BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039030
(523 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 612 bits (1577), Expect = e-175, Method: Compositional matrix adjust.
Identities = 302/467 (64%), Positives = 369/467 (79%), Gaps = 10/467 (2%)
Query: 67 LPIRKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPP-------- 118
LPIR IPG+YGLP +GPIKDR DY Y+ G +EFFKS+I+KY STV+R NMPP
Sbjct: 25 LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENP 84
Query: 119 -VIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKLKQLL 177
V+ LLDGKSFPVLFDV KVEKKDLFTGTYMPST+LTGGYR+LSYLDPSEP H KLK LL
Sbjct: 85 QVVALLDGKSFPVLFDVDKVEKKDLFTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLL 144
Query: 178 FFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFGKNPA 237
FFLL + R+++ PEF +TY+E F++LE++L+ KGKADF G+++ AFNFLARA++G NPA
Sbjct: 145 FFLLKSSRNRIFPEFQATYSELFDSLEKELSLKGKADFGGSSDGTAFNFLARAFYGTNPA 204
Query: 238 DTTLGSDAPTLIGKWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDYQRLYDFFHE 297
DT L +DAP LI KW+ K DYQRLY+FF E
Sbjct: 205 DTKLKADAPGLITKWVLFNLHPLLSIGLPRVIEEPLIHTFSLPPALVKSDYQRLYEFFLE 264
Query: 298 SSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEE 357
S+G +L EA+KLG+SREEA HNL+FATCFN++GGMKILFPNMVK IGR G ++H +LAEE
Sbjct: 265 SAGEILVEADKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEE 324
Query: 358 IRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVK 417
IRSV++SNGG++TM +E+M KSVVYE LR EPPV QYG+AK+DL+I SH+A+F+VK
Sbjct: 325 IRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVK 384
Query: 418 EGEMLFGYQPFATKDPKIFERAEEFVADRFVG-EGEKMLKHVLWSNGPETENPTVGNKQC 476
GEML+GYQP AT+DPKIF+RA+EFV +RFVG EGEK+L+HVLWSNGPETE PTVGNKQC
Sbjct: 385 AGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQC 444
Query: 477 AGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRASF 523
AGKDFVVL +RL ++E+F RYDSFDI+VG S +GSSV +SL++ASF
Sbjct: 445 AGKDFVVLVARLFVIEIFRRYDSFDIEVGTSPLGSSVNFSSLRKASF 491
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 610 bits (1572), Expect = e-175, Method: Compositional matrix adjust.
Identities = 301/467 (64%), Positives = 368/467 (78%), Gaps = 10/467 (2%)
Query: 67 LPIRKIPGSYGLPYLGPIKDRQDYLYNLGRDEFFKSKIQKYGSTVFRANMPP-------- 118
LPIR IPG+YGLP +GPIKDR DY Y+ G +EFFKS+I+KY STV+R NMPP
Sbjct: 25 LPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENP 84
Query: 119 -VIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKLKQLL 177
V+ LLDGKSFPVLFDV KVEKKDL TGTYMPST+LTGGYR+LSYLDPSEP H KLK LL
Sbjct: 85 QVVALLDGKSFPVLFDVDKVEKKDLLTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLL 144
Query: 178 FFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFGKNPA 237
FFLL + R+++ PEF +TY+E F++LE++L+ KGKADF G+++ AFNFLARA++G NPA
Sbjct: 145 FFLLKSSRNRIFPEFQATYSELFDSLEKELSLKGKADFGGSSDGTAFNFLARAFYGTNPA 204
Query: 238 DTTLGSDAPTLIGKWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDYQRLYDFFHE 297
DT L +DAP LI KW+ K DYQRLY+FF E
Sbjct: 205 DTKLKADAPGLITKWVLFNLHPLLSIGLPRVIEEPLIHTFSLPPALVKSDYQRLYEFFLE 264
Query: 298 SSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEE 357
S+G +L EA+KLG+SREEA HNL+FATCFN++GGMKILFPNMVK IGR G ++H +LAEE
Sbjct: 265 SAGEILVEADKLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEE 324
Query: 358 IRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVK 417
IRSV++SNGG++TM +E+M KSVVYE LR EPPV QYG+AK+DL+I SH+A+F+VK
Sbjct: 325 IRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVK 384
Query: 418 EGEMLFGYQPFATKDPKIFERAEEFVADRFVG-EGEKMLKHVLWSNGPETENPTVGNKQC 476
GEML+GYQP AT+DPKIF+RA+EFV +RFVG EGEK+L+HVLWSNGPETE PTVGNKQC
Sbjct: 385 AGEMLYGYQPLATRDPKIFDRADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGNKQC 444
Query: 477 AGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRASF 523
AGKDFVVL +RL ++E+F RYDSFDI+VG S +GSSV +SL++ASF
Sbjct: 445 AGKDFVVLVARLFVIEIFRRYDSFDIEVGTSPLGSSVNFSSLRKASF 491
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 593 bits (1528), Expect = e-170, Method: Compositional matrix adjust.
