Query 039039
Match_columns 398
No_of_seqs 319 out of 1497
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 09:10:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039039.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039039hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ef1_A RNA polymerase II subun 100.0 3.6E-72 1.2E-76 566.8 27.4 319 68-398 1-441 (442)
2 3ef0_A RNA polymerase II subun 100.0 4.1E-68 1.4E-72 530.7 25.4 310 77-398 2-371 (372)
3 3qle_A TIM50P; chaperone, mito 100.0 3.6E-37 1.2E-41 283.6 15.2 157 90-312 31-190 (204)
4 2ght_A Carboxy-terminal domain 100.0 4.7E-34 1.6E-38 258.6 15.8 166 89-309 11-181 (181)
5 3shq_A UBLCP1; phosphatase, hy 100.0 3.1E-32 1.1E-36 266.9 9.3 157 89-309 136-309 (320)
6 2hhl_A CTD small phosphatase-l 100.0 5E-31 1.7E-35 241.5 16.0 155 90-288 25-184 (195)
7 3l3e_A DNA topoisomerase 2-bin 99.8 2.1E-20 7.2E-25 154.7 8.7 90 309-398 10-102 (107)
8 3l46_A Protein ECT2; alternati 99.8 5E-21 1.7E-25 159.5 2.4 95 304-398 11-105 (112)
9 2cou_A ECT2 protein; BRCT doma 99.8 1.3E-20 4.4E-25 156.7 1.6 91 308-398 6-96 (109)
10 2d8m_A DNA-repair protein XRCC 99.8 2.5E-19 8.5E-24 153.2 7.0 88 311-398 19-106 (129)
11 3pa6_A Microcephalin; BRCT dom 99.7 2E-18 6.9E-23 142.8 8.1 90 309-398 2-95 (107)
12 4id3_A DNA repair protein REV1 99.7 2.5E-18 8.5E-23 137.6 7.9 86 311-398 4-91 (92)
13 2ebw_A DNA repair protein REV1 99.7 2E-17 6.7E-22 134.1 7.3 86 311-398 9-95 (97)
14 3olc_X DNA topoisomerase 2-bin 99.7 1E-16 3.4E-21 155.7 8.1 92 307-398 192-284 (298)
15 1wf6_A Similar to S.pombe -RAD 99.6 4E-16 1.4E-20 133.8 8.1 97 301-398 27-126 (132)
16 3pc6_A DNA repair protein XRCC 99.6 2.7E-15 9.2E-20 123.1 8.5 86 313-398 6-94 (104)
17 1l0b_A BRCA1; TANDEM-BRCT, thr 99.6 1.3E-15 4.4E-20 141.7 6.8 88 311-398 1-94 (229)
18 2nte_A BARD-1, BRCA1-associate 99.6 4.3E-15 1.5E-19 136.7 7.7 83 316-398 1-86 (210)
19 3sqd_A PAX-interacting protein 99.5 5.1E-15 1.7E-19 137.5 6.6 89 309-398 8-97 (219)
20 1t15_A Breast cancer type 1 su 99.5 6.4E-15 2.2E-19 135.2 6.5 83 316-398 3-91 (214)
21 2etx_A Mediator of DNA damage 99.5 4.4E-14 1.5E-18 130.1 7.7 85 310-398 5-90 (209)
22 3al2_A DNA topoisomerase 2-bin 99.4 1.1E-13 3.8E-18 129.8 7.6 85 314-398 6-93 (235)
23 3olc_X DNA topoisomerase 2-bin 99.4 1.7E-13 5.8E-18 132.9 7.6 83 312-394 103-185 (298)
24 3u3z_A Microcephalin; DNA repa 99.4 4E-13 1.4E-17 122.9 7.1 82 317-398 11-94 (199)
25 3l41_A BRCT-containing protein 99.3 6E-13 2E-17 123.6 6.1 81 314-398 5-86 (220)
26 2jw5_A DNA polymerase lambda; 99.3 6.2E-12 2.1E-16 103.6 6.9 90 309-398 6-103 (106)
27 1l7b_A DNA ligase; BRCT, autos 99.2 1.2E-11 4.2E-16 99.1 7.0 76 312-387 5-80 (92)
28 1kzy_C Tumor suppressor P53-bi 99.2 1.2E-11 4.1E-16 117.6 7.7 88 311-398 12-135 (259)
29 3ii6_X DNA ligase 4; XRCC4, NH 99.2 1.6E-11 5.4E-16 117.0 8.4 90 307-397 3-94 (263)
30 3ii6_X DNA ligase 4; XRCC4, NH 99.2 6.6E-12 2.3E-16 119.6 5.7 89 310-398 160-263 (263)
31 2vxb_A DNA repair protein RHP9 99.2 3E-11 1E-15 113.7 8.2 86 313-398 1-116 (241)
32 2k6g_A Replication factor C su 99.1 9.9E-11 3.4E-15 96.7 8.6 81 308-388 26-108 (109)
33 2ebu_A Replication factor C su 99.1 2.3E-10 7.8E-15 94.9 8.4 81 307-387 15-97 (112)
34 2ep8_A Pescadillo homolog 1; A 99.1 2.5E-10 8.6E-15 92.9 7.7 81 311-397 9-100 (100)
35 2cok_A Poly [ADP-ribose] polym 99.0 5.2E-10 1.8E-14 92.9 7.4 74 312-385 8-84 (113)
36 1z56_C DNA ligase IV; DNA repa 99.0 1.2E-10 4.3E-15 110.4 3.6 90 309-398 155-261 (264)
37 3pc7_A DNA ligase 3; DNA repai 98.9 1.3E-09 4.4E-14 86.3 6.1 77 309-394 11-88 (88)
38 2coe_A Deoxynucleotidyltransfe 98.9 6.9E-09 2.3E-13 86.9 8.9 86 312-397 18-112 (120)
39 1z56_C DNA ligase IV; DNA repa 98.8 3.7E-10 1.3E-14 107.1 0.2 86 311-397 2-99 (264)
40 1l0b_A BRCA1; TANDEM-BRCT, thr 98.7 1.3E-08 4.5E-13 94.1 6.0 88 311-398 114-212 (229)
41 1t15_A Breast cancer type 1 su 98.7 9.5E-09 3.3E-13 93.8 4.8 88 311-398 112-210 (214)
42 3u3z_A Microcephalin; DNA repa 98.6 1.8E-08 6.1E-13 91.9 4.3 82 310-398 115-197 (199)
43 2dun_A POL MU, DNA polymerase 98.5 1.6E-07 5.3E-12 79.4 6.5 84 313-396 9-104 (133)
44 2etx_A Mediator of DNA damage 98.4 2.6E-07 8.7E-12 84.7 6.5 87 311-398 112-201 (209)
45 3kbb_A Phosphorylated carbohyd 98.4 4.8E-07 1.6E-11 81.2 6.8 82 152-235 82-170 (216)
46 2wm8_A MDP-1, magnesium-depend 98.4 8.3E-07 2.8E-11 78.8 8.0 93 152-245 66-160 (187)
47 1kzy_C Tumor suppressor P53-bi 98.3 5.6E-07 1.9E-11 85.3 6.8 86 311-396 152-249 (259)
48 2nte_A BARD-1, BRCA1-associate 98.3 4.5E-07 1.6E-11 82.8 4.5 84 311-394 101-209 (210)
49 3ib6_A Uncharacterized protein 98.2 1E-06 3.5E-11 78.4 4.5 77 153-231 33-123 (189)
50 3m9l_A Hydrolase, haloacid deh 98.1 6.9E-06 2.4E-10 72.9 9.0 86 150-236 66-158 (205)
51 2pr7_A Haloacid dehalogenase/e 98.1 7.2E-07 2.5E-11 73.9 1.1 89 155-245 19-114 (137)
52 2fpr_A Histidine biosynthesis 98.1 1.2E-05 4.2E-10 70.9 8.8 120 89-245 10-156 (176)
53 1dgs_A DNA ligase; AMP complex 98.0 6.3E-07 2.2E-11 95.0 0.0 77 312-388 585-661 (667)
54 2owo_A DNA ligase; protein-DNA 98.0 9.7E-07 3.3E-11 93.6 0.0 73 313-385 596-669 (671)
55 3kzx_A HAD-superfamily hydrola 98.0 2E-05 6.9E-10 70.9 8.7 82 152-235 101-190 (231)
56 3m1y_A Phosphoserine phosphata 97.9 8.9E-06 3E-10 72.4 5.7 91 153-245 74-181 (217)
57 3sqd_A PAX-interacting protein 97.9 1.9E-05 6.6E-10 72.8 8.0 86 311-397 119-217 (219)
58 3umb_A Dehalogenase-like hydro 97.9 5E-05 1.7E-09 68.1 10.5 91 153-245 98-195 (233)
59 2zg6_A Putative uncharacterize 97.9 1.4E-05 4.6E-10 72.2 6.6 90 151-246 92-189 (220)
60 1zrn_A L-2-haloacid dehalogena 97.9 3.4E-05 1.2E-09 69.4 9.2 79 153-233 94-179 (232)
61 3l8h_A Putative haloacid dehal 97.9 2.9E-05 9.9E-10 67.7 8.1 87 153-243 26-139 (179)
62 3ed5_A YFNB; APC60080, bacillu 97.9 2E-05 6.8E-10 70.8 7.2 78 153-232 102-186 (238)
63 3um9_A Haloacid dehalogenase, 97.9 4.1E-05 1.4E-09 68.4 9.3 79 153-233 95-180 (230)
64 3s6j_A Hydrolase, haloacid deh 97.9 2E-05 6.9E-10 70.5 6.8 89 153-243 90-185 (233)
65 2gmw_A D,D-heptose 1,7-bisphos 97.9 2.3E-05 7.9E-10 70.9 7.2 107 90-235 22-161 (211)
66 2no4_A (S)-2-haloacid dehaloge 97.9 4.6E-05 1.6E-09 69.1 9.1 79 153-233 104-189 (240)
67 2i6x_A Hydrolase, haloacid deh 97.8 9.7E-06 3.3E-10 71.9 3.3 95 152-248 87-193 (211)
68 2vxb_A DNA repair protein RHP9 97.8 2.9E-05 9.9E-10 72.6 6.2 79 310-392 147-240 (241)
69 2p9j_A Hypothetical protein AQ 97.8 2.3E-05 8E-10 67.4 5.2 114 94-246 10-124 (162)
70 4dcc_A Putative haloacid dehal 97.7 1.5E-05 5E-10 72.2 2.7 94 154-248 112-216 (229)
71 4eze_A Haloacid dehalogenase-l 97.7 4.2E-05 1.4E-09 74.2 5.9 92 153-245 178-285 (317)
72 3nuq_A Protein SSM1, putative 97.7 0.00017 6E-09 67.2 10.0 81 153-235 141-235 (282)
73 3zvl_A Bifunctional polynucleo 97.7 3.2E-05 1.1E-09 77.9 5.1 107 90-232 55-184 (416)
74 2oda_A Hypothetical protein ps 97.6 3.2E-05 1.1E-09 69.6 4.4 85 153-244 35-127 (196)
75 1nnl_A L-3-phosphoserine phosp 97.6 7.3E-05 2.5E-09 67.2 6.6 89 153-243 85-192 (225)
76 3t7k_A RTT107, regulator of TY 97.6 0.00018 6.1E-09 67.0 9.0 97 302-398 7-118 (256)
77 3iru_A Phoshonoacetaldehyde hy 97.6 7.3E-05 2.5E-09 68.8 6.0 90 153-243 110-207 (277)
78 4gib_A Beta-phosphoglucomutase 97.6 2.1E-05 7E-10 72.8 1.9 87 154-244 116-209 (250)
79 3nvb_A Uncharacterized protein 97.6 6.3E-05 2.2E-09 75.0 5.5 133 75-237 205-343 (387)
80 3dv9_A Beta-phosphoglucomutase 97.5 0.00015 5.1E-09 65.5 7.5 89 153-243 107-203 (247)
81 3fvv_A Uncharacterized protein 97.5 4.1E-05 1.4E-09 69.1 3.6 81 154-235 92-191 (232)
82 3qxg_A Inorganic pyrophosphata 97.5 0.00016 5.5E-09 65.6 6.8 89 153-243 108-204 (243)
83 3ij5_A 3-deoxy-D-manno-octulos 97.4 0.00031 1E-08 64.1 7.7 149 94-286 50-199 (211)
84 3al2_A DNA topoisomerase 2-bin 97.4 7.8E-05 2.7E-09 69.4 3.4 86 312-398 133-228 (235)
85 2o2x_A Hypothetical protein; s 97.4 0.00026 8.9E-09 64.0 6.5 77 154-233 56-165 (218)
86 2b0c_A Putative phosphatase; a 97.3 1.4E-05 4.9E-10 70.4 -2.0 94 152-247 89-190 (206)
87 3e8m_A Acylneuraminate cytidyl 97.3 4.9E-05 1.7E-09 65.4 1.3 87 154-247 33-120 (164)
88 2i7d_A 5'(3')-deoxyribonucleot 97.3 2.5E-05 8.6E-10 69.4 -0.7 67 153-232 72-140 (193)
89 3p96_A Phosphoserine phosphata 97.3 0.00015 5.1E-09 72.5 4.8 93 153-246 255-363 (415)
90 3mn1_A Probable YRBI family ph 97.3 0.00022 7.5E-09 63.4 5.0 115 93-246 19-134 (189)
91 1k1e_A Deoxy-D-mannose-octulos 97.2 0.0003 1E-08 61.9 4.9 114 94-246 9-123 (180)
92 1q92_A 5(3)-deoxyribonucleotid 97.2 2.5E-05 8.6E-10 69.7 -2.3 45 153-197 74-120 (197)
93 3kd3_A Phosphoserine phosphohy 97.1 0.00022 7.7E-09 62.6 3.5 82 154-235 82-177 (219)
94 3n07_A 3-deoxy-D-manno-octulos 97.1 0.00012 4E-09 66.0 1.5 114 163-286 61-175 (195)
95 3mmz_A Putative HAD family hyd 97.1 0.00038 1.3E-08 61.2 4.7 83 155-245 42-125 (176)
96 3skx_A Copper-exporting P-type 97.1 0.0023 8E-08 58.9 9.9 84 154-245 144-228 (280)
97 3n1u_A Hydrolase, HAD superfam 97.0 0.00014 4.9E-09 64.9 1.0 114 162-285 54-168 (191)
98 1l7m_A Phosphoserine phosphata 96.9 0.00093 3.2E-08 58.4 5.7 92 153-245 75-182 (211)
99 3pct_A Class C acid phosphatas 96.9 0.0032 1.1E-07 59.3 9.5 123 91-235 56-186 (260)
100 3huf_A DNA repair and telomere 96.9 0.0008 2.8E-08 64.7 5.3 55 331-386 127-186 (325)
101 2r8e_A 3-deoxy-D-manno-octulos 96.9 0.0023 8E-08 56.5 8.0 81 161-246 60-141 (188)
102 4ap9_A Phosphoserine phosphata 96.9 0.0002 6.7E-09 62.4 0.9 88 153-245 78-173 (201)
103 2ah5_A COG0546: predicted phos 96.8 0.0012 4.1E-08 58.8 5.6 91 153-245 83-177 (210)
104 2gfh_A Haloacid dehalogenase-l 96.8 0.0012 4.2E-08 61.2 5.6 81 153-235 120-208 (260)
105 3ocu_A Lipoprotein E; hydrolas 96.8 0.0037 1.3E-07 59.0 8.5 125 90-236 55-187 (262)
106 2i33_A Acid phosphatase; HAD s 96.8 0.0013 4.5E-08 61.8 5.4 124 90-236 56-186 (258)
107 2pib_A Phosphorylated carbohyd 96.7 0.002 6.9E-08 56.1 5.5 81 153-235 83-170 (216)
108 3e58_A Putative beta-phosphogl 96.6 0.0034 1.2E-07 54.6 6.3 82 153-236 88-176 (214)
109 3qnm_A Haloacid dehalogenase-l 96.5 0.0031 1.1E-07 56.1 6.1 78 153-232 106-189 (240)
110 1rku_A Homoserine kinase; phos 96.5 0.0026 8.9E-08 56.0 5.5 93 153-246 68-169 (206)
111 2nyv_A Pgpase, PGP, phosphogly 96.5 0.0035 1.2E-07 56.2 6.3 91 152-244 81-178 (222)
112 2hi0_A Putative phosphoglycola 96.5 0.0035 1.2E-07 56.9 6.1 89 153-244 109-204 (240)
113 3sd7_A Putative phosphatase; s 96.4 0.003 1E-07 56.8 5.5 89 153-243 109-205 (240)
114 2hoq_A Putative HAD-hydrolase 96.4 0.0034 1.2E-07 56.7 5.8 78 153-232 93-177 (241)
115 2hsz_A Novel predicted phospha 96.4 0.0047 1.6E-07 56.2 6.3 81 153-235 113-200 (243)
116 2hdo_A Phosphoglycolate phosph 96.3 0.0032 1.1E-07 55.4 4.4 92 153-246 82-179 (209)
117 4gns_A Chitin biosynthesis pro 96.3 0.0066 2.3E-07 53.2 6.2 89 304-392 151-247 (290)
118 3mc1_A Predicted phosphatase, 96.2 0.0037 1.3E-07 55.4 4.6 89 153-243 85-180 (226)
119 4ex6_A ALNB; modified rossman 96.2 0.0053 1.8E-07 54.8 5.7 89 153-243 103-198 (237)
120 1qq5_A Protein (L-2-haloacid d 96.1 0.0064 2.2E-07 55.4 5.6 90 153-245 92-187 (253)
121 1yns_A E-1 enzyme; hydrolase f 96.0 0.0063 2.1E-07 56.6 5.4 88 153-243 129-225 (261)
122 2w43_A Hypothetical 2-haloalka 96.0 0.0054 1.9E-07 53.7 4.4 88 153-245 73-166 (201)
123 4eek_A Beta-phosphoglucomutase 95.9 0.0055 1.9E-07 55.8 4.5 91 153-244 109-207 (259)
124 3u26_A PF00702 domain protein; 95.9 0.0058 2E-07 54.3 4.5 78 153-232 99-182 (234)
125 2obb_A Hypothetical protein; s 95.9 0.015 5.1E-07 49.7 6.6 74 156-233 26-100 (142)
126 2hcf_A Hydrolase, haloacid deh 95.9 0.014 4.8E-07 51.7 6.8 90 153-244 92-192 (234)
127 3l41_A BRCT-containing protein 95.7 0.016 5.3E-07 53.2 6.3 86 311-396 110-212 (220)
128 4g9b_A Beta-PGM, beta-phosphog 95.7 0.0081 2.8E-07 54.9 4.4 87 154-244 95-188 (243)
129 3oq0_A DBF4, protein DNA52; DD 95.7 0.032 1.1E-06 47.7 7.6 74 313-386 19-113 (151)
130 3cnh_A Hydrolase family protei 95.6 0.0077 2.6E-07 52.5 3.9 90 154-245 86-181 (200)
131 3ddh_A Putative haloacid dehal 95.5 0.012 4.1E-07 51.7 4.9 79 152-232 103-184 (234)
132 1qyi_A ZR25, hypothetical prot 95.5 0.0092 3.2E-07 59.3 4.5 91 153-244 214-337 (384)
133 3qbz_A DDK kinase regulatory s 95.5 0.017 5.9E-07 49.8 5.3 66 313-378 57-143 (160)
134 2b82_A APHA, class B acid phos 95.4 0.0024 8.2E-08 57.8 -0.1 37 154-190 88-125 (211)
135 2pke_A Haloacid delahogenase-l 95.3 0.013 4.6E-07 53.0 4.6 78 153-232 111-189 (251)
136 3smv_A S-(-)-azetidine-2-carbo 95.3 0.012 4E-07 52.2 3.9 76 153-232 98-182 (240)
137 2l42_A DNA-binding protein RAP 95.2 0.012 4.2E-07 46.7 3.3 78 313-398 10-94 (106)
138 3a1c_A Probable copper-exporti 95.2 0.053 1.8E-06 50.9 8.5 84 153-244 162-246 (287)
139 3k1z_A Haloacid dehalogenase-l 95.2 0.014 4.8E-07 53.7 4.2 92 153-248 105-205 (263)
140 3nas_A Beta-PGM, beta-phosphog 95.1 0.016 5.6E-07 51.4 4.5 88 155-246 93-187 (233)
141 2om6_A Probable phosphoserine 95.1 0.021 7.3E-07 50.3 5.1 76 155-232 100-185 (235)
142 3umc_A Haloacid dehalogenase; 95.0 0.016 5.5E-07 52.1 4.1 89 153-245 119-213 (254)
143 2fea_A 2-hydroxy-3-keto-5-meth 95.0 0.016 5.6E-07 52.4 4.1 91 153-248 76-189 (236)
144 1te2_A Putative phosphatase; s 94.8 0.046 1.6E-06 47.7 6.4 91 153-245 93-190 (226)
145 3d6j_A Putative haloacid dehal 94.8 0.047 1.6E-06 47.6 6.4 91 153-245 88-185 (225)
146 2go7_A Hydrolase, haloacid deh 94.7 0.042 1.4E-06 47.0 5.9 81 153-236 84-171 (207)
147 3gyg_A NTD biosynthesis operon 94.5 0.06 2.1E-06 50.2 6.6 24 155-178 123-148 (289)
148 3umg_A Haloacid dehalogenase; 94.4 0.016 5.5E-07 51.8 2.5 89 153-245 115-209 (254)
149 1ltq_A Polynucleotide kinase; 94.2 0.0087 3E-07 56.5 0.1 88 153-244 187-292 (301)
150 2qlt_A (DL)-glycerol-3-phospha 94.2 0.076 2.6E-06 49.1 6.6 89 153-244 113-216 (275)
151 3oq4_A DBF4, protein DNA52; DD 94.2 0.16 5.5E-06 42.6 7.7 68 317-384 7-94 (134)
152 1wr8_A Phosphoglycolate phosph 94.1 0.071 2.4E-06 48.2 6.1 38 157-194 23-61 (231)
153 1l6r_A Hypothetical protein TA 93.8 0.051 1.8E-06 49.3 4.6 40 155-194 23-63 (227)
154 2g80_A Protein UTR4; YEL038W, 93.8 0.019 6.4E-07 53.5 1.6 88 153-245 124-227 (253)
155 3l5k_A Protein GS1, haloacid d 93.8 0.033 1.1E-06 50.2 3.2 90 153-244 111-212 (250)
156 2fi1_A Hydrolase, haloacid deh 93.7 0.098 3.4E-06 44.6 5.9 86 155-245 83-175 (190)
157 3kc2_A Uncharacterized protein 93.6 0.12 4.1E-06 50.6 7.0 66 92-204 12-82 (352)
158 3mpo_A Predicted hydrolase of 93.5 0.1 3.4E-06 48.1 6.1 37 157-193 25-62 (279)
159 2p11_A Hypothetical protein; p 93.5 0.038 1.3E-06 49.6 3.0 78 153-233 95-172 (231)
160 1xpj_A Hypothetical protein; s 93.4 0.038 1.3E-06 45.6 2.7 26 155-180 25-51 (126)
161 3ewi_A N-acylneuraminate cytid 93.3 0.042 1.5E-06 47.9 3.0 147 93-286 9-158 (168)
162 3i28_A Epoxide hydrolase 2; ar 93.3 0.053 1.8E-06 54.0 4.0 79 153-235 99-190 (555)
163 2fdr_A Conserved hypothetical 93.1 0.057 1.9E-06 47.5 3.6 81 153-236 86-174 (229)
164 4dw8_A Haloacid dehalogenase-l 92.9 0.12 4.3E-06 47.5 5.7 36 157-192 25-61 (279)
165 3bwv_A Putative 5'(3')-deoxyri 92.9 0.19 6.4E-06 43.2 6.5 78 153-245 68-151 (180)
166 3pgv_A Haloacid dehalogenase-l 92.9 0.09 3.1E-06 49.0 4.7 59 91-193 19-78 (285)
167 3dnp_A Stress response protein 92.9 0.12 4.1E-06 47.9 5.6 37 157-193 26-63 (290)
168 1xvi_A MPGP, YEDP, putative ma 92.8 0.17 5.8E-06 47.1 6.5 38 157-194 29-67 (275)
169 3epr_A Hydrolase, haloacid deh 92.7 0.072 2.5E-06 49.0 3.7 21 157-177 24-45 (264)
170 3qgm_A P-nitrophenyl phosphata 92.6 0.22 7.5E-06 45.5 6.9 37 157-193 27-67 (268)
171 1nrw_A Hypothetical protein, h 92.2 0.17 5.8E-06 47.2 5.7 37 157-193 24-61 (288)
172 2wf7_A Beta-PGM, beta-phosphog 92.2 0.11 3.7E-06 45.2 4.1 90 153-246 90-186 (221)
173 1swv_A Phosphonoacetaldehyde h 92.1 0.11 3.8E-06 47.1 4.2 82 153-235 102-191 (267)
174 3vay_A HAD-superfamily hydrola 92.1 0.043 1.5E-06 48.4 1.3 73 153-232 104-182 (230)
175 2pq0_A Hypothetical conserved 91.9 0.13 4.4E-06 46.9 4.4 15 94-108 4-18 (258)
176 1nf2_A Phosphatase; structural 91.3 0.27 9.2E-06 45.3 5.9 38 157-194 22-59 (268)
177 1vjr_A 4-nitrophenylphosphatas 90.6 0.41 1.4E-05 43.6 6.5 20 88-108 13-32 (271)
178 3n28_A Phosphoserine phosphata 90.5 0.24 8.1E-06 47.4 4.9 93 153-246 177-285 (335)
179 1rkq_A Hypothetical protein YI 90.4 0.23 7.8E-06 46.2 4.5 37 157-193 25-62 (282)
180 3pdw_A Uncharacterized hydrola 90.3 0.24 8.3E-06 45.2 4.5 16 93-108 6-21 (266)
181 3dao_A Putative phosphatse; st 90.0 0.22 7.5E-06 46.3 4.1 60 90-192 18-78 (283)
182 1zjj_A Hypothetical protein PH 90.0 0.25 8.7E-06 45.2 4.4 14 95-108 3-16 (263)
183 2yj3_A Copper-transporting ATP 89.5 0.058 2E-06 50.1 0.0 86 153-245 135-221 (263)
184 3fzq_A Putative hydrolase; YP_ 89.8 0.15 5.2E-06 46.5 2.8 16 94-109 6-21 (274)
185 2hx1_A Predicted sugar phospha 89.7 0.57 2E-05 43.2 6.7 37 157-193 33-73 (284)
186 2zos_A MPGP, mannosyl-3-phosph 89.5 0.4 1.4E-05 43.7 5.4 35 159-193 22-57 (249)
187 2b30_A Pvivax hypothetical pro 88.6 0.53 1.8E-05 44.4 5.6 35 157-191 48-85 (301)
188 2fue_A PMM 1, PMMH-22, phospho 88.4 0.5 1.7E-05 43.4 5.2 17 92-108 12-28 (262)
189 1s2o_A SPP, sucrose-phosphatas 88.1 0.42 1.5E-05 43.5 4.4 33 159-191 24-56 (244)
190 2oyc_A PLP phosphatase, pyrido 87.7 0.81 2.8E-05 42.9 6.3 21 157-177 40-61 (306)
191 2amy_A PMM 2, phosphomannomuta 87.2 0.74 2.5E-05 41.6 5.5 17 92-108 5-21 (246)
192 2x4d_A HLHPP, phospholysine ph 86.9 1.6 5.6E-05 38.9 7.7 15 94-108 13-27 (271)
193 3l7y_A Putative uncharacterize 86.8 0.29 9.8E-06 46.0 2.5 17 93-109 37-53 (304)
194 3f9r_A Phosphomannomutase; try 86.8 0.72 2.5E-05 42.2 5.2 16 93-108 4-19 (246)
195 1yv9_A Hydrolase, haloacid deh 86.8 0.49 1.7E-05 43.0 4.1 16 93-108 5-20 (264)
196 2ho4_A Haloacid dehalogenase-l 86.0 0.65 2.2E-05 41.6 4.4 16 94-109 8-23 (259)
197 1rlm_A Phosphatase; HAD family 85.8 0.42 1.4E-05 44.0 3.0 15 94-108 4-18 (271)
198 2rbk_A Putative uncharacterize 84.8 0.21 7.2E-06 45.7 0.5 15 95-109 4-18 (261)
199 3r4c_A Hydrolase, haloacid deh 84.6 0.52 1.8E-05 42.9 3.1 15 93-107 12-26 (268)
200 3bwv_A Putative 5'(3')-deoxyri 82.8 0.37 1.2E-05 41.4 1.1 16 94-109 5-20 (180)
201 1u02_A Trehalose-6-phosphate p 82.1 0.85 2.9E-05 41.3 3.4 33 157-190 26-59 (239)
202 2p11_A Hypothetical protein; p 80.0 0.57 2E-05 41.7 1.4 18 92-109 10-27 (231)
203 2hcf_A Hydrolase, haloacid deh 79.0 0.78 2.7E-05 40.1 2.0 16 94-109 5-20 (234)
204 2ah5_A COG0546: predicted phos 78.9 0.71 2.4E-05 40.3 1.6 16 94-109 5-20 (210)
205 3d6j_A Putative haloacid dehal 78.2 0.75 2.6E-05 39.6 1.6 16 94-109 7-22 (225)
206 2fi1_A Hydrolase, haloacid deh 77.7 0.67 2.3E-05 39.2 1.1 43 332-384 142-184 (190)
207 2w43_A Hypothetical 2-haloalka 77.4 0.75 2.6E-05 39.6 1.3 15 95-109 3-17 (201)
208 2hdo_A Phosphoglycolate phosph 76.4 0.87 3E-05 39.3 1.5 16 94-109 5-20 (209)
209 3zx4_A MPGP, mannosyl-3-phosph 76.4 0.79 2.7E-05 41.7 1.2 15 94-108 1-15 (259)
210 2go7_A Hydrolase, haloacid deh 76.4 0.87 3E-05 38.5 1.4 16 94-109 5-20 (207)
211 2hi0_A Putative phosphoglycola 76.3 0.86 2.9E-05 40.6 1.5 16 94-109 5-20 (240)
212 3e58_A Putative beta-phosphogl 75.8 0.96 3.3E-05 38.5 1.6 17 93-109 5-21 (214)
213 2pke_A Haloacid delahogenase-l 75.5 0.9 3.1E-05 40.6 1.3 16 94-109 14-29 (251)
214 3cnh_A Hydrolase family protei 75.2 0.95 3.2E-05 38.7 1.4 15 94-108 5-19 (200)
215 2hsz_A Novel predicted phospha 75.0 1.1 3.6E-05 40.3 1.7 20 89-109 20-39 (243)
216 4ex6_A ALNB; modified rossman 75.0 1.1 3.6E-05 39.4 1.7 19 91-109 17-35 (237)
217 4fe3_A Cytosolic 5'-nucleotida 74.9 2.2 7.5E-05 39.8 3.9 42 152-193 139-181 (297)
218 2c4n_A Protein NAGD; nucleotid 74.9 1 3.4E-05 39.6 1.4 16 94-109 4-19 (250)
219 2wf7_A Beta-PGM, beta-phosphog 74.6 0.79 2.7E-05 39.5 0.7 15 95-109 4-18 (221)
220 2fdr_A Conserved hypothetical 74.3 1 3.5E-05 39.2 1.3 16 94-109 5-20 (229)
221 3mc1_A Predicted phosphatase, 74.2 0.97 3.3E-05 39.3 1.2 16 94-109 5-20 (226)
222 1te2_A Putative phosphatase; s 74.2 0.96 3.3E-05 39.0 1.2 16 94-109 10-25 (226)
223 2pib_A Phosphorylated carbohyd 73.8 1.1 3.7E-05 38.3 1.3 15 95-109 3-17 (216)
224 3nas_A Beta-PGM, beta-phosphog 73.5 0.95 3.2E-05 39.6 0.9 16 94-109 3-18 (233)
225 3ddh_A Putative haloacid dehal 73.3 1.2 3.9E-05 38.6 1.4 16 94-109 9-24 (234)
226 2gfh_A Haloacid dehalogenase-l 72.9 1.1 3.7E-05 40.9 1.2 18 92-109 17-34 (260)
227 2om6_A Probable phosphoserine 72.9 0.99 3.4E-05 39.2 0.9 16 94-109 5-20 (235)
228 3umc_A Haloacid dehalogenase; 72.8 1.1 3.9E-05 39.6 1.3 17 93-109 22-38 (254)
229 2hoq_A Putative HAD-hydrolase 72.6 1 3.5E-05 40.0 0.9 15 95-109 4-18 (241)
230 4gxt_A A conserved functionall 71.9 3.3 0.00011 40.8 4.5 40 153-192 220-260 (385)
231 2nyv_A Pgpase, PGP, phosphogly 71.6 1.3 4.5E-05 38.9 1.4 15 95-109 5-19 (222)
232 3l5k_A Protein GS1, haloacid d 71.5 1.3 4.4E-05 39.5 1.3 18 92-109 29-46 (250)
233 1swv_A Phosphonoacetaldehyde h 71.3 1.2 4.2E-05 40.0 1.2 16 94-109 7-22 (267)
234 4g9b_A Beta-PGM, beta-phosphog 71.1 1.3 4.3E-05 39.9 1.2 16 94-109 6-21 (243)
235 3smv_A S-(-)-azetidine-2-carbo 71.0 1.2 4E-05 38.8 0.9 16 94-109 7-22 (240)
236 2qlt_A (DL)-glycerol-3-phospha 70.9 1.4 4.7E-05 40.4 1.4 16 94-109 36-51 (275)
237 3sd7_A Putative phosphatase; s 70.5 1.5 5.2E-05 38.6 1.6 16 94-109 30-45 (240)
238 4eek_A Beta-phosphoglucomutase 70.4 1.6 5.6E-05 39.0 1.8 18 92-109 27-44 (259)
239 3vay_A HAD-superfamily hydrola 70.2 1.3 4.5E-05 38.5 1.1 16 94-109 3-18 (230)
240 3u26_A PF00702 domain protein; 69.8 1.3 4.5E-05 38.6 1.0 15 94-108 3-17 (234)
241 3umg_A Haloacid dehalogenase; 69.3 1.4 4.6E-05 38.9 1.0 17 93-109 15-31 (254)
242 3qnm_A Haloacid dehalogenase-l 69.0 1.4 4.9E-05 38.3 1.1 17 93-109 5-21 (240)
243 2fea_A 2-hydroxy-3-keto-5-meth 68.4 1.8 6E-05 38.6 1.5 16 93-108 6-21 (236)
244 1qq5_A Protein (L-2-haloacid d 68.3 1.5 5E-05 39.3 1.0 15 95-109 4-18 (253)
245 1y8a_A Hypothetical protein AF 66.5 1.9 6.4E-05 41.0 1.4 22 86-107 14-35 (332)
246 2g80_A Protein UTR4; YEL038W, 65.6 1.8 6.1E-05 39.8 1.0 16 94-109 32-47 (253)
247 3k1z_A Haloacid dehalogenase-l 64.8 2.3 7.8E-05 38.5 1.6 15 95-109 3-17 (263)
248 1rku_A Homoserine kinase; phos 63.5 2.4 8.1E-05 36.5 1.3 12 95-106 4-15 (206)
249 1yns_A E-1 enzyme; hydrolase f 62.0 2.2 7.6E-05 39.0 0.9 16 93-108 10-25 (261)
250 3a1c_A Probable copper-exporti 56.6 3.8 0.00013 37.9 1.6 15 95-109 34-48 (287)
251 3t7k_A RTT107, regulator of TY 54.8 20 0.00068 33.2 5.9 82 308-389 129-240 (256)
252 2jc9_A Cytosolic purine 5'-nuc 52.8 15 0.0005 37.9 5.2 41 150-191 242-284 (555)
253 3ipz_A Monothiol glutaredoxin- 39.1 24 0.00081 27.6 3.5 42 156-197 4-50 (109)
254 4as2_A Phosphorylcholine phosp 39.0 18 0.00062 34.5 3.2 51 154-205 143-200 (327)
255 2ho4_A Haloacid dehalogenase-l 38.9 1.7 5.7E-05 38.8 -4.0 76 155-232 123-206 (259)
256 3i28_A Epoxide hydrolase 2; ar 35.1 12 0.00042 36.5 1.4 37 155-191 132-174 (555)
257 4as2_A Phosphorylcholine phosp 29.4 18 0.00063 34.5 1.5 18 91-108 23-40 (327)
258 2wem_A Glutaredoxin-related pr 27.0 34 0.0012 27.4 2.5 38 158-195 8-50 (118)
259 2k2w_A Recombination and DNA r 26.7 59 0.002 26.4 3.8 34 310-345 9-42 (118)
260 3can_A Pyruvate-formate lyase- 21.3 83 0.0028 26.3 4.1 35 155-189 16-54 (182)
261 3v2d_5 50S ribosomal protein L 21.0 45 0.0015 23.7 1.8 27 25-54 26-52 (60)
262 4g63_A Cytosolic IMP-GMP speci 21.0 97 0.0033 31.2 5.0 54 149-203 181-243 (470)
263 3rhb_A ATGRXC5, glutaredoxin-C 20.4 67 0.0023 24.6 3.0 41 157-197 6-46 (113)
264 1yv9_A Hydrolase, haloacid deh 20.1 1E+02 0.0034 27.1 4.5 75 155-232 127-210 (264)
265 3gx8_A Monothiol glutaredoxin- 20.0 64 0.0022 25.7 2.8 38 157-194 3-45 (121)
No 1
>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.6e-72 Score=566.78 Aligned_cols=319 Identities=26% Similarity=0.442 Sum_probs=270.2
Q ss_pred CCcccCHHHHHHHhhhcchhhhccCceEEEEeCCCceeeeeccCCCCchHHHHH--H-HHHhhcccccccCCCCCceeEE
Q 039039 68 KGLRYSIDEISRLKKRNTKNLLRMRKLHLVLDLDHTLLHSRWIGKLTSDEKYLE--K-AAAAAGEFSSDKISRGNDLFKI 144 (398)
Q Consensus 68 ~~l~vs~~~a~~~~~~~~~~ll~~~Kl~LVLDLD~TLihs~~~~~~~~~e~~~~--~-~~~~~~~F~~~~~p~~~~~f~~ 144 (398)
+||+||.+||++++++..+||+..|||+||||||+|||||+..+ ...++... + ..+++. +...|.+
T Consensus 1 ~~l~vs~~~a~~~~~~~~~rll~~~Kl~LVLDLDeTLiHs~~~~--~~~~~~~~~~~~~~~~~~---------dv~~F~l 69 (442)
T 3ef1_A 1 SDLTVSLEEASRLESENVKRLRQEKRLSLIVXLDQTIIHATVDP--TVGEWMSDPGNVNYDVLR---------DVRSFNL 69 (442)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHTTCEEEEECCBTTTEEEECCT--HHHHHHTCTTSTTTGGGT---------TCEEEEE
T ss_pred CCceecHHHHHHHHHHHHHHHHhcCCeEEEEeeccceecccccc--ccchhccCCCCcchhhhc---------cccceee
Confidence 58999999999999999999999999999999999999999642 11111000 0 001111 1123444
Q ss_pred ee----ccceEEEEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccc-c
Q 039039 145 KI----GDNVLLVKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLV-L 219 (398)
Q Consensus 145 ~~----~~~~~~vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l-~ 219 (398)
.. ..++|||++|||+++||++++++|||+|||||++.||++|++.|||.+.||++|+|||++|+..++|||+++ +
T Consensus 70 ~~~~~~~~~~~~V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~~~~KdL~~ll~ 149 (442)
T 3ef1_A 70 QEGPSGYTSCYYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSLAQKSLRRLFP 149 (442)
T ss_dssp EETTTTEEEEEEEEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSCSSCCCGGGTCS
T ss_pred eeccCCceeEEEEEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCCceeeehHHhcC
Confidence 32 246899999999999999999999999999999999999999999999999999999999998899999977 6
Q ss_pred CCCCcEEEEeCCcccccCCCCceEEeCccccccCCCCCCCc------------cc-c-----cc-------------c--
Q 039039 220 GQESSIVIVDDTESVWGGRVENLITVGSYDFFKGKKKNDCK------------SY-S-----EQ-------------M-- 266 (398)
Q Consensus 220 ~~~~~vvIiDD~~~vw~~~~~N~I~I~~y~ff~~~~~~~~~------------sl-~-----~~-------------~-- 266 (398)
+++++||||||++++|..|+ |+|+|.||+||.++||.|.. .+ . .. .
T Consensus 150 rdl~~vvIIDd~p~~~~~~p-N~I~I~~~~fF~~~gD~n~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (442)
T 3ef1_A 150 CDTSMVVVIDDRGDVWDWNP-NLIKVVPYEFFVGIGDINSNFLAKSTPLPEQEQLIPLEIPKDEPDSVDEINEENEETPE 228 (442)
T ss_dssp SCCTTEEEEESCSGGGTTCT-TEEECCCCCCSTTCCCSCC----------------------------------------
T ss_pred CCcceEEEEECCHHHhCCCC-CEEEcCCccccCCCCcccccccccccccccccccccccccccccccccccccccccCcc
Confidence 79999999999999999985 99999999999999884321 11 0 00 0
Q ss_pred ------------------------------------------------------------cC----------CCcchHHH
Q 039039 267 ------------------------------------------------------------SD----------ESESDGAL 276 (398)
Q Consensus 267 ------------------------------------------------------------~d----------~~~~D~~L 276 (398)
.| ..++|++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~rpl~~~q~~l~~~~~~~~~~~~~l~d~D~~L 308 (442)
T 3ef1_A 229 YDSSNSSYAQDSSTIPEKTLLKDTFLQNREALEEQNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHTLLHNRDHEL 308 (442)
T ss_dssp ------------------------------CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHTSCCSCHHHHCSCCCCCCHH
T ss_pred cccccccccccccccchhhhhccccCccchhhHHHHHHhhhhhhhhhccCchhhHHHHhhhhhhccccccccccCCcHHH
Confidence 00 02468999
Q ss_pred HHHHHHHHHHHhhhcCCCCCC------CCCCcchhhhhhhheecccceeEEecCCCCCC----chhhHHHHHHhCCEEee
Q 039039 277 ANILRALKAVHALYFDNPGNH------AAGRDVRSCLAKIRSRILMGCTILFGDDDFEE----LPLTWSRAEEMGAICTL 346 (398)
Q Consensus 277 ~~l~~~L~~ih~~ff~~~~~~------~~~~DVr~il~~~r~~vl~g~~i~fSg~~~~~----~~~l~~la~~lGa~~~~ 346 (398)
..|.++|++||++||+.+++. ...+||+.||+++|+++|+||+|||||++|.. +..++.+++++||+|+.
T Consensus 309 ~~l~~~L~~iH~~fy~~~d~~~~~~~~~~~~Dv~~il~~~k~~~L~G~~IvfSG~~p~~~~~~r~~l~~~~~~lGa~~~~ 388 (442)
T 3ef1_A 309 ERLEKVLKDIHAVYYEEENDISSRSGNHKHANVGLIIPKMKQKVLKGCRLLFSGVIPLGVDVLSSDIAKWAMSFGAEVVL 388 (442)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSCCSSSCCCCHHHHHHHHHHTTSTTCEEEEESSSCTTSCSTTSHHHHHHHTTTCEECS
T ss_pred HHHHHHHHHHHHHHHHHhhhcccccccCCCCcHHHHHHHHhhcccCCcEEEEecccCCCCCccHHHHHHHHHHcCCEEeC
Confidence 999999999999999986542 23589999999999999999999999999885 35999999999999999
Q ss_pred ecCCCccEEEECCCCCHHHHHHHhC-CCeeeChhHHHHHHHhcCcCCCCCCCC
Q 039039 347 VTDASITHVVSSNTQSETFEWAEQE-NKCLVHPQWINDAYFLWCRQPNDVSFF 398 (398)
Q Consensus 347 ~~~~~vTHlVa~~~~t~K~~~A~~~-gi~IV~~~WL~~c~~~~~r~~E~~Y~~ 398 (398)
+++++||||||.+.+|.|+++|+++ ||+||+++||++|+..|+++||++|+|
T Consensus 389 ~vs~~vTHLVa~~~~t~K~~~A~~~g~IkIVs~~WL~dcl~~~krldE~~YlL 441 (442)
T 3ef1_A 389 DFSVPPTHLIAAKIRTEKVKKAVSMGNIKVVKLNWLTESLSQWKRLPESDYLL 441 (442)
T ss_dssp SSSSCCSEEEECSCCCHHHHHHHHHSSSEEEEHHHHHHHHHHTSCCCGGGTBC
T ss_pred CCCCCceEEEeCCCCCHHHHHHHhcCCCEEEeHHHHHHHHHcCCcCChhcccc
Confidence 9999999999999999999999998 599999999999999999999999986
No 2
>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.1e-68 Score=530.73 Aligned_cols=310 Identities=27% Similarity=0.444 Sum_probs=259.0
Q ss_pred HHHHhhhcchhhhccCceEEEEeCCCceeeeeccCCCCchHHHHH--H-HHHhhcccccccCCCCCceeEEee----ccc
Q 039039 77 ISRLKKRNTKNLLRMRKLHLVLDLDHTLLHSRWIGKLTSDEKYLE--K-AAAAAGEFSSDKISRGNDLFKIKI----GDN 149 (398)
Q Consensus 77 a~~~~~~~~~~ll~~~Kl~LVLDLD~TLihs~~~~~~~~~e~~~~--~-~~~~~~~F~~~~~p~~~~~f~~~~----~~~ 149 (398)
.+++++.+.+||+..+|++||||||||||||+..+ ...++.-. + ..+... ....|.+.. ..+
T Consensus 2 ~~~~~~~~~~rl~~~~k~~LVlDLD~TLvhS~~~~--~~~~w~~~~~~~~~~~~~---------dv~~f~~~~~~~~~~~ 70 (372)
T 3ef0_A 2 LSRLESENVKRLRQEKRLSLIVDLDQTIIHATVDP--TVGEWMSDPGNVNYDVLR---------DVRSFNLQEGPSGYTS 70 (372)
T ss_dssp --CHHHHHHHHHHHHTCEEEEECCBTTTEEEECCT--HHHHHHTCTTSTTTGGGT---------TCEEEEEEETTTTEEE
T ss_pred hhhhhhHHHHHHHhCCCCEEEEcCCCCcccccCcC--ccchhhccCCCCchhhhh---------hhhceeeeeccCCceE
Confidence 36788999999999999999999999999998532 11111100 0 000000 011233331 246
Q ss_pred eEEEEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccc-cCCCCcEEEE
Q 039039 150 VLLVKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLV-LGQESSIVIV 228 (398)
Q Consensus 150 ~~~vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l-~~~~~~vvIi 228 (398)
.+||++|||+++||++++++|||+|||++++.||++|++.|||.+.||++|++||++|+..+.|||++| ++++++||||
T Consensus 71 ~~~v~~RPg~~eFL~~l~~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~~~~KdL~~L~~~dl~~viii 150 (372)
T 3ef0_A 71 CYYIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSLAQKSLRRLFPCDTSMVVVI 150 (372)
T ss_dssp EEEEEECTTHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSCSSCCCGGGTCSSCCTTEEEE
T ss_pred EEEEEECcCHHHHHHHHhcCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCCcceecHHHhcCCCCceEEEE
Confidence 899999999999999999999999999999999999999999999999999999999998899999987 7899999999
Q ss_pred eCCcccccCCCCceEEeCccccccCCCCCCCcccccc-------c------------------------cC---------
Q 039039 229 DDTESVWGGRVENLITVGSYDFFKGKKKNDCKSYSEQ-------M------------------------SD--------- 268 (398)
Q Consensus 229 DD~~~vw~~~~~N~I~I~~y~ff~~~~~~~~~sl~~~-------~------------------------~d--------- 268 (398)
||++++|..|+ |+|+|.||+||+++||.|+..++.. . .|
T Consensus 151 Dd~~~~~~~~p-N~I~i~~~~~f~~~~d~n~~~lp~~~~~~~~~~~~~~~~~~~q~~~~p~~~~q~~l~~~e~~~~~~~~ 229 (372)
T 3ef0_A 151 DDRGDVWDWNP-NLIKVVPYEFFVGIGDINSNFLSGNREALEEQNKERVTALELQKSERPLAKQQNALLEDEGKPTPSHT 229 (372)
T ss_dssp ESCSGGGTTCT-TEEECCCCCCSTTCCCTTC--------CCGGGGHHHHHHHHHHHHHCHHHHHHHHHHHSCCSCSGGGC
T ss_pred eCCHHHcCCCC-cEeeeCCccccCCcCccccccccccchhHHHhhhhhhhhhhhhhcccchhHHHHhhhccccccchhhc
Confidence 99999999986 9999999999999999664332210 0 01
Q ss_pred -CCcchHHHHHHHHHHHHHHhhhcCCCCC------CCCCCcchhhhhhhheecccceeEEecCCCCCC----chhhHHHH
Q 039039 269 -ESESDGALANILRALKAVHALYFDNPGN------HAAGRDVRSCLAKIRSRILMGCTILFGDDDFEE----LPLTWSRA 337 (398)
Q Consensus 269 -~~~~D~~L~~l~~~L~~ih~~ff~~~~~------~~~~~DVr~il~~~r~~vl~g~~i~fSg~~~~~----~~~l~~la 337 (398)
..++|++|..++++|++||++||+++++ ....+||+.+|+++|+++|+||+|||||++|.. +..+++++
T Consensus 230 ~~~d~D~~L~~~~~~L~~iH~~Ff~~~~~~~~~~~~~~~~dv~~ii~~lk~~~L~G~~ivfSG~~~~~~~~~~~~l~~l~ 309 (372)
T 3ef0_A 230 LLHNRDHELERLEKVLKDIHAVYYEEENDISSRSGNHKHANVGLIIPKMKQKVLKGCRLLFSGVIPLGVDVLSSDIAKWA 309 (372)
T ss_dssp SCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHTTTSTTCEEEEESSSCTTSCTTTSHHHHHH
T ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHhhhcCCcEEEEecccCCCcchhHHHHHHHH
Confidence 1257999999999999999999998432 234689999999999999999999999999863 35999999
Q ss_pred HHhCCEEeeecCCCccEEEECCCCCHHHHHHHhC-CCeeeChhHHHHHHHhcCcCCCCCCCC
Q 039039 338 EEMGAICTLVTDASITHVVSSNTQSETFEWAEQE-NKCLVHPQWINDAYFLWCRQPNDVSFF 398 (398)
Q Consensus 338 ~~lGa~~~~~~~~~vTHlVa~~~~t~K~~~A~~~-gi~IV~~~WL~~c~~~~~r~~E~~Y~~ 398 (398)
+++||+|+.+++++||||||.+.+|.|+++|++. ||+||+|+||++|+..|+++||++|+|
T Consensus 310 ~~lGa~v~~~vs~~vTHLVa~~~~t~K~~~A~~~~~I~IV~~~Wl~~c~~~~~~vdE~~Y~l 371 (372)
T 3ef0_A 310 MSFGAEVVLDFSVPPTHLIAAKIRTEKVKKAVSMGNIKVVKLNWLTESLSQWKRLPESDYLL 371 (372)
T ss_dssp HHTTCEEESSSSSCCSEEEECSCCCHHHHHHHHSSSCCEEEHHHHHHHHHTTSCCCGGGGBC
T ss_pred HHcCCEEeCcCCCCceEEEEcCCCchHHHHHHhcCCCEEEcHHHHHHHHHhCCcCChhhcee
Confidence 9999999999999999999999999999999998 799999999999999999999999976
No 3
>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}
Probab=100.00 E-value=3.6e-37 Score=283.64 Aligned_cols=157 Identities=24% Similarity=0.349 Sum_probs=139.7
Q ss_pred ccCceEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEEeCccHHHHHHHhhcc
Q 039039 90 RMRKLHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEASRL 169 (398)
Q Consensus 90 ~~~Kl~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vklRPgl~eFL~~~s~~ 169 (398)
.++|++||||||+||||+++.+ ...+++++|||+++||++++++
T Consensus 31 ~~~~~tLVLDLDeTLvh~~~~~------------------------------------~~~~~v~~RPgl~eFL~~l~~~ 74 (204)
T 3qle_A 31 YQRPLTLVITLEDFLVHSEWSQ------------------------------------KHGWRTAKRPGADYFLGYLSQY 74 (204)
T ss_dssp -CCSEEEEEECBTTTEEEEEET------------------------------------TTEEEEEECTTHHHHHHHHTTT
T ss_pred cCCCeEEEEeccccEEeeeccc------------------------------------cCceeEEeCCCHHHHHHHHHhC
Confidence 4789999999999999998631 1267899999999999999999
Q ss_pred ccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC---ccccccccccCCCCcEEEEeCCcccccCCCCceEEeC
Q 039039 170 FEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ---KERKCLDLVLGQESSIVIVDDTESVWGGRVENLITVG 246 (398)
Q Consensus 170 yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~---~~~K~L~~l~~~~~~vvIiDD~~~vw~~~~~N~I~I~ 246 (398)
|||+|||+|++.||++|++.|||.+.+|.+|++ |++|.. .++|||+++++++++||||||++.+|..|++|+|+|.
