50S ribosomal protein L28 [Rickettsia massiliae str. AZT80]
Length = 97
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G + +GN VS K RR ++PN++ + S I R+ V + ++KAGG
Sbjct: 7 LTGVGVLYGNNVSHSQ-RKIRRRFEPNLRSVKFTSDITAGEYRLSVNARCISSVEKAGGF 65
Query: 109 DEYLLK 114
D Y+LK
Sbjct: 66 DAYILK 71
>gi|254293143|ref|YP_003059166.1| 50S ribosomal protein L28 [Hirschia baltica ATCC 49814]
gi|254041674|gb|ACT58469.1| ribosomal protein L28 [Hirschia baltica ATCC 49814]
Length = 98
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS +T+R + PN+ + L S + + ++++ ALR +DK GG+
Sbjct: 7 LTGKKPITGNNVSHSNL-RTKRRFLPNLVKVSLRSEALGQEFKLRIAASALRTVDKRGGL 65
Query: 109 DEYLLKTPYHKMD 121
D +L K K+
Sbjct: 66 DAFLAKETEEKLS 78
>gi|225023630|ref|ZP_03712822.1| hypothetical protein EIKCOROL_00490 [Eikenella corrodens ATCC
23834]
gi|224943512|gb|EEG24721.1| hypothetical protein EIKCOROL_00490 [Eikenella corrodens ATCC
23834]
Length = 65
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GN VS NKT+R + PN+Q +R + +R +R++V+ ALR IDK G
Sbjct: 3 GNNVSH-ANNKTKRRFLPNLQSRRFWVESENRWVRLRVSNAALRLIDKVG 51
>gi|197260788|gb|ACH56894.1| mitochondrial ribosomal protein L28 [Simulium vittatum]
Length = 282
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
VP + + G++ G+ I G + + W P ++ ++S +++ ++ V
Sbjct: 72 VPIPLLFPKESHEGIWGGEGIVKGFQKRTPYKRRVPHFWVPVLRRSVVYSEVLNEYLSVI 131
Query: 94 VTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKI 132
VT + I + G D YLLKTP + + + L K ++
Sbjct: 132 VTDRTIDLIHECHGFDHYLLKTPACDLRSRLALQIKRRV 170
>gi|410679125|ref|YP_006931527.1| 50S ribosomal protein L28 [Borrelia afzelii HLJ01]
gi|408536513|gb|AFU74644.1| 50S ribosomal protein L28 [Borrelia afzelii HLJ01]
Length = 92
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG------------GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
A++ GK FGN V G G KT+R +K N+ K+ F + R I
Sbjct: 2 ARKCEITGKKTIFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPDLGRSIN 61
Query: 92 VKVTTHALRCIDKAGGIDEYLLKT 115
+KV+ +ALR I K G+D +L K
Sbjct: 62 IKVSANALRSISKI-GLDAFLKKN 84
>gi|337754374|ref|YP_004646885.1| 50S ribosomal protein L28 [Francisella sp. TX077308]
gi|336445979|gb|AEI35285.1| LSU ribosomal protein L28p [Francisella sp. TX077308]
Length = 78
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
+K + GK GN VS NKTRR + PN+ R + +++I++KV++ +R ID
Sbjct: 2 SKVCIVTGKRPATGNNVSH-AQNKTRRRFLPNLHTHRFWVESENKYIKLKVSSKGMRIID 60
Query: 104 KAGGIDEYL--LKTPYHKM 120
K GID L L+ HK+
Sbjct: 61 KK-GIDAVLADLRAQGHKI 78
>gi|386815432|ref|ZP_10102650.1| LSU ribosomal protein L28P [Thiothrix nivea DSM 5205]
gi|386420008|gb|EIJ33843.1| LSU ribosomal protein L28P [Thiothrix nivea DSM 5205]
Length = 78
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+ KR + DR + ++V+T +R IDK GI
Sbjct: 7 VTGKRPITGNNVSH-ANNKTKRRFLPNLHSKRFWVESEDRWVSLRVSTKGMRIIDKK-GI 64
Query: 109 DEYL 112
D L
Sbjct: 65 DTIL 68
>gi|389609051|dbj|BAM18137.1| mitochondrial ribosomal protein L28 [Papilio xuthus]
Length = 282
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 19/123 (15%)
Query: 47 GLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G++ G+ + G + D + W P ++ + S +++ H+ V VT + I+
Sbjct: 87 GIWGGEAVIKGFQKRSDQRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTDRTINLINDHY 146
Query: 107 GIDEYLLKTPYHKMDTEMGLYWKTKI------------------EKLYEELGQTEVAFFT 148
G D YLLKTP + + + L K +I +++Y E +T ++ +T
Sbjct: 147 GFDHYLLKTPACDLVSMLALKLKKQILIELMNGCPRYANNPQKQKEIYNEY-KTYLSSYT 205
Query: 149 PEE 151
PEE
Sbjct: 206 PEE 208
>gi|118595305|ref|ZP_01552652.1| 50S ribosomal protein L28 [Methylophilales bacterium HTCC2181]
gi|118441083|gb|EAV47710.1| 50S ribosomal protein L28 [Methylophilales bacterium HTCC2181]
Length = 78
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS N+TRR + PN+ +R++ +R + +++++ ALR IDK GI
Sbjct: 7 VTGKRPVSGNNVSH-ANNRTRRRFLPNLHNRRIWVETENRWVSMRISSAALRTIDKL-GI 64
Query: 109 DEYLLK 114
D + K
Sbjct: 65 DAVIAK 70
>gi|167626711|ref|YP_001677211.1| 50S ribosomal protein L28 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254875837|ref|ZP_05248547.1| 50S ribosomal protein L28 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|387886041|ref|YP_006316340.1| 50S ribosomal protein L28 [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|189029441|sp|B0U0F9.1|RL28_FRAP2 RecName: Full=50S ribosomal protein L28
gi|167596712|gb|ABZ86710.1| 50S ribosomal protein L28 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254841858|gb|EET20272.1| 50S ribosomal protein L28 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|386870857|gb|AFJ42864.1| 50S ribosomal protein L28 [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 78
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
+K + GK GN VS NKTRR + PN+ R + +++I++KV++ +R ID
Sbjct: 2 SKVCIVTGKRPATGNNVSH-AQNKTRRRFLPNLHTHRFWVESENKYIKLKVSSKGMRIID 60
Query: 104 KAGGIDEYL--LKTPYHKM 120
K GID L L+ HK+
Sbjct: 61 KK-GIDTVLSDLRAQGHKI 78
>gi|193669062|ref|XP_001942935.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like
[Acyrthosiphon pisum]
Length = 266
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 47 GLFAGKHIQFGNRVSEDGGNKTRRN----WKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
G++ G+ + G + GNK + W P +++ ++S I++ ++ VT AL I
Sbjct: 84 GIWGGEAVVQGFK---QNGNKYKSRVPHFWTPTLKKSVVYSEILNEYMSTTVTEKALDLI 140
Query: 103 DKAGGIDEYLLKTPYHKMDTEMGL 126
+K G+D YLLKT + T + L
Sbjct: 141 NKNYGLDHYLLKTAACDLRTTLSL 164
>gi|198284382|ref|YP_002220703.1| 50S ribosomal protein L28 [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218667456|ref|YP_002427047.1| 50S ribosomal protein L28 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|416001574|ref|ZP_11560764.1| 50S ribosomal protein L28 [Acidithiobacillus sp. GGI-221]
gi|226738018|sp|B7J7Y4.1|RL28_ACIF2 RecName: Full=50S ribosomal protein L28
gi|226738019|sp|B5ENA7.1|RL28_ACIF5 RecName: Full=50S ribosomal protein L28
gi|198248903|gb|ACH84496.1| ribosomal protein L28 [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218519669|gb|ACK80255.1| ribosomal protein L28 [Acidithiobacillus ferrooxidans ATCC 23270]
gi|339836041|gb|EGQ63665.1| 50S ribosomal protein L28 [Acidithiobacillus sp. GGI-221]
Length = 78
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKTRR + PN+Q R + +R +R++V+T +R IDK GID
Sbjct: 8 TGKKPMAGNNVSH-AHNKTRRRFLPNLQYHRFWVESENRWVRMRVSTKGIRTIDKK-GID 65
Query: 110 EYL 112
L
Sbjct: 66 VVL 68
>gi|289770857|ref|ZP_06530235.1| 50S ribosomal protein L28 [Streptomyces lividans TK24]
gi|289701056|gb|EFD68485.1| 50S ribosomal protein L28 [Streptomyces lividans TK24]
Length = 78
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 48 LFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
+ G FGNR+S +T R + PN+Q +R + +RH+R++++T +R +D G
Sbjct: 6 MLTGARPGFGNRISHSH-RRTSRRFDPNIQTRRYWLPSENRHVRLRLSTKGIRTVDSIG 63
>gi|71082914|ref|YP_265633.1| 50S ribosomal protein L28 [Candidatus Pelagibacter ubique HTCC1062]
gi|91762663|ref|ZP_01264628.1| 50S ribosomal protein L28 [Candidatus Pelagibacter ubique HTCC1002]
gi|71062027|gb|AAZ21030.1| 50S ribosomal protein L28 [Candidatus Pelagibacter ubique HTCC1062]
gi|91718465|gb|EAS85115.1| 50S ribosomal protein L28 [Candidatus Pelagibacter ubique HTCC1002]
Length = 107
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
+K+ GK G+ VS NKT+R + PN+++ + S ++ R + + V+ +R +D
Sbjct: 2 SKKCELTGKIPMKGHNVSH-ANNKTKRRFLPNLKKAKFTSELLKRSLTLTVSNAGVRSVD 60
Query: 104 KAGGIDEYL 112
K G D++L
Sbjct: 61 KKGTFDQFL 69
>gi|239790943|dbj|BAH72000.1| ACYPI007188 [Acyrthosiphon pisum]
Length = 266
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 47 GLFAGKHIQFGNRVSEDGGNKTRRN----WKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
G++ G+ + G + GNK + W P +++ ++S I++ ++ VT AL I
Sbjct: 84 GIWGGEAVVQGFK---QNGNKYKSRVPHFWTPTLKKSVVYSEILNEYMSTTVTEKALDLI 140
Query: 103 DKAGGIDEYLLKTPYHKMDTEMGL 126
+K G+D YLLKT + T + L
Sbjct: 141 NKNYGLDHYLLKTAACDLRTTLSL 164
>gi|407788930|ref|ZP_11136033.1| 50S ribosomal protein L28 [Gallaecimonas xiamenensis 3-C-1]
gi|407207522|gb|EKE77458.1| 50S ribosomal protein L28 [Gallaecimonas xiamenensis 3-C-1]
Length = 78
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKTRR + PN+Q R + +R ++++++T +R IDK GID
Sbjct: 8 TGKGPVVGNNVSH-ANNKTRRRFLPNLQTHRFWVASENRFVKLRLSTKGMRIIDKK-GID 65
Query: 110 EYL 112
L
Sbjct: 66 AVL 68
>gi|383486004|ref|YP_005394916.1| 50S ribosomal protein L28 [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|386321318|ref|YP_006017480.1| 50S ribosomal protein L28 [Riemerella anatipestifer RA-GD]
gi|407451445|ref|YP_006723169.1| 50S ribosomal protein L28 [Riemerella anatipestifer RA-CH-1]
gi|442314091|ref|YP_007355394.1| Ribosomal protein L28 [Riemerella anatipestifer RA-CH-2]
gi|325335861|gb|ADZ12135.1| Ribosomal protein L28 [Riemerella anatipestifer RA-GD]
gi|380460689|gb|AFD56373.1| LSU ribosomal protein l28p [Riemerella anatipestifer ATCC 11845 =
DSM 15868]
gi|403312430|gb|AFR35271.1| Ribosomal protein L28 [Riemerella anatipestifer RA-CH-1]
gi|441483014|gb|AGC39700.1| Ribosomal protein L28 [Riemerella anatipestifer RA-CH-2]
Length = 66
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GN VS NKT+R ++ N+ EK+ + ++HI +KV+ H LR I+K G
Sbjct: 3 GNHVSH-ANNKTKRRFEINLLEKKFYLPEQEKHITLKVSAHGLRVINKIG 51
>gi|402575109|ref|YP_006608001.1| 50S ribosomal protein L28 [Candidatus Portiera aleyrodidarum
BT-B-HRs]
gi|407453124|ref|YP_006732443.1| 50S ribosomal protein L28 [Candidatus Portiera aleyrodidarum
BT-QVLC]
gi|407681458|ref|YP_006796634.1| 50S ribosomal protein L28 [Candidatus Portiera aleyrodidarum
BT-QVLC]
gi|407681740|ref|YP_006796915.1| LSU ribosomal protein L28p [Candidatus Portiera aleyrodidarum
BT-B-HRs]
gi|32423706|gb|AAP81249.1| ribosomal protein L28 [Candidatus Portiera aleyrodidarum]
gi|401871913|gb|AFQ24081.1| LSU ribosomal protein L28P [Candidatus Portiera aleyrodidarum
BT-B-HRs]
gi|405779841|gb|AFS18844.1| 50S ribosomal protein L28 [Candidatus Portiera aleyrodidarum
BT-QVLC]
gi|407243069|gb|AFT80470.1| LSU ribosomal protein L28p [Candidatus Portiera aleyrodidarum
BT-QVLC]
gi|407243351|gb|AFT80751.1| LSU ribosomal protein L28p [Candidatus Portiera aleyrodidarum
BT-B-HRs]
Length = 71
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKT 115
GN VS KTRR + PN+Q+ R + R+I++ +TT +R IDK GI++ L+KT
Sbjct: 15 GNNVSHSH-RKTRRRFMPNLQKHRFWIKKEKRYIKMHITTKGMRIIDKY-GIEKVLIKT 71
>gi|343085345|ref|YP_004774640.1| 50S ribosomal protein L28 [Cyclobacterium marinum DSM 745]
gi|342353879|gb|AEL26409.1| 50S ribosomal protein L28 [Cyclobacterium marinum DSM 745]
Length = 80
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK Q GN VS NKT+R + PN+ +K + D I +KV++ ALR I+K G
Sbjct: 7 ITGKRPQVGNNVSH-ANNKTKRRFYPNLHKKSFYIPEEDAWITLKVSSSALRTINKKG 63
>gi|114330794|ref|YP_747016.1| 50S ribosomal protein L28 [Nitrosomonas eutropha C91]
gi|122314268|sp|Q0AHY1.1|RL28_NITEC RecName: Full=50S ribosomal protein L28
gi|114307808|gb|ABI59051.1| LSU ribosomal protein L28P [Nitrosomonas eutropha C91]
Length = 78
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK G+ VS NKT+R + PN+Q +R + +R IR+++T ALR IDK GID
Sbjct: 8 TGKRPMSGHHVSH-ANNKTKRRFLPNLQSRRFWLESENRWIRLRLTNAALRTIDK-NGID 65
Query: 110 EYL 112
+
Sbjct: 66 VVI 68
>gi|260220651|emb|CBA28404.1| 50S ribosomal protein L28 [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 93
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN VS NKT+R + PN+Q +R + +R +R++++ LR IDK GID
Sbjct: 25 GKGPMVGNNVSH-ANNKTKRRFLPNLQYRRFWVESENRWVRLRISNAGLRLIDK-NGIDS 82
Query: 111 YL 112
L
Sbjct: 83 VL 84
>gi|406940625|gb|EKD73332.1| ribosomal protein L28 [uncultured bacterium]
Length = 77
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK G+ VS NKT+R + PN+QE R + R+++++V+T +R IDK G
Sbjct: 8 TGKRPLVGHNVSH-ANNKTKRRFNPNLQEHRFWLESEKRYVKLRVSTKGMRIIDKYG 63
>gi|224824522|ref|ZP_03697629.1| ribosomal protein L28 [Pseudogulbenkiania ferrooxidans 2002]
gi|347538756|ref|YP_004846180.1| 50S ribosomal protein L28 [Pseudogulbenkiania sp. NH8B]
gi|224603015|gb|EEG09191.1| ribosomal protein L28 [Pseudogulbenkiania ferrooxidans 2002]
gi|345641933|dbj|BAK75766.1| ribosomal protein L28 [Pseudogulbenkiania sp. NH8B]
Length = 77
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + PN+Q ++ + +R +R++V+ ALR IDK G
Sbjct: 8 TGKRPMTGNNVSH-ANNKTKRRFLPNLQYRKFWVESENRWVRLRVSNAALRTIDKLG 63
>gi|389614693|dbj|BAM20374.1| mitochondrial ribosomal protein L28 [Papilio polytes]
Length = 282
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 19/123 (15%)
Query: 47 GLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G++ G+ + G + + + W P ++ + S +++ H+ V VT + I+
Sbjct: 87 GIWGGEAVIKGFQKRSEQRRRVPHYWVPVLKRTVVRSEVLNTHLSVTVTDRTINLINDHY 146
Query: 107 GIDEYLLKTPYHKMDTEMGLYWKTKI------------------EKLYEELGQTEVAFFT 148
G D YLLKTP + + + L K +I +++YEE +T ++ +T
Sbjct: 147 GFDHYLLKTPACDLVSMLALKLKKQILIELMNGCPRHANNPQKQKEIYEEY-KTYLSSYT 205
Query: 149 PEE 151
PEE
Sbjct: 206 PEE 208
>gi|345871363|ref|ZP_08823309.1| 50S ribosomal protein L28 [Thiorhodococcus drewsii AZ1]
gi|343920526|gb|EGV31257.1| 50S ribosomal protein L28 [Thiorhodococcus drewsii AZ1]
Length = 78
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKT+R + PN+ EKR + R ++++++T +R IDK GID
Sbjct: 8 TGKRPLTGNNVSH-ANNKTKRRFLPNLHEKRFWVEAEKRWVKLRLSTKGMRIIDK-NGID 65
Query: 110 EYL 112
L
Sbjct: 66 AVL 68
>gi|332375775|gb|AEE63028.1| unknown [Dendroctonus ponderosae]
Length = 284
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%)
Query: 46 RGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKA 105
+ ++ G+ + G ++ + + W P ++ + S ++D++ V VT + I+
Sbjct: 84 KHMWGGEAVVQGFQIKDRYSRRVPHFWVPVLKRSVVHSEVLDKYFSVIVTERTISLINSN 143
Query: 106 GGIDEYLLKTPYHKMDTEMGLYWKTKI 132
G D YLLKTP + + + L K KI
Sbjct: 144 YGFDHYLLKTPACDLHSLLPLGLKRKI 170
>gi|444921029|ref|ZP_21240867.1| 50S ribosomal protein L28 [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507765|gb|ELV07939.1| 50S ribosomal protein L28 [Wohlfahrtiimonas chitiniclastica SH04]
Length = 78
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKTRR + PN+ R++ R + ++VT+ LR IDK GI
Sbjct: 7 VTGKAPAVGNNVSH-ANNKTRRRFLPNLHSHRIWVESEQRFVTLRVTSAGLRTIDKK-GI 64
Query: 109 DEYL 112
D L
Sbjct: 65 DAVL 68
>gi|421736984|ref|ZP_16175696.1| 50S ribosomal protein L28 [Bifidobacterium bifidum IPLA 20015]
gi|407295731|gb|EKF15401.1| 50S ribosomal protein L28 [Bifidobacterium bifidum IPLA 20015]
Length = 115
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 39 IVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHA 98
I+ + +K+ G GNRVS KTRR + PN+Q KR + + RH+ + V+
Sbjct: 14 ILASMSKQCQILGTRASTGNRVSH-SHRKTRRRFNPNLQTKRYWVPSLGRHVTLTVSVKG 72
Query: 99 LRCIDKAG 106
++ ID+ G
Sbjct: 73 MKTIDRIG 80
>gi|344198792|ref|YP_004783118.1| 50S ribosomal protein L28 [Acidithiobacillus ferrivorans SS3]
gi|343774236|gb|AEM46792.1| 50S ribosomal protein L28 [Acidithiobacillus ferrivorans SS3]
Length = 92
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKTRR + PN+Q R + R +R++V+T +R IDK GID
Sbjct: 22 TGKKPMAGNNVSH-AHNKTRRRFLPNLQYHRFWVESETRWVRMRVSTKGIRTIDKK-GID 79
Query: 110 EYL 112
L
Sbjct: 80 VVL 82
>gi|171057442|ref|YP_001789791.1| 50S ribosomal protein L28 [Leptothrix cholodnii SP-6]
gi|226732833|sp|B1Y149.1|RL28_LEPCP RecName: Full=50S ribosomal protein L28
gi|170774887|gb|ACB33026.1| ribosomal protein L28 [Leptothrix cholodnii SP-6]
Length = 77
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + PN+ +R + +R +R++++ ALR IDK G
Sbjct: 8 TGKGPMVGNNVSH-ANNKTKRRFLPNLHYRRFWLETENRWVRLRISNAALRLIDKVG 63
>gi|310287798|ref|YP_003939056.1| 50S ribosomal protein L28 [Bifidobacterium bifidum S17]
gi|421733441|ref|ZP_16172547.1| 50S ribosomal protein L28 [Bifidobacterium bifidum LMG 13195]
gi|309251734|gb|ADO53482.1| ribosomal protein L28 [Bifidobacterium bifidum S17]
gi|407078683|gb|EKE51483.1| 50S ribosomal protein L28 [Bifidobacterium bifidum LMG 13195]