Identities = 289/470 (61%), Positives = 351/470 (74%), Gaps = 11/470 (2%)
Query: 64 PTKLPIRKIPGSYGLPYLGPIKDRQDYLYNLG-RDEFFKSKIQKYGSTVFRANMPP---- 118
P+ P+R+IPGSYG+P+ PIKDR +Y Y G RDE+F+S++QKY STVFRANMPP
Sbjct: 3 PSSKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFV 62
Query: 119 -----VIVLLDGKSFPVLFDVSKVEKKDLFTGTYMPSTDLTGGYRVLSYLDPSEPNHAKL 173
VIVLLD KSFP+LFDVSKVEKKDLFTGTYMPST LTGGYRVLSYLDPSEP HA+L
Sbjct: 63 SSNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQL 122
Query: 174 KQLLFFLLMNRRDKVIPEFHSTYTEAFETLERDLAAKGKADFSGANEQAAFNFLARAWFG 233
K LLFF+L N ++VIP+F +TYTE FE LE +LA GKA F+ EQAAF FL RA+F
Sbjct: 123 KNLLFFMLKNSSNRVIPQFETTYTELFEGLEAELAKNGKAAFNDVGEQAAFRFLGRAYFN 182
Query: 234 KNPADTTLGSDAPTLIGKWIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDYQRLYD 293
NP +T LG+ APTLI W+ K Y +LYD
Sbjct: 183 SNPEETKLGTSAPTLISSWVLFNLAPTLDLGLPWFLQEPLLHTFRLPAFLIKSTYNKLYD 242
Query: 294 FFHESSGFVLDEAEKLGVSREEACHNLVFATCFNSFGGMKILFPNMVKWIGRGGVKLHMQ 353
+F + V+++AEKLGV ++EA HN++FA CFN+FGG+KILFPN +KWIG G LH Q
Sbjct: 243 YFQSVATPVMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQ 302
Query: 354 LAEEIRSVVRSNG-GKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEA 412
LAEEIR ++S G G VT+ +EQMP KSVVYE LR+EPPV QYGKAK + I SH+A
Sbjct: 303 LAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDA 362
Query: 413 SFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVG 472
+FEVK+GEMLFGYQPFATKDPK+F+R EE+V DRFVG+GE +LK+V WSNGPETE+PTV
Sbjct: 363 TFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGEALLKYVWWSNGPETESPTVE 422
Query: 473 NKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRAS 522
NKQCAGKDFVVL +RL ++ELF RYDSF+I++G+S +G++VTLT LKRAS
Sbjct: 423 NKQCAGKDFVVLITRLFVIELFRRYDSFEIELGESPLGAAVTLTFLKRAS 472
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 19/150 (12%)
Query: 357 EIRSVVRSNGGKV------TMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSH 410
+IR VR K+ T +++MP++ V+ EVLR+ PPV G R+LI
Sbjct: 275 DIRERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPV----GGGFRELIQDCQ 330
Query: 411 EASFEVKEGEMLFGYQPFATK-DPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENP 469
F +G L YQ T DP ++ E+F +RF +G N P P
Sbjct: 331 FQGFHFPKG-WLVSYQISQTHADPDLYPDPEKFDPERFTPDGSAT------HNPPFAHVP 383
Query: 470 TVGN-KQCAGKDFVVLASRLLLVELFLRYD 498
G ++C GK+F L +L L ++D
Sbjct: 384 FGGGLRECLGKEFARLEMKLFATRLIQQFD 413
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 355 AEEIRSVVRSNGGKVTMAG---------MEQMPWMKSVVYEVLRMEPPVALQYGKAKRDL 405
EE++ + + G KV++ G + +P + S++ E LR+ +L AK D
Sbjct: 295 TEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSS-ASLNIRTAKEDF 353
Query: 406 IISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPE 465
+ + S+ +++ +++ Y DP+I+ F DR++ E K K + NG +
Sbjct: 354 TLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKT-KTTFYCNGLK 412
Query: 466 TENPTV----GNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKS 507
+ + G C G+ F + + L+ L L Y ++ G++
Sbjct: 413 LKYYYMPFGSGATICPGRLFAIHEIKQFLI-LMLSYFELELIEGQA 457
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 16/166 (9%)
Query: 355 AEEIRSVVRSNGGKVTMAG---------MEQMPWMKSVVYEVLRMEPPVALQYGKAKRDL 405
EE++ + + G KV++ G + +P + S++ E LR+ +L AK D
Sbjct: 295 TEEVKRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSS-ASLNIRTAKEDF 353
Query: 406 IISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPE 465
+ + S+ +++ +++ Y DP+I+ F DR++ E K K + NG +
Sbjct: 354 TLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKT-KTTFYCNGLK 412
