Your job contains 1 sequence.
>039031
MGLGSNDDDDLVVDDGDGDVGDCDSRGKSFRTVSCSICLELVTDNGDRSWAKLQCGHQFH
LDCIGSAFNSKGAMQCPNCRKIEKGQWLYSNGCRSFPEFSMDDWTHDEDLYDLSYSEMSF
GVHWCPFGSLTRLPSSFEEEISSLQKTEVRIGKTESPLNQNVKNGGMGYHDLLGQHAIFA
EHTAVSSATHPCPYIAYFGPIHPSSSNTGGSVSDNSNFNNPWNGPSIHSEMPTSYTFPAM
DLHYHSWDQHSSSFPTSSNRIASSDQTSIPHVTQRSSRTSSDVPRSGSIMHPFLIGHGAR
AGSSVASSMIPPYLGSNTRARDRVQALQAYYQQQQPGNSPAMRAPLIPSARRPGSHRVIS
QVGPVASSSDQNGGFYFFPPGTSGRNFQEAENPPSSRFHTWERDHLPPFSHSQVDRDSSS
SWGAFHLHQVASGSDPGLRPSSLRRRHGSERT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039031
(452 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:1005716577 - symbol:AT3G05545 "AT3G05545" spec... 633 6.2e-62 1
TAIR|locus:2043438 - symbol:RFI2 "RED AND FAR-RED INSENSI... 457 4.5e-58 3
TAIR|locus:2049083 - symbol:AT2G15260 species:3702 "Arabi... 222 4.4e-16 1
TAIR|locus:2140857 - symbol:AT4G13490 species:3702 "Arabi... 199 2.5e-15 1
UNIPROTKB|E7EVC4 - symbol:TRAIP "TRAF-interacting protein... 97 0.00032 1
TAIR|locus:2195871 - symbol:AT1G51930 species:3702 "Arabi... 96 0.00042 1
>TAIR|locus:1005716577 [details] [associations]
symbol:AT3G05545 "AT3G05545" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] InterPro:IPR001841 InterPro:IPR001965 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 HOGENOM:HOG000243234 EMBL:BT001921 EMBL:DQ059111
IPI:IPI00537131 RefSeq:NP_850517.1 UniGene:At.22990
UniGene:At.71225 ProteinModelPortal:Q84WW4 SMR:Q84WW4 PRIDE:Q84WW4
EnsemblPlants:AT3G05545.1 GeneID:819720 KEGG:ath:AT3G05545
TAIR:At3g05545 InParanoid:Q84WW4 OMA:NGDRAWA PhylomeDB:Q84WW4
ProtClustDB:CLSN2918010 Genevestigator:Q84WW4 Uniprot:Q84WW4
Length = 425
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 159/391 (40%), Positives = 201/391 (51%)
Query: 1 MGLGS--NXXXXXXXXXXXXXXXXXXSRGKSFRTVSCSICLELVTDNGDRSWAKLQCGHQ 58
MGLG+ N G F +V+CSICLE V NGDR+WA LQC HQ
Sbjct: 1 MGLGNKGNKFNFGDNDLADEASGADGDEGDGFGSVACSICLETVVKNGDRAWANLQCDHQ 60
Query: 59 FHLDCIGSAFNSKGAMQCPNCRKIEKGQWLYSNGCRSFPEFSMDDWTHDEDLYDL-SYSE 117
FHLDCIGSAFN+KG MQCPNCRK+EKGQWLY+NGCRS+PEF+++DW H+ED+YD+ +YSE
Sbjct: 61 FHLDCIGSAFNAKGVMQCPNCRKVEKGQWLYANGCRSYPEFNVEDWVHEEDIYDIGAYSE 120
Query: 118 MSFGVHWCPFGSLTRLPSSFEEEISSLQKTEVRIGKTESPLNQNVKNGGMGYHDLLGQHA 177
MSFGVHWCPFGS RLPS + E S ++ +G+ G H
Sbjct: 121 MSFGVHWCPFGSSARLPSFEDGEFSPSSYHDL-LGQQGYYTEPAAPTAG---HPC-PYVT 175
Query: 178 IFAEHTAVSSATHPCPYIAYFGPIHPSSSNTGGSVSDNSNFNNPWNGPSIHSEMPTSYTF 237
F + SS++ ++ S NTG SVS P+ P +
Sbjct: 176 YFGPVHSPSSSSGGAAGVSDSSSFS-SHWNTGSSVS--GEVPTPYG-------FPVDPHY 225