Length = 115
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 39 IVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHA 98
I+ + +K+ G GNRVS KTRR + PN+Q KR + + RH+ + V+
Sbjct: 14 ILASMSKQCQILGTRASTGNRVSH-SHRKTRRRFNPNLQTKRYWVPSLGRHVTLTVSVKG 72
Query: 99 LRCIDKAG 106
++ ID+ G
Sbjct: 73 MKTIDRIG 80
>gi|398336976|ref|ZP_10521681.1| endonuclease III-like protein [Leptospira kmetyi serovar Malaysia
str. Bejo-Iso9]
Length = 309
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK GN VS KTRR WK N+ +KR+F +R + V+++T ALR +
Sbjct: 2 ARRCEVTGKGTVSGNNVSHSH-IKTRRTWKVNLIKKRIFLEDENRWVTVRLSTRALRTLR 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|297620946|ref|YP_003709083.1| 50S ribosomal protein L28 [Waddlia chondrophila WSU 86-1044]
gi|297376247|gb|ADI38077.1| 50S ribosomal protein L28 [Waddlia chondrophila WSU 86-1044]
gi|337293232|emb|CCB91223.1| 50S ribosomal protein L28 [Waddlia chondrophila 2032/99]
Length = 90
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 67 KTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
KTRR +KPN+ EK+L+ R I +K++T ALR IDK G
Sbjct: 36 KTRRTFKPNIIEKKLWFPEEKRFITLKLSTSALRTIDKVG 75
>gi|126725204|ref|ZP_01741047.1| 50S ribosomal protein L28 [Rhodobacterales bacterium HTCC2150]
gi|126706368|gb|EBA05458.1| 50S ribosomal protein L28 [Rhodobacteraceae bacterium HTCC2150]
Length = 99
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS N+TRR + PN+ L S + +++++ ALR +D GG+
Sbjct: 10 LTGKGPMSGNNVSH-AKNRTRRRFLPNLNAITLQSDATGQSYQLRISAAALRTVDHRGGL 68
Query: 109 DEYLLKTPYHKMDTEM 124
D ++ K DTE+
Sbjct: 69 DAFMAKAK----DTEL 80
>gi|407717172|ref|YP_006838452.1| 50S ribosomal protein L28 [Cycloclasticus sp. P1]
gi|407257508|gb|AFT67949.1| 50S ribosomal protein L28 [Cycloclasticus sp. P1]
Length = 78
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS N+TRR ++PN+ R + +R +R++V+ + +R IDK GID
Sbjct: 8 TGKRPMSGNNVSH-AKNRTRRRFEPNLHHHRFWVESENRFVRLRVSANGMRTIDK-NGID 65
Query: 110 EYL 112
L
Sbjct: 66 AIL 68
>gi|195941297|ref|ZP_03086679.1| 50S ribosomal protein L28 [Borrelia burgdorferi 80a]
Length = 92
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 13/83 (15%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG------------GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
A++ GK FGN V G G KT+R +K N+ K+ F + R +
Sbjct: 2 ARKCEITGKKTMFGNNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPNLGRSVS 61
Query: 92 VKVTTHALRCIDKAGGIDEYLLK 114
++V+ +ALR I K G+D +L K
Sbjct: 62 IRVSANALRSISKI-GLDTFLKK 83
>gi|319953947|ref|YP_004165214.1| 50S ribosomal protein L28 [Cellulophaga algicola DSM 14237]
gi|319422607|gb|ADV49716.1| LSU ribosomal protein L28P [Cellulophaga algicola DSM 14237]
Length = 78
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK FGN VS NKTRR + N+ +KR + DR + +KV+ AL+ I+K G
Sbjct: 7 ITGKRAMFGNNVSFSI-NKTRRRFNVNLSKKRFYIEEEDRWVTLKVSARALKSINKKG 63
>gi|429742631|ref|ZP_19276251.1| ribosomal protein L28 [Neisseria sp. oral taxon 020 str. F0370]
gi|429167957|gb|EKY09826.1| ribosomal protein L28 [Neisseria sp. oral taxon 020 str. F0370]
Length = 65
Score = 41.6 bits (96), Expect = 0.23, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GN VS NKT+R + PN+Q +R + +R +R++V+ ALR IDK G
Sbjct: 3 GNNVSH-ANNKTKRRFLPNLQTRRFWVESENRWVRLRVSNAALRTIDKLG 51
>gi|115372990|ref|ZP_01460294.1| ribosomal protein L28 [Stigmatella aurantiaca DW4/3-1]
gi|310818660|ref|YP_003951018.1| 50S ribosomal protein L28 [Stigmatella aurantiaca DW4/3-1]
gi|115370068|gb|EAU68999.1| ribosomal protein L28 [Stigmatella aurantiaca DW4/3-1]
gi|309391732|gb|ADO69191.1| 50S ribosomal protein L28 [Stigmatella aurantiaca DW4/3-1]
Length = 78
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R PN+Q KR + +R +R++V+ H +R I+K G
Sbjct: 7 VTGKRPLVGNNVSHSN-NKTKRRSLPNLQWKRFWVEKENRFVRLRVSAHGIRIINKQG 63
>gi|406942270|gb|EKD74545.1| 50S ribosomal protein L28 [uncultured bacterium]
Length = 89
Score = 41.6 bits (96), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKT+R + PN++ +R+++ ++ +++TT L+ IDK G
Sbjct: 8 TGKKPLVGNNVSH-ANNKTKRRYFPNLKTQRIYNPTTQKYETLRLTTRGLKTIDKYG--I 64
Query: 110 EYLLK 114
EY+LK
Sbjct: 65 EYVLK 69
>gi|149174630|ref|ZP_01853256.1| Two Component Transcriptional Regulator, LuxR family protein
[Planctomyces maris DSM 8797]
gi|148846740|gb|EDL61077.1| Two Component Transcriptional Regulator, LuxR family protein
[Planctomyces maris DSM 8797]
Length = 192
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 134 KLYEELGQTEVAFFTPEEEAKLEQDFKDMKL-AQRAARRELRRQMYGGSSKQKQI--EQG 190
KL +ELG +++ F P ++++L+Q+ DM L R+ +RE +Y + K +Q E
Sbjct: 105 KLAKELGFSKI-MFKPLDQSELKQELNDMSLNVFRSTQRETPLDLYSPTQKVRQSVREIV 163
Query: 191 SADTQETAEEAAKILSEGIPN 211
AD +E A E KIL E I N
Sbjct: 164 EADNKEAASEFLKILLEEIAN 184
>gi|335044147|ref|ZP_08537172.1| ribosomal protein L28 [Methylophaga aminisulfidivorans MP]
gi|333787393|gb|EGL53277.1| ribosomal protein L28 [Methylophaga aminisulfidivorans MP]
Length = 78
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKT+R + PN+ R + +R ++++V+ H LR IDK GID
Sbjct: 8 TGKRPMSGNNVSH-AHNKTKRRFLPNLHSHRFWVESENRWVKLRVSNHGLRIIDKR-GID 65
Query: 110 EYL 112
L
Sbjct: 66 SVL 68
>gi|339483996|ref|YP_004695782.1| 50S ribosomal protein L28 [Nitrosomonas sp. Is79A3]
gi|338806141|gb|AEJ02383.1| 50S ribosomal protein L28 [Nitrosomonas sp. Is79A3]
Length = 78
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q ++ + +R I ++++ ALR IDK GI
Sbjct: 7 VTGKKPMSGNNVSH-ANNKTKRRFLPNLQRRKFWVESENRWINLRLSNAALRTIDK-NGI 64
Query: 109 DEYLLK 114
D + K
Sbjct: 65 DAVIAK 70
>gi|389703201|ref|ZP_10185495.1| 50S ribosomal protein L28 [Acinetobacter sp. HA]
gi|388611604|gb|EIM40704.1| 50S ribosomal protein L28 [Acinetobacter sp. HA]
Length = 78
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R ++PN+ + R + R +R+++TT +R IDK G
Sbjct: 8 TGKRPVVGNNVSH-ANNKTKRRFEPNLHQHRFWLESEKRFVRLRLTTKGMRIIDKLG 63
>gi|333902473|ref|YP_004476346.1| 50S ribosomal protein L28 [Pseudomonas fulva 12-X]
gi|333117738|gb|AEF24252.1| 50S ribosomal protein L28 [Pseudomonas fulva 12-X]
Length = 78
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN +S NKTRR + PN+Q R + +R +R++++T +R IDK GID
Sbjct: 8 TGKGPVTGNNISH-ANNKTRRRFLPNLQHHRFWVESENRFVRLRLSTKGMRIIDKR-GID 65
Query: 110 EYL 112
L
Sbjct: 66 VVL 68
>gi|386827999|ref|ZP_10115106.1| ribosomal protein L28 [Beggiatoa alba B18LD]
gi|386428883|gb|EIJ42711.1| ribosomal protein L28 [Beggiatoa alba B18LD]
Length = 78
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN+VS NK+RR + PN+ R + +R +R+++T++A+R IDK GID
Sbjct: 8 TGKRPISGNKVSH-ANNKSRRRFLPNLHIHRFWVASENRWVRLRLTSNAMRTIDKQ-GID 65
Query: 110 EYL 112
L
Sbjct: 66 VVL 68
>gi|326929290|ref|XP_003210800.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Meleagris
gallopavo]
Length = 181
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 79 KRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGL 126
++ +S I+D + + VT L ID+A G D Y+LKTP M +++G+
Sbjct: 42 RQFYSEILDAKLTITVTMRTLDLIDQAYGFDFYILKTPKADMCSKLGM 89
>gi|430375847|ref|ZP_19430250.1| 50S ribosomal protein L28 [Moraxella macacae 0408225]
gi|429541078|gb|ELA09106.1| 50S ribosomal protein L28 [Moraxella macacae 0408225]
Length = 78
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKTRR + PN+ R + +R +R+++++ +R +DK GID
Sbjct: 8 TGKRPLVGNNVSH-ANNKTRRRFLPNLHNHRFWVESENRFVRLRLSSKGMRIVDKL-GID 65
Query: 110 EYL 112
+ L
Sbjct: 66 QVL 68
>gi|305667749|ref|YP_003864036.1| 50S ribosomal protein L28 [Maribacter sp. HTCC2170]
gi|88707586|gb|EAQ99828.1| 50S ribosomal protein L28 [Maribacter sp. HTCC2170]
Length = 78
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK FGN VS NKTRR + N+ +KR + DR + +KV+ AL+ I+K G
Sbjct: 7 ITGKRAMFGNNVSFSI-NKTRRRFNVNLSKKRFYIPEEDRWVTLKVSAKALKSINKKG 63
>gi|90408983|ref|ZP_01217114.1| ribosomal protein L28, partial [Psychromonas sp. CNPT3]
gi|90309897|gb|EAS38051.1| ribosomal protein L28 [Psychromonas sp. CNPT3]
Length = 73
Score = 41.2 bits (95), Expect = 0.28, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS N+TRR + PN+Q R + +R +++++TT +R IDK G
Sbjct: 9 GKRPATGNNVSH-AKNRTRRRFLPNLQSHRFWVESENRFVKLRLTTKGMRIIDKKG 63
>gi|390941880|ref|YP_006405641.1| 50S ribosomal protein L28 [Belliella baltica DSM 15883]
gi|390415308|gb|AFL82886.1| LSU ribosomal protein L28P [Belliella baltica DSM 15883]
Length = 80
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK Q GN VS NKT+R + PN+ +K + D I +KV + ALR I+
Sbjct: 2 AKVCDITGKRPQVGNNVSH-ANNKTKRKFLPNLHKKSFYVPEEDAWITLKVCSKALRTIN 60
Query: 104 KAG 106
K G
Sbjct: 61 KNG 63
>gi|284041382|ref|YP_003391312.1| 50S ribosomal protein L28 [Spirosoma linguale DSM 74]
gi|283820675|gb|ADB42513.1| ribosomal protein L28 [Spirosoma linguale DSM 74]
Length = 79
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK + GN VS NKT+R + PN+Q+KR F + ++V T A++ I+K G
Sbjct: 7 ITGKRTRTGNNVSH-ANNKTKRKFFPNLQKKRFFVESTGEWVTLRVATSAIKTINKNG 63
>gi|104784326|ref|YP_610824.1| 50S ribosomal protein L28 [Pseudomonas entomophila L48]
gi|398844728|ref|ZP_10601784.1| ribosomal protein L28 [Pseudomonas sp. GM84]
gi|122401257|sp|Q1I2U5.1|RL28_PSEE4 RecName: Full=50S ribosomal protein L28
gi|95113313|emb|CAK18041.1| 50S ribosomal protein L28 [Pseudomonas entomophila L48]
gi|398254227|gb|EJN39328.1| ribosomal protein L28 [Pseudomonas sp. GM84]
Length = 78
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN +S NKTRR + PN+Q R + +R +R++V+ +R IDK GID
Sbjct: 8 TGKGPVTGNNISH-ANNKTRRRFLPNLQHHRFWVESENRFVRLRVSAKGMRIIDKR-GID 65
Query: 110 EYLL 113
L+
Sbjct: 66 AVLV 69
>gi|387128663|ref|YP_006297268.1| 50S ribosomal protein L28 [Methylophaga sp. JAM1]
gi|386275725|gb|AFI85623.1| LSU ribosomal protein L28p [Methylophaga sp. JAM1]
Length = 78
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKT+R + PN+ R + +R ++++V+ H LR IDK GID
Sbjct: 8 TGKRPMSGNNVSH-AHNKTKRRFLPNLHSHRFWVESENRWVKLRVSNHGLRIIDKR-GID 65
Query: 110 EYL 112
L
Sbjct: 66 TVL 68
>gi|319941938|ref|ZP_08016259.1| ribosomal protein L28 [Sutterella wadsworthensis 3_1_45B]
gi|319804591|gb|EFW01461.1| ribosomal protein L28 [Sutterella wadsworthensis 3_1_45B]
Length = 77
Score = 41.2 bits (95), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK G++VS NKT+R + PN+Q +R + +R +R+++T LR +DK GID
Sbjct: 9 GKAPMVGHQVSH-ANNKTKRRFMPNLQYRRFWVESENRWVRLRLTNAGLRTVDKL-GIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|451822890|ref|YP_007459164.1| large subunit ribosomal protein L28 [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
gi|451775690|gb|AGF46731.1| large subunit ribosomal protein L28 [Candidatus
Kinetoplastibacterium desouzaii TCC079E]
Length = 78
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + PN+Q + + +R +R+KV+ ALR IDK GI
Sbjct: 7 ITGKGPMVGNNVSH-ANNKTKRRFLPNLQLHKFWLEKENRWVRLKVSAKALRTIDK-NGI 64
Query: 109 DEYL 112
+ L
Sbjct: 65 ESVL 68
>gi|56708623|ref|YP_170519.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|89255929|ref|YP_513291.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica
LVS]
gi|110671094|ref|YP_667651.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
FSC198]
gi|115314411|ref|YP_763134.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica
OSU18]
gi|118496943|ref|YP_897993.1| 50S ribosomal protein L28 [Francisella novicida U112]
gi|134301431|ref|YP_001121399.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156501918|ref|YP_001427983.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|187931156|ref|YP_001891140.1| 50S ribosomal protein L28 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|194324171|ref|ZP_03057945.1| ribosomal protein L28 [Francisella novicida FTE]
gi|208780396|ref|ZP_03247737.1| ribosomal protein L28 [Francisella novicida FTG]
gi|254367287|ref|ZP_04983314.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica
257]
gi|254368763|ref|ZP_04984776.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica
FSC022]
gi|254371256|ref|ZP_04987258.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
FSC033]
gi|254372313|ref|ZP_04987804.1| 50S ribosomal protein L28 [Francisella tularensis subsp. novicida
GA99-3549]
gi|254373787|ref|ZP_04989270.1| ribosomal protein L28 [Francisella novicida GA99-3548]
gi|254875487|ref|ZP_05248197.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
MA00-2987]
gi|290953710|ref|ZP_06558331.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica
URFT1]
gi|379717850|ref|YP_005306186.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
TIGB03]
gi|379726453|ref|YP_005318639.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
TI0902]
gi|385792269|ref|YP_005825245.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|385795325|ref|YP_005831731.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
NE061598]
gi|421751177|ref|ZP_16188233.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
AS_713]
gi|421753033|ref|ZP_16190039.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
831]
gi|421756268|ref|ZP_16193189.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
80700075]
gi|421756765|ref|ZP_16193662.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
80700103]
gi|421758633|ref|ZP_16195476.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
70102010]
gi|422938384|ref|YP_007011531.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica
FSC200]
gi|423050259|ref|YP_007008693.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica
F92]
gi|424673901|ref|ZP_18110829.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
70001275]
gi|67461296|sp|Q5NEM3.1|RL28_FRATT RecName: Full=50S ribosomal protein L28
gi|122325562|sp|Q0BN37.1|RL28_FRATO RecName: Full=50S ribosomal protein L28
gi|122501078|sp|Q2A4R1.1|RL28_FRATH RecName: Full=50S ribosomal protein L28
gi|123063365|sp|Q14G26.1|RL28_FRAT1 RecName: Full=50S ribosomal protein L28
gi|166226572|sp|A7NAM4.1|RL28_FRATF RecName: Full=50S ribosomal protein L28
gi|166226573|sp|A0Q4S4.1|RL28_FRATN RecName: Full=50S ribosomal protein L28
gi|166226574|sp|A4IWH7.1|RL28_FRATW RecName: Full=50S ribosomal protein L28
gi|226694923|sp|B2SFK9.1|RL28_FRATM RecName: Full=50S ribosomal protein L28
gi|56605115|emb|CAG46236.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|89143760|emb|CAJ78962.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica
LVS]
gi|110321427|emb|CAL09619.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
FSC198]
gi|115129310|gb|ABI82497.1| ribosomal protein L28 [Francisella tularensis subsp. holarctica
OSU18]
gi|118422849|gb|ABK89239.1| 50S ribosomal protein L28 [Francisella novicida U112]
gi|134049208|gb|ABO46279.1| ribosomal protein L28 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|134253104|gb|EBA52198.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica
257]
gi|151569496|gb|EDN35150.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
FSC033]
gi|151570042|gb|EDN35696.1| 50S ribosomal protein L28 [Francisella novicida GA99-3549]
gi|151571508|gb|EDN37162.1| ribosomal protein L28 [Francisella novicida GA99-3548]
gi|156252521|gb|ABU61027.1| ribosomal protein L28 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|157121684|gb|EDO65854.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica
FSC022]
gi|187712065|gb|ACD30362.1| 50S ribosomal protein L28 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|194321618|gb|EDX19102.1| ribosomal protein L28 [Francisella tularensis subsp. novicida FTE]
gi|208743764|gb|EDZ90067.1| ribosomal protein L28 [Francisella novicida FTG]
gi|254841486|gb|EET19922.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282159860|gb|ADA79251.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
NE061598]
gi|328676415|gb|AEB27285.1| LSU ribosomal protein L28p [Francisella cf. novicida Fx1]
gi|377827902|gb|AFB81150.1| LSU ribosomal protein L28p [Francisella tularensis subsp.
tularensis TI0902]
gi|377829527|gb|AFB79606.1| LSU ribosomal protein L28p [Francisella tularensis subsp.