T Consensus 75 yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~-R~~c~~~~g~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~I~ 153 (204)
T 3qle_A 75 YEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLF-KEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIPME 153 (204)
T ss_dssp EEEEEECSSCHHHHHHHHHHTSTTCSSEEEEEC-GGGSEEETTEEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEE-ecceeEECCeeeecHHHhCCChHHEEEEECCHHHHhhCccCceEee
Confidence 999999999999999999999999889988765 999964 5799999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCccccccccCCCcchHHHHHHHHHHHHHHhhhcCCCCCCCCCCcchhhhhhhhe
Q 039039 247 SYDFFKGKKKNDCKSYSEQMSDESESDGALANILRALKAVHALYFDNPGNHAAGRDVRSCLAKIRS 312 (398)
Q Consensus 247 ~y~ff~~~~~~~~~sl~~~~~d~~~~D~~L~~l~~~L~~ih~~ff~~~~~~~~~~DVr~il~~~r~ 312 (398)
||. ++.|++|..|+++|+.|+. ....|||++|++++.
T Consensus 154 ~~~--------------------~~~D~eL~~L~~~L~~L~~---------~~~~DVR~~L~~~~~ 190 (204)
T 3qle_A 154 PWN--------------------GEADDKLVRLIPFLEYLAT---------QQTKDVRPILNSFED 190 (204)
T ss_dssp CCC--------------------SSCCCHHHHHHHHHHHHHH---------TCCSCSHHHHTTSSC
T ss_pred eEC--------------------CCCChhHHHHHHHHHHHhh---------cChHHHHHHHHHhcC
Confidence 997 2346699999999999985 236899999998875
No 4
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=100.00 E-value=4.7e-34 Score=258.62 Aligned_cols=166 Identities=26% Similarity=0.333 Sum_probs=141.6
Q ss_pred hccCceEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeecc--ceEEEEeCccHHHHHHHh
Q 039039 89 LRMRKLHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGD--NVLLVKLRPFVRSFLEEA 166 (398)
Q Consensus 89 l~~~Kl~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~--~~~~vklRPgl~eFL~~~ 166 (398)
...+|++||||||||||||++.+... ....+.+...+ ..+++++|||+++||+++
T Consensus 11 ~~~~k~~LVLDLD~TLvhs~~~~~~~-----------------------~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l 67 (181)
T 2ght_A 11 QDSDKICVVINLDETLVHSSFKPVNN-----------------------ADFIIPVEIDGVVHQVYVLKRPHVDEFLQRM 67 (181)
T ss_dssp GGTTSCEEEECCBTTTEEEESSCCSS-----------------------CSEEEEEEETTEEEEEEEEECTTHHHHHHHH
T ss_pred ccCCCeEEEECCCCCeECCcccCCCC-----------------------ccceeeeeeCCeeEEEEEEeCCCHHHHHHHH
Confidence 45789999999999999998642110 11223333322 468999999999999999
Q ss_pred hccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC---ccccccccccCCCCcEEEEeCCcccccCCCCceE
Q 039039 167 SRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ---KERKCLDLVLGQESSIVIVDDTESVWGGRVENLI 243 (398)
Q Consensus 167 s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~---~~~K~L~~l~~~~~~vvIiDD~~~vw~~~~~N~I 243 (398)
++.|||+|||++.+.||+++++.|||.+ +|..++ +|++|.. .+.|+|++++.+++++|||||++..|..+++|+|
T Consensus 68 ~~~~~i~I~T~~~~~~a~~vl~~ld~~~-~f~~~~-~rd~~~~~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi 145 (181)
T 2ght_A 68 GELFECVLFTASLAKYADPVADLLDKWG-AFRARL-FRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAV 145 (181)
T ss_dssp HHHSEEEEECSSCHHHHHHHHHHHCTTC-CEEEEE-CGGGSEEETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBC
T ss_pred HhCCCEEEEcCCCHHHHHHHHHHHCCCC-cEEEEE-eccCceecCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEe
Confidence 9999999999999999999999999997 897765 4999863 5899999999999999999999999999999999
Q ss_pred EeCccccccCCCCCCCccccccccCCCcchHHHHHHHHHHHHHHhhhcCCCCCCCCCCcchhhhhh
Q 039039 244 TVGSYDFFKGKKKNDCKSYSEQMSDESESDGALANILRALKAVHALYFDNPGNHAAGRDVRSCLAK 309 (398)
Q Consensus 244 ~I~~y~ff~~~~~~~~~sl~~~~~d~~~~D~~L~~l~~~L~~ih~~ff~~~~~~~~~~DVr~il~~ 309 (398)
+|.+|. ++.+|++|..++++|+.|+. ..|||++|++
T Consensus 146 ~i~~~~-------------------~~~~D~eL~~l~~~L~~l~~-----------~~DVr~~l~~ 181 (181)
T 2ght_A 146 PVASWF-------------------DNMSDTELHDLLPFFEQLSR-----------VDDVYSVLRQ 181 (181)
T ss_dssp CCCCCS-------------------SCTTCCHHHHHHHHHHHHTT-----------CSCTHHHHCC
T ss_pred Eecccc-------------------CCCChHHHHHHHHHHHHhCc-----------CccHHHHhhC
Confidence 999997 46778999999999999986 7899999864
No 5
>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}
Probab=99.97 E-value=3.1e-32 Score=266.86 Aligned_cols=157 Identities=18% Similarity=0.225 Sum_probs=135.2
Q ss_pred hccCceEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEEeCccHHHHHHHhhc
Q 039039 89 LRMRKLHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEASR 168 (398)
Q Consensus 89 l~~~Kl~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vklRPgl~eFL~~~s~ 168 (398)
.+.+|++||||||+||||+.+.. ..+++.+|||+++||+++++
T Consensus 136 ~~~~k~tLVLDLDeTLvh~~~~~-------------------------------------~~~~~~~RP~l~eFL~~l~~ 178 (320)
T 3shq_A 136 PREGKKLLVLDIDYTLFDHRSPA-------------------------------------ETGTELMRPYLHEFLTSAYE 178 (320)
T ss_dssp CCTTCEEEEECCBTTTBCSSSCC-------------------------------------SSHHHHBCTTHHHHHHHHHH
T ss_pred CcCCCcEEEEeccccEEcccccC-------------------------------------CCcceEeCCCHHHHHHHHHh
Confidence 35689999999999999997521 03467899999999999999
Q ss_pred cccEEEEcCCcHHHHHHHHHHhCCCCCc-cceeEEEccCCCC----------ccccccccc-----cCCCCcEEEEeCCc
Q 039039 169 LFEISVCTMGNREYATRAVKLLDPDCKY-FNSRIITREDFKQ----------KERKCLDLV-----LGQESSIVIVDDTE 232 (398)
Q Consensus 169 ~yEi~I~T~g~~~YA~~il~~LDP~~~~-F~~ri~srd~~~~----------~~~K~L~~l-----~~~~~~vvIiDD~~ 232 (398)
+|||+|||++++.||++|++.|||.+.+ |..|+| |++|.. .++|||+++ ++++++||||||++
T Consensus 179 ~yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp 257 (320)
T 3shq_A 179 DYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFY-LDSTAMISVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIR 257 (320)
T ss_dssp HEEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEE-ECGGGCEEEEETTTEEEEECCHHHHHHHCTTCCGGGEEEEESCG
T ss_pred CCEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEE-EcCCccccccccCCCCEEEEEhHHhhcccCCCChhHEEEEeCCh
Confidence 9999999999999999999999999865 778887 888741 479999999 67999999999999
Q ss_pred ccccCCCCceEEeCccccccCCCCCCCccccccccCCCcchHHHHHHHHHHHHHH-hhhcCCCCCCCCCCcchhhhhh
Q 039039 233 SVWGGRVENLITVGSYDFFKGKKKNDCKSYSEQMSDESESDGALANILRALKAVH-ALYFDNPGNHAAGRDVRSCLAK 309 (398)
Q Consensus 233 ~vw~~~~~N~I~I~~y~ff~~~~~~~~~sl~~~~~d~~~~D~~L~~l~~~L~~ih-~~ff~~~~~~~~~~DVr~il~~ 309 (398)
.+|..|++|+|+|.||.... . ++.+|++|..|+++|+.|+ . ..|||+++..
T Consensus 258 ~~~~~~p~NgI~I~~~~~~~-~--------------~~~~D~eL~~L~~~L~~L~~~-----------~~DVr~~~~~ 309 (320)
T 3shq_A 258 RNFLMNPKSGLKIRPFRQAH-L--------------NRGTDTELLKLSDYLRKIAHH-----------CPDFNSLNHR 309 (320)
T ss_dssp GGGTTSGGGEEECCCCCCHH-H--------------HTTTCCHHHHHHHHHHHHHHH-----------CSCGGGCCGG
T ss_pred HHhccCcCceEEeCeEcCCC-C--------------CCCccHHHHHHHHHHHHHhcc-----------CcchhHHHHH
Confidence 99999999999999997110 0 1357999999999999999 5 6899999865
No 6
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=99.97 E-value=5e-31 Score=241.54 Aligned_cols=155 Identities=26% Similarity=0.335 Sum_probs=132.6
Q ss_pred ccCceEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeec--cceEEEEeCccHHHHHHHhh
Q 039039 90 RMRKLHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIG--DNVLLVKLRPFVRSFLEEAS 167 (398)
Q Consensus 90 ~~~Kl~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~--~~~~~vklRPgl~eFL~~~s 167 (398)
..+|++||||||||||||++.+... ....+.+... ...+++++|||+++||++++
T Consensus 25 ~~~k~~LVLDLD~TLvhs~~~~~~~-----------------------~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~ 81 (195)
T 2hhl_A 25 DYGKKCVVIDLDETLVHSSFKPISN-----------------------ADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMG 81 (195)
T ss_dssp GTTCCEEEECCBTTTEEEESSCCTT-----------------------CSEEEEEEETTEEEEEEEEECTTHHHHHHHHH
T ss_pred cCCCeEEEEccccceEcccccCCCC-----------------------ccceeeeecCCceeeEEEEeCcCHHHHHHHHH
Confidence 5689999999999999998643110 0112333322 24689999999999999999
Q ss_pred ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC---ccccccccccCCCCcEEEEeCCcccccCCCCceEE
Q 039039 168 RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ---KERKCLDLVLGQESSIVIVDDTESVWGGRVENLIT 244 (398)
Q Consensus 168 ~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~---~~~K~L~~l~~~~~~vvIiDD~~~vw~~~~~N~I~ 244 (398)
+.|+|+|||++.+.||+++++.|||.+ +|..+ ++|++|.. .+.|+|++++.+++.+|||||++..|..+++|+|+
T Consensus 82 ~~~~i~I~Tss~~~~a~~vl~~ld~~~-~f~~~-l~rd~~~~~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~ 159 (195)
T 2hhl_A 82 QLFECVLFTASLAKYADPVADLLDRWG-VFRAR-LFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVP 159 (195)
T ss_dssp HHSEEEEECSSCHHHHHHHHHHHCCSS-CEEEE-ECGGGCEEETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEE
T ss_pred cCCeEEEEcCCCHHHHHHHHHHhCCcc-cEEEE-EEcccceecCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccE
Confidence 999999999999999999999999997 89765 46999864 68999999999999999999999999999999999
Q ss_pred eCccccccCCCCCCCccccccccCCCcchHHHHHHHHHHHHHHh
Q 039039 245 VGSYDFFKGKKKNDCKSYSEQMSDESESDGALANILRALKAVHA 288 (398)
Q Consensus 245 I~~y~ff~~~~~~~~~sl~~~~~d~~~~D~~L~~l~~~L~~ih~ 288 (398)
|.+|. ++.+|++|..|+++|+.|+.
T Consensus 160 i~~~~-------------------~~~~D~eL~~L~~~L~~l~~ 184 (195)
T 2hhl_A 160 VQSWF-------------------DDMTDTELLDLIPFFEGLSR 184 (195)
T ss_dssp CCCCS-------------------SCTTCCHHHHHHHHHHHHHC
T ss_pred Eeeec-------------------CCCChHHHHHHHHHHHHHHh
Confidence 99997 46789999999999999986
No 7
>3l3e_A DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, cell cycle checkpoints, acetylation, cytoplasm, cytoskeleton, DNA damage; HET: DNA; 1.26A {Homo sapiens} PDB: 3pd7_A* 3jve_A*
Probab=99.82 E-value=2.1e-20 Score=154.66 Aligned_cols=90 Identities=13% Similarity=0.147 Sum_probs=80.8
Q ss_pred hhheecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEE---CCCCCHHHHHHHhCCCeeeChhHHHHHH
Q 039039 309 KIRSRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDASITHVVS---SNTQSETFEWAEQENKCLVHPQWINDAY 385 (398)
Q Consensus 309 ~~r~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa---~~~~t~K~~~A~~~gi~IV~~~WL~~c~ 385 (398)
+...++|+||+|+|+|..+..+..++++++++||++..+++++|||||+ ....+.|+++|++.|++||+++||.+|+
T Consensus 10 ~~~~~~l~g~~i~isg~~~~~r~~l~~li~~~Gg~v~~~~s~~~THlI~~~~~~~~~~K~~~A~~~gi~IV~~~Wl~~c~ 89 (107)
T 3l3e_A 10 EEAPKPLHKVVVCVSKKLSKKQSELNGIAASLGADYRRSFDETVTHFIYQGRPNDTNREYKSVKERGVHIVSEHWLLDCA 89 (107)
T ss_dssp ----CTTTTCEEEECGGGGGGHHHHHHHHHHTTCEEESSCCTTCCEEECCCCTTCCCHHHHHHHHTTCEEECHHHHHHHH
T ss_pred ccccCCCCCeEEEEeCCChHhHHHHHHHHHHcCCEEeccccCCceEEEecCCCCCCCHHHHHHHHCCCeEecHHHHHHHH
Confidence 3467799999999999998667799999999999999999999999999 4456899999999999999999999999
Q ss_pred HhcCcCCCCCCCC
Q 039039 386 FLWCRQPNDVSFF 398 (398)
Q Consensus 386 ~~~~r~~E~~Y~~ 398 (398)
.+|+++||++|.+
T Consensus 90 ~~~~~l~e~~Y~~ 102 (107)
T 3l3e_A 90 QECKHLPESLYPH 102 (107)
T ss_dssp HHTSCCCGGGCCT
T ss_pred HhCCCCchhhCCC
Confidence 9999999999963
No 8
>3l46_A Protein ECT2; alternative splicing, guanine-nucleotide releasing factor, phosphoprotein, polymorphism, proto-oncogene, structural genomics; 1.48A {Homo sapiens}
Probab=99.81 E-value=5e-21 Score=159.55 Aligned_cols=95 Identities=16% Similarity=0.161 Sum_probs=83.9
Q ss_pred hhhhhhhheecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEECCCCCHHHHHHHhCCCeeeChhHHHH
Q 039039 304 RSCLAKIRSRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDASITHVVSSNTQSETFEWAEQENKCLVHPQWIND 383 (398)
Q Consensus 304 r~il~~~r~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t~K~~~A~~~gi~IV~~~WL~~ 383 (398)
|+-+.+.|-++|.||+|||||+.+.++..++++++++||+++.+++++|||||+.+..+.|++.|.++|++||+++||++
T Consensus 11 ~~~~~~~~~p~F~g~~Ic~sGf~~~er~~l~~~i~~~GG~~~~~l~~~cTHLV~~~~~~~K~~~A~~~~i~IVs~eWl~d 90 (112)
T 3l46_A 11 RENLYFQGVPPFQDCILSFLGFSDEEKTNMEEMTEMQGGKYLPLGDERCTHLVVEENIVKDLPFEPSKKLYVVKQEWFWG 90 (112)
T ss_dssp -------CCCTTTTCEECEESCCHHHHHHHHHHHHHTTCEECCTTCTTCSEEEECTTTBSSCSSCCCSSCEEEEHHHHHH
T ss_pred cccccccCCCccCCeEEEEeCCCHHHHHHHHHHHHHcCCEECcccCCCceEEEecCCchhhHHHHHHCCeeEecHHHHHH
Confidence 56677889999999999999987767889999999999999999999999999999988999999999999999999999
Q ss_pred HHHhcCcCCCCCCCC
Q 039039 384 AYFLWCRQPNDVSFF 398 (398)
Q Consensus 384 c~~~~~r~~E~~Y~~ 398 (398)
|+.++.++||+.|.+
T Consensus 91 si~~g~~ldE~~Y~~ 105 (112)
T 3l46_A 91 SIQMDARAGETMYLY 105 (112)
T ss_dssp HHHHTSCCCGGGSBC
T ss_pred HHHcCCccChhhcee
Confidence 999999999999975
No 9
>2cou_A ECT2 protein; BRCT domain, RHO GTPase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.79 E-value=1.3e-20 Score=156.65 Aligned_cols=91 Identities=14% Similarity=0.197 Sum_probs=85.1
Q ss_pred hhhheecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEECCCCCHHHHHHHhCCCeeeChhHHHHHHHh
Q 039039 308 AKIRSRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDASITHVVSSNTQSETFEWAEQENKCLVHPQWINDAYFL 387 (398)
Q Consensus 308 ~~~r~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t~K~~~A~~~gi~IV~~~WL~~c~~~ 387 (398)
.+.|.++|+||+|||||+....+..++++++.+||+++..+++.|||||+.+..+.|++.|.++|++||+++||++|+.+
T Consensus 6 ~~~~~~~F~g~~i~~sg~~~~~r~~l~~~i~~~GG~~~~~~~~~~THLV~~~~~~~K~~~a~~~~i~IV~~~Wl~dsi~~ 85 (109)
T 2cou_A 6 SGFKVPPFQDCILSFLGFSDEEKHSMEEMTEMQGGSYLPVGDERCTHLIVEENTVKDLPFEPSKKLFVVKQEWFWGSIQM 85 (109)
T ss_dssp CSSCCCTTTTCBEEEESSCHHHHHHHHHHHHHHTCBCCCTTCTTCSEEEECTTTCSSCSSCCCTTSEEECHHHHHHHHHT
T ss_pred ccccCCcCCCeEEEecCCCHHHHHHHHHHHHHcCCEEecccCCCccEEEEeCCccHHHHHHHHCCCeEecHHHHHHHHHc
Confidence 45788899999999999877677899999999999999999999999999998899999999999999999999999999
Q ss_pred cCcCCCCCCCC
Q 039039 388 WCRQPNDVSFF 398 (398)
Q Consensus 388 ~~r~~E~~Y~~ 398 (398)
++++||++|.+
T Consensus 86 g~~ldE~~Y~~ 96 (109)
T 2cou_A 86 DARAGETMYLY 96 (109)
T ss_dssp TSCCCGGGTBC
T ss_pred CCcCChhccCC
Confidence 99999999964
No 10
>2d8m_A DNA-repair protein XRCC1; parallel beta-sheet, DNA ligase III, poly(ADP-ribose) polymerase-1, DNA polymerase beta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=2.5e-19 Score=153.25 Aligned_cols=88 Identities=16% Similarity=0.185 Sum_probs=83.3
Q ss_pred heecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEECCCCCHHHHHHHhCCCeeeChhHHHHHHHhcCc
Q 039039 311 RSRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDASITHVVSSNTQSETFEWAEQENKCLVHPQWINDAYFLWCR 390 (398)
Q Consensus 311 r~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t~K~~~A~~~gi~IV~~~WL~~c~~~~~r 390 (398)
..++|+|++|||||+....+..++.+++.+||+|..++++.||||||....+.|+++|+++|++||+++||.+|+..|++
T Consensus 19 ~~~~f~g~~i~itG~~~~~r~~l~~~i~~~Gg~v~~~~s~~~ThLI~~~~~~~K~~~A~~~gi~IV~~~Wl~d~~~~~~~ 98 (129)
T 2d8m_A 19 LGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRR 98 (129)
T ss_dssp HTTTSTTEEEEEESCCTTHHHHHHHHHHHTTEEEESSCCTTCCEEEESSSSCHHHHHHHHHTCEEEETHHHHHHHHTTSC
T ss_pred ccccCCCeEEEEeCCCcHHHHHHHHHHHHcCCEEeCCcCCCCeEEEecCCCChHHHHHHHCCCcEecHHHHHHHHHhCCc
Confidence 45689999999999996667899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC
Q 039039 391 QPNDVSFF 398 (398)
Q Consensus 391 ~~E~~Y~~ 398 (398)
+||++|++
T Consensus 99 l~e~~Y~l 106 (129)
T 2d8m_A 99 LPSQRYLM 106 (129)
T ss_dssp CCGGGGBC
T ss_pred CChHhccc
Confidence 99999975
No 11
>3pa6_A Microcephalin; BRCT domain, cell cycle; HET: MSE; 1.50A {Homo sapiens} PDB: 3ktf_A* 2wt8_A*
Probab=99.75 E-value=2e-18 Score=142.78 Aligned_cols=90 Identities=14% Similarity=0.121 Sum_probs=80.5
Q ss_pred hhheecccceeEEecCCCCCC---c-hhhHHHHHHhCCEEeeecCCCccEEEECCCCCHHHHHHHhCCCeeeChhHHHHH
Q 039039 309 KIRSRILMGCTILFGDDDFEE---L-PLTWSRAEEMGAICTLVTDASITHVVSSNTQSETFEWAEQENKCLVHPQWINDA 384 (398)
Q Consensus 309 ~~r~~vl~g~~i~fSg~~~~~---~-~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t~K~~~A~~~gi~IV~~~WL~~c 384 (398)
+++.++|+||+++|.+....+ + ..++.+++.+||+++.++++.|||||+.+.++.|+++|+++|++||+++||++|
T Consensus 2 ~~~~p~f~g~vvyvd~~~~~g~~~~s~~l~~~l~~~GA~v~~~l~~~vTHvV~~~~~~~~~~~A~~~~i~iV~~~Wv~~C 81 (107)
T 3pa6_A 2 HMAAPILKDVVAYVEVWSSNGTENYSKTFTTQLVDMGAKVSKTFNKQVTHVIFKDGYQSTWDKAQKRGVKLVSVLWVEKC 81 (107)
T ss_dssp --CCCTTTTCEEEEEEBCTTSCCBCHHHHHHHHHHTTCEECSSCCTTCCEEEEESCCHHHHHHHHHHTCEEECHHHHHHH
T ss_pred CccccccCCEEEEEeccCCCChhhHHHHHHHHHHHcCCEEecccCCCccEEEEeCCCChHHHHHhcCCCEEECHHHHHHH
Confidence 456789999999998876432 2 488999999999999999999999999998889999999999999999999999
Q ss_pred HHhcCcCCCCCCCC
Q 039039 385 YFLWCRQPNDVSFF 398 (398)
Q Consensus 385 ~~~~~r~~E~~Y~~ 398 (398)
+..|+++||++|++
T Consensus 82 ~~~~~~vdE~~Y~i 95 (107)
T 3pa6_A 82 RTAGAHIDESLFPA 95 (107)
T ss_dssp HHHTSCCCGGGSBC
T ss_pred HHhCccCChhcccC
Confidence 99999999999964
No 12
>4id3_A DNA repair protein REV1; BRCT domain, protein binding; HET: DNA; 1.97A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=2.5e-18 Score=137.59 Aligned_cols=86 Identities=20% Similarity=0.122 Sum_probs=75.6
Q ss_pred heecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecC--CCccEEEECCCCCHHHHHHHhCCCeeeChhHHHHHHHhc
Q 039039 311 RSRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTD--ASITHVVSSNTQSETFEWAEQENKCLVHPQWINDAYFLW 388 (398)
Q Consensus 311 r~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~--~~vTHlVa~~~~t~K~~~A~~~gi~IV~~~WL~~c~~~~ 388 (398)
..++|+||+|+|+|.....+..++++++++||++..+++ +.+||||+.+..+.|...+ .|++||+|+||.+|+..+
T Consensus 4 ~~~~f~g~~~~i~g~~~~~~~~l~~~i~~~GG~~~~~~~~~~~~THlI~~~~~~~K~~~~--~~~~iV~~~Wi~dci~~~ 81 (92)
T 4id3_A 4 SSKIFKNCVIYINGYTKPGRLQLHEMIVLHGGKFLHYLSSKKTVTHIVASNLPLKKRIEF--ANYKVVSPDWIVDSVKEA 81 (92)
T ss_dssp --CTTTTCEEEECSCCSSCHHHHHHHHHHTTCEEESSCCCTTTCCEEECSCCCHHHHHHT--TTSCEECTHHHHHHHHHT
T ss_pred cccccCCEEEEEeCCCCcCHHHHHHHHHHCCCEEEEEecCCCceEEEEecCCCHHHHHHc--CCCCEEcccHHHHHHHcC
Confidence 457899999999996555677999999999999999999 8999999999887775433 789999999999999999
Q ss_pred CcCCCCCCCC
Q 039039 389 CRQPNDVSFF 398 (398)
Q Consensus 389 ~r~~E~~Y~~ 398 (398)
+++||++|+|
T Consensus 82 ~~l~e~~Y~l 91 (92)
T 4id3_A 82 RLLPWQNYSL 91 (92)
T ss_dssp SCCCGGGGBC
T ss_pred CcCChhhccc
Confidence 9999999986
No 13
>2ebw_A DNA repair protein REV1; A/B/A 3 layers, parallel beta-sheet, DNA replication, translession synthesis, TLS, DNA polymerase zeta, PCNA; HET: DNA; NMR {Homo sapiens}
Probab=99.70 E-value=2e-17 Score=134.09 Aligned_cols=86 Identities=13% Similarity=0.104 Sum_probs=78.0
Q ss_pred heecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecC-CCccEEEECCCCCHHHHHHHhCCCeeeChhHHHHHHHhcC
Q 039039 311 RSRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTD-ASITHVVSSNTQSETFEWAEQENKCLVHPQWINDAYFLWC 389 (398)
Q Consensus 311 r~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~-~~vTHlVa~~~~t~K~~~A~~~gi~IV~~~WL~~c~~~~~ 389 (398)
..++|+|++|+++|.....+..|.++++++||++..+++ +.+||+|+.+..+.|++.|+ +++||+|+||.+|+..++
T Consensus 9 ~~~lF~g~~~~isg~~~~~~~~L~~~i~~~GG~~~~~~~~~~~THlI~~~~~~~k~~~~~--~~~iV~p~Wl~dci~~~~ 86 (97)
T 2ebw_A 9 SSTIFSGVAIYVNGYTDPSAEELRKLMMLHGGQYHVYYSRSKTTHIIATNLPNAKIKELK--GEKVIRPEWIVESIKAGR 86 (97)
T ss_dssp CCCTTTTCEEEECSSCSSCHHHHHHHHHHTTCEECSSCCSSSCCEEECSCCCTTHHHHTS--SSCCBCTHHHHHHHHHTS
T ss_pred CCCCCCCeEEEEeCCCcccHHHHHHHHHHcCCEEeeecCCCCCEEEEecCCChHHHHHhc--CCCEeChHHHHHHHHcCC
Confidence 457899999999998766677999999999999998777 68999999998889987765 899999999999999999
Q ss_pred cCCCCCCCC
Q 039039 390 RQPNDVSFF 398 (398)
Q Consensus 390 r~~E~~Y~~ 398 (398)
++||++|.|
T Consensus 87 ~l~~~~Y~l 95 (97)
T 2ebw_A 87 LLSYIPYQL 95 (97)
T ss_dssp CCCSGGGBS
T ss_pred ccCchHcEe
Confidence 999999975
No 14
>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*
Probab=99.66 E-value=1e-16 Score=155.66 Aligned_cols=92 Identities=16% Similarity=0.148 Sum_probs=86.6
Q ss_pred hhhhheecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecC-CCccEEEECCCCCHHHHHHHhCCCeeeChhHHHHHH
Q 039039 307 LAKIRSRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTD-ASITHVVSSNTQSETFEWAEQENKCLVHPQWINDAY 385 (398)
Q Consensus 307 l~~~r~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~-~~vTHlVa~~~~t~K~~~A~~~gi~IV~~~WL~~c~ 385 (398)
....+..+|+|++|+|||+.+..+..++.+++.+||+++.+++ +.+||||+.+..+.|+.+|+++|++||+++||.+|+
T Consensus 192 ~~~~~~~~f~g~~i~~tG~~~~~r~~l~~li~~~GG~~~~~ls~~~~THLI~~~~~g~K~~~A~~~gi~IV~~~Wl~dsi 271 (298)
T 3olc_X 192 MEDFKCPIFLGCIICVTGLCGLDRKEVQQLTVKHGGQYMGQLKMNECTHLIVQEPKGQKYECAKRWNVHCVTTQWFFDSI 271 (298)
T ss_dssp GGGGBCCTTTTCEEEECSCCHHHHHHHHHHHHHTTCEECSSCCTTTCCEEECSSSCSHHHHHHHHTTCEEECHHHHHHHH
T ss_pred cccccccccCCeEEEEeCCCCccHHHHHHHHHHcCCEEeceecCCCceEEEEeCCCchHHHHHHHCCCeEEeHHHHHHHH
Confidence 4567889999999999998877778999999999999999999 899999999999999999999999999999999999
Q ss_pred HhcCcCCCCCCCC
Q 039039 386 FLWCRQPNDVSFF 398 (398)
Q Consensus 386 ~~~~r~~E~~Y~~ 398 (398)
.+|+++||++|.+
T Consensus 272 ~~g~~lde~~Y~l 284 (298)
T 3olc_X 272 EKGFCQDESIYKT 284 (298)
T ss_dssp HHTSCCCGGGSBS
T ss_pred HCCCCCCchhcCC
Confidence 9999999999975
No 15
>1wf6_A Similar to S.pombe -RAD4+/CUT5+product (A40727); BRCT, topoisomerase II binding protein, checkpoint; NMR {Homo sapiens} SCOP: c.15.1.5
Probab=99.63 E-value=4e-16 Score=133.78 Aligned_cols=97 Identities=11% Similarity=0.152 Sum_probs=81.8
Q ss_pred CcchhhhhhhheecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEECCCCCHHHHHHHh---CCCeeeC
Q 039039 301 RDVRSCLAKIRSRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDASITHVVSSNTQSETFEWAEQ---ENKCLVH 377 (398)
Q Consensus 301 ~DVr~il~~~r~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t~K~~~A~~---~gi~IV~ 377 (398)
.++...+++.+..+|+||+|+|+|+....+..++.+++.+||++..++++.|||||+.+. +.+++.+.+ .+++||+
T Consensus 27 ~~~d~~~~~~~~~lF~g~~i~i~G~~~~~~~~L~~~i~~~Gg~v~~~l~~~vTHvI~~~~-~~~~~~~~~~~~~~~~iV~ 105 (132)
T 1wf6_A 27 ENLDVSAFQAPEDLLDGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDY-DDELKQFWNKSAHRPHVVG 105 (132)
T ss_dssp TTCCGGGCCCCTTTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEESSCCSSCCEEEESSC-CSHHHHHHHHSCCCCCEEE
T ss_pred hhcCcccccccccccCCEEEEEECCChHHHHHHHHHHHHCCCEEeCcCCCCCeEEEECCc-hHHHHHHHHhhCCCCeEec
Confidence 445566778888999999999999855456689999999999999999999999999864 445554443 4789999
Q ss_pred hhHHHHHHHhcCcCCCCCCCC
Q 039039 378 PQWINDAYFLWCRQPNDVSFF 398 (398)
Q Consensus 378 ~~WL~~c~~~~~r~~E~~Y~~ 398 (398)
|+||++|+..++++||++|+.
T Consensus 106 ~~Wv~dsi~~~~ll~e~~Y~~ 126 (132)
T 1wf6_A 106 AKWLLECFSKGYMLSEEPYIH 126 (132)
T ss_dssp HHHHHHHHHHSSCCCSGGGBC
T ss_pred hHHHHHHHHcCCcCCHhhccC
Confidence 999999999999999999963
No 16
>3pc6_A DNA repair protein XRCC1; BRCT domain, protein:protein interactions, DNA L III-alpha BRCT2 domain, DNA binding protein; HET: DNA; 1.90A {Mus musculus} SCOP: c.15.1.1 PDB: 3pc8_A* 3qvg_B* 1cdz_A
Probab=99.59 E-value=2.7e-15 Score=123.13 Aligned_cols=86 Identities=14% Similarity=0.101 Sum_probs=78.9
Q ss_pred ecccceeEEecCCCCC-CchhhHHHHHHhCCEEeeecCCCccEEEECCCCCHHHHHHHhC--CCeeeChhHHHHHHHhcC
Q 039039 313 RILMGCTILFGDDDFE-ELPLTWSRAEEMGAICTLVTDASITHVVSSNTQSETFEWAEQE--NKCLVHPQWINDAYFLWC 389 (398)
Q Consensus 313 ~vl~g~~i~fSg~~~~-~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t~K~~~A~~~--gi~IV~~~WL~~c~~~~~ 389 (398)
.+|+|++++|+|.+|. ++..+++++.++||++....+++|||+|+.+..+.|+..|++. ++++|+|+||++|+.+|+
T Consensus 6 d~F~g~~f~l~~~~p~~~r~~l~ryiia~GG~v~~~~~~~vTHvIt~~~~d~~~~~a~~~~p~~~~V~P~WI~~Ci~~~k 85 (104)
T 3pc6_A 6 DFFEGKHFFLYGEFPGDERRRLIRYVTAFNGELEDYMNERVQFVITAQEWDPNFEEALMENPSLAFVRPRWIYSCNEKQK 85 (104)
T ss_dssp CTTTTCEEEEESCCSTTHHHHHHHHHHHTTCEECSSCCTTCCEEEESSCCCHHHHHHHTTCTTCEEECHHHHHHHHHHTS
T ss_pred hhhCCeEEEEcCCCcHHHHHHHHHHHHHcCCEEEcccCCCceEEEeCCCCChhHHHHhhhCCCCeEEccHHHHHHHhcCc
Confidence 4799999999999974 5668999999999999998999999999999999999988863 699999999999999999
Q ss_pred cCCCCCCCC
Q 039039 390 RQPNDVSFF 398 (398)
Q Consensus 390 r~~E~~Y~~ 398 (398)
++|+++|++
T Consensus 86 lvp~~~y~~ 94 (104)
T 3pc6_A 86 LLPHQLYGV 94 (104)
T ss_dssp CCCGGGGBC
T ss_pred cCCccccee
Confidence 999999974
No 17
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=99.58 E-value=1.3e-15 Score=141.67 Aligned_cols=88 Identities=14% Similarity=0.054 Sum_probs=80.4
Q ss_pred heecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEECCC------CCHHHHHHHhCCCeeeChhHHHHH
Q 039039 311 RSRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDASITHVVSSNT------QSETFEWAEQENKCLVHPQWINDA 384 (398)
Q Consensus 311 r~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~------~t~K~~~A~~~gi~IV~~~WL~~c 384 (398)
|...+++++|++||+.+..+..+.++++.+||.+..++++.|||||+... .|.|+..|+..|++||+++||.+|
T Consensus 1 ~~~~~~~~~i~~sg~~~~~~~~l~~~~~~~G~~~~~~~~~~~THlI~~~~~~~~~~rt~K~~~a~~~g~~IV~~~Wl~~~ 80 (229)
T 1l0b_A 1 KERAERDISMVVSGLTPKEVMIVQKFAEKYRLALTDVITEETTHVIIKTDAEFVCERTLKYFLGIAGGKWIVSYSWVIKS 80 (229)
T ss_dssp --CCCCCCEEEEESCCHHHHHHHHHHHHHTTCEECSSCCSSCCEEEECBCTTSEECCCHHHHHHHHTTCEEEETHHHHHH
T ss_pred CCCCCCCeEEEEcCCCHHHHHHHHHHHHHcCCEEeCCcCCCCCEEEEcCCccccccccHHHHHHHHCCCcEecHHHHHHH
Confidence 35678999999999988777789999999999999999999999999974 799999999999999999999999
Q ss_pred HHhcCcCCCCCCCC
Q 039039 385 YFLWCRQPNDVSFF 398 (398)
Q Consensus 385 ~~~~~r~~E~~Y~~ 398 (398)
+..++.+||++|.+
T Consensus 81 ~~~~~~~~e~~y~~ 94 (229)
T 1l0b_A 81 IQERKLLSVHEFEV 94 (229)
T ss_dssp HTTTSCCCSGGGBC
T ss_pred HHCCCcCChHHeEe
Confidence 99999999999964
No 18
>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A
Probab=99.55 E-value=4.3e-15 Score=136.70 Aligned_cols=83 Identities=11% Similarity=0.005 Sum_probs=77.8
Q ss_pred cceeEEecCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEECC---CCCHHHHHHHhCCCeeeChhHHHHHHHhcCcCC
Q 039039 316 MGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDASITHVVSSN---TQSETFEWAEQENKCLVHPQWINDAYFLWCRQP 392 (398)
Q Consensus 316 ~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~---~~t~K~~~A~~~gi~IV~~~WL~~c~~~~~r~~ 392 (398)
.|++|++||+.+..+..+.++++.+||++..++++.|||||+.. ..|.|+..|...|++||+++||.+|+..++.+|
T Consensus 1 ~~~vi~~sg~~~~~~~~l~~~~~~~G~~~~~~~~~~~THlV~~~~~~~rt~K~l~a~~~g~~IV~~~Wl~~c~~~~~~~~ 80 (210)
T 2nte_A 1 GPLVLIGSGLSSEQQKMLSELAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILNGCWILKFEWVKACLRRKVCEQ 80 (210)
T ss_dssp CCCEEEESSCCHHHHHHHHHHHHHTTCEEESSCCTTCCEEEESSSSCCCSHHHHHHHHTTCEEEETHHHHHHHHHTSCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHcCCEEeCCCCCCCeEEEEcCCCcchHHHHHHHHhcCCEEecHHHHHHHHHcCCcCC
Confidence 37899999998877779999999999999999999999999987 779999999999999999999999999999999
Q ss_pred CCCCCC
Q 039039 393 NDVSFF 398 (398)
Q Consensus 393 E~~Y~~ 398 (398)
|++|.+
T Consensus 81 e~~y~~ 86 (210)
T 2nte_A 81 EEKYEI 86 (210)
T ss_dssp GGGTBC
T ss_pred hhhccC
Confidence 999974
No 19
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=99.54 E-value=5.1e-15 Score=137.54 Aligned_cols=89 Identities=15% Similarity=0.165 Sum_probs=80.9
Q ss_pred hhheecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEECC-CCCHHHHHHHhCCCeeeChhHHHHHHHh
Q 039039 309 KIRSRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDASITHVVSSN-TQSETFEWAEQENKCLVHPQWINDAYFL 387 (398)
Q Consensus 309 ~~r~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~-~~t~K~~~A~~~gi~IV~~~WL~~c~~~ 387 (398)
.|+--++.|++|+|||+.+..+..+.++++++||.+..++ ++|||||+.+ .+|.|+..|...|++||+|+||.+|+..
T Consensus 8 ~~~~~~~~~~~i~~SG~~~~~~~~l~~~i~~lGg~v~~~~-~~~THLI~~~~~rT~K~l~A~~~g~~IVs~~Wl~~c~~~ 86 (219)
T 3sqd_A 8 HMKLTPELTPFVLFTGFEPVQVQQYIKKLYILGGEVAESA-QKCTHLIASKVTRTVKFLTAISVVKHIVTPEWLEECFRC 86 (219)
T ss_dssp -CCCCGGGCCEEEECSCCHHHHHHHHHHHHHTTCEECSSG-GGCSEEECSSCCCCHHHHHHTTTCSEEECHHHHHHHHHH
T ss_pred ccccCCCCCeEEEEeCCChHHHHHHHHHHHHCCCEEeCCC-CCceEEEECCCCCCHHHHHHHHcCCCEecHHHHHHHHHc
Confidence 3667789999999999887777789999999999999887 8999999986 4688999999999999999999999999
Q ss_pred cCcCCCCCCCC
Q 039039 388 WCRQPNDVSFF 398 (398)
Q Consensus 388 ~~r~~E~~Y~~ 398 (398)
++.+||++|++
T Consensus 87 ~~~l~e~~y~l 97 (219)
T 3sqd_A 87 QKFIDEQNYIL 97 (219)
T ss_dssp TSCCCSGGGBC
T ss_pred CCCCChHhccC
Confidence 99999999975
No 20
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=99.53 E-value=6.4e-15 Score=135.24 Aligned_cols=83 Identities=14% Similarity=0.067 Sum_probs=76.6
Q ss_pred cceeEEecCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEECCC------CCHHHHHHHhCCCeeeChhHHHHHHHhcC
Q 039039 316 MGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDASITHVVSSNT------QSETFEWAEQENKCLVHPQWINDAYFLWC 389 (398)
Q Consensus 316 ~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~------~t~K~~~A~~~gi~IV~~~WL~~c~~~~~ 389 (398)
+|++|++||+.+..+..+.++++++||++..++++.|||||+... .|.|+..|...|++||+++||.+|+..++
T Consensus 3 ~~~~~~~sg~~~~~~~~l~~~~~~~G~~~~~~~~~~~THli~~~~~~~~~~rt~k~~~a~~~g~~IV~~~Wl~~~~~~~~ 82 (214)
T 1t15_A 3 KRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKERK 82 (214)
T ss_dssp -CCEEEEESCCHHHHHHHHHHHHHHTCEECSSCCTTCCEEEECBCTTSEECCBHHHHHHHHTTCEEEETHHHHHHHHTTS
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhCCEEeCccCCCCcEEEEeCCcccchhhhHHHHHHHhcCCEEeCHHHHHHHHHCCC
Confidence 588999999987777789999999999999999999999999974 59999999999999999999999999999
Q ss_pred cCCCCCCCC
Q 039039 390 RQPNDVSFF 398 (398)
Q Consensus 390 r~~E~~Y~~ 398 (398)
.+||++|.+
T Consensus 83 ~~~e~~y~~ 91 (214)
T 1t15_A 83 MLNEHDFEV 91 (214)
T ss_dssp CCCGGGGBC
T ss_pred cCChHHeEe
Confidence 999999964
No 21
>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A
Probab=99.48 E-value=4.4e-14 Score=130.10 Aligned_cols=85 Identities=12% Similarity=0.047 Sum_probs=71.8
Q ss_pred hheecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEECCC-CCHHHHHHHhCCCeeeChhHHHHHHHhc
Q 039039 310 IRSRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDASITHVVSSNT-QSETFEWAEQENKCLVHPQWINDAYFLW 388 (398)
Q Consensus 310 ~r~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~-~t~K~~~A~~~gi~IV~~~WL~~c~~~~ 388 (398)
-+++.+++++|+|||+.+. .+.++++.+||.+..++++ +||||+.+. .|.|+..|+..|++||+++||.+|+..+
T Consensus 5 ~~~~~~~~~~v~~sG~~~~---~~~~~i~~lGg~~~~~~~~-~THlI~~~~~rt~K~l~a~~~g~~IV~~~Wl~~~~~~~ 80 (209)
T 2etx_A 5 KLNQESTAPKVLFTGVVDA---RGERAVLALGGSLAGSAAE-ASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAG 80 (209)
T ss_dssp -------CCEEEECSSCCH---HHHHHHHHTTCEECSSTTT-CSEEECSSCCCSHHHHHHHHHTCCEECTHHHHHHHHHT
T ss_pred cccccCCCcEEEEeCCCcH---HHHHHHHHCCCEEeCCCCC-ceEEEECCCCCCHHHHHHHhcCCccccHHHHHHHHHcC
Confidence 3567899999999999864 5689999999999999984 999999864 6999999999999999999999999999
Q ss_pred CcCCCCCCCC
Q 039039 389 CRQPNDVSFF 398 (398)
Q Consensus 389 ~r~~E~~Y~~ 398 (398)
+.+||++|++
T Consensus 81 ~~l~e~~y~~ 90 (209)
T 2etx_A 81 FFLPPDEYVV 90 (209)
T ss_dssp SCCCSGGGBC
T ss_pred CCCChhhccc
Confidence 9999999974
No 22
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=99.44 E-value=1.1e-13 Score=129.81 Aligned_cols=85 Identities=12% Similarity=0.095 Sum_probs=76.2
Q ss_pred cccceeEEecCCCCCCchhhHHHHHHhCCEEee--ecCCCccEEEECCC-CCHHHHHHHhCCCeeeChhHHHHHHHhcCc
Q 039039 314 ILMGCTILFGDDDFEELPLTWSRAEEMGAICTL--VTDASITHVVSSNT-QSETFEWAEQENKCLVHPQWINDAYFLWCR 390 (398)
Q Consensus 314 vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~--~~~~~vTHlVa~~~-~t~K~~~A~~~gi~IV~~~WL~~c~~~~~r 390 (398)
+-++.+++|||+.+..+..+.++++.+||++.. +++++|||||+... .|.|+..|+..|++||+++||.+|+...+.
T Consensus 6 ~~~~~~~~~Sg~~~~~~~~l~~~i~~LGg~~~~~~~~~~~~THlV~~~~~RT~K~l~aia~G~wIvs~~wl~~s~~~g~~ 85 (235)
T 3al2_A 6 LKKQYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYLASVAAGKWVLHRSYLEACRTAGHF 85 (235)
T ss_dssp --CCCEEEEESCCHHHHHHHHHHHHHTTCEECCSSSCCTTCCEEEESSCCCSHHHHHHHHTTCEEECTHHHHHHHHHTSC
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHHcCCEEeccCCCCCCCcEEEECCCCCCHHHHHHHHcCCcCccHHHHHHHHHcCCC
Confidence 347889999999876667899999999999975 58899999999985 599999999999999999999999999999
Q ss_pred CCCCCCCC
Q 039039 391 QPNDVSFF 398 (398)
Q Consensus 391 ~~E~~Y~~ 398 (398)
+||++|.+
T Consensus 86 l~E~~ye~ 93 (235)
T 3al2_A 86 VQEEDYEW 93 (235)
T ss_dssp CCSGGGBT
T ss_pred CChhceee
Confidence 99999964
No 23
>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*
Probab=99.42 E-value=1.7e-13 Score=132.92 Aligned_cols=83 Identities=17% Similarity=0.185 Sum_probs=77.2
Q ss_pred eecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEECCCCCHHHHHHHhCCCeeeChhHHHHHHHhcCcC
Q 039039 312 SRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDASITHVVSSNTQSETFEWAEQENKCLVHPQWINDAYFLWCRQ 391 (398)
Q Consensus 312 ~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t~K~~~A~~~gi~IV~~~WL~~c~~~~~r~ 391 (398)
..+|+|++||+||+.+..+..+.++++++||++..+++++|||||+...+|.|+++|.+.|++||+++||.+|+...+.+
T Consensus 103 ~~~l~g~~~~~tG~~~~~r~~l~~~i~~~GG~v~~~~t~~tTHLI~~~~~t~Ky~~A~~~gi~IV~~~Wl~~c~~~~~~~ 182 (298)
T 3olc_X 103 NMVMSDVTISCTSLEKEKREEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQEK 182 (298)
T ss_dssp CCTTTTCEEEEESCCHHHHHHHHHHHHHTTCEECSSCCTTCCEEEESSSCSHHHHHHHHTTCCEECHHHHHHHHHHHHTT
T ss_pred ccccCCeEEEeCCCcHHhHHHHHHHHHHCCCEEecCcCCCeeEEEEeCCCChHHHHHHHCCCeEeeHHHHHHHHHcCCcC
Confidence 45899999999999887777999999999999999999999999999999999999999999999999999999988776
Q ss_pred CCC
Q 039039 392 PND 394 (398)
Q Consensus 392 ~E~ 394 (398)
++.
