BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039044
(194 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38942|RAE1L_ARATH Rae1-like protein At1g80670 OS=Arabidopsis thaliana GN=At1g80670
PE=2 SV=2
Length = 349
Score = 351 bits (900), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 162/189 (85%), Positives = 173/189 (91%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
DS+SSL FSP+A+ILVATSWDNQVRCWEISR G +AS PKASISHD PVLCS WKDDGT
Sbjct: 26 DSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGT 85
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ 120
TVFSGGCDKQ KMWPLLSGGQPVTVAMH+ PI +AWIP MNLLATGSWDKTLKYWDTRQ
Sbjct: 86 TVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQ 145
Query: 121 PNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAA 180
NPVHTQQLPD+CY L+V++PLMVVGTADRNL+VFNLQNPQTEFKRI SPLKYQTRCV A
Sbjct: 146 QNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKYQTRCVTA 205
Query: 181 FPDQQGFLV 189
FPDQQGFLV
Sbjct: 206 FPDQQGFLV 214
>sp|Q5FVA9|RAE1L_XENTR mRNA export factor OS=Xenopus tropicalis GN=rae1 PE=2 SV=1
Length = 368
Score = 202 bits (513), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 127/191 (66%), Gaps = 9/191 (4%)
Query: 1 DSVSSLCFSPK---ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD 57
DS+S L FSP N L+A SW N VRCWE+ G ++PKA H PVL W D
Sbjct: 40 DSISCLSFSPPTLPGNFLIAGSWANDVRCWEVQDNGQ---TIPKAQQMHTGPVLDVCWSD 96
Query: 58 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKY 115
DG+ VF+ CDK KMW L S Q + +A HDAPIK V W+ P + + TGSWDK+LK+
Sbjct: 97 DGSKVFTASCDKTAKMWDLNSN-QSIQIAQHDAPIKTVHWVKAPNYSCIMTGSWDKSLKF 155
Query: 116 WDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQT 175
WDTR PNP+ T QLP+RCY V YP+ VV TA+R L+V+ L+N +EF+RI+SPLK+Q
Sbjct: 156 WDTRSPNPLLTLQLPERCYCADVVYPMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQH 215
Query: 176 RCVAAFPDQQG 186
RCVA F D+Q
Sbjct: 216 RCVAIFKDKQN 226
>sp|Q5RF99|RAEL1_PONAB mRNA export factor OS=Pongo abelii GN=RAE1 PE=2 SV=1
Length = 368
Score = 197 bits (501), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 123/190 (64%), Gaps = 9/190 (4%)
Query: 1 DSVSSLCFSPK---ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD 57
DS+ L FSP N L+A SW N VRCWE+ G ++PKA H PVL W D
Sbjct: 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSD 96
Query: 58 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKY 115
DG+ VF+ CDK KMW L S Q + +A HDAP+K + WI P + + TGSWDKTLK+
Sbjct: 97 DGSKVFTASCDKTAKMWDL-SSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKF 155
Query: 116 WDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQT 175
WDTR NP+ QLP+RCY V YP+ VV TA+R L+V+ L+N +EF+RI SPLK+Q
Sbjct: 156 WDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQH 215
Query: 176 RCVAAFPDQQ 185
RCVA F D+Q
Sbjct: 216 RCVAIFKDKQ 225
>sp|P78406|RAE1L_HUMAN mRNA export factor OS=Homo sapiens GN=RAE1 PE=1 SV=1
Length = 368
Score = 197 bits (501), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 123/190 (64%), Gaps = 9/190 (4%)
Query: 1 DSVSSLCFSPK---ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD 57
DS+ L FSP N L+A SW N VRCWE+ G ++PKA H PVL W D
Sbjct: 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSD 96
Query: 58 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKY 115
DG+ VF+ CDK KMW L S Q + +A HDAP+K + WI P + + TGSWDKTLK+
Sbjct: 97 DGSKVFTASCDKTAKMWDL-SSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKF 155
Query: 116 WDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQT 175
WDTR NP+ QLP+RCY V YP+ VV TA+R L+V+ L+N +EF+RI SPLK+Q
Sbjct: 156 WDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQH 215
Query: 176 RCVAAFPDQQ 185
RCVA F D+Q
Sbjct: 216 RCVAIFKDKQ 225
>sp|Q7ZWF0|RAE1L_DANRE mRNA export factor OS=Danio rerio GN=rae1 PE=2 SV=2
Length = 368
Score = 197 bits (501), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 124/190 (65%), Gaps = 9/190 (4%)
Query: 1 DSVSSLCFSPK---ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD 57
DS+S L FSP N L+ SW N VRCWE+ G +VPKA H PVL W D
Sbjct: 40 DSISCLAFSPPTMPGNFLIGGSWANDVRCWEVQDNG---QTVPKAQQMHTGPVLDVCWSD 96
Query: 58 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKY 115
DG+ VF+ CDK KMW L S Q + +A H+ PI+ + WI P + + TGSWDKTLK+
Sbjct: 97 DGSKVFTASCDKTAKMWDLNSN-QAIQIAQHEGPIRTIHWIKAPNYSCIMTGSWDKTLKF 155
Query: 116 WDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQT 175
WDTR PNP+ + Q+P+RCY V YP+ VV TA+R L+V+ L+N +EF+RI SPLK+Q
Sbjct: 156 WDTRSPNPMMSLQMPERCYCADVVYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQH 215
Query: 176 RCVAAFPDQQ 185
RCVA F D+Q
Sbjct: 216 RCVAIFKDKQ 225
>sp|A5GFN6|RAEL1_PIG mRNA export factor OS=Sus scrofa GN=RAE1 PE=3 SV=1
Length = 368
Score = 196 bits (499), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 123/190 (64%), Gaps = 9/190 (4%)
Query: 1 DSVSSLCFSPK---ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD 57
DS+ L FSP N L+A SW N VRCWE+ G ++PKA H PVL W D
Sbjct: 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSG---QTIPKAQQMHTGPVLDVCWSD 96
Query: 58 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKY 115
DG+ VF+ CDK KMW L S Q + +A HDAP+K + WI P + + TGSWDKTLK+
Sbjct: 97 DGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKF 155
Query: 116 WDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQT 175
WDTR NP+ QLP+RCY V YP+ VV TA+R L+V+ L+N +EF+RI SPLK+Q
Sbjct: 156 WDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQH 215
Query: 176 RCVAAFPDQQ 185
RCVA F D+Q
Sbjct: 216 RCVAIFKDKQ 225
>sp|Q5E9A4|RAE1L_BOVIN mRNA export factor OS=Bos taurus GN=RAE1 PE=2 SV=1
Length = 368
Score = 196 bits (499), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/191 (51%), Positives = 123/191 (64%), Gaps = 9/191 (4%)
Query: 1 DSVSSLCFSPK---ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD 57
DS+ L FSP N L+A SW N VRCWE+ G ++PKA H PVL W D
Sbjct: 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSD 96
Query: 58 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKY 115
DG+ VF+ CDK KMW L S Q + +A HDAP+K V WI P + + TGSWDKTLK+
Sbjct: 97 DGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTVHWIKAPNYSCVMTGSWDKTLKF 155
Query: 116 WDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQT 175
WDTR NP+ QLP+RCY V YP+ VV TA+R L+V+ L+N +EF+RI SPLK+Q
Sbjct: 156 WDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQH 215
Query: 176 RCVAAFPDQQG 186
RCVA F D+Q
Sbjct: 216 RCVAIFKDKQN 226
>sp|Q3SWS8|RAE1L_RAT mRNA export factor OS=Rattus norvegicus GN=Rae1 PE=2 SV=1
Length = 368
Score = 196 bits (499), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 123/190 (64%), Gaps = 9/190 (4%)
Query: 1 DSVSSLCFSPK---ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD 57
DS+ L FSP N L+A SW N VRCWE+ G ++PKA H PVL W D
Sbjct: 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSD 96
Query: 58 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKY 115
DG+ VF+ CDK KMW L S Q + +A HDAP+K + WI P + + TGSWDKTLK+
Sbjct: 97 DGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKF 155
Query: 116 WDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQT 175
WDTR NP+ QLP+RCY V YP+ VV TA+R L+V+ L+N +EF+RI SPLK+Q
Sbjct: 156 WDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQH 215
Query: 176 RCVAAFPDQQ 185
RCVA F D+Q
Sbjct: 216 RCVAIFKDKQ 225
>sp|Q8C570|RAE1L_MOUSE mRNA export factor OS=Mus musculus GN=Rae1 PE=1 SV=1
Length = 368
Score = 196 bits (499), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 98/191 (51%), Positives = 123/191 (64%), Gaps = 9/191 (4%)
Query: 1 DSVSSLCFSPK---ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD 57
DS+ L FSP N L+A SW N VRCWE+ G ++PKA H PVL W D
Sbjct: 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSD 96
Query: 58 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKY 115
DG+ VF+ CDK KMW L S Q + +A HDAP+K + WI P + + TGSWDKTLK+
Sbjct: 97 DGSKVFTASCDKTAKMWDLNSN-QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKF 155
Query: 116 WDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQT 175
WDTR NP+ QLP+RCY V YP+ VV TA+R L+V+ L+N +EF+RI SPLK+Q
Sbjct: 156 WDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQH 215
Query: 176 RCVAAFPDQQG 186
RCVA F D+Q
Sbjct: 216 RCVAIFKDKQN 226
>sp|Q4R6D2|RAE1L_MACFA mRNA export factor OS=Macaca fascicularis GN=RAE1 PE=2 SV=1
Length = 368
Score = 192 bits (488), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 121/190 (63%), Gaps = 9/190 (4%)
Query: 1 DSVSSLCFSPK---ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD 57
DS+ L FSP N L+A SW N VRCWE+ G ++PKA H PVL W D
Sbjct: 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSD 96
Query: 58 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKY 115
DG+ VF+ CDK KMW L S Q + +A HDAP+K + WI P + + TGSWDKTLK+
Sbjct: 97 DGSKVFTASCDKTAKMWDL-SSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKF 155
Query: 116 WDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQT 175
WDTR NP+ QLP+R Y V YP+ VV TA R L+V+ L+N +EF+RI SPLK+Q
Sbjct: 156 WDTRSSNPMMVLQLPERYYCADVIYPMAVVATAGRGLIVYQLENQPSEFRRIESPLKHQH 215
Query: 176 RCVAAFPDQQ 185
RCVA F D+Q
Sbjct: 216 RCVAIFKDKQ 225
>sp|P40066|GLE2_YEAST Nucleoporin GLE2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GLE2 PE=1 SV=1
Length = 365
Score = 173 bits (438), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 123/196 (62%), Gaps = 14/196 (7%)
Query: 1 DSVSSLCFSPKANILV-ATSWDNQVRCWEISRGGTGVASVPKASISHDH--PVLCSTWKD 57
DS+S + FSP+ + + A+SWD +VR W++ G VP+ H+ PVLC+ W +
Sbjct: 37 DSISDIAFSPQQDFMFSASSWDGKVRIWDVQNG------VPQGRAQHESSSPVLCTRWSN 90
Query: 58 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI----PEMNLLATGSWDKTL 113
DGT V SGGCD +K++ + SG Q + MH APIK + ++ + TGSWDKT+
Sbjct: 91 DGTKVASGGCDNALKLYDIASG-QTQQIGMHSAPIKVLRFVQCGPSNTECIVTGSWDKTI 149
Query: 114 KYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKY 173
KYWD RQP PV T +P+R Y++ + L+VV TA+R++ + NL NP T FK SPLK+
Sbjct: 150 KYWDMRQPQPVSTVMMPERVYSMDNKQSLLVVATAERHIAIINLANPTTIFKATTSPLKW 209
Query: 174 QTRCVAAFPDQQGFLV 189