tularensis TIGB03]
gi|407293535|gb|AFT92441.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica
FSC200]
gi|409085156|gb|EKM85306.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
80700075]
gi|409088483|gb|EKM88551.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
831]
gi|409088704|gb|EKM88765.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
AS_713]
gi|409091912|gb|EKM91896.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
70102010]
gi|409093258|gb|EKM93210.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
80700103]
gi|417435444|gb|EKT90345.1| 50S ribosomal protein L28 [Francisella tularensis subsp. tularensis
70001275]
gi|421950981|gb|AFX70230.1| 50S ribosomal protein L28 [Francisella tularensis subsp. holarctica
F92]
Length = 78
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
+K + GK GN VS NKT+R + PN+ R + +R+I+++V++ +R ID
Sbjct: 2 SKVCIVTGKRPATGNNVSH-AQNKTKRRFLPNLHAHRFWVESENRYIKLRVSSKGMRIID 60
Query: 104 KAGGIDEYL--LKTPYHKM 120
K GID L L+ HK+
Sbjct: 61 KK-GIDTVLSDLRAQGHKI 78
>gi|348589903|ref|YP_004874365.1| 50S ribosomal protein L28p [Taylorella asinigenitalis MCE3]
gi|347973807|gb|AEP36342.1| LSU ribosomal protein L28p [Taylorella asinigenitalis MCE3]
Length = 66
Score = 41.2 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GN VS NKT+R + PN+Q R + +R +R++++++ALR IDK G
Sbjct: 3 GNNVSH-AHNKTKRRFLPNLQTHRFWVESENRWVRLRISSNALRTIDKKG 51
>gi|343928748|ref|ZP_08768193.1| 50S ribosomal protein L28 [Gordonia alkanivorans NBRC 16433]
gi|343761497|dbj|GAA15119.1| 50S ribosomal protein L28 [Gordonia alkanivorans NBRC 16433]
Length = 88
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 39 IVMNR----AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKV 94
I++N+ ++R G+ FG +VS +T R W PN+Q KR F R+I ++V
Sbjct: 3 IIVNKEDGMSRRCQVTGREPGFGKQVSHSH-RRTSRRWDPNIQRKRYFVPSEGRYITLRV 61
Query: 95 TTHALRCIDKAGGIDEYLLKT 115
+ + ID+ G E +L+T
Sbjct: 62 SAKGISTIDRYG--IESVLRT 80
>gi|340616604|ref|YP_004735057.1| 50S ribosomal protein L28 [Zobellia galactanivorans]
gi|339731401|emb|CAZ94666.1| Ribosomal protein L28 [Zobellia galactanivorans]
Length = 78
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK FGN VS NKTRR + N+ +KR + DR + +KV+ AL+ I+K G
Sbjct: 7 ITGKRAMFGNNVSFSI-NKTRRRFNVNLSKKRFYIPEEDRWVTLKVSAKALKIINKRG 63
>gi|386820624|ref|ZP_10107840.1| ribosomal protein L28 [Joostella marina DSM 19592]
gi|386425730|gb|EIJ39560.1| ribosomal protein L28 [Joostella marina DSM 19592]
Length = 78
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + N+ +KR F DR + +K++T AL+ I+K G
Sbjct: 7 LTGKKAMVGNNVSH-AMNKTKRKFDANLIKKRFFLPEEDRWVTLKISTSALKTINKKG 63
>gi|406662292|ref|ZP_11070392.1| 50S ribosomal protein L28 [Cecembia lonarensis LW9]
gi|410029379|ref|ZP_11279215.1| 50S ribosomal protein L28 [Marinilabilia sp. AK2]
gi|405553741|gb|EKB48927.1| 50S ribosomal protein L28 [Cecembia lonarensis LW9]
Length = 80
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK + GN VS NKT+R + PN+ +K + D I +KV T ALR I+
Sbjct: 2 AKVCDITGKRPRVGNNVSH-ANNKTKRKFYPNLHKKNFYIPEEDAWITLKVCTKALRTIN 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|312380838|gb|EFR26727.1| hypothetical protein AND_06985 [Anopheles darlingi]
Length = 278
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
VP I A G++ G+ + G + + W P ++ + S +++ ++ V
Sbjct: 65 VPLPLIDPPEAHHGIWGGEAVIKGFQKRNQYKRRVPHFWVPVLRRSVVHSRVLNDYMAVT 124
Query: 94 VTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKI 132
VT L I G D YLLKTP + + + + K KI
Sbjct: 125 VTDRTLEQIHDHHGFDHYLLKTPACDLRSMLAIKLKKKI 163
>gi|336171313|ref|YP_004578451.1| 50S ribosomal protein L28 [Lacinutrix sp. 5H-3-7-4]
gi|334725885|gb|AEH00023.1| 50S ribosomal protein L28 [Lacinutrix sp. 5H-3-7-4]
Length = 78
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + N+ +KR F D+ I +KV+T AL+ I+K G
Sbjct: 7 LTGKKAMVGNNVSH-AMNKTKRKFNANLIKKRFFLPEEDKWITLKVSTSALKTINKIG 63
>gi|256422104|ref|YP_003122757.1| 50S ribosomal protein L28 [Chitinophaga pinensis DSM 2588]
gi|256037012|gb|ACU60556.1| ribosomal protein L28 [Chitinophaga pinensis DSM 2588]
Length = 78
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G H+ F N KT+R + PN+Q+KR F DR I +KV+ LR I+K G
Sbjct: 13 ITGHHVSFSNI-------KTKRRFLPNLQKKRFFLAEEDRWISLKVSADGLRTINKNG 63
>gi|213966101|ref|ZP_03394289.1| conserved domain protein [Corynebacterium amycolatum SK46]
gi|213951299|gb|EEB62693.1| conserved domain protein [Corynebacterium amycolatum SK46]
Length = 135
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G+ FG VS +T R W PNVQ K+ + RHI + V+ L+ IDK G
Sbjct: 65 TGRKPSFGKTVSHSH-RRTSRRWNPNVQRKKFYLASEGRHITLNVSPKGLKTIDKYG 120
>gi|219847552|ref|YP_002461985.1| 50S ribosomal protein L28 [Chloroflexus aggregans DSM 9485]
gi|219541811|gb|ACL23549.1| ribosomal protein L28 [Chloroflexus aggregans DSM 9485]
Length = 83
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R GK FG+ VS +T R W PNVQ +R++ R++++K++ ALR I+
Sbjct: 2 ARRCDLTGKGPSFGHHVSFSK-RRTNRRWLPNVQTRRIWVPEEQRYVKLKLSAAALREIN 60
Query: 104 KAG 106
+ G
Sbjct: 61 RKG 63
>gi|378716845|ref|YP_005281734.1| 50S ribosomal protein L28 [Gordonia polyisoprenivorans VH2]
gi|375751548|gb|AFA72368.1| 50S ribosomal protein L28 [Gordonia polyisoprenivorans VH2]
Length = 78
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 56 FGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
FG VS +T R W PN+Q +R + DRH+ ++V+ ++ ID+ G
Sbjct: 14 FGKLVSHSH-KRTNRRWNPNIQRRRFYLPSEDRHVTLRVSARGIKTIDRRG 63
>gi|422437377|ref|ZP_16514224.1| ribosomal protein L28 [Propionibacterium acnes HL092PA1]
gi|422530654|ref|ZP_16606612.1| ribosomal protein L28 [Propionibacterium acnes HL110PA1]
gi|313793640|gb|EFS41671.1| ribosomal protein L28 [Propionibacterium acnes HL110PA1]
gi|327455973|gb|EGF02628.1| ribosomal protein L28 [Propionibacterium acnes HL092PA1]
Length = 78
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R G +FGN VS + T+R W PN+Q+KR + + R + + +T A++ ID
Sbjct: 2 SRRCQVRGTKPEFGNNVSHSQRH-TKRRWNPNIQKKRYWVPSLGRKVTLTLTPQAIKEID 60
Query: 104 KAG 106
+ G
Sbjct: 61 RRG 63
>gi|341896766|gb|EGT52701.1| hypothetical protein CAEBREN_19152 [Caenorhabditis brenneri]
Length = 310
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 18/103 (17%)
Query: 70 RNWKPNV-----QEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEM 124
RNW P + + L+S I++++++V VT A+R ID+ G+D Y+L++ +D++
Sbjct: 126 RNWVPKLFFPALKNVVLYSEILNKYMKVTVTERAMRLIDEHFGLDYYILESQEIDLDSKF 185
Query: 125 GLYWKTKIEKL------YEE-------LGQTEVAFFTPEEEAK 154
K ++ + YEE + + F PEEEA+
Sbjct: 186 ANSLKREMLLILSSGTYYEEDDEKKAYIKEKYAKFVIPEEEAE 228
>gi|313140599|ref|ZP_07802792.1| 50S ribosomal protein L28-2 [Bifidobacterium bifidum NCIMB 41171]
gi|313133109|gb|EFR50726.1| 50S ribosomal protein L28-2 [Bifidobacterium bifidum NCIMB 41171]
Length = 98
Score = 40.8 bits (94), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
+K+ G GNRVS KTRR + PN+Q KR + + RH+ + V+ ++ ID
Sbjct: 2 SKQCQILGTRASTGNRVSHSH-RKTRRRFNPNLQTKRYWVPSLGRHVTLTVSVKGMKTID 60
Query: 104 KAG 106
+ G
Sbjct: 61 RIG 63
>gi|456391841|gb|EMF57199.1| 50S ribosomal protein L28 [Streptomyces bottropensis ATCC 25435]
Length = 73
Score = 40.8 bits (94), Expect = 0.39, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 48 LFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
+ G FGNR+S +T R + PN+Q KR + +RH+R++++T ++ +D G
Sbjct: 1 MLTGARPGFGNRISHSH-RRTSRRFDPNIQSKRYWLPSENRHVRLRLSTKGIKTVDVIG 58
>gi|344941315|ref|ZP_08780603.1| 50S ribosomal protein L28 [Methylobacter tundripaludum SV96]
gi|344262507|gb|EGW22778.1| 50S ribosomal protein L28 [Methylobacter tundripaludum SV96]
Length = 78
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS N+T+R + PN+Q R + +R +R++++T +R IDK GI
Sbjct: 7 VTGKRPVTGNNVSH-ANNRTKRRFCPNLQHHRFWVESENRWVRLRISTKGMRIIDKK-GI 64
Query: 109 DEYL 112
D L
Sbjct: 65 DAVL 68
>gi|311064682|ref|YP_003971407.1| 50S ribosomal protein L28 [Bifidobacterium bifidum PRL2010]
gi|310867001|gb|ADP36370.1| RpmB LSU ribosomal protein L28P [Bifidobacterium bifidum PRL2010]
Length = 98
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
+K+ G GNRVS KTRR + PN+Q KR + + RH+ + V+ ++ ID
Sbjct: 2 SKQCQILGTRASTGNRVSHSH-RKTRRRFNPNLQTKRYWVPSLGRHVTLTVSVKGMKTID 60
Query: 104 KAG 106
+ G
Sbjct: 61 RIG 63
>gi|213692825|ref|YP_002323411.1| 50S ribosomal protein L28 [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|384197383|ref|YP_005583127.1| 50S ribosomal protein L28 [Bifidobacterium breve ACS-071-V-Sch8b]
gi|384200043|ref|YP_005585786.1| 50S ribosomal protein L28 [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|213524286|gb|ACJ53033.1| ribosomal protein L28 [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|320458995|dbj|BAJ69616.1| 50S ribosomal protein L28 [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|333109883|gb|AEF26899.1| ribosomal protein L28 [Bifidobacterium breve ACS-071-V-Sch8b]
Length = 78
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G GNRVS KTRR + PN+Q KR + + RH+ + V+ ++ ID+ G
Sbjct: 9 GTRAGVGNRVSHSH-RKTRRTFAPNLQSKRYWVPSLQRHVTLTVSAKGIKTIDRIG 63
>gi|220933511|ref|YP_002512410.1| 50S ribosomal protein L28 [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254801385|sp|B8GUR2.1|RL28_THISH RecName: Full=50S ribosomal protein L28
gi|219994821|gb|ACL71423.1| ribosomal protein L28 [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 78
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKTRR + PN+ R + +R +R+++++ LR IDK GI
Sbjct: 7 ITGKRPVTGNNVSH-AHNKTRRRFLPNLHSHRFWVESENRWVRLRISSKGLRIIDKK-GI 64
Query: 109 DEYL 112
D L
Sbjct: 65 DAVL 68
>gi|170719375|ref|YP_001747063.1| 50S ribosomal protein L28 [Pseudomonas putida W619]
gi|226699150|sp|B1J4M3.1|RL28_PSEPW RecName: Full=50S ribosomal protein L28
gi|169757378|gb|ACA70694.1| ribosomal protein L28 [Pseudomonas putida W619]
Length = 78
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN +S NKTRR + PN+Q R + +R +R++V+ +R IDK GID
Sbjct: 8 TGKGPVTGNNISH-ANNKTRRRFLPNLQHHRFWVESENRFVRLRVSAKGMRVIDKR-GID 65
Query: 110 EYL 112
L
Sbjct: 66 VVL 68
>gi|384098017|ref|ZP_09999136.1| 50S ribosomal protein L28 [Imtechella halotolerans K1]
gi|383836163|gb|EID75576.1| 50S ribosomal protein L28 [Imtechella halotolerans K1]
Length = 78
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + N+ +KR + DR I +KV+T A++ I+K G
Sbjct: 7 LTGKKAMVGNNVSH-AMNKTKRKFDANLTKKRFYIPEEDRWITLKVSTSAIKTINKKG 63
>gi|375335620|ref|ZP_09776964.1| 50S ribosomal protein L28 [Succinivibrionaceae bacterium WG-1]
Length = 78
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN S N TRR + PN+Q R + +R +++++TT A+R IDK GID
Sbjct: 9 GKRPAVGNNRSH-AKNATRRRFLPNLQTHRFWVESENRFVQLRLTTRAMRTIDKK-GIDA 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|224534189|ref|ZP_03674767.1| ribosomal protein L28 [Borrelia spielmanii A14S]
gi|224514291|gb|EEF84607.1| ribosomal protein L28 [Borrelia spielmanii A14S]
Length = 92
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 13/81 (16%)
Query: 44 AKRGLFAGKHIQFGNRVSEDG------------GNKTRRNWKPNVQEKRLFSYIMDRHIR 91
A++ GK FG+ V G G KT+R +K N+ K+ F + R I
Sbjct: 2 ARKCEITGKKTMFGSNVPRKGLAKKKGGAGQHIGVKTKRTFKVNLINKKFFIPDLGRSIN 61
Query: 92 VKVTTHALRCIDKAGGIDEYL 112
+KV+ ALR I K G+D +L
Sbjct: 62 IKVSASALRSISKL-GLDAFL 81
>gi|134281303|ref|ZP_01768012.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 305]
gi|226194518|ref|ZP_03790116.1| 50S ribosomal protein L28 [Burkholderia pseudomallei Pakistan 9]
gi|387903019|ref|YP_006333358.1| 50S ribosomal protein L28 [Burkholderia sp. KJ006]
gi|403517634|ref|YP_006651767.1| 50S ribosomal protein L28 [Burkholderia pseudomallei BPC006]
gi|421866515|ref|ZP_16298182.1| LSU ribosomal protein L28p [Burkholderia cenocepacia H111]
gi|424902443|ref|ZP_18325959.1| 50S ribosomal protein L28 [Burkholderia thailandensis MSMB43]
gi|134247609|gb|EBA47694.1| 50S ribosomal protein L28 [Burkholderia pseudomallei 305]
gi|225933603|gb|EEH29592.1| 50S ribosomal protein L28 [Burkholderia pseudomallei Pakistan 9]
gi|358073540|emb|CCE49060.1| LSU ribosomal protein L28p [Burkholderia cenocepacia H111]
gi|387577911|gb|AFJ86627.1| LSU ribosomal protein L28p [Burkholderia sp. KJ006]
gi|390932818|gb|EIP90218.1| 50S ribosomal protein L28 [Burkholderia thailandensis MSMB43]
gi|403073277|gb|AFR14857.1| 50S ribosomal protein L28 [Burkholderia pseudomallei BPC006]
Length = 65
Score = 40.8 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYL 112
GN VS NKT+R + PN+Q +R + +R +R++V+ LR IDK GID L
Sbjct: 3 GNNVSH-ANNKTKRRFLPNLQNRRFWVESENRWVRLRVSNAGLRLIDK-NGIDSVL 56
>gi|29653643|ref|NP_819335.1| 50S ribosomal protein L28 [Coxiella burnetii RSA 493]
gi|153208650|ref|ZP_01946902.1| ribosomal protein L28 [Coxiella burnetii 'MSU Goat Q177']
gi|154707613|ref|YP_001425122.1| 50S ribosomal protein L28 [Coxiella burnetii Dugway 5J108-111]
gi|161830851|ref|YP_001596241.1| 50S ribosomal protein L28 [Coxiella burnetii RSA 331]
gi|165919768|ref|ZP_02219511.1| ribosomal protein L28 [Coxiella burnetii Q321]
gi|212213200|ref|YP_002304136.1| 50S ribosomal protein L28 [Coxiella burnetii CbuG_Q212]
gi|212218126|ref|YP_002304913.1| 50S ribosomal protein L28 [Coxiella burnetii CbuK_Q154]
gi|67461514|sp|Q83EM4.1|RL28_COXBU RecName: Full=50S ribosomal protein L28
gi|189042431|sp|A9KGS7.1|RL28_COXBN RecName: Full=50S ribosomal protein L28
gi|189042432|sp|A9NB26.1|RL28_COXBR RecName: Full=50S ribosomal protein L28
gi|226738060|sp|B6J5S6.1|RL28_COXB1 RecName: Full=50S ribosomal protein L28
gi|226738061|sp|B6J213.1|RL28_COXB2 RecName: Full=50S ribosomal protein L28
gi|29540905|gb|AAO89849.1| LSU ribosomal protein L28P [Coxiella burnetii RSA 493]
gi|120575836|gb|EAX32460.1| ribosomal protein L28 [Coxiella burnetii 'MSU Goat Q177']
gi|154356899|gb|ABS78361.1| LSU ribosomal protein L28P [Coxiella burnetii Dugway 5J108-111]
gi|161762718|gb|ABX78360.1| ribosomal protein L28 [Coxiella burnetii RSA 331]
gi|165916851|gb|EDR35455.1| ribosomal protein L28 [Coxiella burnetii Q321]
gi|212011610|gb|ACJ18991.1| LSU ribosomal protein L28P [Coxiella burnetii CbuG_Q212]
gi|212012388|gb|ACJ19768.1| LSU ribosomal protein L28P [Coxiella burnetii CbuK_Q154]
Length = 79
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK Q GN VS KT R + PN++++R + R I + V+TH +R ID
Sbjct: 2 AKVCQVTGKRPQSGNNVSH-ANKKTNRRFLPNLKKRRFWLPDEKRFITLTVSTHGMRIID 60
Query: 104 KAG 106
K G
Sbjct: 61 KLG 63
>gi|394989341|ref|ZP_10382175.1| 50S ribosomal protein L28 [Sulfuricella denitrificans skB26]
gi|393791760|dbj|GAB71814.1| 50S ribosomal protein L28 [Sulfuricella denitrificans skB26]
Length = 78
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS N+T+R + PN+Q ++ + +R + ++++ ALR IDK GI
Sbjct: 7 ITGKKPMSGNNVSH-ANNRTKRRFLPNLQNRKFWVESENRWVSMRLSCAALRTIDK-NGI 64
Query: 109 DEYLLK 114
D L K
Sbjct: 65 DAVLAK 70
>gi|407804028|ref|ZP_11150857.1| 50S ribosomal protein L28 [Alcanivorax sp. W11-5]
gi|407021965|gb|EKE33723.1| 50S ribosomal protein L28 [Alcanivorax sp. W11-5]
Length = 78
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKT+R ++PN+ R + +R +R++V++ +R IDK GID
Sbjct: 8 TGKRPVTGNNVSH-ANNKTKRRFEPNLHYHRFWVASENRFVRLRVSSKGMRIIDKL-GID 65
Query: 110 EYL 112
+ L
Sbjct: 66 KVL 68
>gi|226951952|ref|ZP_03822416.1| 50S ribosomal protein L28 [Acinetobacter sp. ATCC 27244]
gi|294649214|ref|ZP_06726652.1| 50S ribosomal protein L28 [Acinetobacter haemolyticus ATCC 19194]
gi|226837290|gb|EEH69673.1| 50S ribosomal protein L28 [Acinetobacter sp. ATCC 27244]
gi|292824881|gb|EFF83646.1| 50S ribosomal protein L28 [Acinetobacter haemolyticus ATCC 19194]
Length = 82
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R ++PN+ R + R +R+++TT +R IDK G
Sbjct: 12 TGKRPIVGNNVSH-ANNKTKRRFEPNLHHHRFWLESEKRFVRLRLTTKGMRIIDKLG 67
>gi|260562923|ref|ZP_05833409.1| ribosomal protein L28 [Brucella melitensis bv. 1 str. 16M]
gi|260152939|gb|EEW88031.1| ribosomal protein L28 [Brucella melitensis bv. 1 str. 16M]
Length = 59
Score = 40.8 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 41 MNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALR 100
M+RA GK +Q+GN VS N+TRR + PN+ L S + + R++++ +ALR
Sbjct: 1 MSRACE--LTGKSVQYGNNVSH-ANNRTRRRFLPNLCNVTLISETLGQSYRLRISANALR 57
Query: 101 CI 102
+
Sbjct: 58 SV 59
>gi|83643894|ref|YP_432329.1| 50S ribosomal protein L28 [Hahella chejuensis KCTC 2396]
gi|123534643|sp|Q2SN70.1|RL28_HAHCH RecName: Full=50S ribosomal protein L28
gi|83631937|gb|ABC27904.1| ribosomal protein L28 [Hahella chejuensis KCTC 2396]
Length = 78
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKT+R + PN+Q R + R ++++V+T +R IDK GID
Sbjct: 8 TGKSPITGNNVSH-ANNKTKRRFLPNLQTHRFWVENEKRFVKLRVSTKGMRIIDKV-GID 65
Query: 110 EYL 112
+ L
Sbjct: 66 KVL 68
>gi|398339151|ref|ZP_10523854.1| 50S ribosomal protein L28 [Leptospira kirschneri serovar Bim str.
