Query 039044
Match_columns 194
No_of_seqs 429 out of 1120
Neff 11.9
Searched_HMMs 29240
Date Mon Mar 25 09:18:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039044.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039044hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.3E-38 1.5E-42 222.8 22.8 189 2-192 18-214 (345)
2 3ow8_A WD repeat-containing pr 100.0 2.1E-37 7.2E-42 217.3 25.5 184 2-192 124-310 (321)
3 4gqb_B Methylosome protein 50; 100.0 1.5E-37 5.3E-42 219.8 24.9 187 2-192 84-278 (344)
4 2ynn_A Coatomer subunit beta'; 100.0 1.8E-37 6E-42 216.2 24.6 186 1-192 14-206 (304)
5 4gqb_B Methylosome protein 50; 100.0 2.8E-37 9.6E-42 218.4 25.7 183 1-191 128-319 (344)
6 4ery_A WD repeat-containing pr 100.0 1.6E-36 5.5E-41 211.9 28.0 186 1-192 24-212 (312)
7 2pbi_B Guanine nucleotide-bind 100.0 9.6E-37 3.3E-41 216.6 27.2 184 2-192 156-346 (354)
8 1vyh_C Platelet-activating fac 100.0 8.4E-37 2.9E-41 220.8 26.4 176 1-183 109-287 (410)
9 1got_B GT-beta; complex (GTP-b 100.0 7.6E-37 2.6E-41 216.0 25.3 183 2-192 145-332 (340)
10 3ow8_A WD repeat-containing pr 100.0 2.4E-36 8.4E-41 211.9 26.3 184 2-192 82-268 (321)
11 2ynn_A Coatomer subunit beta'; 100.0 1.6E-36 5.6E-41 211.3 24.9 184 2-192 57-248 (304)
12 1vyh_C Platelet-activating fac 100.0 3.2E-36 1.1E-40 217.8 25.9 185 1-192 151-358 (410)
13 2pm7_B Protein transport prote 100.0 6.2E-36 2.1E-40 207.8 26.4 189 1-192 10-227 (297)
14 2pbi_B Guanine nucleotide-bind 100.0 1.1E-35 3.8E-40 211.1 28.2 192 1-192 65-304 (354)
15 3frx_A Guanine nucleotide-bind 100.0 5.8E-36 2E-40 209.8 26.2 189 1-192 18-216 (319)
16 1got_B GT-beta; complex (GTP-b 100.0 1.5E-35 5.1E-40 209.4 27.0 189 2-192 99-290 (340)
17 3frx_A Guanine nucleotide-bind 100.0 5.1E-35 1.8E-39 205.0 26.4 182 1-191 66-256 (319)
18 3iz6_a 40S ribosomal protein R 100.0 1.1E-35 3.6E-40 213.1 23.2 191 2-192 159-364 (380)
19 2xzm_R RACK1; ribosome, transl 100.0 3.5E-35 1.2E-39 207.7 25.6 189 1-192 22-233 (343)
20 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.8E-35 6.1E-40 209.4 23.0 189 1-192 62-272 (345)
21 2hes_X YDR267CP; beta-propelle 100.0 7E-35 2.4E-39 205.2 25.5 186 1-191 15-218 (330)
22 1nr0_A Actin interacting prote 100.0 6.3E-35 2.1E-39 220.4 26.6 192 1-192 60-344 (611)
23 4g56_B MGC81050 protein; prote 100.0 3.2E-35 1.1E-39 209.0 23.4 184 1-192 140-332 (357)
24 1erj_A Transcriptional repress 100.0 9.5E-35 3.2E-39 209.0 25.8 191 1-192 65-276 (393)
25 2hes_X YDR267CP; beta-propelle 100.0 6E-35 2E-39 205.6 23.3 190 1-191 59-268 (330)
26 2pm7_B Protein transport prote 100.0 3.4E-34 1.2E-38 199.0 26.1 189 1-192 54-274 (297)
27 1nr0_A Actin interacting prote 100.0 7.6E-35 2.6E-39 220.0 24.6 191 1-192 191-511 (611)
28 1erj_A Transcriptional repress 100.0 1.9E-34 6.6E-39 207.4 25.2 184 3-192 126-330 (393)
29 3bg1_A Protein SEC13 homolog; 100.0 9.4E-36 3.2E-40 208.5 17.7 189 1-192 14-236 (316)
30 2aq5_A Coronin-1A; WD40 repeat 100.0 2E-34 6.8E-39 207.8 24.9 191 1-191 82-286 (402)
31 3dwl_C Actin-related protein 2 100.0 2.4E-35 8E-40 210.7 19.3 188 1-192 12-225 (377)
32 3vl1_A 26S proteasome regulato 100.0 1.6E-34 5.4E-39 209.0 23.0 183 4-192 101-311 (420)
33 3dm0_A Maltose-binding peripla 100.0 3.4E-34 1.2E-38 219.2 25.8 190 1-192 383-581 (694)
34 3mmy_A MRNA export factor; mRN 100.0 5.5E-34 1.9E-38 202.4 25.0 186 1-192 40-335 (368)
35 2xzm_R RACK1; ribosome, transl 100.0 1.2E-33 4.3E-38 199.8 26.5 182 2-192 78-275 (343)
36 4g56_B MGC81050 protein; prote 100.0 1.9E-34 6.6E-39 205.0 22.4 187 2-192 96-290 (357)
37 4e54_B DNA damage-binding prot 100.0 5E-35 1.7E-39 212.9 19.1 187 2-192 121-316 (435)
38 2j04_B YDR362CP, TAU91; beta p 100.0 3E-34 1E-38 212.4 23.2 189 1-192 208-417 (524)
39 3iz6_a 40S ribosomal protein R 100.0 8.6E-35 2.9E-39 208.4 19.5 186 1-192 67-269 (380)
40 4ery_A WD repeat-containing pr 100.0 2E-33 7E-38 196.2 25.5 183 2-191 67-256 (312)
41 3dwl_C Actin-related protein 2 100.0 4E-35 1.4E-39 209.5 17.2 190 1-192 56-271 (377)
42 4h5i_A Guanine nucleotide-exch 100.0 3.9E-34 1.3E-38 203.9 21.9 183 2-192 135-332 (365)
43 3jrp_A Fusion protein of prote 100.0 1.8E-33 6.1E-38 200.6 24.3 189 1-192 12-229 (379)
44 1gxr_A ESG1, transducin-like e 100.0 6.3E-33 2.2E-37 194.9 26.8 185 2-192 99-285 (337)
45 1gxr_A ESG1, transducin-like e 100.0 1E-32 3.6E-37 193.8 26.5 188 1-192 52-244 (337)
46 3vl1_A 26S proteasome regulato 100.0 1.4E-33 4.7E-38 204.1 22.1 185 1-191 140-353 (420)
47 3zwl_B Eukaryotic translation 100.0 9.2E-33 3.1E-37 196.2 25.0 185 1-192 33-238 (369)
48 2ymu_A WD-40 repeat protein; u 100.0 5.5E-33 1.9E-37 208.2 25.1 181 1-192 386-569 (577)
49 3ei3_B DNA damage-binding prot 100.0 2.7E-32 9.3E-37 195.4 25.3 185 1-192 74-271 (383)
50 1k8k_C P40, ARP2/3 complex 41 100.0 2.8E-32 9.6E-37 194.2 25.0 189 1-192 9-222 (372)
51 3f3f_A Nucleoporin SEH1; struc 100.0 3.2E-32 1.1E-36 191.8 24.8 191 1-192 12-238 (351)
52 3dw8_B Serine/threonine-protei 100.0 2E-32 6.7E-37 199.4 23.9 190 1-192 178-436 (447)
53 3bg1_A Protein SEC13 homolog; 100.0 1.2E-33 4E-38 197.9 16.7 189 1-192 58-282 (316)
54 3dw8_B Serine/threonine-protei 100.0 4.7E-33 1.6E-37 202.7 20.3 190 1-192 29-305 (447)
55 3jrp_A Fusion protein of prote 100.0 2.5E-32 8.4E-37 194.7 23.1 189 1-192 56-276 (379)
56 3dm0_A Maltose-binding peripla 100.0 3.2E-32 1.1E-36 208.3 24.9 182 2-191 432-621 (694)
57 4aow_A Guanine nucleotide-bind 100.0 1.3E-31 4.4E-36 188.6 26.0 190 1-192 39-235 (340)
58 3lrv_A PRE-mRNA-splicing facto 100.0 3.8E-32 1.3E-36 192.2 22.9 178 2-190 127-320 (343)
59 1k8k_C P40, ARP2/3 complex 41 100.0 7E-32 2.4E-36 192.1 24.1 186 1-191 53-263 (372)
60 3k26_A Polycomb protein EED; W 100.0 9.2E-33 3.1E-37 196.1 19.4 184 2-192 71-307 (366)
61 3ei3_B DNA damage-binding prot 100.0 3.7E-32 1.3E-36 194.7 22.7 181 2-191 165-371 (383)
62 3mkq_A Coatomer beta'-subunit; 100.0 9.1E-32 3.1E-36 208.6 24.4 185 1-191 14-205 (814)
63 1sq9_A Antiviral protein SKI8; 100.0 2.4E-31 8.1E-36 191.0 24.8 189 1-191 122-383 (397)
64 2pm9_A Protein WEB1, protein t 100.0 3E-32 1E-36 196.7 19.9 191 1-192 68-283 (416)
65 2ymu_A WD-40 repeat protein; u 100.0 3.6E-31 1.2E-35 198.4 26.5 180 2-192 346-528 (577)
66 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.4E-31 4.8E-36 195.6 23.4 183 2-191 104-326 (450)
67 3gre_A Serine/threonine-protei 100.0 5.7E-32 1.9E-36 196.7 21.0 190 1-191 64-280 (437)
68 3jro_A Fusion protein of prote 100.0 6.3E-32 2.2E-36 208.2 21.8 189 1-192 10-227 (753)
69 3i2n_A WD repeat-containing pr 100.0 1.7E-31 5.7E-36 189.1 22.0 185 1-192 19-232 (357)
70 4aez_A CDC20, WD repeat-contai 100.0 3.4E-31 1.2E-35 190.9 23.8 185 2-192 178-369 (401)
71 2xyi_A Probable histone-bindin 100.0 5.4E-31 1.9E-35 191.5 25.0 190 1-191 129-341 (430)
72 4gq1_A NUP37; propeller, trans 100.0 3.9E-32 1.3E-36 195.4 18.7 186 1-193 137-380 (393)
73 1yfq_A Cell cycle arrest prote 100.0 1.1E-31 3.8E-36 189.2 20.7 186 1-192 12-214 (342)
74 2oaj_A Protein SNI1; WD40 repe 100.0 1.7E-31 5.8E-36 208.9 23.7 182 1-192 18-231 (902)
75 3k26_A Polycomb protein EED; W 100.0 4.5E-32 1.5E-36 192.6 18.7 185 1-192 116-355 (366)
76 2xyi_A Probable histone-bindin 100.0 1.1E-30 3.8E-35 189.9 25.9 190 2-191 183-398 (430)
77 4aez_A CDC20, WD repeat-contai 100.0 1.5E-30 5.1E-35 187.6 26.2 181 1-191 135-322 (401)
78 1sq9_A Antiviral protein SKI8; 100.0 3.8E-31 1.3E-35 190.0 22.9 188 1-192 17-253 (397)
79 2j04_A TAU60, YPL007P, hypothe 100.0 2.9E-31 1E-35 194.4 22.0 176 1-191 86-286 (588)
80 2pm9_A Protein WEB1, protein t 100.0 9.9E-32 3.4E-36 194.0 19.4 187 2-192 14-235 (416)
81 4a11_B DNA excision repair pro 100.0 3.9E-30 1.3E-34 185.0 27.1 191 1-192 44-265 (408)
82 4e54_B DNA damage-binding prot 100.0 1.1E-31 3.9E-36 195.3 19.2 187 1-191 165-363 (435)
83 4ggc_A P55CDC, cell division c 100.0 2.9E-30 9.9E-35 180.2 25.6 183 3-192 28-304 (318)
84 1r5m_A SIR4-interacting protei 100.0 1.2E-30 4E-35 188.5 24.1 190 1-192 150-414 (425)
85 3sfz_A APAF-1, apoptotic pepti 100.0 1.2E-30 4.2E-35 210.1 26.2 156 1-161 616-776 (1249)
86 3mkq_A Coatomer beta'-subunit; 100.0 6.7E-31 2.3E-35 203.8 23.8 185 1-192 56-248 (814)
87 2aq5_A Coronin-1A; WD40 repeat 100.0 8.6E-31 2.9E-35 188.8 22.8 185 4-190 38-238 (402)
88 1r5m_A SIR4-interacting protei 100.0 1.7E-30 5.8E-35 187.7 23.8 187 1-191 46-266 (425)
89 2w18_A PALB2, fancn, partner a 100.0 7.6E-31 2.6E-35 181.8 20.8 185 2-192 113-346 (356)
90 4gga_A P55CDC, cell division c 100.0 8E-30 2.7E-34 184.8 26.3 189 2-192 149-384 (420)
91 3i2n_A WD repeat-containing pr 100.0 1.1E-30 3.7E-35 184.9 20.8 187 1-191 66-279 (357)
92 3f3f_A Nucleoporin SEH1; struc 100.0 3.4E-30 1.1E-34 181.4 22.8 192 1-192 58-326 (351)
93 3zwl_B Eukaryotic translation 100.0 3E-29 1E-33 178.1 27.4 189 2-192 117-335 (369)
94 2j04_B YDR362CP, TAU91; beta p 100.0 1.7E-31 6E-36 197.7 16.3 152 2-158 268-427 (524)
95 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-30 4.9E-35 184.1 19.6 187 2-192 78-280 (343)
96 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-29 3.9E-34 185.5 24.9 181 2-186 151-368 (450)
97 4a11_B DNA excision repair pro 100.0 1.7E-29 5.8E-34 181.6 25.4 186 1-192 100-354 (408)
98 3gre_A Serine/threonine-protei 100.0 1.8E-30 6E-35 188.9 20.4 184 3-192 171-429 (437)
99 3jro_A Fusion protein of prote 100.0 1.9E-30 6.6E-35 200.0 21.2 189 1-192 54-274 (753)
100 3v7d_B Cell division control p 100.0 1.9E-29 6.7E-34 184.7 25.2 180 3-192 125-330 (464)
101 4aow_A Guanine nucleotide-bind 100.0 3.9E-29 1.3E-33 175.9 25.8 186 2-192 130-326 (340)
102 3sfz_A APAF-1, apoptotic pepti 100.0 1.7E-29 5.8E-34 203.5 26.4 185 1-192 658-902 (1249)
103 2j04_A TAU60, YPL007P, hypothe 100.0 9E-30 3.1E-34 186.6 21.6 182 1-191 16-243 (588)
104 1pgu_A Actin interacting prote 100.0 2.1E-29 7.3E-34 189.8 23.7 186 3-192 67-272 (615)
105 4h5i_A Guanine nucleotide-exch 100.0 8.3E-30 2.8E-34 181.7 19.5 156 1-160 177-344 (365)
106 2oaj_A Protein SNI1; WD40 repe 100.0 1.2E-29 4.2E-34 198.4 21.4 182 1-190 59-294 (902)
107 1yfq_A Cell cycle arrest prote 100.0 1.3E-28 4.5E-33 173.5 24.6 179 1-192 102-312 (342)
108 3v7d_B Cell division control p 100.0 1.4E-28 4.7E-33 180.2 25.0 187 1-192 204-411 (464)
109 3odt_A Protein DOA1; ubiquitin 100.0 2.8E-28 9.7E-33 169.7 24.8 177 1-191 19-202 (313)
110 1pgu_A Actin interacting prote 100.0 4.8E-29 1.6E-33 187.9 22.3 186 1-192 19-227 (615)
111 3vu4_A KMHSV2; beta-propeller 100.0 1.8E-28 6.1E-33 174.2 21.5 182 1-192 20-260 (355)
112 3odt_A Protein DOA1; ubiquitin 100.0 4.4E-28 1.5E-32 168.7 22.9 179 1-191 60-243 (313)
113 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9.6E-28 3.3E-32 175.0 25.1 180 2-192 241-427 (445)
114 4gq1_A NUP37; propeller, trans 100.0 3.4E-29 1.1E-33 180.1 14.9 153 9-161 98-288 (393)
115 4gga_A P55CDC, cell division c 100.0 2.4E-27 8.3E-32 171.8 23.8 180 3-189 108-293 (420)
116 1p22_A F-BOX/WD-repeat protein 100.0 5.2E-27 1.8E-31 170.7 25.4 176 2-192 175-354 (435)
117 3vu4_A KMHSV2; beta-propeller 100.0 2.6E-27 8.9E-32 168.2 23.1 183 3-191 61-324 (355)
118 2w18_A PALB2, fancn, partner a 100.0 9.9E-28 3.4E-32 166.3 19.1 149 2-157 180-355 (356)
119 1p22_A F-BOX/WD-repeat protein 100.0 1.1E-26 3.6E-31 169.1 24.6 176 2-192 135-314 (435)
120 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4E-26 1.4E-30 166.4 25.4 177 2-192 201-380 (445)
121 3bws_A Protein LP49; two-domai 100.0 1.4E-26 4.7E-31 168.1 22.1 186 2-190 124-320 (433)
122 2oit_A Nucleoporin 214KDA; NH2 100.0 2.8E-27 9.6E-32 172.0 18.3 187 2-191 38-259 (434)
123 1l0q_A Surface layer protein; 100.0 8.1E-26 2.8E-30 162.1 25.6 181 2-192 33-219 (391)
124 3bws_A Protein LP49; two-domai 100.0 1.2E-25 4.1E-30 163.2 23.7 182 2-192 171-364 (433)
125 2hqs_A Protein TOLB; TOLB, PAL 99.9 6.9E-25 2.4E-29 158.7 25.6 180 2-192 180-373 (415)
126 1l0q_A Surface layer protein; 99.9 8.6E-25 3E-29 156.7 25.3 179 2-190 75-261 (391)
127 2oit_A Nucleoporin 214KDA; NH2 99.9 1.2E-25 4E-30 163.5 20.9 158 2-160 94-279 (434)
128 3mmy_A MRNA export factor; mRN 99.9 4.1E-26 1.4E-30 161.9 16.5 152 1-158 87-345 (368)
129 4ggc_A P55CDC, cell division c 99.9 2.9E-24 9.8E-29 149.8 22.2 157 2-160 152-316 (318)
130 2ecf_A Dipeptidyl peptidase IV 99.9 6.7E-24 2.3E-28 163.4 20.2 184 2-191 38-304 (741)
131 2ojh_A Uncharacterized protein 99.9 3.6E-23 1.2E-27 142.5 20.1 187 2-193 86-292 (297)
132 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.3E-22 1.1E-26 144.8 23.5 175 2-186 224-411 (415)
133 3vgz_A Uncharacterized protein 99.9 2E-21 6.9E-26 137.3 25.9 182 3-192 143-333 (353)
134 2ojh_A Uncharacterized protein 99.9 5.4E-22 1.9E-26 136.6 22.3 182 2-192 43-236 (297)
135 1xfd_A DIP, dipeptidyl aminope 99.9 4.3E-23 1.5E-27 158.5 16.3 180 3-191 19-273 (723)
136 1ri6_A Putative isomerase YBHE 99.9 4E-21 1.4E-25 135.2 23.2 186 2-191 85-295 (343)
137 1ri6_A Putative isomerase YBHE 99.9 2E-21 6.7E-26 136.7 21.2 185 2-191 39-249 (343)
138 1xfd_A DIP, dipeptidyl aminope 99.9 6.1E-22 2.1E-26 152.1 20.0 183 3-190 63-323 (723)
139 1nir_A Nitrite reductase; hemo 99.9 1.8E-21 6.1E-26 145.1 21.0 177 7-192 144-343 (543)
140 3u4y_A Uncharacterized protein 99.9 5.2E-21 1.8E-25 134.3 21.9 180 5-191 44-239 (331)
141 3vgz_A Uncharacterized protein 99.9 1.5E-20 5.1E-25 132.9 23.8 184 2-191 42-249 (353)
142 3hfq_A Uncharacterized protein 99.9 6.9E-20 2.4E-24 129.5 24.0 191 2-192 87-305 (347)
143 3hfq_A Uncharacterized protein 99.9 2E-20 6.7E-25 132.3 21.1 185 3-191 42-258 (347)
144 1k32_A Tricorn protease; prote 99.9 7.5E-21 2.6E-25 151.4 19.6 179 2-192 297-491 (1045)
145 2z3z_A Dipeptidyl aminopeptida 99.9 6.2E-21 2.1E-25 146.3 17.7 181 2-191 83-330 (706)
146 2z3z_A Dipeptidyl aminopeptida 99.9 1E-20 3.6E-25 145.0 18.7 183 2-191 122-374 (706)
147 3u4y_A Uncharacterized protein 99.9 8.8E-20 3E-24 128.0 21.6 180 6-191 3-194 (331)
148 2ecf_A Dipeptidyl peptidase IV 99.9 3.5E-20 1.2E-24 142.8 20.5 181 2-191 153-398 (741)
149 1pby_B Quinohemoprotein amine 99.9 8.4E-20 2.9E-24 128.1 20.2 175 3-190 36-297 (337)
150 4a5s_A Dipeptidyl peptidase 4 99.9 4E-20 1.4E-24 142.6 19.7 180 3-191 19-278 (740)
151 3scy_A Hypothetical bacterial 99.9 1E-18 3.5E-23 124.1 25.5 185 4-191 103-324 (361)
152 1nir_A Nitrite reductase; hemo 99.9 4E-19 1.4E-23 132.5 23.1 180 3-190 181-388 (543)
153 3o4h_A Acylamino-acid-releasin 99.9 5.6E-20 1.9E-24 138.3 18.7 178 2-190 23-212 (582)
154 1z68_A Fibroblast activation p 99.9 1E-20 3.4E-25 145.4 13.7 176 5-190 20-270 (719)
155 1jof_A Carboxy-CIS,CIS-muconat 99.8 6.8E-19 2.3E-23 125.4 21.5 186 2-192 41-274 (365)
156 3scy_A Hypothetical bacterial 99.8 1.4E-18 4.9E-23 123.4 22.3 177 3-181 157-360 (361)
157 1jmx_B Amine dehydrogenase; ox 99.8 7.1E-19 2.4E-23 124.0 20.6 175 2-190 44-312 (349)
158 1k32_A Tricorn protease; prote 99.8 4.4E-19 1.5E-23 141.3 20.6 179 2-192 380-627 (1045)
159 3o4h_A Acylamino-acid-releasin 99.8 6.1E-19 2.1E-23 132.7 18.7 171 3-192 112-301 (582)
160 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.7E-18 5.9E-23 123.3 19.4 190 3-192 85-329 (365)
161 1z68_A Fibroblast activation p 99.8 9.1E-20 3.1E-24 140.1 13.1 179 3-189 62-328 (719)
162 1pby_B Quinohemoprotein amine 99.8 6.3E-18 2.2E-22 118.5 20.1 151 2-162 83-313 (337)
163 1jmx_B Amine dehydrogenase; ox 99.8 5.4E-18 1.9E-22 119.5 19.8 152 3-162 94-328 (349)
164 1xip_A Nucleoporin NUP159; bet 99.8 7.6E-18 2.6E-22 119.8 19.5 178 2-189 39-230 (388)
165 3pe7_A Oligogalacturonate lyas 99.8 1.6E-17 5.6E-22 118.8 20.5 179 6-191 41-256 (388)
166 4a5s_A Dipeptidyl peptidase 4 99.8 5.5E-18 1.9E-22 130.8 18.1 180 5-191 66-338 (740)
167 3fvz_A Peptidyl-glycine alpha- 99.8 7.6E-16 2.6E-20 108.2 25.6 177 1-182 24-250 (329)
168 3azo_A Aminopeptidase; POP fam 99.8 1.3E-16 4.3E-21 121.7 19.4 176 3-189 132-351 (662)
169 1q7f_A NHL, brain tumor CG1071 99.8 2.8E-15 9.7E-20 103.1 23.2 186 2-191 31-225 (286)
170 1q7f_A NHL, brain tumor CG1071 99.7 5.9E-15 2E-19 101.5 24.6 180 2-190 78-268 (286)
171 3azo_A Aminopeptidase; POP fam 99.7 4E-16 1.4E-20 118.9 19.0 179 5-191 81-312 (662)
172 3fvz_A Peptidyl-glycine alpha- 99.7 6.2E-15 2.1E-19 103.6 22.6 187 2-190 92-309 (329)
173 3c5m_A Oligogalacturonate lyas 99.7 2.1E-16 7E-21 113.3 14.0 182 3-191 38-256 (396)
174 2xdw_A Prolyl endopeptidase; a 99.7 2.8E-15 9.6E-20 115.3 21.0 183 3-191 127-354 (710)
175 3pe7_A Oligogalacturonate lyas 99.7 6.2E-16 2.1E-20 110.7 16.3 181 4-190 84-307 (388)
176 2oiz_A Aromatic amine dehydrog 99.7 4.5E-15 1.5E-19 105.6 20.3 180 5-185 54-360 (361)
177 2gop_A Trilobed protease; beta 99.7 1.9E-15 6.5E-20 106.6 17.0 173 2-191 60-280 (347)
178 2dg1_A DRP35, lactonase; beta 99.7 9.3E-14 3.2E-18 97.5 25.3 183 3-190 47-250 (333)
179 3e5z_A Putative gluconolactona 99.7 2.1E-14 7.2E-19 99.3 21.4 179 3-190 30-235 (296)
180 1rwi_B Serine/threonine-protei 99.7 7.6E-14 2.6E-18 95.1 21.9 181 2-190 68-251 (270)
181 2bkl_A Prolyl endopeptidase; m 99.7 1.8E-14 6.2E-19 110.6 20.8 181 2-190 122-336 (695)
182 3no2_A Uncharacterized protein 99.7 3.4E-14 1.2E-18 97.4 20.0 169 11-192 4-184 (276)
183 3e5z_A Putative gluconolactona 99.7 9.6E-14 3.3E-18 96.0 22.4 181 2-191 70-275 (296)
184 3c5m_A Oligogalacturonate lyas 99.7 2.5E-15 8.7E-20 107.6 14.8 177 6-192 147-370 (396)
185 2dg1_A DRP35, lactonase; beta 99.7 8.8E-15 3E-19 102.7 17.0 178 2-190 7-199 (333)
186 3no2_A Uncharacterized protein 99.7 1.6E-13 5.3E-18 94.1 21.7 181 2-192 38-232 (276)
187 3dsm_A Uncharacterized protein 99.7 6.2E-14 2.1E-18 98.5 19.7 185 2-190 85-284 (328)
188 2oiz_A Aromatic amine dehydrog 99.6 3.2E-14 1.1E-18 101.2 18.0 107 11-124 14-144 (361)
189 1rwi_B Serine/threonine-protei 99.6 2.1E-13 7.3E-18 92.9 21.1 180 2-190 25-209 (270)
190 2gop_A Trilobed protease; beta 99.6 7.2E-14 2.5E-18 98.5 18.9 168 3-191 17-233 (347)
191 2xdw_A Prolyl endopeptidase; a 99.6 2.8E-13 9.7E-18 104.2 22.4 185 3-191 173-398 (710)
192 1qks_A Cytochrome CD1 nitrite 99.6 4.4E-13 1.5E-17 100.3 22.7 174 11-192 166-361 (567)
193 3dsm_A Uncharacterized protein 99.6 5.1E-13 1.7E-17 93.8 20.4 177 4-190 47-242 (328)
194 1yr2_A Prolyl oligopeptidase; 99.6 3.4E-13 1.2E-17 104.2 20.4 181 2-190 164-380 (741)
195 2z2n_A Virginiamycin B lyase; 99.6 8.7E-12 3E-16 85.9 24.2 179 2-190 16-200 (299)
196 1qks_A Cytochrome CD1 nitrite 99.6 6.2E-12 2.1E-16 94.2 24.2 181 2-191 198-407 (567)
197 2bkl_A Prolyl endopeptidase; m 99.6 1.1E-12 3.8E-17 100.7 20.6 183 4-191 171-381 (695)
198 3g4e_A Regucalcin; six bladed 99.6 5.5E-12 1.9E-16 87.3 22.2 186 2-192 55-261 (297)
199 2z2n_A Virginiamycin B lyase; 99.6 1.8E-11 6E-16 84.4 24.2 180 2-190 58-242 (299)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 1.2E-11 4.1E-16 85.9 20.8 182 2-191 72-286 (314)
201 1xip_A Nucleoporin NUP159; bet 99.5 4.6E-13 1.6E-17 95.4 13.6 127 3-145 90-230 (388)
202 2qe8_A Uncharacterized protein 99.5 2E-11 6.8E-16 86.2 21.4 190 2-192 68-310 (343)
203 3hrp_A Uncharacterized protein 99.5 2.6E-11 9E-16 87.6 22.2 181 2-189 132-339 (409)
204 2qc5_A Streptogramin B lactona 99.5 1.2E-10 4.3E-15 80.1 24.0 180 2-190 21-205 (300)
205 2qc5_A Streptogramin B lactona 99.5 2.5E-10 8.5E-15 78.6 24.8 179 2-190 63-247 (300)
206 3iuj_A Prolyl endopeptidase; h 99.5 5.3E-12 1.8E-16 97.0 17.5 179 3-191 131-344 (693)
207 3sjl_D Methylamine dehydrogena 99.5 1.6E-11 5.6E-16 87.2 18.5 146 7-159 39-208 (386)
208 1yr2_A Prolyl oligopeptidase; 99.5 5.3E-11 1.8E-15 92.1 22.4 183 4-191 212-425 (741)
209 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 8E-11 2.7E-15 81.8 21.0 183 3-190 20-243 (314)
210 3dr2_A Exported gluconolactona 99.5 4.2E-11 1.4E-15 83.2 19.5 178 2-191 87-295 (305)
211 2ghs_A AGR_C_1268P; regucalcin 99.5 1.2E-10 4.2E-15 81.6 21.8 180 2-192 91-291 (326)
212 2ece_A 462AA long hypothetical 99.4 8.9E-11 3E-15 84.4 20.0 183 5-193 142-401 (462)
213 2mad_H Methylamine dehydrogena 99.4 3E-10 1E-14 81.1 22.6 182 5-191 70-337 (373)
214 2iwa_A Glutamine cyclotransfer 99.4 4.3E-10 1.5E-14 76.1 21.7 178 4-192 24-225 (266)
215 3hrp_A Uncharacterized protein 99.4 3.6E-10 1.2E-14 81.7 22.5 182 6-190 176-397 (409)
216 3g4e_A Regucalcin; six bladed 99.4 5E-10 1.7E-14 77.5 22.4 178 4-191 16-217 (297)
217 3dr2_A Exported gluconolactona 99.4 1.7E-10 5.7E-15 80.2 19.6 178 3-189 47-255 (305)
218 2ghs_A AGR_C_1268P; regucalcin 99.4 1E-09 3.5E-14 76.9 22.6 175 4-190 52-247 (326)
219 3nol_A Glutamine cyclotransfer 99.4 1.2E-09 4.1E-14 73.3 20.4 178 4-192 46-244 (262)
220 2mad_H Methylamine dehydrogena 99.3 2E-09 6.8E-14 76.9 22.7 144 9-162 29-198 (373)
221 2hz6_A Endoplasmic reticulum t 99.3 2.3E-13 8E-18 97.0 1.8 145 11-164 8-154 (369)
222 3iuj_A Prolyl endopeptidase; h 99.3 1.5E-09 5.3E-14 83.4 21.1 184 4-192 178-390 (693)
223 2ece_A 462AA long hypothetical 99.3 4.4E-10 1.5E-14 80.9 16.5 181 10-192 93-340 (462)
224 3c75_H MADH, methylamine dehyd 99.3 1.1E-09 3.8E-14 79.1 18.6 179 5-191 122-389 (426)
225 1kb0_A Quinohemoprotein alcoho 99.3 2.4E-09 8.2E-14 82.1 21.2 183 5-191 247-538 (677)
226 3c75_H MADH, methylamine dehyd 99.3 1.2E-09 4E-14 79.0 17.8 144 10-161 82-250 (426)
227 1yiq_A Quinohemoprotein alcoho 99.3 4.4E-09 1.5E-13 80.8 21.8 184 5-192 239-537 (689)
228 3sjl_D Methylamine dehydrogena 99.3 6.5E-10 2.2E-14 79.1 15.9 136 53-191 38-206 (386)
229 3nok_A Glutaminyl cyclase; bet 99.2 1E-08 3.4E-13 68.9 19.6 176 4-191 58-253 (268)
230 3mbr_X Glutamine cyclotransfer 99.2 4.7E-08 1.6E-12 65.1 21.8 178 4-192 24-223 (243)
231 2qe8_A Uncharacterized protein 99.2 1.4E-09 4.9E-14 76.7 15.2 171 2-190 18-212 (343)
232 2hz6_A Endoplasmic reticulum t 99.2 7.3E-12 2.5E-16 89.3 3.0 169 5-185 42-216 (369)
233 3qqz_A Putative uncharacterize 99.2 1.3E-07 4.5E-12 63.7 23.0 184 2-190 28-241 (255)
234 1mda_H Methylamine dehydrogena 99.1 8.9E-09 3E-13 73.2 15.7 176 5-192 69-333 (368)
235 1npe_A Nidogen, entactin; glyc 99.1 3.9E-07 1.3E-11 61.9 23.5 177 2-185 80-263 (267)
236 2fp8_A Strictosidine synthase; 99.1 2E-07 7E-12 65.1 21.6 185 3-191 21-247 (322)
237 1fwx_A Nitrous oxide reductase 99.1 3.3E-09 1.1E-13 78.9 12.4 184 3-193 136-408 (595)
238 1npe_A Nidogen, entactin; glyc 99.1 6.3E-07 2.1E-11 60.9 22.6 176 13-191 2-185 (267)
239 1fwx_A Nitrous oxide reductase 99.0 2.6E-08 8.9E-13 74.2 16.5 173 11-191 100-348 (595)
240 2xe4_A Oligopeptidase B; hydro 99.0 1.1E-07 3.6E-12 74.0 18.4 112 3-121 176-305 (751)
241 1kv9_A Type II quinohemoprotei 99.0 2.6E-07 8.8E-12 70.9 20.2 184 5-192 234-520 (668)
242 1mda_H Methylamine dehydrogena 99.0 2.8E-08 9.7E-13 70.6 13.7 91 23-120 47-158 (368)
243 2iwa_A Glutamine cyclotransfer 98.9 3.2E-07 1.1E-11 62.1 17.4 135 49-187 22-165 (266)
244 3nok_A Glutaminyl cyclase; bet 98.9 2.5E-07 8.5E-12 62.2 16.2 134 49-188 56-195 (268)
245 3nol_A Glutamine cyclotransfer 98.9 2.3E-07 8E-12 62.3 15.2 110 49-162 44-158 (262)
246 2p4o_A Hypothetical protein; p 98.8 2.4E-06 8.1E-11 59.3 19.5 178 3-189 34-228 (306)
247 1flg_A Protein (quinoprotein e 98.8 4.2E-06 1.5E-10 63.2 21.9 183 6-193 251-549 (582)
248 2ad6_A Methanol dehydrogenase 98.8 3.6E-06 1.2E-10 63.5 21.2 183 6-193 240-527 (571)
249 1w6s_A Methanol dehydrogenase 98.8 6.7E-06 2.3E-10 62.3 22.0 183 6-193 246-536 (599)
250 3q7m_A Lipoprotein YFGL, BAMB; 98.8 2.7E-06 9.2E-11 60.6 18.1 150 11-166 52-214 (376)
251 3hxj_A Pyrrolo-quinoline quino 98.7 5.3E-07 1.8E-11 62.9 13.8 171 4-191 140-313 (330)
252 1kb0_A Quinohemoprotein alcoho 98.7 6.2E-07 2.1E-11 68.9 14.9 145 13-158 328-566 (677)
253 2p4o_A Hypothetical protein; p 98.7 2.1E-05 7.2E-10 54.5 21.4 181 3-191 74-276 (306)
254 3mbr_X Glutamine cyclotransfer 98.7 6.5E-06 2.2E-10 54.9 16.8 113 48-162 21-136 (243)
255 1yiq_A Quinohemoprotein alcoho 98.7 9E-06 3.1E-10 62.7 19.4 150 12-163 121-342 (689)
256 3tc9_A Hypothetical hydrolase; 98.7 3.8E-06 1.3E-10 61.1 16.3 149 3-159 139-301 (430)
257 3hxj_A Pyrrolo-quinoline quino 98.6 3.9E-06 1.3E-10 58.5 15.5 162 12-189 107-271 (330)
258 2p9w_A MAL S 1 allergenic prot 98.6 3.7E-05 1.3E-09 53.5 24.0 156 4-160 16-216 (334)
259 2fp8_A Strictosidine synthase; 98.6 1.8E-05 6.1E-10 55.2 18.3 179 3-189 82-299 (322)
260 2xe4_A Oligopeptidase B; hydro 98.6 1.3E-06 4.5E-11 67.9 13.3 137 49-189 175-335 (751)
261 3amr_A 3-phytase; beta-propell 98.6 3.8E-05 1.3E-09 53.9 19.0 174 12-193 40-252 (355)
262 1k3i_A Galactose oxidase precu 98.6 1.7E-05 5.7E-10 60.9 18.4 182 5-192 247-530 (656)
263 3q7m_A Lipoprotein YFGL, BAMB; 98.5 2.2E-05 7.7E-10 55.8 17.7 106 59-165 188-302 (376)
264 3sre_A PON1, serum paraoxonase 98.5 7E-05 2.4E-09 53.0 22.7 186 4-190 53-284 (355)
265 3tc9_A Hypothetical hydrolase; 98.5 2.1E-05 7.3E-10 57.2 17.6 139 49-190 138-287 (430)
266 2p9w_A MAL S 1 allergenic prot 98.5 7E-05 2.4E-09 52.1 18.3 143 48-190 13-202 (334)
267 4hw6_A Hypothetical protein, I 98.5 6.6E-05 2.3E-09 54.7 18.8 149 3-158 141-303 (433)
268 1k3i_A Galactose oxidase precu 98.5 4E-05 1.4E-09 58.8 18.4 115 5-122 190-325 (656)
269 4a2l_A BT_4663, two-component 98.5 0.00026 8.8E-09 55.6 24.3 183 2-190 311-515 (795)
270 3qqz_A Putative uncharacterize 98.5 8.7E-05 3E-09 50.0 19.5 152 4-157 73-251 (255)
271 4a2l_A BT_4663, two-component 98.4 0.00022 7.5E-09 55.9 22.3 183 2-190 358-560 (795)
272 1kv9_A Type II quinohemoprotei 98.4 0.00014 4.9E-09 55.9 19.3 149 12-163 117-337 (668)
273 3v64_C Agrin; beta propeller, 98.4 0.00023 7.9E-09 50.3 23.6 177 4-190 37-220 (349)
274 3v65_B Low-density lipoprotein 98.4 0.00026 8.9E-09 50.8 21.5 168 14-190 89-263 (386)
275 1ijq_A LDL receptor, low-densi 98.4 0.00022 7.5E-09 49.7 24.1 168 14-190 3-181 (316)
276 3v64_C Agrin; beta propeller, 98.3 0.00027 9.2E-09 50.0 24.7 154 3-161 75-236 (349)
277 1w6s_A Methanol dehydrogenase 98.3 0.00026 9E-09 53.7 19.4 148 15-165 124-348 (599)
278 3v65_B Low-density lipoprotein 98.3 0.00036 1.2E-08 50.1 23.8 154 3-161 118-279 (386)
279 3v9f_A Two-component system se 98.3 0.00047 1.6E-08 54.0 20.9 181 2-191 408-601 (781)
280 1ijq_A LDL receptor, low-densi 98.3 0.00034 1.2E-08 48.7 26.6 158 3-161 32-197 (316)
281 4hw6_A Hypothetical protein, I 98.2 0.00023 7.8E-09 51.9 17.0 141 49-190 140-290 (433)
282 3p5b_L Low density lipoprotein 98.2 0.00052 1.8E-08 49.5 26.2 159 2-161 113-279 (400)
283 3p5b_L Low density lipoprotein 98.2 0.00054 1.9E-08 49.4 24.2 168 14-190 85-263 (400)
284 2ad6_A Methanol dehydrogenase 98.2 0.00058 2E-08 51.6 18.6 76 52-128 239-343 (571)
285 3kya_A Putative phosphatase; s 98.2 0.00065 2.2E-08 50.2 18.1 142 49-190 140-327 (496)
286 3v9f_A Two-component system se 98.2 0.0014 4.9E-08 51.3 21.0 179 2-190 364-556 (781)
287 2xbg_A YCF48-like protein; pho 98.1 0.00073 2.5E-08 47.3 19.5 179 3-192 124-312 (327)
288 1n7d_A LDL receptor, low-densi 98.1 0.00016 5.3E-09 56.0 13.9 157 3-160 408-572 (699)
289 3sov_A LRP-6, low-density lipo 98.0 0.0013 4.4E-08 45.9 24.0 155 3-161 37-199 (318)
290 3m0c_C LDL receptor, low-densi 98.0 0.0037 1.3E-07 49.1 25.4 158 3-161 426-591 (791)
291 1flg_A Protein (quinoprotein e 97.9 0.001 3.4E-08 50.4 15.6 78 68-146 465-547 (582)
292 3kya_A Putative phosphatase; s 97.9 0.0028 9.5E-08 46.9 16.5 153 3-158 141-340 (496)
293 3pbp_A Nucleoporin NUP82; beta 97.9 0.002 6.9E-08 46.5 15.1 114 2-116 67-208 (452)
294 3m0c_C LDL receptor, low-densi 97.8 0.0067 2.3E-07 47.7 22.5 162 21-190 403-575 (791)
295 1tl2_A L10, protein (tachylect 97.8 0.0022 7.6E-08 42.1 14.0 173 10-190 2-199 (236)
296 3a9g_A Putative uncharacterize 97.8 0.0024 8.1E-08 45.3 15.2 140 3-145 31-214 (354)
297 1n7d_A LDL receptor, low-densi 97.8 0.00049 1.7E-08 53.3 12.1 152 4-161 456-616 (699)
298 2ism_A Putative oxidoreductase 97.8 0.0043 1.5E-07 43.9 18.4 114 3-119 33-177 (352)
299 3pbp_A Nucleoporin NUP82; beta 97.7 0.007 2.4E-07 43.8 18.4 132 56-189 29-196 (452)
300 1tl2_A L10, protein (tachylect 97.7 0.004 1.4E-07 40.9 14.2 108 2-115 42-158 (236)
301 3amr_A 3-phytase; beta-propell 97.7 0.0061 2.1E-07 42.9 18.7 138 21-159 98-263 (355)
302 3sov_A LRP-6, low-density lipo 97.7 0.006 2E-07 42.5 23.6 153 3-161 81-240 (318)
303 2ism_A Putative oxidoreductase 97.6 0.0092 3.1E-07 42.2 18.6 186 3-191 77-333 (352)
304 2xzh_A Clathrin heavy chain 1; 97.5 0.011 3.7E-07 41.4 16.0 119 67-190 47-169 (365)
305 3s94_A LRP-6, low-density lipo 97.5 0.019 6.5E-07 43.9 22.4 155 3-161 42-204 (619)
306 3sre_A PON1, serum paraoxonase 97.5 0.012 4.2E-07 41.6 16.6 133 21-157 138-296 (355)
307 2g8s_A Glucose/sorbosone dehyd 97.5 0.013 4.5E-07 41.5 15.0 118 3-120 20-173 (353)
308 1cru_A Protein (soluble quinop 97.4 0.022 7.5E-07 41.8 16.3 107 3-109 29-163 (454)
309 1cru_A Protein (soluble quinop 97.3 0.027 9.2E-07 41.4 16.3 100 48-147 27-162 (454)
310 1bpo_A Protein (clathrin); cla 97.3 0.028 9.5E-07 41.0 15.7 119 67-190 46-168 (494)
311 3a9g_A Putative uncharacterize 97.3 0.025 8.5E-07 40.1 20.0 187 3-190 75-329 (354)
312 2vpj_A Kelch-like protein 12; 97.2 0.022 7.5E-07 39.0 17.8 147 11-161 62-233 (301)
313 4a0p_A LRP6, LRP-6, low-densit 97.2 0.049 1.7E-06 41.8 26.3 155 3-162 39-200 (628)
314 3ii7_A Kelch-like protein 7; p 97.1 0.029 9.8E-07 38.6 15.7 144 11-161 55-227 (306)
315 3das_A Putative oxidoreductase 97.1 0.04 1.4E-06 38.9 17.1 106 3-108 34-158 (347)
316 3s25_A Hypothetical 7-bladed b 97.1 0.037 1.3E-06 38.3 15.7 125 53-190 109-240 (302)
317 4a0p_A LRP6, LRP-6, low-densit 97.1 0.066 2.3E-06 41.1 24.3 169 14-190 8-183 (628)
318 2xbg_A YCF48-like protein; pho 97.0 0.041 1.4E-06 38.4 22.0 178 2-190 37-222 (327)
319 1zgk_A Kelch-like ECH-associat 96.9 0.048 1.6E-06 37.6 14.0 102 58-161 121-242 (308)
320 2g8s_A Glucose/sorbosone dehyd 96.9 0.063 2.1E-06 38.0 15.3 139 49-189 19-214 (353)
321 2xn4_A Kelch-like protein 2; s 96.8 0.067 2.3E-06 36.7 16.4 144 11-161 61-231 (302)
322 2vpj_A Kelch-like protein 12; 96.7 0.069 2.4E-06 36.5 16.5 144 11-161 14-186 (301)
323 2xn4_A Kelch-like protein 2; s 96.7 0.07 2.4E-06 36.5 13.6 144 11-161 108-278 (302)
324 3das_A Putative oxidoreductase 96.7 0.085 2.9E-06 37.3 14.5 102 88-189 30-156 (347)
325 3s94_A LRP-6, low-density lipo 96.7 0.14 4.8E-06 39.2 23.4 171 14-190 319-496 (619)
326 1bpo_A Protein (clathrin); cla 96.6 0.13 4.4E-06 37.6 22.0 120 47-167 150-297 (494)
327 3s25_A Hypothetical 7-bladed b 96.5 0.1 3.6E-06 36.0 15.5 142 6-161 109-257 (302)
328 2be1_A Serine/threonine-protei 96.5 0.02 6.9E-07 40.2 8.4 107 60-166 11-137 (339)
329 3ii7_A Kelch-like protein 7; p 96.4 0.13 4.4E-06 35.3 17.1 143 12-161 12-180 (306)
330 4asc_A Kelch repeat and BTB do 96.4 0.14 4.7E-06 35.4 16.2 102 58-161 98-223 (315)
331 2xzh_A Clathrin heavy chain 1; 96.2 0.18 6.1E-06 35.4 22.4 120 47-167 151-298 (365)
332 3sbq_A Nitrous-oxide reductase 96.1 0.15 5E-06 38.5 11.1 71 89-159 322-408 (638)
333 2zwa_A Leucine carboxyl methyl 96.0 0.41 1.4E-05 37.3 16.9 147 11-161 451-637 (695)
334 2wg3_C Hedgehog-interacting pr 95.9 0.34 1.2E-05 35.7 14.1 107 3-109 16-158 (463)
335 1zgk_A Kelch-like ECH-associat 95.8 0.27 9.1E-06 33.8 14.8 144 11-161 121-289 (308)
336 4asc_A Kelch repeat and BTB do 95.7 0.31 1E-05 33.6 15.0 140 14-161 7-176 (315)
337 3sbq_A Nitrous-oxide reductase 95.7 0.19 6.5E-06 37.9 10.3 106 3-108 325-453 (638)
338 2woz_A Kelch repeat and BTB do 95.5 0.35 1.2E-05 33.4 16.5 102 58-161 109-233 (318)
339 2uvk_A YJHT; unknown function, 95.5 0.41 1.4E-05 33.6 14.4 92 69-161 168-296 (357)
340 3ei3_A DNA damage-binding prot 95.3 1 3.5E-05 37.4 23.4 181 2-191 555-755 (1158)
341 2be1_A Serine/threonine-protei 95.3 0.057 1.9E-06 38.0 6.4 140 13-156 11-181 (339)
342 1xi4_A Clathrin heavy chain; a 95.1 0.2 6.8E-06 42.2 9.5 118 67-189 46-167 (1630)
343 2woz_A Kelch repeat and BTB do 94.7 0.64 2.2E-05 32.0 15.6 140 14-161 18-186 (318)
344 2zwa_A Leucine carboxyl methyl 94.3 1.4 4.9E-05 34.3 16.2 151 10-161 396-579 (695)
345 4gq2_M Nucleoporin NUP120; bet 93.3 1.5 5.2E-05 35.6 11.2 38 91-128 237-274 (950)
346 1xi4_A Clathrin heavy chain; a 93.1 3.8 0.00013 35.1 15.8 145 14-164 118-294 (1630)
347 2uvk_A YJHT; unknown function, 92.7 1.8 6.2E-05 30.3 15.9 144 11-157 19-224 (357)
348 3ei3_A DNA damage-binding prot 92.3 4.3 0.00015 33.8 22.2 109 47-158 513-635 (1158)
349 2wg3_C Hedgehog-interacting pr 91.6 3.1 0.00011 30.7 12.4 100 49-148 15-158 (463)
350 4gq2_M Nucleoporin NUP120; bet 91.4 1.2 4.1E-05 36.1 8.6 33 2-34 237-269 (950)
351 3ott_A Two-component system se 90.6 5.2 0.00018 31.4 22.4 172 2-190 64-249 (758)
352 3ott_A Two-component system se 89.6 6.3 0.00021 30.9 21.7 180 2-189 147-340 (758)
353 4fhn_B Nucleoporin NUP120; pro 89.5 1.8 6E-05 35.9 8.1 37 49-85 239-275 (1139)
354 3zwu_A Alkaline phosphatase PH 89.4 3.4 0.00012 31.6 9.0 59 133-192 480-550 (592)
355 4fhn_B Nucleoporin NUP120; pro 89.0 1.4 4.8E-05 36.5 7.2 38 91-128 239-276 (1139)
356 3qhy_B Beta-lactamase inhibito 87.4 5.2 0.00018 27.2 15.1 127 21-159 80-207 (282)
357 4a9v_A PHOX; hydrolase, beta-p 87.0 6.4 0.00022 30.1 8.9 59 133-192 480-550 (592)
358 3zwu_A Alkaline phosphatase PH 85.9 6 0.0002 30.3 8.5 58 50-107 478-548 (592)
359 3b7f_A Glycosyl hydrolase, BNR 85.8 7.6 0.00026 27.6 19.6 105 49-156 116-259 (394)
360 3qhy_B Beta-lactamase inhibito 84.6 7.5 0.00025 26.4 14.5 142 3-159 26-168 (282)
361 4a9v_A PHOX; hydrolase, beta-p 84.5 11 0.00039 28.7 9.3 61 48-108 476-549 (592)
362 3no0_A DNA gyrase subunit A; D 81.6 10 0.00035 25.8 17.4 148 11-159 79-246 (276)
363 3f7f_A Nucleoporin NUP120; nuc 79.6 4.6 0.00016 31.7 5.8 37 91-129 223-259 (729)
364 3f7f_A Nucleoporin NUP120; nuc 75.5 4.5 0.00015 31.7 4.8 35 50-86 224-258 (729)
365 3al9_A Plexin-A2; beta-propell 75.5 8.7 0.0003 29.1 6.2 70 4-73 403-476 (539)
366 3q6k_A 43.2 kDa salivary prote 73.9 22 0.00076 25.5 21.4 170 23-192 124-343 (381)
367 1q47_A Semaphorin 3A; beta pro 73.0 17 0.00059 27.1 7.2 61 13-73 422-487 (495)
368 3uc1_A DNA gyrase subunit A; D 70.4 25 0.00085 24.6 18.1 147 11-159 108-279 (327)
369 1suu_A DNA gyrase subunit A; t 67.6 28 0.00095 24.1 18.9 153 6-159 52-231 (312)
370 3ol2_B Plexin-B1; beta-propell 66.5 22 0.00077 26.8 6.6 61 13-74 401-462 (528)
371 4gz8_A Semaphorin-3A; multi-do 66.3 30 0.001 27.1 7.4 61 13-73 430-495 (667)
372 3nvq_A Semaphorin-7A; beta-pro 60.1 41 0.0014 25.8 7.1 62 13-74 381-445 (590)
373 1q47_A Semaphorin 3A; beta pro 56.2 61 0.0021 24.3 7.6 66 50-115 406-487 (495)
374 3b7f_A Glycosyl hydrolase, BNR 55.2 53 0.0018 23.3 18.2 100 13-116 23-143 (394)
375 1olz_A Semaphorin 4D; developm 54.8 59 0.002 25.4 7.3 59 13-73 416-477 (663)
376 3no0_A DNA gyrase subunit A; D 51.7 53 0.0018 22.3 15.6 116 3-119 118-245 (276)
377 3uc1_A DNA gyrase subunit A; D 50.9 61 0.0021 22.7 17.9 112 47-159 94-228 (327)
378 2cn3_A Xyloglucanase, beta-1,4 49.2 96 0.0033 24.5 17.1 104 2-108 24-151 (737)
379 3oky_A Plexin-A2; transmembran 48.0 48 0.0016 26.0 5.9 62 13-74 413-476 (681)
380 3nvq_A Semaphorin-7A; beta-pro 46.5 99 0.0034 23.9 7.3 55 61-115 382-444 (590)
381 3al9_A Plexin-A2; beta-propell 45.7 88 0.003 23.7 6.9 65 50-114 402-475 (539)
382 4fww_A Macrophage-stimulating 44.2 45 0.0016 25.1 5.2 70 3-73 407-479 (527)
383 3oky_B Putative uncharacterize 43.4 1E+02 0.0036 23.6 6.9 28 47-74 469-496 (565)
384 3kci_A Probable E3 ubiquitin-p 39.3 1E+02 0.0035 21.9 16.1 151 6-158 110-292 (389)
385 1zvt_A Topoisomerase IV subuni 37.2 92 0.0031 20.8 12.9 108 11-119 43-162 (256)
386 4hvt_A Ritya.17583.B, post-pro 34.7 1.7E+02 0.0058 23.2 18.5 172 8-183 137-360 (711)
387 4gz8_A Semaphorin-3A; multi-do 34.6 1.7E+02 0.0057 23.1 7.1 55 61-115 431-495 (667)
388 1a12_A RCC1, regulator of chro 33.8 1.3E+02 0.0044 21.5 15.8 107 48-158 232-364 (413)
389 3mez_B Mannose-specific lectin 31.6 73 0.0025 18.0 9.5 47 93-156 59-105 (113)
390 3mez_A Mannose-specific lectin 30.7 76 0.0026 17.9 6.1 17 140-156 85-101 (111)
391 1suu_A DNA gyrase subunit A; t 27.4 1.5E+02 0.0053 20.4 21.2 150 9-159 5-181 (312)
392 3l6v_A GYRA, DNA gyrase subuni 26.1 1.8E+02 0.0062 20.8 14.8 72 6-77 155-264 (370)
393 1ukf_A Avirulence protein AVRP 26.0 92 0.0031 19.8 3.6 33 90-122 119-152 (188)
394 3nvn_B Plexin-C1; beta-propell 25.9 2.1E+02 0.0072 21.4 7.5 64 11-74 352-417 (476)
395 3ol2_B Plexin-B1; beta-propell 25.8 1.9E+02 0.0066 22.0 5.9 52 141-192 401-455 (528)
396 1wp5_A Topoisomerase IV; broke 23.3 1.9E+02 0.0066 20.1 21.4 153 6-159 44-225 (323)
397 3l6v_A GYRA, DNA gyrase subuni 22.0 2.2E+02 0.0076 20.3 20.5 114 5-119 50-179 (370)
398 3oky_A Plexin-A2; transmembran 21.0 2.7E+02 0.0093 22.0 6.0 66 50-115 401-475 (681)
No 1
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=222.82 Aligned_cols=189 Identities=19% Similarity=0.254 Sum_probs=159.8
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC-
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG- 80 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~- 80 (194)
.|.+++|+|++++|++|+.|++|++|++...... .......+|...|.+++|+|++++|++|+.|+.+++|++..+.
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~--~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~ 95 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI--CKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDF 95 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE--EEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-E
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce--eeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCe
Confidence 6899999999999999999999999999876320 0112235799999999999999999999999999999998764
Q ss_pred -ceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce---eEEe---cCCeEEEEecCCCEEEEEcCCCcEE
Q 039044 81 -QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV---HTQQ---LPDRCYALTVRYPLMVVGTADRNLV 153 (194)
Q Consensus 81 -~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~---~~~~---~~~~~~~~~~~~~~l~~~~~dg~v~ 153 (194)
.+..+.+|...|.+++|+|++++|++++.|+.|++||++..... ..+. ....+++|+|++++|++++.|+.|+
T Consensus 96 ~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~ 175 (345)
T 3fm0_A 96 ECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVK 175 (345)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEE
T ss_pred EEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEE
Confidence 46678899999999999999999999999999999999876532 2332 3457889999999999999999999
Q ss_pred EEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 154 VFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 154 ~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+||.++.+.........|...|.+++|+|++++|++|+.
T Consensus 176 ~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~ 214 (345)
T 3fm0_A 176 LYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSD 214 (345)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeC
Confidence 999987654334445678899999999999999999864
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.1e-37 Score=217.32 Aligned_cols=184 Identities=18% Similarity=0.226 Sum_probs=164.2
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.+.+++|+|++++|++|+.|+.|++|++..+.. ......+...+.+++|+|++++|++|+.|+.|++||+++++.
T Consensus 124 ~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~-----~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~ 198 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK-----EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 198 (321)
T ss_dssp CCCCEEECTTSSEEEEECTTSEEEEEETTTCSE-----EEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce-----eEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcE
Confidence 467899999999999999999999999987743 445567888999999999999999999999999999999999
Q ss_pred eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecC---CeEEEEecCCCEEEEEcCCCcEEEEECC
Q 039044 82 PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP---DRCYALTVRYPLMVVGTADRNLVVFNLQ 158 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~dg~v~~~d~~ 158 (194)
+..+.+|..+|++++|+|++++|++++.|+.|++||+++++....+..+ ..+++|+|++++|++++.|+.|++||++
T Consensus 199 ~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~ 278 (321)
T 3ow8_A 199 LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG 278 (321)
T ss_dssp EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 9999999999999999999999999999999999999998887776543 4688999999999999999999999999
Q ss_pred CCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 159 NPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 159 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+.+.. .. ...|...|.+++|+|+++.|+++..
T Consensus 279 ~~~~~-~~-~~~h~~~v~~v~~s~~g~~l~s~~~ 310 (321)
T 3ow8_A 279 TRTCV-HT-FFDHQDQVWGVKYNGNGSKIVSVGD 310 (321)
T ss_dssp TTEEE-EE-ECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCEEE-EE-EcCCCCcEEEEEECCCCCEEEEEeC
Confidence 87643 33 3458889999999999999998864
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=219.75 Aligned_cols=187 Identities=19% Similarity=0.215 Sum_probs=155.8
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.|.+++|+|++ .|++|+.||+|++||+.+++... .......+|...|.+++|+|++++|++|+.|+.|++||+++++.
T Consensus 84 ~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~-~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~ 161 (344)
T 4gqb_B 84 GVADLTWVGER-GILVASDSGAVELWELDENETLI-VSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVV 161 (344)
T ss_dssp CEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCE-EEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CEEEEEEeCCC-eEEEEECCCEEEEEeccCCCcee-EeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 58999999985 68899999999999998875311 11233458999999999999999999999999999999999999
Q ss_pred eEEeccCCCcEEEEEecCCCC-EEEEeeCCCeEEEEeCCCCCceeEEec-----CCeEEEEecC-CCEEEEEcCCCcEEE
Q 039044 82 PVTVAMHDAPIKEVAWIPEMN-LLATGSWDKTLKYWDTRQPNPVHTQQL-----PDRCYALTVR-YPLMVVGTADRNLVV 154 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~vwd~~~~~~~~~~~~-----~~~~~~~~~~-~~~l~~~~~dg~v~~ 154 (194)
+..+.+|...|++++|+|++. +|++++.|++|++||++++++...+.. ...+++++|+ ++++++|+.||.|++
T Consensus 162 ~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~ 241 (344)
T 4gqb_B 162 LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSL 241 (344)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred EEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEE
Confidence 999999999999999999874 789999999999999999988776543 2357888885 578899999999999
Q ss_pred EECCCCCeeeEEeeCCCcceeeEEEEecCCC-eeEEEEe
Q 039044 155 FNLQNPQTEFKRINSPLKYQTRCVAAFPDQQ-GFLVCIH 192 (194)
Q Consensus 155 ~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~-~l~~~~~ 192 (194)
||+++++.. ..+ ..|...|++++|+|++. +|++|+.
T Consensus 242 wd~~~~~~~-~~~-~~h~~~v~~v~fsp~g~~~lasgs~ 278 (344)
T 4gqb_B 242 VDTKSTSCV-LSS-AVHSQCVTGLVFSPHSVPFLASLSE 278 (344)
T ss_dssp EESCC--CC-EEE-ECCSSCEEEEEECSSSSCCEEEEET
T ss_pred EECCCCcEE-EEE-cCCCCCEEEEEEccCCCeEEEEEeC
Confidence 999987643 333 45888999999999985 6777753
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.8e-37 Score=216.20 Aligned_cols=186 Identities=19% Similarity=0.310 Sum_probs=160.7
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
+.|++++|+|++++|++|+.||+|++||+.++. ....+..|..++.+++|+|++++|++|+.|+.|++||+++++
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~ 88 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV-----EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE 88 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-----EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCc-----eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc
Confidence 479999999999999999999999999998764 345667789999999999999999999999999999999999
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce-eEEe---cCCeEEEEec-CCCEEEEEcCCCcEEEE
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV-HTQQ---LPDRCYALTV-RYPLMVVGTADRNLVVF 155 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~-~~~~---~~~~~~~~~~-~~~~l~~~~~dg~v~~~ 155 (194)
.+..+.+|...|++++|+|++++|++++.|++|++||++++... ..+. ....+++|+| ++..+++|+.|+.|++|
T Consensus 89 ~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iw 168 (304)
T 2ynn_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168 (304)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEE
T ss_pred EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 99999999999999999999999999999999999999887543 3333 3457889999 67899999999999999
Q ss_pred ECCCCCeeeEEeeCCCcceeeEEEEec--CCCeeEEEEe
Q 039044 156 NLQNPQTEFKRINSPLKYQTRCVAAFP--DQQGFLVCIH 192 (194)
Q Consensus 156 d~~~~~~~~~~~~~~~~~~v~~i~~~p--~~~~l~~~~~ 192 (194)
|+++..... .....+...+..+.|+| ++.+|++|+.
T Consensus 169 d~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~l~s~s~ 206 (304)
T 2ynn_A 169 SLGQSTPNF-TLTTGQERGVNYVDYYPLPDKPYMITASD 206 (304)
T ss_dssp ETTCSSCSE-EEECCCTTCEEEEEECCSTTCCEEEEEET
T ss_pred ECCCCCccc-eeccCCcCcEEEEEEEEcCCCCEEEEEcC
Confidence 998766433 34445667789999987 6778888764
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=218.40 Aligned_cols=183 Identities=16% Similarity=0.223 Sum_probs=154.0
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCC-eEEEecCCCeEEEEecCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT-TVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~ 79 (194)
+.|++++|+|++++|++|+.|++|++||+.++. ....+.+|...|.+++|+|++. +|++++.|+.|++||++++
T Consensus 128 ~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~-----~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~ 202 (344)
T 4gqb_B 128 DIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV-----VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP 202 (344)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-----EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc-----EEEEEcCcCCceEEEEecCCCCCceeeecccccccccccccc
Confidence 368999999999999999999999999998874 3566778999999999999885 6889999999999999999
Q ss_pred CceEEec--cCCCcEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCCceeEEecC---CeEEEEecCC-CEEEEEcCCCcE
Q 039044 80 GQPVTVA--MHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVHTQQLP---DRCYALTVRY-PLMVVGTADRNL 152 (194)
Q Consensus 80 ~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~---~~~~~~~~~~-~~l~~~~~dg~v 152 (194)
+....+. .|...+.+++|+| ++++|++++.|+.|++||+++++++..+..+ +.+++|+|++ ++|++|+.|++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i 282 (344)
T 4gqb_B 203 KPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSL 282 (344)
T ss_dssp SCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred ceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeE
Confidence 8887764 4556799999999 4678899999999999999999988877654 4688999988 579999999999
Q ss_pred EEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeE-EEE
Q 039044 153 VVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFL-VCI 191 (194)
Q Consensus 153 ~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~-~~~ 191 (194)
++||+++++. . ...+|...|++++|+|+++.++ +|+
T Consensus 283 ~vwd~~~~~~-~--~~~~H~~~V~~v~~sp~~~~llas~s 319 (344)
T 4gqb_B 283 AVLDSSLSEL-F--RSQAHRDFVRDATWSPLNHSLLTTVG 319 (344)
T ss_dssp EEECTTCCEE-E--EECCCSSCEEEEEECSSSTTEEEEEE
T ss_pred EEEECCCCcE-E--EEcCCCCCEEEEEEeCCCCeEEEEEc
Confidence 9999988653 2 2356889999999999997655 554
No 6
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.6e-36 Score=211.86 Aligned_cols=186 Identities=23% Similarity=0.338 Sum_probs=166.0
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
++|++++|+|++++|++|+.|+.|++|++.++.. ...+.+|...|.+++|+|++++|++++.|+.|++||+++++
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~ 98 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-----EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK 98 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCccc-----chhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc
Confidence 3699999999999999999999999999987642 45567899999999999999999999999999999999999
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecCCCEEEEEcCCCcEEEEEC
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTADRNLVVFNL 157 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~dg~v~~~d~ 157 (194)
.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+.. +..+++++|+++++++++.||.|++||+
T Consensus 99 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 178 (312)
T 4ery_A 99 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 178 (312)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 9999999999999999999999999999999999999999988777654 3468899999999999999999999999
Q ss_pred CCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 158 QNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++.+. .......+...+..++|+|++++++++..
T Consensus 179 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 212 (312)
T 4ery_A 179 ASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAATL 212 (312)
T ss_dssp TTCCE-EEEECCSSCCCEEEEEECTTSSEEEEEET
T ss_pred CCCce-eeEEeccCCCceEEEEECCCCCEEEEEcC
Confidence 98764 33444456678999999999999998863
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9.6e-37 Score=216.61 Aligned_cols=184 Identities=22% Similarity=0.346 Sum_probs=163.3
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEec--CCCeEEEecCCCeEEEEecCCC
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD--DGTTVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~ 79 (194)
.|.+++|+|++..|++++.|++|++||+.++.. ...+.+|...+.+++|+| ++++|++|+.||.|++||++++
T Consensus 156 ~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~-----~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~ 230 (354)
T 2pbi_B 156 YLSACSFTNSDMQILTASGDGTCALWDVESGQL-----LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG 230 (354)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTCCE-----EEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTC
T ss_pred cEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeE-----EEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 578999999999999999999999999988743 456678999999999988 5689999999999999999999
Q ss_pred CceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec-----CCeEEEEecCCCEEEEEcCCCcEEE
Q 039044 80 GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL-----PDRCYALTVRYPLMVVGTADRNLVV 154 (194)
Q Consensus 80 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~dg~v~~ 154 (194)
+.+..+..|...|++++|+|++++|++++.|++|++||++..+.+..+.. ...+++|+|+++++++|+.|+.|++
T Consensus 231 ~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~v 310 (354)
T 2pbi_B 231 QCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINV 310 (354)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEE
Confidence 99999999999999999999999999999999999999998876655543 3468899999999999999999999
Q ss_pred EECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 155 FNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 155 ~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
||+++++.. .....|...|.+++|+|+|++|++|+.
T Consensus 311 wd~~~~~~~--~~l~~h~~~v~~l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 311 WDVLKGSRV--SILFGHENRVSTLRVSPDGTAFCSGSW 346 (354)
T ss_dssp EETTTCSEE--EEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred EECCCCceE--EEEECCCCcEEEEEECCCCCEEEEEcC
Confidence 999887643 233568899999999999999999874
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=8.4e-37 Score=220.76 Aligned_cols=176 Identities=19% Similarity=0.311 Sum_probs=159.1
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
++|++++|+|++++|++|+.|++|++||+.++.. ...+.+|...|.+++|+|++++|++|+.|+.|++||+.+++
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~-----~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~ 183 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDF-----ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE 183 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCC-----CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE-----EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 4799999999999999999999999999988743 56677899999999999999999999999999999999999
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecC---CeEEEEecCCCEEEEEcCCCcEEEEEC
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP---DRCYALTVRYPLMVVGTADRNLVVFNL 157 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~dg~v~~~d~ 157 (194)
.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++++..+..+ ...+.+++++.++++|+.|+.|++||+
T Consensus 184 ~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~ 263 (410)
T 1vyh_C 184 CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263 (410)
T ss_dssp EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 99999999999999999999999999999999999999999988777654 467889999999999999999999999
Q ss_pred CCCCeeeEEeeCCCcceeeEEEEecC
Q 039044 158 QNPQTEFKRINSPLKYQTRCVAAFPD 183 (194)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v~~i~~~p~ 183 (194)
++.+.. .....|...|.+++|+|+
T Consensus 264 ~~~~~~--~~~~~h~~~v~~~~~~~~ 287 (410)
T 1vyh_C 264 ATKECK--AELREHRHVVECISWAPE 287 (410)
T ss_dssp TTCCEE--EEECCCSSCEEEEEECCS
T ss_pred CCCcee--eEecCCCceEEEEEEcCc
Confidence 987643 233568889999999997
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=7.6e-37 Score=216.04 Aligned_cols=183 Identities=21% Similarity=0.306 Sum_probs=162.2
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.|.++.|+|++. +++++.|++|++||+.++. ....+.+|...|.+++|+|+++++++|+.|+.|++||++++..
T Consensus 145 ~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~-----~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~ 218 (340)
T 1got_B 145 YLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQ-----QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC 218 (340)
T ss_dssp CEEEEEEEETTE-EEEEETTSCEEEEETTTTE-----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE
T ss_pred cEEEEEECCCCc-EEEEECCCcEEEEECCCCc-----EEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCee
Confidence 578899998765 8899999999999998774 2456678999999999999999999999999999999999999
Q ss_pred eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec-----CCeEEEEecCCCEEEEEcCCCcEEEEE
Q 039044 82 PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL-----PDRCYALTVRYPLMVVGTADRNLVVFN 156 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~dg~v~~~d 156 (194)
+..+.+|...|++++|+|++++|++++.|+.|++||+++++.+..+.. ...+++|+|+++++++|+.||.|++||
T Consensus 219 ~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd 298 (340)
T 1got_B 219 RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWD 298 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEE
Confidence 999999999999999999999999999999999999998887766543 346889999999999999999999999
Q ss_pred CCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 157 LQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+.+.+.. . ...+|...|.+++|+|++++|++|+.
T Consensus 299 ~~~~~~~-~-~~~~h~~~v~~~~~s~dg~~l~s~s~ 332 (340)
T 1got_B 299 ALKADRA-G-VLAGHDNRVSCLGVTDDGMAVATGSW 332 (340)
T ss_dssp TTTCCEE-E-EEECCSSCEEEEEECTTSSCEEEEET
T ss_pred cccCcEe-e-EeecCCCcEEEEEEcCCCCEEEEEcC
Confidence 9887642 2 33468899999999999999999874
No 10
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=211.90 Aligned_cols=184 Identities=20% Similarity=0.280 Sum_probs=165.0
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
+|.+++|+|++.++++++.|++|++||+.++.. ......+...+.+++|+|++++|++|+.|+.|++|++++++.
T Consensus 82 ~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~-----~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~ 156 (321)
T 3ow8_A 82 GVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ-----IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK 156 (321)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-----EEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSE
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCCE-----EEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce
Confidence 689999999999999999999999999987742 445567788899999999999999999999999999999999
Q ss_pred eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecCCCEEEEEcCCCcEEEEECC
Q 039044 82 PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTADRNLVVFNLQ 158 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~dg~v~~~d~~ 158 (194)
...+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+.. +..+++|+|++++|++++.|+.|++||++
T Consensus 157 ~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~ 236 (321)
T 3ow8_A 157 EYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 236 (321)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETT
T ss_pred eEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECC
Confidence 888888999999999999999999999999999999999988877654 45789999999999999999999999999
Q ss_pred CCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 159 NPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 159 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+.+.. .....|...|.+++|+|++++|++++.
T Consensus 237 ~~~~~--~~~~~h~~~v~~~~~sp~~~~l~s~s~ 268 (321)
T 3ow8_A 237 HANLA--GTLSGHASWVLNVAFCPDDTHFVSSSS 268 (321)
T ss_dssp TCCEE--EEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred Cccee--EEEcCCCCceEEEEECCCCCEEEEEeC
Confidence 87642 334568889999999999999998864
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.6e-36 Score=211.30 Aligned_cols=184 Identities=18% Similarity=0.215 Sum_probs=158.5
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
+|.+++|+|++++|++|+.|++|++||+.++.. ...+.+|...|.+++|+|++++|++|+.|+.|++||++++..
T Consensus 57 ~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~ 131 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK-----VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA 131 (304)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE-----EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE
T ss_pred cEEEEEEeCCCCEEEEECCCCEEEEEECCCCcE-----EEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc
Confidence 688999999999999999999999999988743 456778999999999999999999999999999999988744
Q ss_pred -eEEeccCCCcEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCCceeEEec----CCeEEEEec--CCCEEEEEcCCCcEE
Q 039044 82 -PVTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVHTQQL----PDRCYALTV--RYPLMVVGTADRNLV 153 (194)
Q Consensus 82 -~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~----~~~~~~~~~--~~~~l~~~~~dg~v~ 153 (194)
...+.+|...|.+++|+| ++.+|++++.|+.|++||+++.++...... ....+.+.| +++++++++.|+.|+
T Consensus 132 ~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~ 211 (304)
T 2ynn_A 132 LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211 (304)
T ss_dssp EEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEE
T ss_pred hhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEE
Confidence 456789999999999999 678999999999999999998776655432 235667776 678999999999999
Q ss_pred EEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 154 VFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 154 ~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+||+++++. ... ...|...|.+++|+|+++.|++|+.
T Consensus 212 iWd~~~~~~-~~~-~~~h~~~v~~~~~~p~~~~l~s~s~ 248 (304)
T 2ynn_A 212 IWDYQTKSC-VAT-LEGHMSNVSFAVFHPTLPIIISGSE 248 (304)
T ss_dssp EEETTTTEE-EEE-EECCSSCEEEEEECSSSSEEEEEET
T ss_pred EEeCCCCcc-cee-eCCCCCCEEEEEECCCCCEEEEEcC
Confidence 999998764 233 3458889999999999999999864
No 12
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.2e-36 Score=217.76 Aligned_cols=185 Identities=20% Similarity=0.295 Sum_probs=164.3
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
++|++++|+|++++|++|+.|++|++||+.... ....+.+|...|.+++|+|++++|++|+.|+.|++||++++.
T Consensus 151 ~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~-----~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~ 225 (410)
T 1vyh_C 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQGFE-----CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY 225 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCCEEETTSSC-----EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc-----eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 468999999999999999999999999998764 245667899999999999999999999999999999999999
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecC------------------
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVR------------------ 139 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~------------------ 139 (194)
++..+.+|...|.+++|+|++.++++++.|+.|++||+++++....+.. ...+++|+|+
T Consensus 226 ~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (410)
T 1vyh_C 226 CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSG 305 (410)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-----
T ss_pred EEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccC
Confidence 9999999999999999999999999999999999999999887776654 3467888885
Q ss_pred --CCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 140 --YPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 140 --~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+.++++|+.|+.|++||++++... ..+ .+|...|++++|+|++++|++|+.
T Consensus 306 ~~g~~l~sgs~D~~i~iwd~~~~~~~-~~~-~~h~~~v~~v~~~~~g~~l~s~s~ 358 (410)
T 1vyh_C 306 KPGPFLLSGSRDKTIKMWDVSTGMCL-MTL-VGHDNWVRGVLFHSGGKFILSCAD 358 (410)
T ss_dssp --CCEEEEEETTSEEEEEETTTTEEE-EEE-ECCSSCEEEEEECSSSSCEEEEET
T ss_pred CCCCEEEEEeCCCeEEEEECCCCceE-EEE-ECCCCcEEEEEEcCCCCEEEEEeC
Confidence 678999999999999999987643 333 458889999999999999999864
No 13
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.2e-36 Score=207.78 Aligned_cols=189 Identities=17% Similarity=0.213 Sum_probs=155.4
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEec--CCCeEEEecCCCeEEEEecCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD--DGTTVFSGGCDKQVKMWPLLS 78 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~~~d~~~ 78 (194)
+.|++++|+|++++|++|+.|++|++|++..... .....+.+|..+|.+++|+| ++++|++|+.|+.|++||+++
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~---~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH---KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN 86 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB---CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc---EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC
Confidence 4799999999999999999999999999975421 23456778999999999986 489999999999999999988
Q ss_pred CC--ceEEeccCCCcEEEEEecCC--CCEEEEeeCCCeEEEEeCCCCCc--eeEE---ecCCeEEEEecC----------
Q 039044 79 GG--QPVTVAMHDAPIKEVAWIPE--MNLLATGSWDKTLKYWDTRQPNP--VHTQ---QLPDRCYALTVR---------- 139 (194)
Q Consensus 79 ~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~vwd~~~~~~--~~~~---~~~~~~~~~~~~---------- 139 (194)
++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||+++... ...+ .....+++|+|+
T Consensus 87 ~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~ 166 (297)
T 2pm7_B 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 166 (297)
T ss_dssp SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---------
T ss_pred CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCC
Confidence 74 55667889999999999997 88999999999999999987642 2222 234567888886
Q ss_pred ---CCEEEEEcCCCcEEEEECCCCCee--eEEeeCCCcceeeEEEEecCC---CeeEEEEe
Q 039044 140 ---YPLMVVGTADRNLVVFNLQNPQTE--FKRINSPLKYQTRCVAAFPDQ---QGFLVCIH 192 (194)
Q Consensus 140 ---~~~l~~~~~dg~v~~~d~~~~~~~--~~~~~~~~~~~v~~i~~~p~~---~~l~~~~~ 192 (194)
+++|++|+.|+.|++||+++.+.. .......|...|.+++|+|++ .+|++++.
T Consensus 167 ~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~ 227 (297)
T 2pm7_B 167 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQ 227 (297)
T ss_dssp ---CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred CCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEEC
Confidence 579999999999999999876532 223345688999999999995 78888763
No 14
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.1e-35 Score=211.12 Aligned_cols=192 Identities=15% Similarity=0.205 Sum_probs=159.7
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCccc-------------------------------------------c
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGV-------------------------------------------A 37 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~-------------------------------------------~ 37 (194)
++|++++|+|++++|++|+.|++|++||..+..... .
T Consensus 65 ~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~ 144 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMA 144 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSG
T ss_pred CeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccccccc
Confidence 468999999999999999999999999975543100 0
Q ss_pred cccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCceEEeccCCCcEEEEEecC--CCCEEEEeeCCCeEEE
Q 039044 38 SVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIP--EMNLLATGSWDKTLKY 115 (194)
Q Consensus 38 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~v 115 (194)
........|...|.+++|+|+++.|++++.|+.|++||+++++.+..+.+|...|.+++|+| ++++|++++.|+.|++
T Consensus 145 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~ 224 (354)
T 2pbi_B 145 AKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMV 224 (354)
T ss_dssp GGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEE
T ss_pred ccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEE
Confidence 11223345888999999999999999999999999999999999999999999999999988 5689999999999999
Q ss_pred EeCCCCCceeEEec---CCeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 116 WDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 116 wd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
||+++++++..+.. ...+++|+|++..+++++.|++|++||++..+.........+...+.+++|+|+++++++|..
T Consensus 225 wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~ 304 (354)
T 2pbi_B 225 WDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYN 304 (354)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEEC
Confidence 99999998877654 356889999999999999999999999998754322222233456899999999999999864
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.8e-36 Score=209.84 Aligned_cols=189 Identities=20% Similarity=0.240 Sum_probs=159.8
Q ss_pred CCeeeEEEcCCC-CEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCC
Q 039044 1 DSVSSLCFSPKA-NILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 1 ~~v~~~~~~p~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 79 (194)
++|++++|+|++ ++|++|+.|++|++|++.............+.+|...|.+++|+|++++|++|+.|+.|++||++++
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~ 97 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATG 97 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 479999999965 8999999999999999976433222234567789999999999999999999999999999999999
Q ss_pred CceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecC------CCEEEEEcCCC
Q 039044 80 GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVR------YPLMVVGTADR 150 (194)
Q Consensus 80 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~------~~~l~~~~~dg 150 (194)
+.+..+.+|...|.+++|+|++.+|++++.|++|++||++. +.+..+.. ....+.+.|. +..+++++.|+
T Consensus 98 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~ 176 (319)
T 3frx_A 98 ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDK 176 (319)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC------CCEEEEEETTS
T ss_pred CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCC
Confidence 99999999999999999999999999999999999999974 44444433 3456777774 45899999999
Q ss_pred cEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 151 NLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 151 ~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
.|++||+++.+.. .....|...|.+++|+|++++|++|+.
T Consensus 177 ~i~~wd~~~~~~~--~~~~~h~~~v~~~~~sp~g~~l~s~~~ 216 (319)
T 3frx_A 177 MVKAWNLNQFQIE--ADFIGHNSNINTLTASPDGTLIASAGK 216 (319)
T ss_dssp CEEEEETTTTEEE--EEECCCCSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEECCcchhh--eeecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 9999999986532 334568899999999999999999864
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.5e-35 Score=209.42 Aligned_cols=189 Identities=17% Similarity=0.275 Sum_probs=161.9
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.|.+++|+|++++|++|+.|+.+++|++...... ........+|...+.++.|++++. +++++.|+.|++||+++++.
T Consensus 99 ~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~ 176 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN-VRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQ 176 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS-CEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEE
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc-ceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcE
Confidence 5889999999999999999999999999765321 122345668999999999998765 88999999999999999999
Q ss_pred eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecCCCEEEEEcCCCcEEEEECC
Q 039044 82 PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTADRNLVVFNLQ 158 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~dg~v~~~d~~ 158 (194)
+..+.+|...|.+++|+|+++++++++.|+.|++||+++++....+.. ...+++|+|+++++++|+.||.|++||++
T Consensus 177 ~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~ 256 (340)
T 1got_B 177 TTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence 999999999999999999999999999999999999999988877654 35688999999999999999999999999
Q ss_pred CCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 159 NPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 159 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+.+.........+...+.+++|+|+|+++++|..
T Consensus 257 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~ 290 (340)
T 1got_B 257 ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD 290 (340)
T ss_dssp TTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCcEEEEEccCCcccceEEEEECCCCCEEEEECC
Confidence 8764333222233457999999999999999864
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.1e-35 Score=205.04 Aligned_cols=182 Identities=17% Similarity=0.292 Sum_probs=158.0
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
+.|.+++|+|++++|++|+.|++|++||+.+++ ....+.+|...|.+++|+|++++|++|+.|+.|++||++ ++
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~-----~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~ 139 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASWDKTLRLWDVATGE-----TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQ 139 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTE-----EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SC
T ss_pred ccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC-----eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CC
Confidence 368999999999999999999999999998874 355677899999999999999999999999999999986 46
Q ss_pred ceEEeccCCCcEEEEEecCC------CCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecCCCEEEEEcCCCc
Q 039044 81 QPVTVAMHDAPIKEVAWIPE------MNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTADRN 151 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~dg~ 151 (194)
.+..+.+|...|.+++|.|. +..+++++.|+.|++||+++.+....+.. ...+++++|++++|++++.||.
T Consensus 140 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~ 219 (319)
T 3frx_A 140 CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGE 219 (319)
T ss_dssp EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCE
T ss_pred eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 77788899999999999984 44899999999999999998877666544 4578999999999999999999
Q ss_pred EEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 152 LVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 152 v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
|++||+++.+.. .... ....+.+++|+|++..++++.
T Consensus 220 i~iwd~~~~~~~-~~~~--~~~~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 220 IMLWNLAAKKAM-YTLS--AQDEVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp EEEEETTTTEEE-EEEE--CCSCEEEEEECSSSSEEEEEE
T ss_pred EEEEECCCCcEE-EEec--CCCcEEEEEEcCCCCEEEEEc
Confidence 999999987643 3332 346799999999999998875
No 18
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.1e-35 Score=213.07 Aligned_cols=191 Identities=19% Similarity=0.295 Sum_probs=159.8
Q ss_pred CeeeEEEcCC-CCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEec-CCCeEEEecCCCeEEEEecC-C
Q 039044 2 SVSSLCFSPK-ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD-DGTTVFSGGCDKQVKMWPLL-S 78 (194)
Q Consensus 2 ~v~~~~~~p~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~~~d~~-~ 78 (194)
.|.++.|.|+ +..|++|+.|++|++||+.++............+|...+.+++|+| ++++|++|+.|+.|++||++ .
T Consensus 159 ~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~ 238 (380)
T 3iz6_a 159 YASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRIT 238 (380)
T ss_dssp CCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTT
T ss_pred ceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCC
Confidence 4678899996 4679999999999999998875311111122257899999999987 88999999999999999998 4
Q ss_pred CCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecC----------CeEEEEecCCCEEEEEcC
Q 039044 79 GGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP----------DRCYALTVRYPLMVVGTA 148 (194)
Q Consensus 79 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~----------~~~~~~~~~~~~l~~~~~ 148 (194)
++.+..+.+|...|++++|+|++++|++++.|++|++||+++++.+..+... ..+++|+|+++++++|+.
T Consensus 239 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~ 318 (380)
T 3iz6_a 239 SRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS 318 (380)
T ss_dssp CCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT
T ss_pred CcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC
Confidence 5677888999999999999999999999999999999999998877665431 468999999999999999
Q ss_pred CCcEEEEECCCCCeeeEE--eeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 149 DRNLVVFNLQNPQTEFKR--INSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 149 dg~v~~~d~~~~~~~~~~--~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
||.|++||+...+..... ....|...|.+++|+|+|++|++|+.
T Consensus 319 dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 319 NGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW 364 (380)
T ss_dssp TSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT
T ss_pred CCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC
Confidence 999999999887643322 22568899999999999999999864
No 19
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.5e-35 Score=207.72 Aligned_cols=189 Identities=17% Similarity=0.232 Sum_probs=156.1
Q ss_pred CCeeeEEE-----cC-CCCEEEEeeCCCeEEEEecccCCcc--cccccccccCCCCCeeEEEEecCCCeEEEecCCCeEE
Q 039044 1 DSVSSLCF-----SP-KANILVATSWDNQVRCWEISRGGTG--VASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVK 72 (194)
Q Consensus 1 ~~v~~~~~-----~p-~~~~l~~~~~d~~i~i~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~ 72 (194)
+.|++++| +| ++++|++|+.|++|++||+...... .......+.+|...|.+++|+|++.++++|+.|+.|+
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~ 101 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLR 101 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEE
T ss_pred hhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEE
Confidence 46899999 76 8999999999999999999764321 1122345678999999999999999999999999999
Q ss_pred EEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeE-----EecCCeEEEEecCC-------
Q 039044 73 MWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT-----QQLPDRCYALTVRY------- 140 (194)
Q Consensus 73 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~-----~~~~~~~~~~~~~~------- 140 (194)
+||+++++.+..+.+|...|.+++|+|++++|++++.|+.|++||++....... +.....+++++|++
T Consensus 102 lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 181 (343)
T 2xzm_R 102 LWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQ 181 (343)
T ss_dssp EEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCC
T ss_pred EEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccC
Confidence 999999999999999999999999999999999999999999999984322211 12234688888876
Q ss_pred ---CEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 141 ---PLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 141 ---~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
.++++++.||.|++||.+. + . ......|...|.+++|+|+|++|++|+.
T Consensus 182 ~~~~~l~s~~~d~~i~iwd~~~-~-~-~~~~~~h~~~v~~~~~s~~g~~l~sgs~ 233 (343)
T 2xzm_R 182 PFAPYFASVGWDGRLKVWNTNF-Q-I-RYTFKAHESNVNHLSISPNGKYIATGGK 233 (343)
T ss_dssp SSCCEEEEEETTSEEEEEETTT-E-E-EEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCCEEEEEcCCCEEEEEcCCC-c-e-eEEEcCccccceEEEECCCCCEEEEEcC
Confidence 7899999999999999542 2 2 2233457889999999999999999864
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=209.42 Aligned_cols=189 Identities=19% Similarity=0.270 Sum_probs=156.7
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
+.|.+++|+|++++|++|+.|+++++|++..... .....+.+|..+|.+++|+|++++|++|+.|+.|++||++.+.