QTRCVA + + G+ +
Sbjct: 210 QTRCVACYNEADGYAI 225
>sp|P41838|RAE1_SCHPO Poly(A)+ RNA export protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rae1 PE=1 SV=1
Length = 352
Score = 167 bits (422), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 116/192 (60%), Gaps = 7/192 (3%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
DS+S L FSP+A L A+SWD++VR +E+ G S+ KA H PVL W DGT
Sbjct: 31 DSISDLAFSPQAEYLAASSWDSKVRIYEVQATGQ---SIGKALYEHQGPVLSVNWSRDGT 87
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMN---LLATGSWDKTLKYWD 117
V SG DK K++ + +G Q VA HD ++ V ++ M +LATGSWDKTLKYWD
Sbjct: 88 KVASGSVDKSAKVFDIQTG-QNQQVAAHDDAVRCVRFVEAMGTSPILATGSWDKTLKYWD 146
Query: 118 TRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRC 177
RQ P+ T LP+R YA+ +PL+ V TA+RN+ V NL P FK SPLK+QTR
Sbjct: 147 LRQSTPIATVSLPERVYAMDCVHPLLTVATAERNICVINLSEPTKIFKLAMSPLKFQTRS 206
Query: 178 VAAFPDQQGFLV 189
+A F G+ +
Sbjct: 207 LACFIKGDGYAI 218
>sp|Q9YGY3|BUB3_XENLA Mitotic checkpoint protein BUB3 OS=Xenopus laevis GN=bub3 PE=1 SV=1
Length = 330
Score = 137 bits (346), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 118/191 (61%), Gaps = 11/191 (5%)
Query: 1 DSVSSLCFSPK-ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVL-CSTWKDD 58
D +S++ FSP + L+ +SWD+ VR +++ A+ + H PVL C+ + D
Sbjct: 21 DGISAVKFSPNTSQFLLVSSWDSSVRLYDVP------ANTMRLKYQHAGPVLDCAFY--D 72
Query: 59 GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 118
T +SGG D Q+KM L + G V V HDAPI+ V + PE+N++ TGSWD+T+K WD
Sbjct: 73 PTHAWSGGLDHQLKMHDLNTDGDTV-VGSHDAPIRCVEYCPEVNVIVTGSWDQTVKLWDP 131
Query: 119 RQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCV 178
R P T PD+ Y L+V ++VGTA R ++V++L+N +R S LKYQTRC+
Sbjct: 132 RTPCNAGTFSQPDKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCI 191
Query: 179 AAFPDQQGFLV 189
AFP++QG+++
Sbjct: 192 RAFPNKQGYVL 202
>sp|Q9WVA3|BUB3_MOUSE Mitotic checkpoint protein BUB3 OS=Mus musculus GN=Bub3 PE=2 SV=2
Length = 326
Score = 131 bits (329), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 115/191 (60%), Gaps = 11/191 (5%)
Query: 1 DSVSSLCFSPK-ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVL-CSTWKDD 58
D +SS+ FSP + L+ +SWD VR +++ A+ + H VL C+ + D
Sbjct: 15 DGISSVKFSPNTSQFLLVSSWDTSVRLYDVP------ANSMRLKYQHTGAVLDCAFY--D 66
Query: 59 GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 118
T +SGG D Q+KM L + Q V HDAPI+ V + PE+N++ TGSWD+T+K WD
Sbjct: 67 PTHAWSGGLDHQLKMHDL-NTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTVKLWDP 125
Query: 119 RQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCV 178
R P T P++ Y L+V ++VGTA R ++V++L+N +R S LKYQTRC+
Sbjct: 126 RTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCI 185
Query: 179 AAFPDQQGFLV 189
AFP++QG+++
Sbjct: 186 RAFPNKQGYVL 196
>sp|Q1JQB2|BUB3_BOVIN Mitotic checkpoint protein BUB3 OS=Bos taurus GN=BUB3 PE=2 SV=1
Length = 326
Score = 131 bits (329), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 115/191 (60%), Gaps = 11/191 (5%)
Query: 1 DSVSSLCFSPK-ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVL-CSTWKDD 58
D +SS+ FSP + L+ +SWD VR +++ A+ + H VL C+ + D
Sbjct: 15 DGISSVKFSPNTSQFLLVSSWDTSVRLYDVP------ANSMRLKYQHTGAVLDCAFY--D 66
Query: 59 GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 118
T +SGG D Q+KM L + Q V HDAPI+ V + PE+N++ TGSWD+T+K WD
Sbjct: 67 PTHAWSGGLDHQLKMHDL-NTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTVKLWDP 125
Query: 119 RQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCV 178
R P T P++ Y L+V ++VGTA R ++V++L+N +R S LKYQTRC+
Sbjct: 126 RTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCI 185
Query: 179 AAFPDQQGFLV 189
AFP++QG+++
Sbjct: 186 RAFPNKQGYVL 196
>sp|O43684|BUB3_HUMAN Mitotic checkpoint protein BUB3 OS=Homo sapiens GN=BUB3 PE=1 SV=1
Length = 328
Score = 130 bits (328), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 115/191 (60%), Gaps = 11/191 (5%)
Query: 1 DSVSSLCFSPK-ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVL-CSTWKDD 58
D +SS+ FSP + L+ +SWD VR +++ A+ + H VL C+ + D
Sbjct: 15 DGISSVKFSPNTSQFLLVSSWDTSVRLYDVP------ANSMRLKYQHTGAVLDCAFY--D 66
Query: 59 GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 118
T +SGG D Q+KM L + Q V HDAPI+ V + PE+N++ TGSWD+T+K WD
Sbjct: 67 PTHAWSGGLDHQLKMHDL-NTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTVKLWDP 125
Query: 119 RQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCV 178
R P T P++ Y L+V ++VGTA R ++V++L+N +R S LKYQTRC+
Sbjct: 126 RTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCI 185
Query: 179 AAFPDQQGFLV 189
AFP++QG+++
Sbjct: 186 RAFPNKQGYVL 196
>sp|Q5RB58|BUB3_PONAB Mitotic checkpoint protein BUB3 OS=Pongo abelii GN=BUB3 PE=2 SV=1
Length = 328
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 115/191 (60%), Gaps = 11/191 (5%)
Query: 1 DSVSSLCFSPK-ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVL-CSTWKDD 58
D +SS+ FSP + L+ +SWD VR +++ A+ + H VL C+ + D
Sbjct: 15 DGISSVKFSPNTSQFLLVSSWDTSVRLYDVP------ANSMRLKYQHTGAVLDCAFY--D 66
Query: 59 GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 118
T +SGG D Q+KM L + Q V HDAPI+ V + PE+N++ATGSWD+T+K WD
Sbjct: 67 PTHAWSGGLDHQLKMHDL-NTDQENLVGTHDAPIRCVEYCPEVNVMATGSWDQTVKLWDP 125
Query: 119 RQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCV 178
R P T P++ Y L+V ++VGTA R ++V++L+N +R S LKYQTRC+
Sbjct: 126 RTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCI 185
Query: 179 AAFPDQQGFLV 189
AF ++QG+++
Sbjct: 186 RAFLNKQGYVL 196
>sp|Q93454|NPP17_CAEEL Nucleoporin-17 OS=Caenorhabditis elegans GN=npp-17 PE=1 SV=1
Length = 373
Score = 123 bits (309), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 103/192 (53%), Gaps = 12/192 (6%)
Query: 1 DSVSSLCFSPKAN---ILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD 57
D++ + FSP +L SWD +R W + T KA + P+L W +
Sbjct: 43 DTIQVIKFSPTPQDKPMLACGSWDGTIRVWMFNDANTFEG---KAQQNIPAPILDIAWIE 99
Query: 58 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNL--LATGSWDKTLKY 115
D + +F DK+ ++W L S Q V HD P+K WI N L TGS+DKTL++
Sbjct: 100 DSSKIFIACADKEARLWDLASN-QVAVVGTHDGPVKTCHWINGNNYQCLMTGSFDKTLRF 158
Query: 116 WDTRQ-PNPVHTQQ--LPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLK 172
WD + PN Q LP+R YA V YP+ VV A++++ V+NL+N TE K I S LK
Sbjct: 159 WDMKNLPNQTQMAQIQLPERVYAADVLYPMAVVALANKHIKVYNLENGPTEVKDIESQLK 218
Query: 173 YQTRCVAAFPDQ 184
+Q RC++ F D+
Sbjct: 219 FQIRCISIFKDK 230
>sp|Q54DM1|BUB3_DICDI Mitotic checkpoint protein bub3 OS=Dictyostelium discoideum GN=bub3
PE=3 SV=1
Length = 331
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 11/193 (5%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
D +SS+ F P + L+ TSWD+ VRC++ +V K +H PV+ + +
Sbjct: 18 DGISSVNFCPNSVNLLVTSWDSTVRCYDTQN------NVQKWQYNHKGPVMDGCFPEK-N 70
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ 120
VFSG VK + ++G + V H+ ++ V + + L TG WD+ LK WD R
Sbjct: 71 KVFSGDVFGSVKHYDPVAGVEK-EVGSHEDGVRSVVYNSDTQQLFTGGWDQQLKLWDIRS 129
Query: 121 PN-PVHTQQLPDRCYALTVR--YPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRC 177
+ L + + + V ++V+GTAD+ + +++ + +T ++ S +KYQTRC
Sbjct: 130 DKMEISNHDLQSKIFTMDVSPISNMLVIGTADKYVTIYDTRQMETHLQKRESSIKYQTRC 189
Query: 178 VAAFPDQQGFLVC 190
+ F D +G+ +
Sbjct: 190 IRTFTDGKGYALA 202
>sp|O42860|BUB3_SCHPO Mitotic checkpoint protein bub3 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bub3 PE=1 SV=1
Length = 320
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 8/189 (4%)
Query: 1 DSVSSLCFSPKA-NILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDG 59
D +SS+ FSP N L+A WD + ++IS + +S P+L + D+
Sbjct: 13 DGISSVIFSPSVKNELIAGCWDGSLLHYQISENPELLGKYDLSS-----PILSLEYTDEK 67
Query: 60 TTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTR 119
T + G D V L + + H + ++ + N +GSWDK+ + WD R
Sbjct: 68 TALV-GNLDGTVTTLDLNTRNHEF-LGNHGKGVSCISKLRLENCFISGSWDKSFRVWDVR 125
Query: 120 QPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVA 179
PV Q + + +A + R ++V+G ++R +V++++N + F+R S KY TR V
Sbjct: 126 VKQPVEGQDIGKKIFASSSRDNILVLGCSERENLVYDIRNLKLPFQRRPSSFKYMTRSVC 185
Query: 180 AFPDQQGFL 188
+ +GF+
Sbjct: 186 CNQNFEGFV 194
>sp|Q9D994|WDR38_MOUSE WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1
Length = 303
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V S CFSP ++ ++S D+ +R W+++R + V K H V ++ D +
Sbjct: 71 VKSCCFSPDGRLIASSSSDHSIRLWDVAR--SKCLHVLKG---HQRSVETVSFSPDSKQL 125
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
SGG DK+ +W + SG + + H I+ + P + LATGSWD T+ WD R
Sbjct: 126 ASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRAST 185
Query: 123 PV--------HTQQLPDRCYALTVRYPLMVVGTADRNLVVFN 156
PV HT + CY+ + L+ G+ D+ + V+
Sbjct: 186 PVVSYHNLEGHTGNISCLCYSAS---GLLASGSWDKTICVWK 224
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
DS+ S FSP ++ L SWD+ V W++ R T V S H + C + G
Sbjct: 153 DSIQSSDFSPTSDSLATGSWDSTVHIWDL-RASTPVVSYHNLE-GHTGNISCLCYSASGL 210
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
+ SG DK + +W + P+ + H + +A+ P+ LA+ + +T+K WD
Sbjct: 211 -LASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWD 266
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 46 HDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLA 105
H V CS + DG T+ + D V +W SG +A H P+K + P+ L+A
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 106 TGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYP---LMVVGTADRNLVVFNLQNPQ 161
+ S D +++ WD + +H + R P + G D+ +V+ +Q+ +
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGR 143
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 7/117 (5%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
SV ++ FSP + L + WD + WE+ G + H + S + +
Sbjct: 112 SVETVSFSPDSKQLASGGWDKRAIVWEVQSG-----RRVHLLVGHCDSIQSSDFSPTSDS 166
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKYW 116
+ +G D V +W L + V+ + ++ + LLA+GSWDKT+ W
Sbjct: 167 LATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASGLLASGSWDKTICVW 223
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V + FSP IL + D V+ W + R G + K H+H V + DG T+