1051]
gi|418739732|ref|ZP_13296113.1| ribosomal protein L28 [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|421090804|ref|ZP_15551594.1| ribosomal protein L28 [Leptospira kirschneri str. 200802841]
gi|410000390|gb|EKO51020.1| ribosomal protein L28 [Leptospira kirschneri str. 200802841]
gi|410752854|gb|EKR09826.1| ribosomal protein L28 [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 94
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R G+ GN VS KTRR WK N+ +KR+F +R + V+++T ALR +
Sbjct: 2 ARRCEVTGRGTVSGNNVSHSH-IKTRRTWKVNLIKKRIFLEDENRWVTVRLSTRALRTLR 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|50083741|ref|YP_045251.1| 50S ribosomal protein L28 [Acinetobacter sp. ADP1]
gi|126640521|ref|YP_001083505.1| 50S ribosomal protein L28 [Acinetobacter baumannii ATCC 17978]
gi|169634455|ref|YP_001708191.1| 50S ribosomal protein L28 [Acinetobacter baumannii SDF]
gi|169797300|ref|YP_001715093.1| 50S ribosomal protein L28 [Acinetobacter baumannii AYE]
gi|184156778|ref|YP_001845117.1| 50S ribosomal protein L28 [Acinetobacter baumannii ACICU]
gi|213155890|ref|YP_002317935.1| 50S ribosomal protein L28 [Acinetobacter baumannii AB0057]
gi|215484737|ref|YP_002326972.1| ribosomal protein L28 [Acinetobacter baumannii AB307-0294]
gi|239500819|ref|ZP_04660129.1| 50S ribosomal protein L28 [Acinetobacter baumannii AB900]
gi|255321191|ref|ZP_05362357.1| ribosomal protein L28 [Acinetobacter radioresistens SK82]
gi|260549128|ref|ZP_05823349.1| ribosomal protein L28 [Acinetobacter sp. RUH2624]
gi|260556188|ref|ZP_05828407.1| ribosomal protein L28 [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|262280873|ref|ZP_06058656.1| ribosomal protein L28 [Acinetobacter calcoaceticus RUH2202]
gi|262369955|ref|ZP_06063282.1| ribosomal protein L28 [Acinetobacter johnsonii SH046]
gi|262375013|ref|ZP_06068247.1| ribosomal protein L28 [Acinetobacter lwoffii SH145]
gi|262380123|ref|ZP_06073278.1| ribosomal protein L28 [Acinetobacter radioresistens SH164]
gi|293610244|ref|ZP_06692545.1| 50S ribosomal protein L28 [Acinetobacter sp. SH024]
gi|299771669|ref|YP_003733695.1| 50S ribosomal protein L28 [Acinetobacter oleivorans DR1]
gi|301346579|ref|ZP_07227320.1| 50S ribosomal protein L28 [Acinetobacter baumannii AB056]
gi|301511046|ref|ZP_07236283.1| 50S ribosomal protein L28 [Acinetobacter baumannii AB058]
gi|301596908|ref|ZP_07241916.1| 50S ribosomal protein L28 [Acinetobacter baumannii AB059]
gi|332853001|ref|ZP_08434511.1| ribosomal protein L28 [Acinetobacter baumannii 6013150]
gi|332866451|ref|ZP_08437020.1| ribosomal protein L28 [Acinetobacter baumannii 6013113]
gi|332873190|ref|ZP_08441147.1| ribosomal protein L28 [Acinetobacter baumannii 6014059]
gi|358011746|ref|ZP_09143556.1| 50S ribosomal protein L28 [Acinetobacter sp. P8-3-8]
gi|375136978|ref|YP_004997628.1| 50S ribosomal protein L28 [Acinetobacter calcoaceticus PHEA-2]
gi|384130450|ref|YP_005513062.1| rpmB [Acinetobacter baumannii 1656-2]
gi|384141735|ref|YP_005524445.1| 50S ribosomal protein L28 [Acinetobacter baumannii MDR-ZJ06]
gi|385236048|ref|YP_005797387.1| 50S ribosomal protein L28 [Acinetobacter baumannii TCDC-AB0715]
gi|387125307|ref|YP_006291189.1| 50S ribosomal protein L28 [Acinetobacter baumannii MDR-TJ]
gi|403050306|ref|ZP_10904790.1| 50S ribosomal protein L28 [Acinetobacter bereziniae LMG 1003]
gi|403673807|ref|ZP_10936091.1| 50S ribosomal protein L28 [Acinetobacter sp. NCTC 10304]
gi|406038290|ref|ZP_11045645.1| 50S ribosomal protein L28 [Acinetobacter ursingii DSM 16037 = CIP
107286]
gi|407931383|ref|YP_006847026.1| rpmB [Acinetobacter baumannii TYTH-1]
gi|416150852|ref|ZP_11603499.1| 50S ribosomal protein L28 [Acinetobacter baumannii AB210]
gi|417546361|ref|ZP_12197447.1| ribosomal protein L28 [Acinetobacter baumannii OIFC032]
gi|417548196|ref|ZP_12199277.1| ribosomal protein L28 [Acinetobacter baumannii Naval-18]
gi|417554722|ref|ZP_12205791.1| ribosomal protein L28 [Acinetobacter baumannii Naval-81]
gi|417561987|ref|ZP_12212866.1| ribosomal protein L28 [Acinetobacter baumannii OIFC137]
gi|417567303|ref|ZP_12218175.1| ribosomal protein L28 [Acinetobacter baumannii OIFC143]
gi|417570677|ref|ZP_12221534.1| ribosomal protein L28 [Acinetobacter baumannii OIFC189]
gi|417575366|ref|ZP_12226219.1| ribosomal protein L28 [Acinetobacter baumannii Canada BC-5]
gi|417577542|ref|ZP_12228387.1| ribosomal protein L28 [Acinetobacter baumannii Naval-17]
gi|417871090|ref|ZP_12516034.1| 50S ribosomal protein L28 [Acinetobacter baumannii ABNIH1]
gi|417875752|ref|ZP_12520557.1| 50S ribosomal protein L28 [Acinetobacter baumannii ABNIH2]
gi|417879750|ref|ZP_12524305.1| 50S ribosomal protein L28 [Acinetobacter baumannii ABNIH3]
gi|417882088|ref|ZP_12526396.1| 50S ribosomal protein L28 [Acinetobacter baumannii ABNIH4]
gi|421200836|ref|ZP_15657995.1| ribosomal protein L28 [Acinetobacter baumannii OIFC109]
gi|421202601|ref|ZP_15659749.1| 50S ribosomal protein L28 [Acinetobacter baumannii AC12]
gi|421454276|ref|ZP_15903625.1| ribosomal protein L28 [Acinetobacter baumannii IS-123]
gi|421464692|ref|ZP_15913382.1| ribosomal protein L28 [Acinetobacter radioresistens WC-A-157]
gi|421533695|ref|ZP_15979976.1| 50S ribosomal protein L28 [Acinetobacter baumannii AC30]
gi|421622294|ref|ZP_16063199.1| ribosomal protein L28 [Acinetobacter baumannii OIFC074]
gi|421625645|ref|ZP_16066491.1| ribosomal protein L28 [Acinetobacter baumannii OIFC098]
gi|421630739|ref|ZP_16071440.1| ribosomal protein L28 [Acinetobacter baumannii OIFC180]
gi|421634292|ref|ZP_16074911.1| ribosomal protein L28 [Acinetobacter baumannii Naval-13]
gi|421642935|ref|ZP_16083446.1| ribosomal protein L28 [Acinetobacter baumannii IS-235]
gi|421649140|ref|ZP_16089535.1| ribosomal protein L28 [Acinetobacter baumannii IS-251]
gi|421651050|ref|ZP_16091422.1| ribosomal protein L28 [Acinetobacter baumannii OIFC0162]
gi|421655103|ref|ZP_16095427.1| ribosomal protein L28 [Acinetobacter baumannii Naval-72]
gi|421659362|ref|ZP_16099583.1| ribosomal protein L28 [Acinetobacter baumannii Naval-83]
gi|421662238|ref|ZP_16102406.1| ribosomal protein L28 [Acinetobacter baumannii OIFC110]
gi|421666445|ref|ZP_16106537.1| ribosomal protein L28 [Acinetobacter baumannii OIFC087]
gi|421671077|ref|ZP_16111059.1| ribosomal protein L28 [Acinetobacter baumannii OIFC099]
gi|421675818|ref|ZP_16115737.1| ribosomal protein L28 [Acinetobacter baumannii OIFC065]
gi|421677623|ref|ZP_16117515.1| ribosomal protein L28 [Acinetobacter baumannii OIFC111]
gi|421688442|ref|ZP_16128142.1| ribosomal protein L28 [Acinetobacter baumannii IS-143]
gi|421692523|ref|ZP_16132174.1| ribosomal protein L28 [Acinetobacter baumannii IS-116]
gi|421694094|ref|ZP_16133726.1| ribosomal protein L28 [Acinetobacter baumannii WC-692]
gi|421697860|ref|ZP_16137404.1| ribosomal protein L28 [Acinetobacter baumannii IS-58]
gi|421702182|ref|ZP_16141667.1| 50S ribosomal protein L28 [Acinetobacter baumannii ZWS1122]
gi|421705921|ref|ZP_16145342.1| 50S ribosomal protein L28 [Acinetobacter baumannii ZWS1219]
gi|421789251|ref|ZP_16225513.1| ribosomal protein L28 [Acinetobacter baumannii Naval-82]
gi|421792391|ref|ZP_16228546.1| ribosomal protein L28 [Acinetobacter baumannii Naval-2]
gi|421796999|ref|ZP_16233049.1| ribosomal protein L28 [Acinetobacter baumannii Naval-21]
gi|421800642|ref|ZP_16236614.1| ribosomal protein L28 [Acinetobacter baumannii Canada BC1]
gi|421805663|ref|ZP_16241539.1| ribosomal protein L28 [Acinetobacter baumannii WC-A-694]
gi|421807920|ref|ZP_16243777.1| ribosomal protein L28 [Acinetobacter baumannii OIFC035]
gi|421855080|ref|ZP_16287461.1| 50S ribosomal protein L28 [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|424053794|ref|ZP_17791325.1| 50S ribosomal protein L28 [Acinetobacter baumannii Ab11111]
gi|424057050|ref|ZP_17794567.1| 50S ribosomal protein L28 [Acinetobacter nosocomialis Ab22222]
gi|424061238|ref|ZP_17798728.1| 50S ribosomal protein L28 [Acinetobacter baumannii Ab33333]
gi|424064729|ref|ZP_17802213.1| 50S ribosomal protein L28 [Acinetobacter baumannii Ab44444]
gi|424745438|ref|ZP_18173701.1| ribosomal protein L28 [Acinetobacter baumannii WC-141]
gi|425741791|ref|ZP_18859924.1| ribosomal protein L28 [Acinetobacter baumannii WC-487]
gi|425749177|ref|ZP_18867157.1| ribosomal protein L28 [Acinetobacter baumannii WC-348]
gi|425751545|ref|ZP_18869490.1| ribosomal protein L28 [Acinetobacter baumannii Naval-113]
gi|427422938|ref|ZP_18913104.1| ribosomal protein L28 [Acinetobacter baumannii WC-136]
gi|445400097|ref|ZP_21429747.1| ribosomal protein L28 [Acinetobacter baumannii Naval-57]
gi|445437414|ref|ZP_21441060.1| ribosomal protein L28 [Acinetobacter baumannii OIFC021]
gi|445446849|ref|ZP_21443480.1| ribosomal protein L28 [Acinetobacter baumannii WC-A-92]
gi|445458251|ref|ZP_21447075.1| ribosomal protein L28 [Acinetobacter baumannii OIFC047]
gi|445465161|ref|ZP_21449939.1| ribosomal protein L28 [Acinetobacter baumannii OIFC338]
gi|445481451|ref|ZP_21455895.1| ribosomal protein L28 [Acinetobacter baumannii Naval-78]
gi|445486356|ref|ZP_21457414.1| ribosomal protein L28 [Acinetobacter baumannii AA-014]
gi|67461401|sp|Q6FES9.1|RL28_ACIAD RecName: Full=50S ribosomal protein L28
gi|166226530|sp|A3M1V9.1|RL28_ACIBT RecName: Full=50S ribosomal protein L28
gi|226738013|sp|B7H0Q4.1|RL28_ACIB3 RecName: Full=50S ribosomal protein L28
gi|226738014|sp|B7I4T0.1|RL28_ACIB5 RecName: Full=50S ribosomal protein L28
gi|226738015|sp|B2I392.1|RL28_ACIBC RecName: Full=50S ribosomal protein L28
gi|226738016|sp|B0VL79.1|RL28_ACIBS RecName: Full=50S ribosomal protein L28
gi|226738017|sp|B0V4N1.1|RL28_ACIBY RecName: Full=50S ribosomal protein L28
gi|49529717|emb|CAG67429.1| 50S ribosomal protein L28 [Acinetobacter sp. ADP1]
gi|126386405|gb|ABO10903.1| 50S ribosomal protein L28 [Acinetobacter baumannii ATCC 17978]
gi|169150227|emb|CAM88123.1| 50S ribosomal protein L28 [Acinetobacter baumannii AYE]
gi|169153247|emb|CAP02347.1| 50S ribosomal protein L28 [Acinetobacter baumannii]
gi|183208372|gb|ACC55770.1| putative ribosomal protein L28 [Acinetobacter baumannii ACICU]
gi|213055050|gb|ACJ39952.1| ribosomal protein L28 [Acinetobacter baumannii AB0057]
gi|213986890|gb|ACJ57189.1| ribosomal protein L28 [Acinetobacter baumannii AB307-0294]
gi|255301745|gb|EET80996.1| ribosomal protein L28 [Acinetobacter radioresistens SK82]
gi|260407856|gb|EEX01328.1| ribosomal protein L28 [Acinetobacter sp. RUH2624]
gi|260410243|gb|EEX03542.1| ribosomal protein L28 [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|262257773|gb|EEY76508.1| ribosomal protein L28 [Acinetobacter calcoaceticus RUH2202]
gi|262298317|gb|EEY86231.1| ribosomal protein L28 [Acinetobacter radioresistens SH164]
gi|262310026|gb|EEY91155.1| ribosomal protein L28 [Acinetobacter lwoffii SH145]
gi|262314994|gb|EEY96034.1| ribosomal protein L28 [Acinetobacter johnsonii SH046]
gi|292827476|gb|EFF85840.1| 50S ribosomal protein L28 [Acinetobacter sp. SH024]
gi|298701757|gb|ADI92322.1| 50S ribosomal protein L28 [Acinetobacter oleivorans DR1]
gi|322506670|gb|ADX02124.1| rpmB [Acinetobacter baumannii 1656-2]
gi|323516545|gb|ADX90926.1| 50S ribosomal protein L28 [Acinetobacter baumannii TCDC-AB0715]
gi|325124423|gb|ADY83946.1| 50S ribosomal protein L28 [Acinetobacter calcoaceticus PHEA-2]
gi|332728937|gb|EGJ60292.1| ribosomal protein L28 [Acinetobacter baumannii 6013150]
gi|332734608|gb|EGJ65715.1| ribosomal protein L28 [Acinetobacter baumannii 6013113]
gi|332738702|gb|EGJ69572.1| ribosomal protein L28 [Acinetobacter baumannii 6014059]
gi|333363827|gb|EGK45841.1| 50S ribosomal protein L28 [Acinetobacter baumannii AB210]
gi|342225105|gb|EGT90115.1| 50S ribosomal protein L28 [Acinetobacter baumannii ABNIH2]
gi|342226406|gb|EGT91379.1| 50S ribosomal protein L28 [Acinetobacter baumannii ABNIH1]
gi|342227531|gb|EGT92454.1| 50S ribosomal protein L28 [Acinetobacter baumannii ABNIH3]
gi|342238337|gb|EGU02770.1| 50S ribosomal protein L28 [Acinetobacter baumannii ABNIH4]
gi|347592228|gb|AEP04949.1| 50S ribosomal protein L28 [Acinetobacter baumannii MDR-ZJ06]
gi|385879799|gb|AFI96894.1| ribosomal protein L28 [Acinetobacter baumannii MDR-TJ]
gi|395524569|gb|EJG12658.1| ribosomal protein L28 [Acinetobacter baumannii OIFC137]
gi|395551125|gb|EJG17134.1| ribosomal protein L28 [Acinetobacter baumannii OIFC189]
gi|395552975|gb|EJG18983.1| ribosomal protein L28 [Acinetobacter baumannii OIFC143]
gi|395562868|gb|EJG24521.1| ribosomal protein L28 [Acinetobacter baumannii OIFC109]
gi|395570763|gb|EJG31425.1| ribosomal protein L28 [Acinetobacter baumannii Naval-17]
gi|398327984|gb|EJN44114.1| 50S ribosomal protein L28 [Acinetobacter baumannii AC12]
gi|400205445|gb|EJO36426.1| ribosomal protein L28 [Acinetobacter radioresistens WC-A-157]
gi|400206099|gb|EJO37079.1| ribosomal protein L28 [Acinetobacter baumannii Canada BC-5]
gi|400213043|gb|EJO44000.1| ribosomal protein L28 [Acinetobacter baumannii IS-123]
gi|400384249|gb|EJP42927.1| ribosomal protein L28 [Acinetobacter baumannii OIFC032]
gi|400388495|gb|EJP51567.1| ribosomal protein L28 [Acinetobacter baumannii Naval-18]
gi|400391139|gb|EJP58186.1| ribosomal protein L28 [Acinetobacter baumannii Naval-81]
gi|403189398|dbj|GAB73662.1| 50S ribosomal protein L28 [Acinetobacter radioresistens DSM 6976 =
NBRC 102413]
gi|404559809|gb|EKA65060.1| ribosomal protein L28 [Acinetobacter baumannii IS-116]
gi|404561185|gb|EKA66421.1| ribosomal protein L28 [Acinetobacter baumannii IS-143]
gi|404569933|gb|EKA75018.1| ribosomal protein L28 [Acinetobacter baumannii WC-692]
gi|404572906|gb|EKA77946.1| ribosomal protein L28 [Acinetobacter baumannii IS-58]
gi|404666920|gb|EKB34850.1| 50S ribosomal protein L28 [Acinetobacter baumannii Ab33333]
gi|404667280|gb|EKB35201.1| 50S ribosomal protein L28 [Acinetobacter baumannii Ab11111]
gi|404672812|gb|EKB40616.1| 50S ribosomal protein L28 [Acinetobacter baumannii Ab44444]
gi|407194945|gb|EKE66081.1| 50S ribosomal protein L28 [Acinetobacter baumannii ZWS1122]
gi|407195334|gb|EKE66468.1| 50S ribosomal protein L28 [Acinetobacter baumannii ZWS1219]
gi|407440583|gb|EKF47100.1| 50S ribosomal protein L28 [Acinetobacter nosocomialis Ab22222]
gi|407899964|gb|AFU36795.1| rpmB [Acinetobacter baumannii TYTH-1]
gi|408509062|gb|EKK10738.1| ribosomal protein L28 [Acinetobacter baumannii OIFC0162]
gi|408509240|gb|EKK10915.1| ribosomal protein L28 [Acinetobacter baumannii Naval-72]
gi|408511501|gb|EKK13149.1| ribosomal protein L28 [Acinetobacter baumannii IS-235]
gi|408513913|gb|EKK15525.1| ribosomal protein L28 [Acinetobacter baumannii IS-251]
gi|408696196|gb|EKL41744.1| ribosomal protein L28 [Acinetobacter baumannii OIFC074]
gi|408697125|gb|EKL42645.1| ribosomal protein L28 [Acinetobacter baumannii OIFC180]
gi|408697739|gb|EKL43245.1| ribosomal protein L28 [Acinetobacter baumannii OIFC098]