T Consensus 183 ~~~ 185 (298)
T 3olc_X 183 KIT 185 (298)
T ss_dssp CCS
T ss_pred Ccc
Confidence 553
No 24
>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*
Probab=99.38 E-value=4e-13 Score=122.90 Aligned_cols=82 Identities=10% Similarity=0.015 Sum_probs=75.0
Q ss_pred ceeEEecCCCCCCchhhHHHHHHhCC-EEeeecCCCccEEEECC-CCCHHHHHHHhCCCeeeChhHHHHHHHhcCcCCCC
Q 039039 317 GCTILFGDDDFEELPLTWSRAEEMGA-ICTLVTDASITHVVSSN-TQSETFEWAEQENKCLVHPQWINDAYFLWCRQPND 394 (398)
Q Consensus 317 g~~i~fSg~~~~~~~~l~~la~~lGa-~~~~~~~~~vTHlVa~~-~~t~K~~~A~~~gi~IV~~~WL~~c~~~~~r~~E~ 394 (398)
.-++++||+.+.++..+.++++.+|| .++.++++.|||||+.+ ..|.|+..|+..|++||+++||.+|+...+.+||+
T Consensus 11 ~~~~~~sgl~~~~~~~l~~~i~~lgG~~~~~~~~~~~THlv~~~~~rT~K~l~ai~~g~~Iv~~~Wv~~~~~~g~~l~e~ 90 (199)
T 3u3z_A 11 TRTLVMTSMPSEKQNVVIQVVDKLKGFSIAPDVCETTTHVLSGKPLRTLNVLLGIARGCWVLSYDWVLWSLELGHWISEE 90 (199)
T ss_dssp CCEEEEESCCHHHHHHHHHHHHHHCSCEEESSCCTTEEEEEESSCCCBHHHHHHHHTTCEEEETHHHHHHHHHTSCCCSG
T ss_pred CeEEEEcCCCHHHHHHHHHHHHHcCCcEEecCCCCCCeEEEECCCCCCHHHHHHHHCCCcEEeHHHHHHHhhCCCCCChh
Confidence 45789999988777889999999977 78889999999999988 47999999999999999999999999999999999
Q ss_pred CCCC
Q 039039 395 VSFF 398 (398)
Q Consensus 395 ~Y~~ 398 (398)
+|.+
T Consensus 91 ~y~~ 94 (199)
T 3u3z_A 91 PFEL 94 (199)
T ss_dssp GGBC
T ss_pred hccc
Confidence 9964
No 25
>3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A*
Probab=99.35 E-value=6e-13 Score=123.60 Aligned_cols=81 Identities=15% Similarity=0.171 Sum_probs=72.0
Q ss_pred cccceeEEecCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEECCC-CCHHHHHHHhCCCeeeChhHHHHHHHhcCcCC
Q 039039 314 ILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDASITHVVSSNT-QSETFEWAEQENKCLVHPQWINDAYFLWCRQP 392 (398)
Q Consensus 314 vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~-~t~K~~~A~~~gi~IV~~~WL~~c~~~~~r~~ 392 (398)
.-++.+|+|||+.+.+. .++++.+||.+..+++ ++||||+.+. .|.|+..|+..|++||+++||.+|+..++.+|
T Consensus 5 ~~~~~~v~fSG~~~~~~---~~~i~~lGg~v~~~~~-~~THlV~~~~~RT~K~l~Aia~g~~IVs~~Wl~~~~~~~~~l~ 80 (220)
T 3l41_A 5 ASKRVYITFTGYDKKPS---IDNLKKLDMSITSNPS-KCTHLIAPRILRTSKFLCSIPYGPCVVTMDWINSCLKTHEIVD 80 (220)
T ss_dssp --CCEEEEECSCSSCCC---CGGGGGGTEEECSCTT-TCSEEECSSCCCBHHHHHHGGGCCEEECHHHHHHHHHHTSCCC
T ss_pred ccceEEEEEeccCCCCC---cchHhhcceeeccCch-hhhhhhhhhHhhhcceeecCCCCCeEEEhHHHHhhhhhhhccc
Confidence 34678999999988743 7788999999999885 6999999875 69999999999999999999999999999999
Q ss_pred CCCCCC
Q 039039 393 NDVSFF 398 (398)
Q Consensus 393 E~~Y~~ 398 (398)
|++|++
T Consensus 81 e~~y~l 86 (220)
T 3l41_A 81 EEPYLL 86 (220)
T ss_dssp SGGGBC
T ss_pred cCcccc
Confidence 999975
No 26
>2jw5_A DNA polymerase lambda; BRCT domain, family X polymerase, nonhomologous END joining (NHEJ), DNA damage, DNA repair, DNA replication, DNA synthesis; HET: DNA; NMR {Homo sapiens}
Probab=99.26 E-value=6.2e-12 Score=103.61 Aligned_cols=90 Identities=9% Similarity=-0.046 Sum_probs=68.2
Q ss_pred hhheecccceeEEecCCCCC-Cchhh-HHHHHHhCCEEeeecCCCccEEEECCCCCHHHHHHH-h-----CCCeeeChhH
Q 039039 309 KIRSRILMGCTILFGDDDFE-ELPLT-WSRAEEMGAICTLVTDASITHVVSSNTQSETFEWAE-Q-----ENKCLVHPQW 380 (398)
Q Consensus 309 ~~r~~vl~g~~i~fSg~~~~-~~~~l-~~la~~lGa~~~~~~~~~vTHlVa~~~~t~K~~~A~-~-----~gi~IV~~~W 380 (398)
+.+..+|+||++.|-..--. .+..+ ..+|..+||+++.++++.|||||+.+..+.+...+. + .+++||+++|
T Consensus 6 ~~~~~~F~g~~v~~~p~~~~~~r~~i~~~~a~~~Ga~v~~~~~~~vTHVVvd~~~s~~~~l~~l~~~~l~~~~~iV~~~W 85 (106)
T 2jw5_A 6 EEAEEWLSSLRAHVVRTGIGRARAELFEKQIVQHGGQLCPAQGPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVKSAW 85 (106)
T ss_dssp CCGGGCGGGSCCCBCTTTCCSSSTTHHHHHHHHTTCCCCSTTCTTCCEEEECSSSCHHHHHHHTTCSSCCSSCEEEEHHH
T ss_pred ccCcCEeCCeEEEEEecCCchHHHHHHHHHHHHcCCEEeeccCCCccEEEEcCCCCHHHHHHHHhhcccCCCcEEecCch
Confidence 45778999999997322111 23344 458999999999999999999999865554432221 1 3578999999
Q ss_pred HHHHHHhcCcCCCCCCCC
Q 039039 381 INDAYFLWCRQPNDVSFF 398 (398)
Q Consensus 381 L~~c~~~~~r~~E~~Y~~ 398 (398)
+.+|+..|+.+||+.|.+
T Consensus 86 v~dci~~~~llde~~y~~ 103 (106)
T 2jw5_A 86 LSLCLQERRLVDVAGFSI 103 (106)
T ss_dssp HHHHHHTCSCCCGGGTBC
T ss_pred HHHHHhcCcccCcccccc
Confidence 999999999999999964
No 27
>1l7b_A DNA ligase; BRCT, autostructure, structural genomics, NESG, PSI, protein structure initiative, northeast structural genomics consortium; HET: DNA; NMR {Thermus thermophilus} SCOP: c.15.1.2
Probab=99.23 E-value=1.2e-11 Score=99.12 Aligned_cols=76 Identities=12% Similarity=0.003 Sum_probs=70.9
Q ss_pred eecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEECCCCCHHHHHHHhCCCeeeChhHHHHHHHh
Q 039039 312 SRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDASITHVVSSNTQSETFEWAEQENKCLVHPQWINDAYFL 387 (398)
Q Consensus 312 ~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t~K~~~A~~~gi~IV~~~WL~~c~~~ 387 (398)
..+|.|.+|||+|.++..|.++..+++.+||++..+++..+||||+....+.|+++|.++||+||+.+|+.+++..
T Consensus 5 ~~~l~G~~~v~TG~l~~~R~e~~~~i~~~Gg~v~~sVskkt~~LV~g~~~gsK~~kA~~lgI~Ii~E~~f~~~l~~ 80 (92)
T 1l7b_A 5 GEALKGLTFVITGELSRPREEVKALLRRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVPTLTEEELYRLLEA 80 (92)
T ss_dssp CCSSTTCEEECSTTTTSCHHHHHHHHHHTTCEEESCCSSSCCCBEECSSSSTTHHHHHCSSSCCEEHHHHHHHHHH
T ss_pred CCCcCCcEEEEecCCCCCHHHHHHHHHHcCCEEeCcccCCeeEEEeCCCCChHHHHHHHcCCcEEeHHHHHHHHHh
Confidence 4579999999999998877799999999999999999999999999998889999999999999999999998763
No 28
>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B
Probab=99.22 E-value=1.2e-11 Score=117.55 Aligned_cols=88 Identities=9% Similarity=0.068 Sum_probs=77.5
Q ss_pred heecccceeEEecCCCCC-----------------------------CchhhHHHHHHhCCEEeeecCCC------ccEE
Q 039039 311 RSRILMGCTILFGDDDFE-----------------------------ELPLTWSRAEEMGAICTLVTDAS------ITHV 355 (398)
Q Consensus 311 r~~vl~g~~i~fSg~~~~-----------------------------~~~~l~~la~~lGa~~~~~~~~~------vTHl 355 (398)
.+.+|.|+.+++|+.... .+..+.++++++||++..++++. +|||
T Consensus 12 ~~~iF~g~~F~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~I~~~GG~v~~~~~~~~~~~~~~t~L 91 (259)
T 1kzy_C 12 NKTLFLGYAFLLTMATTSDKLASRSKLPDGPTGSSEEEEEFLEIPPFNKQYTESQLRAGAGYILEDFNEAQCNTAYQCLL 91 (259)
T ss_dssp STTTTTTEEEEECCCC---------------------------CCCCCHHHHHHHHHTTTCEECSSCCTTTTTTTCEEEE
T ss_pred CCcCcCCcEEEEEcccccccccccccccccccccccccccccccCcccHHHHHHHHHHCCCEEecCccccccccCCCeEE
Confidence 357999999999998763 23489999999999999999865 7999
Q ss_pred EECC-CCCHHHHHHHhCCCeeeChhHHHHHHHhcCcCCCCCCCC
Q 039039 356 VSSN-TQSETFEWAEQENKCLVHPQWINDAYFLWCRQPNDVSFF 398 (398)
Q Consensus 356 Va~~-~~t~K~~~A~~~gi~IV~~~WL~~c~~~~~r~~E~~Y~~ 398 (398)
|+.. ..|.|+.+|...|++||+++||.+|+...+.+|+++|+|
T Consensus 92 Ia~~~~rt~K~l~ala~g~~iVs~~Wl~dc~~~~~~l~~~~Y~l 135 (259)
T 1kzy_C 92 IADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLL 135 (259)
T ss_dssp EESSCCCSHHHHHHHHHTCCEEETHHHHHHHHHTSCCCGGGSBC
T ss_pred EcCCCCCcHHHHHHHhcCCCCccHHHHHHHHHcCCcCCHHHccC
Confidence 9976 679999999999999999999999999999999999975
No 29
>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A*
Probab=99.22 E-value=1.6e-11 Score=117.00 Aligned_cols=90 Identities=16% Similarity=0.182 Sum_probs=74.8
Q ss_pred hhhhheecccceeEEe-cCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEECCCCCHHHHHHHhCC-CeeeChhHHHHH
Q 039039 307 LAKIRSRILMGCTILF-GDDDFEELPLTWSRAEEMGAICTLVTDASITHVVSSNTQSETFEWAEQEN-KCLVHPQWINDA 384 (398)
Q Consensus 307 l~~~r~~vl~g~~i~f-Sg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t~K~~~A~~~g-i~IV~~~WL~~c 384 (398)
|+...+++|+|+++++ +|.....+..|.+++.++||++..+.++.+||+||.+ .|.|++.|++.| ++||+|+||.+|
T Consensus 3 ~~~~~s~lF~G~~f~V~sg~~~~~k~~L~~lI~~~GG~v~~n~~~~t~~iIa~~-~~~k~~~~~~~g~~~IV~p~Wv~Dc 81 (263)
T 3ii6_X 3 MGSKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPDTYCVIAGS-ENIRVKNIILSNKHDVVKPAWLLEC 81 (263)
T ss_dssp ---CCCCTTTTCEEEECCCC--CCHHHHHHHHHHTTCEECSSCCTTEEEEECSS-CCHHHHHHHHSCSCCEECHHHHHHH
T ss_pred CCCcCcccCCCeEEEEEcCCCCCCHHHHHHHHHHcCCEEEecCCCCEEEEEeCC-CCHHHHHHHhcCCCCEeehHHHHHH
Confidence 5667889999999986 6754445679999999999999998888877778765 469999999987 999999999999
Q ss_pred HHhcCcCCCCCCC
Q 039039 385 YFLWCRQPNDVSF 397 (398)
Q Consensus 385 ~~~~~r~~E~~Y~ 397 (398)
+.+++.+|-++|.
T Consensus 82 i~~~~llp~~p~~ 94 (263)
T 3ii6_X 82 FKTKSFVPWQPRF 94 (263)
T ss_dssp HHHTSCCCCCGGG
T ss_pred HhcCCcCCCCHHH
Confidence 9999999998884
No 30
>3ii6_X DNA ligase 4; XRCC4, NHEJ, DNA repair, BRCT, alternative splicing, coiled coil, DNA damage, DNA recombination, isopeptide bond, nucleus; HET: DNA; 2.40A {Homo sapiens} PDB: 2e2w_A*
Probab=99.22 E-value=6.6e-12 Score=119.60 Aligned_cols=89 Identities=11% Similarity=0.105 Sum_probs=68.4
Q ss_pred hheecccceeEEecCCCCCC---------ch-hhHHHHHHhCCEEeeecCCCccEEEECCCCC-HH-HHHHHh---CCCe
Q 039039 310 IRSRILMGCTILFGDDDFEE---------LP-LTWSRAEEMGAICTLVTDASITHVVSSNTQS-ET-FEWAEQ---ENKC 374 (398)
Q Consensus 310 ~r~~vl~g~~i~fSg~~~~~---------~~-~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t-~K-~~~A~~---~gi~ 374 (398)
.+..+|+||++.|.+..... +- .+..++..+||++..++++.|||||+.+..+ .+ .+..++ .+++
T Consensus 160 ~~~~lF~~~~vy~~~~~~~~~~~~~i~~~~l~~~~~~i~~~GG~v~~~l~~~vTHVVv~~~~~r~~~~~~~~~~~~~~~~ 239 (263)
T 3ii6_X 160 SPLSMFRRHTVYLDSYAVINDLSTKNEGTRLAIKALELRFHGAKVVSCLAEGVSHVIIGEDHSRVADFKAFRRTFKRKFK 239 (263)
T ss_dssp CGGGTTTTCEEEECCBSSTTCGGGBCCSSHHHHHHHHHHHTTCEEESSCCTTCCEEEECSCCTTHHHHHHHHHTCSSCCE
T ss_pred CcchhhCCeEEEEecccccCCcccccchhHHHHHHHHHHccCCEEecCCCCCceEEEECCCCccHHHHHHHHhhcCCCCE
Confidence 45679999999997653211 11 3467899999999999999999999986433 11 222222 3689
Q ss_pred eeChhHHHHHHHhcCcCCCCCCCC
Q 039039 375 LVHPQWINDAYFLWCRQPNDVSFF 398 (398)
Q Consensus 375 IV~~~WL~~c~~~~~r~~E~~Y~~ 398 (398)
||+++|+.+|+..++++||++|++
T Consensus 240 iV~~~Wv~dci~~~~~l~E~~Y~i 263 (263)
T 3ii6_X 240 ILKESWVTDSIDKCELQEENQYLI 263 (263)
T ss_dssp EEETHHHHHHHHTTSCCCGGGTBC
T ss_pred EeChHHHHHHHHcCCcCCHhhCCC
Confidence 999999999999999999999975
No 31
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=99.19 E-value=3e-11 Score=113.67 Aligned_cols=86 Identities=16% Similarity=0.110 Sum_probs=74.3
Q ss_pred ecccceeEEecCC--CCC-CchhhHHHHHHhCCEEeee-----c--CC-------------------CccEEEECCC-CC
Q 039039 313 RILMGCTILFGDD--DFE-ELPLTWSRAEEMGAICTLV-----T--DA-------------------SITHVVSSNT-QS 362 (398)
Q Consensus 313 ~vl~g~~i~fSg~--~~~-~~~~l~~la~~lGa~~~~~-----~--~~-------------------~vTHlVa~~~-~t 362 (398)
.+|+|+.+++||. .+. .+..+.++++++||++..+ + .. ..||||+... .|
T Consensus 1 ~lF~g~~F~ls~~~~~~~~~k~~L~~~I~~~GG~v~~~g~~~lf~~~~~~~~~~~~~~k~~~~~~~~~~t~lia~~~~rt 80 (241)
T 2vxb_A 1 LIFDDCVFAFSGPVHEDAYDRSALETVVQDHGGLVLDTGLRPLFNDPFKSKQKKLRHLKPQKRSKSWNQAFVVSDTFSRK 80 (241)
T ss_dssp CTTTTEEEEECCCSSTTSSCHHHHHHHHHHTTCEECTTCSGGGBCCSCC----CCCSCCBCGGGGGCSEEEEECSSCCCC
T ss_pred CCCCCcEEEEecCCCCchhhHHHHHHHHHHCCCEEecCcchhhccCccccccccccccccccccccccceEEEcCCCCCc
Confidence 4799999999998 444 4569999999999999886 2 11 2499999864 48
Q ss_pred HHHHHHHhCCCeeeChhHHHHHHHhcCcCCCCCCCC
Q 039039 363 ETFEWAEQENKCLVHPQWINDAYFLWCRQPNDVSFF 398 (398)
Q Consensus 363 ~K~~~A~~~gi~IV~~~WL~~c~~~~~r~~E~~Y~~ 398 (398)
.|+.+|.+.|++||+|+||.+|+...+.+|+++|+|
T Consensus 81 ~K~~~ala~gipiV~~~Wi~dc~~~~~~~~~~~ylL 116 (241)
T 2vxb_A 81 VKYLEALAFNIPCVHPQFIKQCLKMNRVVDFSPYLL 116 (241)
T ss_dssp HHHHHHHHHTCCEECTHHHHHHHHHTSCCCSGGGBB
T ss_pred HHHHHHHHcCCCEecHHHHHHHHHcCCcCChhhccC
Confidence 999999999999999999999999999999999975
No 32
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=99.15 E-value=9.9e-11 Score=96.75 Aligned_cols=81 Identities=12% Similarity=-0.046 Sum_probs=72.4
Q ss_pred hhhheecccceeEEecCCCCC-CchhhHHHHHHhCCEEeeecCCCccEEEECCCCC-HHHHHHHhCCCeeeChhHHHHHH
Q 039039 308 AKIRSRILMGCTILFGDDDFE-ELPLTWSRAEEMGAICTLVTDASITHVVSSNTQS-ETFEWAEQENKCLVHPQWINDAY 385 (398)
Q Consensus 308 ~~~r~~vl~g~~i~fSg~~~~-~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t-~K~~~A~~~gi~IV~~~WL~~c~ 385 (398)
++-...+|.|.+|||+|.++. .|.++..+++.+||++..+++..++|||+....+ .|+.+|.+.||+||+.+|+.+.+
T Consensus 26 p~~~~~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Gg~v~~sVSkkTd~LV~G~~~g~sK~~kA~~lgI~Ii~E~~f~~ll 105 (109)
T 2k6g_A 26 PKGAENCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLI 105 (109)
T ss_dssp CCCCTTTTTTCEEEEESBCSSCCHHHHHHHHHHTTCEEESSCCTTCCEEEECBCCCHHHHHHHHHHTCEEECHHHHHHHH
T ss_pred CCCCCCCCCCCEEEEeeeCCCCCHHHHHHHHHHcCCEeeCcccCCceEEEECCCCChHHHHHHHHcCCeEEeHHHHHHHH
Confidence 444556799999999999976 6789999999999999999999999999997655 99999999999999999999988
Q ss_pred Hhc
Q 039039 386 FLW 388 (398)
Q Consensus 386 ~~~ 388 (398)
...
T Consensus 106 ~~~ 108 (109)
T 2k6g_A 106 RNL 108 (109)
T ss_dssp HHT
T ss_pred HhC
Confidence 653
No 33
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.09 E-value=2.3e-10 Score=94.90 Aligned_cols=81 Identities=12% Similarity=-0.025 Sum_probs=72.6
Q ss_pred hhhhheecccceeEEecCCCCC-CchhhHHHHHHhCCEEeeecCCCccEEEECCCCC-HHHHHHHhCCCeeeChhHHHHH
Q 039039 307 LAKIRSRILMGCTILFGDDDFE-ELPLTWSRAEEMGAICTLVTDASITHVVSSNTQS-ETFEWAEQENKCLVHPQWINDA 384 (398)
Q Consensus 307 l~~~r~~vl~g~~i~fSg~~~~-~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t-~K~~~A~~~gi~IV~~~WL~~c 384 (398)
+|.-....|.|.+|||+|.++. .|.++..+++.+||++..+++..++|||+..... .|+++|+++||+|++.+|+.+.
T Consensus 15 ~P~~~~~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Ggkv~~sVSkkTd~LV~G~~~g~sKl~KA~~lgI~IisE~~f~~l 94 (112)
T 2ebu_A 15 IPKGAENCLEGLIFVITGVLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNL 94 (112)
T ss_dssp CCCCCSSSSTTCEEEECSCCSSSCHHHHHHHHHHTTCEECSSCCSSCCEEEECSSCCSHHHHHHHHHTCEEEEHHHHHHH
T ss_pred CCCCCCCCcCCCEEEEeeeCCCCCHHHHHHHHHHcCCEEeccccCCeeEEEecCCCChHHHHHHHHcCCeEEeHHHHHHH
Confidence 4444556899999999999976 6889999999999999999999999999997555 9999999999999999999999
Q ss_pred HHh
Q 039039 385 YFL 387 (398)
Q Consensus 385 ~~~ 387 (398)
+..
T Consensus 95 l~~ 97 (112)
T 2ebu_A 95 IRT 97 (112)
T ss_dssp HHH
T ss_pred Hhh
Confidence 874
No 34
>2ep8_A Pescadillo homolog 1; A/B/A 3 layers, nucleolus, ribosome biogenesis, DNA damage, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=2.5e-10 Score=92.89 Aligned_cols=81 Identities=20% Similarity=0.286 Sum_probs=66.4
Q ss_pred heecccceeEEecCCCCCCchhhHHHHHHhCCEEeee-----------cCCCccEEEECCCCCHHHHHHHhCCCeeeChh
Q 039039 311 RSRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLV-----------TDASITHVVSSNTQSETFEWAEQENKCLVHPQ 379 (398)
Q Consensus 311 r~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~-----------~~~~vTHlVa~~~~t~K~~~A~~~gi~IV~~~ 379 (398)
...+|+|+++++++-.| +..+..++.++||++..+ .+..+||+|+.++...+ +..+..+|.|+
T Consensus 9 ~~~LF~g~~F~i~~e~p--~~~le~~I~~~GG~v~~~~~~~~g~~~~~~~~~iTh~I~drp~~~~----~~~~r~~VqPq 82 (100)
T 2ep8_A 9 HKKLFEGLKFFLNREVP--REALAFIIRSFGGEVSWDKSLCIGATYDVTDSRITHQIVDRPGQQT----SVIGRCYVQPQ 82 (100)
T ss_dssp SCCTTSSCEEECCSSSC--HHHHHHHHHHTTCEEECCTTTSSCCCSCTTCTTCCEEECSCTTTSC----CBTTBEEECTH
T ss_pred hHHHcCCcEEEEecCCC--HHHHHHHHHHcCCEEEeccccccCcccccCCCceEEEEecccchhh----hcCCCeEEcch
Confidence 46789999999987543 458888999999999876 25789999998754322 23467899999
Q ss_pred HHHHHHHhcCcCCCCCCC
Q 039039 380 WINDAYFLWCRQPNDVSF 397 (398)
Q Consensus 380 WL~~c~~~~~r~~E~~Y~ 397 (398)
||+||+...+.+|+++|+
T Consensus 83 WV~Dcin~~~lLp~~~Y~ 100 (100)
T 2ep8_A 83 WVFDSVNARLLLPVAEYF 100 (100)
T ss_dssp HHHHHHHHTSCCCTTTCC
T ss_pred HHHHHHhcCCcCChhhcC
Confidence 999999999999999995
No 35
>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A
Probab=99.01 E-value=5.2e-10 Score=92.93 Aligned_cols=74 Identities=14% Similarity=0.100 Sum_probs=66.3
Q ss_pred eecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEECC---CCCHHHHHHHhCCCeeeChhHHHHHH
Q 039039 312 SRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDASITHVVSSN---TQSETFEWAEQENKCLVHPQWINDAY 385 (398)
Q Consensus 312 ~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~---~~t~K~~~A~~~gi~IV~~~WL~~c~ 385 (398)
..+|.|.+++|+|.+...|.++..+++.+||++...++..+||||+.+ ..+.|..+|++.||+||+.+||.++.
T Consensus 8 ~~~l~G~~~ViTG~l~~~R~e~k~~ie~~Ggkv~~sVskkT~~lV~g~~~e~~gsKl~kA~~lgI~IvsE~~l~~~~ 84 (113)
T 2cok_A 8 DKPLSNMKILTLGKLSRNKDEVKAMIEKLGGKLTGTANKASLCISTKKEVEKMNKKMEEVKEANIRVVSEDFLQDVS 84 (113)
T ss_dssp CCSSSSCEEEECSCCSSCHHHHHHHHHHTTCEEESCSTTCSEEECCHHHHHHCCHHHHHHHHTTCCEECTHHHHHHH
T ss_pred CCCcCCCEEEEEecCCCCHHHHHHHHHHCCCEEcCccccCccEEEECCCCCCCChHHHHHHHCCCcEEeHHHHHHHH
Confidence 457999999999999877789999999999999999999999999984 36799999999999999999966543
No 36
>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}
Probab=99.00 E-value=1.2e-10 Score=110.44 Aligned_cols=90 Identities=9% Similarity=0.087 Sum_probs=52.8
Q ss_pred hhheecccceeEEecCCCCCCc-hhhHHHHHHhCCEEeeecCCCccEEEECCCCC--H----HHHHHHhC---------C
Q 039039 309 KIRSRILMGCTILFGDDDFEEL-PLTWSRAEEMGAICTLVTDASITHVVSSNTQS--E----TFEWAEQE---------N 372 (398)
Q Consensus 309 ~~r~~vl~g~~i~fSg~~~~~~-~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t--~----K~~~A~~~---------g 372 (398)
.....+|+||+++|+|..+..+ ..+..++..+||+++.++++.+||||+...+. . +++.+... +
T Consensus 155 ~~~~~lF~g~~~yl~~~~~~~~~~~l~~~i~~~GG~v~~~l~~~t~hVV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (264)
T 1z56_C 155 RFPLFLFSNRIAYVPRRKISTEDDIIEMKIKLFGGKITDQQSLCNLIIIPYTDPILRKDCMNEVHEKIKEQIKASDTIPK 234 (264)
T ss_dssp CCCCC--------------------CHHHHHHHTTSCCCCSSSCSEEECCCSSTTTHHHHSSHHHHTTTTTTTSSSSCCC
T ss_pred cCchhhhCCeEEEEecCCCchhHHHHHHHHHHcCCEEecccCCCEEEEEeCCCccchHHHHHHHHHHHHhhcccccccCC
Confidence 3556799999999999865543 36677899999999999997778888754331 2 23332221 3
Q ss_pred C-eeeChhHHHHHHHhcCcCCCCCCCC
Q 039039 373 K-CLVHPQWINDAYFLWCRQPNDVSFF 398 (398)
Q Consensus 373 i-~IV~~~WL~~c~~~~~r~~E~~Y~~ 398 (398)
+ +||+|+||++|+..++++||++|..
T Consensus 235 ~~~iV~~~Wv~dci~~~~ll~e~~Y~~ 261 (264)
T 1z56_C 235 IARVVAPEWVDHSINENCQVPEEDFPV 261 (264)
T ss_dssp CCEEECTHHHHHHHTTSCCCSSCCC--
T ss_pred CCEEecHHHHHHHHHcCCcCCHHHcCC
Confidence 3 9999999999999999999999963
No 37
>3pc7_A DNA ligase 3; DNA repair, BRCT domain, protein:protein interactions, XRCC1 domain, DNA binding protein; HET: DNA MSE; 1.65A {Homo sapiens} SCOP: c.15.1.2 PDB: 3pc8_C* 1imo_A* 1in1_A* 3qvg_A*
Probab=98.92 E-value=1.3e-09 Score=86.31 Aligned_cols=77 Identities=17% Similarity=0.113 Sum_probs=64.2
Q ss_pred hhheecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecC-CCccEEEECCCCCHHHHHHHhCCCeeeChhHHHHHHHh
Q 039039 309 KIRSRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTD-ASITHVVSSNTQSETFEWAEQENKCLVHPQWINDAYFL 387 (398)
Q Consensus 309 ~~r~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~-~~vTHlVa~~~~t~K~~~A~~~gi~IV~~~WL~~c~~~ 387 (398)
..-..+|.|+++.+.+-++.. ..+.+.+.++||++..+.+ +++||+|+.+. ...+.++|+|+||++|+.+
T Consensus 11 ~~LpdiFsg~~~~l~~~v~~~-~~l~RyiiAfgG~v~~~~~~~~vTHvI~~~~--------~~~~~~~V~p~WI~dcI~k 81 (88)
T 3pc7_A 11 KVLLDIFTGVRLYLPPSTPDF-SRLRRYFVAFDGDLVQEFDMTSATHVLGSRD--------KNPAAQQVSPEWIWACIRK 81 (88)
T ss_dssp CCCCCCSTTCEECCCTTSTTH-HHHHHHHHHTTCEECCGGGGGGCSEEESCCT--------TCTTSEEECHHHHHHHHHH
T ss_pred CcCChhhcCeEEEccCCcCch-hhheeeeeecCCEEecccCCCcCeEEecCCC--------cCCCCcEEchHHHHHHHhC
Confidence 334568999999998877653 5788999999999988887 49999997663 2468899999999999999
Q ss_pred cCcCCCC
Q 039039 388 WCRQPND 394 (398)
Q Consensus 388 ~~r~~E~ 394 (398)
.+.+|++
T Consensus 82 ~~Ll~~~ 88 (88)
T 3pc7_A 82 RRLVAPS 88 (88)
T ss_dssp TSCCSCC
T ss_pred CcccCCC
Confidence 9999864
No 38
>2coe_A Deoxynucleotidyltransferase, terminal variant; BRCT domain, DNA polymerase, teminal deoxynucleotidyltransferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.86 E-value=6.9e-09 Score=86.88 Aligned_cols=86 Identities=13% Similarity=0.042 Sum_probs=65.7
Q ss_pred eecccceeEEecCCCCC-Cc-hhhHHHHHHhCCEEeeecCCCccEEEECCCCCHHHHHHHh-------CCCeeeChhHHH
Q 039039 312 SRILMGCTILFGDDDFE-EL-PLTWSRAEEMGAICTLVTDASITHVVSSNTQSETFEWAEQ-------ENKCLVHPQWIN 382 (398)
Q Consensus 312 ~~vl~g~~i~fSg~~~~-~~-~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t~K~~~A~~-------~gi~IV~~~WL~ 382 (398)
...|+|++|.|-..-.. .| .-+.+++...||++.+++++.|||||+.+...+.+..-++ .+.+||+..|+.
T Consensus 18 ~~~F~g~~iy~v~~~~g~~R~~~l~~l~r~~G~~V~~~ls~~VTHVVve~~~~~e~~~~l~~~~l~~~~~~~lv~i~Wl~ 97 (120)
T 2coe_A 18 DIKFQDLVVFILEKKMGTTRRALLMELARRKGFRVENELSDSVTHIVAENNSGSDVLEWLQAQKVQVSSQPELLDVSWLI 97 (120)
T ss_dssp CCSCTTCEEEEECTTTCHHHHHHHHHHHHHHTCEECSSCCTTCCEEEESSCCHHHHHHHHHHCCCCCSSCCEEEEHHHHH
T ss_pred ccccCCeEEEEeecccchHHHHHHHHHHHHcCCEEeeccCCCcCEEEecCCCHHHHHHHHhccccccccccEEeecHHHH
Confidence 36799999998443322 12 3567899999999999999999999997554333332222 257999999999
Q ss_pred HHHHhcCcCCCCCCC
Q 039039 383 DAYFLWCRQPNDVSF 397 (398)
Q Consensus 383 ~c~~~~~r~~E~~Y~ 397 (398)
+|+...+.+||+.|.
T Consensus 98 esmk~g~lv~ee~~~ 112 (120)
T 2coe_A 98 ECIGAGKPVEMTGKH 112 (120)
T ss_dssp HHHHTTSCCCCSSSS
T ss_pred HHHHcCCccCcccce
Confidence 999999999997763
No 39
>1z56_C DNA ligase IV; DNA repair, BRCT, NHEJ, XRCC4, DNA ligase, coiled-coil; HET: DNA; 3.92A {Saccharomyces cerevisiae}
Probab=98.83 E-value=3.7e-10 Score=107.13 Aligned_cols=86 Identities=13% Similarity=0.044 Sum_probs=68.5
Q ss_pred heecccceeEEe-cCCC-C-----CCchhhHHHHHHhCCEEeeecCCC-----ccEEEECCCCCHHHHHHHhCCCeeeCh
Q 039039 311 RSRILMGCTILF-GDDD-F-----EELPLTWSRAEEMGAICTLVTDAS-----ITHVVSSNTQSETFEWAEQENKCLVHP 378 (398)
Q Consensus 311 r~~vl~g~~i~f-Sg~~-~-----~~~~~l~~la~~lGa~~~~~~~~~-----vTHlVa~~~~t~K~~~A~~~gi~IV~~ 378 (398)
.+++|+|+++++ +|.. | ..+..|..++.++||++....... .||+|+.+ .|.|++.+.+.|++||+|
T Consensus 2 ~s~lF~g~~f~v~~~~~~p~~~~~~~~~~L~~li~~~GG~~~~~~~~~t~~~~~~~iI~~~-~t~k~~~~~~~~~~vV~p 80 (264)
T 1z56_C 2 ISNIFAGLLFYVLSDYVTEDTGIRITRAELEKTIVEHGGKLIYNVILKRHSIGDVRLISCK-TTTECKALIDRGYDILHP 80 (264)
T ss_dssp -CCCCCTTCCCCSEEEECCCCCSSSSCCCTHHHHHHHHTTSCCCSSCCCCCSSCCEEEECS-CCGGGGGGTTTTCCCBCS
T ss_pred ccccCCCcEEEEEcCCCCccccccCCHHHHHHHHHHcCCEEeecCCCCccCccceEEEecC-CcHHHHHHHhCCCCEEec
Confidence 357899999976 6643 2 135699999999999987644332 46777754 688988888888999999
Q ss_pred hHHHHHHHhcCcCCCCCCC
Q 039039 379 QWINDAYFLWCRQPNDVSF 397 (398)
Q Consensus 379 ~WL~~c~~~~~r~~E~~Y~ 397 (398)
+||.+|+..++.+|.++|.
T Consensus 81 ~Wv~dci~~~~llp~~~y~ 99 (264)
T 1z56_C 81 NWVLDCIAYKRLILIEPNY 99 (264)
T ss_dssp STTHHHHSSCSCCCCCSCB
T ss_pred hHHHHHhhcCCCCCCChHH
Confidence 9999999999999999984
No 40
>1l0b_A BRCA1; TANDEM-BRCT, three-helix bundle, unknown function; 2.30A {Rattus norvegicus} SCOP: c.15.1.3 c.15.1.3
Probab=98.70 E-value=1.3e-08 Score=94.07 Aligned_cols=88 Identities=11% Similarity=0.040 Sum_probs=61.3
Q ss_pred heecccceeEEecCCCCC-CchhhHHHHHHhCCEEeeecCC-----CccEEEECCC----CCHHHHH-HHhCCCeeeChh
Q 039039 311 RSRILMGCTILFGDDDFE-ELPLTWSRAEEMGAICTLVTDA-----SITHVVSSNT----QSETFEW-AEQENKCLVHPQ 379 (398)
Q Consensus 311 r~~vl~g~~i~fSg~~~~-~~~~l~~la~~lGa~~~~~~~~-----~vTHlVa~~~----~t~K~~~-A~~~gi~IV~~~ 379 (398)
+..+|+|+.++|+|-+.. .+..+..+++..||++...... .+||+|.... ...+++. |.+.|++||+++
T Consensus 114 ~~~lF~g~~~~~~~~~~~~~~~~l~~li~~~GG~v~~~~~~~~~~~~~~~~vvv~~~~~~~~~~~~~l~~~~~i~iVs~~ 193 (229)
T 1l0b_A 114 QEKLFEGLQIYCCEPFTNMPKDELERMLQLCGASVVKELPLLTRDTGAHPIVLVQPSAWTEDNDCPDIGQLCKGRLVMWD 193 (229)
T ss_dssp C--CCTTCEEEECSCCSSSCHHHHHHHHHHTTCEEECSSSCGGGCCSSCCEEEEC-------------------CEEETH
T ss_pred hhhhhcCceEEEEecCCCCCHHHHHHHHHHCCCEEeCCcccccccCCCceEEEEcCCccchhhhHHHHHHHcCCeEeehh
Confidence 468999999999886544 4669999999999999988865 3688555432 2345543 345789999999
Q ss_pred HHHHHHHhcCcCCCCCCCC
Q 039039 380 WINDAYFLWCRQPNDVSFF 398 (398)
Q Consensus 380 WL~~c~~~~~r~~E~~Y~~ 398 (398)
||.+|+..++.+|+++|++
T Consensus 194 WlldsI~~~~~~~~~~Y~l 212 (229)
T 1l0b_A 194 WVLDSISVYRCRDLDAYLV 212 (229)
T ss_dssp HHHHHHHTTSCCCGGGGBC
T ss_pred HHHHHHhcCCcCCccceEc
Confidence 9999999999999999975
No 41
>1t15_A Breast cancer type 1 susceptibility protein; protein-peptide complex, antitumor protein; HET: SEP; 1.85A {Homo sapiens} SCOP: c.15.1.3 c.15.1.3 PDB: 1jnx_X* 1t29_A* 1t2v_A* 1y98_A* 3coj_X* 3k0h_A* 3k0k_A* 3pxe_A* 3pxb_A 3pxc_X 1t2u_A 1n5o_X 3pxa_A 3k15_A* 3k16_A* 3pxd_A 2ing_X 1oqa_A
Probab=98.69 E-value=9.5e-09 Score=93.82 Aligned_cols=88 Identities=15% Similarity=0.105 Sum_probs=68.3
Q ss_pred heecccceeEEecCCCCC-CchhhHHHHHHhCCEEeeecCCC-----ccEEEECCCC----CHHHH-HHHhCCCeeeChh
Q 039039 311 RSRILMGCTILFGDDDFE-ELPLTWSRAEEMGAICTLVTDAS-----ITHVVSSNTQ----SETFE-WAEQENKCLVHPQ 379 (398)
Q Consensus 311 r~~vl~g~~i~fSg~~~~-~~~~l~~la~~lGa~~~~~~~~~-----vTHlVa~~~~----t~K~~-~A~~~gi~IV~~~ 379 (398)
+.++|+|++++|+|-+.. .+..+..+++..||++..++... ++|+|..... ..|++ .|.+.|++||+++
T Consensus 112 ~~~lF~g~~~~~~~~~~~~~~~~l~~li~~~GG~v~~~~~~~~~~~~~~~ivi~~~~~~~~~~~~~~~a~~~~~~iV~~~ 191 (214)
T 1t15_A 112 DRKIFRGLEICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFTLGTGVHPIVVVQPDAWTEDNGFHAIGQMCEAPVVTRE 191 (214)
T ss_dssp TSCTTTTCEEEECSCCSSSCHHHHHHHHHHTTCEECCSGGGCCCSTTCCEEEEECGGGCSSCGGGGSSTTTCSSCEEEHH
T ss_pred CCcccCCCEEEEEecCCCCCHHHHHHHHHHCCCEEecCccccccCCCCccEEEECCCcccchhhHHHHHHhcCCcEEecc
Confidence 567999999999886554 46699999999999999887652 2345554322 12433 3556799999999
Q ss_pred HHHHHHHhcCcCCCCCCCC
Q 039039 380 WINDAYFLWCRQPNDVSFF 398 (398)
Q Consensus 380 WL~~c~~~~~r~~E~~Y~~ 398 (398)
||.+|+.+++.+|+++|++
T Consensus 192 Wi~dsi~~~~~l~~~~Y~l 210 (214)
T 1t15_A 192 WVLDSVALYQCQELDTYLI 210 (214)
T ss_dssp HHHHHHHHTSCCCSGGGBC
T ss_pred HHHHhHhhcCcCCCcceee
Confidence 9999999999999999975
No 42
>3u3z_A Microcephalin; DNA repair, cell cycle regulation, cell cycle; HET: SEP PTR; 1.50A {Homo sapiens} PDB: 3szm_A* 3t1n_A* 3sht_A 3shv_A*
Probab=98.62 E-value=1.8e-08 Score=91.91 Aligned_cols=82 Identities=7% Similarity=0.094 Sum_probs=66.5
Q ss_pred hheeccccee-EEecCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEECCCCCHHHHHHHhCCCeeeChhHHHHHHHhc
Q 039039 310 IRSRILMGCT-ILFGDDDFEELPLTWSRAEEMGAICTLVTDASITHVVSSNTQSETFEWAEQENKCLVHPQWINDAYFLW 388 (398)
Q Consensus 310 ~r~~vl~g~~-i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t~K~~~A~~~gi~IV~~~WL~~c~~~~ 388 (398)
.+.++|+|+. +++++.....+..++.+++..||++..++. .++++|+.... ++..++++|+|+||.||+...
T Consensus 115 ~~~~LF~g~~~~~v~~~~~~~~~~L~~lI~~~GG~v~~~~~-~~~iiI~~~~~------~~~~~~~~V~p~Wi~DsI~~~ 187 (199)
T 3u3z_A 115 YRGTLFADQPVMFVSPASSPPVAKLCELVHLCGGRVSQVPR-QASIVIGPYSG------KKKATVKYLSEKWVLDSITQH 187 (199)
T ss_dssp CCCCTTTTSCCEEECTTCSSCHHHHHHHHHHTTCCBCSSGG-GCSEEESCCCS------CCCTTCEEECHHHHHHHHHHT
T ss_pred ccchhhCCCeEEEECCCCCCCHHHHHHHHHHcCCEEeccCC-CCEEEEeCCch------hccCCCcEEChhHHHHHHHcC
Confidence 3678999995 666776555567999999999999999885 46676654332 345789999999999999999
Q ss_pred CcCCCCCCCC
Q 039039 389 CRQPNDVSFF 398 (398)
Q Consensus 389 ~r~~E~~Y~~ 398 (398)
+.+|+++|++
T Consensus 188 ~llp~~~Y~~ 197 (199)
T 3u3z_A 188 KVCAPENYLL 197 (199)
T ss_dssp SCCCGGGGBC
T ss_pred CcCChHhccC
Confidence 9999999975
No 43
>2dun_A POL MU, DNA polymerase MU; layers A/B/A, parallel beta-sheet of 4 strands, non- homologous END jonting, somatic hypermutation, V(D)J recombination; HET: DNA; NMR {Homo sapiens} PDB: 2htf_A*
Probab=98.50 E-value=1.6e-07 Score=79.38 Aligned_cols=84 Identities=15% Similarity=0.130 Sum_probs=64.7
Q ss_pred ecccceeEEecCCCCC--CchhhHHHHHHhCCEEeeecCCCccEEEECCCCCHHHH-----HH--H---hCCCeeeChhH
Q 039039 313 RILMGCTILFGDDDFE--ELPLTWSRAEEMGAICTLVTDASITHVVSSNTQSETFE-----WA--E---QENKCLVHPQW 380 (398)
Q Consensus 313 ~vl~g~~i~fSg~~~~--~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t~K~~-----~A--~---~~gi~IV~~~W 380 (398)
..|.|++|.+-+.-.+ .+.-|.++|.+.|+++.+++++.|||||+.+...+-+. .. . ..+.++|+..|
T Consensus 9 ~~F~~v~iyive~kmG~sRr~fL~~la~~kGf~v~~~~S~~VTHVV~E~~s~~~~~~~L~~~~~~l~~~~~~~~lLdisW 88 (133)
T 2dun_A 9 TRFPGVAIYLVEPRMGRSRRAFLTGLARSKGFRVLDACSSEATHVVMEETSAEEAVSWQERRMAAAPPGCTPPALLDISW 88 (133)
T ss_dssp CSEEEEEEEECHHHHCSHHHHHHHHHHHHHTEEECSSCCTTCCEEEESSCCHHHHHHHHHHHHHHSCTTCCCCEEEEHHH
T ss_pred cccCccEEEEecCCcCHHHHHHHHHHHHhcCCEeccccCCCceEEEecCCCHHHHHHHHHHhhcccCcCCCCcEEeccHH
Confidence 4588899887654333 23478899999999999999999999999665443222 11 1 14678999999
Q ss_pred HHHHHHhcCcCCCCCC
Q 039039 381 INDAYFLWCRQPNDVS 396 (398)
Q Consensus 381 L~~c~~~~~r~~E~~Y 396 (398)
|.+|+...+.+||+.+
T Consensus 89 ltecm~~g~pV~~e~~ 104 (133)
T 2dun_A 89 LTESLGAGQPVPVECR 104 (133)
T ss_dssp HHHHHHHTSCCCCCTT
T ss_pred HHHHHhcCCcCCcccc
Confidence 9999999999999665
No 44
>2etx_A Mediator of DNA damage checkpoint protein 1; tandem BRCT domains histone gamma-H2AX, cell cycle; 1.33A {Homo sapiens} PDB: 2azm_A* 3k05_A* 2ado_A
Probab=98.42 E-value=2.6e-07 Score=84.66 Aligned_cols=87 Identities=13% Similarity=0.053 Sum_probs=70.1
Q ss_pred heecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecCCCc--cEEEECC-CCCHHHHHHHhCCCeeeChhHHHHHHHh
Q 039039 311 RSRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDASI--THVVSSN-TQSETFEWAEQENKCLVHPQWINDAYFL 387 (398)
Q Consensus 311 r~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~v--THlVa~~-~~t~K~~~A~~~gi~IV~~~WL~~c~~~ 387 (398)
+..+|+|++|++++........+..+++..||++.....+.. +|+|... ....+++.+.+.|+++|+++||.+|+..
T Consensus 112 ~~~lF~g~~~~~~~~~~~~~~~l~~li~~~GG~v~~~~~~~~~~~~ivI~~~~d~~~~~~~~~~~i~vvs~eWi~~sI~~ 191 (209)
T 2etx_A 112 ERRLLEGYEIYVTPGVQPPPPQMGEIISCCGGTYLPSMPRSYKPQRVVITCPQDFPHCSIPLRVGLPLLSPEFLLTGVLK 191 (209)
T ss_dssp HSCTTTTCEEEECTTCSSCHHHHHHHHHHTTCEECSSCCCSCCTTEEEECCGGGGGGCHHHHHHTCCEECTHHHHHHHHH
T ss_pred hCCCcCCcEEEEeCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCceEEEECcccHHHHHHHHHCCCeEEcHHHHHHHHHh
Confidence 347999999999987665666899999999999998776543 6777754 3345667778889999999999999998
Q ss_pred cCcCCCCCCCC
Q 039039 388 WCRQPNDVSFF 398 (398)
Q Consensus 388 ~~r~~E~~Y~~ 398 (398)
. ++++++|.+
T Consensus 192 q-~ld~e~y~l 201 (209)
T 2etx_A 192 Q-EAKPEAFVL 201 (209)
T ss_dssp T-CCCGGGGBC
T ss_pred c-ccChHHhee
Confidence 4 569999864
No 45
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=98.37 E-value=4.8e-07 Score=81.16 Aligned_cols=82 Identities=23% Similarity=0.271 Sum_probs=68.1
Q ss_pred EEEeCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCc
Q 039039 152 LVKLRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESS 224 (398)
Q Consensus 152 ~vklRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~ 224 (398)
..+..||+.++|+.+ +..+.+.|.|++.+.++..+++.++... +| +.+++.++.+. .+.+-+++++.+++.
T Consensus 82 ~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~-~f-d~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e 159 (216)
T 3kbb_A 82 LLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK-YF-DVMVFGDQVKNGKPDPEIYLLVLERLNVVPEK 159 (216)
T ss_dssp HCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GC-SEEECGGGSSSCTTSTHHHHHHHHHHTCCGGG
T ss_pred hcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc-cc-cccccccccCCCcccHHHHHHHHHhhCCCccc
Confidence 356789999999999 6789999999999999999999999875 89 55676776553 356667777888999
Q ss_pred EEEEeCCcccc
Q 039039 225 IVIVDDTESVW 235 (398)
Q Consensus 225 vvIiDD~~~vw 235 (398)
+|+|+|++.-.
T Consensus 160 ~l~VgDs~~Di 170 (216)
T 3kbb_A 160 VVVFEDSKSGV 170 (216)
T ss_dssp EEEEECSHHHH
T ss_pred eEEEecCHHHH
Confidence 99999998544
No 46
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=98.36 E-value=8.3e-07 Score=78.80 Aligned_cols=93 Identities=19% Similarity=0.047 Sum_probs=65.6
Q ss_pred EEEeCccHHHHHHHh-hccccEEEEcCCc-HHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEe
Q 039039 152 LVKLRPFVRSFLEEA-SRLFEISVCTMGN-REYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVD 229 (398)
Q Consensus 152 ~vklRPgl~eFL~~~-s~~yEi~I~T~g~-~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiD 229 (398)
.+.+.||+.++|+++ ++.+.++|.|++. +.++..+++.++... +|..-+.....-...+.+-++++..+++.+++|+
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ig 144 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFR-YFVHREIYPGSKITHFERLQQKTGIPFSQMIFFD 144 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTT-TEEEEEESSSCHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHh-hcceeEEEeCchHHHHHHHHHHcCCChHHEEEEe
Confidence 467899999999999 4569999999999 899999999998875 7843222221111133444556666788999999
Q ss_pred CCcccccCCCCceEEe
Q 039039 230 DTESVWGGRVENLITV 245 (398)
Q Consensus 230 D~~~vw~~~~~N~I~I 245 (398)
|++.-.......++++
T Consensus 145 D~~~Di~~a~~aG~~~ 160 (187)
T 2wm8_A 145 DERRNIVDVSKLGVTC 160 (187)
T ss_dssp SCHHHHHHHHTTTCEE
T ss_pred CCccChHHHHHcCCEE
Confidence 9985443333445554
No 47
>1kzy_C Tumor suppressor P53-binding protein 1; tandem-BRCT and linker complexed with non-BRCT protein, three-helix bundle, parallel beta sheet; 2.50A {Homo sapiens} SCOP: c.15.1.4 c.15.1.4 PDB: 1gzh_B
Probab=98.34 E-value=5.6e-07 Score=85.26 Aligned_cols=86 Identities=16% Similarity=0.149 Sum_probs=66.8
Q ss_pred heecccceeEEecCCCCCC-chhhHHHHHHhCCEEeeecC---------CCccEEEECCC--CCHHHHHHHhCCCeeeCh
Q 039039 311 RSRILMGCTILFGDDDFEE-LPLTWSRAEEMGAICTLVTD---------ASITHVVSSNT--QSETFEWAEQENKCLVHP 378 (398)
Q Consensus 311 r~~vl~g~~i~fSg~~~~~-~~~l~~la~~lGa~~~~~~~---------~~vTHlVa~~~--~t~K~~~A~~~gi~IV~~ 378 (398)
+..+|+|++|++++..... ...+..+++.+||++..... ...+|+|..+. ...+.+.|.+.|++||+.
T Consensus 152 ~~~LF~G~~I~i~~~~~~~~~~~~~~Il~~~Ga~vv~~~~s~~~~~d~~~~~~~viv~d~~~~~~~~~~a~~~~i~iVs~ 231 (259)
T 1kzy_C 152 RENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDPSCPASVLKCAEALQLPVVSQ 231 (259)
T ss_dssp CCCTTTTCEEEEEESCTTTTHHHHHHHHHHTTCSEEEEEESSSSCCCSCGGGCSEEEECTTCCHHHHHHHHHHTCCEECH
T ss_pred cCCCCCCeEEEEecCCCCCHHHHHHHHHHhcCCEEEeccccchhhhhccCCCCeEEEECCCChHHHHHHHHhcCCCEecH
Confidence 5789999999998876433 33455699999999887763 24566666542 245667888899999999
Q ss_pred hHHHHHHHhcCcCCCCCC
Q 039039 379 QWINDAYFLWCRQPNDVS 396 (398)
Q Consensus 379 ~WL~~c~~~~~r~~E~~Y 396 (398)
+||.+|+...+.+|+..+
T Consensus 232 EWv~~sI~~~~ll~~~~h 249 (259)
T 1kzy_C 232 EWVIQCLIVGERIGFKQH 249 (259)
T ss_dssp HHHHHHHHHTSCCCTTSS
T ss_pred HHHHHHHHhCCcCCCCcC
Confidence 999999999999999865
No 48
>2nte_A BARD-1, BRCA1-associated ring domain protein 1; BRCT, ring finger, zinc-binding protein, ubiquitin LI antitumor protein; 1.90A {Homo sapiens} PDB: 3fa2_A 2r1z_A
Probab=98.28 E-value=4.5e-07 Score=82.80 Aligned_cols=84 Identities=12% Similarity=0.040 Sum_probs=64.5
Q ss_pred heecccceeEEecCCCCC-CchhhHHHHHHhCCEEeeec-----------------------CCCccEEEECCCCCHH-H
Q 039039 311 RSRILMGCTILFGDDDFE-ELPLTWSRAEEMGAICTLVT-----------------------DASITHVVSSNTQSET-F 365 (398)
Q Consensus 311 r~~vl~g~~i~fSg~~~~-~~~~l~~la~~lGa~~~~~~-----------------------~~~vTHlVa~~~~t~K-~ 365 (398)
+..+|+|+.++++|-+.. .+..+..++++.||++.... ++.+||+|..+++... .