Query: 466 TENPTV----GNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKS 507
+ + G C G+ F + + L+ L L Y ++ G++
Sbjct: 413 LKYYYMPFGSGATICPGRLFAIHEIKQFLI-LMLSYFELELIEGQA 457
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 378 PWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFAT--KDPKI 435
P SV++E LR+ + + I S+ + ++ G+ L + PF + DP+I
Sbjct: 310 PVFDSVLWETLRLTAAALITRDVTQDKKICLSNGQEYHLRRGDRLCVF-PFISPQMDPQI 368
Query: 436 FERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTV----GNKQCAGKDFVVLASRLLLV 491
++ E F DRF+ ++ K + NG + P+V + C G+ F V A + L+
Sbjct: 369 HQQPEMFQFDRFLN-ADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVF 427
Query: 492 ELFLRYD 498
+ R+D
Sbjct: 428 TILTRFD 434
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 365 NGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFG 424
+G V+ + Q+P +++V+ E LR+ PP+ + AK + + H + EG+++
Sbjct: 292 DGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH----RIHEGDLVAA 347
Query: 425 YQPFATKDPKIFERAEEFVADRFVG-EGEKMLKHVLWSNGPETENP-TVGNKQCAGKDFV 482
+ + P+ F +FV R+ E +L W P G +C G F
Sbjct: 348 SPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWI-------PFGAGRHRCVGAAFA 400
Query: 483 VLASRLLLVELFLRYD 498
++ + + L Y+
Sbjct: 401 IMQIKAIFSVLLREYE 416
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 365 NGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFG 424
+G V+ + Q+P +++V+ E LR+ PP+ + AK + + H + EG+++
Sbjct: 292 DGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH----RIHEGDLVAA 347
Query: 425 YQPFATKDPKIFERAEEFVADRFVG-EGEKMLKHVLWSNGPETENP-TVGNKQCAGKDFV 482
+ + P+ F +FV R+ E +L W P G +C G F
Sbjct: 348 SPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWI-------PFGAGRHRCVGAAFA 400
Query: 483 VLASRLLLVELFLRYD 498
++ + + L Y+
Sbjct: 401 IMQIKAIFSVLLREYE 416
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 365 NGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFG 424
+G V+ + Q+P +++V+ E LR+ PP+ + AK + + H + EG+++
Sbjct: 292 DGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH----RIHEGDLVAA 347
Query: 425 YQPFATKDPKIFERAEEFVADRFVG-EGEKMLKHVLWSNGPETENP-TVGNKQCAGKDFV 482
+ + P+ F +FV R+ E +L W P G +C G F
Sbjct: 348 SPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWI-------PFGAGRHRCVGAAFA 400
Query: 483 VLASRLLLVELFLRYD 498
++ + + L Y+
Sbjct: 401 IMQIKAIFSVLLREYE 416
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 365 NGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFG 424
+G V+ + Q+P +++V+ E LR+ PP+ + AK + + H + EG+++
Sbjct: 292 DGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGH----RIHEGDLVAA 347
Query: 425 YQPFATKDPKIFERAEEFVADRFVG-EGEKMLKHVLWSNGPETENP-TVGNKQCAGKDFV 482
+ + P+ F +FV R+ E +L W P G +C G F
Sbjct: 348 SPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWI-------PFGAGRHRCVGAAFA 400
Query: 483 VLASRLLLVELFLRYD 498
++ + + L Y+
Sbjct: 401 IMQIKAIFSVLLREYE 416
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 24/134 (17%)
Query: 364 SNGGKVTMAGMEQMPWMKSVVYEVLRMEP--PVALQYGKAKRDLIISSHEASFEVKEGEM 421
++ +VT ++P + + + EVLR+ P P+AL + + I +++ EG +
Sbjct: 328 ASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIF-----GYDIPEGMV 382
Query: 422 LFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKD- 480
+ A D ++E+ EF DRF+ G P G + C G+
Sbjct: 383 VIPNLQGAHLDETVWEQPHEFRPDRFLEPGAN----------PSALAFGCGARVCLGESL 432
Query: 481 -----FVVLASRLL 489
FVVLA RLL
Sbjct: 433 ARLELFVVLA-RLL 445
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 49/203 (24%)