gi|408705010|gb|EKL50366.1| ribosomal protein L28 [Acinetobacter baumannii Naval-13]
gi|408708073|gb|EKL53351.1| ribosomal protein L28 [Acinetobacter baumannii Naval-83]
gi|408715041|gb|EKL60171.1| ribosomal protein L28 [Acinetobacter baumannii OIFC110]
gi|409988367|gb|EKO44539.1| 50S ribosomal protein L28 [Acinetobacter baumannii AC30]
gi|410381335|gb|EKP33901.1| ribosomal protein L28 [Acinetobacter baumannii OIFC065]
gi|410383374|gb|EKP35907.1| ribosomal protein L28 [Acinetobacter baumannii OIFC099]
gi|410388370|gb|EKP40809.1| ribosomal protein L28 [Acinetobacter baumannii OIFC087]
gi|410393379|gb|EKP45733.1| ribosomal protein L28 [Acinetobacter baumannii OIFC111]
gi|410397798|gb|EKP50038.1| ribosomal protein L28 [Acinetobacter baumannii Naval-21]
gi|410399181|gb|EKP51378.1| ribosomal protein L28 [Acinetobacter baumannii Naval-82]
gi|410400698|gb|EKP52866.1| ribosomal protein L28 [Acinetobacter baumannii Naval-2]
gi|410406893|gb|EKP58889.1| ribosomal protein L28 [Acinetobacter baumannii Canada BC1]
gi|410407925|gb|EKP59900.1| ribosomal protein L28 [Acinetobacter baumannii WC-A-694]
gi|410416099|gb|EKP67874.1| ribosomal protein L28 [Acinetobacter baumannii OIFC035]
gi|422942131|gb|EKU37192.1| ribosomal protein L28 [Acinetobacter baumannii WC-141]
gi|425489250|gb|EKU55562.1| ribosomal protein L28 [Acinetobacter baumannii WC-348]
gi|425490602|gb|EKU56899.1| ribosomal protein L28 [Acinetobacter baumannii WC-487]
gi|425499992|gb|EKU66020.1| ribosomal protein L28 [Acinetobacter baumannii Naval-113]
gi|425700038|gb|EKU69629.1| ribosomal protein L28 [Acinetobacter baumannii WC-136]
gi|444753996|gb|ELW78632.1| ribosomal protein L28 [Acinetobacter baumannii OIFC021]
gi|444759791|gb|ELW84253.1| ribosomal protein L28 [Acinetobacter baumannii WC-A-92]
gi|444769841|gb|ELW94009.1| ribosomal protein L28 [Acinetobacter baumannii AA-014]
gi|444770243|gb|ELW94400.1| ribosomal protein L28 [Acinetobacter baumannii Naval-78]
gi|444775895|gb|ELW99951.1| ribosomal protein L28 [Acinetobacter baumannii OIFC047]
gi|444779293|gb|ELX03287.1| ribosomal protein L28 [Acinetobacter baumannii OIFC338]
gi|444783479|gb|ELX07338.1| ribosomal protein L28 [Acinetobacter baumannii Naval-57]
gi|452955721|gb|EME61118.1| 50S ribosomal protein L28 [Acinetobacter baumannii MSP4-16]
Length = 78
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R ++PN+ R + R +R+++TT +R IDK G
Sbjct: 8 TGKRPVVGNNVSH-ANNKTKRRFEPNLHHHRFWLESEKRFVRLRLTTKGMRIIDKLG 63
>gi|390937212|ref|YP_006394771.1| 50S ribosomal protein L28 [Bifidobacterium bifidum BGN4]
gi|389890825|gb|AFL04892.1| ribosomal protein L28 [Bifidobacterium bifidum BGN4]
Length = 98
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
+K+ G GNRVS KTRR + PN+Q KR + + RH+ + V+ ++ ID
Sbjct: 2 SKQCQILGTRASTGNRVSHSH-RKTRRRFNPNLQTKRYWVPSLGRHVTLTVSVKGMKTID 60
Query: 104 KAG 106
+ G
Sbjct: 61 RIG 63
>gi|163787977|ref|ZP_02182423.1| uridine kinase [Flavobacteriales bacterium ALC-1]
gi|159876297|gb|EDP70355.1| uridine kinase [Flavobacteriales bacterium ALC-1]
Length = 78
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + N+ +KR F D+ + +KV+T AL+ I+K G
Sbjct: 7 LTGKKAMVGNNVSH-AMNKTKRKFNANLVKKRFFIPEEDKWVTLKVSTSALKTINKIG 63
>gi|381197041|ref|ZP_09904382.1| 50S ribosomal protein L28 [Acinetobacter lwoffii WJ10621]
Length = 78
Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R ++PN+ R + R +R+++TT +R IDK G
Sbjct: 8 TGKRPVVGNNVSH-ANNKTKRRFEPNLHHHRFWLESEKRFVRLRLTTKGMRIIDKLG 63
>gi|359424702|ref|ZP_09215814.1| 50S ribosomal protein L28 [Gordonia amarae NBRC 15530]
gi|358239999|dbj|GAB05396.1| 50S ribosomal protein L28 [Gordonia amarae NBRC 15530]
Length = 78
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G+ FG +VS TRR W PN+Q +R + DR++ ++V+ ++ ID+ G
Sbjct: 7 VTGRSPGFGKQVSHSHKRTTRR-WNPNIQRRRYYLPAEDRYVTLRVSAKGIKTIDRDG 63
>gi|227539205|ref|ZP_03969254.1| ribosomal protein L28 [Sphingobacterium spiritivorum ATCC 33300]
gi|300770679|ref|ZP_07080558.1| 50S ribosomal protein L28 [Sphingobacterium spiritivorum ATCC
33861]
gi|227240887|gb|EEI90902.1| ribosomal protein L28 [Sphingobacterium spiritivorum ATCC 33300]
gi|300763155|gb|EFK59972.1| 50S ribosomal protein L28 [Sphingobacterium spiritivorum ATCC
33861]
Length = 77
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK G RVS KT+R + PN+Q KR F +R I +KV+T A++ I+K G
Sbjct: 7 LTGKTALNGYRVSNSNA-KTKRKFYPNLQTKRFFIPEENRWITLKVSTSAIKTINKNG 63
>gi|26991958|ref|NP_747383.1| 50S ribosomal protein L28 [Pseudomonas putida KT2440]
gi|148550392|ref|YP_001270494.1| 50S ribosomal protein L28 [Pseudomonas putida F1]
gi|167036319|ref|YP_001671550.1| 50S ribosomal protein L28 [Pseudomonas putida GB-1]
gi|325273179|ref|ZP_08139469.1| 50S ribosomal protein L28 [Pseudomonas sp. TJI-51]
gi|386014551|ref|YP_005932828.1| RpmB [Pseudomonas putida BIRD-1]
gi|395446175|ref|YP_006386428.1| 50S ribosomal protein L28 [Pseudomonas putida ND6]
gi|397695543|ref|YP_006533426.1| 50S ribosomal protein L28 [Pseudomonas putida DOT-T1E]
gi|421523304|ref|ZP_15969934.1| 50S ribosomal protein L28 [Pseudomonas putida LS46]
gi|38258487|sp|Q88C99.1|RL28_PSEPK RecName: Full=50S ribosomal protein L28
gi|166226605|sp|A5WB00.1|RL28_PSEP1 RecName: Full=50S ribosomal protein L28
gi|189029451|sp|B0KQ85.1|RL28_PSEPG RecName: Full=50S ribosomal protein L28
gi|24987087|gb|AAN70847.1|AE016729_5 ribosomal protein L28 [Pseudomonas putida KT2440]
gi|148514450|gb|ABQ81310.1| LSU ribosomal protein L28P [Pseudomonas putida F1]
gi|166862807|gb|ABZ01215.1| ribosomal protein L28 [Pseudomonas putida GB-1]
gi|313501257|gb|ADR62623.1| RpmB [Pseudomonas putida BIRD-1]
gi|324101686|gb|EGB99242.1| 50S ribosomal protein L28 [Pseudomonas sp. TJI-51]
gi|388560172|gb|AFK69313.1| 50S ribosomal protein L28 [Pseudomonas putida ND6]
gi|397332273|gb|AFO48632.1| 50S ribosomal protein L28 [Pseudomonas putida DOT-T1E]
gi|402752873|gb|EJX13377.1| 50S ribosomal protein L28 [Pseudomonas putida LS46]
Length = 78
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN +S NKTRR + PN+Q R + R +R++V+ +R IDK GID
Sbjct: 8 TGKGPVTGNNISH-ANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIIDKR-GID 65
Query: 110 EYLL 113
L+
Sbjct: 66 AVLV 69
>gi|404260627|ref|ZP_10963907.1| 50S ribosomal protein L28 [Gordonia namibiensis NBRC 108229]
gi|409392608|ref|ZP_11244162.1| 50S ribosomal protein L28 [Gordonia rubripertincta NBRC 101908]
gi|403197551|dbj|GAB87396.1| 50S ribosomal protein L28 [Gordonia rubripertincta NBRC 101908]
gi|403400814|dbj|GAC02317.1| 50S ribosomal protein L28 [Gordonia namibiensis NBRC 108229]
Length = 78
Score = 40.4 bits (93), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R G+ FG +VS +T R W PN+Q KR F R+I ++V+ + ID
Sbjct: 2 SRRCQVTGREPGFGKQVSHSH-RRTSRRWDPNIQRKRYFVPSEGRYITLRVSAKGISTID 60
Query: 104 KAGGIDEYLLKT 115
+ G E +L+T
Sbjct: 61 RHG--IESVLRT 70
>gi|195114360|ref|XP_002001735.1| GI15386 [Drosophila mojavensis]
gi|193912310|gb|EDW11177.1| GI15386 [Drosophila mojavensis]
Length = 300
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%)
Query: 32 KCVPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIR 91
+ +P I + +G++ G+ + G + E + W P ++ + S +++ ++
Sbjct: 70 QSIPFPLIDTPESHQGIWGGEAVIKGFQKRESTKRRVPHFWVPTLRRSVVHSQVLNEYMS 129
Query: 92 VKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEK 134
V VT L I + G D YLLK + + + L K KI K
Sbjct: 130 VVVTERTLEQIHECHGFDHYLLKNLACDLRSALALKLKRKILK 172
>gi|419955815|ref|ZP_14471937.1| 50S ribosomal protein L28 [Pseudomonas stutzeri TS44]
gi|387967411|gb|EIK51714.1| 50S ribosomal protein L28 [Pseudomonas stutzeri TS44]
Length = 78
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN +S NKTRR + PN+Q R + R +R++V+ +R IDK GID
Sbjct: 8 TGKGPVTGNNISH-ANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRVIDKR-GID 65
Query: 110 EYL 112
L
Sbjct: 66 AVL 68
>gi|401883066|gb|EJT47302.1| hypothetical protein A1Q1_03931 [Trichosporon asahii var. asahii
CBS 2479]
Length = 164
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 25/94 (26%)
Query: 67 KTRRNWKPNVQEKRL--------------------FSYIMDRHI-RVKVTTHALRCIDKA 105
KTRRNWKPNV + ++ H+ RVK+ + +DKA
Sbjct: 40 KTRRNWKPNVHIMNMPVNILGGAPTIAQNLANLNESKFVRGPHLKRVKLAARDKKTVDKA 99
Query: 106 GGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEEL 139
GG++ LL P K+ T G +T +L+ EL
Sbjct: 100 GGVEGLLLSLPASKL-TPYGQLLRT---ELFREL 129
>gi|262374142|ref|ZP_06067419.1| ribosomal protein L28 [Acinetobacter junii SH205]
gi|359427728|ref|ZP_09218773.1| 50S ribosomal protein L28 [Acinetobacter sp. NBRC 100985]
gi|402756690|ref|ZP_10858946.1| 50S ribosomal protein L28 [Acinetobacter sp. NCTC 7422]
gi|406037530|ref|ZP_11044894.1| 50S ribosomal protein L28 [Acinetobacter parvus DSM 16617 = CIP
108168]
gi|425746126|ref|ZP_18864158.1| ribosomal protein L28 [Acinetobacter baumannii WC-323]
gi|262311153|gb|EEY92240.1| ribosomal protein L28 [Acinetobacter junii SH205]
gi|358236795|dbj|GAB00312.1| 50S ribosomal protein L28 [Acinetobacter sp. NBRC 100985]
gi|425486775|gb|EKU53140.1| ribosomal protein L28 [Acinetobacter baumannii WC-323]
Length = 78
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R ++PN+ R + R +R+++TT +R IDK G
Sbjct: 8 TGKRPIVGNNVSH-ANNKTKRRFEPNLHHHRFWLESEKRFVRLRLTTKGMRIIDKLG 63
>gi|255536299|ref|YP_003096670.1| 50S ribosomal protein L28p [Flavobacteriaceae bacterium 3519-10]
gi|255342495|gb|ACU08608.1| LSU ribosomal protein L28p [Flavobacteriaceae bacterium 3519-10]
Length = 95
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R ++ N+ EK+ + ++ + +KV+ H LR I+K G
Sbjct: 21 ITGKRAMVGNNVSH-ANNKTKRRFEINLLEKKFYLPEQEKSVTLKVSAHGLRIINKVG 77
>gi|118602956|ref|YP_904171.1| 50S ribosomal protein L28 [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|166226615|sp|A1AXP3.1|RL28_RUTMC RecName: Full=50S ribosomal protein L28
gi|118567895|gb|ABL02700.1| LSU ribosomal protein L28P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 78
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK + GK GN VS N+TRR + PN+ R + +R +++K++ LR ID
Sbjct: 2 AKVCVVTGKRPISGNNVSH-ANNRTRRRFYPNLHTHRFWVENENRFVKLKLSAKGLRIID 60
Query: 104 KAGGIDEYLLK 114
K GID L K
Sbjct: 61 KK-GIDTVLAK 70
>gi|431795960|ref|YP_007222864.1| 50S ribosomal protein L28 [Echinicola vietnamensis DSM 17526]
gi|430786725|gb|AGA76854.1| ribosomal protein L28 [Echinicola vietnamensis DSM 17526]
Length = 80
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK + GN VS NKT+R + PN+ +K + D I +KV++ ALR I+
Sbjct: 2 AKVCDITGKRPRVGNNVSH-ANNKTKRKFYPNLHKKSFYVPEEDAWITLKVSSKALRTIN 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|50843596|ref|YP_056823.1| 50S ribosomal protein L28 [Propionibacterium acnes KPA171202]
gi|282854930|ref|ZP_06264264.1| ribosomal protein L28 [Propionibacterium acnes J139]
gi|289426052|ref|ZP_06427799.1| ribosomal protein L28 [Propionibacterium acnes SK187]
gi|295131679|ref|YP_003582342.1| ribosomal protein L28 [Propionibacterium acnes SK137]
gi|335050937|ref|ZP_08543882.1| ribosomal protein L28 [Propionibacterium sp. 409-HC1]
gi|335053073|ref|ZP_08545926.1| ribosomal protein L28 [Propionibacterium sp. 434-HC2]
gi|342212341|ref|ZP_08705066.1| ribosomal protein L28 [Propionibacterium sp. CC003-HC2]
gi|365963779|ref|YP_004945345.1| 50S ribosomal protein L28 [Propionibacterium acnes TypeIA2 P.acn31]
gi|365966019|ref|YP_004947584.1| 50S ribosomal protein L28 [Propionibacterium acnes TypeIA2 P.acn17]
gi|365974958|ref|YP_004956517.1| 50S ribosomal protein L28 [Propionibacterium acnes TypeIA2 P.acn33]
gi|386070332|ref|YP_005985228.1| 50S ribosomal protein L28 [Propionibacterium acnes ATCC 11828]
gi|387504514|ref|YP_005945743.1| 50S ribosomal protein L28 [Propionibacterium acnes 6609]
gi|407936526|ref|YP_006852168.1| 50S ribosomal protein L28 [Propionibacterium acnes C1]
gi|417930685|ref|ZP_12574059.1| ribosomal protein L28 [Propionibacterium acnes SK182]
gi|419420035|ref|ZP_13960264.1| 50S ribosomal protein L28 [Propionibacterium acnes PRP-38]
gi|422386572|ref|ZP_16466689.1| ribosomal protein L28 [Propionibacterium acnes HL096PA2]
gi|422391853|ref|ZP_16471928.1| ribosomal protein L28 [Propionibacterium acnes HL099PA1]
gi|422394432|ref|ZP_16474473.1| ribosomal protein L28 [Propionibacterium acnes HL097PA1]
gi|422423748|ref|ZP_16500699.1| ribosomal protein L28 [Propionibacterium acnes HL043PA1]
gi|422426422|ref|ZP_16503344.1| ribosomal protein L28 [Propionibacterium acnes HL087PA1]
gi|422431623|ref|ZP_16508496.1| ribosomal protein L28 [Propionibacterium acnes HL059PA2]
gi|422434120|ref|ZP_16510982.1| ribosomal protein L28 [Propionibacterium acnes HL083PA2]
gi|422442231|ref|ZP_16519035.1| ribosomal protein L28 [Propionibacterium acnes HL002PA1]
gi|422445042|ref|ZP_16521798.1| ribosomal protein L28 [Propionibacterium acnes HL027PA1]
gi|422452562|ref|ZP_16529260.1| ribosomal protein L28 [Propionibacterium acnes HL087PA3]
gi|422455212|ref|ZP_16531888.1| ribosomal protein L28 [Propionibacterium acnes HL030PA1]
gi|422458302|ref|ZP_16534958.1| ribosomal protein L28 [Propionibacterium acnes HL050PA2]
gi|422462327|ref|ZP_16538950.1| ribosomal protein L28 [Propionibacterium acnes HL038PA1]
gi|422465719|ref|ZP_16542311.1| ribosomal protein L28 [Propionibacterium acnes HL110PA4]
gi|422469647|ref|ZP_16546169.1| ribosomal protein L28 [Propionibacterium acnes HL110PA3]
gi|422475072|ref|ZP_16551534.1| ribosomal protein L28 [Propionibacterium acnes HL056PA1]
gi|422477094|ref|ZP_16553530.1| ribosomal protein L28 [Propionibacterium acnes HL007PA1]
gi|422483833|ref|ZP_16560215.1| ribosomal protein L28 [Propionibacterium acnes HL043PA2]
gi|422492664|ref|ZP_16568969.1| ribosomal protein L28 [Propionibacterium acnes HL086PA1]
gi|422494832|ref|ZP_16571126.1| ribosomal protein L28 [Propionibacterium acnes HL025PA1]
gi|422499305|ref|ZP_16575572.1| ribosomal protein L28 [Propionibacterium acnes HL063PA2]
gi|422510081|ref|ZP_16586230.1| ribosomal protein L28 [Propionibacterium acnes HL059PA1]
gi|422515207|ref|ZP_16591323.1| ribosomal protein L28 [Propionibacterium acnes HL110PA2]
gi|422519188|ref|ZP_16595250.1| ribosomal protein L28 [Propionibacterium acnes HL074PA1]
gi|422519901|ref|ZP_16595945.1| ribosomal protein L28 [Propionibacterium acnes HL045PA1]
gi|422522915|ref|ZP_16598931.1| ribosomal protein L28 [Propionibacterium acnes HL053PA2]
gi|422526556|ref|ZP_16602551.1| ribosomal protein L28 [Propionibacterium acnes HL083PA1]
gi|422528208|ref|ZP_16604192.1| ribosomal protein L28 [Propionibacterium acnes HL053PA1]
gi|422535653|ref|ZP_16611570.1| ribosomal protein L28 [Propionibacterium acnes HL078PA1]
gi|422538190|ref|ZP_16614065.1| ribosomal protein L28 [Propionibacterium acnes HL013PA1]
gi|422541926|ref|ZP_16617782.1| ribosomal protein L28 [Propionibacterium acnes HL037PA1]
gi|422543506|ref|ZP_16619351.1| ribosomal protein L28 [Propionibacterium acnes HL082PA1]
gi|422547010|ref|ZP_16622833.1| ribosomal protein L28 [Propionibacterium acnes HL050PA3]