Query: 238 PAMDLHYHSWDQHSSSFPTSSNRIASSDQTSIPHVTQRSSRTS-SDV--PRSGSIMHPFL 294
D H F S + S Q + P R+SR + SD+ PR PF
Sbjct: 226 HGWDYHPPP-PPPPQHFSASGAHVGSPTQPTPPPAAARTSRANGSDMIRPRPPHFTRPFH 284
Query: 295 IGHGA--RAGSSVAS-SMIPPYLGSNTRARDRVXXXXX----XXXXXXPGNSPAM-RAPL 346
GH + RAGSSVAS PP+ GSN R RDR+ +SP + R P+
Sbjct: 285 -GHSSSGRAGSSVASVPRTPPFPGSNARTRDRMQALQAYYQQSSAQSHQPDSPIVSRGPV 343
Query: 347 IPSARRPGSHRVISQVGPVASSSDQNGGFYF 377
PS RRP + + S +G +SSSDQ GG F
Sbjct: 344 FPSGRRP-ARGIASGMGSTSSSSDQAGGSGF 373
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 96/251 (38%), Positives = 129/251 (51%)
Query: 169 YHDLLGQHAIFAEHTAVSSATHPCPYIAYFGPIHPSSSNTGGS--VSDNSNFNNPWN-GP 225
YHDLLGQ + E A +A HPCPY+ YFGP+H SS++GG+ VSD+S+F++ WN G
Sbjct: 149 YHDLLGQQGYYTE-PAAPTAGHPCPYVTYFGPVHSPSSSSGGAAGVSDSSSFSSHWNTGS 207
Query: 226 SIHSEMPTSYTFPAMDLHYHSWDQHS------SSFPTSSNRIASSDQTSIPHVTQRSSRT 279
S+ E+PT Y FP +D HYH WD H F S + S Q + P R+SR
Sbjct: 208 SVSGEVPTPYGFP-VDPHYHGWDYHPPPPPPPQHFSASGAHVGSPTQPTPPPAAARTSRA 266
Query: 280 S-SDV--PRSGSIMHPFLIGHGA--RAGSSVAS-SMIPPYLGSNTRARDRVXXXXXXXXX 333
+ SD+ PR PF GH + RAGSSVAS PP+ GSN R RDR+
Sbjct: 267 NGSDMIRPRPPHFTRPFH-GHSSSGRAGSSVASVPRTPPFPGSNARTRDRMQALQAYYQ- 324
Query: 334 XXPGNSPAMRAPLIPSARRPGSHRVISQVGPVASSSDQNGGFYFFPPGTSGRNFQEAENP 393
S A + +P S ++S+ GPV S + G++ + +A
Sbjct: 325 ----QSSAQ-------SHQPDSP-IVSR-GPVFPSGRRPARGIASGMGSTSSSSDQAGGS 371
Query: 394 PSSRFHTWERD 404
RF+ WERD
Sbjct: 372 GFIRFNIWERD 382
>TAIR|locus:2043438 [details] [associations]
symbol:RFI2 "RED AND FAR-RED INSENSITIVE 2" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
EMBL:AC005309 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
UniGene:At.21841 UniGene:At.36327 eggNOG:NOG278755 EMBL:BT002412
EMBL:BT008845 EMBL:DQ086859 IPI:IPI00527893 PIR:E84918
RefSeq:NP_850478.1 ProteinModelPortal:O82239 SMR:O82239
IntAct:O82239 STRING:O82239 EnsemblPlants:AT2G47700.1 GeneID:819383
KEGG:ath:AT2G47700 TAIR:At2g47700 HOGENOM:HOG000243234
InParanoid:O82239 OMA:FNMKGAM PhylomeDB:O82239
ProtClustDB:CLSN2918291 ArrayExpress:O82239 Genevestigator:O82239
Uniprot:O82239
Length = 358
Score = 457 (165.9 bits), Expect = 4.5e-58, Sum P(3) = 4.5e-58
Identities = 81/108 (75%), Positives = 90/108 (83%)
Query: 33 VSCSICLELVTDNGDRSWAKLQCGHQFHLDCIGSAFNSKGAMQCPNCRKIEKGQWLYSNG 92
VSCSICLE V D+G RS AKLQCGHQFHLDCIGSAFN KGAMQCPNCR +EKGQWLY+NG
Sbjct: 36 VSCSICLESVLDDGTRSKAKLQCGHQFHLDCIGSAFNMKGAMQCPNCRNVEKGQWLYANG 95
Query: 93 C-RSFPEFSMDDWTHDEDLYDLSYSEMSFGVHWCPFGSLTRLPSSFEE 139
R FPEFSM+DW +EDLY LSY EM + VHWCPFG L++ +SFEE