Sbjct: 687 VRFVVFSPDGEILASCGADENVKLWSV-RDGVCI----KTLTGHEHEVFSVAFHPDGETL 741
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
S DK +K+W + G T+ H ++ VA+ P+ N LA+ + D T+K WD Q
Sbjct: 742 ASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGK 801
Query: 123 PVHTQQLPD---RCYALTVRYPLMVVGTADRNLVVFNLQNPQ 161
+ T + R A + + G+ DR + ++N +
Sbjct: 802 CLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGE 843
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
D V + FSP N L +++ D+ ++ W++S+G + SH V + DG
Sbjct: 769 DWVRCVAFSPDGNTLASSAADHTIKLWDVSQG-----KCLRTLKSHTGWVRSVAFSADGQ 823
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
T+ SG D+ +K+W +G T H + +A+ P+ +L +GS D+T+K WD
Sbjct: 824 TLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWD 880
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
D + + FSP + L + S D+ VR W IS G + + H V + G
Sbjct: 979 DFIYGIAFSPDSQTLASASTDSSVRLWNISTG-----QCFQILLEHTDWVYAVVFHPQGK 1033
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
+ +G D VK+W + +G T++ H I +AW P+ LLA+ S D++++ WD
Sbjct: 1034 IIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWD 1090
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 58/125 (46%), Gaps = 5/125 (4%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
++ S FSP+ +L D VR WE+ G + H + V + DG
Sbjct: 644 NILSAAFSPEGQLLATCDTDCHVRVWEVKSG-----KLLLICRGHSNWVRFVVFSPDGEI 698
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP 121
+ S G D+ VK+W + G T+ H+ + VA+ P+ LA+ S DKT+K WD +
Sbjct: 699 LASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDG 758
Query: 122 NPVHT 126
+ T
Sbjct: 759 TCLQT 763
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 5/126 (3%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
D V ++ F P+ I+ S D V+ W IS G K H +L W DG
Sbjct: 1021 DWVYAVVFHPQGKIIATGSADCTVKLWNISTG-----QCLKTLSEHSDKILGMAWSPDGQ 1075
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ 120
+ S D+ V++W +G + H + + P ++AT S D+T+K WD +Q
Sbjct: 1076 LLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQ 1135
Query: 121 PNPVHT 126
+ T
Sbjct: 1136 GKCLKT 1141
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 7/118 (5%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGG-TGVASVPKASISHDHPVLCSTWKDDG 59
D + + +SP +L + S D VR W+ G G+ H + V + + +G
Sbjct: 1063 DKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILR------GHSNRVYSAIFSPNG 1116
Query: 60 TTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
+ + D+ VK+W G T+ H + ++A+ P+ +LA+ S D+T++ WD
Sbjct: 1117 EIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWD 1174
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
+ V S FSP I+ S D V+ W+ +G K H + V + DG
Sbjct: 1105 NRVYSAIFSPNGEIIATCSTDQTVKIWDWQQG-----KCLKTLTGHTNWVFDIAFSPDGK 1159
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTR 119
+ S D+ V++W + +G H + VA+ P+ ++A+GS D+T++ W+ +
Sbjct: 1160 ILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVK 1218
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
+SV S+ +SP + ILV+ S D ++ W+ K H + V + DG
Sbjct: 853 NSVYSIAYSPDSKILVSGSGDRTIKLWDCQ-----THICIKTLHGHTNEVCSVAFSPDGQ 907
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
T+ D+ V++W +G + VA+ P+ +LA+GS DKT+K WD
Sbjct: 908 TLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWD 964
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V + FSP IL + S D VR W+++ G I H H V + DG V
Sbjct: 1149 VFDIAFSPDGKILASASHDQTVRIWDVNTG-----KCHHICIGHTHLVSSVAFSPDGEVV 1203
Query: 63 FSGGCDKQVKMWPLLSG 79
SG D+ V++W + +G
Sbjct: 1204 ASGSQDQTVRIWNVKTG 1220
>sp|Q5JTN6|WDR38_HUMAN WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1
Length = 314
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 16/157 (10%)
Query: 8 FSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGC 67
FSP ++ + S D VR W+++R A + H V ++ D + SGG
Sbjct: 71 FSPDGHLFASASCDCTVRLWDVAR-----AKCLRVLKGHQRSVETVSFSPDSRQLASGGW 125
Query: 68 DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV--- 124
DK+V +W + SG + H I+ + P +N LATGSWD T+ WD R P
Sbjct: 126 DKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSH 185
Query: 125 -----HTQQLPDRCYALTVRYPLMVVGTADRNLVVFN 156
H+ + CY+ + L+ G+ D+ + ++
Sbjct: 186 QALEGHSANISCLCYSAS---GLLASGSWDKTIHIWK 219
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 8/155 (5%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
DS+ S FSP N L SWD+ V W++ V+ +A H + C + G
Sbjct: 148 DSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSH--QALEGHSANISCLCYSASG- 204
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ 120
+ SG DK + +W + + + H +K +A+ P+ LA+ + + +K WD
Sbjct: 205 LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLASAGYSRMVKVWDCNT 264
Query: 121 PNPVHTQQ----LPDRCYALTVRYPLMVVGTADRN 151
+ T + + C A T ++V G AD+
Sbjct: 265 GKCLETLKGVLDVAHTC-AFTPDGKILVSGAADQT 298
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
SV ++ FSP + L + WD +V W++ G + + + H + S +
Sbjct: 107 SVETVSFSPDSRQLASGGWDKRVMLWDVQSG-----QMLRLLVGHRDSIQSSDFSPTVNC 161
Query: 62 VFSGGCDKQVKMWPLLSGGQPVT---VAMHDAPIKEVAWIPEMNLLATGSWDKTLKYW 116
+ +G D V +W L V+ + H A I + + LLA+GSWDKT+ W
Sbjct: 162 LATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCLCYSAS-GLLASGSWDKTIHIW 218
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 46 HDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLA 105
H V S + DG + +G D V W SG + H P+K + P+ +L A
Sbjct: 20 HGGEVNSSAFSPDGQMLLTGSEDGCVYGWETRSGQLLWRLGGHTGPVKFCRFSPDGHLFA 79
Query: 106 TGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYP---LMVVGTADRNLVVFNLQNPQ 161
+ S D T++ WD + + + R P + G D+ ++++++Q+ Q
Sbjct: 80 SASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQ 138
>sp|P78706|RCO1_NEUCR Transcriptional repressor rco-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rco-1 PE=4 SV=2
Length = 604
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 18/198 (9%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
+ S+CFSP L + D +R W+I ++ H+ + + DG T+
Sbjct: 347 IRSVCFSPDGKYLATGAEDKLIRVWDIQS-----RTIRNTFHGHEQDIYSLDFSRDGRTI 401
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTR--- 119
SG D+ V++W + +G +++ D + VA P+ +A GS DK+++ WD R
Sbjct: 402 ASGSGDRTVRLWDIETGQNTSVLSIEDG-VTTVAISPDKQFVAAGSLDKSVRVWDMRGYL 460
Query: 120 ----QPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQT 175
+ H + ++ R +V G+ D+ + ++ L P+ ++P K
Sbjct: 461 AERLEGPDGHKDSVYSVAFSPDGRN--LVSGSLDKTIKMWELSAPRGIPS--SAPPK-GG 515
Query: 176 RCVAAFPDQQGFLVCIHL 193
RC+ F + F++ + L
Sbjct: 516 RCIKTFEGHRDFVLSVAL 533
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
D V+++ SP + A S D VR W++ RG +A + H V + DG
Sbjct: 428 DGVTTVAISPDKQFVAAGSLDKSVRVWDM-RG--YLAERLEGPDGHKDSVYSVAFSPDGR 484
Query: 61 TVFSGGCDKQVKMWPLLS-----------GGQPV-TVAMHDAPIKEVAWIPEMNLLATGS 108
+ SG DK +KMW L + GG+ + T H + VA P+ + +GS
Sbjct: 485 NLVSGSLDKTIKMWELSAPRGIPSSAPPKGGRCIKTFEGHRDFVLSVALTPDSQWVLSGS 544
Query: 109 WDKTLKYWDTRQPNPVHTQ 127
D+ +++WD P HTQ
Sbjct: 545 KDRGVQFWD---PRTGHTQ 560
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 52/128 (40%), Gaps = 12/128 (9%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVP-------KASISHDHPVLCS 53
DSV S+ FSP LV+ S D ++ WE+S +S P K H VL
Sbjct: 472 DSVYSVAFSPDGRNLVSGSLDKTIKMWELSAPRGIPSSAPPKGGRCIKTFEGHRDFVLSV 531
Query: 54 TWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIP-----EMNLLATGS 108
D V SG D+ V+ W +G + + H + VA P + ATGS
Sbjct: 532 ALTPDSQWVLSGSKDRGVQFWDPRTGHTQLMLQGHKNSVISVAPSPVTGPNGVGYFATGS 591
Query: 109 WDKTLKYW 116
D + W
Sbjct: 592 GDMRARIW 599
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
S+SSL F P L + S D+ ++ W++ R G H V C + DG
Sbjct: 107 SISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYK-----GHTQAVRCLAFSPDGKW 161
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP 121
+ S D VK+W L++G H + + V + P LLA+GS D+T+K WD +
Sbjct: 162 LASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDLEKF 221
Query: 122 NPVHTQQ 128
N + + +
Sbjct: 222 NMIGSSE 228
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 19/145 (13%)
Query: 2 SVSSLCFSPKANILVATSWDN-QVRCWEISRGGTGVASVPKASIS---HDHPVLCSTWKD 57
+VSSL + L+AT ++ +V W +S+ P +S H V C +
Sbjct: 22 NVSSLVLGKSSGRLLATGGEDCRVNIWAVSK--------PNCIMSLTGHTSAVGCIQFNS 73
Query: 58 DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
V +G +++W L + T+ H A I + + P LA+GS D +K WD
Sbjct: 74 SEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWD 133
Query: 118 TRQPNPV-----HTQQLPDRCYALT 137
R+ V HTQ + RC A +
Sbjct: 134 VRRKGCVFRYKGHTQAV--RCLAFS 156
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 69/167 (41%), Gaps = 22/167 (13%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
+V + F+ +VA S +R W++ A + + + H + + G
Sbjct: 65 AVGCIQFNSSEERVVAGSLSGSLRLWDLE-----AAKILRTLMGHKASISSLDFHPMGEY 119
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD---- 117
+ SG D +K+W + G H ++ +A+ P+ LA+ S D T+K WD
Sbjct: 120 LASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAG 179
Query: 118 ------TRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQ 158
T + V+ Q Y L+ G+ADR + +++L+
Sbjct: 180 KMITEFTSHTSAVNVVQFHPNEY-------LLASGSADRTVKLWDLE 219
>sp|Q9UTC7|YIDC_SCHPO Uncharacterized WD repeat-containing protein C227.12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC227.12 PE=4 SV=1
Length = 462
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V + F P + LV+ S+D R W++ TGV + + H + + DG+ V
Sbjct: 268 VGRVAFHPSGDYLVSASFDTTWRLWDVH---TGVELLMQEG--HSEGIFSIACQPDGSLV 322
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
SGG D ++W L SG + + H I +AW P LAT S D T+K WD R+ +
Sbjct: 323 SSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVS 382
Query: 123 PVHT 126
HT
Sbjct: 383 LAHT 386
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 16/125 (12%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCW--------EISRGGTGVASVPKASISHDHPVLCST 54
++ + FS N + SW QV+ W ++ RG T S D LC
Sbjct: 175 IAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVS------GLDWYPLCQA 228
Query: 55 WKDDGT--TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKT 112