gi|422549131|ref|ZP_16624935.1| ribosomal protein L28 [Propionibacterium acnes HL050PA1]
gi|422557458|ref|ZP_16633202.1| ribosomal protein L28 [Propionibacterium acnes HL025PA2]
gi|422560169|ref|ZP_16635867.1| ribosomal protein L28 [Propionibacterium acnes HL005PA1]
gi|422561913|ref|ZP_16637592.1| ribosomal protein L28 [Propionibacterium acnes HL046PA1]
gi|422570299|ref|ZP_16645900.1| ribosomal protein L28 [Propionibacterium acnes HL067PA1]
gi|422574870|ref|ZP_16650418.1| ribosomal protein L28 [Propionibacterium acnes HL001PA1]
gi|422577494|ref|ZP_16653024.1| ribosomal protein L28 [Propionibacterium acnes HL005PA4]
gi|67461385|sp|Q6A5U8.1|RL28_PROAC RecName: Full=50S ribosomal protein L28
gi|50841198|gb|AAT83865.1| 50S ribosomal protein L28 [Propionibacterium acnes KPA171202]
gi|282582076|gb|EFB87459.1| ribosomal protein L28 [Propionibacterium acnes J139]
gi|289153595|gb|EFD02309.1| ribosomal protein L28 [Propionibacterium acnes SK187]
gi|291376781|gb|ADE00636.1| ribosomal protein L28 [Propionibacterium acnes SK137]
gi|313765615|gb|EFS36979.1| ribosomal protein L28 [Propionibacterium acnes HL013PA1]
gi|313771824|gb|EFS37790.1| ribosomal protein L28 [Propionibacterium acnes HL074PA1]
gi|313802950|gb|EFS44161.1| ribosomal protein L28 [Propionibacterium acnes HL110PA2]
gi|313810684|gb|EFS48398.1| ribosomal protein L28 [Propionibacterium acnes HL083PA1]
gi|313813722|gb|EFS51436.1| ribosomal protein L28 [Propionibacterium acnes HL025PA1]
gi|313816596|gb|EFS54310.1| ribosomal protein L28 [Propionibacterium acnes HL059PA1]
gi|313829673|gb|EFS67387.1| ribosomal protein L28 [Propionibacterium acnes HL063PA2]
gi|313831494|gb|EFS69208.1| ribosomal protein L28 [Propionibacterium acnes HL007PA1]
gi|313833456|gb|EFS71170.1| ribosomal protein L28 [Propionibacterium acnes HL056PA1]
gi|313839416|gb|EFS77130.1| ribosomal protein L28 [Propionibacterium acnes HL086PA1]
gi|314916637|gb|EFS80468.1| ribosomal protein L28 [Propionibacterium acnes HL005PA4]
gi|314918904|gb|EFS82735.1| ribosomal protein L28 [Propionibacterium acnes HL050PA1]
gi|314920915|gb|EFS84746.1| ribosomal protein L28 [Propionibacterium acnes HL050PA3]
gi|314924411|gb|EFS88242.1| ribosomal protein L28 [Propionibacterium acnes HL001PA1]
gi|314931407|gb|EFS95238.1| ribosomal protein L28 [Propionibacterium acnes HL067PA1]
gi|314956634|gb|EFT00886.1| ribosomal protein L28 [Propionibacterium acnes HL027PA1]
gi|314959514|gb|EFT03616.1| ribosomal protein L28 [Propionibacterium acnes HL002PA1]
gi|314964710|gb|EFT08810.1| ribosomal protein L28 [Propionibacterium acnes HL082PA1]
gi|314968886|gb|EFT12984.1| ribosomal protein L28 [Propionibacterium acnes HL037PA1]
gi|314974811|gb|EFT18906.1| ribosomal protein L28 [Propionibacterium acnes HL053PA1]
gi|314977862|gb|EFT21956.1| ribosomal protein L28 [Propionibacterium acnes HL045PA1]
gi|314981661|gb|EFT25754.1| ribosomal protein L28 [Propionibacterium acnes HL110PA3]
gi|314984728|gb|EFT28820.1| ribosomal protein L28 [Propionibacterium acnes HL005PA1]
gi|315079353|gb|EFT51354.1| ribosomal protein L28 [Propionibacterium acnes HL053PA2]
gi|315082404|gb|EFT54380.1| ribosomal protein L28 [Propionibacterium acnes HL078PA1]
gi|315092300|gb|EFT64276.1| ribosomal protein L28 [Propionibacterium acnes HL110PA4]
gi|315095631|gb|EFT67607.1| ribosomal protein L28 [Propionibacterium acnes HL038PA1]
gi|315100282|gb|EFT72258.1| ribosomal protein L28 [Propionibacterium acnes HL059PA2]
gi|315102421|gb|EFT74397.1| ribosomal protein L28 [Propionibacterium acnes HL046PA1]
gi|315104670|gb|EFT76646.1| ribosomal protein L28 [Propionibacterium acnes HL050PA2]
gi|315107723|gb|EFT79699.1| ribosomal protein L28 [Propionibacterium acnes HL030PA1]
gi|327332918|gb|EGE74650.1| ribosomal protein L28 [Propionibacterium acnes HL096PA2]
gi|327335323|gb|EGE77033.1| ribosomal protein L28 [Propionibacterium acnes HL097PA1]
gi|327448621|gb|EGE95275.1| ribosomal protein L28 [Propionibacterium acnes HL043PA1]
gi|327451152|gb|EGE97806.1| ribosomal protein L28 [Propionibacterium acnes HL043PA2]
gi|327455738|gb|EGF02393.1| ribosomal protein L28 [Propionibacterium acnes HL087PA3]
gi|327458087|gb|EGF04742.1| ribosomal protein L28 [Propionibacterium acnes HL083PA2]
gi|328757247|gb|EGF70863.1| ribosomal protein L28 [Propionibacterium acnes HL087PA1]
gi|328757633|gb|EGF71249.1| ribosomal protein L28 [Propionibacterium acnes HL025PA2]
gi|328761968|gb|EGF75475.1| ribosomal protein L28 [Propionibacterium acnes HL099PA1]
gi|333768078|gb|EGL45284.1| ribosomal protein L28 [Propionibacterium sp. 434-HC2]
gi|333768509|gb|EGL45691.1| ribosomal protein L28 [Propionibacterium sp. 409-HC1]
gi|335278559|gb|AEH30464.1| ribosomal protein L28 [Propionibacterium acnes 6609]
gi|340767885|gb|EGR90410.1| ribosomal protein L28 [Propionibacterium sp. CC003-HC2]
gi|340769590|gb|EGR92112.1| ribosomal protein L28 [Propionibacterium acnes SK182]
gi|353454698|gb|AER05217.1| ribosomal protein L28 [Propionibacterium acnes ATCC 11828]
gi|365740460|gb|AEW84662.1| ribosomal protein L28 [Propionibacterium acnes TypeIA2 P.acn31]
gi|365742700|gb|AEW82394.1| ribosomal protein L28 [Propionibacterium acnes TypeIA2 P.acn17]
gi|365744957|gb|AEW80154.1| ribosomal protein L28 [Propionibacterium acnes TypeIA2 P.acn33]
gi|379978409|gb|EIA11733.1| 50S ribosomal protein L28 [Propionibacterium acnes PRP-38]
gi|407905107|gb|AFU41937.1| 50S ribosomal protein L28 [Propionibacterium acnes C1]
gi|456739229|gb|EMF63796.1| 50S ribosomal protein L28 [Propionibacterium acnes FZ1/2/0]
Length = 78
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R G +FGN VS + T+R W PN+Q+KR + + R + + +T A++ ID
Sbjct: 2 SRRCQVRGTKPEFGNNVSHSQRH-TKRRWNPNIQKKRYWVPSLGRKVTLTLTPKAIKEID 60
Query: 104 KAG 106
+ G
Sbjct: 61 RRG 63
>gi|400292631|ref|ZP_10794558.1| ribosomal protein L28 [Actinomyces naeslundii str. Howell 279]
gi|399902216|gb|EJN85044.1| ribosomal protein L28 [Actinomyces naeslundii str. Howell 279]
Length = 121
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G FG VS +T R W PN+Q KR + + R +R+ V+ +R IDK G
Sbjct: 49 VTGARPVFGRSVSHSH-KRTPRRWDPNLQRKRYWVPSLGRTVRLTVSAKGIRTIDKLG 105
>gi|443473923|ref|ZP_21063944.1| LSU ribosomal protein L28p [Pseudomonas pseudoalcaligenes KF707]
gi|442904858|gb|ELS29773.1| LSU ribosomal protein L28p [Pseudomonas pseudoalcaligenes KF707]
Length = 78
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN +S NKTRR + PN+Q R + R +R++V+ +R IDK GID
Sbjct: 8 TGKGPVTGNNISH-ANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIIDKR-GID 65
Query: 110 EYL 112
L
Sbjct: 66 AVL 68
>gi|390951510|ref|YP_006415269.1| 50S ribosomal protein L28 [Thiocystis violascens DSM 198]
gi|390428079|gb|AFL75144.1| LSU ribosomal protein L28P [Thiocystis violascens DSM 198]
Length = 78
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKT+R + PN+ E R + R ++++V+ + +R IDK GID
Sbjct: 8 TGKRPLTGNNVSH-ANNKTKRRFLPNLHEHRFWVAAEKRFVKLRVSANGMRIIDKK-GID 65
Query: 110 EYL 112
L
Sbjct: 66 TVL 68
>gi|302527617|ref|ZP_07279959.1| ribosomal protein L28 [Streptomyces sp. AA4]
gi|302436512|gb|EFL08328.1| ribosomal protein L28 [Streptomyces sp. AA4]
Length = 78
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
G+ +G +VS +T R W+PN+Q +R + + R +R+KV+ ++ IDK GI
Sbjct: 7 VTGRKPGYGKQVSHSH-RRTSRRWEPNLQTRRYYVPSLGRTVRLKVSAKGMKTIDKR-GI 64
Query: 109 DEYL 112
D +
Sbjct: 65 DAVV 68
>gi|329120724|ref|ZP_08249386.1| 50S ribosomal protein L28 [Neisseria bacilliformis ATCC BAA-1200]
gi|327460521|gb|EGF06857.1| 50S ribosomal protein L28 [Neisseria bacilliformis ATCC BAA-1200]
Length = 65
Score = 40.0 bits (92), Expect = 0.62, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GN VS NKT+R + PN+Q +R + +R +R++V+ LR IDK G
Sbjct: 3 GNNVSH-ANNKTKRRFLPNLQTRRFWVESENRWVRLRVSNAGLRTIDKLG 51
>gi|84996331|ref|XP_952887.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65303884|emb|CAI76263.1| hypothetical protein, conserved [Theileria annulata]
Length = 278
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 67 KTRRNWKPNVQEKRLFSYIMDRHI-RVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
KTR KP V +K S +++ + V+VTT AL I +GG D Y+L T ++ ++MG
Sbjct: 67 KTRIKLKPLVFKKDFESKLLNTTVPNVRVTTSALHAITSSGGFDNYILNTSPEQLRSQMG 126
>gi|409427120|ref|ZP_11261647.1| 50S ribosomal protein L28 [Pseudomonas sp. HYS]
Length = 78
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN +S NKTRR + PN+Q R + R +R++V+ +R IDK GID
Sbjct: 8 TGKGPVTGNNISH-ANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIIDKR-GID 65
Query: 110 EYLL 113
L+
Sbjct: 66 AVLV 69
>gi|295133100|ref|YP_003583776.1| 50S ribosomal protein L28 [Zunongwangia profunda SM-A87]
gi|294981115|gb|ADF51580.1| 50S ribosomal protein L28 [Zunongwangia profunda SM-A87]
Length = 79
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + N+ +KR F D+ I +KV+T AL+ I+K G
Sbjct: 7 LTGKKAMVGNNVSH-AMNKTKRKFNANLVKKRFFIPEEDKWITLKVSTSALKNINKKG 63
>gi|440748703|ref|ZP_20927954.1| LSU ribosomal protein L28p [Mariniradius saccharolyticus AK6]
gi|436482827|gb|ELP38915.1| LSU ribosomal protein L28p [Mariniradius saccharolyticus AK6]
Length = 80
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK + GN VS NKT+R + PN+ +K+ + D I +KV T AL+ I+
Sbjct: 2 AKVCDITGKTPRTGNNVSH-ANNKTKRKFYPNLHKKKFYIPEEDAWITLKVCTSALKTIN 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|269796915|ref|YP_003316370.1| 50S ribosomal protein L28P [Sanguibacter keddieii DSM 10542]
gi|269099100|gb|ACZ23536.1| LSU ribosomal protein L28P [Sanguibacter keddieii DSM 10542]
Length = 78
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 56 FGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
FG+ +S +T+R + PN+Q+KR + + RH+ ++V+ L+ IDK G
Sbjct: 14 FGHTISHSH-VRTKRRFNPNIQKKRFWVPSLGRHVTLRVSARGLKTIDKLG 63
>gi|189499571|ref|YP_001959041.1| 50S ribosomal protein L28 [Chlorobium phaeobacteroides BS1]
gi|226738050|sp|B3EMT2.1|RL28_CHLPB RecName: Full=50S ribosomal protein L28
gi|189495012|gb|ACE03560.1| ribosomal protein L28 [Chlorobium phaeobacteroides BS1]
Length = 72
Score = 40.0 bits (92), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
+K + GK +GN VS N+TR+ ++PN+ KR++ R ++V+V+ A++ +
Sbjct: 2 SKVCILTGKRPTYGNNVSH-ANNRTRKRFEPNLHTKRIWVEEEKRWVKVRVSAKAMKIMS 60
Query: 104 KAG 106
K G
Sbjct: 61 KTG 63
>gi|116328129|ref|YP_797849.1| 50S ribosomal protein L28 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116331418|ref|YP_801136.1| 50S ribosomal protein L28 [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|122280837|sp|Q04RU2.1|RL28_LEPBJ RecName: Full=50S ribosomal protein L28
gi|122284079|sp|Q051S9.1|RL28_LEPBL RecName: Full=50S ribosomal protein L28
gi|116120873|gb|ABJ78916.1| 50S Ribosomal protein L28 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116125107|gb|ABJ76378.1| 50S Ribosomal protein L28 [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 94
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R G+ GN VS KTRR WK N+ +KR+F +R + ++++T ALR +
Sbjct: 2 ARRCEVTGRGTVSGNNVSHSH-IKTRRTWKVNLIKKRIFLEDENRWVTIRLSTRALRTLR 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|378823747|ref|ZP_09846341.1| ribosomal protein L28 [Sutterella parvirubra YIT 11816]
gi|378597435|gb|EHY30729.1| ribosomal protein L28 [Sutterella parvirubra YIT 11816]
Length = 65
Score = 40.0 bits (92), Expect = 0.67, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G+RVS NKT+R + PN+Q +R + +R +R+++T LR +DK G
Sbjct: 3 GHRVSH-ANNKTKRRFMPNLQYRRFWVESENRWVRLRLTNAGLRTVDKIG 51
>gi|372267868|ref|ZP_09503916.1| 50S ribosomal protein L28 [Alteromonas sp. S89]
Length = 78
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS N+T+R + PN+Q R + R ++++V+T +R IDK GID
Sbjct: 8 TGKRPVTGNNVSH-AKNRTKRRFVPNLQSHRFWVEAEKRFVKLRVSTKGMRIIDKK-GID 65
Query: 110 EYL 112
L
Sbjct: 66 TVL 68
>gi|409396623|ref|ZP_11247603.1| 50S ribosomal protein L28 [Pseudomonas sp. Chol1]
gi|409118805|gb|EKM95196.1| 50S ribosomal protein L28 [Pseudomonas sp. Chol1]
Length = 78
Score = 40.0 bits (92), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN +S NKTRR + PN+Q R + +R +R++++ +R IDK GID
Sbjct: 8 TGKGPVTGNNISH-ANNKTRRRFLPNLQHHRFWVESENRFVRLRLSAKGMRIIDKR-GID 65
Query: 110 EYL 112
L
Sbjct: 66 AVL 68
>gi|431929293|ref|YP_007242327.1| 50S ribosomal protein L28 [Pseudomonas stutzeri RCH2]
gi|431827580|gb|AGA88697.1| LSU ribosomal protein L28P [Pseudomonas stutzeri RCH2]
Length = 78
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKTRR + PN+Q R + +R +R++++ +R IDK GID
Sbjct: 8 TGKGPVTGNNVSH-ANNKTRRRFLPNLQHHRFWVESENRFVRLRLSAKGMRIIDKR-GID 65
Query: 110 EYL 112
L
Sbjct: 66 VVL 68
>gi|456887871|gb|EMF98884.1| ribosomal protein L28 [Leptospira borgpetersenii str. 200701203]
Length = 94
Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R G+ GN VS KTRR WK N+ +KR+F +R + ++++T ALR +
Sbjct: 2 ARRCEVTGRGTVSGNNVSHSH-IKTRRTWKVNLIKKRIFLEDENRWVTIRLSTRALRTLR 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|408827023|ref|ZP_11211913.1| 50S ribosomal protein L28 [Streptomyces somaliensis DSM 40738]
Length = 78
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G FGNRVS +T R + PN+Q KR + RH+R+ ++ A++ ID G
Sbjct: 7 LTGAQPGFGNRVSHSH-RRTSRRFDPNIQRKRYWLPSEGRHVRLTLSARAVKTIDTIG 63
>gi|404422852|ref|ZP_11004525.1| 50S ribosomal protein L28 [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
gi|403655725|gb|EJZ10567.1| 50S ribosomal protein L28 [Mycobacterium fortuitum subsp. fortuitum
DSM 46621]
Length = 78
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G+ FGN VS ++RR W PN+Q K + R IR++V+ ++ ID+ G
Sbjct: 7 VTGRSPGFGNTVSHSH-KRSRRRWNPNIQTKTYYLPSEGRRIRLRVSAKGIKVIDRDG 63
>gi|24214862|ref|NP_712343.1| 50S ribosomal protein L28 [Leptospira interrogans serovar Lai str.
56601]
gi|45657626|ref|YP_001712.1| 50S ribosomal protein L28 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|359726508|ref|ZP_09265204.1| 50S ribosomal protein L28 [Leptospira weilii str. 2006001855]
gi|386074220|ref|YP_005988537.1| 50S ribosomal protein L28 [Leptospira interrogans serovar Lai str.
IPAV]
gi|421097594|ref|ZP_15558279.1| ribosomal protein L28 [Leptospira borgpetersenii str. 200901122]
gi|67461465|sp|Q72RI5.1|RL28_LEPIC RecName: Full=50S ribosomal protein L28
gi|67461531|sp|Q8F483.1|RL28_LEPIN RecName: Full=50S ribosomal protein L28
gi|24195881|gb|AAN49361.1| 50S ribosomal protein L28 [Leptospira interrogans serovar Lai str.
56601]
gi|45600866|gb|AAS70349.1| 50S ribosomal protein L28 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353458009|gb|AER02554.1| 50S ribosomal protein L28 [Leptospira interrogans serovar Lai str.
IPAV]
gi|410799421|gb|EKS01496.1| ribosomal protein L28 [Leptospira borgpetersenii str. 200901122]
gi|455669051|gb|EMF34219.1| ribosomal protein L28 [Leptospira interrogans serovar Pomona str.
Fox 32256]
gi|456821462|gb|EMF69968.1| ribosomal protein L28 [Leptospira interrogans serovar Canicola str.