Query: 311 VSREEACHNLVFA--------TCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSVV 362
+S E C +V A T S+ + ++ P KW+ KLH ++ E +
Sbjct: 262 MSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLD----KLHKEIDEFPAQLN 317
Query: 363 RSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGE-- 420
N M++MP+ + V E +R +PP+ + K ++ + S+ V +G+
Sbjct: 318 YDNV-------MDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKV----GSYVVPKGDII 366
Query: 421 ----MLFGYQPFATKDPKIFE-RAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQ 475
+L + A +P++++ +E V F+G G G +
Sbjct: 367 ACSPLLSHHDEEAFPNPRLWDPERDEKVDGAFIGFG-------------------AGVHK 407
Query: 476 CAGKDFVVLASRLLLVELFLRYD 498
C G+ F +L + +L F YD
Sbjct: 408 CIGQKFALLQVKTILATAFREYD 430
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 49/203 (24%)
Query: 311 VSREEACHNLVFA--------TCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSVV 362
+S E C +V A T S+ + ++ P KW+ KLH ++ E +
Sbjct: 247 MSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLD----KLHKEIDEFPAQLN 302
Query: 363 RSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGE-- 420
N M++MP+ + V E +R +PP+ + K ++ + S+ V +G+
Sbjct: 303 YDNV-------MDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKV----GSYVVPKGDII 351
Query: 421 ----MLFGYQPFATKDPKIFE-RAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQ 475
+L + A +P++++ +E V F+G G G +
Sbjct: 352 ACSPLLSHHDEEAFPNPRLWDPERDEKVDGAFIGFG-------------------AGVHK 392
Query: 476 CAGKDFVVLASRLLLVELFLRYD 498
C G+ F +L + +L F YD
Sbjct: 393 CIGQKFALLQVKTILATAFREYD 415
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 82/203 (40%), Gaps = 49/203 (24%)
Query: 311 VSREEACHNLVFA--------TCFNSFGGMKILFPNMVKWIGRGGVKLHMQLAEEIRSVV 362
+S E C +V A T S+ + ++ P KW+ KLH ++ E +
Sbjct: 253 MSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLMHPKNKKWLD----KLHKEIDEFPAQLN 308
Query: 363 RSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGE-- 420
N M++MP+ + V E +R +PP+ + K ++ + S+ V +G+
Sbjct: 309 YDNV-------MDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKV----GSYVVPKGDII 357
Query: 421 ----MLFGYQPFATKDPKIFE-RAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQ 475
+L + A +P++++ +E V F+G G G +
Sbjct: 358 ACSPLLSHHDEEAFPNPRLWDPERDEKVDGAFIGFG-------------------AGVHK 398
Query: 476 CAGKDFVVLASRLLLVELFLRYD 498
C G+ F +L + +L F YD
Sbjct: 399 CIGQKFALLQVKTILATAFREYD 421
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 350 LHMQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGK-AKRDLIIS 408
+ +L EEI +V+ N T + QM ++ VV E LR+ P +A++ + K+D+ I+
Sbjct: 307 VQQKLQEEIDAVL-PNKAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEIN 364
Query: 409 SHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWS---NGPE 465
+ +G ++ +DPK + E+F+ +RF + + + +++ +GP
Sbjct: 365 G----MFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGP- 419
Query: 466 TENPTVGNKQCAGKDFVVLASRLLLVELFLRY 497
+ C G F ++ +L L+ + +
Sbjct: 420 --------RNCIGMRFALMNMKLALIRVLQNF 443
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 350 LHMQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGK-AKRDLIIS 408
+ +L EEI +V+ N T + QM ++ VV E LR+ P +A++ + K+D+ I+
Sbjct: 305 VQQKLQEEIDAVL-PNKAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEIN 362
Query: 409 SHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWS---NGPE 465
+ +G ++ +DPK + E+F+ +RF + + + +++ +GP
Sbjct: 363 G----MFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGP- 417
Query: 466 TENPTVGNKQCAGKDFVVLASRLLLVELFLRY 497