T Consensus 62 ~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~---~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~ 138 (345)
T 3fm0_A 62 RTVRKVAWSPCGNYLASASFDATTCIWKKNQDDF---ECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED 138 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEECCC-E---EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS
T ss_pred CcEEEEEECCCCCEEEEEECCCcEEEEEccCCCe---EEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC
Confidence 3689999999999999999999999999876542 2345567899999999999999999999999999999998765
Q ss_pred c---eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce--eEEe---cCCeEEEEecCCCEEEEEcCCCcE
Q 039044 81 Q---PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV--HTQQ---LPDRCYALTVRYPLMVVGTADRNL 152 (194)
Q Consensus 81 ~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~--~~~~---~~~~~~~~~~~~~~l~~~~~dg~v 152 (194)
. +..+..|...|.+++|+|++++|++++.|+.|++||.+.++.. ..+. ....+++|+|++++|++++.|++|
T Consensus 139 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v 218 (345)
T 3fm0_A 139 EYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTV 218 (345)
T ss_dssp CEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeE
Confidence 3 4567789999999999999999999999999999999876533 3333 345789999999999999999999
Q ss_pred EEEECCCCCe--------------eeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 153 VVFNLQNPQT--------------EFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 153 ~~~d~~~~~~--------------~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++||...... ........|...|.+++|+|++..|++++.
T Consensus 219 ~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~ 272 (345)
T 3fm0_A 219 RIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACG 272 (345)
T ss_dssp EEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEET
T ss_pred EEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeC
Confidence 9999743221 112233347788999999999999998763
No 21
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-35 Score=205.23 Aligned_cols=186 Identities=16% Similarity=0.202 Sum_probs=146.8
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccc-c-CCCCCeeEEEEecCCCeEEEecCCCeEEEEecCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKAS-I-SHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLS 78 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 78 (194)
++|++++|+|+ +|++|+.|++|++|++..... .....+ . .|...|.+++|+|++++|++|+.|+.|++||++.
T Consensus 15 ~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~---~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~ 89 (330)
T 2hes_X 15 EKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF---TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEE 89 (330)
T ss_dssp SCEEEEEEETT--EEEEEESSSCEEEEECSSSCC---EEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC--
T ss_pred CceeeeccCCC--EEEEEcCCCEEEEEEecCCCe---EEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEccc
Confidence 46899999987 999999999999999976532 112222 3 3999999999999999999999999999999853
Q ss_pred C-------CceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCC----CceeEEe---cCCeEEEEecCCCEEE
Q 039044 79 G-------GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP----NPVHTQQ---LPDRCYALTVRYPLMV 144 (194)
Q Consensus 79 ~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~----~~~~~~~---~~~~~~~~~~~~~~l~ 144 (194)
. +.+..+.+|...|.+++|+|++++|++++.|++|++||++.. +.+..+. ....+++|+|++++|+
T Consensus 90 ~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 169 (330)
T 2hes_X 90 SADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLA 169 (330)
T ss_dssp -----CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEE
T ss_pred CcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEE
Confidence 2 345567899999999999999999999999999999999543 2333443 3457889999999999
Q ss_pred EEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecC--CCeeEEEE
Q 039044 145 VGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPD--QQGFLVCI 191 (194)
Q Consensus 145 ~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~--~~~l~~~~ 191 (194)
+++.|++|++||.++..........+|...|.+++|+|+ +..|++|+
T Consensus 170 s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s 218 (330)
T 2hes_X 170 SSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS 218 (330)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEE
T ss_pred EEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEe
Confidence 999999999999987643333445678899999999999 66777775
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.3e-35 Score=220.40 Aligned_cols=192 Identities=12% Similarity=0.127 Sum_probs=159.0
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccc-----------------------------------------cc
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVA-----------------------------------------SV 39 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~-----------------------------------------~~ 39 (194)
+.|++++|+|++++||+|+.|++|+|||+........ ..
T Consensus 60 ~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~ 139 (611)
T 1nr0_A 60 HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS 139 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCB
T ss_pred CceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCC
Confidence 3689999999999999999999999999854321000 00
Q ss_pred cccccCCCCCeeEEEEecCCC-eEEEecCCCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeC
Q 039044 40 PKASISHDHPVLCSTWKDDGT-TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDT 118 (194)
Q Consensus 40 ~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~ 118 (194)
...+.+|...|.+++|+|++. .|++|+.|+.|++||...++....+.+|...|++++|+|++++|++++.|++|++||+
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~ 219 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNG 219 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEEC
Confidence 112356888899999999886 5999999999999999888888889999999999999999999999999999999999
Q ss_pred CCCCceeEEe----------cCCeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeE-----------------------
Q 039044 119 RQPNPVHTQQ----------LPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFK----------------------- 165 (194)
Q Consensus 119 ~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~----------------------- 165 (194)
++++.+..+. ....+++|+|++++|++++.|++|++||+++++....
T Consensus 220 ~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 299 (611)
T 1nr0_A 220 VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVS 299 (611)
T ss_dssp TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEE
T ss_pred CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEE
Confidence 9888776652 2346889999999999999999999999987643211
Q ss_pred ------------------EeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 166 ------------------RINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 166 ------------------~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
....+|...|.+++|+|+|++|++++.
T Consensus 300 ~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~ 344 (611)
T 1nr0_A 300 ISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADA 344 (611)
T ss_dssp EETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeC
Confidence 122457788999999999999999863
No 23
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.2e-35 Score=209.03 Aligned_cols=184 Identities=20% Similarity=0.284 Sum_probs=157.1
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCC-eEEEecCCCeEEEEecCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT-TVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~ 79 (194)
+.|++++|+|++++|++|+.|++|++||+.++. ....+..|...|.+++|+|++. ++++++.|+.|++||++++
T Consensus 140 ~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~-----~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~ 214 (357)
T 4g56_B 140 DIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA-----VLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKP 214 (357)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEETTTTE-----EEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSS
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc-----EEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCC
Confidence 368999999999999999999999999998774 3556678999999999999875 7899999999999999998
Q ss_pred CceEEe--ccCCCcEEEEEecCC-CCEEEEeeCCCeEEEEeCCCCCceeEEecC---CeEEEEecCC-CEEEEEcCCCcE
Q 039044 80 GQPVTV--AMHDAPIKEVAWIPE-MNLLATGSWDKTLKYWDTRQPNPVHTQQLP---DRCYALTVRY-PLMVVGTADRNL 152 (194)
Q Consensus 80 ~~~~~~--~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~---~~~~~~~~~~-~~l~~~~~dg~v 152 (194)
+....+ ..|...+.+++|+|+ +.+|++++.|+.|++||+++++.+..+..+ ..+++|+|++ ++|++|+.|++|
T Consensus 215 ~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i 294 (357)
T 4g56_B 215 KPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTV 294 (357)
T ss_dssp SCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred ceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEE
Confidence 876544 456778999999996 568899999999999999999888777653 4688999987 579999999999
Q ss_pred EEEECCCCCeeeEEeeCCCcceeeEEEEec-CCCeeEEEEe
Q 039044 153 VVFNLQNPQTEFKRINSPLKYQTRCVAAFP-DQQGFLVCIH 192 (194)
Q Consensus 153 ~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p-~~~~l~~~~~ 192 (194)
+|||+++++. .. ...|...|++++|+| ++++|++|+.
T Consensus 295 ~iwd~~~~~~-~~--~~~H~~~V~~vafsP~d~~~l~s~s~ 332 (357)
T 4g56_B 295 AVLDADFSEV-FR--DLSHRDFVTGVAWSPLDHSKFTTVGW 332 (357)
T ss_dssp EEECTTSCEE-EE--ECCCSSCEEEEEECSSSTTEEEEEET
T ss_pred EEEECCCCcE-eE--ECCCCCCEEEEEEeCCCCCEEEEEcC
Confidence 9999988653 22 236889999999999 7889988863
No 24
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.5e-35 Score=209.00 Aligned_cols=191 Identities=18% Similarity=0.243 Sum_probs=156.3
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccc-------------cccCCCCCeeEEEEecCCCeEEEecC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPK-------------ASISHDHPVLCSTWKDDGTTVFSGGC 67 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-------------~~~~~~~~i~~~~~~~~~~~l~~~~~ 67 (194)
+.|.+++|+|++++|++|+ ++.+++|++.++......... ....+...|.+++|+|++++|++|+.
T Consensus 65 ~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~ 143 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAE 143 (393)
T ss_dssp SCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEET
T ss_pred CEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcC
Confidence 3689999999999999987 689999999876431100000 00012335899999999999999999
Q ss_pred CCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec--CCeEEEEec-CCCEEE
Q 039044 68 DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL--PDRCYALTV-RYPLMV 144 (194)
Q Consensus 68 d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~--~~~~~~~~~-~~~~l~ 144 (194)
|+.|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||+++++....+.. ....++++| ++++++
T Consensus 144 d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 223 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIA 223 (393)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEE
T ss_pred CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEE
Confidence 99999999999988889999999999999999999999999999999999999887766554 346788998 899999
Q ss_pred EEcCCCcEEEEECCCCCeeeEE-----eeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 145 VGTADRNLVVFNLQNPQTEFKR-----INSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 145 ~~~~dg~v~~~d~~~~~~~~~~-----~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+|+.||.|++||+++++..... ....|...|.+++|+|++++|++|+.
T Consensus 224 ~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~ 276 (393)
T 1erj_A 224 AGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL 276 (393)
T ss_dssp EEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC
Confidence 9999999999999987643221 11457889999999999999999863
No 25
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-35 Score=205.58 Aligned_cols=190 Identities=19% Similarity=0.253 Sum_probs=146.2
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcc--cccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTG--VASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLS 78 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 78 (194)
++|++++|+|++++|++|+.|++|++|++...... .......+.+|...|.+++|+|++++|++|+.|+.|++||++.
T Consensus 59 ~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~ 138 (330)
T 2hes_X 59 KAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDE 138 (330)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCT
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccC
Confidence 36899999999999999999999999998643210 1122345678999999999999999999999999999999953
Q ss_pred C----CceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCC--CceeEEec---CCeEEEEecC--CCEEEEEc
Q 039044 79 G----GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP--NPVHTQQL---PDRCYALTVR--YPLMVVGT 147 (194)
Q Consensus 79 ~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~--~~~~~~~~---~~~~~~~~~~--~~~l~~~~ 147 (194)
. +.+..+..|...|.+++|+|++++|++++.|++|++||.+++ +++..+.. ...+++|+|+ +..+++++
T Consensus 139 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s 218 (330)
T 2hes_X 139 SGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS 218 (330)
T ss_dssp TCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEE
T ss_pred CCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEe
Confidence 3 345677899999999999999999999999999999998765 44555543 3467889998 67899999
Q ss_pred CCCcEEEEECCCCC-------eeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 148 ADRNLVVFNLQNPQ-------TEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 148 ~dg~v~~~d~~~~~-------~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
.|++|++||++... .....+...|...|.+++|+|++ .|+++.
T Consensus 219 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~ 268 (330)
T 2hes_X 219 DDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVG 268 (330)
T ss_dssp TTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEE
T ss_pred CCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEe
Confidence 99999999987542 11222223478899999999776 566654
No 26
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.4e-34 Score=198.99 Aligned_cols=189 Identities=18% Similarity=0.252 Sum_probs=153.6
Q ss_pred CCeeeEEEcCC--CCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecC--CCeEEEecCCCeEEEEec
Q 039044 1 DSVSSLCFSPK--ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDD--GTTVFSGGCDKQVKMWPL 76 (194)
Q Consensus 1 ~~v~~~~~~p~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~~~d~ 76 (194)
++|++++|+|+ +++|++|+.|++|++||+..+.. ........|...|.+++|+|+ +++|++++.|+.|++||+
T Consensus 54 ~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~---~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~ 130 (297)
T 2pm7_B 54 GPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRW---SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEF 130 (297)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCB---CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEB
T ss_pred CCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCce---EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEe
Confidence 46899999864 89999999999999999987532 123445678999999999997 889999999999999999
Q ss_pred CCCCc--eEEeccCCCcEEEEEecCC-------------CCEEEEeeCCCeEEEEeCCCCC----ceeEEec---CCeEE
Q 039044 77 LSGGQ--PVTVAMHDAPIKEVAWIPE-------------MNLLATGSWDKTLKYWDTRQPN----PVHTQQL---PDRCY 134 (194)
Q Consensus 77 ~~~~~--~~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~d~~v~vwd~~~~~----~~~~~~~---~~~~~ 134 (194)
+++.. ...+.+|...|.+++|+|+ +++|++++.|+.|++||+++++ ....+.. .+.++
T Consensus 131 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v 210 (297)
T 2pm7_B 131 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 210 (297)
T ss_dssp CSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred cCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEE
Confidence 87642 4567789999999999996 5799999999999999998766 3334433 35789
Q ss_pred EEecCC---CEEEEEcCCCcEEEEECCCCCeeeE-Eee--CCCcceeeEEEEecCCCeeEEEEe
Q 039044 135 ALTVRY---PLMVVGTADRNLVVFNLQNPQTEFK-RIN--SPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 135 ~~~~~~---~~l~~~~~dg~v~~~d~~~~~~~~~-~~~--~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+|+|++ .+|++++.|++|++||+++...+.. ... ..+...+.+++|+|++++|+++..
T Consensus 211 ~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~ 274 (297)
T 2pm7_B 211 AWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (297)
T ss_dssp EECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET
T ss_pred EECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC
Confidence 999984 7999999999999999987542211 122 356788999999999999998864
No 27
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.6e-35 Score=219.95 Aligned_cols=191 Identities=17% Similarity=0.238 Sum_probs=152.5
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCccccc--ccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVAS--VPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLS 78 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 78 (194)
+.|++++|+|++++|++|+.|++|++||+.++...... ......+|...|.+++|+|++++|++++.|+.|++||+++
T Consensus 191 ~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 191 KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 36899999999999999999999999998776431100 0011127999999999999999999999999999999987
Q ss_pred CCceE-------------------------------------------EeccCCCcEEEEEecCCCCEEEEeeCCCeEEE
Q 039044 79 GGQPV-------------------------------------------TVAMHDAPIKEVAWIPEMNLLATGSWDKTLKY 115 (194)
Q Consensus 79 ~~~~~-------------------------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v 115 (194)
++.+. .+.+|...|++++|+|++++|++++.|+.|++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~ 350 (611)
T 1nr0_A 271 LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINS 350 (611)
T ss_dssp TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEE
Confidence 65432 33578899999999999999999999999999
Q ss_pred EeCCCCCceeEE--------------------------------------------------------------------
Q 039044 116 WDTRQPNPVHTQ-------------------------------------------------------------------- 127 (194)
Q Consensus 116 wd~~~~~~~~~~-------------------------------------------------------------------- 127 (194)
||+++++.....
T Consensus 351 Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~ 430 (611)
T 1nr0_A 351 WDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC 430 (611)
T ss_dssp EETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEE
T ss_pred EECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEe
Confidence 998765432110
Q ss_pred -----------------ecCCeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 128 -----------------QLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 128 -----------------~~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
.....+++++|+++++++|+.|+.|++||+.+........ ..|...|.+++|+|+|++|+++
T Consensus 431 ~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~ 509 (611)
T 1nr0_A 431 YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVAT 509 (611)
T ss_dssp SSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEE
T ss_pred CceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEE
Confidence 0112467899999999999999999999998754322222 4578899999999999999998
Q ss_pred Ee
Q 039044 191 IH 192 (194)
Q Consensus 191 ~~ 192 (194)
+.
T Consensus 510 s~ 511 (611)
T 1nr0_A 510 DQ 511 (611)
T ss_dssp ET
T ss_pred cC
Confidence 64
No 28
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-34 Score=207.40 Aligned_cols=184 Identities=23% Similarity=0.380 Sum_probs=155.7
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCce
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQP 82 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 82 (194)
|++++|+|++++|++|+.|+.|++||+.+.. ....+.+|...|.+++|+|++++|++++.|+.|++||+++++..
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~-----~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRK-----IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTE-----EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCc-----EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE
Confidence 8899999999999999999999999998763 34566789999999999999999999999999999999998877
Q ss_pred EEeccCCCcEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCCceeEEe----------cCCeEEEEecCCCEEEEEcCCCc
Q 039044 83 VTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVHTQQ----------LPDRCYALTVRYPLMVVGTADRN 151 (194)
Q Consensus 83 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~vwd~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~dg~ 151 (194)
..+. +...+.+++|+| ++++|++++.|+.|++||+++++.+..+. ....+++|+|++++|++|+.|+.
T Consensus 201 ~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~ 279 (393)
T 1erj_A 201 LTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 279 (393)
T ss_dssp EEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 7665 667899999999 89999999999999999999988766542 23468899999999999999999
Q ss_pred EEEEECCCCCee----------eEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 152 LVVFNLQNPQTE----------FKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 152 v~~~d~~~~~~~----------~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
|++||+++.... ......+|...|.+++|+|++++|++|+.
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~ 330 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK 330 (393)
T ss_dssp EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEET
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeC
Confidence 999999864321 11223457788999999999999998864
No 29
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=9.4e-36 Score=208.53 Aligned_cols=189 Identities=19% Similarity=0.258 Sum_probs=153.4
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEec--CCCeEEEecCCCeEEEEecCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD--DGTTVFSGGCDKQVKMWPLLS 78 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~~~d~~~ 78 (194)
++|++++|+|++++|++|+.|++|++||+..+.. .....+.+|..+|.+++|+| ++++|++|+.|+.|++||+++
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~---~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~ 90 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ---ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN 90 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE---EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS
T ss_pred CeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc---EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC
Confidence 4799999999999999999999999999987532 22345678999999999986 489999999999999999988
Q ss_pred CC--ceEEeccCCCcEEEEEecCC--CCEEEEeeCCCeEEEEeCCCCCce---eE---EecCCeEEEEecC---------
Q 039044 79 GG--QPVTVAMHDAPIKEVAWIPE--MNLLATGSWDKTLKYWDTRQPNPV---HT---QQLPDRCYALTVR--------- 139 (194)
Q Consensus 79 ~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~vwd~~~~~~~---~~---~~~~~~~~~~~~~--------- 139 (194)
++ ....+.+|...|++++|+|+ +.+|++++.|+.|++||++..... .. +.....+++|+|+
T Consensus 91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 170 (316)
T 3bg1_A 91 GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDH 170 (316)
T ss_dssp SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------
T ss_pred CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccc
Confidence 74 45567889999999999997 789999999999999999876422 11 1223457788886
Q ss_pred --------CCEEEEEcCCCcEEEEECCCCCe-eeEEeeCCCcceeeEEEEecCC----CeeEEEEe
Q 039044 140 --------YPLMVVGTADRNLVVFNLQNPQT-EFKRINSPLKYQTRCVAAFPDQ----QGFLVCIH 192 (194)
Q Consensus 140 --------~~~l~~~~~dg~v~~~d~~~~~~-~~~~~~~~~~~~v~~i~~~p~~----~~l~~~~~ 192 (194)
+++|++|+.|+.|++||++.... ........|...|++++|+|++ ..|++|+.
T Consensus 171 ~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~ 236 (316)
T 3bg1_A 171 PSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQ 236 (316)
T ss_dssp CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEET
T ss_pred ccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcC
Confidence 46899999999999999975431 1223345688899999999987 77888763
No 30
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2e-34 Score=207.78 Aligned_cols=191 Identities=19% Similarity=0.331 Sum_probs=163.9
Q ss_pred CCeeeEEEcC-CCCEEEEeeCCCeEEEEecccCCccc--ccccccccCCCCCeeEEEEecCC-CeEEEecCCCeEEEEec
Q 039044 1 DSVSSLCFSP-KANILVATSWDNQVRCWEISRGGTGV--ASVPKASISHDHPVLCSTWKDDG-TTVFSGGCDKQVKMWPL 76 (194)
Q Consensus 1 ~~v~~~~~~p-~~~~l~~~~~d~~i~i~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~~~d~ 76 (194)
++|++++|+| ++++|++|+.||+|++|++....... ......+.+|...|.+++|+|++ ++|++++.|+.|++||+
T Consensus 82 ~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 161 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDV 161 (402)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEET
T ss_pred CCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEEC
Confidence 4689999999 89999999999999999998763210 02245567899999999999998 69999999999999999
Q ss_pred CCCCceEEe--ccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEE-ecC----CeEEEEecCCCEEEEE---
Q 039044 77 LSGGQPVTV--AMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ-QLP----DRCYALTVRYPLMVVG--- 146 (194)
Q Consensus 77 ~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~-~~~----~~~~~~~~~~~~l~~~--- 146 (194)
++++.+..+ ..|...|.+++|+|++++|++++.|+.|++||+++++.+..+ ..+ ...+.|+|+++++++|
T Consensus 162 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~ 241 (402)
T 2aq5_A 162 GTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSR 241 (402)
T ss_dssp TTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECT
T ss_pred CCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccC
Confidence 999988888 789999999999999999999999999999999999888776 332 4678999999999999
Q ss_pred cCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 147 TADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 147 ~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
+.|+.|++||+++.+.+.......+...+.+++|+|+++.++++.
T Consensus 242 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g 286 (402)
T 2aq5_A 242 MSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCG 286 (402)
T ss_dssp TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEE
T ss_pred CCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEE
Confidence 789999999999877544445545677899999999999997543
No 31
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.4e-35 Score=210.71 Aligned_cols=188 Identities=18% Similarity=0.215 Sum_probs=150.7
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
++|++++|+|++++|++|+.|+.|++|++..... .....+.+|...|.+++|+|++++|++++.|+.|++||+++++
T Consensus 12 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~---~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 12 KPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGW---KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp SCCSCCEECSSSSEEECCCSSSCBCEEEEETTEE---EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred CcEEEEEECCCCCEEEEecCCCEEEEEEccCCce---EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 4689999999999999999999999999987621 2345667899999999999999999999999999999999877
Q ss_pred ---ceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc---eeEEec----CCeEEEEecCCCEEEEEcCCC
Q 039044 81 ---QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP---VHTQQL----PDRCYALTVRYPLMVVGTADR 150 (194)
Q Consensus 81 ---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~---~~~~~~----~~~~~~~~~~~~~l~~~~~dg 150 (194)
....+..|...|.+++|+|++++|++++.|+.|++||+++++. ...+.. ...+++|+|+++++++++.|+
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 168 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR 168 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC
Confidence 5667788999999999999999999999999999999998763 444433 457899999999999999999
Q ss_pred cEEEEECCCCC----------------eeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 151 NLVVFNLQNPQ----------------TEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 151 ~v~~~d~~~~~----------------~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
.|++||++... ....... .|...|.+++|+|++++|++++.
T Consensus 169 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~ 225 (377)
T 3dwl_C 169 KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGH 225 (377)
T ss_dssp CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEET
T ss_pred EEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeC
Confidence 99999986322 1111222 68889999999999999998864
No 32
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.6e-34 Score=209.01 Aligned_cols=183 Identities=13% Similarity=0.198 Sum_probs=158.7
Q ss_pred eeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCceE
Q 039044 4 SSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPV 83 (194)
Q Consensus 4 ~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 83 (194)
....|+|++++|++|+.|+.|++||+.... .......|...|.+++|+|++++|++++.|+.|++||+++++.+.
T Consensus 101 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 175 (420)
T 3vl1_A 101 AVDTAKLQMRRFILGTTEGDIKVLDSNFNL-----QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPR 175 (420)
T ss_dssp EEEEECSSSCEEEEEETTSCEEEECTTSCE-----EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCE
T ss_pred EEEEEecCCCEEEEEECCCCEEEEeCCCcc-----eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCce
Confidence 445789999999999999999999998663 244556899999999999999999999999999999999999999
Q ss_pred EeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecC---------------------------CeEEEE
Q 039044 84 TVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP---------------------------DRCYAL 136 (194)
Q Consensus 84 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~---------------------------~~~~~~ 136 (194)
.+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+..+ ...++|
T Consensus 176 ~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~ 255 (420)
T 3vl1_A 176 TLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEF 255 (420)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCS
T ss_pred EEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEE
Confidence 99999999999999999999999999999999999998887776531 233456
Q ss_pred ecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCC-eeEEEEe
Q 039044 137 TVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQ-GFLVCIH 192 (194)
Q Consensus 137 ~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~-~l~~~~~ 192 (194)
+|+++++++++.||.|++||+++.+.. ......+...+.+++|+|+++ ++++|..
T Consensus 256 s~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~g~~ 311 (420)
T 3vl1_A 256 GTYGKYVIAGHVSGVITVHNVFSKEQT-IQLPSKFTCSCNSLTVDGNNANYIYAGYE 311 (420)
T ss_dssp SCTTEEEEEEETTSCEEEEETTTCCEE-EEECCTTSSCEEEEEECSSCTTEEEEEET
T ss_pred cCCCCEEEEEcCCCeEEEEECCCCcee-EEcccccCCCceeEEEeCCCCCEEEEEeC
Confidence 788999999999999999999987754 444456788999999999999 8887753
No 33
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.4e-34 Score=219.16 Aligned_cols=190 Identities=21% Similarity=0.300 Sum_probs=160.6
Q ss_pred CCeeeEEEcCCC-CEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCC
Q 039044 1 DSVSSLCFSPKA-NILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 1 ~~v~~~~~~p~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 79 (194)
+.|++++|+|++ ++|++|+.|++|++|++.............+.+|...|.+++|+|++++|++|+.|+.|++||+.++
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~ 462 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAG 462 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 479999999964 7999999999999999986543222233456789999999999999999999999999999999999
Q ss_pred CceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeE------EecCCeEEEEecCC--CEEEEEcCCCc
Q 039044 80 GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT------QQLPDRCYALTVRY--PLMVVGTADRN 151 (194)
Q Consensus 80 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~------~~~~~~~~~~~~~~--~~l~~~~~dg~ 151 (194)
.....+.+|...|.+++|+|++++|++++.|++|++||......... +.....+++|+|++ ..+++++.|+.
T Consensus 463 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~ 542 (694)
T 3dm0_A 463 VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKT 542 (694)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSC
T ss_pred cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCe
Confidence 99999999999999999999999999999999999999875433222 12234688999986 68999999999
Q ss_pred EEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 152 LVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 152 v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
|++||+++.+. ......|...|++++|+|++++|++|+.
T Consensus 543 v~vwd~~~~~~--~~~~~~h~~~v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 543 VKVWNLSNCKL--RSTLAGHTGYVSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp EEEEETTTCCE--EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEECCCCcE--EEEEcCCCCCEEEEEEeCCCCEEEEEeC
Confidence 99999998763 2334568899999999999999999864
No 34
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.5e-34 Score=202.40 Aligned_cols=186 Identities=37% Similarity=0.663 Sum_probs=156.6
Q ss_pred CCeeeEEEcCC---CCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecC
Q 039044 1 DSVSSLCFSPK---ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLL 77 (194)
Q Consensus 1 ~~v~~~~~~p~---~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~ 77 (194)
+.|++++|+|+ +++|++|+.||.|++|++.+... ........|...|.+++|+|++++|++++.||.|++||++
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 116 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLS 116 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC---EEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc---eeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcC
Confidence 47999999999 59999999999999999987432 2235566899999999999999999999999999999999
Q ss_pred CCCceEEeccCCCcEEEEEe--cCCCCEEEEeeCCCeEEEEeCCCCCceeEEe---------------------------
Q 039044 78 SGGQPVTVAMHDAPIKEVAW--IPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ--------------------------- 128 (194)
Q Consensus 78 ~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~--------------------------- 128 (194)
+++.+. +..|...|.+++| +|++++|++++.|+.|++||+++++.+..+.
T Consensus 117 ~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 195 (368)
T 3mmy_A 117 SNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVY 195 (368)
T ss_dssp TTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEE
T ss_pred CCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEE
Confidence 887665 5669999999999 8899999999999999999998765321111
Q ss_pred ---------------------------------------------------------------c---------------C
Q 039044 129 ---------------------------------------------------------------L---------------P 130 (194)
Q Consensus 129 ---------------------------------------------------------------~---------------~ 130 (194)
. .
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (368)
T 3mmy_A 196 QLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYA 275 (368)
T ss_dssp ECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECC
T ss_pred EeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccc
Confidence 0 2
Q ss_pred CeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 131 DRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 131 ~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
..+++++|++++|++++.||.|++||+++++. .. ....|..+|.+++|+|++++|++++.
T Consensus 276 v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~-~~-~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 276 VNGIAFHPVHGTLATVGSDGRFSFWDKDARTK-LK-TSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp EEEEEECTTTCCEEEEETTSCEEEEETTTTEE-EE-ECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred eEEEEEecCCCEEEEEccCCeEEEEECCCCcE-EE-EecCCCCCceEEEECCCCCeEEEEec
Confidence 45678999999999999999999999998754 23 33467889999999999999999975
No 35
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-33 Score=199.80 Aligned_cols=182 Identities=22% Similarity=0.389 Sum_probs=150.1
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.|.+++|+|++.++++|+.|++|++||+.++.. ...+.+|...|.+++|+|++++|++++.|+.|++||+.. ..
T Consensus 78 ~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~-----~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~ 151 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSWDKTLRLWDLRTGTT-----YKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-EC 151 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSEEEEEETTSSCE-----EEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CE
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcE-----EEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-Cc
Confidence 689999999999999999999999999988743 456678999999999999999999999999999999974 33
Q ss_pred eEEe---ccCCCcEEEEEecCCC----------CEEEEeeCCCeEEEEeCCCCCceeEEe---cCCeEEEEecCCCEEEE
Q 039044 82 PVTV---AMHDAPIKEVAWIPEM----------NLLATGSWDKTLKYWDTRQPNPVHTQQ---LPDRCYALTVRYPLMVV 145 (194)
Q Consensus 82 ~~~~---~~~~~~v~~~~~~~~~----------~~l~~~~~d~~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~ 145 (194)
.... ..|...|.+++|+|++ .+|++++.|+.|++||.+ .+....+. ....+++|+|++++|++
T Consensus 152 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~g~~l~s 230 (343)
T 2xzm_R 152 KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPNGKYIAT 230 (343)
T ss_dssp EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCCCCEEEE
Confidence 3333 2688899999999986 789999999999999943 44444443 34578999999999999
Q ss_pred EcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 146 GTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 146 ~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
|+.||.|++||++....+..... +...|.+++|+|++++++++..
T Consensus 231 gs~dg~v~iwd~~~~~~~~~~~~--~~~~v~~v~~sp~~~~la~~~d 275 (343)
T 2xzm_R 231 GGKDKKLLIWDILNLTYPQREFD--AGSTINQIAFNPKLQWVAVGTD 275 (343)
T ss_dssp EETTCEEEEEESSCCSSCSEEEE--CSSCEEEEEECSSSCEEEEEES
T ss_pred EcCCCeEEEEECCCCcccceeec--CCCcEEEEEECCCCCEEEEECC
Confidence 99999999999965543333332 3456999999999998887653
No 36
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.9e-34 Score=204.98 Aligned_cols=187 Identities=20% Similarity=0.272 Sum_probs=149.6
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.|++++|+|++. +++++.||+|++||+.+++... .......+|...|.+++|+|++++|++|+.|+.|++||+++++.
T Consensus 96 ~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~-~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~ 173 (357)
T 4g56_B 96 GVTDVAWVSEKG-ILVASDSGAVELWEILEKESLL-VNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAV 173 (357)
T ss_dssp CEEEEEEETTTE-EEEEETTSCEEEC--------C-CCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEE
T ss_pred CEEEEEEcCCCC-EEEEECCCEEEEeeccccceeE-EEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 589999999975 5567789999999998765311 11233457899999999999999999999999999999999999
Q ss_pred eEEeccCCCcEEEEEecCCCC-EEEEeeCCCeEEEEeCCCCCceeEEec-----CCeEEEEecC-CCEEEEEcCCCcEEE
Q 039044 82 PVTVAMHDAPIKEVAWIPEMN-LLATGSWDKTLKYWDTRQPNPVHTQQL-----PDRCYALTVR-YPLMVVGTADRNLVV 154 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~vwd~~~~~~~~~~~~-----~~~~~~~~~~-~~~l~~~~~dg~v~~ 154 (194)
+..+..|...|++++|+|++. ++++++.|+.|++||++++++...... ...+++|+|+ +.++++|+.|+.|++
T Consensus 174 ~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~ 253 (357)
T 4g56_B 174 LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSL 253 (357)
T ss_dssp EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEE
T ss_pred EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeE
Confidence 999999999999999999875 789999999999999999887655432 3467899997 468899999999999
Q ss_pred EECCCCCeeeEEeeCCCcceeeEEEEecCCC-eeEEEEe
Q 039044 155 FNLQNPQTEFKRINSPLKYQTRCVAAFPDQQ-GFLVCIH 192 (194)
Q Consensus 155 ~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~-~l~~~~~ 192 (194)
||+++++.. . ....+...|++++|+|++. +|++|+.
T Consensus 254 wd~~~~~~~-~-~~~~~~~~v~~l~~sp~~~~~lasgs~ 290 (357)
T 4g56_B 254 VNIKNPDSA-Q-TSAVHSQNITGLAYSYHSSPFLASISE 290 (357)
T ss_dssp EESSCGGGC-E-EECCCSSCEEEEEECSSSSCCEEEEET
T ss_pred EECCCCcEe-E-EEeccceeEEEEEEcCCCCCEEEEEeC
Confidence 999987643 2 2345788999999999985 5677653
No 37
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5e-35 Score=212.94 Aligned_cols=187 Identities=9% Similarity=0.122 Sum_probs=150.3
Q ss_pred CeeeEEEcC-CCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEec-CCCeEEEecCCCeEEEEecCCC
Q 039044 2 SVSSLCFSP-KANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD-DGTTVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 2 ~v~~~~~~p-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~ 79 (194)
.|+||+|+| ++++||+|+.||.|+|||+..... .......+|...|++++|+| ++++|++|+.||.|++||++++
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~---~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK---PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN 197 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC---CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc---eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC
Confidence 599999999 567999999999999999987653 22344568999999999998 6889999999999999999765
Q ss_pred CceEEec--cCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEE---ecCCeEEEEecCCC-EEEEEcCCCcEE
Q 039044 80 GQPVTVA--MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ---QLPDRCYALTVRYP-LMVVGTADRNLV 153 (194)
Q Consensus 80 ~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~---~~~~~~~~~~~~~~-~l~~~~~dg~v~ 153 (194)
....... .+...+.+++|+|++++|++++.||.|++||++.. .+..+ ...+.+++|+|+++ ++++++.|+.|+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~ 276 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVK 276 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeeeecCCCceEEEEecCcceee
Confidence 4433332 23456789999999999999999999999999753 33333 34557889999876 788999999999
Q ss_pred EEECCCCCeeeE-EeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 154 VFNLQNPQTEFK-RINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 154 ~~d~~~~~~~~~-~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+||+++.+.... .....|...|++++|+|+|.+|++++.
T Consensus 277 iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~ 316 (435)
T 4e54_B 277 IWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQ 316 (435)
T ss_dssp EEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEES
T ss_pred EEecccccccceEEEeeeccccccceeECCCCCeeEEEcC
Confidence 999987653322 223457889999999999999999864
No 38
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-34 Score=212.39 Aligned_cols=189 Identities=13% Similarity=0.025 Sum_probs=154.8
Q ss_pred CCeeeEEEcCC------CCEEEEeeCCCeEEEEecccCCcc------cccccccccCCCCCeeEEEEecCCCeEEEecCC
Q 039044 1 DSVSSLCFSPK------ANILVATSWDNQVRCWEISRGGTG------VASVPKASISHDHPVLCSTWKDDGTTVFSGGCD 68 (194)
Q Consensus 1 ~~v~~~~~~p~------~~~l~~~~~d~~i~i~~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 68 (194)
+.|.+++|+|+ +.+||+++.||+|++||+...... .......+.+|...|.+++|+|+ ..|++|+.|
T Consensus 208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~D 286 (524)
T 2j04_B 208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKN 286 (524)
T ss_dssp CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETT
T ss_pred CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCC
Confidence 36889999996 579999999999999999765421 00112345678999999999986 489999999
Q ss_pred CeEEEEecCCCC-ceEEeccCCCcEEEE--EecCCC-CEEEEeeCCCeEEEEeCCCCCceeEEec-----CCeEEEEecC
Q 039044 69 KQVKMWPLLSGG-QPVTVAMHDAPIKEV--AWIPEM-NLLATGSWDKTLKYWDTRQPNPVHTQQL-----PDRCYALTVR 139 (194)
Q Consensus 69 ~~i~~~d~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~v~vwd~~~~~~~~~~~~-----~~~~~~~~~~ 139 (194)
|.|++||++++. +...+..|...|+++ +|+|++ ++|++++.|++|++||+++++....+.. ...+++|+|+
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~ 366 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQ 366 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETT
T ss_pred CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCC
Confidence 999999998764 445688999999999 578887 8999999999999999998776544332 2467999999
Q ss_pred CCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 140 YPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 140 ~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++.+++++.|++|++||++++.... .+ .+|...|.+++|+|+|+.|++|+.
T Consensus 367 ~~~l~s~~~d~tv~lwd~~~~~~~~-~l-~gH~~~V~sva~Sp~g~~l~Sgs~ 417 (524)
T 2j04_B 367 IYSYIYSDGASSLRAVPSRAAFAVH-PL-VSRETTITAIGVSRLHPMVLAGSA 417 (524)
T ss_dssp TTEEEEECSSSEEEEEETTCTTCCE-EE-EECSSCEEEEECCSSCCBCEEEET
T ss_pred cCeEEEeCCCCcEEEEECcccccce-ee-ecCCCceEEEEeCCCCCeEEEEEC
Confidence 9999999999999999999876433 22 248889999999999999999864
No 39
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8.6e-35 Score=208.37 Aligned_cols=186 Identities=20% Similarity=0.295 Sum_probs=156.9
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
++|++++|+|++++|++|+.|++|++||+.+.. ....+..|...|.+++|+|++++|++|+.|+.+++|++.+..
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~-----~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~ 141 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ-----KTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQA 141 (380)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTTE-----EEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCS
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-----cceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCc
Confidence 479999999999999999999999999998764 245667899999999999999999999999999999987532
Q ss_pred -------ceEEeccCCCcEEEEEecCC-CCEEEEeeCCCeEEEEeCCCCCceeEEe--------cCCeEEEEec-CCCEE
Q 039044 81 -------QPVTVAMHDAPIKEVAWIPE-MNLLATGSWDKTLKYWDTRQPNPVHTQQ--------LPDRCYALTV-RYPLM 143 (194)
Q Consensus 81 -------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~vwd~~~~~~~~~~~--------~~~~~~~~~~-~~~~l 143 (194)
....+.+|...|.+++|.|+ +..|++++.|++|++||+++++.+..+. ....++++++ +++++
T Consensus 142 ~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 221 (380)
T 3iz6_a 142 DRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMF 221 (380)
T ss_dssp SCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEE
T ss_pred cccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEE
Confidence 23457789999999999996 4579999999999999999998876652 2235667766 78999
Q ss_pred EEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 144 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 144 ~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++|+.|+.|++||++........ ..+|...|.+++|+|++++|++|+.
T Consensus 222 ~sgs~D~~v~~wd~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~l~s~s~ 269 (380)
T 3iz6_a 222 ISGSCDTTVRLWDLRITSRAVRT-YHGHEGDINSVKFFPDGQRFGTGSD 269 (380)
T ss_dssp EEEETTSCEEEEETTTTCCCCEE-ECCCSSCCCEEEECTTSSEEEEECS
T ss_pred EEEECCCeEEEEECCCCCcceEE-ECCcCCCeEEEEEecCCCeEEEEcC
Confidence 99999999999999865443333 3568899999999999999999864
No 40
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2e-33 Score=196.17 Aligned_cols=183 Identities=20% Similarity=0.354 Sum_probs=154.9
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.|.+++|+|++++|++|+.|+.|++||+.+... ...+..|...+.+++|+|++++|++|+.|+.|++||+++++.
T Consensus 67 ~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 141 (312)
T 4ery_A 67 GISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC-----LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 141 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-----EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE
T ss_pred ceEEEEEcCCCCEEEEECCCCEEEEEECCCCcE-----EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE
Confidence 689999999999999999999999999987743 456678999999999999999999999999999999999999
Q ss_pred eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec----CCeEEEEecCCCEEEEEcCCCcEEEEEC
Q 039044 82 PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL----PDRCYALTVRYPLMVVGTADRNLVVFNL 157 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~dg~v~~~d~ 157 (194)
+..+..|..+|.+++|+|++++|++++.|+.|++||+++++.+..+.. ....++++|+++++++++.||.|++||+
T Consensus 142 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~ 221 (312)
T 4ery_A 142 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 221 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred EEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 999999999999999999999999999999999999999887766533 3467899999999999999999999999
Q ss_pred CCCCeeeEEeeCCCccee--eEEEEe-cCCCeeEEEE
Q 039044 158 QNPQTEFKRINSPLKYQT--RCVAAF-PDQQGFLVCI 191 (194)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v--~~i~~~-p~~~~l~~~~ 191 (194)
++++.. ... ..+.... ....++ +++.++++|+
T Consensus 222 ~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~l~sg~ 256 (312)
T 4ery_A 222 SKGKCL-KTY-TGHKNEKYCIFANFSVTGGKWIVSGS 256 (312)
T ss_dssp TTTEEE-EEE-CSSCCSSSCCCEEEECSSSCEEEECC
T ss_pred CCCcEE-EEE-EecCCceEEEEEEEEeCCCcEEEEEC
Confidence 987643 222 2333332 223344 5677777765
No 41
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4e-35 Score=209.51 Aligned_cols=190 Identities=12% Similarity=0.097 Sum_probs=149.6
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
+.|++++|+|++++|++++.|++|++||+..... .........|...|.+++|+|++++|++++.|+.|++||+++++
T Consensus 56 ~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 56 KIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT--WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp SCEEEEEECTTTCCEEEEETTSSEEEC------C--CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC----
T ss_pred ceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc--eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcc
Confidence 3689999999999999999999999999987641 01234556799999999999999999999999999999999877
Q ss_pred ---ceEEecc-CCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC------------------ceeEE--ecCCeEEEE
Q 039044 81 ---QPVTVAM-HDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN------------------PVHTQ--QLPDRCYAL 136 (194)
Q Consensus 81 ---~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~------------------~~~~~--~~~~~~~~~ 136 (194)
....+.. |...|.+++|+|++++|++++.|+.|++||++..+ ++..+ .....+++|
T Consensus 134 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 213 (377)
T 3dwl_C 134 DWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGF 213 (377)
T ss_dssp -CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEE
T ss_pred cceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEE
Confidence 3667777 99999999999999999999999999999986322 22222 223578999
Q ss_pred ecCCCEEEEEcCCCcEEEEECCCCCeee--EEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 137 TVRYPLMVVGTADRNLVVFNLQNPQTEF--KRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 137 ~~~~~~l~~~~~dg~v~~~d~~~~~~~~--~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+|++++|++++.||.|++||+++.+.+. ......|...+.+++|+|++++|+++..
T Consensus 214 sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 271 (377)
T 3dwl_C 214 SPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYN 271 (377)
T ss_dssp CTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESS
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcC
Confidence 9999999999999999999999887532 2223457788999999999999998854
No 42
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.9e-34 Score=203.93 Aligned_cols=183 Identities=13% Similarity=0.096 Sum_probs=147.6
Q ss_pred CeeeEEEcCCCCEEEEe--eCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCC
Q 039044 2 SVSSLCFSPKANILVAT--SWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~--~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 79 (194)
.+.+++|+|||++++++ +.|++|++||+.+... .. ...|...|.+++|+|+++++++++.++ +.+|+..++
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~-----~~-~~~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~ 207 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE-----KF-EIETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTG 207 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE-----EE-EEECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTC
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE-----EE-EeCCCCceEEEEEccCCceEEecccee-EEEEEeccC
Confidence 36789999999987654 4789999999987642 22 234778899999999999999998555 666776776
Q ss_pred CceEE--eccCCCcEEEEEecCCCCEEEEeeCCC----eEEEEeCCCCCce----eEEe---cCCeEEEEecCCCEEEEE
Q 039044 80 GQPVT--VAMHDAPIKEVAWIPEMNLLATGSWDK----TLKYWDTRQPNPV----HTQQ---LPDRCYALTVRYPLMVVG 146 (194)
Q Consensus 80 ~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~----~v~vwd~~~~~~~----~~~~---~~~~~~~~~~~~~~l~~~ 146 (194)
+.+.. ...|...|.+++|+|+++++++++.|+ .+++||+...... ..+. ....+++|+|++++|++|
T Consensus 208 ~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasg 287 (365)
T 4h5i_A 208 SCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLA 287 (365)
T ss_dssp CEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEE
T ss_pred cceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEE
Confidence 66543 356888999999999999999999887 6888998765432 2222 245789999999999999
Q ss_pred cCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 147 TADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 147 ~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+.|++|+|||+++++. .......|..+|++++|+|||++|++|+.
T Consensus 288 s~D~~V~iwd~~~~~~-~~~~~~gH~~~V~~v~fSpdg~~laS~S~ 332 (365)
T 4h5i_A 288 SNDNSIALVKLKDLSM-SKIFKQAHSFAITEVTISPDSTYVASVSA 332 (365)
T ss_dssp ETTSCEEEEETTTTEE-EEEETTSSSSCEEEEEECTTSCEEEEEET
T ss_pred cCCCEEEEEECCCCcE-EEEecCcccCCEEEEEECCCCCEEEEEeC
Confidence 9999999999998763 44555679999999999999999999874
No 43
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-33 Score=200.60 Aligned_cols=189 Identities=18% Similarity=0.236 Sum_probs=159.3
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecC--CCeEEEecCCCeEEEEecCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDD--GTTVFSGGCDKQVKMWPLLS 78 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~~~d~~~ 78 (194)
++|++++|+|++++|++|+.||.|++|++..... .....+.+|..+|.+++|+|+ +++|++++.||.|++||+++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 88 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH---KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 88 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE---EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEET
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc---eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCC
Confidence 4799999999999999999999999999984322 334556789999999999977 89999999999999999998
Q ss_pred CC--ceEEeccCCCcEEEEEecCC--CCEEEEeeCCCeEEEEeCCCCCcee--EE---ecCCeEEEEec-----------
Q 039044 79 GG--QPVTVAMHDAPIKEVAWIPE--MNLLATGSWDKTLKYWDTRQPNPVH--TQ---QLPDRCYALTV----------- 138 (194)
Q Consensus 79 ~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~vwd~~~~~~~~--~~---~~~~~~~~~~~----------- 138 (194)
++ .+..+..|...|.+++|+|+ +++|++++.|+.|++||++...... .. .....+++++|
T Consensus 89 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 168 (379)
T 3jrp_A 89 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 168 (379)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---------
T ss_pred CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccC
Confidence 87 66677889999999999998 9999999999999999999874332 22 23457889999
Q ss_pred --CCCEEEEEcCCCcEEEEECCCCCee--eEEeeCCCcceeeEEEEecC---CCeeEEEEe
Q 039044 139 --RYPLMVVGTADRNLVVFNLQNPQTE--FKRINSPLKYQTRCVAAFPD---QQGFLVCIH 192 (194)
Q Consensus 139 --~~~~l~~~~~dg~v~~~d~~~~~~~--~~~~~~~~~~~v~~i~~~p~---~~~l~~~~~ 192 (194)
++.++++++.||.|++||+++.... .......|...|.+++|+|+ +++|+++..
T Consensus 169 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 169 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp -CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred CCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC
Confidence 6899999999999999999876533 22334568889999999999 888888763
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=6.3e-33 Score=194.91 Aligned_cols=185 Identities=14% Similarity=0.158 Sum_probs=163.2
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.|.+++|+|++++|++++.|+.|++||+..... ........|...+.+++|+|+++++++++.|+.|++||+++++.
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~ 175 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP---RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL 175 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC-----EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCc---ceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCce
Confidence 689999999999999999999999999987642 23445667889999999999999999999999999999999988
Q ss_pred eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec--CCeEEEEecCCCEEEEEcCCCcEEEEECCC
Q 039044 82 PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL--PDRCYALTVRYPLMVVGTADRNLVVFNLQN 159 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~ 159 (194)
+..+..|...+.+++|+|+++++++++.|+.|++||+++++.+..... ....++++|+++++++++.++.|++||+++
T Consensus 176 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~ 255 (337)
T 1gxr_A 176 VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNK 255 (337)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTS
T ss_pred eeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 889999999999999999999999999999999999999887766654 456889999999999999999999999998
Q ss_pred CCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 160 PQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 160 ~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
.+.. ....+...+.+++|+|++++++++..
T Consensus 256 ~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~ 285 (337)
T 1gxr_A 256 PDKY---QLHLHESCVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp SCEE---EECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCeE---EEcCCccceeEEEECCCCCEEEEecC
Confidence 7632 23457889999999999999998863
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1e-32 Score=193.81 Aligned_cols=188 Identities=15% Similarity=0.238 Sum_probs=158.3
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
++|++++|+|++++|++++ ||.|++|++................|...+.+++|+|++++|++++.|+.|++||+++++
T Consensus 52 ~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 130 (337)
T 1gxr_A 52 EVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT 130 (337)
T ss_dssp SCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-
T ss_pred CceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC
Confidence 3689999999999999999 999999999876431111112223688999999999999999999999999999999887
Q ss_pred --ceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecCCCEEEEEcCCCcEEEE
Q 039044 81 --QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTADRNLVVF 155 (194)
Q Consensus 81 --~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~dg~v~~~ 155 (194)
....+..|...|.+++|+|+++++++++.|+.|++||+++++.+..+.. ...+++++|+++++++++.||.|++|
T Consensus 131 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~ 210 (337)
T 1gxr_A 131 PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSW 210 (337)
T ss_dssp -EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEE
Confidence 4556778999999999999999999999999999999999887777654 34688999999999999999999999
Q ss_pred ECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 156 NLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 156 d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
|+++.+.... . .+...+.+++|+|+++.++++..
T Consensus 211 d~~~~~~~~~-~--~~~~~v~~~~~s~~~~~l~~~~~ 244 (337)
T 1gxr_A 211 DLREGRQLQQ-H--DFTSQIFSLGYCPTGEWLAVGME 244 (337)
T ss_dssp ETTTTEEEEE-E--ECSSCEEEEEECTTSSEEEEEET
T ss_pred ECCCCceEee-e--cCCCceEEEEECCCCCEEEEEcC
Confidence 9998764332 2 25678999999999999998863
No 46
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.4e-33 Score=204.08 Aligned_cols=185 Identities=15% Similarity=0.212 Sum_probs=156.1
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
+.|++++|+|++++|++|+.|+.|++||+.+... ...+.+|...|.+++|+|++++|++++.|+.|++||+++++
T Consensus 140 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISSSQDMQLKIWSVKDGSN-----PRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCC-----CEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred CccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC-----ceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 4689999999999999999999999999987743 45667899999999999999999999999999999999998
Q ss_pred ceEEecc---CC---------------------CcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec----CCe
Q 039044 81 QPVTVAM---HD---------------------APIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL----PDR 132 (194)
Q Consensus 81 ~~~~~~~---~~---------------------~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~----~~~ 132 (194)
.+..+.. +. ..+.+++|+|++++|++++.||.|++||+++++.+..... ...
T Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 294 (420)
T 3vl1_A 215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCN 294 (420)
T ss_dssp EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEE
T ss_pred eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCce
Confidence 8877764 33 3445555688999999999999999999999887766643 356
Q ss_pred EEEEecCCC-EEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 133 CYALTVRYP-LMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 133 ~~~~~~~~~-~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
+++|+|+++ ++++++.||.|++||+++++.+.......+...+.++.+ |++++|++++
T Consensus 295 ~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~ 353 (420)
T 3vl1_A 295 SLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSG 353 (420)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEET
T ss_pred eEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEec
Confidence 899999998 999999999999999998876555555556778888855 5778888774
No 47
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-33 Score=196.18 Aligned_cols=185 Identities=14% Similarity=0.209 Sum_probs=159.5
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
++|++++|+|++++|++++.||.|++||+.++.. ...+..|...|.+++|+|++++|++++.||.|++||+++++
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 107 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGER-----LGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQ 107 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSSCEEEEETTTCCE-----EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred ceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchh-----hhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 4699999999999999999999999999987743 45667899999999999999999999999999999999999
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEeeCC-----CeEEEEeCCCCCce-----------eEEec-----CCeEEEEecC
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGSWD-----KTLKYWDTRQPNPV-----------HTQQL-----PDRCYALTVR 139 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~vwd~~~~~~~-----------~~~~~-----~~~~~~~~~~ 139 (194)
.+..+. +...+.+++|+|+++++++++.+ +.|++||++..... ..... ...+++++|+
T Consensus 108 ~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (369)
T 3zwl_B 108 CVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTK 186 (369)
T ss_dssp EEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGG
T ss_pred EEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCC
Confidence 888877 88999999999999999999998 99999999866432 11111 4568899999
Q ss_pred CCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 140 YPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 140 ~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++++++++.||.|++||+++........ ..+...+.+++|+|++++|+++..
T Consensus 187 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~ 238 (369)
T 3zwl_B 187 GKYIIAGHKDGKISKYDVSNNYEYVDSI-DLHEKSISDMQFSPDLTYFITSSR 238 (369)
T ss_dssp GCEEEEEETTSEEEEEETTTTTEEEEEE-ECCSSCEEEEEECTTSSEEEEEET
T ss_pred CCEEEEEcCCCEEEEEECCCCcEeEEEE-ecCCCceeEEEECCCCCEEEEecC
Confidence 9999999999999999999854444444 347788999999999999998863
No 48
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.5e-33 Score=208.20 Aligned_cols=181 Identities=24% Similarity=0.326 Sum_probs=156.5
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
++|.+++|+|++++|++++.|+.|++|+.... .......|...|.+++|+|++++|++++.|+.|++||. +++
T Consensus 386 ~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~------~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~ 458 (577)
T 2ymu_A 386 SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ------LLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQ 458 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECTTCC------EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSC
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC------EEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCC
Confidence 36899999999999999999999999996432 24556789999999999999999999999999999996 567
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecCCCEEEEEcCCCcEEEEEC
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTADRNLVVFNL 157 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~dg~v~~~d~ 157 (194)
.+..+..|...|++++|+|++++|++++.|+.|++||. +++.+..+.. ...+++|+|++++|++++.||.|++||.
T Consensus 459 ~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 459 LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 77888999999999999999999999999999999995 5677766654 3578899999999999999999999996
Q ss_pred CCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 158 QNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
. ++ .... ..+|...|.+++|+|||++|++++.
T Consensus 538 ~-~~-~~~~-~~~h~~~v~~~~fs~dg~~l~s~~~ 569 (577)
T 2ymu_A 538 N-GQ-LLQT-LTGHSSSVWGVAFSPDGQTIASASS 569 (577)
T ss_dssp T-SC-EEEE-EECCSSCEEEEEECTTSSCEEEEET
T ss_pred C-CC-EEEE-EcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 4 33 2333 3468899999999999999998864
No 49
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.7e-32 Score=195.36 Aligned_cols=185 Identities=14% Similarity=0.164 Sum_probs=153.2
Q ss_pred CCeeeEEEcCCC-CEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEec-CCCeEEEecCCCeEEEEecCC
Q 039044 1 DSVSSLCFSPKA-NILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD-DGTTVFSGGCDKQVKMWPLLS 78 (194)
Q Consensus 1 ~~v~~~~~~p~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~~~d~~~ 78 (194)
+.|++++|+|++ ++|++|+.||.|++||+..... .......+|...|.+++|+| ++++|++++.|+.|++||++.
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 150 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNK---TSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG 150 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTC---EEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccc---ceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC
Confidence 368999999998 9999999999999999987653 11222346999999999999 789999999999999999985
Q ss_pred CCceEEecc---CCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecCCC-EEEEEcCCCc
Q 039044 79 GGQPVTVAM---HDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYP-LMVVGTADRN 151 (194)
Q Consensus 79 ~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~-~l~~~~~dg~ 151 (194)
..+..+.. |...|.+++|+|++++|++++.|+.|++||++ ++.+..+.. ...+++|+|+++ ++++++.|+.
T Consensus 151 -~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~ 228 (383)
T 3ei3_B 151 -SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDAT 228 (383)
T ss_dssp -CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred -CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCE
Confidence 55555543 34789999999999999999999999999994 566665543 457899999998 9999999999
Q ss_pred EEEEECCCCC---eeeEEeeCCCcceeeEEEEec-CCCeeEEEEe
Q 039044 152 LVVFNLQNPQ---TEFKRINSPLKYQTRCVAAFP-DQQGFLVCIH 192 (194)
Q Consensus 152 v~~~d~~~~~---~~~~~~~~~~~~~v~~i~~~p-~~~~l~~~~~ 192 (194)
|++||+++.+ ...... .|...+.+++|+| ++++|+++..
T Consensus 229 i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~ 271 (383)
T 3ei3_B 229 VKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQ 271 (383)
T ss_dssp EEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEES
T ss_pred EEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcC
Confidence 9999999732 122222 4788999999999 9999998864
No 50
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.8e-32 Score=194.15 Aligned_cols=189 Identities=15% Similarity=0.158 Sum_probs=156.8
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
++|++++|+|++++|++++.|+.|++|++..... .....+..|...|.+++|+|++++|++++.|+.|++||+++++
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW---VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE---EEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE---EeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCe
Confidence 4799999999999999999999999999987631 1345666899999999999999999999999999999998876
Q ss_pred ceEE--eccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc---eeEE----ecCCeEEEEecCCCEEEEEcCCCc
Q 039044 81 QPVT--VAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP---VHTQ----QLPDRCYALTVRYPLMVVGTADRN 151 (194)
Q Consensus 81 ~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~---~~~~----~~~~~~~~~~~~~~~l~~~~~dg~ 151 (194)
.... +..|...|.+++|+|++++|++++.|+.|++||++..+. .... .....+++|+|+++++++++.||.
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 165 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK 165 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCC
Confidence 5433 467889999999999999999999999999999998774 2222 234578999999999999999999
Q ss_pred EEEEECCCC----------------CeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 152 LVVFNLQNP----------------QTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 152 v~~~d~~~~----------------~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
|++||++.. ..........|...+.+++|+|++++|+++..
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 222 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH 222 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET
T ss_pred EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC
Confidence 999997521 11122333467889999999999999998863
No 51
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.2e-32 Score=191.76 Aligned_cols=191 Identities=16% Similarity=0.229 Sum_probs=159.3
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEec--CCCeEEEecCCCeEEEEecCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD--DGTTVFSGGCDKQVKMWPLLS 78 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~~~d~~~ 78 (194)
++|++++|+|++++|++|+.||.|++|++...... ......+.+|..+|.+++|+| ++++|++++.||.|++||++.
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~ 90 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN-WELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDP 90 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC-EEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECT
T ss_pred cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc-ceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCC
Confidence 47999999999999999999999999999865321 122345568999999999999 699999999999999999988
Q ss_pred C---------CceEEeccCCCcEEEEEecCC--CCEEEEeeCCCeEEEEeCCCCCceeEEe----------------cCC
Q 039044 79 G---------GQPVTVAMHDAPIKEVAWIPE--MNLLATGSWDKTLKYWDTRQPNPVHTQQ----------------LPD 131 (194)
Q Consensus 79 ~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~vwd~~~~~~~~~~~----------------~~~ 131 (194)
+ +.+..+..|...|.+++|+|+ ++++++++.|+.|++||+++++.+..+. ...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (351)
T 3f3f_A 91 DQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSD 170 (351)
T ss_dssp TSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCC
T ss_pred CcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccce
Confidence 7 346677889999999999999 9999999999999999999877543321 234
Q ss_pred eEEEEecC---CCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCC----CeeEEEEe
Q 039044 132 RCYALTVR---YPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQ----QGFLVCIH 192 (194)
Q Consensus 132 ~~~~~~~~---~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~----~~l~~~~~ 192 (194)
.+++++|+ +..+++++.++.+.+|+....+.........|...|.+++|+|++ ++|++|..
T Consensus 171 ~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 171 FCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCK 238 (351)
T ss_dssp EEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEET
T ss_pred eEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcC
Confidence 68899997 899999999999988888776654444555688999999999998 78888753
No 52
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2e-32 Score=199.42 Aligned_cols=190 Identities=11% Similarity=0.170 Sum_probs=153.0
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccc---cccccccCCCCCeeEEEEecCC-CeEEEecCCCeEEEEec
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVA---SVPKASISHDHPVLCSTWKDDG-TTVFSGGCDKQVKMWPL 76 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~~~d~ 76 (194)
+.|++++|+|++++|++| .|+.|++||+........ ..+.....|...|.+++|+|++ ++|++|+.||.|++||+
T Consensus 178 ~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp SCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred cceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 368899999999999998 799999999984322100 0112456799999999999998 99999999999999999
Q ss_pred CCCCc----eEEeccCCC------------cEEEEEecCCCCEEEEeeCCCeEEEEeCCC-CCceeEEecCC--------
Q 039044 77 LSGGQ----PVTVAMHDA------------PIKEVAWIPEMNLLATGSWDKTLKYWDTRQ-PNPVHTQQLPD-------- 131 (194)
Q Consensus 77 ~~~~~----~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~-~~~~~~~~~~~-------- 131 (194)
++++. ...+..|.. .|.+++|+|++++|++++. +.|++||+++ ++++..+..+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~ 335 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCS 335 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHH
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccc
Confidence 99886 677887776 8999999999999999998 9999999997 77776665442
Q ss_pred ----------eEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEe------------------------------eCCC
Q 039044 132 ----------RCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRI------------------------------NSPL 171 (194)
Q Consensus 132 ----------~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~------------------------------~~~~ 171 (194)
..++|+|++++|++|+.||.|++||+++++...... ....
T Consensus 336 ~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (447)
T 3dw8_B 336 LYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDF 415 (447)
T ss_dssp HHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCT
T ss_pred cccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCccccccccccccc
Confidence 128999999999999999999999999876432111 0123
Q ss_pred cceeeEEEEecCCCeeEEEEe
Q 039044 172 KYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 172 ~~~v~~i~~~p~~~~l~~~~~ 192 (194)
...+..++|+|++..|+++..
T Consensus 416 ~~~i~~~~~~p~~~~la~~~~ 436 (447)
T 3dw8_B 416 NKKILHTAWHPKENIIAVATT 436 (447)
T ss_dssp TSCCCEEEECSSSSEEEEECS
T ss_pred CCceeEEEECCCCCEEEEEec
Confidence 456889999999999998864
No 53
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.2e-33 Score=197.92 Aligned_cols=189 Identities=17% Similarity=0.254 Sum_probs=150.2
Q ss_pred CCeeeEEEcC--CCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecC--CCeEEEecCCCeEEEEec
Q 039044 1 DSVSSLCFSP--KANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDD--GTTVFSGGCDKQVKMWPL 76 (194)
Q Consensus 1 ~~v~~~~~~p--~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~~~d~ 76 (194)
++|++++|+| ++++|++|+.|++|++||+..+.. .....+.+|...|.+++|+|+ +.+|++|+.|+.|++||+
T Consensus 58 ~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~---~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~ 134 (316)
T 3bg1_A 58 GPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTW---EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTY 134 (316)
T ss_dssp SCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCC---CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEE
T ss_pred ccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcc---eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEec
Confidence 4689999986 489999999999999999986532 123345679999999999997 789999999999999999
Q ss_pred CCCCc---eEEeccCCCcEEEEEecCC-----------------CCEEEEeeCCCeEEEEeCCCCC---ceeEEec---C
Q 039044 77 LSGGQ---PVTVAMHDAPIKEVAWIPE-----------------MNLLATGSWDKTLKYWDTRQPN---PVHTQQL---P 130 (194)
Q Consensus 77 ~~~~~---~~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~d~~v~vwd~~~~~---~~~~~~~---~ 130 (194)
+.+.. ...+..|...|.+++|+|+ +++|++++.|+.|++||++... ++..+.. .
T Consensus 135 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~ 214 (316)
T 3bg1_A 135 TGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDW 214 (316)
T ss_dssp CSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSC
T ss_pred CCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCc
Confidence 87643 2345678999999999997 4689999999999999997553 3333333 3
Q ss_pred CeEEEEecCC----CEEEEEcCCCcEEEEECCCCCe--eeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 131 DRCYALTVRY----PLMVVGTADRNLVVFNLQNPQT--EFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 131 ~~~~~~~~~~----~~l~~~~~dg~v~~~d~~~~~~--~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
..+++|+|++ ++|++++.||+|++||+++... ........|...|.+++|+|+++.|++++.
T Consensus 215 V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 215 VRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp EEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES
T ss_pred eEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC
Confidence 5788999986 7899999999999999986321 011112346788999999999999998864
No 54
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.7e-33 Score=202.68 Aligned_cols=190 Identities=11% Similarity=0.127 Sum_probs=149.5
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCc------ccccccccccCCC------------CCeeEEEEecCC--C
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGT------GVASVPKASISHD------------HPVLCSTWKDDG--T 60 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~------~~~~~~~~~~~~~------------~~i~~~~~~~~~--~ 60 (194)
++|++++|+|++++|++|+.||.|++|++..... ........+.+|. ..|.+++|+|++ .
T Consensus 29 ~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~ 108 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAA 108 (447)
T ss_dssp GSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSS
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcc
Confidence 4799999999999999999999999999987541 1111234556787 889999999998 7
Q ss_pred eEEEecCCCeEEEEecCCCCce---------------------------------------EE-eccCCCcEEEEEecCC
Q 039044 61 TVFSGGCDKQVKMWPLLSGGQP---------------------------------------VT-VAMHDAPIKEVAWIPE 100 (194)
Q Consensus 61 ~l~~~~~d~~i~~~d~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~~~~ 100 (194)
+|++++.|+.|++||+.++... .. ..+|...|.+++|+|+
T Consensus 109 ~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 188 (447)
T 3dw8_B 109 QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD 188 (447)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT
T ss_pred eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC
Confidence 8999999999999998764321 12 3579999999999999
Q ss_pred CCEEEEeeCCCeEEEEeCCCC-CceeE----------EecCCeEEEEecCC-CEEEEEcCCCcEEEEECCCCCee---eE
Q 039044 101 MNLLATGSWDKTLKYWDTRQP-NPVHT----------QQLPDRCYALTVRY-PLMVVGTADRNLVVFNLQNPQTE---FK 165 (194)
Q Consensus 101 ~~~l~~~~~d~~v~vwd~~~~-~~~~~----------~~~~~~~~~~~~~~-~~l~~~~~dg~v~~~d~~~~~~~---~~ 165 (194)
+++|+++ .|+.|++||+++. +.+.. +.....+++|+|++ +++++|+.||.|++||+++.+.. ..
T Consensus 189 ~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 267 (447)
T 3dw8_B 189 YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSK 267 (447)
T ss_dssp SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCE
T ss_pred CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceee
Confidence 9999998 7999999999843 33332 22345789999998 99999999999999999987631 22
Q ss_pred EeeCCCcc------------eeeEEEEecCCCeeEEEEe
Q 039044 166 RINSPLKY------------QTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 166 ~~~~~~~~------------~v~~i~~~p~~~~l~~~~~ 192 (194)
.+ ..+.. .|.+++|+|++++|+++..
T Consensus 268 ~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 268 LF-EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp EE-CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred Ee-ccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 22 23443 8999999999999998864
No 55
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-32 Score=194.70 Aligned_cols=189 Identities=18% Similarity=0.254 Sum_probs=157.0
Q ss_pred CCeeeEEEcCC--CCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecC--CCeEEEecCCCeEEEEec
Q 039044 1 DSVSSLCFSPK--ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDD--GTTVFSGGCDKQVKMWPL 76 (194)
Q Consensus 1 ~~v~~~~~~p~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~~~d~ 76 (194)
++|++++|+|+ +++|++|+.||.|++||+..+.. ........|...+.+++|+|+ +++|++++.|+.|++||+
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~ 132 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW---SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEF 132 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEE---EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCce---eEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEec
Confidence 36899999987 89999999999999999988642 234556678999999999999 999999999999999999
Q ss_pred CCCCc--eEEeccCCCcEEEEEecC-------------CCCEEEEeeCCCeEEEEeCCCCCce----eEEe---cCCeEE
Q 039044 77 LSGGQ--PVTVAMHDAPIKEVAWIP-------------EMNLLATGSWDKTLKYWDTRQPNPV----HTQQ---LPDRCY 134 (194)
Q Consensus 77 ~~~~~--~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~d~~v~vwd~~~~~~~----~~~~---~~~~~~ 134 (194)
+.+.. ...+..|...|.+++|+| ++.++++++.|+.|++||+++++.. ..+. ....++
T Consensus 133 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~ 212 (379)
T 3jrp_A 133 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 212 (379)
T ss_dssp CTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred CCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEE
Confidence 88743 445678999999999999 6999999999999999999876643 2232 345689
Q ss_pred EEecC---CCEEEEEcCCCcEEEEECCCCCeeeE---EeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 135 ALTVR---YPLMVVGTADRNLVVFNLQNPQTEFK---RINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 135 ~~~~~---~~~l~~~~~dg~v~~~d~~~~~~~~~---~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+|+|+ ++++++++.||.|++||+++...+.. .....+...+.+++|+|++++|+++..
T Consensus 213 ~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 276 (379)
T 3jrp_A 213 AWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 276 (379)
T ss_dssp EECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES
T ss_pred EECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC
Confidence 99999 89999999999999999998653221 222337788999999999999998754
No 56
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.2e-32 Score=208.33 Aligned_cols=182 Identities=19% Similarity=0.323 Sum_probs=155.0
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.|.+++|+|++++|++|+.|++|++||+.++. ....+.+|...|.+++|+|++++|++++.|+.|++||......
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~-----~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~ 506 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDGELRLWDLAAGV-----STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK 506 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTE-----EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEECCCCc-----ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc
Confidence 68999999999999999999999999998764 2456678999999999999999999999999999999865433
Q ss_pred eEEe---ccCCCcEEEEEecCCC--CEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecCCCEEEEEcCCCcEE
Q 039044 82 PVTV---AMHDAPIKEVAWIPEM--NLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTADRNLV 153 (194)
Q Consensus 82 ~~~~---~~~~~~v~~~~~~~~~--~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~dg~v~ 153 (194)
.... .+|...|.+++|+|++ ..+++++.|+.|++||+++.+....+.. ...+++++|+++++++|+.||.|+
T Consensus 507 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~ 586 (694)
T 3dm0_A 507 YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVL 586 (694)
T ss_dssp EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCE
T ss_pred eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence 2221 4688899999999986 5899999999999999999888777654 356899999999999999999999
Q ss_pred EEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 154 VFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 154 ~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
+||+++++.. ... .+...+.+++|+|++..++++.
T Consensus 587 iwd~~~~~~~-~~~--~~~~~v~~~~~sp~~~~l~~~~ 621 (694)
T 3dm0_A 587 LWDLAEGKKL-YSL--EANSVIHALCFSPNRYWLCAAT 621 (694)
T ss_dssp EEETTTTEEE-ECC--BCSSCEEEEEECSSSSEEEEEE
T ss_pred EEECCCCceE-EEe--cCCCcEEEEEEcCCCcEEEEEc
Confidence 9999987643 222 2456799999999999888765
No 57
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.3e-31 Score=188.62 Aligned_cols=190 Identities=22% Similarity=0.309 Sum_probs=159.2
Q ss_pred CCeeeEEEcCC-CCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCC
Q 039044 1 DSVSSLCFSPK-ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 1 ~~v~~~~~~p~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 79 (194)
++|++++|+|+ +++|++|+.|++|++||+...+.........+.+|...|.+++|+|++++|++++.|+.|++|+....
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~ 118 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTG 118 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeeccc
Confidence 47999999997 68999999999999999987654333344566789999999999999999999999999999999988
Q ss_pred CceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEE----ecCCeEEEEecCC--CEEEEEcCCCcEE
Q 039044 80 GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ----QLPDRCYALTVRY--PLMVVGTADRNLV 153 (194)
Q Consensus 80 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~----~~~~~~~~~~~~~--~~l~~~~~dg~v~ 153 (194)
........+...+..+.+++++++|++++.|+.+++||+......... ......+++++++ ..+++++.|+.|+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~ 198 (340)
T 4aow_A 119 TTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVK 198 (340)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred ceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEE
Confidence 888888888899999999999999999999999999998865543322 2233567777654 5788999999999
Q ss_pred EEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 154 VFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 154 ~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+||+++.+.. .....|..+|++++|+|++++|++|+.
T Consensus 199 i~d~~~~~~~--~~~~~h~~~v~~~~~s~~~~~l~s~s~ 235 (340)
T 4aow_A 199 VWNLANCKLK--TNHIGHTGYLNTVTVSPDGSLCASGGK 235 (340)
T ss_dssp EEETTTTEEE--EEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEECCCCcee--eEecCCCCcEEEEEECCCCCEEEEEeC
Confidence 9999987642 334568889999999999999998863
No 58
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-32 Score=192.17 Aligned_cols=178 Identities=12% Similarity=0.114 Sum_probs=140.9
Q ss_pred CeeeEEEcC--CCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCC
Q 039044 2 SVSSLCFSP--KANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 2 ~v~~~~~~p--~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 79 (194)
+|.+++|+| +++++++++.||+|++||+.++.. .......+...+.+++|+|++++|++|+.||.|++||++++
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~----~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ----YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP 202 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCE----EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE----EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 589999999 999999999999999999987753 11122345667999999999999999999999999999999
Q ss_pred Cce-EEecc-CCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEe------cC--CeEEEEecCCCEEEEEcC-
Q 039044 80 GQP-VTVAM-HDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ------LP--DRCYALTVRYPLMVVGTA- 148 (194)
Q Consensus 80 ~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~------~~--~~~~~~~~~~~~l~~~~~- 148 (194)
+.+ ..+.. |..+|++++|+|++.+|++++ |+.|++||+++.+.+..+. .+ ..+++|+|+++++++++.
T Consensus 203 ~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~ 281 (343)
T 3lrv_A 203 DQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNE 281 (343)
T ss_dssp TSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETT
T ss_pred CCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCC
Confidence 887 77887 999999999999999999999 5599999999987654432 12 246999999999999988
Q ss_pred CCcEEEEECCCCCeeeEEeeCCCcceeeEEEEec---CCCeeEEE
Q 039044 149 DRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFP---DQQGFLVC 190 (194)
Q Consensus 149 dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p---~~~~l~~~ 190 (194)
|+.+++|++.+....... .++..+.|.| +.+.++++
T Consensus 282 d~~i~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~ 320 (343)
T 3lrv_A 282 SNSLTIYKFDKKTKNWTK------DEESALCLQSDTADFTDMDVV 320 (343)
T ss_dssp TTEEEEEEECTTTCSEEE------EEEEECCC----CCCCEEEEE
T ss_pred CCcEEEEEEcccccceEe------cCceeEecCccccccceeEEE
Confidence 999999999766543332 3445555555 55555444
No 59
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=7e-32 Score=192.12 Aligned_cols=186 Identities=10% Similarity=0.136 Sum_probs=155.8
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
+.|.+++|+|++++|++++.|+.|++||+..... ........|...+.+++|+|++++|++++.|+.|++||++.++
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW---KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE---EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCee---eeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 3689999999999999999999999999977642 1223345788999999999999999999999999999999877
Q ss_pred c---eEE-eccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCC------------------CCCceeEEec---CCeEEE
Q 039044 81 Q---PVT-VAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTR------------------QPNPVHTQQL---PDRCYA 135 (194)
Q Consensus 81 ~---~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~------------------~~~~~~~~~~---~~~~~~ 135 (194)
. ... ...|...|.+++|+|++++|++++.|+.|++||++ .++.+..+.. ...+++
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 209 (372)
T 1k8k_C 130 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVC 209 (372)
T ss_dssp TEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEE
T ss_pred cceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEE
Confidence 4 223 35688999999999999999999999999999964 4555555533 457889
Q ss_pred EecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 136 LTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 136 ~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
++|+++++++++.||.|++||+++.+.. ... ..+..++.+++|+|++++++++.
T Consensus 210 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~-~~~~~~v~~~~~~~~~~~l~~~~ 263 (372)
T 1k8k_C 210 FSANGSRVAWVSHDSTVCLADADKKMAV-ATL-ASETLPLLAVTFITESSLVAAGH 263 (372)
T ss_dssp ECSSSSEEEEEETTTEEEEEEGGGTTEE-EEE-ECSSCCEEEEEEEETTEEEEEET
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCcee-EEE-ccCCCCeEEEEEecCCCEEEEEe
Confidence 9999999999999999999999987643 333 34677899999999999988873
No 60
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=9.2e-33 Score=196.08 Aligned_cols=184 Identities=10% Similarity=0.102 Sum_probs=155.6
Q ss_pred CeeeEEEcCC----CCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEec-CCCeEEEecCCCeEEEEec
Q 039044 2 SVSSLCFSPK----ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD-DGTTVFSGGCDKQVKMWPL 76 (194)
Q Consensus 2 ~v~~~~~~p~----~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~~~d~ 76 (194)
.|++++|+|+ +++|++|+.||.|++||+.+... ...+..|..+|.+++|+| ++++|++++.||.|++||+
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~ 145 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQC-----IKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNI 145 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCE-----EEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceE-----eeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEe
Confidence 5899999998 67999999999999999987643 455668999999999999 8999999999999999999
Q ss_pred CCCCceEEe---ccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeE---------------------------
Q 039044 77 LSGGQPVTV---AMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT--------------------------- 126 (194)
Q Consensus 77 ~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~--------------------------- 126 (194)
++++.+..+ ..|...|.+++|+|++++|++++.|+.|++||+++++....
T Consensus 146 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (366)
T 3k26_A 146 QTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS 225 (366)
T ss_dssp TTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEE
T ss_pred ecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccc
Confidence 999888887 68999999999999999999999999999999997654322
Q ss_pred ----EecCCeEEEEecCCCEEEEEcCCCcEEEEECCCCCe------------eeEEeeCCCcceeeEEEEecC--CCeeE
Q 039044 127 ----QQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQT------------EFKRINSPLKYQTRCVAAFPD--QQGFL 188 (194)
Q Consensus 127 ----~~~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~------------~~~~~~~~~~~~v~~i~~~p~--~~~l~ 188 (194)
+.....+++++ ++++++++.||.|++||+++... ........+...+.+++|+|+ +++|+
T Consensus 226 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~ 303 (366)
T 3k26_A 226 TRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLA 303 (366)
T ss_dssp ECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEE
T ss_pred cccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEE
Confidence 22344577777 78999999999999999987653 222333457778999999999 99999
Q ss_pred EEEe
Q 039044 189 VCIH 192 (194)
Q Consensus 189 ~~~~ 192 (194)
++..
T Consensus 304 ~~~~ 307 (366)
T 3k26_A 304 LGNQ 307 (366)
T ss_dssp EECT
T ss_pred EEec
Confidence 8853
No 61
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.7e-32 Score=194.67 Aligned_cols=181 Identities=9% Similarity=0.057 Sum_probs=147.6
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCC-eEEEecCCCeEEEEecCC--
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT-TVFSGGCDKQVKMWPLLS-- 78 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~~~d~~~-- 78 (194)
.|.+++|+|++++|++|+.|+.|++||+... ....+..|...|.+++|+|+++ +|++++.|+.|++||+++
T Consensus 165 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~------~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 238 (383)
T 3ei3_B 165 WYCCVDVSVSRQMLATGDSTGRLLLLGLDGH------EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIK 238 (383)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTSC------EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCC
T ss_pred CeEEEEECCCCCEEEEECCCCCEEEEECCCC------EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCC
Confidence 5899999999999999999999999999432 2455668999999999999998 899999999999999987
Q ss_pred --CCceEEeccCCCcEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCCceeEEecC--------------------CeEEE
Q 039044 79 --GGQPVTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVHTQQLP--------------------DRCYA 135 (194)
Q Consensus 79 --~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~--------------------~~~~~ 135 (194)
+..+..+ .|...|.+++|+| ++++|++++.|+.|++||+++++....+..+ ...++
T Consensus 239 ~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 317 (383)
T 3ei3_B 239 DKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAG 317 (383)
T ss_dssp STTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEE
T ss_pred cccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEE
Confidence 4445555 6999999999999 9999999999999999999988766554421 11245
Q ss_pred EecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 136 LTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 136 ~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
++|++++ +++.||.|++||+++++.........+...+.+++|+|++++|++|+
T Consensus 318 ~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s 371 (383)
T 3ei3_B 318 RYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM 371 (383)
T ss_dssp CBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE
T ss_pred ecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec
Confidence 5566655 67789999999999887533322223566778889999999999986
No 62
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=9.1e-32 Score=208.60 Aligned_cols=185 Identities=18% Similarity=0.288 Sum_probs=161.7
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
+.|.+++|+|++++|++++.||.|++||+.++. ....+..|..+|.+++|+|++++|++++.||.|++||+.+++
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~-----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~ 88 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQV-----EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE 88 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-----EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEECCCCc-----eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 468999999999999999999999999998764 345666899999999999999999999999999999999999
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCC-CceeEEe---cCCeEEEEec-CCCEEEEEcCCCcEEEE
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP-NPVHTQQ---LPDRCYALTV-RYPLMVVGTADRNLVVF 155 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~-~~~~~~~---~~~~~~~~~~-~~~~l~~~~~dg~v~~~ 155 (194)
.+..+..|...|++++|+|++++|++++.||.|++||++++ .....+. ....+++|+| ++..+++++.||.|++|
T Consensus 89 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vw 168 (814)
T 3mkq_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168 (814)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 99999999999999999999999999999999999999876 3344443 3457889999 88999999999999999
Q ss_pred ECCCCCeeeEEeeCCCcceeeEEEEec--CCCeeEEEE
Q 039044 156 NLQNPQTEFKRINSPLKYQTRCVAAFP--DQQGFLVCI 191 (194)
Q Consensus 156 d~~~~~~~~~~~~~~~~~~v~~i~~~p--~~~~l~~~~ 191 (194)
|+++.... ......+...+.+++|+| ++..++++.
T Consensus 169 d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 169 SLGQSTPN-FTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp ETTCSSCS-EEEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred ECCCCcce-eEEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence 99877643 334444557899999999 999998875
No 63
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.4e-31 Score=191.04 Aligned_cols=189 Identities=13% Similarity=0.082 Sum_probs=155.6
Q ss_pred CCeeeEEEc----CCCCE-EEEeeCCCeEEEEeccc------CCcccccccccc-------cCCCCCeeEEEEecCCCeE
Q 039044 1 DSVSSLCFS----PKANI-LVATSWDNQVRCWEISR------GGTGVASVPKAS-------ISHDHPVLCSTWKDDGTTV 62 (194)
Q Consensus 1 ~~v~~~~~~----p~~~~-l~~~~~d~~i~i~~~~~------~~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l 62 (194)
+.|.+++|+ |+++. |++++.||.|++||+.. ...........+ ..|...+.+++|+|++ ++
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l 200 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LI 200 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EE
T ss_pred CcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eE
Confidence 368999999 99999 99999999999999987 432110000133 4578899999999999 99
Q ss_pred EEecCCCeEEEEecCCCCceEEecc---C---CCcEEEEEecCCCCEEEEeeCC---CeEEEEeCCCCCceeEEec----
Q 039044 63 FSGGCDKQVKMWPLLSGGQPVTVAM---H---DAPIKEVAWIPEMNLLATGSWD---KTLKYWDTRQPNPVHTQQL---- 129 (194)
Q Consensus 63 ~~~~~d~~i~~~d~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---~~v~vwd~~~~~~~~~~~~---- 129 (194)
++++.|+.|++||+++++.+..+.. | ...|.+++|+|++++|++++.| +.|++||+++++.+..+..
T Consensus 201 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~ 280 (397)
T 1sq9_A 201 ATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHS 280 (397)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC---
T ss_pred EEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccc
Confidence 9999999999999999988888888 8 9999999999999999999999 9999999999988777654
Q ss_pred ------------CCeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeC-----CC---------------cceeeE
Q 039044 130 ------------PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINS-----PL---------------KYQTRC 177 (194)
Q Consensus 130 ------------~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~-----~~---------------~~~v~~ 177 (194)
...+++|+|++++|++++.||.|++||+++.+.. ..+.. .| ...|.+
T Consensus 281 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~ 359 (397)
T 1sq9_A 281 SQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERI-TTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD 359 (397)
T ss_dssp -----CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE-EEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEE
T ss_pred ccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCcee-EEEecccCcccchhhhhccccccccccCCceeE
Confidence 3468899999999999999999999999987643 33331 34 788999
Q ss_pred EEEecCC----------CeeEEEE
Q 039044 178 VAAFPDQ----------QGFLVCI 191 (194)
Q Consensus 178 i~~~p~~----------~~l~~~~ 191 (194)
++|+|++ +.|+++.
T Consensus 360 ~~~~~~g~~~~~~~~~~~~l~s~~ 383 (397)
T 1sq9_A 360 VKFLKKGWRSGMGADLNESLCCVC 383 (397)
T ss_dssp EEEECTTTSBSTTCTTSCEEEEEE
T ss_pred EEeccccccccccccccceEEEec
Confidence 9999998 6888775
No 64
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-32 Score=196.70 Aligned_cols=191 Identities=13% Similarity=0.222 Sum_probs=159.3
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecC-CCeEEEecCCCeEEEEecCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDD-GTTVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~ 79 (194)
+.|++++|+|++++|++|+.||.|++|++....... .....+..|...|.+++|+|+ +++|++++.|+.|++||++++
T Consensus 68 ~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 146 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAI-NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKC 146 (416)
T ss_dssp SCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCC-CEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTT
T ss_pred CceEEEEECCCCCeEEEEccCCeEEEeecccccccc-cchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCC
Confidence 368999999999999999999999999998732100 134556689999999999998 899999999999999999987
Q ss_pred C------ceEE---eccCCCcEEEEEecCC-CCEEEEeeCCCeEEEEeCCCCCceeEEec---------CCeEEEEecCC
Q 039044 80 G------QPVT---VAMHDAPIKEVAWIPE-MNLLATGSWDKTLKYWDTRQPNPVHTQQL---------PDRCYALTVRY 140 (194)
Q Consensus 80 ~------~~~~---~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---------~~~~~~~~~~~ 140 (194)
+ .... +..|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+.. ...+++|+|++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 226 (416)
T 2pm9_A 147 TESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKN 226 (416)
T ss_dssp SSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSC
T ss_pred ccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCC
Confidence 6 3332 3678899999999998 78999999999999999999888777654 34688999997
Q ss_pred -CEEEEEcCCC---cEEEEECCCCCeeeEEeeCCCcceeeEEEEec-CCCeeEEEEe
Q 039044 141 -PLMVVGTADR---NLVVFNLQNPQTEFKRINSPLKYQTRCVAAFP-DQQGFLVCIH 192 (194)
Q Consensus 141 -~~l~~~~~dg---~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p-~~~~l~~~~~ 192 (194)
.++++++.|+ .|++||+++...+.......|...+.+++|+| ++++|+++..
T Consensus 227 ~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~ 283 (416)
T 2pm9_A 227 STRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR 283 (416)
T ss_dssp TTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES
T ss_pred CCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC
Confidence 6899999998 99999999875444434326788999999999 8999998864
No 65
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.6e-31 Score=198.38 Aligned_cols=180 Identities=25% Similarity=0.332 Sum_probs=154.5
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
+|.+++|+|+++.|++++.|+.+++|+.... .......|...|.+++|+|++++|++++.|+.|++||. +++.
T Consensus 346 ~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~------~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~ 418 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQ------LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQL 418 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTCC------EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCE
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEcCCCC------EEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCE
Confidence 6889999999999999999999999996432 24556689999999999999999999999999999995 5677
Q ss_pred eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecCCCEEEEEcCCCcEEEEECC
Q 039044 82 PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTADRNLVVFNLQ 158 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~dg~v~~~d~~ 158 (194)
+..+..|...|++++|+|++++|++++.|+.|++||.. ++.+..+.. ...+++|+|++++|++++.|+.|++||..
T Consensus 419 ~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~ 497 (577)
T 2ymu_A 419 LQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 497 (577)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred EEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC
Confidence 78889999999999999999999999999999999964 555555443 45789999999999999999999999964
Q ss_pred CCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 159 NPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 159 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++ .... ...|...|++++|+|++++|+++..