LT1962]
gi|456865432|gb|EMF83766.1| ribosomal protein L28 [Leptospira weilii serovar Topaz str. LT2116]
gi|456967077|gb|EMG08517.1| ribosomal protein L28 [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 94
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R G+ GN VS KTRR WK N+ +KR+F +R + ++++T ALR +
Sbjct: 2 ARRCEVTGRGTVSGNNVSHSH-IKTRRTWKVNLIKKRIFLEDENRWVTIRLSTRALRTLR 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|359689882|ref|ZP_09259883.1| 50S ribosomal protein L28 [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418748594|ref|ZP_13304886.1| ribosomal protein L28 [Leptospira licerasiae str. MMD4847]
gi|418757485|ref|ZP_13313672.1| ribosomal protein L28 [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|384115262|gb|EIE01520.1| ribosomal protein L28 [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|404275663|gb|EJZ42977.1| ribosomal protein L28 [Leptospira licerasiae str. MMD4847]
Length = 91
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCI 102
A++ + GK GN VS KTRR WK N+ +KR+F +R + V+++T ALR +
Sbjct: 2 ARKCVVTGKGTISGNNVSHSHL-KTRRTWKINLIKKRIFLEDENRWVTVRISTRALRTL 59
>gi|207742579|ref|YP_002258971.1| 50s ribosomal protein l28 [Ralstonia solanacearum IPO1609]
gi|421895435|ref|ZP_16325837.1| 50s ribosomal protein l28 [Ralstonia solanacearum MolK2]
gi|206586600|emb|CAQ17187.1| 50s ribosomal protein l28 [Ralstonia solanacearum MolK2]
gi|206593973|emb|CAQ60900.1| 50s ribosomal protein l28 [Ralstonia solanacearum IPO1609]
Length = 65
Score = 40.0 bits (92), Expect = 0.70, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYL 112
GN VS NKT+R + PN+Q +R + +R + ++V+ LR IDK GIDE L
Sbjct: 3 GNNVSH-ANNKTKRRFLPNLQNRRFWVESENRWVSLRVSNAGLRLIDKK-GIDEVL 56
>gi|451943603|ref|YP_007464239.1| 50S ribosomal protein L28 [Corynebacterium halotolerans YIM 70093 =
DSM 44683]
gi|451902990|gb|AGF71877.1| 50S ribosomal protein L28 [Corynebacterium halotolerans YIM 70093 =
DSM 44683]
Length = 78
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G+ QFG VS +T R W PNVQ +R + R + + V+T L+ ID+ G
Sbjct: 7 VTGRKPQFGKSVSHSH-RRTSRRWNPNVQRRRFYLPSEGRSVVLNVSTKGLKIIDRDG 63
>gi|153877669|ref|ZP_02004325.1| Ribosomal protein L28 [Beggiatoa sp. PS]
gi|152065867|gb|EDN65675.1| Ribosomal protein L28 [Beggiatoa sp. PS]
Length = 78
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + PN+ R + +R+I+++VTT +R IDK G
Sbjct: 8 TGKRPISGNNVSH-AHNKTKRRFLPNLHTHRFWVPDENRYIKLRVTTKGMRIIDKKG 63
>gi|444916272|ref|ZP_21236390.1| LSU ribosomal protein L28p [Cystobacter fuscus DSM 2262]
gi|444712395|gb|ELW53320.1| LSU ribosomal protein L28p [Cystobacter fuscus DSM 2262]
Length = 78
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKT+ PN+Q R + + R +R++V+ H +R I+K GID
Sbjct: 8 TGKRPLVGNNVSH-ANNKTKTRSLPNIQTHRFWVPSLGRFVRLRVSAHGIRIINKR-GID 65
Query: 110 EYL 112
+
Sbjct: 66 RVI 68
>gi|329945915|ref|ZP_08293602.1| ribosomal protein L28 [Actinomyces sp. oral taxon 170 str. F0386]
gi|328528363|gb|EGF55341.1| ribosomal protein L28 [Actinomyces sp. oral taxon 170 str. F0386]
Length = 82
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G FG VS +T R W PN+Q KR + + R +R+ V+ +R IDK G
Sbjct: 10 VTGTRPVFGRSVSHSH-KRTPRRWNPNLQRKRYWVPSLGRTVRLTVSAKGIRTIDKLG 66
>gi|157119277|ref|XP_001653335.1| mitochondrial ribosomal protein, L28, putative [Aedes aegypti]
gi|94469296|gb|ABF18497.1| mitochondrial ribosomal protein L28 [Aedes aegypti]
gi|108875389|gb|EAT39614.1| AAEL008601-PA [Aedes aegypti]
Length = 283
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 45/99 (45%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
VP I + +G++ G+ I G + + W P ++ + S +++ ++ V
Sbjct: 72 VPLPLIDPPESHQGIWGGEAIVKGFQKRNPYKRRVPHFWVPVLRRSVVHSQVLNEYMAVT 131
Query: 94 VTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKI 132
VT L I G D YLLKTP + + + + K K+
Sbjct: 132 VTDRTLDQIHDNHGFDHYLLKTPACDLRSMLAIKLKKKV 170
>gi|359686043|ref|ZP_09256044.1| 50S ribosomal protein L28 [Leptospira santarosai str. 2000030832]
gi|422005929|ref|ZP_16353081.1| 50S ribosomal protein L28 [Leptospira santarosai serovar Shermani
str. LT 821]
gi|417255384|gb|EKT84874.1| 50S ribosomal protein L28 [Leptospira santarosai serovar Shermani
str. LT 821]
gi|456876674|gb|EMF91753.1| ribosomal protein L28 [Leptospira santarosai str. ST188]
Length = 94
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
A+R G+ GN VS KTRR WK N+ +KR+F +R + ++++T ALR +
Sbjct: 2 ARRCEVTGRGTVSGNNVSHSH-IKTRRTWKINLIKKRIFLEDENRWVTIRLSTRALRTLR 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|339490012|ref|YP_004704540.1| 50S ribosomal protein L28 [Pseudomonas putida S16]
gi|421529755|ref|ZP_15976277.1| 50S ribosomal protein L28 [Pseudomonas putida S11]
gi|431805158|ref|YP_007232061.1| 50S ribosomal protein L28 [Pseudomonas putida HB3267]
gi|338840855|gb|AEJ15660.1| 50S ribosomal protein L28 [Pseudomonas putida S16]
gi|402212800|gb|EJT84175.1| 50S ribosomal protein L28 [Pseudomonas putida S11]
gi|430795923|gb|AGA76118.1| 50S ribosomal protein L28 [Pseudomonas putida HB3267]
Length = 78
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN +S NKTRR + PN+Q R + R +R++V+ +R IDK GID
Sbjct: 8 TGKGPVTGNNISH-ANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRVIDKR-GID 65
Query: 110 EYL 112
L
Sbjct: 66 VVL 68
>gi|406700335|gb|EKD03507.1| hypothetical protein A1Q2_02225 [Trichosporon asahii var. asahii
CBS 8904]
Length = 164
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 25/94 (26%)
Query: 67 KTRRNWKPNVQEKRL--------------------FSYIMDRHI-RVKVTTHALRCIDKA 105
KTRRNWKPNV + ++ H+ RVK+ + +DKA
Sbjct: 40 KTRRNWKPNVHIMNMPVNILGGAPTIAQNLANLNESKFVRGPHLKRVKLAARDKKTVDKA 99
Query: 106 GGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEEL 139
GG++ LL P K+ T G +T +L+ EL
Sbjct: 100 GGVEGLLLSLPASKL-TPYGQLLRT---ELFREL 129
>gi|327404678|ref|YP_004345516.1| 50S ribosomal protein L28P [Fluviicola taffensis DSM 16823]
gi|327320186|gb|AEA44678.1| LSU ribosomal protein L28P [Fluviicola taffensis DSM 16823]
Length = 78
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK + GN VS KT+R + PN+ K+ + D ++ +K++ ALR I+K G
Sbjct: 7 LTGKSVMVGNNVSHSN-RKTKRKFYPNLLTKKFYVPEDDMYVTLKISASALRTINKKG 63
>gi|195161266|ref|XP_002021489.1| GL26538 [Drosophila persimilis]
gi|198472480|ref|XP_001355947.2| GA17686 [Drosophila pseudoobscura pseudoobscura]
gi|194103289|gb|EDW25332.1| GL26538 [Drosophila persimilis]
gi|198139032|gb|EAL33006.2| GA17686 [Drosophila pseudoobscura pseudoobscura]
Length = 301
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
+P I + +G++ G+ + G + + + W P ++ + S +++ +I V
Sbjct: 72 IPLPLIDTPESHQGIWGGEAVIKGFQKRQQTKRRVPHFWVPQLRRSVVHSQVLNEYISVI 131
Query: 94 VTTHALRCIDKAGGIDEYLLKT 115
VT AL I + G D YLLK
Sbjct: 132 VTERALEQIHECHGFDHYLLKN 153
>gi|71028414|ref|XP_763850.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350804|gb|EAN31567.1| hypothetical protein, conserved [Theileria parva]
Length = 281
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHI-RVKVTTHALRCI 102
++ GL+ + + +VS KTR KP V +K S +++ + V+VTT AL I
Sbjct: 79 SQTGLYHDEDYNYYTKVSYSL-KKTRIKLKPLVFKKDFESKLLNTTVPNVRVTTSALHAI 137
Query: 103 DKAGGIDEYLLKTPYHKMDTEMG 125
+GG D Y+L T ++ ++MG
Sbjct: 138 TSSGGFDNYILNTFPEQLRSQMG 160
>gi|422564243|ref|ZP_16639903.1| ribosomal protein L28 [Propionibacterium acnes HL082PA2]
gi|314967206|gb|EFT11305.1| ribosomal protein L28 [Propionibacterium acnes HL082PA2]
Length = 105
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R G +FGN VS + T+R W PN+Q+KR + + R + + +T A++ ID
Sbjct: 2 SRRCQVRGTKPEFGNNVSHSQRH-TKRRWNPNIQKKRYWVPSLGRKVTLTLTPKAIKEID 60
Query: 104 KAG 106
+ G
Sbjct: 61 RRG 63
>gi|254515837|ref|ZP_05127897.1| ribosomal protein L28 [gamma proteobacterium NOR5-3]
gi|219675559|gb|EED31925.1| ribosomal protein L28 [gamma proteobacterium NOR5-3]
Length = 78
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS N+TRR + PN+ + R + R +R++V++ +R IDK GID
Sbjct: 8 TGKRPVTGNNVSH-AKNRTRRRFLPNLHQHRFWVESEKRFVRLRVSSKGMRIIDKK-GID 65
Query: 110 EYL 112
L
Sbjct: 66 SVL 68
>gi|120436590|ref|YP_862276.1| 50S ribosomal protein L28 [Gramella forsetii KT0803]
gi|166226577|sp|A0M3L4.1|RL28_GRAFK RecName: Full=50S ribosomal protein L28
gi|117578740|emb|CAL67209.1| 50S ribosomal protein L28 [Gramella forsetii KT0803]
Length = 79
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + N+ +KR F DR + +KV T AL+ I+K G
Sbjct: 7 LTGKRAMVGNNVSH-AMNKTKRKFNANLVKKRFFLPEEDRWVTLKVCTSALKDINKKG 63
>gi|397691798|ref|YP_006529052.1| 50S ribosomal protein L28 [Melioribacter roseus P3M]
gi|395813290|gb|AFN76039.1| 50S ribosomal protein L28 [Melioribacter roseus P3M]
Length = 79
Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 66 NKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
N+T+R + PN+Q+KR++ ++R + VK+TT ALR + K G
Sbjct: 23 NRTKRRFLPNLQKKRIWVKELNRFVTVKLTTSALRTLAKNG 63
>gi|268533978|ref|XP_002632119.1| Hypothetical protein CBG06974 [Caenorhabditis briggsae]
Length = 310
Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 74 PNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYHKMDTEMG 125
P ++ L S I+D++++V VT A+R ID+ G+D Y+LK+ +D++
Sbjct: 135 PALKTVVLHSEILDKYMKVTVTERAMRLIDENFGLDYYILKSKEIDLDSKFA 186
>gi|146280503|ref|YP_001170656.1| 50S ribosomal protein L28 [Pseudomonas stutzeri A1501]
gi|146309388|ref|YP_001189853.1| 50S ribosomal protein L28 [Pseudomonas mendocina ymp]
gi|330505618|ref|YP_004382487.1| 50S ribosomal protein L28 [Pseudomonas mendocina NK-01]
gi|386018767|ref|YP_005936791.1| 50S ribosomal protein L28 [Pseudomonas stutzeri DSM 4166]
gi|399522929|ref|ZP_10763591.1| 50S ribosomal protein L28 [Pseudomonas pseudoalcaligenes CECT 5344]
gi|421503107|ref|ZP_15950058.1| 50S ribosomal protein L28 [Pseudomonas mendocina DLHK]
gi|166226604|sp|A4Y0K5.1|RL28_PSEMY RecName: Full=50S ribosomal protein L28
gi|166226606|sp|A4VFR3.1|RL28_PSEU5 RecName: Full=50S ribosomal protein L28
gi|145568708|gb|ABP77814.1| 50S ribosomal protein L28 [Pseudomonas stutzeri A1501]
gi|145577589|gb|ABP87121.1| LSU ribosomal protein L28P [Pseudomonas mendocina ymp]
gi|327478739|gb|AEA82049.1| 50S ribosomal protein L28 [Pseudomonas stutzeri DSM 4166]
gi|328919904|gb|AEB60735.1| 50S ribosomal protein L28 [Pseudomonas mendocina NK-01]
gi|399109298|emb|CCH40152.1| 50S ribosomal protein L28 [Pseudomonas pseudoalcaligenes CECT 5344]
gi|400346183|gb|EJO94542.1| 50S ribosomal protein L28 [Pseudomonas mendocina DLHK]
Length = 78
Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN +S NKTRR + PN+Q R + R +R++V+ +R IDK GID
Sbjct: 8 TGKGPVTGNNISH-ANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRVIDKR-GID 65
Query: 110 EYL 112
L
Sbjct: 66 VVL 68
>gi|397688833|ref|YP_006526152.1| 50S ribosomal protein L28 [Pseudomonas stutzeri DSM 10701]
gi|395810389|gb|AFN79794.1| 50S ribosomal protein L28 [Pseudomonas stutzeri DSM 10701]
Length = 78
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKTRR + PN+Q R + +R +R++++ +R IDK GID
Sbjct: 8 TGKGPVTGNNVSH-AMNKTRRRFLPNLQHHRFWVESENRFVRLRLSAKGMRIIDKR-GID 65
Query: 110 EYL 112
L
Sbjct: 66 AVL 68
>gi|409404956|ref|ZP_11253429.1| 50S ribosomal protein L28 [Herbaspirillum sp. GW103]
gi|386435723|gb|EIJ48547.1| 50S ribosomal protein L28 [Herbaspirillum sp. GW103]
Length = 66
Score = 39.7 bits (91), Expect = 0.81, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GN VS NKT+R + PN+Q +R+F +R + ++++ LR IDK G
Sbjct: 3 GNNVSH-ANNKTKRRFLPNLQNRRIFVESENRWVSLRLSNAGLRVIDKIG 51
>gi|320533926|ref|ZP_08034498.1| ribosomal protein L28 [Actinomyces sp. oral taxon 171 str. F0337]
gi|343522755|ref|ZP_08759721.1| ribosomal protein L28 [Actinomyces sp. oral taxon 175 str. F0384]
gi|320133859|gb|EFW26235.1| ribosomal protein L28 [Actinomyces sp. oral taxon 171 str. F0337]
gi|343402164|gb|EGV14670.1| ribosomal protein L28 [Actinomyces sp. oral taxon 175 str. F0384]
Length = 82
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G FG VS +T R W PN+Q KR + + R +R+ V+ +R IDK G
Sbjct: 10 VTGARPVFGRSVSHSH-KRTPRRWDPNLQRKRYWVPSLGRTVRLTVSAKGIRTIDKLG 66
>gi|332291042|ref|YP_004429651.1| 50S ribosomal protein L28 [Krokinobacter sp. 4H-3-7-5]
gi|332169128|gb|AEE18383.1| ribosomal protein L28 [Krokinobacter sp. 4H-3-7-5]
Length = 79
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGI 108
GK GN VS NKT+R + N+ +KR + D+ I +KV+T AL+ I+K GI
Sbjct: 7 LTGKKAMVGNNVSH-AMNKTKRKFNVNLMKKRFYLPAEDKWITLKVSTSALKNINKK-GI 64
Query: 109 DEYL 112
D +
Sbjct: 65 DAVV 68
>gi|296112807|ref|YP_003626745.1| 50S ribosomal protein L28 [Moraxella catarrhalis RH4]
gi|416155795|ref|ZP_11604088.1| 50S ribosomal protein L28 [Moraxella catarrhalis 101P30B1]
gi|416217202|ref|ZP_11624151.1| 50S ribosomal protein L28 [Moraxella catarrhalis 7169]
gi|416220137|ref|ZP_11625229.1| 50S ribosomal protein L28 [Moraxella catarrhalis 103P14B1]
gi|416230155|ref|ZP_11628244.1| 50S ribosomal protein L28 [Moraxella catarrhalis 46P47B1]
gi|416235387|ref|ZP_11630146.1| 50S ribosomal protein L28 [Moraxella catarrhalis 12P80B1]
gi|416239325|ref|ZP_11631875.1| 50S ribosomal protein L28 [Moraxella catarrhalis BC1]
gi|416241881|ref|ZP_11633015.1| 50S ribosomal protein L28 [Moraxella catarrhalis BC7]
gi|416247547|ref|ZP_11635730.1| 50S ribosomal protein L28 [Moraxella catarrhalis BC8]
gi|416250152|ref|ZP_11637161.1| 50S ribosomal protein L28 [Moraxella catarrhalis CO72]
gi|416254296|ref|ZP_11638676.1| 50S ribosomal protein L28 [Moraxella catarrhalis O35E]
gi|421779625|ref|ZP_16216117.1| 50S ribosomal protein L28 [Moraxella catarrhalis RH4]
gi|295920501|gb|ADG60852.1| 50S ribosomal protein L28 [Moraxella catarrhalis BBH18]
gi|326561053|gb|EGE11418.1| 50S ribosomal protein L28 [Moraxella catarrhalis 7169]
gi|326561481|gb|EGE11825.1| 50S ribosomal protein L28 [Moraxella catarrhalis 46P47B1]
gi|326564428|gb|EGE14656.1| 50S ribosomal protein L28 [Moraxella catarrhalis 12P80B1]
gi|326566725|gb|EGE16864.1| 50S ribosomal protein L28 [Moraxella catarrhalis 103P14B1]
gi|326567513|gb|EGE17628.1| 50S ribosomal protein L28 [Moraxella catarrhalis BC1]
gi|326569359|gb|EGE19419.1| 50S ribosomal protein L28 [Moraxella catarrhalis BC8]
gi|326571442|gb|EGE21457.1| 50S ribosomal protein L28 [Moraxella catarrhalis BC7]
gi|326575275|gb|EGE25203.1| 50S ribosomal protein L28 [Moraxella catarrhalis CO72]
gi|326576638|gb|EGE26545.1| 50S ribosomal protein L28 [Moraxella catarrhalis 101P30B1]
gi|326577494|gb|EGE27374.1| 50S ribosomal protein L28 [Moraxella catarrhalis O35E]
gi|407813335|gb|EKF84117.1| 50S ribosomal protein L28 [Moraxella catarrhalis RH4]
Length = 78
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKTRR + PN+ R + +R +R++V++ +R IDK G
Sbjct: 8 TGKRPLVGNNVSH-AHNKTRRRFLPNLHNHRFWVESENRFVRLRVSSKGMRIIDKHG 63
>gi|260891095|ref|ZP_05902358.1| ribosomal protein L28 [Leptotrichia hofstadii F0254]
gi|260859122|gb|EEX73622.1| ribosomal protein L28 [Leptotrichia hofstadii F0254]
Length = 99
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 41 MNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALR 100
+N+ +R GK + GNRVS T+R W+PN+Q + I + +RV+V T A++
Sbjct: 12 VNKMQRCEVFGKTVSHGNRVSHS-HRATKRIWRPNLQT--MLLTINNEEVRVRVCTKAMK 68
Query: 101 CI--DKAGGIDEYLLK 114
+ A + + LLK
Sbjct: 69 TLKGKNADQVKKILLK 84
>gi|451332843|ref|ZP_21903431.1| LSU ribosomal protein L28p [Amycolatopsis azurea DSM 43854]
gi|449424617|gb|EMD29910.1| LSU ribosomal protein L28p [Amycolatopsis azurea DSM 43854]
gi|452950628|gb|EME56083.1| 50S ribosomal protein L28 [Amycolatopsis decaplanina DSM 44594]
Length = 78
Score = 39.7 bits (91), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G+ +G +VS +T R W+PN+Q KR F R +R++V+ ++ IDK G
Sbjct: 7 VTGRKPGYGKQVSHSH-RRTSRRWEPNLQAKRYFVPSEGRWVRLRVSVKGMKTIDKRG 63
>gi|345864304|ref|ZP_08816506.1| 50S ribosomal protein L28 [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345877248|ref|ZP_08829001.1| hydantoin utilization protein A [endosymbiont of Riftia pachyptila
(vent Ph05)]
gi|344225715|gb|EGV52065.1| hydantoin utilization protein A [endosymbiont of Riftia pachyptila
(vent Ph05)]
gi|345124500|gb|EGW54378.1| 50S ribosomal protein L28 [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 78
Score = 39.7 bits (91), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKT+R + PN+ R + +R +R++VT++ +R IDK GID
Sbjct: 8 TGKRPVSGNNVSH-AHNKTKRRFLPNLHYHRFWVESENRWVRLRVTSNGMRIIDKK-GID 65
Query: 110 EYL 112
L
Sbjct: 66 TVL 68
>gi|289740245|gb|ADD18870.1| mitochondrial ribosomal protein L28 [Glossina morsitans morsitans]
Length = 300
Score = 39.7 bits (91), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
+P I + G++ G+ + G + + W P ++ + S +++ ++ V
Sbjct: 72 IPLPLIDPPESNTGIWGGEAVIKGFQKRHRLKRRVPHFWVPVLKRSVVHSEVLNEYMAVV 131
Query: 94 VTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKIEKLYEELGQTEVAFFTPEEEA 153
VT L I + G D YLLK P + + + L K KI L E L EE+
Sbjct: 132 VTDTTLEKIHECRGFDHYLLKNPACDLRSTLALTLKRKI--LLELLNGCPTRADNAEEQQ 189
Query: 154 KLEQDFK 160
+L +++K
Sbjct: 190 RLLKEYK 196
>gi|163848340|ref|YP_001636384.1| 50S ribosomal protein L28 [Chloroflexus aurantiacus J-10-fl]
gi|222526259|ref|YP_002570730.1| 50S ribosomal protein L28 [Chloroflexus sp. Y-400-fl]
gi|163669629|gb|ABY35995.1| ribosomal protein L28 [Chloroflexus aurantiacus J-10-fl]
gi|222450138|gb|ACM54404.1| ribosomal protein L28 [Chloroflexus sp. Y-400-fl]
Length = 84
Score = 39.7 bits (91), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R G+ FG VS +T R W PNVQ++R++ R +R+K++ ALR I+
Sbjct: 2 SRRCDLTGRSPSFGYNVS-FSKRRTNRRWLPNVQKRRIWVPEEQRFVRLKLSAAALREIE 60
Query: 104 KAG 106
+ G
Sbjct: 61 RKG 63
>gi|385809183|ref|YP_005845579.1| 50S ribosomal protein L28P [Ignavibacterium album JCM 16511]
gi|383801231|gb|AFH48311.1| Ribosomal protein L28P [Ignavibacterium album JCM 16511]
Length = 79
Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R GK +G+ +S NKT R + PN+Q+KR++ ++R + ++++T A++ I+
Sbjct: 2 SRRCQVTGKGPVYGSSISH-AHNKTNRRFLPNLQKKRIWVQELNRFVTLRLSTSAIKTIN 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|254491381|ref|ZP_05104560.1| ribosomal protein L28 [Methylophaga thiooxidans DMS010]
gi|224462859|gb|EEF79129.1| ribosomal protein L28 [Methylophaga thiooxydans DMS010]
Length = 66
Score = 39.7 bits (91), Expect = 0.89, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GN VS NKT+R + PN+ R++ +R ++++V+ H LR IDK G
Sbjct: 3 GNNVSH-AHNKTKRRFLPNLHSHRIWVESENRWVKLRVSNHGLRIIDKKG 51
>gi|77166098|ref|YP_344623.1| 50S ribosomal protein L28 [Nitrosococcus oceani ATCC 19707]
gi|254436099|ref|ZP_05049606.1| ribosomal protein L28 [Nitrosococcus oceani AFC27]
gi|123593489|sp|Q3J7V3.1|RL28_NITOC RecName: Full=50S ribosomal protein L28
gi|76884412|gb|ABA59093.1| LSU ribosomal protein L28P [Nitrosococcus oceani ATCC 19707]
gi|207089210|gb|EDZ66482.1| ribosomal protein L28 [Nitrosococcus oceani AFC27]
Length = 78
Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKTRR + PN+ R + +R +++KV+ LR IDK GID
Sbjct: 8 TGKRPASGNNVSH-AHNKTRRRFLPNLHTHRFWVEGENRWVKLKVSGKGLRMIDKL-GID 65
Query: 110 EYL 112
+ L
Sbjct: 66 QVL 68
>gi|365827828|ref|ZP_09369669.1| 50S ribosomal protein L28 [Actinomyces sp. oral taxon 849 str.