+ C G F ++ +L L+ + +
Sbjct: 418 --------RNCIGMRFALMNMKLALIRVLQNF 441
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 350 LHMQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGK-AKRDLIIS 408
+ +L EEI +V+ N T + QM ++ VV E LR+ P +A++ + K+D+ I+
Sbjct: 306 VQQKLQEEIDAVL-PNKAPPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEIN 363
Query: 409 SHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWS---NGPE 465
+ +G ++ +DPK + E+F+ +RF + + + +++ +GP
Sbjct: 364 G----MFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGP- 418
Query: 466 TENPTVGNKQCAGKDFVVLASRLLLVELFLRY 497
+ C G F ++ +L L+ + +
Sbjct: 419 --------RNCIGMRFALMNMKLALIRVLQNF 442
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 15/125 (12%)
Query: 374 MEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDP 433
ME+MP+ + E +R +PP+ + K + + + + V EG+++ + +D
Sbjct: 308 MEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQV----GKYVVPEGDIIACSPLLSHQDE 363
Query: 434 KIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVEL 493
+ F E+ +R + K++ G G +C G+ F +L + +L +
Sbjct: 364 EAFPNPREWNPERNM----KLVDGAFCGFG-------AGVHKCIGEKFGLLQVKTVLATV 412
Query: 494 FLRYD 498
YD
Sbjct: 413 LRDYD 417
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 384 VYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFV 443
+ E LR +PPV L + +D ++ E+K+ ++F A +DP+ FE+ + F
Sbjct: 306 IAETLRYKPPVQLIPRQLSQDTVV----GGMEIKKDTIVFCMIGAANRDPEAFEQPDVFN 361
Query: 444 ADR 446
R
Sbjct: 362 IHR 364
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/147 (19%), Positives = 61/147 (41%), Gaps = 14/147 (9%)
Query: 353 QLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEA 412
+L +E++SV+ N + MP++K+ + E +R+ P V + ++
Sbjct: 319 RLLQEVQSVLPDNQTP-RAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVL----G 373
Query: 413 SFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENP-TV 471
+ + +G +L FE + +F +R++ + +K+ P P +
Sbjct: 374 EYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEKKI--------NPFAHLPFGI 425
Query: 472 GNKQCAGKDFVVLASRLLLVELFLRYD 498
G + C G+ L L L + +YD
Sbjct: 426 GKRMCIGRRLAELQLHLALCWIIQKYD 452
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 375 EQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPK 434
E+ ++K++ E LR PPV K K + + ++EGE + + A +D +
Sbjct: 236 EENLYLKAI-EEALRYSPPVMRTVRKTKERVKLGDQT----IEEGEYVRVWIASANRDEE 290
Query: 435 IFERAEEFVADR 446
+F E+F+ DR
Sbjct: 291 VFHDGEKFIPDR 302
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 384 VYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFV 443
+ E LR PPV K K + + ++EGE + + A +D ++F E+F+
Sbjct: 244 IEEALRYSPPVMRTVRKTKERVKLGDQT----IEEGEYVRVWIASANRDEEVFHDGEKFI 299
Query: 444 ADR 446
DR
Sbjct: 300 PDR 302
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 71/166 (42%), Gaps = 19/166 (11%)
Query: 354 LAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEAS 413
L EE+ + R G ++ ++ +P +K+ + E LR+ P + DL++ +
Sbjct: 313 LREEVLNARRQAEGDISKM-LQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDY--- 368
Query: 414 FEVKEGEMLFGYQPFAT-KDPKIFERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVG 472
+ + L +A +DP F ++F R++ + + ++ G G
Sbjct: 369 --LIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWLSKDKDLIHFRNLGFG-------WG 419
Query: 473 NKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSL 518
+QC G+ L L L+ + ++F +++ IG T+ +L
Sbjct: 420 VRQCVGRRIAELEMTLFLIHIL---ENFKVEM--QHIGDVDTIFNL 460
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 32/133 (24%)