T Consensus 101 ~~~lF~g~~~~l~~~~~~~~~~~l~~lI~~~GG~v~~~~p~~~~~~~~~~~~v~~~~~~~~~~~~~t~~iv~~~~~~~~~ 180 (210)
T 2nte_A 101 LPKLFDGCYFYLWGTFKHHPKDNLIKLVTAGGGQILSRKPKPDSDVTQTINTVAYHARPDSDQRFCTQYIIYEDLCNYHP 180 (210)
T ss_dssp CCCTTTTCEEEECSCCSSSCHHHHHHHHHHTTCEEESSCCCGGGCGGGSSCCCCTTSCTTCGGGTCCEEEEECSCSSCCC
T ss_pred cccccCceEEEEeccCCCCCHHHHHHHHHHCCCEEEecCCCCccccccccceeeeccCCCcccccceEEEEeccccccCH
Confidence 468999999999986543 46799999999999998521 1457999987754211 1
Q ss_pred HHHHhCCCeeeChhHHHHHHHhcCcCCCC
Q 039039 366 EWAEQENKCLVHPQWINDAYFLWCRQPND 394 (398)
Q Consensus 366 ~~A~~~gi~IV~~~WL~~c~~~~~r~~E~ 394 (398)
..|...++++|+++||.+|+..++.+|.+
T Consensus 181 ~~~~~~~v~~V~~~Wl~dcI~~~~llp~~ 209 (210)
T 2nte_A 181 ERVRQGKVWKAPSSWFIDCVMSFELLPLD 209 (210)
T ss_dssp SCSEETTEEEEEHHHHHHHHHHTSCCCSC
T ss_pred HHHhccCcccccHHHHHHHHHhCeeccCC
Confidence 22445678999999999999999999875
No 49
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=98.18 E-value=1e-06 Score=78.39 Aligned_cols=77 Identities=21% Similarity=0.166 Sum_probs=61.7
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcH---HHHHHHHHHhCCCCCccceeEEEccCC----CC------ccccccccc
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNR---EYATRAVKLLDPDCKYFNSRIITREDF----KQ------KERKCLDLV 218 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~---~YA~~il~~LDP~~~~F~~ri~srd~~----~~------~~~K~L~~l 218 (398)
+.+.||+.++|+++. +.|.++|.|++.. .++..+++.++... +| +.+++.++. .. .+.+-++++
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~-~f-d~i~~~~~~~~~~~~~KP~p~~~~~~~~~~ 110 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIID-YF-DFIYASNSELQPGKMEKPDKTIFDFTLNAL 110 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGG-GE-EEEEECCTTSSTTCCCTTSHHHHHHHHHHH
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchh-he-EEEEEccccccccCCCCcCHHHHHHHHHHc
Confidence 468899999999995 5699999999987 99999999998875 88 567777664 11 234455666
Q ss_pred cCCCCcEEEEeCC
Q 039039 219 LGQESSIVIVDDT 231 (398)
Q Consensus 219 ~~~~~~vvIiDD~ 231 (398)
+.+++.+++|+|+
T Consensus 111 ~~~~~~~l~VGD~ 123 (189)
T 3ib6_A 111 QIDKTEAVMVGNT 123 (189)
T ss_dssp TCCGGGEEEEESB
T ss_pred CCCcccEEEECCC
Confidence 6788999999999
No 50
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=98.14 E-value=6.9e-06 Score=72.95 Aligned_cols=86 Identities=16% Similarity=0.142 Sum_probs=65.5
Q ss_pred eEEEEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccc-eeEEEccCCCC-----ccccccccccCCC
Q 039039 150 VLLVKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFN-SRIITREDFKQ-----KERKCLDLVLGQE 222 (398)
Q Consensus 150 ~~~vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~-~ri~srd~~~~-----~~~K~L~~l~~~~ 222 (398)
.....+.||+.++|+.+. +.+.++|.|++.+.++..+++.++... +|. ..+++.+.... .+.+-+++++.++
T Consensus 66 ~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~~i~~~~~~~~kp~~~~~~~~~~~~g~~~ 144 (205)
T 3m9l_A 66 AQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLAD-CFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSP 144 (205)
T ss_dssp EEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GSCGGGEECTTTSCCTTSSHHHHHHHHHTTCCG
T ss_pred hhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchh-hcCcceEEeCCCCCCCCCHHHHHHHHHHcCCCH
Confidence 345688999999999995 569999999999999999999998765 774 45777665221 2233445556678
Q ss_pred CcEEEEeCCccccc
Q 039039 223 SSIVIVDDTESVWG 236 (398)
Q Consensus 223 ~~vvIiDD~~~vw~ 236 (398)
+.++.|+|+..-..
T Consensus 145 ~~~i~iGD~~~Di~ 158 (205)
T 3m9l_A 145 SRMVMVGDYRFDLD 158 (205)
T ss_dssp GGEEEEESSHHHHH
T ss_pred HHEEEECCCHHHHH
Confidence 99999999985443
No 51
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=98.07 E-value=7.2e-07 Score=73.91 Aligned_cols=89 Identities=13% Similarity=0.094 Sum_probs=63.9
Q ss_pred eCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcEEE
Q 039039 155 LRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSIVI 227 (398)
Q Consensus 155 lRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~vvI 227 (398)
+.||+.++|+++. +.+.++|.|++.+.++..+++.++... +| +.+++.++... .+.+-++++..+++.+++
T Consensus 19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~-~f-~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 96 (137)
T 2pr7_A 19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNG-VV-DKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVL 96 (137)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTT-SS-SEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEE
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHh-hc-cEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 3499999999995 469999999999999999999886654 77 55666654332 233344555567789999
Q ss_pred EeCCcccccCCCCceEEe
Q 039039 228 VDDTESVWGGRVENLITV 245 (398)
Q Consensus 228 iDD~~~vw~~~~~N~I~I 245 (398)
|+|++.-.......++..
T Consensus 97 vgD~~~di~~a~~~G~~~ 114 (137)
T 2pr7_A 97 VDDSILNVRGAVEAGLVG 114 (137)
T ss_dssp EESCHHHHHHHHHHTCEE
T ss_pred EcCCHHHHHHHHHCCCEE
Confidence 999996554333445543
No 52
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=98.05 E-value=1.2e-05 Score=70.91 Aligned_cols=120 Identities=12% Similarity=0.051 Sum_probs=76.1
Q ss_pred hccCceEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEEeCccHHHHHHHhh-
Q 039039 89 LRMRKLHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEAS- 167 (398)
Q Consensus 89 l~~~Kl~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vklRPgl~eFL~~~s- 167 (398)
..++-.+++||+||||+...... |.. . ..-.+.+.||+.++|+++.
T Consensus 10 ~~~~~k~~~~D~Dgtl~~~~~~~------------------~~~-~--------------~~~~~~~~pg~~e~L~~L~~ 56 (176)
T 2fpr_A 10 HGSSQKYLFIDRDGTLISEPPSD------------------FQV-D--------------RFDKLAFEPGVIPQLLKLQK 56 (176)
T ss_dssp ---CCEEEEECSBTTTBCCC--C------------------CCC-C--------------SGGGCCBCTTHHHHHHHHHH
T ss_pred cCCcCcEEEEeCCCCeEcCCCCC------------------cCc-C--------------CHHHCcCCccHHHHHHHHHH
Confidence 34567789999999999874200 000 0 0011457899999999995
Q ss_pred ccccEEEEcCC---------------cHHHHHHHHHHhCCCCCccceeEE-E----ccCCCC------ccccccccccCC
Q 039039 168 RLFEISVCTMG---------------NREYATRAVKLLDPDCKYFNSRII-T----REDFKQ------KERKCLDLVLGQ 221 (398)
Q Consensus 168 ~~yEi~I~T~g---------------~~~YA~~il~~LDP~~~~F~~ri~-s----rd~~~~------~~~K~L~~l~~~ 221 (398)
+.|.++|.|++ .+.++..+++.++.. | +.++ | .+++.. .+.+-++++..+
T Consensus 57 ~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f-d~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi~ 132 (176)
T 2fpr_A 57 AGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ---F-DEVLICPHLPADECDCRKPKVKLVERYLAEQAMD 132 (176)
T ss_dssp TTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC---E-EEEEEECCCGGGCCSSSTTSCGGGGGGC----CC
T ss_pred CCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC---e-eEEEEcCCCCcccccccCCCHHHHHHHHHHcCCC
Confidence 56999999999 688999999988765 7 4454 4 244332 344455666667
Q ss_pred CCcEEEEeCCcccccCCCCceEEe
Q 039039 222 ESSIVIVDDTESVWGGRVENLITV 245 (398)
Q Consensus 222 ~~~vvIiDD~~~vw~~~~~N~I~I 245 (398)
++.+++|+|++.-.......++..
T Consensus 133 ~~~~l~VGD~~~Di~~A~~aG~~~ 156 (176)
T 2fpr_A 133 RANSYVIGDRATDIQLAENMGING 156 (176)
T ss_dssp GGGCEEEESSHHHHHHHHHHTSEE
T ss_pred HHHEEEEcCCHHHHHHHHHcCCeE
Confidence 889999999984333223445543
No 53
>1dgs_A DNA ligase; AMP complex, NAD+-dependent; HET: DNA AMP; 2.90A {Thermus filiformis} SCOP: a.60.2.2 b.40.4.6 d.142.2.2 PDB: 1v9p_A*
Probab=98.03 E-value=6.3e-07 Score=94.97 Aligned_cols=77 Identities=13% Similarity=0.010 Sum_probs=0.0
Q ss_pred eecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecCCCccEEEECCCCCHHHHHHHhCCCeeeChhHHHHHHHhc
Q 039039 312 SRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDASITHVVSSNTQSETFEWAEQENKCLVHPQWINDAYFLW 388 (398)
Q Consensus 312 ~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t~K~~~A~~~gi~IV~~~WL~~c~~~~ 388 (398)
...|.|.++||||.++..+.++..+++.+||++++++++++++||+....+.|..+|.+.||+|++.+|+.+.+...
T Consensus 585 ~~~l~G~~~v~TG~l~~~R~e~~~~i~~~Ggkv~~sVSkkTd~lV~G~~~gsKl~KA~~lgI~Ii~E~~f~~~l~~~ 661 (667)
T 1dgs_A 585 SDLLSGLTFVLTGELSRPREEVKALLGRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVAVLTEEEFWRFLKEK 661 (667)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred ccccCCCEEEEeCCCCCCHHHHHHHHHHcCCEEcCcccCCeeEEEECCCCChHHHHHHHCCCeEEeHHHHHHHHhcC
Confidence 34699999999999987677999999999999999999999999999888899999999999999999999988643
No 54
>2owo_A DNA ligase; protein-DNA complex, ligase-DNA complex; HET: DNA OMC AMP; 2.30A {Escherichia coli}
Probab=97.97 E-value=9.7e-07 Score=93.59 Aligned_cols=73 Identities=11% Similarity=0.050 Sum_probs=0.0
Q ss_pred ecccceeEEecCCCCC-CchhhHHHHHHhCCEEeeecCCCccEEEECCCCCHHHHHHHhCCCeeeChhHHHHHH
Q 039039 313 RILMGCTILFGDDDFE-ELPLTWSRAEEMGAICTLVTDASITHVVSSNTQSETFEWAEQENKCLVHPQWINDAY 385 (398)
Q Consensus 313 ~vl~g~~i~fSg~~~~-~~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t~K~~~A~~~gi~IV~~~WL~~c~ 385 (398)
..|.|.++||||.++. .+.++..+++.+||++++++++++++||+....+.|..+|.+.||+|++.+|+.+.+
T Consensus 596 ~~l~G~~~v~TG~l~~~~R~e~~~~i~~~Ggkv~~sVSkkTd~lV~G~~~gsKl~KA~~lgI~Ii~E~~f~~~l 669 (671)
T 2owo_A 596 SPFAGKTVVLTGSLSQMSRDDAKARLVELGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLL 669 (671)
T ss_dssp --------------------------------------------------------------------------
T ss_pred CcccCcEEEEcCCCCCCCHHHHHHHHHHcCCEEeCcccCceeEEEECCCCChHHHHHHHCCCcEEcHHHHHHHh
Confidence 4699999999999976 678999999999999999999999999999888899999999999999999998865
No 55
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=97.96 E-value=2e-05 Score=70.87 Aligned_cols=82 Identities=16% Similarity=0.125 Sum_probs=63.9
Q ss_pred EEEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCC-
Q 039039 152 LVKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQES- 223 (398)
Q Consensus 152 ~vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~- 223 (398)
...+.||+.++|+.+. ..+.++|+|++.+.++..+++.++-.. +| +.+++.++... .+.+-+++++.+++
T Consensus 101 ~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f-~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~ 178 (231)
T 3kzx_A 101 NFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTH-YF-DSIIGSGDTGTIKPSPEPVLAALTNINIEPSK 178 (231)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG-GC-SEEEEETSSSCCTTSSHHHHHHHHHHTCCCST
T ss_pred cceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchh-he-eeEEcccccCCCCCChHHHHHHHHHcCCCccc
Confidence 4578999999999995 469999999999999999999988765 78 55776666543 23344555666777
Q ss_pred cEEEEeCCcccc
Q 039039 224 SIVIVDDTESVW 235 (398)
Q Consensus 224 ~vvIiDD~~~vw 235 (398)
.++.|+|++.-.
T Consensus 179 ~~v~vGD~~~Di 190 (231)
T 3kzx_A 179 EVFFIGDSISDI 190 (231)
T ss_dssp TEEEEESSHHHH
T ss_pred CEEEEcCCHHHH
Confidence 899999999544
No 56
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=97.94 E-value=8.9e-06 Score=72.41 Aligned_cols=91 Identities=12% Similarity=0.057 Sum_probs=66.1
Q ss_pred EEeCccHHHHHHHhhc-cccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccC-----------CCC-----cccccc
Q 039039 153 VKLRPFVRSFLEEASR-LFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITRED-----------FKQ-----KERKCL 215 (398)
Q Consensus 153 vklRPgl~eFL~~~s~-~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~-----------~~~-----~~~K~L 215 (398)
+.++||+.++|+.+.+ .+.++|.|++.+.++..+++.++... +|.. +++.++ +.. .+.+-+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~-~~~~~~~~~~~~~~~~~~~~k~k~~~~~~~~ 151 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDA-AFSN-TLIVENDALNGLVTGHMMFSHSKGEMLLVLQ 151 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSE-EEEE-EEEEETTEEEEEEEESCCSTTHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcch-hccc-eeEEeCCEEEeeeccCCCCCCChHHHHHHHH
Confidence 5689999999999954 59999999999999999999998775 7854 433332 111 123334
Q ss_pred ccccCCCCcEEEEeCCcccccCCCCceEEe
Q 039039 216 DLVLGQESSIVIVDDTESVWGGRVENLITV 245 (398)
Q Consensus 216 ~~l~~~~~~vvIiDD~~~vw~~~~~N~I~I 245 (398)
++++.+++.++.|+|++.-.......++.+
T Consensus 152 ~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~ 181 (217)
T 3m1y_A 152 RLLNISKTNTLVVGDGANDLSMFKHAHIKI 181 (217)
T ss_dssp HHHTCCSTTEEEEECSGGGHHHHTTCSEEE
T ss_pred HHcCCCHhHEEEEeCCHHHHHHHHHCCCeE
Confidence 555667899999999985444444556665
No 57
>3sqd_A PAX-interacting protein 1; tandem BRCT domains, cell cycle; HET: SEP; 2.15A {Homo sapiens}
Probab=97.93 E-value=1.9e-05 Score=72.77 Aligned_cols=86 Identities=7% Similarity=-0.092 Sum_probs=69.3
Q ss_pred heecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecCC-------------CccEEEECCCCCHHHHHHHhCCCeeeC
Q 039039 311 RSRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTDA-------------SITHVVSSNTQSETFEWAEQENKCLVH 377 (398)
Q Consensus 311 r~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~-------------~vTHlVa~~~~t~K~~~A~~~gi~IV~ 377 (398)
+.++|+|+.+++++-+......+..+++..||++.....+ ....||+.+.....++.+.+.|++|++
T Consensus 119 ~~~LF~G~~f~it~~~~~~~~~l~~lI~~~GG~v~~~~p~~~~~~~~~~~~~~~~~ivis~~~d~~~~~~~~~~~~~v~s 198 (219)
T 3sqd_A 119 VSPLFKAKYFYITPGICPSLSTMKAIVECAGGKVLSKQPSFRKLMEHKQNSSLSEIILISCENDLHLCREYFARGIDVHN 198 (219)
T ss_dssp HSCTTTTEEEEECTTCSSCHHHHHHHHHHTTCEEESSCCCHHHHHHHHHCTTSCEEEEEECGGGGGGGHHHHHTTCCCEE
T ss_pred cccccCCcEEEEeCCCCCCHHHHHHHHHHCCCEEECCCCchHHhhhhhcccCCCCEEEEecccHHHHHHHHHHCCCcEEe
Confidence 6789999999999977666779999999999999887643 234566666667788888899999999
Q ss_pred hhHHHHHHHhcCcCCCCCCC
Q 039039 378 PQWINDAYFLWCRQPNDVSF 397 (398)
Q Consensus 378 ~~WL~~c~~~~~r~~E~~Y~ 397 (398)
++|+..|+.+.+- +=+.|-
T Consensus 199 ~E~il~~Il~q~l-d~~~~~ 217 (219)
T 3sqd_A 199 AEFVLTGVLTQTL-DYESYK 217 (219)
T ss_dssp THHHHHHHHHTCC-CTTTSB
T ss_pred HHHHHHHHHheee-cchhcc
Confidence 9999999995544 555553
No 58
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=97.92 E-value=5e-05 Score=68.09 Aligned_cols=91 Identities=13% Similarity=0.052 Sum_probs=68.0
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
+.+.||+.++|+.+. +.+.++|.|++.+.++..+++.++... +| +.+++.++... .+.+-+++++.+++.+
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 175 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSG-LF-DHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQI 175 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTT-TC-SEEEEGGGTTCCTTSHHHHTHHHHHHTSCGGGE
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHh-hc-CEEEEecccCCCCcCHHHHHHHHHHhCCCcccE
Confidence 567899999999995 459999999999999999999988775 78 56777776543 2344455666788999
Q ss_pred EEEeCCcccccCCCCceEEe
Q 039039 226 VIVDDTESVWGGRVENLITV 245 (398)
Q Consensus 226 vIiDD~~~vw~~~~~N~I~I 245 (398)
+.|+|+..-.......++.+
T Consensus 176 ~~vGD~~~Di~~a~~~G~~~ 195 (233)
T 3umb_A 176 LFVSSNGWDACGATWHGFTT 195 (233)
T ss_dssp EEEESCHHHHHHHHHHTCEE
T ss_pred EEEeCCHHHHHHHHHcCCEE
Confidence 99999974333323334443
No 59
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=97.91 E-value=1.4e-05 Score=72.15 Aligned_cols=90 Identities=16% Similarity=0.060 Sum_probs=60.0
Q ss_pred EEEEeCccHHHHHHHhhc-cccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCC
Q 039039 151 LLVKLRPFVRSFLEEASR-LFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQES 223 (398)
Q Consensus 151 ~~vklRPgl~eFL~~~s~-~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~ 223 (398)
..+.+.||+.++|+++.+ .|.++|.|++.+ ++..+++.++... +| +.+++.++... .+.+-+++++.++
T Consensus 92 ~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~-~f-~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~- 167 (220)
T 2zg6_A 92 GEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKK-YF-DALALSYEIKAVKPNPKIFGFALAKVGYPA- 167 (220)
T ss_dssp EEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGG-GC-SEEC-----------CCHHHHHHHHHCSSE-
T ss_pred cCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHh-He-eEEEeccccCCCCCCHHHHHHHHHHcCCCe-
Confidence 457899999999999965 699999999977 6889999988765 78 55666666532 2333444554444
Q ss_pred cEEEEeCCcc-cccCCCCceEEeC
Q 039039 224 SIVIVDDTES-VWGGRVENLITVG 246 (398)
Q Consensus 224 ~vvIiDD~~~-vw~~~~~N~I~I~ 246 (398)
++|+|++. -.......++.+.
T Consensus 168 --~~vgD~~~~Di~~a~~aG~~~i 189 (220)
T 2zg6_A 168 --VHVGDIYELDYIGAKRSYVDPI 189 (220)
T ss_dssp --EEEESSCCCCCCCSSSCSEEEE
T ss_pred --EEEcCCchHhHHHHHHCCCeEE
Confidence 99999986 4444445565543
No 60
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=97.91 E-value=3.4e-05 Score=69.45 Aligned_cols=79 Identities=13% Similarity=0.067 Sum_probs=62.1
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
+.+.||+.++|+.+. +.+.++|.|++.+.++..+++.++... +| +.+++.++... .+.+-+++++.+++.+
T Consensus 94 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f-~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 171 (232)
T 1zrn_A 94 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD-GF-DHLLSVDPVQVYKPDNRVYELAEQALGLDRSAI 171 (232)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GC-SEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHh-hh-heEEEecccCCCCCCHHHHHHHHHHcCCCcccE
Confidence 468899999999995 569999999999999999999988764 78 55777766542 2333445566678899
Q ss_pred EEEeCCcc
Q 039039 226 VIVDDTES 233 (398)
Q Consensus 226 vIiDD~~~ 233 (398)
++|+|+..
T Consensus 172 ~~iGD~~~ 179 (232)
T 1zrn_A 172 LFVASNAW 179 (232)
T ss_dssp EEEESCHH
T ss_pred EEEeCCHH
Confidence 99999983
No 61
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=97.89 E-value=2.9e-05 Score=67.71 Aligned_cols=87 Identities=9% Similarity=-0.017 Sum_probs=60.1
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcH---------------HHHHHHHHHhCCCCCccceeEEE-----ccCCCC--
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNR---------------EYATRAVKLLDPDCKYFNSRIIT-----REDFKQ-- 209 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~---------------~YA~~il~~LDP~~~~F~~ri~s-----rd~~~~-- 209 (398)
+++.||+.++|+++. +.|.++|.|++.+ .++..+++.++ .+|.. ++. .+++..
T Consensus 26 ~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g---~~~~~-~~~~~~~~~~~~~~~K 101 (179)
T 3l8h_A 26 WIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG---GVVDA-IFMCPHGPDDGCACRK 101 (179)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT---CCCCE-EEEECCCTTSCCSSST
T ss_pred ceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC---CceeE-EEEcCCCCCCCCCCCC
Confidence 356799999999995 5699999999987 77788888776 35633 442 233332
Q ss_pred ----ccccccccccCCCCcEEEEeCCcccccCCCCceE
Q 039039 210 ----KERKCLDLVLGQESSIVIVDDTESVWGGRVENLI 243 (398)
Q Consensus 210 ----~~~K~L~~l~~~~~~vvIiDD~~~vw~~~~~N~I 243 (398)
.+.+-+++++.+++.+++|+|+..-.......++
T Consensus 102 P~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~ 139 (179)
T 3l8h_A 102 PLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGC 139 (179)
T ss_dssp TSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC
Confidence 2344556667788999999999844433233444
No 62
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=97.89 E-value=2e-05 Score=70.76 Aligned_cols=78 Identities=13% Similarity=0.105 Sum_probs=62.7
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------cccccccccc-CCCCcE
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVL-GQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~-~~~~~v 225 (398)
..+.||+.++|+.+.+.+.+.|.|++.+.++..+++.++... +| +.+++.++... .+.+-+++++ .+++.+
T Consensus 102 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f-~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~ 179 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFP-FF-KDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHT 179 (238)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGG-GC-SEEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGE
T ss_pred CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHh-hh-heEEEecccCCCCCChHHHHHHHHHcCCCChhHe
Confidence 568899999999996559999999999999999999987664 78 55777766543 2334456666 688999
Q ss_pred EEEeCCc
Q 039039 226 VIVDDTE 232 (398)
Q Consensus 226 vIiDD~~ 232 (398)
+.|+|+.
T Consensus 180 i~vGD~~ 186 (238)
T 3ed5_A 180 LIIGDSL 186 (238)
T ss_dssp EEEESCT
T ss_pred EEECCCc
Confidence 9999996
No 63
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=97.89 E-value=4.1e-05 Score=68.42 Aligned_cols=79 Identities=15% Similarity=0.119 Sum_probs=62.6
Q ss_pred EEeCccHHHHHHHhhc-cccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEASR-LFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s~-~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
....||+.++|+.+.+ .+.++|+|++.+.++..+++.++... +| +.+++.++... .+.+-+++++.+++.+
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 172 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTN-SF-DHLISVDEVRLFKPHQKVYELAMDTLHLGESEI 172 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGG-GC-SEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChh-hc-ceeEehhhcccCCCChHHHHHHHHHhCCCcccE
Confidence 4678999999999954 59999999999999999999988764 78 55777776543 2334455566688999
Q ss_pred EEEeCCcc
Q 039039 226 VIVDDTES 233 (398)
Q Consensus 226 vIiDD~~~ 233 (398)
+.|+|+..
T Consensus 173 ~~iGD~~~ 180 (230)
T 3um9_A 173 LFVSCNSW 180 (230)
T ss_dssp EEEESCHH
T ss_pred EEEeCCHH
Confidence 99999984
No 64
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=97.87 E-value=2e-05 Score=70.48 Aligned_cols=89 Identities=17% Similarity=0.076 Sum_probs=67.0
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
..+.||+.++|+.+. ..+.++|.|++.+.++..+++.++-.. +| +.+++.++... .+.+-+++++.+++.+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f-~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~ 167 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDI-NK-INIVTRDDVSYGKPDPDLFLAAAKKIGAPIDEC 167 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCT-TS-SCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGE
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhh-hh-heeeccccCCCCCCChHHHHHHHHHhCCCHHHE
Confidence 578899999999995 459999999999999999999988765 77 55676666542 2334455666678999
Q ss_pred EEEeCCcccccCCCCceE
Q 039039 226 VIVDDTESVWGGRVENLI 243 (398)
Q Consensus 226 vIiDD~~~vw~~~~~N~I 243 (398)
+.|+|+..-.......++
T Consensus 168 i~iGD~~~Di~~a~~aG~ 185 (233)
T 3s6j_A 168 LVIGDAIWDMLAARRCKA 185 (233)
T ss_dssp EEEESSHHHHHHHHHTTC
T ss_pred EEEeCCHHhHHHHHHCCC
Confidence 999999954443333444
No 65
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=97.86 E-value=2.3e-05 Score=70.92 Aligned_cols=107 Identities=14% Similarity=0.003 Sum_probs=71.8
Q ss_pred ccCceEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEEeCccHHHHHHHhh-c
Q 039039 90 RMRKLHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEAS-R 168 (398)
Q Consensus 90 ~~~Kl~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vklRPgl~eFL~~~s-~ 168 (398)
..+...++||+||||+....... . .-.+.+.||+.++|+++. +
T Consensus 22 ~~~~k~v~~D~DGTL~~~~~~~~--~----------------------------------~~~~~~~pg~~e~L~~L~~~ 65 (211)
T 2gmw_A 22 AKSVPAIFLDRDGTINVDHGYVH--E----------------------------------IDNFEFIDGVIDAMRELKKM 65 (211)
T ss_dssp --CBCEEEECSBTTTBCCCSSCC--S----------------------------------GGGCCBCTTHHHHHHHHHHT
T ss_pred hhcCCEEEEcCCCCeECCCCccc--C----------------------------------cccCcCCcCHHHHHHHHHHC
Confidence 33456899999999997642110 0 001356799999999994 5
Q ss_pred cccEEEEcCCc---------------HHHHHHHHHHhCCCCCccceeEEEcc-----------CCCC------ccccccc
Q 039039 169 LFEISVCTMGN---------------REYATRAVKLLDPDCKYFNSRIITRE-----------DFKQ------KERKCLD 216 (398)
Q Consensus 169 ~yEi~I~T~g~---------------~~YA~~il~~LDP~~~~F~~ri~srd-----------~~~~------~~~K~L~ 216 (398)
.|.++|.|++. ..++..+++.++.. |..-+++.+ ++.. .+.+-++
T Consensus 66 G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---f~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~ 142 (211)
T 2gmw_A 66 GFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD---LDGIYYCPHHPQGSVEEFRQVCDCRKPHPGMLLSARD 142 (211)
T ss_dssp TCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCBTTCSSGGGBSCCSSSTTSCHHHHHHHH
T ss_pred CCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc---eEEEEECCcCCCCcccccCccCcCCCCCHHHHHHHHH
Confidence 79999999999 58999999988754 534333322 1211 2333445
Q ss_pred cccCCCCcEEEEeCCcccc
Q 039039 217 LVLGQESSIVIVDDTESVW 235 (398)
Q Consensus 217 ~l~~~~~~vvIiDD~~~vw 235 (398)
++..+++.+++|+|+..-.
T Consensus 143 ~lgi~~~~~~~VGD~~~Di 161 (211)
T 2gmw_A 143 YLHIDMAASYMVGDKLEDM 161 (211)
T ss_dssp HHTBCGGGCEEEESSHHHH
T ss_pred HcCCCHHHEEEEcCCHHHH
Confidence 5566788999999998433
No 66
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=97.85 E-value=4.6e-05 Score=69.14 Aligned_cols=79 Identities=16% Similarity=0.157 Sum_probs=62.2
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
+.+.||+.++|+.+. +.+.++|.|++.+.++..+++.++... +| +.+++.++... .+.+-+++++.+++.+
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f-~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 181 (240)
T 2no4_A 104 LSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDR-VL-DSCLSADDLKIYKPDPRIYQFACDRLGVNPNEV 181 (240)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GC-SEEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHH-Hc-CEEEEccccCCCCCCHHHHHHHHHHcCCCcccE
Confidence 467899999999995 569999999999999999999988765 78 55777766543 2333455666678899
Q ss_pred EEEeCCcc
Q 039039 226 VIVDDTES 233 (398)
Q Consensus 226 vIiDD~~~ 233 (398)
+.|+|+..
T Consensus 182 ~~iGD~~~ 189 (240)
T 2no4_A 182 CFVSSNAW 189 (240)
T ss_dssp EEEESCHH
T ss_pred EEEeCCHH
Confidence 99999984
No 67
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=97.79 E-value=9.7e-06 Score=71.95 Aligned_cols=95 Identities=7% Similarity=-0.003 Sum_probs=68.2
Q ss_pred EEEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHH------hCCCCCccceeEEEccCCCC------cccccccccc
Q 039039 152 LVKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKL------LDPDCKYFNSRIITREDFKQ------KERKCLDLVL 219 (398)
Q Consensus 152 ~vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~------LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~ 219 (398)
...+.||+.++|+.+.+.+.++|.|++.+.++..+++. ++.. .+| +.+++.++... .+.+-+++++
T Consensus 87 ~~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~-~~f-~~~~~~~~~~~~Kp~~~~~~~~~~~~~ 164 (211)
T 2i6x_A 87 LEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLD-SFF-DKVYASCQMGKYKPNEDIFLEMIADSG 164 (211)
T ss_dssp EEEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGG-GGS-SEEEEHHHHTCCTTSHHHHHHHHHHHC
T ss_pred hcccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHH-HHc-CeEEeecccCCCCCCHHHHHHHHHHhC
Confidence 46789999999999977999999999999999988877 4444 367 55666655432 2333455566
Q ss_pred CCCCcEEEEeCCcccccCCCCceEEeCcc
Q 039039 220 GQESSIVIVDDTESVWGGRVENLITVGSY 248 (398)
Q Consensus 220 ~~~~~vvIiDD~~~vw~~~~~N~I~I~~y 248 (398)
.+++.++.|+|++.-.......++.+..+
T Consensus 165 ~~~~~~~~igD~~~Di~~a~~aG~~~~~~ 193 (211)
T 2i6x_A 165 MKPEETLFIDDGPANVATAERLGFHTYCP 193 (211)
T ss_dssp CCGGGEEEECSCHHHHHHHHHTTCEEECC
T ss_pred CChHHeEEeCCCHHHHHHHHHcCCEEEEE
Confidence 67899999999996544333455655443
No 68
>2vxb_A DNA repair protein RHP9; BRCT, nucleus, cell cycle, DNA damage, DNA replication inhibitor, phosphoprotein, checkpoint signalling; HET: DNA; 2.3A {Schizosaccharomyces pombe} PDB: 2vxc_A*
Probab=97.76 E-value=2.9e-05 Score=72.62 Aligned_cols=79 Identities=18% Similarity=0.138 Sum_probs=59.8
Q ss_pred hheecccceeEEecCCCCC-C------------chhhHHHHHHhCCEE--eeecCCCccEEEECCCCCHHHHHHHhCCCe
Q 039039 310 IRSRILMGCTILFGDDDFE-E------------LPLTWSRAEEMGAIC--TLVTDASITHVVSSNTQSETFEWAEQENKC 374 (398)
Q Consensus 310 ~r~~vl~g~~i~fSg~~~~-~------------~~~l~~la~~lGa~~--~~~~~~~vTHlVa~~~~t~K~~~A~~~gi~ 374 (398)
-|.++|.|++|.|..-... . ......+++.+||++ .++++...+|+|...... .|.+.+++
T Consensus 147 ~~~~Lf~g~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~Ga~~~~v~~~~~~~~d~v~~~~~~----~~~~~~~~ 222 (241)
T 2vxb_A 147 ARKGPLFGKKILFIIPEAKSWQKKIENTEQGQKALAHVYHALALGADVEIRPNVAHLECDLILTMDGN----IVDETNCP 222 (241)
T ss_dssp HCCCTTTTCEEEECCCC------------CHHHHHHHHHHHHHTTCEEECCSCCSSCCCSEEECSSSC----CCSSCSSC
T ss_pred hcCcCCCCcEEEEEeCCCcccccccccccccchHHHHHHHHHHcCCceecccccccCCccEEEECCcc----ccccCCCC
Confidence 4778999999988642211 1 135567999999999 555666778999975443 25678999
Q ss_pred eeChhHHHHHHHhcCcCC
Q 039039 375 LVHPQWINDAYFLWCRQP 392 (398)
Q Consensus 375 IV~~~WL~~c~~~~~r~~ 392 (398)
||+++||.+|+...+++|
T Consensus 223 iV~~eWv~~~i~~g~~l~ 240 (241)
T 2vxb_A 223 VVDPEWIVECLISQSDIS 240 (241)
T ss_dssp EECHHHHHHHHHHTSCTT
T ss_pred EecHHHHHHHHHhceecC
Confidence 999999999999999876
No 69
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=97.76 E-value=2.3e-05 Score=67.35 Aligned_cols=114 Identities=11% Similarity=-0.015 Sum_probs=75.4
Q ss_pred eEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEEeCccHHHHHHHhh-ccccE
Q 039039 94 LHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEAS-RLFEI 172 (398)
Q Consensus 94 l~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vklRPgl~eFL~~~s-~~yEi 172 (398)
..+++|+||||+++...- +. .....-.+.|+..++|+++. +.+.+
T Consensus 10 k~v~~DlDGTL~~~~~~~--~~--------------------------------~~~~~~~~~~~~~~~l~~l~~~g~~~ 55 (162)
T 2p9j_A 10 KLLIMDIDGVLTDGKLYY--TE--------------------------------HGETIKVFNVLDGIGIKLLQKMGITL 55 (162)
T ss_dssp CEEEECCTTTTSCSEEEE--ET--------------------------------TEEEEEEEEHHHHHHHHHHHTTTCEE
T ss_pred eEEEEecCcceECCceee--cC--------------------------------CCceeeeecccHHHHHHHHHHCCCEE
Confidence 468999999999875310 00 00233456799999999995 56999
Q ss_pred EEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEeCCcccccCCCCceEEeC
Q 039039 173 SVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVDDTESVWGGRVENLITVG 246 (398)
Q Consensus 173 ~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiDD~~~vw~~~~~N~I~I~ 246 (398)
+|.|++.+.++..+++.++... +|.. .......+.+-++.+..+++.++.|+|+..-.......++.+.
T Consensus 56 ~i~T~~~~~~~~~~l~~~gl~~-~~~~----~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~ 124 (162)
T 2p9j_A 56 AVISGRDSAPLITRLKELGVEE-IYTG----SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVA 124 (162)
T ss_dssp EEEESCCCHHHHHHHHHTTCCE-EEEC----C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred EEEeCCCcHHHHHHHHHcCCHh-hccC----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 9999999999999999997663 5522 1111112233344555577899999999854433334556543
No 70
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=97.67 E-value=1.5e-05 Score=72.17 Aligned_cols=94 Identities=12% Similarity=0.006 Sum_probs=67.6
Q ss_pred EeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHh---CCCC--CccceeEEEccCCCC------ccccccccccCCC
Q 039039 154 KLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLL---DPDC--KYFNSRIITREDFKQ------KERKCLDLVLGQE 222 (398)
Q Consensus 154 klRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~L---DP~~--~~F~~ri~srd~~~~------~~~K~L~~l~~~~ 222 (398)
.+.||+.++|+.+.+.|.++|.|++.+.++..+++.| ...+ .+| +.+++.++... .+.+-+++++.++
T Consensus 112 ~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~f-d~i~~~~~~~~~KP~~~~~~~~~~~~g~~~ 190 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYF-EKTYLSYEMKMAKPEPEIFKAVTEDAGIDP 190 (229)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHC-SEEEEHHHHTCCTTCHHHHHHHHHHHTCCG
T ss_pred hccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhC-CEEEeecccCCCCCCHHHHHHHHHHcCCCH
Confidence 4679999999999666999999999999999888776 4443 257 55776665442 2345556667788
Q ss_pred CcEEEEeCCcccccCCCCceEEeCcc
Q 039039 223 SSIVIVDDTESVWGGRVENLITVGSY 248 (398)
Q Consensus 223 ~~vvIiDD~~~vw~~~~~N~I~I~~y 248 (398)
+.+++|+|++.-.......++.+.-+
T Consensus 191 ~~~~~vGD~~~Di~~a~~aG~~~i~v 216 (229)
T 4dcc_A 191 KETFFIDDSEINCKVAQELGISTYTP 216 (229)
T ss_dssp GGEEEECSCHHHHHHHHHTTCEEECC
T ss_pred HHeEEECCCHHHHHHHHHcCCEEEEE
Confidence 99999999995443334456555433
No 71
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=97.67 E-value=4.2e-05 Score=74.23 Aligned_cols=92 Identities=12% Similarity=0.090 Sum_probs=64.4
Q ss_pred EEeCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccC---------CCC------ccccccc
Q 039039 153 VKLRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITRED---------FKQ------KERKCLD 216 (398)
Q Consensus 153 vklRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~---------~~~------~~~K~L~ 216 (398)
+.++||+.++|+.+ .+.+.++|.|++.+.++..+++.++-.. +|...+...+. ... .+.+-++
T Consensus 178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~-~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~~~~~~~ 256 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDY-AFSNTVEIRDNVLTDNITLPIMNAANKKQTLVDLAA 256 (317)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCe-EEEEEEEeeCCeeeeeEecccCCCCCCHHHHHHHHH
Confidence 46999999999999 4669999999999999999999998765 77655432221 001 1223344
Q ss_pred cccCCCCcEEEEeCCcccccCCCCceEEe
Q 039039 217 LVLGQESSIVIVDDTESVWGGRVENLITV 245 (398)
Q Consensus 217 ~l~~~~~~vvIiDD~~~vw~~~~~N~I~I 245 (398)
+++.+++.++.|+|++.-.......++.+
T Consensus 257 ~lgv~~~~~i~VGDs~~Di~aa~~AG~~v 285 (317)
T 4eze_A 257 RLNIATENIIACGDGANDLPMLEHAGTGI 285 (317)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred HcCCCcceEEEEeCCHHHHHHHHHCCCeE
Confidence 45557889999999985443333345544
No 72
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=97.66 E-value=0.00017 Score=67.22 Aligned_cols=81 Identities=15% Similarity=0.076 Sum_probs=62.5
Q ss_pred EEeCccHHHHHHHhh-ccc--cEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC----------cccccccccc
Q 039039 153 VKLRPFVRSFLEEAS-RLF--EISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ----------KERKCLDLVL 219 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~y--Ei~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~----------~~~K~L~~l~ 219 (398)
+.+.||+.++|+.+. ..+ .+.|.|++.+.++..+++.++... +| +.+++.++... .+.+-+++++
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~f-d~v~~~~~~~~~~~~~Kp~~~~~~~~~~~lg 218 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIAD-LF-DGLTYCDYSRTDTLVCKPHVKAFEKAMKESG 218 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTT-SC-SEEECCCCSSCSSCCCTTSHHHHHHHHHHHT
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCccc-cc-ceEEEeccCCCcccCCCcCHHHHHHHHHHcC
Confidence 567899999999995 578 999999999999999999998775 78 44665554321 1233455566
Q ss_pred CCC-CcEEEEeCCcccc
Q 039039 220 GQE-SSIVIVDDTESVW 235 (398)
Q Consensus 220 ~~~-~~vvIiDD~~~vw 235 (398)
.++ +.+++|+|++.-.
T Consensus 219 i~~~~~~i~vGD~~~Di 235 (282)
T 3nuq_A 219 LARYENAYFIDDSGKNI 235 (282)
T ss_dssp CCCGGGEEEEESCHHHH
T ss_pred CCCcccEEEEcCCHHHH
Confidence 677 9999999998444
No 73
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=97.66 E-value=3.2e-05 Score=77.85 Aligned_cols=107 Identities=16% Similarity=0.089 Sum_probs=74.2
Q ss_pred ccCceEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEEeCccHHHHHHHh-hc
Q 039039 90 RMRKLHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEA-SR 168 (398)
Q Consensus 90 ~~~Kl~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vklRPgl~eFL~~~-s~ 168 (398)
..+...++||+||||+.+..... |. ..+ .-+..+-||+.++|+.+ .+
T Consensus 55 ~~~~k~v~fD~DGTL~~~~~~~~-----------------~~--~~~-------------~~~~~~~pgv~e~L~~L~~~ 102 (416)
T 3zvl_A 55 KPQGKVAAFDLDGTLITTRSGKV-----------------FP--TSP-------------SDWRILYPEIPKKLQELAAE 102 (416)
T ss_dssp CCCSSEEEECSBTTTEECSSCSS-----------------SC--SST-------------TCCEESCTTHHHHHHHHHHT
T ss_pred CCCCeEEEEeCCCCccccCCCcc-----------------CC--CCH-------------HHhhhhcccHHHHHHHHHHC
Confidence 34566899999999998753100 00 000 11223679999999999 56
Q ss_pred cccEEEEcCCc------------HHHHHHHHHHhCCCCCccceeEEEccCCCC------cccccccccc----CCCCcEE
Q 039039 169 LFEISVCTMGN------------REYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVL----GQESSIV 226 (398)
Q Consensus 169 ~yEi~I~T~g~------------~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~----~~~~~vv 226 (398)
.|.++|.|+.. +.++..+++.++. .| +.+++.+++.. .+.+-+++++ .+++.++
T Consensus 103 G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl---~f-d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~v~~~~~l 178 (416)
T 3zvl_A 103 GYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGV---PF-QVLVATHAGLNRKPVSGMWDHLQEQANEGIPISVEDSV 178 (416)
T ss_dssp TCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTS---CC-EEEEECSSSTTSTTSSHHHHHHHHHSSTTCCCCGGGCE
T ss_pred CCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCC---CE-EEEEECCCCCCCCCCHHHHHHHHHHhCCCCCCCHHHeE
Confidence 79999999966 3448888888865 37 56787877653 2444555555 5788999
Q ss_pred EEeCCc
Q 039039 227 IVDDTE 232 (398)
Q Consensus 227 IiDD~~ 232 (398)
+|.|+.
T Consensus 179 ~VGDs~ 184 (416)
T 3zvl_A 179 FVGDAA 184 (416)
T ss_dssp EECSCS
T ss_pred EEECCC
Confidence 999996
No 74
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=97.65 E-value=3.2e-05 Score=69.59 Aligned_cols=85 Identities=8% Similarity=-0.038 Sum_probs=58.1
Q ss_pred EEeCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCC-CCc
Q 039039 153 VKLRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQ-ESS 224 (398)
Q Consensus 153 vklRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~-~~~ 224 (398)
+++.||+.++|+.+ .+.|.+.|.|+..+..+..++ . .+| +.+++.++... .+.+-+.++... .+.
T Consensus 35 ~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~---~---~~~-d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~ 107 (196)
T 2oda_A 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA---A---PVN-DWMIAAPRPTAGWPQPDACWMALMALNVSQLEG 107 (196)
T ss_dssp GSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH---T---TTT-TTCEECCCCSSCTTSTHHHHHHHHHTTCSCSTT
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc---C---ccC-CEEEECCcCCCCCCChHHHHHHHHHcCCCCCcc
Confidence 35679999999999 567999999999998885444 3 356 55777776542 234555666554 478
Q ss_pred EEEEeCCcccccCCCCceEE
Q 039039 225 IVIVDDTESVWGGRVENLIT 244 (398)
Q Consensus 225 vvIiDD~~~vw~~~~~N~I~ 244 (398)
+++|.|++.-.......++.
T Consensus 108 ~v~VGDs~~Di~aA~~aG~~ 127 (196)
T 2oda_A 108 CVLISGDPRLLQSGLNAGLW 127 (196)
T ss_dssp CEEEESCHHHHHHHHHHTCE
T ss_pred EEEEeCCHHHHHHHHHCCCE
Confidence 99999998433332344443
No 75
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=97.63 E-value=7.3e-05 Score=67.21 Aligned_cols=89 Identities=12% Similarity=0.129 Sum_probs=60.4
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCC-CccceeE--------EEccCCC----C-----cccc
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDC-KYFNSRI--------ITREDFK----Q-----KERK 213 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~-~~F~~ri--------~srd~~~----~-----~~~K 213 (398)
+.++||+.++|+.+. +.+.++|.|++.+.++..+++.++... .+|...+ .+.+... . .+.+
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~ 164 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKL 164 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCchHHHHHH
Confidence 578999999999995 569999999999999999999988763 4775543 2222211 0 0111
Q ss_pred ccccccCCCCcEEEEeCCcccccCCCCceE
Q 039039 214 CLDLVLGQESSIVIVDDTESVWGGRVENLI 243 (398)
Q Consensus 214 ~L~~l~~~~~~vvIiDD~~~vw~~~~~N~I 243 (398)
-+++++. +.+++|+|++.-.......++
T Consensus 165 ~~~~~~~--~~~~~vGDs~~Di~~a~~ag~ 192 (225)
T 1nnl_A 165 LKEKFHF--KKIIMIGDGATDMEACPPADA 192 (225)
T ss_dssp HHHHHCC--SCEEEEESSHHHHTTTTTSSE
T ss_pred HHHHcCC--CcEEEEeCcHHhHHHHHhCCe
Confidence 1222222 679999999955544444555
No 76
>3t7k_A RTT107, regulator of TY1 transposition protein 107; BRCT, DNA repair, phospho-peptide, protein binding; HET: SEP; 2.03A {Saccharomyces cerevisiae} PDB: 3t7j_A* 3t7i_A
Probab=97.62 E-value=0.00018 Score=66.96 Aligned_cols=97 Identities=8% Similarity=-0.033 Sum_probs=70.0
Q ss_pred cchhhhhhhheecccceeEEecCCCCCCch-hhHHHHHHhCCEEeeecCC--CccEEEECC-CCCHHHHHHHhCCC--ee
Q 039039 302 DVRSCLAKIRSRILMGCTILFGDDDFEELP-LTWSRAEEMGAICTLVTDA--SITHVVSSN-TQSETFEWAEQENK--CL 375 (398)
Q Consensus 302 DVr~il~~~r~~vl~g~~i~fSg~~~~~~~-~l~~la~~lGa~~~~~~~~--~vTHlVa~~-~~t~K~~~A~~~gi--~I 375 (398)
+++.+|..+-...-=..+.++||....... .=.+....+|-.+..++++ .++|++|.+ ..|+|+..|...+- +|
T Consensus 7 ~a~~il~~~~~~~~~~i~ai~TGc~~~~~~~~D~~~Lr~LGI~Iv~d~~~~~~~n~LiAPkilRT~KFL~sLa~~P~~~i 86 (256)
T 3t7k_A 7 KAEKILARFNELPNYDLKAVCTGCFHDGFNEVDIEILNQLGIKIFDNIKETDKLNCIFAPKILRTEKFLKSLSFEPLKFA 86 (256)
T ss_dssp CHHHHHHTCSCCCCCCEEEEESSSCSSCCCHHHHHHHHHTTEEECSSCCGGGCCCEEECSSCCCBHHHHHHTTSTTCCEE
T ss_pred HHHHHHHhcccCCCeeEEEEecCCcccccCHHHHHHHHHcCeEEEecCcccCCCCEEEcCchhhHHHHHHHhccCccceE
Confidence 345555533222224566788887722222 2245678999999999964 799999997 78999999999864 59
Q ss_pred eChhHHHHHHHh---cC------cCCCCCCCC
Q 039039 376 VHPQWINDAYFL---WC------RQPNDVSFF 398 (398)
Q Consensus 376 V~~~WL~~c~~~---~~------r~~E~~Y~~ 398 (398)
|+|+||.+|+.. .+ .++.++|++
T Consensus 87 l~p~FI~~~Lk~ih~~~~~~~~~~l~~~dY~L 118 (256)
T 3t7k_A 87 LKPEFIIDLLKQIHSKKDKLSQININLFDYEI 118 (256)
T ss_dssp ECTHHHHHHHHHHC-------CCCCCSSTTBC
T ss_pred eCHHHHHHHHHHhhcCCcccccccCChhhccC
Confidence 999999999988 66 778888864
No 77
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=97.58 E-value=7.3e-05 Score=68.75 Aligned_cols=90 Identities=11% Similarity=-0.045 Sum_probs=66.2
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCC-Cc
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQE-SS 224 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~-~~ 224 (398)
..+.||+.++|+.+. ..+.++|.|++.+.++..+++.++..+..| +.+++.++... .+.+-+++++.++ +.
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 188 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTP-ASTVFATDVVRGRPFPDMALKVALELEVGHVNG 188 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCC-SEEECGGGSSSCTTSSHHHHHHHHHHTCSCGGG
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCC-ceEecHHhcCCCCCCHHHHHHHHHHcCCCCCcc
Confidence 468899999999995 559999999999999999999887665226 66777776543 2334455666778 99
Q ss_pred EEEEeCCcccccCCCCceE
Q 039039 225 IVIVDDTESVWGGRVENLI 243 (398)
Q Consensus 225 vvIiDD~~~vw~~~~~N~I 243 (398)
++.|+|+..-.......++
T Consensus 189 ~i~vGD~~~Di~~a~~aG~ 207 (277)
T 3iru_A 189 CIKVDDTLPGIEEGLRAGM 207 (277)
T ss_dssp EEEEESSHHHHHHHHHTTC
T ss_pred EEEEcCCHHHHHHHHHCCC
Confidence 9999999843333233443
No 78
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=97.56 E-value=2.1e-05 Score=72.78 Aligned_cols=87 Identities=13% Similarity=0.055 Sum_probs=63.6
Q ss_pred EeCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcEE
Q 039039 154 KLRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSIV 226 (398)
Q Consensus 154 klRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~vv 226 (398)
.+.||+.++|+.+ .+.+.+.+-|++ ..+..+++.++... +| +.+++.++... .+.+.+++++.+++.+|
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~--~~~~~~L~~~gl~~-~F-d~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l 191 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSAS--KNAINVLNHLGISD-KF-DFIADAGKCKNNKPHPEIFLMSAKGLNVNPQNCI 191 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHHTCGG-GC-SEECCGGGCCSCTTSSHHHHHHHHHHTCCGGGEE
T ss_pred ccchhHHHHHHHHHhccccccccccc--chhhhHhhhccccc-cc-ceeecccccCCCCCcHHHHHHHHHHhCCChHHeE
Confidence 4679999999999 466667665544 56788899988775 88 66887877653 35667778888899999
Q ss_pred EEeCCcccccCCCCceEE
Q 039039 227 IVDDTESVWGGRVENLIT 244 (398)
Q Consensus 227 IiDD~~~vw~~~~~N~I~ 244 (398)
+|+|++.-.......+++
T Consensus 192 ~VGDs~~Di~aA~~aG~~ 209 (250)
T 4gib_A 192 GIEDASAGIDAINSANMF 209 (250)
T ss_dssp EEESSHHHHHHHHHTTCE
T ss_pred EECCCHHHHHHHHHcCCE
Confidence 999998544333344443
No 79
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=97.55 E-value=6.3e-05 Score=75.01 Aligned_cols=133 Identities=19% Similarity=0.079 Sum_probs=84.1
Q ss_pred HHHHHHhhhcchhhhccCceEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEE
Q 039039 75 DEISRLKKRNTKNLLRMRKLHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVK 154 (398)
Q Consensus 75 ~~a~~~~~~~~~~ll~~~Kl~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vk 154 (398)
..|..+. .-...+..++...||+|+||||...... +. .. ....+... .. .-.