W D T+ +G D V +W + + H A + VA+ P + L + S+D T
Sbjct: 229 WDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTT 288
Query: 113 LKYWD 117
+ WD
Sbjct: 289 WRLWD 293
Score = 31.2 bits (69), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 9/97 (9%)
Query: 37 ASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVA 96
A + + I + P+ + ++G SG QVK+W + + H + +
Sbjct: 162 AELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLD 221
Query: 97 WIP---------EMNLLATGSWDKTLKYWDTRQPNPV 124
W P E LATG+ D T+ W Q P+
Sbjct: 222 WYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPL 258
>sp|Q4V7Y7|KTNB1_XENLA Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus laevis
GN=katnb1 PE=1 SV=1
Length = 655
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
+VSSL F P + + S D ++ W++ R G H V C + DG
Sbjct: 107 NVSSLDFHPYGEFVASGSLDTNIKLWDVRRKGCVFRYK-----GHTQAVRCLRFSPDGKW 161
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ 120
+ S D VK+W L +G ++ H P+ + + P LLA+GS D+T+++WD +
Sbjct: 162 LASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEK 220
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 13/162 (8%)
Query: 2 SVSSLCFSPKANILVATSWDN-QVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
SVSS+ + LVAT D+ +V W +++ ++ H PV + +
Sbjct: 22 SVSSVVLGRSSGRLVATGGDDCRVHLWSVNKPNCIMSLT-----GHTTPVESVRFNNSEE 76
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ 120
+ +G +++W L + T+ H A + + + P +A+GS D +K WD R+
Sbjct: 77 LIVAGSQSGSLRIWDLEAAKILRTLMGHKANVSSLDFHPYGEFVASGSLDTNIKLWDVRR 136
Query: 121 PNPV-----HTQQLPDRCYALTVRYPLMVVGTADRNLVVFNL 157
V HTQ + RC + + + D ++ +++L
Sbjct: 137 KGCVFRYKGHTQAV--RCLRFSPDGKWLASASDDHSVKLWDL 176
>sp|Q8K450|SPG16_MOUSE Sperm-associated antigen 16 protein OS=Mus musculus GN=Spag16 PE=1
SV=1
Length = 639
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
D +S CF P + L +S D+ ++ W++++G + H+H V TW G
Sbjct: 403 DWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLE-----GHNHAVWSCTWHSCGD 457
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTR 119
V S D K+W + S T+ H + + + P N+L T S DKTL WD R
Sbjct: 458 FVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDAR 516
Score = 32.3 bits (72), Expect = 2.1, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
DSV+S+ F P +NIL+ S D + W+ G ++ H H V +T+ G
Sbjct: 487 DSVNSIEFFPFSNILLTASADKTLSVWDARTG-----KCEQSLYGHMHSVNDATFTPRGH 541
Query: 61 TVFSGGCDKQ--VKMW 74
+ S CD + K+W
Sbjct: 542 IIAS--CDARGVTKLW 555
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
+ V+ + FSP L + S DN V+ W +S G K H V ++ DG
Sbjct: 1447 NEVNKVNFSPDGKTLASASRDNTVKLWNVSDG-----KFKKTLKGHTDEVFWVSFSPDGK 1501
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ 120
+ S DK +++W SG ++ H+ + V + P+ ++LA+ S DKT+K W +
Sbjct: 1502 IIASASADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHD 1561
Query: 121 PNPVHT 126
+ +HT
Sbjct: 1562 GHLLHT 1567
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
D V+SL FSP L + S D ++ W I+ G + K H+ V + DG
Sbjct: 1240 DWVNSLSFSPDGKTLASASADKTIKLWRIADG-----KLVKTLKGHNDSVWDVNFSSDGK 1294
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ 120
+ S D +K+W G + T H + V ++P+ N++A+ S D T++ W
Sbjct: 1295 AIASASRDNTIKLWNR-HGIELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPL 1353
Query: 121 PNPVHTQQLPDRCYALTVRYPLMVVGT--ADRNLVVFNLQN 159
+P+ YA++ + ++ T AD N+ +++ Q+
Sbjct: 1354 ISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQD 1394
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
D+V S+ FSP + + D ++ W+ S G ++ K H+ V + DG
Sbjct: 1114 DAVYSVSFSPDGQTIASGGSDKTIKLWQTSDG-----TLLKTITGHEQTVNNVYFSPDGK 1168
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYW 116
+ S D +K+W SG +T+ H A + V + P+ +A GS DKT+K W
Sbjct: 1169 NLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLW 1224
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 5/125 (4%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
++ + F+P+ +++ + + D V+ W + G K I HD+ V + DG T
Sbjct: 1406 AIYGISFTPQGDLIASANADKTVKIWRVRDG-----KALKTLIGHDNEVNKVNFSPDGKT 1460
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP 121
+ S D VK+W + G T+ H + V++ P+ ++A+ S DKT++ WD+
Sbjct: 1461 LASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSG 1520
Query: 122 NPVHT 126
N + +
Sbjct: 1521 NLIKS 1525
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 11/163 (6%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
D V S+ S + + S D ++ W SR G ++ H+ V ++ DG
Sbjct: 1073 DGVISISISRDGQTIASGSLDKTIKLW--SRDGRLFRTLN----GHEDAVYSVSFSPDGQ 1126
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ 120
T+ SGG DK +K+W G T+ H+ + V + P+ LA+ S D ++K WDT
Sbjct: 1127 TIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTS 1186
Query: 121 PNPVHTQQLPDRCYALTVRYP----LMVVGTADRNLVVFNLQN 159
+ T +TVR+ + G+ D+ + +++ Q+
Sbjct: 1187 GQLLMTLT-GHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQD 1228
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
D V + FSP I+ + S D +R W+ S G + S+P +H+ V + DG+
Sbjct: 1489 DEVFWVSFSPDGKIIASASADKTIRLWD-SFSGNLIKSLP----AHNDLVYSVNFNPDGS 1543
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYW 116
+ S DK VK+W G T + H + ++ P+ +A+ S DKT+K W
Sbjct: 1544 MLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIW 1599
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 5/115 (4%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
+V+++ FSP L + S D+ ++ W+ + G + H V+ + DG T
Sbjct: 1157 TVNNVYFSPDGKNLASASSDHSIKLWDTTSG-----QLLMTLTGHSAGVITVRFSPDGQT 1211
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYW 116
+ +G DK VK+W G T+ H + +++ P+ LA+ S DKT+K W
Sbjct: 1212 IAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLASASADKTIKLW 1266
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
D V S+ F+P ++L +TS D V+ W G + H + V S++ DG
Sbjct: 1531 DLVYSVNFNPDGSMLASTSADKTVKLWRSHDG-----HLLHTFSGHSNVVYSSSFSPDGR 1585
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYW--DT 118
+ S DK VK+W + G T+ H A + + P+ L +GS D T K W D+
Sbjct: 1586 YIASASEDKTVKIWQI-DGHLLTTLPQHQAGVMSAIFSPDGKTLISGSLDTTTKIWRFDS 1644
Query: 119 RQ 120
+Q
Sbjct: 1645 QQ 1646
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 23/132 (17%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCW--------EISRGGTGVASVPKASISHDHPVLCST 54
V ++ F P +NI+ + S DN +R W E+ G +GV +V +
Sbjct: 1325 VYAVNFLPDSNIIASASLDNTIRLWQRPLISPLEVLAGNSGVYAV--------------S 1370
Query: 55 WKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLK 114
+ DG+ + + G D +++W G T+ + A I +++ P+ +L+A+ + DKT+K
Sbjct: 1371 FLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKA-IYGISFTPQGDLIASANADKTVK 1429
Query: 115 YWDTRQPNPVHT 126
W R + T
Sbjct: 1430 IWRVRDGKALKT 1441
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V ++ FSP + A S D V+ W G + K H V ++ DG T+
Sbjct: 1200 VITVRFSPDGQTIAAGSEDKTVKLWHRQDG-----KLLKTLNGHQDWVNSLSFSPDGKTL 1254
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
S DK +K+W + G T+ H+ + +V + + +A+ S D T+K W+
Sbjct: 1255 ASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWN 1309
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 46 HDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLA 105
H V+ + DG T+ SG DK +K+W G T+ H+ + V++ P+ +A
Sbjct: 1071 HKDGVISISISRDGQTIASGSLDKTIKLWS-RDGRLFRTLNGHEDAVYSVSFSPDGQTIA 1129
Query: 106 TGSWDKTLKYWDT 118
+G DKT+K W T
Sbjct: 1130 SGGSDKTIKLWQT 1142
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
++ SL F P + + + S D ++ W++ R G SH V C + DG
Sbjct: 107 NICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYK-----SHTQAVRCLRFSPDGKW 161
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP 121
+ S D VK+W L +G H P+ V + P LLA+GS D+T+++WD +
Sbjct: 162 LASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKF 221
Query: 122 NPV---HTQQLPDRC 133
+ V + P RC
Sbjct: 222 HVVSCIEEEATPVRC 236
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 28/193 (14%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
+ SL S K ++VA S +R W++ A + + + H + + G+ V
Sbjct: 66 IESLQISAKEELIVAGSQSGSIRVWDLE-----AAKILRTLLGHKANICSLDFHPYGSFV 120
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD----- 117
SG D +K+W + G H ++ + + P+ LA+ + D T+K WD
Sbjct: 121 ASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 118 -----TRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLK 172
T PV+ + Y L+ G++DR + ++L+ +F ++ +
Sbjct: 181 VMFEFTGHSGPVNVVEFHPSEY-------LLASGSSDRTIRFWDLE----KFHVVSCIEE 229
Query: 173 YQT--RCVAAFPD 183
T RC+ PD
Sbjct: 230 EATPVRCILFNPD 242
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 56 KDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKY 115
K G + +GG D +V +W + +++ H PI+ + + L+ GS +++
Sbjct: 30 KSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRV 89
Query: 116 WD 117
WD
Sbjct: 90 WD 91
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V S+ FSP IL + S D VR W IS G H++ V + DGT +
Sbjct: 1371 VGSVIFSPDGAILASGSGDQTVRLWSISSG-----KCLYTLQGHNNWVGSIVFSPDGTLL 1425
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
SG D+ V++W + SG T+ H ++ VA+ + +LA+GS D+T+K WD +
Sbjct: 1426 ASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGE 1485
Query: 123 PVHT 126
+ T
Sbjct: 1486 CIKT 1489
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 8/162 (4%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V+S+ F+P ++L + S D VR WEIS + H V T+ DGT +
Sbjct: 1287 VNSVAFNPDGSMLASGSGDQTVRLWEISS-----SKCLHTFQGHTSWVSSVTFSPDGTML 1341
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
SG D+ V++W + SG T H + V + P+ +LA+GS D+T++ W
Sbjct: 1342 ASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGK 1401
Query: 123 PVHTQQLPDRCYALTVRYP---LMVVGTADRNLVVFNLQNPQ 161
++T Q + V P L+ G+ D+ + ++N+ + +
Sbjct: 1402 CLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGE 1443
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
VSS+ FSP +L + S D VR W IS G + H + V + DG +
Sbjct: 1329 VSSVTFSPDGTMLASGSDDQTVRLWSISSG-----ECLYTFLGHTNWVGSVIFSPDGAIL 1383
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
SG D+ V++W + SG T+ H+ + + + P+ LLA+GS D+T++ W+