Query: 374 MEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDP 433
M++MP+ + E +R +PP+ + K D+ + S+ V +G+++ + D
Sbjct: 322 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKV----GSYVVPKGDIIACSPLLSHHDE 377
Query: 434 KIF--------ERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLA 485
+ F ER E+ V F+G G G +C G+ F +L
Sbjct: 378 EAFPEPRRWDPERDEK-VEGAFIGFG-------------------AGVHKCIGQKFGLLQ 417
Query: 486 SRLLLVELFLRYD 498
+ +L F YD
Sbjct: 418 VKTILATAFRSYD 430
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 32/133 (24%)
Query: 374 MEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDP 433
M++MP+ + E +R +PP+ + K D+ + S+ V +G+++ + D
Sbjct: 322 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKV----GSYVVPKGDIIACSPLLSHHDE 377
Query: 434 KIF--------ERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLA 485
+ F ER E+ V F+G G G +C G+ F +L
Sbjct: 378 EAFPEPRRWDPERDEK-VEGAFIGFG-------------------AGVHKCIGQKFGLLQ 417
Query: 486 SRLLLVELFLRYD 498
+ +L F YD
Sbjct: 418 VKTILATAFRSYD 430
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 32/133 (24%)
Query: 374 MEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDP 433
M++MP+ + E +R +PP+ + K D+ + S+ V +G+++ + D
Sbjct: 309 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKV----GSYVVPKGDIIACSPLLSHHDE 364
Query: 434 KIF--------ERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLA 485
+ F ER E+ V F+G G G +C G+ F +L
Sbjct: 365 EAFPEPRRWDPERDEK-VEGAFIGFG-------------------AGVHKCIGQKFGLLQ 404
Query: 486 SRLLLVELFLRYD 498
+ +L F YD
Sbjct: 405 VKTILATAFRSYD 417
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 32/133 (24%)
Query: 374 MEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDP 433
M++MP+ + E +R +PP+ + K D+ + S+ V +G+++ + D
Sbjct: 308 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKV----GSYVVPKGDIIACSPLLSHHDE 363
Query: 434 KIF--------ERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLA 485
+ F ER E+ V F+G G G +C G+ F +L
Sbjct: 364 EAFPEPRRWDPERDEK-VEGAFIGFG-------------------AGVHKCIGQKFGLLQ 403
Query: 486 SRLLLVELFLRYD 498
+ +L F YD
Sbjct: 404 VKTILATAFRSYD 416
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 32/133 (24%)
Query: 374 MEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDP 433
M++MP+ + E +R +PP+ + K D+ + S+ V +G+++ + D
Sbjct: 310 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKV----GSYVVPKGDIIACSPLLSHHDE 365
Query: 434 KIF--------ERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLA 485
+ F ER E+ V F+G G G +C G+ F +L
Sbjct: 366 EAFPEPRRWDPERDEK-VEGAFIGFG-------------------AGVHKCIGQKFGLLQ 405
Query: 486 SRLLLVELFLRYD 498
+ +L F YD
Sbjct: 406 VKTILATAFRSYD 418
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 32/133 (24%)
Query: 374 MEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDP 433
M++MP+ + E +R +PP+ + K D+ + S+ V +G+++ + D
Sbjct: 309 MDEMPFAERCARESIRRDPPLLMLMRKVMADVKV----GSYVVPKGDIIACSPLLSHHDE 364
Query: 434 KIF--------ERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLA 485
+ F ER E+ V F+G G G +C G+ F +L
Sbjct: 365 EAFPEPRRWDPERDEK-VEGAFIGFG-------------------AGVHKCIGQKFGLLQ 404
Query: 486 SRLLLVELFLRYD 498
+ +L F YD
Sbjct: 405 VKTILATAFRSYD 417
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 374 MEQMPWMKSVVYEVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDP 433
++Q+ ++ V+ E LR+ P AK D ++ + +++G+ L P +D
Sbjct: 308 VKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG---GEYPLEKGDELMVLIPQLHRDK 364
