BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>039042
GLFLEKLEKYRIRSGDWYWESTNIWRREFRLRLNNKICLKDWLILQLQGIEDLELHELQE
QDVNYFANELVRVGSSQLKFLGIHGCRDALNPSAESKRQRQEESANDMQSNELILEDNAN
ISNTLFLEKLEKLELRSINIERIWRNQVAAMTCGIQNLTHLTLYNCMNLRCLFSSCTVSN
NSFVRLQYIRIEKCHVLEELIVVDNQEEERKNNIVMFPQLQYLKMYDLEKLTSFCTGDVH
MLEFPSLKELWISRCPEFMVRFKRTTNDLTKKVFPNLEELIVDAEYIITNKFIFSEDLLC
KLKCLDVEFVDELTTILSLDDFLQRFPTLKVLQIEGYSDWLPKEKVENGMEVIIRRVFRC
YDLKYILKQESSIMNNLVILHVTNCHRLINLVPSSTSFQNLTSLEISYCNGLKNVLTFSI
AKTLVRLREMKIESCAMITEIVLADDDDDHDAAKDEVIAFSELNELKLLNLKSLRSFYSG
NRALNFPSLERLLVDDCTNMKGFSRGELSTPVLHKVQLNRWDEACW

High Scoring Gene Products

Symbol, full name Information P value
AT3G14460 protein from Arabidopsis thaliana 0.00071

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039042
        (526 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2091662 - symbol:AT3G14460 species:3702 "Arabi...   100  0.00071   2


>TAIR|locus:2091662 [details] [associations]
            symbol:AT3G14460 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006952 "defense response"
            evidence=IEA;ISS] [GO:0043531 "ADP binding" evidence=IEA]
            Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000767
            InterPro:IPR002182 Pfam:PF00931 PRINTS:PR00364 GO:GO:0005524
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006952 GO:GO:0043531
            InterPro:IPR025875 Pfam:PF12799 EMBL:AB028617 IPI:IPI00537428
            RefSeq:NP_188064.1 UniGene:At.65087 ProteinModelPortal:Q9LRR5
            SMR:Q9LRR5 PRIDE:Q9LRR5 EnsemblPlants:AT3G14460.1 GeneID:820669
            KEGG:ath:AT3G14460 TAIR:At3g14460 eggNOG:NOG295903
            HOGENOM:HOG000238375 InParanoid:Q9LRR5 OMA:AVISARY PhylomeDB:Q9LRR5
            ProtClustDB:CLSN2684935 Genevestigator:Q9LRR5 GermOnline:AT3G14460
            Uniprot:Q9LRR5
        Length = 1424

 Score = 100 (40.3 bits), Expect = 0.00071, Sum P(2) = 0.00071
 Identities = 33/105 (31%), Positives = 54/105 (51%)

Query:   158 LTHLTLYNCMNLRCLFSSCTVSNNSFVRLQYIRIEKCHVLEELIVVDNQEEERKNNIVMF 217
             +T +TL +C NL C+ S   V       L+Y+ IEK ++L++ + +D    E  +  V F
Sbjct:   786 ITSVTLSSC-NL-CI-SLPPVGQ--LPSLKYLSIEKFNILQK-VGLDFFFGENNSRGVPF 839

Query:   218 PQLQYLKMYDLEKLTSFCTGDVHMLEFPSLKELWISRCPEFMVRF 262
               LQ LK Y + +   +   ++    FP L++L I RCP    +F
Sbjct:   840 QSLQILKFYGMPRWDEWICPELEDGIFPCLQKLIIQRCPSLRKKF 884

 Score = 73 (30.8 bits), Expect = 0.00071, Sum P(2) = 0.00071
 Identities = 41/161 (25%), Positives = 69/161 (42%)

Query:   283 DAEYIITNKFIFSEDLLCKLKCLDVEFVDELTTILSLDDFLQRFPTL-KVLQIEGYS-DW 340
             D EY+         +L   L+ L ++  D LT++   ++  + +P L ++L I  +S + 
Sbjct:  1074 DMEYLKVTDISHLMELPQNLQSLHIDSCDGLTSLP--ENLTESYPNLHELLIIACHSLES 1131

Query:   341 LPKEKVENGMEVIIRRVFRCYDLKYILK-QESSIMNNLVILHV-TNCHRLINLVPSSTSF 398
              P       ++ +  R   C  L +    Q +   + L  L + ++C  L+N  P S  F
Sbjct:  1132 FPGSHPPTTLKTLYIR--DCKKLNFTESLQPTRSYSQLEYLFIGSSCSNLVNF-PLSL-F 1187

Query:   399 QNLTSLEISYCNGLKNVLTFSIAKTL----VRLREMKIESC 435
               L SL I  C   K   TFSI   L    + L  ++I  C
Sbjct:  1188 PKLRSLSIRDCESFK---TFSIHAGLGDDRIALESLEIRDC 1225


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.138   0.415    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      526       477   0.00079  119 3  11 22  0.47    33
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  624 (66 KB)
  Total size of DFA:  300 KB (2153 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  41.80u 0.15s 41.95t   Elapsed:  00:00:02
  Total cpu time:  41.80u 0.15s 41.95t   Elapsed:  00:00:02
  Start:  Fri May 10 06:18:36 2013   End:  Fri May 10 06:18:38 2013

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