Sbjct: 1384 ASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGE 1443
Query: 123 ---PVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 161
+H R A + ++ G+ D + +++++ +
Sbjct: 1444 CLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLWDVKTGE 1485
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V+++ FSP L + S D VR W+IS + H V + DG+T+
Sbjct: 1161 VNAVAFSPDGATLASGSGDQTVRLWDISS-----SKCLYILQGHTSWVNSVVFNPDGSTL 1215
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
SG D+ V++W + S T H + + V + P+ ++LA+GS DKT++ WD
Sbjct: 1216 ASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSK 1275
Query: 123 PVHTQQ 128
+HT Q
Sbjct: 1276 CLHTFQ 1281
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V+S+ F+P + L + S D VR WEI+ + H V + DG+ +
Sbjct: 1203 VNSVVFNPDGSTLASGSSDQTVRLWEINS-----SKCLCTFQGHTSWVNSVVFNPDGSML 1257
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
SG DK V++W + S T H + VA+ P+ ++LA+GS D+T++ W+
Sbjct: 1258 ASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSK 1317
Query: 123 PVHTQQ 128
+HT Q
Sbjct: 1318 CLHTFQ 1323
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V S+ FSP + +L + S D VR W+IS G H V + DG+ +
Sbjct: 951 VRSVVFSPNSLMLASGSSDQTVRLWDISSG-----ECLYIFQGHTGWVYSVAFNLDGSML 1005
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
+G D+ V++W + S H + ++ V + + +LA+GS D+T++ WD N
Sbjct: 1006 ATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGN 1065
Query: 123 PVHTQQLPDRCYALTVRYP--LMVVGTADRNLV 153
++T Q C V P M+ D +V
Sbjct: 1066 CLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIV 1098
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
SV ++ FSP + VR WE + G + H+ V + DG
Sbjct: 866 SVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCK-----GHNSWVNSVGFSQDGKM 920
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP 121
+ SG D+ V++W + SG T H + ++ V + P +LA+GS D+T++ WD
Sbjct: 921 LASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSG 980
Query: 122 NPVHTQQLPD---RCYALTVRYPLMVVGTADRNLVVFNLQNPQ 161
++ Q A + ++ G+ D+ + ++++ + Q
Sbjct: 981 ECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQ 1023
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V+S+ F+P ++L + S D VR W+IS + H + V + DG+ +
Sbjct: 1245 VNSVVFNPDGSMLASGSSDKTVRLWDISS-----SKCLHTFQGHTNWVNSVAFNPDGSML 1299
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
SG D+ V++W + S T H + + V + P+ +LA+GS D+T++ W
Sbjct: 1300 ASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGE 1359
Query: 123 PVHT 126
++T
Sbjct: 1360 CLYT 1363
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V S+ FS +L + S D VR W+IS G + H V + DG +
Sbjct: 1035 VRSVVFSSDGAMLASGSDDQTVRLWDISSG-----NCLYTLQGHTSCVRSVVFSPDGAML 1089
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
SGG D+ V++W + SG T+ + + ++ + + P LA GS D+ ++ WD
Sbjct: 1090 ASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKK 1149
Query: 123 PVHTQQ 128
++T Q
Sbjct: 1150 CLYTLQ 1155
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V L FSP L S D VR W+IS H + V + DG T+
Sbjct: 1119 VRFLVFSPNGVTLANGSSDQIVRLWDISS-----KKCLYTLQGHTNWVNAVAFSPDGATL 1173
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
SG D+ V++W + S + H + + V + P+ + LA+GS D+T++ W+
Sbjct: 1174 ASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWE 1228
>sp|C4YFX2|TUP1_CANAW Transcriptional repressor TUP1 OS=Candida albicans (strain WO-1)
GN=TUP1 PE=4 SV=1
Length = 511
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
+ S+CFSP +L + D +R W++S + K H+ + + DG +
Sbjct: 257 IRSVCFSPDGKLLATGAEDKLIRIWDLS-----TKRIIKILRGHEQDIYSLDFFPDGDRL 311
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 118
SG D+ V++W L + +T+++ D + VA P+ L+A GS D+T++ WD+
Sbjct: 312 VSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLIAAGSLDRTVRVWDS 366
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 8/154 (5%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGG--TGVASVPKASISHDHPVLCSTWKDD 58
D V+++ SP ++ A S D VR W+ + G + S + H+ V + ++
Sbjct: 338 DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNN 397
Query: 59 GTTVFSGGCDKQVKMWPLLSGGQ-----PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTL 113
G + SG D+ VK+W L VT H + V P+ + +GS D+ +
Sbjct: 398 GEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGV 457
Query: 114 KYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGT 147
+WD NP+ Q R ++V L GT
Sbjct: 458 IFWDQASGNPLLMLQ-GHRNSVISVAVSLNSKGT 490
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 28/141 (19%)
Query: 43 SISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSG--------------GQPVTVAMH 88
S+ H V C + DG + + GC+K +++ + +G T A
Sbjct: 195 SLDHSSVVCCVRFSRDGKFI-ATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASG 253
Query: 89 DAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV-----HTQQLPDRCYALTVRYP-- 141
D I+ V + P+ LLATG+ DK ++ WD + H Q + Y+L +P
Sbjct: 254 DLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDI----YSLDF-FPDG 308
Query: 142 -LMVVGTADRNLVVFNLQNPQ 161
+V G+ DR++ +++L+ Q
Sbjct: 309 DRLVSGSGDRSVRIWDLRTSQ 329
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
DSV S+ FS + + S D V+ W + ++ I H VL D
Sbjct: 387 DSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNE 446
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMN----LLATGSWDKTLKYW 116
+ SG D+ V W SG + + H + VA + ATGS D + W
Sbjct: 447 YILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIW 506
>sp|P0CY34|TUP1_CANAL Transcriptional repressor TUP1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=TUP1 PE=1 SV=1
Length = 512
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
+ S+CFSP +L + D +R W++S + K H+ + + DG +
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLS-----TKRIIKILRGHEQDIYSLDFFPDGDRL 312
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 118
SG D+ V++W L + +T+++ D + VA P+ L+A GS D+T++ WD+
Sbjct: 313 VSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSPDGKLIAAGSLDRTVRVWDS 367
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 8/154 (5%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGG--TGVASVPKASISHDHPVLCSTWKDD 58
D V+++ SP ++ A S D VR W+ + G + S + H+ V + ++
Sbjct: 339 DGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNN 398
Query: 59 GTTVFSGGCDKQVKMWPLLSGGQ-----PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTL 113
G + SG D+ VK+W L VT H + V P+ + +GS D+ +
Sbjct: 399 GEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGV 458
Query: 114 KYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGT 147
+WD NP+ Q R ++V L GT
Sbjct: 459 IFWDQASGNPLLMLQ-GHRNSVISVAVSLNSKGT 491
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 28/141 (19%)
Query: 43 SISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSG--------------GQPVTVAMH 88
S+ H V C + DG + + GC+K +++ + +G T A
Sbjct: 196 SLDHSSVVCCVRFSRDGKFI-ATGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTASG 254
Query: 89 DAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV-----HTQQLPDRCYALTVRYP-- 141
D I+ V + P+ LLATG+ DK ++ WD + H Q + Y+L +P
Sbjct: 255 DLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDI----YSLDF-FPDG 309
Query: 142 -LMVVGTADRNLVVFNLQNPQ 161
+V G+ DR++ +++L+ Q
Sbjct: 310 DRLVSGSGDRSVRIWDLRTSQ 330
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
DSV S+ FS + + S D V+ W + ++ I H VL D
Sbjct: 388 DSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNE 447
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMN----LLATGSWDKTLKYW 116
+ SG D+ V W SG + + H + VA + ATGS D + W
Sbjct: 448 YILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIW 507
>sp|Q6NVM2|KTNB1_XENTR Katanin p80 WD40 repeat-containing subunit B1 OS=Xenopus tropicalis
GN=katnb1 PE=2 SV=1
Length = 655
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
+V SL F P + + + S D ++ W++ R G H V C + DG
Sbjct: 107 NVCSLDFHPYGDFVASGSLDTNIKLWDVRRKGCVFRYK-----GHTQAVRCLRFSPDGKW 161
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ 120
+ S D VK+W L +G ++ H P+ + + P LLA+GS D+T+++WD +
Sbjct: 162 LASASDDHSVKLWDLTAGKMMAELSEHKGPVNIIEFHPNEYLLASGSADRTVRFWDLEK 220
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 2 SVSSLCFSPKANILVATSWDN-QVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
SVSS+ + LVAT D+ +V W +++ ++ H PV + +
Sbjct: 22 SVSSVVLGKSSGRLVATGGDDCRVNLWSVNKPNCIMSLT-----GHTTPVESVRFNNAEE 76
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ 120
+ +G +++W L + T+ H A + + + P + +A+GS D +K WD R+
Sbjct: 77 LIVAGSQSGSLRVWDLEAAKILRTLMGHKANVCSLDFHPYGDFVASGSLDTNIKLWDVRR 136
Query: 121 PNPV-----HTQQLPDRCYALTVRYPLMVVGTADRNLVVFNL 157
V HTQ + RC + + + D ++ +++L
Sbjct: 137 KGCVFRYKGHTQAV--RCLRFSPDGKWLASASDDHSVKLWDL 176
>sp|Q91WQ5|TAF5L_MOUSE TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2
SV=1
Length = 589
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 8 FSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGC 67
F P +N L S D VR W +G + + H PVL ++ +G + S G
Sbjct: 434 FHPNSNYLATGSTDKTVRLWSAQQGNS-----VRLFTGHRGPVLSLSFSPNGKYLASAGE 488
Query: 68 DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTR 119
D+++K+W L SG + H I +A+ P+ L+A+ S D +++ WD R
Sbjct: 489 DQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIR 540
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDD---- 58
V S F ++ L++ S D +R W++ G+ +V H +PV W D
Sbjct: 345 VYSTRFLADSSGLLSCSEDMSIRYWDL---GSFTNTVLYQG--HAYPV----WDVDISPF 395
Query: 59 GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 118
SG D+ ++W A H A + V + P N LATGS DKT++ W
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 119 RQPNPV 124
+Q N V
Sbjct: 456 QQGNSV 461
Score = 37.4 bits (85), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEI 29
DS++SL FSP + ++ + S DN VR W+I
Sbjct: 511 DSITSLAFSPDSGLIASASMDNSVRVWDI 539
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Query: 46 HDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLA 105
H PV + + D + + S D ++ W L S V H P+ +V P A
Sbjct: 341 HCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFA 400
Query: 106 TGSWDKTLKYW--DTRQPNPVHTQQLPD-RCYALTVRYPLMVVGTADRNLVVFNLQ 158