T Consensus 498 -~~-~~~~-~~~h~~~v~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 498 -GQ-LLQT-LTGHSSSVRGVAFSPDGQTIASASD 528 (577)
T ss_dssp -SC-EEEE-EECCSSCEEEEEECTTSSCEEEEET
T ss_pred -CC-EEEE-EeCCCCCEEEEEEcCCCCEEEEEEC
Confidence 33 2333 3458889999999999999998864
No 66
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-31 Score=195.56 Aligned_cols=183 Identities=11% Similarity=0.072 Sum_probs=153.9
Q ss_pred CeeeEEEcCCCCEE-EEeeCCCeEEEEecc--cCCcccccccccc--cCCCCCeeEEEEecCCCeEEEecCCCeEEEEec
Q 039044 2 SVSSLCFSPKANIL-VATSWDNQVRCWEIS--RGGTGVASVPKAS--ISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPL 76 (194)
Q Consensus 2 ~v~~~~~~p~~~~l-~~~~~d~~i~i~~~~--~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~ 76 (194)
.|++++|+|++++| ++|+.||.|++|++. .+.. ...+ ..+...+.+++|+|++++|++|+.+|.|++|++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~-----~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV-----LKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC-----EEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce-----eeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEec
Confidence 59999999999996 899999999999998 5432 2222 257789999999999999999999999999999
Q ss_pred CCCCceE----EeccCCCcEEEEEecCC---CCEEEEeeCCCeEEEEeCCCCCceeEEe----cCCeEEEEecCCCEEEE
Q 039044 77 LSGGQPV----TVAMHDAPIKEVAWIPE---MNLLATGSWDKTLKYWDTRQPNPVHTQQ----LPDRCYALTVRYPLMVV 145 (194)
Q Consensus 77 ~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~v~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~l~~ 145 (194)
.+++... .+.+|...|++++|+|+ +++|++++.|+.|++||+++++.+..+. ....+++|+ ++++|++
T Consensus 179 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s 257 (450)
T 2vdu_B 179 NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLS 257 (450)
T ss_dssp TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEE
T ss_pred CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEE
Confidence 8877554 67789999999999999 9999999999999999999988776632 345788999 9999999
Q ss_pred EcCCCcEEEEECCCCCeeeEEeeC------------------------CCcceeeEEEEecCCCeeEEEE
Q 039044 146 GTADRNLVVFNLQNPQTEFKRINS------------------------PLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 146 ~~~dg~v~~~d~~~~~~~~~~~~~------------------------~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
++.|+.|++||+++++... .+.. .....+.+++|+|++++++++.
T Consensus 258 ~~~d~~v~vwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 258 AGGDDKIFAWDWKTGKNLS-TFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp EESSSEEEEEETTTCCEEE-EEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred EeCCCeEEEEECCCCcEee-eecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 9999999999999876432 2221 2345689999999999999886
No 67
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-32 Score=196.75 Aligned_cols=190 Identities=11% Similarity=0.057 Sum_probs=150.2
Q ss_pred CCeeeEEEcC-CCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecC--
Q 039044 1 DSVSSLCFSP-KANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLL-- 77 (194)
Q Consensus 1 ~~v~~~~~~p-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~-- 77 (194)
++|++++|+| ++++|++|+.||+|++||+................|..+|.+++|+|++++|++++.||.|++||++
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~ 143 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHY 143 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccc
Confidence 4799999999 9999999999999999999772111101112233589999999999999999999999999999995
Q ss_pred -CCCceEEecc------------CCCcEEEEE--ecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec-----CCeEEEEe
Q 039044 78 -SGGQPVTVAM------------HDAPIKEVA--WIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL-----PDRCYALT 137 (194)
Q Consensus 78 -~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~-----~~~~~~~~ 137 (194)
.++....+.. +...+.++. +++++.+|++++.|+.|++||+++++.+..+.. ...+++|+
T Consensus 144 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s 223 (437)
T 3gre_A 144 QQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICID 223 (437)
T ss_dssp EETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEEC
T ss_pred cCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEEC
Confidence 5544433322 445566666 557899999999999999999999998877764 34788999
Q ss_pred cCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEe----cCCCeeEEEE
Q 039044 138 VRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAF----PDQQGFLVCI 191 (194)
Q Consensus 138 ~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~----p~~~~l~~~~ 191 (194)
|+++++++|+.||.|++||+++.+ +.......+..+|.+++|+ |++.++++|+
T Consensus 224 ~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~ 280 (437)
T 3gre_A 224 EECCVLILGTTRGIIDIWDIRFNV-LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGS 280 (437)
T ss_dssp TTSCEEEEEETTSCEEEEETTTTE-EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEES
T ss_pred CCCCEEEEEcCCCeEEEEEcCCcc-EEEEEecCCCCceEEEEeccccCCCccEEEEEc
Confidence 999999999999999999999865 3444444577899999555 5677888874
No 68
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-32 Score=208.21 Aligned_cols=189 Identities=18% Similarity=0.233 Sum_probs=159.4
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecC--CCeEEEecCCCeEEEEecCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDD--GTTVFSGGCDKQVKMWPLLS 78 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~~~d~~~ 78 (194)
++|++++|+|++++|++|+.||.|++|++..... .......+|..+|.+++|+|+ +++|++|+.||.|++||+.+
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~---~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~ 86 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH---KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 86 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE---EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEET
T ss_pred ceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC---ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCC
Confidence 4799999999999999999999999999985432 334566789999999999988 99999999999999999998
Q ss_pred CC--ceEEeccCCCcEEEEEecCC--CCEEEEeeCCCeEEEEeCCCCCce--eEE---ecCCeEEEEec-----------
Q 039044 79 GG--QPVTVAMHDAPIKEVAWIPE--MNLLATGSWDKTLKYWDTRQPNPV--HTQ---QLPDRCYALTV----------- 138 (194)
Q Consensus 79 ~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~vwd~~~~~~~--~~~---~~~~~~~~~~~----------- 138 (194)
++ .+..+..|...|++++|+|+ ++++++++.||.|++||++++... ... .....+++++|
T Consensus 87 ~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~ 166 (753)
T 3jro_A 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 166 (753)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------
T ss_pred CcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccccc
Confidence 86 56677889999999999998 999999999999999999887432 222 23457888998
Q ss_pred --CCCEEEEEcCCCcEEEEECCCCCee--eEEeeCCCcceeeEEEEecC---CCeeEEEEe
Q 039044 139 --RYPLMVVGTADRNLVVFNLQNPQTE--FKRINSPLKYQTRCVAAFPD---QQGFLVCIH 192 (194)
Q Consensus 139 --~~~~l~~~~~dg~v~~~d~~~~~~~--~~~~~~~~~~~v~~i~~~p~---~~~l~~~~~ 192 (194)
++..+++|+.||.|++||+++.... .......|...|.+++|+|+ ++.+++|..
T Consensus 167 ~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 167 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred CCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 5899999999999999999876532 22334568899999999999 888888863
No 69
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.7e-31 Score=189.11 Aligned_cols=185 Identities=18% Similarity=0.270 Sum_probs=150.7
Q ss_pred CCeeeEEEcCCCCEE-EEeeC---CCeEEEEecccCCcccccccccccCCCCCeeEEEEecC---CCeEEEecCCCeEEE
Q 039044 1 DSVSSLCFSPKANIL-VATSW---DNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDD---GTTVFSGGCDKQVKM 73 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l-~~~~~---d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~d~~i~~ 73 (194)
++|++++|+|+++.+ ++|+. |+.|++|++.++.. ......+|..+|.+++|+|+ +++|++|+.||.|++
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i 94 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL----KLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHI 94 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE----EEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEE
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc----cceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEE
Confidence 479999999998654 56665 99999999987652 22333478899999999998 699999999999999
Q ss_pred EecCCCC-ceEEeccCCCcEEEEE------ecCCCCEEEEeeCCCeEEEEeCCCCC-ceeEEec-------CCeEEE---
Q 039044 74 WPLLSGG-QPVTVAMHDAPIKEVA------WIPEMNLLATGSWDKTLKYWDTRQPN-PVHTQQL-------PDRCYA--- 135 (194)
Q Consensus 74 ~d~~~~~-~~~~~~~~~~~v~~~~------~~~~~~~l~~~~~d~~v~vwd~~~~~-~~~~~~~-------~~~~~~--- 135 (194)
||+.+++ .+..+..|...|.+++ |+|++++|++++.|+.|++||+++++ ++..+.. ...+++
T Consensus 95 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 174 (357)
T 3i2n_A 95 WNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGN 174 (357)
T ss_dssp ECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEEC
T ss_pred EeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEe
Confidence 9999988 7888999999999995 56889999999999999999999887 5665533 234455
Q ss_pred -EecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEec---CCCeeEEEEe
Q 039044 136 -LTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFP---DQQGFLVCIH 192 (194)
Q Consensus 136 -~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p---~~~~l~~~~~ 192 (194)
++|+++++++++.||.|++||+++.+.... ..+...+.+++|+| ++..++++..
T Consensus 175 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~l~~~~~ 232 (357)
T 3i2n_A 175 AYNQEERVVCAGYDNGDIKLFDLRNMALRWE---TNIKNGVCSLEFDRKDISMNKLVATSL 232 (357)
T ss_dssp CCC-CCCEEEEEETTSEEEEEETTTTEEEEE---EECSSCEEEEEESCSSSSCCEEEEEES
T ss_pred ccCCCCCEEEEEccCCeEEEEECccCceeee---cCCCCceEEEEcCCCCCCCCEEEEECC
Confidence 568999999999999999999998764222 34678899999999 8999998863
No 70
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.4e-31 Score=190.94 Aligned_cols=185 Identities=22% Similarity=0.326 Sum_probs=157.5
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.|.+++| +++.|++|+.||.|++||+.... ........|...|.+++|+|++++|++|+.|+.|++||+++++.
T Consensus 178 ~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 251 (401)
T 4aez_A 178 RVGCLSW--NRHVLSSGSRSGAIHHHDVRIAN----HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP 251 (401)
T ss_dssp CEEEEEE--ETTEEEEEETTSEEEEEETTSSS----CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE
T ss_pred ceEEEEE--CCCEEEEEcCCCCEEEEecccCc----ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc
Confidence 6888999 45799999999999999998543 23455678999999999999999999999999999999999999
Q ss_pred eEEeccCCCcEEEEEecCCCC-EEEEee--CCCeEEEEeCCCCCceeEEecC--CeEEEEecCCCEEEE--EcCCCcEEE
Q 039044 82 PVTVAMHDAPIKEVAWIPEMN-LLATGS--WDKTLKYWDTRQPNPVHTQQLP--DRCYALTVRYPLMVV--GTADRNLVV 154 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~d~~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~l~~--~~~dg~v~~ 154 (194)
+..+..|...|.+++|+|++. ++++++ .|+.|++||+++++.+..+... ...++|+|+++.+++ |+.||.|++
T Consensus 252 ~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v 331 (401)
T 4aez_A 252 KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSI 331 (401)
T ss_dssp EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEE
T ss_pred cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEE
Confidence 888999999999999999764 555554 7999999999999988777653 568899999999999 558999999
Q ss_pred EECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 155 FNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 155 ~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
||+++.+.........|...|.+++|+|++++|+++..
T Consensus 332 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~ 369 (401)
T 4aez_A 332 WSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAAS 369 (401)
T ss_dssp EEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECT
T ss_pred EecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeC
Confidence 99998654444334568889999999999999998753
No 71
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=5.4e-31 Score=191.48 Aligned_cols=190 Identities=17% Similarity=0.307 Sum_probs=154.2
Q ss_pred CCeeeEEEcCC-CCEEEEeeCCCeEEEEecccCCcc-----cccccccccCCCCCeeEEEEecCCC-eEEEecCCCeEEE
Q 039044 1 DSVSSLCFSPK-ANILVATSWDNQVRCWEISRGGTG-----VASVPKASISHDHPVLCSTWKDDGT-TVFSGGCDKQVKM 73 (194)
Q Consensus 1 ~~v~~~~~~p~-~~~l~~~~~d~~i~i~~~~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~~ 73 (194)
+.|++++|+|+ +.+|++++.||.|++|++...... .......+..|...+.+++|+|++. +|++|+.||.|++
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 208 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICL 208 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEE
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEE
Confidence 46899999997 689999999999999999863110 0123455668999999999999988 9999999999999
Q ss_pred EecCCCCc-------eEEeccCCCcEEEEEecC-CCCEEEEeeCCCeEEEEeCCCC---CceeEEe---cCCeEEEEecC
Q 039044 74 WPLLSGGQ-------PVTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQP---NPVHTQQ---LPDRCYALTVR 139 (194)
Q Consensus 74 ~d~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~vwd~~~~---~~~~~~~---~~~~~~~~~~~ 139 (194)
|++..+.. ...+..|...|.+++|+| ++.+|++++.|+.|++||+++. +.+..+. ....+++|+|+
T Consensus 209 wd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~ 288 (430)
T 2xyi_A 209 WDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPY 288 (430)
T ss_dssp EETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSS
T ss_pred EeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCC
Confidence 99987432 345678999999999999 7789999999999999999987 3444443 34578999998
Q ss_pred CC-EEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCe-eEEEE
Q 039044 140 YP-LMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQG-FLVCI 191 (194)
Q Consensus 140 ~~-~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~-l~~~~ 191 (194)
++ .+++|+.||.|++||+++...+...+. .|...|.+++|+|+++. |+++.
T Consensus 289 ~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~ 341 (430)
T 2xyi_A 289 SEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSG 341 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTTEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCCEEEEEe
Confidence 87 688999999999999998654444443 47889999999999975 55553
No 72
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=3.9e-32 Score=195.38 Aligned_cols=186 Identities=8% Similarity=0.073 Sum_probs=138.7
Q ss_pred CCeeeEEEcC--------CCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCC-CeEEEecCCCeE
Q 039044 1 DSVSSLCFSP--------KANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDG-TTVFSGGCDKQV 71 (194)
Q Consensus 1 ~~v~~~~~~p--------~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i 71 (194)
+.|++++|+| ++++||+|+.|++|+|||+.+... ......|..++.+++|+|++ ++|++++.|+.|
T Consensus 137 ~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~-----~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v 211 (393)
T 4gq1_A 137 NFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP-----ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNI 211 (393)
T ss_dssp SCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE-----EEEEEECSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred CceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce-----eeeecCCCCCcEEEEECCCCCceEEecCCCCEE
Confidence 4689999998 789999999999999999987642 45566788999999999987 489999999999
Q ss_pred EEEecCCCCceEE-------------------------eccCCCcEEEEEec-CCCCEEEEeeCCCeEEEEeCCCCCcee
Q 039044 72 KMWPLLSGGQPVT-------------------------VAMHDAPIKEVAWI-PEMNLLATGSWDKTLKYWDTRQPNPVH 125 (194)
Q Consensus 72 ~~~d~~~~~~~~~-------------------------~~~~~~~v~~~~~~-~~~~~l~~~~~d~~v~vwd~~~~~~~~ 125 (194)
++||+++++.... ..+|...+.++.|. |+++.+++++.|+.+++||++.++...
T Consensus 212 ~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~ 291 (393)
T 4gq1_A 212 RIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYN 291 (393)
T ss_dssp EEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------
T ss_pred EEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCc
Confidence 9999987654322 13567788899987 799999999999999999998765443
Q ss_pred EEecC---------------------CeEEEEec--CCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEec
Q 039044 126 TQQLP---------------------DRCYALTV--RYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFP 182 (194)
Q Consensus 126 ~~~~~---------------------~~~~~~~~--~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p 182 (194)
.+..+ .....+.+ ++.++++|+.||.|++||+.+++..... ..+..+|++++|+|
T Consensus 292 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~--~~~~~~V~svafsp 369 (393)
T 4gq1_A 292 EISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIP--IQLGMPIVDFCWHQ 369 (393)
T ss_dssp ------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEE--EECSSCEEEEEECT
T ss_pred eEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEe--cCCCCcEEEEEEcC
Confidence 32211 01223333 3446778889999999999987654332 34667899999999
Q ss_pred CCCeeEEEEee
Q 039044 183 DQQGFLVCIHL 193 (194)
Q Consensus 183 ~~~~l~~~~~~ 193 (194)
||++|++++++
T Consensus 370 dG~~LA~as~~ 380 (393)
T 4gq1_A 370 DGSHLAIATEG 380 (393)
T ss_dssp TSSEEEEEESS
T ss_pred CCCEEEEEeCC
Confidence 99999999763
No 73
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.1e-31 Score=189.22 Aligned_cols=186 Identities=21% Similarity=0.311 Sum_probs=155.8
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCC-eEEEecCCCeEEEEec-CC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT-TVFSGGCDKQVKMWPL-LS 78 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~~~d~-~~ 78 (194)
+.|++++|+|++++|++++.|+.|++|++...... ........|...|.+++|+|+++ +|++|+.||.|++||+ .+
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 89 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN--VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGS 89 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE--EEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSS
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc--ccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccC
Confidence 47999999999999999999999999999876521 11234457899999999999999 9999999999999999 76
Q ss_pred CCceEEecc--CCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCC---------CCceeEEec--CCeEEEEecCCCEEEE
Q 039044 79 GGQPVTVAM--HDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ---------PNPVHTQQL--PDRCYALTVRYPLMVV 145 (194)
Q Consensus 79 ~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~---------~~~~~~~~~--~~~~~~~~~~~~~l~~ 145 (194)
++ ...+.. |...|.+++|+| ++++++++.|+.|++||+++ ++++..+.. ...++++++++ +++
T Consensus 90 ~~-~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~ 165 (342)
T 1yfq_A 90 PS-FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIV 165 (342)
T ss_dssp SS-EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEE
T ss_pred Cc-eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEE
Confidence 64 467778 999999999999 99999999999999999987 665554443 34566676665 999
Q ss_pred EcCCCcEEEEECCC-CCeeeEEeeCCCcceeeEEEEec-CCCeeEEEEe
Q 039044 146 GTADRNLVVFNLQN-PQTEFKRINSPLKYQTRCVAAFP-DQQGFLVCIH 192 (194)
Q Consensus 146 ~~~dg~v~~~d~~~-~~~~~~~~~~~~~~~v~~i~~~p-~~~~l~~~~~ 192 (194)
++.++.|++||+++ ...........+...+.+++|+| +++.++++..
T Consensus 166 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 214 (342)
T 1yfq_A 166 GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI 214 (342)
T ss_dssp EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET
T ss_pred EeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEec
Confidence 99999999999998 66545555566888999999999 9999998864
No 74
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-31 Score=208.87 Aligned_cols=182 Identities=10% Similarity=0.078 Sum_probs=151.3
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
+.|++++|+|++++||+|+.||+|++|+...... .....|..+|.+++|+| +++|++++.|+.|++||+++++
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~------~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEV------VIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEE------EEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCS
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEE------EEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCc
Confidence 4699999999999999999999999999865431 22235788999999999 8899999999999999999998
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCcee--------------EEecCCeEEEEecC-CCEEEE
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVH--------------TQQLPDRCYALTVR-YPLMVV 145 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~--------------~~~~~~~~~~~~~~-~~~l~~ 145 (194)
.+..+. |...|++++|+|+++++++++.||.|++||+++++... .+...+.+++|+|+ +..+++
T Consensus 91 ~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~ 169 (902)
T 2oaj_A 91 VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI 169 (902)
T ss_dssp EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE
T ss_pred EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEE
Confidence 888876 77899999999999999999999999999999876431 12235678999996 478999
Q ss_pred EcCCCcEEEEECCCCCeeeEEeeC-----------------CCcceeeEEEEecCCCeeEEEEe
Q 039044 146 GTADRNLVVFNLQNPQTEFKRINS-----------------PLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 146 ~~~dg~v~~~d~~~~~~~~~~~~~-----------------~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
|+.||.| +||+++.+.. ..+.. .|...|.+++|+|+|++|++++.
T Consensus 170 g~~dg~v-lWd~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~ 231 (902)
T 2oaj_A 170 SYEYVTL-TYSLVENEIK-QSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE 231 (902)
T ss_dssp ECSSCEE-EEETTTTEEE-EEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET
T ss_pred EeCCCcE-EEECCCCceE-EEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC
Confidence 9999999 9999987532 22221 13467999999999999999864
No 75
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.5e-32 Score=192.55 Aligned_cols=185 Identities=17% Similarity=0.298 Sum_probs=151.7
Q ss_pred CCeeeEEEcC-CCCEEEEeeCCCeEEEEecccCCcccccccccc---cCCCCCeeEEEEecCCCeEEEecCCCeEEEEec
Q 039044 1 DSVSSLCFSP-KANILVATSWDNQVRCWEISRGGTGVASVPKAS---ISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPL 76 (194)
Q Consensus 1 ~~v~~~~~~p-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~ 76 (194)
++|.+++|+| ++++|++|+.||.|++||+..+.. .... ..|...|.+++|+|++++|++++.||.|++||+
T Consensus 116 ~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~ 190 (366)
T 3k26_A 116 NAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL-----VAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRI 190 (366)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE-----EEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred CcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE-----EEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEEC
Confidence 3689999999 899999999999999999987642 2232 579999999999999999999999999999999
Q ss_pred CCCCceEEec----------------------------cCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc-----
Q 039044 77 LSGGQPVTVA----------------------------MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP----- 123 (194)
Q Consensus 77 ~~~~~~~~~~----------------------------~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~----- 123 (194)
++++....+. .|...|.+++|+ ++++++++.|+.|++||+++.+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 268 (366)
T 3k26_A 191 NSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKI 268 (366)
T ss_dssp CSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGC
T ss_pred CCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCcccccccc
Confidence 8765443333 389999999998 67999999999999999987654
Q ss_pred ---------eeEEec---CCeEEEEecC--CCEEEEEcCCCcEEEEECCCCCee--eEEeeCCC--cceeeEEEEecCCC
Q 039044 124 ---------VHTQQL---PDRCYALTVR--YPLMVVGTADRNLVVFNLQNPQTE--FKRINSPL--KYQTRCVAAFPDQQ 185 (194)
Q Consensus 124 ---------~~~~~~---~~~~~~~~~~--~~~l~~~~~dg~v~~~d~~~~~~~--~~~~~~~~--~~~v~~i~~~p~~~ 185 (194)
+..+.. ...+++++|+ +++|++++.||.|++||+++.+.. .......+ ...|.+++|+|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 348 (366)
T 3k26_A 269 KPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSS 348 (366)
T ss_dssp CTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSS
T ss_pred ccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCC
Confidence 333332 3467889998 999999999999999999986532 11122334 68999999999999
Q ss_pred eeEEEEe
Q 039044 186 GFLVCIH 192 (194)
Q Consensus 186 ~l~~~~~ 192 (194)
+|+++..
T Consensus 349 ~l~s~~~ 355 (366)
T 3k26_A 349 ILIAVCD 355 (366)
T ss_dssp EEEEEET
T ss_pred eEEEEeC
Confidence 9999864
No 76
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.1e-30 Score=189.86 Aligned_cols=190 Identities=21% Similarity=0.257 Sum_probs=154.4
Q ss_pred CeeeEEEcCCCC-EEEEeeCCCeEEEEecccCCcc--cccccccccCCCCCeeEEEEec-CCCeEEEecCCCeEEEEecC
Q 039044 2 SVSSLCFSPKAN-ILVATSWDNQVRCWEISRGGTG--VASVPKASISHDHPVLCSTWKD-DGTTVFSGGCDKQVKMWPLL 77 (194)
Q Consensus 2 ~v~~~~~~p~~~-~l~~~~~d~~i~i~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~~~d~~ 77 (194)
.|++++|+|++. +|++|+.||.|++|++...... ..........|...|.+++|+| ++.+|++++.|+.|++||++
T Consensus 183 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~ 262 (430)
T 2xyi_A 183 EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR 262 (430)
T ss_dssp CCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred CeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 588999999988 9999999999999999874321 1112344567999999999999 67889999999999999999
Q ss_pred CC---CceEEeccCCCcEEEEEecCCCC-EEEEeeCCCeEEEEeCCC-CCceeEEe---cCCeEEEEecCCC-EEEEEcC
Q 039044 78 SG---GQPVTVAMHDAPIKEVAWIPEMN-LLATGSWDKTLKYWDTRQ-PNPVHTQQ---LPDRCYALTVRYP-LMVVGTA 148 (194)
Q Consensus 78 ~~---~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~vwd~~~-~~~~~~~~---~~~~~~~~~~~~~-~l~~~~~ 148 (194)
++ +.+..+..|...|++++|+|++. ++++++.||.|++||+++ .+++..+. ....+++|+|+++ .+++++.
T Consensus 263 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~ 342 (430)
T 2xyi_A 263 NNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGT 342 (430)
T ss_dssp CSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEET
T ss_pred CCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeC
Confidence 87 46677888999999999999887 688999999999999998 44555554 3457889999985 6999999
Q ss_pred CCcEEEEECCCCCe------------eeEEeeCCCcceeeEEEEecCCC-eeEEEE
Q 039044 149 DRNLVVFNLQNPQT------------EFKRINSPLKYQTRCVAAFPDQQ-GFLVCI 191 (194)
Q Consensus 149 dg~v~~~d~~~~~~------------~~~~~~~~~~~~v~~i~~~p~~~-~l~~~~ 191 (194)
||.|++||++.... ........|...|++++|+|+++ .++++.
T Consensus 343 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s 398 (430)
T 2xyi_A 343 DRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS 398 (430)
T ss_dssp TSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE
T ss_pred CCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE
Confidence 99999999987321 22334456788899999999999 565554
No 77
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-30 Score=187.59 Aligned_cols=181 Identities=18% Similarity=0.256 Sum_probs=153.9
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCC-C
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLS-G 79 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~-~ 79 (194)
+.|++++|+|++++|++|+.||.|++||+.++.. ......|...|.+++|+ ++.+++++.||.|++||++. +
T Consensus 135 ~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~ 207 (401)
T 4aez_A 135 TYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTK-----LRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIAN 207 (401)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-----EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS
T ss_pred CCEEEEEECCCCCEEEEECCCCeEEEEECcCCeE-----EEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCc
Confidence 3689999999999999999999999999987743 45566899999999994 57999999999999999984 5
Q ss_pred CceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecCC-CEEEEEc--CCCcEE
Q 039044 80 GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVRY-PLMVVGT--ADRNLV 153 (194)
Q Consensus 80 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~-~~l~~~~--~dg~v~ 153 (194)
.....+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+.. ...+++|+|++ ..+++++ .|+.|+
T Consensus 208 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~ 287 (401)
T 4aez_A 208 HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIH 287 (401)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEE
Confidence 55677889999999999999999999999999999999999888776643 45789999976 4566654 799999
Q ss_pred EEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 154 VFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 154 ~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
+||+++++.. .... +...+.+++|+|+++.++++.
T Consensus 288 i~d~~~~~~~-~~~~--~~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 288 FWNAATGARV-NTVD--AGSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp EEETTTCCEE-EEEE--CSSCEEEEEECSSSSEEEEEE
T ss_pred EEECCCCCEE-EEEe--CCCcEEEEEECCCCCeEEEEe
Confidence 9999987643 3332 557899999999999999854
No 78
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.8e-31 Score=189.97 Aligned_cols=188 Identities=10% Similarity=0.106 Sum_probs=154.9
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcc-cccccccccCCCCCeeEEEEecC----C---CeEEEecCCCeEE
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTG-VASVPKASISHDHPVLCSTWKDD----G---TTVFSGGCDKQVK 72 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~----~---~~l~~~~~d~~i~ 72 (194)
++|++++|+| ++|++|+.||.|++|++...... ..........|..+|.+++|+|+ + ++|++++.|+.|+
T Consensus 17 ~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~ 94 (397)
T 1sq9_A 17 ADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLL 94 (397)
T ss_dssp SCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEE
T ss_pred cCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEE
Confidence 4799999999 89999999999999999887511 01234556689999999999999 9 9999999999999
Q ss_pred EEecCCCCc-----eEEeccC-----CCcEEEEEec----CCCCE-EEEeeCCCeEEEEeCCC------CCcee-----E
Q 039044 73 MWPLLSGGQ-----PVTVAMH-----DAPIKEVAWI----PEMNL-LATGSWDKTLKYWDTRQ------PNPVH-----T 126 (194)
Q Consensus 73 ~~d~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~d~~v~vwd~~~------~~~~~-----~ 126 (194)
+||+.+++. ...+..| ...|.+++|+ |++++ |++++.|+.|++||+++ ++.+. .
T Consensus 95 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 174 (397)
T 1sq9_A 95 FYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLE 174 (397)
T ss_dssp EEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEE
T ss_pred EEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcce
Confidence 999998887 7888888 5899999999 99999 99999999999999998 66554 5
Q ss_pred E----------ecCCeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeC--CC---cceeeEEEEecCCCeeEEEE
Q 039044 127 Q----------QLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINS--PL---KYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 127 ~----------~~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~--~~---~~~v~~i~~~p~~~~l~~~~ 191 (194)
+ .....+++++|++ .+++++.||.|++||+++.+.. ..... .| ...+.+++|+|++++|+++.
T Consensus 175 ~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~ 252 (397)
T 1sq9_A 175 LQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPL-YNFESQHSMINNSNSIRSVKFSPQGSLLAIAH 252 (397)
T ss_dssp EEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEE-EEEECCC---CCCCCEEEEEECSSTTEEEEEE
T ss_pred eeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCcee-EEEeccccccccCCccceEEECCCCCEEEEEe
Confidence 4 3345789999999 9999999999999999986533 33322 15 78899999999999999886
Q ss_pred e
Q 039044 192 H 192 (194)
Q Consensus 192 ~ 192 (194)
.
T Consensus 253 ~ 253 (397)
T 1sq9_A 253 D 253 (397)
T ss_dssp E
T ss_pred c
Confidence 5
No 79
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-31 Score=194.39 Aligned_cols=176 Identities=9% Similarity=0.090 Sum_probs=143.5
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCC-----CeeEEEEecCCCeEEEecCCCeEEEEe
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDH-----PVLCSTWKDDGTTVFSGGCDKQVKMWP 75 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~d~~i~~~d 75 (194)
+.|.+++|+|+|..||+++.||.|++|+... ...... |.. .+.+++|+|||++|++|+.||+|++||
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFS 157 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTSCEEEEETTE-------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-------eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEE
Confidence 4699999999999999999999999999533 122223 443 599999999999999999999999999
Q ss_pred cCCCCc-------eEEe----ccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce---eEEe----cCCeEEEEe
Q 039044 76 LLSGGQ-------PVTV----AMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV---HTQQ----LPDRCYALT 137 (194)
Q Consensus 76 ~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~---~~~~----~~~~~~~~~ 137 (194)
+.++.. +..+ .+|...|.+++|+|+| +++++.|+.|++||+...+.. +++. ..+..++|+
T Consensus 158 ~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 158 IRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV 235 (588)
T ss_dssp CCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE
T ss_pred CCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE
Confidence 998753 4555 6677899999999999 788899999999999877742 3332 235678888
Q ss_pred cCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEE--ecCCCeeEEEE
Q 039044 138 VRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAA--FPDQQGFLVCI 191 (194)
Q Consensus 138 ~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~--~p~~~~l~~~~ 191 (194)
++.+++++ ++.|++||+.+.+.. ....+|...+..++| +|++..++++.
T Consensus 236 --g~~LASa~-~~tIkLWd~~~~~~~--~~~~gh~~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 236 --DYKVVLTC-PGYVHKIDLKNYSIS--SLKTGSLENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp --TTEEEEEC-SSEEEEEETTTTEEE--EEECSCCSCCCEEEETTCSSCEEEEECS
T ss_pred --CCEEEEEe-CCeEEEEECCCCeEE--EEEcCCCceEEEEEeeeCCCCCEEEEEc
Confidence 68999887 699999999986542 233368899999999 99999998876
No 80
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.9e-32 Score=194.00 Aligned_cols=187 Identities=14% Similarity=0.204 Sum_probs=153.1
Q ss_pred CeeeEEEcCCCC-EEEEe----------eCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCe
Q 039044 2 SVSSLCFSPKAN-ILVAT----------SWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQ 70 (194)
Q Consensus 2 ~v~~~~~~p~~~-~l~~~----------~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 70 (194)
.|.+++|+|+++ +|++| +.|+.|++|++..... ........|...|.+++|+|++++|++++.||.
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADS---EKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGG---CSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCC---CcEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence 578999999986 99999 8899999999987642 112333468899999999999999999999999
Q ss_pred EEEEecCC----CCceEEeccCCCcEEEEEecCC-CCEEEEeeCCCeEEEEeCCCCC------ceeE------EecCCeE
Q 039044 71 VKMWPLLS----GGQPVTVAMHDAPIKEVAWIPE-MNLLATGSWDKTLKYWDTRQPN------PVHT------QQLPDRC 133 (194)
Q Consensus 71 i~~~d~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~vwd~~~~~------~~~~------~~~~~~~ 133 (194)
|++||+.. .+.+..+..|...|++++|+|+ +++|++++.|+.|++||+++.+ .... +.....+
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVIS 170 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCE
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeE
Confidence 99999987 3467778899999999999998 8999999999999999999876 2222 2335578
Q ss_pred EEEecC-CCEEEEEcCCCcEEEEECCCCCeeeEEeeCC-----CcceeeEEEEecCC-CeeEEEEe
Q 039044 134 YALTVR-YPLMVVGTADRNLVVFNLQNPQTEFKRINSP-----LKYQTRCVAAFPDQ-QGFLVCIH 192 (194)
Q Consensus 134 ~~~~~~-~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~-----~~~~v~~i~~~p~~-~~l~~~~~ 192 (194)
++|+|+ +..+++++.||.|++||+++.+.. ...... +...+.+++|+|++ ..++++..
T Consensus 171 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 235 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSSNFASIWDLKAKKEV-IHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATG 235 (416)
T ss_dssp EEECSSCTTEEEEESSSSCEEEEETTTTEEE-EEECCCCCSSCCCCCEEEEEECSSCTTEEEEEEC
T ss_pred EEeCCCCCcEEEEEcCCCCEEEEECCCCCcc-eEEeccccccccCCceEEEEECCCCCCEEEEEEC
Confidence 999998 789999999999999999987643 333222 16789999999998 56776653
No 81
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=3.9e-30 Score=184.96 Aligned_cols=191 Identities=13% Similarity=0.183 Sum_probs=157.7
Q ss_pred CCeeeEEEcC-CCCEEEEeeCCCeEEEEecccCCcccccc--------cccccCCCCCeeEEEEec-CCCeEEEecCCCe
Q 039044 1 DSVSSLCFSP-KANILVATSWDNQVRCWEISRGGTGVASV--------PKASISHDHPVLCSTWKD-DGTTVFSGGCDKQ 70 (194)
Q Consensus 1 ~~v~~~~~~p-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~--------~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~ 70 (194)
++|++++|+| ++++|++|+.||.|++|++.......... ......|...|.+++|+| ++++|++++.||.
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~ 123 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKT 123 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSE
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCe
Confidence 4799999999 99999999999999999998765311110 011135899999999999 7789999999999
Q ss_pred EEEEecCCCCceEEeccCCCcEEEEEecCC---CCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecCCC-EE
Q 039044 71 VKMWPLLSGGQPVTVAMHDAPIKEVAWIPE---MNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYP-LM 143 (194)
Q Consensus 71 i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~-~l 143 (194)
|++||+++++....+. +...+.++.|+|. +.++++++.|+.|++||+++++.+..+.. ...+++++|+++ .+
T Consensus 124 i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll 202 (408)
T 4a11_B 124 LKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYIL 202 (408)
T ss_dssp EEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEE
T ss_pred EEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEE
Confidence 9999999988877766 7788999999984 45999999999999999999888777654 346889999998 58
Q ss_pred EEEcCCCcEEEEECCCCCeeeEEee--------------CCCcceeeEEEEecCCCeeEEEEe
Q 039044 144 VVGTADRNLVVFNLQNPQTEFKRIN--------------SPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 144 ~~~~~dg~v~~~d~~~~~~~~~~~~--------------~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++++.||.|++||+++......... ..|...|.+++|+|++++|+++..
T Consensus 203 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 265 (408)
T 4a11_B 203 ATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGT 265 (408)
T ss_dssp EEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecC
Confidence 8999999999999987664333321 357788999999999999998863
No 82
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.1e-31 Score=195.30 Aligned_cols=187 Identities=19% Similarity=0.194 Sum_probs=146.2
Q ss_pred CCeeeEEEcC-CCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCC
Q 039044 1 DSVSSLCFSP-KANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 1 ~~v~~~~~~p-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 79 (194)
++|++++|+| ++++|++|+.||+|++||+..... ........+...+.+++|+|++++|++|+.||.|++||++.
T Consensus 165 ~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~- 240 (435)
T 4e54_B 165 GSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL---RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG- 240 (435)
T ss_dssp CCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEE---EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce---eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-
Confidence 4699999998 689999999999999999976532 11222233455688999999999999999999999999864
Q ss_pred CceEEeccCCCcEEEEEecCCCC-EEEEeeCCCeEEEEeCCCCCceeE------EecCCeEEEEecCCCEEEEEcCCCcE
Q 039044 80 GQPVTVAMHDAPIKEVAWIPEMN-LLATGSWDKTLKYWDTRQPNPVHT------QQLPDRCYALTVRYPLMVVGTADRNL 152 (194)
Q Consensus 80 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~vwd~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~dg~v 152 (194)
+.+..+..|...|++++|+|++. ++++++.|+.|++||+++.+.... +...+.+++|+|++++|++++.||.|
T Consensus 241 ~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i 320 (435)
T 4e54_B 241 KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEI 320 (435)
T ss_dssp CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCE
T ss_pred ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEE
Confidence 56677889999999999999876 788999999999999988664332 23345788999999999999999999
Q ss_pred EEEECCCCCeeeEEeeCCC----cceeeEEEEecCCCeeEEEE
Q 039044 153 VVFNLQNPQTEFKRINSPL----KYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 153 ~~~d~~~~~~~~~~~~~~~----~~~v~~i~~~p~~~~l~~~~ 191 (194)
++||+++...+........ ...+....|+|++..++++.
T Consensus 321 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (435)
T 4e54_B 321 RVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGR 363 (435)
T ss_dssp EEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEEC
T ss_pred EEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEE
Confidence 9999998765433322111 11234567888888777764
No 83
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.9e-30 Score=180.20 Aligned_cols=183 Identities=16% Similarity=0.261 Sum_probs=141.5
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCce
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQP 82 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 82 (194)
.++|+|++++ +|++|. |++|+|||+.+++. ........|...|.+++|+|++++|++|+.||.|++||+++++.+
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~---~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDI---LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 102 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCE---EEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCE---EEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE
Confidence 4679999876 777765 99999999988753 222334578889999999999999999999999999999876543
Q ss_pred EE-----------------------------------------eccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCC
Q 039044 83 VT-----------------------------------------VAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP 121 (194)
Q Consensus 83 ~~-----------------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~ 121 (194)
.. +..|...+..+.+.++++++++++.|+.|++||++++
T Consensus 103 ~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 103 RNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp EEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCB
T ss_pred EEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCC
Confidence 33 2346677888899999999999999999999999865
Q ss_pred Cce----eE----------E-------------------------------------ecCCeEEEEecCCCEEEEEc--C
Q 039044 122 NPV----HT----------Q-------------------------------------QLPDRCYALTVRYPLMVVGT--A 148 (194)
Q Consensus 122 ~~~----~~----------~-------------------------------------~~~~~~~~~~~~~~~l~~~~--~ 148 (194)
+.. .. . ......+.+++++..+++++ .
T Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~ 262 (318)
T 4ggc_A 183 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFA 262 (318)
T ss_dssp TTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTT
T ss_pred cccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcC
Confidence 321 00 0 00113566777787777654 7
Q ss_pred CCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 149 DRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 149 dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
|+.|++||+++++. ... ..+|...|++++|+|+|++|++|+.
T Consensus 263 d~~i~iwd~~~~~~-~~~-l~gH~~~V~~l~~spdg~~l~S~s~ 304 (318)
T 4ggc_A 263 QNQLVIWKYPTMAK-VAE-LKGHTSRVLSLTMSPDGATVASAAA 304 (318)
T ss_dssp TCCEEEEETTTCCE-EEE-ECCCSSCEEEEEECTTSSCEEEEET
T ss_pred CCEEEEEECCCCcE-EEE-EcCCCCCEEEEEEcCCCCEEEEEec
Confidence 99999999998764 333 3568999999999999999999874
No 84
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-30 Score=188.51 Aligned_cols=190 Identities=13% Similarity=0.203 Sum_probs=159.5
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccc-------------------------------------------
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVA------------------------------------------- 37 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~------------------------------------------- 37 (194)
+.|.+++|+|++++|++++.|+.|++||+.++.....
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 229 (425)
T 1r5m_A 150 APIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAI 229 (425)
T ss_dssp SCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCE
T ss_pred ccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeE
Confidence 3689999999999999999999999999975432100
Q ss_pred --------cccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeC
Q 039044 38 --------SVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSW 109 (194)
Q Consensus 38 --------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 109 (194)
........|..++.+++|+|++++|++++.|+.|++||+++++.+..+..|...|.+++|+|++ ++++++.
T Consensus 230 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~ 308 (425)
T 1r5m_A 230 FVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSM 308 (425)
T ss_dssp EEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEET
T ss_pred EEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeC
Confidence 0112334678899999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCeEEEEeCCCCCceeEEec---CCeEEEEecCCCEEEEEcCCCcEEEEECCCCCe-------------------eeEEe
Q 039044 110 DKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQT-------------------EFKRI 167 (194)
Q Consensus 110 d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~-------------------~~~~~ 167 (194)
|+.|++||+++++.+..+.. ...+++++|+++++++++.||.|++||+++.+. ....+
T Consensus 309 d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (425)
T 1r5m_A 309 DGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASY 388 (425)
T ss_dssp TSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEE
T ss_pred CCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhh
Confidence 99999999999888777654 456889999999999999999999999987550 22233
Q ss_pred eCCCcc--eeeEEEEecCCCeeEEEEe
Q 039044 168 NSPLKY--QTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 168 ~~~~~~--~v~~i~~~p~~~~l~~~~~ 192 (194)
..+.. .|.+++|+|++++|+++..
T Consensus 389 -~~~~~~~~v~~~~~s~~~~~l~~~~~ 414 (425)
T 1r5m_A 389 -QSSQDNDYIFDLSWNCAGNKISVAYS 414 (425)
T ss_dssp -CCTTCCCCEEEEEECTTSSEEEEEES
T ss_pred -cCcccCCceEEEEccCCCceEEEEec
Confidence 34544 8999999999999988763
No 85
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.2e-30 Score=210.06 Aligned_cols=156 Identities=24% Similarity=0.356 Sum_probs=142.0
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
+.|++++|+|+++++++|+.||+|++||+.++.. ...+.+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~-----~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~ 690 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEK-----LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK 690 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCE-----EEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc
Confidence 4689999999999999999999999999988743 45567899999999999999999999999999999999999
Q ss_pred ceEEeccCCCcEEEEEecC--CCCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecCCCEEEEEcCCCcEEEE
Q 039044 81 QPVTVAMHDAPIKEVAWIP--EMNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTADRNLVVF 155 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~dg~v~~~ 155 (194)
.+..+..|...|.+++|+| ++.++++++.|+.|++||+++++.+..+.. ...+++|+|+++++++++.||.|++|
T Consensus 691 ~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vw 770 (1249)
T 3sfz_A 691 LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLW 770 (1249)
T ss_dssp EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEE
T ss_pred eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEE
Confidence 9999999999999999999 556899999999999999999998877654 44688999999999999999999999
Q ss_pred ECCCCC
Q 039044 156 NLQNPQ 161 (194)
Q Consensus 156 d~~~~~ 161 (194)
|+++.+
T Consensus 771 d~~~~~ 776 (1249)
T 3sfz_A 771 DVRSAN 776 (1249)
T ss_dssp EGGGTE
T ss_pred eCCCCc
Confidence 998764
No 86
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.7e-31 Score=203.75 Aligned_cols=185 Identities=18% Similarity=0.229 Sum_probs=161.6
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCC-
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSG- 79 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~- 79 (194)
++|.+++|+|++++|++|+.||.|++|++.++.. ......|...|.+++|+|++++|++++.||.|++||++++
T Consensus 56 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~ 130 (814)
T 3mkq_A 56 TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK-----VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW 130 (814)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE-----EEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS
T ss_pred CcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE-----EEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc
Confidence 3689999999999999999999999999988743 4556779999999999999999999999999999999887
Q ss_pred CceEEeccCCCcEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCCceeEEe----cCCeEEEEec--CCCEEEEEcCCCcE
Q 039044 80 GQPVTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVHTQQ----LPDRCYALTV--RYPLMVVGTADRNL 152 (194)
Q Consensus 80 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~vwd~~~~~~~~~~~----~~~~~~~~~~--~~~~l~~~~~dg~v 152 (194)
.....+..|...|.+++|+| +++.+++++.||.|++||+++++...... .....++++| +++++++++.||.|
T Consensus 131 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i 210 (814)
T 3mkq_A 131 ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTI 210 (814)
T ss_dssp EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEE
T ss_pred eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEE
Confidence 55667788999999999999 88999999999999999999887766654 3457889999 89999999999999
Q ss_pred EEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 153 VVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 153 ~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++||+++.+. .... ..|...+.+++|+|+++.++++..
T Consensus 211 ~~~d~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~l~~~~~ 248 (814)
T 3mkq_A 211 KIWDYQTKSC-VATL-EGHMSNVSFAVFHPTLPIIISGSE 248 (814)
T ss_dssp EEEETTTTEE-EEEE-ECCSSCEEEEEECSSSSEEEEEET
T ss_pred EEEECCCCcE-EEEE-cCCCCCEEEEEEcCCCCEEEEEeC
Confidence 9999988764 2333 457788999999999999998863
No 87
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=8.6e-31 Score=188.81 Aligned_cols=185 Identities=17% Similarity=0.235 Sum_probs=152.9
Q ss_pred eeEEEcCCCCE-EEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEec-CCCeEEEecCCCeEEEEecCCC--
Q 039044 4 SSLCFSPKANI-LVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD-DGTTVFSGGCDKQVKMWPLLSG-- 79 (194)
Q Consensus 4 ~~~~~~p~~~~-l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~-- 79 (194)
..++++|+... +++++.||.|++|++...... ......+.+|...|.+++|+| ++++|++|+.||.|++||+.++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~-~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRV-DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEEC-CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCC-CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 45778887644 445788999999999664321 112344668999999999999 9999999999999999999987
Q ss_pred -----CceEEeccCCCcEEEEEecCCC-CEEEEeeCCCeEEEEeCCCCCceeEE--ec---CCeEEEEecCCCEEEEEcC
Q 039044 80 -----GQPVTVAMHDAPIKEVAWIPEM-NLLATGSWDKTLKYWDTRQPNPVHTQ--QL---PDRCYALTVRYPLMVVGTA 148 (194)
Q Consensus 80 -----~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~vwd~~~~~~~~~~--~~---~~~~~~~~~~~~~l~~~~~ 148 (194)
+.+..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+ .. ...+++|+|++++|++++.
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec
Confidence 5677888999999999999998 69999999999999999999888777 32 3478999999999999999
Q ss_pred CCcEEEEECCCCCeeeEEeeCCCcce-eeEEEEecCCCeeEEE
Q 039044 149 DRNLVVFNLQNPQTEFKRINSPLKYQ-TRCVAAFPDQQGFLVC 190 (194)
Q Consensus 149 dg~v~~~d~~~~~~~~~~~~~~~~~~-v~~i~~~p~~~~l~~~ 190 (194)
||.|++||+++++.. ......|... +.++.|+|+++++++|
T Consensus 197 d~~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVV-AEKDRPHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp TSEEEEEETTTTEEE-EEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred CCcEEEEeCCCCcee-eeeccCCCCCcceEEEEcCCCcEEEEe
Confidence 999999999987643 3332345544 8999999999999987
No 88
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-30 Score=187.66 Aligned_cols=187 Identities=15% Similarity=0.249 Sum_probs=151.5
Q ss_pred CCeeeEEEcCCCC-EEEEeeCCCeEEEEec----ccCCc-----cccccccccc------CCCCCeeEEEEecCCCeEEE
Q 039044 1 DSVSSLCFSPKAN-ILVATSWDNQVRCWEI----SRGGT-----GVASVPKASI------SHDHPVLCSTWKDDGTTVFS 64 (194)
Q Consensus 1 ~~v~~~~~~p~~~-~l~~~~~d~~i~i~~~----~~~~~-----~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~ 64 (194)
++|++++|+|+++ +|++|+.|+.|++|++ .++.. .......... .|...|.+++|+|++++|++
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 125 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVT 125 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEE
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEE
Confidence 4689999999999 9999999999999999 65541 0111111111 26779999999999999999
Q ss_pred ecCCCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecC--------------
Q 039044 65 GGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP-------------- 130 (194)
Q Consensus 65 ~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~-------------- 130 (194)
++.||.|++|| .+++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+..+
T Consensus 126 ~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (425)
T 1r5m_A 126 GVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSG 204 (425)
T ss_dssp EETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------------
T ss_pred EeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccC
Confidence 99999999999 667788888999999999999999999999999999999999988877665432
Q ss_pred ----CeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 131 ----DRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 131 ----~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
..++++++++ .+++++.+|.|++||+++.+.. .. ...|...+.+++|+|++++|+++.
T Consensus 205 ~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~-~~-~~~~~~~i~~~~~~~~~~~l~~~~ 266 (425)
T 1r5m_A 205 DGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPT-GK-LIGHHGPISVLEFNDTNKLLLSAS 266 (425)
T ss_dssp -CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCS-EE-ECCCSSCEEEEEEETTTTEEEEEE
T ss_pred CcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCcee-ee-eccCCCceEEEEECCCCCEEEEEc
Confidence 4567888874 6889999999999999987543 22 345788999999999999999886
No 89
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=7.6e-31 Score=181.76 Aligned_cols=185 Identities=14% Similarity=0.108 Sum_probs=136.6
Q ss_pred CeeeEEEcCC----CCEEEEeeC--------------------CCeEEEEecccCCcccccccccccCCCCCeeEEEEec
Q 039044 2 SVSSLCFSPK----ANILVATSW--------------------DNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD 57 (194)
Q Consensus 2 ~v~~~~~~p~----~~~l~~~~~--------------------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 57 (194)
.|++++++|+ ++.+++++. |+.|++|++.... ........|...+..++|+|
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG----~~~~s~~~~~~~v~~l~fs~ 188 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDG----GGKENQFLMPPEETILTFAE 188 (356)
T ss_dssp EEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTS----CEEEEEEECCCSSCEEEEEE
T ss_pred ceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCC----ceeeeeccCCCceeeEEeec
Confidence 5788889998 777777553 7788888885433 12344557888888999998
Q ss_pred ---CCCeEEEecCCCeEEEEecCCCCceEEeccCC---CcEEEEEecCCCCEE------------EEeeCCCeEEEEeCC
Q 039044 58 ---DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHD---APIKEVAWIPEMNLL------------ATGSWDKTLKYWDTR 119 (194)
Q Consensus 58 ---~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l------------~~~~~d~~v~vwd~~ 119 (194)
++.+|++++.|++|++||+++++.+.++.+|. ..+.+++|+|+|.++ ++++.|++|++||..
T Consensus 189 ~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 189 VQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp EETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred cCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 77999999999999999999999999987654 367788999999876 567889999999999
Q ss_pred CCCceeEEe-----cC-CeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCccee-eEEEEecCCCeeEEEEe
Q 039044 120 QPNPVHTQQ-----LP-DRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQT-RCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 120 ~~~~~~~~~-----~~-~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v-~~i~~~p~~~~l~~~~~ 192 (194)
+++.+..+. .+ ...+..+.++..+++++.|++|+|||+.+++.. ..+ .+|...+ .+++|+|||++|++|+.
T Consensus 269 tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l-~tL-~gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 269 TTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCT-ALL-PPVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp TTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEE-EEE-CCC--CCCCEEEECSSSSEEEEECT
T ss_pred CCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEE-EEe-cCCCCCeEEEEEECCCCCEEEEEEC
Confidence 988765542 11 123444555788999999999999999998743 333 3455544 46899999999999864
No 90
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=8e-30 Score=184.81 Aligned_cols=189 Identities=21% Similarity=0.355 Sum_probs=153.8
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCccc------------------------------------ccccccccC
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGV------------------------------------ASVPKASIS 45 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~------------------------------------~~~~~~~~~ 45 (194)
.|++++|+|++++|++|+.||+|++||+.++.... ......+.+
T Consensus 149 ~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~ 228 (420)
T 4gga_A 149 YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSG 228 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEEC
T ss_pred cEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecc
Confidence 59999999999999999999999999997643100 001122356
Q ss_pred CCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc----eEEeccCCCcEEEEEecCCC-CEEEE--eeCCCeEEEEeC
Q 039044 46 HDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ----PVTVAMHDAPIKEVAWIPEM-NLLAT--GSWDKTLKYWDT 118 (194)
Q Consensus 46 ~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~----~~~~~~~~~~v~~~~~~~~~-~~l~~--~~~d~~v~vwd~ 118 (194)
|...+..+.|+|+++++++++.|+.+++|+...++. +.....|...|.+++|+|.+ ..+++ ++.|+.|++||+
T Consensus 229 h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~ 308 (420)
T 4gga_A 229 HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 308 (420)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEET
T ss_pred cccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeC
Confidence 788899999999999999999999999999987653 45667899999999999965 45554 457999999999
Q ss_pred CCCCceeEEecCC--eEEEEecCCCEEEEEc--CCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 119 RQPNPVHTQQLPD--RCYALTVRYPLMVVGT--ADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 119 ~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~--~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++++....+..+. ..+.++++++.+++++ .|+.|++||+++++. ... ..+|...|.+++|+|+|++|++|+.
T Consensus 309 ~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~-v~~-l~gH~~~V~~l~~spdg~~l~S~s~ 384 (420)
T 4gga_A 309 CSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK-VAE-LKGHTSRVLSLTMSPDGATVASAAA 384 (420)
T ss_dssp TTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE-EEE-ECCCSSCEEEEEECTTSSCEEEEET
T ss_pred CccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcE-EEE-EcCCCCCEEEEEEcCCCCEEEEEec
Confidence 9999887776543 5778899999888765 689999999998764 333 3568999999999999999999874
No 91
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.98 E-value=1.1e-30 Score=184.95 Aligned_cols=187 Identities=13% Similarity=0.162 Sum_probs=153.1
Q ss_pred CCeeeEEEcCC---CCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEE------ecCCCeEEEecCCCeE
Q 039044 1 DSVSSLCFSPK---ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTW------KDDGTTVFSGGCDKQV 71 (194)
Q Consensus 1 ~~v~~~~~~p~---~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------~~~~~~l~~~~~d~~i 71 (194)
++|.+++|+|+ +++|++|+.||.|++||+..... ....+..|...|.+++| +|++++|++++.|+.|
T Consensus 66 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i 141 (357)
T 3i2n_A 66 KPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEM----PVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV 141 (357)
T ss_dssp SCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSS----CSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred CcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCc----cEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence 36899999998 69999999999999999987751 34566789999999965 6789999999999999
Q ss_pred EEEecCCCC-ceEEeccCCC----cEEEEE----ecCCCCEEEEeeCCCeEEEEeCCCCCceeEEe--cCCeEEEEec--
Q 039044 72 KMWPLLSGG-QPVTVAMHDA----PIKEVA----WIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ--LPDRCYALTV-- 138 (194)
Q Consensus 72 ~~~d~~~~~-~~~~~~~~~~----~v~~~~----~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~--~~~~~~~~~~-- 138 (194)
++||+++++ .+..+..|.. .+.+++ |+|+++++++++.|+.|++||+++++...... ....+++++|
T Consensus 142 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~ 221 (357)
T 3i2n_A 142 KVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKD 221 (357)
T ss_dssp EEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSS
T ss_pred EEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCC
Confidence 999999887 6777765554 788998 78899999999999999999999888654443 3557889999
Q ss_pred -CCCEEEEEcCCCcEEEEECCCCCeeeEE---eeCCCcceeeEEEEecCCC-eeEEEE
Q 039044 139 -RYPLMVVGTADRNLVVFNLQNPQTEFKR---INSPLKYQTRCVAAFPDQQ-GFLVCI 191 (194)
Q Consensus 139 -~~~~l~~~~~dg~v~~~d~~~~~~~~~~---~~~~~~~~v~~i~~~p~~~-~l~~~~ 191 (194)
++.++++++.||.|++||+++.+..... ....|...|.+++|+|+++ +++++.
T Consensus 222 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 279 (357)
T 3i2n_A 222 ISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAG 279 (357)
T ss_dssp SSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred CCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEe
Confidence 8999999999999999999875422111 1235788999999999998 677765
No 92
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.98 E-value=3.4e-30 Score=181.40 Aligned_cols=192 Identities=13% Similarity=0.147 Sum_probs=155.2
Q ss_pred CCeeeEEEcC--CCCEEEEeeCCCeEEEEecccCCccc----ccccccccCCCCCeeEEEEecC--CCeEEEecCCCeEE
Q 039044 1 DSVSSLCFSP--KANILVATSWDNQVRCWEISRGGTGV----ASVPKASISHDHPVLCSTWKDD--GTTVFSGGCDKQVK 72 (194)
Q Consensus 1 ~~v~~~~~~p--~~~~l~~~~~d~~i~i~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~ 72 (194)
++|++++|+| ++++|++|+.||.|++||+....... .........|...|.+++|+|+ +++|++++.|+.|+
T Consensus 58 ~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~ 137 (351)
T 3f3f_A 58 SSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILR 137 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEE
T ss_pred CcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEE
Confidence 3689999999 69999999999999999998764211 0123455679999999999999 99999999999999
Q ss_pred EEecCCCCceEEec-------------cCCCcEEEEEecCC---CCEEEEeeCCCeEEEEeCCCCCc--eeEEe---cCC
Q 039044 73 MWPLLSGGQPVTVA-------------MHDAPIKEVAWIPE---MNLLATGSWDKTLKYWDTRQPNP--VHTQQ---LPD 131 (194)
Q Consensus 73 ~~d~~~~~~~~~~~-------------~~~~~v~~~~~~~~---~~~l~~~~~d~~v~vwd~~~~~~--~~~~~---~~~ 131 (194)
+||+++++.+..+. .|...+.+++|+|+ +.++++++.++.+.+|+...++. +..+. ...
T Consensus 138 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i 217 (351)
T 3f3f_A 138 LYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLI 217 (351)
T ss_dssp EEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCE
T ss_pred EecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcce
Confidence 99999877654332 57789999999997 89999999999998888877765 33332 345
Q ss_pred eEEEEecCC----CEEEEEcCCCcEEEEECCCCCe--------------------------------------------e
Q 039044 132 RCYALTVRY----PLMVVGTADRNLVVFNLQNPQT--------------------------------------------E 163 (194)
Q Consensus 132 ~~~~~~~~~----~~l~~~~~dg~v~~~d~~~~~~--------------------------------------------~ 163 (194)
.+++|+|++ +++++++.||.|++||++.... .
T Consensus 218 ~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (351)
T 3f3f_A 218 RSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVE 297 (351)
T ss_dssp EEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEE
T ss_pred eEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeeccccccc
Confidence 789999998 8999999999999999986421 1
Q ss_pred eEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 164 FKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 164 ~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
.......|...|.+++|+|++++|++++.
T Consensus 298 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 326 (351)
T 3f3f_A 298 LLSEHDDHNGEVWSVSWNLTGTILSSAGD 326 (351)
T ss_dssp EEEEECTTSSCEEEEEECSSSCCEEEEET
T ss_pred EEEEEecccccEEEEEEcCCCCEEEEecC
Confidence 22233467889999999999999999863
No 93
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3e-29 Score=178.07 Aligned_cols=189 Identities=15% Similarity=0.228 Sum_probs=160.2
Q ss_pred CeeeEEEcCCCCEEEEeeCC-----CeEEEEecccCCcccc------cccccccCCCC--CeeEEEEecCCCeEEEecCC
Q 039044 2 SVSSLCFSPKANILVATSWD-----NQVRCWEISRGGTGVA------SVPKASISHDH--PVLCSTWKDDGTTVFSGGCD 68 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d-----~~i~i~~~~~~~~~~~------~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~d 68 (194)
.|.+++|+|+++.+++++.+ +.|++|++........ ........+.. .+.+++|+|++++|++++.|
T Consensus 117 ~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 196 (369)
T 3zwl_B 117 PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD 196 (369)
T ss_dssp CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT
T ss_pred CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC
Confidence 68899999999999999999 9999999987643110 11223334554 89999999999999999999
Q ss_pred CeEEEEecCC-CCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec--CCeEEEEecCCCEEEE
Q 039044 69 KQVKMWPLLS-GGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL--PDRCYALTVRYPLMVV 145 (194)
Q Consensus 69 ~~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~l~~ 145 (194)
|.|++||+++ ++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+.. ....++++|+++++++
T Consensus 197 g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 276 (369)
T 3zwl_B 197 GKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIIL 276 (369)
T ss_dssp SEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEE
T ss_pred CEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEE
Confidence 9999999998 677778888999999999999999999999999999999999988877664 3468899999999999
Q ss_pred EcCCC--------------cEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 146 GTADR--------------NLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 146 ~~~dg--------------~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++.++ .+++||+.+.+.. ..+ ..|...|.+++|+|++++|+++..
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~~~-~~~~~~v~~~~~s~~~~~l~s~~~ 335 (369)
T 3zwl_B 277 GGGQEAKDVTTTSANEGKFEARFYHKIFEEEI-GRV-QGHFGPLNTVAISPQGTSYASGGE 335 (369)
T ss_dssp EECCC-------------CEEEEEETTTCCEE-EEE-ECCSSCEEEEEECTTSSEEEEEET
T ss_pred eecCCCceEEEEecCCCcceeEEEecCCCcch-hhe-ecccCcEEEEEECCCCCEEEEEcC
Confidence 99988 8999999987643 333 457889999999999999999863
No 94
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.7e-31 Score=197.65 Aligned_cols=152 Identities=15% Similarity=0.152 Sum_probs=130.0
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEE--EEecCC-CeEEEecCCCeEEEEecCC
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCS--TWKDDG-TTVFSGGCDKQVKMWPLLS 78 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~d~~i~~~d~~~ 78 (194)
.|++++|+|+ ..|++|+.||+|++||+.++.. ....+..|...|.++ .|+|++ ++|++|+.|++|++||+++
T Consensus 268 ~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~----~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~ 342 (524)
T 2j04_B 268 LITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEV----PSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD 342 (524)
T ss_dssp CEEEEEESSS-SEEEEEETTSEEEEEETTBCSS----CSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG
T ss_pred CEEEEEecCC-CeEEEEeCCCEEEEEECCCCCC----ceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC
Confidence 6899999986 4899999999999999987632 233467899999999 568887 8999999999999999998
Q ss_pred CCceEEeccCCC--cEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEe---cCCeEEEEecCCCEEEEEcCCCcEE
Q 039044 79 GGQPVTVAMHDA--PIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ---LPDRCYALTVRYPLMVVGTADRNLV 153 (194)
Q Consensus 79 ~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~dg~v~ 153 (194)
++.+..+.+|.. .|.+++|+|+++.+++++.|++|++||++++..+..+. ..+.+++|+|+++.|++|+.||+|+
T Consensus 343 ~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~ 422 (524)
T 2j04_B 343 IATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLI 422 (524)
T ss_dssp HHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEE
T ss_pred CCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEE
Confidence 887777766653 58899999999999999999999999999988765544 3457899999999999999999999
Q ss_pred EEECC
Q 039044 154 VFNLQ 158 (194)
Q Consensus 154 ~~d~~ 158 (194)
+||+.
T Consensus 423 lwd~~ 427 (524)
T 2j04_B 423 ITNAA 427 (524)
T ss_dssp CCBSC
T ss_pred EEech
Confidence 99864
No 95
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.4e-30 Score=184.10 Aligned_cols=187 Identities=11% Similarity=0.050 Sum_probs=142.3
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCc----cccc-ccccccCCCCCeeEEEEec--CCCeEEEecCCCeEEEE
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGT----GVAS-VPKASISHDHPVLCSTWKD--DGTTVFSGGCDKQVKMW 74 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~----~~~~-~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~~~ 74 (194)
.|.++.|+|+ +++++.|++|++|+...... .... .......|..+|.+++|+| +++++++++.||.|++|
T Consensus 78 ~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~w 154 (343)
T 3lrv_A 78 NPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQ 154 (343)
T ss_dssp CCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEE
T ss_pred CceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEE
Confidence 4667788887 99999999999998763210 0001 1222335678999999999 99999999999999999
Q ss_pred ecCCCCceEEec-cCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce-eEEec----CCeEEEEecCCCEEEEEcC
Q 039044 75 PLLSGGQPVTVA-MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV-HTQQL----PDRCYALTVRYPLMVVGTA 148 (194)
Q Consensus 75 d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~-~~~~~----~~~~~~~~~~~~~l~~~~~ 148 (194)
|+++++...... .|...+.+++|+|++.+|++|+.|+.|++||+++++.+ ..+.. +..+++|+|++.+|++++
T Consensus 155 d~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~- 233 (343)
T 3lrv_A 155 SYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC- 233 (343)
T ss_dssp ESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-
T ss_pred ECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-
Confidence 999988866553 45568999999999999999999999999999998876 55544 457899999999999999
Q ss_pred CCcEEEEECCCCCeeeEEee-CCCccee--eEEEEecCCCeeEEEEe
Q 039044 149 DRNLVVFNLQNPQTEFKRIN-SPLKYQT--RCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 149 dg~v~~~d~~~~~~~~~~~~-~~~~~~v--~~i~~~p~~~~l~~~~~ 192 (194)
++.|++||+++.+....... ..+...+ .+++|+|+|++|++++.
T Consensus 234 ~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 234 DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 55999999998764211110 0122333 36999999999999764
No 96
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.1e-29 Score=185.49 Aligned_cols=181 Identities=10% Similarity=0.076 Sum_probs=149.8
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecC---CCeEEEecCCCeEEEEecCC
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDD---GTTVFSGGCDKQVKMWPLLS 78 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~d~~i~~~d~~~ 78 (194)
.|++++|+|++++|++|+.||.+++|++....... .....+.+|...|.+++|+|+ +++|++|+.|+.|++||+++
T Consensus 151 ~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~ 229 (450)
T 2vdu_B 151 RPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEK-FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ 229 (450)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSS-CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC
T ss_pred CceEEEEcCCCCEEEEEeCCCcEEEEecCCccccc-ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC
Confidence 58899999999999999999999999998764310 022355678999999999999 99999999999999999999
Q ss_pred CCceEE-eccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec----------------------------
Q 039044 79 GGQPVT-VAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL---------------------------- 129 (194)
Q Consensus 79 ~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---------------------------- 129 (194)
++.+.. +.+|...|.+++|+ ++++|++++.|+.|++||+++++.+..+..
T Consensus 230 ~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (450)
T 2vdu_B 230 CFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEF 308 (450)
T ss_dssp TTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCC
T ss_pred CceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceE
Confidence 988877 55899999999999 999999999999999999999987766642
Q ss_pred CCeEEEEecCCCEEEEEc-CCCcEEEEEC--CCCC--eeeEEeeCCCcceeeEEEEecCCCe
Q 039044 130 PDRCYALTVRYPLMVVGT-ADRNLVVFNL--QNPQ--TEFKRINSPLKYQTRCVAAFPDQQG 186 (194)
Q Consensus 130 ~~~~~~~~~~~~~l~~~~-~dg~v~~~d~--~~~~--~~~~~~~~~~~~~v~~i~~~p~~~~ 186 (194)
....++++|+++++++++ .++.|++|++ .... .....+. .+ ..+.+++|+|++.+
T Consensus 309 ~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~-~~-~~v~~~~~~~~~~~ 368 (450)
T 2vdu_B 309 AVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIIT-FP-YNVISLSAHNDEFQ 368 (450)
T ss_dssp CEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEE-CS-SCEEEEEEETTEEE
T ss_pred EEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEec-cC-CceEEEEecCCcEE
Confidence 235788999999999998 8999999999 4331 2223333 23 78999999995433
No 97
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.98 E-value=1.7e-29 Score=181.64 Aligned_cols=186 Identities=19% Similarity=0.260 Sum_probs=154.2
Q ss_pred CCeeeEEEcC-CCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecC---CCeEEEecCCCeEEEEec
Q 039044 1 DSVSSLCFSP-KANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDD---GTTVFSGGCDKQVKMWPL 76 (194)
Q Consensus 1 ~~v~~~~~~p-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~d~~i~~~d~ 76 (194)
++|.+++|+| ++++|++++.|+.|++||+..... .....+...+.++.|.|. +.++++++.++.|++||+
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 173 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT------ADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL 173 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE------EEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc------ceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence 3689999999 778999999999999999987642 223347788999999984 459999999999999999
Q ss_pred CCCCceEEeccCCCcEEEEEecCCCC-EEEEeeCCCeEEEEeCCCCC-ceeE------------------EecCCeEEEE
Q 039044 77 LSGGQPVTVAMHDAPIKEVAWIPEMN-LLATGSWDKTLKYWDTRQPN-PVHT------------------QQLPDRCYAL 136 (194)
Q Consensus 77 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~vwd~~~~~-~~~~------------------~~~~~~~~~~ 136 (194)
++++.+..+..|...|.+++|+|+++ ++++++.||.|++||+++.. .+.. +.....++++
T Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 174 KSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp SSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred CCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 99999999999999999999999988 58899999999999998765 2222 2234568899
Q ss_pred ecCCCEEEEEcCCCcEEEEECCCCCee---------------------------------------------eEEeeCCC
Q 039044 137 TVRYPLMVVGTADRNLVVFNLQNPQTE---------------------------------------------FKRINSPL 171 (194)
Q Consensus 137 ~~~~~~l~~~~~dg~v~~~d~~~~~~~---------------------------------------------~~~~~~~~ 171 (194)
+|+++++++++.||.|++||+++.+.. .......|
T Consensus 254 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~ 333 (408)
T 4a11_B 254 TSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGH 333 (408)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCC
T ss_pred cCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccC
Confidence 999999999999999999999875421 11122457
Q ss_pred cceeeEEEEecCCCeeEEEEe
Q 039044 172 KYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 172 ~~~v~~i~~~p~~~~l~~~~~ 192 (194)
...|.+++|+|++++|+++..
T Consensus 334 ~~~v~~~~~s~~~~~l~s~~~ 354 (408)
T 4a11_B 334 YKTVDCCVFQSNFQELYSGSR 354 (408)
T ss_dssp SSCEEEEEEETTTTEEEEEET
T ss_pred CCeEEEEEEcCCCCEEEEECC
Confidence 789999999999999998863
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.8e-30 Score=188.89 Aligned_cols=184 Identities=12% Similarity=0.116 Sum_probs=148.2
Q ss_pred eeeEE--EcCCCCEEEEeeCCCeEEEEecccCCcccccccccccC--CCCCeeEEEEecCCCeEEEecCCCeEEEEecCC
Q 039044 3 VSSLC--FSPKANILVATSWDNQVRCWEISRGGTGVASVPKASIS--HDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLS 78 (194)
Q Consensus 3 v~~~~--~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 78 (194)
+.++. ++|++.+|++|+.|+.|++||+..... ...+.. |...|.+++|+|++++|++|+.||.|++||+++
T Consensus 171 ~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~-----~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 245 (437)
T 3gre_A 171 AVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER-----LQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF 245 (437)
T ss_dssp EEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE-----EEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred ceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee-----eEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC
Confidence 45555 567899999999999999999988643 334444 788999999999999999999999999999999
Q ss_pred CCceEEec-cCCCcEEEEEec----CCCCEEEEeeCCCeEEEEeCCCCCceeEEec------------------------
Q 039044 79 GGQPVTVA-MHDAPIKEVAWI----PEMNLLATGSWDKTLKYWDTRQPNPVHTQQL------------------------ 129 (194)
Q Consensus 79 ~~~~~~~~-~~~~~v~~~~~~----~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~------------------------ 129 (194)
++.+..+. .|...|.+++|+ |++.+|++++.|+.|++||+++++.+..+..
T Consensus 246 ~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (437)
T 3gre_A 246 NVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCG 325 (437)
T ss_dssp TEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCC
T ss_pred ccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecc
Confidence 88888775 788899999655 4678999999999999999998876655542
Q ss_pred -----CCeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEee-----------------------------------C
Q 039044 130 -----PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRIN-----------------------------------S 169 (194)
Q Consensus 130 -----~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~-----------------------------------~ 169 (194)
...+++++ ++++|++|+.||.|++||+++++....... .
T Consensus 326 ~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (437)
T 3gre_A 326 IRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSL 404 (437)
T ss_dssp CCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-----------
T ss_pred cccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCccc
Confidence 13567888 778999999999999999998764322111 1
Q ss_pred CCcceeeEEEEecC--CCeeEEEEe
Q 039044 170 PLKYQTRCVAAFPD--QQGFLVCIH 192 (194)
Q Consensus 170 ~~~~~v~~i~~~p~--~~~l~~~~~ 192 (194)
.|...|++++|+++ +.+|++|..
T Consensus 405 ~h~~~I~~i~~~~~~~~~~l~s~~~ 429 (437)
T 3gre_A 405 YHHDIINSISTCEVDETPLLVACDN 429 (437)
T ss_dssp --CCCEEEEEEEESSSSEEEEEEET
T ss_pred ccccceeeEeeeccCCceEEEEEcC
Confidence 27788999999998 777877753
No 99
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.9e-30 Score=199.97 Aligned_cols=189 Identities=18% Similarity=0.251 Sum_probs=157.3
Q ss_pred CCeeeEEEcCC--CCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecC--CCeEEEecCCCeEEEEec
Q 039044 1 DSVSSLCFSPK--ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDD--GTTVFSGGCDKQVKMWPL 76 (194)
Q Consensus 1 ~~v~~~~~~p~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~~~d~ 76 (194)
++|++++|+|+ +++|++|+.||.|++||+.++.. ........|..+|.+++|+|+ ++.+++|+.||.|++||+
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~---~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl 130 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW---SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEF 130 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE---EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc---cccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEe
Confidence 46899999988 99999999999999999987642 234556679999999999999 999999999999999999
Q ss_pred CCCC--ceEEeccCCCcEEEEEecC-------------CCCEEEEeeCCCeEEEEeCCCCCc----eeEEe---cCCeEE
Q 039044 77 LSGG--QPVTVAMHDAPIKEVAWIP-------------EMNLLATGSWDKTLKYWDTRQPNP----VHTQQ---LPDRCY 134 (194)
Q Consensus 77 ~~~~--~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~d~~v~vwd~~~~~~----~~~~~---~~~~~~ 134 (194)
+++. ....+..|...|.+++|+| ++.++++++.||.|++||++++.. ...+. ....++
T Consensus 131 ~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l 210 (753)
T 3jro_A 131 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 210 (753)
T ss_dssp CSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred ecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEE
Confidence 8873 3446678999999999999 589999999999999999988743 23332 345789
Q ss_pred EEecC---CCEEEEEcCCCcEEEEECCCCCeeeE---EeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 135 ALTVR---YPLMVVGTADRNLVVFNLQNPQTEFK---RINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 135 ~~~~~---~~~l~~~~~dg~v~~~d~~~~~~~~~---~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+|+|+ ++++++++.||.|++||+++.+.... .....+...+.+++|+|+|+++++|..
T Consensus 211 ~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~ 274 (753)
T 3jro_A 211 AWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG 274 (753)
T ss_dssp EECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECS
T ss_pred EeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcC
Confidence 99999 89999999999999999998642211 122347788999999999999998753
No 100
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=1.9e-29 Score=184.67 Aligned_cols=180 Identities=17% Similarity=0.274 Sum_probs=151.5
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCce
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQP 82 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 82 (194)
+.++.+ ++++|++|+.||+|++||+.++. ....+.+|...|.+++|+|++ .+++|+.||.|++||+++++.+
T Consensus 125 ~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~-----~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~ 196 (464)
T 3v7d_B 125 ITCLQF--EDNYVITGADDKMIRVYDSINKK-----FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCT 196 (464)
T ss_dssp EEEEEE--ETTEEEEEETTSCEEEEETTTTE-----EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEE--CCCEEEEEcCCCcEEEEECCCCc-----EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEE
Confidence 455555 56799999999999999998774 355667899999999999987 9999999999999999999999
Q ss_pred EEeccCCCcEEEEEec--CCCCEEEEeeCCCeEEEEeCCCCCcee-----------------------EEec-CCeEEEE
Q 039044 83 VTVAMHDAPIKEVAWI--PEMNLLATGSWDKTLKYWDTRQPNPVH-----------------------TQQL-PDRCYAL 136 (194)
Q Consensus 83 ~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~v~vwd~~~~~~~~-----------------------~~~~-~~~~~~~ 136 (194)
..+.+|...|.+++|+ ++++++++++.|+.|++||+++.+... .... .....++
T Consensus 197 ~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 276 (464)
T 3v7d_B 197 HVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV 276 (464)
T ss_dssp EEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE
T ss_pred EEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE
Confidence 9999999999999998 577899999999999999998766432 2222 2345677
Q ss_pred ecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 137 TVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 137 ~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+++++++++++.||.|++||+++.+.. . ....|...+.+++|+|+++.+++|+.
T Consensus 277 ~~~~~~l~~~~~d~~i~vwd~~~~~~~-~-~~~~~~~~v~~~~~~~~~~~l~sg~~ 330 (464)
T 3v7d_B 277 SGHGNIVVSGSYDNTLIVWDVAQMKCL-Y-ILSGHTDRIYSTIYDHERKRCISASM 330 (464)
T ss_dssp EEETTEEEEEETTSCEEEEETTTTEEE-E-EECCCSSCEEEEEEETTTTEEEEEET
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEE-E-EecCCCCCEEEEEEcCCCCEEEEEeC
Confidence 899999999999999999999987642 2 33457889999999999999999864
No 101
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=3.9e-29 Score=175.95 Aligned_cols=186 Identities=19% Similarity=0.223 Sum_probs=154.0
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCC--CeEEEecCCCeEEEEecCCC
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDG--TTVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~~~d~~~~ 79 (194)
.+..+.++|+++.|++|+.|+.+++||..... ........|...+..++|++++ .++++++.|+.|++||++++
T Consensus 130 ~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~ 205 (340)
T 4aow_A 130 DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC----KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC 205 (340)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTTSCE----EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT
T ss_pred ceeEEEEeecCccceeecCCCeEEEEEeCCCc----eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCC
Confidence 45678899999999999999999999987653 2234456788999999998864 56889999999999999999
Q ss_pred CceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecC--CeEEEEecCCCEEEEEcCCCcEEEEEC
Q 039044 80 GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP--DRCYALTVRYPLMVVGTADRNLVVFNL 157 (194)
Q Consensus 80 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~dg~v~~~d~ 157 (194)
+.+..+.+|...|++++|+|++++|++++.|+.|++||+++.+++..+... ...++++|++.+ ++++.|+.|++||+
T Consensus 206 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~d~~i~iwd~ 284 (340)
T 4aow_A 206 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYW-LCAATGPSIKIWDL 284 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSE-EEEEETTEEEEEET
T ss_pred ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCce-eeccCCCEEEEEEC
Confidence 999999999999999999999999999999999999999999888777654 357788887754 55667999999999
Q ss_pred CCCCeeeEE-------eeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 158 QNPQTEFKR-------INSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 158 ~~~~~~~~~-------~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++....... ....|...|++++|+|+|++|++|+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 326 (340)
T 4aow_A 285 EGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYT 326 (340)
T ss_dssp TTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEET
T ss_pred CCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeC
Confidence 876432111 12357788999999999999999864
No 102
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=1.7e-29 Score=203.46 Aligned_cols=185 Identities=21% Similarity=0.291 Sum_probs=159.8
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEec--CCCeEEEecCCCeEEEEecCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD--DGTTVFSGGCDKQVKMWPLLS 78 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~~~d~~~ 78 (194)
+.|.+++|+|++++|++++.|++|++||+.++.. .....+|...+.+++|+| ++.++++|+.|+.|++||+++
T Consensus 658 ~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~ 732 (1249)
T 3sfz_A 658 DEVLCCAFSSDDSYIATCSADKKVKIWDSATGKL-----VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ 732 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-----EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS
T ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEECCCCce-----EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC
Confidence 4689999999999999999999999999988743 556678999999999999 556899999999999999999
Q ss_pred CCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEE-------------------------------
Q 039044 79 GGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ------------------------------- 127 (194)
Q Consensus 79 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~------------------------------- 127 (194)
++.+..+.+|...|++++|+|+++++++++.||.|++||+++++.....
T Consensus 733 ~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~ 812 (1249)
T 3sfz_A 733 KECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK 812 (1249)
T ss_dssp SSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSE
T ss_pred cchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCE
Confidence 9999999999999999999999999999999999999998765432221
Q ss_pred ---------------------------ecCCeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEE
Q 039044 128 ---------------------------QLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAA 180 (194)
Q Consensus 128 ---------------------------~~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~ 180 (194)
.....+++++|+++.+++++.+|.|++||+.+.... .....|...|.+++|
T Consensus 813 l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~--~~~~~h~~~v~~v~~ 890 (1249)
T 3sfz_A 813 IIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKV--ADCRGHLSWVHGVMF 890 (1249)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEE--EEECCCSSCEEEEEE
T ss_pred EEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee--eecCCCccceEEEEE
Confidence 112357889999999999999999999999987532 334568899999999
Q ss_pred ecCCCeeEEEEe
Q 039044 181 FPDQQGFLVCIH 192 (194)
Q Consensus 181 ~p~~~~l~~~~~ 192 (194)
+|+++.+++++.
T Consensus 891 spdg~~l~s~s~ 902 (1249)
T 3sfz_A 891 SPDGSSFLTASD 902 (1249)
T ss_dssp CTTSSEEEEEET
T ss_pred CCCCCEEEEEeC
Confidence 999999998864
No 103
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9e-30 Score=186.58 Aligned_cols=182 Identities=8% Similarity=0.013 Sum_probs=140.4
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCccc------------------------cc-ccccccCCCCCeeEEEE
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGV------------------------AS-VPKASISHDHPVLCSTW 55 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~------------------------~~-~~~~~~~~~~~i~~~~~ 55 (194)
+.|.+++|+|||+++|+++.|++|+ |........ .. .......|...|.+++|
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vaw 93 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKP 93 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEE
T ss_pred ccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEE
Confidence 3688999999999999999999996 433221100 00 00111145788999999
Q ss_pred ecCCCeEEEecCCCeEEEEecCCCCceEEeccCCC-----cEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc-------
Q 039044 56 KDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDA-----PIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP------- 123 (194)
Q Consensus 56 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~------- 123 (194)
+|+|++|++++.||.|++||.+. .+..+. |.. .+.+++|+|+|++|++++.||+|++||+..+..
T Consensus 94 SPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~ 170 (588)
T 2j04_A 94 SPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYF 170 (588)
T ss_dssp CSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEE
T ss_pred CCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccccee
Confidence 99999999999999999999544 555556 665 599999999999999999999999999998753
Q ss_pred eeEEe-------cCCeEEEEecCCCEEEEEcCCCcEEEEECCCCCee--eEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 124 VHTQQ-------LPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTE--FKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 124 ~~~~~-------~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~--~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
+.++. ..+.+++|+|++ +++++.|+.|++||+.+.... ...+...|...|.+++|+ |+.+++++
T Consensus 171 l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~ 243 (588)
T 2j04_A 171 ESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC 243 (588)
T ss_dssp EEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC
T ss_pred eeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe
Confidence 34442 245688999999 888899999999999876631 233434577899999999 67888775
No 104
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=2.1e-29 Score=189.76 Aligned_cols=186 Identities=16% Similarity=0.159 Sum_probs=157.5
Q ss_pred eeeEEEcC--CCCEEEEeeCCCeEEEEecccCCc---ccccccccccCCCCCeeEEEEecCCCeEEEecCC----CeEEE
Q 039044 3 VSSLCFSP--KANILVATSWDNQVRCWEISRGGT---GVASVPKASISHDHPVLCSTWKDDGTTVFSGGCD----KQVKM 73 (194)
Q Consensus 3 v~~~~~~p--~~~~l~~~~~d~~i~i~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~~ 73 (194)
|++++|+| ++++|++|+.||.|++||+.++.. ...........|..+|.+++|+|++++|++++.+ +.|.+
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~ 146 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFIS 146 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEE
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEE
Confidence 99999999 999999999999999999974410 0012344556789999999999999999999987 68888
Q ss_pred EecCCCCceEEeccCCCcEEEEEecCCCC-EEEEeeCCCeEEEEeCCCCCceeEEec------CCeEEEEecC-CCEEEE
Q 039044 74 WPLLSGGQPVTVAMHDAPIKEVAWIPEMN-LLATGSWDKTLKYWDTRQPNPVHTQQL------PDRCYALTVR-YPLMVV 145 (194)
Q Consensus 74 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~vwd~~~~~~~~~~~~------~~~~~~~~~~-~~~l~~ 145 (194)
|| .++.+..+..|...|.+++|+|+++ ++++++.|+.|++||+++++.+..+.. ...+++|+|+ ++++++
T Consensus 147 ~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 224 (615)
T 1pgu_A 147 WD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVIT 224 (615)
T ss_dssp TT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEE
T ss_pred EE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEE
Confidence 88 5677888899999999999999987 899999999999999999888777654 3468899999 999999
Q ss_pred EcCCCcEEEEECCCCCeeeEEeeC---CCcceeeEEEEecCCCeeEEEEe
Q 039044 146 GTADRNLVVFNLQNPQTEFKRINS---PLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 146 ~~~dg~v~~~d~~~~~~~~~~~~~---~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++.||.|++||+++++.. ..... .|...|.+++|+ +++.++++..
T Consensus 225 ~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~ 272 (615)
T 1pgu_A 225 VGSDRKISCFDGKSGEFL-KYIEDDQEPVQGGIFALSWL-DSQKFATVGA 272 (615)
T ss_dssp EETTCCEEEEETTTCCEE-EECCBTTBCCCSCEEEEEES-SSSEEEEEET
T ss_pred EeCCCeEEEEECCCCCEe-EEecccccccCCceEEEEEc-CCCEEEEEcC
Confidence 999999999999987643 33323 688899999999 9999998863
No 105
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=8.3e-30 Score=181.66 Aligned_cols=156 Identities=12% Similarity=0.096 Sum_probs=129.7
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCC----eEEEEec
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDK----QVKMWPL 76 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----~i~~~d~ 76 (194)
+.|.+++|+|+++++++++.++ +.+|+..++.. ........|...+.+++|+|+++++++++.|+ .+++|++
T Consensus 177 ~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~---~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~ 252 (365)
T 4h5i_A 177 GEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSC---IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISI 252 (365)
T ss_dssp SCCCEEEECTTSSEEEEECSSC-EEEEETTTCCE---EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEE
T ss_pred CceEEEEEccCCceEEecccee-EEEEEeccCcc---eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccc
Confidence 3689999999999999998654 66666655542 22234456888999999999999999998887 6888998
Q ss_pred CCCCc----eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEE-ec---CCeEEEEecCCCEEEEEcC
Q 039044 77 LSGGQ----PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ-QL---PDRCYALTVRYPLMVVGTA 148 (194)
Q Consensus 77 ~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~-~~---~~~~~~~~~~~~~l~~~~~ 148 (194)
..... ...+..|...|++++|+|+|++|++++.|++|+|||+++++++..+ .. .+.+++|+|++++|++|+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~ 332 (365)
T 4h5i_A 253 KSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSA 332 (365)
T ss_dssp ETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEET
T ss_pred ccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeC
Confidence 76643 3356789999999999999999999999999999999999988775 32 4578999999999999999
Q ss_pred CCcEEEEECCCC
Q 039044 149 DRNLVVFNLQNP 160 (194)
Q Consensus 149 dg~v~~~d~~~~ 160 (194)
|++|+|||+...
T Consensus 333 D~tvrvw~ip~~ 344 (365)
T 4h5i_A 333 ANTIHIIKLPLN 344 (365)
T ss_dssp TSEEEEEECCTT
T ss_pred CCeEEEEEcCCC
Confidence 999999999754
No 106
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-29 Score=198.40 Aligned_cols=182 Identities=9% Similarity=0.017 Sum_probs=146.2
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
++|.+++|+| +++|++++.|++|++||+.++.. ...+ .|...|++++|+|+++++++|+.||.|++||+++++
T Consensus 59 ~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~-----~~~~-~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~ 131 (902)
T 2oaj_A 59 SAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKV-----LTTV-FVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQ 131 (902)
T ss_dssp CCEEEEEEET-TTEEEEEETTCEEEEEETTTCSE-----EEEE-ECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTE
T ss_pred CCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcE-----EEEE-cCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCc
Confidence 3689999999 88999999999999999987643 2222 366789999999999999999999999999998876
Q ss_pred ce-----------EEeccCCCcEEEEEecCC-CCEEEEeeCCCeEEEEeCCCCCceeEEecC------------------
Q 039044 81 QP-----------VTVAMHDAPIKEVAWIPE-MNLLATGSWDKTLKYWDTRQPNPVHTQQLP------------------ 130 (194)
Q Consensus 81 ~~-----------~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~------------------ 130 (194)
.. ..+.+|...|.+++|+|+ +..+++++.|+.| +||+++++.+..+..+
T Consensus 132 ~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h 210 (902)
T 2oaj_A 132 LSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKR 210 (902)
T ss_dssp EEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCB
T ss_pred cccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCccccccccccc
Confidence 43 223568899999999995 5789999999999 9999998877666533
Q ss_pred ---CeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEee-----C-----------CCcceeeEEEEec----CC-Ce
Q 039044 131 ---DRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRIN-----S-----------PLKYQTRCVAAFP----DQ-QG 186 (194)
Q Consensus 131 ---~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~-----~-----------~~~~~v~~i~~~p----~~-~~ 186 (194)
..+++|+|++++|++++.||.|++||+++++....... . .+...|.+++|+| ++ ..