T Consensus 205 ~~a~~~~-~~~~~l~~~~iK~lv~DvDnTL~~G~l~------~d----------------G~---~~~~~~dg-~g-~g~ 256 (387)
T 3nvb_A 205 IISSRTI-DIIAAIQGKFKKCLILDLDNTIWGGVVG------DD----------------GW---ENIQVGHG-LG-IGK 256 (387)
T ss_dssp HHHHHHH-HHHHHHTTCCCCEEEECCBTTTBBSCHH------HH----------------CG---GGSBCSSS-SS-THH
T ss_pred HHHHHHH-HHHHHHHhCCCcEEEEcCCCCCCCCeec------CC----------------Cc---eeEEeccC-cc-ccc
Confidence 3344443 3355677788999999999999886530 00 00 00000000 00 012
Q ss_pred eCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHH-----hCCCCCccceeEEEccCCCCccccccccccCCCCcEEEE
Q 039039 155 LRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKL-----LDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIV 228 (398)
Q Consensus 155 lRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~-----LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIi 228 (398)
+-||+.++|+.+ ...+.+.|.|+..+.++..+++. ++..+ +| .-......-...+.+-+++++-+++.+++|
T Consensus 257 ~ypgv~e~L~~Lk~~Gi~laI~Snn~~~~v~~~l~~~~~~~l~l~~-~~-~v~~~~KPKp~~l~~al~~Lgl~pee~v~V 334 (387)
T 3nvb_A 257 AFTEFQEWVKKLKNRGIIIAVCSKNNEGKAKEPFERNPEMVLKLDD-IA-VFVANWENKADNIRTIQRTLNIGFDSMVFL 334 (387)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEESCHHHHHHHHHHCTTCSSCGGG-CS-EEEEESSCHHHHHHHHHHHHTCCGGGEEEE
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhccccccCccC-cc-EEEeCCCCcHHHHHHHHHHhCcCcccEEEE
Confidence 349999999999 56799999999999999999987 45554 55 222222222223455566677788999999
Q ss_pred eCCcccccC
Q 039039 229 DDTESVWGG 237 (398)
Q Consensus 229 DD~~~vw~~ 237 (398)
+|++.-...
T Consensus 335 GDs~~Di~a 343 (387)
T 3nvb_A 335 DDNPFERNM 343 (387)
T ss_dssp CSCHHHHHH
T ss_pred CCCHHHHHH
Confidence 999855543
No 80
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=97.54 E-value=0.00015 Score=65.45 Aligned_cols=89 Identities=12% Similarity=-0.004 Sum_probs=61.8
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccc-eeEEEccCCCC------ccccccccccCCCCc
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFN-SRIITREDFKQ------KERKCLDLVLGQESS 224 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~-~ri~srd~~~~------~~~K~L~~l~~~~~~ 224 (398)
..+.||+.++|+.+. ..+.++|.|++.+.++..+++. +-.. +|. +.+++.++... .+.+-+++++.+++.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~-~f~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~ 184 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPG-IFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNE 184 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTT-TCCGGGEECGGGCSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHH-hcCCCeEEecccCCCCCCCCHHHHHHHHHcCCChhh
Confidence 567899999999995 5699999999999999999987 5554 774 45676766543 134445566678899
Q ss_pred EEEEeCCcccccCCCCceE
Q 039039 225 IVIVDDTESVWGGRVENLI 243 (398)
Q Consensus 225 vvIiDD~~~vw~~~~~N~I 243 (398)
++.|+|+..-.......++
T Consensus 185 ~i~vGD~~~Di~~a~~aG~ 203 (247)
T 3dv9_A 185 ALVIENAPLGVQAGVAAGI 203 (247)
T ss_dssp EEEEECSHHHHHHHHHTTS
T ss_pred eEEEeCCHHHHHHHHHCCC
Confidence 9999999844433233343
No 81
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=97.54 E-value=4.1e-05 Score=69.12 Aligned_cols=81 Identities=9% Similarity=-0.049 Sum_probs=57.2
Q ss_pred EeCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccC----------CCC-----cccccccc
Q 039039 154 KLRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITRED----------FKQ-----KERKCLDL 217 (398)
Q Consensus 154 klRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~----------~~~-----~~~K~L~~ 217 (398)
.++||+.++|+.+ .+.+.++|.|++.+.+++.+++.++... +|+..+...+. +.. ...+-+..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~ 170 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH-LIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAG 170 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE-EEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-EEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHH
Confidence 4699999999999 5679999999999999999999998764 66655443222 110 00111223
Q ss_pred cc---CCCCcEEEEeCCcccc
Q 039039 218 VL---GQESSIVIVDDTESVW 235 (398)
Q Consensus 218 l~---~~~~~vvIiDD~~~vw 235 (398)
++ .+++.+++|.|+..-.
T Consensus 171 ~~~~~~~~~~~~~vGDs~~D~ 191 (232)
T 3fvv_A 171 MGLALGDFAESYFYSDSVNDV 191 (232)
T ss_dssp TTCCGGGSSEEEEEECCGGGH
T ss_pred cCCCcCchhheEEEeCCHhhH
Confidence 34 4678899999998433
No 82
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=97.48 E-value=0.00016 Score=65.60 Aligned_cols=89 Identities=12% Similarity=0.005 Sum_probs=64.8
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccc-eeEEEccCCCC------ccccccccccCCCCc
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFN-SRIITREDFKQ------KERKCLDLVLGQESS 224 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~-~ri~srd~~~~------~~~K~L~~l~~~~~~ 224 (398)
..+.||+.++|+.+. ..+.++|.|++.+.++..+++. +... +|. +.+++.++... .+.+-+++++.+++.
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~-~f~~d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~ 185 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPG-MFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADE 185 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTT-TCCGGGEECTTTCSSCTTSSHHHHHHHHHTTCCGGG
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHH-hcCcceEEeHHhCCCCCCChHHHHHHHHHcCCCHHH
Confidence 467899999999995 5599999999999999998887 5554 773 44676666543 234455666678899
Q ss_pred EEEEeCCcccccCCCCceE
Q 039039 225 IVIVDDTESVWGGRVENLI 243 (398)
Q Consensus 225 vvIiDD~~~vw~~~~~N~I 243 (398)
++.|+|++.-.......++
T Consensus 186 ~i~vGD~~~Di~~a~~aG~ 204 (243)
T 3qxg_A 186 AVVIENAPLGVEAGHKAGI 204 (243)
T ss_dssp EEEEECSHHHHHHHHHTTC
T ss_pred eEEEeCCHHHHHHHHHCCC
Confidence 9999999844433233444
No 83
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=97.41 E-value=0.00031 Score=64.08 Aligned_cols=149 Identities=10% Similarity=0.051 Sum_probs=87.5
Q ss_pred eEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEEeCccHHHHHHHh-hccccE
Q 039039 94 LHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEA-SRLFEI 172 (398)
Q Consensus 94 l~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vklRPgl~eFL~~~-s~~yEi 172 (398)
..+||||||||+++...- .. .... .....+++++ +|+.+ ...+.+
T Consensus 50 k~viFDlDGTL~Ds~~~~--~~----------------------~~~~--------~~~~~~~d~~--~L~~L~~~G~~l 95 (211)
T 3ij5_A 50 RLLICDVDGVMSDGLIYM--GN----------------------QGEE--------LKAFNVRDGY--GIRCLITSDIDV 95 (211)
T ss_dssp SEEEECCTTTTSSSEEEE--ET----------------------TSCE--------EEEEEHHHHH--HHHHHHHTTCEE
T ss_pred CEEEEeCCCCEECCHHHH--hh----------------------hhHH--------HHHhccchHH--HHHHHHHCCCEE
Confidence 478999999999987420 00 0000 1122345555 88888 567999
Q ss_pred EEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEeCCcccccCCCCceEEeCcccccc
Q 039039 173 SVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVDDTESVWGGRVENLITVGSYDFFK 252 (398)
Q Consensus 173 ~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiDD~~~vw~~~~~N~I~I~~y~ff~ 252 (398)
.|.|+..+..|..+++.++... +|... ..-.....+-++++..+++.++.|.|+..=...-...++.+.+-.
T Consensus 96 ~I~T~~~~~~~~~~l~~lgi~~-~f~~~----k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~--- 167 (211)
T 3ij5_A 96 AIITGRRAKLLEDRANTLGITH-LYQGQ----SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVAD--- 167 (211)
T ss_dssp EEECSSCCHHHHHHHHHHTCCE-EECSC----SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTT---
T ss_pred EEEeCCCHHHHHHHHHHcCCch-hhccc----CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCC---
Confidence 9999999999999999998764 55331 100111223334455578899999999855544345666665432
Q ss_pred CCCCCCCccccccccCCCcchHHHHHHHHHHHHH
Q 039039 253 GKKKNDCKSYSEQMSDESESDGALANILRALKAV 286 (398)
Q Consensus 253 ~~~~~~~~sl~~~~~d~~~~D~~L~~l~~~L~~i 286 (398)
+.-..+..+...-.....++.+..+.+.|...
T Consensus 168 --~~~~~~~~Ad~v~~~~~~~G~v~e~~~~ll~~ 199 (211)
T 3ij5_A 168 --AHPLLLPKAHYVTRIKGGRGAVREVCDLILLA 199 (211)
T ss_dssp --SCTTTGGGSSEECSSCTTTTHHHHHHHHHHHH
T ss_pred --ccHHHHhhCCEEEeCCCCCcHHHHHHHHHHHH
Confidence 10001111111112334556677777776653
No 84
>3al2_A DNA topoisomerase 2-binding protein 1; BRCT domain, protein binding, DNA binding protein; HET: DNA MSE; 2.00A {Homo sapiens} PDB: 3al3_A*
Probab=97.39 E-value=7.8e-05 Score=69.44 Aligned_cols=86 Identities=13% Similarity=0.041 Sum_probs=64.1
Q ss_pred eecccceeEEecCCCCCCchhhHHHHHHhCCEEeeecC----CCccEEEECCCC------CHHHHHHHhCCCeeeChhHH
Q 039039 312 SRILMGCTILFGDDDFEELPLTWSRAEEMGAICTLVTD----ASITHVVSSNTQ------SETFEWAEQENKCLVHPQWI 381 (398)
Q Consensus 312 ~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~~~~~----~~vTHlVa~~~~------t~K~~~A~~~gi~IV~~~WL 381 (398)
..+|+|++++|.+- +.....+.++++..||+|..... ...||.+....+ ..+++.+.+.|++||+++||
T Consensus 133 ~~lF~g~~v~l~~~-~~~~~~l~~ii~agGg~vl~~~~~~~~~~~t~~~vd~~~~~~~~~~~~~~~~~~~~i~~v~~ewl 211 (235)
T 3al2_A 133 EGAFSGWKVILHVD-QSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDLNKLKPDDSGVNIAEAAAQNVYCLRTEYI 211 (235)
T ss_dssp SSTTTTCEEEEECC-HHHHHHHHHHHHHTTCEECSSCCGGGGGGCSEEEECC--------CCCHHHHHHTTCEEEETHHH
T ss_pred CCCCCCcEEEEecC-CCcHHHHHHHHHcCCcEEecCCCCCccccCceEEEecccCCccchhHHHHHHHHcCCcEEcHHHH
Confidence 58999999988874 22234789999999999976543 246898775321 13566777889999999999
Q ss_pred HHHHHhcCcCCCCCCCC
Q 039039 382 NDAYFLWCRQPNDVSFF 398 (398)
Q Consensus 382 ~~c~~~~~r~~E~~Y~~ 398 (398)
.+|+.+.+..+.+.|.+
T Consensus 212 ld~i~~~~~~~~~~y~l 228 (235)
T 3al2_A 212 ADYLMQESPPHVENYCL 228 (235)
T ss_dssp HHHHHCSSCCCHHHHBC
T ss_pred HHHHhcCCCCChhheEc
Confidence 99999887777666643
No 85
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=97.36 E-value=0.00026 Score=64.00 Aligned_cols=77 Identities=13% Similarity=-0.000 Sum_probs=54.3
Q ss_pred EeCccHHHHHHHh-hccccEEEEcCCcH---------------HHHHHHHHHhCCCCCccceeEEEc-----------cC
Q 039039 154 KLRPFVRSFLEEA-SRLFEISVCTMGNR---------------EYATRAVKLLDPDCKYFNSRIITR-----------ED 206 (398)
Q Consensus 154 klRPgl~eFL~~~-s~~yEi~I~T~g~~---------------~YA~~il~~LDP~~~~F~~ri~sr-----------d~ 206 (398)
.+.||+.++|+++ .+.+.++|.|++.+ .++..+++.++-. |..-+.+. ++
T Consensus 56 ~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---~~~~~~~~~~~~g~~~~~~~~ 132 (218)
T 2o2x_A 56 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF---VDMVLACAYHEAGVGPLAIPD 132 (218)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC---CSEEEEECCCTTCCSTTCCSS
T ss_pred eECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc---eeeEEEeecCCCCceeecccC
Confidence 5679999999999 46799999999998 7888888887642 42322232 33
Q ss_pred CCC------ccccccccccCCCCcEEEEeCCcc
Q 039039 207 FKQ------KERKCLDLVLGQESSIVIVDDTES 233 (398)
Q Consensus 207 ~~~------~~~K~L~~l~~~~~~vvIiDD~~~ 233 (398)
+.. .+.+-++++..+++.+++|.|+..
T Consensus 133 ~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~ 165 (218)
T 2o2x_A 133 HPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLA 165 (218)
T ss_dssp CTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHH
T ss_pred CccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHH
Confidence 221 233334555667889999999983
No 86
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=97.34 E-value=1.4e-05 Score=70.41 Aligned_cols=94 Identities=20% Similarity=0.075 Sum_probs=64.2
Q ss_pred EEEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHH-hCCCCCccceeEEEccCCCC------ccccccccccCCCC
Q 039039 152 LVKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKL-LDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQES 223 (398)
Q Consensus 152 ~vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~-LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~ 223 (398)
++.+.||+.++|+.+. +.+.++|.|++.+.++..++.. ++.. .+| +.+++.++... .+.+-+++++.+++
T Consensus 89 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~-~~f-~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 166 (206)
T 2b0c_A 89 FVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR-DAA-DHIYLSQDLGMRKPEARIYQHVLQAEGFSPS 166 (206)
T ss_dssp EEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH-HHC-SEEEEHHHHTCCTTCHHHHHHHHHHHTCCGG
T ss_pred hcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChh-hhe-eeEEEecccCCCCCCHHHHHHHHHHcCCCHH
Confidence 4688999999999995 7899999999998887665544 3322 256 45666655432 23344555666788
Q ss_pred cEEEEeCCcccccCCCCceEEeCc
Q 039039 224 SIVIVDDTESVWGGRVENLITVGS 247 (398)
Q Consensus 224 ~vvIiDD~~~vw~~~~~N~I~I~~ 247 (398)
.+++|+|++.-.......++.+.-
T Consensus 167 ~~~~vgD~~~Di~~a~~aG~~~~~ 190 (206)
T 2b0c_A 167 DTVFFDDNADNIEGANQLGITSIL 190 (206)
T ss_dssp GEEEEESCHHHHHHHHTTTCEEEE
T ss_pred HeEEeCCCHHHHHHHHHcCCeEEE
Confidence 999999998644333445555433
No 87
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=97.33 E-value=4.9e-05 Score=65.45 Aligned_cols=87 Identities=11% Similarity=-0.068 Sum_probs=58.6
Q ss_pred EeCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEeCCc
Q 039039 154 KLRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVDDTE 232 (398)
Q Consensus 154 klRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiDD~~ 232 (398)
..++++ .|+.+ +..+.++|.|++.+.+++.+++.++-.. +|... ......+.+-++++..+++.+++|.|+.
T Consensus 33 ~~~~~~--~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~~~~~----kpk~~~~~~~~~~~~~~~~~~~~vGD~~ 105 (164)
T 3e8m_A 33 NTSDSA--GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY-LFQGV----VDKLSAAEELCNELGINLEQVAYIGDDL 105 (164)
T ss_dssp EGGGHH--HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE-EECSC----SCHHHHHHHHHHHHTCCGGGEEEECCSG
T ss_pred cCChHH--HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE-eeccc----CChHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 344443 78888 4679999999999999999999987664 45321 1111123334455556788999999999
Q ss_pred ccccCCCCceEEeCc
Q 039039 233 SVWGGRVENLITVGS 247 (398)
Q Consensus 233 ~vw~~~~~N~I~I~~ 247 (398)
.-.......++.+..
T Consensus 106 ~Di~~~~~ag~~~~~ 120 (164)
T 3e8m_A 106 NDAKLLKRVGIAGVP 120 (164)
T ss_dssp GGHHHHTTSSEEECC
T ss_pred HHHHHHHHCCCeEEc
Confidence 555444556776654
No 88
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=97.32 E-value=2.5e-05 Score=69.36 Aligned_cols=67 Identities=10% Similarity=0.092 Sum_probs=47.9
Q ss_pred EEeCccHHHHHHHhhc--cccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEeC
Q 039039 153 VKLRPFVRSFLEEASR--LFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVDD 230 (398)
Q Consensus 153 vklRPgl~eFL~~~s~--~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiDD 230 (398)
+.+.||+.++|+++.+ .+.++|.|++.+.++..+++.++. | +.+++.+ -++++...++.+++|.|
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl----f-~~i~~~~--------~~~~~~~~~~~~~~vgD 138 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW----V-EQHLGPQ--------FVERIILTRDKTVVLGD 138 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH----H-HHHHCHH--------HHTTEEECSCGGGBCCS
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc----h-hhhcCHH--------HHHHcCCCcccEEEECC
Confidence 4678999999999965 699999999999999999888754 5 3344332 23444445566666544
Q ss_pred Cc
Q 039039 231 TE 232 (398)
Q Consensus 231 ~~ 232 (398)
+.
T Consensus 139 s~ 140 (193)
T 2i7d_A 139 LL 140 (193)
T ss_dssp EE
T ss_pred ch
Confidence 43
No 89
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=97.31 E-value=0.00015 Score=72.51 Aligned_cols=93 Identities=15% Similarity=0.039 Sum_probs=64.0
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEE------Ecc---CCCC------ccccccc
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRII------TRE---DFKQ------KERKCLD 216 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~------srd---~~~~------~~~K~L~ 216 (398)
+.++||+.++|+.+. ..|.++|.|++.+.+++.+++.++.+. +|.+.+- +.. +... .+.+-++
T Consensus 255 ~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~-~~~~~l~~~dg~~tg~~~~~v~~~kpk~~~~~~~~~ 333 (415)
T 3p96_A 255 LELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDY-VAANELEIVDGTLTGRVVGPIIDRAGKATALREFAQ 333 (415)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSE-EEEECEEEETTEEEEEECSSCCCHHHHHHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccc-eeeeeEEEeCCEEEeeEccCCCCCcchHHHHHHHHH
Confidence 478999999999995 569999999999999999999998764 6654331 111 1111 1223334
Q ss_pred cccCCCCcEEEEeCCcccccCCCCceEEeC
Q 039039 217 LVLGQESSIVIVDDTESVWGGRVENLITVG 246 (398)
Q Consensus 217 ~l~~~~~~vvIiDD~~~vw~~~~~N~I~I~ 246 (398)
+++.+++.++.|+|+..-.......++.+.
T Consensus 334 ~~gi~~~~~i~vGD~~~Di~~a~~aG~~va 363 (415)
T 3p96_A 334 RAGVPMAQTVAVGDGANDIDMLAAAGLGIA 363 (415)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred HcCcChhhEEEEECCHHHHHHHHHCCCeEE
Confidence 455578899999999854433334455553
No 90
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=97.28 E-value=0.00022 Score=63.44 Aligned_cols=115 Identities=13% Similarity=-0.019 Sum_probs=72.3
Q ss_pred ceEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEEeCccHHHHHHHh-hcccc
Q 039039 93 KLHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEA-SRLFE 171 (398)
Q Consensus 93 Kl~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vklRPgl~eFL~~~-s~~yE 171 (398)
-..++||+||||+++...- .. .... ...+.++++. +|+.+ ...+.
T Consensus 19 ik~vifD~DGTL~d~~~~~--~~----------------------~~~~--------~~~~~~~~~~--~l~~L~~~g~~ 64 (189)
T 3mn1_A 19 IKLAVFDVDGVLTDGRLYF--ME----------------------DGSE--------IKTFNTLDGQ--GIKMLIASGVT 64 (189)
T ss_dssp CCEEEECSTTTTSCSEEEE--ET----------------------TSCE--------EEEEEHHHHH--HHHHHHHTTCE
T ss_pred CCEEEEcCCCCcCCccEee--cc----------------------CCcE--------eeeeccccHH--HHHHHHHCCCE
Confidence 3478999999999986420 00 0000 1223445554 88888 46799
Q ss_pred EEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEeCCcccccCCCCceEEeC
Q 039039 172 ISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVDDTESVWGGRVENLITVG 246 (398)
Q Consensus 172 i~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiDD~~~vw~~~~~N~I~I~ 246 (398)
++|.|++.+..++.+++.++... +|... ..-.....+-+++++.+++.++.|.|+..-.......++.+.
T Consensus 65 ~~i~T~~~~~~~~~~~~~lgl~~-~f~~~----~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~ 134 (189)
T 3mn1_A 65 TAIISGRKTAIVERRAKSLGIEH-LFQGR----EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMA 134 (189)
T ss_dssp EEEECSSCCHHHHHHHHHHTCSE-EECSC----SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred EEEEECcChHHHHHHHHHcCCHH-HhcCc----CChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEE
Confidence 99999999999999999998764 55331 000011222334455578899999999854433333455553
No 91
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=97.20 E-value=0.0003 Score=61.88 Aligned_cols=114 Identities=7% Similarity=-0.006 Sum_probs=74.1
Q ss_pred eEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEEeCccHHHHHHHh-hccccE
Q 039039 94 LHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEA-SRLFEI 172 (398)
Q Consensus 94 l~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vklRPgl~eFL~~~-s~~yEi 172 (398)
..+++|+||||+++... +. + .....-.+.|...+.|+++ .+.+.+
T Consensus 9 k~i~~DlDGTL~~~~~~--~~---------------------~-----------~~~~~~~~~~~~~~~l~~L~~~G~~~ 54 (180)
T 1k1e_A 9 KFVITDVDGVLTDGQLH--YD---------------------A-----------NGEAIKSFHVRDGLGIKMLMDADIQV 54 (180)
T ss_dssp CEEEEECTTTTSCSEEE--EE---------------------T-----------TEEEEEEEEHHHHHHHHHHHHTTCEE
T ss_pred eEEEEeCCCCcCCCCee--ec---------------------c-----------CcceeeeeccchHHHHHHHHHCCCeE
Confidence 47899999999987531 00 0 0123334678888999999 567999
Q ss_pred EEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEeCCcccccCCCCceEEeC
Q 039039 173 SVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVDDTESVWGGRVENLITVG 246 (398)
Q Consensus 173 ~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiDD~~~vw~~~~~N~I~I~ 246 (398)
+|.|+..+.++..+++.++... +|... ..-.....+-++.+.-+++.++.|.|+..-.......++.+.
T Consensus 55 ~i~Tg~~~~~~~~~~~~lgl~~-~~~~~----k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~ 123 (180)
T 1k1e_A 55 AVLSGRDSPILRRRIADLGIKL-FFLGK----LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFA 123 (180)
T ss_dssp EEEESCCCHHHHHHHHHHTCCE-EEESC----SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred EEEeCCCcHHHHHHHHHcCCce-eecCC----CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEE
Confidence 9999999999999999998764 45220 000001122233445567889999999854433233455554
No 92
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=97.18 E-value=2.5e-05 Score=69.67 Aligned_cols=45 Identities=16% Similarity=0.144 Sum_probs=36.8
Q ss_pred EEeCccHHHHHHHhhc--cccEEEEcCCcHHHHHHHHHHhCCCCCcc
Q 039039 153 VKLRPFVRSFLEEASR--LFEISVCTMGNREYATRAVKLLDPDCKYF 197 (398)
Q Consensus 153 vklRPgl~eFL~~~s~--~yEi~I~T~g~~~YA~~il~~LDP~~~~F 197 (398)
+.+.||+.++|+.+.+ .+.+.|.|++.+.++..+++.++-..++|
T Consensus 74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f 120 (197)
T 1q92_A 74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYF 120 (197)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhc
Confidence 5688999999999965 69999999999998888887765443355
No 93
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=97.14 E-value=0.00022 Score=62.64 Aligned_cols=82 Identities=15% Similarity=0.161 Sum_probs=57.4
Q ss_pred EeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCC-CCccceeEEEccC-C------C----Cccccccccc-c
Q 039039 154 KLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPD-CKYFNSRIITRED-F------K----QKERKCLDLV-L 219 (398)
Q Consensus 154 klRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~-~~~F~~ri~srd~-~------~----~~~~K~L~~l-~ 219 (398)
.++||+.++|+.+. ..+.++|.|++.+.++..+++.++-. ..+|...+....+ . . ....+.+... .
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 161 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDKAKG 161 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHHHGG
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHHHhC
Confidence 37899999999995 56999999999999999999998764 2356444432222 1 0 0123334333 4
Q ss_pred CCCCcEEEEeCCcccc
Q 039039 220 GQESSIVIVDDTESVW 235 (398)
Q Consensus 220 ~~~~~vvIiDD~~~vw 235 (398)
-+++.++.|.|+..-.
T Consensus 162 ~~~~~~~~vGD~~~Di 177 (219)
T 3kd3_A 162 LIDGEVIAIGDGYTDY 177 (219)
T ss_dssp GCCSEEEEEESSHHHH
T ss_pred CCCCCEEEEECCHhHH
Confidence 4788999999998533
No 94
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=97.12 E-value=0.00012 Score=65.98 Aligned_cols=114 Identities=11% Similarity=0.063 Sum_probs=66.2
Q ss_pred HHHh-hccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEeCCcccccCCCCc
Q 039039 163 LEEA-SRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVDDTESVWGGRVEN 241 (398)
Q Consensus 163 L~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiDD~~~vw~~~~~N 241 (398)
|+.+ ...+.+.|.|++.+..+..+++.++... +|... ..-.....+-++++..+++.++.|.|+..-...-...
T Consensus 61 l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~-~~~~~----k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~a 135 (195)
T 3n07_A 61 VKALMNAGIEIAIITGRRSQIVENRMKALGISL-IYQGQ----DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKV 135 (195)
T ss_dssp HHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE-EECSC----SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTS
T ss_pred HHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE-EeeCC----CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHC
Confidence 7887 5679999999999999999999998664 44221 1000111222344455778999999998555443445
Q ss_pred eEEeCccccccCCCCCCCccccccccCCCcchHHHHHHHHHHHHH
Q 039039 242 LITVGSYDFFKGKKKNDCKSYSEQMSDESESDGALANILRALKAV 286 (398)
Q Consensus 242 ~I~I~~y~ff~~~~~~~~~sl~~~~~d~~~~D~~L~~l~~~L~~i 286 (398)
++.+.+-. +.-..+..+...-+....++.+..+.+.|.+.
T Consensus 136 g~~va~~n-----a~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~ 175 (195)
T 3n07_A 136 ALRVCVAD-----GHPLLAQRANYVTHIKGGHGAVREVCDLILQA 175 (195)
T ss_dssp SEEEECTT-----SCHHHHHHCSEECSSCTTTTHHHHHHHHHHHH
T ss_pred CCEEEECC-----hHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHh
Confidence 66654322 10000011111122344566677777776654
No 95
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=97.11 E-value=0.00038 Score=61.18 Aligned_cols=83 Identities=4% Similarity=-0.135 Sum_probs=53.7
Q ss_pred eCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEeCCcc
Q 039039 155 LRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVDDTES 233 (398)
Q Consensus 155 lRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiDD~~~ 233 (398)
+++++ +|+.+ .+.+.++|.|++.+.++..+++.++.. +|... ..-.....+-++++..+++.++.|.|+..
T Consensus 42 ~~~~~--~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~--~~~~~----~~k~~~l~~~~~~~~~~~~~~~~vGD~~n 113 (176)
T 3mmz_A 42 RGDGL--GIAALRKSGLTMLILSTEQNPVVAARARKLKIP--VLHGI----DRKDLALKQWCEEQGIAPERVLYVGNDVN 113 (176)
T ss_dssp HHHHH--HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC--EEESC----SCHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred cccHH--HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe--eEeCC----CChHHHHHHHHHHcCCCHHHEEEEcCCHH
Confidence 44554 78888 567999999999999999999999876 44221 11011122333445557788999999984
Q ss_pred cccCCCCceEEe
Q 039039 234 VWGGRVENLITV 245 (398)
Q Consensus 234 vw~~~~~N~I~I 245 (398)
=...-...++.+
T Consensus 114 D~~~~~~ag~~v 125 (176)
T 3mmz_A 114 DLPCFALVGWPV 125 (176)
T ss_dssp GHHHHHHSSEEE
T ss_pred HHHHHHHCCCeE
Confidence 333222334444
No 96
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=97.06 E-value=0.0023 Score=58.88 Aligned_cols=84 Identities=19% Similarity=0.188 Sum_probs=56.0
Q ss_pred EeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEeCCc
Q 039039 154 KLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVDDTE 232 (398)
Q Consensus 154 klRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiDD~~ 232 (398)
.++||+.++|+.+. ..+.+.|.|++.+.++..+++.++... +| ..+++.+.. ...|.+. +.-.++.|.|+.
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~f-~~~~~~~k~--~~~k~~~----~~~~~~~vGD~~ 215 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDD-YF-AEVLPHEKA--EKVKEVQ----QKYVTAMVGDGV 215 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-EE-CSCCGGGHH--HHHHHHH----TTSCEEEEECTT
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChh-Hh-HhcCHHHHH--HHHHHHH----hcCCEEEEeCCc
Confidence 79999999999995 579999999999999999999998764 56 233322211 1122221 222678998887
Q ss_pred ccccCCCCceEEe
Q 039039 233 SVWGGRVENLITV 245 (398)
Q Consensus 233 ~vw~~~~~N~I~I 245 (398)
.=...-...++.|
T Consensus 216 nDi~~~~~Ag~~v 228 (280)
T 3skx_A 216 NDAPALAQADVGI 228 (280)
T ss_dssp TTHHHHHHSSEEE
T ss_pred hhHHHHHhCCceE
Confidence 4333222344544
No 97
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=97.01 E-value=0.00014 Score=64.88 Aligned_cols=114 Identities=8% Similarity=0.073 Sum_probs=66.2
Q ss_pred HHHHh-hccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEeCCcccccCCCC
Q 039039 162 FLEEA-SRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVDDTESVWGGRVE 240 (398)
Q Consensus 162 FL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiDD~~~vw~~~~~ 240 (398)
-|+.+ ...+.++|.|++++..+..+++.++-.. +|... ......+.+-++++..+++.++.|.|+..-......
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~-~~~~~----kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ 128 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH-YYKGQ----VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQ 128 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-EECSC----SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-ceeCC----CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH
Confidence 37888 4679999999999999999999997664 44221 111112233344555678899999999854443334
Q ss_pred ceEEeCccccccCCCCCCCccccccccCCCcchHHHHHHHHHHHH
Q 039039 241 NLITVGSYDFFKGKKKNDCKSYSEQMSDESESDGALANILRALKA 285 (398)
Q Consensus 241 N~I~I~~y~ff~~~~~~~~~sl~~~~~d~~~~D~~L~~l~~~L~~ 285 (398)
.++.+..-. +.-..+..+...-+....++.+..+.++|..
T Consensus 129 ag~~~~~~~-----~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~ 168 (191)
T 3n1u_A 129 VGLGVAVSN-----AVPQVLEFADWRTERTGGRGAVRELCDLILN 168 (191)
T ss_dssp SSEEEECTT-----CCHHHHHHSSEECSSCTTTTHHHHHHHHHHH
T ss_pred CCCEEEeCC-----ccHHHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 566653221 1000001111111234456667777777654
No 98
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=96.95 E-value=0.00093 Score=58.44 Aligned_cols=92 Identities=15% Similarity=0.113 Sum_probs=59.9
Q ss_pred EEeCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccC----------CCC-----ccccccc
Q 039039 153 VKLRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITRED----------FKQ-----KERKCLD 216 (398)
Q Consensus 153 vklRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~----------~~~-----~~~K~L~ 216 (398)
..+.|++.++|+.+ .+.+.++|+|.+...++..+++.++... +|...+...+. +.. ...+-++
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~ 153 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY-AFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAK 153 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCe-EEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHH
Confidence 35689999999999 4679999999999999999999887654 56443332221 100 0111123
Q ss_pred cccCCCCcEEEEeCCcccccCCCCceEEe
Q 039039 217 LVLGQESSIVIVDDTESVWGGRVENLITV 245 (398)
Q Consensus 217 ~l~~~~~~vvIiDD~~~vw~~~~~N~I~I 245 (398)
+++.+++.++.|.|+..=.......++.+
T Consensus 154 ~lgi~~~~~~~iGD~~~Di~~~~~ag~~~ 182 (211)
T 1l7m_A 154 IEGINLEDTVAVGDGANDISMFKKAGLKI 182 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHCSEEE
T ss_pred HcCCCHHHEEEEecChhHHHHHHHCCCEE
Confidence 34456788999999985443323345544
No 99
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=96.93 E-value=0.0032 Score=59.33 Aligned_cols=123 Identities=14% Similarity=0.078 Sum_probs=70.8
Q ss_pred cCceEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEEeCccHHHHHHHh-hcc
Q 039039 91 MRKLHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEA-SRL 169 (398)
Q Consensus 91 ~~Kl~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vklRPgl~eFL~~~-s~~ 169 (398)
.+|..+|||+||||+..... ..........|..+. ...|. . .-...+.||+.+||+.+ +..
T Consensus 56 g~~~avVfDIDgTlldn~~y---------~~~~~~~~~~f~~~~----w~~wv--~---~g~~~~~pg~~ell~~L~~~G 117 (260)
T 3pct_A 56 GKKKAVVVDLDETMIDNSAY---------AGWQVQSGQGFSPKT----WTKWV--D---ARQSAAIPGAVEFSNYVNANG 117 (260)
T ss_dssp --CEEEEECCBTTTEECHHH---------HHHHHHHTCCCCHHH----HHHHH--H---TTCCEECTTHHHHHHHHHHTT
T ss_pred CCCCEEEEECCccCcCChhH---------HHhhcccCCCCCHHH----HHHHH--H---cCCCCCCccHHHHHHHHHHCC
Confidence 35569999999999999741 111111112221100 00000 0 01246789999999999 678
Q ss_pred ccEEEEcCCc----HHHHHHHHHHhCCCCCccceeEEEccCCCCcccccc--ccccC-CCCcEEEEeCCcccc
Q 039039 170 FEISVCTMGN----REYATRAVKLLDPDCKYFNSRIITREDFKQKERKCL--DLVLG-QESSIVIVDDTESVW 235 (398)
Q Consensus 170 yEi~I~T~g~----~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L--~~l~~-~~~~vvIiDD~~~vw 235 (398)
++|+|-|+-. +.-+..-++.++-.. ++...++-|..... |.- ..|.. +.+.++.|.|...=+
T Consensus 118 ~~i~ivTgR~~~~~r~~T~~~L~~lGi~~-~~~~~Lilr~~~~~---K~~~r~~L~~~gy~iv~~iGD~~~Dl 186 (260)
T 3pct_A 118 GTMFFVSNRRDDVEKAGTVDDMKRLGFTG-VNDKTLLLKKDKSN---KSVRFKQVEDMGYDIVLFVGDNLNDF 186 (260)
T ss_dssp CEEEEEEEEETTTSHHHHHHHHHHHTCCC-CSTTTEEEESSCSS---SHHHHHHHHTTTCEEEEEEESSGGGG
T ss_pred CeEEEEeCCCccccHHHHHHHHHHcCcCc-cccceeEecCCCCC---hHHHHHHHHhcCCCEEEEECCChHHc
Confidence 9999999875 457777788887654 44334555654322 221 11222 456688888876444
No 100
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=96.91 E-value=0.0008 Score=64.74 Aligned_cols=55 Identities=11% Similarity=0.076 Sum_probs=47.5
Q ss_pred hhhHHHHHHhCCEEeeec-CCCccEEEECCCC----CHHHHHHHhCCCeeeChhHHHHHHH
Q 039039 331 PLTWSRAEEMGAICTLVT-DASITHVVSSNTQ----SETFEWAEQENKCLVHPQWINDAYF 386 (398)
Q Consensus 331 ~~l~~la~~lGa~~~~~~-~~~vTHlVa~~~~----t~K~~~A~~~gi~IV~~~WL~~c~~ 386 (398)
..+...++++|+.+. ++ .+.|||||..+.. |.|..+|.-.|++||+++||.+...
T Consensus 127 ~~L~~~L~~LGik~v-~~~~detTHlVm~krnT~KvTvK~L~ALI~gkPIV~~~Fl~al~~ 186 (325)
T 3huf_A 127 SQWASNLNLLGIPTG-LRDSDATTHFVMNRQAGSSITVGTMYAFLKKTVIIDDSYLQYLST 186 (325)
T ss_dssp HHHHHHHHTTTCCEE-SSCCTTCCEEECCCCCSSCCCHHHHHHHHTTCEEECHHHHHHHTT
T ss_pred HHHHHHHHHcCCEEE-EccCCCEEEEEEeccccccchHHHHHHHHCCCcEecHHHHHHHHH
Confidence 368899999999999 88 6779999997644 4559999999999999999999754
No 101
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=96.91 E-value=0.0023 Score=56.50 Aligned_cols=81 Identities=11% Similarity=0.032 Sum_probs=53.4
Q ss_pred HHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEeCCcccccCCC
Q 039039 161 SFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVDDTESVWGGRV 239 (398)
Q Consensus 161 eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiDD~~~vw~~~~ 239 (398)
.+|+.+. ..+.++|.|++++..+..+++.++... +|.. ...-...+.+-+++++.+++.++.|+|+..-.....
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~-~~~~----~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~ 134 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH-LYQG----QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVME 134 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE-EECS----CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHT
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce-eecC----CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHH
Confidence 3888884 569999999999999999999987653 4422 111111122233444556788999999985444334
Q ss_pred CceEEeC
Q 039039 240 ENLITVG 246 (398)
Q Consensus 240 ~N~I~I~ 246 (398)
..++.+.
T Consensus 135 ~ag~~~~ 141 (188)
T 2r8e_A 135 KVGLSVA 141 (188)
T ss_dssp TSSEEEE
T ss_pred HCCCEEE
Confidence 5566664
No 102
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=96.91 E-value=0.0002 Score=62.37 Aligned_cols=88 Identities=15% Similarity=0.115 Sum_probs=58.5
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCC-------CccccccccccCCCCc
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFK-------QKERKCLDLVLGQESS 224 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~-------~~~~K~L~~l~~~~~~ 224 (398)
+.++||+.++|+.+. ..+.++|.|++.+.++..+ +.++... +| +.+.+.+... ......+..+ +++.
T Consensus 78 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~k~~~l~~l--~~~~ 152 (201)
T 4ap9_A 78 VNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEF-MA-NRAIFEDGKFQGIRLRFRDKGEFLKRF--RDGF 152 (201)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEE-EE-EEEEEETTEEEEEECCSSCHHHHHGGG--TTSC
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchh-he-eeEEeeCCceECCcCCccCHHHHHHhc--CcCc
Confidence 378999999999995 5599999999999999988 8877654 44 4444333211 1111233444 7788
Q ss_pred EEEEeCCcccccCCCCceEEe
Q 039039 225 IVIVDDTESVWGGRVENLITV 245 (398)
Q Consensus 225 vvIiDD~~~vw~~~~~N~I~I 245 (398)
++.|.|+..-.......++.|
T Consensus 153 ~i~iGD~~~Di~~~~~ag~~v 173 (201)
T 4ap9_A 153 ILAMGDGYADAKMFERADMGI 173 (201)
T ss_dssp EEEEECTTCCHHHHHHCSEEE
T ss_pred EEEEeCCHHHHHHHHhCCceE
Confidence 999999985443323344443
No 103
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=96.84 E-value=0.0012 Score=58.77 Aligned_cols=91 Identities=21% Similarity=0.183 Sum_probs=68.6
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC----ccccccccccCCCCcEEEE
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ----KERKCLDLVLGQESSIVIV 228 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~----~~~K~L~~l~~~~~~vvIi 228 (398)
+.+.||+.++|+.+.+.|.+.|.|++.+.++..+++.++... +| +.+++.+.... .+.+-+++++.+++.+++|
T Consensus 83 ~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~-~f-~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~v 160 (210)
T 2ah5_A 83 AQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHH-FF-DGIYGSSPEAPHKADVIHQALQTHQLAPEQAIII 160 (210)
T ss_dssp CEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGG-GC-SEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchh-he-eeeecCCCCCCCChHHHHHHHHHcCCCcccEEEE
Confidence 568899999999996699999999999999999999998765 78 55666661111 3455567777788999999
Q ss_pred eCCcccccCCCCceEEe
Q 039039 229 DDTESVWGGRVENLITV 245 (398)
Q Consensus 229 DD~~~vw~~~~~N~I~I 245 (398)
+|++.-.......++++
T Consensus 161 gDs~~Di~~a~~aG~~~ 177 (210)
T 2ah5_A 161 GDTKFDMLGARETGIQK 177 (210)
T ss_dssp ESSHHHHHHHHHHTCEE
T ss_pred CCCHHHHHHHHHCCCcE
Confidence 99985443333445543
No 104
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=96.81 E-value=0.0012 Score=61.23 Aligned_cols=81 Identities=25% Similarity=0.329 Sum_probs=64.6
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcEE
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSIV 226 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~vv 226 (398)
+.+.||+.++|+.+.+.|.++|.|++.+.++..+++.++... +| +.+++.++... .+.+-+++++.+++.++
T Consensus 120 ~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~-~f-~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~ 197 (260)
T 2gfh_A 120 MILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQS-YF-DAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV 197 (260)
T ss_dssp CCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGG-GC-SEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHh-hh-heEEecCCCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence 467899999999997779999999999999999999998775 88 55676766542 24455566667889999
Q ss_pred EEeCC-c-ccc
Q 039039 227 IVDDT-E-SVW 235 (398)
Q Consensus 227 IiDD~-~-~vw 235 (398)
+|+|+ . ++-
T Consensus 198 ~vGDs~~~Di~ 208 (260)
T 2gfh_A 198 MVGDTLETDIQ 208 (260)
T ss_dssp EEESCTTTHHH
T ss_pred EECCCchhhHH
Confidence 99995 4 444
No 105
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=96.76 E-value=0.0037 Score=58.96 Aligned_cols=125 Identities=15% Similarity=0.065 Sum_probs=72.6
Q ss_pred ccCceEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEEeCccHHHHHHHh-hc
Q 039039 90 RMRKLHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEA-SR 168 (398)
Q Consensus 90 ~~~Kl~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vklRPgl~eFL~~~-s~ 168 (398)
..+|..+|||+||||+..... ...+......|.... ...|. . .-.....||+.+||+.+ +.
T Consensus 55 ~~~~~avVfDIDgTlldn~~y---------~~~~~~~~~~f~~~~----w~~wv---~--~~~~~~~pG~~ell~~L~~~ 116 (262)
T 3ocu_A 55 KGKKKAVVADLNETMLDNSPY---------AGWQVQNNKPFDGKD----WTRWV---D--ARQSRAVPGAVEFNNYVNSH 116 (262)
T ss_dssp TTCEEEEEECCBTTTEECHHH---------HHHHHHHTCCCCHHH----HHHHH---H--HTCCEECTTHHHHHHHHHHT
T ss_pred CCCCeEEEEECCCcCCCCchh---------hhhhccccccCCHHH----HHHHH---H--cCCCCCCccHHHHHHHHHHC
Confidence 467889999999999998741 111111111221000 00000 0 01246789999999999 67
Q ss_pred cccEEEEcCCcH----HHHHHHHHHhCCCCCccceeEEEccCCCCccccccc--cccC-CCCcEEEEeCCccccc
Q 039039 169 LFEISVCTMGNR----EYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLD--LVLG-QESSIVIVDDTESVWG 236 (398)
Q Consensus 169 ~yEi~I~T~g~~----~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~--~l~~-~~~~vvIiDD~~~vw~ 236 (398)
.++|+|-|+... .-+..-++.++-.. ++.+.++.|+.... |.-. .+.. +...++.|.|...=+.
T Consensus 117 G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~-~~~~~Lilr~~~~~---K~~~r~~l~~~Gy~iv~~vGD~~~Dl~ 187 (262)
T 3ocu_A 117 NGKVFYVTNRKDSTEKSGTIDDMKRLGFNG-VEESAFYLKKDKSA---KAARFAEIEKQGYEIVLYVGDNLDDFG 187 (262)
T ss_dssp TEEEEEEEEEETTTTHHHHHHHHHHHTCSC-CSGGGEEEESSCSC---CHHHHHHHHHTTEEEEEEEESSGGGGC
T ss_pred CCeEEEEeCCCccchHHHHHHHHHHcCcCc-ccccceeccCCCCC---hHHHHHHHHhcCCCEEEEECCChHHhc
Confidence 899999998754 57777777776553 34335666765432 2211 1211 2456888888764443
No 106
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=96.75 E-value=0.0013 Score=61.77 Aligned_cols=124 Identities=15% Similarity=0.070 Sum_probs=70.0
Q ss_pred ccCceEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEEeCccHHHHHHHh-hc
Q 039039 90 RMRKLHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEA-SR 168 (398)
Q Consensus 90 ~~~Kl~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vklRPgl~eFL~~~-s~ 168 (398)
..++..+||||||||+++... ..........| . ... ..|.- ..-..+.||+.++|+.+ .+
T Consensus 56 ~~~~kavifDlDGTLld~~~~---------~~~~~~~~~~~-~-~~~---~~~~~-----~~~~~~~pg~~e~L~~L~~~ 116 (258)
T 2i33_A 56 TEKKPAIVLDLDETVLDNSPH---------QAMSVKTGKGY-P-YKW---DDWIN-----KAEAEALPGSIDFLKYTESK 116 (258)
T ss_dssp CSSEEEEEECSBTTTEECHHH---------HHHHHHHSCCT-T-TTH---HHHHH-----HCCCEECTTHHHHHHHHHHT
T ss_pred CCCCCEEEEeCcccCcCCHHH---------HHHHHhcccch-H-HHH---HHHHH-----cCCCCcCccHHHHHHHHHHC
Confidence 567789999999999998631 11111111111 0 000 00000 00135679999999999 67
Q ss_pred cccEEEEcCCc---HHHHHHHHHHhCCCC-CccceeEEEccCCCCcccccccccc--CCCCcEEEEeCCccccc
Q 039039 169 LFEISVCTMGN---REYATRAVKLLDPDC-KYFNSRIITREDFKQKERKCLDLVL--GQESSIVIVDDTESVWG 236 (398)
Q Consensus 169 ~yEi~I~T~g~---~~YA~~il~~LDP~~-~~F~~ri~srd~~~~~~~K~L~~l~--~~~~~vvIiDD~~~vw~ 236 (398)
.+.++|.|+.. +..+...++.++... .+| +-+++.++. +.++..+.. .....+++|.|+..-..
T Consensus 117 Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~-~vi~~~~~~---~K~~~~~~~~~~~~~~~l~VGDs~~Di~ 186 (258)
T 2i33_A 117 GVDIYYISNRKTNQLDATIKNLERVGAPQATKE-HILLQDPKE---KGKEKRRELVSQTHDIVLFFGDNLSDFT 186 (258)
T ss_dssp TCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTT-TEEEECTTC---CSSHHHHHHHHHHEEEEEEEESSGGGST
T ss_pred CCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCc-eEEECCCCC---CCcHHHHHHHHhCCCceEEeCCCHHHhc
Confidence 79999999998 666677777777652 244 444443322 112221111 12344888999875443
No 107
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=96.65 E-value=0.002 Score=56.10 Aligned_cols=81 Identities=21% Similarity=0.249 Sum_probs=64.1
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
+...||+.++|+++. ..+.++|.|++.+.++..+++.++..+ +| +.+++.++... .+.+-+++++.+++.+
T Consensus 83 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~-~f-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 160 (216)
T 2pib_A 83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK-YF-DVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKV 160 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GC-SEEECGGGSSSCTTSTHHHHHHHHHHTCCGGGE
T ss_pred CCcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHH-hc-CEEeecccCCCCCcCcHHHHHHHHHcCCCCceE
Confidence 678999999999995 559999999999999999999998775 78 55776766443 2333455566688999
Q ss_pred EEEeCCcccc
Q 039039 226 VIVDDTESVW 235 (398)
Q Consensus 226 vIiDD~~~vw 235 (398)
+.|+|++.-.
T Consensus 161 i~iGD~~~Di 170 (216)
T 2pib_A 161 VVFEDSKSGV 170 (216)
T ss_dssp EEEECSHHHH
T ss_pred EEEeCcHHHH
Confidence 9999998443
No 108
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=96.56 E-value=0.0034 Score=54.56 Aligned_cols=82 Identities=22% Similarity=0.252 Sum_probs=64.3
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
..++||+.++|+.+. +.+.++|.|++.+.++..+++.++-.+ +| +.+++.++... .+.+-+++++.+++.+
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 165 (214)
T 3e58_A 88 ELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQG-FF-DIVLSGEEFKESKPNPEIYLTALKQLNVQASRA 165 (214)
T ss_dssp HHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GC-SEEEEGGGCSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred CCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHh-he-eeEeecccccCCCCChHHHHHHHHHcCCChHHe
Confidence 368899999999995 459999999999999999999998765 78 55777776543 2334455666688999
Q ss_pred EEEeCCccccc
Q 039039 226 VIVDDTESVWG 236 (398)
Q Consensus 226 vIiDD~~~vw~ 236 (398)
+.|+|++.-..
T Consensus 166 ~~iGD~~~Di~ 176 (214)
T 3e58_A 166 LIIEDSEKGIA 176 (214)
T ss_dssp EEEECSHHHHH
T ss_pred EEEeccHhhHH
Confidence 99999985443
No 109
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=96.55 E-value=0.0031 Score=56.13 Aligned_cols=78 Identities=22% Similarity=0.311 Sum_probs=63.7
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcEE
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSIV 226 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~vv 226 (398)
..+.|++.++|+.+.+.|.++|.|++.+.++..+++.++... +| +.+++.++... .+.+-+++++.+++.++
T Consensus 106 ~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~-~f-~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~ 183 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDR-YF-KKIILSEDLGVLKPRPEIFHFALSATQSELRESL 183 (240)
T ss_dssp CCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGG-GC-SEEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred CCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHh-hc-eeEEEeccCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 567899999999999889999999999999999999988765 78 56777776543 23344566667889999
Q ss_pred EEeCCc
Q 039039 227 IVDDTE 232 (398)
Q Consensus 227 IiDD~~ 232 (398)
.|+|++
T Consensus 184 ~iGD~~ 189 (240)
T 3qnm_A 184 MIGDSW 189 (240)
T ss_dssp EEESCT
T ss_pred EECCCc
Confidence 999995
No 110
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=96.55 E-value=0.0026 Score=56.00 Aligned_cols=93 Identities=9% Similarity=0.022 Sum_probs=67.1
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCC---------CccccccccccCCCC
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFK---------QKERKCLDLVLGQES 223 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~---------~~~~K~L~~l~~~~~ 223 (398)
+.++||+.++|+.+.+.|.++|.|++.+.++..+++.++... +|.+.+.+.++.. ..+.+-++++...++
T Consensus 68 ~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~ 146 (206)
T 1rku_A 68 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY 146 (206)
T ss_dssp CCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCC-EEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTC
T ss_pred cCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcc-eecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCC
Confidence 567999999999996559999999999999999999998775 7865566544432 122334455555678
Q ss_pred cEEEEeCCcccccCCCCceEEeC
Q 039039 224 SIVIVDDTESVWGGRVENLITVG 246 (398)
Q Consensus 224 ~vvIiDD~~~vw~~~~~N~I~I~ 246 (398)
.++.|+|+..-.......++.+.