+GS D+T + W D P ++ L D C + G+ D+ + +++ Q
Sbjct: 401 SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 456
>sp|Q54S79|WDR3_DICDI WD repeat-containing protein 3 homolog OS=Dictyostelium discoideum
GN=wdr3 PE=3 SV=1
Length = 942
Score = 63.5 bits (153), Expect = 8e-10, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 12/164 (7%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V +L +S L + DN V+ + T + H PV+C DD T +
Sbjct: 534 VLALKYSADNKFLAVSLLDNTVKIFY-----TDTVKFHLSLYGHKLPVMCLDISDDSTLI 588
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
+G DK +K+W L G + HD I +V++IP + + S DK +KYWD +
Sbjct: 589 ITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISASKDKRIKYWDADKFE 648
Query: 123 PVHT-QQLPDRCYALTVRY--PLMVVGTADRNLVVFNLQNPQTE 163
+ T + ++L + + G+ DR++ +FN QTE
Sbjct: 649 HIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFN----QTE 688
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 5/124 (4%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V+++C S +L + D +R W +S + H V T+ G +
Sbjct: 62 VTNVCLSKDGALLASGYSDGSIRIWSMSD-----YQLQAVFNGHRGSVTTMTFNRLGNIL 116
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
SG D +V +W +++ + H I V + N L T S D +K WDT +
Sbjct: 117 VSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQH 176
Query: 123 PVHT 126
+ T
Sbjct: 177 CIQT 180
Score = 38.1 bits (87), Expect = 0.037, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
+ SL S +LV+TS ++ V+ W + ++ + SI+ D+ LC+ + V
Sbjct: 399 IRSLSLSSNDQMLVSTSSES-VKVWNMK----SLSCI--RSIACDYG-LCTVFAPGNLHV 450
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
G ++++ L S + ++ H+ + + P++ + +G DK +K+WD
Sbjct: 451 IVGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWD 505
Score = 33.1 bits (74), Expect = 1.3, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 22/135 (16%)
Query: 42 ASI-SHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPL---------------LSGGQPVTV 85
ASI +H+ V D V SGG DK VK W LS + + V
Sbjct: 471 ASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWDFELIASQENSKHKVLNLSLTKTLKV 530
Query: 86 AMHDAPIKEVAWIPEMNLLATGSWDKTLK--YWDTRQPN-PVHTQQLPDRCYALTVRYPL 142
++ + + + + LA D T+K Y DT + + ++ +LP C ++ L
Sbjct: 531 ---ESDVLALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLPVMCLDISDDSTL 587
Query: 143 MVVGTADRNLVVFNL 157
++ G+AD+N+ ++ L
Sbjct: 588 IITGSADKNIKIWGL 602
Score = 31.2 bits (69), Expect = 4.5, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 5/115 (4%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
SV+++ F+ NILV+ S D +V W+I +G+ + H + +
Sbjct: 103 SVTTMTFNRLGNILVSGSKDTEVIVWDIIT-ESGLFRLR----GHRDQITSVKLLERSNH 157
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYW 116
+ + D +K+W + T+ H PI + P+ L + + D +++W
Sbjct: 158 LITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFW 212
>sp|Q8BHD1|POC1B_MOUSE POC1 centriolar protein homolog B OS=Mus musculus GN=Poc1b PE=1
SV=1
Length = 476
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
D V+SL FSP+ N+L + S D VR W + R G +S KA H PV + DG
Sbjct: 61 DVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGK--SSEFKA---HTAPVRSVDFSADGQ 115
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 118
+ + DK +K+W + ++ H ++ + P+ L+ + S DKT+K WDT
Sbjct: 116 LLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 74/191 (38%), Gaps = 27/191 (14%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
+++S FSP + SWD + W + V H V + G
Sbjct: 20 AITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-----GHKDVVTSLQFSPQGNL 74
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP 121
+ S D+ V++W L G+ H AP++ V + + LL T S DK++K W +
Sbjct: 75 LASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQ 134
Query: 122 NPV-----HTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTR 176
+ HT + RC + L+V + D+ + +++ N Q
Sbjct: 135 RFLYSLYRHTHWV--RCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ--------------- 177
Query: 177 CVAAFPDQQGF 187
CV F D GF
Sbjct: 178 CVNNFSDSVGF 188
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
Query: 8 FSPKANILVATSWDNQVRCWEISRG---GTGVASVPKASISHDHPVLCSTWKDDGTTVFS 64
FSP ++V+ S D ++ W+ + SV A+ +P +GT + S
Sbjct: 152 FSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNP--------NGTCIAS 203
Query: 65 GGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV 124
G D VK+W + +H + +++ P N L T S D T+K D + +
Sbjct: 204 AGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLI 263
Query: 125 HTQQ---LPDRCYALTVRYPLMVVGTAD-------RNLVVFNLQNPQTEFKRIN 168
+T Q P + + L+ G AD N + + ++P+ KR++
Sbjct: 264 YTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWRTNFIHLHCKDPKRNLKRLH 317
Score = 37.0 bits (84), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V+ L F P N LV S D V+ ++ G + H PV ++ DG +
Sbjct: 231 VNCLSFHPLGNSLVTASSDGTVKMLDLIEG-----RLIYTLQGHTGPVFTVSFSKDGELL 285
Query: 63 FSGGCDKQVKMW 74
SGG D QV +W
Sbjct: 286 TSGGADAQVLIW 297
Score = 33.5 bits (75), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 23/162 (14%)
Query: 47 DHPVLCSTWKDDGTTV----FSGGC--------DKQVKMWPLLSGGQPVTVAMHDAPIKE 94
+ P+L ++K + FS C D + +W L + H +
Sbjct: 6 EDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTS 65
Query: 95 VAWIPEMNLLATGSWDKTLKYW--DTR-QPNPVHTQQLPDRCYALTVRYPLMVVGTADRN 151
+ + P+ NLLA+ S D+T++ W D + + + P R + L+V + D++
Sbjct: 66 LQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKS 125
Query: 152 LVVFNLQNPQTEFKRINSPLKYQT---RCVAAFPDQQGFLVC 190
+ V+++ +R L T RC PD + + C
Sbjct: 126 IKVWSMFR-----QRFLYSLYRHTHWVRCAKFSPDGRLIVSC 162
>sp|P20053|PRP4_YEAST U4/U6 small nuclear ribonucleoprotein PRP4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=PRP4 PE=1
SV=1
Length = 465
Score = 63.5 bits (153), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 12/142 (8%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASI---SHDHPVLCSTWKDDG 59
+S + + P + + S D R W+ AS + + HD V +++ DG
Sbjct: 268 ISDVKYHPSGKFIGSASHDMTWRLWD--------ASTHQELLLQEGHDKGVFSLSFQCDG 319
Query: 60 TTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTR 119
+ V SGG D +W + SG + +T+A H PI VAW P +ATG D + WD R
Sbjct: 320 SLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIR 379
Query: 120 QPNPVHTQQ-LPDRCYALTVRY 140
+ + Q L R VR+
Sbjct: 380 KRDEGQLNQILAHRNIVTQVRF 401
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V S+ FSP + + S D+ ++ W+ + G + + H VL + DG V
Sbjct: 928 VQSVAFSPDGQRVASGSDDHTIKIWDAASG-----TCTQTLEGHGSSVLSVAFSPDGQRV 982
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 118
SG DK +K+W SG T+ H + VA+ P+ +A+GS DKT+K WDT
Sbjct: 983 ASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDT 1038
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V S+ FSP + + S D ++ W+ + G + + H V + DG V
Sbjct: 1138 VHSVAFSPDGQRVASGSIDGTIKIWDAASG-----TCTQTLEGHGGWVQSVAFSPDGQRV 1192
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
SG DK +K+W SG T+ H ++ VA+ P+ +A+GS D T+K WDT
Sbjct: 1193 ASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTASGT 1252
Query: 123 PVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTE-FKRINSPLKY 173
T + L+ Y + T N+ + E +++SP+ Y
Sbjct: 1253 CTQTLNVGSTATCLSFDYTNAYINT---NIGRIQIATATMESLNQLSSPVCY 1301
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
DSV S+ FSP + + S D ++ W+ + G + + H V + DG
Sbjct: 1094 DSVWSVAFSPDGQRVASGSIDGTIKIWDAASG-----TCTQTLEGHGGWVHSVAFSPDGQ 1148
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 118
V SG D +K+W SG T+ H ++ VA+ P+ +A+GS DKT+K WDT
Sbjct: 1149 RVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDT 1206
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
SV S+ FSP + + S D ++ W+ + G + + H V + DG
Sbjct: 885 SVWSVAFSPDRERVASGSDDKTIKIWDAASG-----TCTQTLEGHGGRVQSVAFSPDGQR 939
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 118
V SG D +K+W SG T+ H + + VA+ P+ +A+GS DKT+K WDT
Sbjct: 940 VASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDT 996
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
SV S+ FSP + + S D ++ W+ + G + + H V + DG
Sbjct: 969 SVLSVAFSPDGQRVASGSGDKTIKIWDTASG-----TCTQTLEGHGGSVWSVAFSPDGQR 1023
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
V SG DK +K+W SG T+ H ++ V + P+ +A+GS D T+K WD
Sbjct: 1024 VASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWD 1079
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 5/116 (4%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
SV S+ FS + + S D ++ W+ + GTG ++ H V + D
Sbjct: 843 SVLSVAFSADGQRVASGSDDKTIKIWDTA-SGTGTQTLE----GHGGSVWSVAFSPDRER 897
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
V SG DK +K+W SG T+ H ++ VA+ P+ +A+GS D T+K WD
Sbjct: 898 VASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWD 953
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V S+ FSP + + S D+ ++ W+ G + + H V + DG V
Sbjct: 1054 VQSVVFSPDGQRVASGSDDHTIKIWDAVSG-----TCTQTLEGHGDSVWSVAFSPDGQRV 1108
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
SG D +K+W SG T+ H + VA+ P+ +A+GS D T+K WD
Sbjct: 1109 ASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWD 1163
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 46 HDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLA 105
H VL + DG V SG DK +K+W SG T+ H + VA+ P+ +A
Sbjct: 840 HGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVA 899
Query: 106 TGSWDKTLKYWD 117
+GS DKT+K WD
Sbjct: 900 SGSDDKTIKIWD 911
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 84 TVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ 128
T+ H + + VA+ + +A+GS DKT+K WDT T +
Sbjct: 836 TLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLE 880
>sp|Q8BG40|KTNB1_MOUSE Katanin p80 WD40 repeat-containing subunit B1 OS=Mus musculus
GN=Katnb1 PE=1 SV=1
Length = 658
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 16/143 (11%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
++ SL F P + + S D ++ W+I R G H V C + DG
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR-----GHSQAVRCLRFSPDGKW 161
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTR-- 119
+ S D VK+W L +G H P+ V + P LLA+GS D+T+++WD