T Consensus 211 ~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~l 290 (902)
T 2oaj_A 211 TPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSL 290 (902)
T ss_dssp CCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEE
T ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEE
Confidence 57899999999999999999999999998764322111 0 1345799999964 44 34
Q ss_pred eEEE
Q 039044 187 FLVC 190 (194)
Q Consensus 187 l~~~ 190 (194)
+++|
T Consensus 291 l~sg 294 (902)
T 2oaj_A 291 LISH 294 (902)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 5555
No 107
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=1.3e-28 Score=173.47 Aligned_cols=179 Identities=15% Similarity=0.182 Sum_probs=149.3
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEeccc---------CCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeE
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISR---------GGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQV 71 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~---------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 71 (194)
+.|.+++|+| ++.|++++.|+.|++||+.. ... .... .|...+.+++|+|++ +++++.|+.|
T Consensus 102 ~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-----~~~~-~~~~~v~~~~~~~~~--l~~~~~d~~i 172 (342)
T 1yfq_A 102 LGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN-----SNNT-KVKNKIFTMDTNSSR--LIVGMNNSQV 172 (342)
T ss_dssp SCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESC-----SSSS-SSCCCEEEEEECSSE--EEEEESTTEE
T ss_pred CceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCe-----eeEE-eeCCceEEEEecCCc--EEEEeCCCeE
Confidence 3689999999 99999999999999999986 321 2222 388899999999887 9999999999
Q ss_pred EEEecCC-CCc--eEEeccCCCcEEEEEecC-CCCEEEEeeCCCeEEEEeCCCC------CceeEEec------------
Q 039044 72 KMWPLLS-GGQ--PVTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQP------NPVHTQQL------------ 129 (194)
Q Consensus 72 ~~~d~~~-~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~vwd~~~~------~~~~~~~~------------ 129 (194)
++||+++ +.. ......|...+.+++|+| +++++++++.||.+++||++.. +....+..
T Consensus 173 ~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (342)
T 1yfq_A 173 QWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAY 252 (342)
T ss_dssp EEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCC
T ss_pred EEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccce
Confidence 9999988 543 334456888999999999 9999999999999999999876 55555543
Q ss_pred CCeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCC-cceeeEEEEecCCCeeEEEEe
Q 039044 130 PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPL-KYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 130 ~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~-~~~v~~i~~~p~~~~l~~~~~ 192 (194)
...+++|+|++++|++++.||.|++||+++++. ...+ ..| ..+|.+++ |++++|++++.
T Consensus 253 ~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~-~~~h~~~v~~~~--~~~~~l~s~s~ 312 (342)
T 1yfq_A 253 PVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK-IKNF-AKFNEDSVVKIA--CSDNILCLATS 312 (342)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTTTEE-EEEC-CCCSSSEEEEEE--ECSSEEEEEEE
T ss_pred eEEEEEEcCCCCEEEEecCCceEEEEcCccHhH-hhhh-hcccCCCceEec--CCCCeEEEEec
Confidence 456889999999999999999999999998764 3333 445 88999999 99999999875
No 108
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=1.4e-28 Score=180.18 Aligned_cols=187 Identities=16% Similarity=0.192 Sum_probs=154.0
Q ss_pred CCeeeEEEc--CCCCEEEEeeCCCeEEEEecccCCccccc------------------ccccccCCCCCeeEEEEecCCC
Q 039044 1 DSVSSLCFS--PKANILVATSWDNQVRCWEISRGGTGVAS------------------VPKASISHDHPVLCSTWKDDGT 60 (194)
Q Consensus 1 ~~v~~~~~~--p~~~~l~~~~~d~~i~i~~~~~~~~~~~~------------------~~~~~~~~~~~i~~~~~~~~~~ 60 (194)
++|.+++|+ |+++++++|+.|+.|++||+......... ......+|...+.++ +++++
T Consensus 204 ~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~ 281 (464)
T 3v7d_B 204 STVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGN 281 (464)
T ss_dssp SCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETT
T ss_pred CccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCC
Confidence 368899998 57799999999999999999876421100 122445677777776 67789
Q ss_pred eEEEecCCCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecCC-eEEEEecC
Q 039044 61 TVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD-RCYALTVR 139 (194)
Q Consensus 61 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~-~~~~~~~~ 139 (194)
++++|+.|+.|++||+++++.+..+.+|...|.+++|+|+++++++++.|+.|++||+++++++..+..+. ...++..+
T Consensus 282 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 361 (464)
T 3v7d_B 282 IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS 361 (464)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999888876543 33445556
Q ss_pred CCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 140 YPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 140 ~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+.++++++.||.|++||+++....... .+...+..++|+|+++.+++|..
T Consensus 362 ~~~l~s~s~dg~v~vwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~d 411 (464)
T 3v7d_B 362 DKFLVSAAADGSIRGWDANDYSRKFSY---HHTNLSAITTFYVSDNILVSGSE 411 (464)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEE---ECTTCCCEEEEEECSSEEEEEET
T ss_pred CCEEEEEeCCCcEEEEECCCCceeeee---cCCCCccEEEEEeCCCEEEEecC
Confidence 899999999999999999987654332 25567888999999999999874
No 109
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.8e-28 Score=169.67 Aligned_cols=177 Identities=18% Similarity=0.274 Sum_probs=146.2
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCC-
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSG- 79 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~- 79 (194)
++|++++| |++++|++|+.||.|++||+.+.. .......|...+.+++|+|++++|++++.|+.|++|++...
T Consensus 19 ~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 92 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW-----LGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATS 92 (313)
T ss_dssp SCEEEEEE-EETTEEEEEETTSEEEEEEESSSE-----EEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCT
T ss_pred CCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE-----EEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecC
Confidence 47999999 999999999999999999997653 34556678999999999999999999999999999998765
Q ss_pred --CceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEec-CCCEEEEEcCCCcEE
Q 039044 80 --GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTV-RYPLMVVGTADRNLV 153 (194)
Q Consensus 80 --~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~-~~~~l~~~~~dg~v~ 153 (194)
+.+..+..|...|.+++| +++++++++.|+.|++|| ..+....+.. ....+.+.| +++.+++++.||.|+
T Consensus 93 ~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~ 168 (313)
T 3odt_A 93 GEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIK 168 (313)
T ss_dssp TSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEE
T ss_pred CCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEE
Confidence 456678889999999999 567999999999999999 4444444443 345777777 899999999999999
Q ss_pred EEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 154 VFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 154 ~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
+||... ........+...+.+++|+|++. ++++.
T Consensus 169 i~d~~~---~~~~~~~~~~~~i~~~~~~~~~~-~~~~~ 202 (313)
T 3odt_A 169 LWQNDK---VIKTFSGIHNDVVRHLAVVDDGH-FISCS 202 (313)
T ss_dssp EEETTE---EEEEECSSCSSCEEEEEEEETTE-EEEEE
T ss_pred EEecCc---eEEEEeccCcccEEEEEEcCCCe-EEEcc
Confidence 999432 33444445888999999999999 66654
No 110
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=4.8e-29 Score=187.85 Aligned_cols=186 Identities=14% Similarity=0.137 Sum_probs=153.5
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCC-eeEEEEec--CCCeEEEecCCCeEEEEecC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHP-VLCSTWKD--DGTTVFSGGCDKQVKMWPLL 77 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~--~~~~l~~~~~d~~i~~~d~~ 77 (194)
+.|.+++|+|++++|++++ ++.|++|++.++... ......+.+|... |.+++|+| ++++|++++.||.|++||+.
T Consensus 19 ~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~-~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~ 96 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSK-VPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWT 96 (615)
T ss_dssp TCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCS-SCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEE
T ss_pred CceeEEEECCCCCEEEEec-CCeEEEEECCCCCCc-cccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCC
Confidence 3688999999999999998 889999999865110 0124566789999 99999999 99999999999999999997
Q ss_pred CC--------CceEEeccCCCcEEEEEecCCCCEEEEeeCC----CeEEEEeCCCCCceeEEec---CCeEEEEecCCC-
Q 039044 78 SG--------GQPVTVAMHDAPIKEVAWIPEMNLLATGSWD----KTLKYWDTRQPNPVHTQQL---PDRCYALTVRYP- 141 (194)
Q Consensus 78 ~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~- 141 (194)
++ +....+..|...|.+++|+|++++|++++.+ +.|++|| .++.+..+.. ...+++|+|+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~ 174 (615)
T 1pgu_A 97 FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPM 174 (615)
T ss_dssp EEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSC
T ss_pred CCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCc
Confidence 54 5566778899999999999999999999987 6899998 4555555443 446889999998
Q ss_pred EEEEEcCCCcEEEEECCCCCeeeEEeeCCCcc---eeeEEEEecC-CCeeEEEEe
Q 039044 142 LMVVGTADRNLVVFNLQNPQTEFKRINSPLKY---QTRCVAAFPD-QQGFLVCIH 192 (194)
Q Consensus 142 ~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~---~v~~i~~~p~-~~~l~~~~~ 192 (194)
.+++++.|+.|++||+++.+. .. ....|.. .+.+++|+|+ +++++++..
T Consensus 175 ~l~~~~~d~~v~vwd~~~~~~-~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 227 (615)
T 1pgu_A 175 RSMTVGDDGSVVFYQGPPFKF-SA-SDRTHHKQGSFVRDVEFSPDSGEFVITVGS 227 (615)
T ss_dssp EEEEEETTTEEEEEETTTBEE-EE-EECSSSCTTCCEEEEEECSTTCCEEEEEET
T ss_pred EEEEEeCCCcEEEEeCCCcce-ee-eecccCCCCceEEEEEECCCCCCEEEEEeC
Confidence 899999999999999987653 22 3345667 8999999999 999998763
No 111
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1.8e-28 Score=174.21 Aligned_cols=182 Identities=12% Similarity=0.124 Sum_probs=139.4
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeE-EEecCCCeEEEEecCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV-FSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~ 79 (194)
++|++++|+|++++|++|+.++ +++|++..... ... .+...+..+++.++++.+ ++++.|+.|++||..++
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~ 91 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAH-----IMS--QEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKK 91 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSE-EEEEEETTEEE-----EEE--EECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTT
T ss_pred CceEEEEECCCCCEEEEEcCCE-EEEEecCCcce-----eee--eecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCC
Confidence 4689999999999999998775 78999876532 111 122247788999988877 56788899999999999
Q ss_pred CceEEeccCCCcEEEEEecCCC-----------------------------------CEEEE--eeCCCeEEEEeCCCCC
Q 039044 80 GQPVTVAMHDAPIKEVAWIPEM-----------------------------------NLLAT--GSWDKTLKYWDTRQPN 122 (194)
Q Consensus 80 ~~~~~~~~~~~~v~~~~~~~~~-----------------------------------~~l~~--~~~d~~v~vwd~~~~~ 122 (194)
+.+..+. +...|.+++|+++. .+++. ++.||.|++||+++++
T Consensus 92 ~~~~~~~-~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~ 170 (355)
T 3vu4_A 92 QDVSRIK-VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSG 170 (355)
T ss_dssp EEEEEEE-CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC--
T ss_pred cEEEEEE-CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCC
Confidence 8888776 66788888887652 23333 4678888888888654
Q ss_pred ---------------c-eeEEe---cCCeEEEEecCCCEEEEEcCCCc-EEEEECCCCCeeeEEeeCC-CcceeeEEEEe
Q 039044 123 ---------------P-VHTQQ---LPDRCYALTVRYPLMVVGTADRN-LVVFNLQNPQTEFKRINSP-LKYQTRCVAAF 181 (194)
Q Consensus 123 ---------------~-~~~~~---~~~~~~~~~~~~~~l~~~~~dg~-v~~~d~~~~~~~~~~~~~~-~~~~v~~i~~~ 181 (194)
+ +..+. ....+++|+|++++|++|+.|++ |++||+++++.. ..+..+ |...|.+++|+
T Consensus 171 ~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~-~~~~~g~h~~~v~~~~~s 249 (355)
T 3vu4_A 171 SATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLV-REFRRGLDRADVVDMKWS 249 (355)
T ss_dssp ----------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEE-EEEECTTCCSCEEEEEEC
T ss_pred ccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEE-EEEEcCCCCCcEEEEEEC
Confidence 1 33333 34578999999999999999998 999999988753 444433 88899999999
Q ss_pred cCCCeeEEEEe
Q 039044 182 PDQQGFLVCIH 192 (194)
Q Consensus 182 p~~~~l~~~~~ 192 (194)
|++++|++++.
T Consensus 250 ~~~~~l~s~s~ 260 (355)
T 3vu4_A 250 TDGSKLAVVSD 260 (355)
T ss_dssp TTSCEEEEEET
T ss_pred CCCCEEEEEEC
Confidence 99999999864
No 112
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.4e-28 Score=168.70 Aligned_cols=179 Identities=18% Similarity=0.285 Sum_probs=147.2
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
+.|.+++|+|++++|++++.|+.+++|++...... ........|...+.++.| +++++++++.|+.|++|| .++
T Consensus 60 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~ 133 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGE--DPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGS 133 (313)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTS--CC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTE
T ss_pred ccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCC--CcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCc
Confidence 36899999999999999999999999999765321 223455679999999999 577999999999999999 566
Q ss_pred ceEEeccCCCcEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCCceeEEe----cCCeEEEEecCCCEEEEEcCCCcEEEE
Q 039044 81 QPVTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVHTQQ----LPDRCYALTVRYPLMVVGTADRNLVVF 155 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~dg~v~~~ 155 (194)
....+..|...+.+++|.| +++++++++.|+.|++||.. +....+. ....+++++|++. +++++.||.|++|
T Consensus 134 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~ 210 (313)
T 3odt_A 134 LVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND--KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLV 210 (313)
T ss_dssp EEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT--EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEE
T ss_pred EEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC--ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEE
Confidence 7778888999999999998 89999999999999999943 3343333 3456889999988 9999999999999
Q ss_pred ECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 156 NLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 156 d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
|+++.+.. ... ..|...+.+++|+|++. ++++.
T Consensus 211 d~~~~~~~-~~~-~~~~~~i~~~~~~~~~~-l~~~~ 243 (313)
T 3odt_A 211 DMHTGDVL-RTY-EGHESFVYCIKLLPNGD-IVSCG 243 (313)
T ss_dssp ETTTCCEE-EEE-ECCSSCEEEEEECTTSC-EEEEE
T ss_pred ECCchhhh-hhh-hcCCceEEEEEEecCCC-EEEEe
Confidence 99987643 333 35788999999999994 55554
No 113
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=9.6e-28 Score=174.99 Aligned_cols=180 Identities=18% Similarity=0.273 Sum_probs=148.0
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
+|.+++| +++.+++|+.||.|++||+.+.. .......|...+.++.| +++++++++.|+.|++||+++++.
T Consensus 241 ~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~-----~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~ 311 (445)
T 2ovr_B 241 AVRCVQY--DGRRVVSGAYDFMVKVWDPETET-----CLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNC 311 (445)
T ss_dssp CEEEEEE--CSSCEEEEETTSCEEEEEGGGTE-----EEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCE
T ss_pred cEEEEEE--CCCEEEEEcCCCEEEEEECCCCc-----EeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCE
Confidence 5677777 67788888888888888887763 24455678899999999 788999999999999999999999
Q ss_pred eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec----CCeEEEEecCCCEEEEEcCCCcEEEEEC
Q 039044 82 PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL----PDRCYALTVRYPLMVVGTADRNLVVFNL 157 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~dg~v~~~d~ 157 (194)
+..+..|...+.++.+ +++++++++.||.|++||+++++.+..+.. .....++.++++++++|+.||.|++||+
T Consensus 312 ~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 312 IHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 389 (445)
T ss_dssp EEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEET
T ss_pred EEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEEC
Confidence 9999999999998887 456999999999999999999998887764 2234455667899999999999999999
Q ss_pred CCCCeeeEEe---eCCCcceeeEEEEecCCCeeEEEEe
Q 039044 158 QNPQTEFKRI---NSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 158 ~~~~~~~~~~---~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++++...... ...+...|.+++|+|++..+++|..
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~ 427 (445)
T 2ovr_B 390 KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSR 427 (445)
T ss_dssp TTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECS
T ss_pred CCCceeeeeeccccCCCCceEEEEEecCCEEEEEEccc
Confidence 9887533221 1356788999999999999998753
No 114
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=3.4e-29 Score=180.15 Aligned_cols=153 Identities=16% Similarity=0.082 Sum_probs=122.5
Q ss_pred cCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEec--------CCCeEEEecCCCeEEEEecCCCC
Q 039044 9 SPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD--------DGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 9 ~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
.+++.+|++|+.|++|++||...+..........+.+|.+.|++++|+| ++++|++|+.|++|+|||++++.
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~ 177 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG 177 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc
Confidence 3456689999999999999998875433233456778999999999998 78999999999999999999888
Q ss_pred ceEEeccCCCcEEEEEecCCC-CEEEEeeCCCeEEEEeCCCCCceeEEe----------------------------cCC
Q 039044 81 QPVTVAMHDAPIKEVAWIPEM-NLLATGSWDKTLKYWDTRQPNPVHTQQ----------------------------LPD 131 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~vwd~~~~~~~~~~~----------------------------~~~ 131 (194)
++..+..|...|.+++|+|++ .+|++++.|++|++||+++++...... ...
T Consensus 178 ~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v 257 (393)
T 4gq1_A 178 PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSL 257 (393)
T ss_dssp EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSC
T ss_pred eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccc
Confidence 888888899999999999986 479999999999999998876432211 122
Q ss_pred eEEEEe-cCCCEEEEEcCCCcEEEEECCCCC
Q 039044 132 RCYALT-VRYPLMVVGTADRNLVVFNLQNPQ 161 (194)
Q Consensus 132 ~~~~~~-~~~~~l~~~~~dg~v~~~d~~~~~ 161 (194)
..+.+. ++++.+++++.|+.+++||+...+
T Consensus 258 ~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~ 288 (393)
T 4gq1_A 258 ANVRWIGSDGSGILAMCKSGAWLRWNLFANN 288 (393)
T ss_dssp SEEEEETTTTCEEEEECTTSEEEEEEC----
T ss_pred eeeeeecCCCCEEEEEeCCCCEEEEECccCC
Confidence 456666 799999999999999999998654
No 115
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=2.4e-27 Score=171.81 Aligned_cols=180 Identities=18% Similarity=0.214 Sum_probs=147.1
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCce
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQP 82 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 82 (194)
++.|+|+++ +.|++|. |++|+|||..++.. ........|...|++++|+|++++|++|+.||.|++||+++++.+
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~---~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDI---LQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCCE---EEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCCE---EEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence 467999975 5777776 99999999988753 222344578889999999999999999999999999999999999
Q ss_pred EEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc-eeEEec---CCeEEEEecCCCEEEEEcCCCcEEEEECC
Q 039044 83 VTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP-VHTQQL---PDRCYALTVRYPLMVVGTADRNLVVFNLQ 158 (194)
Q Consensus 83 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~-~~~~~~---~~~~~~~~~~~~~l~~~~~dg~v~~~d~~ 158 (194)
..+.+|...+.+++++ +.++++++.|+.+++||.+.... +..+.. ....+.++|+++++++++.|+.+++||..
T Consensus 183 ~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 183 RNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeec
Confidence 9999999999998874 57999999999999999987553 344433 34678899999999999999999999998
Q ss_pred CCCee--eEEeeCCCcceeeEEEEecCCCeeEE
Q 039044 159 NPQTE--FKRINSPLKYQTRCVAAFPDQQGFLV 189 (194)
Q Consensus 159 ~~~~~--~~~~~~~~~~~v~~i~~~p~~~~l~~ 189 (194)
+.+.. .......+...|.+++|+|++..+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la 293 (420)
T 4gga_A 261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLA 293 (420)
T ss_dssp CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEE
T ss_pred cccccceeeeeecccCCceeeeeeCCCcccEEE
Confidence 76532 22234557888999999998766554
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=5.2e-27 Score=170.72 Aligned_cols=176 Identities=20% Similarity=0.350 Sum_probs=147.8
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
+|.+++| ++++|++|+.||+|++||+.++.. ......|...|.+++|++ +.+++|+.||.|++||++++..
T Consensus 175 ~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~-----~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~ 245 (435)
T 1p22_A 175 SVLCLQY--DERVIITGSSDSTVRVWDVNTGEM-----LNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTD 245 (435)
T ss_dssp CEEEEEC--CSSEEEEEETTSCEEEEESSSCCE-----EEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSC
T ss_pred cEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE-----EEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCC
Confidence 5788888 788999999999999999987743 455668999999999974 5999999999999999998876
Q ss_pred e---EEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecCC-eEEEEecCCCEEEEEcCCCcEEEEEC
Q 039044 82 P---VTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD-RCYALTVRYPLMVVGTADRNLVVFNL 157 (194)
Q Consensus 82 ~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~dg~v~~~d~ 157 (194)
. ..+.+|...|.+++| +++++++++.|+.|++||+++++.+..+..+. ...++.++++++++|+.||.|++||+
T Consensus 246 ~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~ 323 (435)
T 1p22_A 246 ITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 323 (435)
T ss_dssp CEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEET
T ss_pred ceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEEC
Confidence 5 567889999999999 77899999999999999999999888877543 34455567899999999999999999
Q ss_pred CCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 158 QNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++++.. . ....|...|.+++| ++.++++|+.
T Consensus 324 ~~~~~~-~-~~~~h~~~v~~~~~--~~~~l~sg~~ 354 (435)
T 1p22_A 324 ECGACL-R-VLEGHEELVRCIRF--DNKRIVSGAY 354 (435)
T ss_dssp TTCCEE-E-EECCCSSCEEEEEC--CSSEEEEEET
T ss_pred CCCCEE-E-EEeCCcCcEEEEEe--cCCEEEEEeC
Confidence 987642 3 33458888999998 7888888763
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=2.6e-27 Score=168.23 Aligned_cols=183 Identities=18% Similarity=0.133 Sum_probs=137.5
Q ss_pred eeeEEEcCCCCEE-EEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCC----------------------
Q 039044 3 VSSLCFSPKANIL-VATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDG---------------------- 59 (194)
Q Consensus 3 v~~~~~~p~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---------------------- 59 (194)
+..+++.++++.+ ++++.|++|++||..++.. .... .+..++.+++|+++.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~-----~~~~-~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~ 134 (355)
T 3vu4_A 61 LSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQD-----VSRI-KVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRIT 134 (355)
T ss_dssp CCEEEECTTSSEEEEECSSTTEEEEEETTTTEE-----EEEE-ECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSS
T ss_pred eEEEEEcCCCCEEEEEECCccEEEEEECCCCcE-----EEEE-ECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeE
Confidence 5678888888777 5678889999999987642 1111 244566666665532
Q ss_pred -------------CeEEE--ecCCCeEEEEecCCCC----------------ceEEeccCCCcEEEEEecCCCCEEEEee
Q 039044 60 -------------TTVFS--GGCDKQVKMWPLLSGG----------------QPVTVAMHDAPIKEVAWIPEMNLLATGS 108 (194)
Q Consensus 60 -------------~~l~~--~~~d~~i~~~d~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 108 (194)
++++. |+.+|.|++||+++++ .+..+.+|...|++++|+|++++|++++
T Consensus 135 ~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s 214 (355)
T 3vu4_A 135 DDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCS 214 (355)
T ss_dssp CCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEe
Confidence 23443 6789999999998765 2677889999999999999999999999
Q ss_pred CCCe-EEEEeCCCCCceeEEe-c----CCeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEE----------------
Q 039044 109 WDKT-LKYWDTRQPNPVHTQQ-L----PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKR---------------- 166 (194)
Q Consensus 109 ~d~~-v~vwd~~~~~~~~~~~-~----~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~---------------- 166 (194)
.|++ |++||+++++.+..+. . ...+++|+|++++|++++.|++|++||++........
T Consensus 215 ~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (355)
T 3vu4_A 215 QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWS 294 (355)
T ss_dssp TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSC
T ss_pred CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccc
Confidence 9998 9999999999888776 2 3468899999999999999999999999865321110
Q ss_pred -----eeCCCcceeeEEEEecCCCeeEEEE
Q 039044 167 -----INSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 167 -----~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
...........++|+|+++.++++.
T Consensus 295 ~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~ 324 (355)
T 3vu4_A 295 LCNFKLSVDKHVRGCKIAWISESSLVVVWP 324 (355)
T ss_dssp SEEEECCCCTTCCCCEEEESSSSEEEEEET
T ss_pred eeEEEeccCCCCCceEEEEeCCCCEEEEEe
Confidence 1111122346789999999998874
No 118
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=9.9e-28 Score=166.27 Aligned_cols=149 Identities=13% Similarity=0.070 Sum_probs=116.4
Q ss_pred CeeeEEEcC---CCCEEEEeeCCCeEEEEecccCCcccccccccccCC---CCCeeEEEEecCCCeE------------E
Q 039044 2 SVSSLCFSP---KANILVATSWDNQVRCWEISRGGTGVASVPKASISH---DHPVLCSTWKDDGTTV------------F 63 (194)
Q Consensus 2 ~v~~~~~~p---~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l------------~ 63 (194)
.++.++|+| +++.|++|+.|++|+|||+.+++. ...+.+| ...+.+++|+|+++++ +
T Consensus 180 ~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~-----l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~la 254 (356)
T 2w18_A 180 EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQL-----LKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESES 254 (356)
T ss_dssp SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCE-----EEEEECCC---CCCEEEEEEETTEEEEEEC---------
T ss_pred ceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcE-----EEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceee
Confidence 356677777 668899999999999999998853 3334333 3467788999999876 5
Q ss_pred EecCCCeEEEEecCCCCceEEe-----ccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecC---C-eEE
Q 039044 64 SGGCDKQVKMWPLLSGGQPVTV-----AMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP---D-RCY 134 (194)
Q Consensus 64 ~~~~d~~i~~~d~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~---~-~~~ 134 (194)
+|+.|++|++||..+++.+..+ .+|...+.+..+ ++.++++++.|++|+|||+++++.++++..+ . ..+
T Consensus 255 SGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~v 332 (356)
T 2w18_A 255 LRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFV 332 (356)
T ss_dssp ---CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEE
T ss_pred ccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEE
Confidence 6888999999999998876654 356555544444 4788999999999999999999999988643 2 357
Q ss_pred EEecCCCEEEEEcCCCcEEEEEC
Q 039044 135 ALTVRYPLMVVGTADRNLVVFNL 157 (194)
Q Consensus 135 ~~~~~~~~l~~~~~dg~v~~~d~ 157 (194)
+|+|++++|++|+.|++|+|||+
T Consensus 333 afSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 333 KWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EECSSSSEEEEECTTSCEEEEEE
T ss_pred EECCCCCEEEEEECCCcEEEecC
Confidence 99999999999999999999995
No 119
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=1.1e-26 Score=169.10 Aligned_cols=176 Identities=18% Similarity=0.320 Sum_probs=144.6
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.|.++++ +++++++|+.||.|++||+.+.+. ...+.+|...|.+++| ++++|++|+.||.|++||+++++.
T Consensus 135 ~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~-----~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 135 GVYCLQY--DDQKIVSGLRDNTIKIWDKNTLEC-----KRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CEEEEEC--CSSEEEEEESSSCEEEEESSSCCE-----EEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE
T ss_pred cEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeE-----EEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE
Confidence 4666665 789999999999999999987643 4566789999999999 788999999999999999999999
Q ss_pred eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce---eEEecC-CeEEEEecCCCEEEEEcCCCcEEEEEC
Q 039044 82 PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV---HTQQLP-DRCYALTVRYPLMVVGTADRNLVVFNL 157 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~---~~~~~~-~~~~~~~~~~~~l~~~~~dg~v~~~d~ 157 (194)
+..+..|...|.+++|++ .++++++.|+.|++||+++++.. .....+ ....++.++++++++|+.||.|++||+
T Consensus 206 ~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~ 283 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNT 283 (435)
T ss_dssp EEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEET
T ss_pred EEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEEC
Confidence 999999999999999964 59999999999999999987765 233322 234455558999999999999999999
Q ss_pred CCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 158 QNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 158 ~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++++.. ... ..|...+.++.++ ++.+++|..
T Consensus 284 ~~~~~~-~~~-~~~~~~v~~~~~~--~~~l~~g~~ 314 (435)
T 1p22_A 284 STCEFV-RTL-NGHKRGIACLQYR--DRLVVSGSS 314 (435)
T ss_dssp TTCCEE-EEE-ECCSSCEEEEEEE--TTEEEEEET
T ss_pred CcCcEE-EEE-cCCCCcEEEEEeC--CCEEEEEeC
Confidence 987643 333 3577889999884 678887753
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.96 E-value=4e-26 Score=166.44 Aligned_cols=177 Identities=20% Similarity=0.366 Sum_probs=146.2
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.|.+++|+ ++.+++|+.||.|++||+.++.. ......|...+.+++| +++++++|+.||.|++||+++++.
T Consensus 201 ~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~-----~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~ 271 (445)
T 2ovr_B 201 TVRCMHLH--EKRVVSGSRDATLRVWDIETGQC-----LHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETC 271 (445)
T ss_dssp CEEEEEEE--TTEEEEEETTSEEEEEESSSCCE-----EEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEE
T ss_pred cEEEEEec--CCEEEEEeCCCEEEEEECCCCcE-----EEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcE
Confidence 57778875 56788888999999999877642 4456678999999998 688999999999999999999998
Q ss_pred eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecCC-eEEEEecCCCEEEEEcCCCcEEEEECCCC
Q 039044 82 PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD-RCYALTVRYPLMVVGTADRNLVVFNLQNP 160 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~dg~v~~~d~~~~ 160 (194)
+..+..|...|.+++| ++.++++++.|+.|++||+++++.+..+..+. ...++.++++++++++.||.|++||++++
T Consensus 272 ~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~~ 349 (445)
T 2ovr_B 272 LHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG 349 (445)
T ss_dssp EEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTC
T ss_pred eEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCCC
Confidence 8899999999999999 78899999999999999999999888776543 45567778899999999999999999987
Q ss_pred CeeeEEeeC--CCcceeeEEEEecCCCeeEEEEe
Q 039044 161 QTEFKRINS--PLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 161 ~~~~~~~~~--~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+.. ..... .+...|.+++|+ ++++++|+.
T Consensus 350 ~~~-~~~~~~~~~~~~v~~~~~~--~~~l~s~~~ 380 (445)
T 2ovr_B 350 QCL-QTLQGPNKHQSAVTCLQFN--KNFVITSSD 380 (445)
T ss_dssp CEE-EEECSTTSCSSCEEEEEEC--SSEEEEEET
T ss_pred cEE-EEEccCCCCCCCEEEEEEC--CCEEEEEeC
Confidence 643 33322 377889999995 578887763
No 121
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1.4e-26 Score=168.10 Aligned_cols=186 Identities=13% Similarity=0.076 Sum_probs=151.7
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.+.+++|+|++.++++++.++.|++||+.+++............|...+.+++|+|+++++++++.|+.|++||+++++.
T Consensus 124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~ 203 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAY 203 (433)
T ss_dssp CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCE
T ss_pred CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceE
Confidence 35689999988888888889999999998775422111224557888999999999999999999999999999999998
Q ss_pred eEEeccCCCcEEEEEecCCCCEEEEe-eCCCeEEEEeCCCCCceeEEecC--CeEEEEecCCCEEEEEc--------CCC
Q 039044 82 PVTVAMHDAPIKEVAWIPEMNLLATG-SWDKTLKYWDTRQPNPVHTQQLP--DRCYALTVRYPLMVVGT--------ADR 150 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~--------~dg 150 (194)
+..+..|...+.+++|+|++++++++ +.|+.|++||+++++.+..+... ...++++|+++.+++++ .||
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg 283 (433)
T 3bws_A 204 KATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGG 283 (433)
T ss_dssp EEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCE
T ss_pred EEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCC
Confidence 88888899999999999999987554 47999999999988877666543 35788999999999888 588
Q ss_pred cEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 151 NLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 151 ~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
.|++||+++++.. ... .+...+.+++|+|+++.++++
T Consensus 284 ~i~~~d~~~~~~~-~~~--~~~~~~~~~~~~~~g~~l~~~ 320 (433)
T 3bws_A 284 RLGIYSMDKEKLI-DTI--GPPGNKRHIVSGNTENKIYVS 320 (433)
T ss_dssp EEEEEETTTTEEE-EEE--EEEECEEEEEECSSTTEEEEE
T ss_pred eEEEEECCCCcEE-eec--cCCCCcceEEECCCCCEEEEE
Confidence 9999999987532 222 245578999999999876654
No 122
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.96 E-value=2.8e-27 Score=171.98 Aligned_cols=187 Identities=13% Similarity=0.073 Sum_probs=142.1
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcc----------cccccccccCCCCCeeEEEEecCCCeEE----EecC
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTG----------VASVPKASISHDHPVLCSTWKDDGTTVF----SGGC 67 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~----------~~~~~~~~~~~~~~i~~~~~~~~~~~l~----~~~~ 67 (194)
.++.+++++++.++++++.|+ +++|+....... ..........+...+.+++|+|++++|+ +|+.
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~ 116 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY 116 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence 367899999999999999887 899886532100 0000111234567899999999999999 8899
Q ss_pred CCeEEEEecCCC--------Cc---eEEeccCCCcEEEEEecCC-CCEEEEeeCCCeEEEEeCCCCCceeEEe---cCCe
Q 039044 68 DKQVKMWPLLSG--------GQ---PVTVAMHDAPIKEVAWIPE-MNLLATGSWDKTLKYWDTRQPNPVHTQQ---LPDR 132 (194)
Q Consensus 68 d~~i~~~d~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~vwd~~~~~~~~~~~---~~~~ 132 (194)
|+.|++||++++ +. ...+.+|...|.+++|+|+ +.+|++++.||+|++||++++....... ....
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~ 196 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVT 196 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEE
T ss_pred CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCcee
Confidence 999999998654 22 3345678999999999997 8899999999999999999886554332 3567
Q ss_pred EEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeC------CCcceeeEEEEecCCCeeEEEE
Q 039044 133 CYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINS------PLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 133 ~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~------~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
+++|+|++++|++|+.||.|++||++ ++.. ..... .|...+.++.|++++.++++..
T Consensus 197 ~v~wspdg~~lasgs~dg~v~iwd~~-~~~~-~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~ 259 (434)
T 2oit_A 197 SVCWSPKGKQLAVGKQNGTVVQYLPT-LQEK-KVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYA 259 (434)
T ss_dssp EEEECTTSSCEEEEETTSCEEEECTT-CCEE-EEECCCTTCCTTSCEEEEEEEEEETTEEEEEEE
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEccC-Cccc-ccccCCcccCCCCceeEEEEEEecCceEEEEEc
Confidence 89999999999999999999999998 3322 22211 1234899999999988876654
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=8.1e-26 Score=162.09 Aligned_cols=181 Identities=15% Similarity=0.122 Sum_probs=144.7
Q ss_pred CeeeEEEcCCCCEE-EEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEE-EecCCCeEEEEecCCC
Q 039044 2 SVSSLCFSPKANIL-VATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVF-SGGCDKQVKMWPLLSG 79 (194)
Q Consensus 2 ~v~~~~~~p~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~ 79 (194)
.+.+++|+|+++.+ ++++.|+.|++||+.+++. .... .+...+.+++|+|++++|+ ++..++.|++||+.++
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~-----~~~~-~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~ 106 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV-----IATV-PAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN 106 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE-----EEEE-ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCCeE-----EEEE-ECCCCccceEECCCCCEEEEEECCCCEEEEEECCCC
Confidence 47899999999876 6777899999999987642 2222 2334899999999999775 5557799999999998
Q ss_pred CceEEeccCCCcEEEEEecCCCCEE-EEeeCCCeEEEEeCCCCCceeEEecC--CeEEEEecCCCEE-EEEcCCCcEEEE
Q 039044 80 GQPVTVAMHDAPIKEVAWIPEMNLL-ATGSWDKTLKYWDTRQPNPVHTQQLP--DRCYALTVRYPLM-VVGTADRNLVVF 155 (194)
Q Consensus 80 ~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~l-~~~~~dg~v~~~ 155 (194)
+.+..+.. ...+.+++|+|+++++ ++++.++.|++||+++++.+..+..+ ...++++|+++.+ ++++.++.|++|
T Consensus 107 ~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~ 185 (391)
T 1l0q_A 107 TVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVI 185 (391)
T ss_dssp EEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred eEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEE
Confidence 88777764 4578999999999977 67788999999999998877766543 4678999999887 567889999999
Q ss_pred ECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 156 NLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 156 d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
|+++.+.. .... +...+.+++|+|++++++++..
T Consensus 186 d~~~~~~~-~~~~--~~~~~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 186 DTVTNSVI-DTVK--VEAAPSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp ETTTTEEE-EEEE--CSSEEEEEEECTTSSEEEEEEE
T ss_pred ECCCCeEE-EEEe--cCCCccceEECCCCCEEEEEec
Confidence 99987532 2232 4567899999999999988763
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=1.2e-25 Score=163.17 Aligned_cols=182 Identities=10% Similarity=0.038 Sum_probs=148.9
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEE-EecCCCeEEEEecCCCC
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVF-SGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~ 80 (194)
.|.+++|+|+++++++++.|+.|++||+.+... ......|...+.+++|+|+++.++ +++.++.|++||+++++
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~ 245 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAY-----KATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL 245 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCE-----EEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceE-----EEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc
Confidence 578999999999999999999999999987642 344457888999999999999885 55589999999999888
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEee--------CCCeEEEEeCCCCCceeEE--ecCCeEEEEecCCCEE-EEEcCC
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGS--------WDKTLKYWDTRQPNPVHTQ--QLPDRCYALTVRYPLM-VVGTAD 149 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~~v~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~l-~~~~~d 149 (194)
.+..+.. ...+.+++|+|+++++++++ .|+.|++||+++++.+... ......++++|+++.+ ++++.+
T Consensus 246 ~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~ 324 (433)
T 3bws_A 246 EIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCC 324 (433)
T ss_dssp EEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTT
T ss_pred EEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCC
Confidence 7777664 45699999999999999888 4889999999988776655 3355688999999755 566889
Q ss_pred CcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 150 RNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 150 g~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+.|++||+++.+.. .... +...+.+++|+|+++.++++..
T Consensus 325 ~~v~v~d~~~~~~~-~~~~--~~~~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 325 SKIEVYDLKEKKVQ-KSIP--VFDKPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp TEEEEEETTTTEEE-EEEE--CSSSEEEEEECTTSSEEEEEEC
T ss_pred CEEEEEECCCCcEE-EEec--CCCCCCeEEEcCCCCEEEEEec
Confidence 99999999976532 3332 4567899999999999888764
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=6.9e-25 Score=158.74 Aligned_cols=180 Identities=13% Similarity=0.152 Sum_probs=141.8
Q ss_pred CeeeEEEcCCCCEEEEeeCCC---eEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEE-EecCCC--eEEEEe
Q 039044 2 SVSSLCFSPKANILVATSWDN---QVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVF-SGGCDK--QVKMWP 75 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~---~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~--~i~~~d 75 (194)
.|.+++|+|+++.|++++.++ .|++||+.++.. ..+..+...+.+++|+|+|++|+ +++.++ .|++||
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~------~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d 253 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV------RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMD 253 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE------EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE------EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEE
Confidence 688999999999999999875 999999987642 34456778899999999999887 666655 499999
Q ss_pred cCCCCceEEeccCCCcEEEEEecCCCCEEEEeeC-CC--eEEEEeCCCCCceeEEe--cCCeEEEEecCCCEEEEEcCC-
Q 039044 76 LLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSW-DK--TLKYWDTRQPNPVHTQQ--LPDRCYALTVRYPLMVVGTAD- 149 (194)
Q Consensus 76 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~d- 149 (194)
+.+++. ..+..|...+.+++|+|+|++|++++. ++ .|.+||+.+++...... .....++|+|++++|++++.+
T Consensus 254 ~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~ 332 (415)
T 2hqs_A 254 LASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNG 332 (415)
T ss_dssp TTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECS
T ss_pred CCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcC
Confidence 988765 567778889999999999999988876 44 68888998776432211 223568999999999988764
Q ss_pred --CcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 150 --RNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 150 --g~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
..|++||+.+++. ..+.. + ..+.+++|+|+|+.|+++..
T Consensus 333 g~~~i~~~d~~~~~~--~~l~~-~-~~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 333 GQQHIAKQDLATGGV--QVLSS-T-FLDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp SCEEEEEEETTTCCE--EECCC-S-SSCEEEEECTTSSEEEEEEE
T ss_pred CceEEEEEECCCCCE--EEecC-C-CCcCCeEEcCCCCEEEEEEc
Confidence 5799999998764 22322 3 27899999999999988764
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=8.6e-25 Score=156.75 Aligned_cols=179 Identities=14% Similarity=0.114 Sum_probs=142.3
Q ss_pred CeeeEEEcCCCCEEEE-eeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeE-EEecCCCeEEEEecCCC
Q 039044 2 SVSSLCFSPKANILVA-TSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV-FSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~-~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~ 79 (194)
.|.+++|+|+++.|+. ++.++.|++||+.++.. .... .+...+.+++|+|+++.+ ++++.++.|++||+.++
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~-----~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 148 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV-----AGTV-KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK 148 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-----EEEE-ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeE-----EEEE-eCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 5789999999997754 45679999999987642 2222 344578999999999977 68888999999999998
Q ss_pred CceEEeccCCCcEEEEEecCCCCEE-EEeeCCCeEEEEeCCCCCceeEEecC--CeEEEEecCCCEEEEEc---CCCcEE
Q 039044 80 GQPVTVAMHDAPIKEVAWIPEMNLL-ATGSWDKTLKYWDTRQPNPVHTQQLP--DRCYALTVRYPLMVVGT---ADRNLV 153 (194)
Q Consensus 80 ~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~---~dg~v~ 153 (194)
+.+..+..+ ..+..++|+|+++++ ++++.++.|++||+++++........ ...++++|+++++++++ .++.|+
T Consensus 149 ~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~ 227 (391)
T 1l0q_A 149 AVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVS 227 (391)
T ss_dssp EEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEE
T ss_pred cEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEE
Confidence 887777654 567999999999887 56778899999999998877666544 35788999999999888 689999
Q ss_pred EEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 154 VFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 154 ~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
+||+++++. ...+.. ...+.+++|+|++++++++
T Consensus 228 ~~d~~~~~~-~~~~~~--~~~~~~~~~s~dg~~l~~s 261 (391)
T 1l0q_A 228 MIDTGTNKI-TARIPV--GPDPAGIAVTPDGKKVYVA 261 (391)
T ss_dssp EEETTTTEE-EEEEEC--CSSEEEEEECTTSSEEEEE
T ss_pred EEECCCCeE-EEEEec--CCCccEEEEccCCCEEEEE
Confidence 999998754 333332 2357899999999988654
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.95 E-value=1.2e-25 Score=163.49 Aligned_cols=158 Identities=13% Similarity=0.128 Sum_probs=124.2
Q ss_pred CeeeEEEcCCCCEEE----EeeCCCeEEEEecccCC-----c-ccccccccccCCCCCeeEEEEecC-CCeEEEecCCCe
Q 039044 2 SVSSLCFSPKANILV----ATSWDNQVRCWEISRGG-----T-GVASVPKASISHDHPVLCSTWKDD-GTTVFSGGCDKQ 70 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~----~~~~d~~i~i~~~~~~~-----~-~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~ 70 (194)
.|++++|+|++++|+ +|+.|+.|++||+.... . ..........+|...|.+++|+|+ +++|++++.||.
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 489999999999999 78899999999987641 0 000112344568899999999997 789999999999
Q ss_pred EEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec----------CCeEEEEecCC
Q 039044 71 VKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL----------PDRCYALTVRY 140 (194)
Q Consensus 71 i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~----------~~~~~~~~~~~ 140 (194)
|++||++++........|...|++++|+|+|++|++++.||.|++||++ ++....+.. ...+++|++++
T Consensus 174 v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~ 252 (434)
T 2oit_A 174 IAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTY 252 (434)
T ss_dssp EEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETT
T ss_pred EEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCc
Confidence 9999999887666667788999999999999999999999999999998 554443322 23467777777
Q ss_pred CEEEE-EcCCC------cEEEEECCCC
Q 039044 141 PLMVV-GTADR------NLVVFNLQNP 160 (194)
Q Consensus 141 ~~l~~-~~~dg------~v~~~d~~~~ 160 (194)
.++++ .+.+| .+++|++++.
T Consensus 253 ~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 253 VFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred eEEEEEccCCCccCCCCceEEEEeccC
Confidence 76654 33343 3899999865
No 128
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.94 E-value=4.1e-26 Score=161.87 Aligned_cols=152 Identities=20% Similarity=0.369 Sum_probs=126.5
Q ss_pred CCeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEE--ecCCCeEEEecCCCeEEEEecCC
Q 039044 1 DSVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTW--KDDGTTVFSGGCDKQVKMWPLLS 78 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~~~~~d~~i~~~d~~~ 78 (194)
++|++++|+|++++|++++.||.|++||+..... .....|..+|.+++| +|++++|++++.|+.|++||+++
T Consensus 87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~------~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 160 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQA------IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS 160 (368)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE------EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSC
T ss_pred CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCc------eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCC
Confidence 3689999999999999999999999999987642 335679999999999 88999999999999999999876
Q ss_pred CCceEEe-------------------------------------------------------------------------
Q 039044 79 GGQPVTV------------------------------------------------------------------------- 85 (194)
Q Consensus 79 ~~~~~~~------------------------------------------------------------------------- 85 (194)
++.+..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i 240 (368)
T 3mmy_A 161 SNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV 240 (368)
T ss_dssp SSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEE
T ss_pred CcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcE
Confidence 6432211
Q ss_pred -----------------ccCCC------------cEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeE
Q 039044 86 -----------------AMHDA------------PIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRC 133 (194)
Q Consensus 86 -----------------~~~~~------------~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~ 133 (194)
..|.. .|++++|+|++++|++++.||.|++||+++++.+..+.. ....
T Consensus 241 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 320 (368)
T 3mmy_A 241 AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISA 320 (368)
T ss_dssp EEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEE
T ss_pred EEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceE
Confidence 12222 599999999999999999999999999999888777654 4578
Q ss_pred EEEecCCCEEEEEcCCCcEEEEECC
Q 039044 134 YALTVRYPLMVVGTADRNLVVFNLQ 158 (194)
Q Consensus 134 ~~~~~~~~~l~~~~~dg~v~~~d~~ 158 (194)
++|+|++++|++++.|+..+.|++.
T Consensus 321 ~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 321 CCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp EEECTTSSCEEEEECCCSTTCGGGC
T ss_pred EEECCCCCeEEEEeccccccccccc
Confidence 9999999999999998865555543
No 129
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=2.9e-24 Score=149.82 Aligned_cols=157 Identities=19% Similarity=0.296 Sum_probs=130.3
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeE---EEecCCCeEEEEecCC
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV---FSGGCDKQVKMWPLLS 78 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l---~~~~~d~~i~~~d~~~ 78 (194)
.+.++.+++++++|++++.|+.|++||+.+++... ........+...+.++.+.|++..+ ++++.++.|++||.+.
T Consensus 152 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~ 230 (318)
T 4ggc_A 152 EVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW-VPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS 230 (318)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBS-CCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTT
T ss_pred ceEEEEEcCCCCEEEEEecCcceeEEECCCCcccc-cceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccc
Confidence 57889999999999999999999999998764311 2234455678899999999977643 4678899999999988
Q ss_pred CCceEEeccCCCcEEEEEecCCCCEEEEee--CCCeEEEEeCCCCCceeEEecC---CeEEEEecCCCEEEEEcCCCcEE
Q 039044 79 GGQPVTVAMHDAPIKEVAWIPEMNLLATGS--WDKTLKYWDTRQPNPVHTQQLP---DRCYALTVRYPLMVVGTADRNLV 153 (194)
Q Consensus 79 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~v~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~dg~v~ 153 (194)
....... .+...+..+.|+|++..+++++ .|+.|++||+++++++.++..+ +.+++|+|++++|++|+.||+|+
T Consensus 231 ~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~ 309 (318)
T 4ggc_A 231 GACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLR 309 (318)
T ss_dssp CCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred ccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEE
Confidence 7766554 4778899999999988877654 7999999999999998887653 46889999999999999999999
Q ss_pred EEECCCC
Q 039044 154 VFNLQNP 160 (194)
Q Consensus 154 ~~d~~~~ 160 (194)
+||+.+.
T Consensus 310 iWd~~~~ 316 (318)
T 4ggc_A 310 LWRCFEL 316 (318)
T ss_dssp EECCSCC
T ss_pred EEECCCC
Confidence 9999764
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=6.7e-24 Score=163.37 Aligned_cols=184 Identities=12% Similarity=0.085 Sum_probs=141.1
Q ss_pred CeeeEEEcCCCCEEEEeeC-CC-----eEEEEecccCCcccccccccccCCC----------------------CCeeEE
Q 039044 2 SVSSLCFSPKANILVATSW-DN-----QVRCWEISRGGTGVASVPKASISHD----------------------HPVLCS 53 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~-d~-----~i~i~~~~~~~~~~~~~~~~~~~~~----------------------~~i~~~ 53 (194)
.|.+++|+|||++|++++. |+ .|++||+.++.... ......+. ..+.++
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRL---LVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEE---EECGGGTC--------------------CCEESCCC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeE---ccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 4789999999999999998 88 89999998765311 11111111 347899
Q ss_pred EEecCCCeEEEecCCCeEEEEecCCCC--ceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecC-
Q 039044 54 TWKDDGTTVFSGGCDKQVKMWPLLSGG--QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP- 130 (194)
Q Consensus 54 ~~~~~~~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~- 130 (194)
+|+|||++|++++. +.|.+||+.++. ....+..|...+..++|+|+|++|++++ ++.|++||+.+++........
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCc
Confidence 99999999998886 999999998873 4455677888899999999999999887 569999999887654332221
Q ss_pred ------------------CeEEEEecCCCEEEEEcCCC---------------------------------cEEEEECCC
Q 039044 131 ------------------DRCYALTVRYPLMVVGTADR---------------------------------NLVVFNLQN 159 (194)
Q Consensus 131 ------------------~~~~~~~~~~~~l~~~~~dg---------------------------------~v~~~d~~~ 159 (194)
...+.|+|+|++|++++.|+ .|++||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 25689999999999987765 788999987
Q ss_pred -CCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 160 -PQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 160 -~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
++.........+...+..++| |||+.|+++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~ 304 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQR 304 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEE
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEE
Confidence 664322222246778999999 9999998765
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=3.6e-23 Score=142.54 Aligned_cols=187 Identities=12% Similarity=0.124 Sum_probs=137.1
Q ss_pred CeeeEEEcCCCCEEEEee--CCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEE-EecCCCeEEEEecCC
Q 039044 2 SVSSLCFSPKANILVATS--WDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVF-SGGCDKQVKMWPLLS 78 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~~~d~~~ 78 (194)
.|.+++|+|++++|++++ .++...+|.++.... ....+. ....+..++|+|++++|+ ++..++.+++|+++.
T Consensus 86 ~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~----~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 86 CNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGG----TPRLMT-KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp BCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCC----CCEECC-SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred cccceEECCCCCEEEEEEeCCCCcceEEEEECCCC----ceEEee-cCCCccceEECCCCCEEEEEECCCCceEEEEEEC
Confidence 467899999999999998 445666666654321 112222 233488999999999877 788899999998643
Q ss_pred -CCceEEeccCCCcEEEEEecCCCCEEEEee-CCCeEEEEeCC-CCCceeEEec---CCeEEEEecCCCEEEEEcCC---
Q 039044 79 -GGQPVTVAMHDAPIKEVAWIPEMNLLATGS-WDKTLKYWDTR-QPNPVHTQQL---PDRCYALTVRYPLMVVGTAD--- 149 (194)
Q Consensus 79 -~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~vwd~~-~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~d--- 149 (194)
+.....+..+...+.+++|+|++++++.++ .++.+++|++. .+.....+.. ....++|+|++++|++++.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 240 (297)
T 2ojh_A 161 DSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADV 240 (297)
T ss_dssp TTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTC
T ss_pred CCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCC
Confidence 334556677888999999999999888766 58899999886 3444444433 23568899999999888765
Q ss_pred --------CcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEee
Q 039044 150 --------RNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIHL 193 (194)
Q Consensus 150 --------g~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~~ 193 (194)
+.|++||+.+.+.........+...+.+++|+|+++.|+++...
T Consensus 241 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 241 FDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp CSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred CcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 56999999887643332222456778999999999999988753
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=3.3e-22 Score=144.76 Aligned_cols=175 Identities=12% Similarity=0.058 Sum_probs=135.3
Q ss_pred CeeeEEEcCCCCEEE-EeeCCCe--EEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecC-CC--eEEEEe
Q 039044 2 SVSSLCFSPKANILV-ATSWDNQ--VRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGC-DK--QVKMWP 75 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~-~~~~d~~--i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~--~i~~~d 75 (194)
.+.+++|+|+++.|+ +++.++. |++||+.++. ...+..|...+.+++|+|++++|+.++. ++ .|.+||
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~------~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ------IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC------EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC------EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 578999999999887 6666654 8899987764 2445567788999999999998888775 44 678889
Q ss_pred cCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCC---CeEEEEeCCCCCceeEEe-cCCeEEEEecCCCEEEEEcCCC-
Q 039044 76 LLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWD---KTLKYWDTRQPNPVHTQQ-LPDRCYALTVRYPLMVVGTADR- 150 (194)
Q Consensus 76 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg- 150 (194)
+.+++. ..+..+...+..++|+|+|++|++++.+ ..|.+||+.+++...... .....++|+|+++.|++++.++
T Consensus 298 ~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~l~~~s~~~~ 376 (415)
T 2hqs_A 298 INGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGM 376 (415)
T ss_dssp TTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSEEEEEEEETT
T ss_pred CCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCEEEEEEcCCC
Confidence 887664 4455677789999999999999988764 589999999877532211 2456889999999999988876
Q ss_pred --cEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCe
Q 039044 151 --NLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQG 186 (194)
Q Consensus 151 --~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~ 186 (194)
.|++||+.... .. ....+.+.|.+++|+|...+
T Consensus 377 ~~~l~~~d~~g~~--~~-~l~~~~~~v~~~~~~~~~~~ 411 (415)
T 2hqs_A 377 GSVLNLVSTDGRF--KA-RLPATDGQVKFPAWSPYLHH 411 (415)
T ss_dssp EEEEEEEETTSCC--EE-ECCCSSSEEEEEEECCCCCC
T ss_pred ccEEEEEECCCCc--EE-EeeCCCCCCcCCcccccccc
Confidence 79999997543 22 33457789999999997543
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=2e-21 Score=137.30 Aligned_cols=182 Identities=9% Similarity=0.024 Sum_probs=142.0
Q ss_pred eeeEEEcCCCCEEEEee--CCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 3 VSSLCFSPKANILVATS--WDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
+.+++|+|+++.++++. .++.|.+||..+.+. ......+...+.+++|+|+++++++++.++.|.+||+.+++
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~-----~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~ 217 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKL-----KTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK 217 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEE-----EEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCce-----EEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe
Confidence 57899999999877766 478899999987642 22233345557889999999999999999999999999988
Q ss_pred ceEEecc----CCCcEEEEEecCCCCEEEEeeC-CCeEEEEeCCCCCceeEEecC-CeEEEEecCCCEEEEEc-CCCcEE
Q 039044 81 QPVTVAM----HDAPIKEVAWIPEMNLLATGSW-DKTLKYWDTRQPNPVHTQQLP-DRCYALTVRYPLMVVGT-ADRNLV 153 (194)
Q Consensus 81 ~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~-d~~v~vwd~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~-~dg~v~ 153 (194)
....+.. +...+..++|+|+++++++++. ++.|.+||+.+++.+..+... ...++++|++++++++. .++.|.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~ 297 (353)
T 3vgz_A 218 ILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVS 297 (353)
T ss_dssp EEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCCeEE
Confidence 7776653 4556889999999997776654 589999999999887776653 35789999999766555 689999
Q ss_pred EEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 154 VFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 154 ~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+||+.+.+.. .... ....+.+++|+|+|++++++..
T Consensus 298 ~~d~~~~~~~-~~~~--~~~~~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 298 VIDAKSYKVV-KTFD--TPTHPNSLALSADGKTLYVSVK 333 (353)
T ss_dssp EEETTTTEEE-EEEE--CCSEEEEEEECTTSCEEEEEEE
T ss_pred EEECCCCeEE-EEEe--cCCCCCeEEEcCCCCEEEEEEc
Confidence 9999887643 3332 2346799999999997777654
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=5.4e-22 Score=136.63 Aligned_cols=182 Identities=10% Similarity=0.115 Sum_probs=131.1
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEeccc-CCcccccccccccCC-CCCeeEEEEecCCCeEEEec--CCCeEEEE--e
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISR-GGTGVASVPKASISH-DHPVLCSTWKDDGTTVFSGG--CDKQVKMW--P 75 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~-~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~--~d~~i~~~--d 75 (194)
.|.+++|+|++++|++++ ++.|++||+.. +.. ......+ ...+.+++|+|++++|++++ .++...+| +
T Consensus 43 ~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~-----~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~ 116 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSP-----EKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLP 116 (297)
T ss_dssp CCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSC-----EECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEE
T ss_pred ceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCc-----eEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEE
Confidence 588999999999999987 78999999987 542 2222233 46789999999999999988 33445555 4
Q ss_pred cCCCCceEEeccCCCcEEEEEecCCCCEEE-EeeCCCeEEEEeCC--CCCceeEE--ecCCeEEEEecCCCEEEEEc-CC
Q 039044 76 LLSGGQPVTVAMHDAPIKEVAWIPEMNLLA-TGSWDKTLKYWDTR--QPNPVHTQ--QLPDRCYALTVRYPLMVVGT-AD 149 (194)
Q Consensus 76 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~vwd~~--~~~~~~~~--~~~~~~~~~~~~~~~l~~~~-~d 149 (194)
..+++ ...+..+ ..+..++|+|++++|+ +++.++.+++|+++ +++..... ......++|+|+++.++.++ .+
T Consensus 117 ~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 194 (297)
T 2ojh_A 117 STGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRT 194 (297)
T ss_dssp TTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTT
T ss_pred CCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCC
Confidence 44444 3444433 3589999999999877 67789999999864 33332211 22346889999999888766 58
Q ss_pred CcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 150 RNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 150 g~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+.+++|+++........+ ..+...+.++.|+|+|++|+++..
T Consensus 195 ~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 195 GQMQIWRVRVDGSSVERI-TDSAYGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp SSCEEEEEETTSSCEEEC-CCCSEEEEEEEECTTSSEEEEEEE
T ss_pred CCccEEEECCCCCCcEEE-ecCCcccCCeEECCCCCEEEEEEc
Confidence 899999886333233333 345678899999999999988764
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.91 E-value=4.3e-23 Score=158.50 Aligned_cols=180 Identities=9% Similarity=0.079 Sum_probs=136.7
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCC---CeeEEEEecCCCeEEEecCC---------Ce
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDH---PVLCSTWKDDGTTVFSGGCD---------KQ 70 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~~~~~~~l~~~~~d---------~~ 70 (194)
+.+++|+|||+++++ +.||+|++||+.++.. ......+.. .+.+++|+|||++|++++.+ +.
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~-----~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~ 92 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTS-----TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGY 92 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCC-----EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSE
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcE-----EEEeccccccccccceEEECCCCCEEEEEecCccceeecceee
Confidence 567899999997766 7899999999988753 223333333 48999999999999998764 78
Q ss_pred EEEEecCCCCceEEec---cCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecC-----------------
Q 039044 71 VKMWPLLSGGQPVTVA---MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP----------------- 130 (194)
Q Consensus 71 i~~~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~----------------- 130 (194)
+.+||+.+++. ..+. .|...+..++|+|+|++|++++. +.|++||+.+++........
T Consensus 93 i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee 170 (723)
T 1xfd_A 93 YVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEE 170 (723)
T ss_dssp EEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHT
T ss_pred EEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEE
Confidence 88999998876 3333 34445889999999999999885 89999999987765443321
Q ss_pred ----CeEEEEecCCCEEEEEcCCC----------------------------------cEEEEECCCCCeeeEEeeCC--
Q 039044 131 ----DRCYALTVRYPLMVVGTADR----------------------------------NLVVFNLQNPQTEFKRINSP-- 170 (194)
Q Consensus 131 ----~~~~~~~~~~~~l~~~~~dg----------------------------------~v~~~d~~~~~~~~~~~~~~-- 170 (194)
...++|+|+|+.|++++.++ .|++||+.+++.. ..+..+
T Consensus 171 ~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~-~~l~~~~~ 249 (723)
T 1xfd_A 171 ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHD-LEMMPPDD 249 (723)
T ss_dssp TSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCC-EECCCCCC
T ss_pred eccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCcee-EEeeCCcc
Confidence 15799999999999887543 7999999877632 222221
Q ss_pred ---CcceeeEEEEecCCCeeEEEE
Q 039044 171 ---LKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 171 ---~~~~v~~i~~~p~~~~l~~~~ 191 (194)
+...+..++|+|||+.+++..
T Consensus 250 ~~~~~~~~~~~~~SpDg~~l~~~~ 273 (723)
T 1xfd_A 250 PRMREYYITMVKWATSTKVAVTWL 273 (723)
T ss_dssp GGGSSEEEEEEEESSSSEEEEEEE
T ss_pred CCCccceeEEEEEeCCCeEEEEEE
Confidence 256789999999999887654
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=4e-21 Score=135.15 Aligned_cols=186 Identities=11% Similarity=0.132 Sum_probs=128.5
Q ss_pred CeeeEEEcCCCCEEEEeeC-CCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEec-CCCeEEEEecCC-
Q 039044 2 SVSSLCFSPKANILVATSW-DNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGG-CDKQVKMWPLLS- 78 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~~~d~~~- 78 (194)
.+..++|+|+++.+++++. ++.|.+|++..+.. ............+.+++|+|+++++++++ .++.|.+||+.+
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 161 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP---VGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDD 161 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE---EEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc---ccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCC
Confidence 4678999999998876665 88999999952211 11112223344688999999999888777 899999999987
Q ss_pred CCceE----Eecc-CCCcEEEEEecCCCCEEEEee-CCCeEEEEeCCC--CCc--eeEEe-cC--------CeEEEEecC
Q 039044 79 GGQPV----TVAM-HDAPIKEVAWIPEMNLLATGS-WDKTLKYWDTRQ--PNP--VHTQQ-LP--------DRCYALTVR 139 (194)
Q Consensus 79 ~~~~~----~~~~-~~~~v~~~~~~~~~~~l~~~~-~d~~v~vwd~~~--~~~--~~~~~-~~--------~~~~~~~~~ 139 (194)
++... .+.. ....+..++|+|+++++++++ .++.+.+||+.. ++. ..... .+ ...++|+|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~d 241 (343)
T 1ri6_A 162 GHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPD 241 (343)
T ss_dssp SCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTT
T ss_pred CceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCC
Confidence 44322 2222 345788999999999776554 789999999954 332 22222 11 126899999
Q ss_pred CCEEEE-EcCCCcEEEEECCC--CCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 140 YPLMVV-GTADRNLVVFNLQN--PQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 140 ~~~l~~-~~~dg~v~~~d~~~--~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
++++++ +..++.|.+||+.. +........... ..+..++|+|+|++|+++.
T Consensus 242 g~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 242 GRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE-TQPRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp SSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS-SSCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC-CccceEEECCCCCEEEEec
Confidence 988774 45789999999983 322222222222 3388999999999888875
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=2e-21 Score=136.71 Aligned_cols=185 Identities=14% Similarity=0.127 Sum_probs=129.2
Q ss_pred CeeeEEEcCCCCEEEEeeCC-CeEEEEecc--cCCcccccccccccCCCCCeeEEEEecCCCeEEEec-CCCeEEEEecC
Q 039044 2 SVSSLCFSPKANILVATSWD-NQVRCWEIS--RGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGG-CDKQVKMWPLL 77 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d-~~i~i~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~~~d~~ 77 (194)
.+.+++|+|++++|++++.+ +.|.+|++. .+.. ........ ...+..++|+|+++++++++ .++.|.+||+.
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL---TFAAESAL-PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE---EEEEEEEC-SSCCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce---eecccccc-CCCCcEEEEcCCCCEEEEEecCCCeEEEEECC
Confidence 46789999999988888876 999999997 3321 11112222 23788999999999876665 48899999995
Q ss_pred C---CCceEEeccCCCcEEEEEecCCCCEEEEee-CCCeEEEEeCCC-CCcee----EEec----CCeEEEEecCCCEEE
Q 039044 78 S---GGQPVTVAMHDAPIKEVAWIPEMNLLATGS-WDKTLKYWDTRQ-PNPVH----TQQL----PDRCYALTVRYPLMV 144 (194)
Q Consensus 78 ~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~vwd~~~-~~~~~----~~~~----~~~~~~~~~~~~~l~ 144 (194)
. .+....+. ....+.+++|+|+++++++++ .++.|.+||+.+ ++... .... ....++++|++++++
T Consensus 115 ~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~ 193 (343)
T 1ri6_A 115 DGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY 193 (343)
T ss_dssp TTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred CCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEE
Confidence 3 23333444 344688999999999888877 899999999987 54332 2222 235789999999776
Q ss_pred EEc-CCCcEEEEECCC--CCee-eEEee---CC--CcceeeEEEEecCCCeeEEEE
Q 039044 145 VGT-ADRNLVVFNLQN--PQTE-FKRIN---SP--LKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 145 ~~~-~dg~v~~~d~~~--~~~~-~~~~~---~~--~~~~v~~i~~~p~~~~l~~~~ 191 (194)
+++ .++.|.+||++. ++.. ..... .. ....+..++|+|+|++|+++.
T Consensus 194 ~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~ 249 (343)
T 1ri6_A 194 CVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACD 249 (343)
T ss_dssp EEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE
T ss_pred EEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEe
Confidence 554 789999999964 2221 11111 11 123466899999999887654
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=6.1e-22 Score=152.12 Aligned_cols=183 Identities=10% Similarity=0.013 Sum_probs=135.1
Q ss_pred eeeEEEcCCCCEEEEeeCC---------CeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEE
Q 039044 3 VSSLCFSPKANILVATSWD---------NQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKM 73 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d---------~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~ 73 (194)
|.+++|+|||++|++++.+ +.+.+||+.++.. ........+...+..++|+|||++|+.++. +.|++
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~ 138 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP---QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYY 138 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC---EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEE
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce---EeccCCccccccccccEECCCCCEEEEEEC-CeEEE
Confidence 7899999999999998764 7888999987753 112222345556889999999999999875 78999
Q ss_pred EecCCCCceEEeccCCCcE------------------EEEEecCCCCEEEEeeCCC------------------------
Q 039044 74 WPLLSGGQPVTVAMHDAPI------------------KEVAWIPEMNLLATGSWDK------------------------ 111 (194)
Q Consensus 74 ~d~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~l~~~~~d~------------------------ 111 (194)
||+.+++.......+...+ .+++|+|||++|++++.++
T Consensus 139 ~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (723)
T 1xfd_A 139 CAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHY 218 (723)
T ss_dssp ESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEEC
T ss_pred EECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccC
Confidence 9999887766555443333 7899999999999887553
Q ss_pred ----------eEEEEeCCCCCceeEEecC---------CeEEEEecCCCEEEEEcC----CCcEEEEECCCCCeeeEEee
Q 039044 112 ----------TLKYWDTRQPNPVHTQQLP---------DRCYALTVRYPLMVVGTA----DRNLVVFNLQNPQTEFKRIN 168 (194)
Q Consensus 112 ----------~v~vwd~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~----dg~v~~~d~~~~~~~~~~~~ 168 (194)
.|++||+.+++....+..+ ...++|+|+|+++++... +..|++||+.+++.... ..
T Consensus 219 ~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~-~~ 297 (723)
T 1xfd_A 219 PKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK-HE 297 (723)
T ss_dssp CBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE-EE
T ss_pred CCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE-EE
Confidence 7999999988754444322 246899999998877643 35799999988764322 21
Q ss_pred CCCccee----eEEEEecCCCeeEEE
Q 039044 169 SPLKYQT----RCVAAFPDQQGFLVC 190 (194)
Q Consensus 169 ~~~~~~v----~~i~~~p~~~~l~~~ 190 (194)
..+...+ ..++|+|||+.|+..
T Consensus 298 ~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 298 DESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp EECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred eccCCEEeccCCCceEcCCCCeEEEE
Confidence 2222333 378999999988865
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=1.8e-21 Score=145.12 Aligned_cols=177 Identities=11% Similarity=0.007 Sum_probs=139.7
Q ss_pred EEcCCCCEEEEeeCCCeEEEEecccCCccccccccccc-CCCCCeeEEEEecCCCeEEEecCCCeEEEEec--CCCCceE
Q 039044 7 CFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASI-SHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPL--LSGGQPV 83 (194)
Q Consensus 7 ~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~--~~~~~~~ 83 (194)
+++|++..+++++.|++|.+||..+++. ...+. ++. +..++|+|++++|++++.|+.|++||+ .+++.+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~-----~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~ 216 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKI-----VKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA 216 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCE-----EEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceE-----EEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEE
Confidence 4788888999999999999999987753 22333 333 889999999999999999999999999 7877777
Q ss_pred EeccCCCcEEEEEecC----CCCEEEEeeC-CCeEEEEeCCCCCceeEEecC--------------CeEEEEecCCC-EE
Q 039044 84 TVAMHDAPIKEVAWIP----EMNLLATGSW-DKTLKYWDTRQPNPVHTQQLP--------------DRCYALTVRYP-LM 143 (194)
Q Consensus 84 ~~~~~~~~v~~~~~~~----~~~~l~~~~~-d~~v~vwd~~~~~~~~~~~~~--------------~~~~~~~~~~~-~l 143 (194)
++. +...+..++|+| +|+++++++. +++|.+||..+.+++..+... ...+.+++++. ++
T Consensus 217 ~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 217 EIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp EEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred EEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEE
Confidence 777 456689999999 9999998884 899999999999988776541 24678888665 56
Q ss_pred EEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 144 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 144 ~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++...++.|.+||+.+.+....... .+...+.++.|+|+|++++++..
T Consensus 296 vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~ 343 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAAN 343 (543)
T ss_dssp EEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEG
T ss_pred EEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEec
Confidence 6677899999999987654321111 24456889999999998887653
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=5.2e-21 Score=134.26 Aligned_cols=180 Identities=11% Similarity=0.022 Sum_probs=131.1
Q ss_pred eEEEcCCCCEEEEeeC-CCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCC---eEEEEecCCCC
Q 039044 5 SLCFSPKANILVATSW-DNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDK---QVKMWPLLSGG 80 (194)
Q Consensus 5 ~~~~~p~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~---~i~~~d~~~~~ 80 (194)
.++|+|+++.+++++. ++.|.+||..++.. .......+..+..+++|+|++++++++..++ .|.+||+.+++
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~ 119 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPP----KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK 119 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSC----EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCce----eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCC
Confidence 8999999997666665 88999999987642 1233334555555599999999999665553 89999999888
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEe-eCCCe-EEEEeCCCCCceeEE-----e--cCCeEEEEecCCCEEEEE-cCCC
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATG-SWDKT-LKYWDTRQPNPVHTQ-----Q--LPDRCYALTVRYPLMVVG-TADR 150 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-v~vwd~~~~~~~~~~-----~--~~~~~~~~~~~~~~l~~~-~~dg 150 (194)
.+..+.. .....+++|+|+|++++++ ..++. +.+|++.....+... . .....++++|++++++++ ..++
T Consensus 120 ~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 198 (331)
T 3u4y_A 120 FISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGN 198 (331)
T ss_dssp EEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTT
T ss_pred eEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCC
Confidence 8777654 4456899999999865555 55578 999999865443211 1 234678999999966554 4688
Q ss_pred cEEEEECCCCCee--eEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 151 NLVVFNLQNPQTE--FKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 151 ~v~~~d~~~~~~~--~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
.|++||+.+++.. ..... ....+..++|+|+|++++++.
T Consensus 199 ~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 199 SIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp EEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSSEEEEEC
T ss_pred eEEEEECCCCcccceeeecc--CCCCCceEEECCCCCEEEEEE
Confidence 9999999877641 22232 335678999999999877654
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=1.5e-20 Score=132.86 Aligned_cols=184 Identities=11% Similarity=0.031 Sum_probs=140.5
Q ss_pred CeeeEEEcCCCCEEEEeeC-------CCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEE-EecCCCeEEE
Q 039044 2 SVSSLCFSPKANILVATSW-------DNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVF-SGGCDKQVKM 73 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~-------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~~ 73 (194)
.+..++|+|+++.+++++. ++.|.+||..+.+. .... .....+..++|+|++++++ +...++.|.+
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~-----~~~~-~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEV-----TQAI-HNDLKPFGATINNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCE-----EEEE-EESSCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeE-----EEEE-ecCCCcceEEECCCCCEEEEEecCCCEEEE
Confidence 4678999999998888774 56899999987642 1111 2234477899999999554 5566799999
Q ss_pred EecCCCCceEEeccCCC---------cEEEEEecCCCCEEEEee--CCCeEEEEeCCCCCceeEEe-c--CCeEEEEecC
Q 039044 74 WPLLSGGQPVTVAMHDA---------PIKEVAWIPEMNLLATGS--WDKTLKYWDTRQPNPVHTQQ-L--PDRCYALTVR 139 (194)
Q Consensus 74 ~d~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~d~~v~vwd~~~~~~~~~~~-~--~~~~~~~~~~ 139 (194)
||..+++.+..+..+.. .+.+++|+|+++++++++ .++.|.+||.++++....+. . ....++++|+
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETT
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCC
Confidence 99999988777765432 278999999999877766 47899999999988877765 2 2467899999
Q ss_pred CCEEEEEcCCCcEEEEECCCCCeeeEEee--CCCcceeeEEEEecCCCeeEEEE
Q 039044 140 YPLMVVGTADRNLVVFNLQNPQTEFKRIN--SPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 140 ~~~l~~~~~dg~v~~~d~~~~~~~~~~~~--~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
++++++++.++.|.+||+.+.+....... ..+...+..++|+|+++.++++.
T Consensus 196 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 196 GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITD 249 (353)
T ss_dssp TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEe
Confidence 99999999999999999998764322221 12345678899999999887764
No 142
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=6.9e-20 Score=129.46 Aligned_cols=191 Identities=8% Similarity=0.049 Sum_probs=127.9
Q ss_pred CeeeEEEcCCCCEEEEee-CCCeEEEEecccCCcccccccccccC-------CCCCeeEEEEecCCCeEEEecCCCeEEE
Q 039044 2 SVSSLCFSPKANILVATS-WDNQVRCWEISRGGTGVASVPKASIS-------HDHPVLCSTWKDDGTTVFSGGCDKQVKM 73 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~d~~i~~ 73 (194)
.+..++|+|++++|++++ .++.+.+|++...............+ ....+.+++|+|+++.+++...++.|.+
T Consensus 87 ~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~ 166 (347)
T 3hfq_A 87 PPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYV 166 (347)
T ss_dssp CCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEE
Confidence 467899999999888887 68999999996432211000000111 2234889999999997777777899999
Q ss_pred EecC-CCCceE--Eecc-CCCcEEEEEecCCCCEEEE-eeCCCeEEEEeCCC--CCc--eeEEec---------CCeEEE
Q 039044 74 WPLL-SGGQPV--TVAM-HDAPIKEVAWIPEMNLLAT-GSWDKTLKYWDTRQ--PNP--VHTQQL---------PDRCYA 135 (194)
Q Consensus 74 ~d~~-~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~-~~~d~~v~vwd~~~--~~~--~~~~~~---------~~~~~~ 135 (194)
|++. +++... .+.. ....+..++|+|+|+++++ ...++.+.+|++.. ++. +..... ....++
T Consensus 167 ~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 246 (347)
T 3hfq_A 167 YNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIR 246 (347)
T ss_dssp EEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEE
T ss_pred EEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEE
Confidence 9998 443221 2222 2336788999999996665 45688999999874 332 122211 134689
Q ss_pred EecCCCEEE-EEcCCCcEEEEECCCC-CeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 136 LTVRYPLMV-VGTADRNLVVFNLQNP-QTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 136 ~~~~~~~l~-~~~~dg~v~~~d~~~~-~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
|+|++++|+ +...++.|.+|++... ..........+...+..++|+|+|++|+++..
T Consensus 247 ~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 247 LSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp ECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEET
T ss_pred ECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc
Confidence 999999875 4556899999999732 21122222223456789999999999888753
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=2e-20 Score=132.27 Aligned_cols=185 Identities=11% Similarity=0.133 Sum_probs=126.0
Q ss_pred eeeEEEcCCCCEEEEeeC---CCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEec-CCCeEEEEecCC
Q 039044 3 VSSLCFSPKANILVATSW---DNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGG-CDKQVKMWPLLS 78 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~---d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~~~d~~~ 78 (194)
+..++|+|+++ |++++. ++.|.+|++..+.. ........+...+..++|+|++++|++++ .++.|.+|++..
T Consensus 42 p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~---~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~ 117 (347)
T 3hfq_A 42 PTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTA---HKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAA 117 (347)
T ss_dssp CCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEE---EEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECT
T ss_pred cceEEEccCCe-EEEEEecCCCceEEEEEecCCcE---EEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCC
Confidence 56799999999 555544 68999999966532 11222234566788999999999888877 689999999964
Q ss_pred CCce---EEecc---------CCCcEEEEEecCCCCEEEEeeCCCeEEEEeCC-CCCcee--EEec----CCeEEEEecC
Q 039044 79 GGQP---VTVAM---------HDAPIKEVAWIPEMNLLATGSWDKTLKYWDTR-QPNPVH--TQQL----PDRCYALTVR 139 (194)
Q Consensus 79 ~~~~---~~~~~---------~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~-~~~~~~--~~~~----~~~~~~~~~~ 139 (194)
.... ..+.. +...+.+++|+|+|+++++...++.|.+||+. +++... .... ....++|+|+
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spd 197 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPD 197 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTT
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCC
Confidence 3222 22221 12348899999999966666678899999998 444322 1122 2356899999
Q ss_pred CCEEEE-EcCCCcEEEEECCC--CCeee-EEeeC-CC----cceeeEEEEecCCCeeEEEE
Q 039044 140 YPLMVV-GTADRNLVVFNLQN--PQTEF-KRINS-PL----KYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 140 ~~~l~~-~~~dg~v~~~d~~~--~~~~~-~~~~~-~~----~~~v~~i~~~p~~~~l~~~~ 191 (194)
++++++ ...++.|.+|++.. ++... ..... +. ...+..++|+|||++|+++.
T Consensus 198 g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~ 258 (347)
T 3hfq_A 198 GQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSN 258 (347)
T ss_dssp SSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEe
Confidence 997666 55688999999875 32211 11111 11 14578999999999886654
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.88 E-value=7.5e-21 Score=151.38 Aligned_cols=179 Identities=8% Similarity=0.000 Sum_probs=144.6
Q ss_pred CeeeEEEc-CCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCC-CeeEEEEecCCCeEEEecCCCeEE-EEecCC
Q 039044 2 SVSSLCFS-PKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDH-PVLCSTWKDDGTTVFSGGCDKQVK-MWPLLS 78 (194)
Q Consensus 2 ~v~~~~~~-p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~d~~i~-~~d~~~ 78 (194)
.|.+++|+ |+|+.|+.++ ++.+.+|+...+.. .....+.. .+..++|+ +++.|+.++.++.+. +|++..
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~ 368 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYV------LKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRT 368 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBE------EECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTT
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCce------EEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCC
Confidence 47899999 9999999888 78999999876532 23445666 89999999 999999988888888 999887
Q ss_pred CCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecCCCEEEEEcCCC-----
Q 039044 79 GGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTADR----- 150 (194)
Q Consensus 79 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~dg----- 150 (194)
++.. .+..|...+..++|+|+|++|++++.++.|++||+.+++....... ....++|+|++++|++++.++
T Consensus 369 ~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~ 447 (1045)
T 1k32_A 369 GKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETD 447 (1045)
T ss_dssp CCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred CCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCcccccc
Confidence 6543 4447778999999999999999999999999999998887655533 346789999999998887654
Q ss_pred -----cEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 151 -----NLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 151 -----~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
.|++||+.+++ ...+ ..+...+..++|+|||++|++++.
T Consensus 448 ~~~~~~i~l~d~~~g~--~~~l-~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 448 GYVMQAIHVYDMEGRK--IFAA-TTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp SCCEEEEEEEETTTTE--EEEC-SCSSSBEEEEEECTTSCEEEEEES
T ss_pred CCCCCeEEEEECCCCc--EEEe-eCCCcccCCceEcCCCCEEEEEec
Confidence 89999998765 2222 345667888999999999988764
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.87 E-value=6.2e-21 Score=146.29 Aligned_cols=181 Identities=9% Similarity=-0.008 Sum_probs=132.4
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCC---
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLS--- 78 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~--- 78 (194)
.|.+++|+|+ +.++.+. ++.+++||+.++.. ..+..+...+.+++|+|||++|+.+ .++.|++||+.+
T Consensus 83 ~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~------~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKV------TYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGE 153 (706)
T ss_dssp CCEEEEETTT-TEEEEEE-TTEEEEEETTTTEE------EEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTS
T ss_pred CceeEEECCC-CeEEEEE-CCEEEEEECCCCce------EEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccc
Confidence 4889999999 6666654 69999999977632 2334456678899999999999985 689999999988
Q ss_pred --CCceEEeccCCCc--------------EEEEEecCCCCEEEEee---------------------------------C
Q 039044 79 --GGQPVTVAMHDAP--------------IKEVAWIPEMNLLATGS---------------------------------W 109 (194)
Q Consensus 79 --~~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~---------------------------------~ 109 (194)
++.......+... +.+++|+|+|++|++++ .
T Consensus 154 ~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~ 233 (706)
T 2z3z_A 154 GMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSH 233 (706)
T ss_dssp CCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCC
T ss_pred cCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCC
Confidence 7665544333332 48899999999999987 3
Q ss_pred CCeEEEEeCCCCCceeEEec-----CCeEEEEecCCCEEEEEcCCC-----cEEEEECCCCCeeeEEeeCCCc---ceee
Q 039044 110 DKTLKYWDTRQPNPVHTQQL-----PDRCYALTVRYPLMVVGTADR-----NLVVFNLQNPQTEFKRINSPLK---YQTR 176 (194)
Q Consensus 110 d~~v~vwd~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~dg-----~v~~~d~~~~~~~~~~~~~~~~---~~v~ 176 (194)
+..|++||+.+++....... ....++|+|+++.|++++.++ .|++||+.+++........... ..+.
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 46899999988765433211 235789999999999987765 8999999987322222211111 2347
Q ss_pred EEEEec--CCCeeEEEE
Q 039044 177 CVAAFP--DQQGFLVCI 191 (194)
Q Consensus 177 ~i~~~p--~~~~l~~~~ 191 (194)
++.|+| ||++++++.
T Consensus 314 ~~~~sp~~dg~~l~~~~ 330 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSR 330 (706)
T ss_dssp CCEECTTCSSEEEEEEC
T ss_pred CceeecCCCCEEEEEEc
Confidence 789999 999877653
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.87 E-value=1e-20 Score=145.03 Aligned_cols=183 Identities=11% Similarity=0.121 Sum_probs=134.2
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEeccc-----CCcccccccccccCCCC--------------CeeEEEEecCCCeE
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISR-----GGTGVASVPKASISHDH--------------PVLCSTWKDDGTTV 62 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~-----~~~~~~~~~~~~~~~~~--------------~i~~~~~~~~~~~l 62 (194)
.+.+++|+|||+.|+.+ .|+.|++|++.+ +.. ......+.. .+.++.|+|||++|
T Consensus 122 ~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~-----~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~l 195 (706)
T 2z3z_A 122 ETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA-----IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCL 195 (706)
T ss_dssp CCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC-----EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEE
T ss_pred cccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc-----EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEE
Confidence 46788999999999985 589999999987 542 111111111 25889999999999
Q ss_pred EEec---------------------------------CCCeEEEEecCCCCceEEe--ccCCCcEEEEEecCCCCEEEEe
Q 039044 63 FSGG---------------------------------CDKQVKMWPLLSGGQPVTV--AMHDAPIKEVAWIPEMNLLATG 107 (194)
Q Consensus 63 ~~~~---------------------------------~d~~i~~~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~ 107 (194)
++++ .+..|.+||+.+++..... ..|...+..++|+|+|++|+++
T Consensus 196 a~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 275 (706)
T 2z3z_A 196 AFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVA 275 (706)
T ss_dssp EEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEE
T ss_pred EEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEE
Confidence 9887 4467999999887654433 2466789999999999999988
Q ss_pred eCCC-----eEEEEeCCCCCceeEEe---cC-----CeEEEEec--CCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCc
Q 039044 108 SWDK-----TLKYWDTRQPNPVHTQQ---LP-----DRCYALTV--RYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLK 172 (194)
Q Consensus 108 ~~d~-----~v~vwd~~~~~~~~~~~---~~-----~~~~~~~~--~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~ 172 (194)
+.++ .|.+||+.+++...... .. ...+.|+| ++++++++..++.+++|+++........+ ..+.
T Consensus 276 ~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l-~~~~ 354 (706)
T 2z3z_A 276 EVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQV-TKGE 354 (706)
T ss_dssp EECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEEC-CCSS
T ss_pred EeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEec-CCCC
Confidence 7775 89999999884333221 11 24579999 99999999999999999876322233333 3345
Q ss_pred ceeeE-EEEecCCCeeEEEE
Q 039044 173 YQTRC-VAAFPDQQGFLVCI 191 (194)
Q Consensus 173 ~~v~~-i~~~p~~~~l~~~~ 191 (194)
..+.. ++|+|+|+.|+++.
T Consensus 355 ~~v~~~~~~spdg~~l~~~~ 374 (706)
T 2z3z_A 355 WEVTNFAGFDPKGTRLYFES 374 (706)
T ss_dssp SCEEEEEEECTTSSEEEEEE
T ss_pred eEEEeeeEEcCCCCEEEEEe
Confidence 56666 79999999887764
No 147
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=8.8e-20 Score=127.99 Aligned_cols=180 Identities=10% Similarity=0.013 Sum_probs=128.1
Q ss_pred EEEcCCC-CEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecC-CCeEEEEecCCCCc-e
Q 039044 6 LCFSPKA-NILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGC-DKQVKMWPLLSGGQ-P 82 (194)
Q Consensus 6 ~~~~p~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~-~ 82 (194)
..|.+++ ..+++.+.++.|.+||..+++. ......+.... .++|+|+++++++++. ++.|.+||+.+++. .
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~-----~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEI-----LNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKV 76 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCE-----EEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccce-----eeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeE
Confidence 3455654 4577788899999999987753 22223344555 9999999997666655 88999999999887 6
Q ss_pred EEeccCCCcEEEEEecCCCCEEEEeeCCC---eEEEEeCCCCCceeEEecC--CeEEEEecCCCEEEEE-cCCCc-EEEE
Q 039044 83 VTVAMHDAPIKEVAWIPEMNLLATGSWDK---TLKYWDTRQPNPVHTQQLP--DRCYALTVRYPLMVVG-TADRN-LVVF 155 (194)
Q Consensus 83 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~-~~dg~-v~~~ 155 (194)
..+..+..+..+++|+|++++++++..++ .|.+||+.+++.+..+... ...++++|++++++++ ..++. +.+|
T Consensus 77 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~ 156 (331)
T 3u4y_A 77 VAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRF 156 (331)
T ss_dssp EEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEE
T ss_pred EecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEE
Confidence 66666666665599999999998655553 8999999988877766543 3688999999866555 55588 9999
Q ss_pred ECCCCCeeeEE--eeCCCcceeeEEEEecCCCeeEEEE
Q 039044 156 NLQNPQTEFKR--INSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 156 d~~~~~~~~~~--~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
++......... ........+..++|+|+|++++++.