T Consensus 147 ~~~~iGD~~~Di~~a~~aG~~~~ 169 (206)
T 1rku_A 147 RVIAAGDSYNDTTMLSEAHAGIL 169 (206)
T ss_dssp EEEEEECSSTTHHHHHHSSEEEE
T ss_pred EEEEEeCChhhHHHHHhcCccEE
Confidence 99999999854433334566543
No 111
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=96.52 E-value=0.0035 Score=56.20 Aligned_cols=91 Identities=20% Similarity=0.265 Sum_probs=66.7
Q ss_pred EEEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCc
Q 039039 152 LVKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESS 224 (398)
Q Consensus 152 ~vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~ 224 (398)
.+.+.||+.++|+.+. +.+.++|.|++.+.++..+++.++... +| +.+++.++... .+.+-+++++.+++.
T Consensus 81 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~-~f-~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~ 158 (222)
T 2nyv_A 81 YTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSG-YF-DLIVGGDTFGEKKPSPTPVLKTLEILGEEPEK 158 (222)
T ss_dssp SCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GC-SEEECTTSSCTTCCTTHHHHHHHHHHTCCGGG
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHH-Hh-eEEEecCcCCCCCCChHHHHHHHHHhCCCchh
Confidence 3578999999999995 569999999999999999999998654 78 55777766432 123334555667889
Q ss_pred EEEEeCCcccccCCCCceEE
Q 039039 225 IVIVDDTESVWGGRVENLIT 244 (398)
Q Consensus 225 vvIiDD~~~vw~~~~~N~I~ 244 (398)
+++|+|+..-.......++.
T Consensus 159 ~~~vGD~~~Di~~a~~aG~~ 178 (222)
T 2nyv_A 159 ALIVGDTDADIEAGKRAGTK 178 (222)
T ss_dssp EEEEESSHHHHHHHHHHTCE
T ss_pred EEEECCCHHHHHHHHHCCCe
Confidence 99999997544332333443
No 112
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=96.48 E-value=0.0035 Score=56.86 Aligned_cols=89 Identities=12% Similarity=0.111 Sum_probs=67.4
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
+.+.||+.++|+.+. +.+.+.|.|++.+.++..+++.++.. +| +.+++.++... .+.+-+++++.+++.+
T Consensus 109 ~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~--~f-~~~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~ 185 (240)
T 2hi0_A 109 TGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG--SF-DFALGEKSGIRRKPAPDMTSECVKVLGVPRDKC 185 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT--TC-SEEEEECTTSCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc--ce-eEEEecCCCCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 567899999999995 67999999999999999999998865 78 56777776542 2344556667788999
Q ss_pred EEEeCCcccccCCCCceEE
Q 039039 226 VIVDDTESVWGGRVENLIT 244 (398)
Q Consensus 226 vIiDD~~~vw~~~~~N~I~ 244 (398)
++|+|++.-.......++.
T Consensus 186 ~~vGDs~~Di~~a~~aG~~ 204 (240)
T 2hi0_A 186 VYIGDSEIDIQTARNSEMD 204 (240)
T ss_dssp EEEESSHHHHHHHHHTTCE
T ss_pred EEEcCCHHHHHHHHHCCCe
Confidence 9999998544332334443
No 113
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=96.45 E-value=0.003 Score=56.79 Aligned_cols=89 Identities=20% Similarity=0.144 Sum_probs=67.1
Q ss_pred EEeCccHHHHHHHhhc-cccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCC-CCc
Q 039039 153 VKLRPFVRSFLEEASR-LFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQ-ESS 224 (398)
Q Consensus 153 vklRPgl~eFL~~~s~-~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~-~~~ 224 (398)
..++||+.++|+.+.+ .+.++|.|++.+.++..+++.++... +| +.+++.++... .+.+-+++++.+ ++.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f-~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~ 186 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDR-YF-KYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDK 186 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGG-GC-SEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGG
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHh-hE-EEEEeccccCCCCCCHHHHHHHHHHcCCCCCCc
Confidence 5689999999999954 59999999999999999999998775 78 55777776653 123345556667 899
Q ss_pred EEEEeCCcccccCCCCceE
Q 039039 225 IVIVDDTESVWGGRVENLI 243 (398)
Q Consensus 225 vvIiDD~~~vw~~~~~N~I 243 (398)
++.|+|++.-.......++
T Consensus 187 ~i~vGD~~~Di~~a~~aG~ 205 (240)
T 3sd7_A 187 VIMVGDRKYDIIGAKKIGI 205 (240)
T ss_dssp EEEEESSHHHHHHHHHHTC
T ss_pred EEEECCCHHHHHHHHHCCC
Confidence 9999999854433233344
No 114
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=96.44 E-value=0.0034 Score=56.68 Aligned_cols=78 Identities=19% Similarity=0.171 Sum_probs=61.8
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
+.+.||+.++|+.+. ..+.++|.|++.+.++..+++.++... +| +.+++.++... .+.+-+++++.+++.+
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f-~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~ 170 (241)
T 2hoq_A 93 LREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDD-FF-EHVIISDFEGVKKPHPKIFKKALKAFNVKPEEA 170 (241)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGG-GC-SEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGE
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHh-hc-cEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccE
Confidence 457899999999995 569999999999999999999998664 78 55777766543 2233455566678899
Q ss_pred EEEeCCc
Q 039039 226 VIVDDTE 232 (398)
Q Consensus 226 vIiDD~~ 232 (398)
+.|+|++
T Consensus 171 i~iGD~~ 177 (241)
T 2hoq_A 171 LMVGDRL 177 (241)
T ss_dssp EEEESCT
T ss_pred EEECCCc
Confidence 9999997
No 115
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=96.36 E-value=0.0047 Score=56.21 Aligned_cols=81 Identities=16% Similarity=0.139 Sum_probs=62.8
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
+.+.||+.++|+.+. +.+.++|.|++.+.++..+++.++... +| +.+++.+++.. .+.+-+++++.+++.+
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~-~f-~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~ 190 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDH-LF-SEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQI 190 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG-GC-SEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchh-eE-EEEEecccCCCCCcCHHHHHHHHHHhCcChhhE
Confidence 478899999999995 569999999999999999999997664 78 56777766543 1222345556678899
Q ss_pred EEEeCCcccc
Q 039039 226 VIVDDTESVW 235 (398)
Q Consensus 226 vIiDD~~~vw 235 (398)
++|+|+..-.
T Consensus 191 ~~vGD~~~Di 200 (243)
T 2hsz_A 191 LFVGDSQNDI 200 (243)
T ss_dssp EEEESSHHHH
T ss_pred EEEcCCHHHH
Confidence 9999998443
No 116
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=96.27 E-value=0.0032 Score=55.38 Aligned_cols=92 Identities=14% Similarity=0.138 Sum_probs=66.7
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcEE
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSIV 226 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~vv 226 (398)
+.+.||+.++|+.+.+.+.++|.|++.+.++..+++.++... +| +.+++.+++.. .+.+-+++++.+++.++
T Consensus 82 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~~-~f-~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i 159 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMM-RM-AVTISADDTPKRKPDPLPLLTALEKVNVAPQNAL 159 (209)
T ss_dssp CEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGG-GE-EEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEE
T ss_pred CCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChHh-hc-cEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEE
Confidence 568999999999995449999999999999999999886654 77 56777766532 12334455566788999
Q ss_pred EEeCCcccccCCCCceEEeC
Q 039039 227 IVDDTESVWGGRVENLITVG 246 (398)
Q Consensus 227 IiDD~~~vw~~~~~N~I~I~ 246 (398)
.|+|+..-.......++.+.
T Consensus 160 ~vGD~~~Di~~a~~aG~~~~ 179 (209)
T 2hdo_A 160 FIGDSVSDEQTAQAANVDFG 179 (209)
T ss_dssp EEESSHHHHHHHHHHTCEEE
T ss_pred EECCChhhHHHHHHcCCeEE
Confidence 99999854433233444443
No 117
>4gns_A Chitin biosynthesis protein CHS5; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.26 E-value=0.0066 Score=53.24 Aligned_cols=89 Identities=18% Similarity=0.175 Sum_probs=65.5
Q ss_pred hhhhhhhheecccceeEEecCCCCCC-ch--hhHHHHHHhCCEEee-ecCCCccEEEECCC----CCHHHHHHHhCCCee
Q 039039 304 RSCLAKIRSRILMGCTILFGDDDFEE-LP--LTWSRAEEMGAICTL-VTDASITHVVSSNT----QSETFEWAEQENKCL 375 (398)
Q Consensus 304 r~il~~~r~~vl~g~~i~fSg~~~~~-~~--~l~~la~~lGa~~~~-~~~~~vTHlVa~~~----~t~K~~~A~~~gi~I 375 (398)
+-|++.-+---++|.++|+..+.|.. .+ .+.+.....||.-.. .+.-++||.||.+. ..+....|+-++|+|
T Consensus 151 kvilrthkmtdmsgitvclgpldplkeisdlqisqclshigarplqrhvaidtthfvcndldneesneelirakhnnipi 230 (290)
T 4gns_A 151 KVILRTHKMTDMSGITVCLGPLDPLKEISDLQISQCLSHIGARPLQRHVAIDTTHFVCNDLDNEESNEELIRAKHNNIPI 230 (290)
T ss_dssp EEEEECCCTTCCTTCCEEECCCCGGGTCCHHHHHHHHHHTTCCCCBSSCCTTCCEEECSCCTTCTTCHHHHHHHHTTCCE
T ss_pred heeeeecccccccCceEEecCCChhhhhhhccHHHHHHHhCCchhhheeeeecceeeecCCCcccchHHHHhhhccCCCc
Confidence 34555555556899999999988873 23 556677788987643 35568999999863 346677888899999
Q ss_pred eChhHHHHHHHhcCcCC
Q 039039 376 VHPQWINDAYFLWCRQP 392 (398)
Q Consensus 376 V~~~WL~~c~~~~~r~~ 392 (398)
|.|+|+.+|--..+-+.
T Consensus 231 vrpewvracevekrivg 247 (290)
T 4gns_A 231 VRPEWVRACEVEKRIVG 247 (290)
T ss_dssp ECTHHHHHHHHTTSCCC
T ss_pred cCHHHHHHHhhhheeee
Confidence 99999999976554443
No 118
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=96.22 E-value=0.0037 Score=55.37 Aligned_cols=89 Identities=15% Similarity=0.169 Sum_probs=66.8
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
+.+.||+.++|+.+. ..+.++|.|++.+.++..+++.++-.. +| +.+++.++... .+.+-+++++.+++.+
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f-~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 162 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAF-YF-DAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDA 162 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGG-GC-SEEEEECTTSSSCSHHHHHHHHHHHHTCCGGGE
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHh-he-eeeeccCCCCCCCCCHHHHHHHHHHhCcCcccE
Confidence 468899999999995 459999999999999999999988765 78 55777766543 2334455666677899
Q ss_pred EEEeCCcccccCCCCceE
Q 039039 226 VIVDDTESVWGGRVENLI 243 (398)
Q Consensus 226 vIiDD~~~vw~~~~~N~I 243 (398)
+.|+|+..-.......++
T Consensus 163 i~iGD~~~Di~~a~~aG~ 180 (226)
T 3mc1_A 163 IMIGDREYDVIGALKNNL 180 (226)
T ss_dssp EEEESSHHHHHHHHTTTC
T ss_pred EEECCCHHHHHHHHHCCC
Confidence 999999854433333444
No 119
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=96.22 E-value=0.0053 Score=54.84 Aligned_cols=89 Identities=15% Similarity=0.013 Sum_probs=66.9
Q ss_pred EEeCccHHHHHHHhhc-cccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEASR-LFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s~-~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
..+.||+.++|+.+.+ .+.++|.|++.+.+++.+++.++-.. +| +.+++.++... .+.+-+++++.+++.+
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f-~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~ 180 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDT-RL-TVIAGDDSVERGKPHPDMALHVARGLGIPPERC 180 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGG-TC-SEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGE
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchh-he-eeEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHe
Confidence 4578999999999955 69999999999999999999988664 78 55777776543 2334455666788999
Q ss_pred EEEeCCcccccCCCCceE
Q 039039 226 VIVDDTESVWGGRVENLI 243 (398)
Q Consensus 226 vIiDD~~~vw~~~~~N~I 243 (398)
+.|+|+..-.......++
T Consensus 181 i~vGD~~~Di~~a~~aG~ 198 (237)
T 4ex6_A 181 VVIGDGVPDAEMGRAAGM 198 (237)
T ss_dssp EEEESSHHHHHHHHHTTC
T ss_pred EEEcCCHHHHHHHHHCCC
Confidence 999999954433233444
No 120
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=96.08 E-value=0.0064 Score=55.43 Aligned_cols=90 Identities=12% Similarity=0.081 Sum_probs=66.9
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcEE
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSIV 226 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~vv 226 (398)
+.+.||+.++|+.+. .+.++|.|++.+.++..+++.++... +| +.+++.++... .+.+-+++++.+++.++
T Consensus 92 ~~~~~~~~~~l~~l~-g~~~~i~t~~~~~~~~~~l~~~gl~~-~f-~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 168 (253)
T 1qq5_A 92 LTPYPDAAQCLAELA-PLKRAILSNGAPDMLQALVANAGLTD-SF-DAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVL 168 (253)
T ss_dssp CCBCTTHHHHHHHHT-TSEEEEEESSCHHHHHHHHHHTTCGG-GC-SEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEE
T ss_pred CCCCccHHHHHHHHc-CCCEEEEeCcCHHHHHHHHHHCCchh-hc-cEEEEccccCCCCCCHHHHHHHHHHcCCCHHHEE
Confidence 467899999999999 99999999999999999999987654 78 55777776542 23344556666788999
Q ss_pred EEeCCcccccCCCCceEEe
Q 039039 227 IVDDTESVWGGRVENLITV 245 (398)
Q Consensus 227 IiDD~~~vw~~~~~N~I~I 245 (398)
+|+|+..-.......++.+
T Consensus 169 ~vGD~~~Di~~a~~aG~~~ 187 (253)
T 1qq5_A 169 FVSSNGFDVGGAKNFGFSV 187 (253)
T ss_dssp EEESCHHHHHHHHHHTCEE
T ss_pred EEeCChhhHHHHHHCCCEE
Confidence 9999984333222334443
No 121
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=96.05 E-value=0.0063 Score=56.64 Aligned_cols=88 Identities=10% Similarity=0.012 Sum_probs=65.3
Q ss_pred EEeCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhC---CCCCccceeEEEccCCCC-----ccccccccccCCCC
Q 039039 153 VKLRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLD---PDCKYFNSRIITREDFKQ-----KERKCLDLVLGQES 223 (398)
Q Consensus 153 vklRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LD---P~~~~F~~ri~srd~~~~-----~~~K~L~~l~~~~~ 223 (398)
+.+.||+.++|+.+ .+.+.++|.|++.+.++..+++.++ -. .+| +.+++. +... .+.+-+++++.+++
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~-~~f-d~i~~~-~~~~KP~p~~~~~~~~~lg~~p~ 205 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDIL-ELV-DGHFDT-KIGHKVESESYRKIADSIGCSTN 205 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCG-GGC-SEEECG-GGCCTTCHHHHHHHHHHHTSCGG
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChH-hhc-cEEEec-CCCCCCCHHHHHHHHHHhCcCcc
Confidence 57899999999999 5689999999999999999998664 33 478 557766 4432 24455666777889
Q ss_pred cEEEEeCCcccccCCCCceE
Q 039039 224 SIVIVDDTESVWGGRVENLI 243 (398)
Q Consensus 224 ~vvIiDD~~~vw~~~~~N~I 243 (398)
.+|+|+|+..-.......++
T Consensus 206 ~~l~VgDs~~di~aA~~aG~ 225 (261)
T 1yns_A 206 NILFLTDVTREASAAEEADV 225 (261)
T ss_dssp GEEEEESCHHHHHHHHHTTC
T ss_pred cEEEEcCCHHHHHHHHHCCC
Confidence 99999999744432233343
No 122
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=95.97 E-value=0.0054 Score=53.67 Aligned_cols=88 Identities=17% Similarity=0.120 Sum_probs=63.4
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcEE
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSIV 226 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~vv 226 (398)
+.+.||+.+ |+.+.+.+.++|.|++.+.++..+++.++... +| +.+++.++... .+.+-+++++ ++.++
T Consensus 73 ~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f-~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~~~ 147 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLR-YF-KGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAF 147 (201)
T ss_dssp CEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGG-GC-SEEEEGGGGTCCTTCHHHHHHHHHHHT--CSCCE
T ss_pred cccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHH-hC-cEEEehhhcCCCCCCHHHHHHHHHhcC--CCcEE
Confidence 467899999 99994339999999999999999999988765 78 55777766543 1233344444 78899
Q ss_pred EEeCCcccccCCCCceEEe
Q 039039 227 IVDDTESVWGGRVENLITV 245 (398)
Q Consensus 227 IiDD~~~vw~~~~~N~I~I 245 (398)
+|+|++.-.......++.+
T Consensus 148 ~vGD~~~Di~~a~~aG~~~ 166 (201)
T 2w43_A 148 LVSSNAFDVIGAKNAGMRS 166 (201)
T ss_dssp EEESCHHHHHHHHHTTCEE
T ss_pred EEeCCHHHhHHHHHCCCEE
Confidence 9999985443323344443
No 123
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=95.95 E-value=0.0055 Score=55.82 Aligned_cols=91 Identities=8% Similarity=-0.080 Sum_probs=68.2
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCC-C------ccccccccccCCCCc
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFK-Q------KERKCLDLVLGQESS 224 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~-~------~~~K~L~~l~~~~~~ 224 (398)
..+.||+.++|+.+. ..+.++|+|++.+.++..+++.++... +|...+++.++.. . .+.+-+++++.+++.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~-~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~ 187 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTE-LAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPER 187 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHH-HHCSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGG
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHh-hccceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHH
Confidence 578899999999995 479999999999999999999987664 7855477776654 2 233345566668899
Q ss_pred EEEEeCCcccccCCCCceEE
Q 039039 225 IVIVDDTESVWGGRVENLIT 244 (398)
Q Consensus 225 vvIiDD~~~vw~~~~~N~I~ 244 (398)
++.|+|+..-.......++.
T Consensus 188 ~i~iGD~~~Di~~a~~aG~~ 207 (259)
T 4eek_A 188 CVVIEDSVTGGAAGLAAGAT 207 (259)
T ss_dssp EEEEESSHHHHHHHHHHTCE
T ss_pred EEEEcCCHHHHHHHHHCCCE
Confidence 99999998544333334444
No 124
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=95.93 E-value=0.0058 Score=54.26 Aligned_cols=78 Identities=21% Similarity=0.134 Sum_probs=61.7
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcEE
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSIV 226 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~vv 226 (398)
..+.|++.++|+.+.+.+.++|+|++.+.++..+++.++... +| +.+++.++... .+.+-+++++.+++.++
T Consensus 99 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~-~f-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 176 (234)
T 3u26_A 99 GELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKD-LF-DSITTSEEAGFFKPHPRIFELALKKAGVKGEEAV 176 (234)
T ss_dssp CCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGG-GC-SEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred CCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHH-Hc-ceeEeccccCCCCcCHHHHHHHHHHcCCCchhEE
Confidence 467899999999996559999999999999999999988764 78 55776665432 13344555666889999
Q ss_pred EEeCCc
Q 039039 227 IVDDTE 232 (398)
Q Consensus 227 IiDD~~ 232 (398)
.|+|+.
T Consensus 177 ~vGD~~ 182 (234)
T 3u26_A 177 YVGDNP 182 (234)
T ss_dssp EEESCT
T ss_pred EEcCCc
Confidence 999996
No 125
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=95.89 E-value=0.015 Score=49.71 Aligned_cols=74 Identities=12% Similarity=0.104 Sum_probs=44.6
Q ss_pred CccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEeCCcc
Q 039039 156 RPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVDDTES 233 (398)
Q Consensus 156 RPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiDD~~~ 233 (398)
-|++.+.|+++ .+.+.++|+|.-+......+...++..|.-+ ..| +.+.-. ..+-.....+....-++|||+..
T Consensus 26 ~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~-~~I-~~n~P~--~~~~~~~~~rK~~~~~fIDDR~~ 100 (142)
T 2obb_A 26 IPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF-YAA-NKDYPE--EERDHQGFSRKLKADLFIDDRNV 100 (142)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC-SEE-SSSSTT--C---CCSCCSSCCCSEEECTTST
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe-EEE-EcCCch--hhhcchhhcCCcCCCEEeecccc
Confidence 38999999999 6789999999987666667777776665322 222 121110 01100112233556677999873
No 126
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=95.88 E-value=0.014 Score=51.68 Aligned_cols=90 Identities=22% Similarity=0.120 Sum_probs=64.8
Q ss_pred EEeCccHHHHHHHhhc--cccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCc-------ccccccccc--CC
Q 039039 153 VKLRPFVRSFLEEASR--LFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQK-------ERKCLDLVL--GQ 221 (398)
Q Consensus 153 vklRPgl~eFL~~~s~--~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~-------~~K~L~~l~--~~ 221 (398)
+.+.||+.++|+.+.+ .+.+.|.|++.+.++..+++.++... +|.. +.+.++.... +.+-+++++ .+
T Consensus 92 ~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~-~f~~-~~~~~~~~~~~k~~~~~~~~~~~~lg~~~~ 169 (234)
T 2hcf_A 92 ITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH-YFPF-GAFADDALDRNELPHIALERARRMTGANYS 169 (234)
T ss_dssp EEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST-TCSC-EECTTTCSSGGGHHHHHHHHHHHHHCCCCC
T ss_pred CCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchh-hcCc-ceecCCCcCccchHHHHHHHHHHHhCCCCC
Confidence 5788999999999966 49999999999999999999998775 7854 4445554321 122234455 57
Q ss_pred CCcEEEEeCCcccccCCCCceEE
Q 039039 222 ESSIVIVDDTESVWGGRVENLIT 244 (398)
Q Consensus 222 ~~~vvIiDD~~~vw~~~~~N~I~ 244 (398)
++.++.|+|++.-.......++.
T Consensus 170 ~~~~i~iGD~~~Di~~a~~aG~~ 192 (234)
T 2hcf_A 170 PSQIVIIGDTEHDIRCARELDAR 192 (234)
T ss_dssp GGGEEEEESSHHHHHHHHTTTCE
T ss_pred cccEEEECCCHHHHHHHHHCCCc
Confidence 88999999998544333344543
No 127
>3l41_A BRCT-containing protein 1; BRC1, BRCT domain, tandem BRCT repeat, phosphoserine binding domain, DNA repair, cell division, mitosis; HET: SEP; 1.45A {Schizosaccharomyces pombe} PDB: 3l40_A*
Probab=95.69 E-value=0.016 Score=53.23 Aligned_cols=86 Identities=15% Similarity=0.224 Sum_probs=58.0
Q ss_pred heecccceeEEecCCC--CCCchhhHHHHHHhCCEEeee--cC--------CCccEEEECCCCCH---HHHHHHh--CCC
Q 039039 311 RSRILMGCTILFGDDD--FEELPLTWSRAEEMGAICTLV--TD--------ASITHVVSSNTQSE---TFEWAEQ--ENK 373 (398)
Q Consensus 311 r~~vl~g~~i~fSg~~--~~~~~~l~~la~~lGa~~~~~--~~--------~~vTHlVa~~~~t~---K~~~A~~--~gi 373 (398)
+.++|+|+.|++++-+ ......+..+++..||++... +. +.-.+||+...... +++.... .++
T Consensus 110 ~~~LF~G~~f~it~~~~~~p~~~~l~~iI~~~GG~v~~~p~~~~~~~~~~~~~~~~vis~~~d~~~~~~f~~~~~~~~~~ 189 (220)
T 3l41_A 110 GPSLLEDYVVYLTSKTVAPENVPAVISIVKSNGGVCSTLNVYNKRLARHLEDGNVVLITCNEDSHIWTNFLDNASQNKTI 189 (220)
T ss_dssp CSCTTTTSEEEEETTSSCGGGHHHHHHHHHHTTCEEEEECSCCHHHHHHHHHCCEEEEECGGGHHHHTTTHHHHTTCTTE
T ss_pred CchhhhheeEEEeccccCCCCCceEEEEEecCCcEechhhHHHHHHHHhcccCCEEEEEeCCcchHHHHhhccccccceE
Confidence 4789999999999876 445668999999999999871 10 12257777632211 1222112 356
Q ss_pred eeeChhHHHHHHHhcCcCCCCCC
Q 039039 374 CLVHPQWINDAYFLWCRQPNDVS 396 (398)
Q Consensus 374 ~IV~~~WL~~c~~~~~r~~E~~Y 396 (398)
.||+++||..++.+.+---|+.+
T Consensus 190 ~i~~~e~ll~~il~q~l~~~~~~ 212 (220)
T 3l41_A 190 FLQNYDWLIKTVLRQEIDVNDRI 212 (220)
T ss_dssp EEEEHHHHHHHHHHTCCCTTCCB
T ss_pred EEechhHHHHHHHHHHcCcchHH
Confidence 69999999999987765555444
No 128
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=95.68 E-value=0.0081 Score=54.87 Aligned_cols=87 Identities=10% Similarity=0.106 Sum_probs=66.0
Q ss_pred EeCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcEE
Q 039039 154 KLRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSIV 226 (398)
Q Consensus 154 klRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~vv 226 (398)
.+.||+.++|+.+ .+.+.+.+.|++.+ +..+++.++-.. +| +.+++.++... .+.+.+++++.+++.+|
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~-~f-d~i~~~~~~~~~KP~p~~~~~a~~~lg~~p~e~l 170 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELRE-FF-TFCADASQLKNSKPDPEIFLAACAGLGVPPQACI 170 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGG-GC-SEECCGGGCSSCTTSTHHHHHHHHHHTSCGGGEE
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcc-cc-ccccccccccCCCCcHHHHHHHHHHcCCChHHEE
Confidence 4679999999999 67888999988754 677899988775 78 66777777653 46677888888999999
Q ss_pred EEeCCcccccCCCCceEE
Q 039039 227 IVDDTESVWGGRVENLIT 244 (398)
Q Consensus 227 IiDD~~~vw~~~~~N~I~ 244 (398)
+|+|++.-.......+++
T Consensus 171 ~VgDs~~di~aA~~aG~~ 188 (243)
T 4g9b_A 171 GIEDAQAGIDAINASGMR 188 (243)
T ss_dssp EEESSHHHHHHHHHHTCE
T ss_pred EEcCCHHHHHHHHHcCCE
Confidence 999998544333333433
No 129
>3oq0_A DBF4, protein DNA52; DDK, BRCT, RAD53, replication checkpoint, FHA domain, regula subunit of DDK, CDC7, phosphorylation, nuclear; 2.70A {Saccharomyces cerevisiae}
Probab=95.66 E-value=0.032 Score=47.71 Aligned_cols=74 Identities=16% Similarity=0.072 Sum_probs=54.1
Q ss_pred ecc-cceeEEecCCCCCC------------chhhHHHHHHhCCEEeeecCCCccEEEECCCC--------CHHHHHHHhC
Q 039039 313 RIL-MGCTILFGDDDFEE------------LPLTWSRAEEMGAICTLVTDASITHVVSSNTQ--------SETFEWAEQE 371 (398)
Q Consensus 313 ~vl-~g~~i~fSg~~~~~------------~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~--------t~K~~~A~~~ 371 (398)
+++ ++.+|.|-...... ++.+.+-...+||+|..-++.+|||+|+.++. +.-...|++.
T Consensus 19 kIM~r~s~iYFdt~~~~~~~~~~~~~l~k~~~llkk~f~~LGa~I~~FFd~~VTiIITrR~~~~~~~yp~~DIL~rAr~~ 98 (151)
T 3oq0_A 19 SHMKRDSRIYFDITDDVEMNTYNKSKMDKRRDLLKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRAKKN 98 (151)
T ss_dssp --CCCCCEEEECCCCSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEESSCCTTCCEEEESSCGGGGGGSCTTSHHHHHHHT
T ss_pred HHhccCCEEEEeCCCcchhhHHHHHHHHHHHHHHHHHHHHcCCEEeeecCCceEEEEeCCcCcccccCCcchHHHHHHHc
Confidence 455 67789998765431 12455677899999999999999999998743 3456789999
Q ss_pred CCeeeChhHHHHHHH
Q 039039 372 NKCLVHPQWINDAYF 386 (398)
Q Consensus 372 gi~IV~~~WL~~c~~ 386 (398)
|++|=+.+=|..=+.
T Consensus 99 ~mKIWs~EKl~RfL~ 113 (151)
T 3oq0_A 99 YMKVWSYEKAARFLK 113 (151)
T ss_dssp TCEEEEHHHHHHHHH
T ss_pred CCeeecHHHHHHHHH
Confidence 999987776664443
No 130
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=95.64 E-value=0.0077 Score=52.46 Aligned_cols=90 Identities=13% Similarity=0.120 Sum_probs=64.9
Q ss_pred EeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcEEE
Q 039039 154 KLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSIVI 227 (398)
Q Consensus 154 klRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~vvI 227 (398)
.+.||+.++|+.+.+...++|.|++.+.++..+++.++... +| +.+++.++... .+.+-+++++.+++.++.
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~-~f-~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 163 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGE-FL-LAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVM 163 (200)
T ss_dssp CBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGG-TC-SCEEEHHHHSCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred ccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHH-hc-ceEEeecccCCCCCCHHHHHHHHHHcCCCHHHeEE
Confidence 48899999999995444999999999999999999987654 77 45666654332 233345556667889999
Q ss_pred EeCCcccccCCCCceEEe
Q 039039 228 VDDTESVWGGRVENLITV 245 (398)
Q Consensus 228 iDD~~~vw~~~~~N~I~I 245 (398)
|+|++.-.......++.+
T Consensus 164 vgD~~~Di~~a~~aG~~~ 181 (200)
T 3cnh_A 164 VDDRLQNVQAARAVGMHA 181 (200)
T ss_dssp EESCHHHHHHHHHTTCEE
T ss_pred eCCCHHHHHHHHHCCCEE
Confidence 999995444333344444
No 131
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.54 E-value=0.012 Score=51.73 Aligned_cols=79 Identities=18% Similarity=0.227 Sum_probs=60.7
Q ss_pred EEEeCccHHHHHHHhhc--cccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCC-CCccccccccccCCCCcEEEE
Q 039039 152 LVKLRPFVRSFLEEASR--LFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDF-KQKERKCLDLVLGQESSIVIV 228 (398)
Q Consensus 152 ~vklRPgl~eFL~~~s~--~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~-~~~~~K~L~~l~~~~~~vvIi 228 (398)
.+.+.||+.++|+.+.+ .+.++|.|++.+.++..+++.++... +|.. +++.... ...+.+-+++++.+++.++.|
T Consensus 103 ~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~-~f~~-~~~~~kpk~~~~~~~~~~lgi~~~~~i~i 180 (234)
T 3ddh_A 103 PIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSP-YFDH-IEVMSDKTEKEYLRLLSILQIAPSELLMV 180 (234)
T ss_dssp CCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGG-GCSE-EEEESCCSHHHHHHHHHHHTCCGGGEEEE
T ss_pred cCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHh-hhhe-eeecCCCCHHHHHHHHHHhCCCcceEEEE
Confidence 35678999999999965 49999999999999999999988765 7744 5544322 223444556667788999999
Q ss_pred eCCc
Q 039039 229 DDTE 232 (398)
Q Consensus 229 DD~~ 232 (398)
+|+.
T Consensus 181 GD~~ 184 (234)
T 3ddh_A 181 GNSF 184 (234)
T ss_dssp ESCC
T ss_pred CCCc
Confidence 9995
No 132
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=95.54 E-value=0.0092 Score=59.33 Aligned_cols=91 Identities=18% Similarity=0.065 Sum_probs=66.3
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccc-eeEEEccCC-------------CC----cccc
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFN-SRIITREDF-------------KQ----KERK 213 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~-~ri~srd~~-------------~~----~~~K 213 (398)
+.+.||+.++|+.+. +.|.++|.|++.+.++..+++.++-.. +|. +.+++.++. .. .+.+
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~-~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~~~~~ 292 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP-YFEADFIATASDVLEAENMYPQARPLGKPNPFSYIA 292 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG-GSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH-hcCCCEEEecccccccccccccccCCCCCCHHHHHH
Confidence 467899999999995 569999999999999999999998764 884 278876653 11 2334
Q ss_pred cccccc--------------CCCCcEEEEeCCcccccCCCCceEE
Q 039039 214 CLDLVL--------------GQESSIVIVDDTESVWGGRVENLIT 244 (398)
Q Consensus 214 ~L~~l~--------------~~~~~vvIiDD~~~vw~~~~~N~I~ 244 (398)
.+.++. .+++.+++|+|++.-.......++.
T Consensus 293 a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~ 337 (384)
T 1qyi_A 293 ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGAT 337 (384)
T ss_dssp HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCE
T ss_pred HHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCE
Confidence 444544 4678999999999444332334444
No 133
>3qbz_A DDK kinase regulatory subunit DBF4; FHA domain,RAD53, replication checkpoint, cell cycle; 2.69A {Saccharomyces cerevisiae}
Probab=95.48 E-value=0.017 Score=49.83 Aligned_cols=66 Identities=20% Similarity=0.197 Sum_probs=49.8
Q ss_pred eccc-ceeEEecCCCCCCc------------hhhHHHHHHhCCEEeeecCCCccEEEECCCC--------CHHHHHHHhC
Q 039039 313 RILM-GCTILFGDDDFEEL------------PLTWSRAEEMGAICTLVTDASITHVVSSNTQ--------SETFEWAEQE 371 (398)
Q Consensus 313 ~vl~-g~~i~fSg~~~~~~------------~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~--------t~K~~~A~~~ 371 (398)
++|+ +++|.|-+..+... ..+.+-...+||++..-++.+|||||+.++- +.-...|.+.
T Consensus 57 kifk~~~vfYFDt~~~~~~~~~~k~kl~K~~~llkr~f~~LGA~I~~FFd~~VTiVIT~R~i~~~~~~~~~Dil~~A~~~ 136 (160)
T 3qbz_A 57 KIMKRDSRIYFDITDDVEMNTYNKSKMDKRRDLLKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRAKKN 136 (160)
T ss_dssp HHHHHHCEEEECCCCSSCCCHHHHHHHHHHHHHHHHHHHTTTCEEESSCCTTCCEEEESSCSSCGGGSCTTSHHHHHHHT
T ss_pred HhCccCcEEEecCCChhhhhHHHHHHHHHHHHHHHHHHHHcCCEeeeeccCCeEEEEecCcCcccccCCchhHHHHHHHc
Confidence 5787 89999998876521 1233556799999999999999999998743 3347788888
Q ss_pred CCeeeCh
Q 039039 372 NKCLVHP 378 (398)
Q Consensus 372 gi~IV~~ 378 (398)
+++|=+.
T Consensus 137 ~mKVW~y 143 (160)
T 3qbz_A 137 YMKVWSY 143 (160)
T ss_dssp TCEEEEH
T ss_pred Cceecch
Confidence 8887443
No 134
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=95.44 E-value=0.0024 Score=57.84 Aligned_cols=37 Identities=16% Similarity=0.053 Sum_probs=30.5
Q ss_pred EeCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHh
Q 039039 154 KLRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLL 190 (398)
Q Consensus 154 klRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~L 190 (398)
...||+.++|+.+ .+.+.++|.|++.+..+..+++.|
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l 125 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTL 125 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHH
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHH
Confidence 3578999999999 567999999999887777666654
No 135
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=95.35 E-value=0.013 Score=53.03 Aligned_cols=78 Identities=14% Similarity=0.106 Sum_probs=60.4
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccC-CCCccccccccccCCCCcEEEEeCC
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITRED-FKQKERKCLDLVLGQESSIVIVDDT 231 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~-~~~~~~K~L~~l~~~~~~vvIiDD~ 231 (398)
+.+.||+.++|+.+.+.+.+.|.|++.+.++..+++.++... +| +.+++... ....+.+-+++++.+++.++.|.|+
T Consensus 111 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~-~f-~~i~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~ 188 (251)
T 2pke_A 111 VEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSD-LF-PRIEVVSEKDPQTYARVLSEFDLPAERFVMIGNS 188 (251)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGG-TC-CCEEEESCCSHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred CCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHH-hC-ceeeeeCCCCHHHHHHHHHHhCcCchhEEEECCC
Confidence 467899999999998789999999999999999999987664 77 44554322 1223344455666688999999999
Q ss_pred c
Q 039039 232 E 232 (398)
Q Consensus 232 ~ 232 (398)
.
T Consensus 189 ~ 189 (251)
T 2pke_A 189 L 189 (251)
T ss_dssp C
T ss_pred c
Confidence 7
No 136
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=95.29 E-value=0.012 Score=52.16 Aligned_cols=76 Identities=14% Similarity=0.062 Sum_probs=59.4
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccc---cccccCCCC
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKC---LDLVLGQES 223 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~---L~~l~~~~~ 223 (398)
+.+.||+.++|+.+.+.+.++|.|++.+.++..+++.|+ .+| +.+++.++... .+.+- +++++.+++
T Consensus 98 ~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~l~---~~f-d~i~~~~~~~~~KP~~~~~~~~l~~~~~lgi~~~ 173 (240)
T 3smv_A 98 WPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAKLG---VEF-DHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKK 173 (240)
T ss_dssp CCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTTTC---SCC-SEEEEHHHHTSCTTSHHHHHHHHHHHHHTTCCGG
T ss_pred CCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHhcC---Ccc-CEEEEccccCCCCCCHHHHHHHHHHHHhcCCCch
Confidence 467899999999997789999999999999999888754 478 56777765442 12223 566677889
Q ss_pred cEEEEeCCc
Q 039039 224 SIVIVDDTE 232 (398)
Q Consensus 224 ~vvIiDD~~ 232 (398)
.++.|+|+.
T Consensus 174 ~~~~vGD~~ 182 (240)
T 3smv_A 174 DILHTAESL 182 (240)
T ss_dssp GEEEEESCT
T ss_pred hEEEECCCc
Confidence 999999995
No 137
>2l42_A DNA-binding protein RAP1; BRCT domain, protein binding; NMR {Saccharomyces cerevisiae}
Probab=95.22 E-value=0.012 Score=46.71 Aligned_cols=78 Identities=10% Similarity=-0.037 Sum_probs=61.7
Q ss_pred ecccceeEEecCCCCCC-----chhhHHHHHHhCCEEeeecCCCc--cEEEECCCCCHHHHHHHhCCCeeeChhHHHHHH
Q 039039 313 RILMGCTILFGDDDFEE-----LPLTWSRAEEMGAICTLVTDASI--THVVSSNTQSETFEWAEQENKCLVHPQWINDAY 385 (398)
Q Consensus 313 ~vl~g~~i~fSg~~~~~-----~~~l~~la~~lGa~~~~~~~~~v--THlVa~~~~t~K~~~A~~~gi~IV~~~WL~~c~ 385 (398)
.+|+|..+.+..-.... ...|.+++...||+|...+.++. -+.|.+.-++. +.+.|+|..|.+|+
T Consensus 10 ~vF~g~~Fyin~d~~a~ds~~d~d~L~~lI~~nGG~Vl~~lP~~s~~~~yVVSpyN~t--------~LpTVtpTYI~aC~ 81 (106)
T 2l42_A 10 PPLSNMKFYLNRDADAHDSLNDIDQLARLIRANGGEVLDSKPRESKENVFIVSPYNHT--------NLPTVTPTYIKACC 81 (106)
T ss_dssp CSSCCCCBEECCSSSCSSCSSTHHHHHHHHHTTTSCCCEECCCCCSSCCCCBCTTCCC--------SSSBCCTTHHHHHH
T ss_pred ccccCcEEEEcCCCccchhhhHHHHHHHHHHhcCcEEhhhCcccccCCeEEEeCCCCC--------CCccccHHHHHHHH
Confidence 46999999988754432 24899999999999998887544 35555554433 68999999999999
Q ss_pred HhcCcCCCCCCCC
Q 039039 386 FLWCRQPNDVSFF 398 (398)
Q Consensus 386 ~~~~r~~E~~Y~~ 398 (398)
...+.++-.+|++
T Consensus 82 ~~nTLLnv~~YLv 94 (106)
T 2l42_A 82 QSNSLLNMENYLV 94 (106)
T ss_dssp HSTTSCGGGGCCB
T ss_pred hcCceeccccccc
Confidence 9999999999974
No 138
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=95.22 E-value=0.053 Score=50.88 Aligned_cols=84 Identities=11% Similarity=0.089 Sum_probs=60.0
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEeCC
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVDDT 231 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiDD~ 231 (398)
..++||+.++|+.+. +.+.+.|.|++.+.++..+++.++... +|.. ++ .....+-++++... +.+++|.|+
T Consensus 162 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~-i~-----~~~K~~~~~~l~~~-~~~~~vGDs 233 (287)
T 3a1c_A 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-VIAE-VL-----PHQKSEEVKKLQAK-EVVAFVGDG 233 (287)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-EECS-CC-----TTCHHHHHHHHTTT-CCEEEEECT
T ss_pred cccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce-eeee-cC-----hHHHHHHHHHHhcC-CeEEEEECC
Confidence 368899999999995 579999999999999999999997654 5632 22 11223445566666 899999998
Q ss_pred cccccCCCCceEE
Q 039039 232 ESVWGGRVENLIT 244 (398)
Q Consensus 232 ~~vw~~~~~N~I~ 244 (398)
..-.......++.
T Consensus 234 ~~Di~~a~~ag~~ 246 (287)
T 3a1c_A 234 INDAPALAQADLG 246 (287)
T ss_dssp TTCHHHHHHSSEE
T ss_pred HHHHHHHHHCCee
Confidence 7433332233454
No 139
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=95.16 E-value=0.014 Score=53.67 Aligned_cols=92 Identities=15% Similarity=-0.008 Sum_probs=66.5
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
+.+.||+.++|+.+. +.+.++|.|++.+. +..+++.++... +| +.+++.++... .+.+-+++++.+++.+
T Consensus 105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~-~f-~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~ 181 (263)
T 3k1z_A 105 WQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLRE-HF-DFVLTSEAAGWPKPDPRIFQEALRLAHMEPVVA 181 (263)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGG-GC-SCEEEHHHHSSCTTSHHHHHHHHHHHTCCGGGE
T ss_pred ceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHH-hh-hEEEeecccCCCCCCHHHHHHHHHHcCCCHHHE
Confidence 578899999999995 56999999998874 688888888664 78 55776665432 2444556666788999
Q ss_pred EEEeCCc--ccccCCCCceEEeCcc
Q 039039 226 VIVDDTE--SVWGGRVENLITVGSY 248 (398)
Q Consensus 226 vIiDD~~--~vw~~~~~N~I~I~~y 248 (398)
++|+|++ ++-.. ...++.+.-+
T Consensus 182 ~~vGD~~~~Di~~a-~~aG~~~i~~ 205 (263)
T 3k1z_A 182 AHVGDNYLCDYQGP-RAVGMHSFLV 205 (263)
T ss_dssp EEEESCHHHHTHHH-HTTTCEEEEE
T ss_pred EEECCCcHHHHHHH-HHCCCEEEEE
Confidence 9999996 34433 3455554433
No 140
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=95.14 E-value=0.016 Score=51.42 Aligned_cols=88 Identities=11% Similarity=0.071 Sum_probs=60.8
Q ss_pred eCccHHHHHHHhhc-cccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcEEE
Q 039039 155 LRPFVRSFLEEASR-LFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSIVI 227 (398)
Q Consensus 155 lRPgl~eFL~~~s~-~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~vvI 227 (398)
+.||+.++|+.+.+ .+.++|.|++.+ +..+++.++..+ +| +.+++.++... .+.+-+++++.+++.+++
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~-~f-~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~ 168 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIID-DF-HAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAA 168 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTT-TC-SEECCC---------CCHHHHHHHHHTSCGGGEEE
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHh-hc-CEEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEE
Confidence 68999999999965 599999999866 888899888765 78 45666665432 234455666678899999
Q ss_pred EeCCcccccCCCCceEEeC
Q 039039 228 VDDTESVWGGRVENLITVG 246 (398)
Q Consensus 228 iDD~~~vw~~~~~N~I~I~ 246 (398)
|+|++.-.......++.+.
T Consensus 169 vGDs~~Di~~a~~aG~~~~ 187 (233)
T 3nas_A 169 IEDAEAGISAIKSAGMFAV 187 (233)
T ss_dssp EECSHHHHHHHHHTTCEEE
T ss_pred EeCCHHHHHHHHHcCCEEE
Confidence 9999843333233444443
No 141
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=95.09 E-value=0.021 Score=50.31 Aligned_cols=76 Identities=11% Similarity=0.031 Sum_probs=59.0
Q ss_pred eCccHHHHHHHhh-ccccEEEEcCCc---HHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCc
Q 039039 155 LRPFVRSFLEEAS-RLFEISVCTMGN---REYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESS 224 (398)
Q Consensus 155 lRPgl~eFL~~~s-~~yEi~I~T~g~---~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~ 224 (398)
..|++.++|+.+. ..+.++|.|++. +.++..+++.++... +| +.+++.++... .+.+-+++++.+++.
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~-~f-~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 177 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLME-FI-DKTFFADEVLSYKPRKEMFEKVLNSFEVKPEE 177 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGG-GC-SEEEEHHHHTCCTTCHHHHHHHHHHTTCCGGG
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHH-Hh-hhheeccccCCCCCCHHHHHHHHHHcCCCccc
Confidence 4899999999995 459999999999 999999999987765 78 45666554332 223345566668899
Q ss_pred EEEEeCCc
Q 039039 225 IVIVDDTE 232 (398)
Q Consensus 225 vvIiDD~~ 232 (398)
++.|+|++
T Consensus 178 ~~~iGD~~ 185 (235)
T 2om6_A 178 SLHIGDTY 185 (235)
T ss_dssp EEEEESCT
T ss_pred eEEECCCh
Confidence 99999998
No 142
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=95.02 E-value=0.016 Score=52.12 Aligned_cols=89 Identities=6% Similarity=-0.007 Sum_probs=65.1
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcEE
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSIV 226 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~vv 226 (398)
..+.|++.++|+.+.+.+.++|.|++.+.++..+++.++.. | +.+++.++... .+.+-+++++.+++.++
T Consensus 119 ~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~---f-~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~ 194 (254)
T 3umc_A 119 LRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP---W-DMLLCADLFGHYKPDPQVYLGACRLLDLPPQEVM 194 (254)
T ss_dssp CEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC---C-SEECCHHHHTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred CCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC---c-ceEEeecccccCCCCHHHHHHHHHHcCCChHHEE
Confidence 46789999999999777999999999999999999998754 6 55666654332 23344566667889999
Q ss_pred EEeCCcccccCCCCceEEe
Q 039039 227 IVDDTESVWGGRVENLITV 245 (398)
Q Consensus 227 IiDD~~~vw~~~~~N~I~I 245 (398)
.|+|+..-.......++.+
T Consensus 195 ~iGD~~~Di~~a~~aG~~~ 213 (254)
T 3umc_A 195 LCAAHNYDLKAARALGLKT 213 (254)
T ss_dssp EEESCHHHHHHHHHTTCEE
T ss_pred EEcCchHhHHHHHHCCCeE
Confidence 9999984333323334444
No 143
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=95.01 E-value=0.016 Score=52.36 Aligned_cols=91 Identities=12% Similarity=0.047 Sum_probs=63.3
Q ss_pred EEeCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCC----------C--c--cc-----
Q 039039 153 VKLRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFK----------Q--K--ER----- 212 (398)
Q Consensus 153 vklRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~----------~--~--~~----- 212 (398)
+.++||+.++|+.+ .+.|.++|.|++.+.++..+++-| .+ | +.+++.+... . . ..
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~~l--~~--~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~~~~~ 150 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI--VE--K-DRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGC 150 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTT--SC--G-GGEEEEEEECSSSBCEEECTTCCCTTCCSCCSS
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHhcC--CC--C-CeEEeeeeEEcCCceEEecCCCCccccccccCC
Confidence 57899999999999 467999999999999999999832 22 3 4566554321 0 0 11
Q ss_pred ---cccccccCCCCcEEEEeCCcccccCCCCceEEeCcc
Q 039039 213 ---KCLDLVLGQESSIVIVDDTESVWGGRVENLITVGSY 248 (398)
Q Consensus 213 ---K~L~~l~~~~~~vvIiDD~~~vw~~~~~N~I~I~~y 248 (398)
+-++++..+++.+++|+|+..-.......++.+..+
T Consensus 151 ~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~ 189 (236)
T 2fea_A 151 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD 189 (236)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH
T ss_pred cHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeech
Confidence 445556667889999999985443334556666433
No 144
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=94.84 E-value=0.046 Score=47.72 Aligned_cols=91 Identities=11% Similarity=0.078 Sum_probs=64.6
Q ss_pred EEeCccHHHHHHHhhc-cccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEASR-LFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s~-~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
..+.|++.++|+.+.+ .+.++|.|++.+.++..+++.++... +| +.+++.++... .+.+-++.++.+++.+
T Consensus 93 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~-~~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~ 170 (226)
T 1te2_A 93 RPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD-SF-DALASAEKLPYSKPHPQVYLDCAAKLGVDPLTC 170 (226)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG-GC-SEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGE
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHh-hC-cEEEeccccCCCCCChHHHHHHHHHcCCCHHHe
Confidence 4678999999999954 69999999999999999999987664 67 44666665432 1222334555678899
Q ss_pred EEEeCCcccccCCCCceEEe
Q 039039 226 VIVDDTESVWGGRVENLITV 245 (398)
Q Consensus 226 vIiDD~~~vw~~~~~N~I~I 245 (398)
+.|+|+..-.......++.+
T Consensus 171 i~iGD~~nDi~~a~~aG~~~ 190 (226)
T 1te2_A 171 VALEDSVNGMIASKAARMRS 190 (226)
T ss_dssp EEEESSHHHHHHHHHTTCEE
T ss_pred EEEeCCHHHHHHHHHcCCEE
Confidence 99999985443323334444
No 145
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=94.78 E-value=0.047 Score=47.58 Aligned_cols=91 Identities=16% Similarity=0.132 Sum_probs=64.3
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
+.+.|++.++|+.+. ..+.++|.|++.+.++..+++.++... +| +.+++.++... .+.+-+++++.+++.+
T Consensus 88 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 165 (225)
T 3d6j_A 88 TILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDD-WF-DIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEV 165 (225)
T ss_dssp CEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTT-CC-SEEECGGGCSSCTTSTHHHHHHHHHTTCCGGGE
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchh-he-eeeeehhhcCCCCCChHHHHHHHHHhCCChHHe
Confidence 457899999999995 569999999999999999999887654 67 45666655432 1223344555678899
Q ss_pred EEEeCCcccccCCCCceEEe
Q 039039 226 VIVDDTESVWGGRVENLITV 245 (398)
Q Consensus 226 vIiDD~~~vw~~~~~N~I~I 245 (398)
+.|+|+..-.......++.+
T Consensus 166 i~iGD~~nDi~~~~~aG~~~ 185 (225)
T 3d6j_A 166 LYIGDSTVDAGTAAAAGVSF 185 (225)
T ss_dssp EEEESSHHHHHHHHHHTCEE
T ss_pred EEEcCCHHHHHHHHHCCCeE
Confidence 99999985443323334433
No 146
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=94.74 E-value=0.042 Score=47.01 Aligned_cols=81 Identities=21% Similarity=0.118 Sum_probs=59.7
Q ss_pred EEeCccHHHHHHHhhc-cccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEASR-LFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s~-~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
...+|++.++|+.+.+ .+.++|+|++.+.++. +++.++... +| +.+++.++... .+.+-+++++.+++.+
T Consensus 84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~-~f-~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~~~~ 160 (207)
T 2go7_A 84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVES-YF-TEILTSQSGFVRKPSPEAATYLLDKYQLNSDNT 160 (207)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGG-GE-EEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchh-he-eeEEecCcCCCCCCCcHHHHHHHHHhCCCcccE
Confidence 4678999999999955 5999999999999999 998887664 67 45665554332 1122234455678899
Q ss_pred EEEeCCccccc
Q 039039 226 VIVDDTESVWG 236 (398)
Q Consensus 226 vIiDD~~~vw~ 236 (398)
+.|+|+..-..