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF 221
Query: 120 --------QPNPVHTQQL-PDRC 133
+P PV + PD C
Sbjct: 222 QVVSCIEGEPGPVRSVLFNPDGC 244
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V S+ + ++VA S +R W++ A + + + H + + G V
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLE-----AAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
SG D +K+W + G H ++ + + P+ LA+ + D T+K WD
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 123 -----PVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 161
P HT P L+ G++DR + ++L+ Q
Sbjct: 181 MMSEFPGHTG--PVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQ 222
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 6/120 (5%)
Query: 2 SVSSLCFSPKANILVATSWDN-QVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
+VSSL + L+AT D+ +V W I++ ++ H PV
Sbjct: 22 NVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-----GHTSPVESVRLNTPEE 76
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ 120
+ +G +++W L + T+ H A I + + P +A+GS D +K WD R+
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
>sp|Q9BVA0|KTNB1_HUMAN Katanin p80 WD40 repeat-containing subunit B1 OS=Homo sapiens
GN=KATNB1 PE=1 SV=1
Length = 655
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 16/143 (11%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
++ SL F P + + S D ++ W+I R G H V C + DG
Sbjct: 107 NICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYR-----GHSQAVRCLRFSPDGKW 161
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTR-- 119
+ S D VK+W L +G H P+ V + P LLA+GS D+T+++WD
Sbjct: 162 LASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF 221
Query: 120 --------QPNPVHTQQL-PDRC 133
+P PV + PD C
Sbjct: 222 QVVSCIEGEPGPVRSVLFNPDGC 244
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V S+ + ++VA S +R W++ A + + + H + + G V
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLE-----AAKILRTLMGHKANICSLDFHPYGEFV 120
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
SG D +K+W + G H ++ + + P+ LA+ + D T+K WD
Sbjct: 121 ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK 180
Query: 123 -----PVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 161
P HT P L+ G++DR + ++L+ Q
Sbjct: 181 MMSEFPGHTG--PVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQ 222
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 6/120 (5%)
Query: 2 SVSSLCFSPKANILVATSWDN-QVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
+VSSL + L+AT D+ +V W I++ ++ H PV
Sbjct: 22 NVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT-----GHTSPVESVRLNTPEE 76
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ 120
+ +G +++W L + T+ H A I + + P +A+GS D +K WD R+
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRR 136
>sp|D3ZW91|POC1B_RAT POC1 centriolar protein homolog B OS=Rattus norvegicus GN=Poc1b
PE=2 SV=1
Length = 477
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 5/118 (4%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
D V+SL FSP+ N+L + S D VR W + R G +S KA H PV + DG
Sbjct: 61 DVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGK--SSEFKA---HTAPVRSVDFSADGQ 115
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 118
+ + DK +K+W + ++ H ++ + P+ L+ + S DKT+K WDT
Sbjct: 116 FLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 73/191 (38%), Gaps = 27/191 (14%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
+++S FSP + SWD + W + V H V + G
Sbjct: 20 AITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-----GHKDVVTSLQFSPQGNL 74
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP 121
+ S DK V++W L G+ H AP++ V + + L T S DK++K W +
Sbjct: 75 LASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQ 134
Query: 122 NPV-----HTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTR 176
+ HT + RC + L+V + D+ + +++ + Q
Sbjct: 135 RFLYSLYRHTHWV--RCAKFSPDGRLIVSCSEDKTIKIWDTTSKQ--------------- 177
Query: 177 CVAAFPDQQGF 187
CV F D GF
Sbjct: 178 CVNNFSDSVGF 188
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 8 FSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGC 67
FSP + + D+ VR W+I + + + H V C ++ G ++ +
Sbjct: 194 FSPNGTCIASAGSDHAVRIWDIR-----MNRLLQHYQVHSCGVNCLSFHPSGNSLVTASS 248
Query: 68 DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVH 125
D VK+ L+ G T+ H P+ V++ + L +G D + W T N VH
Sbjct: 249 DGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRT-SFNQVH 305
Score = 37.0 bits (84), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V+ L F P N LV S D V+ ++ G + H PV ++ DG
Sbjct: 231 VNCLSFHPSGNSLVTASSDGTVKILDLVEG-----RLIYTLQGHTGPVFTVSFSKDGELF 285
Query: 63 FSGGCDKQVKMW 74
SGG D QV +W
Sbjct: 286 TSGGADAQVLVW 297
Score = 33.5 bits (75), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 11/129 (8%)
Query: 68 DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYW--DTR-QPNPV 124
D + +W L + H + + + P+ NLLA+ S DKT++ W D + + +
Sbjct: 39 DTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEF 98
Query: 125 HTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQT---RCVAAF 181
P R + +V + D+++ V+++ +R L T RC
Sbjct: 99 KAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYR-----QRFLYSLYRHTHWVRCAKFS 153
Query: 182 PDQQGFLVC 190
PD + + C
Sbjct: 154 PDGRLIVSC 162
>sp|Q6DH44|WDR83_DANRE WD repeat domain-containing protein 83 OS=Danio rerio GN=wdr83 PE=2
SV=1
Length = 315
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
+V ++ F+ N L+ D ++ W +SRG ++ K H + VL + D +
Sbjct: 27 AVRAVRFNADGNYLLTCGSDKSLKLWSVSRG-----TLLKTYSGHGYEVLDADGSYDNSQ 81
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT--R 119
+ S DK V +W + SG + H + V + E ++ +GS D T++ WDT R
Sbjct: 82 LCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSR 141
Query: 120 QPNPVHT-QQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCV 178
+ P+ + D +L V ++ G+ D + ++L+ Q + I SP+ CV
Sbjct: 142 RMEPIQILDESQDGISSLKVSEHELLTGSVDGRVRRYDLRMGQLQVDYIGSPIT----CV 197
Query: 179 AAFPDQQ 185
D Q
Sbjct: 198 CFSRDGQ 204
>sp|A8X8C6|TG125_CAEBR WD repeat-containing protein tag-125 OS=Caenorhabditis briggsae
GN=tag-125 PE=4 SV=1
Length = 368
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 19/181 (10%)
Query: 8 FSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGC 67
F+P+++++V+ S+D VR W++ R G V ++P +H PV ++ DG+ + SG
Sbjct: 171 FNPQSSLVVSGSFDESVRIWDV-RTGMCVKTLP----AHSDPVSAVSFNRDGSLITSGSY 225
Query: 68 DKQVKMWPLLSGGQPVTVAMHDA--PIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV- 124
D V++W + GQ V + D P+ V + P + + + D TLK WD + +
Sbjct: 226 DGLVRIWDT-ANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLK 284
Query: 125 HTQQLPDRCYALTVRYPL-----MVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVA 179
Q + Y + + + ++ G+ D + V+NLQ K + L+ T+ V
Sbjct: 285 QYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQT-----KEVVQSLEGHTQAVI 339
Query: 180 A 180
A
Sbjct: 340 A 340
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V+ +S + +V S D ++ +E+ + K H + V C + + V
Sbjct: 124 VNDFAWSADSKSIVTASDDKTLKIYEVP-----TVKMAKTLKGHTNYVFCCNFNPQSSLV 178
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
SG D+ V++W + +G T+ H P+ V++ + +L+ +GS+D ++ WDT
Sbjct: 179 VSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQ 238
Query: 123 PVHT 126
V T
Sbjct: 239 CVKT 242
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLC---STWKDDG 59
V+ + FSP +++++ DN ++ W+ +G T K H++ C + G
Sbjct: 251 VAFVKFSPNGKYILSSNLDNTLKLWDFGKGKT-----LKQYQGHENNKYCIFANFSVTGG 305
Query: 60 TTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSW--DKTLKYW 116
+ SG D ++ +W L + ++ H + P N++A+G+ D T++ W
Sbjct: 306 KWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
D VS++ F+ +++ + S+D VR W+ + G V + PV + +G
Sbjct: 206 DPVSAVSFNRDGSLITSGSYDGLVRIWDTANG----QCVKTLVDDENPPVAFVKFSPNGK 261
Query: 61 TVFSGGCDKQVKMWPLLSG 79
+ S D +K+W G
Sbjct: 262 YILSSNLDNTLKLWDFGKG 280
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 59 GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
G + + DK VK+W + T+ H + + AW + + T S DKTLK ++
Sbjct: 91 GKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYE 149
>sp|O75529|TAF5L_HUMAN TAF5-like RNA polymerase II p300/CBP-associated factor-associated
factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1
SV=1
Length = 589
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 8 FSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGC 67
F P +N L S D VR W +G + + H PVL + +G + S G
Sbjct: 434 FHPNSNYLATGSTDKTVRLWSAQQGNS-----VRLFTGHRGPVLSLAFSPNGKYLASAGE 488
Query: 68 DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTR 119
D+++K+W L SG + H I + + P+ L+A+ S D +++ WD R
Sbjct: 489 DQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIR 540
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDD---- 58
V S F ++ L++ S D +R W++ G+ +V H +PV W D
Sbjct: 345 VYSTRFLADSSGLLSCSEDMSIRYWDL---GSFTNTVLYQG--HAYPV----WDLDISPY 395
Query: 59 GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 118
SG D+ ++W A H A + V + P N LATGS DKT++ W
Sbjct: 396 SLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSA 455
Query: 119 RQPNPV 124
+Q N V
Sbjct: 456 QQGNSV 461
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEI 29
D+++SL FSP + ++ + S DN VR W+I
Sbjct: 511 DNITSLTFSPDSGLIASASMDNSVRVWDI 539
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Query: 46 HDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLA 105
H PV + + D + + S D ++ W L S V H P+ ++ P A
Sbjct: 341 HCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFA 400
Query: 106 TGSWDKTLKYW--DTRQPNPVHTQQLPD-RCYALTVRYPLMVVGTADRNLVVFNLQ 158
+GS D+T + W D P ++ L D C + G+ D+ + +++ Q
Sbjct: 401 SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 456
>sp|Q9UUG8|TUP12_SCHPO Transcriptional repressor tup12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup12 PE=1 SV=2
Length = 598
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 8/158 (5%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V S+ FSP L D Q+R W+I++ V + H+ + + DG T+
Sbjct: 349 VRSVAFSPDGKYLATGVEDQQIRIWDIAQ-----KRVYRLLTGHEQEIYSLDFSKDGKTL 403