T Consensus 157 ~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 194 (331)
T 3u4y_A 157 KIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVAN 194 (331)
T ss_dssp EECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEE
T ss_pred EECCCCcEeecCCccccCCCCccceEECCCCCEEEEEe
Confidence 99864322111 1112334578999999999776654
No 148
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=3.5e-20 Score=142.77 Aligned_cols=181 Identities=7% Similarity=0.021 Sum_probs=133.9
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCC----------------CeeEEEEecCCCeEEEe
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDH----------------PVLCSTWKDDGTTVFSG 65 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~----------------~i~~~~~~~~~~~l~~~ 65 (194)
.+.+++|+|||+.|+.++ ++.|++||+.++.. ......+.. .+..+.|+|||++|+++
T Consensus 153 ~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~-----~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~ 226 (741)
T 2ecf_A 153 FATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQ-----MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYA 226 (741)
T ss_dssp CEEEEEECTTSSEEEEEE-TTEEEEEETTTTEE-----EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEE
T ss_pred ccccccCCCCCCEEEEEe-CCcEEEEecCCCCE-----EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEE
Confidence 478899999999999988 56899999987532 111112222 24789999999999998
Q ss_pred cCCC---------------------------------eEEEEecCC-CCceEEec--cCCCcEEEEEecCCCCEEEEeeC
Q 039044 66 GCDK---------------------------------QVKMWPLLS-GGQPVTVA--MHDAPIKEVAWIPEMNLLATGSW 109 (194)
Q Consensus 66 ~~d~---------------------------------~i~~~d~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~ 109 (194)
+.|+ .|.+||+.+ ++...... .|...+..++| |+|++|++++.
T Consensus 227 ~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~ 305 (741)
T 2ecf_A 227 RIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQ 305 (741)
T ss_dssp EEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEE
T ss_pred EEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEe
Confidence 7765 788999988 77654332 47788999999 99999887654
Q ss_pred -----CCeEEEEeCCCCCceeEEecC-------CeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeE
Q 039044 110 -----DKTLKYWDTRQPNPVHTQQLP-------DRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRC 177 (194)
Q Consensus 110 -----d~~v~vwd~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~ 177 (194)
+..|.+||+.+++.......+ ...++|+|+++++++++.+|.+++|.+..... ...+ ..+...+..
T Consensus 306 ~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l-~~~~~~v~~ 383 (741)
T 2ecf_A 306 SRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAAL-THGNWSVDE 383 (741)
T ss_dssp ETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEES-CCSSSCEEE
T ss_pred cccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeee-eecceEEEe
Confidence 568999999988865544332 24789999999999999999888887653222 3333 335566777
Q ss_pred E-EEecCCCeeEEEE
Q 039044 178 V-AAFPDQQGFLVCI 191 (194)
Q Consensus 178 i-~~~p~~~~l~~~~ 191 (194)
+ .|+|+++.+++..
T Consensus 384 ~~~~s~dg~~l~~~~ 398 (741)
T 2ecf_A 384 LLAVDEKAGLAYFRA 398 (741)
T ss_dssp EEEEETTTTEEEEEE
T ss_pred EeEEeCCCCEEEEEE
Confidence 7 5999999886654
No 149
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=8.4e-20 Score=128.08 Aligned_cols=175 Identities=14% Similarity=0.088 Sum_probs=129.7
Q ss_pred eeeEEEcCCCCEE-EEeeCCCeEEEEecccCCccccccccccc-C----CCCCeeEEEEecCCCeEEEec----------
Q 039044 3 VSSLCFSPKANIL-VATSWDNQVRCWEISRGGTGVASVPKASI-S----HDHPVLCSTWKDDGTTVFSGG---------- 66 (194)
Q Consensus 3 v~~~~~~p~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~~~~~-~----~~~~i~~~~~~~~~~~l~~~~---------- 66 (194)
+..++|+|+++.+ +++..++.|.+||+.+++. ..... . +...+..++|+|++++++++.
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~-----~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 110 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKSESLVKIDLVTGET-----LGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHF 110 (337)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEETTTCCE-----EEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred ccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe-----EeeEEcCCcccccccccceEECCCCCEEEEEecccccccccc
Confidence 6789999999765 4556678999999987643 11111 1 122577899999999988886
Q ss_pred --CCCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecC--------------
Q 039044 67 --CDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP-------------- 130 (194)
Q Consensus 67 --~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~-------------- 130 (194)
.++.|.+||+.+++.+..+.. ...+..++|+|++++++++ ++.|.+||+.+++....+...
T Consensus 111 ~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~ 187 (337)
T 1pby_B 111 EVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLA 187 (337)
T ss_dssp EECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCC
T ss_pred cccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccE
Confidence 579999999988877766653 4567889999999988877 688999998876544322110
Q ss_pred -------------------------------------------------------CeEEEEecCCCEEEEEcCCCcEEEE
Q 039044 131 -------------------------------------------------------DRCYALTVRYPLMVVGTADRNLVVF 155 (194)
Q Consensus 131 -------------------------------------------------------~~~~~~~~~~~~l~~~~~dg~v~~~ 155 (194)
...++++|++++++++ ++.|++|
T Consensus 188 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~ 265 (337)
T 1pby_B 188 VWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESF 265 (337)
T ss_dssp CCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEE
T ss_pred EeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEE
Confidence 1237889999998888 7899999
Q ss_pred ECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 156 NLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 156 d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
|+.+++.. .... ....+.+++|+|+|++++++
T Consensus 266 d~~~~~~~-~~~~--~~~~~~~~~~s~dg~~l~~~ 297 (337)
T 1pby_B 266 DLEKNASI-KRVP--LPHSYYSVNVSTDGSTVWLG 297 (337)
T ss_dssp ETTTTEEE-EEEE--CSSCCCEEEECTTSCEEEEE
T ss_pred ECCCCcCc-ceec--CCCceeeEEECCCCCEEEEE
Confidence 99886532 3332 23457899999999988876
No 150
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.86 E-value=4e-20 Score=142.60 Aligned_cols=180 Identities=11% Similarity=0.004 Sum_probs=131.3
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCC-----CCeeEEEEecCCCeEEEecCC---------
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHD-----HPVLCSTWKDDGTTVFSGGCD--------- 68 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~d--------- 68 (194)
..+++|+|++++++++ |++|++||+.++.. ...+..|. .....+.|+|||++|+.++.+
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNS-----SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCE-----EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCce-----EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 4679999999988886 89999999988754 12222222 233458999999999988876
Q ss_pred CeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEe-c------------------
Q 039044 69 KQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ-L------------------ 129 (194)
Q Consensus 69 ~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~-~------------------ 129 (194)
+.+.+||+.+++.. .+..|...+...+|+|||+.|+.+. ++.|++||+.+++...... .
T Consensus 92 ~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 92 ASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp EEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred eEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence 56779999987654 4566778899999999999999885 7899999998776432111 1
Q ss_pred --CCeEEEEecCCCEEEEEcCCC------------------------------------cEEEEECCC---CCe-eeEEe
Q 039044 130 --PDRCYALTVRYPLMVVGTADR------------------------------------NLVVFNLQN---PQT-EFKRI 167 (194)
Q Consensus 130 --~~~~~~~~~~~~~l~~~~~dg------------------------------------~v~~~d~~~---~~~-~~~~~ 167 (194)
....+.|+|||+.|+..+.|. .|++||+.+ ++. ....+
T Consensus 170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l 249 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI 249 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe
Confidence 113488999999998875321 478899987 631 12223
Q ss_pred eC-----CCcceeeEEEEecCCCeeEEEE
Q 039044 168 NS-----PLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 168 ~~-----~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
.. .+...+..++|+|||+.++...
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~ 278 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQERISLQWL 278 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEE
T ss_pred cCCccCCCCCeEEEEEEEeCCCeEEEEEe
Confidence 22 2667789999999999766543
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=1e-18 Score=124.11 Aligned_cols=185 Identities=9% Similarity=0.071 Sum_probs=123.3
Q ss_pred eeEEEcCCCCEEEEee-CCCeEEEEecccCCccccccc-cc--------ccCCCCCeeEEEEecCCCeEEEec-CCCeEE
Q 039044 4 SSLCFSPKANILVATS-WDNQVRCWEISRGGTGVASVP-KA--------SISHDHPVLCSTWKDDGTTVFSGG-CDKQVK 72 (194)
Q Consensus 4 ~~~~~~p~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~-~~--------~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~ 72 (194)
..+++ +++.|++++ .++.+.+|++........... .. ...+...+.+++|+|+++++++++ .++.|.
T Consensus 103 ~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~ 180 (361)
T 3scy_A 103 CYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIH 180 (361)
T ss_dssp EEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEE
Confidence 44555 777777666 578999999975432110000 00 011233468899999999666554 588999
Q ss_pred EEecCCCCc------e-------EEeccCCCcEEEEEecCCCCEEEEee-CCCeEEEEeCCCCCc--eeEEecC------
Q 039044 73 MWPLLSGGQ------P-------VTVAMHDAPIKEVAWIPEMNLLATGS-WDKTLKYWDTRQPNP--VHTQQLP------ 130 (194)
Q Consensus 73 ~~d~~~~~~------~-------~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~vwd~~~~~~--~~~~~~~------ 130 (194)
+|++..... + .....+...+..++|+|+|+++++++ .++.|.+||+.+++. +......
T Consensus 181 v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~ 260 (361)
T 3scy_A 181 KFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQG 260 (361)
T ss_dssp EEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCC
T ss_pred EEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCC
Confidence 999875442 1 11223456688999999999887777 689999999986643 2222221
Q ss_pred CeEEEEecCCCEEEEEcCC--CcEEEEECC--CCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 131 DRCYALTVRYPLMVVGTAD--RNLVVFNLQ--NPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 131 ~~~~~~~~~~~~l~~~~~d--g~v~~~d~~--~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
...++|+|++++|+++..+ +.|.+|++. +++......... ...++.++|+|+|++|+++.
T Consensus 261 ~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 261 SGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp EEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEE
T ss_pred cccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEE
Confidence 2488999999998776654 889999996 333222222122 45678999999999988875
No 152
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.86 E-value=4e-19 Score=132.51 Aligned_cols=180 Identities=7% Similarity=-0.006 Sum_probs=131.5
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEec--ccCCcccccccccccCCCCCeeEEEEec----CCCeEEEecC-CCeEEEEe
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEI--SRGGTGVASVPKASISHDHPVLCSTWKD----DGTTVFSGGC-DKQVKMWP 75 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~l~~~~~-d~~i~~~d 75 (194)
+..++|+|++++|++++.|++|++||+ .+.. ....+. +......++|+| +++++++++. ++.|.+||
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~-----~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D 254 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPT-----KVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMD 254 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCE-----EEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCc-----EEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEe
Confidence 678999999999999999999999999 4442 122222 455679999999 9999998885 89999999
Q ss_pred cCCCCceEEecc----------CC-CcEEEEEecCCCCE-EEEeeCCCeEEEEeCCCCCcee--EEec--CCeEEEEecC
Q 039044 76 LLSGGQPVTVAM----------HD-APIKEVAWIPEMNL-LATGSWDKTLKYWDTRQPNPVH--TQQL--PDRCYALTVR 139 (194)
Q Consensus 76 ~~~~~~~~~~~~----------~~-~~v~~~~~~~~~~~-l~~~~~d~~v~vwd~~~~~~~~--~~~~--~~~~~~~~~~ 139 (194)
..+++.+..+.. |. ..+..+.++|++.. +++...++.|.+||+.+.+.+. .+.. ....+.|+|+
T Consensus 255 ~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spd 334 (543)
T 1nir_A 255 GETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSS 334 (543)
T ss_dssp TTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTT
T ss_pred ccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCC
Confidence 999988877654 22 37889999997654 5666778999999998876544 3332 3457899999
Q ss_pred CCEEEEEc-CCCcEEEEECCCCCeeeEEeeC---CCcceeeEEEEecC-CCeeEEE
Q 039044 140 YPLMVVGT-ADRNLVVFNLQNPQTEFKRINS---PLKYQTRCVAAFPD-QQGFLVC 190 (194)
Q Consensus 140 ~~~l~~~~-~dg~v~~~d~~~~~~~~~~~~~---~~~~~v~~i~~~p~-~~~l~~~ 190 (194)
++++++++ .+++|.+||+.+++.. ..+.. +|.+....+ ++|+ +..++++
T Consensus 335 g~~l~va~~~~~~v~v~D~~tg~l~-~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~ 388 (543)
T 1nir_A 335 HRYFMTAANNSNKVAVIDSKDRRLS-ALVDVGKTPHPGRGANF-VHPKYGPVWSTS 388 (543)
T ss_dssp SCEEEEEEGGGTEEEEEETTTTEEE-EEEECSSSBCCTTCEEE-EETTTEEEEEEE
T ss_pred CCEEEEEecCCCeEEEEECCCCeEE-EeeccCCCCCCCCCccc-CCCCCccEEEec
Confidence 99876654 5889999999987643 33322 243322232 4787 4444443
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=5.6e-20 Score=138.26 Aligned_cols=178 Identities=11% Similarity=0.072 Sum_probs=128.0
Q ss_pred CeeeEEEcCCCCEEEEeeC-CCeEEEEecccCCcccccccccccCCC-CCeeEEEEecCCCeEEEecC---CCeEEEEec
Q 039044 2 SVSSLCFSPKANILVATSW-DNQVRCWEISRGGTGVASVPKASISHD-HPVLCSTWKDDGTTVFSGGC---DKQVKMWPL 76 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~---d~~i~~~d~ 76 (194)
+|++++|+|||+.||.++. ||+++||++..+. ...+..+. ..+..+.|+|| +.+++++. +...++|.+
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~------~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE------TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTE------EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEE
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcCCC------cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEE
Confidence 6899999999999998887 9999999986543 23333444 68999999999 77777664 455666655
Q ss_pred CC--CCceEEeccCCCcEEEEEecCCCCE-EEEeeCCCeEEEEeCCCCCceeEEecCCeEEEEecCCCEEEEEcCC----
Q 039044 77 LS--GGQPVTVAMHDAPIKEVAWIPEMNL-LATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTAD---- 149 (194)
Q Consensus 77 ~~--~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d---- 149 (194)
.. ......+... ..+...+|+|+++. +++.+.++.+.+||+.+++.......+...++++|+|+++++++.+
T Consensus 96 ~~~~~g~~~~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~~~~~ 174 (582)
T 3o4h_A 96 NTSRPGEEQRLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFFGGGR 174 (582)
T ss_dssp ETTSTTCCEECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEEETTE
T ss_pred eccCCCccccccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEcCCCC
Confidence 43 2222244322 23446688888753 3334445555699998887655555555789999999999988776
Q ss_pred CcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 150 RNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 150 g~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
+.|++||+.+++.. .+ ..+...+..++|+|||+.|+++
T Consensus 175 ~~i~~~d~~~g~~~--~l-~~~~~~~~~~~~SpDG~~l~~~ 212 (582)
T 3o4h_A 175 VSLFTSNLSSGGLR--VF-DSGEGSFSSASISPGMKVTAGL 212 (582)
T ss_dssp EEEEEEETTTCCCE--EE-CCSSCEEEEEEECTTSCEEEEE
T ss_pred eEEEEEcCCCCCce--Ee-ecCCCccccceECCCCCEEEEc
Confidence 77999999887642 33 3466778999999999999854
No 154
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=1e-20 Score=145.43 Aligned_cols=176 Identities=12% Similarity=0.093 Sum_probs=128.8
Q ss_pred eEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCC---CCeeEEEEecCCCeEEEecC---------CCeEE
Q 039044 5 SLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHD---HPVLCSTWKDDGTTVFSGGC---------DKQVK 72 (194)
Q Consensus 5 ~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~~~~~---------d~~i~ 72 (194)
+++|+|+++++++ +.|++|++||+.++.. ......+. ..+.+++|+|||++|+.++. ++.|+
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~-----~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQS-----YTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCE-----EEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcE-----EEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence 6799999965555 4699999999988753 12222222 24889999999999998876 78999
Q ss_pred EEecCCCCce--EEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec---------------------
Q 039044 73 MWPLLSGGQP--VTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL--------------------- 129 (194)
Q Consensus 73 ~~d~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~--------------------- 129 (194)
+||+.+++.+ ..+ ...+..++|+|||++|+++. ++.|++||+.+++.......
T Consensus 94 ~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~ 169 (719)
T 1z68_A 94 IYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLA 169 (719)
T ss_dssp EEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTC
T ss_pred EEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeeccc
Confidence 9999887652 222 35688999999999999886 78999999988765432111
Q ss_pred CCeEEEEecCCCEEEEEcCCC----------------------------------cEEEEECCCCCee-eEEee-----C
Q 039044 130 PDRCYALTVRYPLMVVGTADR----------------------------------NLVVFNLQNPQTE-FKRIN-----S 169 (194)
Q Consensus 130 ~~~~~~~~~~~~~l~~~~~dg----------------------------------~v~~~d~~~~~~~-~~~~~-----~ 169 (194)
....++|+|+|++|++++.|. .|++||+.+++.. ...+. .
T Consensus 170 ~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 249 (719)
T 1z68_A 170 TKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIA 249 (719)
T ss_dssp SSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHH
T ss_pred CcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCC
Confidence 114799999999999987652 7889999876531 01111 1
Q ss_pred CCcceeeEEEEecCCCeeEEE
Q 039044 170 PLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 170 ~~~~~v~~i~~~p~~~~l~~~ 190 (194)
.+...+..++|+||++.+++.
T Consensus 250 ~~~~~~~~~~~SpD~~~~~~~ 270 (719)
T 1z68_A 250 SSDYYFSWLTWVTDERVCLQW 270 (719)
T ss_dssp TSCEEEEEEEESSSSEEEEEE
T ss_pred CCcceEEEeEEeCCCeEEEEE
Confidence 366778999999998766653
No 155
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=6.8e-19 Score=125.38 Aligned_cols=186 Identities=6% Similarity=0.011 Sum_probs=128.0
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecc-cCCcccccccccccCCCCCeeEEEEecCCCe--EEEec------------
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEIS-RGGTGVASVPKASISHDHPVLCSTWKDDGTT--VFSGG------------ 66 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--l~~~~------------ 66 (194)
.+..++|+|++++|++++.+ .|.+|++. ++.. ........+ +....++|+|++++ ++++.
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~---~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEI---VHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEE---EEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCE---EEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 46789999999999999888 99999997 4421 101111111 23556899999994 55553
Q ss_pred -CCCeEEEEecCC-CCceEEec----cCCCcEEEEEecCCCCEEEEeeC-CCeEEEEeCC-CCCce--eEEec-----CC
Q 039044 67 -CDKQVKMWPLLS-GGQPVTVA----MHDAPIKEVAWIPEMNLLATGSW-DKTLKYWDTR-QPNPV--HTQQL-----PD 131 (194)
Q Consensus 67 -~d~~i~~~d~~~-~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~-d~~v~vwd~~-~~~~~--~~~~~-----~~ 131 (194)
.++.+.+|++.. ++....+. .+...+.+++|+|+|++++++.. ++.|++||+. +++.. ..... ..
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCE
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCC
Confidence 689999999974 55433332 24567999999999998887654 6799999998 66643 23321 24
Q ss_pred eEEEEecCCCEEEEEcC-CCcEEEEECC--CCCeee--EEee---CC---Ccc------eeeEEE-EecCCCeeEEEEe
Q 039044 132 RCYALTVRYPLMVVGTA-DRNLVVFNLQ--NPQTEF--KRIN---SP---LKY------QTRCVA-AFPDQQGFLVCIH 192 (194)
Q Consensus 132 ~~~~~~~~~~~l~~~~~-dg~v~~~d~~--~~~~~~--~~~~---~~---~~~------~v~~i~-~~p~~~~l~~~~~ 192 (194)
..++|+|++++++++++ ++.|.+|++. +++... .... .. +.. .+..++ |+|||++|+++..
T Consensus 196 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred CEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC
Confidence 67899999999888775 6889999875 343211 1111 11 111 578999 9999999887654
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=1.4e-18 Score=123.37 Aligned_cols=177 Identities=12% Similarity=0.136 Sum_probs=120.0
Q ss_pred eeeEEEcCCCCEEEEee-CCCeEEEEecccCCc----c-cccc---cccccCCCCCeeEEEEecCCCeEEEec-CCCeEE
Q 039044 3 VSSLCFSPKANILVATS-WDNQVRCWEISRGGT----G-VASV---PKASISHDHPVLCSTWKDDGTTVFSGG-CDKQVK 72 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~-~d~~i~i~~~~~~~~----~-~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~ 72 (194)
+.+++|+|+++++++++ .++.|.+|++..... . .... .............++|+|+++++++++ .++.|.
T Consensus 157 ~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 236 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVI 236 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEE
T ss_pred ceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEE
Confidence 46799999999666555 478999999876431 0 0000 112223455678999999999887766 689999
Q ss_pred EEecCCCCc--eEEe---ccCCCcEEEEEecCCCCEEEEeeCC--CeEEEEeCC--CCC--ceeEEec--CCeEEEEecC
Q 039044 73 MWPLLSGGQ--PVTV---AMHDAPIKEVAWIPEMNLLATGSWD--KTLKYWDTR--QPN--PVHTQQL--PDRCYALTVR 139 (194)
Q Consensus 73 ~~d~~~~~~--~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d--~~v~vwd~~--~~~--~~~~~~~--~~~~~~~~~~ 139 (194)
+|++.+++. +..+ ..+......++|+|+|++|+++..+ +.|.+|++. +++ .+..... ....++|+|+
T Consensus 237 v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spd 316 (361)
T 3scy_A 237 AFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPN 316 (361)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTT
T ss_pred EEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCC
Confidence 999986643 2222 2233457899999999998776654 899999986 344 2333332 4568999999
Q ss_pred CCEEEEEc-CCCcEEEEECC--CCCeeeEEee-CCCcceeeEEEEe
Q 039044 140 YPLMVVGT-ADRNLVVFNLQ--NPQTEFKRIN-SPLKYQTRCVAAF 181 (194)
Q Consensus 140 ~~~l~~~~-~dg~v~~~d~~--~~~~~~~~~~-~~~~~~v~~i~~~ 181 (194)
+++|++++ .++.|.+|++. +++. .... ..+...+.|+.|.
T Consensus 317 g~~l~~~~~~~~~v~v~~~d~~~g~~--~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 317 GKYLLVACRDTNVIQIFERDQATGLL--TDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp SCEEEEEETTTTEEEEEEECTTTCCE--EECSCCEECSSEEEEEEE
T ss_pred CCEEEEEECCCCCEEEEEEECCCCcE--eecceeeeCCCCeEEEEc
Confidence 99888887 57889996554 4442 2221 1123457888886
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.85 E-value=7.1e-19 Score=123.99 Aligned_cols=175 Identities=10% Similarity=0.031 Sum_probs=125.8
Q ss_pred CeeeEEEcCCCCEEE-EeeCCCeEEEEecccCCccccccccccc-CC-----CCCeeEEEEecCCCeEEEecCC------
Q 039044 2 SVSSLCFSPKANILV-ATSWDNQVRCWEISRGGTGVASVPKASI-SH-----DHPVLCSTWKDDGTTVFSGGCD------ 68 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~-~~-----~~~i~~~~~~~~~~~l~~~~~d------ 68 (194)
.+..++|+|+++.++ +...++.|.+||+.+++. ..... .+ ...+..++|+|+++++++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~-----~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 118 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN-----TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLND 118 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE-----EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSS
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE-----EEEEEcccccccccccccceEECCCCCEEEEEccccccccc
Confidence 467899999998655 555689999999987642 11111 11 2337889999999999998865
Q ss_pred ------CeEEEEecCCCCc---eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecC---------
Q 039044 69 ------KQVKMWPLLSGGQ---PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP--------- 130 (194)
Q Consensus 69 ------~~i~~~d~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~--------- 130 (194)
+.|.+||+.+++. +..+. +...+.+++|+|+++ +++++ +.|.+||+.+++....+...
T Consensus 119 ~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 194 (349)
T 1jmx_B 119 HYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSA 194 (349)
T ss_dssp CEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCC
T ss_pred ccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccC
Confidence 8999999987543 33333 445688999999999 55554 34999999888766544322
Q ss_pred --------------------------------------------------------------CeEEEEec-CCCEEEEEc
Q 039044 131 --------------------------------------------------------------DRCYALTV-RYPLMVVGT 147 (194)
Q Consensus 131 --------------------------------------------------------------~~~~~~~~-~~~~l~~~~ 147 (194)
...++++| ++++++++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~- 273 (349)
T 1jmx_B 195 PDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV- 273 (349)
T ss_dssp CBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-
T ss_pred ccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-
Confidence 12345668 99998888
Q ss_pred CCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 148 ADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 148 ~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
++.|++||+.+++. ...... ...+.+++|+|+|++|+++
T Consensus 274 -~~~v~~~d~~~~~~-~~~~~~--~~~~~~~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 274 -LNRLAKYDLKQRKL-IKAANL--DHTYYCVAFDKKGDKLYLG 312 (349)
T ss_dssp -ESEEEEEETTTTEE-EEEEEC--SSCCCEEEECSSSSCEEEE
T ss_pred -cCeEEEEECccCeE-EEEEcC--CCCccceEECCCCCEEEEe
Confidence 88999999998753 233322 3457899999999988875
No 158
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=4.4e-19 Score=141.31 Aligned_cols=179 Identities=10% Similarity=0.007 Sum_probs=136.6
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCC----------eE
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDK----------QV 71 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~----------~i 71 (194)
.+..++|+|+++.|++++.++.|++||+.++.. ......|...+.+++|+|||++|++++.++ .|
T Consensus 380 ~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~-----~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i 454 (1045)
T 1k32_A 380 NVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP-----TVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI 454 (1045)
T ss_dssp SEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-----EEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred ceeeeEECCCCCEEEEECCCCeEEEEECCCCce-----EEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeE
Confidence 478899999999999999999999999987642 233346888899999999999998887654 89
Q ss_pred EEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc----------------------------
Q 039044 72 KMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP---------------------------- 123 (194)
Q Consensus 72 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~---------------------------- 123 (194)
++||+.+++ ...+..|...+..++|+|+|++|++.+.++...+|+......
T Consensus 455 ~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (1045)
T 1k32_A 455 HVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSM 533 (1045)
T ss_dssp EEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGG
T ss_pred EEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCcc
Confidence 999998876 667778888899999999999999999877777776432211
Q ss_pred ---------------eeEEe---cCCeEEEEecCCCEEEE-------------EcCCCcEEEEECCCCCeeeEEeeCCCc
Q 039044 124 ---------------VHTQQ---LPDRCYALTVRYPLMVV-------------GTADRNLVVFNLQNPQTEFKRINSPLK 172 (194)
Q Consensus 124 ---------------~~~~~---~~~~~~~~~~~~~~l~~-------------~~~dg~v~~~d~~~~~~~~~~~~~~~~ 172 (194)
+..+. .....++++|+++.+++ ......+.+||+.+++.. .+.
T Consensus 534 ~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~--~l~---- 607 (1045)
T 1k32_A 534 TSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT--EVK---- 607 (1045)
T ss_dssp SCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE--EEE----
T ss_pred ccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEE--Eee----
Confidence 01111 12246788999987775 122456889999887642 222
Q ss_pred ceeeEEEEecCCCeeEEEEe
Q 039044 173 YQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 173 ~~v~~i~~~p~~~~l~~~~~ 192 (194)
..+.+++|+|||+.|+++..
T Consensus 608 ~~v~~~~~S~DG~~l~~~~~ 627 (1045)
T 1k32_A 608 NNLTDLRLSADRKTVMVRKD 627 (1045)
T ss_dssp EEEEEEEECTTSCEEEEEET
T ss_pred cCcceEEECCCCCEEEEEcC
Confidence 55789999999999998764
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=6.1e-19 Score=132.65 Aligned_cols=171 Identities=15% Similarity=0.110 Sum_probs=127.5
Q ss_pred eeeEEEcCCCC--EEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCC----CeEEEEec
Q 039044 3 VSSLCFSPKAN--ILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCD----KQVKMWPL 76 (194)
Q Consensus 3 v~~~~~~p~~~--~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~~~d~ 76 (194)
+...+|+|+++ .++++. ++.+.+||+.++.. ..+..+.. .+++|+|||++|++++.+ +.|++||+
T Consensus 112 ~~~~~~s~dg~~~~~~s~~-~~~~~l~d~~~g~~------~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~ 182 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGAT-EDRVALYALDGGGL------RELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNL 182 (582)
T ss_dssp BEEEEEEECSSCEEEEEEC-SSCEEEEEEETTEE------EEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEET
T ss_pred ceeeeeCCCCCeEEEEecC-CCCceEEEccCCcE------EEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcC
Confidence 34568888875 344444 44556999987642 11222222 789999999999988777 78999999
Q ss_pred CCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCC--eEEEEeCCCCCceeEEecCC---eEEE--------EecCCCEE
Q 039044 77 LSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDK--TLKYWDTRQPNPVHTQQLPD---RCYA--------LTVRYPLM 143 (194)
Q Consensus 77 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~vwd~~~~~~~~~~~~~~---~~~~--------~~~~~~~l 143 (194)
.+++.. .+..|...+..++|+|||++|+++..++ .|++||+.+++.. ...... ..+. |+|+|..+
T Consensus 183 ~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 260 (582)
T 3o4h_A 183 SSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLA 260 (582)
T ss_dssp TTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEE
T ss_pred CCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEE
Confidence 887654 6677888999999999999999888888 8999999988766 333221 2344 99999889
Q ss_pred EEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 144 VVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 144 ~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++++.++.+++|++ ++. .. .....+.+++|+ +++.+++++.
T Consensus 261 ~~~~~~g~~~l~~~--g~~-~~----~~~~~v~~~~~s-dg~~l~~~s~ 301 (582)
T 3o4h_A 261 VVARREGRSAVFID--GER-VE----APQGNHGRVVLW-RGKLVTSHTS 301 (582)
T ss_dssp EEEEETTEEEEEET--TEE-EC----CCSSEEEEEEEE-TTEEEEEEEE
T ss_pred EEEEcCCcEEEEEE--CCe-ec----cCCCceEEEEec-CCEEEEEEcC
Confidence 99999999999999 332 11 234678899999 9988877653
No 160
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.83 E-value=1.7e-18 Score=123.30 Aligned_cols=190 Identities=14% Similarity=0.065 Sum_probs=126.3
Q ss_pred eeeEEEcCCCCE--EEEee-------------CCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecC
Q 039044 3 VSSLCFSPKANI--LVATS-------------WDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGC 67 (194)
Q Consensus 3 v~~~~~~p~~~~--l~~~~-------------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 67 (194)
+..++|+|+++. ++++. .++.+.+|++................+...+.+++|+|+|++++++..
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 164 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL 164 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC
Confidence 345789999984 55553 689999999974321100000000124567899999999998887654
Q ss_pred -CCeEEEEecC-CCCce--EEec--cCCCcEEEEEecCCCCEEEEeeC-CCeEEEEeCC--CCCcee---EEe-c-----
Q 039044 68 -DKQVKMWPLL-SGGQP--VTVA--MHDAPIKEVAWIPEMNLLATGSW-DKTLKYWDTR--QPNPVH---TQQ-L----- 129 (194)
Q Consensus 68 -d~~i~~~d~~-~~~~~--~~~~--~~~~~v~~~~~~~~~~~l~~~~~-d~~v~vwd~~--~~~~~~---~~~-~----- 129 (194)
++.|++|++. +++.. ..+. .|...+..++|+|+|+++++++. ++.|.+|++. +++... ... .
T Consensus 165 ~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 244 (365)
T 1jof_A 165 TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIP 244 (365)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCC
T ss_pred CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcC
Confidence 6799999998 66543 2233 24567899999999999887764 6899999765 454321 121 1
Q ss_pred ----------CCeEEE-EecCCCEEEEEcCCC------cEEEEECC-CCCeeeEE-eeCCCcceeeEEEEec---CCCee
Q 039044 130 ----------PDRCYA-LTVRYPLMVVGTADR------NLVVFNLQ-NPQTEFKR-INSPLKYQTRCVAAFP---DQQGF 187 (194)
Q Consensus 130 ----------~~~~~~-~~~~~~~l~~~~~dg------~v~~~d~~-~~~~~~~~-~~~~~~~~v~~i~~~p---~~~~l 187 (194)
....++ ++|++++|+++..+. .|.+|++. +++..... ....+...+..++|+| +|++|
T Consensus 245 g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l 324 (365)
T 1jof_A 245 DRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWM 324 (365)
T ss_dssp CBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEE
T ss_pred CcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEE
Confidence 134678 999999988776432 79999996 44322111 1122334567899999 89999
Q ss_pred EEEEe
Q 039044 188 LVCIH 192 (194)
Q Consensus 188 ~~~~~ 192 (194)
+++..
T Consensus 325 ~v~~~ 329 (365)
T 1jof_A 325 AITDD 329 (365)
T ss_dssp EEECS
T ss_pred EEEEc
Confidence 88754
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.83 E-value=9.1e-20 Score=140.13 Aligned_cols=179 Identities=12% Similarity=0.068 Sum_probs=125.3
Q ss_pred eeeEEEcCCCCEEEEeeC---------CCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEE
Q 039044 3 VSSLCFSPKANILVATSW---------DNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKM 73 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~---------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~ 73 (194)
|.+++|+|||++|+.++. ++.|++||+.++... ....+ ...+..++|+|||+.|+.+. ++.|++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~---~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~ 134 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFV---RGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYL 134 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC---CSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEE
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccc---cceec---CcccccceECCCCCEEEEEE-CCeEEE
Confidence 789999999999998876 689999999876420 00111 24688899999999999885 789999
Q ss_pred EecCCCCceEEe-ccCCCcE-----------------EEEEecCCCCEEEEeeCCC------------------------
Q 039044 74 WPLLSGGQPVTV-AMHDAPI-----------------KEVAWIPEMNLLATGSWDK------------------------ 111 (194)
Q Consensus 74 ~d~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~l~~~~~d~------------------------ 111 (194)
|++.+++..... .++...+ .+++|+|||++|++++.|.
T Consensus 135 ~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~y 214 (719)
T 1z68_A 135 KQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPY 214 (719)
T ss_dssp ESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEEC
T ss_pred EeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecC
Confidence 999887765422 2222222 4899999999999987652
Q ss_pred ----------eEEEEeCCCCCce--eEE---------ecCCeEEEEecCCCEEEEEcCC----CcEEEEE----CCCCCe
Q 039044 112 ----------TLKYWDTRQPNPV--HTQ---------QLPDRCYALTVRYPLMVVGTAD----RNLVVFN----LQNPQT 162 (194)
Q Consensus 112 ----------~v~vwd~~~~~~~--~~~---------~~~~~~~~~~~~~~~l~~~~~d----g~v~~~d----~~~~~~ 162 (194)
.|++||+.+++.. ..+ ......++|+|+++.+++.... ..|.+|| +.+++.
T Consensus 215 p~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~ 294 (719)
T 1z68_A 215 PKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC 294 (719)
T ss_dssp CBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC
T ss_pred CCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce
Confidence 7889999877642 111 1123578999998777664432 2488899 765442
Q ss_pred eeEEee---CCCcceee-----EEEEecCCCeeEE
Q 039044 163 EFKRIN---SPLKYQTR-----CVAAFPDQQGFLV 189 (194)
Q Consensus 163 ~~~~~~---~~~~~~v~-----~i~~~p~~~~l~~ 189 (194)
. .... ..+...+. .+.|+|||+.++.
T Consensus 295 ~-~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 295 P-KTQEHIEESRTGWAGGFFVSTPVFSYDAISYYK 328 (719)
T ss_dssp C-GGGEEEEECSSSCSSSSSCCCCEECTTSSCEEE
T ss_pred E-EEEecccccCCceEccccCCccEECCCCCeEEE
Confidence 1 1111 23455565 8899999997765
No 162
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.82 E-value=6.3e-18 Score=118.53 Aligned_cols=151 Identities=13% Similarity=0.155 Sum_probs=117.2
Q ss_pred CeeeEEEcCCCCEEEEee------------CCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCC
Q 039044 2 SVSSLCFSPKANILVATS------------WDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDK 69 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~------------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~ 69 (194)
.+.+++|+|+++.++++. .++.|.+||+.+... .... .....+.+++|+|++++++++ ++
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~-----~~~~-~~~~~~~~~~~s~dg~~l~~~--~~ 154 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR-----RKAF-EAPRQITMLAWARDGSKLYGL--GR 154 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE-----EEEE-ECCSSCCCEEECTTSSCEEEE--SS
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE-----EEEE-eCCCCcceeEECCCCCEEEEe--CC
Confidence 466899999999998886 579999999976532 1222 224557889999999988888 67
Q ss_pred eEEEEecCCCCceEEecc--------------------------------------------------------------
Q 039044 70 QVKMWPLLSGGQPVTVAM-------------------------------------------------------------- 87 (194)
Q Consensus 70 ~i~~~d~~~~~~~~~~~~-------------------------------------------------------------- 87 (194)
.|.+||+.+++....+..
T Consensus 155 ~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 234 (337)
T 1pby_B 155 DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred eEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence 899999887655433321
Q ss_pred ----CCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec--CCeEEEEecCCCEEEEEcCCCcEEEEECCCCC
Q 039044 88 ----HDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL--PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQ 161 (194)
Q Consensus 88 ----~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~ 161 (194)
+...+.+++|+|++++++++ ++.|.+||+.+++.+..+.. ....++++|+++++++++.++.|++||+.+.+
T Consensus 235 ~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 235 EVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred ecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 11234568999999998888 79999999998887766654 34688999999999999999999999999876
Q ss_pred e
Q 039044 162 T 162 (194)
Q Consensus 162 ~ 162 (194)
.
T Consensus 313 ~ 313 (337)
T 1pby_B 313 K 313 (337)
T ss_dssp E
T ss_pred E
Confidence 4
No 163
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.82 E-value=5.4e-18 Score=119.46 Aligned_cols=152 Identities=18% Similarity=0.237 Sum_probs=115.7
Q ss_pred eeeEEEcCCCCEEEEeeCC------------CeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCe
Q 039044 3 VSSLCFSPKANILVATSWD------------NQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQ 70 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d------------~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~ 70 (194)
+..++|+|+++++++++.+ +.|.+||+.++.. ........+...+.+++|+|+++ +++++. .
T Consensus 94 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~ 167 (349)
T 1jmx_B 94 MYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE---AKPVRTFPMPRQVYLMRAADDGS-LYVAGP--D 167 (349)
T ss_dssp SSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG---BCCSEEEECCSSCCCEEECTTSC-EEEESS--S
T ss_pred ccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc---cceeeeccCCCcccceeECCCCc-EEEccC--c
Confidence 6789999999999998865 8999999987432 11111223344688999999999 666544 3
Q ss_pred EEEEecCCCCceEEeccCC-------------------------------------------------------------
Q 039044 71 VKMWPLLSGGQPVTVAMHD------------------------------------------------------------- 89 (194)
Q Consensus 71 i~~~d~~~~~~~~~~~~~~------------------------------------------------------------- 89 (194)
|.+||+.+++.+..+..+.
T Consensus 168 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (349)
T 1jmx_B 168 IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHT 247 (349)
T ss_dssp EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEE
T ss_pred EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEe
Confidence 9999998887665543221
Q ss_pred -------CcEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCCceeEEec--CCeEEEEecCCCEEEEEcCCCcEEEEECCC
Q 039044 90 -------APIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVHTQQL--PDRCYALTVRYPLMVVGTADRNLVVFNLQN 159 (194)
Q Consensus 90 -------~~v~~~~~~~-~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~ 159 (194)
..+..++|+| ++++++++ ++.|.+||+.+++.+..+.. ....++++|++++|++++.++.|.+||+++
T Consensus 248 ~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 248 QEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp EEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred cccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 1345677889 99998888 88999999999887766654 346889999999888888899999999988
Q ss_pred CCe
Q 039044 160 PQT 162 (194)
Q Consensus 160 ~~~ 162 (194)
.+.
T Consensus 326 ~~~ 328 (349)
T 1jmx_B 326 LEK 328 (349)
T ss_dssp TEE
T ss_pred cce
Confidence 764
No 164
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.81 E-value=7.6e-18 Score=119.78 Aligned_cols=178 Identities=17% Similarity=0.118 Sum_probs=136.3
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCccc-----ccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEec
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGV-----ASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPL 76 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~ 76 (194)
+++.+++++...++++|+.++ +.+|++....... ...+.....+.. |+.++| +++.|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 478899999999999999885 6679876432000 011112234556 999999 88999999 8899999999
Q ss_pred CCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecCCeEEEEecCCCEEEEEcCCCcEEEEE
Q 039044 77 LSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFN 156 (194)
Q Consensus 77 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~d 156 (194)
++.........|...+.++.+.+. .+++++.||.|.+||+.++.... .....++++|+|+| ++.|..||++++|+
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~ 188 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-LAQNVTSFDVTNSQ--LAVLLKDRSFQSFA 188 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-EEESEEEEEECSSE--EEEEETTSCEEEEE
T ss_pred hhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-ccCCceEEEEcCCc--eEEEEcCCcEEEEc
Confidence 887766667778888988887665 38888999999999999777643 55677899999999 78899999999998
Q ss_pred CCCCCee-eEEe------eC--CCcceeeEEEEecCCCeeEE
Q 039044 157 LQNPQTE-FKRI------NS--PLKYQTRCVAAFPDQQGFLV 189 (194)
Q Consensus 157 ~~~~~~~-~~~~------~~--~~~~~v~~i~~~p~~~~l~~ 189 (194)
....+.. ...+ .. ++...|.+|.|.+++.++++
T Consensus 189 ~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 189 WRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 8776521 2223 11 35688999999999988875
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.81 E-value=1.6e-17 Score=118.83 Aligned_cols=179 Identities=8% Similarity=-0.020 Sum_probs=127.9
Q ss_pred EEEcCCCCEEEEeeC-CCe--EEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCce
Q 039044 6 LCFSPKANILVATSW-DNQ--VRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQP 82 (194)
Q Consensus 6 ~~~~p~~~~l~~~~~-d~~--i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 82 (194)
.+|+|||+.|+.++. ++. |.+||+.+++. ......+...+..+.|+||++.|+.++.++.|++||+.+++..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~-----~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~ 115 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVA-----TQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN 115 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEE-----EECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCce-----EEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce
Confidence 789999999998887 664 77778776532 2333345555557789999999999999999999999998876
Q ss_pred EEeccCCCcEEEEE--ecCCCCEEEEe----------------------eCCCeEEEEeCCCCCceeEEec--CCeEEEE
Q 039044 83 VTVAMHDAPIKEVA--WIPEMNLLATG----------------------SWDKTLKYWDTRQPNPVHTQQL--PDRCYAL 136 (194)
Q Consensus 83 ~~~~~~~~~v~~~~--~~~~~~~l~~~----------------------~~d~~v~vwd~~~~~~~~~~~~--~~~~~~~ 136 (194)
..+..+...+.... ++|++++++.. ..+..|.+||+.+++....... ....+.|
T Consensus 116 ~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 195 (388)
T 3pe7_A 116 VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIY 195 (388)
T ss_dssp EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEE
T ss_pred eeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEE
Confidence 66665555554444 48899988742 2346899999998875443333 3467899
Q ss_pred ec-CCCEEEEEcCC------CcEEEEECCCCCeeeEEeeCCCc-ceeeEEEEecCCCeeEEEE
Q 039044 137 TV-RYPLMVVGTAD------RNLVVFNLQNPQTEFKRINSPLK-YQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 137 ~~-~~~~l~~~~~d------g~v~~~d~~~~~~~~~~~~~~~~-~~v~~i~~~p~~~~l~~~~ 191 (194)
+| +++.|+....+ ..|.++|+..... ..+..... ..+..+.|+|||+.|+..+
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 196 RPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM--RKVKTHAEGESCTHEFWVPDGSALVYVS 256 (388)
T ss_dssp ETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC--EESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred CCCCCCEEEEEEecCCCCCcceEEEEeCCCCce--EEeeeCCCCcccccceECCCCCEEEEEe
Confidence 99 99988877653 3688888876542 22322222 3577889999999887654
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.80 E-value=5.5e-18 Score=130.79 Aligned_cols=180 Identities=8% Similarity=-0.001 Sum_probs=124.4
Q ss_pred eEEEcCCCCEEEEeeCC---------CeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEe
Q 039044 5 SLCFSPKANILVATSWD---------NQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWP 75 (194)
Q Consensus 5 ~~~~~p~~~~l~~~~~d---------~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d 75 (194)
+++|+|||++|+.++.+ +.+.+||+.++.. ..+..+...+...+|+|||+.|+.+ .++.|++|+
T Consensus 66 ~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~------~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~ 138 (740)
T 4a5s_A 66 DYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL------ITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKI 138 (740)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE------CCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEES
T ss_pred ceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcE------EEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEE
Confidence 47899999999998876 5667999988742 3345567789999999999999988 478999999
Q ss_pred cCCCCceEE-eccCCCcE-----------------EEEEecCCCCEEEEeeCCC--------------------------
Q 039044 76 LLSGGQPVT-VAMHDAPI-----------------KEVAWIPEMNLLATGSWDK-------------------------- 111 (194)
Q Consensus 76 ~~~~~~~~~-~~~~~~~v-----------------~~~~~~~~~~~l~~~~~d~-------------------------- 111 (194)
+.+++..+. ..++...+ ..+.|+|||++|+..+.|.
T Consensus 139 ~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~y 218 (740)
T 4a5s_A 139 EPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPY 218 (740)
T ss_dssp STTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEEC
T ss_pred CCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecC
Confidence 988765432 22332222 3589999999999875321
Q ss_pred ----------eEEEEeCCC---CC--ceeEEec------C---CeEEEEecCCCEEEEEcC----CCcEEEEECCCCC--
Q 039044 112 ----------TLKYWDTRQ---PN--PVHTQQL------P---DRCYALTVRYPLMVVGTA----DRNLVVFNLQNPQ-- 161 (194)
Q Consensus 112 ----------~v~vwd~~~---~~--~~~~~~~------~---~~~~~~~~~~~~l~~~~~----dg~v~~~d~~~~~-- 161 (194)
.|++||+.+ ++ ....+.. + ...++|+|+++.++.... +..|++||+.+++
T Consensus 219 p~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~ 298 (740)
T 4a5s_A 219 PKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGR 298 (740)
T ss_dssp CBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTE
T ss_pred CCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccc
Confidence 588899988 63 2222322 1 246789999996665432 3469999998876
Q ss_pred --ee--eEEeeCCCcceee-----EEEEecCCCeeE-EEE
Q 039044 162 --TE--FKRINSPLKYQTR-----CVAAFPDQQGFL-VCI 191 (194)
Q Consensus 162 --~~--~~~~~~~~~~~v~-----~i~~~p~~~~l~-~~~ 191 (194)
.. .......+...+. .+.|+|||+.++ ..+
T Consensus 299 ~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s 338 (740)
T 4a5s_A 299 WNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIIS 338 (740)
T ss_dssp EEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEE
T ss_pred cceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEE
Confidence 11 1111122444443 789999999877 543
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.79 E-value=7.6e-16 Score=108.21 Aligned_cols=177 Identities=12% Similarity=0.064 Sum_probs=129.7
Q ss_pred CCeeeEEEcCCCCEEEEeeCC------------------------CeEEEEecccCCcccccccccccCCCCCeeEEEEe
Q 039044 1 DSVSSLCFSPKANILVATSWD------------------------NQVRCWEISRGGTGVASVPKASISHDHPVLCSTWK 56 (194)
Q Consensus 1 ~~v~~~~~~p~~~~l~~~~~d------------------------~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 56 (194)
+.|.+++++|+|+++++...+ +.|.+||..++.. .......+-.....++++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~----~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI----LQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE----EEEECTTTCSSEEEEEEC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE----EeccCCCccCCceEEEEC
Confidence 358899999999999888777 4799999876642 111112344578899999
Q ss_pred cCCCeEEEecCCCeEEEEecCCCC-ceEEe---------ccCCCcEEEEEecC-CCCEEEEee-CCCeEEEEeCCCCCce
Q 039044 57 DDGTTVFSGGCDKQVKMWPLLSGG-QPVTV---------AMHDAPIKEVAWIP-EMNLLATGS-WDKTLKYWDTRQPNPV 124 (194)
Q Consensus 57 ~~~~~l~~~~~d~~i~~~d~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~d~~v~vwd~~~~~~~ 124 (194)
|+++++++...++.|++|+..... .+..+ ..+......++++| +++++++.+ .++.|++|| ..++.+
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~ 178 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFV 178 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEE
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEE
Confidence 999988888889999999976542 45555 23445789999999 788888876 689999999 456665
Q ss_pred eEEec-------------CCeEEEEecC-CCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEec
Q 039044 125 HTQQL-------------PDRCYALTVR-YPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFP 182 (194)
Q Consensus 125 ~~~~~-------------~~~~~~~~~~-~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p 182 (194)
..+.. ....++++|+ +..+++...++.|++||..+++.........+...+..++|+|
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p 250 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP 250 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET
T ss_pred EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC
Confidence 55431 1457899998 6777777788999999998665432222233456678899998
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.76 E-value=1.3e-16 Score=121.71 Aligned_cols=176 Identities=10% Similarity=0.043 Sum_probs=123.2
Q ss_pred eeeEEEcCCCCEEEEeeCC----------CeEEEEeccc------CCccccccccccc-CCCCCeeEEEEecCCCeEEEe
Q 039044 3 VSSLCFSPKANILVATSWD----------NQVRCWEISR------GGTGVASVPKASI-SHDHPVLCSTWKDDGTTVFSG 65 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d----------~~i~i~~~~~------~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~ 65 (194)
+.+++|+|||+.|+.++.+ ..|++|++.. +. ...+. .+...+..++|+|||++|+.+
T Consensus 132 ~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~------~~~l~~~~~~~~~~~~~SpDG~~la~~ 205 (662)
T 3azo_A 132 WADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA------VRELSDDAHRFVTGPRLSPDGRQAVWL 205 (662)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG------SEESSCSCSSEECCCEECTTSSEEEEE
T ss_pred ccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc------eeEEEecCCCcccCceECCCCCEEEEE
Confidence 5789999999999988876 5799999877 32 22333 445678889999999999877
Q ss_pred cCC--------CeEEEEecC-CC---CceEEeccCCCcEEEEEecCCCCEEEEeeCCC--eEEEEeCCCCCceeEEecC-
Q 039044 66 GCD--------KQVKMWPLL-SG---GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDK--TLKYWDTRQPNPVHTQQLP- 130 (194)
Q Consensus 66 ~~d--------~~i~~~d~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~vwd~~~~~~~~~~~~~- 130 (194)
+.+ ..|.+||+. ++ +.......+...+..++|+|+|+++++++.++ .|.+||+.+++.......+
T Consensus 206 ~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~ 285 (662)
T 3azo_A 206 AWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREE 285 (662)
T ss_dssp EECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSS
T ss_pred ECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccc
Confidence 754 379999998 45 33333344578899999999999888887788 6777777666543222111
Q ss_pred ----------CeEEEEecCCCEEEEEcCCCcEEEE--ECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEE
Q 039044 131 ----------DRCYALTVRYPLMVVGTADRNLVVF--NLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLV 189 (194)
Q Consensus 131 ----------~~~~~~~~~~~~l~~~~~dg~v~~~--d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~ 189 (194)
...++++++++.+++++. +.+++| |+.+++ ...+. .+...+..+. +++++.++.
T Consensus 286 ~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~--~~~l~-~~~~~~~~~~-s~~~~~~~~ 351 (662)
T 3azo_A 286 EFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE--LVDAA-GPWTEWAATL-TVSGTRAVG 351 (662)
T ss_dssp BSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE--EEECC-SSCCEEEEEE-EEETTEEEE
T ss_pred cccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc--EEEec-CCCCeEEEEE-ecCCCEEEE
Confidence 346788899999999998 999999 555443 33332 3445566551 555555443
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.75 E-value=2.8e-15 Score=103.14 Aligned_cols=186 Identities=10% Similarity=0.040 Sum_probs=130.2
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEe-cCCCeEEEecC-CCeEEEEecCCC
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWK-DDGTTVFSGGC-DKQVKMWPLLSG 79 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~~~~~-d~~i~~~d~~~~ 79 (194)
.+.+++++|+++++++...++.|.+|+.................+...+..+++. ++++++++... ++.|.+|| .++
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g 109 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYG 109 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTS
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCC
Confidence 4678999999998888888999999997633110000000011234568899995 67766666643 88999999 566
Q ss_pred CceEEec-cCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec-----CCeEEEEecCCCEEEEEcCCCcEE
Q 039044 80 GQPVTVA-MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL-----PDRCYALTVRYPLMVVGTADRNLV 153 (194)
Q Consensus 80 ~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~dg~v~ 153 (194)
+.+..+. .+...+..++++|+|+++++...++.|.+||.. ++.+..+.. ....++++++++.+++...++.|+
T Consensus 110 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~ 188 (286)
T 1q7f_A 110 QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVK 188 (286)
T ss_dssp CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEE
T ss_pred cEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEE
Confidence 6666553 334678999999999988877778999999964 555555432 246789999998888878889999
Q ss_pred EEECCCCCeeeEEeeC-CCcceeeEEEEecCCCeeEEEE
Q 039044 154 VFNLQNPQTEFKRINS-PLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 154 ~~d~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
+||... +. ...... .....+..++++|+|+.+++..
T Consensus 189 ~~~~~g-~~-~~~~~~~g~~~~p~~i~~d~~G~l~v~~~ 225 (286)
T 1q7f_A 189 VFNYEG-QY-LRQIGGEGITNYPIGVGINSNGEILIADN 225 (286)
T ss_dssp EEETTC-CE-EEEESCTTTSCSEEEEEECTTCCEEEEEC
T ss_pred EEcCCC-CE-EEEEccCCccCCCcEEEECCCCCEEEEeC
Confidence 999854 32 222221 2224678999999998777653
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.75 E-value=5.9e-15 Score=101.53 Aligned_cols=180 Identities=12% Similarity=0.076 Sum_probs=126.5
Q ss_pred CeeeEEE-cCCCCEEEEeeC-CCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCC
Q 039044 2 SVSSLCF-SPKANILVATSW-DNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 2 ~v~~~~~-~p~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 79 (194)
.+..+++ .++++++++... ++.|.+|+.. +.. .......+...+..++++|+++++++...++.|.+||.. +
T Consensus 78 ~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~-g~~----~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 151 (286)
T 1q7f_A 78 YPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-GQF----VRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-G 151 (286)
T ss_dssp SEEEEEEETTTTEEEEEECGGGCEEEEECTT-SCE----EEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CceEEEEEcCCCeEEEEcCCCCCEEEEECCC-CcE----EEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-C
Confidence 3568888 467776666643 7899999943 321 111112344568899999999988888888999999964 5
Q ss_pred CceEEec--cCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec-----CCeEEEEecCCCEEEEEcCCC-c
Q 039044 80 GQPVTVA--MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL-----PDRCYALTVRYPLMVVGTADR-N 151 (194)
Q Consensus 80 ~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~dg-~ 151 (194)
+.+..+. .+...+..++++|+++++++...++.|++||.. ++.+..+.. ....++++++++.+++...++ .
T Consensus 152 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~ 230 (286)
T 1q7f_A 152 NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN 230 (286)
T ss_dssp CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE
T ss_pred CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE
Confidence 5555553 344578999999999988877789999999974 455555432 235789999998888887776 9
Q ss_pred EEEEECCCCCeeeEEee-CCCcceeeEEEEecCCCeeEEE
Q 039044 152 LVVFNLQNPQTEFKRIN-SPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 152 v~~~d~~~~~~~~~~~~-~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
|.+||... +. ..... ......+.+++++|+|+.+++.
T Consensus 231 i~~~~~~g-~~-~~~~~~~~~~~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 231 LTIFTQDG-QL-ISALESKVKHAQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp EEEECTTS-CE-EEEEEESSCCSCEEEEEEETTTEEEEEE
T ss_pred EEEECCCC-CE-EEEEcccCCCCcceeEEECCCCcEEEEC
Confidence 99999653 32 22222 2222346799999999877663
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=4e-16 Score=118.94 Aligned_cols=179 Identities=12% Similarity=0.029 Sum_probs=121.7
Q ss_pred eEEEc--CCCCE-EEEeeC-CCeEEEEecc--c-CCcccccccccccC-----CCCCeeEEEEecCCCeEEEecCC----
Q 039044 5 SLCFS--PKANI-LVATSW-DNQVRCWEIS--R-GGTGVASVPKASIS-----HDHPVLCSTWKDDGTTVFSGGCD---- 68 (194)
Q Consensus 5 ~~~~~--p~~~~-l~~~~~-d~~i~i~~~~--~-~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~d---- 68 (194)
...|+ ||++. |+.++. +..|.++++. . +. ...+.. +...+..++|+|||+.|+.++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~------~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~ 154 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV------PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGE 154 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC------CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSS
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC------CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCC
Confidence 44455 99988 665543 4556666655 2 22 122222 56678899999999999988876
Q ss_pred ------CeEEEEecCCC-----CceEEec-cCCCcEEEEEecCCCCEEEEeeCC--------CeEEEEeCC-CC---Cce
Q 039044 69 ------KQVKMWPLLSG-----GQPVTVA-MHDAPIKEVAWIPEMNLLATGSWD--------KTLKYWDTR-QP---NPV 124 (194)
Q Consensus 69 ------~~i~~~d~~~~-----~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------~~v~vwd~~-~~---~~~ 124 (194)
..|++||+.++ .....+. .+...+..++|+|||++|+.++.+ ..|++||+. ++ +..
T Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~ 234 (662)
T 3azo_A 155 GPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTR 234 (662)
T ss_dssp STTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEE
T ss_pred CCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccE
Confidence 58999999872 3344555 566788899999999999987755 379999998 45 222
Q ss_pred eEEe---cCCeEEEEecCCCEEEEEcCCC--cEEEEECCCCCeeeEEeeCCCcce--------eeEEEEecCCCeeEEEE
Q 039044 125 HTQQ---LPDRCYALTVRYPLMVVGTADR--NLVVFNLQNPQTEFKRINSPLKYQ--------TRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 125 ~~~~---~~~~~~~~~~~~~~l~~~~~dg--~v~~~d~~~~~~~~~~~~~~~~~~--------v~~i~~~p~~~~l~~~~ 191 (194)
.... .....+.|+|+|+.++++..++ .|.+||+.+++. ..+...+... +..++|+|+++.++++.
T Consensus 235 ~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~--~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~ 312 (662)
T 3azo_A 235 TLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAA--TQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHG 312 (662)
T ss_dssp EEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCE--EESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEB
T ss_pred EeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCce--eecccccccccCccccccCceEeEeCCCEEEEEEE
Confidence 2222 3346789999999888888888 566667655542 2222222111 46789999998887764
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.73 E-value=6.2e-15 Score=103.56 Aligned_cols=187 Identities=11% Similarity=0.028 Sum_probs=129.9
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccc-----cccCCCCCeeEEEEec-CCCeEEEec-CCCeEEEE
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPK-----ASISHDHPVLCSTWKD-DGTTVFSGG-CDKQVKMW 74 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-----~~~~~~~~i~~~~~~~-~~~~l~~~~-~d~~i~~~ 74 (194)
....++++|+++++++...++.|++|+............. ....+-.....++++| +++++++.+ .++.|++|
T Consensus 92 ~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~ 171 (329)
T 3fvz_A 92 LPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQF 171 (329)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEE
T ss_pred CceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEE
Confidence 3578999999998888888999999997654210000000 0023444688999999 788888876 68999999
Q ss_pred ecCCCCceEEecc----------CCCcEEEEEecCC-CCEEEEeeCCCeEEEEeCCCCCceeEEecC-----CeEEEEec
Q 039044 75 PLLSGGQPVTVAM----------HDAPIKEVAWIPE-MNLLATGSWDKTLKYWDTRQPNPVHTQQLP-----DRCYALTV 138 (194)
Q Consensus 75 d~~~~~~~~~~~~----------~~~~v~~~~~~~~-~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~-----~~~~~~~~ 138 (194)
+ .+++.+..+.. +......++++|+ +.++++...++.|++||..+++.+..+... ...++++|
T Consensus 172 ~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p 250 (329)
T 3fvz_A 172 S-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP 250 (329)
T ss_dssp C-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET
T ss_pred c-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC
Confidence 9 55666665532 2234889999998 777777778899999999988887776432 34667777
Q ss_pred ------CCCEEEEEcCCCcEEEEECCCCCeeeEEee--CCCcceeeEEEEecCCCeeEEE
Q 039044 139 ------RYPLMVVGTADRNLVVFNLQNPQTEFKRIN--SPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 139 ------~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~--~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
+++..++...+..|++||+.+++.. ..+. ..+...+..++++|+|..+++.
T Consensus 251 g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~-~~~~~~~~~~~~p~~ia~~~dG~lyvad 309 (329)
T 3fvz_A 251 GFLFAVNGKPYFGDQEPVQGFVMNFSSGEII-DVFKPVRKHFDMPHDIVASEDGTVYIGD 309 (329)
T ss_dssp TEEEEEECCCCTTCSCCCCEEEEETTTCCEE-EEECCSSSCCSSEEEEEECTTSEEEEEE
T ss_pred CEEEEeCCCEEeccCCCcEEEEEEcCCCeEE-EEEcCCCCccCCeeEEEECCCCCEEEEE
Confidence 3333333344568999999887643 2221 2344567999999999666554
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.72 E-value=2.1e-16 Score=113.25 Aligned_cols=182 Identities=9% Similarity=-0.033 Sum_probs=121.7
Q ss_pred eeeEEEcCCCCEEEEeeCC---CeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCC
Q 039044 3 VSSLCFSPKANILVATSWD---NQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d---~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 79 (194)
+..++|+|+|+.|+..... ..|.+|++..+.. .............+.|+|++++|+.++.++.|.+||+.++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~-----~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~ 112 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQA-----VQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETL 112 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEE-----EECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcE-----EEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCC
Confidence 5678899999998776543 3677888776532 1111222222334789999999999988999999999887
Q ss_pred CceEEeccCCCcEEE-------------------EEecCCCCEEEEe-----eCCCeEEEEeCCCCCceeEEec--CCeE
Q 039044 80 GQPVTVAMHDAPIKE-------------------VAWIPEMNLLATG-----SWDKTLKYWDTRQPNPVHTQQL--PDRC 133 (194)
Q Consensus 80 ~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~d~~v~vwd~~~~~~~~~~~~--~~~~ 133 (194)
+.......+...... +.|+|+++.++.. ..+..|.+||+.+++....... ....
T Consensus 113 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~ 192 (396)
T 3c5m_A 113 EEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGH 192 (396)
T ss_dssp CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEE
T ss_pred CcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCccccc
Confidence 765544434332222 3567777776654 3567899999988775443332 3457
Q ss_pred EEEec-CCCEEEEEcCC------CcEEEEECCCCCeeeEEeeCCC-cceeeEEEEecCCCeeEEEE
Q 039044 134 YALTV-RYPLMVVGTAD------RNLVVFNLQNPQTEFKRINSPL-KYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 134 ~~~~~-~~~~l~~~~~d------g~v~~~d~~~~~~~~~~~~~~~-~~~v~~i~~~p~~~~l~~~~ 191 (194)
+.|+| ++..++..+.+ ..|.+||+...+. ..+.... ...+..+.|+|+|+.|+...
T Consensus 193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (396)
T 3c5m_A 193 PIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV--RKIKEHAEGESCTHEFWIPDGSAMAYVS 256 (396)
T ss_dssp EEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC--EESSCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred ceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce--eEeeccCCCccccceEECCCCCEEEEEe
Confidence 88999 78877766543 3588899876542 2222221 34578899999999887764
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.72 E-value=2.8e-15 Score=115.29 Aligned_cols=183 Identities=11% Similarity=0.102 Sum_probs=124.8
Q ss_pred eeeEEEcCCCCEEEEeeCCC-----eEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCe-------
Q 039044 3 VSSLCFSPKANILVATSWDN-----QVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQ------- 70 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~-----~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~------- 70 (194)
+..++|+|||++|+.+..++ .|++||+.+++. ..... ....+..++|+|||+.|+.++.++.
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~-----~~~~~-~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKE-----LPDVL-ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEE-----EEEEE-EEECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC-----Ccccc-cCcccceEEEEeCCCEEEEEEECCcccccccc
Confidence 66899999999998766543 899999988753 11111 1122667999999999998877765
Q ss_pred ---------EEEEecCCCCce--EEec--cCCCcEEEEEecCCCCEEEEeeC-----CCeEEEEeCCC------CC-cee
Q 039044 71 ---------VKMWPLLSGGQP--VTVA--MHDAPIKEVAWIPEMNLLATGSW-----DKTLKYWDTRQ------PN-PVH 125 (194)
Q Consensus 71 ---------i~~~d~~~~~~~--~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----d~~v~vwd~~~------~~-~~~ 125 (194)
|++|++.+++.. ..+. .+...+..+.|+|+|++|+..+. +..|.+||+.+ ++ ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 999999877632 2222 24556789999999999887765 56899999976 42 233
Q ss_pred EEecC--CeEEEEecCCCEEEEEcCC----CcEEEEECCCCCe-eeEEeeCCCc-ceeeEEEEecCCCeeEEEE
Q 039044 126 TQQLP--DRCYALTVRYPLMVVGTAD----RNLVVFNLQNPQT-EFKRINSPLK-YQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 126 ~~~~~--~~~~~~~~~~~~l~~~~~d----g~v~~~d~~~~~~-~~~~~~~~~~-~~v~~i~~~p~~~~l~~~~ 191 (194)
.+..+ .....+++++..++..+.. +.|.+||+.++.. ....+..... ..+..+.|++++..+++..
T Consensus 281 ~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~ 354 (710)
T 2xdw_A 281 KLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYL 354 (710)
T ss_dssp EEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEE
T ss_pred EeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEE
Confidence 33322 2234688899887776653 3599999987642 1233333323 3678899997776666554
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.72 E-value=6.2e-16 Score=110.65 Aligned_cols=181 Identities=8% Similarity=-0.097 Sum_probs=119.0
Q ss_pred eeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEE--EecCCCeEEEe----------------
Q 039044 4 SSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCST--WKDDGTTVFSG---------------- 65 (194)
Q Consensus 4 ~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~l~~~---------------- 65 (194)
..++|+||++.|+.++.++.|++||+.+++. ......+...+.... ++|++++++..
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~-----~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~ 158 (388)
T 3pe7_A 84 FGGFLSPDDDALFYVKDGRNLMRVDLATLEE-----NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKF 158 (388)
T ss_dssp SSCEECTTSSEEEEEETTTEEEEEETTTCCE-----EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHH
T ss_pred cceEEcCCCCEEEEEeCCCeEEEEECCCCcc-----eeeeechhhcccccceeECCCCCeeccccccCcccccccccchh
Confidence 3678999999999999999999999988753 122223333343333 48899888742
Q ss_pred ------cCCCeEEEEecCCCCceEEeccCCCcEEEEEecC-CCCEEEEeeCC------CeEEEEeCCCCCceeEEecC--
Q 039044 66 ------GCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIP-EMNLLATGSWD------KTLKYWDTRQPNPVHTQQLP-- 130 (194)
Q Consensus 66 ------~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~v~vwd~~~~~~~~~~~~~-- 130 (194)
..+..|.+||+.+++. ..+..+...+..++|+| +|++|+.+..+ ..|.++|...++........
T Consensus 159 ~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~ 237 (388)
T 3pe7_A 159 HEFYFTKPCCRLMRVDLKTGES-TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEG 237 (388)
T ss_dssp HHHGGGCCCEEEEEEETTTCCE-EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTT
T ss_pred hhhhccCCcceEEEEECCCCce-EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCC
Confidence 2447899999988764 44445677889999999 99998877753 37888888765433222222
Q ss_pred --CeEEEEecCCCEEEEEcC-CC----cEEEEECCCCCeeeEEeeCCCcc---eeeEEEEecCCCeeEEE
Q 039044 131 --DRCYALTVRYPLMVVGTA-DR----NLVVFNLQNPQTEFKRINSPLKY---QTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 131 --~~~~~~~~~~~~l~~~~~-dg----~v~~~d~~~~~~~~~~~~~~~~~---~v~~i~~~p~~~~l~~~ 190 (194)
.....|+|+|+.|+..+. ++ .|++||+.+++............ ....+.|+|||+.|+..
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~ 307 (388)
T 3pe7_A 238 ESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVD 307 (388)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC---
T ss_pred cccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeE
Confidence 335689999997765443 22 39999999876432222111111 12334799999988864
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.71 E-value=4.5e-15 Score=105.59 Aligned_cols=180 Identities=12% Similarity=0.079 Sum_probs=121.6
Q ss_pred eEEEcCCCCEEEEee----------CCCeEEEEecccCCccccc-ccccccCCCCCeeEEEEecCCCeEEEecC--CCeE
Q 039044 5 SLCFSPKANILVATS----------WDNQVRCWEISRGGTGVAS-VPKASISHDHPVLCSTWKDDGTTVFSGGC--DKQV 71 (194)
Q Consensus 5 ~~~~~p~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i 71 (194)
.++|+|++++++++. .++.|.+||..+.+..... .......+......++++|+|++|+++.. ++.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 689999999999886 3678999998765421000 00000112345678999999999998864 5789
Q ss_pred EEEecCCCCceEE-ecc-------------------------------CCCc----------------------------
Q 039044 72 KMWPLLSGGQPVT-VAM-------------------------------HDAP---------------------------- 91 (194)
Q Consensus 72 ~~~d~~~~~~~~~-~~~-------------------------------~~~~---------------------------- 91 (194)
.+||+.+++.+.. +.. ....
T Consensus 134 ~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 213 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDK 213 (361)
T ss_dssp EEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSE
T ss_pred EEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCE
Confidence 9999876554433 100 0000
Q ss_pred ---------E------------------------------E---EEEecCCCCEEEEeeC-----------CCeEEEEeC
Q 039044 92 ---------I------------------------------K---EVAWIPEMNLLATGSW-----------DKTLKYWDT 118 (194)
Q Consensus 92 ---------v------------------------------~---~~~~~~~~~~l~~~~~-----------d~~v~vwd~ 118 (194)
| . .++|+|++++++++.. .+.|.+||+
T Consensus 214 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~ 293 (361)
T 2oiz_A 214 AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDT 293 (361)
T ss_dssp EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEET
T ss_pred EEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEEC
Confidence 0 0 1567777776665532 348999999
Q ss_pred CCCCceeEEecC-CeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCC
Q 039044 119 RQPNPVHTQQLP-DRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQ 185 (194)
Q Consensus 119 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~ 185 (194)
.+.+.+.++... ...++++|++++|++++. +.|.+||+.+++..............+.++++|+|+
T Consensus 294 ~t~~~v~~i~~~~p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 294 KTKQRVARIPGRDALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp TTTEEEEEEECTTCCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CCCcEEEEEecCCeeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 999888776543 568899999999998887 999999999872222222233455678999999986
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.70 E-value=1.9e-15 Score=106.63 Aligned_cols=173 Identities=7% Similarity=0.071 Sum_probs=112.0
Q ss_pred CeeeEEEcCCCCEEEEeeCC---Ce--EEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCC--------
Q 039044 2 SVSSLCFSPKANILVATSWD---NQ--VRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCD-------- 68 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d---~~--i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------- 68 (194)
.+..++|+|||+.|+.++.+ +. |.+|++..++. ..+..... +..+.|+|+++.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~------~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~ 132 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSS------KKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFI 132 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEE------EEEEEESE-EEEEEECTTSSEEEEEEECCCC-----
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCce------EEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcE
Confidence 46789999999999887654 34 66667665432 12222233 8999999999988887632
Q ss_pred -------------------CeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCC-------eEEEEeCCCCC
Q 039044 69 -------------------KQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDK-------TLKYWDTRQPN 122 (194)
Q Consensus 69 -------------------~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-------~v~vwd~~~~~ 122 (194)
..|.+||+.+++.+..+.. . .+..++|+|+| +++++..++ ...+|.+.+++
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~ 209 (347)
T 2gop_A 133 FEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK 209 (347)
T ss_dssp ----CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE
T ss_pred EEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc
Confidence 5689999988776455544 3 78899999999 777775542 33444333443
Q ss_pred ceeEEecCCeEEEEecCCCEEEEEcCC--------CcEEEEECCCCCeeeEEeeCCCcceeeE-EEEecCCCeeEEEE
Q 039044 123 PVHTQQLPDRCYALTVRYPLMVVGTAD--------RNLVVFNLQNPQTEFKRINSPLKYQTRC-VAAFPDQQGFLVCI 191 (194)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~l~~~~~d--------g~v~~~d~~~~~~~~~~~~~~~~~~v~~-i~~~p~~~~l~~~~ 191 (194)
....... .....++|+|+.|+.++.+ ..|.+|| +++ ...+...+...+.. +.|+ ++ .++++.
T Consensus 210 ~~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~--~~~l~~~~~~~~~~~~~~s-dg-~~~~~~ 280 (347)
T 2gop_A 210 EEKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKE--VMGILDEVDRGVGQAKIKD-GK-VYFTLF 280 (347)
T ss_dssp EEEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSC--EEESSTTCCSEEEEEEEET-TE-EEEEEE
T ss_pred eEEeccC-cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCc--eEeccccCCcccCCccEEc-Cc-EEEEEe
Confidence 2221222 3334459999988877654 3588888 333 23344445667776 8998 87 666554
No 178
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.70 E-value=9.3e-14 Score=97.50 Aligned_cols=183 Identities=10% Similarity=-0.004 Sum_probs=126.1
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCC----CeEEEEecCC
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCD----KQVKMWPLLS 78 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~~~d~~~ 78 (194)
+.+++|+|++++++++..++.|.+||..++.. ......+...+.+++++|+++++++...+ +.|.+||.++
T Consensus 47 ~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~-----~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 47 LEGLNFDRQGQLFLLDVFEGNIFKINPETKEI-----KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCE-----EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred ccCcEECCCCCEEEEECCCCEEEEEeCCCCcE-----EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCC
Confidence 56889999999888888899999999876642 11122355679999999999988877666 6899999887
Q ss_pred CCceEEec--cCCCcEEEEEecCCCCEEEEeeC------CCeEEEEeCCCCCceeEE--ecCCeEEEEecCCCEEEE-Ec
Q 039044 79 GGQPVTVA--MHDAPIKEVAWIPEMNLLATGSW------DKTLKYWDTRQPNPVHTQ--QLPDRCYALTVRYPLMVV-GT 147 (194)
Q Consensus 79 ~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~------d~~v~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~l~~-~~ 147 (194)
+.....+. .+...+.+++++|+|+++++... .+.|..+|..+++..... ......++++|+++.++. .+
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~ 201 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTET 201 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred CEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeC
Confidence 76543332 23457899999999988776653 356777776654433221 123467889999986654 45
Q ss_pred CCCcEEEEECCCC-Ceee--E-E-e-eCCCcceeeEEEEecCCCeeEEE
Q 039044 148 ADRNLVVFNLQNP-QTEF--K-R-I-NSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 148 ~dg~v~~~d~~~~-~~~~--~-~-~-~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
.++.|.+||+++. .... . . . .......+..++++++|+.+++.
T Consensus 202 ~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~ 250 (333)
T 2dg1_A 202 TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAM 250 (333)
T ss_dssp GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEE
T ss_pred CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEE
Confidence 6788999999642 2111 0 1 1 11111357889999999877664
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=2.1e-14 Score=99.30 Aligned_cols=179 Identities=9% Similarity=0.025 Sum_probs=125.8
Q ss_pred eeeEEEcCCCC-EEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 3 VSSLCFSPKAN-ILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 3 v~~~~~~p~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
..+++|+|+++ +++++..++.|..|+...+ . .....+...+.+++++|+++++++...++.|.+||..+++.
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~------~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L------SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEW 102 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E------EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCE
T ss_pred ccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e------EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcE
Confidence 46789999998 7888888999999998765 2 22234556789999999999888887788999999977765
Q ss_pred eEEeccC----CCcEEEEEecCCCCEEEEe----e-------------CCCeEEEEeCCCCCceeEEe--cCCeEEEEec
Q 039044 82 PVTVAMH----DAPIKEVAWIPEMNLLATG----S-------------WDKTLKYWDTRQPNPVHTQQ--LPDRCYALTV 138 (194)
Q Consensus 82 ~~~~~~~----~~~v~~~~~~~~~~~l~~~----~-------------~d~~v~vwd~~~~~~~~~~~--~~~~~~~~~~ 138 (194)
....... ...+..++++|+|+++++. + ..+.|..++.. ++...... .....++++|
T Consensus 103 ~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~ 181 (296)
T 3e5z_A 103 ESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLP 181 (296)
T ss_dssp EEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECT
T ss_pred EEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECC
Confidence 4332211 2346789999999988873 2 13466667665 43322221 2236789999
Q ss_pred CCCEEEEEcCCCcEEEEECC-CCCe-e-eEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 139 RYPLMVVGTADRNLVVFNLQ-NPQT-E-FKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 139 ~~~~l~~~~~dg~v~~~d~~-~~~~-~-~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
+++.+++.+.++.|++||+. +++. . .... ......+..++++++|+.+++.
T Consensus 182 dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 182 SGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp TSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE
T ss_pred CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc
Confidence 99988777888999999987 3332 1 1222 3344556789999999876654
No 180
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=7.6e-14 Score=95.08 Aligned_cols=181 Identities=12% Similarity=-0.014 Sum_probs=126.7
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.+.+++++|+++++++.. ++.|.+|+...... ..........+..++++++++.+++...++.|.+|+..+...
T Consensus 68 ~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-----~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 68 QPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-----TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ 141 (270)
T ss_dssp SCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-----EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSC
T ss_pred CcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-----eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCcee
Confidence 357899999998666655 88999999765432 111112235688999999999888877888999998655443
Q ss_pred eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEe---cCCeEEEEecCCCEEEEEcCCCcEEEEECC
Q 039044 82 PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ---LPDRCYALTVRYPLMVVGTADRNLVVFNLQ 158 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~ 158 (194)
..........+..++++++++++++...++.|.+||........... .....+++++++..+++...++.|.+||..
T Consensus 142 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 142 TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 32222333467899999999877777778899999988665433221 233578899999777777778899999987
Q ss_pred CCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 159 NPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 159 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
..... .........+.+++++|+|+.+++.
T Consensus 222 ~~~~~--~~~~~~~~~p~~i~~~~~g~l~v~~ 251 (270)
T 1rwi_B 222 STTST--VLPFTGLNTPLAVAVDSDRTVYVAD 251 (270)
T ss_dssp CSCCE--ECCCCSCSCEEEEEECTTCCEEEEE
T ss_pred CCcce--eeccCCCCCceeEEECCCCCEEEEE
Confidence 64422 2222222467899999999866654
No 181
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.68 E-value=1.8e-14 Score=110.58 Aligned_cols=181 Identities=8% Similarity=-0.009 Sum_probs=118.2
Q ss_pred CeeeEEEcCCCCEEE-----EeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCe------
Q 039044 2 SVSSLCFSPKANILV-----ATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQ------ 70 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~-----~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~------ 70 (194)
.+..++|+|||++|| .|+.+..|++||+.+++.. ...... ......++|+|||+.|+.++.+..
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~---~~~~~~--~~~~~~~~wspDg~~l~~~~~d~~~~~~~~ 196 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS---KVDVIE--GGKYATPKWTPDSKGFYYEWLPTDPSIKVD 196 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC---SSCCBS--CCTTCCCEECTTSSEEEEEECCCCTTSCGG
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCc---CCcccC--cccccceEEecCCCEEEEEEecCCCCCccc
Confidence 367899999999998 4555678999999887531 011111 111267999999999998888765
Q ss_pred -------EEEEecCCCCce--EEe--ccCCCcEEEEEecCCCCEEEEeeCCC----eEEEEeCCCCCceeEEec--CCeE
Q 039044 71 -------VKMWPLLSGGQP--VTV--AMHDAPIKEVAWIPEMNLLATGSWDK----TLKYWDTRQPNPVHTQQL--PDRC 133 (194)
Q Consensus 71 -------i~~~d~~~~~~~--~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~----~v~vwd~~~~~~~~~~~~--~~~~ 133 (194)
|++|++.++... ..+ ..+...+..+.|+|+|++|+..+.++ .|.+||..+++....... ....
T Consensus 197 ~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~ 276 (695)
T 2bkl_A 197 ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYE 276 (695)
T ss_dssp GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEE
T ss_pred cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEE
Confidence 999999887632 222 33556788999999999988877666 677777655543322222 2223
Q ss_pred EEEecCCCEEEEEcC----CCcEEEEECCCCCe-eeEEeeCCC-cceeeEEEEecCCCeeEEE
Q 039044 134 YALTVRYPLMVVGTA----DRNLVVFNLQNPQT-EFKRINSPL-KYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 134 ~~~~~~~~~l~~~~~----dg~v~~~d~~~~~~-~~~~~~~~~-~~~v~~i~~~p~~~~l~~~ 190 (194)
..+ +++. ++..+. ++.|.+||+.+++. ....+.... ...+..++|+ ++..+++.
T Consensus 277 ~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~ 336 (695)
T 2bkl_A 277 VHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEY 336 (695)
T ss_dssp EEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEE
T ss_pred EEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEE
Confidence 333 6666 544443 57899999987642 122333322 4567888888 55555554
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=3.4e-14 Score=97.44 Aligned_cols=169 Identities=13% Similarity=0.023 Sum_probs=128.5
Q ss_pred CCCEEEEeeCCCeEEEEecccCCcccccccccccCCC-CCeeEEEEecCCCeEEEecCCCeEEEEecCCCCceEEeccC-
Q 039044 11 KANILVATSWDNQVRCWEISRGGTGVASVPKASISHD-HPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMH- 88 (194)
Q Consensus 11 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~- 88 (194)
.+++|++++.|+.|.+||..+++. ......+. ..+.++.+.|+|+.+++ .++.|..||. +++.+..+..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~-----~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~ 75 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEI-----VWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAPA 75 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEE-----EEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECCT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeE-----EEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCCC
Confidence 357899999999999999877743 23333333 46889999999998883 4778999998 78888888764
Q ss_pred CCcEEEEEecCCCCEEEEeeC-CCeEEEEeCCCCCceeEEec---------CCeEEEEecCCCEEEEEcCCCcEEEEECC
Q 039044 89 DAPIKEVAWIPEMNLLATGSW-DKTLKYWDTRQPNPVHTQQL---------PDRCYALTVRYPLMVVGTADRNLVVFNLQ 158 (194)
Q Consensus 89 ~~~v~~~~~~~~~~~l~~~~~-d~~v~vwd~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~~~dg~v~~~d~~ 158 (194)
...+.++.+.++|+++++.+. ++.+..+|. +++.+.++.. ....+++.++++++++...++.|..||..
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 357889999999999999887 778888886 6776665542 12345778899999999999999999998
Q ss_pred CCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 159 NPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 159 ~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++....... ...+.++...|+|..++++..
T Consensus 155 -G~~~w~~~~---~~~~~~~~~~~~g~~~v~~~~ 184 (276)
T 3no2_A 155 -GQLLNSVKL---SGTPFSSAFLDNGDCLVACGD 184 (276)
T ss_dssp -SCEEEEEEC---SSCCCEEEECTTSCEEEECBT
T ss_pred -CCEEEEEEC---CCCccceeEcCCCCEEEEeCC
Confidence 765444332 234567788899988887653
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.67 E-value=9.6e-14 Score=95.99 Aligned_cols=181 Identities=12% Similarity=0.075 Sum_probs=122.5
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEE----ec-----------
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFS----GG----------- 66 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~----~~----------- 66 (194)
.+.+++++|+++++++...++.|.+||..++...... ..........+..++++|+|+++++ |+
T Consensus 70 ~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~-~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~ 148 (296)
T 3e5z_A 70 HQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA-DSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEM 148 (296)
T ss_dssp SEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE-CEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCC
T ss_pred CcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe-eccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccc
Confidence 4678999999998888777789999998665421100 0000111234678999999998887 33
Q ss_pred --CCCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCC-CCCc---eeEEe---cCCeEEEEe
Q 039044 67 --CDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTR-QPNP---VHTQQ---LPDRCYALT 137 (194)
Q Consensus 67 --~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~-~~~~---~~~~~---~~~~~~~~~ 137 (194)
..+.|..++.. .....+..+......++|+|+++.+++.+.++.|.+||+. .++. ...+. .....++++
T Consensus 149 ~~~~~~l~~~~~~--g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d 226 (296)
T 3e5z_A 149 ELPGRWVFRLAPD--GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVD 226 (296)
T ss_dssp CSSSCEEEEECTT--SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEB
T ss_pred cCCCcEEEEECCC--CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEEC
Confidence 13456666654 3444455566778999999999988777778999999987 4443 12221 123578999
Q ss_pred cCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEE-ecCCCeeEEEE
Q 039044 138 VRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAA-FPDQQGFLVCI 191 (194)
Q Consensus 138 ~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~-~p~~~~l~~~~ 191 (194)
++|+..++. ++.|.+||.. ++ .......+ .. +.+++| .|+++.|.++.
T Consensus 227 ~~G~l~v~~--~~~v~~~~~~-g~-~~~~~~~~-~~-~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 227 AGGLIWASA--GDGVHVLTPD-GD-ELGRVLTP-QT-TSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp TTSCEEEEE--TTEEEEECTT-SC-EEEEEECS-SC-CCEEEEESTTSCEEEEEE
T ss_pred CCCCEEEEc--CCeEEEECCC-CC-EEEEEECC-CC-ceeEEEECCCCCEEEEEc
Confidence 999866655 7889999987 33 23333332 33 889999 58988887765
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.67 E-value=2.5e-15 Score=107.57 Aligned_cols=177 Identities=13% Similarity=0.066 Sum_probs=119.1
Q ss_pred EEEcCCCCEEEEe-----eCCCeEEEEecccCCcccccccccccCCCCCeeEEEEec-CCCeEEEecCC------CeEEE
Q 039044 6 LCFSPKANILVAT-----SWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD-DGTTVFSGGCD------KQVKM 73 (194)
Q Consensus 6 ~~~~p~~~~l~~~-----~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------~~i~~ 73 (194)
+.|+|+++.++.+ ..+..|.+||+.++.. .....+...+..+.|+| +++.|+..+.+ ..|.+
T Consensus 147 ~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~------~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~ 220 (396)
T 3c5m_A 147 RDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL------EVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWL 220 (396)
T ss_dssp GGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE------EEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEE
T ss_pred cccCCCCcceeeeeeccCCCcceEEEEECCCCcE------EeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEE
Confidence 3567777766654 3567899999877642 22224566788999999 78877665443 36888
Q ss_pred EecCCCCceEEeccC--CCcEEEEEecCCCCEEEEeeCC-----CeEEEEeCCCCCceeEEecCCeEEEEec-CCCEEEE
Q 039044 74 WPLLSGGQPVTVAMH--DAPIKEVAWIPEMNLLATGSWD-----KTLKYWDTRQPNPVHTQQLPDRCYALTV-RYPLMVV 145 (194)
Q Consensus 74 ~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 145 (194)
||+..++. ..+..+ ...+..++|+|+|++|+.++.+ +.|++||+.+++.......+.....++| +++.++.
T Consensus 221 ~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~s~~dg~~l~~ 299 (396)
T 3c5m_A 221 VNEDGSNV-RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNFDGSLMVG 299 (396)
T ss_dssp EETTSCCC-EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEEEEEECSSSSEEEE
T ss_pred EECCCCce-eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCCCCccCCCCceEEE
Confidence 88866543 333333 2358889999999988777554 4599999988775443333322388999 9998887
Q ss_pred Ec----------------CCCcEEEEECCCCCeeeEEeeCCCcc-----------eeeEEEEecCCCeeEEEEe
Q 039044 146 GT----------------ADRNLVVFNLQNPQTEFKRINSPLKY-----------QTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 146 ~~----------------~dg~v~~~d~~~~~~~~~~~~~~~~~-----------~v~~i~~~p~~~~l~~~~~ 192 (194)
++ .++.|++||+.+++... +.. +.. .+..+.|+|+|+.|+.++.
T Consensus 300 ~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~--l~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 300 DGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQK--LCK-HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp EECCC----------CCCCCCEEEEEETTTTBCCE--EEE-CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred ecCCcceeeccccccccCCCCcEEEEecccCceEE--ccC-CCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 54 34679999998765322 211 111 2567899999999887764
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.67 E-value=8.8e-15 Score=102.74 Aligned_cols=178 Identities=8% Similarity=-0.058 Sum_probs=126.5
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.|.+++|+|++..++....++.++.|.-. ....+..+...+.+++|+|++++++++..++.|.+||..+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~ 78 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTITAE--------PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI 78 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEEECE--------EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE
T ss_pred ccceeeecCCccceeEEeecccCcccccc--------eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcE
Confidence 57788999988777777778888888221 1233344556678999999999888888899999999987765
Q ss_pred eEEeccCCCcEEEEEecCCCCEEEEeeCC----CeEEEEeCCCCCceeEEe-----cCCeEEEEecCCCEEEEEcC----
Q 039044 82 PVTVAMHDAPIKEVAWIPEMNLLATGSWD----KTLKYWDTRQPNPVHTQQ-----LPDRCYALTVRYPLMVVGTA---- 148 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~vwd~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~---- 148 (194)
......+...+.+++++|+++++++...+ +.|.+||..+++...... .....+.++|+++.+++...