T Consensus 161 ~~iGD~~nDi~ 171 (207)
T 2go7_A 161 YYIGDRTLDVE 171 (207)
T ss_dssp EEEESSHHHHH
T ss_pred EEECCCHHHHH
Confidence 99999985443
No 147
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=94.47 E-value=0.06 Score=50.16 Aligned_cols=24 Identities=8% Similarity=-0.022 Sum_probs=18.6
Q ss_pred eCccHHHHHHHhhc--cccEEEEcCC
Q 039039 155 LRPFVRSFLEEASR--LFEISVCTMG 178 (398)
Q Consensus 155 lRPgl~eFL~~~s~--~yEi~I~T~g 178 (398)
.+|++.++|+.+.+ .+.+.+.|..
T Consensus 123 ~~~~v~e~l~~l~~~~g~~l~~~t~~ 148 (289)
T 3gyg_A 123 SKEKVEKLVKQLHENHNILLNPQTQL 148 (289)
T ss_dssp CHHHHHHHHHHHHHHSSCCCEEGGGT
T ss_pred CHHHHHHHHHHHHhhhCceeeecccc
Confidence 56899999999965 4556788876
No 148
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=94.44 E-value=0.016 Score=51.83 Aligned_cols=89 Identities=9% Similarity=0.007 Sum_probs=63.4
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcEE
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSIV 226 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~vv 226 (398)
+...|++.++|+.+.+.+.++|.|++.+.++..+++.++.. | +.+++.++... .+.+-+++++.+++.++
T Consensus 115 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~---f-~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~ 190 (254)
T 3umg_A 115 LTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP---W-DVIIGSDINRKYKPDPQAYLRTAQVLGLHPGEVM 190 (254)
T ss_dssp CCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC---C-SCCCCHHHHTCCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred CcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC---e-eEEEEcCcCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 46689999999999666999999999999999999998653 5 44555554332 23344556666889999
Q ss_pred EEeCCcccccCCCCceEEe
Q 039039 227 IVDDTESVWGGRVENLITV 245 (398)
Q Consensus 227 IiDD~~~vw~~~~~N~I~I 245 (398)
.|+|+..-.......++.+
T Consensus 191 ~iGD~~~Di~~a~~aG~~~ 209 (254)
T 3umg_A 191 LAAAHNGDLEAAHATGLAT 209 (254)
T ss_dssp EEESCHHHHHHHHHTTCEE
T ss_pred EEeCChHhHHHHHHCCCEE
Confidence 9999984433323334443
No 149
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=94.18 E-value=0.0087 Score=56.51 Aligned_cols=88 Identities=10% Similarity=0.008 Sum_probs=56.4
Q ss_pred EEeCccHHHHHHHh-hccccEEEEcCCcHHHHH---HHHHH--------hCCCCCccceeEEEccCCCC-----cccccc
Q 039039 153 VKLRPFVRSFLEEA-SRLFEISVCTMGNREYAT---RAVKL--------LDPDCKYFNSRIITREDFKQ-----KERKCL 215 (398)
Q Consensus 153 vklRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~---~il~~--------LDP~~~~F~~ri~srd~~~~-----~~~K~L 215 (398)
..+.||+.++|+.+ .+.+.+.|.|+..+.+++ .+++. ++. +| +.++++++... .+.+-+
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~---~~-~~~~~~~~~~~kp~p~~~~~~~ 262 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV---PL-VMQCQREQGDTRKDDVVKEEIF 262 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC---CC-SEEEECCTTCCSCHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC---Cc-hheeeccCCCCcHHHHHHHHHH
Confidence 35679999999999 567999999999988774 44555 443 46 45676765422 112223
Q ss_pred ccccCCC-CcEEEEeCCcccccCCCCceEE
Q 039039 216 DLVLGQE-SSIVIVDDTESVWGGRVENLIT 244 (398)
Q Consensus 216 ~~l~~~~-~~vvIiDD~~~vw~~~~~N~I~ 244 (398)
.++.... +.+++|+|++........++++
T Consensus 263 ~~~~~~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 263 WKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp HHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred HHHhccccceEEEeCCcHHHHHHHHHcCCe
Confidence 4443333 4468899998655443344544
No 150
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=94.17 E-value=0.076 Score=49.05 Aligned_cols=89 Identities=18% Similarity=0.072 Sum_probs=64.9
Q ss_pred EEeCccHHHHHHHhhc--cccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccC----
Q 039039 153 VKLRPFVRSFLEEASR--LFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLG---- 220 (398)
Q Consensus 153 vklRPgl~eFL~~~s~--~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~---- 220 (398)
..+.||+.++|+.+.+ .+.+.|.|++.+.++..+++.++.. .| +.+++.++... .+.+-+++++.
T Consensus 113 ~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~--~f-~~i~~~~~~~~~kp~~~~~~~~~~~lgi~~~~ 189 (275)
T 2qlt_A 113 SIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK--RP-EYFITANDVKQGKPHPEPYLKGRNGLGFPINE 189 (275)
T ss_dssp CEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC--CC-SSEECGGGCSSCTTSSHHHHHHHHHTTCCCCS
T ss_pred CCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC--cc-CEEEEcccCCCCCCChHHHHHHHHHcCCCccc
Confidence 4678999999999965 5999999999999999999998765 36 45776665432 23334455666
Q ss_pred ---CCCcEEEEeCCcccccCCCCceEE
Q 039039 221 ---QESSIVIVDDTESVWGGRVENLIT 244 (398)
Q Consensus 221 ---~~~~vvIiDD~~~vw~~~~~N~I~ 244 (398)
+++.++.|+|++.-.......++.
T Consensus 190 ~~~~~~~~i~~GDs~nDi~~a~~AG~~ 216 (275)
T 2qlt_A 190 QDPSKSKVVVFEDAPAGIAAGKAAGCK 216 (275)
T ss_dssp SCGGGSCEEEEESSHHHHHHHHHTTCE
T ss_pred cCCCcceEEEEeCCHHHHHHHHHcCCE
Confidence 788999999998544333334443
No 151
>3oq4_A DBF4, protein DNA52; DDK, BRCT, RAD53, replication checkpoint, FHA domain, regula subunit of DDK, CDC7, phosphorylation, nuclear; 2.40A {Saccharomyces cerevisiae}
Probab=94.16 E-value=0.16 Score=42.60 Aligned_cols=68 Identities=18% Similarity=0.100 Sum_probs=50.6
Q ss_pred ceeEEecCCCCCC------------chhhHHHHHHhCCEEeeecCCCccEEEECCCC--------CHHHHHHHhCCCeee
Q 039039 317 GCTILFGDDDFEE------------LPLTWSRAEEMGAICTLVTDASITHVVSSNTQ--------SETFEWAEQENKCLV 376 (398)
Q Consensus 317 g~~i~fSg~~~~~------------~~~l~~la~~lGa~~~~~~~~~vTHlVa~~~~--------t~K~~~A~~~gi~IV 376 (398)
..+|.|-+..+.. ...+.+-...+||+|..-++.+|||+|+.++. +.-...|++.|++|=
T Consensus 7 ~s~iyfd~~~~~~~~~~~~~k~~k~~~llk~~f~~LGa~I~~FFd~~VTiiITrR~~~~~~~~p~~DIL~rAr~~~mKIW 86 (134)
T 3oq4_A 7 DSRIYFDITDDVEMNTYNKSKMDKRRDLLKRGFLTLGAQITQFFDTTVTIVITRRSVENIYLLKDTDILSRAKKNYMKVW 86 (134)
T ss_dssp TCEEEECCCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCEEESSCCTTCCEEEESSCGGGGGGSCTTSHHHHHHHTTCEEE
T ss_pred cceEEecCCchHHHHHHHHHhhHHHHHHHHHHHHHcCCEEeeecCCceEEEEeCCcCcccccCCcchHHHHHHHcCCeee
Confidence 4467777765442 12556677899999999999999999998743 334678999999997
Q ss_pred ChhHHHHH
Q 039039 377 HPQWINDA 384 (398)
Q Consensus 377 ~~~WL~~c 384 (398)
+.+=+..=
T Consensus 87 s~EKl~Rf 94 (134)
T 3oq4_A 87 SYEKAARF 94 (134)
T ss_dssp EHHHHHHH
T ss_pred eHHHHHHH
Confidence 77666543
No 152
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=94.11 E-value=0.071 Score=48.18 Aligned_cols=38 Identities=18% Similarity=0.087 Sum_probs=30.9
Q ss_pred ccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCCC
Q 039039 157 PFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPDC 194 (398)
Q Consensus 157 Pgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~~ 194 (398)
|...+.|+++ .+...+++.|.-+...+..+++.++...
T Consensus 23 ~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~ 61 (231)
T 1wr8_A 23 EKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG 61 (231)
T ss_dssp HHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC
Confidence 6677888887 5788899999888888888888887654
No 153
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=93.84 E-value=0.051 Score=49.33 Aligned_cols=40 Identities=8% Similarity=-0.042 Sum_probs=33.6
Q ss_pred eCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCCC
Q 039039 155 LRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPDC 194 (398)
Q Consensus 155 lRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~~ 194 (398)
+.|...+.|+++ .+.+.++|.|.-+...+..+++.++..+
T Consensus 23 i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~ 63 (227)
T 1l6r_A 23 ISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING 63 (227)
T ss_dssp BCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC
Confidence 347788999998 5679999999999999999999887654
No 154
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=93.79 E-value=0.019 Score=53.48 Aligned_cols=88 Identities=8% Similarity=0.053 Sum_probs=61.9
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHh--C---------CCCCccceeEEEccCCCC-----ccccccc
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLL--D---------PDCKYFNSRIITREDFKQ-----KERKCLD 216 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~L--D---------P~~~~F~~ri~srd~~~~-----~~~K~L~ 216 (398)
+.+.||+.++|++ .|.+.|.|++.+..+..+++.. . .. .+| ..+|...-++. .+.+-++
T Consensus 124 ~~~~pgv~e~L~~---g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~-~~~-~~~f~~~~~g~KP~p~~~~~a~~ 198 (253)
T 2g80_A 124 APVYADAIDFIKR---KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLN-SYI-DGYFDINTSGKKTETQSYANILR 198 (253)
T ss_dssp BCCCHHHHHHHHH---CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCG-GGC-CEEECHHHHCCTTCHHHHHHHHH
T ss_pred CCCCCCHHHHHHc---CCEEEEEeCCCHHHHHHHHHhhcccccccccccchH-hhc-ceEEeeeccCCCCCHHHHHHHHH
Confidence 5678999999999 8999999999999999999876 2 22 245 33443221011 3566677
Q ss_pred cccCCCCcEEEEeCCcccccCCCCceEEe
Q 039039 217 LVLGQESSIVIVDDTESVWGGRVENLITV 245 (398)
Q Consensus 217 ~l~~~~~~vvIiDD~~~vw~~~~~N~I~I 245 (398)
+++.+++.+++|+|++.-.......+++.
T Consensus 199 ~lg~~p~~~l~vgDs~~di~aA~~aG~~~ 227 (253)
T 2g80_A 199 DIGAKASEVLFLSDNPLELDAAAGVGIAT 227 (253)
T ss_dssp HHTCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred HcCCCcccEEEEcCCHHHHHHHHHcCCEE
Confidence 77778899999999985443333445443
No 155
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=93.77 E-value=0.033 Score=50.24 Aligned_cols=90 Identities=9% Similarity=0.072 Sum_probs=60.7
Q ss_pred EEeCccHHHHHHHhhc-cccEEEEcCCcHHHHHHHHHH-hCCCCCccceeEEEcc--CCCC------ccccccccccCCC
Q 039039 153 VKLRPFVRSFLEEASR-LFEISVCTMGNREYATRAVKL-LDPDCKYFNSRIITRE--DFKQ------KERKCLDLVLGQE 222 (398)
Q Consensus 153 vklRPgl~eFL~~~s~-~yEi~I~T~g~~~YA~~il~~-LDP~~~~F~~ri~srd--~~~~------~~~K~L~~l~~~~ 222 (398)
..+.||+.++|+.+.+ .+.++|.|++.+.++...+.. ++.. .+| +.+++.+ +... .+.+-+++++.++
T Consensus 111 ~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~-~~f-~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~ 188 (250)
T 3l5k_A 111 AALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFF-SLF-SHIVLGDDPEVQHGKPDPDIFLACAKRFSPPP 188 (250)
T ss_dssp CCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHH-TTS-SCEECTTCTTCCSCTTSTHHHHHHHHTSSSCC
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHH-hhe-eeEEecchhhccCCCCChHHHHHHHHHcCCCC
Confidence 5688999999999954 599999999998887766532 2222 367 4566666 4332 2344455666566
Q ss_pred --CcEEEEeCCcccccCCCCceEE
Q 039039 223 --SSIVIVDDTESVWGGRVENLIT 244 (398)
Q Consensus 223 --~~vvIiDD~~~vw~~~~~N~I~ 244 (398)
+.++.|+|+..-.......++.
T Consensus 189 ~~~~~i~iGD~~~Di~~a~~aG~~ 212 (250)
T 3l5k_A 189 AMEKCLVFEDAPNGVEAALAAGMQ 212 (250)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCE
T ss_pred CcceEEEEeCCHHHHHHHHHcCCE
Confidence 9999999998544333344543
No 156
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=93.67 E-value=0.098 Score=44.62 Aligned_cols=86 Identities=13% Similarity=0.014 Sum_probs=58.5
Q ss_pred eCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcEEE
Q 039039 155 LRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSIVI 227 (398)
Q Consensus 155 lRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~vvI 227 (398)
..|++.++|+.+. +.+.++|.|++. .++..+++.++... +| +.+++.++... .+.+-+++++.+ .++.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~-~~~~~~l~~~~~~~-~f-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~~~~ 157 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRN-DQVLEILEKTSIAA-YF-TEVVTSSSGFKRKPNPESMLYLREKYQIS--SGLV 157 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHTTCGG-GE-EEEECGGGCCCCTTSCHHHHHHHHHTTCS--SEEE
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCc-HHHHHHHHHcCCHh-he-eeeeeccccCCCCCCHHHHHHHHHHcCCC--eEEE
Confidence 7899999999995 469999999886 47888998887664 67 55676665432 122223344434 8999
Q ss_pred EeCCcccccCCCCceEEe
Q 039039 228 VDDTESVWGGRVENLITV 245 (398)
Q Consensus 228 iDD~~~vw~~~~~N~I~I 245 (398)
|+|++.-.......++.+
T Consensus 158 iGD~~~Di~~a~~aG~~~ 175 (190)
T 2fi1_A 158 IGDRPIDIEAGQAAGLDT 175 (190)
T ss_dssp EESSHHHHHHHHHTTCEE
T ss_pred EcCCHHHHHHHHHcCCeE
Confidence 999985443323334443
No 157
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=93.58 E-value=0.12 Score=50.58 Aligned_cols=66 Identities=20% Similarity=0.173 Sum_probs=49.7
Q ss_pred CceEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEEeCccHHHHHHHh-hccc
Q 039039 92 RKLHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEA-SRLF 170 (398)
Q Consensus 92 ~Kl~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vklRPgl~eFL~~~-s~~y 170 (398)
++..++||+||||++... .=||+.++|+.+ +..+
T Consensus 12 ~~~~~l~D~DGvl~~g~~---------------------------------------------~~p~a~~~l~~l~~~g~ 46 (352)
T 3kc2_A 12 KKIAFAFDIDGVLFRGKK---------------------------------------------PIAGASDALKLLNRNKI 46 (352)
T ss_dssp CCEEEEECCBTTTEETTE---------------------------------------------ECTTHHHHHHHHHHTTC
T ss_pred cCCEEEEECCCeeEcCCe---------------------------------------------eCcCHHHHHHHHHHCCC
Confidence 677899999999998642 119999999999 5789
Q ss_pred cEEEEcCCc----HHHHHHHHHHhCCCCCccceeEEEc
Q 039039 171 EISVCTMGN----REYATRAVKLLDPDCKYFNSRIITR 204 (398)
Q Consensus 171 Ei~I~T~g~----~~YA~~il~~LDP~~~~F~~ri~sr 204 (398)
.+.+.|+++ +.+|+.+.+.++-.- =.+.|++.
T Consensus 47 ~~~~vTNn~~~~~~~~~~~l~~~lgi~~--~~~~i~ts 82 (352)
T 3kc2_A 47 PYILLTNGGGFSERARTEFISSKLDVDV--SPLQIIQS 82 (352)
T ss_dssp CEEEECSCCSSCHHHHHHHHHHHHTSCC--CGGGEECT
T ss_pred EEEEEeCCCCCCchHHHHHHHHhcCCCC--ChhhEeeh
Confidence 999999875 788888887665431 12446643
No 158
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=93.52 E-value=0.1 Score=48.12 Aligned_cols=37 Identities=14% Similarity=0.124 Sum_probs=28.8
Q ss_pred ccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCC
Q 039039 157 PFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPD 193 (398)
Q Consensus 157 Pgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~ 193 (398)
|...+.|+++ .+...+++.|.-...-+..+++.++..
T Consensus 25 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 62 (279)
T 3mpo_A 25 QATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDID 62 (279)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 5566777777 567888888888888888888888765
No 159
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=93.47 E-value=0.038 Score=49.56 Aligned_cols=78 Identities=13% Similarity=0.008 Sum_probs=55.3
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEeCCc
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVDDTE 232 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiDD~~ 232 (398)
+.+.||+.++|+.+.+...++|.|++.+.++..+++.++... +|...+... .......+.+.. ..+++.+++|+|++
T Consensus 95 ~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~-~f~~~~~~~-~~K~~~~~~~~~-~~~~~~~~~vgDs~ 171 (231)
T 2p11_A 95 SRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWD-EVEGRVLIY-IHKELMLDQVME-CYPARHYVMVDDKL 171 (231)
T ss_dssp GGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHH-HTTTCEEEE-SSGGGCHHHHHH-HSCCSEEEEECSCH
T ss_pred CCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHH-hcCeeEEec-CChHHHHHHHHh-cCCCceEEEEcCcc
Confidence 468899999999996555999999999999999999987654 674433211 111112222222 34778999999998
Q ss_pred c
Q 039039 233 S 233 (398)
Q Consensus 233 ~ 233 (398)
.
T Consensus 172 ~ 172 (231)
T 2p11_A 172 R 172 (231)
T ss_dssp H
T ss_pred c
Confidence 5
No 160
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=93.41 E-value=0.038 Score=45.63 Aligned_cols=26 Identities=35% Similarity=0.172 Sum_probs=19.9
Q ss_pred eCccHHHHHHHh-hccccEEEEcCCcH
Q 039039 155 LRPFVRSFLEEA-SRLFEISVCTMGNR 180 (398)
Q Consensus 155 lRPgl~eFL~~~-s~~yEi~I~T~g~~ 180 (398)
+.|+..+.|+++ .+.+.++|.|.-..
T Consensus 25 ~~~~~~~~l~~l~~~Gi~~~iaTGR~~ 51 (126)
T 1xpj_A 25 PRLDVIEQLREYHQLGFEIVISTARNM 51 (126)
T ss_dssp BCHHHHHHHHHHHHTTCEEEEEECTTT
T ss_pred CCHHHHHHHHHHHhCCCeEEEEeCCCh
Confidence 457888888888 56788888886654
No 161
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=93.31 E-value=0.042 Score=47.94 Aligned_cols=147 Identities=10% Similarity=-0.000 Sum_probs=78.9
Q ss_pred ceEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEEeCccHHHHHHHh-hcccc
Q 039039 93 KLHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEA-SRLFE 171 (398)
Q Consensus 93 Kl~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vklRPgl~eFL~~~-s~~yE 171 (398)
-..||+|+||||+..... +++ + ... .-.+.+|.+. .|+.+ ...+.
T Consensus 9 ikliv~D~DGtL~d~~~~--~~~------------------~---g~~---------~~~f~~~D~~--~L~~Lk~~Gi~ 54 (168)
T 3ewi_A 9 IKLLVCNIDGCLTNGHIY--VSG------------------D---QKE---------IISYDVKDAI--GISLLKKSGIE 54 (168)
T ss_dssp CCEEEEECCCCCSCSCCB--CCS------------------S---CCC---------EEEEEHHHHH--HHHHHHHTTCE
T ss_pred CcEEEEeCccceECCcEE--EcC------------------C---CCE---------EEEEecCcHH--HHHHHHHCCCE
Confidence 447899999999987532 111 0 000 1223455553 57787 56799
Q ss_pred EEEEcCCcHHHHHHHHH--HhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEeCCcccccCCCCceEEeCccc
Q 039039 172 ISVCTMGNREYATRAVK--LLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVDDTESVWGGRVENLITVGSYD 249 (398)
Q Consensus 172 i~I~T~g~~~YA~~il~--~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiDD~~~vw~~~~~N~I~I~~y~ 249 (398)
+.|-|+. ..+..+++ .++.. +|.. ..+-.....+-++++..+++.++.|-|+..=.+.-...++.+.+-+
T Consensus 55 ~~I~Tg~--~~~~~~l~~l~lgi~--~~~g----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~n 126 (168)
T 3ewi_A 55 VRLISER--ACSKQTLSALKLDCK--TEVS----VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPAD 126 (168)
T ss_dssp EEEECSS--CCCHHHHHTTCCCCC--EECS----CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTT
T ss_pred EEEEeCc--HHHHHHHHHhCCCcE--EEEC----CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCC
Confidence 9999988 78889998 45443 3311 1110001112223444577899999998854443334456665533
Q ss_pred cccCCCCCCCccccccccCCCcchHHHHHHHHHHHHH
Q 039039 250 FFKGKKKNDCKSYSEQMSDESESDGALANILRALKAV 286 (398)
Q Consensus 250 ff~~~~~~~~~sl~~~~~d~~~~D~~L~~l~~~L~~i 286 (398)
+....+..+...-..+..|+.+..+.+.+...
T Consensus 127 -----a~~~~k~~Ad~v~~~~~~~G~~~~~~~~il~~ 158 (168)
T 3ewi_A 127 -----ACSGAQKAVGYICKCSGGRGAIREFAEHIFLL 158 (168)
T ss_dssp -----CCHHHHTTCSEECSSCTTTTHHHHHHHHHHHH
T ss_pred -----hhHHHHHhCCEEeCCCCCccHHHHHHHHHHHh
Confidence 00000111111122345566676666665543
No 162
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=93.29 E-value=0.053 Score=54.05 Aligned_cols=79 Identities=16% Similarity=0.095 Sum_probs=59.5
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCC------cHHHHHHHHHHhCCCCCccceeEEEccCCCC------cccccccccc
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMG------NREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVL 219 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g------~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~ 219 (398)
+.+.||+.++|+.+. +.|.++|.|++ .+......+.-|+ .+| +.+++.++... .+.+-+++++
T Consensus 99 ~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~---~~f-d~i~~~~~~~~~KP~p~~~~~~~~~lg 174 (555)
T 3i28_A 99 RKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELK---MHF-DFLIESCQVGMVKPEPQIYKFLLDTLK 174 (555)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHH---TTS-SEEEEHHHHTCCTTCHHHHHHHHHHHT
T ss_pred cCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhh---hhe-eEEEeccccCCCCCCHHHHHHHHHHcC
Confidence 478899999999995 45999999999 6666665554443 378 55777766543 4566777777
Q ss_pred CCCCcEEEEeCCcccc
Q 039039 220 GQESSIVIVDDTESVW 235 (398)
Q Consensus 220 ~~~~~vvIiDD~~~vw 235 (398)
.+++.+++|||+..-.
T Consensus 175 ~~p~~~~~v~D~~~di 190 (555)
T 3i28_A 175 ASPSEVVFLDDIGANL 190 (555)
T ss_dssp CCGGGEEEEESCHHHH
T ss_pred CChhHEEEECCcHHHH
Confidence 8889999999998533
No 163
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=93.15 E-value=0.057 Score=47.48 Aligned_cols=81 Identities=15% Similarity=0.126 Sum_probs=60.4
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC--------ccccccccccCCCCc
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ--------KERKCLDLVLGQESS 224 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~--------~~~K~L~~l~~~~~~ 224 (398)
+.+.|++.++|+.+.. .++|.|++.+.++..+++.++... +|.+.+++.++... .+.+-+++++.+++.
T Consensus 86 ~~~~~~~~~~l~~l~~--~~~i~s~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~ 162 (229)
T 2fdr_A 86 VKIIDGVKFALSRLTT--PRCICSNSSSHRLDMMLTKVGLKP-YFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDR 162 (229)
T ss_dssp CCBCTTHHHHHHHCCS--CEEEEESSCHHHHHHHHHHTTCGG-GTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGG
T ss_pred CccCcCHHHHHHHhCC--CEEEEECCChhHHHHHHHhCChHH-hccceEEeccccccCCCCcCHHHHHHHHHHcCCChhH
Confidence 4678999999999875 999999999999999999987664 67455666654321 122334555667899
Q ss_pred EEEEeCCccccc
Q 039039 225 IVIVDDTESVWG 236 (398)
Q Consensus 225 vvIiDD~~~vw~ 236 (398)
++.|+|+..-..
T Consensus 163 ~i~iGD~~~Di~ 174 (229)
T 2fdr_A 163 VVVVEDSVHGIH 174 (229)
T ss_dssp EEEEESSHHHHH
T ss_pred eEEEcCCHHHHH
Confidence 999999985443
No 164
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=92.92 E-value=0.12 Score=47.46 Aligned_cols=36 Identities=8% Similarity=-0.117 Sum_probs=27.8
Q ss_pred ccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCC
Q 039039 157 PFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDP 192 (398)
Q Consensus 157 Pgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP 192 (398)
|...+.|+++ .+...+++.|.-...-+..+++.++.
T Consensus 25 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 61 (279)
T 4dw8_A 25 SRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRM 61 (279)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCC
Confidence 5667777777 56788888888888788888887764
No 165
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=92.90 E-value=0.19 Score=43.24 Aligned_cols=78 Identities=8% Similarity=0.067 Sum_probs=49.6
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCC---cHHHH--HHHHHH-hCCCCCccceeEEEccCCCCccccccccccCCCCcEE
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMG---NREYA--TRAVKL-LDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIV 226 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g---~~~YA--~~il~~-LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vv 226 (398)
+.+.||+.++|+.+.+.|.+.|.|++ .+... ...+.. ++.. .+| +.+++.++. ++ +.++
T Consensus 68 ~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~-~~~-~~i~~~~~~---------~l----~~~l 132 (180)
T 3bwv_A 68 LDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFL-DPQ-HFVFCGRKN---------II----LADY 132 (180)
T ss_dssp CCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTS-CGG-GEEECSCGG---------GB----CCSE
T ss_pred CCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCC-Ccc-cEEEeCCcC---------ee----cccE
Confidence 56889999999999777999999998 32232 333443 3322 244 667766541 12 5579
Q ss_pred EEeCCcccccCCCCceEEe
Q 039039 227 IVDDTESVWGGRVENLITV 245 (398)
Q Consensus 227 IiDD~~~vw~~~~~N~I~I 245 (398)
+|||++..........|.+
T Consensus 133 ~ieDs~~~i~~aaG~~i~~ 151 (180)
T 3bwv_A 133 LIDDNPKQLEIFEGKSIMF 151 (180)
T ss_dssp EEESCHHHHHHCSSEEEEE
T ss_pred EecCCcchHHHhCCCeEEe
Confidence 9999997443222244444
No 166
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=92.88 E-value=0.09 Score=48.97 Aligned_cols=59 Identities=22% Similarity=0.119 Sum_probs=36.3
Q ss_pred cCceEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEEeCccHHHHHHHh-hcc
Q 039039 91 MRKLHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEA-SRL 169 (398)
Q Consensus 91 ~~Kl~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vklRPgl~eFL~~~-s~~ 169 (398)
.+...+++||||||+++.. .++ |...+-|+++ .+.
T Consensus 19 ~~~kli~~DlDGTLl~~~~--~i~------------------------------------------~~~~~al~~l~~~G 54 (285)
T 3pgv_A 19 GMYQVVASDLDGTLLSPDH--FLT------------------------------------------PYAKETLKLLTARG 54 (285)
T ss_dssp --CCEEEEECCCCCSCTTS--CCC------------------------------------------HHHHHHHHHHHTTT
T ss_pred CcceEEEEeCcCCCCCCCC--cCC------------------------------------------HHHHHHHHHHHHCC
Confidence 4556789999999998753 121 3445555555 455
Q ss_pred ccEEEEcCCcHHHHHHHHHHhCCC
Q 039039 170 FEISVCTMGNREYATRAVKLLDPD 193 (398)
Q Consensus 170 yEi~I~T~g~~~YA~~il~~LDP~ 193 (398)
..++|.|.-...-+..+++.+++.
T Consensus 55 ~~v~iaTGR~~~~~~~~~~~l~~~ 78 (285)
T 3pgv_A 55 INFVFATGRHYIDVGQIRDNLGIR 78 (285)
T ss_dssp CEEEEECSSCGGGGHHHHHHHCSC
T ss_pred CEEEEEcCCCHHHHHHHHHhcCCC
Confidence 666666665555556666666554
No 167
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=92.87 E-value=0.12 Score=47.89 Aligned_cols=37 Identities=16% Similarity=0.124 Sum_probs=26.4
Q ss_pred ccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCC
Q 039039 157 PFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPD 193 (398)
Q Consensus 157 Pgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~ 193 (398)
|...+-|+++ .+...+++.|.-...-+..+++.+++.
T Consensus 26 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 63 (290)
T 3dnp_A 26 QATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLD 63 (290)
T ss_dssp HHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence 4456666666 566778888877777777788777765
No 168
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=92.77 E-value=0.17 Score=47.05 Aligned_cols=38 Identities=11% Similarity=0.056 Sum_probs=29.6
Q ss_pred ccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCCC
Q 039039 157 PFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPDC 194 (398)
Q Consensus 157 Pgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~~ 194 (398)
|...+.|+++ .+...++|.|.-+...+..+++.++.++
T Consensus 29 ~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 67 (275)
T 1xvi_A 29 QPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 67 (275)
T ss_dssp CTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence 4457788888 5678899999888888888888886554
No 169
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=92.66 E-value=0.072 Score=48.97 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=17.0
Q ss_pred ccHHHHHHHh-hccccEEEEcC
Q 039039 157 PFVRSFLEEA-SRLFEISVCTM 177 (398)
Q Consensus 157 Pgl~eFL~~~-s~~yEi~I~T~ 177 (398)
|+..++|+++ .+...+++.|+
T Consensus 24 ~~~~eal~~l~~~G~~vvl~Tn 45 (264)
T 3epr_A 24 PAGERFIERLQEKGIPYMLVTN 45 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEC
T ss_pred cCHHHHHHHHHHCCCeEEEEeC
Confidence 7888888888 67788888885
No 170
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=92.55 E-value=0.22 Score=45.47 Aligned_cols=37 Identities=8% Similarity=-0.021 Sum_probs=23.8
Q ss_pred ccHHHHHHHh-hccccEEEEcCC---cHHHHHHHHHHhCCC
Q 039039 157 PFVRSFLEEA-SRLFEISVCTMG---NREYATRAVKLLDPD 193 (398)
Q Consensus 157 Pgl~eFL~~~-s~~yEi~I~T~g---~~~YA~~il~~LDP~ 193 (398)
|+..+.|+++ .+...+++.|.. +..-....++.++..
T Consensus 27 ~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~ 67 (268)
T 3qgm_A 27 PEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLE 67 (268)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCC
T ss_pred cCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCC
Confidence 7788888888 677888888883 233333444555543
No 171
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=92.18 E-value=0.17 Score=47.16 Aligned_cols=37 Identities=16% Similarity=-0.038 Sum_probs=25.8
Q ss_pred ccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCC
Q 039039 157 PFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPD 193 (398)
Q Consensus 157 Pgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~ 193 (398)
|...+.|+++ .+...+++.|.-+...+..+++.++.+
T Consensus 24 ~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 61 (288)
T 1nrw_A 24 LENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIK 61 (288)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556666666 456778888877777777777766544
No 172
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=92.16 E-value=0.11 Score=45.24 Aligned_cols=90 Identities=10% Similarity=0.065 Sum_probs=61.7
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcE
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSI 225 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~v 225 (398)
..+.|++.++|+.+. ..+.+.|.|++ ..+..+++.++... +| +.+++.++... .+.+-+++++.+++.+
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~-~f-~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~ 165 (221)
T 2wf7_A 90 ADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTG-YF-DAIADPAEVAASKPAPDIFIAAAHAVGVAPSES 165 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGG-GC-SEECCTTTSSSCTTSSHHHHHHHHHTTCCGGGE
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHH-Hc-ceEeccccCCCCCCChHHHHHHHHHcCCChhHe
Confidence 357899999999995 46999999998 56778888887654 67 45666665432 1233345556678999
Q ss_pred EEEeCCcccccCCCCceEEeC
Q 039039 226 VIVDDTESVWGGRVENLITVG 246 (398)
Q Consensus 226 vIiDD~~~vw~~~~~N~I~I~ 246 (398)
+.|+|++.-.......++.+.
T Consensus 166 i~iGD~~nDi~~a~~aG~~~~ 186 (221)
T 2wf7_A 166 IGLEDSQAGIQAIKDSGALPI 186 (221)
T ss_dssp EEEESSHHHHHHHHHHTCEEE
T ss_pred EEEeCCHHHHHHHHHCCCEEE
Confidence 999999854433333344443
No 173
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=92.10 E-value=0.11 Score=47.09 Aligned_cols=82 Identities=18% Similarity=0.025 Sum_probs=59.2
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCC-Cc
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQE-SS 224 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~-~~ 224 (398)
....||+.++|+.+. ..+.+.|.|++.+.++..+++.++..+ +|.+.+++.++... .+.+-+++++.++ +.
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~ 180 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQG-YKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNH 180 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTT-CCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGG
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcc-cChHheecCCccCCCCCCHHHHHHHHHHhCCCCCcC
Confidence 457799999999995 569999999999999999998876554 44244555555432 1223344555567 89
Q ss_pred EEEEeCCcccc
Q 039039 225 IVIVDDTESVW 235 (398)
Q Consensus 225 vvIiDD~~~vw 235 (398)
++.|.|+..-.
T Consensus 181 ~i~iGD~~nDi 191 (267)
T 1swv_A 181 MIKVGDTVSDM 191 (267)
T ss_dssp EEEEESSHHHH
T ss_pred EEEEeCCHHHH
Confidence 99999998433
No 174
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=92.09 E-value=0.043 Score=48.39 Aligned_cols=73 Identities=29% Similarity=0.333 Sum_probs=53.6
Q ss_pred EEeCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCC------ccccccccccCCCCcEE
Q 039039 153 VKLRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQ------KERKCLDLVLGQESSIV 226 (398)
Q Consensus 153 vklRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~------~~~K~L~~l~~~~~~vv 226 (398)
+.+.||+.++|+.+.+.+.++|.|++... ++.++.. .+| +.+++.++... .+.+-+++++.+++.++
T Consensus 104 ~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~-~~f-~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~ 176 (230)
T 3vay_A 104 VQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLA-DYF-AFALCAEDLGIGKPDPAPFLEALRRAKVDASAAV 176 (230)
T ss_dssp CCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTG-GGC-SEEEEHHHHTCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred CccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcH-HHe-eeeEEccccCCCCcCHHHHHHHHHHhCCCchheE
Confidence 46889999999999766999999999876 4444444 367 55776665432 23444556667889999
Q ss_pred EEeCCc
Q 039039 227 IVDDTE 232 (398)
Q Consensus 227 IiDD~~ 232 (398)
.|+|+.
T Consensus 177 ~vGD~~ 182 (230)
T 3vay_A 177 HVGDHP 182 (230)
T ss_dssp EEESCT
T ss_pred EEeCCh
Confidence 999996
No 175
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=91.92 E-value=0.13 Score=46.93 Aligned_cols=15 Identities=33% Similarity=0.512 Sum_probs=13.0
Q ss_pred eEEEEeCCCceeeee
Q 039039 94 LHLVLDLDHTLLHSR 108 (398)
Q Consensus 94 l~LVLDLD~TLihs~ 108 (398)
..+++||||||+++.
T Consensus 4 kli~~DlDGTLl~~~ 18 (258)
T 2pq0_A 4 KIVFFDIDGTLLDEQ 18 (258)
T ss_dssp CEEEECTBTTTBCTT
T ss_pred eEEEEeCCCCCcCCC
Confidence 368999999999985
No 176
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=91.32 E-value=0.27 Score=45.31 Aligned_cols=38 Identities=13% Similarity=-0.112 Sum_probs=26.1
Q ss_pred ccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCC
Q 039039 157 PFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDC 194 (398)
Q Consensus 157 Pgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~ 194 (398)
|...+.|++..+...++|.|.-+..-+..+++.+++++
T Consensus 22 ~~~~~al~~~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~ 59 (268)
T 1nf2_A 22 EKDRRNIEKLSRKCYVVFASGRMLVSTLNVEKKYFKRT 59 (268)
T ss_dssp HHHHHHHHHHTTTSEEEEECSSCHHHHHHHHHHHSSSC
T ss_pred HHHHHHHHHHhCCCEEEEECCCChHHHHHHHHHhCCCC
Confidence 44555666634567788888877777778887777654
No 177
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=90.65 E-value=0.41 Score=43.62 Aligned_cols=20 Identities=25% Similarity=0.396 Sum_probs=15.1
Q ss_pred hhccCceEEEEeCCCceeeee
Q 039039 88 LLRMRKLHLVLDLDHTLLHSR 108 (398)
Q Consensus 88 ll~~~Kl~LVLDLD~TLihs~ 108 (398)
.|.+-| .+++||||||+++.
T Consensus 13 ~~~~~~-~v~~DlDGTLl~~~ 32 (271)
T 1vjr_A 13 VLDKIE-LFILDMDGTFYLDD 32 (271)
T ss_dssp GGGGCC-EEEECCBTTTEETT
T ss_pred cccCCC-EEEEcCcCcEEeCC
Confidence 344444 78999999999873
No 178
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=90.55 E-value=0.24 Score=47.37 Aligned_cols=93 Identities=10% Similarity=-0.011 Sum_probs=64.0
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEc---------cCCCC------ccccccc
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITR---------EDFKQ------KERKCLD 216 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~sr---------d~~~~------~~~K~L~ 216 (398)
+.++||+.++|+.+. ..+.++|.|++...+++.+++.++... +|...+-.. ++... .+.+-++
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~-~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~~~ 255 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDY-AQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTLAQ 255 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSE-EEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCe-EEeeeeEeeCCeeeeeecccccChhhhHHHHHHHHH
Confidence 468999999999995 569999999999999999999998864 675543111 11111 1222334
Q ss_pred cccCCCCcEEEEeCCcccccCCCCceEEeC
Q 039039 217 LVLGQESSIVIVDDTESVWGGRVENLITVG 246 (398)
Q Consensus 217 ~l~~~~~~vvIiDD~~~vw~~~~~N~I~I~ 246 (398)
++..+++.++.|+|+..-...-...++.|.
T Consensus 256 ~lgi~~~~~v~vGDs~nDi~~a~~aG~~va 285 (335)
T 3n28_A 256 QYDVEIHNTVAVGDGANDLVMMAAAGLGVA 285 (335)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEE
T ss_pred HcCCChhhEEEEeCCHHHHHHHHHCCCeEE
Confidence 455678899999999854433333455543
No 179
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=90.35 E-value=0.23 Score=46.24 Aligned_cols=37 Identities=19% Similarity=0.156 Sum_probs=22.5
Q ss_pred ccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCC
Q 039039 157 PFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPD 193 (398)
Q Consensus 157 Pgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~ 193 (398)
|...+.|+++ .+...++|.|.-+..-+..+++.++.+
T Consensus 25 ~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~ 62 (282)
T 1rkq_A 25 PAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHME 62 (282)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 4455666666 445667777766666666666666543
No 180
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=90.26 E-value=0.24 Score=45.18 Aligned_cols=16 Identities=25% Similarity=0.370 Sum_probs=13.1
Q ss_pred ceEEEEeCCCceeeee
Q 039039 93 KLHLVLDLDHTLLHSR 108 (398)
Q Consensus 93 Kl~LVLDLD~TLihs~ 108 (398)
...++|||||||+++.
T Consensus 6 ~kli~~DlDGTLl~~~ 21 (266)
T 3pdw_A 6 YKGYLIDLDGTMYNGT 21 (266)
T ss_dssp CSEEEEECSSSTTCHH
T ss_pred CCEEEEeCcCceEeCC
Confidence 3478999999999863
No 181
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=90.03 E-value=0.22 Score=46.26 Aligned_cols=60 Identities=13% Similarity=0.127 Sum_probs=37.9
Q ss_pred ccCceEEEEeCCCceeeeeccCCCCchHHHHHHHHHhhcccccccCCCCCceeEEeeccceEEEEeCccHHHHHHHh-hc
Q 039039 90 RMRKLHLVLDLDHTLLHSRWIGKLTSDEKYLEKAAAAAGEFSSDKISRGNDLFKIKIGDNVLLVKLRPFVRSFLEEA-SR 168 (398)
Q Consensus 90 ~~~Kl~LVLDLD~TLihs~~~~~~~~~e~~~~~~~~~~~~F~~~~~p~~~~~f~~~~~~~~~~vklRPgl~eFL~~~-s~ 168 (398)
..+...+++||||||+++... .+ -|...+-|+++ .+
T Consensus 18 ~~~~kli~~DlDGTLl~~~~~-~i------------------------------------------~~~~~~al~~l~~~ 54 (283)
T 3dao_A 18 QGMIKLIATDIDGTLVKDGSL-LI------------------------------------------DPEYMSVIDRLIDK 54 (283)
T ss_dssp -CCCCEEEECCBTTTBSTTCS-CC------------------------------------------CHHHHHHHHHHHHT
T ss_pred ccCceEEEEeCcCCCCCCCCC-cC------------------------------------------CHHHHHHHHHHHHC
Confidence 345567899999999987530 01 14455556665 45
Q ss_pred cccEEEEcCCcHHHHHHHHHHhCC
Q 039039 169 LFEISVCTMGNREYATRAVKLLDP 192 (398)
Q Consensus 169 ~yEi~I~T~g~~~YA~~il~~LDP 192 (398)
...+++.|.-...-+..+++.+.+
T Consensus 55 G~~v~iaTGR~~~~~~~~~~~l~~ 78 (283)
T 3dao_A 55 GIIFVVCSGRQFSSEFKLFAPIKH 78 (283)
T ss_dssp TCEEEEECSSCHHHHHHHTGGGGG
T ss_pred CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 667777776666666666665544
No 182
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=89.99 E-value=0.25 Score=45.24 Aligned_cols=14 Identities=21% Similarity=0.553 Sum_probs=12.0
Q ss_pred EEEEeCCCceeeee
Q 039039 95 HLVLDLDHTLLHSR 108 (398)
Q Consensus 95 ~LVLDLD~TLihs~ 108 (398)
.+++||||||++..
T Consensus 3 ~i~~D~DGtL~~~~ 16 (263)
T 1zjj_A 3 AIIFDMDGVLYRGN 16 (263)
T ss_dssp EEEEECBTTTEETT
T ss_pred EEEEeCcCceEeCC
Confidence 68999999999753
No 183
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=89.48 E-value=0.058 Score=50.12 Aligned_cols=86 Identities=12% Similarity=0.199 Sum_probs=61.6
Q ss_pred EEeCccHHHHHHHhh-ccccEEEEcCCcHHHHHHHHHHhCCCCCccceeEEEccCCCCccccccccccCCCCcEEEEeCC
Q 039039 153 VKLRPFVRSFLEEAS-RLFEISVCTMGNREYATRAVKLLDPDCKYFNSRIITREDFKQKERKCLDLVLGQESSIVIVDDT 231 (398)
Q Consensus 153 vklRPgl~eFL~~~s-~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~~ri~srd~~~~~~~K~L~~l~~~~~~vvIiDD~ 231 (398)
..+|||+.++|+.+. ..+.++|.|++.+..+..+++.++... +|.. ++ .....+-++++....+.+++|.|+
T Consensus 135 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-~f~~-~~-----p~~k~~~~~~l~~~~~~~~~VGD~ 207 (263)
T 2yj3_A 135 DVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-YYSN-LS-----PEDKVRIIEKLKQNGNKVLMIGDG 207 (263)
Confidence 458999999999995 569999999999999999999998764 6733 43 112234455555567789999998
Q ss_pred cccccCCCCceEEe
Q 039039 232 ESVWGGRVENLITV 245 (398)
Q Consensus 232 ~~vw~~~~~N~I~I 245 (398)
..=...-...++.|
T Consensus 208 ~~D~~aa~~Agv~v 221 (263)
T 2yj3_A 208 VNDAAALALADVSV 221 (263)
Confidence 74333333344443
No 184
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=89.84 E-value=0.15 Score=46.48 Aligned_cols=16 Identities=38% Similarity=0.520 Sum_probs=13.8
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..+++||||||+++..
T Consensus 6 kli~fDlDGTLl~~~~ 21 (274)
T 3fzq_A 6 KLLILDIDGTLRDEVY 21 (274)
T ss_dssp CEEEECSBTTTBBTTT
T ss_pred eEEEEECCCCCCCCCC
Confidence 4689999999999864
No 185
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=89.74 E-value=0.57 Score=43.21 Aligned_cols=37 Identities=11% Similarity=0.005 Sum_probs=25.9
Q ss_pred ccHHHHHHHh-hccccEEEEcC---CcHHHHHHHHHHhCCC
Q 039039 157 PFVRSFLEEA-SRLFEISVCTM---GNREYATRAVKLLDPD 193 (398)
Q Consensus 157 Pgl~eFL~~~-s~~yEi~I~T~---g~~~YA~~il~~LDP~ 193 (398)
|+..++|+++ .+.+.+++.|+ -+.......++.++..
T Consensus 33 ~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~ 73 (284)
T 2hx1_A 33 PGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF 73 (284)
T ss_dssp TTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred hhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence 7888888888 67889999996 3344444555666544
No 186
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=89.50 E-value=0.4 Score=43.71 Aligned_cols=35 Identities=23% Similarity=0.209 Sum_probs=28.5
Q ss_pred HHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCC
Q 039039 159 VRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPD 193 (398)
Q Consensus 159 l~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~ 193 (398)
..+.|+++ .+...++|.|.-....+..+++.++..
T Consensus 22 ~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 22 AKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp GHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 66778877 577889999988888888888888765
No 187
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=88.56 E-value=0.53 Score=44.40 Aligned_cols=35 Identities=20% Similarity=0.194 Sum_probs=22.8
Q ss_pred ccHHHHHHHh-hccccEEEEcCCcHHHHHHHH--HHhC
Q 039039 157 PFVRSFLEEA-SRLFEISVCTMGNREYATRAV--KLLD 191 (398)
Q Consensus 157 Pgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il--~~LD 191 (398)
|...+.|+++ .+...++|.|.-+..-+..++ +.++
T Consensus 48 ~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~ 85 (301)
T 2b30_A 48 SENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLK 85 (301)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhc
Confidence 4556666666 456777777777766666666 6544
No 188
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=88.39 E-value=0.5 Score=43.44 Aligned_cols=17 Identities=29% Similarity=0.491 Sum_probs=13.6
Q ss_pred CceEEEEeCCCceeeee
Q 039039 92 RKLHLVLDLDHTLLHSR 108 (398)
Q Consensus 92 ~Kl~LVLDLD~TLihs~ 108 (398)
+...+++||||||+++.
T Consensus 12 ~~kli~~DlDGTLl~~~ 28 (262)
T 2fue_A 12 ERVLCLFDVDGTLTPAR 28 (262)
T ss_dssp -CEEEEEESBTTTBSTT
T ss_pred CeEEEEEeCccCCCCCC
Confidence 44578999999999864
No 189
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=88.07 E-value=0.42 Score=43.46 Aligned_cols=33 Identities=15% Similarity=0.167 Sum_probs=20.7
Q ss_pred HHHHHHHhhccccEEEEcCCcHHHHHHHHHHhC
Q 039039 159 VRSFLEEASRLFEISVCTMGNREYATRAVKLLD 191 (398)
Q Consensus 159 l~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LD 191 (398)
..+.|+++.+...++|.|.-+...+..+++.++
T Consensus 24 ~~~~l~~~~~gi~v~iaTGR~~~~~~~~~~~l~ 56 (244)
T 1s2o_A 24 LQEYLGDRRGNFYLAYATGRSYHSARELQKQVG 56 (244)
T ss_dssp HHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 345555555566677777666666666766654
No 190
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=87.73 E-value=0.81 Score=42.86 Aligned_cols=21 Identities=14% Similarity=-0.020 Sum_probs=16.7
Q ss_pred ccHHHHHHHh-hccccEEEEcC
Q 039039 157 PFVRSFLEEA-SRLFEISVCTM 177 (398)
Q Consensus 157 Pgl~eFL~~~-s~~yEi~I~T~ 177 (398)
|+..++|+.+ .+.+.+++.|+
T Consensus 40 ~~~~~~l~~l~~~g~~~~~~Tn 61 (306)
T 2oyc_A 40 PGAPELLERLARAGKAALFVSN 61 (306)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEC
T ss_pred cCHHHHHHHHHHCCCeEEEEEC
Confidence 7788888887 56788888885
No 191
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=87.18 E-value=0.74 Score=41.63 Aligned_cols=17 Identities=29% Similarity=0.333 Sum_probs=14.2
Q ss_pred CceEEEEeCCCceeeee
Q 039039 92 RKLHLVLDLDHTLLHSR 108 (398)
Q Consensus 92 ~Kl~LVLDLD~TLihs~ 108 (398)
++..+++||||||+++.
T Consensus 5 ~~kli~~DlDGTLl~~~ 21 (246)
T 2amy_A 5 GPALCLFDVDGTLTAPR 21 (246)
T ss_dssp CSEEEEEESBTTTBCTT
T ss_pred CceEEEEECCCCcCCCC
Confidence 45678999999999864
No 192
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=86.90 E-value=1.6 Score=38.90 Aligned_cols=15 Identities=27% Similarity=0.361 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeeee
Q 039039 94 LHLVLDLDHTLLHSR 108 (398)
Q Consensus 94 l~LVLDLD~TLihs~ 108 (398)
..+++||||||+++.