F0330]
gi|365264689|gb|EHM94485.1| 50S ribosomal protein L28 [Actinomyces sp. oral taxon 849 str.
F0330]
Length = 82
Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G FG VS +T R W PN+Q KR + + R +R+ V+ +R IDK G
Sbjct: 10 VTGARPVFGRSVSHSH-RRTPRRWDPNLQRKRYWVPSLGRTVRLTVSAKGIRTIDKLG 66
>gi|325068208|ref|ZP_08126881.1| 50S ribosomal protein L28 [Actinomyces oris K20]
gi|326774132|ref|ZP_08233414.1| ribosomal protein L28 [Actinomyces viscosus C505]
gi|326636271|gb|EGE37175.1| ribosomal protein L28 [Actinomyces viscosus C505]
Length = 79
Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G FG VS +T R W PN+Q KR + + R +R+ V+ +R IDK G
Sbjct: 7 VTGARPVFGRSVSHSH-KRTPRRWDPNLQRKRYWVPSLGRTVRLTVSAKGIRTIDKLG 63
>gi|226946811|ref|YP_002801884.1| 50S ribosomal protein L28 [Azotobacter vinelandii DJ]
gi|259646727|sp|C1DK04.1|RL28_AZOVD RecName: Full=50S ribosomal protein L28
gi|226721738|gb|ACO80909.1| ribosomal protein L28 [Azotobacter vinelandii DJ]
Length = 78
Score = 39.7 bits (91), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN +S NKTRR + PN+Q R + R +R++V+ +R IDK GID
Sbjct: 8 TGKGPVTGNNISH-ANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIIDKR-GID 65
Query: 110 EYL 112
L
Sbjct: 66 VVL 68
>gi|257094340|ref|YP_003167981.1| 50S ribosomal protein L28 [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046864|gb|ACV36052.1| ribosomal protein L28 [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 77
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS N+T+R + PN+Q +R + +R +R++V+ LR IDK GID
Sbjct: 8 TGKGPMAGNNVSH-ANNRTKRRFLPNLQYRRFWIEGENRWVRLRVSNAGLRTIDK-NGID 65
Query: 110 EYL 112
L
Sbjct: 66 VVL 68
>gi|114321788|ref|YP_743471.1| 50S ribosomal protein L28P [Alkalilimnicola ehrlichii MLHE-1]
gi|122310770|sp|Q0A5A6.1|RL28_ALHEH RecName: Full=50S ribosomal protein L28
gi|114228182|gb|ABI57981.1| LSU ribosomal protein L28P [Alkalilimnicola ehrlichii MLHE-1]
Length = 78
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS NKT+R + PN+ R + R +R++V++ +R ID+ GID
Sbjct: 8 TGKRPTTGNNVSH-ANNKTKRRFLPNLHHHRFWVESEQRFVRLRVSSKGMRIIDRK-GID 65
Query: 110 EYL 112
+ L
Sbjct: 66 QVL 68
>gi|90415485|ref|ZP_01223419.1| 50S ribosomal protein L28 [gamma proteobacterium HTCC2207]
gi|90332808|gb|EAS47978.1| 50S ribosomal protein L28 [marine gamma proteobacterium HTCC2207]
Length = 78
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS N+TRR ++PN+ R + R ++++V+T +R IDK G
Sbjct: 8 TGKRPMAGNNVSH-AKNRTRRRFEPNLHSHRFWVEAEKRFVKLRVSTKGMRIIDKKG 63
>gi|424841809|ref|ZP_18266434.1| ribosomal protein L28 [Saprospira grandis DSM 2844]
gi|395320007|gb|EJF52928.1| ribosomal protein L28 [Saprospira grandis DSM 2844]
Length = 132
Score = 39.7 bits (91), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS KTRR + N++ KR+F + I+VKV+ ALR ++K G
Sbjct: 7 LTGKKAMVGNNVSH-SNRKTRRRFNANIKTKRIFVPESNVWIKVKVSMRALRTMNKLG 63
>gi|388543925|ref|ZP_10147214.1| 50S ribosomal protein L28 [Pseudomonas sp. M47T1]
gi|388277753|gb|EIK97326.1| 50S ribosomal protein L28 [Pseudomonas sp. M47T1]
Length = 78
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 51 GKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDE 110
GK GN +S NKTRR + PN+Q R + R +R++V+ +R IDK GID
Sbjct: 9 GKGPVTGNNISH-ANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIIDKR-GIDV 66
Query: 111 YL 112
L
Sbjct: 67 VL 68
>gi|193215033|ref|YP_001996232.1| 50S ribosomal protein L28 [Chloroherpeton thalassium ATCC 35110]
gi|226738052|sp|B3QZ92.1|RL28_CHLT3 RecName: Full=50S ribosomal protein L28
gi|193088510|gb|ACF13785.1| ribosomal protein L28 [Chloroherpeton thalassium ATCC 35110]
Length = 74
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
+K + GK Q+GN VS N R ++PN+Q KR++ R ++VK++ A++ I
Sbjct: 2 SKVCILTGKKHQYGNTVSH-ANNHRRTRFEPNIQAKRIWLEEEKRWVKVKLSAKAIKIIS 60
Query: 104 KAG 106
K G
Sbjct: 61 KRG 63
>gi|421615309|ref|ZP_16056335.1| 50S ribosomal protein L28 [Pseudomonas stutzeri KOS6]
gi|409782697|gb|EKN62248.1| 50S ribosomal protein L28 [Pseudomonas stutzeri KOS6]
Length = 78
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN +S NKTRR + PN+Q R + +R +R++++ +R IDK GID
Sbjct: 8 TGKGPVTGNNISH-ANNKTRRRFLPNLQHHRFWVESENRFVRLRLSAKGMRIIDKR-GID 65
Query: 110 EYL 112
L
Sbjct: 66 VVL 68
>gi|158296736|ref|XP_317077.4| AGAP008376-PA [Anopheles gambiae str. PEST]
gi|157014855|gb|EAA12310.5| AGAP008376-PA [Anopheles gambiae str. PEST]
Length = 289
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
VP I A G++ G+ + G + + W P ++ + S +++ ++ V
Sbjct: 72 VPLPLIDPPEAHDGIWGGEAVIKGFQKRNQYKRRVPHFWVPVLRRSVVHSRVLNEYMAVT 131
Query: 94 VTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKI 132
VT L I G D YLLKTP + + + + K K+
Sbjct: 132 VTDRTLAQIHDHHGFDHYLLKTPACDLRSLLAIKLKKKV 170
>gi|399154949|ref|ZP_10755016.1| 50S ribosomal protein L28 [gamma proteobacterium SCGC AAA007-O20]
Length = 78
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK GN VS NKTRR + PN+ R + +R +++K++ LR ID
Sbjct: 2 AKVCQVTGKRPMSGNNVSH-AHNKTRRRFYPNLHTHRFWVESENRFVKLKLSAKGLRVID 60
Query: 104 KAGGIDEYL 112
K GID L
Sbjct: 61 KK-GIDVVL 68
>gi|350568345|ref|ZP_08936747.1| 50S ribosomal protein L28 [Propionibacterium avidum ATCC 25577]
gi|348661565|gb|EGY78248.1| 50S ribosomal protein L28 [Propionibacterium avidum ATCC 25577]
Length = 78
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
++R G FGN VS T+R W PN+Q+KR + + R + + +T A++ ID
Sbjct: 2 SRRCQVRGTKPGFGNNVSHSQ-RHTKRRWNPNIQKKRYWVPSLGRQVTLTLTPKAMKEID 60
Query: 104 KAG 106
+ G
Sbjct: 61 RRG 63
>gi|311745778|ref|ZP_07719563.1| ribosomal protein L28 [Algoriphagus sp. PR1]
gi|126575977|gb|EAZ80255.1| ribosomal protein L28 [Algoriphagus sp. PR1]
Length = 80
Score = 39.7 bits (91), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 44 AKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCID 103
AK GK + GN VS NKT+R + PN+ +K + D I +KV T AL+ I+
Sbjct: 2 AKVCDITGKRPRVGNNVSH-ANNKTKRRFYPNLHKKTFYVPEEDAWITLKVCTKALKTIN 60
Query: 104 KAG 106
K G
Sbjct: 61 KKG 63
>gi|149376402|ref|ZP_01894164.1| 50S ribosomal protein L28 [Marinobacter algicola DG893]
gi|149359243|gb|EDM47705.1| 50S ribosomal protein L28 [Marinobacter algicola DG893]
Length = 78
Score = 39.7 bits (91), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS N +RR + PN+Q R + R +R++V+T +R IDK GID
Sbjct: 8 TGKRPVTGNNVSH-AMNHSRRRFLPNLQNHRFWVESEKRFVRLRVSTKGMRVIDKK-GID 65
Query: 110 EYL 112
L
Sbjct: 66 AVL 68
>gi|329911396|ref|ZP_08275500.1| LSU ribosomal protein L28p [Oxalobacteraceae bacterium IMCC9480]
gi|327545921|gb|EGF31021.1| LSU ribosomal protein L28p [Oxalobacteraceae bacterium IMCC9480]
Length = 66
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGIDEYLL 113
GN VS NKT+R + PN+Q +R+F +R + ++++ LR IDK GID L+
Sbjct: 3 GNNVSH-ANNKTKRRFLPNLQRRRIFVESENRWVSLRLSNAGLRVIDKL-GIDAVLV 57
>gi|384084093|ref|ZP_09995268.1| 50S ribosomal protein L28 [Acidithiobacillus thiooxidans ATCC
19377]
Length = 78
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN V NKTRR + PN+Q R + +R +R++V+T +R IDK GID
Sbjct: 8 TGKKHMPGNNVLH-AHNKTRRRFLPNLQYHRFWVESENRWVRMRVSTKGIRTIDKK-GID 65
Query: 110 EYL 112
L
Sbjct: 66 AVL 68
>gi|334143430|ref|YP_004536586.1| 50S ribosomal protein L28 [Thioalkalimicrobium cyclicum ALM1]
gi|350563530|ref|ZP_08932351.1| ribosomal protein L28 [Thioalkalimicrobium aerophilum AL3]
gi|333964341|gb|AEG31107.1| 50S ribosomal protein L28 [Thioalkalimicrobium cyclicum ALM1]
gi|349778665|gb|EGZ33016.1| ribosomal protein L28 [Thioalkalimicrobium aerophilum AL3]
Length = 78
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS KTRR + PN+Q R + +R +++++T A+R IDK GI+
Sbjct: 8 TGKRPAVGNNVSHSH-RKTRRRFLPNLQAHRFWVESENRFVKLRLTPAAMRTIDK-NGIE 65
Query: 110 EYL 112
L
Sbjct: 66 SVL 68
>gi|170031460|ref|XP_001843603.1| 39S ribosomal protein L28, mitochondrial [Culex quinquefasciatus]
gi|167870169|gb|EDS33552.1| 39S ribosomal protein L28, mitochondrial [Culex quinquefasciatus]
Length = 283
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 34 VPDSRIVMNRAKRGLFAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVK 93
VP I + G++ G+ I G + + W P ++ + S +++ ++ V
Sbjct: 72 VPLPLIDPPESHEGIWGGEAIVKGFQKRTPYKRRVPHFWVPVLKRSVVHSQVLNEYMAVT 131
Query: 94 VTTHALRCIDKAGGIDEYLLKTPYHKMDTEMGLYWKTKI 132
VT L I G D YLLKTP + + + + K KI
Sbjct: 132 VTDRTLDQIHDNHGFDHYLLKTPACDLRSMLAIKLKKKI 170
>gi|163755937|ref|ZP_02163054.1| 50S ribosomal protein L28 [Kordia algicida OT-1]
gi|161324108|gb|EDP95440.1| 50S ribosomal protein L28 [Kordia algicida OT-1]
Length = 78
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS NKT+R + N+ +KR + D+ + +KV+T AL+ I+K G
Sbjct: 7 LTGKKAMVGNNVSH-AMNKTKRKFNANLTKKRFYIPEEDKWVTLKVSTSALKTINKKG 63
>gi|359780920|ref|ZP_09284145.1| 50S ribosomal protein L28 [Pseudomonas psychrotolerans L19]
gi|359370980|gb|EHK71546.1| 50S ribosomal protein L28 [Pseudomonas psychrotolerans L19]
Length = 78
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 57 GNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GN VS NKTRR + PN+Q R + R +R++V+ +R IDK G
Sbjct: 15 GNNVSH-ANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIIDKRG 63
>gi|408371500|ref|ZP_11169265.1| 50S ribosomal protein L28 [Galbibacter sp. ck-I2-15]
gi|407743090|gb|EKF54672.1| 50S ribosomal protein L28 [Galbibacter sp. ck-I2-15]
Length = 78
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK GN VS N+T+R + N+ +KR F DR + +K++T AL+ I+K G
Sbjct: 7 LTGKKAMVGNNVSH-AMNRTKRKFDANLIKKRFFLPEEDRWVTLKISTAALKTINKKG 63
>gi|88705461|ref|ZP_01103172.1| 50S ribosomal protein L28 [Congregibacter litoralis KT71]
gi|88700551|gb|EAQ97659.1| 50S ribosomal protein L28 [Congregibacter litoralis KT71]
Length = 78
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN VS N+TRR + PN+ + R + R +R++V++ +R IDK GID
Sbjct: 8 TGKRPVTGNNVSH-AKNRTRRRFLPNLHQHRFWVESEKRFVRLRVSSKGMRIIDKK-GID 65
Query: 110 EYL 112
L
Sbjct: 66 TVL 68
>gi|389680689|ref|ZP_10172039.1| ribosomal protein L28 [Pseudomonas chlororaphis O6]
gi|399004850|ref|ZP_10707454.1| ribosomal protein L28 [Pseudomonas sp. GM17]
gi|404400784|ref|ZP_10992368.1| 50S ribosomal protein L28 [Pseudomonas fuscovaginae UPB0736]
gi|425902329|ref|ZP_18878920.1| ribosomal protein L28 [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|388555794|gb|EIM19037.1| ribosomal protein L28 [Pseudomonas chlororaphis O6]
gi|397881984|gb|EJK98472.1| ribosomal protein L28 [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|398128218|gb|EJM17611.1| ribosomal protein L28 [Pseudomonas sp. GM17]
Length = 77
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 50 AGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAGGID 109
GK GN +S NKTRR + PN+Q R + R +R++V+ +R IDK GID
Sbjct: 8 TGKGPVTGNNISH-ANNKTRRRFLPNLQHHRFWVESEKRFVRLRVSAKGMRIIDKR-GID 65
Query: 110 EYL 112
L
Sbjct: 66 VVL 68
>gi|345010981|ref|YP_004813335.1| 50S ribosomal protein L28 [Streptomyces violaceusniger Tu 4113]
gi|344037330|gb|AEM83055.1| 50S ribosomal protein L28 [Streptomyces violaceusniger Tu 4113]
Length = 78
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
G+ FG+ +S +T+R + PN+Q KR + RHIR+ ++T A++ +D G
Sbjct: 7 LTGRQPGFGHHISHSH-RRTKRRFDPNIQHKRYWLPSEGRHIRLTLSTKAIKTVDTIG 63
>gi|371778321|ref|ZP_09484643.1| 50S ribosomal protein L28 [Anaerophaga sp. HS1]
Length = 80
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 49 FAGKHIQFGNRVSEDGGNKTRRNWKPNVQEKRLFSYIMDRHIRVKVTTHALRCIDKAG 106
GK + GN VS +T+R + PN+ +KR + DR I +KV+ LR I+K G
Sbjct: 7 ITGKRVLVGNNVSHSK-RRTKRRFNPNLLKKRFYLPEEDRWITLKVSAAGLRLINKLG 63
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,370,342,589
Number of Sequences: 23463169
Number of extensions: 133683934
Number of successful extensions: 439280
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 346
Number of HSP's that attempted gapping in prelim test: 438026
Number of HSP's gapped (non-prelim): 1391
length of query: 222
length of database: 8,064,228,071
effective HSP length: 137
effective length of query: 85
effective length of database: 9,144,741,214
effective search space: 777303003190
effective search space used: 777303003190
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)