T Consensus 79 ~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~ 158 (333)
T 2dg1_A 79 KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYST 158 (333)
T ss_dssp EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTT
T ss_pred EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecccccc
Confidence 54443566789999999999888777666 689999988776543322 12357889999987776654
Q ss_pred --CCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 149 --DRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 149 --dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
.+.|..+|..+.+.. .... ....+..++|+|+|+.++++
T Consensus 159 ~~~~~l~~~~~~~~~~~--~~~~-~~~~~~~i~~~~dg~~l~v~ 199 (333)
T 2dg1_A 159 NPLGGVYYVSPDFRTVT--PIIQ-NISVANGIALSTDEKVLWVT 199 (333)
T ss_dssp BCCEEEEEECTTSCCEE--EEEE-EESSEEEEEECTTSSEEEEE
T ss_pred CCCceEEEEeCCCCEEE--Eeec-CCCcccceEECCCCCEEEEE
Confidence 355677776554322 2211 12346889999999866554
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.66 E-value=1.6e-13 Score=94.14 Aligned_cols=181 Identities=9% Similarity=0.027 Sum_probs=134.4
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccC-CCCCeeEEEEecCCCeEEEecC-CCeEEEEecCCC
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASIS-HDHPVLCSTWKDDGTTVFSGGC-DKQVKMWPLLSG 79 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~ 79 (194)
.++++++.|+|+++++ .++.|..||. +++. ...... ....+.++.+.++|+.+++.+. ++.+..+|. ++
T Consensus 38 ~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~-----~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~G 108 (276)
T 3no2_A 38 ECNSVAATKAGEILFS--YSKGAKMITR-DGRE-----LWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KG 108 (276)
T ss_dssp CCCEEEECTTSCEEEE--CBSEEEEECT-TSCE-----EEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TS
T ss_pred CCcCeEECCCCCEEEe--CCCCEEEECC-CCCE-----EEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CC
Confidence 4678999999998883 4678999998 4432 222222 2346888999999999999877 778888885 66
Q ss_pred CceEEec------cCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecC--CeEEEEecCCCEEEEEcCCCc
Q 039044 80 GQPVTVA------MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP--DRCYALTVRYPLMVVGTADRN 151 (194)
Q Consensus 80 ~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~dg~ 151 (194)
+.+..+. .+......+++.++|+++++...++.|..||.. ++.+.++..+ .......++++.++++..++.
T Consensus 109 k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 187 (276)
T 3no2_A 109 EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHC 187 (276)
T ss_dssp CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSE
T ss_pred CEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCe
Confidence 7666553 122345566788999999999999999999998 8888877653 446677889999999988889
Q ss_pred EEEEECCCCCeeeEEeeCC----CcceeeEEEEecCCCeeEEEEe
Q 039044 152 LVVFNLQNPQTEFKRINSP----LKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 152 v~~~d~~~~~~~~~~~~~~----~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
|..+|..+++......... .-..+..+...++|..+++..+
T Consensus 188 v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~ 232 (276)
T 3no2_A 188 FVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQ 232 (276)
T ss_dssp EEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEEC
T ss_pred EEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEecc
Confidence 9999999887655443211 1123678888999999888753
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.65 E-value=6.2e-14 Score=98.49 Aligned_cols=185 Identities=5% Similarity=-0.101 Sum_probs=122.5
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEec-CCCeEEEEecCCCC
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGG-CDKQVKMWPLLSGG 80 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~ 80 (194)
....++++|+++.+++...++.|.+||..+.............+.......+++ .+++.+++.. .++.|.++|..+++
T Consensus 85 ~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~ 163 (328)
T 3dsm_A 85 SPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDK 163 (328)
T ss_dssp SEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTE
T ss_pred CCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCe
Confidence 356788988885444444789999999887642100000000011114556777 3444444433 48899999999988
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEeeCC----------CeEEEEeCCCCCceeEEec----CCeEEEEecCCCEEEEE
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGSWD----------KTLKYWDTRQPNPVHTQQL----PDRCYALTVRYPLMVVG 146 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~v~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~ 146 (194)
.+..+.. ......++++|+|++++++..+ +.|.++|..+++....+.. ....++++|+++.++++
T Consensus 164 ~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~ 242 (328)
T 3dsm_A 164 VVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWI 242 (328)
T ss_dssp EEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEE
T ss_pred EEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEE
Confidence 7777654 3345789999999977776554 7899999998887766654 35789999999998887
Q ss_pred cCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 147 TADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 147 ~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
.. .|.+||..+.+................++++|++..+.++
T Consensus 243 ~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva 284 (328)
T 3dsm_A 243 NN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVA 284 (328)
T ss_dssp SS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEE
T ss_pred cc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEE
Confidence 65 8999999876632111111113567899999955444444
No 188
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.65 E-value=3.2e-14 Score=101.21 Aligned_cols=107 Identities=8% Similarity=0.059 Sum_probs=78.3
Q ss_pred CCCEEEEee------CCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEec----------CCCeEEEE
Q 039044 11 KANILVATS------WDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGG----------CDKQVKMW 74 (194)
Q Consensus 11 ~~~~l~~~~------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~d~~i~~~ 74 (194)
+++++++.. .|+.|.+||..+++. .........+ .++|+|++++++++. .++.|.+|
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~-----~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~ 86 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKF-----LGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVW 86 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCE-----EEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEE
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeE-----EEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEE
Confidence 566666654 367999999877642 2233333344 899999999999886 36779999
Q ss_pred ecCCCCceEEeccC------CCcEEEEEecCCCCEEEEeeC--CCeEEEEeCCCCCce
Q 039044 75 PLLSGGQPVTVAMH------DAPIKEVAWIPEMNLLATGSW--DKTLKYWDTRQPNPV 124 (194)
Q Consensus 75 d~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--d~~v~vwd~~~~~~~ 124 (194)
|..+.+.+.++... ......++++|+|++|+++.. ++.|.+||+.+.+.+
T Consensus 87 d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~ 144 (361)
T 2oiz_A 87 DADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYV 144 (361)
T ss_dssp ETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEE
T ss_pred ECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEE
Confidence 99988887776532 245678999999999998864 578999998765443
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.64 E-value=2.1e-13 Score=92.85 Aligned_cols=180 Identities=10% Similarity=-0.031 Sum_probs=123.2
Q ss_pred CeeeEEEcCCCCEEE-EeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 2 SVSSLCFSPKANILV-ATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
...+++++|++++++ +...++.|..|+...... ..........+.+++++++++.+++.. ++.|.+||.....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT-----TVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC----------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCccc-----ceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCce
Confidence 457899999998777 546788999998755432 111122334678899999998666666 8899999986654
Q ss_pred ceEEec-cCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEe---cCCeEEEEecCCCEEEEEcCCCcEEEEE
Q 039044 81 QPVTVA-MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ---LPDRCYALTVRYPLMVVGTADRNLVVFN 156 (194)
Q Consensus 81 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~dg~v~~~d 156 (194)
. ..+. .....+..+++.++|+++++...++.|.+|+..+........ .....++++++++.+++...++.|.+||
T Consensus 99 ~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 99 Q-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 177 (270)
T ss_dssp C-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEEC
T ss_pred E-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEe
Confidence 3 3332 233678999999999987777778899999876554332211 1346789999998777777788999999
Q ss_pred CCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 157 LQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
........ ........+..++++|+|..+++.
T Consensus 178 ~~~~~~~~--~~~~~~~~p~~i~~d~~g~l~v~~ 209 (270)
T 1rwi_B 178 AESNNQVV--LPFTDITAPWGIAVDEAGTVYVTE 209 (270)
T ss_dssp TTTCCEEE--CCCSSCCSEEEEEECTTCCEEEEE
T ss_pred cCCCceEe--ecccCCCCceEEEECCCCCEEEEE
Confidence 88755321 112222567899999999666554
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.64 E-value=7.2e-14 Score=98.52 Aligned_cols=168 Identities=10% Similarity=0.070 Sum_probs=111.3
Q ss_pred eeeEEEcCCCCEEEEee---------CCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCC---C-
Q 039044 3 VSSLCFSPKANILVATS---------WDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCD---K- 69 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~---------~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---~- 69 (194)
+...++ ||+.++... .++.|.+|++..+.. ..+ ..+..+.|+|||++|+..+.+ +
T Consensus 17 ~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~------~~l----~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 17 LSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNAR------RFI----ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp EEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE------EEE----ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred cccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCce------EEc----ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 456677 888777542 256788999877642 112 567889999999999877654 3
Q ss_pred -eEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCC---------------------------CeEEEEeCCCC
Q 039044 70 -QVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWD---------------------------KTLKYWDTRQP 121 (194)
Q Consensus 70 -~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------~~v~vwd~~~~ 121 (194)
.|.+|++.+++...... +.. +..++|+|+|+.|+.++.+ ..|.+||+.++
T Consensus 85 ~~l~~~~~~~g~~~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 162 (347)
T 2gop_A 85 SEIWVADLETLSSKKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE 162 (347)
T ss_dssp EEEEEEETTTTEEEEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT
T ss_pred ceEEEEECCCCceEEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC
Confidence 47788887766544433 334 9999999999998887642 57999999887
Q ss_pred CceeEEec-CCeEEEEecCCCEEEEEcCCC-------cEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 122 NPVHTQQL-PDRCYALTVRYPLMVVGTADR-------NLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 122 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~dg-------~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
+.+..+.. ....+.++|++ .++++..++ ...+|.+.+++ ...+.. + ..+..+ +|+|+.|+...
T Consensus 163 ~~~~~l~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~--~~~l~~-~-~~~~~~--spdg~~l~~~~ 233 (347)
T 2gop_A 163 EVIEEFEKPRFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK--EEKMFE-K-VSFYAV--DSDGERILLYG 233 (347)
T ss_dssp EEEEEEEEETTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE--EEEEEE-E-ESEEEE--EECSSCEEEEE
T ss_pred eEEeeecCCCcccccCCCCe-EEEEEecccccccccccccEEEeCCCc--eEEecc-C-cceeeE--CCCCCEEEEEE
Confidence 65222221 56788999999 777775542 33444443332 222222 2 334443 99999988765
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.63 E-value=2.8e-13 Score=104.25 Aligned_cols=185 Identities=10% Similarity=-0.038 Sum_probs=125.1
Q ss_pred eeeEEEcCCCCEEEEeeCCCe----------------EEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEec
Q 039044 3 VSSLCFSPKANILVATSWDNQ----------------VRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGG 66 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~----------------i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 66 (194)
+..++|+||++.|+.++.++. |++|++.++.... ........+...+..+.|+|||++|+..+
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~-~~v~~~~~~~~~~~~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSED-ILCAEFPDEPKWMGGAELSDDGRYVLLSI 251 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC-EEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccc-eEEeccCCCCeEEEEEEEcCCCCEEEEEE
Confidence 457999999999998887765 9999997654200 01111222455678999999999988776
Q ss_pred C-----CCeEEEEecCC------CC-ceEEeccCCCcEEEEEecCCCCEEEEeeCC----CeEEEEeCCCCCc--eeEEe
Q 039044 67 C-----DKQVKMWPLLS------GG-QPVTVAMHDAPIKEVAWIPEMNLLATGSWD----KTLKYWDTRQPNP--VHTQQ 128 (194)
Q Consensus 67 ~-----d~~i~~~d~~~------~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~vwd~~~~~~--~~~~~ 128 (194)
. +..|.+||+.+ +. ....+..+...+.. .|+|+|+.|+..+.. ..|.+||+.+++. ...+.
T Consensus 252 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 252 REGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp ECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred EccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence 4 57899999986 43 45566666665554 488888887766553 3699999987652 22222
Q ss_pred cC-----CeEEEEecCCCEEEEEcCCCc--EEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 129 LP-----DRCYALTVRYPLMVVGTADRN--LVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 129 ~~-----~~~~~~~~~~~~l~~~~~dg~--v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
.+ ...+.+++++..+++...++. |++||+.+++. ...+.. +...+..+.++|+++.++...
T Consensus 331 ~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~-~~~l~~-~~~~v~~~~~s~d~~~l~~~~ 398 (710)
T 2xdw_A 331 PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGAL-LKIFPL-EVGSVVGYSGQKKDTEIFYQF 398 (710)
T ss_dssp CCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCE-EEEECC-CSSEEEEEECCTTCSEEEEEE
T ss_pred CCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCE-EEecCC-CCceEEEEecCCCCCEEEEEE
Confidence 11 234667767777788888875 66678755552 233333 366788999999998777553
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.63 E-value=4.4e-13 Score=100.32 Aligned_cols=174 Identities=11% Similarity=0.036 Sum_probs=126.1
Q ss_pred CCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecC--CCCceEEeccC
Q 039044 11 KANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLL--SGGQPVTVAMH 88 (194)
Q Consensus 11 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~--~~~~~~~~~~~ 88 (194)
.+.++++...+++|.++|..+.+. ...+ .....+..+.++||++++++++.++.|.+||+. +++.+.++...
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v-----~~~i-~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G 239 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEI-----KTVL-DTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG 239 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCE-----EEEE-ECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC
T ss_pred CceEEEEeCCCCeEEEEECCCCeE-----EEEE-eCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC
Confidence 345666777789999999987742 2222 233456689999999999999999999999995 77777777643
Q ss_pred CCcEEEEEec----CCCCEEEEeeC-CCeEEEEeCCCCCceeEEecC--------------CeEEEEecCCC-EEEEEcC
Q 039044 89 DAPIKEVAWI----PEMNLLATGSW-DKTLKYWDTRQPNPVHTQQLP--------------DRCYALTVRYP-LMVVGTA 148 (194)
Q Consensus 89 ~~~v~~~~~~----~~~~~l~~~~~-d~~v~vwd~~~~~~~~~~~~~--------------~~~~~~~~~~~-~l~~~~~ 148 (194)
.....++|+ |+|+++++++. ++++.++|..+.+++..+... ...+..++++. +++....
T Consensus 240 -~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 240 -SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE 318 (567)
T ss_dssp -SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred -CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC
Confidence 346799999 69998887765 589999999999888766532 12455566654 4555667
Q ss_pred CCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 149 DRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 149 dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
.|.|.++|........... .........+.|+|+|++++++..
T Consensus 319 ~g~v~~vd~~~~~~~~v~~-i~~~~~~~d~~~~pdgr~~~va~~ 361 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTE-ISAERFLHDGGLDGSHRYFITAAN 361 (567)
T ss_dssp TTEEEEEETTCSSEEEEEE-EECCSSEEEEEECTTSCEEEEEEG
T ss_pred CCeEEEEecCCCccceeee-eeccccccCceECCCCCEEEEEeC
Confidence 8999999998765322211 122345678899999999988764
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.61 E-value=5.1e-13 Score=93.83 Aligned_cols=177 Identities=7% Similarity=-0.017 Sum_probs=123.1
Q ss_pred eeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCceE
Q 039044 4 SSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPV 83 (194)
Q Consensus 4 ~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 83 (194)
..+.+. +++++++...++.|.+||..+.+. .... ........++++++++.+++...++.|.+||..+++...
T Consensus 47 ~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~-----~~~i-~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~ 119 (328)
T 3dsm_A 47 QSMVIR-DGIGWIVVNNSHVIFAIDINTFKE-----VGRI-TGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITG 119 (328)
T ss_dssp EEEEEE-TTEEEEEEGGGTEEEEEETTTCCE-----EEEE-ECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEE
T ss_pred eEEEEE-CCEEEEEEcCCCEEEEEECcccEE-----EEEc-CCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEE
Confidence 456664 345556666678999999987753 1222 234668899999998544444489999999999887766
Q ss_pred EeccCC-----CcEEEEEecCCCCEEEEee--CCCeEEEEeCCCCCceeEEecC--CeEEEEecCCCEEEEEcCC-----
Q 039044 84 TVAMHD-----APIKEVAWIPEMNLLATGS--WDKTLKYWDTRQPNPVHTQQLP--DRCYALTVRYPLMVVGTAD----- 149 (194)
Q Consensus 84 ~~~~~~-----~~v~~~~~~~~~~~l~~~~--~d~~v~vwd~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~d----- 149 (194)
.+.... .....+++ .+ ..++++. .++.|.++|+.+++.+..+... ...+.+++++++++++..+
T Consensus 120 ~i~~g~~~~~~~~p~~i~~-~~-~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 120 YIECPDMDMESGSTEQMVQ-YG-KYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSP 197 (328)
T ss_dssp EEECTTCCTTTCBCCCEEE-ET-TEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCS
T ss_pred EEEcCCccccCCCcceEEE-EC-CEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCc
Confidence 655322 14567777 34 4444444 4889999999998877776543 3578889999877766654
Q ss_pred -----CcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 150 -----RNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 150 -----g~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
+.|.++|..+.+.. .....+.......++|+|+++.+.++
T Consensus 198 ~~~~~~~v~~id~~t~~v~-~~~~~~~g~~p~~la~~~d~~~lyv~ 242 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTVE-KQFKFKLGDWPSEVQLNGTRDTLYWI 242 (328)
T ss_dssp SCBCCCEEEEEETTTTEEE-EEEECCTTCCCEEEEECTTSCEEEEE
T ss_pred cccCCceEEEEECCCCeEE-EEEecCCCCCceeEEEecCCCEEEEE
Confidence 78999999887632 23332223467999999999888764
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.60 E-value=3.4e-13 Score=104.25 Aligned_cols=181 Identities=11% Similarity=0.047 Sum_probs=116.6
Q ss_pred CeeeEEEcCCCCEEEEeeCC-----CeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCe------
Q 039044 2 SVSSLCFSPKANILVATSWD-----NQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQ------ 70 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~------ 70 (194)
.+..++|+|||++|+.+..+ ..|++||+.+++. .. ...+...+..++|+|| +.|+.+..++.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~-----~~-~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~ 236 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP-----LA-DELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAF 236 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE-----EE-EEEEEEESCCCEESTT-SEEEEEECCCC------
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC-----CC-ccCCCceeccEEEECC-CEEEEEEecCccccccc
Confidence 35688999999999877653 4699999988753 11 1111122357899999 88887776543
Q ss_pred --------EEEEecCCCCc--eEEec--cCCCcEEEEEecCCCCEEEEeeCCC-----eEEEEeCCCC--CceeEEecC-
Q 039044 71 --------VKMWPLLSGGQ--PVTVA--MHDAPIKEVAWIPEMNLLATGSWDK-----TLKYWDTRQP--NPVHTQQLP- 130 (194)
Q Consensus 71 --------i~~~d~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~vwd~~~~--~~~~~~~~~- 130 (194)
|++|++.++.. ...+. .+...+..+.|+|+|++|+..+.++ .|.+||+.++ +....+...
T Consensus 237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 316 (741)
T 1yr2_A 237 QALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL 316 (741)
T ss_dssp --CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS
T ss_pred ccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC
Confidence 88999877653 22232 2334588999999999988777544 8999999876 413333221
Q ss_pred -CeEEEEecCCCEEEEEcCC----CcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 131 -DRCYALTVRYPLMVVGTAD----RNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 131 -~~~~~~~~~~~~l~~~~~d----g~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
.....++++++.|+..+.+ +.|.+||+.++......+...+...+..+.++ ++..+++.
T Consensus 317 ~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~ 380 (741)
T 1yr2_A 317 KAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASY 380 (741)
T ss_dssp SSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEE
T ss_pred CceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEE
Confidence 1223356889888877653 45999999875211233334444556677776 44444443
No 195
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.58 E-value=8.7e-12 Score=85.88 Aligned_cols=179 Identities=11% Similarity=0.047 Sum_probs=126.5
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.+.++++.|+++++++...++.|..|+.. +.. ...........+..++++++++.+++...++.|..|+.. ++
T Consensus 16 ~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~----~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~- 88 (299)
T 2z2n_A 16 GPYGITVSDKGKVWITQHKANMISCINLD-GKI----TEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI- 88 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-CCE----EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-
T ss_pred CccceEECCCCCEEEEecCCCcEEEEcCC-CCe----EEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc-
Confidence 47899999999988777668899999987 432 111112244678999999999988887778899999976 33
Q ss_pred eEEec--cCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEE-e---cCCeEEEEecCCCEEEEEcCCCcEEEE
Q 039044 82 PVTVA--MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQ-Q---LPDRCYALTVRYPLMVVGTADRNLVVF 155 (194)
Q Consensus 82 ~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~-~---~~~~~~~~~~~~~~l~~~~~dg~v~~~ 155 (194)
...+. .....+..+++.++++++++...++.|..||. +++..... . .....+++++++...++...++.|..|
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 167 (299)
T 2z2n_A 89 IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRI 167 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEE
Confidence 23332 24557899999999988887777889999998 44433221 1 123578888999887777778889999
Q ss_pred ECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 156 NLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 156 d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
|. +++... .........+..++++|+|..+++.
T Consensus 168 ~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~ 200 (299)
T 2z2n_A 168 TE-SGDITE-FKIPTPASGPVGITKGNDDALWFVE 200 (299)
T ss_dssp CT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEE
T ss_pred cC-CCcEEE-eeCCCCCCcceeEEECCCCCEEEEc
Confidence 98 544322 1122233457899999998866654
No 196
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.57 E-value=6.2e-12 Score=94.19 Aligned_cols=181 Identities=11% Similarity=-0.014 Sum_probs=123.8
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecc--cCCcccccccccccCCCCCeeEEEEe----cCCCeEEEecC-CCeEEEE
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEIS--RGGTGVASVPKASISHDHPVLCSTWK----DDGTTVFSGGC-DKQVKMW 74 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~l~~~~~-d~~i~~~ 74 (194)
.+..+.++||++++++++.|+.|.+||+. +... ..... .......++|+ |||++++++.. ++.|.++
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~-----v~~i~-~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~Vi 271 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT-----VAEIK-IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIM 271 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCE-----EEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEE
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcE-----eEEEe-cCCCCceeEEccccCCCCCEEEEEEccCCeEEEE
Confidence 35689999999999999999999999985 3321 22222 23346789999 69998887765 5899999
Q ss_pred ecCCCCceEEecc----------C-CCcEEEEEecCCCCE-EEEeeCCCeEEEEeCCCCCceeE--Eec--CCeEEEEec
Q 039044 75 PLLSGGQPVTVAM----------H-DAPIKEVAWIPEMNL-LATGSWDKTLKYWDTRQPNPVHT--QQL--PDRCYALTV 138 (194)
Q Consensus 75 d~~~~~~~~~~~~----------~-~~~v~~~~~~~~~~~-l~~~~~d~~v~vwd~~~~~~~~~--~~~--~~~~~~~~~ 138 (194)
|..+.+.+..+.. | ...+..+..++++.. ++....+|.|.++|....+.+.. +.. ......|+|
T Consensus 272 D~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~p 351 (567)
T 1qks_A 272 DGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDG 351 (567)
T ss_dssp ETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECT
T ss_pred ECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECC
Confidence 9999888776542 1 126778888887554 44555679999999987653322 222 234678999
Q ss_pred CCCEEEEEc-CCCcEEEEECCCCCeeeEEeeC----CCcceeeEEE-EecCCCeeEEEE
Q 039044 139 RYPLMVVGT-ADRNLVVFNLQNPQTEFKRINS----PLKYQTRCVA-AFPDQQGFLVCI 191 (194)
Q Consensus 139 ~~~~l~~~~-~dg~v~~~d~~~~~~~~~~~~~----~~~~~v~~i~-~~p~~~~l~~~~ 191 (194)
++++++++. .++.|.++|+.+++.. ..... +|.+ +.+. ++|++..+.+..
T Consensus 352 dgr~~~va~~~sn~V~ViD~~t~kl~-~~i~vgg~~Phpg--~g~~~~~p~~g~v~~t~ 407 (567)
T 1qks_A 352 SHRYFITAANARNKLVVIDTKEGKLV-AIEDTGGQTPHPG--RGANFVHPTFGPVWATS 407 (567)
T ss_dssp TSCEEEEEEGGGTEEEEEETTTTEEE-EEEECSSSSBCCT--TCEEEEETTTEEEEEEE
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEE-EEEeccCcCCCCc--cceeeECCCCCcEEEeC
Confidence 999887765 5788999999987643 22222 2322 2333 578755554433
No 197
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.57 E-value=1.1e-12 Score=100.75 Aligned_cols=183 Identities=10% Similarity=-0.043 Sum_probs=119.8
Q ss_pred eeEEEcCCCCEEEEeeCCCe-------------EEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCC-
Q 039044 4 SSLCFSPKANILVATSWDNQ-------------VRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDK- 69 (194)
Q Consensus 4 ~~~~~~p~~~~l~~~~~d~~-------------i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~- 69 (194)
..++|+||++.|+.++.|.. |++|++.++.... ........+...+..+.|+|||++|+.++.++
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~-~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 249 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD-TVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW 249 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC-EEEECCCCCTTCEEEEEECTTSCCEEEEEEETT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc-eEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC
Confidence 57899999999999888765 9999998764210 11122223456788999999999998877665
Q ss_pred ---eEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEee---CCCeEEEEeCCCCCc---eeEEecC----CeEEEE
Q 039044 70 ---QVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGS---WDKTLKYWDTRQPNP---VHTQQLP----DRCYAL 136 (194)
Q Consensus 70 ---~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~v~vwd~~~~~~---~~~~~~~----~~~~~~ 136 (194)
.|.+++..+++ ...+..+...+....+ +++.+++... .++.|.+||+.+++. ....... ...+++
T Consensus 250 ~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~ 327 (695)
T 2bkl_A 250 SENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSI 327 (695)
T ss_dssp TEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEE
T ss_pred CceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEE
Confidence 67777665543 4455556666666666 5666444443 257899999987653 2222221 234555
Q ss_pred ecCCCEEEEEcCCCcEEEEECC-CCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 137 TVRYPLMVVGTADRNLVVFNLQ-NPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 137 ~~~~~~l~~~~~dg~v~~~d~~-~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
+ ++..+++...|+..++|.+. +++ ....+..+....+..+.++|+++.++...
T Consensus 328 ~-~~~lv~~~~~dg~~~l~~~~~~g~-~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ 381 (695)
T 2bkl_A 328 V-GGHLSLEYLKDATSEVRVATLKGK-PVRTVQLPGVGAASNLMGLEDLDDAYYVF 381 (695)
T ss_dssp E-TTEEEEEEEETTEEEEEEEETTCC-EEEECCCSSSSEECCCBSCTTCSEEEEEE
T ss_pred E-CCEEEEEEEECCEEEEEEEeCCCC-eeEEecCCCCeEEEEeecCCCCCEEEEEE
Confidence 5 66677888889887777554 233 22333333356788899999998877554
No 198
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.57 E-value=5.5e-12 Score=87.33 Aligned_cols=186 Identities=8% Similarity=0.018 Sum_probs=119.2
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCC---------CeEE
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCD---------KQVK 72 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---------~~i~ 72 (194)
.+.+++++|+++++++ . ++.|.+||..++........ ........+..++++|+|+++++.... ..-.
T Consensus 55 ~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~-~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~ 131 (297)
T 3g4e_A 55 PVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATV-DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGA 131 (297)
T ss_dssp CEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEEC-CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEE
T ss_pred ceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEec-CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcE
Confidence 4788999999995554 4 56799999876532100000 001123457889999999977654321 2345
Q ss_pred EEecCCCCceEEeccCCCcEEEEEecCCCCEEE-EeeCCCeEEEEeC--CCCCce-----eEEe---cCCeEEEEecCCC
Q 039044 73 MWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLA-TGSWDKTLKYWDT--RQPNPV-----HTQQ---LPDRCYALTVRYP 141 (194)
Q Consensus 73 ~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~v~vwd~--~~~~~~-----~~~~---~~~~~~~~~~~~~ 141 (194)
+|.+........+..+....+.++|+|+++.|+ +.+.++.|.+||+ .++... ..+. .....++++++|+
T Consensus 132 l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~ 211 (297)
T 3g4e_A 132 LYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK 211 (297)
T ss_dssp EEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC
T ss_pred EEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC
Confidence 555543333333333445678999999998664 4556789999987 444432 1111 1235788999998
Q ss_pred EEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEe-cCCCeeEEEEe
Q 039044 142 LMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAF-PDQQGFLVCIH 192 (194)
Q Consensus 142 ~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~-p~~~~l~~~~~ 192 (194)
..++...++.|..||..+++.. ..+.. ....+++++|. |+++.|.+++.
T Consensus 212 lwva~~~~~~v~~~d~~tG~~~-~~i~~-p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 212 LWVACYNGGRVIRLDPVTGKRL-QTVKL-PVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEEETTTEEEEECTTTCCEE-EEEEC-SSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEEEcCCCEEEEEcCCCceEE-EEEEC-CCCCceEEEEeCCCCCEEEEEcC
Confidence 7777777888999999876642 33332 23568999998 89888877654
No 199
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.56 E-value=1.8e-11 Score=84.36 Aligned_cols=180 Identities=8% Similarity=-0.074 Sum_probs=126.2
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.+.++++++++.++++...++.|..|+.... . ...........+..+++.++++.+++...++.|..||. +++.
T Consensus 58 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~----~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~ 131 (299)
T 2z2n_A 58 KVMCLTISSDGEVWFTENAANKIGRITKKGI-I----KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI 131 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTSC-E----EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred ceeeEEECCCCCEEEeCCCCCeEEEECCCCc-E----EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE
Confidence 4678999999998888777888999987522 1 11111124457889999999988888877889999998 5443
Q ss_pred eEE-eccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeE-Ee---cCCeEEEEecCCCEEEEEcCCCcEEEEE
Q 039044 82 PVT-VAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT-QQ---LPDRCYALTVRYPLMVVGTADRNLVVFN 156 (194)
Q Consensus 82 ~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~-~~---~~~~~~~~~~~~~~l~~~~~dg~v~~~d 156 (194)
... .......+..+++.++++++++...++.|..||. +++.... .. .....+++++++...++...++.|..||
T Consensus 132 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 210 (299)
T 2z2n_A 132 REYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRIT 210 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEEC
Confidence 322 2334567899999999988777767789999998 5554332 11 1235788889988777766788899999
Q ss_pred CCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 157 LQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
. +++... .........+.+++++|+|+.+++.
T Consensus 211 ~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 211 T-SGEITE-FKIPTPNARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp T-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEE
T ss_pred C-CCcEEE-EECCCCCCCceeEEECCCCCEEEec
Confidence 9 554322 1122234568899999999866653
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.52 E-value=1.2e-11 Score=85.93 Aligned_cols=182 Identities=12% Similarity=0.031 Sum_probs=118.2
Q ss_pred CeeeEEEcCC-CCEEEEeeCCCeEEEEecccCCcccccc-cccc-cCCCCCeeEEEEecCCCeEEEecCC----------
Q 039044 2 SVSSLCFSPK-ANILVATSWDNQVRCWEISRGGTGVASV-PKAS-ISHDHPVLCSTWKDDGTTVFSGGCD---------- 68 (194)
Q Consensus 2 ~v~~~~~~p~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~-~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d---------- 68 (194)
.+.+++++|+ ++++++.. ...|.+|+.. +... .. .... ......+.+++++++++++++...+
T Consensus 72 ~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~--~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~ 147 (314)
T 1pjx_A 72 IPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFE--EIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRS 147 (314)
T ss_dssp CEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEE--ECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBT
T ss_pred CCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEE--EEEeccCCCccccCCcCEEECCCCCEEEEecCccccccccccc
Confidence 4678999999 66555544 4478889987 4321 01 0000 1122457899999999888777655
Q ss_pred -----CeEEEEecCCCCceEEeccCCCcEEEEEec----CCCCEEEEe-eCCCeEEEEeCC-CCCc-----eeEEe----
Q 039044 69 -----KQVKMWPLLSGGQPVTVAMHDAPIKEVAWI----PEMNLLATG-SWDKTLKYWDTR-QPNP-----VHTQQ---- 128 (194)
Q Consensus 69 -----~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~d~~v~vwd~~-~~~~-----~~~~~---- 128 (194)
+.|..++.. ++. ..+..+......++|+ |+++.++.+ ..++.|.+||+. .++. ...+.
T Consensus 148 ~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (314)
T 1pjx_A 148 MQEKFGSIYCFTTD-GQM-IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHE 225 (314)
T ss_dssp TSSSCEEEEEECTT-SCE-EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSS
T ss_pred ccCCCCeEEEECCC-CCE-EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCC
Confidence 567777765 443 3333334457889999 998765554 567899999976 3331 12222
Q ss_pred cCCeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 129 LPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 129 ~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
.....++++++++..++...++.|.+||.++++.. ..... +...+.+++|+|+++.|.++.
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~-~~~~~-~~~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPK-MRIRC-PFEKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCS-EEEEC-SSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEe-EEEeC-CCCCceeEEECCCCCEEEEEe
Confidence 22356788999988888777889999998855432 22222 335689999999999666554
No 201
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.52 E-value=4.6e-13 Score=95.37 Aligned_cols=127 Identities=11% Similarity=0.106 Sum_probs=97.0
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCce
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQP 82 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 82 (194)
|+.++| ++..|+++ .++.|++||+..... ......+..++.++.+.+. .++++..||.+.+||+.++...
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~-----~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~ 159 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELSE-----FRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK 159 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTTC-----EEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhhc-----cCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc
Confidence 788999 88999998 789999999987642 2233455667888877654 3888899999999999877654
Q ss_pred EEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc--eeEE------------ecCCeEEEEecCCCEEEE
Q 039044 83 VTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP--VHTQ------------QLPDRCYALTVRYPLMVV 145 (194)
Q Consensus 83 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~--~~~~------------~~~~~~~~~~~~~~~l~~ 145 (194)
. +...|++++|+|+| ++.+..||++++|+....+. ..++ ......+.|.+++.++++
T Consensus 160 ~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 160 Q----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp E----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred c----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 3 44689999999999 67788899999998877664 4444 122356777778877776
No 202
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.51 E-value=2e-11 Score=86.22 Aligned_cols=190 Identities=9% Similarity=-0.018 Sum_probs=122.6
Q ss_pred CeeeEEEcCCCCEEEEeeC-----CCeEEEEecccCCcc-cccccccccCCCCCeeEEEEecCCCeE-EEec---CCCeE
Q 039044 2 SVSSLCFSPKANILVATSW-----DNQVRCWEISRGGTG-VASVPKASISHDHPVLCSTWKDDGTTV-FSGG---CDKQV 71 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~-----d~~i~i~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~---~d~~i 71 (194)
.+..++++|+++++++-.. +..|.+||+.++... ..........+...+..+++++++..+ ++-. .++.|
T Consensus 68 ~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i 147 (343)
T 2qe8_A 68 TVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAAL 147 (343)
T ss_dssp CEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEE
T ss_pred EeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeE
Confidence 4788999999887665443 578999998866421 111111111233457899999865554 4444 57899
Q ss_pred EEEecCCCCceEEeccCC-----------------------------CcEEEEEecCCCCEEEEeeCCC-eEEEEeCC--
Q 039044 72 KMWPLLSGGQPVTVAMHD-----------------------------APIKEVAWIPEMNLLATGSWDK-TLKYWDTR-- 119 (194)
Q Consensus 72 ~~~d~~~~~~~~~~~~~~-----------------------------~~v~~~~~~~~~~~l~~~~~d~-~v~vwd~~-- 119 (194)
.+||+.+++..+.+..|. ..+..++|+|+++.|+.+..++ .+..++..
T Consensus 148 ~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~ 227 (343)
T 2qe8_A 148 IRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADL 227 (343)
T ss_dssp EEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHH
T ss_pred EEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHh
Confidence 999998776554443221 2368899999999888877655 55555532
Q ss_pred -CCC--------ceeE--EecCCeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeE
Q 039044 120 -QPN--------PVHT--QQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFL 188 (194)
Q Consensus 120 -~~~--------~~~~--~~~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~ 188 (194)
.+. .+.. .......+++++++..+++...++.|.+||..+++.. .....+....+.+++|.|+++.++
T Consensus 228 ~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~-~~~~~~~~~~p~~va~~~~g~l~v 306 (343)
T 2qe8_A 228 SNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYK-LLVTDEKLSWTDSFNFGSDGYLYF 306 (343)
T ss_dssp TCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEE-EEEECGGGSCEEEEEECTTSCEEE
T ss_pred cCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEE-EEEECCceecCCeeEECCCCcEEE
Confidence 111 0111 1123457899999999999888999999998444422 112222234578999999998887
Q ss_pred EEEe
Q 039044 189 VCIH 192 (194)
Q Consensus 189 ~~~~ 192 (194)
+...
T Consensus 307 ~~~~ 310 (343)
T 2qe8_A 307 DCNQ 310 (343)
T ss_dssp EECC
T ss_pred EeCc
Confidence 7653
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.50 E-value=2.6e-11 Score=87.58 Aligned_cols=181 Identities=12% Similarity=0.042 Sum_probs=120.2
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCC--eEEEEecCCC
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDK--QVKMWPLLSG 79 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~ 79 (194)
....++|+|+++++++...++.|+.||...+.. ...... ..... ++|+|+++.|+.+..++ .|.+++...+
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~-----~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKV-----TTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEE-----EEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEE-----EEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCC
Confidence 457899999999888877789999999876532 111112 22233 99999999998888766 7999998766
Q ss_pred CceEEe----ccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeE----Ee---cCC-e-EEEEecC-CCEEEE
Q 039044 80 GQPVTV----AMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT----QQ---LPD-R-CYALTVR-YPLMVV 145 (194)
Q Consensus 80 ~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~----~~---~~~-~-~~~~~~~-~~~l~~ 145 (194)
.....+ ......+.+++++|++..|+.+..++.|+.||..++..... .. ... . .++++|+ +..+++
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred ceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 554444 22456678999999544555566788999999987653222 11 111 2 8999995 555555
Q ss_pred EcCCCcEEEEECCCCCeeeEEee--CC---------CcceeeEEEEecCCCeeEE
Q 039044 146 GTADRNLVVFNLQNPQTEFKRIN--SP---------LKYQTRCVAAFPDQQGFLV 189 (194)
Q Consensus 146 ~~~dg~v~~~d~~~~~~~~~~~~--~~---------~~~~v~~i~~~p~~~~l~~ 189 (194)
-..++.|+.|+............ .+ .-.....++++|+|+.+++
T Consensus 285 d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva 339 (409)
T 3hrp_A 285 DQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV 339 (409)
T ss_dssp ETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE
T ss_pred eCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE
Confidence 66688899999875321111100 00 0123689999999986655
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.49 E-value=1.2e-10 Score=80.11 Aligned_cols=180 Identities=10% Similarity=-0.008 Sum_probs=125.6
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.+.++++.+++++.++...++.|.+|+.. +.. ...........+..+++.++++.+++...++.|..||.. ++.
T Consensus 21 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~----~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 21 GPYGITSSEDGKVWFTQHKANKISSLDQS-GRI----KEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCE----EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CcceeeECCCCCEEEEcCCCCeEEEECCC-Cce----EEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 46789999999988877778999999977 332 111122234678899999999988887778899999987 544
Q ss_pred eE-EeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeE-Ee---cCCeEEEEecCCCEEEEEcCCCcEEEEE
Q 039044 82 PV-TVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT-QQ---LPDRCYALTVRYPLMVVGTADRNLVVFN 156 (194)
Q Consensus 82 ~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~-~~---~~~~~~~~~~~~~~l~~~~~dg~v~~~d 156 (194)
.. ........+..+++.++++++++...++.|..+|.. ++.... .. .....++++++++..++...++.|..+|
T Consensus 95 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence 22 222234678999999999888777668899999987 544322 11 1235778889998766666678899999
Q ss_pred CCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 157 LQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
. +++... .........+..+++.++|..+++.
T Consensus 174 ~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 174 N-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVE 205 (300)
T ss_dssp T-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEE
T ss_pred C-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEc
Confidence 8 444222 1112233457899999998766653
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.48 E-value=2.5e-10 Score=78.62 Aligned_cols=179 Identities=11% Similarity=-0.019 Sum_probs=124.3
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.+.++++.++++++++...++.|..||.. +.. ...........+..+++.++++++++...++.|..++.. ++.
T Consensus 63 ~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~----~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 63 KVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF----TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCE----EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE
T ss_pred cceeEEECCCCCEEEEecCCCeEEEECCC-CCe----EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE
Confidence 46788999999888877767889999877 321 111122234568899999999988888778899999987 544
Q ss_pred eE-EeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec-----CCeEEEEecCCCEEEEEcCCCcEEEE
Q 039044 82 PV-TVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL-----PDRCYALTVRYPLMVVGTADRNLVVF 155 (194)
Q Consensus 82 ~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~dg~v~~~ 155 (194)
.. .+......+..+++.+++++.++...++.|..+|. +++... +.. ....+++++++...++....+.|.+|
T Consensus 137 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 214 (300)
T 2qc5_A 137 YEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRI 214 (300)
T ss_dssp EEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred EEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEE
Confidence 32 22334567899999999997766666789999998 454432 222 23577888888877776677789999
Q ss_pred ECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 156 NLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 156 d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
|. +++...... ......+.+++++|+|+.+++.
T Consensus 215 ~~-~g~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 215 TT-TGEISEYDI-PTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp CT-TCCEEEEEC-SSTTCCEEEEEECSTTCEEEEE
T ss_pred cC-CCcEEEEEC-CCCCCCceEEEECCCCCEEEec
Confidence 98 333222112 2234567899999999866554
No 206
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.47 E-value=5.3e-12 Score=97.01 Aligned_cols=179 Identities=16% Similarity=0.151 Sum_probs=114.2
Q ss_pred eeeEEEcCCCCEEEE-----eeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCC--------
Q 039044 3 VSSLCFSPKANILVA-----TSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDK-------- 69 (194)
Q Consensus 3 v~~~~~~p~~~~l~~-----~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-------- 69 (194)
+..++|+|||++||- |+....|++||+.+++. ..... .......++|+ |++.|+.+..+.
T Consensus 131 l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~----~~~~~--~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQP----LETPL--KDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp EEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSE----EEEEE--EEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred EEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCC----Ccccc--CCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 677899999998884 33346799999998753 11111 11113567899 999888887763
Q ss_pred -----eEEEEecCCCCc--eEEe--cc-CCCcEEEEEecCCCCEEEEeeC----CCeEEEEeCCCCC-ceeEEecC--Ce
Q 039044 70 -----QVKMWPLLSGGQ--PVTV--AM-HDAPIKEVAWIPEMNLLATGSW----DKTLKYWDTRQPN-PVHTQQLP--DR 132 (194)
Q Consensus 70 -----~i~~~d~~~~~~--~~~~--~~-~~~~v~~~~~~~~~~~l~~~~~----d~~v~vwd~~~~~-~~~~~~~~--~~ 132 (194)
.|++|++.++.. ...+ .. |......+.|+|+|++|+.... +..|+++|+.+++ ....+..+ ..
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 499999877653 2222 22 3445788999999998765432 3589999998764 23333322 12
Q ss_pred EEEEecCCCEEEEEcC-C---CcEEEEECCCCCe-eeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 133 CYALTVRYPLMVVGTA-D---RNLVVFNLQNPQT-EFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 133 ~~~~~~~~~~l~~~~~-d---g~v~~~d~~~~~~-~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
...+++++..++..+. + +.|..+|+.++.. ....+.. +...+. .|+|+++.|+...
T Consensus 284 ~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~-~~~~~~--~~s~~g~~lv~~~ 344 (693)
T 3iuj_A 284 VSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP-ERQQVL--TVHSGSGYLFAEY 344 (693)
T ss_dssp EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC-CCSSCE--EEEEETTEEEEEE
T ss_pred EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec-CCCCEE--EEEEECCEEEEEE
Confidence 2236777766555443 3 5799999987653 1222322 333333 8999999888764
No 207
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.47 E-value=1.6e-11 Score=87.24 Aligned_cols=146 Identities=12% Similarity=0.028 Sum_probs=109.3
Q ss_pred EEcCCCCEEEEeeC-----CCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEec----------CCCeE
Q 039044 7 CFSPKANILVATSW-----DNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGG----------CDKQV 71 (194)
Q Consensus 7 ~~~p~~~~l~~~~~-----d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~d~~i 71 (194)
...|+++.+++... ++.|.++|..+.+. .........+ . +.++||+++++.+. .++.|
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v-----~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~V 111 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRV-----IGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYV 111 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEE-----EEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeE-----EEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEE
Confidence 44688988888765 67899999887642 2222222334 4 99999999988775 36789
Q ss_pred EEEecCCCCceEEeccCC-------CcEEEEEecCCCCEEEEeeC--CCeEEEEeCCCCCceeEEecCCeEEEEecCCCE
Q 039044 72 KMWPLLSGGQPVTVAMHD-------APIKEVAWIPEMNLLATGSW--DKTLKYWDTRQPNPVHTQQLPDRCYALTVRYPL 142 (194)
Q Consensus 72 ~~~d~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~--d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (194)
.+||..+.+.+.++.... .....++|+|+|++++++.. ++.|.++|+.+.+.+.++..+.....+....+.
T Consensus 112 sviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~ 191 (386)
T 3sjl_D 112 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDT 191 (386)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTE
T ss_pred EEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCce
Confidence 999999998887764221 24567999999999888864 689999999999999988776543333334567
Q ss_pred EEEEcCCCcEEEEECCC
Q 039044 143 MVVGTADRNLVVFNLQN 159 (194)
Q Consensus 143 l~~~~~dg~v~~~d~~~ 159 (194)
+++.+.||.+.+.++..
T Consensus 192 ~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 192 FFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEEEETTSCEEEEECCS
T ss_pred eEEECCCCCEEEEECCC
Confidence 77888899999888876
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.46 E-value=5.3e-11 Score=92.11 Aligned_cols=183 Identities=12% Similarity=0.043 Sum_probs=115.9
Q ss_pred eeEEEcCCCCEEEEeeCCCe--------------EEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCC
Q 039044 4 SSLCFSPKANILVATSWDNQ--------------VRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDK 69 (194)
Q Consensus 4 ~~~~~~p~~~~l~~~~~d~~--------------i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~ 69 (194)
..++|+|| +.|+.++.++. |++|++.+..... ........+...+..+.|+|||++|+..+.++
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 289 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSAD-QPVFATPELPKRGHGASVSSDGRWVVITSSEG 289 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGC-EEEECCTTCTTCEEEEEECTTSCEEEEEEECT
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhC-EEEeccCCCCeEEEEEEECCCCCEEEEEEEcc
Confidence 57899999 88888876554 8888886653200 11111122333588999999999888776543
Q ss_pred -----eEEEEecCCC--CceEEeccCCCcEEEEEecCCCCEEEEeeCC----CeEEEEeCCCCC-ceeE-EecCC---eE
Q 039044 70 -----QVKMWPLLSG--GQPVTVAMHDAPIKEVAWIPEMNLLATGSWD----KTLKYWDTRQPN-PVHT-QQLPD---RC 133 (194)
Q Consensus 70 -----~i~~~d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~v~vwd~~~~~-~~~~-~~~~~---~~ 133 (194)
.|.+||+.++ +....+..+...+.... .|+|+.|+..+.+ +.|.+||+.++. .... ..... ..
T Consensus 290 ~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~ 368 (741)
T 1yr2_A 290 TDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLES 368 (741)
T ss_dssp TCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEE
T ss_pred CCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEE
Confidence 8999999876 41455555555555543 4888888877653 459999998752 2222 22222 23
Q ss_pred EEEecCCCEEEEEcCCCcEEEEECC-CCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 134 YALTVRYPLMVVGTADRNLVVFNLQ-NPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 134 ~~~~~~~~~l~~~~~dg~v~~~d~~-~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
+++. ++..+++...++..++|.+. +++ ....+..+....+..+.++|+++.++...
T Consensus 369 ~~~~-~~~lv~~~~~dg~~~l~~~~~~g~-~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ 425 (741)
T 1yr2_A 369 VGIA-GNRLFASYIHDAKSQVLAFDLDGK-PAGAVSLPGIGSASGLSGRPGDRHAYLSF 425 (741)
T ss_dssp EEEE-BTEEEEEEEETTEEEEEEEETTSC-EEEECBCSSSCEEEEEECCBTCSCEEEEE
T ss_pred EEEE-CCEEEEEEEECCEEEEEEEeCCCC-ceeeccCCCCeEEEEeecCCCCCEEEEEE
Confidence 3444 45567777788877666544 233 23334333456788999999998777543
No 209
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.46 E-value=8e-11 Score=81.75 Aligned_cols=183 Identities=10% Similarity=0.022 Sum_probs=117.8
Q ss_pred eeeEEEcCCCCEEEE-------eeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecC-CCeEEEecCCCeEEEE
Q 039044 3 VSSLCFSPKANILVA-------TSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDD-GTTVFSGGCDKQVKMW 74 (194)
Q Consensus 3 v~~~~~~p~~~~l~~-------~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~~~ 74 (194)
..+++|+++++++++ +..++.|..|+..++....... ....++...+.+++++++ ++++++.. .+.|.+|
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~ 97 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK-PEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLVV 97 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC-CEETTEECCEEEEEECSSSSEEEEEET-TTEEEEE
T ss_pred ccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe-cccCCCCCCCceEEEecCCCcEEEEEC-CCCEEEE
Confidence 468899999988888 6778899999976654211000 000123456889999999 76555554 4479999
Q ss_pred ecCCCCceEE-ecc----CCCcEEEEEecCCCCEEEEeeCC---------------CeEEEEeCCCCCceeEEe--cCCe
Q 039044 75 PLLSGGQPVT-VAM----HDAPIKEVAWIPEMNLLATGSWD---------------KTLKYWDTRQPNPVHTQQ--LPDR 132 (194)
Q Consensus 75 d~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------~~v~vwd~~~~~~~~~~~--~~~~ 132 (194)
|.. ++.... ... ....+.++++.++|+++++...+ +.|..||.. ++...... ....
T Consensus 98 d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~ 175 (314)
T 1pjx_A 98 QTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPN 175 (314)
T ss_dssp ETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEE
T ss_pred eCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcc
Confidence 987 554322 111 12358899999999887776554 577888765 44332221 2346
Q ss_pred EEEEe----cCCCEEEEE-cCCCcEEEEECC-CCCe----eeEEeeCCCc-ceeeEEEEecCCCeeEEE
Q 039044 133 CYALT----VRYPLMVVG-TADRNLVVFNLQ-NPQT----EFKRINSPLK-YQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 133 ~~~~~----~~~~~l~~~-~~dg~v~~~d~~-~~~~----~~~~~~~~~~-~~v~~i~~~p~~~~l~~~ 190 (194)
.++++ ++++.++.+ ..++.|.+||+. +++. ..... ..+. ..+..++++++|..+++.
T Consensus 176 ~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~-~~~~~~~p~~i~~d~~G~l~v~~ 243 (314)
T 1pjx_A 176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHI-PGTHEGGADGMDFDEDNNLLVAN 243 (314)
T ss_dssp EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEEC-CCCSSCEEEEEEEBTTCCEEEEE
T ss_pred eEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEEC-CCCCCCCCCceEECCCCCEEEEE
Confidence 78889 998766554 567889999986 3321 11111 1122 457889999999877764
No 210
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.45 E-value=4.2e-11 Score=83.18 Aligned_cols=178 Identities=11% Similarity=0.028 Sum_probs=115.9
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCccccccccccc-CCCCCeeEEEEecCCCeEEE----ecC---------
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASI-SHDHPVLCSTWKDDGTTVFS----GGC--------- 67 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~----~~~--------- 67 (194)
.+..++++|+|+++++...++.|..|+.. +... ....... .....+..+++.|+|+.+++ |..
T Consensus 87 ~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~--~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~ 163 (305)
T 3dr2_A 87 FTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAH--LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPAD 163 (305)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE--EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCC
T ss_pred ccceeeECCCCCEEEEECCCCEEEEECCC-CCEE--EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccc
Confidence 36789999999977766666789999875 3210 1111111 11234678999999998886 432
Q ss_pred ----CCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCC------CeEEEEeCCCCCceeE---E----ecC
Q 039044 68 ----DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWD------KTLKYWDTRQPNPVHT---Q----QLP 130 (194)
Q Consensus 68 ----d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~v~vwd~~~~~~~~~---~----~~~ 130 (194)
.+.|..+|..+++..... .....+.++|+|+++.|+.+... +.|.+||+.... +.. + ...
T Consensus 164 ~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~ 240 (305)
T 3dr2_A 164 PELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGL 240 (305)
T ss_dssp CSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSC
T ss_pred cccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCC
Confidence 256777887666554332 34567889999999987777654 789999987544 211 1 112
Q ss_pred CeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 131 DRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 131 ~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
...++++++|+ +.+++.+| |.+|+... + ....+..+ ..+.+++|.|+++.|.++.
T Consensus 241 pdgi~~d~~G~-lwv~~~~g-v~~~~~~g-~-~~~~~~~~--~~~~~~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 241 PDGFCVDRGGW-LWSSSGTG-VCVFDSDG-Q-LLGHIPTP--GTASNCTFDQAQQRLFITG 295 (305)
T ss_dssp CCSEEECTTSC-EEECCSSE-EEEECTTS-C-EEEEEECS--SCCCEEEECTTSCEEEEEE
T ss_pred CCeEEECCCCC-EEEecCCc-EEEECCCC-C-EEEEEECC--CceeEEEEeCCCCEEEEEc
Confidence 24688899998 44555555 99999853 3 23333332 2488999999998877765
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.45 E-value=1.2e-10 Score=81.61 Aligned_cols=180 Identities=11% Similarity=-0.029 Sum_probs=114.6
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCccccccccccc--CCCCCeeEEEEecCCCeEEEecC------CCeEEE
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASI--SHDHPVLCSTWKDDGTTVFSGGC------DKQVKM 73 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~------d~~i~~ 73 (194)
.+.+++++|+++++++. .+ .|.+||..++.... ..... .....+..++++|+|+++++... .+.|..
T Consensus 91 ~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~---~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~ 165 (326)
T 2ghs_A 91 MGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTL---HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYH 165 (326)
T ss_dssp CEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEE---EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEE
T ss_pred cceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEE---EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEE
Confidence 47889999999877754 44 48889987654210 11110 11246889999999987765532 245555
Q ss_pred EecCCCCceEEeccCCCcEEEEEecCCCCEEEEe-eCCCeEEEEeCC--CC-Cc-----eeEEe---cCCeEEEEecCCC
Q 039044 74 WPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATG-SWDKTLKYWDTR--QP-NP-----VHTQQ---LPDRCYALTVRYP 141 (194)
Q Consensus 74 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~vwd~~--~~-~~-----~~~~~---~~~~~~~~~~~~~ 141 (194)
++ +++ ...+..+......++|+|+++.++.+ +.++.|.+||+. ++ +. ...+. .....+++++++.
T Consensus 166 ~~--~g~-~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~ 242 (326)
T 2ghs_A 166 VA--KGK-VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH 242 (326)
T ss_dssp EE--TTE-EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC
T ss_pred Ee--CCc-EEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC
Confidence 55 333 33333333457899999999876554 457899999986 44 32 11111 1124678888998
Q ss_pred EEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEe-cCCCeeEEEEe
Q 039044 142 LMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAF-PDQQGFLVCIH 192 (194)
Q Consensus 142 ~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~-p~~~~l~~~~~ 192 (194)
..++...++.|..||.. ++. ...... ....+.+++|. |+++.|.++..
T Consensus 243 lwva~~~~~~v~~~d~~-g~~-~~~i~~-~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 243 IWNARWGEGAVDRYDTD-GNH-IARYEV-PGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEEEETTTEEEEECTT-CCE-EEEEEC-SCSBEEEEEEESTTSCEEEEEEB
T ss_pred EEEEEeCCCEEEEECCC-CCE-EEEEEC-CCCCcEEEEEecCCCCEEEEEec
Confidence 77766667889999984 432 233332 33468999998 89887766643
No 212
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.43 E-value=8.9e-11 Score=84.45 Aligned_cols=183 Identities=8% Similarity=0.022 Sum_probs=120.2
Q ss_pred eEEEcCCCCEEEEeeCC------CeEEEEecccCCccccccccccc--CC-CCCeeEEEEecCCCeEEEec---------
Q 039044 5 SLCFSPKANILVATSWD------NQVRCWEISRGGTGVASVPKASI--SH-DHPVLCSTWKDDGTTVFSGG--------- 66 (194)
Q Consensus 5 ~~~~~p~~~~l~~~~~d------~~i~i~~~~~~~~~~~~~~~~~~--~~-~~~i~~~~~~~~~~~l~~~~--------- 66 (194)
.+...|++ +++++..+ +.+.++|..+.+. ..... .. ...-..+.|+|+++.+++..
T Consensus 142 ~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v-----~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~ 215 (462)
T 2ece_A 142 TVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEP-----LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIED 215 (462)
T ss_dssp EEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCE-----EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTT
T ss_pred ceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeE-----EEEEccCCCCccccceEEECCCCCEEEEccCcCcccccc
Confidence 46778999 76666555 7899999887653 11111 11 12234588899999888884
Q ss_pred ----------CCCeEEEEecCCCCceEEeccC--CCcEEEEEe--cCCCCEEEEee------CCCeEEEEeCCCCCc--e
Q 039044 67 ----------CDKQVKMWPLLSGGQPVTVAMH--DAPIKEVAW--IPEMNLLATGS------WDKTLKYWDTRQPNP--V 124 (194)
Q Consensus 67 ----------~d~~i~~~d~~~~~~~~~~~~~--~~~v~~~~~--~~~~~~l~~~~------~d~~v~vwd~~~~~~--~ 124 (194)
....|.+||+.+++.+.++... ......+.| +|+++++.++. .+++|.+|....++. .
T Consensus 216 g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~ 295 (462)
T 2ece_A 216 GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAE 295 (462)
T ss_dssp CCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEE
T ss_pred ccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEE
Confidence 3689999999988777766542 134455655 99999877766 466887765543321 0
Q ss_pred eEE---------------------ecCCeEEEEecCCCEEEEEcC-CCcEEEEECCCCCe--eeEEeeCCC---------
Q 039044 125 HTQ---------------------QLPDRCYALTVRYPLMVVGTA-DRNLVVFNLQNPQT--EFKRINSPL--------- 171 (194)
Q Consensus 125 ~~~---------------------~~~~~~~~~~~~~~~l~~~~~-dg~v~~~d~~~~~~--~~~~~~~~~--------- 171 (194)
..+ ......+.+++++++|+++.. .+.|.+||+..... ....+..+.
T Consensus 296 ~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~ 375 (462)
T 2ece_A 296 KVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPA 375 (462)
T ss_dssp EEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTT
T ss_pred EEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccc
Confidence 100 112357889999999888776 67899999864321 222222210
Q ss_pred ----cceeeEEEEecCCCeeEEEEee
Q 039044 172 ----KYQTRCVAAFPDQQGFLVCIHL 193 (194)
Q Consensus 172 ----~~~v~~i~~~p~~~~l~~~~~~ 193 (194)
.+..+.++++|||++|+++..+
T Consensus 376 G~~~~ggPr~~~lSpDGk~LyVaNsl 401 (462)
T 2ece_A 376 GHKLTGAPQMLEISRDGRRVYVTNSL 401 (462)
T ss_dssp SCCCCSCCCCEEECTTSSEEEEECCC
T ss_pred cccCCCCCCEEEEcCCCCEEEEEcCC
Confidence 1136899999999999998743
No 213
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.43 E-value=3e-10 Score=81.06 Aligned_cols=182 Identities=7% Similarity=-0.082 Sum_probs=106.3
Q ss_pred eEEEcCCCCEEEEee----------CCCeEEEEecccCCcccccccc--cccCCCCCeeEEEEecCCCeEEEecC--CCe
Q 039044 5 SLCFSPKANILVATS----------WDNQVRCWEISRGGTGVASVPK--ASISHDHPVLCSTWKDDGTTVFSGGC--DKQ 70 (194)
Q Consensus 5 ~~~~~p~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~ 70 (194)
.++++||++.++++. .++.|.+||..+.+........ ...........+.|+|||++|+.+.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 689999999999886 3678999998765321000000 00001123458999999999998874 578
Q ss_pred EEEEecCCCCceEE-eccCCCcEEE--------E-------------------------------------EecCCCCEE
Q 039044 71 VKMWPLLSGGQPVT-VAMHDAPIKE--------V-------------------------------------AWIPEMNLL 104 (194)
Q Consensus 71 i~~~d~~~~~~~~~-~~~~~~~v~~--------~-------------------------------------~~~~~~~~l 104 (194)
|.++| .+++.+.. +... ..+.- + .+.+++..+
T Consensus 150 v~viD-~t~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 227 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSP-TCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRI 227 (373)
T ss_pred EEEEE-CCCCEEeEEcCCC-ceEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEE
Confidence 99999 88887766 4321 11100 0 111111222
Q ss_pred EEeeCCCeEEEEeCCCCCc--eeEEec-------------CCeEEEEecCCCEEEEEcC----------CCcEEEEECCC
Q 039044 105 ATGSWDKTLKYWDTRQPNP--VHTQQL-------------PDRCYALTVRYPLMVVGTA----------DRNLVVFNLQN 159 (194)
Q Consensus 105 ~~~~~d~~v~vwd~~~~~~--~~~~~~-------------~~~~~~~~~~~~~l~~~~~----------dg~v~~~d~~~ 159 (194)
+..+..+.+.+.|+..... +..+.. ....+.++++++.+++... ++.|.++|+.+
T Consensus 228 ~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t 307 (373)
T 2mad_H 228 VWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLV 307 (373)
T ss_pred EEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCC
Confidence 2222344555555543321 111110 1123678888887777653 35799999988
Q ss_pred CCeeeEEeeCCCcceeeEEEEecCCC-eeEEEE
Q 039044 160 PQTEFKRINSPLKYQTRCVAAFPDQQ-GFLVCI 191 (194)
Q Consensus 160 ~~~~~~~~~~~~~~~v~~i~~~p~~~-~l~~~~ 191 (194)
.+. ...+. .......++|+|||+ .++++.
T Consensus 308 ~~v-v~~i~--~g~~p~~i~~s~Dg~~~l~v~~ 337 (373)
T 2mad_H 308 GQT-SSQIS--LGHDVDAISVAQDGGPDLYALS 337 (373)
T ss_pred CEE-EEEEE--CCCCcCeEEECCCCCeEEEEEc
Confidence 764 34443 234579999999999 565543
No 214
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.42 E-value=4.3e-10 Score=76.10 Aligned_cols=178 Identities=8% Similarity=-0.055 Sum_probs=117.5
Q ss_pred eeEEEcCCCCEEEEeeC--CCeEEEEecccCCcccccccccc-cCCCCCeeEEEEecCCCeE-EEecCCCeEEEEecCCC
Q 039044 4 SSLCFSPKANILVATSW--DNQVRCWEISRGGTGVASVPKAS-ISHDHPVLCSTWKDDGTTV-FSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 4 ~~~~~~p~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~ 79 (194)
..++|+|++.++++.+. ++.|+++|+.+++. .... .+.......+++. ++.| ++...++.+.++|..+.
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v-----~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQTGKV-----ENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTL 96 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTTCCE-----EEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTT
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCCCCE-----EEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCC
Confidence 57899998755555443 57999999998753 1111 1111222345554 4444 45556889999999998
Q ss_pred CceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecC--------CeEEEEecCCCEEEEEcCCCc
Q 039044 80 GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP--------DRCYALTVRYPLMVVGTADRN 151 (194)
Q Consensus 80 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~~~~dg~ 151 (194)
+.+.++...... ...++++|+.++++..++.|.++|..+.+.+..+... ...+.+. ++...+....++.
T Consensus 97 ~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 97 SNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDC 173 (266)
T ss_dssp EEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred cEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCe
Confidence 888877533122 2345567877777777899999999998887776642 2345566 6654455556789
Q ss_pred EEEEECCCCCeeeEEeeCC-C-----------cceeeEEEEecCCCeeEEEEe
Q 039044 152 LVVFNLQNPQTEFKRINSP-L-----------KYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 152 v~~~d~~~~~~~~~~~~~~-~-----------~~~v~~i~~~p~~~~l~~~~~ 192 (194)
|.+.|..+++.. ..+..+ . ....+.|+|+|+++.+.++..
T Consensus 174 V~vID~~tg~V~-~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk 225 (266)
T 2iwa_A 174 IARISAKDGTLL-GWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK 225 (266)
T ss_dssp EEEEETTTCCEE-EEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCcEE-EEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC
Confidence 999999998743 333221 1 135689999999988777654
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.41 E-value=3.6e-10 Score=81.66 Aligned_cols=182 Identities=4% Similarity=-0.073 Sum_probs=117.0
Q ss_pred EEEcCCCCEEEEeeCCC--eEEEEecccCCcccccccccc-cCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCce
Q 039044 6 LCFSPKANILVATSWDN--QVRCWEISRGGTGVASVPKAS-ISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQP 82 (194)
Q Consensus 6 ~~~~p~~~~l~~~~~d~--~i~i~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 82 (194)
++|+|+++.|+++..++ .|.+++....... ...... ......+.+++++|++..|+.+..++.|+.||..++...
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~--~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~ 253 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAP--TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT 253 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCE--EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCcee--EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE
Confidence 78999999888888766 7888887654320 001011 114456788999995555666777899999998876532
Q ss_pred EE----eccCCCcE--EEEEecCC-CCEEEEeeCCCeEEEEeCCCCCceeEEe-----------------cCCeEEEEec
Q 039044 83 VT----VAMHDAPI--KEVAWIPE-MNLLATGSWDKTLKYWDTRQPNPVHTQQ-----------------LPDRCYALTV 138 (194)
Q Consensus 83 ~~----~~~~~~~v--~~~~~~~~-~~~l~~~~~d~~v~vwd~~~~~~~~~~~-----------------~~~~~~~~~~ 138 (194)
.. ..++...- ..++|+|+ +.++++-..++.|+.|+.... ...... .....+++++
T Consensus 254 ~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~ 332 (409)
T 3hrp_A 254 LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE 332 (409)
T ss_dssp EEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT
T ss_pred EEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC
Confidence 22 11222222 39999995 666666667889999997643 111111 1235789999
Q ss_pred CCCEEEEEc-CCCcEEEEECCCCCeeeEEeeCC------------CcceeeEEEEecCCCeeEEE
Q 039044 139 RYPLMVVGT-ADRNLVVFNLQNPQTEFKRINSP------------LKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 139 ~~~~l~~~~-~dg~v~~~d~~~~~~~~~~~~~~------------~~~~v~~i~~~p~~~~l~~~ 190 (194)
+++.+++-. .++.|+.||+.++......-... .-.....++++|+|..+++-
T Consensus 333 dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad 397 (409)
T 3hrp_A 333 DGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAE 397 (409)
T ss_dssp TCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEE
T ss_pred CCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEE
Confidence 999777777 78899999976654221111100 01347899999997766653
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.41 E-value=5e-10 Score=77.50 Aligned_cols=178 Identities=9% Similarity=0.043 Sum_probs=113.1
Q ss_pred eeEEEcCC-CCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCce
Q 039044 4 SSLCFSPK-ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQP 82 (194)
Q Consensus 4 ~~~~~~p~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 82 (194)
.+..|+|+ +.++++...++.|..||..++.. ........+.+++++++++++++. ++.|.+||.++++..
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-------~~~~~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-------QRVTMDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAV 86 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCE-------EEEECSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEE
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcE-------EEEeCCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEE
Confidence 36789995 55666777788999999876532 112234678999999999955554 567999998876543
Q ss_pred EEecc----CCCcEEEEEecCCCCEEEEeeC-----------CCeEEEEeCCCCCceeEE--ecCCeEEEEecCCCEEEE
Q 039044 83 VTVAM----HDAPIKEVAWIPEMNLLATGSW-----------DKTLKYWDTRQPNPVHTQ--QLPDRCYALTVRYPLMVV 145 (194)
Q Consensus 83 ~~~~~----~~~~v~~~~~~~~~~~l~~~~~-----------d~~v~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~l~~ 145 (194)
..... ....+++++++|+|+++++... .+.|..+|.. ++..... ......++++|+++.++.
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEE
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEE
Confidence 22221 1245789999999997665432 1344444443 2322211 123467899999987654
Q ss_pred -EcCCCcEEEEECC--CCCeee-EEe--eCCCcceeeEEEEecCCCeeEEEE
Q 039044 146 -GTADRNLVVFNLQ--NPQTEF-KRI--NSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 146 -~~~dg~v~~~d~~--~~~~~~-~~~--~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
.+.++.|..||+. ++.... ... .......+..++++++|..+++..
T Consensus 166 ~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~ 217 (297)
T 3g4e_A 166 IDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACY 217 (297)
T ss_dssp EEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEE
T ss_pred ecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEc
Confidence 5557889999873 443211 111 112235678899999997766643
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.40 E-value=1.7e-10 Score=80.16 Aligned_cols=178 Identities=6% Similarity=-0.045 Sum_probs=117.5
Q ss_pred eeeEEEcCCCC-EEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 3 VSSLCFSPKAN-ILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 3 v~~~~~~p~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.....|+|+++ ++++...++.|..|+.. +. ..........+..++++++|+++++...++.|..|+.. ++.
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~------~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT------VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETT-SC------EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred ccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC------EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCE
Confidence 35688999988 66777778999999873 32 12223345678899999999977776667889999975 443
Q ss_pred eEEeccC-----CCcEEEEEecCCCCEEEE----eeC-------------CCeEEEEeCCCCCceeEEe-cCCeEEEEec
Q 039044 82 PVTVAMH-----DAPIKEVAWIPEMNLLAT----GSW-------------DKTLKYWDTRQPNPVHTQQ-LPDRCYALTV 138 (194)
Q Consensus 82 ~~~~~~~-----~~~v~~~~~~~~~~~l~~----~~~-------------d~~v~vwd~~~~~~~~~~~-~~~~~~~~~~ 138 (194)
..+..+ ...++++++.|+|++.++ +.. .+.|..+|..+++...... .....++++|
T Consensus 119 -~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl~~sp 197 (305)
T 3dr2_A 119 -HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSP 197 (305)
T ss_dssp -EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEEEEECT
T ss_pred -EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCCCcceEEcC
Confidence 222211 134678999999998876 331 2568888886665433222 2335789999
Q ss_pred CCCEEEEEcCC------CcEEEEECCCCCee-eEEeeCCCcceeeEEEEecCCCeeEE
Q 039044 139 RYPLMVVGTAD------RNLVVFNLQNPQTE-FKRINSPLKYQTRCVAAFPDQQGFLV 189 (194)
Q Consensus 139 ~~~~l~~~~~d------g~v~~~d~~~~~~~-~~~~~~~~~~~v~~i~~~p~~~~l~~ 189 (194)
+++.|+.+... +.|++|++...... ..............++++++|...++
T Consensus 198 dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~ 255 (305)
T 3dr2_A 198 DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS 255 (305)
T ss_dssp TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC
T ss_pred CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe
Confidence 99988777665 68999998754311 11111112334567888888885544
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.38 E-value=1e-09 Score=76.95 Aligned_cols=175 Identities=7% Similarity=-0.039 Sum_probs=112.9
Q ss_pred eeEEEcCC-CCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCce
Q 039044 4 SSLCFSPK-ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQP 82 (194)
Q Consensus 4 ~~~~~~p~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 82 (194)
.+..|+|+ +.++++...++.|..|+..++.. ... .....+.++.|+|+++++++. . ..|.+||..+++..
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~------~~~-~~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRK------TVH-ALPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLT 122 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEE------EEE-ECSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEE
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcE------EEE-ECCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEE
Confidence 46789997 45666766788999999876532 111 224578999999999877765 3 34999998877643
Q ss_pred EEecc----CCCcEEEEEecCCCCEEEEeeC------CCeEEEEeCCCCCceeEEe--cCCeEEEEecCCCEEEEE-cCC
Q 039044 83 VTVAM----HDAPIKEVAWIPEMNLLATGSW------DKTLKYWDTRQPNPVHTQQ--LPDRCYALTVRYPLMVVG-TAD 149 (194)
Q Consensus 83 ~~~~~----~~~~v~~~~~~~~~~~l~~~~~------d~~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~-~~d 149 (194)
..... ....+++++++|+|+++++... .+.|..+| +++...... .....++++++++.++.+ +.+
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 32211 1246889999999987665542 24566666 333222111 234578999999876554 557
Q ss_pred CcEEEEECC--CC-Ce----eeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 150 RNLVVFNLQ--NP-QT----EFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 150 g~v~~~d~~--~~-~~----~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
+.|.+||+. ++ .. .+... ......+..+.+.++|..+++.
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~-~~~~~~p~gi~~d~~G~lwva~ 247 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDS-TGIKGGMDGSVCDAEGHIWNAR 247 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEEC-TTSSSEEEEEEECTTSCEEEEE
T ss_pred CEEEEEEcccccCCcccCceEEEEC-CCCCCCCCeeEECCCCCEEEEE
Confidence 889999986 44 21 11111 1223456789999999876654
No 219
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.35 E-value=1.2e-09 Score=73.29 Aligned_cols=178 Identities=10% Similarity=0.012 Sum_probs=116.1
Q ss_pred eeEEEcCCCCEEEEeeCCC--eEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEe-cCCCeEEEEecCCCC
Q 039044 4 SSLCFSPKANILVATSWDN--QVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSG-GCDKQVKMWPLLSGG 80 (194)
Q Consensus 4 ~~~~~~p~~~~l~~~~~d~--~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~ 80 (194)
..+.|+ ++.++.+.+.+| .|+.+|+.+++. ..... -..........++++.|... ..++.+.+||.++.+
T Consensus 46 qGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv-----~~~~~-l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 46 EGFFYR-NGYFYESTGLNGRSSIRKVDIESGKT-----LQQIE-LGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEECTTTCCE-----EEEEE-CCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCC
T ss_pred ceEEEE-CCEEEEECCCCCCceEEEEECCCCcE-----EEEEe-cCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCc
Confidence 467787 666667777665 899999998853 11111 12233333333345555544 468899999999999
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecCC--------eEEEEecCCCEEEEEcCCCcE
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD--------RCYALTVRYPLMVVGTADRNL 152 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~dg~v 152 (194)
.+.++.... ....+++++..|+.+..++.|.++|..+.+.+..+.... +.+.+. +|+..+..-.+..|
T Consensus 119 ~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I 194 (262)
T 3nol_A 119 QVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKI 194 (262)
T ss_dssp EEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred EEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeE
Confidence 988887432 223334577777777668899999999998887765521 234554 66544444467889
Q ss_pred EEEECCCCCeeeEEeeCC----------CcceeeEEEEecCCCeeEEEEe
Q 039044 153 VVFNLQNPQTEFKRINSP----------LKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 153 ~~~d~~~~~~~~~~~~~~----------~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
.+.|.++++..-..-..+ .....+.|+++|+++.|.+...
T Consensus 195 ~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 195 VRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 999999987532222111 1234689999999888777654
No 220
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.35 E-value=2e-09 Score=76.88 Aligned_cols=144 Identities=8% Similarity=-0.059 Sum_probs=103.3
Q ss_pred cCCCCEEEEeeC--CC---eEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEec----------CCCeEEE
Q 039044 9 SPKANILVATSW--DN---QVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGG----------CDKQVKM 73 (194)
Q Consensus 9 ~p~~~~l~~~~~--d~---~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~d~~i~~ 73 (194)
.|+++.+++... .. +|.++|..+.+. .........+ .++++||+++++.+. .++.|.+
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~-----~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~v 101 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSI-----LGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEV 101 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeE-----EEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEE
Confidence 467777777653 22 789999887642 2222222233 899999999999885 3678999
Q ss_pred EecCCCCceEEeccC-------CCcEEEEEecCCCCEEEEeeC--CCeEEEEeCCCCCceeE-EecCCeEEEEecCC-CE
Q 039044 74 WPLLSGGQPVTVAMH-------DAPIKEVAWIPEMNLLATGSW--DKTLKYWDTRQPNPVHT-QQLPDRCYALTVRY-PL 142 (194)
Q Consensus 74 ~d~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~v~vwd~~~~~~~~~-~~~~~~~~~~~~~~-~~ 142 (194)
||..+.+.+..+... ......++|+|+|++|+++.. ++.|.++| .+++.+.. +..+.. +.+.|++ +.
T Consensus 102 iD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~-~~~~~~~~~~ 179 (373)
T 2mad_H 102 FDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC-YHIHPGAPST 179 (373)
T ss_pred EECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce-EEEEeCCCce
Confidence 999888777665422 123568999999999998874 57899999 99888877 665543 4555655 45
Q ss_pred EEEEcCCCcEEEEECCCCCe
Q 039044 143 MVVGTADRNLVVFNLQNPQT 162 (194)
Q Consensus 143 l~~~~~dg~v~~~d~~~~~~ 162 (194)
+++.+.||.+.++|. +++.
T Consensus 180 ~~~~~~dg~~~~vd~-~g~~ 198 (373)
T 2mad_H 180 FYLLCAQGGLAKTDH-AGGA 198 (373)
T ss_pred EEEEcCCCCEEEEEC-CCcE
Confidence 666778999999999 6653
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.33 E-value=2.3e-13 Score=97.03 Aligned_cols=145 Identities=10% Similarity=0.093 Sum_probs=79.8
Q ss_pred CCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCceEEeccCCC
Q 039044 11 KANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDA 90 (194)
Q Consensus 11 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 90 (194)
++..+++++.|+.|+.||..+++. ...... .++.+..+..++..+++++.|+.|+.||.++++.+..+..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~-----~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSI-----KWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCE-----EEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE-----EEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc
Confidence 578899999999999999988753 111111 3444555566777888888999999999999888766653321
Q ss_pred c-EE-EEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecCCeEEEEecCCCEEEEEcCCCcEEEEECCCCCeee
Q 039044 91 P-IK-EVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEF 164 (194)
Q Consensus 91 ~-v~-~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~ 164 (194)
. +. ...+. .+..+++++.++.++.||.++++.+..+..+. ...++|++..+++++.++.|+.||.++++...
T Consensus 81 ~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 81 ELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-ADSLSPSTSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp HHHTTCSCC------CCCCEEEEEEEEECCC-----------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred cccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-cccccccCCEEEEEecCCEEEEEECCCCCEEE
Confidence 1 11 01111 34567778889999999999998876665443 24456788899999999999999999887543
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.30 E-value=1.5e-09 Score=83.43 Aligned_cols=184 Identities=11% Similarity=0.093 Sum_probs=118.0
Q ss_pred eeEEEcCCCCEEEEeeCCC-------------eEEEEecccCCcccccccccccC-CCCCeeEEEEecCCCeEEEec---
Q 039044 4 SSLCFSPKANILVATSWDN-------------QVRCWEISRGGTGVASVPKASIS-HDHPVLCSTWKDDGTTVFSGG--- 66 (194)
Q Consensus 4 ~~~~~~p~~~~l~~~~~d~-------------~i~i~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~--- 66 (194)
..++|+ |++.|+.++.+. .|++|++.+..... ........ +......+.|+||+++|+...
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDD-RLVFGAIPAQHHRYVGATVTEDDRFLLISAANS 255 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGC-EEEESCSGGGCCSEEEEEECTTSCEEEEEEESS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccc-eEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC
Confidence 467899 999898887774 38899987653210 11111122 334577899999999876433
Q ss_pred -CCCeEEEEecCCCC-ceEEeccCCCcEEEEEecCCCCEEEEee-CC---CeEEEEeCCCCCc--eeEE-ecCCeEEEEe
Q 039044 67 -CDKQVKMWPLLSGG-QPVTVAMHDAPIKEVAWIPEMNLLATGS-WD---KTLKYWDTRQPNP--VHTQ-QLPDRCYALT 137 (194)
Q Consensus 67 -~d~~i~~~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d---~~v~vwd~~~~~~--~~~~-~~~~~~~~~~ 137 (194)
....|.++|+.++. ....+..+....... |++++..|+..+ .+ +.|..+|+.+++. ...+ ......+.++
T Consensus 256 ~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s 334 (693)
T 3iuj_A 256 TSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVH 334 (693)
T ss_dssp SSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEE
T ss_pred CCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEE
Confidence 23589999998764 455566566555554 566665554443 33 6799999987654 2222 2222223899
Q ss_pred cCCCEEEEEcC-CC--cEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 138 VRYPLMVVGTA-DR--NLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 138 ~~~~~l~~~~~-dg--~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
++++.|+.... ++ .|++||+.... ...+..+....+..+.++|+++.++....
T Consensus 335 ~~g~~lv~~~~~~g~~~l~~~d~~g~~--~~~l~~p~~~~~~~~~~~~d~~~l~~~~s 390 (693)
T 3iuj_A 335 SGSGYLFAEYMVDATARVEQFDYEGKR--VREVALPGLGSVSGFNGKHDDPALYFGFE 390 (693)
T ss_dssp EETTEEEEEEEETTEEEEEEECTTSCE--EEEECCSSSSEEEECCCCTTCSCEEEEEE
T ss_pred EECCEEEEEEEECCeeEEEEEECCCCe--eEEeecCCCceEEeeecCCCCCEEEEEec
Confidence 99998877665 43 58899987543 23343344456778888899888776543
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.29 E-value=4.4e-10 Score=80.90 Aligned_cols=181 Identities=8% Similarity=0.070 Sum_probs=118.7
Q ss_pred CCCCEEE-EeeCCCeEEEEecccCCcccccccccc-----c-C-CCCCeeEEEEecCCCeEEEecCC------CeEEEEe
Q 039044 10 PKANILV-ATSWDNQVRCWEISRGGTGVASVPKAS-----I-S-HDHPVLCSTWKDDGTTVFSGGCD------KQVKMWP 75 (194)
Q Consensus 10 p~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~-----~-~-~~~~i~~~~~~~~~~~l~~~~~d------~~i~~~d 75 (194)
+++++|+ .+..++.|.++|+.+..... ...... . . .......+...|+| .++++..+ |.|.++|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p-~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREP-KIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSC-EEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCc-eeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 6776655 56667889999986542210 111111 0 1 11234567788999 66665555 7899999
Q ss_pred cCCCCceEEeccCC---CcEEEEEecCCCCEEEEee-------------------CCCeEEEEeCCCCCceeEEecCC--
Q 039044 76 LLSGGQPVTVAMHD---APIKEVAWIPEMNLLATGS-------------------WDKTLKYWDTRQPNPVHTQQLPD-- 131 (194)
Q Consensus 76 ~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~-------------------~d~~v~vwd~~~~~~~~~~~~~~-- 131 (194)
.++.+.+.++.... .--+.+.|+|+++.++++. ...+|.+||+.+++.+.++....
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 99999888875322 2245688899999888884 36899999999888777777641
Q ss_pred ---eEEEE--ecCCCEEEEEcC------CCcEEEEECCCCCeeeEEe---eC-----CC----------cceeeEEEEec
Q 039044 132 ---RCYAL--TVRYPLMVVGTA------DRNLVVFNLQNPQTEFKRI---NS-----PL----------KYQTRCVAAFP 182 (194)
Q Consensus 132 ---~~~~~--~~~~~~l~~~~~------dg~v~~~d~~~~~~~~~~~---~~-----~~----------~~~v~~i~~~p 182 (194)
..+.| +|++++++++++ +++|.+|....++...... .. .. ......|.++|
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 23444 999998888774 5678776655432111111 00 00 23468899999
Q ss_pred CCCeeEEEEe
Q 039044 183 DQQGFLVCIH 192 (194)
Q Consensus 183 ~~~~l~~~~~ 192 (194)
||++|.++..
T Consensus 331 DGrfLYVSnr 340 (462)
T 2ece_A 331 DDKFLYLSLW 340 (462)
T ss_dssp TSCEEEEEET
T ss_pred CCCEEEEEeC
Confidence 9999988754
No 224
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.29 E-value=1.1e-09 Score=79.08 Aligned_cols=179 Identities=9% Similarity=-0.015 Sum_probs=113.3
Q ss_pred eEEEcCCCCEEEEee----------CCCeEEEEecccCCcccccccccc-cC------CCCCeeEEEEecCCCeEEEecC
Q 039044 5 SLCFSPKANILVATS----------WDNQVRCWEISRGGTGVASVPKAS-IS------HDHPVLCSTWKDDGTTVFSGGC 67 (194)
Q Consensus 5 ~~~~~p~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~~~-~~------~~~~i~~~~~~~~~~~l~~~~~ 67 (194)
.++++||++.++++. .++.|.++|..+.+. .... .+ .......+.++||+++++.+..
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v-----v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~ 196 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP-----IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQF 196 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE-----EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEEC
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE-----EEEEECCCccccccCCCcceEEEcCCCCEEEEEec
Confidence 689999999888876 367899999987753 1111 11 1233567899999999998864
Q ss_pred --CCeEEEEecCCCCceEEeccCCC-cE------EEEE-------------------------------------ecCCC
Q 039044 68 --DKQVKMWPLLSGGQPVTVAMHDA-PI------KEVA-------------------------------------WIPEM 101 (194)
Q Consensus 68 --d~~i~~~d~~~~~~~~~~~~~~~-~v------~~~~-------------------------------------~~~~~ 101 (194)
++.|.+.|+.+++.+.++..... .+ .-+. +.+++
T Consensus 197 ~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg 276 (426)
T 3c75_H 197 SPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS 276 (426)
T ss_dssp SSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT
T ss_pred CCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC
Confidence 57899999998877665542110 00 0022 23444
Q ss_pred CEEEEeeCCCeEEEEeCCCCCce--eEE-------------ecCCeEEEEecCCCEEEEEcC----------CCcEEEEE
Q 039044 102 NLLATGSWDKTLKYWDTRQPNPV--HTQ-------------QLPDRCYALTVRYPLMVVGTA----------DRNLVVFN 156 (194)
Q Consensus 102 ~~l~~~~~d~~v~vwd~~~~~~~--~~~-------------~~~~~~~~~~~~~~~l~~~~~----------dg~v~~~d 156 (194)
..++..+..+.+.+.|+...... ..+ ......++++++++.+++... ++.|.++|
T Consensus 277 ~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID 356 (426)
T 3c75_H 277 GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLN 356 (426)
T ss_dssp CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEE
Confidence 44444445566666666543311 111 111224789999888777643 35799999
Q ss_pred CCCCCeeeEEeeCCCcceeeEEEEecCCC-eeEEEE
Q 039044 157 LQNPQTEFKRINSPLKYQTRCVAAFPDQQ-GFLVCI 191 (194)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~-~l~~~~ 191 (194)
+.+.+. ...+. .......+.|+|||+ .++++-
T Consensus 357 ~~T~kv-v~~I~--vg~~P~gia~spDg~~~lyv~n 389 (426)
T 3c75_H 357 AETGER-INKIE--LGHEIDSINVSQDAEPLLYALS 389 (426)
T ss_dssp TTTCCE-EEEEE--EEEEECEEEECCSSSCEEEEEE
T ss_pred CCCCeE-EEEEE--CCCCcCeEEEccCCCEEEEEEc
Confidence 998874 33443 234589999999999 666543
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.28 E-value=2.4e-09 Score=82.09 Aligned_cols=183 Identities=13% Similarity=0.141 Sum_probs=124.0
Q ss_pred eEEEcCCCCEEEEeeCCC-------------------eEEEEecccCCcccccccccccCC-------CCCeeEEEEecC
Q 039044 5 SLCFSPKANILVATSWDN-------------------QVRCWEISRGGTGVASVPKASISH-------DHPVLCSTWKDD 58 (194)
Q Consensus 5 ~~~~~p~~~~l~~~~~d~-------------------~i~i~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~ 58 (194)
.++++|++..++.+..++ .|..+|..+++..- ......| ......+....+
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W---~~~~~~~d~wd~~~~~~p~l~~~~~d 323 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKW---HYQETPGDNWDYTSTQPMILADIKIA 323 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEE---EEESSTTCCSCCCCCSCCEEEEEEET
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEE---EEecCCCcccccccCCCcEEEecccC
Confidence 578889888888887664 48888888775311 1111112 122233344447
Q ss_pred C---CeEEEecCCCeEEEEecCCCCceEEeccCC-----------CcE------------------------EEEEecCC
Q 039044 59 G---TTVFSGGCDKQVKMWPLLSGGQPVTVAMHD-----------API------------------------KEVAWIPE 100 (194)
Q Consensus 59 ~---~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-----------~~v------------------------~~~~~~~~ 100 (194)
| ..++.++.+|.++++|.++++.+..+.... .++ ..++++|+
T Consensus 324 G~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~ 403 (677)
T 1kb0_A 324 GKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQ 403 (677)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETT
T ss_pred CcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCC
Confidence 7 689999999999999999999876554211 011 14678888
Q ss_pred CCEEEEeeC-------------------------------------------CCeEEEEeCCCCCceeEEecCC--eEEE
Q 039044 101 MNLLATGSW-------------------------------------------DKTLKYWDTRQPNPVHTQQLPD--RCYA 135 (194)
Q Consensus 101 ~~~l~~~~~-------------------------------------------d~~v~vwd~~~~~~~~~~~~~~--~~~~ 135 (194)
..++++... .+.|..||+.+++.+-+..... ....
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~ 483 (677)
T 1kb0_A 404 TGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGT 483 (677)
T ss_dssp TTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCE
T ss_pred CCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcc
Confidence 777776532 2789999999999877665542 3445
Q ss_pred EecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 136 LTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 136 ~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
+...+..++.++.+|.+++||+++++...... .+......-+.+.++|+.+++..