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP- 121
SG D+ V +W + +G Q + + D + V + P+ +A GS DK ++ W +
Sbjct: 404 VSGSGDRTVCLWDVEAGEQKLILHTDDG-VTTVMFSPDGQFIAAGSLDKVIRIWTSSGTL 462
Query: 122 -NPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQ 158
+H + A + +V G+ D + ++ LQ
Sbjct: 463 VEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQ 500
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKAS-------ISHDHPVLCS 53
+SV S+ FSP LV+ S DN ++ WE+ S+ K H +L
Sbjct: 471 ESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSV 530
Query: 54 TWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTL 113
T DG + SG D+ ++ W S +T+ H+ + VA P + ATGS D
Sbjct: 531 TVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRA 590
Query: 114 KYW 116
+ W
Sbjct: 591 RIW 593
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 21/139 (15%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
D V+++ FSP + A S D +R W S GT V + H+ V + DG
Sbjct: 430 DGVTTVMFSPDGQFIAAGSLDKVIRIWTSS--GTLVEQLH----GHEESVYSVAFSPDGK 483
Query: 61 TVFSGGCDKQVKMWPL--LSGGQPV----------TVAMHDAPIKEVAWIPEMNLLATGS 108
+ SG D +K+W L +S P T H I V P+ + +GS
Sbjct: 484 YLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGS 543
Query: 109 WDKTLKYWDTRQPNPVHTQ 127
D+T+++W P+ H+Q
Sbjct: 544 KDRTIQFW---SPDSPHSQ 559
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 7/118 (5%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASIS-HDHPVLCSTWKDDG 59
D V ++ FSP +L + S D VR W+++ A+ +A H H VL + DG
Sbjct: 502 DWVRAVAFSPDGALLASGSDDATVRLWDVA------AAEERAVFEGHTHYVLDIAFSPDG 555
Query: 60 TTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
+ V SG D ++W + +G + + H + VA+ P+ +++A+GS D T++ WD
Sbjct: 556 SMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWD 613
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
++V SL FSP ++LV S D+ V W+++ G H V + DG
Sbjct: 628 ENVVSLAFSPDGSMLVHGS-DSTVHLWDVASG-----EALHTFEGHTDWVRAVAFSPDGA 681
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYW 116
+ SG D+ +++W + + + T+ H P+ VA+ PE LA+ S D T++ W
Sbjct: 682 LLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIW 737
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 60/118 (50%), Gaps = 8/118 (6%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGT-GVASVPKASISHDHPVLCSTWKDDG 59
D V ++ FSP +++ + S D +R W+++ G V P + V+ + DG
Sbjct: 586 DYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAEN------VVSLAFSPDG 639
Query: 60 TTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
+ + G D V +W + SG T H ++ VA+ P+ LLA+GS D+T++ WD
Sbjct: 640 SMLVHG-SDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWD 696
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 11/174 (6%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V + FSP +++ + S D R W ++ G +V K H V + DG+ V
Sbjct: 546 VLDIAFSPDGSMVASGSRDGTARLWNVATGTE--HAVLKG---HTDYVYAVAFSPDGSMV 600
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN 122
SG D +++W + +G + + + +A+ P+ ++L GS D T+ WD
Sbjct: 601 ASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGS-DSTVHLWDVASGE 659
Query: 123 PVHTQQLPD---RCYALTVRYPLMVVGTADRNLVVFNL--QNPQTEFKRINSPL 171
+HT + R A + L+ G+ DR + ++++ Q T + P+
Sbjct: 660 ALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPV 713
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 5 SLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFS 64
++ FSP ++L S D + W+++ G H V + DG + S
Sbjct: 464 AVAFSPGGSLLAGGSGDKLIHVWDVASGDE-----LHTLEGHTDWVRAVAFSPDGALLAS 518
Query: 65 GGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
G D V++W + + + H + ++A+ P+ +++A+GS D T + W+
Sbjct: 519 GSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLWN 571
Score = 38.5 bits (88), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASIS-HDHPVLCSTWKDDG 59
D V ++ FSP +L + S D +R W+++ A ++ H PV + +G
Sbjct: 669 DWVRAVAFSPDGALLASGSDDRTIRLWDVA------AQEEHTTLEGHTEPVHSVAFHPEG 722
Query: 60 TTVFSGGCDKQVKMWPL 76
TT+ S D +++WP+
Sbjct: 723 TTLASASEDGTIRIWPI 739
>sp|P25387|GBLP_CHLRE Guanine nucleotide-binding protein subunit beta-like protein
OS=Chlamydomonas reinhardtii GN=GBLP PE=2 SV=1
Length = 318
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 8 FSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGC 67
P +N L++ S D V WE+ R + KA H H V DG +G
Sbjct: 25 LDPSSNTLLSASRDKSVLVWELERSESNYGYARKALRGHSHFVQDVVISSDGQFCLTGSW 84
Query: 68 DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT--------R 119
D +++W L +G H + VA+ + + +GS DKT+K W+T
Sbjct: 85 DGTLRLWDLNTGTTTRRFVGHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLGECKYTIG 144
Query: 120 QPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQN 159
+P HT+ + ++ P++V G D+ + V+NL N
Sbjct: 145 EPEG-HTEWVSCVRFSPMTTNPIIVSGGWDKMVKVWNLTN 183
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 15/122 (12%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
V + S + SWD +R W+++ G T + + H VL + D +
Sbjct: 67 VQDVVISSDGQFCLTGSWDGTLRLWDLNTGTT-----TRRFVGHTKDVLSVAFSVDNRQI 121
Query: 63 FSGGCDKQVKMWPLLSG-----GQPVTVAMHDAPIKEVAWIPEMN--LLATGSWDKTLKY 115
SG DK +K+W L G+P H + V + P ++ +G WDK +K
Sbjct: 122 VSGSRDKTIKLWNTLGECKYTIGEP---EGHTEWVSCVRFSPMTTNPIIVSGGWDKMVKV 178
Query: 116 WD 117
W+
Sbjct: 179 WN 180
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 5/136 (3%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT- 61
V S+ FS +V+ S D ++ W P+ H V C + T
Sbjct: 109 VLSVAFSVDNRQIVSGSRDKTIKLWNTLGECKYTIGEPEG---HTEWVSCVRFSPMTTNP 165
Query: 62 -VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ 120
+ SGG DK VK+W L + + H + V P+ +L A+G D WD +
Sbjct: 166 IIVSGGWDKMVKVWNLTNCKLKNNLVGHHGYVNTVTVSPDGSLCASGGKDGIAMLWDLAE 225
Query: 121 PNPVHTQQLPDRCYAL 136
+++ D + L
Sbjct: 226 GKRLYSLDAGDVIHCL 241
Score = 33.5 bits (75), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDH---PVLCS-TWK 56
D + LCFSP L A + + ++ W++ P+ +I+ P S W
Sbjct: 236 DVIHCLCFSPNRYWLCAAT-QSSIKIWDLESKSIVDDLRPEFNITSKKAQVPYCVSLAWS 294
Query: 57 DDGTTVFSGGCDKQVKMWPL 76
DG+T++SG D Q+++W +
Sbjct: 295 ADGSTLYSGYTDGQIRVWAV 314
>sp|P29829|GBB2_DROME Guanine nucleotide-binding protein subunit beta-2 OS=Drosophila
melanogaster GN=Gbeta76C PE=1 SV=3
Length = 346
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 7/138 (5%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEIS-RGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
V ++ FSP N + DNQ ++++ R +GVA + K + ++ + + DDG
Sbjct: 104 VMTVAFSPSGNFVACGGMDNQCTVYDVNNRDASGVAKMVKELMGYEGFLSSCRFLDDGHL 163
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP 121
+ +G D ++ W L G + + H I ++ P+M TGS DKT K WD R+
Sbjct: 164 I-TGSGDMKICHWDLEKGVKTMDFNGHAGDIAGLSLSPDMKTYITGSVDKTAKLWDVREE 222
Query: 122 NPV-----HTQQLPDRCY 134
H + CY
Sbjct: 223 GHKQMFFGHDMDVSSVCY 240
Score = 37.7 bits (86), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 7/116 (6%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASV--PKASISHDHPVLCSTWKDDGT 60
VSS+C+ P + S D R +++ R +A P+ + L ++ G
Sbjct: 235 VSSVCYHPSGFGFASCSEDQTARMYDL-RADQQIAQYEPPQKNTGFTSCALSTS----GR 289
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYW 116
+ GG + V W + T++ H+ I ++ P LA+ SWD+ ++ W
Sbjct: 290 YLMCGGIEGNVHSWDTMKQRHTGTLSGHENRITCISLCPNGMCLASTSWDQQVRLW 345
>sp|C4Q0P6|LIS1_SCHMA Lissencephaly-1 homolog OS=Schistosoma mansoni GN=Smp_129340 PE=3
SV=1
Length = 417
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT 60
DSV + F P L + S D QV+ W+ + + K HDH V + G
Sbjct: 165 DSVQDVAFDPSGKFLASCSADMQVKLWDFT-----IYQCIKTLTGHDHNVSSVAFLPSGD 219
Query: 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYW 116
+ S DK +KMW + +G T H I+ V PE NLLA+ S D T++ W
Sbjct: 220 FLVSASRDKTIKMWEVSTGYCTKTFIGHTEWIRSVRPSPEGNLLASCSNDHTIRIW 275
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 21/176 (11%)
Query: 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTT 61
+VSS+ F P + LV+ S D ++ WE+S G K I H + +G
Sbjct: 208 NVSSVAFLPSGDFLVSASRDKTIKMWEVSTG-----YCTKTFIGHTEWIRSVRPSPEGNL 262
Query: 62 VFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPE----------MN---LLATGS 108
+ S D +++W + S V + H+ ++ +AW MN LL +GS
Sbjct: 263 LASCSNDHTIRIWSVESRECQVVLRGHEHVVECIAWASHPQNLNSLPSSMNSSLLLVSGS 322
Query: 109 WDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYP---LMVVGTADRNLVVFNLQNPQ 161
D+T+++WD + D V +P L++ + D+ + V++L+N +
Sbjct: 323 RDRTIRFWDVNIGICLFVLIGHDNWVRQLVFHPHGRLLLSASDDKTIRVWDLKNRR 378
Score = 50.4 bits (119), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62
++ + F P N+ V+ S D ++ W+ G H V + G +
Sbjct: 125 ITRVLFHPHYNVFVSASEDASIKVWDYETG-----EFEHTLKGHTDSVQDVAFDPSGKFL 179
Query: 63 FSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWD 117
S D QVK+W T+ HD + VA++P + L + S DKT+K W+
Sbjct: 180 ASCSADMQVKLWDFTIYQCIKTLTGHDHNVSSVAFLPSGDFLVSASRDKTIKMWE 234
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 14 ILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKM 73
+LV+ S D +R W+++ + I HD+ V + G + S DK +++
Sbjct: 317 LLVSGSRDRTIRFWDVN-----IGICLFVLIGHDNWVRQLVFHPHGRLLLSASDDKTIRV 371
Query: 74 WPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLA----TGSWDKTLKYWDTR 119
W L + T+ H + + ++N LA TGS D+T+ WD R
Sbjct: 372 WDLKNRRCHKTLNAHSHFVTSL----DVNRLAPYAITGSVDQTIHIWDCR 417
Score = 31.2 bits (69), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 84 TVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT 126
T+ H +PI V + P N+ + S D ++K WD HT
Sbjct: 117 TLTGHRSPITRVLFHPHYNVFVSASEDASIKVWDYETGEFEHT 159
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,095,990
Number of Sequences: 539616
Number of extensions: 3212742
Number of successful extensions: 14210
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 591
Number of HSP's that attempted gapping in prelim test: 7405
Number of HSP's gapped (non-prelim): 4946
length of query: 194
length of database: 191,569,459
effective HSP length: 111
effective length of query: 83
effective length of database: 131,672,083
effective search space: 10928782889
effective search space used: 10928782889
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)