Query: 434 KIF-ERAEEFVADRFVGEGEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVE 492
I+ + EEF +RF + +H G G + C GK F + + L+L
Sbjct: 365 TIWGDDVEEFRPERFENPS-AIPQHAFKPFGN-------GQRACIGKQFALHEATLVLGM 416
Query: 493 LFLRYDSFDIQVGKSAIGSSVTL 515
+ +D D + I ++TL
Sbjct: 417 MLKHFDFEDHTNYELDIKETLTL 439
>pdb|1I1G|A Chain A, Crystal Structure Of The Lrp-Like Transcriptional
Regulator From The Archaeon Pyrococcus Furiosus
pdb|1I1G|B Chain B, Crystal Structure Of The Lrp-Like Transcriptional
Regulator From The Archaeon Pyrococcus Furiosus
Length = 141
Score = 29.6 bits (65), Expect = 3.9, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 430 TKDPKIFERAE-----EFVADRFVGEGEKMLKHVLWSNGPETENPTVGNK 474
TK K+FE AE +FV + ++ G+ M+ V+W+ E + NK
Sbjct: 72 TKPEKLFEVAEKLKEYDFVKELYLSSGDHMIMAVIWAKDGEDLAEIISNK 121
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/178 (19%), Positives = 74/178 (41%), Gaps = 17/178 (9%)
Query: 349 KLHMQLAEEIRSVVRSNGGKVTMAGMEQMPWMKSVVYEVLRMEPPVALQYGKAK-RDLII 407
++ ++ EE+ +V+ + ++ +P+M++ + E R V + RD +
Sbjct: 311 RVQRKIQEELDTVI-GRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSL 369
Query: 408 SSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFV---GEGEKMLKHVLWSNGP 464
F + +G +F Q D K++ EF+ +RF+ G +K+L + G
Sbjct: 370 KG----FYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPDGAIDKVLSEKVIIFG- 424
Query: 465 ETENPTVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGSSVTLTSLKRAS 522
+G ++C G+ L L L R + F + +G + + ++K A
Sbjct: 425 ------MGKRKCIGETIARWEVFLFLAILLQRVE-FSVPLGVKVDMTPIYGLTMKHAC 475
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 16/113 (14%)
Query: 386 EVLRMEPPVALQYGKAKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFERAEEFVAD 445
E LR+ PP + + +R L++ + +G L P+ T+ F E F +
Sbjct: 260 EALRLYPPAWILTRRLERPLLLGEDR----LPQGTTLV-LSPYVTQR-LYFPEGEAFQPE 313
Query: 446 RFVGE-GEKMLKHVLWSNGPETENPTVGNKQCAGKDFVVLASRLLLVELFLRY 497
RF+ E G ++ + +G + C G+DF +L ++L F R+
Sbjct: 314 RFLAERGTPSGRYFPFG---------LGQRLCLGRDFALLEGPIVLRAFFRRF 357
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 380 MKSVVYEVLRMEPPVALQYGK-AKRDLIISSHEASFEVKEGEMLFGYQPFATKDPKIFER 438
M++ + EVLR E + + + A++DL +K+GEM+F P A +D +F R
Sbjct: 287 MRNALDEVLRFENILRIGTVRFARQDL----EYCGASIKKGEMVFLLIPSALRDGTVFSR 342
Query: 439 AEEFVADR 446
+ F R
Sbjct: 343 PDVFDVRR 350
>pdb|3ICJ|A Chain A, Crystal Structure Of An Uncharacterized Metal-Dependent
Hydrolase From Pyrococcus Furiosus
Length = 534
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 23/127 (18%)
Query: 411 EASFEVKEGEMLFGYQPFATKDPKIFERAEEFVADRFVGEGEKMLKHVLWSNG------- 463
+A FE+ E E FA P++ ++ EE +F G ++ L+ +G
Sbjct: 250 KALFEL-EREGRLKMNVFAYLSPELLDKLEELNLGKFEGRRLRIWGVXLFVDGSLGARTA 308
Query: 464 ----PETENPTVGNKQCAGKDFVVLASRLLLVELFLRYDSFDIQVGKSAIGS---SVTLT 516
P T+NPT + KD + VE+ R + V AIG V L
Sbjct: 309 LLSEPYTDNPTTSGELVMNKDEI--------VEVIERAKPLGLDVAVHAIGDKAVDVALD 360
Query: 517 SLKRASF 523
+ + A F
Sbjct: 361 AFEEAEF 367
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,166,824
Number of Sequences: 62578
Number of extensions: 564479
Number of successful extensions: 1345
Number of sequences better than 100.0: 39
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1310
Number of HSP's gapped (non-prelim): 40
length of query: 523
length of database: 14,973,337
effective HSP length: 103
effective length of query: 420
effective length of database: 8,527,803
effective search space: 3581677260
effective search space used: 3581677260
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)