T Consensus 484 ~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~-~~~~~~~~p~~y~~~G~~~v~~~ 538 (677)
T 1kb0_A 484 LTTAGNVVFQGTADGRLVAYHAATGEKLWEAP-TGTGVVAAPSTYMVDGRQYVSVA 538 (677)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEEE-CSSCCCSCCEEEEETTEEEEEEE
T ss_pred eEeCCCEEEEECCCCcEEEEECCCCceeeeee-CCCCcccCCEEEEeCCEEEEEEe
Confidence 67788889999999999999999998654433 33334445667778887666543
No 226
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.27 E-value=1.2e-09 Score=78.97 Aligned_cols=144 Identities=13% Similarity=0.060 Sum_probs=104.1
Q ss_pred CCCCEEEEeeCC-----CeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEec----------CCCeEEEE
Q 039044 10 PKANILVATSWD-----NQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGG----------CDKQVKMW 74 (194)
Q Consensus 10 p~~~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~d~~i~~~ 74 (194)
|+++.+++.... +.|.++|..+.+. ...+..-..+ .+.++||+++++.+. .++.|.++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~v-----v~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsvi 154 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRI-----LGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVF 154 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEE-----EEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEE-----EEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEE
Confidence 466666666542 6899999988742 2222222334 899999999988876 46789999
Q ss_pred ecCCCCceEEeccC-------CCcEEEEEecCCCCEEEEeeC--CCeEEEEeCCCCCceeEEecCCeEEEEecCC-CEEE
Q 039044 75 PLLSGGQPVTVAMH-------DAPIKEVAWIPEMNLLATGSW--DKTLKYWDTRQPNPVHTQQLPDRCYALTVRY-PLMV 144 (194)
Q Consensus 75 d~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-~~l~ 144 (194)
|..+.+.+.++.-. ......++++|+|++++++.. ++.|.+.|+.+.+.+.++..+.. ..+.|++ +.++
T Consensus 155 D~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-~~~~p~g~~~~v 233 (426)
T 3c75_H 155 DPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-YHIFPASPTVFY 233 (426)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-EEEEEEETTEEE
T ss_pred ECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-eeeccCCCcEEE
Confidence 99999888776421 134567899999999998874 57999999999998888877543 3444443 5566
Q ss_pred EEcCCCcEEEEECCCCC
Q 039044 145 VGTADRNLVVFNLQNPQ 161 (194)
Q Consensus 145 ~~~~dg~v~~~d~~~~~ 161 (194)
+.+.||.+.+.++.+.+
T Consensus 234 ~~~~dG~~~~V~~~~~~ 250 (426)
T 3c75_H 234 MNCRDGSLARVDFADGE 250 (426)
T ss_dssp EEETTSSEEEEECCTTC
T ss_pred EEcCCCCEEEEECCCCc
Confidence 67778888888884443
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.26 E-value=4.4e-09 Score=80.82 Aligned_cols=184 Identities=11% Similarity=0.143 Sum_probs=122.9
Q ss_pred eEEEcCCCCEEEEeeCCCe-------------------EEEEecccCCcccccccccccCC-------CCCeeEEEEecC
Q 039044 5 SLCFSPKANILVATSWDNQ-------------------VRCWEISRGGTGVASVPKASISH-------DHPVLCSTWKDD 58 (194)
Q Consensus 5 ~~~~~p~~~~l~~~~~d~~-------------------i~i~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~ 58 (194)
.++++|+..+++.+..++. |..+|..+++..-. .....| ..+........+
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~---~~~~~~d~wd~~~~~~~~l~d~~~~ 315 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWH---YQTTPGDAWDYTATQHMILAELPID 315 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEE---EESSTTCCSCCCCCSCEEEEEEEET
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEe---eecCCcccccccCCCCcEEEeeccC
Confidence 5788898889999887764 89999988764111 111111 122222333335
Q ss_pred CC---eEEEecCCCeEEEEecCCCCceEEeccCC-C--------------------------------------cEEEEE
Q 039044 59 GT---TVFSGGCDKQVKMWPLLSGGQPVTVAMHD-A--------------------------------------PIKEVA 96 (194)
Q Consensus 59 ~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-~--------------------------------------~v~~~~ 96 (194)
|+ .++.++.+|.++++|.++|+.+....... . .-..++
T Consensus 316 G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a 395 (689)
T 1yiq_A 316 GKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMS 395 (689)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCE
T ss_pred CcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcce
Confidence 65 78899999999999999998864322110 0 001267
Q ss_pred ecCCCCEEEEeeC---------------------------------------------CCeEEEEeCCCCCceeEEecCC
Q 039044 97 WIPEMNLLATGSW---------------------------------------------DKTLKYWDTRQPNPVHTQQLPD 131 (194)
Q Consensus 97 ~~~~~~~l~~~~~---------------------------------------------d~~v~vwd~~~~~~~~~~~~~~ 131 (194)
++|+..++++... +|.|+.||+.+++.+-+.....
T Consensus 396 ~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~ 475 (689)
T 1yiq_A 396 YNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT 475 (689)
T ss_dssp EETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS
T ss_pred ECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC
Confidence 8887777665421 3779999999999887765543
Q ss_pred --eEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 132 --RCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 132 --~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
..-.+...+..++.++.||.++.||.++++...... .+......-+.|..+|+.+++...
T Consensus 476 ~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~-~~~~~~~~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 476 IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQP-AASGVMAAPVTYSVDGEQYVTFMA 537 (689)
T ss_dssp SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE-CSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CccCccceECCCEEEEECCCCcEEEEECCCCccceeee-CCCCcccCceEEEECCEEEEEEEe
Confidence 233566778899999999999999999998655433 233333455777889987766443
No 228
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.26 E-value=6.5e-10 Score=79.10 Aligned_cols=136 Identities=14% Similarity=0.056 Sum_probs=101.3
Q ss_pred EEEecCCCeEEEecC-----CCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEee----------CCCeEEEEe
Q 039044 53 STWKDDGTTVFSGGC-----DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGS----------WDKTLKYWD 117 (194)
Q Consensus 53 ~~~~~~~~~l~~~~~-----d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~v~vwd 117 (194)
....|+++.++.... ++.|.++|..+++.+.++.....+ . ++++|+|+++++++ .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 445689988888765 679999999999988888755555 4 99999999887765 367899999
Q ss_pred CCCCCceeEEecC----------CeEEEEecCCCEEEEEcC--CCcEEEEECCCCCeeeEEeeCCCcc---e---eeEEE
Q 039044 118 TRQPNPVHTQQLP----------DRCYALTVRYPLMVVGTA--DRNLVVFNLQNPQTEFKRINSPLKY---Q---TRCVA 179 (194)
Q Consensus 118 ~~~~~~~~~~~~~----------~~~~~~~~~~~~l~~~~~--dg~v~~~d~~~~~~~~~~~~~~~~~---~---v~~i~ 179 (194)
..+.+.+.++..+ ...+.++|+|++++++.. ++.|.++|+.+.+.. ..+..+... + -.-+.
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv-~tI~v~g~~~~~P~g~~~~~~ 194 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK-RMLDVPDCYHIFPTAPDTFFM 194 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEE-EEEECCSEEEEEEEETTEEEE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEE-EEEECCCcceeecCCCceeEE
Confidence 9999988887543 346899999999988864 688999999987643 333222111 1 01247
Q ss_pred EecCCCeeEEEE
Q 039044 180 AFPDQQGFLVCI 191 (194)
Q Consensus 180 ~~p~~~~l~~~~ 191 (194)
.++||+.+.+..
T Consensus 195 ~~~DG~~~~v~~ 206 (386)
T 3sjl_D 195 HCRDGSLAKVAF 206 (386)
T ss_dssp EETTSCEEEEEC
T ss_pred ECCCCCEEEEEC
Confidence 788888877764
No 229
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.23 E-value=1e-08 Score=68.91 Aligned_cols=176 Identities=9% Similarity=-0.019 Sum_probs=114.9
Q ss_pred eeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeE-EEecCCCeEEEEecCCCCce
Q 039044 4 SSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV-FSGGCDKQVKMWPLLSGGQP 82 (194)
Q Consensus 4 ~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~ 82 (194)
..+.|+ ++.++.+.+.+|.|+.+|+.+++. ...... .........++++.| .....++.+.+||.++.+.+
T Consensus 58 qGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv-----~~~~l~--~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 58 QGLVFH-QGHFFESTGHQGTLRQLSLESAQP-----VWMERL--GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEECCSSCSSC-----SEEEEC--TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEE
T ss_pred ceEEEE-CCEEEEEcCCCCEEEEEECCCCcE-----EeEECC--CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEE
Confidence 456776 356777778888999999998864 222211 223332223334444 44556889999999999998
Q ss_pred EEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecCC--------eEEEEecCCCEEEEEcCCCcEEE
Q 039044 83 VTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD--------RCYALTVRYPLMVVGTADRNLVV 154 (194)
Q Consensus 83 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~dg~v~~ 154 (194)
.++... ..-..++ ++++.|+.+..++.|.++|..+.+.+.++.... +.+.+. +|+..+..-.+..|.+
T Consensus 130 ~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~v 205 (268)
T 3nok_A 130 RTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLE 205 (268)
T ss_dssp EEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEE
T ss_pred EEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEE
Confidence 888743 2223444 567777777779999999999999887766522 234444 6654444446788999
Q ss_pred EECCCCCeeeEEeeC-----------CCcceeeEEEEecCCCeeEEEE
Q 039044 155 FNLQNPQTEFKRINS-----------PLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 155 ~d~~~~~~~~~~~~~-----------~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
.|.++++..-..-.. ......+.|+++|+++.|.+.-
T Consensus 206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 999998743221111 1123568999999877766654
No 230
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.21 E-value=4.7e-08 Score=65.06 Aligned_cols=178 Identities=7% Similarity=-0.039 Sum_probs=112.9
Q ss_pred eeEEEcCCCCEEEEeeCC--CeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeE-EEecCCCeEEEEecCCCC
Q 039044 4 SSLCFSPKANILVATSWD--NQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV-FSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 4 ~~~~~~p~~~~l~~~~~d--~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~ 80 (194)
..+.|++ +.++.+.+.+ +.|+.+|+.+++. .... .-..........+.++.| .....++.+.+||.++.+
T Consensus 24 qGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv-----~~~~-~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 24 EGLFYLR-GHLYESTGETGRSSVRKVDLETGRI-----LQRA-EVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp EEEEEET-TEEEEEECCTTSCEEEEEETTTCCE-----EEEE-ECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTE
T ss_pred ccEEEEC-CEEEEECCCCCCceEEEEECCCCCE-----EEEE-eCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCc
Confidence 4677876 5556666654 4899999998753 1111 112222223233334444 445578999999999999
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecCC--------eEEEEecCCCEEEEEcCCCcE
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD--------RCYALTVRYPLMVVGTADRNL 152 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~dg~v 152 (194)
.+.++.... .-..++ +++..|+.+..++.|.++|..+.+.+.++.... +.+.+. +++..+..-.+..|
T Consensus 97 ~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I 172 (243)
T 3mbr_X 97 PRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRI 172 (243)
T ss_dssp EEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEE
T ss_pred EEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeE
Confidence 888887433 334454 466767666678999999999998887766521 233333 55544444457789
Q ss_pred EEEECCCCCeeeEEeeC-----------CCcceeeEEEEecCCCeeEEEEe
Q 039044 153 VVFNLQNPQTEFKRINS-----------PLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 153 ~~~d~~~~~~~~~~~~~-----------~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
.+.|.++++..-..-.. +.....+.|+++|+++.|.+...
T Consensus 173 ~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 173 ARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 99999998743222111 12235689999998877776543
No 231
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.20 E-value=1.4e-09 Score=76.74 Aligned_cols=171 Identities=10% Similarity=0.105 Sum_probs=107.0
Q ss_pred CeeeEEEcCCCCEEEEeeC--CCeEEEEecccCCccccccc---ccccCCCCCeeEEEEecCCCeEEEecC-----CCeE
Q 039044 2 SVSSLCFSPKANILVATSW--DNQVRCWEISRGGTGVASVP---KASISHDHPVLCSTWKDDGTTVFSGGC-----DKQV 71 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~~-----d~~i 71 (194)
.+..++++|+++++++... ++.++||.+..+.. ...+ .....+-..+..++++++++++++-.. ++.|
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~--~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL--IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE--EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe--ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 4678999999999888642 34356666653211 1000 111234567899999999876665433 5789
Q ss_pred EEEecCCCCceEEecc------CCCcEEEEEecCCC-CEEEEee---CCCeEEEEeCCCCCceeEEecCC----eEEEEe
Q 039044 72 KMWPLLSGGQPVTVAM------HDAPIKEVAWIPEM-NLLATGS---WDKTLKYWDTRQPNPVHTQQLPD----RCYALT 137 (194)
Q Consensus 72 ~~~d~~~~~~~~~~~~------~~~~v~~~~~~~~~-~~l~~~~---~d~~v~vwd~~~~~~~~~~~~~~----~~~~~~ 137 (194)
.+||+.+++.+..+.. +...+..+++++++ ..+++-. .++.|.+||+.+++.......+. ....+.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 9999998876665542 22356899999864 4445544 67899999998877655443210 013344
Q ss_pred cCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 138 VRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 138 ~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
+++..+.+.+.++.+..|. ..+..++|+|+|+.|.++
T Consensus 176 ~~g~~~~~~~~~g~~~~~~----------------~~~~gia~s~dg~~ly~~ 212 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPH----------------LGVNGIVLDAENEWLYLS 212 (343)
T ss_dssp ETTEECBEECTTSCEECCC----------------CCEEEEEECTTSCEEEEE
T ss_pred ECCEEEEeccCCCceecee----------------cccceeEeccCCCEEEEE
Confidence 5565555566666554332 124667888888766654
No 232
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.18 E-value=7.3e-12 Score=89.31 Aligned_cols=169 Identities=11% Similarity=0.030 Sum_probs=84.5
Q ss_pred eEEEcCCCCEEEEeeCCCeEEEEecccCCccccccccc-ccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCceE
Q 039044 5 SLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKA-SISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPV 83 (194)
Q Consensus 5 ~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 83 (194)
+..+.+++..+++++.|+.|+.||..+++......... ......++. . ++..+++++.++.++.||.++|+.+.
T Consensus 42 s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~----~-~~~~v~~g~~dg~v~a~D~~tG~~~w 116 (369)
T 2hz6_A 42 QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCR----S-SDGILYMGKKQDIWYVIDLLTGEKQQ 116 (369)
T ss_dssp CCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC----------CCCCEEEEEEEEECCC------
T ss_pred ecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceE----e-cCCEEEEEeCCCEEEEEECCCCcEEE
Confidence 33344567778888899999999997764311000000 000111111 1 34567788889999999999999887
Q ss_pred EeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecCC-eEEEEecCC---CEEEEEcCCCcEEEEECCC
Q 039044 84 TVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD-RCYALTVRY---PLMVVGTADRNLVVFNLQN 159 (194)
Q Consensus 84 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~-~~~~~~~~~---~~l~~~~~dg~v~~~d~~~ 159 (194)
.+..+. ...++|++..+++++.|+.|+.||.++++.+....... ....+..+. ..+++++.+|.++.||.++
T Consensus 117 ~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~t 192 (369)
T 2hz6_A 117 TLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDYAASLPEDDVDYKMSHFVSNGDGLVVTVDSES 192 (369)
T ss_dssp --------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEECCBCCCCCTTCCCCEEEEETSCEEEEECTTT
T ss_pred EecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccccCccccCCccccceEEEECCCCEEEEEECCC
Confidence 766443 23456788889999999999999999998765544321 122233321 5677888999999999999
Q ss_pred CCeeeEEeeCCCcceee-EEEEecCCC
Q 039044 160 PQTEFKRINSPLKYQTR-CVAAFPDQQ 185 (194)
Q Consensus 160 ~~~~~~~~~~~~~~~v~-~i~~~p~~~ 185 (194)
++...... ...++. ...++++|.
T Consensus 193 G~~~W~~~---~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 193 GDVLWIQN---YASPVVAFYVWQREGL 216 (369)
T ss_dssp CCEEEEEE---CSSCEEEEEECTTSSC
T ss_pred CcEEEEec---CCCceEEEEEecCCce
Confidence 88654433 223333 345556664
No 233
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.17 E-value=1.3e-07 Score=63.66 Aligned_cols=184 Identities=13% Similarity=0.112 Sum_probs=113.5
Q ss_pred CeeeEEEcCCCC-EEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 2 SVSSLCFSPKAN-ILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 2 ~v~~~~~~p~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
.+..++|+|++. ++++...++.|...|.. +.. .......-....-.+++.+++.++++.-.++.+.++++....
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v----~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDL----IRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETT-CCE----EEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCE----EEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 477899999765 44556777888888876 321 111111223567788999888877776677889999886654
Q ss_pred ce---EEec------cCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCC---CCCceeEEe----------cCCeEEEEec
Q 039044 81 QP---VTVA------MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTR---QPNPVHTQQ----------LPDRCYALTV 138 (194)
Q Consensus 81 ~~---~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~---~~~~~~~~~----------~~~~~~~~~~ 138 (194)
.+ .... ..+.....++|+|.++.|+++.......+|.+. ....+.... .....++++|
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp 182 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQ 182 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEET
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcC
Confidence 32 2221 234556899999988777766654444444433 111122111 1336889998
Q ss_pred CCC-EEEEEcCCCcEEEEECCCCCeeeEEeeCCC------cceeeEEEEecCCCeeEEE
Q 039044 139 RYP-LMVVGTADRNLVVFNLQNPQTEFKRINSPL------KYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 139 ~~~-~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~------~~~v~~i~~~p~~~~l~~~ 190 (194)
... +++....+..+..+|..........+..+. -.+...|+|.|+|..++++
T Consensus 183 ~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 183 QKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp TTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred CCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc
Confidence 654 455556677789999875433333333221 1266899999999877664
No 234
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.10 E-value=8.9e-09 Score=73.18 Aligned_cols=176 Identities=8% Similarity=-0.151 Sum_probs=107.7
Q ss_pred eEEEcCCCCEEEEee----------CCCeEEEEecccCCcccccccccccCC-------CCCeeEEEEecCCCeEEEecC
Q 039044 5 SLCFSPKANILVATS----------WDNQVRCWEISRGGTGVASVPKASISH-------DHPVLCSTWKDDGTTVFSGGC 67 (194)
Q Consensus 5 ~~~~~p~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~ 67 (194)
.++++||++.++++. .++.|.+||..+.+. ....... ......+.++|||++++.+..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v-----v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~ 143 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP-----IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLF 143 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE-----EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEEC
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE-----EEEEECCCccccccCCCcceEEEcCCCCEEEEEcc
Confidence 589999999888886 368899999988753 1121111 123567899999999998864
Q ss_pred --CCeEEE--EecCCCCceEEecc---------C---------CCcEEEEEe--------------------------cC
Q 039044 68 --DKQVKM--WPLLSGGQPVTVAM---------H---------DAPIKEVAW--------------------------IP 99 (194)
Q Consensus 68 --d~~i~~--~d~~~~~~~~~~~~---------~---------~~~v~~~~~--------------------------~~ 99 (194)
+..+.+ +|..+ +.++.. + .+.+..+.. .+
T Consensus 144 ~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~ 220 (368)
T 1mda_H 144 GSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQAN 220 (368)
T ss_dssp SSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEET
T ss_pred CCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccc
Confidence 467888 88855 222210 0 000000100 23
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCC--ceeEEe-------------cCCeEEEEecCCCEEEEEcC-C--------CcEEEE
Q 039044 100 EMNLLATGSWDKTLKYWDTRQPN--PVHTQQ-------------LPDRCYALTVRYPLMVVGTA-D--------RNLVVF 155 (194)
Q Consensus 100 ~~~~l~~~~~d~~v~vwd~~~~~--~~~~~~-------------~~~~~~~~~~~~~~l~~~~~-d--------g~v~~~ 155 (194)
++..++..+. +.+.+.|+...+ .+.... .....+.++++++.++.+.. + +.+.++
T Consensus 221 ~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~Vi 299 (368)
T 1mda_H 221 YPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSV 299 (368)
T ss_dssp TTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEE
T ss_pred cCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEE
Confidence 3334444444 677777875432 111111 11223789999998887643 2 357799
Q ss_pred ECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 156 NLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 156 d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
|+.+.+. ...+. .......+.|+|||+.++++..
T Consensus 300 D~~t~~v-v~~i~--vg~~p~gi~~s~Dg~~l~va~~ 333 (368)
T 1mda_H 300 TASVGQT-SGPIS--NGHDSDAIIAAQDGASDNYANS 333 (368)
T ss_dssp ESSSCCE-EECCE--EEEEECEEEECCSSSCEEEEEE
T ss_pred ECCCCeE-EEEEE--CCCCcceEEECCCCCEEEEEcc
Confidence 9998764 33332 2336899999999997666554
No 235
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.10 E-value=3.9e-07 Score=61.89 Aligned_cols=177 Identities=5% Similarity=-0.058 Sum_probs=106.9
Q ss_pred CeeeEEEcCCCCEEE-EeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecC---CCeEEEEecC
Q 039044 2 SVSSLCFSPKANILV-ATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGC---DKQVKMWPLL 77 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~~i~~~d~~ 77 (194)
....++++|++..|+ +-...+.|.+++++.... .............++++|++..|+.+.. .+.|..+++.
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-----~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-----RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-----EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC
Confidence 356889999765554 444567899998865421 1111112245689999997666555543 4688888876
Q ss_pred CCCceEEe-ccCCCcEEEEEecCCCCEEEE-eeCCCeEEEEeCCCCCceeEEecCCeEEEEecCCCEEEEEc-CCCcEEE
Q 039044 78 SGGQPVTV-AMHDAPIKEVAWIPEMNLLAT-GSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGT-ADRNLVV 154 (194)
Q Consensus 78 ~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~-~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~v~~ 154 (194)
... ...+ .........+++++++..|.. -...+.|.++|+.................+.+++..++.+. .++.|..
T Consensus 155 g~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~ 233 (267)
T 1npe_A 155 GTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIA 233 (267)
T ss_dssp SCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEE
T ss_pred CCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEE
Confidence 433 3333 223356789999997665544 44568999999875433222222122223344455665555 4678999
Q ss_pred EECCCCCeeeEEeeCCCcceeeEEEEecCCC
Q 039044 155 FNLQNPQTEFKRINSPLKYQTRCVAAFPDQQ 185 (194)
Q Consensus 155 ~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~ 185 (194)
+|..+++. ...+..+.......+++.|++-
T Consensus 234 ~d~~~g~~-~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 234 MDLAISKE-MDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EETTTTEE-EEEECCSSCCCCCCEEEECSCC
T ss_pred EeCCCCCc-eEEEccccccccceeeecCccC
Confidence 99987763 3333322222468888888864
No 236
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.08 E-value=2e-07 Score=65.08 Aligned_cols=185 Identities=10% Similarity=0.026 Sum_probs=113.4
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccc--------------cccCCCCCeeEEEEec-CCCeEEEecC
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPK--------------ASISHDHPVLCSTWKD-DGTTVFSGGC 67 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~--------------~~~~~~~~i~~~~~~~-~~~~l~~~~~ 67 (194)
..+++|+++++++.++..++.|..|+............. ...........+++.+ +++ |+.+..
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d~ 99 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVDC 99 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEET
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEEC
Confidence 357889999987888888999999987654321000000 0000113478899998 555 454544
Q ss_pred CCeEEEEecCCCCceEEecc-----CCCcEEEEEecC-CCCEEEEeeC-----------------CCeEEEEeCCCCCce
Q 039044 68 DKQVKMWPLLSGGQPVTVAM-----HDAPIKEVAWIP-EMNLLATGSW-----------------DKTLKYWDTRQPNPV 124 (194)
Q Consensus 68 d~~i~~~d~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~v~vwd~~~~~~~ 124 (194)
.+.+..+|..++.. ..+.. .......+++.+ +|++.++-.. ++.|..+|..+++..
T Consensus 100 ~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 100 YYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 45588888765432 22211 123578899999 9987665432 367888998765532
Q ss_pred eEE--ecCCeEEEEecCCCEEEEE-cCCCcEEEEECCCCCe-eeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 125 HTQ--QLPDRCYALTVRYPLMVVG-TADRNLVVFNLQNPQT-EFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 125 ~~~--~~~~~~~~~~~~~~~l~~~-~~dg~v~~~d~~~~~~-~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
... ......++++++++.|+.+ +..+.|..|++..... ....... ..+ ...+++.++|..+++..
T Consensus 179 ~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 179 LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEE
T ss_pred EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEec
Confidence 211 1234678999999876655 5568899999875321 1111111 123 67889999998766653
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.06 E-value=3.3e-09 Score=78.86 Aligned_cols=184 Identities=11% Similarity=0.044 Sum_probs=116.7
Q ss_pred eeeEEE-c-CCCCEEEEeeC------------------CCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeE
Q 039044 3 VSSLCF-S-PKANILVATSW------------------DNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV 62 (194)
Q Consensus 3 v~~~~~-~-p~~~~l~~~~~------------------d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 62 (194)
...+++ . |++++++++++ ++.+.+.|..+.+. ..+..-. +....++++|+|+++
T Consensus 136 phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v-----~~qI~Vg-g~pd~~~~spdGk~~ 209 (595)
T 1fwx_A 136 IHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEV-----AWQVLVS-GNLDNCDADYEGKWA 209 (595)
T ss_dssp EEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEE-----EEEEEES-SCCCCEEECSSSSEE
T ss_pred CcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeE-----EEEEEeC-CCccceEECCCCCEE
Confidence 456776 4 89999888852 35678888776532 1111111 134567788999988
Q ss_pred EEecCCC--------------------------------------eEEEEecCC--CCc-eEEeccCCCcEEEEEecCCC
Q 039044 63 FSGGCDK--------------------------------------QVKMWPLLS--GGQ-PVTVAMHDAPIKEVAWIPEM 101 (194)
Q Consensus 63 ~~~~~d~--------------------------------------~i~~~d~~~--~~~-~~~~~~~~~~v~~~~~~~~~ 101 (194)
++.+.+. .|.+.|.++ ++. +..+.. .....++.++|||
T Consensus 210 ~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDG 288 (595)
T 1fwx_A 210 FSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDK 288 (595)
T ss_dssp EEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTS
T ss_pred EEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCC
Confidence 8777543 366677766 444 334432 2356789999999
Q ss_pred CEEEEee-CCCeEEEEeCCCCC------------ceeEEe--cCCeEEEEecCCCEEEEEcCCCcEEEEECCCC------
Q 039044 102 NLLATGS-WDKTLKYWDTRQPN------------PVHTQQ--LPDRCYALTVRYPLMVVGTADRNLVVFNLQNP------ 160 (194)
Q Consensus 102 ~~l~~~~-~d~~v~vwd~~~~~------------~~~~~~--~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~------ 160 (194)
+++++++ .+.+|.++|+.+.+ ...... .....++|+++|....+.-.|++|.+||+.+.
T Consensus 289 k~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g 368 (595)
T 1fwx_A 289 KHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAG 368 (595)
T ss_dssp SEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHT
T ss_pred CEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcc
Confidence 9877665 57899999998642 122222 23468899999944445666999999998762
Q ss_pred ---CeeeEEeeCC----CcceeeEEEEecCCCeeEEEEee
Q 039044 161 ---QTEFKRINSP----LKYQTRCVAAFPDQQGFLVCIHL 193 (194)
Q Consensus 161 ---~~~~~~~~~~----~~~~v~~i~~~p~~~~l~~~~~~ 193 (194)
.....++... |...-..+.++|||++|+++-.+
T Consensus 369 ~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~ 408 (595)
T 1fwx_A 369 EKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKF 408 (595)
T ss_dssp CSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESC
T ss_pred cccceeEEEeecccccccceeccceEeCCCCCEEEEcCCC
Confidence 1223333221 11222345678999999987654
No 238
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.05 E-value=6.3e-07 Score=60.89 Aligned_cols=176 Identities=5% Similarity=-0.096 Sum_probs=106.0
Q ss_pred CEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEE-EecCCCeEEEEecCCCCceEEeccCCCc
Q 039044 13 NILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVF-SGGCDKQVKMWPLLSGGQPVTVAMHDAP 91 (194)
Q Consensus 13 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 91 (194)
++|+.+.. +.|+.++++...................+..++|+++++.|+ +-..++.|..++...+.....+......
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 45555553 478888887653211000011111224567999999766555 4455789999998765543333333357
Q ss_pred EEEEEecCCCCE-EEEeeCCCeEEEEeCCCCCceeEEe---cCCeEEEEecCCCEEEEEcC---CCcEEEEECCCCCeee
Q 039044 92 IKEVAWIPEMNL-LATGSWDKTLKYWDTRQPNPVHTQQ---LPDRCYALTVRYPLMVVGTA---DRNLVVFNLQNPQTEF 164 (194)
Q Consensus 92 v~~~~~~~~~~~-l~~~~~d~~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~---dg~v~~~d~~~~~~~~ 164 (194)
...+++++++.. +++-...+.|.++++.......... .....++++|++..|+.+.. .+.|..+++......
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~- 159 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR- 159 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE-
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE-
Confidence 889999996554 4444557899999987543222221 23467899997666665554 367888888653321
Q ss_pred EEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 165 KRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 165 ~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
......-.....++++|++..|.++-
T Consensus 160 -~~~~~~~~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 160 -ILAQDNLGLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp -EEECTTCSCEEEEEEETTTTEEEEEE
T ss_pred -EEEECCCCCCcEEEEcCCCCEEEEEE
Confidence 22111224568999999887776553
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.05 E-value=2.6e-08 Score=74.19 Aligned_cols=173 Identities=10% Similarity=-0.002 Sum_probs=119.1
Q ss_pred CCCEEEEeeC-CCeEEEEecccCCcccccccc-cccCCCCCeeEEEE-e-cCCCeEEEec------------------CC
Q 039044 11 KANILVATSW-DNQVRCWEISRGGTGVASVPK-ASISHDHPVLCSTW-K-DDGTTVFSGG------------------CD 68 (194)
Q Consensus 11 ~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~-~-~~~~~l~~~~------------------~d 68 (194)
||++++.... +..|.+.|+.+.+. .. ...........+++ . |+++++++++ .+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~-----~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~ 174 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKC-----DAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYV 174 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEE-----EEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceE-----eeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccC
Confidence 6777776655 56799999988753 11 12233345778887 5 8999998884 34
Q ss_pred CeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCC-------------------------------------
Q 039044 69 KQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDK------------------------------------- 111 (194)
Q Consensus 69 ~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------------------------------------- 111 (194)
+.+.+.|..+.+....+.... ....++++|+|+++++.+.+.
T Consensus 175 ~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 175 NVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred ceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 679999999887776665322 456788999999988887543
Q ss_pred -eEEEEeCCC--CCc-eeEEec--CCeEEEEecCCCEEEEEcC-CCcEEEEECCCCCe----------eeEEeeCCCcce
Q 039044 112 -TLKYWDTRQ--PNP-VHTQQL--PDRCYALTVRYPLMVVGTA-DRNLVVFNLQNPQT----------EFKRINSPLKYQ 174 (194)
Q Consensus 112 -~v~vwd~~~--~~~-~~~~~~--~~~~~~~~~~~~~l~~~~~-dg~v~~~d~~~~~~----------~~~~~~~~~~~~ 174 (194)
.|.+.|.++ ++. +..+.. ....+.++|||+++++++. +.+|.++|+.+.+. .... .......
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~-~v~vG~g 332 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA-EPELGLG 332 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE-CCBCCSC
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEE-EcCCCCC
Confidence 377888887 444 444443 4568999999998777664 78899999996421 1111 1223455
Q ss_pred eeEEEEecCCCeeEEEE
Q 039044 175 TRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 175 v~~i~~~p~~~~l~~~~ 191 (194)
.+.++|+|+| .+.+..
T Consensus 333 P~h~aF~~dG-~aY~t~ 348 (595)
T 1fwx_A 333 PLHTAFDGRG-NAYTSL 348 (595)
T ss_dssp EEEEEECTTS-EEEEEE
T ss_pred cceEEECCCC-eEEEEE
Confidence 7999999999 555443
No 240
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.98 E-value=1.1e-07 Score=73.99 Aligned_cols=112 Identities=15% Similarity=0.065 Sum_probs=74.3
Q ss_pred eeeEEEc-CCCCEEEEeeC-C----CeEEEEecccC-CcccccccccccCCCCCeeEEEEecCCCeEEEecCC-----Ce
Q 039044 3 VSSLCFS-PKANILVATSW-D----NQVRCWEISRG-GTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCD-----KQ 70 (194)
Q Consensus 3 v~~~~~~-p~~~~l~~~~~-d----~~i~i~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~ 70 (194)
+...+|+ |||++||-+.. + .+|+++|+.++ +. ....+ ......+.|+||++.|+....+ ..
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~----l~~~~---~~~~~~~~WspDg~~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT----IADKV---SGTNGEIVWGPDHTSLFYVTKDETLRENK 248 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC----CCCCE---EEECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe----CCccc---cCceeeEEEecCCCEEEEEEECCCCCCCE
Confidence 5678999 99998875432 2 35999999876 42 11111 1123568999999888766654 35
Q ss_pred EEEEecCCCCce--EEec-cCCCcEEEEEecCCCCEEEEeeC---CCeEEEEeCCCC
Q 039044 71 VKMWPLLSGGQP--VTVA-MHDAPIKEVAWIPEMNLLATGSW---DKTLKYWDTRQP 121 (194)
Q Consensus 71 i~~~d~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~~---d~~v~vwd~~~~ 121 (194)
|..+++.++... ..+. ........+.|+|+|++|+..+. ...|.++|+.++
T Consensus 249 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 249 VWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 888888776432 2222 22344668899999998876653 346888999875
No 241
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.98 E-value=2.6e-07 Score=70.90 Aligned_cols=184 Identities=11% Similarity=0.141 Sum_probs=115.7
Q ss_pred eEEEcCCCCEEEEeeCCCe-------------------EEEEecccCCcccccccccccCCC-------CCeeEEEEecC
Q 039044 5 SLCFSPKANILVATSWDNQ-------------------VRCWEISRGGTGVASVPKASISHD-------HPVLCSTWKDD 58 (194)
Q Consensus 5 ~~~~~p~~~~l~~~~~d~~-------------------i~i~~~~~~~~~~~~~~~~~~~~~-------~~i~~~~~~~~ 58 (194)
.+++.|+..+++.+..++. |..+|..+++..- ......|. .+.....+..+
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W---~~~~~~~~~wd~~~~~~~~~~d~~~~ 310 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAW---HYQVTPGDSWDFTATQQITLAELNID 310 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEE---EEESSTTCCSCCCCCSCEEEEEEEET
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceee---EeecCCCccccccCCCCcEEEEeccC
Confidence 4678888888888877763 8888888875311 11111121 23333344446
Q ss_pred CC---eEEEecCCCeEEEEecCCCCceEEeccCC------------CcE------------------------EEEEecC
Q 039044 59 GT---TVFSGGCDKQVKMWPLLSGGQPVTVAMHD------------API------------------------KEVAWIP 99 (194)
Q Consensus 59 ~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~~~------------~~v------------------------~~~~~~~ 99 (194)
++ .++.++.+|.++++|.++|+.+....... .++ ..++++|
T Consensus 311 G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp 390 (668)
T 1kv9_A 311 GKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNP 390 (668)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEET
T ss_pred CcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECC
Confidence 65 68899999999999999998774332111 000 1256777
Q ss_pred CCCEEEEe------------------------------------eCCCeEEEEeCCCCCceeEEecCC--eEEEEecCCC
Q 039044 100 EMNLLATG------------------------------------SWDKTLKYWDTRQPNPVHTQQLPD--RCYALTVRYP 141 (194)
Q Consensus 100 ~~~~l~~~------------------------------------~~d~~v~vwd~~~~~~~~~~~~~~--~~~~~~~~~~ 141 (194)
+..++... ..+|.|..||+.+++.+-+..... ....+...+.
T Consensus 391 ~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg 470 (668)
T 1kv9_A 391 GTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGN 470 (668)
T ss_dssp TTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTT
T ss_pred CCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCC
Confidence 65554431 124789999999999876665432 2345566788
Q ss_pred EEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 142 LMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 142 ~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
.++.++.||.++.||.++++....... +......-+.+..+|+.+++..+
T Consensus 471 ~vf~g~~dg~l~a~d~~tG~~l~~~~~-~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 471 LVFQGTAAGQMHAYSADKGEALWQFEA-QSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEEC-SSCCCSCCEEEEETTEEEEEEEE
T ss_pred EEEEECCcccchhhhhhcChhheEecC-CCCcccCceEEEECCEEEEEEEe
Confidence 999999999999999999886544332 22212233455567775554444
No 242
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.97 E-value=2.8e-08 Score=70.60 Aligned_cols=91 Identities=7% Similarity=-0.080 Sum_probs=68.8
Q ss_pred eEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEec----------CCCeEEEEecCCCCceEEeccC----
Q 039044 23 QVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGG----------CDKQVKMWPLLSGGQPVTVAMH---- 88 (194)
Q Consensus 23 ~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----------~d~~i~~~d~~~~~~~~~~~~~---- 88 (194)
+|.++|..+.+. ...+.....+ .+.++||+++++.+. .++.|.+||+.+++.+.++...
T Consensus 47 ~vsvID~~t~~v-----~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~ 119 (368)
T 1mda_H 47 ENWVSCAGCGVT-----LGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPR 119 (368)
T ss_dssp EEEEEETTTTEE-----EEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCS
T ss_pred eEEEEECCCCeE-----EEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccc
Confidence 788999887742 2333222334 799999999998886 4688999999999998887533
Q ss_pred ---CCcEEEEEecCCCCEEEEeeC--CCeEEE--EeCCC
Q 039044 89 ---DAPIKEVAWIPEMNLLATGSW--DKTLKY--WDTRQ 120 (194)
Q Consensus 89 ---~~~v~~~~~~~~~~~l~~~~~--d~~v~v--wd~~~ 120 (194)
......++++|+|++++++.. +..+.+ +|+.+
T Consensus 120 ~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 120 FSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred cccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 123568999999999998864 467888 98865
No 243
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.94 E-value=3.2e-07 Score=62.14 Aligned_cols=135 Identities=11% Similarity=0.016 Sum_probs=93.2
Q ss_pred CeeEEEEecCCCeEEEecC--CCeEEEEecCCCCceEEeccCC-CcEEEEEecCCCCEEE-EeeCCCeEEEEeCCCCCce
Q 039044 49 PVLCSTWKDDGTTVFSGGC--DKQVKMWPLLSGGQPVTVAMHD-APIKEVAWIPEMNLLA-TGSWDKTLKYWDTRQPNPV 124 (194)
Q Consensus 49 ~i~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~-~~~~d~~v~vwd~~~~~~~ 124 (194)
....+.|+|++.++++.+. ++.|+++|+.+++.+..+.... .....+++. +..|. +.-.++.+.++|..+.+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 3579999998755555443 6799999999999887764222 223355554 44444 4446789999999999988
Q ss_pred eEEecC-CeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCC-Ccc---eeeEEEEecCCCee
Q 039044 125 HTQQLP-DRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSP-LKY---QTRCVAAFPDQQGF 187 (194)
Q Consensus 125 ~~~~~~-~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~-~~~---~v~~i~~~p~~~~l 187 (194)
.++... ...+.++++++.++++..++.|.++|..+.+.. ..+.-. ... .++.+.|. +|+.+
T Consensus 100 ~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~-~~I~Vg~~~~p~~~~nele~~-dg~ly 165 (266)
T 2iwa_A 100 KNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLI-KKHNVKYNGHRVIRLNELEYI-NGEVW 165 (266)
T ss_dssp EEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEE-EEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEE-EEEEECCCCcccccceeEEEE-CCEEE
Confidence 888765 556778889988888778889999999887643 233221 111 25677777 66443
No 244
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.93 E-value=2.5e-07 Score=62.22 Aligned_cols=134 Identities=12% Similarity=0.010 Sum_probs=94.4
Q ss_pred CeeEEEEecCCCeEEEecCCCeEEEEecCCCCceEEeccCCCcE--EEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeE
Q 039044 49 PVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPI--KEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHT 126 (194)
Q Consensus 49 ~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~ 126 (194)
....+.|+ ++.++.+.+.+|.|+++|+++++.+..+ -. ... ..+++..+ +.....-.++.+.+||..+.+.+.+
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSS-CEEEEESSSCEEEEEETTTTEEEEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCC-EEEEEEccCCEEEEEECCcCcEEEE
Confidence 34788887 4567778888899999999999988876 22 233 33555433 3344445689999999999999999
Q ss_pred EecCCeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeC-CCcc---eeeEEEEecCCCeeE
Q 039044 127 QQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINS-PLKY---QTRCVAAFPDQQGFL 188 (194)
Q Consensus 127 ~~~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~-~~~~---~v~~i~~~p~~~~l~ 188 (194)
+......+.++++++.|+.+..++.|+++|..+.+.. ..+.- .... .++.+.|. +|+.++
T Consensus 132 i~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~-~~I~V~~~g~~v~~lNeLe~~-dG~lya 195 (268)
T 3nok_A 132 TRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALV-GAVQVKLRGQPVELINELECA-NGVIYA 195 (268)
T ss_dssp EECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEE-EEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEE-EEEEeCCCCcccccccccEEe-CCEEEE
Confidence 9887766777888999888888899999999987643 22221 1111 23556665 665443
No 245
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.90 E-value=2.3e-07 Score=62.31 Aligned_cols=110 Identities=10% Similarity=0.049 Sum_probs=84.1
Q ss_pred CeeEEEEecCCCeEEEecCCC--eEEEEecCCCCceEEeccCCCcEE--EEEecCCCCEEEEe-eCCCeEEEEeCCCCCc
Q 039044 49 PVLCSTWKDDGTTVFSGGCDK--QVKMWPLLSGGQPVTVAMHDAPIK--EVAWIPEMNLLATG-SWDKTLKYWDTRQPNP 123 (194)
Q Consensus 49 ~i~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~~-~~d~~v~vwd~~~~~~ 123 (194)
....+.|+ ++.++.+.+.+| .|+.+|+++++.+..+.-. .... .++. ++..|... -.++.+.++|..+.+.
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~ 119 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQ 119 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEE--ETTEEEEEESSSSEEEEEETTTCCE
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEE--eCCEEEEEEeeCCEEEEEECccCcE
Confidence 34789998 666666777766 8999999999988876533 2332 3444 34444444 4588999999999999
Q ss_pred eeEEecCCeEEEEecCCCEEEEEcCCCcEEEEECCCCCe
Q 039044 124 VHTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQT 162 (194)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~ 162 (194)
+.++..+...+.+++++..|+....++.|+++|..+.+.
T Consensus 120 ~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v 158 (262)
T 3nol_A 120 VRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTP 158 (262)
T ss_dssp EEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSE
T ss_pred EEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeE
Confidence 999988777778888898888877788899999998764
No 246
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.84 E-value=2.4e-06 Score=59.29 Aligned_cols=178 Identities=11% Similarity=0.071 Sum_probs=103.4
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCC--CeEEEEecCCCC
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCD--KQVKMWPLLSGG 80 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d--~~i~~~d~~~~~ 80 (194)
...++|+|+++++++-..++.|..|+...... ...........+++.++++++++.... ..|..++..+++
T Consensus 34 pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~-------~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHEVGEIVSITPDGNQQ-------IHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTCCEE-------EEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred cceEEECCCCCEEEEeCCCCeEEEECCCCceE-------EEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence 46789999998777766788998888764311 111223468899999999866655332 246667776665
Q ss_pred ceEEec-cCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC-ceeEE-------e--cC-CeEEEEecCCCEEEEEc-
Q 039044 81 QPVTVA-MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN-PVHTQ-------Q--LP-DRCYALTVRYPLMVVGT- 147 (194)
Q Consensus 81 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~-~~~~~-------~--~~-~~~~~~~~~~~~l~~~~- 147 (194)
...... ........++..+++..+++-..++.|..+|...++ .+... . .. ...-.++++++.|+.+.
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~ 186 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT 186 (306)
T ss_dssp EEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET
T ss_pred EEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeC
Confidence 432221 122234555555555545554458899999986542 11100 0 00 11222388887666554
Q ss_pred CCCcEEEEECCC-CCe-eeEEeeCCCcceeeEEEEecCCCeeEE
Q 039044 148 ADRNLVVFNLQN-PQT-EFKRINSPLKYQTRCVAAFPDQQGFLV 189 (194)
Q Consensus 148 ~dg~v~~~d~~~-~~~-~~~~~~~~~~~~v~~i~~~p~~~~l~~ 189 (194)
..+.|..|++.. ++. ....... ......++++++|..+++
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~~--~~~P~gi~vd~dG~l~va 228 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFVE--QTNIDDFAFDVEGNLYGA 228 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEEE--SCCCSSEEEBTTCCEEEE
T ss_pred CCCEEEEEEeCCCCCCCccEEEec--cCCCCCeEECCCCCEEEE
Confidence 577899999874 221 0111111 123577888888876554
No 247
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.83 E-value=4.2e-06 Score=63.20 Aligned_cols=183 Identities=15% Similarity=0.111 Sum_probs=112.4
Q ss_pred EEEcCCCCEEEEeeC--------------------C----CeEEEEecccCCcccccccccccCC--------CCCeeEE
Q 039044 6 LCFSPKANILVATSW--------------------D----NQVRCWEISRGGTGVASVPKASISH--------DHPVLCS 53 (194)
Q Consensus 6 ~~~~p~~~~l~~~~~--------------------d----~~i~i~~~~~~~~~~~~~~~~~~~~--------~~~i~~~ 53 (194)
+++.|+..+++.+.. | +.|..+|..+++..- ......| ..++. +
T Consensus 251 ~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W---~~q~~~~d~wd~~~~~~p~l-~ 326 (582)
T 1flg_A 251 ASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW---FYQHTPNDAWDFSGNNELVL-F 326 (582)
T ss_dssp CEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE---EEESSTTCCSCCCCCCCCEE-E
T ss_pred ceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE---EEeCCCCCcccccCCCCcEE-E
Confidence 466677677776653 2 578889988875411 1111112 12221 2
Q ss_pred EEe-cCCC---eEEEecCCCeEEEEecCCCCceEEeccCC-------------CcE------------------------
Q 039044 54 TWK-DDGT---TVFSGGCDKQVKMWPLLSGGQPVTVAMHD-------------API------------------------ 92 (194)
Q Consensus 54 ~~~-~~~~---~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-------------~~v------------------------ 92 (194)
... .+|+ .++.++.+|.++++|.++++.+..+.... .++
T Consensus 327 ~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P 406 (582)
T 1flg_A 327 DYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSP 406 (582)
T ss_dssp EEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESS
T ss_pred eeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECc
Confidence 222 4664 78889999999999999998876543221 000
Q ss_pred --------EEEEecCCCCEEEEee---------------------------------CCCeEEEEeCCCCCceeEEecCC
Q 039044 93 --------KEVAWIPEMNLLATGS---------------------------------WDKTLKYWDTRQPNPVHTQQLPD 131 (194)
Q Consensus 93 --------~~~~~~~~~~~l~~~~---------------------------------~d~~v~vwd~~~~~~~~~~~~~~ 131 (194)
..++++|+..++++.. .+|.|.-||+.+++.+-+.....
T Consensus 407 ~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~ 486 (582)
T 1flg_A 407 PFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL 486 (582)
T ss_dssp CTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS
T ss_pred CCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC
Confidence 1245566544444322 25789999999999876655432
Q ss_pred --eEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEee
Q 039044 132 --RCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIHL 193 (194)
Q Consensus 132 --~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~~ 193 (194)
..-.+...+..++.++.||.++.||.++++...+... +......-+.+..+|+.+++...+
T Consensus 487 ~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~-~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 487 PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT-GSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC-SSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecC-CCCcccCceEEEECCEEEEEEEcc
Confidence 1222334567888899999999999999987655432 222222346677888876665443
No 248
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.82 E-value=3.6e-06 Score=63.47 Aligned_cols=183 Identities=13% Similarity=0.053 Sum_probs=113.0
Q ss_pred EEEcCCCCEEEEeeCC----------------CeEEEEecccCCcccccccccccCC--------CCCeeEEEEecCCC-
Q 039044 6 LCFSPKANILVATSWD----------------NQVRCWEISRGGTGVASVPKASISH--------DHPVLCSTWKDDGT- 60 (194)
Q Consensus 6 ~~~~p~~~~l~~~~~d----------------~~i~i~~~~~~~~~~~~~~~~~~~~--------~~~i~~~~~~~~~~- 60 (194)
+++.|+...++.+..+ +.|..+|..+++..- ......| ..++. +...++|+
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W---~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~ 315 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKW---GYQKTPHDEWDFAGVNQMVL-TDQPVNGKM 315 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEE---EEESSTTCSSCCCCCCCCEE-EEEEETTEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEE---EecCCCCcccccccCCCCEE-EecccCCcE
Confidence 4566666666665532 358888888775311 1111111 12222 23334674
Q ss_pred --eEEEecCCCeEEEEecCCCCceEEeccCC-------------CcE--------------------------EEEEecC
Q 039044 61 --TVFSGGCDKQVKMWPLLSGGQPVTVAMHD-------------API--------------------------KEVAWIP 99 (194)
Q Consensus 61 --~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-------------~~v--------------------------~~~~~~~ 99 (194)
.++.++.+|.+.++|.++++.+....... .++ ..++++|
T Consensus 316 ~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp 395 (571)
T 2ad6_A 316 TPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDP 395 (571)
T ss_dssp EEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET
T ss_pred EEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECC
Confidence 57788999999999999998876553211 111 2356777
Q ss_pred CCCEEEEee-------------------------------------CCCeEEEEeCCCCCceeEEecCC--eEEEEecCC
Q 039044 100 EMNLLATGS-------------------------------------WDKTLKYWDTRQPNPVHTQQLPD--RCYALTVRY 140 (194)
Q Consensus 100 ~~~~l~~~~-------------------------------------~d~~v~vwd~~~~~~~~~~~~~~--~~~~~~~~~ 140 (194)
+..+++... .++.|..||..+++.+-+..... ....+...+
T Consensus 396 ~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~g 475 (571)
T 2ad6_A 396 ESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKG 475 (571)
T ss_dssp TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETT
T ss_pred CCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECC
Confidence 766665543 35789999999999877665432 222334456
Q ss_pred CEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEee
Q 039044 141 PLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIHL 193 (194)
Q Consensus 141 ~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~~ 193 (194)
..++.++.||.|+.+|.++++....... +....-..+.+.++|+.++....+
T Consensus 476 g~v~~g~~dg~l~a~D~~tG~~lw~~~~-~~~~~~~p~~~~~~G~~yv~~~~G 527 (571)
T 2ad6_A 476 GLVWYATLDGYLKALDNKDGKELWNFKM-PSGGIGSPMTYSFKGKQYIGSMYG 527 (571)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEEC-SSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CEEEEEcCCCeEEEEECCCCCEEEEEeC-CCCcEeeeEEEEECCEEEEEEECC
Confidence 7788899999999999999986554432 222222334566888877766544
No 249
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.80 E-value=6.7e-06 Score=62.26 Aligned_cols=183 Identities=13% Similarity=0.074 Sum_probs=112.6
Q ss_pred EEEcCCCCEEEEeeCC----------------CeEEEEecccCCcccccccccccCC--------CCCeeEEEEe-cCC-
Q 039044 6 LCFSPKANILVATSWD----------------NQVRCWEISRGGTGVASVPKASISH--------DHPVLCSTWK-DDG- 59 (194)
Q Consensus 6 ~~~~p~~~~l~~~~~d----------------~~i~i~~~~~~~~~~~~~~~~~~~~--------~~~i~~~~~~-~~~- 59 (194)
+++.++..+++.+..+ +.|..+|..+++..- ......| ..++. +... .+|
T Consensus 246 ~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W---~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~ 321 (599)
T 1w6s_A 246 YAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKF---GYQKTPHDEWDYAGVNVMML-SEQKDKDGK 321 (599)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEE---EEESSTTCSSCCCCCCCCEE-EEEECTTSC
T ss_pred eeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceee---EeecCCCccccccCCCccEE-EeccccCCc
Confidence 4556667777777655 378888888775311 1111122 12222 2222 467
Q ss_pred --CeEEEecCCCeEEEEecCCCCceEEeccCC-------------CcE--------------------------EEEEec
Q 039044 60 --TTVFSGGCDKQVKMWPLLSGGQPVTVAMHD-------------API--------------------------KEVAWI 98 (194)
Q Consensus 60 --~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-------------~~v--------------------------~~~~~~ 98 (194)
..++.++.+|.+.++|.++++.+....... .++ ..++++
T Consensus 322 ~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~d 401 (599)
T 1w6s_A 322 ARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYD 401 (599)
T ss_dssp EEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEE
T ss_pred EEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCC
Confidence 467788999999999999998876543111 111 134566
Q ss_pred CCCCEEEEe---------------------------------e------CCCeEEEEeCCCCCceeEEecCC--eEEEEe
Q 039044 99 PEMNLLATG---------------------------------S------WDKTLKYWDTRQPNPVHTQQLPD--RCYALT 137 (194)
Q Consensus 99 ~~~~~l~~~---------------------------------~------~d~~v~vwd~~~~~~~~~~~~~~--~~~~~~ 137 (194)
|+..++++. + ..|.|.-||+.+++.+-+..... ..-.+.
T Consensus 402 p~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~ 481 (599)
T 1w6s_A 402 PKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMA 481 (599)
T ss_dssp TTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEE
T ss_pred CCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceE
Confidence 655444332 1 34789999999999876665432 212244
Q ss_pred cCCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEee
Q 039044 138 VRYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIHL 193 (194)
Q Consensus 138 ~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~~ 193 (194)
..+..++.++.||.++.||.++++...+... +......-+.+..+|+.+++...+
T Consensus 482 tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l-~~g~~~~P~~y~~~G~qyv~~~~G 536 (599)
T 1w6s_A 482 TAGDLVFYGTLDGYLKARDSDTGDLLWKFKI-PSGAIGYPMTYTHKGTQYVAIYYG 536 (599)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCCEEEEEEC-SSCCCSCCEEEEETTEEEEEEEEC
T ss_pred ecCCEEEEECCCCeEEEEECCCCCEEEEeeC-CCCcEeccEEEEeCCEEEEEEEcc
Confidence 4677888899999999999999987665432 222233446667888876665443
No 250
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.76 E-value=2.7e-06 Score=60.59 Aligned_cols=150 Identities=13% Similarity=0.091 Sum_probs=95.8
Q ss_pred CCCEEEEeeCCCeEEEEecccCCcccccccccccCC-------CCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCceE
Q 039044 11 KANILVATSWDNQVRCWEISRGGTGVASVPKASISH-------DHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPV 83 (194)
Q Consensus 11 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~-------~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 83 (194)
.+..+++++.++.|..+|..+++..-. ...... ...+.+. ...++..++.++.++.|..+|.++++.+.
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W 127 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWS---VSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAW 127 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEE---EECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeee---ecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEE
Confidence 356788888899999999987753110 111000 1222221 22245678888889999999999998877
Q ss_pred EeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecCCeEE------EEecCCCEEEEEcCCCcEEEEEC
Q 039044 84 TVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCY------ALTVRYPLMVVGTADRNLVVFNL 157 (194)
Q Consensus 84 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~dg~v~~~d~ 157 (194)
.............. .+..++.++.++.|..+|.++++.+.......... .....+..++.++.++.+..+|.
T Consensus 128 ~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 128 QTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp EEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTEEEEEET
T ss_pred EEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEEC
Confidence 66533222111122 23467778889999999999999877665532211 11112457888888999999999
Q ss_pred CCCCeeeEE
Q 039044 158 QNPQTEFKR 166 (194)
Q Consensus 158 ~~~~~~~~~ 166 (194)
.+++.....
T Consensus 206 ~tG~~~w~~ 214 (376)
T 3q7m_A 206 EQGQMIWQQ 214 (376)
T ss_dssp TTCCEEEEE
T ss_pred CCCcEEEEE
Confidence 988765443
No 251
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.74 E-value=5.3e-07 Score=62.86 Aligned_cols=171 Identities=12% Similarity=0.041 Sum_probs=107.5
Q ss_pred eeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCceE
Q 039044 4 SSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPV 83 (194)
Q Consensus 4 ~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 83 (194)
.++...+++. +..++.++.|..+|.. +.. ..........+.++...+++..++. + +.+..+| .+++...
T Consensus 140 ~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~-----~~~~~~~~~~~~~~~~d~~g~l~v~-t--~~l~~~d-~~g~~~~ 208 (330)
T 3hxj_A 140 ATPIVSEDGT-IYVGSNDNYLYAINPD-GTE-----KWRFKTNDAITSAASIGKDGTIYFG-S--DKVYAIN-PDGTEKW 208 (330)
T ss_dssp SCCEECTTSC-EEEECTTSEEEEECTT-SCE-----EEEEECSSCCCSCCEECTTCCEEEE-S--SSEEEEC-TTSCEEE
T ss_pred eeeEEcCCCE-EEEEcCCCEEEEECCC-CCE-----eEEEecCCCceeeeEEcCCCEEEEE-e--CEEEEEC-CCCcEEE
Confidence 3445555555 5567778889999987 432 1112223445667777777765544 4 7799999 7777766
Q ss_pred EeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecCC---eEEEEecCCCEEEEEcCCCcEEEEECCCC
Q 039044 84 TVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD---RCYALTVRYPLMVVGTADRNLVVFNLQNP 160 (194)
Q Consensus 84 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~dg~v~~~d~~~~ 160 (194)
.+......+.++...+++. +..++.++.|..+|. +++.+....... ..+.+..++ .|..++.+|.|..+|. ++
T Consensus 209 ~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g 284 (330)
T 3hxj_A 209 NFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DG 284 (330)
T ss_dssp EECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TS
T ss_pred EEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CC
Confidence 6665556788888888775 445666888888874 455554444322 233444444 5777888888999996 44
Q ss_pred CeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 161 QTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 161 ~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
+.... ... ....+.++...++|+.++.+.
T Consensus 285 ~~~~~-~~~-~~~~~~~~~~d~~g~l~~gt~ 313 (330)
T 3hxj_A 285 TEKWN-FET-GSWIIATPVIDENGTIYFGTR 313 (330)
T ss_dssp CEEEE-EEC-SSCCCSCCEECTTCCEEEECT
T ss_pred cEEEE-EEc-CCccccceEEcCCCEEEEEcC
Confidence 43322 222 234567777778887776543
No 252
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.73 E-value=6.2e-07 Score=68.93 Aligned_cols=145 Identities=11% Similarity=0.068 Sum_probs=98.4
Q ss_pred CEEEEeeCCCeEEEEecccCCccccccccc------ccCCCCC------------------------eeEEEEecCCCeE
Q 039044 13 NILVATSWDNQVRCWEISRGGTGVASVPKA------SISHDHP------------------------VLCSTWKDDGTTV 62 (194)
Q Consensus 13 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~------~~~~~~~------------------------i~~~~~~~~~~~l 62 (194)
..++.++.+|.++++|..+++......... ......+ -..++++|+..++
T Consensus 328 ~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~ 407 (677)
T 1kb0_A 328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLV 407 (677)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEE
T ss_pred eEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEE
Confidence 678899999999999998875311100000 0000000 1257889988888
Q ss_pred EEecC-------------------------------------------CCeEEEEecCCCCceEEeccCCCcEEEEEecC
Q 039044 63 FSGGC-------------------------------------------DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIP 99 (194)
Q Consensus 63 ~~~~~-------------------------------------------d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 99 (194)
++... .|.|..||+.+++.+..+. +..++....+..
T Consensus 408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~ 486 (677)
T 1kb0_A 408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTT 486 (677)
T ss_dssp EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEE
T ss_pred EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEe
Confidence 77543 2789999999998887765 333444455666
Q ss_pred CCCEEEEeeCCCeEEEEeCCCCCceeEEecCC----eEEEEecCCCE-EEEEcC----------------CCcEEEEECC
Q 039044 100 EMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD----RCYALTVRYPL-MVVGTA----------------DRNLVVFNLQ 158 (194)
Q Consensus 100 ~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~----~~~~~~~~~~~-l~~~~~----------------dg~v~~~d~~ 158 (194)
.+..++.++.|+.+++||.++++.+.++..+. ..+.+..+|+. ++..+. .+.+..|.+.
T Consensus 487 ~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~ 566 (677)
T 1kb0_A 487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVG 566 (677)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEET
T ss_pred CCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEecc
Confidence 77788889999999999999999999887654 45666778864 443222 3567777776
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.69 E-value=2.1e-05 Score=54.51 Aligned_cols=181 Identities=13% Similarity=-0.020 Sum_probs=103.3
Q ss_pred eeeEEEcCCCCEEEEeeCC-C-eEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 3 VSSLCFSPKANILVATSWD-N-QVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d-~-~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
+..+++.|+++++++.... + .|..++..++.. ...... ........++..+++..+++-..++.|..+|...++
T Consensus 74 p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~---~~~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 74 VSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV---ETLLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE---EEEEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred ceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE---EEEEeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCc
Confidence 5678999999866655432 2 355556554432 101111 112223445555555445555568889999876542
Q ss_pred c-eEEec---------cCCCcEEEEEecCCCCEEEEe-eCCCeEEEEeCCC-CCc--eeEE--ecCCeEEEEecCCCEEE
Q 039044 81 Q-PVTVA---------MHDAPIKEVAWIPEMNLLATG-SWDKTLKYWDTRQ-PNP--VHTQ--QLPDRCYALTVRYPLMV 144 (194)
Q Consensus 81 ~-~~~~~---------~~~~~v~~~~~~~~~~~l~~~-~~d~~v~vwd~~~-~~~--~~~~--~~~~~~~~~~~~~~~l~ 144 (194)
. +.... ..-...+.+ +|+++.|..+ ...+.|..+|+.. ++. ...+ ......++++++|+..+
T Consensus 150 ~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~v 227 (306)
T 2p4o_A 150 GSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYG 227 (306)
T ss_dssp EEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEE
T ss_pred EeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEE
Confidence 1 11100 111234556 7777665544 4578999999874 321 1111 12345789999998777
Q ss_pred EEcCCCcEEEEECCCCCeeeE-EeeCCCcceeeEEEEe---cCCCeeEEEE
Q 039044 145 VGTADRNLVVFNLQNPQTEFK-RINSPLKYQTRCVAAF---PDQQGFLVCI 191 (194)
Q Consensus 145 ~~~~dg~v~~~d~~~~~~~~~-~~~~~~~~~v~~i~~~---p~~~~l~~~~ 191 (194)
+....+.|.++|.. ++.... ....+ -....+++|. |+++.|.++.
T Consensus 228 a~~~~~~V~~~~~~-G~~~~~~~~~~~-~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 228 ATHIYNSVVRIAPD-RSTTIIAQAEQG-VIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp ECBTTCCEEEECTT-CCEEEEECGGGT-CTTEEEEEECCSTTTTTEEEEEE
T ss_pred EeCCCCeEEEECCC-CCEEEEeecccc-cCCceEEEEecccCCCCEEEEEC
Confidence 77677889999975 332111 12111 2457899998 8987777654
No 254
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.69 E-value=6.5e-06 Score=54.86 Aligned_cols=113 Identities=12% Similarity=0.006 Sum_probs=83.9
Q ss_pred CCeeEEEEecCCCeEEEecCC--CeEEEEecCCCCceEEeccCCC-cEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce
Q 039044 48 HPVLCSTWKDDGTTVFSGGCD--KQVKMWPLLSGGQPVTVAMHDA-PIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV 124 (194)
Q Consensus 48 ~~i~~~~~~~~~~~l~~~~~d--~~i~~~d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~ 124 (194)
.....+.|++ +.++.+.+.+ ..|+.+|+++++.+..+..... .-..++... ++.....-.++.+.++|..+.+.+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECCcCcEE
Confidence 4567899986 5556666665 4899999999998887653222 123344432 334444456899999999999999
Q ss_pred eEEecCCeEEEEecCCCEEEEEcCCCcEEEEECCCCCe
Q 039044 125 HTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQNPQT 162 (194)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~ 162 (194)
.++..+...+.+++++..|+.+..++.|.++|..+.+.
T Consensus 99 ~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~ 136 (243)
T 3mbr_X 99 ARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQ 136 (243)
T ss_dssp EEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCE
T ss_pred EEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeE
Confidence 99988777778888888888888888999999998764
No 255
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.66 E-value=9e-06 Score=62.68 Aligned_cols=150 Identities=13% Similarity=0.107 Sum_probs=94.8
Q ss_pred CCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeE-EEEecCCCeEEEec------CCCeEEEEecCCCCceEE
Q 039044 12 ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLC-STWKDDGTTVFSGG------CDKQVKMWPLLSGGQPVT 84 (194)
Q Consensus 12 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~------~d~~i~~~d~~~~~~~~~ 84 (194)
+..++.++.|+.|..+|..+++..-.............+.+ ..+ .++ .++.+. .++.|..||.++|+.+..
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRV-VNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEE-ECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 56788888999999999988764111100000000011110 011 144 444443 378999999999998876
Q ss_pred eccCC-------------------------------CcEEEEEecCCCCEEEEeeCCC-------------------eEE
Q 039044 85 VAMHD-------------------------------APIKEVAWIPEMNLLATGSWDK-------------------TLK 114 (194)
Q Consensus 85 ~~~~~-------------------------------~~v~~~~~~~~~~~l~~~~~d~-------------------~v~ 114 (194)
+.... .....+++.|+...++.+..++ .|.
T Consensus 199 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~ 278 (689)
T 1yiq_A 199 FYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIV 278 (689)
T ss_dssp EESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEE
T ss_pred ecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 64210 0012577888888888887765 399
Q ss_pred EEeCCCCCceeEEecCC------------eEEEEecCCC---EEEEEcCCCcEEEEECCCCCee
Q 039044 115 YWDTRQPNPVHTQQLPD------------RCYALTVRYP---LMVVGTADRNLVVFNLQNPQTE 163 (194)
Q Consensus 115 vwd~~~~~~~~~~~~~~------------~~~~~~~~~~---~l~~~~~dg~v~~~d~~~~~~~ 163 (194)
.+|.++++.+-.++... ....+..+++ .++.++.+|.++++|.++++..
T Consensus 279 AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 279 AVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp EEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence 99999999886665310 1112333554 7889999999999999998754
No 256
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.65 E-value=3.8e-06 Score=61.15 Aligned_cols=149 Identities=9% Similarity=0.033 Sum_probs=94.9
Q ss_pred eeeEEEcC-CCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecC-CC----eEEEEec
Q 039044 3 VSSLCFSP-KANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGC-DK----QVKMWPL 76 (194)
Q Consensus 3 v~~~~~~p-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~----~i~~~d~ 76 (194)
...++++| ++..|+.+...+.|+.+|+..... ..+.........++|++++++|+.+.. ++ .+..++.
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v------~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV------STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEE------EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEE------EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 45789998 455666666557888888876531 222234556889999999996666544 22 3444443
Q ss_pred CCCCce--EEeccCCCcEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCCceeEEec----CCeEEEEecCCCEEEEE-cC
Q 039044 77 LSGGQP--VTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVHTQQL----PDRCYALTVRYPLMVVG-TA 148 (194)
Q Consensus 77 ~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~-~~ 148 (194)
.+... ..+. .......++++| ++.++++-..++.|..++...+........ ....++++|++++|+.+ ..
T Consensus 213 -~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 213 -ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp -GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred -CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 33222 2222 233457788999 677666666778999999886553222222 24679999999965554 45
Q ss_pred CCcEEEEECCC
Q 039044 149 DRNLVVFNLQN 159 (194)
Q Consensus 149 dg~v~~~d~~~ 159 (194)
.+.|..++...
T Consensus 291 ~~~I~~~~~d~ 301 (430)
T 3tc9_A 291 QHYILRSDYDW 301 (430)
T ss_dssp TTEEEEEEEET
T ss_pred CCEEEEEeCCc
Confidence 77899887653
No 257
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.63 E-value=3.9e-06 Score=58.45 Aligned_cols=162 Identities=12% Similarity=0.048 Sum_probs=100.1
Q ss_pred CCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCceEEeccCCCc
Q 039044 12 ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAP 91 (194)
Q Consensus 12 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 91 (194)
+..+..++.++.+..+|.. +.. ..........+.++...+++. +..++.++.+..+|.. ++....+......
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~-----~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~ 178 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTE-----KWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAI 178 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCE-----EEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCC
T ss_pred CCEEEEEecCCEEEEEcCC-CCE-----EEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCc
Confidence 4567777888889999877 432 111222333455666666666 5667778999999988 7776666655566
Q ss_pred EEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecC---CeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEee
Q 039044 92 IKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP---DRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRIN 168 (194)
Q Consensus 92 v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~ 168 (194)
+.++...+++.+.+.. +.|..+| .+++........ ...+...+++ .+..++.++.+..+|.. ++.... ..
T Consensus 179 ~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~~gl~~~~~~-g~~~~~-~~ 251 (330)
T 3hxj_A 179 TSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDG-TIYVTSLDGHLYAINPD-GTEKWR-FK 251 (330)
T ss_dssp CSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTS-CEEEEETTTEEEEECTT-SCEEEE-EE
T ss_pred eeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCC-eEEEEcCCCeEEEECCC-CCEeEE-ee
Confidence 7777777777755544 8899999 677766555433 3455666666 45666667778888753 333222 22
Q ss_pred CCCcceeeEEEEecCCCeeEE
Q 039044 169 SPLKYQTRCVAAFPDQQGFLV 189 (194)
Q Consensus 169 ~~~~~~v~~i~~~p~~~~l~~ 189 (194)
. ....+..+.+.+++...+.
T Consensus 252 ~-~~~~~~~~~~~~~g~l~v~ 271 (330)
T 3hxj_A 252 T-GKRIESSPVIGNTDTIYFG 271 (330)
T ss_dssp C-SSCCCSCCEECTTSCEEEE
T ss_pred C-CCCccccceEcCCCeEEEe
Confidence 1 1222344555556654443
No 258
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.62 E-value=3.7e-05 Score=53.49 Aligned_cols=156 Identities=8% Similarity=0.027 Sum_probs=104.4
Q ss_pred eeEEEcCCCCEEEEee-CCCeEEEEecccCCcccccccccc--cCCCCCeeEEEE---ecCCCeEEEec-----------
Q 039044 4 SSLCFSPKANILVATS-WDNQVRCWEISRGGTGVASVPKAS--ISHDHPVLCSTW---KDDGTTVFSGG----------- 66 (194)
Q Consensus 4 ~~~~~~p~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~---~~~~~~l~~~~----------- 66 (194)
.+++|++....|..++ ..++|..|+...+........... ......+..+.| .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 3678988655666555 689999999875432111000000 011124589999 68877776543
Q ss_pred --CCCeEEEEecC---CCCceEEec--c-----------CCCcEEEEEecCCCCEEEEeeCC-CeEEEEeCCCCCceeEE
Q 039044 67 --CDKQVKMWPLL---SGGQPVTVA--M-----------HDAPIKEVAWIPEMNLLATGSWD-KTLKYWDTRQPNPVHTQ 127 (194)
Q Consensus 67 --~d~~i~~~d~~---~~~~~~~~~--~-----------~~~~v~~~~~~~~~~~l~~~~~d-~~v~vwd~~~~~~~~~~ 127 (194)
.+..|..||+. +++.+.... . -.....+++..++|+..++.+.. +.|...+..... +..+
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~-~~~~ 174 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT-VSTF 174 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC-EEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE-Eeee
Confidence 26779999998 777665432 1 11348899999999999988888 888877766442 2221
Q ss_pred e--c-------CCeEEEEecCCCEEEEEcCCCcEEEEECCCC
Q 039044 128 Q--L-------PDRCYALTVRYPLMVVGTADRNLVVFNLQNP 160 (194)
Q Consensus 128 ~--~-------~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~ 160 (194)
. . ..+.+++.|++..|++....|.+.-+|++..
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 1 1 1248899999999888877999999999854
No 259
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.61 E-value=1.8e-05 Score=55.23 Aligned_cols=179 Identities=7% Similarity=-0.010 Sum_probs=102.5
Q ss_pred eeeEEEcC-CCCEEEEeeCCCeEEEEecccCCccccccccccc-CCCCCeeEEEEec-CCCeEEEecC------------
Q 039044 3 VSSLCFSP-KANILVATSWDNQVRCWEISRGGTGVASVPKASI-SHDHPVLCSTWKD-DGTTVFSGGC------------ 67 (194)
Q Consensus 3 v~~~~~~p-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~l~~~~~------------ 67 (194)
+..+++.+ +++ |+.+...+.+..++...+... ....... ........+++.+ +|+..++-..
T Consensus 82 p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 82 TYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHAT--QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp EEEEEEETTTTE-EEEEETTTEEEEECTTCEECE--EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEE--EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceeh
Confidence 56788998 555 554544455777876543210 0000011 1123467899999 8987666432
Q ss_pred -----CCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEe-eCCCeEEEEeCCCCC-----ceeEEecCCeEEEE
Q 039044 68 -----DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATG-SWDKTLKYWDTRQPN-----PVHTQQLPDRCYAL 136 (194)
Q Consensus 68 -----d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~vwd~~~~~-----~~~~~~~~~~~~~~ 136 (194)
++.|..+|..+++...... .......++++|++++|..+ ...+.|.+|++.... ....... ...+++
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~ 236 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKR 236 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEE
T ss_pred cccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEE
Confidence 3678888876654322222 22345679999999866555 556899999987532 1111122 456788
Q ss_pred ecCCCEEEEEcC----------CCcEEEEECCCCCeeeEEeeCCC---cceeeEEEEecCCCeeEE
Q 039044 137 TVRYPLMVVGTA----------DRNLVVFNLQNPQTEFKRINSPL---KYQTRCVAAFPDQQGFLV 189 (194)
Q Consensus 137 ~~~~~~l~~~~~----------dg~v~~~d~~~~~~~~~~~~~~~---~~~v~~i~~~p~~~~l~~ 189 (194)
+++|++.++... .+.|..+|.. ++. ...+..+. -..+..+.+ .+++.+++
T Consensus 237 d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~-~~~~~~~~g~~~~~~~~~~~-~~g~L~v~ 299 (322)
T 2fp8_A 237 NADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNI-LEVIPLPPPFAGEHFEQIQE-HDGLLYIG 299 (322)
T ss_dssp CTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCE-EEEEECCTTTTTSCCCEEEE-ETTEEEEE
T ss_pred CCCCCEEEEecCcccccccCCCccEEEEECCC-CCE-EEEEECCCCCccccceEEEE-eCCEEEEe
Confidence 899986666544 4568888875 332 23332221 234566665 45555444
No 260
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.60 E-value=1.3e-06 Score=67.92 Aligned_cols=137 Identities=9% Similarity=0.033 Sum_probs=84.1
Q ss_pred CeeEEEEe-cCCCeEEEecC-C----CeEEEEecCCC-CceE-EeccCCCcEEEEEecCCCCEEEEeeCC-----CeEEE
Q 039044 49 PVLCSTWK-DDGTTVFSGGC-D----KQVKMWPLLSG-GQPV-TVAMHDAPIKEVAWIPEMNLLATGSWD-----KTLKY 115 (194)
Q Consensus 49 ~i~~~~~~-~~~~~l~~~~~-d----~~i~~~d~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~v 115 (194)
.+....|+ |||++|+-+.. + ..|+++|+.++ +.+. .+. .....++|+|+|+.|+....+ ..|..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57789999 99998874432 2 35999999988 6321 111 123568999999888877665 36888
Q ss_pred EeCCCCCce--eEEe--cC--CeEEEEecCCCEEEEEcC---CCcEEEEECCCCCeee--EEeeCCCcceeeEEEEecCC
Q 039044 116 WDTRQPNPV--HTQQ--LP--DRCYALTVRYPLMVVGTA---DRNLVVFNLQNPQTEF--KRINSPLKYQTRCVAAFPDQ 184 (194)
Q Consensus 116 wd~~~~~~~--~~~~--~~--~~~~~~~~~~~~l~~~~~---dg~v~~~d~~~~~~~~--~~~~~~~~~~v~~i~~~p~~ 184 (194)
+++.+++.. ..+. .. ...+.++|++++|+..+. ...|+++|+.++.... ..+.........++.|+. |
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-T 330 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-T
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-C
Confidence 888775421 2221 11 245689999998887653 3458889998753222 333322233334444433 5
Q ss_pred CeeEE
Q 039044 185 QGFLV 189 (194)
Q Consensus 185 ~~l~~ 189 (194)
+.|+.
T Consensus 331 ~~l~~ 335 (751)
T 2xe4_A 331 SHLVI 335 (751)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 54443
No 261
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.59 E-value=3.8e-05 Score=53.88 Aligned_cols=174 Identities=9% Similarity=0.113 Sum_probs=106.5
Q ss_pred CCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecC----CC---eEEEecC---CCeEEEEecC-CCC
Q 039044 12 ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDD----GT---TVFSGGC---DKQVKMWPLL-SGG 80 (194)
Q Consensus 12 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----~~---~l~~~~~---d~~i~~~d~~-~~~ 80 (194)
..+++...+.+-+.+||+ .++. ...+. .+.++.+..-|+ ++ ++++... ++.|.+|++. ...
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~-----l~~~~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~ 111 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKM-----LHSYN--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG 111 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCE-----EEEEC--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC
T ss_pred ccEEEEEcCCCCEEEEcC-CCcE-----EEEcc--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC
Confidence 456666677888999999 4432 22222 256777777763 22 2333333 5789999773 222
Q ss_pred ceEEecc------CC-CcEEEEEe--cCC-CC-EEEEeeCCCeEEEEeCC---C----CCceeEEecCC--eEEEEecCC
Q 039044 81 QPVTVAM------HD-APIKEVAW--IPE-MN-LLATGSWDKTLKYWDTR---Q----PNPVHTQQLPD--RCYALTVRY 140 (194)
Q Consensus 81 ~~~~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~d~~v~vwd~~---~----~~~~~~~~~~~--~~~~~~~~~ 140 (194)
.+..+.. .. ..+..+++ +|. +. ++++...+|.+..|++. . .+.+.++.... ..+...+..
T Consensus 112 ~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~ 191 (355)
T 3amr_A 112 TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEY 191 (355)
T ss_dssp CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTT
T ss_pred ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCC
Confidence 3444421 11 56677888 663 44 67788889999999883 2 23456665543 466777888
Q ss_pred CEEEEEcCCCcEEEEECCCCC----eeeEEee-CCCcceeeEEEE--ecCCC-eeEEEEee
Q 039044 141 PLMVVGTADRNLVVFNLQNPQ----TEFKRIN-SPLKYQTRCVAA--FPDQQ-GFLVCIHL 193 (194)
Q Consensus 141 ~~l~~~~~dg~v~~~d~~~~~----~~~~~~~-~~~~~~v~~i~~--~p~~~-~l~~~~~~ 193 (194)
..|+.+-++.-|..++.+... ....... ......+..|++ .++++ +|++++++
T Consensus 192 g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG 252 (355)
T 3amr_A 192 GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQG 252 (355)
T ss_dssp TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGG
T ss_pred CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCC
Confidence 899999998777777755221 1222221 223346788888 45666 67777754
No 262
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.56 E-value=1.7e-05 Score=60.88 Aligned_cols=182 Identities=11% Similarity=0.042 Sum_probs=105.2
Q ss_pred eEEEcCCCCEEEEeeC-CCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEec-CC-----CeEEEEecC
Q 039044 5 SLCFSPKANILVATSW-DNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGG-CD-----KQVKMWPLL 77 (194)
Q Consensus 5 ~~~~~p~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-----~~i~~~d~~ 77 (194)
++++.+++++++.|+. +..+.+||..+..- ...... .....-.++...++++.++.|+ .+ ..+.+||..
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W---~~~~~~-~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSW---IPGPDM-QVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEE---EECCCC-SSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCce---eECCCC-CccccccceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 3567788999999984 45799999876532 111111 1122223556667888888888 34 468889886
Q ss_pred CCCceEE-------------------------eccCCC---------------------------------------cEE
Q 039044 78 SGGQPVT-------------------------VAMHDA---------------------------------------PIK 93 (194)
Q Consensus 78 ~~~~~~~-------------------------~~~~~~---------------------------------------~v~ 93 (194)
+.+-... +-+..+ .-.
T Consensus 323 t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~ 402 (656)
T 1k3i_A 323 SKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGN 402 (656)
T ss_dssp TTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCE
T ss_pred CCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCc
Confidence 5431110 000000 012
Q ss_pred EEEecC-CCCEEEEeeCCC-----------eEEEEeCCCCCceeEE--ecC----CeEEEEecCCCEEEEEcCC------
Q 039044 94 EVAWIP-EMNLLATGSWDK-----------TLKYWDTRQPNPVHTQ--QLP----DRCYALTVRYPLMVVGTAD------ 149 (194)
Q Consensus 94 ~~~~~~-~~~~l~~~~~d~-----------~v~vwd~~~~~~~~~~--~~~----~~~~~~~~~~~~l~~~~~d------ 149 (194)
++.|.. ++++++.|+.++ .+.+||..+.+..... ..+ .....+.++++.++.|+.+
T Consensus 403 av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~ 482 (656)
T 1k3i_A 403 AVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFE 482 (656)
T ss_dssp EEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTC
T ss_pred eEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcC
Confidence 223322 667777777532 6778888776644332 222 1245666799999998864
Q ss_pred -----CcEEEEECCCCCeeeEEeeC-CCc-ceeeEEEEecCCCeeEEEEe
Q 039044 150 -----RNLVVFNLQNPQTEFKRINS-PLK-YQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 150 -----g~v~~~d~~~~~~~~~~~~~-~~~-~~v~~i~~~p~~~~l~~~~~ 192 (194)
..+.+||..+.+ ...+.. +.. ....+..+.|+|+.+++|..
T Consensus 483 ~~~~~~~v~~ydp~t~~--W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 483 DSTPVFTPEIYVPEQDT--FYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCSBCCCCEEEEGGGTE--EEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCcccceEEEcCCCCc--eeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 458999998754 222221 111 11234456799999998864
No 263
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.55 E-value=2.2e-05 Score=55.83 Aligned_cols=106 Identities=12% Similarity=0.125 Sum_probs=73.1
Q ss_pred CCeEEEecCCCeEEEEecCCCCceEEeccCCCc-------EEEEEecC--CCCEEEEeeCCCeEEEEeCCCCCceeEEec
Q 039044 59 GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAP-------IKEVAWIP--EMNLLATGSWDKTLKYWDTRQPNPVHTQQL 129 (194)
Q Consensus 59 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~-------v~~~~~~~--~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~ 129 (194)
+..++.+..++.+..+|.++++.+......... +..+...| .+..++.++.++.+..+|.++++.+.....
T Consensus 188 ~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~ 267 (376)
T 3q7m_A 188 FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL 267 (376)
T ss_dssp TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC
Confidence 346778888999999999999887665422110 00011122 345677778899999999999988766654
Q ss_pred CCeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeE
Q 039044 130 PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFK 165 (194)
Q Consensus 130 ~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~ 165 (194)
... .....++..++.++.++.+..+|..+++....
T Consensus 268 ~~~-~~~~~~~~~l~~~~~~g~l~~~d~~tG~~~w~ 302 (376)
T 3q7m_A 268 GSV-NDFIVDGNRIYLVDQNDRVMALTIDGGVTLWT 302 (376)
T ss_dssp CCE-EEEEEETTEEEEEETTCCEEEEETTTCCEEEE
T ss_pred CCC-CCceEECCEEEEEcCCCeEEEEECCCCcEEEe
Confidence 332 23334577888888999999999998875544
No 264
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.55 E-value=7e-05 Score=52.97 Aligned_cols=186 Identities=8% Similarity=0.066 Sum_probs=108.2
Q ss_pred eeEEEcCCCCEEEEee------------CCCeEEEEecccCCccccccccc---ccCCCCCeeEEEEec--CCC-eEEEe
Q 039044 4 SSLCFSPKANILVATS------------WDNQVRCWEISRGGTGVASVPKA---SISHDHPVLCSTWKD--DGT-TVFSG 65 (194)
Q Consensus 4 ~~~~~~p~~~~l~~~~------------~d~~i~i~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~--~~~-~l~~~ 65 (194)
-+++..|+|..+++++ .+|.|.++|..+........... .....-....+.+.+ ++. +|+.+
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv 132 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 132 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence 4677888776555541 68999999987432211111110 111223567777766 343 34444
Q ss_pred c-C--CCeEEEEecCCCCceE----EeccC-CCcEEEEEecCCCCEEEEee-----------------CCCeEEEEeCCC
Q 039044 66 G-C--DKQVKMWPLLSGGQPV----TVAMH-DAPIKEVAWIPEMNLLATGS-----------------WDKTLKYWDTRQ 120 (194)
Q Consensus 66 ~-~--d~~i~~~d~~~~~~~~----~~~~~-~~~v~~~~~~~~~~~l~~~~-----------------~d~~v~vwd~~~ 120 (194)
. . +..|.+|++....... .+.+. -...+++++.++|.+.++.. ..|.|..+|..+
T Consensus 133 nh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~ 212 (355)
T 3sre_A 133 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND 212 (355)
T ss_dssp ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC
T ss_pred ECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCe
Confidence 2 2 4678888876543322 23222 24678999999998777653 124566666532
Q ss_pred CCceeEEecCCeEEEEecCCCEEEEEc-CCCcEEEEECCCC-CeeeEEeeCCCcceeeEEEEec-CCCeeEEE
Q 039044 121 PNPVHTQQLPDRCYALTVRYPLMVVGT-ADRNLVVFNLQNP-QTEFKRINSPLKYQTRCVAAFP-DQQGFLVC 190 (194)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~v~~~d~~~~-~~~~~~~~~~~~~~v~~i~~~p-~~~~l~~~ 190 (194)
-+.+..--...+.++++|+++.++.+. ..+.|+.|++... +....... ...+..-.+++.+ +|...+++
T Consensus 213 ~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 213 VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEe
Confidence 222222223457899999998877665 4678999998642 22111121 2345678899999 58877755
No 265
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.54 E-value=2.1e-05 Score=57.23 Aligned_cols=139 Identities=6% Similarity=-0.018 Sum_probs=88.8
Q ss_pred CeeEEEEec-CCCeEEEecCCCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCC-C----eEEEEeCCCCC
Q 039044 49 PVLCSTWKD-DGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWD-K----TLKYWDTRQPN 122 (194)
Q Consensus 49 ~i~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~----~v~vwd~~~~~ 122 (194)
....++++| ++..|+.+...+.|+.+|+..+.. ..+.........++|++++++|+.+... + .+.+++.. +.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v-~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV-STVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEE-EEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEE-EEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence 457899998 455666666558899999876543 3333345668899999999966666542 1 34444432 32
Q ss_pred ce--eEE--ecCCeEEEEec-CCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 123 PV--HTQ--QLPDRCYALTV-RYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 123 ~~--~~~--~~~~~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
.. ..+ ......++++| ++..+++-..++.|+.++....... .....+.....+.++|+|+|++|.++
T Consensus 216 ~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~-~~~~~~~~~~P~gia~~pdG~~lyv~ 287 (430)
T 3tc9_A 216 FKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT-PLFTIQDSGWEFHIQFHPSGNYAYIV 287 (430)
T ss_dssp SCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE-EEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred eeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEEcCCCCcceeEEEcCCCCEEEEE
Confidence 21 122 22346788999 6666666667888999999865431 11222222446889999999966554
No 266
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.50 E-value=7e-05 Score=52.12 Aligned_cols=143 Identities=6% Similarity=-0.006 Sum_probs=94.9
Q ss_pred CCeeEEEEecCCCeEEEec-CCCeEEEEecCCCCceEEeccC-------CCcEEEEEe---cCCCCEEEEee--------
Q 039044 48 HPVLCSTWKDDGTTVFSGG-CDKQVKMWPLLSGGQPVTVAMH-------DAPIKEVAW---IPEMNLLATGS-------- 108 (194)
Q Consensus 48 ~~i~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~-------~~~v~~~~~---~~~~~~l~~~~-------- 108 (194)
.-..+.+|++....|..++ ..+.|..|+...+......... ...+..+.| .|+++++++..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 3445789988555555555 7899999998755433322111 124689999 68877777543
Q ss_pred -----CCCeEEEEeCC---CCCceeEEec----------------CCeEEEEecCCCEEEEEcCC-CcEEEEECCCCCee
Q 039044 109 -----WDKTLKYWDTR---QPNPVHTQQL----------------PDRCYALTVRYPLMVVGTAD-RNLVVFNLQNPQTE 163 (194)
Q Consensus 109 -----~d~~v~vwd~~---~~~~~~~~~~----------------~~~~~~~~~~~~~l~~~~~d-g~v~~~d~~~~~~~ 163 (194)
.+..|..+|+. +++.+..... ....+++.++|+..++++.. +.|..++.......