T Consensus 13 k~i~fDlDGTLl~s~ 27 (271)
T 2x4d_A 13 RGVLLDISGVLYDSG 27 (271)
T ss_dssp CEEEECCBTTTEECC
T ss_pred CEEEEeCCCeEEecC
Confidence 468999999999985
No 193
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=86.84 E-value=0.29 Score=45.98 Aligned_cols=17 Identities=29% Similarity=0.339 Sum_probs=14.2
Q ss_pred ceEEEEeCCCceeeeec
Q 039039 93 KLHLVLDLDHTLLHSRW 109 (398)
Q Consensus 93 Kl~LVLDLD~TLihs~~ 109 (398)
...+++||||||+++..
T Consensus 37 iKli~fDlDGTLld~~~ 53 (304)
T 3l7y_A 37 VKVIATDMDGTFLNSKG 53 (304)
T ss_dssp CSEEEECCCCCCSCTTS
T ss_pred eEEEEEeCCCCCCCCCC
Confidence 35789999999998863
No 194
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=86.81 E-value=0.72 Score=42.24 Aligned_cols=16 Identities=38% Similarity=0.613 Sum_probs=13.6
Q ss_pred ceEEEEeCCCceeeee
Q 039039 93 KLHLVLDLDHTLLHSR 108 (398)
Q Consensus 93 Kl~LVLDLD~TLihs~ 108 (398)
...+++||||||+++.
T Consensus 4 ~kli~~DlDGTLl~~~ 19 (246)
T 3f9r_A 4 RVLLLFDVDGTLTPPR 19 (246)
T ss_dssp SEEEEECSBTTTBSTT
T ss_pred ceEEEEeCcCCcCCCC
Confidence 4578999999999875
No 195
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=86.80 E-value=0.49 Score=42.98 Aligned_cols=16 Identities=25% Similarity=0.376 Sum_probs=13.6
Q ss_pred ceEEEEeCCCceeeee
Q 039039 93 KLHLVLDLDHTLLHSR 108 (398)
Q Consensus 93 Kl~LVLDLD~TLihs~ 108 (398)
...++|||||||+++.
T Consensus 5 ~k~v~fDlDGTL~~~~ 20 (264)
T 1yv9_A 5 YQGYLIDLDGTIYLGK 20 (264)
T ss_dssp CCEEEECCBTTTEETT
T ss_pred CCEEEEeCCCeEEeCC
Confidence 3478999999999975
No 196
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=86.01 E-value=0.65 Score=41.61 Aligned_cols=16 Identities=25% Similarity=0.225 Sum_probs=11.8
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..+++||||||+++..
T Consensus 8 k~i~fDlDGTLld~~~ 23 (259)
T 2ho4_A 8 KAVLVDLNGTLHIEDA 23 (259)
T ss_dssp CEEEEESSSSSCC---
T ss_pred CEEEEeCcCcEEeCCE
Confidence 4789999999999763
No 197
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=85.76 E-value=0.42 Score=44.03 Aligned_cols=15 Identities=33% Similarity=0.472 Sum_probs=12.9
Q ss_pred eEEEEeCCCceeeee
Q 039039 94 LHLVLDLDHTLLHSR 108 (398)
Q Consensus 94 l~LVLDLD~TLihs~ 108 (398)
..+++||||||+++.
T Consensus 4 kli~~DlDGTLl~~~ 18 (271)
T 1rlm_A 4 KVIVTDMDGTFLNDA 18 (271)
T ss_dssp CEEEECCCCCCSCTT
T ss_pred cEEEEeCCCCCCCCC
Confidence 368999999999875
No 198
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=84.75 E-value=0.21 Score=45.66 Aligned_cols=15 Identities=33% Similarity=0.408 Sum_probs=13.0
Q ss_pred EEEEeCCCceeeeec
Q 039039 95 HLVLDLDHTLLHSRW 109 (398)
Q Consensus 95 ~LVLDLD~TLihs~~ 109 (398)
.+++||||||+++..
T Consensus 4 li~~DlDGTLl~~~~ 18 (261)
T 2rbk_A 4 ALFFDIDGTLVSFET 18 (261)
T ss_dssp EEEECSBTTTBCTTT
T ss_pred EEEEeCCCCCcCCCC
Confidence 689999999999863
No 199
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=84.61 E-value=0.52 Score=42.91 Aligned_cols=15 Identities=47% Similarity=0.465 Sum_probs=12.7
Q ss_pred ceEEEEeCCCceeee
Q 039039 93 KLHLVLDLDHTLLHS 107 (398)
Q Consensus 93 Kl~LVLDLD~TLihs 107 (398)
-..+++||||||+++
T Consensus 12 iKli~~DlDGTLl~~ 26 (268)
T 3r4c_A 12 IKVLLLDVDGTLLSF 26 (268)
T ss_dssp CCEEEECSBTTTBCT
T ss_pred eEEEEEeCCCCCcCC
Confidence 357899999999984
No 200
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=82.80 E-value=0.37 Score=41.35 Aligned_cols=16 Identities=19% Similarity=0.331 Sum_probs=14.1
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||++|..
T Consensus 5 ~~viFD~DGtL~Ds~~ 20 (180)
T 3bwv_A 5 QRIAIDMDEVLADTLG 20 (180)
T ss_dssp CEEEEETBTTTBCHHH
T ss_pred cEEEEeCCCcccccHH
Confidence 4789999999999974
No 201
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=82.10 E-value=0.85 Score=41.31 Aligned_cols=33 Identities=18% Similarity=0.172 Sum_probs=22.3
Q ss_pred ccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHh
Q 039039 157 PFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLL 190 (398)
Q Consensus 157 Pgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~L 190 (398)
|...+.|+++ .+. .++|.|.-+..-+..+++.+
T Consensus 26 ~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l 59 (239)
T 1u02_A 26 AGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD 59 (239)
T ss_dssp HHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS
T ss_pred HHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc
Confidence 6778888888 456 77777776666666655444
No 202
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=79.96 E-value=0.57 Score=41.65 Aligned_cols=18 Identities=28% Similarity=0.510 Sum_probs=14.9
Q ss_pred CceEEEEeCCCceeeeec
Q 039039 92 RKLHLVLDLDHTLLHSRW 109 (398)
Q Consensus 92 ~Kl~LVLDLD~TLihs~~ 109 (398)
....++|||||||+++..
T Consensus 10 ~~k~viFDlDGTL~ds~~ 27 (231)
T 2p11_A 10 HDIVFLFDCDNTLLDNDH 27 (231)
T ss_dssp CSEEEEECCBTTTBCHHH
T ss_pred CCeEEEEcCCCCCEecHH
Confidence 344789999999999874
No 203
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=79.02 E-value=0.78 Score=40.06 Aligned_cols=16 Identities=31% Similarity=0.426 Sum_probs=13.9
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 5 k~iifDlDGTL~d~~~ 20 (234)
T 2hcf_A 5 TLVLFDIDGTLLKVES 20 (234)
T ss_dssp EEEEECCBTTTEEECT
T ss_pred eEEEEcCCCCcccCcc
Confidence 4789999999999864
No 204
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=78.87 E-value=0.71 Score=40.35 Aligned_cols=16 Identities=38% Similarity=0.495 Sum_probs=13.8
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 5 k~viFDlDGTL~d~~~ 20 (210)
T 2ah5_A 5 TAIFFDLDGTLVDSSI 20 (210)
T ss_dssp CEEEECSBTTTEECHH
T ss_pred CEEEEcCCCcCccCHH
Confidence 4789999999999864
No 205
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=78.20 E-value=0.75 Score=39.64 Aligned_cols=16 Identities=31% Similarity=0.331 Sum_probs=13.7
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 7 k~v~fDlDGTL~d~~~ 22 (225)
T 3d6j_A 7 TVYLFDFDYTLADSSR 22 (225)
T ss_dssp SEEEECCBTTTEECHH
T ss_pred CEEEEeCCCCCCCCHH
Confidence 4789999999999863
No 206
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=77.66 E-value=0.67 Score=39.22 Aligned_cols=43 Identities=7% Similarity=-0.178 Sum_probs=27.1
Q ss_pred hhHHHHHHhCCEEeeecCCCccEEEECCCCCHHHHHHHhCCCeeeChhHHHHH
Q 039039 332 LTWSRAEEMGAICTLVTDASITHVVSSNTQSETFEWAEQENKCLVHPQWINDA 384 (398)
Q Consensus 332 ~l~~la~~lGa~~~~~~~~~vTHlVa~~~~t~K~~~A~~~gi~IV~~~WL~~c 384 (398)
.+..+++.+|.. .+++-..+..=+..|+..|+.++...|-...
T Consensus 142 ~~~~~~~~~~~~----------~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~ 184 (190)
T 2fi1_A 142 SMLYLREKYQIS----------SGLVIGDRPIDIEAGQAAGLDTHLFTSIVNL 184 (190)
T ss_dssp HHHHHHHHTTCS----------SEEEEESSHHHHHHHHHTTCEEEECSCHHHH
T ss_pred HHHHHHHHcCCC----------eEEEEcCCHHHHHHHHHcCCeEEEECCCCCh
Confidence 667788888853 2333333334566777789888877775544
No 207
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=77.43 E-value=0.75 Score=39.59 Aligned_cols=15 Identities=27% Similarity=0.268 Sum_probs=13.3
Q ss_pred EEEEeCCCceeeeec
Q 039039 95 HLVLDLDHTLLHSRW 109 (398)
Q Consensus 95 ~LVLDLD~TLihs~~ 109 (398)
.++|||||||+++..
T Consensus 3 ~iiFDlDGTL~d~~~ 17 (201)
T 2w43_A 3 ILAFDIFGTVLDTST 17 (201)
T ss_dssp EEEECCBTTTEEGGG
T ss_pred EEEEeCCCceecchh
Confidence 578999999999875
No 208
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=76.38 E-value=0.87 Score=39.30 Aligned_cols=16 Identities=38% Similarity=0.441 Sum_probs=13.7
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 5 k~iifDlDGTL~d~~~ 20 (209)
T 2hdo_A 5 QALMFDIDGTLTNSQP 20 (209)
T ss_dssp SEEEECSBTTTEECHH
T ss_pred cEEEEcCCCCCcCCHH
Confidence 4789999999999863
No 209
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=76.37 E-value=0.79 Score=41.73 Aligned_cols=15 Identities=47% Similarity=0.645 Sum_probs=13.1
Q ss_pred eEEEEeCCCceeeee
Q 039039 94 LHLVLDLDHTLLHSR 108 (398)
Q Consensus 94 l~LVLDLD~TLihs~ 108 (398)
+.+++||||||+++.
T Consensus 1 ~li~~DlDGTLl~~~ 15 (259)
T 3zx4_A 1 MIVFTDLDGTLLDER 15 (259)
T ss_dssp CEEEECCCCCCSCSS
T ss_pred CEEEEeCCCCCcCCC
Confidence 368999999999886
No 210
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=76.36 E-value=0.87 Score=38.49 Aligned_cols=16 Identities=44% Similarity=0.445 Sum_probs=13.6
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..+++||||||+++..
T Consensus 5 k~i~fDlDGTL~~~~~ 20 (207)
T 2go7_A 5 TAFIWDLDGTLLDSYE 20 (207)
T ss_dssp CEEEECTBTTTEECHH
T ss_pred cEEEEeCCCcccccHH
Confidence 4789999999998863
No 211
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=76.34 E-value=0.86 Score=40.64 Aligned_cols=16 Identities=25% Similarity=0.401 Sum_probs=13.8
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 5 k~viFDlDGTL~ds~~ 20 (240)
T 2hi0_A 5 KAAIFDMDGTILDTSA 20 (240)
T ss_dssp SEEEECSBTTTEECHH
T ss_pred cEEEEecCCCCccCHH
Confidence 3689999999999864
No 212
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=75.80 E-value=0.96 Score=38.52 Aligned_cols=17 Identities=18% Similarity=0.358 Sum_probs=14.2
Q ss_pred ceEEEEeCCCceeeeec
Q 039039 93 KLHLVLDLDHTLLHSRW 109 (398)
Q Consensus 93 Kl~LVLDLD~TLihs~~ 109 (398)
...++|||||||+++..
T Consensus 5 ~k~i~fDlDGTL~~~~~ 21 (214)
T 3e58_A 5 VEAIIFDMDGVLFDTEK 21 (214)
T ss_dssp CCEEEEESBTTTBCCHH
T ss_pred ccEEEEcCCCCccccHH
Confidence 35789999999999864
No 213
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=75.48 E-value=0.9 Score=40.62 Aligned_cols=16 Identities=31% Similarity=0.131 Sum_probs=13.9
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 14 k~iifDlDGTL~d~~~ 29 (251)
T 2pke_A 14 QLVGFDGDDTLWKSED 29 (251)
T ss_dssp CEEEECCBTTTBCCHH
T ss_pred eEEEEeCCCCCccCcH
Confidence 4789999999999864
No 214
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=75.22 E-value=0.95 Score=38.74 Aligned_cols=15 Identities=27% Similarity=0.319 Sum_probs=13.3
Q ss_pred eEEEEeCCCceeeee
Q 039039 94 LHLVLDLDHTLLHSR 108 (398)
Q Consensus 94 l~LVLDLD~TLihs~ 108 (398)
..++||+||||+++.
T Consensus 5 k~viFDlDGTL~d~~ 19 (200)
T 3cnh_A 5 KALFWDIGGVLLTNG 19 (200)
T ss_dssp CEEEECCBTTTBCCS
T ss_pred eEEEEeCCCeeECCC
Confidence 478999999999976
No 215
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=75.02 E-value=1.1 Score=40.27 Aligned_cols=20 Identities=35% Similarity=0.296 Sum_probs=15.3
Q ss_pred hccCceEEEEeCCCceeeeec
Q 039039 89 LRMRKLHLVLDLDHTLLHSRW 109 (398)
Q Consensus 89 l~~~Kl~LVLDLD~TLihs~~ 109 (398)
+..-| .++|||||||+++..
T Consensus 20 ~~~~k-~iiFDlDGTL~d~~~ 39 (243)
T 2hsz_A 20 MTQFK-LIGFDLDGTLVNSLP 39 (243)
T ss_dssp CSSCS-EEEECSBTTTEECHH
T ss_pred CccCC-EEEEcCCCcCCCCHH
Confidence 33344 789999999999863
No 216
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=74.99 E-value=1.1 Score=39.43 Aligned_cols=19 Identities=32% Similarity=0.338 Sum_probs=15.3
Q ss_pred cCceEEEEeCCCceeeeec
Q 039039 91 MRKLHLVLDLDHTLLHSRW 109 (398)
Q Consensus 91 ~~Kl~LVLDLD~TLihs~~ 109 (398)
.+-..++|||||||+++..
T Consensus 17 ~~ik~i~fDlDGTL~d~~~ 35 (237)
T 4ex6_A 17 AADRGVILDLDGTLADTPA 35 (237)
T ss_dssp CCCEEEEECSBTTTBCCHH
T ss_pred ccCCEEEEcCCCCCcCCHH
Confidence 4455889999999998863
No 217
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=74.94 E-value=2.2 Score=39.78 Aligned_cols=42 Identities=10% Similarity=0.080 Sum_probs=38.0
Q ss_pred EEEeCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCCC
Q 039039 152 LVKLRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDPD 193 (398)
Q Consensus 152 ~vklRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP~ 193 (398)
-+.+|||+.+|++.+ ...+.++|.|.|....|+++++.+...
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~ 181 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVY 181 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCC
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 368999999999999 578999999999999999999998644
No 218
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=74.87 E-value=1 Score=39.56 Aligned_cols=16 Identities=25% Similarity=0.507 Sum_probs=13.8
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..+++||||||+++..
T Consensus 4 k~i~fDlDGTLl~~~~ 19 (250)
T 2c4n_A 4 KNVICDIDGVLMHDNV 19 (250)
T ss_dssp CEEEEECBTTTEETTE
T ss_pred cEEEEcCcceEEeCCE
Confidence 3689999999999864
No 219
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=74.63 E-value=0.79 Score=39.54 Aligned_cols=15 Identities=20% Similarity=0.342 Sum_probs=13.1
Q ss_pred EEEEeCCCceeeeec
Q 039039 95 HLVLDLDHTLLHSRW 109 (398)
Q Consensus 95 ~LVLDLD~TLihs~~ 109 (398)
.++|||||||+++..
T Consensus 4 ~i~fDlDGTL~d~~~ 18 (221)
T 2wf7_A 4 AVLFDLDGVITDTAE 18 (221)
T ss_dssp EEEECCBTTTBTHHH
T ss_pred EEEECCCCcccCChH
Confidence 689999999999863
No 220
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=74.31 E-value=1 Score=39.16 Aligned_cols=16 Identities=25% Similarity=0.324 Sum_probs=13.7
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 5 k~i~fDlDGTL~d~~~ 20 (229)
T 2fdr_A 5 DLIIFDCDGVLVDSEI 20 (229)
T ss_dssp SEEEECSBTTTBCCHH
T ss_pred cEEEEcCCCCcCccHH
Confidence 4789999999999864
No 221
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=74.24 E-value=0.97 Score=39.29 Aligned_cols=16 Identities=38% Similarity=0.320 Sum_probs=13.7
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 5 k~i~fDlDGTL~d~~~ 20 (226)
T 3mc1_A 5 NYVLFDLDGTLTDSAE 20 (226)
T ss_dssp CEEEECSBTTTBCCHH
T ss_pred CEEEEeCCCccccCHH
Confidence 4789999999998863
No 222
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=74.21 E-value=0.96 Score=38.96 Aligned_cols=16 Identities=31% Similarity=0.447 Sum_probs=13.7
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..+++||||||+++..
T Consensus 10 k~i~fDlDGTL~~~~~ 25 (226)
T 1te2_A 10 LAAIFDMDGLLIDSEP 25 (226)
T ss_dssp CEEEECCBTTTBCCHH
T ss_pred CEEEECCCCCcCcCHH
Confidence 4789999999998863
No 223
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=73.78 E-value=1.1 Score=38.28 Aligned_cols=15 Identities=20% Similarity=0.468 Sum_probs=13.1
Q ss_pred EEEEeCCCceeeeec
Q 039039 95 HLVLDLDHTLLHSRW 109 (398)
Q Consensus 95 ~LVLDLD~TLihs~~ 109 (398)
.++|||||||+++..
T Consensus 3 ~i~fDlDGTL~~~~~ 17 (216)
T 2pib_A 3 AVIFDMDGVLMDTEP 17 (216)
T ss_dssp EEEEESBTTTBCCGG
T ss_pred EEEECCCCCCCCchH
Confidence 689999999999864
No 224
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=73.50 E-value=0.95 Score=39.64 Aligned_cols=16 Identities=19% Similarity=0.304 Sum_probs=13.5
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 3 k~i~fDlDGTL~d~~~ 18 (233)
T 3nas_A 3 KAVIFDLDGVITDTAE 18 (233)
T ss_dssp CEEEECSBTTTBCHHH
T ss_pred cEEEECCCCCcCCCHH
Confidence 3689999999999863
No 225
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=73.28 E-value=1.2 Score=38.60 Aligned_cols=16 Identities=25% Similarity=0.237 Sum_probs=13.8
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 9 k~i~fDlDGTL~~~~~ 24 (234)
T 3ddh_A 9 KVIAFDADDTLWSNEP 24 (234)
T ss_dssp CEEEECCBTTTBCCHH
T ss_pred cEEEEeCCCCCccCcc
Confidence 4789999999999864
No 226
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=72.94 E-value=1.1 Score=40.92 Aligned_cols=18 Identities=33% Similarity=0.466 Sum_probs=15.0
Q ss_pred CceEEEEeCCCceeeeec
Q 039039 92 RKLHLVLDLDHTLLHSRW 109 (398)
Q Consensus 92 ~Kl~LVLDLD~TLihs~~ 109 (398)
+...++|||||||+++..
T Consensus 17 ~~k~viFDlDGTLvds~~ 34 (260)
T 2gfh_A 17 RVRAVFFDLDNTLIDTAG 34 (260)
T ss_dssp CCCEEEECCBTTTBCHHH
T ss_pred cceEEEEcCCCCCCCCHH
Confidence 445789999999999874
No 227
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=72.89 E-value=0.99 Score=39.24 Aligned_cols=16 Identities=25% Similarity=0.202 Sum_probs=13.5
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 5 k~i~fDlDGTL~d~~~ 20 (235)
T 2om6_A 5 KLVTFDVWNTLLDLNI 20 (235)
T ss_dssp CEEEECCBTTTBCHHH
T ss_pred eEEEEeCCCCCCCcch
Confidence 3689999999999763
No 228
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=72.75 E-value=1.1 Score=39.58 Aligned_cols=17 Identities=24% Similarity=0.190 Sum_probs=14.2
Q ss_pred ceEEEEeCCCceeeeec
Q 039039 93 KLHLVLDLDHTLLHSRW 109 (398)
Q Consensus 93 Kl~LVLDLD~TLihs~~ 109 (398)
...++|||||||+++..
T Consensus 22 ik~i~fDlDGTL~d~~~ 38 (254)
T 3umc_A 22 MRAILFDVFGTLVDWRS 38 (254)
T ss_dssp CCEEEECCBTTTEEHHH
T ss_pred CcEEEEeCCCccEecCc
Confidence 45789999999998753
No 229
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=72.58 E-value=1 Score=39.95 Aligned_cols=15 Identities=33% Similarity=0.516 Sum_probs=13.3
Q ss_pred EEEEeCCCceeeeec
Q 039039 95 HLVLDLDHTLLHSRW 109 (398)
Q Consensus 95 ~LVLDLD~TLihs~~ 109 (398)
.++|||||||+++..
T Consensus 4 ~iiFDlDGTL~d~~~ 18 (241)
T 2hoq_A 4 VIFFDLDDTLVDTSK 18 (241)
T ss_dssp EEEECSBTTTBCHHH
T ss_pred EEEEcCCCCCCCChh
Confidence 689999999999864
No 230
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=71.91 E-value=3.3 Score=40.79 Aligned_cols=40 Identities=0% Similarity=-0.081 Sum_probs=37.0
Q ss_pred EEeCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHhCC
Q 039039 153 VKLRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLLDP 192 (398)
Q Consensus 153 vklRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~LDP 192 (398)
++++|++.+.++.+ +..++++|.|+|.+..++++++.+..
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 45899999999999 89999999999999999999998754
No 231
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=71.56 E-value=1.3 Score=38.93 Aligned_cols=15 Identities=40% Similarity=0.543 Sum_probs=13.3
Q ss_pred EEEEeCCCceeeeec
Q 039039 95 HLVLDLDHTLLHSRW 109 (398)
Q Consensus 95 ~LVLDLD~TLihs~~ 109 (398)
.++|||||||+++..
T Consensus 5 ~viFDlDGTL~d~~~ 19 (222)
T 2nyv_A 5 VILFDLDGTLIDSAK 19 (222)
T ss_dssp EEEECTBTTTEECHH
T ss_pred EEEECCCCcCCCCHH
Confidence 689999999999864
No 232
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=71.48 E-value=1.3 Score=39.46 Aligned_cols=18 Identities=33% Similarity=0.545 Sum_probs=14.6
Q ss_pred CceEEEEeCCCceeeeec
Q 039039 92 RKLHLVLDLDHTLLHSRW 109 (398)
Q Consensus 92 ~Kl~LVLDLD~TLihs~~ 109 (398)
+...++|||||||+++..
T Consensus 29 ~ik~i~fDlDGTL~d~~~ 46 (250)
T 3l5k_A 29 PVTHLIFDMDGLLLDTER 46 (250)
T ss_dssp CCSEEEEETBTTTBCHHH
T ss_pred CCcEEEEcCCCCcCCCHH
Confidence 345789999999998853
No 233
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=71.32 E-value=1.2 Score=39.96 Aligned_cols=16 Identities=6% Similarity=0.005 Sum_probs=13.5
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 7 k~i~fDlDGTLld~~~ 22 (267)
T 1swv_A 7 EAVIFAWAGTTVDYGC 22 (267)
T ss_dssp CEEEECSBTTTBSTTC
T ss_pred eEEEEecCCCEEeCCC
Confidence 4789999999999753
No 234
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=71.10 E-value=1.3 Score=39.93 Aligned_cols=16 Identities=19% Similarity=0.374 Sum_probs=13.4
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||++|..
T Consensus 6 KaViFDlDGTL~Ds~~ 21 (243)
T 4g9b_A 6 QGVIFDLDGVITDTAH 21 (243)
T ss_dssp CEEEECSBTTTBCCHH
T ss_pred cEEEEcCCCcccCCHH
Confidence 3689999999999753
No 235
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=70.97 E-value=1.2 Score=38.83 Aligned_cols=16 Identities=25% Similarity=0.115 Sum_probs=13.6
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 7 k~i~fD~DGTL~d~~~ 22 (240)
T 3smv_A 7 KALTFDCYGTLIDWET 22 (240)
T ss_dssp SEEEECCBTTTBCHHH
T ss_pred eEEEEeCCCcCcCCch
Confidence 4789999999998863
No 236
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=70.93 E-value=1.4 Score=40.35 Aligned_cols=16 Identities=25% Similarity=0.277 Sum_probs=13.9
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 36 k~iifDlDGTLlds~~ 51 (275)
T 2qlt_A 36 NAALFDVDGTIIISQP 51 (275)
T ss_dssp SEEEECCBTTTEECHH
T ss_pred CEEEECCCCCCCCCHH
Confidence 4789999999999864
No 237
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=70.54 E-value=1.5 Score=38.59 Aligned_cols=16 Identities=31% Similarity=0.356 Sum_probs=13.9
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 30 k~iifDlDGTL~d~~~ 45 (240)
T 3sd7_A 30 EIVLFDLDGTLTDPKE 45 (240)
T ss_dssp SEEEECSBTTTEECHH
T ss_pred cEEEEecCCcCccCHH
Confidence 5889999999999863
No 238
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=70.37 E-value=1.6 Score=38.98 Aligned_cols=18 Identities=28% Similarity=0.250 Sum_probs=14.7
Q ss_pred CceEEEEeCCCceeeeec
Q 039039 92 RKLHLVLDLDHTLLHSRW 109 (398)
Q Consensus 92 ~Kl~LVLDLD~TLihs~~ 109 (398)
+...++|||||||+++..
T Consensus 27 ~ik~i~fDlDGTL~d~~~ 44 (259)
T 4eek_A 27 PFDAVLFDLDGVLVESEG 44 (259)
T ss_dssp CCSEEEEESBTTTEECHH
T ss_pred CCCEEEECCCCCcccCHH
Confidence 345889999999998863
No 239
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=70.21 E-value=1.3 Score=38.49 Aligned_cols=16 Identities=31% Similarity=0.329 Sum_probs=13.7
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 3 k~i~fDlDGTL~~~~~ 18 (230)
T 3vay_A 3 KLVTFDLDDTLWDTAP 18 (230)
T ss_dssp CEEEECCBTTTBCSHH
T ss_pred eEEEecCcccCcCCch
Confidence 3689999999999863
No 240
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=69.82 E-value=1.3 Score=38.58 Aligned_cols=15 Identities=20% Similarity=0.020 Sum_probs=13.2
Q ss_pred eEEEEeCCCceeeee
Q 039039 94 LHLVLDLDHTLLHSR 108 (398)
Q Consensus 94 l~LVLDLD~TLihs~ 108 (398)
..++|||||||+++.
T Consensus 3 k~i~fDlDGTL~d~~ 17 (234)
T 3u26_A 3 RAVFFDSLGTLNSVE 17 (234)
T ss_dssp CEEEECSTTTTBCHH
T ss_pred cEEEEcCCCcccccc
Confidence 368999999999986
No 241
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=69.33 E-value=1.4 Score=38.85 Aligned_cols=17 Identities=18% Similarity=0.057 Sum_probs=14.2
Q ss_pred ceEEEEeCCCceeeeec
Q 039039 93 KLHLVLDLDHTLLHSRW 109 (398)
Q Consensus 93 Kl~LVLDLD~TLihs~~ 109 (398)
...++|||||||+++..
T Consensus 15 ~k~i~fDlDGTL~d~~~ 31 (254)
T 3umg_A 15 VRAVLFDTFGTVVDWRT 31 (254)
T ss_dssp CCEEEECCBTTTBCHHH
T ss_pred ceEEEEeCCCceecCch
Confidence 45789999999998863
No 242
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=68.98 E-value=1.4 Score=38.29 Aligned_cols=17 Identities=29% Similarity=0.317 Sum_probs=14.1
Q ss_pred ceEEEEeCCCceeeeec
Q 039039 93 KLHLVLDLDHTLLHSRW 109 (398)
Q Consensus 93 Kl~LVLDLD~TLihs~~ 109 (398)
...++||+||||+++..
T Consensus 5 ~k~i~fDlDGTL~d~~~ 21 (240)
T 3qnm_A 5 YKNLFFDLDDTIWAFSR 21 (240)
T ss_dssp CSEEEECCBTTTBCHHH
T ss_pred ceEEEEcCCCCCcCchh
Confidence 44789999999998863
No 243
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=68.36 E-value=1.8 Score=38.61 Aligned_cols=16 Identities=25% Similarity=0.386 Sum_probs=13.3
Q ss_pred ceEEEEeCCCceeeee
Q 039039 93 KLHLVLDLDHTLLHSR 108 (398)
Q Consensus 93 Kl~LVLDLD~TLihs~ 108 (398)
+..++||+||||+++.
T Consensus 6 ~k~viFD~DGTL~d~d 21 (236)
T 2fea_A 6 KPFIICDFDGTITMND 21 (236)
T ss_dssp CEEEEECCTTTTBSSC
T ss_pred CcEEEEeCCCCCCccc
Confidence 4588999999999663
No 244
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=68.28 E-value=1.5 Score=39.33 Aligned_cols=15 Identities=27% Similarity=0.264 Sum_probs=13.2
Q ss_pred EEEEeCCCceeeeec
Q 039039 95 HLVLDLDHTLLHSRW 109 (398)
Q Consensus 95 ~LVLDLD~TLihs~~ 109 (398)
.++|||||||+++..
T Consensus 4 ~viFDlDGTL~d~~~ 18 (253)
T 1qq5_A 4 AVVFDAYGTLFDVQS 18 (253)
T ss_dssp EEEECTBTTTBCTTT
T ss_pred EEEEeCCCCCCccHh
Confidence 689999999998863
No 245
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=66.48 E-value=1.9 Score=40.98 Aligned_cols=22 Identities=9% Similarity=0.146 Sum_probs=0.0
Q ss_pred hhhhccCceEEEEeCCCceeee
Q 039039 86 KNLLRMRKLHLVLDLDHTLLHS 107 (398)
Q Consensus 86 ~~ll~~~Kl~LVLDLD~TLihs 107 (398)
+.........+++||||||+++
T Consensus 14 ~~~~~~~~kli~fDlDGTLld~ 35 (332)
T 1y8a_A 14 RENLYFQGHMFFTDWEGPWILT 35 (332)
T ss_dssp ------CCCEEEECSBTTTBCC
T ss_pred hhhhCCCceEEEEECcCCCcCc
No 246
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=65.58 E-value=1.8 Score=39.81 Aligned_cols=16 Identities=19% Similarity=0.324 Sum_probs=13.9
Q ss_pred eEEEEeCCCceeeeec
Q 039039 94 LHLVLDLDHTLLHSRW 109 (398)
Q Consensus 94 l~LVLDLD~TLihs~~ 109 (398)
..++|||||||+++..
T Consensus 32 kaviFDlDGTLvDs~~ 47 (253)
T 2g80_A 32 STYLLDIEGTVCPISF 47 (253)
T ss_dssp SEEEECCBTTTBCTHH
T ss_pred cEEEEcCCCCcccccc
Confidence 4799999999999863
No 247
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=64.77 E-value=2.3 Score=38.48 Aligned_cols=15 Identities=40% Similarity=0.483 Sum_probs=13.2
Q ss_pred EEEEeCCCceeeeec
Q 039039 95 HLVLDLDHTLLHSRW 109 (398)
Q Consensus 95 ~LVLDLD~TLihs~~ 109 (398)
.++|||||||+++..
T Consensus 3 ~iiFDlDGTL~d~~~ 17 (263)
T 3k1z_A 3 LLTWDVKDTLLRLRH 17 (263)
T ss_dssp EEEECCBTTTEEESS
T ss_pred EEEEcCCCceeCCCC
Confidence 689999999999864
No 248
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=63.47 E-value=2.4 Score=36.48 Aligned_cols=12 Identities=33% Similarity=0.426 Sum_probs=11.3
Q ss_pred EEEEeCCCceee
Q 039039 95 HLVLDLDHTLLH 106 (398)
Q Consensus 95 ~LVLDLD~TLih 106 (398)
.++|||||||++
T Consensus 4 ~viFD~DGTL~d 15 (206)
T 1rku_A 4 IACLDLEGVLVP 15 (206)
T ss_dssp EEEEESBTTTBC
T ss_pred EEEEccCCcchh
Confidence 689999999999
No 249
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=61.97 E-value=2.2 Score=39.02 Aligned_cols=16 Identities=19% Similarity=0.185 Sum_probs=13.9
Q ss_pred ceEEEEeCCCceeeee
Q 039039 93 KLHLVLDLDHTLLHSR 108 (398)
Q Consensus 93 Kl~LVLDLD~TLihs~ 108 (398)
-..++|||||||+++.
T Consensus 10 ikaviFDlDGTL~ds~ 25 (261)
T 1yns_A 10 VTVILLDIEGTTTPIA 25 (261)
T ss_dssp CCEEEECCBTTTBCHH
T ss_pred CCEEEEecCCCccchh
Confidence 3479999999999986
No 250
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=56.64 E-value=3.8 Score=37.86 Aligned_cols=15 Identities=20% Similarity=0.251 Sum_probs=13.6
Q ss_pred EEEEeCCCceeeeec
Q 039039 95 HLVLDLDHTLLHSRW 109 (398)
Q Consensus 95 ~LVLDLD~TLihs~~ 109 (398)
+++||+||||+++..
T Consensus 34 ~viFD~dGTL~ds~~ 48 (287)
T 3a1c_A 34 AVIFDKTGTLTKGKP 48 (287)
T ss_dssp EEEEECCCCCBCSCC
T ss_pred EEEEeCCCCCcCCCE
Confidence 799999999999874
No 251
>3t7k_A RTT107, regulator of TY1 transposition protein 107; BRCT, DNA repair, phospho-peptide, protein binding; HET: SEP; 2.03A {Saccharomyces cerevisiae} PDB: 3t7j_A* 3t7i_A
Probab=54.79 E-value=20 Score=33.16 Aligned_cols=82 Identities=16% Similarity=0.112 Sum_probs=54.5
Q ss_pred hhhheeccccee---EEecCCCCCCchhhHHHHHHhCCEEeeecCC--------------------CccEEEECCCCC--
Q 039039 308 AKIRSRILMGCT---ILFGDDDFEELPLTWSRAEEMGAICTLVTDA--------------------SITHVVSSNTQS-- 362 (398)
Q Consensus 308 ~~~r~~vl~g~~---i~fSg~~~~~~~~l~~la~~lGa~~~~~~~~--------------------~vTHlVa~~~~t-- 362 (398)
.+.+.++|+|.. |.++.-.|++-..+..+++++||.-.+.+.. ...+++.+...+
T Consensus 129 ~~~~gkLf~~~~I~ciNls~dI~GG~e~issIleahG~~~~~~l~~~~~~~~dl~~n~~~~~~~~~~~~~ILia~K~~q~ 208 (256)
T 3t7k_A 129 TKLPTKVFERANIRCINLVNDIPGGVDTIGSVLKAHGIEKINVLRSKKCTFEDIIPNDVSKQENGGIFKYVLIVTKASQV 208 (256)
T ss_dssp TTSSSCHHHHTTCCEEEEETTCTTCHHHHHHHHHHTTCCEEEEECTTTCCGGGCCCCC--------CCSEEEECSCHHHH
T ss_pred hccccccccCCcceeeeeccCCCCCHHHHHHHHHHcCCceeeecccccccHHHhhhccccccccCCCCCEEEEEccHHHH
Confidence 455678999994 5558888888889999999999964333322 233555544322
Q ss_pred HHHHHHHh-----CCCeeeChhHHHHHHHhcC
Q 039039 363 ETFEWAEQ-----ENKCLVHPQWINDAYFLWC 389 (398)
Q Consensus 363 ~K~~~A~~-----~gi~IV~~~WL~~c~~~~~ 389 (398)
.+++...+ ..+-+|.=+|...|+...+
T Consensus 209 k~Fkk~~~~~~~n~~~lvveWdWCVksIF~le 240 (256)
T 3t7k_A 209 KKFTKLINDRDKNETILIVEWNWCVESIFHLN 240 (256)
T ss_dssp HHHHHHHHHHSTTSCEEEECHHHHHHHHHTTS
T ss_pred HHHHHHhhcccccceEEEEEcHHHHHHHhhee
Confidence 12333332 2468999999999988654
No 252
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=52.83 E-value=15 Score=37.93 Aligned_cols=41 Identities=15% Similarity=0.130 Sum_probs=36.9
Q ss_pred eEEEEeCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHh-C
Q 039039 150 VLLVKLRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLL-D 191 (398)
Q Consensus 150 ~~~vklRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~L-D 191 (398)
..|+..-|.+..+|+++ +.. .+.|-|++...|++.+++.+ +
T Consensus 242 ekYv~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg 284 (555)
T 2jc9_A 242 EKYVVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFD 284 (555)
T ss_dssp HHHBCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTC
T ss_pred HHhcCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcC
Confidence 46778889999999999 556 99999999999999999998 5
No 253
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=39.06 E-value=24 Score=27.59 Aligned_cols=42 Identities=17% Similarity=0.212 Sum_probs=35.9
Q ss_pred CccHHHHHHHhhccccEEEEcCC-----cHHHHHHHHHHhCCCCCcc
Q 039039 156 RPFVRSFLEEASRLFEISVCTMG-----NREYATRAVKLLDPDCKYF 197 (398)
Q Consensus 156 RPgl~eFL~~~s~~yEi~I~T~g-----~~~YA~~il~~LDP~~~~F 197 (398)
=|.+.++++.+-+...++|||.+ .=.|+..+.++|+-.|.-|
T Consensus 4 s~~~~~~v~~~i~~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~ 50 (109)
T 3ipz_A 4 TPQLKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPF 50 (109)
T ss_dssp CHHHHHHHHHHHTSSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHccCCEEEEEecCCCCCCChhHHHHHHHHHHcCCCc
Confidence 37789999999999999999998 5789999999998777444
No 254
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=38.96 E-value=18 Score=34.53 Aligned_cols=51 Identities=10% Similarity=0.118 Sum_probs=42.5
Q ss_pred EeCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHh------CCCCCccceeEEEcc
Q 039039 154 KLRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLL------DPDCKYFNSRIITRE 205 (398)
Q Consensus 154 klRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~L------DP~~~~F~~ri~srd 205 (398)
.+.|+..+.++.+ ++.++++|.|++.+..+++++..+ .|++ .++.++..+.
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~-ViG~~~~~~~ 200 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPEN-VIGVTTLLKN 200 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGG-EEEECEEEEC
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHH-eEeeeeeeec
Confidence 6889999999999 789999999999999999999764 4554 6777766443
No 255
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=38.87 E-value=1.7 Score=38.82 Aligned_cols=76 Identities=11% Similarity=0.036 Sum_probs=46.5
Q ss_pred eCccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCccc--eeEEEccCC------CCccccccccccCCCCcEE
Q 039039 155 LRPFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYFN--SRIITREDF------KQKERKCLDLVLGQESSIV 226 (398)
Q Consensus 155 lRPgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F~--~ri~srd~~------~~~~~K~L~~l~~~~~~vv 226 (398)
..|++.++|+.+.+.+.+ |.|+..+.++...+..++... +|. ..+++.++. ...+.+-+++++.+++.++
T Consensus 123 ~~~~~~~~l~~l~~~~~~-i~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~ 200 (259)
T 2ho4_A 123 HYQLLNQAFRLLLDGAPL-IAIHKARYYKRKDGLALGPGP-FVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAV 200 (259)
T ss_dssp BHHHHHHHHHHHHTTCCE-EESCCCSEEEETTEEEECSHH-HHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEE
T ss_pred CHHHHHHHHHHHHCCCEE-EEECCCCcCcccCCcccCCcH-HHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEE
Confidence 458999999999888888 999987665544333332221 231 011111211 1124445566667889999
Q ss_pred EEeCCc
Q 039039 227 IVDDTE 232 (398)
Q Consensus 227 IiDD~~ 232 (398)
+|.|++
T Consensus 201 ~iGD~~ 206 (259)
T 2ho4_A 201 MIGDDC 206 (259)
T ss_dssp EEESCT
T ss_pred EECCCc
Confidence 999997
No 256
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=35.13 E-value=12 Score=36.51 Aligned_cols=37 Identities=11% Similarity=0.055 Sum_probs=21.5
Q ss_pred eCccHHHHHHHhhccccEEEEcC------CcHHHHHHHHHHhC
Q 039039 155 LRPFVRSFLEEASRLFEISVCTM------GNREYATRAVKLLD 191 (398)
Q Consensus 155 lRPgl~eFL~~~s~~yEi~I~T~------g~~~YA~~il~~LD 191 (398)
.|..+...+..+..+|+.++.+. -.++.-..+++.++
T Consensus 132 ~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg 174 (555)
T 3i28_A 132 ERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLK 174 (555)
T ss_dssp THHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHT
T ss_pred hhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcC
Confidence 34455666667788899866541 22334455666654
No 257
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=29.43 E-value=18 Score=34.50 Aligned_cols=18 Identities=22% Similarity=0.231 Sum_probs=13.8
Q ss_pred cCceEEEEeCCCceeeee
Q 039039 91 MRKLHLVLDLDHTLLHSR 108 (398)
Q Consensus 91 ~~Kl~LVLDLD~TLihs~ 108 (398)
+++-.-|||+||||+...
T Consensus 23 ~~~riAVFD~DgTLi~~D 40 (327)
T 4as2_A 23 NKGAYAVFDMDNTSYRYD 40 (327)
T ss_dssp TSSCEEEECCBTTTEESC
T ss_pred CCCCEEEEeCCCCeeCCC
Confidence 345578999999999543
No 258
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=27.03 E-value=34 Score=27.39 Aligned_cols=38 Identities=13% Similarity=0.098 Sum_probs=32.4
Q ss_pred cHHHHHHHhhccccEEEEcCC-----cHHHHHHHHHHhCCCCC
Q 039039 158 FVRSFLEEASRLFEISVCTMG-----NREYATRAVKLLDPDCK 195 (398)
Q Consensus 158 gl~eFL~~~s~~yEi~I~T~g-----~~~YA~~il~~LDP~~~ 195 (398)
++.++++++-+...|+|||.+ .=.|+..+.++|+-.+.
T Consensus 8 ~~~~~v~~~i~~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv 50 (118)
T 2wem_A 8 GSAEQLDALVKKDKVVVFLKGTPEQPQCGFSNAVVQILRLHGV 50 (118)
T ss_dssp -CHHHHHHHHHHSSEEEEESBCSSSBSSHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHhccCCEEEEEecCCCCCccHHHHHHHHHHHHcCC
Confidence 578999999888899999998 67899999999987664
No 259
>2k2w_A Recombination and DNA repair protein; BRCT domain, cell cycle checkpoint; NMR {Xenopus laevis}
Probab=26.73 E-value=59 Score=26.42 Aligned_cols=34 Identities=15% Similarity=0.023 Sum_probs=26.8
Q ss_pred hheecccceeEEecCCCCCCchhhHHHHHHhCCEEe
Q 039039 310 IRSRILMGCTILFGDDDFEELPLTWSRAEEMGAICT 345 (398)
Q Consensus 310 ~r~~vl~g~~i~fSg~~~~~~~~l~~la~~lGa~~~ 345 (398)
.|+++|+|.+++| +.+.+...+..++..-||.+.
T Consensus 9 ~~~~LF~GKtFvF--Ln~KQ~kkl~~aV~~~GG~~~ 42 (118)
T 2k2w_A 9 KRKSIFKDKVFLF--LNAKQYKKLSPAVLFGGGKTD 42 (118)
T ss_dssp CCSCSSTTCEEEE--SCSSTHHHHHHHHHHTTCEEE
T ss_pred hHHhhccCCEEEE--eCHHHHHHHHHHHHhcCceEE
Confidence 3678999999999 555556677888888888874
No 260
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=21.28 E-value=83 Score=26.34 Aligned_cols=35 Identities=17% Similarity=0.118 Sum_probs=25.5
Q ss_pred eCccH-HHHHHHhh-ccccEEEEcCCc--HHHHHHHHHH
Q 039039 155 LRPFV-RSFLEEAS-RLFEISVCTMGN--REYATRAVKL 189 (398)
Q Consensus 155 lRPgl-~eFL~~~s-~~yEi~I~T~g~--~~YA~~il~~ 189 (398)
++|.+ .++++.+. ..+.+.|.|+|+ .+.++.+++.
T Consensus 16 l~~~~~~~l~~~~~~~g~~~~l~TNG~l~~~~~~~l~~~ 54 (182)
T 3can_A 16 LHPEFLIDILKRCGQQGIHRAVDTTLLARKETVDEVMRN 54 (182)
T ss_dssp GSHHHHHHHHHHHHHTTCCEEEECTTCCCHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCCCHHHHHHHHhh
Confidence 56776 69999984 568999999998 3455555543
No 261
>3v2d_5 50S ribosomal protein L32; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_4 2hgj_4 2hgu_4 2j03_5 2jl6_5 2jl8_5 2v47_5 2v49_5 2wdi_5 2wdj_5 2wdl_5 2wdn_5 2wh2_5 2wh4_5 2wrj_5 2wrl_5 2wro_5 2wrr_5 2x9s_5 2x9u_5 ...
Probab=21.03 E-value=45 Score=23.71 Aligned_cols=27 Identities=19% Similarity=0.342 Sum_probs=20.9
Q ss_pred CCCceeeccccCCCCcceeecccccccccc
Q 039039 25 RLPLLSVSEEHTICQHATILNGMCVVCDKL 54 (398)
Q Consensus 25 ~~p~~~~~~~~~~C~H~~~~~~~C~~Cg~~ 54 (398)
..|.+..+. .|......+-+|..||.-
T Consensus 26 ~~p~l~~c~---~cGe~~~~H~vc~~CG~Y 52 (60)
T 3v2d_5 26 TPPTLVPCP---ECKAMKPPHTVCPECGYY 52 (60)
T ss_dssp CCCCCEECT---TTCCEECTTSCCTTTCEE
T ss_pred cCCceeECC---CCCCeecceEEcCCCCcC
Confidence 356666655 788888899999999943
No 262
>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A
Probab=20.97 E-value=97 Score=31.15 Aligned_cols=54 Identities=19% Similarity=0.014 Sum_probs=42.9
Q ss_pred ceEEEEeCccHHHHHHHh-hccccEEEEcCCcHHHHHHHHHHh-CC-------CCCccceeEEE
Q 039039 149 NVLLVKLRPFVRSFLEEA-SRLFEISVCTMGNREYATRAVKLL-DP-------DCKYFNSRIIT 203 (398)
Q Consensus 149 ~~~~vklRPgl~eFL~~~-s~~yEi~I~T~g~~~YA~~il~~L-DP-------~~~~F~~ri~s 203 (398)
..-|+..-|.+..+|+++ +..=.+.+-|++.-.|++.+++.+ || ...|| +-|++
T Consensus 181 p~kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlF-DvVIv 243 (470)
T 4g63_A 181 LKKYVIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLF-EFVIT 243 (470)
T ss_dssp HHHHEECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGC-SEEEE
T ss_pred HHHHhhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhc-CEEEE
Confidence 356777889999999999 455679999999999999999884 33 34578 66664
No 263
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=20.39 E-value=67 Score=24.64 Aligned_cols=41 Identities=7% Similarity=-0.041 Sum_probs=34.3
Q ss_pred ccHHHHHHHhhccccEEEEcCCcHHHHHHHHHHhCCCCCcc
Q 039039 157 PFVRSFLEEASRLFEISVCTMGNREYATRAVKLLDPDCKYF 197 (398)
Q Consensus 157 Pgl~eFL~~~s~~yEi~I~T~g~~~YA~~il~~LDP~~~~F 197 (398)
+-+.+|++++.+.-.|.|||...=.|+..+...|+-.+.-|
T Consensus 6 ~~~~~~~~~~i~~~~v~vy~~~~Cp~C~~~~~~L~~~~i~~ 46 (113)
T 3rhb_A 6 SRMEESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQP 46 (113)
T ss_dssp CHHHHHHHHHHHHSSEEEEECTTCHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHhcCCEEEEECCCChhHHHHHHHHHHcCCCC
Confidence 56788999997777899999999999999999998666433
No 264
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=20.10 E-value=1e+02 Score=27.11 Aligned_cols=75 Identities=5% Similarity=-0.068 Sum_probs=44.0
Q ss_pred eCccHHHHHHHhhccccEEEEcCCcHHH--HHHH-HHHhCCCCCccceeEEEccCCC------CccccccccccCCCCcE
Q 039039 155 LRPFVRSFLEEASRLFEISVCTMGNREY--ATRA-VKLLDPDCKYFNSRIITREDFK------QKERKCLDLVLGQESSI 225 (398)
Q Consensus 155 lRPgl~eFL~~~s~~yEi~I~T~g~~~Y--A~~i-l~~LDP~~~~F~~ri~srd~~~------~~~~K~L~~l~~~~~~v 225 (398)
..|++.++|+.+.+.+.+ |.|++.+.+ +..+ .+..+- ..+| +.+++.++.. ..+.+-+++++.+++.+
T Consensus 127 ~~~~~~~~l~~l~~g~~~-i~tn~~~~~~~~~~~~~~~~~l-~~~f-~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 203 (264)
T 1yv9_A 127 SYEKVVLATLAIQKGALF-IGTNPDKNIPTERGLLPGAGSV-VTFV-ETATQTKPVYIGKPKAIIMERAIAHLGVEKEQV 203 (264)
T ss_dssp CHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHH-HHHH-HHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGE
T ss_pred CHHHHHHHHHHHhCCCEE-EEECCCCcccCCCCcccCCcHH-HHHH-HHHhCCCccccCCCCHHHHHHHHHHcCCCHHHE
Confidence 569999999999888887 889988744 2110 000000 0123 1122222211 12344556666788999
Q ss_pred EEEeCCc
Q 039039 226 VIVDDTE 232 (398)
Q Consensus 226 vIiDD~~ 232 (398)
++|+|++
T Consensus 204 ~~vGD~~ 210 (264)
T 1yv9_A 204 IMVGDNY 210 (264)
T ss_dssp EEEESCT
T ss_pred EEECCCc
Confidence 9999994
No 265
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=20.01 E-value=64 Score=25.71 Aligned_cols=38 Identities=16% Similarity=0.235 Sum_probs=32.1
Q ss_pred ccHHHHHHHhhccccEEEEcCC-----cHHHHHHHHHHhCCCC
Q 039039 157 PFVRSFLEEASRLFEISVCTMG-----NREYATRAVKLLDPDC 194 (398)
Q Consensus 157 Pgl~eFL~~~s~~yEi~I~T~g-----~~~YA~~il~~LDP~~ 194 (398)
|-+.++++.+-+...|+|||.+ .=.|+..+.++|+-.|
T Consensus 3 ~~~~~~v~~~i~~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~g 45 (121)
T 3gx8_A 3 TEIRKAIEDAIESAPVVLFMKGTPEFPKCGFSRATIGLLGNQG 45 (121)
T ss_dssp HHHHHHHHHHHHSCSEEEEESBCSSSBCTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccCCEEEEEeccCCCCCCccHHHHHHHHHHcC
Confidence 5578899999999999999998 5678888888887655
Done!