Sbjct: 96 STRPFPEFSMEDWIPEEDLYGLSYPEMQYRVHWCPFGELSQAAASFEE 143
Score = 117 (46.2 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 40/141 (28%), Positives = 54/141 (38%)
Query: 245 HSWDQHSSS----FPTSSNRIASSDQTSIPHVTQRSSRTSSDVPRSGSIMHPFLIGHGAR 300
H W+ HS+ P + S S+P S R HPFL H +
Sbjct: 190 HPWNSHSNDHFHQLPVAPQYHHHSPSFSLPAAHVVDGEVDSSAARGLPYAHPFLFSHRSN 249
Query: 301 AGSSVASSMIPPYLGSNTRARDRVXXXXXXXXXXXPGNSPAMRAPLIPSARRPGSHRVIS 360
SS A I Y GS+T+ R++ N P + +PLI RR G +
Sbjct: 250 QRSSPA---INSYQGSSTQMREQ-HHAYNHQRQQHHANGPTLASPLISMTRR-G----LP 300
Query: 361 QVGPVASSSDQNGGFYFFPPG 381
P DQN GF+ +P G
Sbjct: 301 PPPPPPPMPDQNVGFFIYPGG 321
Score = 99 (39.9 bits), Expect = 4.5e-58, Sum P(3) = 4.5e-58
Identities = 31/104 (29%), Positives = 43/104 (41%)
Query: 306 ASSMIPPYLGSNTRARDRVXXXXXXXXXXXPGNSPAMRAPLIPSARRPGSHRVISQVGPV 365
+S I Y GS+T+ R++ N P + +PLI RR G + P
Sbjct: 252 SSPAINSYQGSSTQMREQ-HHAYNHQRQQHHANGPTLASPLISMTRR-G----LPPPPPP 305
Query: 366 ASSSDQNGGFYFFPPGTSGRNFQEAENPPSSRFHTWERDHLPPF 409
DQN GF+ +P G P + + H WERD P F
Sbjct: 306 PPMPDQNVGFFIYPGGH--------HEPETDQIHAWERDWFPHF 341
Score = 70 (29.7 bits), Expect = 4.5e-58, Sum P(3) = 4.5e-58
Identities = 34/115 (29%), Positives = 52/115 (45%)
Query: 176 HAIFAEHTAVSSATHPCPYIAYFGPIHPSSSNTGGSVSDNSNFNNPWNGPSIHSEMPTSY 235
H F H A ++ H Y+AY GP P++ T + +NS ++PWN HS +
Sbjct: 152 HTEFHGHHA-AAVNHS--YLAYVGP-GPAA--TPRTSDNNSTDDHPWNS---HSN-DHFH 201
Query: 236 TFP-AMDLHYHSWDQHSSSFPTS---SNRIASSDQTSIPHV-----TQRSSRTSS 281
P A H+HS S S P + + SS +P+ + RS++ SS
Sbjct: 202 QLPVAPQYHHHS---PSFSLPAAHVVDGEVDSSAARGLPYAHPFLFSHRSNQRSS 253
>TAIR|locus:2049083 [details] [associations]
symbol:AT2G15260 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC007267 IPI:IPI00548037
PIR:G84526 RefSeq:NP_179128.1 UniGene:At.52748
ProteinModelPortal:Q9SHV0 SMR:Q9SHV0 EnsemblPlants:AT2G15260.1
GeneID:816015 KEGG:ath:AT2G15260 TAIR:At2g15260 eggNOG:NOG239624
HOGENOM:HOG000215029 InParanoid:Q9SHV0 OMA:IVKSEVC
ProtClustDB:CLSN2913101 Genevestigator:Q9SHV0 Uniprot:Q9SHV0
Length = 362
Score = 222 (83.2 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 48/104 (46%), Positives = 63/104 (60%)
Query: 35 CSICL-ELVTDNG-DRSWAKLQCGHQFHLDCIGSAFNSKGAMQCPNCRKIEKGQWLYSNG 92
CSIC LV +N R+ L+C H+FHLDCIGSA+N+KG M+CPNCR IE G W +S+G
Sbjct: 123 CSICRGALVNENDVQRTLVTLKCVHKFHLDCIGSAYNAKGFMECPNCRNIEPGHWQFSDG 182
Query: 93 CRSFPEFSMDDWTHDEDLYDL-SYSEMSFGVHWCPFGSL-TRLP 134
P + + +E+ D S+S+M CPFG L R P
Sbjct: 183 THFNPNGMIANNEEEEEDNDPGSFSQMIVKSEVCPFGCLGQRYP 226
>TAIR|locus:2140857 [details] [associations]
symbol:AT4G13490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AL049656 EMBL:AL161536 IPI:IPI00537652 PIR:T06651
RefSeq:NP_193085.1 UniGene:At.54307 ProteinModelPortal:Q9T0H0
SMR:Q9T0H0 EnsemblPlants:AT4G13490.1 GeneID:826981
KEGG:ath:AT4G13490 TAIR:At4g13490 eggNOG:NOG279419
HOGENOM:HOG000153579 InParanoid:Q9T0H0 OMA:KMECPCC PhylomeDB:Q9T0H0
ProtClustDB:CLSN2916123 Genevestigator:Q9T0H0 Uniprot:Q9T0H0
Length = 226
Score = 199 (75.1 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 35 CSICLE-LVTDNGDRSWAKLQCGHQFHLDCIGSAFNSKGAMQCPNCRKIEKGQWLYSNGC 93
C++CLE L D +R+ KL+C H+FHLDC+GS+FN K M+CP CR+IEKG+WL++
Sbjct: 22 CAVCLEPLANDADERTVVKLRCSHKFHLDCVGSSFNIKNKMECPCCRQIEKGKWLFAEPV 81
Query: 94 RSFPEFSM 101
E M
Sbjct: 82 DQLEEDDM 89
>UNIPROTKB|E7EVC4 [details] [associations]
symbol:TRAIP "TRAF-interacting protein" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC139451 HGNC:HGNC:30764 ChiTaRS:TRAIP IPI:IPI00946250
ProteinModelPortal:E7EVC4 SMR:E7EVC4 Ensembl:ENST00000473195
ArrayExpress:E7EVC4 Bgee:E7EVC4 Uniprot:E7EVC4
Length = 99
Score = 97 (39.2 bits), Expect = 0.00032, P = 0.00032
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 35 CSICLELVTDNGDRSWAKLQCGHQFHLDCIGSAFNSKGAMQCPNCRKIEKGQ 86
C+IC + D+ R A + CGH FHL C+ F + + CP CR I+ G+
Sbjct: 7 CTICSDFF-DHS-RDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCR-IQVGK 55
>TAIR|locus:2195871 [details] [associations]
symbol:AT1G51930 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT015124 EMBL:BT015636
IPI:IPI00533509 RefSeq:NP_175605.1 UniGene:At.64866
ProteinModelPortal:Q6AWX4 SMR:Q6AWX4 EnsemblPlants:AT1G51930.1
GeneID:841621 KEGG:ath:AT1G51930 TAIR:At1g51930 eggNOG:NOG294426
HOGENOM:HOG000141530 InParanoid:Q6AWX4 OMA:EEYEDDH PhylomeDB:Q6AWX4
ProtClustDB:CLSN2914693 Genevestigator:Q6AWX4 Uniprot:Q6AWX4
Length = 132
Score = 96 (38.9 bits), Expect = 0.00042, P = 0.00042
Identities = 25/56 (44%), Positives = 29/56 (51%)
Query: 27 GKSFRTVSCSICLELVTDNGDRSWAKLQ-CGHQFHLDCIGSAFNSKGAMQCPNCRK 81
GK F C ICLE D D +L+ CGH FHL CI S K CP+CR+
Sbjct: 76 GKRF----CPICLEEYED--DHQIRRLRNCGHVFHLLCIDSWLTQK--QNCPSCRR 123
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 452 411 0.00080 118 3 11 22 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 621 (66 KB)
Total size of DFA: 299 KB (2153 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.85u 0.13s 38.98t Elapsed: 00:00:02
Total cpu time: 38.85u 0.13s 38.98t Elapsed: 00:00:02
Start: Fri May 10 06:00:12 2013 End: Fri May 10 06:00:14 2013