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~ 172 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVS 172 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEE
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEe
Confidence 16789999999 7776655442 23578889999999988888 88888777654221
Q ss_pred eEEeeC---CCcceeeEEEEecCCCeeEEE
Q 039044 164 FKRINS---PLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 164 ~~~~~~---~~~~~v~~i~~~p~~~~l~~~ 190 (194)
.-.... ......+.|+++|+|+.|++.
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~ 202 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAF 202 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEE
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEE
Confidence 111111 112235799999999988875
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.48 E-value=6.6e-05 Score=54.71 Aligned_cols=149 Identities=9% Similarity=0.060 Sum_probs=90.3
Q ss_pred eeeEEEcCC--CCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCC---C-eEEEEec
Q 039044 3 VSSLCFSPK--ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCD---K-QVKMWPL 76 (194)
Q Consensus 3 v~~~~~~p~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---~-~i~~~d~ 76 (194)
...++|+|+ ...|+.+...+.|+.++...+.. ............++++++++++++-... . .+...+.
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v------~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYV------DIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEE------EEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECG
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEE------EEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEEC
Confidence 457899984 44455554447888888865532 2222344568899999999944443311 1 2333333
Q ss_pred CCCCce-EEeccCCCcEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCCceeEE-ec----CCeEEEEecCCCEEEEE-cC
Q 039044 77 LSGGQP-VTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVHTQ-QL----PDRCYALTVRYPLMVVG-TA 148 (194)
Q Consensus 77 ~~~~~~-~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~vwd~~~~~~~~~~-~~----~~~~~~~~~~~~~l~~~-~~ 148 (194)
..+... ..+. .......++++| ++.++++-..++.|+.+|..+++....+ .. ....++++|++++|+.+ ..
T Consensus 215 ~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 215 ASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp GGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT
T ss_pred CCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC
Confidence 222111 1222 234456788999 6776666666789999998876652222 11 12359999999965555 45
Q ss_pred CCcEEEEECC
Q 039044 149 DRNLVVFNLQ 158 (194)
Q Consensus 149 dg~v~~~d~~ 158 (194)
.+.|+.++..
T Consensus 294 ~~~I~~~~~d 303 (433)
T 4hw6_A 294 KHCIYRVDYN 303 (433)
T ss_dssp TTEEEEEEBC
T ss_pred CCEEEEEeCC
Confidence 6789998865
No 268
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.47 E-value=4e-05 Score=58.80 Aligned_cols=115 Identities=18% Similarity=0.293 Sum_probs=71.1
Q ss_pred eEEEcC-CCCEEEEeeCCC-----------eEEEEecccCCcccccccccc-cCCCCCeeEEEEecCCCeEEEecC-CCe
Q 039044 5 SLCFSP-KANILVATSWDN-----------QVRCWEISRGGTGVASVPKAS-ISHDHPVLCSTWKDDGTTVFSGGC-DKQ 70 (194)
Q Consensus 5 ~~~~~p-~~~~l~~~~~d~-----------~i~i~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~-d~~ 70 (194)
.+++.| ++++++.|+.+. .+.+||..+..- ...... ..+.....++++.++++.++.|+. +..
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w---~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~ 266 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIV---SDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKK 266 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCB---CCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTC
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcE---EeCcccCCCCCCccccccCCCCCCEEEeCCCCCCc
Confidence 456677 788888887542 578888877642 111111 122333445777889999999884 458
Q ss_pred EEEEecCCCCceEEeccC-CCcEEEEEecCCCCEEEEee-CC-----CeEEEEeCCCCC
Q 039044 71 VKMWPLLSGGQPVTVAMH-DAPIKEVAWIPEMNLLATGS-WD-----KTLKYWDTRQPN 122 (194)
Q Consensus 71 i~~~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~-~d-----~~v~vwd~~~~~ 122 (194)
+.+||..+.+-...-..+ ...-.+++..+++++++.|+ .+ ..+.+||..+.+
T Consensus 267 v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 267 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred eEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 999998765422211111 11123455667888888888 34 468889987543
No 269
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.46 E-value=0.00026 Score=55.55 Aligned_cols=183 Identities=15% Similarity=0.079 Sum_probs=111.3
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccc-cccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCC
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASV-PKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 80 (194)
.|.++...++|. |-.|+.++-|..|+........... .....-....|.++...+++++. .|+.++-|..|+..++.
T Consensus 311 ~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~ 388 (795)
T 4a2l_A 311 SVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQR 388 (795)
T ss_dssp CEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEE-EEESSSCEEEECTTTCC
T ss_pred cEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCc
Confidence 477888888776 4456666678888865542100000 00001134568999988887755 46667679999987654
Q ss_pred ceEEecc--------CCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEe-------cCCeEEEEecCCCEEEE
Q 039044 81 QPVTVAM--------HDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ-------LPDRCYALTVRYPLMVV 145 (194)
Q Consensus 81 ~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~ 145 (194)
...-... ....|.++...++++.|..|+.++.|..+|.++++...-.. ....++...+++.. ..
T Consensus 389 ~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-wi 467 (795)
T 4a2l_A 389 FTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNL-WL 467 (795)
T ss_dssp EEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCE-EE
T ss_pred EEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCE-EE
Confidence 3221111 23578999988888856667777889999988765332211 12234555556654 44
Q ss_pred EcCCCcEEEEECCCCCeeeEEeeC------CCcceeeEEEEecCCCeeEEE
Q 039044 146 GTADRNLVVFNLQNPQTEFKRINS------PLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 146 ~~~dg~v~~~d~~~~~~~~~~~~~------~~~~~v~~i~~~p~~~~l~~~ 190 (194)
|+.+| +..||..+.+. ..... .....|.++...++|...+.+
T Consensus 468 gt~~G-l~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 515 (795)
T 4a2l_A 468 GTLSA-LVRFNPEQRSF--TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG 515 (795)
T ss_dssp EESSC-EEEEETTTTEE--EECCBCTTCCBCCCCCEEEEEECTTCCEEEEE
T ss_pred EecCc-eeEEeCCCCeE--EEccccccccccCCceEEEEEECCCCCEEEEe
Confidence 44444 89999876542 22211 123568889888888776654
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.46 E-value=8.7e-05 Score=49.99 Aligned_cols=152 Identities=6% Similarity=0.057 Sum_probs=96.3
Q ss_pred eeEEEcCCCCEEEEeeCCCeEEEEecccCCccc--ccc--cccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCC-
Q 039044 4 SSLCFSPKANILVATSWDNQVRCWEISRGGTGV--ASV--PKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLS- 78 (194)
Q Consensus 4 ~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~--~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~- 78 (194)
..|++.+++.++++.-.++.+.++++....... ... .......+.....++|+|+++.|+++.......+|.++.
T Consensus 73 EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~ 152 (255)
T 3qqz_A 73 ETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGL 152 (255)
T ss_dssp EEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEEST
T ss_pred HHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEccc
Confidence 467888888766665567789999887654200 011 001123455679999999998888887766666666541
Q ss_pred --CCceEEec-------cCCCcEEEEEecCC-CCEEEEeeCCCeEEEEeCCCCCceeEEecC------------CeEEEE
Q 039044 79 --GGQPVTVA-------MHDAPIKEVAWIPE-MNLLATGSWDKTLKYWDTRQPNPVHTQQLP------------DRCYAL 136 (194)
Q Consensus 79 --~~~~~~~~-------~~~~~v~~~~~~~~-~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~------------~~~~~~ 136 (194)
...+..+. .+...+.+++++|. +++++.+...+.|.++|.. ++.+..+... ...+++
T Consensus 153 ~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~ 231 (255)
T 3qqz_A 153 LSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAM 231 (255)
T ss_dssp TCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEE
T ss_pred ccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEE
Confidence 11122221 12345789999995 5566666677889999966 5555544432 257999
Q ss_pred ecCCCEEEEEcCCCcEEEEEC
Q 039044 137 TVRYPLMVVGTADRNLVVFNL 157 (194)
Q Consensus 137 ~~~~~~l~~~~~dg~v~~~d~ 157 (194)
.++|+ ++..++-..++.|..
T Consensus 232 d~~G~-lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 232 DASGN-IYIVSEPNRFYRFTP 251 (255)
T ss_dssp CTTCC-EEEEETTTEEEEEEC
T ss_pred CCCCC-EEEEcCCceEEEEEe
Confidence 99997 555576666666654
No 271
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.45 E-value=0.00022 Score=55.94 Aligned_cols=183 Identities=12% Similarity=0.066 Sum_probs=109.5
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccc-c-c-cCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCC
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPK-A-S-ISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLS 78 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-~-~-~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 78 (194)
.|.++...+++. |-.|+.++-|..|+..+.......... . . .-....|.++...++++.|..|+.++.+..||.++
T Consensus 358 ~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~ 436 (795)
T 4a2l_A 358 VVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNS 436 (795)
T ss_dssp SEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTT
T ss_pred eeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCC
Confidence 477888887776 445676767888987654321000000 0 0 01245688999888887466677777799999877
Q ss_pred CCceEEec-----cCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEe---------cCCeEEEEecCCCEEE
Q 039044 79 GGQPVTVA-----MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ---------LPDRCYALTVRYPLMV 144 (194)
Q Consensus 79 ~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~---------~~~~~~~~~~~~~~l~ 144 (194)
++. ..+. .....|.++...++|++.+. +. +.|.+||..+++...... ....++...+++...+
T Consensus 437 ~~~-~~~~~~~~~l~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi 513 (795)
T 4a2l_A 437 GQV-ENFNQRNSQLVNENVYAILPDGEGNLWLG-TL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWI 513 (795)
T ss_dssp CCE-EEECTTTSCCSCSCEEEEEECSSSCEEEE-ES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEE
T ss_pred CcE-EEeecCCCCcCCCeeEEEEECCCCCEEEE-ec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEE
Confidence 653 3332 12457899998888875554 44 568889987654322111 1224555666666444
Q ss_pred EEcCCCcEEEEECCCCCeeeEE--e-eCCCcceeeEEEEecCCCeeEEE
Q 039044 145 VGTADRNLVVFNLQNPQTEFKR--I-NSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 145 ~~~~dg~v~~~d~~~~~~~~~~--~-~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
|+.+ -+..||..+.+..+.. . .......|.++...++|...+.+
T Consensus 514 -gt~~-Gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT 560 (795)
T 4a2l_A 514 -GGEE-GLSVFKQEGLDIQKASILPVSNVTKLFTNCIYEASNGIIWVGT 560 (795)
T ss_dssp -EESS-CEEEEEEETTEEEECCCSCSCGGGGSCEEEEEECTTSCEEEEE
T ss_pred -EeCC-ceEEEeCCCCeEEEecCCCCCCCCCCeeEEEEECCCCCEEEEe
Confidence 4444 4888998765431100 0 01123468889888888876654
No 272
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.38 E-value=0.00014 Score=55.90 Aligned_cols=149 Identities=11% Similarity=0.086 Sum_probs=94.1
Q ss_pred CCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeE-EEEecCCCeEEEecC------CCeEEEEecCCCCceEE
Q 039044 12 ANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLC-STWKDDGTTVFSGGC------DKQVKMWPLLSGGQPVT 84 (194)
Q Consensus 12 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~~------d~~i~~~d~~~~~~~~~ 84 (194)
+..++.++.|+.|..+|..+++..-...... ......+.+ .... + ..++.+.. +|.|..+|.++|+.+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~P~v~-~-~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTD-PAKPYSITGAPRVV-K-GKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSC-TTSSCBCCSCCEEE-T-TEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCC-CCCcceecCCCEEE-C-CEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 4578888889999999998876411110000 000001110 0111 3 34555543 58999999999998877
Q ss_pred eccCC---C----------------------------cEEEEEecCCCCEEEEeeCCC-------------------eEE
Q 039044 85 VAMHD---A----------------------------PIKEVAWIPEMNLLATGSWDK-------------------TLK 114 (194)
Q Consensus 85 ~~~~~---~----------------------------~v~~~~~~~~~~~l~~~~~d~-------------------~v~ 114 (194)
+.... . ....+++.|+...++.++.++ .|.
T Consensus 194 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~ 273 (668)
T 1kv9_A 194 FYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSIL 273 (668)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 64210 0 012467888777887777665 499
Q ss_pred EEeCCCCCceeEEecC----------C--eEEEEecCCC---EEEEEcCCCcEEEEECCCCCee
Q 039044 115 YWDTRQPNPVHTQQLP----------D--RCYALTVRYP---LMVVGTADRNLVVFNLQNPQTE 163 (194)
Q Consensus 115 vwd~~~~~~~~~~~~~----------~--~~~~~~~~~~---~l~~~~~dg~v~~~d~~~~~~~ 163 (194)
-+|.++++.+-.++.. . ....+..+++ .++.++.+|.++++|.++++..
T Consensus 274 AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 274 AIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred EEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 9999999988766542 1 1223334665 6888999999999999998754
No 273
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.36 E-value=0.00023 Score=50.34 Aligned_cols=177 Identities=10% Similarity=-0.044 Sum_probs=105.8
Q ss_pred eeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEe-cCCCeEEEEecCCCCce
Q 039044 4 SSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSG-GCDKQVKMWPLLSGGQP 82 (194)
Q Consensus 4 ~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~ 82 (194)
+|.+..++ ..|+.+. ...|+..++..... ............++|++..+.|+.. ...+.|..+++..+...
T Consensus 37 ~C~~~~~~-~~ll~~~-~~~I~~i~~~g~~~------~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~ 108 (349)
T 3v64_C 37 SCKALGPE-PVLLFAN-RIDIRQVLPHRSEY------TLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE 108 (349)
T ss_dssp CEEESSSC-CEEEEEC-BSCEEEECTTSCCE------EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred cccccccC-ceeEeec-ccceEEEeCCCCee------EEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCce
Confidence 34444443 3344333 34577777654421 1222233457899999866665544 56788999998766544
Q ss_pred EEeccCCCcEEEEEecCC-CCEEEEeeCCCeEEEEeCCCCCceeEEe---cCCeEEEEecCCCEEEEEcC-C-CcEEEEE
Q 039044 83 VTVAMHDAPIKEVAWIPE-MNLLATGSWDKTLKYWDTRQPNPVHTQQ---LPDRCYALTVRYPLMVVGTA-D-RNLVVFN 156 (194)
Q Consensus 83 ~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~-d-g~v~~~d 156 (194)
..+.........+++.+. ++++++-...+.|.+.++.......... .....++++|.+..|+.... . +.|..++
T Consensus 109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 433333345678999874 4555565667899999987544332222 12467899986666555543 4 7788888
Q ss_pred CCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 157 LQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
+..... ..+....-...+.++++|++..|..+
T Consensus 189 ~dG~~~--~~~~~~~~~~PnGla~d~~~~~lY~a 220 (349)
T 3v64_C 189 MDGSGR--RIIADTHLFWPNGLTIDYAGRRMYWV 220 (349)
T ss_dssp TTSCSC--EESCCSSCSCEEEEEEETTTTEEEEE
T ss_pred CCCCCc--EEEEECCCCCcceEEEeCCCCEEEEE
Confidence 875432 12212223346899999877766554
No 274
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.36 E-value=0.00026 Score=50.77 Aligned_cols=168 Identities=10% Similarity=-0.062 Sum_probs=102.3
Q ss_pred EEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEE-EecCCCeEEEEecCCCCceEEeccCCCcE
Q 039044 14 ILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVF-SGGCDKQVKMWPLLSGGQPVTVAMHDAPI 92 (194)
Q Consensus 14 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~v 92 (194)
+|+.+. ...|+.+++..... ............++|++.+..|+ +-...+.|..+++..+.....+.......
T Consensus 89 ~l~~~~-~~~I~~i~~~~~~~------~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p 161 (386)
T 3v65_B 89 VLLFAN-RIDIRQVLPHRSEY------TLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESP 161 (386)
T ss_dssp EEEEEC-BSCEEEECTTSCCC------EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCC
T ss_pred eeEeec-CccceeeccCCCcE------EEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCc
Confidence 444433 34677777765432 22223344578999998666555 44567889999987655433333333456
Q ss_pred EEEEecCC-CCEEEEeeCCCeEEEEeCCCCCceeEEe---cCCeEEEEecCCCEEEEEcC-C-CcEEEEECCCCCeeeEE
Q 039044 93 KEVAWIPE-MNLLATGSWDKTLKYWDTRQPNPVHTQQ---LPDRCYALTVRYPLMVVGTA-D-RNLVVFNLQNPQTEFKR 166 (194)
Q Consensus 93 ~~~~~~~~-~~~l~~~~~d~~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~-d-g~v~~~d~~~~~~~~~~ 166 (194)
..+++.+. +.++++-...+.|.+.++.......... .....++++|.+..|+.... . +.|..+++...... .
T Consensus 162 ~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~--~ 239 (386)
T 3v65_B 162 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR--I 239 (386)
T ss_dssp CCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE--E
T ss_pred cEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE--E
Confidence 78888874 4555555567889999887544332222 12367899987776665543 3 67888888754322 2
Q ss_pred eeCCCcceeeEEEEecCCCeeEEE
Q 039044 167 INSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 167 ~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
+....-...+.|+++|++..|..+
T Consensus 240 ~~~~~~~~PnGlavd~~~~~lY~a 263 (386)
T 3v65_B 240 IADTHLFWPNGLTIDYAGRRMYWV 263 (386)
T ss_dssp EECSSCSCEEEEEEEGGGTEEEEE
T ss_pred EEECCCCCeeeEEEeCCCCEEEEE
Confidence 222223346889999877766554
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.35 E-value=0.00022 Score=49.71 Aligned_cols=168 Identities=11% Similarity=-0.050 Sum_probs=101.1
Q ss_pred EEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEE-EecCCCeEEEEecCC----CCceEEeccC
Q 039044 14 ILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVF-SGGCDKQVKMWPLLS----GGQPVTVAMH 88 (194)
Q Consensus 14 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~~~d~~~----~~~~~~~~~~ 88 (194)
+|+.+.. ..|+..++..... ............++|+++++.|+ +-..++.|..+++.. ......+...
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~------~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~ 75 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEY------TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 75 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCC------EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS
T ss_pred EEEEECC-CeEEEEECCCcce------EehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC
Confidence 3444443 4588888876542 11223345678999998766555 445568999999876 2222223323
Q ss_pred CCcEEEEEecCC-CCEEEEeeCCCeEEEEeCCCCCceeEEe---cCCeEEEEecCCCEEEEEcCC--CcEEEEECCCCCe
Q 039044 89 DAPIKEVAWIPE-MNLLATGSWDKTLKYWDTRQPNPVHTQQ---LPDRCYALTVRYPLMVVGTAD--RNLVVFNLQNPQT 162 (194)
Q Consensus 89 ~~~v~~~~~~~~-~~~l~~~~~d~~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~d--g~v~~~d~~~~~~ 162 (194)
......+++.+. ++++++-...+.|.+.|+.......... .....++++|.+..|+..... +.|..+++.....
T Consensus 76 ~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~ 155 (316)
T 1ijq_A 76 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 155 (316)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE
T ss_pred CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe
Confidence 345678999874 4555555667899999987543322222 234678899877666655543 6788888865432
Q ss_pred eeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 163 EFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 163 ~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
. .+....-...+.++++|++..|..+
T Consensus 156 ~--~~~~~~~~~P~gla~d~~~~~lY~~ 181 (316)
T 1ijq_A 156 Y--SLVTENIQWPNGITLDLLSGRLYWV 181 (316)
T ss_dssp E--EEECSSCSCEEEEEEETTTTEEEEE
T ss_pred E--EEEECCCCCceEEEEeccCCEEEEE
Confidence 2 2211122456899999987766554
No 276
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.33 E-value=0.00027 Score=50.00 Aligned_cols=154 Identities=6% Similarity=-0.062 Sum_probs=96.4
Q ss_pred eeeEEEcCCCCEEE-EeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeE-EEecCCCeEEEEecCCCC
Q 039044 3 VSSLCFSPKANILV-ATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV-FSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 3 v~~~~~~p~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~ 80 (194)
+..++|++.+..|+ +-...+.|..+++..... .............+++.+.+..| ++-...+.|.+.++....
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-----~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRANLNGSNV-----EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred eEEEEEeccccEEEEEeccCCceEEEecCCCCc-----eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc
Confidence 46788987655554 444567888888776532 11111222345789999855544 555567889999987554
Q ss_pred ceEEeccCCCcEEEEEecCCCCE-EEEeeCC-CeEEEEeCCCCCceeEEe---cCCeEEEEecCCCEEEEEc-CCCcEEE
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNL-LATGSWD-KTLKYWDTRQPNPVHTQQ---LPDRCYALTVRYPLMVVGT-ADRNLVV 154 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d-~~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~-~dg~v~~ 154 (194)
....+.........+++.|.+.. +++-... +.|..+++.......... .....+++++++..|+.+. ..+.|..
T Consensus 150 ~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~ 229 (349)
T 3v64_C 150 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 229 (349)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEE
Confidence 43334334456789999995554 4444444 788888887543222111 1236789998777666654 4677999
Q ss_pred EECCCCC
Q 039044 155 FNLQNPQ 161 (194)
Q Consensus 155 ~d~~~~~ 161 (194)
+|+....
T Consensus 230 ~~~dG~~ 236 (349)
T 3v64_C 230 ANLDGSH 236 (349)
T ss_dssp EETTSCS
T ss_pred EeCCCCc
Confidence 9987543
No 277
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.33 E-value=0.00026 Score=53.69 Aligned_cols=148 Identities=12% Similarity=0.021 Sum_probs=90.0
Q ss_pred EEEeeCCCeEEEEecccCCcccccccccccCCCCCeeE-EEEecCCCeEEEec------CCCeEEEEecCCCCceEEecc
Q 039044 15 LVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLC-STWKDDGTTVFSGG------CDKQVKMWPLLSGGQPVTVAM 87 (194)
Q Consensus 15 l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~~~~------~d~~i~~~d~~~~~~~~~~~~ 87 (194)
++.++.|+.+..+|..+++..-........ ....+.+ -... ++ .++.++ .++.|+.+|.++++.+.++..
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~-~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIK-VGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGG-GTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCC-ccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 888888999999998887541110000000 0001111 1111 34 455554 379999999999998876643
Q ss_pred CCCcE--------------------------------------EEEEecCCCCEEEEeeCC----------------CeE
Q 039044 88 HDAPI--------------------------------------KEVAWIPEMNLLATGSWD----------------KTL 113 (194)
Q Consensus 88 ~~~~v--------------------------------------~~~~~~~~~~~l~~~~~d----------------~~v 113 (194)
..... ..+++.++...++.+..+ +.|
T Consensus 201 ~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv 280 (599)
T 1w6s_A 201 TGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTI 280 (599)
T ss_dssp SSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred CCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceE
Confidence 21110 124455666666666544 489
Q ss_pred EEEeCCCCCceeEEecCC----------e-EE-EEe-cCC---CEEEEEcCCCcEEEEECCCCCeeeE
Q 039044 114 KYWDTRQPNPVHTQQLPD----------R-CY-ALT-VRY---PLMVVGTADRNLVVFNLQNPQTEFK 165 (194)
Q Consensus 114 ~vwd~~~~~~~~~~~~~~----------~-~~-~~~-~~~---~~l~~~~~dg~v~~~d~~~~~~~~~ 165 (194)
.-+|.++++.+-.++... . .+ ... .++ ..++.++.+|.++++|.++++....
T Consensus 281 ~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~ 348 (599)
T 1w6s_A 281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSA 348 (599)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeec
Confidence 999999999876665421 1 22 222 467 4677789999999999999886544
No 278
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.30 E-value=0.00036 Score=50.09 Aligned_cols=154 Identities=6% Similarity=-0.067 Sum_probs=96.0
Q ss_pred eeeEEEcCCCCEEE-EeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeE-EEecCCCeEEEEecCCCC
Q 039044 3 VSSLCFSPKANILV-ATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV-FSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 3 v~~~~~~p~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~ 80 (194)
+..++|++.+..|+ +-...+.|..+++..... .............+++.+.+..| ++-...+.|.+.++....
T Consensus 118 ~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-----~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~ 192 (386)
T 3v65_B 118 AIALDFHHRRELVFWSDVTLDRILRANLNGSNV-----EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH 192 (386)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCCE-----EEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS
T ss_pred cEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc-----EEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc
Confidence 46788987555444 445567888888776531 11111222345678898855544 455567789999887554
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEee-CC-CeEEEEeCCCCCceeEEec---CCeEEEEecCCCEEEEEc-CCCcEEE
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGS-WD-KTLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGT-ADRNLVV 154 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~-~dg~v~~ 154 (194)
....+.........+++.|.+..|..+. .. +.|..+++........... ....+++++++..|+.+. ..+.|..
T Consensus 193 ~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~ 272 (386)
T 3v65_B 193 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 272 (386)
T ss_dssp CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEE
Confidence 4333443446789999998655554443 34 6888888875433322221 246789998776666554 4677999
Q ss_pred EECCCCC
Q 039044 155 FNLQNPQ 161 (194)
Q Consensus 155 ~d~~~~~ 161 (194)
+|+....
T Consensus 273 ~d~dG~~ 279 (386)
T 3v65_B 273 ANLDGSH 279 (386)
T ss_dssp ECTTSCS
T ss_pred EeCCCCe
Confidence 9987543
No 279
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.30 E-value=0.00047 Score=53.97 Aligned_cols=181 Identities=7% Similarity=-0.042 Sum_probs=105.9
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.|.++...+++.+.+ |+.++-+..++..++.... ..........|.++...+++++.+.. . +.+..||..+++.
T Consensus 408 ~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~---~~~~~~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 408 SVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQI---IELEKNELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLASKKV 481 (781)
T ss_dssp BEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEE---CCSTTTCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSSSSC
T ss_pred ceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEE---eccCCCCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCCCeE
Confidence 467787777776544 6666668888876543100 00001234678888888887655544 4 5588899877654
Q ss_pred eEEeccC-----CCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec-------CCeEEEEecCCCEEEEEcCC
Q 039044 82 PVTVAMH-----DAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL-------PDRCYALTVRYPLMVVGTAD 149 (194)
Q Consensus 82 ~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~d 149 (194)
....... ...|.++...++|.+.+ ++..+-|..+|..+.+. ..+.. ...++...+++.. ..++.+
T Consensus 482 ~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~l-Wi~T~~ 558 (781)
T 3v9f_A 482 IHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQM-WLATGE 558 (781)
T ss_dssp CEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCE-EEEETT
T ss_pred EecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCE-EEEECC
Confidence 3322211 35789999888887554 45445577788765542 22221 1234555566664 444557
Q ss_pred CcEEEEECCCCCeeeEEeeCC-CcceeeEEEEecCCCeeEEEE
Q 039044 150 RNLVVFNLQNPQTEFKRINSP-LKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 150 g~v~~~d~~~~~~~~~~~~~~-~~~~v~~i~~~p~~~~l~~~~ 191 (194)
|.+..||..+.+........+ ....+.++...++|...+.+.
T Consensus 559 Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~ 601 (781)
T 3v9f_A 559 GLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTN 601 (781)
T ss_dssp EEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECS
T ss_pred CceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcC
Confidence 755888887654221111111 224577888888887776653
No 280
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.28 E-value=0.00034 Score=48.74 Aligned_cols=158 Identities=6% Similarity=-0.070 Sum_probs=93.9
Q ss_pred eeeEEEcCCCCEEE-EeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeE-EEecCCCeEEEEecCCCC
Q 039044 3 VSSLCFSPKANILV-ATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTV-FSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 3 v~~~~~~p~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~ 80 (194)
+..++|++.+..|+ +-..++.|..+++....... .........-.....+++.+.+..| ++-...+.|.++++....
T Consensus 32 p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~-~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~ 110 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 110 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC---------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS
T ss_pred eEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCc-ccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCc
Confidence 46889998655444 44556889888887521000 0011111222345789998755544 455667899999987543
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEeeC-C-CeEEEEeCCCCCceeEEe---cCCeEEEEecCCCEEEEEc-CCCcEEE
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGSW-D-KTLKYWDTRQPNPVHTQQ---LPDRCYALTVRYPLMVVGT-ADRNLVV 154 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~-~dg~v~~ 154 (194)
....+.........+++.|.+..|+.+.. . +.|...++.......... .....+++++++..|+.+. ..+.|..
T Consensus 111 ~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~ 190 (316)
T 1ijq_A 111 RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 190 (316)
T ss_dssp EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEE
Confidence 33333333456789999986555544443 3 688888876433221111 1235789998877766655 4678999
Q ss_pred EECCCCC
Q 039044 155 FNLQNPQ 161 (194)
Q Consensus 155 ~d~~~~~ 161 (194)
+|+....
T Consensus 191 ~d~dg~~ 197 (316)
T 1ijq_A 191 IDVNGGN 197 (316)
T ss_dssp EETTSCS
T ss_pred EecCCCc
Confidence 9997543
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.24 E-value=0.00023 Score=51.89 Aligned_cols=141 Identities=4% Similarity=-0.032 Sum_probs=83.5
Q ss_pred CeeEEEEecC--CCeEEEecCCCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCC---C-eEEEEeCCCCC
Q 039044 49 PVLCSTWKDD--GTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWD---K-TLKYWDTRQPN 122 (194)
Q Consensus 49 ~i~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~-~v~vwd~~~~~ 122 (194)
....++|+|+ ...|+.+...+.|+.+|..++... .+.........++++++|+++++.... . .+...+.....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~-~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD-IKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE-EECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE-EeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 4568999984 445665555488999998765543 343345568999999999944443311 1 23334332221
Q ss_pred c---eeEEecCCeEEEEec-CCCEEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 123 P---VHTQQLPDRCYALTV-RYPLMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 123 ~---~~~~~~~~~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
. ..........++++| ++...++-..++.|+.+|..++.................++|+|+++.|.++
T Consensus 219 ~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 219 TERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp CCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEE
T ss_pred eccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEE
Confidence 1 111112335678898 6666656666788999998865531111222112223469999999866554
No 282
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.24 E-value=0.00052 Score=49.48 Aligned_cols=159 Identities=6% Similarity=-0.122 Sum_probs=97.8
Q ss_pred CeeeEEEcCCCCEEEEe-eCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCC-CeEEEecCCCeEEEEecCCC
Q 039044 2 SVSSLCFSPKANILVAT-SWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDG-TTVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~ 79 (194)
.+..++|++.+..|+.. ...+.|+.+++...... ................+++.+.+ ++.++-...+.|.+.+++..
T Consensus 113 ~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~-~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~ 191 (400)
T 3p5b_L 113 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV-SSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 191 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC-------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTC
T ss_pred cceEEeeeeccCceEEEecCCCeEEEEEcccCCCC-CcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCC
Confidence 35688999865555544 45678888887652100 00111222234467789999844 44455566789999998765
Q ss_pred CceEEeccCCCcEEEEEecCCCCEEEEee-C-CCeEEEEeCCCCCceeEEe---cCCeEEEEecCCCEEEEEc-CCCcEE
Q 039044 80 GQPVTVAMHDAPIKEVAWIPEMNLLATGS-W-DKTLKYWDTRQPNPVHTQQ---LPDRCYALTVRYPLMVVGT-ADRNLV 153 (194)
Q Consensus 80 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-d~~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~-~dg~v~ 153 (194)
.....+.........+++.|.+.+|+... . .+.|...++.......... .....+++++++..|+.+. ..+.|.
T Consensus 192 ~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~ 271 (400)
T 3p5b_L 192 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 271 (400)
T ss_dssp SEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred ceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEE
Confidence 54444443445688999999655554443 2 4788888887544332222 2346899998877777665 467799
Q ss_pred EEECCCCC
Q 039044 154 VFNLQNPQ 161 (194)
Q Consensus 154 ~~d~~~~~ 161 (194)
.+|+....
T Consensus 272 ~~d~dG~~ 279 (400)
T 3p5b_L 272 SIDVNGGN 279 (400)
T ss_dssp EEETTSCC
T ss_pred EEeCCCCc
Confidence 99987544
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.24 E-value=0.00054 Score=49.40 Aligned_cols=168 Identities=11% Similarity=-0.055 Sum_probs=105.2
Q ss_pred EEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEe-cCCCeEEEEecCCC----CceEEeccC
Q 039044 14 ILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSG-GCDKQVKMWPLLSG----GQPVTVAMH 88 (194)
Q Consensus 14 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~----~~~~~~~~~ 88 (194)
+|+.+. ...|+..++..... .........+..++|++.+..|+-. ...+.|+.+++... .....+...
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~------~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~ 157 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEY------TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 157 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSC------EEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS
T ss_pred eeEEec-cceeEEEccCCcce------eEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC
Confidence 444444 46788888876532 2223345668899999966666554 45688999988652 222333334
Q ss_pred CCcEEEEEecC-CCCEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecCCCEEEEEcC--CCcEEEEECCCCCe
Q 039044 89 DAPIKEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTA--DRNLVVFNLQNPQT 162 (194)
Q Consensus 89 ~~~v~~~~~~~-~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~--dg~v~~~d~~~~~~ 162 (194)
......+++.+ .++++++-...+.|.+.++........... ....++++|.+..|+.... .+.|...++.....
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~ 237 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 237 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc
Confidence 45678899987 555566656678999999876543333322 2467899997766666553 46799999876443
Q ss_pred eeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 163 EFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 163 ~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
. .+....-...+.|+++|++..|..+
T Consensus 238 ~--~~~~~~l~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 238 Y--SLVTENIQWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp E--EEECSSCSCEEEEEEETTTTEEEEE
T ss_pred E--EEEECCCCceEEEEEEeCCCEEEEE
Confidence 2 2212222456889999887766654
No 284
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.19 E-value=0.00058 Score=51.62 Aligned_cols=76 Identities=11% Similarity=0.007 Sum_probs=51.0
Q ss_pred EEEEecCCCeEEEecCC----------------CeEEEEecCCCCceEEeccC--C--------CcEEEEEecCCCC---
Q 039044 52 CSTWKDDGTTVFSGGCD----------------KQVKMWPLLSGGQPVTVAMH--D--------APIKEVAWIPEMN--- 102 (194)
Q Consensus 52 ~~~~~~~~~~l~~~~~d----------------~~i~~~d~~~~~~~~~~~~~--~--------~~v~~~~~~~~~~--- 102 (194)
.+++.++...++.+..+ +.|..+|.++++.+..++.. . .++ -+...++|+
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~ 317 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTP 317 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEE
Confidence 45677776677666532 36999999999988776522 1 111 122224674
Q ss_pred EEEEeeCCCeEEEEeCCCCCceeEEe
Q 039044 103 LLATGSWDKTLKYWDTRQPNPVHTQQ 128 (194)
Q Consensus 103 ~l~~~~~d~~v~vwd~~~~~~~~~~~ 128 (194)
.++.++.+|.+.++|.++++.+....
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeec
Confidence 56778889999999999998775543
No 285
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.18 E-value=0.00065 Score=50.20 Aligned_cols=142 Identities=8% Similarity=-0.010 Sum_probs=86.2
Q ss_pred CeeEEEEec-CCCeEEEe-cCCCeEEEEecCCCCceEEecc---CCCcEEEEEe-------cCCCCEEEEeeCCC-----
Q 039044 49 PVLCSTWKD-DGTTVFSG-GCDKQVKMWPLLSGGQPVTVAM---HDAPIKEVAW-------IPEMNLLATGSWDK----- 111 (194)
Q Consensus 49 ~i~~~~~~~-~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~---~~~~v~~~~~-------~~~~~~l~~~~~d~----- 111 (194)
....|+|+| +...|+.+ ...+.|++.|++++........ .......++| ++++++|+.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 356899998 34445544 4446788899877655433332 1235899999 99999766665543
Q ss_pred --eEEEEeCCC-CCce-----eEE--ecCCeEEEEecCC-CEEEEEcCCCcEEEEECC-------CCCe-----e-----
Q 039044 112 --TLKYWDTRQ-PNPV-----HTQ--QLPDRCYALTVRY-PLMVVGTADRNLVVFNLQ-------NPQT-----E----- 163 (194)
Q Consensus 112 --~v~vwd~~~-~~~~-----~~~--~~~~~~~~~~~~~-~~l~~~~~dg~v~~~d~~-------~~~~-----~----- 163 (194)
.|.+++... ++.. ..+ ..+...++++|++ ..+++-..++.|+.+|+. ++.. +
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 366776443 1221 111 1234577889954 555566678889999987 4432 0
Q ss_pred eEE-eeCCCcceeeEEEEecCCCeeEEE
Q 039044 164 FKR-INSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 164 ~~~-~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
... ...+.......++|+|+|+.|.++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYva 327 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFG 327 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEE
Confidence 111 222233446799999999965544
No 286
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.16 E-value=0.0014 Score=51.29 Aligned_cols=179 Identities=13% Similarity=0.073 Sum_probs=106.5
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.|.++...+++. |..|+.++-|..|+..+..... ...........|.++...+++++.+ |+.++.+..++.++++.
T Consensus 364 ~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~--~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 364 VVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIY--NKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKF 439 (781)
T ss_dssp CEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEEC--C-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEE
T ss_pred ceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEE--ccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcE
Confidence 477788777766 4455655568888865432100 0000112346788898887776555 56666788898766543
Q ss_pred eEEec---cCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEe--------cCCeEEEEecCCCEEEEEcCCC
Q 039044 82 PVTVA---MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ--------LPDRCYALTVRYPLMVVGTADR 150 (194)
Q Consensus 82 ~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~~~~dg 150 (194)
..+. .....|.++...+++.+.+ ++. +.|..+|..+++...... ....++...+++. |..|+.++
T Consensus 440 -~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~~~ 515 (781)
T 3v9f_A 440 -QIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGR-FWIGTFGG 515 (781)
T ss_dssp -EECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCC-EEEEESSS
T ss_pred -EEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCC-EEEEEcCC
Confidence 2232 1346789998888776544 454 678999987765433221 1234555666665 44455534
Q ss_pred cEEEEECCCCCeeeEEeeC---CCcceeeEEEEecCCCeeEEE
Q 039044 151 NLVVFNLQNPQTEFKRINS---PLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 151 ~v~~~d~~~~~~~~~~~~~---~~~~~v~~i~~~p~~~~l~~~ 190 (194)
-+..||..+.+ +..... .....|.++...++|...+.+
T Consensus 516 Gl~~~~~~~~~--~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T 556 (781)
T 3v9f_A 516 GVGIYTPDMQL--VRKFNQYEGFCSNTINQIYRSSKGQMWLAT 556 (781)
T ss_dssp CEEEECTTCCE--EEEECTTTTCSCSCEEEEEECTTSCEEEEE
T ss_pred CEEEEeCCCCe--EEEccCCCCCCCCeeEEEEECCCCCEEEEE
Confidence 48888887653 222221 123568888888888876654
No 287
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.14 E-value=0.00073 Score=47.30 Aligned_cols=179 Identities=9% Similarity=0.013 Sum_probs=95.7
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCce
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQP 82 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 82 (194)
+..+.+.++++.++.+ .++.| |...+.... -..........+..+.+.|++.+++.+...+..+-.|- .+..-
T Consensus 124 ~~~i~~~~~~~~~~~~-~~g~v--~~S~DgG~t---W~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~-gG~tW 196 (327)
T 2xbg_A 124 PRLIKALGNGSAEMIT-NVGAI--YRTKDSGKN---WQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP-GQTAW 196 (327)
T ss_dssp EEEEEEEETTEEEEEE-TTCCE--EEESSTTSS---EEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECT-TCSSC
T ss_pred eEEEEEECCCCEEEEe-CCccE--EEEcCCCCC---CEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCC-CCCce
Confidence 4566666666666555 35543 333332210 01112234457889999998887777654443443442 12222
Q ss_pred EEe-ccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec-------CCeEEEEecCCCEEEEEcCCCcEEE
Q 039044 83 VTV-AMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL-------PDRCYALTVRYPLMVVGTADRNLVV 154 (194)
Q Consensus 83 ~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~dg~v~~ 154 (194)
..+ ......+..+.+.+++..++ ++.+|.+.+.+...++.-..... ....+.+.+++..++++. +|.+ +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~ 273 (327)
T 2xbg_A 197 EPHNRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-L 273 (327)
T ss_dssp EEEECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-E
T ss_pred eECCCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-E
Confidence 222 23456788999999887654 45578877764221221111111 124556666666666554 6666 3
Q ss_pred EECCCCCeeeEEeeC--CCcceeeEEEEecCCCeeEEEEe
Q 039044 155 FNLQNPQTEFKRINS--PLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 155 ~d~~~~~~~~~~~~~--~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
+....++ ....... .....+.++.|.+++..+++|..
T Consensus 274 ~S~DgG~-tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~ 312 (327)
T 2xbg_A 274 CSQDGGQ-TWQQDVDVKKVPSNFYKILFFSPDQGFILGQK 312 (327)
T ss_dssp EESSTTS-SCEECGGGTTSSSCCCEEEEEETTEEEEECST
T ss_pred EeCCCCc-ccEEcCccCCCCCCeEEEEEECCCceEEEcCC
Confidence 4444343 2333321 12356788988877777776643
No 288
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.08 E-value=0.00016 Score=55.99 Aligned_cols=157 Identities=6% Similarity=-0.113 Sum_probs=89.5
Q ss_pred eeeEEEcCCCCEEEEee-CCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCC-CeEEEecCCCeEEEEecCCCC
Q 039044 3 VSSLCFSPKANILVATS-WDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDG-TTVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~ 80 (194)
+..++|++.+..|+.+. ..+.|+.+++....... ...............|++.+.+ +++++-...+.|.++++....
T Consensus 408 p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~-~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 408 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp CCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-C-CCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred eEEEccccccCeEEEEecCCCeEEEEecCCCCCCc-ceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 45788888666665553 45778888876511000 0011111112234567887644 444454567889999987544
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEee-CC-CeEEEEeCCCCCceeEE--e-cCCeEEEEecCCCEEEE-EcCCCcEEE
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGS-WD-KTLKYWDTRQPNPVHTQ--Q-LPDRCYALTVRYPLMVV-GTADRNLVV 154 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~v~vwd~~~~~~~~~~--~-~~~~~~~~~~~~~~l~~-~~~dg~v~~ 154 (194)
....+.........+++.|.+.+|+.+. .. +.|.++++......... . .....+++++++..|+. -+..+.|..
T Consensus 487 ~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~ 566 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 566 (699)
T ss_dssp EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEE
Confidence 3333332334567899999655544443 22 67888877543222111 1 12457999987655544 445678999
Q ss_pred EECCCC
Q 039044 155 FNLQNP 160 (194)
Q Consensus 155 ~d~~~~ 160 (194)
+++...
T Consensus 567 ~d~dG~ 572 (699)
T 1n7d_A 567 IDVNGG 572 (699)
T ss_dssp ECSSSS
T ss_pred EccCCC
Confidence 998753
No 289
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.03 E-value=0.0013 Score=45.91 Aligned_cols=155 Identities=8% Similarity=-0.055 Sum_probs=95.2
Q ss_pred eeeEEEcCCC-CEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCC-eEEEecCCCeEEEEecCCCC
Q 039044 3 VSSLCFSPKA-NILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGT-TVFSGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 3 v~~~~~~p~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~ 80 (194)
+..++|++.+ .++.+-...+.|..+++..... ........-.....+++.+.+. +..+-...+.|.++++....
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~----~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES----VQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSC----CCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCc----eEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc
Confidence 3567888754 4444545567788888765421 0111112223466889997554 44555567899999987544
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEee--CCCeEEEEeCCCCCceeEEec---CCeEEEEecCCCEEEEEc-CCCcEEE
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGS--WDKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGT-ADRNLVV 154 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~-~dg~v~~ 154 (194)
..............+++.|.+..|..+. ..+.|...++........... ....+++++++..|+.+. ..+.|..
T Consensus 113 ~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~ 192 (318)
T 3sov_A 113 RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 192 (318)
T ss_dssp CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEE
Confidence 3333334456678999998655555444 357888888864332222221 236889999777666654 4677999
Q ss_pred EECCCCC
Q 039044 155 FNLQNPQ 161 (194)
Q Consensus 155 ~d~~~~~ 161 (194)
+|+....
T Consensus 193 ~d~dG~~ 199 (318)
T 3sov_A 193 SNLDGTN 199 (318)
T ss_dssp EETTSCS
T ss_pred EcCCCCc
Confidence 9987543
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.97 E-value=0.0037 Score=49.10 Aligned_cols=158 Identities=6% Similarity=-0.104 Sum_probs=95.6
Q ss_pred eeeEEEcCCCC-EEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEE-EecCCCeEEEEecCCCC
Q 039044 3 VSSLCFSPKAN-ILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVF-SGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 3 v~~~~~~p~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~ 80 (194)
+..|+|++... ++++-...+.|+.+++....... ...............|++.+.++.|+ +-...+.|.+.++....
T Consensus 426 ~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~-~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~ 504 (791)
T 3m0c_C 426 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 504 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC---------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSS
T ss_pred eEEEeecccCCeeEEeeccceeEEEEeccCCCCCc-ceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCe
Confidence 46788888544 44454556778888876531100 01112222334567899998775555 54567899999987544
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEee-C-CCeEEEEeCCCCCceeEEec---CCeEEEEecCCCEEEEEc-CCCcEEE
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGS-W-DKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGT-ADRNLVV 154 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~-~dg~v~~ 154 (194)
....+.........|++.|.+.+|+... . .+.|...++........... ....+++++.+..|+.+. ..+.|..
T Consensus 505 ~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~ 584 (791)
T 3m0c_C 505 RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 584 (791)
T ss_dssp EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEE
Confidence 3333333445689999999755554443 2 36888888875443333322 346789998777776664 4567999
Q ss_pred EECCCCC
Q 039044 155 FNLQNPQ 161 (194)
Q Consensus 155 ~d~~~~~ 161 (194)
+++....
T Consensus 585 ~d~dG~~ 591 (791)
T 3m0c_C 585 IDVNGGN 591 (791)
T ss_dssp EETTSCS
T ss_pred EecCCCc
Confidence 9987654
No 291
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.93 E-value=0.001 Score=50.44 Aligned_cols=78 Identities=17% Similarity=0.064 Sum_probs=53.0
Q ss_pred CCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecCC----eEEEEecCCC-E
Q 039044 68 DKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPD----RCYALTVRYP-L 142 (194)
Q Consensus 68 d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~----~~~~~~~~~~-~ 142 (194)
+|.|..||+.+++.+.+..... ++..-.....+.+++.++.|+.++.||.++++.+.+++.+. ..+.+..+|+ +
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence 5789999999998877665322 22111111245677789999999999999999998887653 2355556775 4
Q ss_pred EEEE
Q 039044 143 MVVG 146 (194)
Q Consensus 143 l~~~ 146 (194)
+++.
T Consensus 544 v~~~ 547 (582)
T 1flg_A 544 LGVT 547 (582)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 4443
No 292
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.87 E-value=0.0028 Score=46.91 Aligned_cols=153 Identities=8% Similarity=-0.008 Sum_probs=89.6
Q ss_pred eeeEEEcC-CCCEEEEeeC-CCeEEEEecccCCcccccccccccCCCCCeeEEEE-------ecCCCeEEEecCCC----
Q 039044 3 VSSLCFSP-KANILVATSW-DNQVRCWEISRGGTGVASVPKASISHDHPVLCSTW-------KDDGTTVFSGGCDK---- 69 (194)
Q Consensus 3 v~~~~~~p-~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~l~~~~~d~---- 69 (194)
...|+|+| +...|+.+.. .+.|++.|+..+.... ....-.........++| +++++.|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~--l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSS--PLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEE--EECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEE--EEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 35789999 3544554443 4567778877653210 00010112335889999 99999666665543
Q ss_pred ---eEEEEecCC-CCce-----EEeccCCCcEEEEEecC-CCCEEEEeeCCCeEEEEeCC-------CCCc---------
Q 039044 70 ---QVKMWPLLS-GGQP-----VTVAMHDAPIKEVAWIP-EMNLLATGSWDKTLKYWDTR-------QPNP--------- 123 (194)
Q Consensus 70 ---~i~~~d~~~-~~~~-----~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~vwd~~-------~~~~--------- 123 (194)
.|.+++... +... ..+.. -.....++.+| ++.++++-..++.|..+|+. +++.
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred cCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 266665333 1221 22221 12345778899 45556666677889999987 4443
Q ss_pred --eeE-Eec----CCeEEEEecCCCEEEEE-cCCCcEEEEECC
Q 039044 124 --VHT-QQL----PDRCYALTVRYPLMVVG-TADRNLVVFNLQ 158 (194)
Q Consensus 124 --~~~-~~~----~~~~~~~~~~~~~l~~~-~~dg~v~~~d~~ 158 (194)
... ... ....++++|+++.|+.+ +....|+.++..
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 112 222 23579999999965554 456778886654
No 293
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.86 E-value=0.002 Score=46.49 Aligned_cols=114 Identities=11% Similarity=0.140 Sum_probs=76.8
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCccccc-------c--ccccc----CCCCCeeEEEEec---CCCeEEEe
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVAS-------V--PKASI----SHDHPVLCSTWKD---DGTTVFSG 65 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~-------~--~~~~~----~~~~~i~~~~~~~---~~~~l~~~ 65 (194)
.|..+..+|+|++||..+ +..|.+-.+..+...... . ..... ....+|..+.|+| .+..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 567799999999999987 457999998843211100 0 00111 1357899999999 45689999
Q ss_pred cCCCeEEEEecCCCCc-eEEe---------ccCCCcEEEEEecCCCCEEEE--eeCCCeEEEE
Q 039044 66 GCDKQVKMWPLLSGGQ-PVTV---------AMHDAPIKEVAWIPEMNLLAT--GSWDKTLKYW 116 (194)
Q Consensus 66 ~~d~~i~~~d~~~~~~-~~~~---------~~~~~~v~~~~~~~~~~~l~~--~~~d~~v~vw 116 (194)
..|+.|++||+..... ...+ ......|.+++|.+++-.|.. ....|.|+-.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 9999999999986221 1122 123367889999997765555 4477887654
No 294
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.83 E-value=0.0067 Score=47.68 Aligned_cols=162 Identities=10% Similarity=-0.060 Sum_probs=98.5
Q ss_pred CCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEE-EecCCCeEEEEecCCC----CceEEeccCCCcEEEE
Q 039044 21 DNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVF-SGGCDKQVKMWPLLSG----GQPVTVAMHDAPIKEV 95 (194)
Q Consensus 21 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~----~~~~~~~~~~~~v~~~ 95 (194)
...|+..++..... ..+......+..++|++....|+ +-...+.|+.+++... .....+.........|
T Consensus 403 ~~~Ir~i~l~~~~~------~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GL 476 (791)
T 3m0c_C 403 RHEVRKMTLDRSEY------TSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 476 (791)
T ss_dssp BSSEEEECTTSCCC------EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEE
T ss_pred ccceeEeeccCCcc------eeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCccee
Confidence 34577777765431 22233455678999998655554 5555678998988753 2223333344567789
Q ss_pred EecCCC-CEEEEeeCCCeEEEEeCCCCCceeEEec---CCeEEEEecCCCEEEEEcC--CCcEEEEECCCCCeeeEEeeC
Q 039044 96 AWIPEM-NLLATGSWDKTLKYWDTRQPNPVHTQQL---PDRCYALTVRYPLMVVGTA--DRNLVVFNLQNPQTEFKRINS 169 (194)
Q Consensus 96 ~~~~~~-~~l~~~~~d~~v~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~--dg~v~~~d~~~~~~~~~~~~~ 169 (194)
++.+.+ +++++-...+.|.+.++........... ....++++|...+|+.... .+.|...++..... ..+..
T Consensus 477 AvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~--~~lv~ 554 (791)
T 3m0c_C 477 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--YSLVT 554 (791)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE--EEEEC
T ss_pred eeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce--EEEEe
Confidence 998766 4555555678999999875543322221 3468899998666666553 26788889876443 22222
Q ss_pred CCcceeeEEEEecCCCeeEEE
Q 039044 170 PLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 170 ~~~~~v~~i~~~p~~~~l~~~ 190 (194)
..-...+.|+++|.+..|..+
T Consensus 555 ~~l~~P~GLavD~~~~~LYwa 575 (791)
T 3m0c_C 555 ENIQWPNGITLDLLSGRLYWV 575 (791)
T ss_dssp SSCSCEEEEEEETTTTEEEEE
T ss_pred CCCCCceEEEEecCCCeEEEE
Confidence 222456889999877666554
No 295
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.83 E-value=0.0022 Score=42.06 Aligned_cols=173 Identities=8% Similarity=-0.126 Sum_probs=94.3
Q ss_pred CCCCEEEEeeCCCeEEEEecccCCcccccccccccCC--CCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCceEEecc
Q 039044 10 PKANILVATSWDNQVRCWEISRGGTGVASVPKASISH--DHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAM 87 (194)
Q Consensus 10 p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 87 (194)
|...+|++..+| +++.=.................+. =..+..++|+|++.+.+. .+|.+.-.+..+..... +..
T Consensus 2 ~~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~-W~~ 77 (236)
T 1tl2_A 2 GGESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDN-WMG 77 (236)
T ss_dssp CCCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC-HHH
T ss_pred CcceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccc-ccc
Confidence 445678888887 655444443321111111112222 236789999998885555 77876666654422211 111
Q ss_pred CCCc--------EEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc---e---eEEe----cCCeEEEEecCCCEEEEEcCC
Q 039044 88 HDAP--------IKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP---V---HTQQ----LPDRCYALTVRYPLMVVGTAD 149 (194)
Q Consensus 88 ~~~~--------v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~---~---~~~~----~~~~~~~~~~~~~~l~~~~~d 149 (194)
.... -.++.|.|+|.+.++ .||.|.-++..+... + ..+. .....+.+.|+|...++. |
T Consensus 78 s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--d 153 (236)
T 1tl2_A 78 RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--G 153 (236)
T ss_dssp HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--T
T ss_pred cccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--C
Confidence 1122 478999999988877 469998887533221 1 1111 133688999999877666 7
Q ss_pred CcEEEEECCCCCe-----eeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 150 RNLVVFNLQNPQT-----EFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 150 g~v~~~d~~~~~~-----~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
+.++-....+... ....+....-..-+-+.|.|++..+++.
T Consensus 154 g~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 154 QQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp TEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE
T ss_pred CcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe
Confidence 7644322221110 0111221222334557788988877664
No 296
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.82 E-value=0.0024 Score=45.30 Aligned_cols=140 Identities=11% Similarity=-0.024 Sum_probs=76.8
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecC---CCeEEEecC----C----CeE
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDD---GTTVFSGGC----D----KQV 71 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~----d----~~i 71 (194)
...++|.|+++++++ ..+|.|++++. .+........ ...........|+++|+ +..|+.+.. + +.|
T Consensus 31 P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~-v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 31 PWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFD-VANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp EEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECC-CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccc-eeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 468999999985554 56699988863 2211000001 11122356889999997 555554433 2 567
Q ss_pred EEEecCCCC-----c--eE-Eecc-CCCcEEEEEecCCCCEEEEeeC-------------CCeEEEEeCCCC--------
Q 039044 72 KMWPLLSGG-----Q--PV-TVAM-HDAPIKEVAWIPEMNLLATGSW-------------DKTLKYWDTRQP-------- 121 (194)
Q Consensus 72 ~~~d~~~~~-----~--~~-~~~~-~~~~v~~~~~~~~~~~l~~~~~-------------d~~v~vwd~~~~-------- 121 (194)
..|+..... . +. .+.. .......++|.|+|.++++.+. .+.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~ 187 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP 187 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence 777765431 1 11 1221 1123467999999987776543 246666665432
Q ss_pred -CceeEEec-CCeEEEEec-CCCEEEE
Q 039044 122 -NPVHTQQL-PDRCYALTV-RYPLMVV 145 (194)
Q Consensus 122 -~~~~~~~~-~~~~~~~~~-~~~~l~~ 145 (194)
..+..... ....++++| +++..++
T Consensus 188 ~~~i~a~G~rnp~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 188 NSPIWSYGHRNPQGIDWHRASGVMVAT 214 (354)
T ss_dssp TCCEEEECCSCCCEEEECTTTCCEEEE
T ss_pred CCcEEEEccCCcceEEEeCCCCCEEEE
Confidence 01211111 235788888 5554443
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.79 E-value=0.00049 Score=53.29 Aligned_cols=152 Identities=9% Similarity=-0.140 Sum_probs=85.3
Q ss_pred eeEEEcCCC-CEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecC--CCeEEEEecCCCC
Q 039044 4 SSLCFSPKA-NILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGC--DKQVKMWPLLSGG 80 (194)
Q Consensus 4 ~~~~~~p~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~ 80 (194)
..|++.+.+ +++++-...+.|.++++..... .............++++|.+.+|+.+.. .+.|..+++....
T Consensus 456 ~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~-----~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~ 530 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-----KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 530 (699)
T ss_dssp CCEECCCSSSBCEECCTTTSCEEEEBSSSCCE-----EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC
T ss_pred ceEEEEeeCCcEEEEeccCCeEEEEecCCCce-----EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC
Confidence 456777544 4444444567788888765431 1111112234567889986655554432 2678888775433
Q ss_pred ceEEeccCCCcEEEEEecCCCCE-EEEeeCCCeEEEEeCCCCCceeEEec-----CCeEEEEecCCCEEEEEcCCCcEEE
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNL-LATGSWDKTLKYWDTRQPNPVHTQQL-----PDRCYALTVRYPLMVVGTADRNLVV 154 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~vwd~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~dg~v~~ 154 (194)
........-...+.|+|+|++.. +++-+..+.|..+|+........... ....+++..+ ..+++....+.|..
T Consensus 531 ~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~ 609 (699)
T 1n7d_A 531 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFS 609 (699)
T ss_dssp CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEE
T ss_pred eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEE
Confidence 32222222345678999986554 44545667899999875332222211 1224444433 33444455678999
Q ss_pred EECCCCC
Q 039044 155 FNLQNPQ 161 (194)
Q Consensus 155 ~d~~~~~ 161 (194)
+|..+++
T Consensus 610 ~d~~~G~ 616 (699)
T 1n7d_A 610 ANRLTGS 616 (699)
T ss_dssp EETTTEE
T ss_pred EEccCCC
Confidence 9987654
No 298
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.78 E-value=0.0043 Score=43.93 Aligned_cols=114 Identities=14% Similarity=0.103 Sum_probs=66.6
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecC---CCeEEEecC-C-----CeEEE
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDD---GTTVFSGGC-D-----KQVKM 73 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~-d-----~~i~~ 73 (194)
-..++|.|+++++++ ..+|.|++++ .+....................++++|+ +..|+.+.. . +.|..
T Consensus 33 P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 33 PWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp EEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 468999999985555 5679998888 3221000000111223456889999998 555555433 2 56888
Q ss_pred EecCCCCc-----eE-Eec---cCCCcEEEEEecCCCCEEEEeeC-------------CCeEEEEeCC
Q 039044 74 WPLLSGGQ-----PV-TVA---MHDAPIKEVAWIPEMNLLATGSW-------------DKTLKYWDTR 119 (194)
Q Consensus 74 ~d~~~~~~-----~~-~~~---~~~~~v~~~~~~~~~~~l~~~~~-------------d~~v~vwd~~ 119 (194)
++...+.. +. .+. ........++|.|+|.+.++.+. .+.|.-++..
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~d 177 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPE 177 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTT
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCC
Confidence 88764321 11 122 11123468999999987766542 2566666665
No 299
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.69 E-value=0.007 Score=43.78 Aligned_cols=132 Identities=12% Similarity=0.070 Sum_probs=85.7
Q ss_pred ecCCCeEEEecCCCeEEEEecCCCCceEEeccC----CCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC---------
Q 039044 56 KDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMH----DAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN--------- 122 (194)
Q Consensus 56 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~--------- 122 (194)
..++..++.+ .++.||.-++..+..-+.+... -..+..+..+|+|++|+..+ +..|.|..+..+.
T Consensus 29 ~~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 4466666665 3578888887754443344322 23678899999999999886 6788988876322
Q ss_pred ---ceeEEe---------cCCeEEEEecC---CCEEEEEcCCCcEEEEECCCCCeeeEEeeC--------CCcceeeEEE
Q 039044 123 ---PVHTQQ---------LPDRCYALTVR---YPLMVVGTADRNLVVFNLQNPQTEFKRINS--------PLKYQTRCVA 179 (194)
Q Consensus 123 ---~~~~~~---------~~~~~~~~~~~---~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~--------~~~~~v~~i~ 179 (194)
..+.+. .+...+.|+|- +..|++-..|+.|++||+.........+.. .....+.+++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEE
Confidence 111222 23467788884 468999999999999999863322122211 1125678899
Q ss_pred EecCCCeeEE
Q 039044 180 AFPDQQGFLV 189 (194)
Q Consensus 180 ~~p~~~~l~~ 189 (194)
|.+++-.|.+
T Consensus 187 Fg~~~lTLYv 196 (452)
T 3pbp_A 187 FSKDGLTLYC 196 (452)
T ss_dssp ECTTSSCEEE
T ss_pred EcCCCcEEEE
Confidence 9987755555
No 300
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.68 E-value=0.004 Score=40.89 Aligned_cols=108 Identities=9% Similarity=-0.019 Sum_probs=62.9
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCC--CCCeeEEEEecCCCeEEEecCCCeEEEEecCCC
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISH--DHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 79 (194)
.+.+++|+|++.+.++ .+|.+.-.+..+.......-.....+. -....++.|.|+|.+.++ .||.|.-++-.+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 4678999999987766 577655544433211000000111100 011478999999987777 5698887775332
Q ss_pred Cce------EEe-ccCCCcEEEEEecCCCCEEEEeeCCCeEEE
Q 039044 80 GQP------VTV-AMHDAPIKEVAWIPEMNLLATGSWDKTLKY 115 (194)
Q Consensus 80 ~~~------~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v 115 (194)
..- ..+ ..--..+..+.+.|+|.+.+.. |+.++-
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr 158 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYK 158 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEe
Confidence 211 111 1122567999999999887766 777543
No 301
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.68 E-value=0.0061 Score=42.94 Aligned_cols=138 Identities=10% Similarity=0.135 Sum_probs=85.7
Q ss_pred CCeEEEEecccCCccccccccc---ccCCCCCeeEEEE--ecC-CC-eEEEecCCCeEEEEecCC-------CCceEEec
Q 039044 21 DNQVRCWEISRGGTGVASVPKA---SISHDHPVLCSTW--KDD-GT-TVFSGGCDKQVKMWPLLS-------GGQPVTVA 86 (194)
Q Consensus 21 d~~i~i~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~--~~~-~~-~l~~~~~d~~i~~~d~~~-------~~~~~~~~ 86 (194)
+++|.+|+++............ .......+..+++ +|. ++ +++....+|.+..|++.. .+.++++.
T Consensus 98 ~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec
Confidence 4789999885332111111010 0011145666777 664 43 577888899999998832 23455555
Q ss_pred cCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCC-----CCceeEEe-----cCCeEEEE--ecCCC-EEEEEc-CCCcE
Q 039044 87 MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQ-----PNPVHTQQ-----LPDRCYAL--TVRYP-LMVVGT-ADRNL 152 (194)
Q Consensus 87 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~-----~~~~~~~~-----~~~~~~~~--~~~~~-~l~~~~-~dg~v 152 (194)
...++..+...+....|+.+-.+..|..+|.+. .+.+.... .....+++ .++++ +|++.+ .+.+.
T Consensus 178 -lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 178 -MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp -CSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred -CCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 346788999998888888898887777777552 23333332 12345666 45555 666666 46789
Q ss_pred EEEECCC
Q 039044 153 VVFNLQN 159 (194)
Q Consensus 153 ~~~d~~~ 159 (194)
.+||.+.
T Consensus 257 ~Vydr~~ 263 (355)
T 3amr_A 257 AIYDRQG 263 (355)
T ss_dssp EEEESST
T ss_pred EEEECCC
Confidence 9999973
No 302
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.67 E-value=0.006 Score=42.55 Aligned_cols=153 Identities=6% Similarity=-0.118 Sum_probs=90.5
Q ss_pred eeeEEEcCCC-CEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEec--CCCeEEEEecCCC
Q 039044 3 VSSLCFSPKA-NILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGG--CDKQVKMWPLLSG 79 (194)
Q Consensus 3 v~~~~~~p~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~ 79 (194)
...+++.+.+ .++.+-...+.|.+++++.... .............+++.|.+..|+.+. ..+.|...++...
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-----~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~ 155 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-----KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS 155 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE-----EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC
Confidence 3457777644 4444545567888888765432 111123345578999999766666554 3578888887643
Q ss_pred CceEEeccCCCcEEEEEecCCCCEEEEe-eCCCeEEEEeCCCCCceeEEe---cCCeEEEEecCCCEEEEEcCCCcEEEE
Q 039044 80 GQPVTVAMHDAPIKEVAWIPEMNLLATG-SWDKTLKYWDTRQPNPVHTQQ---LPDRCYALTVRYPLMVVGTADRNLVVF 155 (194)
Q Consensus 80 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~dg~v~~~ 155 (194)
.........-...+.++++|++..|..+ +..+.|..+|+.......... .....+++. .+..+.+-...+.|..+
T Consensus 156 ~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~ 234 (318)
T 3sov_A 156 SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILAC 234 (318)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEE
Confidence 3322223333567899999965555544 456889999987433222222 122345553 23344455556778888
Q ss_pred ECCCCC
Q 039044 156 NLQNPQ 161 (194)
Q Consensus 156 d~~~~~ 161 (194)
+..+++
T Consensus 235 ~~~~G~ 240 (318)
T 3sov_A 235 NKYTGE 240 (318)
T ss_dssp ETTTCC
T ss_pred ECCCCC
Confidence 886554
No 303
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.58 E-value=0.0092 Score=42.22 Aligned_cols=186 Identities=17% Similarity=0.108 Sum_probs=94.2
Q ss_pred eeeEEEcCC---CCEEEEeeC-C-----CeEEEEecccCCccccc-cccccc---CCCCCeeEEEEecCCCeEEEecC--
Q 039044 3 VSSLCFSPK---ANILVATSW-D-----NQVRCWEISRGGTGVAS-VPKASI---SHDHPVLCSTWKDDGTTVFSGGC-- 67 (194)
Q Consensus 3 v~~~~~~p~---~~~l~~~~~-d-----~~i~i~~~~~~~~~~~~-~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~-- 67 (194)
...|+++|+ +..|+.+.. . +.|..++.......... ...... ........++|.|+|.+.++-+.
T Consensus 77 p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~ 156 (352)
T 2ism_A 77 LLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVY 156 (352)
T ss_dssp EEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTT
T ss_pred ceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCC
Confidence 568999998 555554443 2 56777776643110000 111111 11123468999999976665432
Q ss_pred -----------CCeEEEEecCCC------------CceEEe-ccCCCcEEEEEecC-CCCEEEEeeCCCe--------EE
Q 039044 68 -----------DKQVKMWPLLSG------------GQPVTV-AMHDAPIKEVAWIP-EMNLLATGSWDKT--------LK 114 (194)
Q Consensus 68 -----------d~~i~~~d~~~~------------~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~~--------v~ 114 (194)
.|.|.-++.... .....+ .++ .....++|+| ++.++++-...+. |.
T Consensus 157 ~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~ 235 (352)
T 2ism_A 157 ERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVN 235 (352)
T ss_dssp CGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEE
T ss_pred CCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEE
Confidence 256666665430 111111 222 3467889999 6665554433222 44
Q ss_pred EEeCCC----------------CCceeEEec--CCeEEEEecCCCEEEEEcCCCcEEEEECCCCCee-----eEEeeCCC
Q 039044 115 YWDTRQ----------------PNPVHTQQL--PDRCYALTVRYPLMVVGTADRNLVVFNLQNPQTE-----FKRINSPL 171 (194)
Q Consensus 115 vwd~~~----------------~~~~~~~~~--~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~-----~~~~~~~~ 171 (194)
+..... ..++..... ....+++ .++..+++....+.|...++...... ...... .
T Consensus 236 ~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~-~ 313 (352)
T 2ism_A 236 LIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS-G 313 (352)
T ss_dssp EECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE-S
T ss_pred EeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecc-c
Confidence 332111 011222211 1134455 46666666556677887777643311 111211 2
Q ss_pred cceeeEEEEecCCCeeEEEE
Q 039044 172 KYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 172 ~~~v~~i~~~p~~~~l~~~~ 191 (194)
...+..+++.|||..+++..
T Consensus 314 ~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 314 FGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp SCCEEEEEECTTSCEEEEEC
T ss_pred CCCeeEEEECCCCcEEEEEe
Confidence 35689999999998777653
No 304
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.51 E-value=0.011 Score=41.35 Aligned_cols=119 Identities=13% Similarity=0.140 Sum_probs=84.8
Q ss_pred CCCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecCCeEEEEec-CCCEEEE
Q 039044 67 CDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTV-RYPLMVV 145 (194)
Q Consensus 67 ~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 145 (194)
.+..|.+.|+..++.+.+.. -..-+.-.+|..+.++.-. ..++.++|+++.+.++.+..+...+-|.+ +.+.|+.
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrp---i~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~l 122 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVAL 122 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEE---CCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEE
T ss_pred CCCEEEEEECCCCCCccccc---cccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEE
Confidence 34479999998877653321 1223445688888777665 78999999999999999999888887877 4556666
Q ss_pred EcCCCcEEEEECCCCCeeeEEeeC---CCcceeeEEEEecCCCeeEEE
Q 039044 146 GTADRNLVVFNLQNPQTEFKRINS---PLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 146 ~~~dg~v~~~d~~~~~~~~~~~~~---~~~~~v~~i~~~p~~~~l~~~ 190 (194)
.+ +..|+-|++.....|.+.... -...+|.....+++.++++..
T Consensus 123 VT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~ 169 (365)
T 2xzh_A 123 VT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLT 169 (365)
T ss_dssp EE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEE
T ss_pred Ec-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEE
Confidence 66 456999999865555444332 224678888889999887653
No 305
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.50 E-value=0.019 Score=43.92 Aligned_cols=155 Identities=8% Similarity=0.011 Sum_probs=93.7
Q ss_pred eeeEEEcCCCCEEEEee-CCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEE-EecCCCeEEEEecCCCC
Q 039044 3 VSSLCFSPKANILVATS-WDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVF-SGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~ 80 (194)
+..++|++.+..|+.+. ..+.|..++++.... ........-.....+++.+.++.|+ +-...+.|.+.++....
T Consensus 42 ~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~----~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~ 117 (619)
T 3s94_A 42 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES----VQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL 117 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC---------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred eEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc----eEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC
Confidence 46788998665555444 457788887765421 0111222224678999999655554 55567899999987554
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEeeC--CCeEEEEeCCCCCceeEEe---cCCeEEEEecCCCEEEEEc-CCCcEEE
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGSW--DKTLKYWDTRQPNPVHTQQ---LPDRCYALTVRYPLMVVGT-ADRNLVV 154 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~-~dg~v~~ 154 (194)
........-.....+++.|.+.+|..... .+.|...++.......... .....+++++++..|+.+. ..+.|..
T Consensus 118 ~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~ 197 (619)
T 3s94_A 118 RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 197 (619)
T ss_dssp CEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEE
Confidence 43333344456789999996555444442 4677777776433322221 1236789998776666654 4667999
Q ss_pred EECCCCC
Q 039044 155 FNLQNPQ 161 (194)
Q Consensus 155 ~d~~~~~ 161 (194)
+|+....
T Consensus 198 ~~~dG~~ 204 (619)
T 3s94_A 198 SNLDGTN 204 (619)
T ss_dssp ESSSCCE
T ss_pred ecCCCCc
Confidence 9887543
No 306
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.49 E-value=0.012 Score=41.62 Aligned_cols=133 Identities=7% Similarity=-0.028 Sum_probs=77.1
Q ss_pred CCeEEEEecccCCccccccccccc-CCCCCeeEEEEecCCCeEEEecC-----------------CCeEEEEecCCCCce
Q 039044 21 DNQVRCWEISRGGTGVASVPKASI-SHDHPVLCSTWKDDGTTVFSGGC-----------------DKQVKMWPLLSGGQP 82 (194)
Q Consensus 21 d~~i~i~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~-----------------d~~i~~~d~~~~~~~ 82 (194)
+.+|.+|+++........ ..... ..-...+.+.+.++|.+.++... .|.|.-++. ++ .
T Consensus 138 ~s~ielf~~d~~~~~~~~-~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~ 213 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLH-LKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-V 213 (355)
T ss_dssp CCEEEEEEEETTTTEEEE-EEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-C
T ss_pred CCeEEEEEEECCCCEEEE-EeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-E
Confidence 467888888765321111 11111 22346789999999987776541 244554543 33 2
Q ss_pred EEeccCCCcEEEEEecCCCCEEEEee-CCCeEEEEeCCCC-Cce--eEEecC--CeEEEEec-CCCEEEEEcCC-CcEEE
Q 039044 83 VTVAMHDAPIKEVAWIPEMNLLATGS-WDKTLKYWDTRQP-NPV--HTQQLP--DRCYALTV-RYPLMVVGTAD-RNLVV 154 (194)
Q Consensus 83 ~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~vwd~~~~-~~~--~~~~~~--~~~~~~~~-~~~~l~~~~~d-g~v~~ 154 (194)
..+...-...+.++|+|+++.+..+. ..+.|..|++... +.. ..+..+ ...+++.+ +|++.+++..+ +.|..
T Consensus 214 ~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~ 293 (355)
T 3sre_A 214 RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIFF 293 (355)
T ss_dssp EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHHS
T ss_pred EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEEE
Confidence 33332335678999999998766654 5789999998643 221 122222 24678888 58877756533 23444
Q ss_pred EEC
Q 039044 155 FNL 157 (194)
Q Consensus 155 ~d~ 157 (194)
|+.
T Consensus 294 ~~P 296 (355)
T 3sre_A 294 YDA 296 (355)
T ss_dssp CCT
T ss_pred ECC
Confidence 443
No 307
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.48 E-value=0.013 Score=41.47 Aligned_cols=118 Identities=14% Similarity=0.083 Sum_probs=64.7
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcc-cccccccccCCCCCeeEEEEecC---CCeEEEec-C-------CCe
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTG-VASVPKASISHDHPVLCSTWKDD---GTTVFSGG-C-------DKQ 70 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~-~-------d~~ 70 (194)
...|+|.|+++.|+++...|.|++++....... .................++++|+ +..|+... . ...
T Consensus 20 P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~ 99 (353)
T 2g8s_A 20 PWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTA 99 (353)
T ss_dssp EEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEE
T ss_pred cEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeE
Confidence 468999999983444556799988874321100 00011111223446789999995 45555442 2 235
Q ss_pred EEEEecCCCC----ceEE-ecc------CCCcEEEEEecCCCCEEEEeeC-------------CCeEEEEeCCC
Q 039044 71 VKMWPLLSGG----QPVT-VAM------HDAPIKEVAWIPEMNLLATGSW-------------DKTLKYWDTRQ 120 (194)
Q Consensus 71 i~~~d~~~~~----~~~~-~~~------~~~~v~~~~~~~~~~~l~~~~~-------------d~~v~vwd~~~ 120 (194)
|..+++.... .... +.. .......++|.|+|.+.++.+. .|.|.-+|...
T Consensus 100 v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 100 VGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp EEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTS
T ss_pred EEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCC
Confidence 6666664331 1111 111 1122467999999977666543 24677777653
No 308
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.38 E-value=0.022 Score=41.85 Aligned_cols=107 Identities=11% Similarity=0.164 Sum_probs=60.2
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccc-ccccccc--CCCCCeeEEEEecC---CCeEEEecC---------
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVA-SVPKASI--SHDHPVLCSTWKDD---GTTVFSGGC--------- 67 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~-~~~~~~~--~~~~~i~~~~~~~~---~~~l~~~~~--------- 67 (194)
...|+|.|+|+++++-...+.|++++...+..... ....... .....+..|+|+|+ +..|+....
T Consensus 29 P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~ 108 (454)
T 1cru_A 29 PHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDK 108 (454)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--C
T ss_pred ceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcc
Confidence 46899999999777755445788887543322110 0111111 13456789999995 555554432
Q ss_pred ----CCeEEEEecCCCC-------ceE-Eec-cCCCcEEEEEecCCCCEEEEeeC
Q 039044 68 ----DKQVKMWPLLSGG-------QPV-TVA-MHDAPIKEVAWIPEMNLLATGSW 109 (194)
Q Consensus 68 ----d~~i~~~d~~~~~-------~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~~ 109 (194)
...|.-++..... .+. .+. ........|+|.|+|.+.++.+.
T Consensus 109 ~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 109 ELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 2345556553321 111 121 11234789999999988777553
No 309
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.31 E-value=0.027 Score=41.37 Aligned_cols=100 Identities=8% Similarity=0.096 Sum_probs=58.4
Q ss_pred CCeeEEEEecCCCeEEEecCCCeEEEEecCCCCceE--Eecc------CCCcEEEEEecCC---CCEE-EEeeC------
Q 039044 48 HPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPV--TVAM------HDAPIKEVAWIPE---MNLL-ATGSW------ 109 (194)
Q Consensus 48 ~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~--~~~~------~~~~v~~~~~~~~---~~~l-~~~~~------ 109 (194)
.....|+|.|+|+++++-...+.|++++...++... .+.. ....+..|+|+|+ +.+| ++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 456799999999877776544578888765554321 2221 2456779999994 4444 43332
Q ss_pred ------CCeEEEEeCCCCC-------cee-EEe----cCCeEEEEecCCCEEEEEc
Q 039044 110 ------DKTLKYWDTRQPN-------PVH-TQQ----LPDRCYALTVRYPLMVVGT 147 (194)
Q Consensus 110 ------d~~v~vwd~~~~~-------~~~-~~~----~~~~~~~~~~~~~~l~~~~ 147 (194)
...|.-++..... .+. .+. +....+.|.|+|.+.++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 2345556543221 111 111 1235789999998766644
No 310
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.28 E-value=0.028 Score=40.97 Aligned_cols=119 Identities=13% Similarity=0.140 Sum_probs=83.5
Q ss_pred CCCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecCCeEEEEec-CCCEEEE
Q 039044 67 CDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTV-RYPLMVV 145 (194)
Q Consensus 67 ~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 145 (194)
.+..|.|.|+..+..+.+-. -..-+.-.+|..+.++--. ..++.++|+++.+.++.+..+...+-|.+ +.+.|+.
T Consensus 46 ~~~~vvIiDl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~l 121 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVAL 121 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEE---CCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEE
T ss_pred CCCeEEEEECCCCCcceecc---cccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEE
Confidence 34579999998877653321 1223455788877777665 78999999999999999888776666665 4556666
Q ss_pred EcCCCcEEEEECCCCCeeeEEeeC---CCcceeeEEEEecCCCeeEEE
Q 039044 146 GTADRNLVVFNLQNPQTEFKRINS---PLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 146 ~~~dg~v~~~d~~~~~~~~~~~~~---~~~~~v~~i~~~p~~~~l~~~ 190 (194)
.+ +..|+-|++.....|.+.... -...+|.....++++++++..
T Consensus 122 VT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~ 168 (494)
T 1bpo_A 122 VT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLT 168 (494)
T ss_dssp EC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEE
T ss_pred Ec-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEE
Confidence 66 456999999765545444332 224678888889999987753
No 311
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.26 E-value=0.025 Score=40.06 Aligned_cols=187 Identities=11% Similarity=0.007 Sum_probs=96.4
Q ss_pred eeeEEEcCC---CCEEEEeeC----C----CeEEEEecccCCcccc--c-cccccc-CCCCCeeEEEEecCCCeEEEecC
Q 039044 3 VSSLCFSPK---ANILVATSW----D----NQVRCWEISRGGTGVA--S-VPKASI-SHDHPVLCSTWKDDGTTVFSGGC 67 (194)
Q Consensus 3 v~~~~~~p~---~~~l~~~~~----d----~~i~i~~~~~~~~~~~--~-~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~ 67 (194)
...|+++|+ +..|+.+.. + ..|..|+......... . ...... ........+.|.|||.+.++-+.
T Consensus 75 ~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~ 154 (354)
T 3a9g_A 75 LLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGD 154 (354)
T ss_dssp EEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCC
T ss_pred eeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECC
Confidence 568999997 445544432 2 5676777654311000 0 001111 11123467999999987666432
Q ss_pred -------------CCeEEEEecCCCC-------ceEEe-ccCCCcEEEEEecC-CCCEEEEeeCCC---eEEEEeCCC--
Q 039044 68 -------------DKQVKMWPLLSGG-------QPVTV-AMHDAPIKEVAWIP-EMNLLATGSWDK---TLKYWDTRQ-- 120 (194)
Q Consensus 68 -------------d~~i~~~d~~~~~-------~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~---~v~vwd~~~-- 120 (194)
.|.|.-++....- ....+ .++ .....++|+| +++++++-...+ .|.+.....
T Consensus 155 ~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~ny 233 (354)
T 3a9g_A 155 AADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNY 233 (354)
T ss_dssp TTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBC
T ss_pred CCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcC
Confidence 2456666654220 11112 223 3356899999 666555433221 244332111
Q ss_pred --------------CCceeEE-e--cCCeEEEE-------ecCCCEEEEEcCCCcEEEEECCCCCee--eEEeeCCCcce
Q 039044 121 --------------PNPVHTQ-Q--LPDRCYAL-------TVRYPLMVVGTADRNLVVFNLQNPQTE--FKRINSPLKYQ 174 (194)
Q Consensus 121 --------------~~~~~~~-~--~~~~~~~~-------~~~~~~l~~~~~dg~v~~~d~~~~~~~--~~~~~~~~~~~ 174 (194)
..++... . .....+.+ ..++.++++....+.|...++...... ...+.......
T Consensus 234 Gwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~r 313 (354)
T 3a9g_A 234 GWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGR 313 (354)
T ss_dssp CTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCC
T ss_pred CCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCC
Confidence 0122222 1 11234555 256666666666778888888753211 12222222457
Q ss_pred eeEEEEecCCCeeEEE
Q 039044 175 TRCVAAFPDQQGFLVC 190 (194)
Q Consensus 175 v~~i~~~p~~~~l~~~ 190 (194)
+..+++.|||..+++.
T Consensus 314 p~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 314 LRDVVIDDDGGILIST 329 (354)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred eeEEEECCCCcEEEEE
Confidence 8999999999877765
No 312
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.24 E-value=0.022 Score=39.05 Aligned_cols=147 Identities=14% Similarity=0.180 Sum_probs=75.6
Q ss_pred CCCEEEEeeCC-----CeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCC-----CeEEEEecCCCC
Q 039044 11 KANILVATSWD-----NQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCD-----KQVKMWPLLSGG 80 (194)
Q Consensus 11 ~~~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~ 80 (194)
++.+++.|+.+ ..+.+||..+.....................+.. +++.++.|+.+ ..+.+||..+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 45667777754 3578888776541000111111111111222222 56677777654 358889987654
Q ss_pred ceE--EeccCCCcEEEEEecCCCCEEEEeeCC-----CeEEEEeCCCCCceeEEecCC---eEEEEecCCCEEEEEcCC-
Q 039044 81 QPV--TVAMHDAPIKEVAWIPEMNLLATGSWD-----KTLKYWDTRQPNPVHTQQLPD---RCYALTVRYPLMVVGTAD- 149 (194)
Q Consensus 81 ~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~d- 149 (194)
-.. .+......-..+.+ ++++++.|+.+ ..+.+||+.+.+....-..+. ...+...++..++.|+.+
T Consensus 140 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 217 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDG 217 (301)
T ss_dssp EEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred EEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCC
Confidence 322 11111111112222 66777777754 468899988765433222211 112223366677777654
Q ss_pred ----CcEEEEECCCCC
Q 039044 150 ----RNLVVFNLQNPQ 161 (194)
Q Consensus 150 ----g~v~~~d~~~~~ 161 (194)
..+.+||+.+.+
T Consensus 218 ~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 218 TAHLSSVEAYNIRTDS 233 (301)
T ss_dssp SSBCCCEEEEETTTTE
T ss_pred CcccceEEEEeCCCCc
Confidence 458999998764
No 313
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.18 E-value=0.049 Score=41.79 Aligned_cols=155 Identities=7% Similarity=-0.090 Sum_probs=97.6
Q ss_pred eeeEEEcCCCCEEE-EeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEE-EecCCCeEEEEecCCCC
Q 039044 3 VSSLCFSPKANILV-ATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVF-SGGCDKQVKMWPLLSGG 80 (194)
Q Consensus 3 v~~~~~~p~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~ 80 (194)
+..++|++.+..|+ +-..++.|..++++.... .............+++.+.+..|+ +-...+.|.+.++....
T Consensus 39 ~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-----~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 39 ASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-----EHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred eEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-----EEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc
Confidence 45789998655554 445578888888765432 111111223567899987665554 44557889999987554
Q ss_pred ceEEeccCCCcEEEEEecCCCCEEEEee--CCCeEEEEeCCCCCceeEEe--cCCeEEEEecCCCEEEEEcC-CCcEEEE
Q 039044 81 QPVTVAMHDAPIKEVAWIPEMNLLATGS--WDKTLKYWDTRQPNPVHTQQ--LPDRCYALTVRYPLMVVGTA-DRNLVVF 155 (194)
Q Consensus 81 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~-dg~v~~~ 155 (194)
....+...-.....+++.|...+|.... ..+.|...++.......... .....+++++++..|+.+.. .+.|..+
T Consensus 114 ~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~ 193 (628)
T 4a0p_A 114 RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESS 193 (628)
T ss_dssp CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEE
Confidence 3333333445678999998544444443 25688888876544332222 23367899998777666654 6779999
Q ss_pred ECCCCCe
Q 039044 156 NLQNPQT 162 (194)
Q Consensus 156 d~~~~~~ 162 (194)
|+.....
T Consensus 194 d~dG~~~ 200 (628)
T 4a0p_A 194 NMLGLNR 200 (628)
T ss_dssp ETTSCSC
T ss_pred cCCCCce
Confidence 9976543
No 314
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.15 E-value=0.029 Score=38.59 Aligned_cols=144 Identities=8% Similarity=0.129 Sum_probs=73.3
Q ss_pred CCCEEEEeeCC----CeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCC------CeEEEEecCCCC
Q 039044 11 KANILVATSWD----NQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCD------KQVKMWPLLSGG 80 (194)
Q Consensus 11 ~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------~~i~~~d~~~~~ 80 (194)
++.+++.|+.+ ..+.+||..+..- ...............+.+ +++.++.|+.+ ..+.+||..+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W---~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSW---YSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEE---EEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeE---EECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 45667777654 5677788766532 111111111111122222 56677777755 458889987654
Q ss_pred ceEE--eccCCCcEEEEEecCCCCEEEEeeC---------CCeEEEEeCCCCCceeEEecCC---eEEEEecCCCEEEEE
Q 039044 81 QPVT--VAMHDAPIKEVAWIPEMNLLATGSW---------DKTLKYWDTRQPNPVHTQQLPD---RCYALTVRYPLMVVG 146 (194)
Q Consensus 81 ~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~v~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~ 146 (194)
-... +......-..+. -++++++.|+. -..+.+||+.+.+....-..+. ...+...+++.++.|
T Consensus 130 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~G 207 (306)
T 3ii7_A 130 WHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVG 207 (306)
T ss_dssp EEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEC
T ss_pred eEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEe
Confidence 2221 111111111222 25667776654 3458899988765433222211 112222366667776
Q ss_pred cCC-----CcEEEEECCCCC
Q 039044 147 TAD-----RNLVVFNLQNPQ 161 (194)
Q Consensus 147 ~~d-----g~v~~~d~~~~~ 161 (194)
+.+ ..+.+||+.+.+
T Consensus 208 G~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 208 GQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp CEETTEEBCCEEEEETTTTE
T ss_pred CCCCCCCCceEEEeeCCCCc
Confidence 653 358899998754
No 315
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.08 E-value=0.04 Score=38.93 Aligned_cols=106 Identities=16% Similarity=0.111 Sum_probs=62.6
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccc-cccccccCCCCCeeEEEEecC---CCeEEEe---cCCCeEEEEe
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVA-SVPKASISHDHPVLCSTWKDD---GTTVFSG---GCDKQVKMWP 75 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~---~~~l~~~---~~d~~i~~~d 75 (194)
...|+|.|+++++++--..|.|++++...+..... ...............|+++|+ +..|+.. ..++.|.-|.
T Consensus 34 P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~ 113 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRML 113 (347)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEE
T ss_pred ceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEE
Confidence 46899999999777765589998887544332100 011122334567899999995 3444432 2445666666
Q ss_pred cCCCC--------ceE---Eec-cCCCcEEEEEecCCCCEEEEee
Q 039044 76 LLSGG--------QPV---TVA-MHDAPIKEVAWIPEMNLLATGS 108 (194)
Q Consensus 76 ~~~~~--------~~~---~~~-~~~~~v~~~~~~~~~~~l~~~~ 108 (194)
+..+. ... .+. ........|+|.|+|.+.++.+
T Consensus 114 ~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 114 YDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp BCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred eCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 55421 111 121 1122346799999998877765
No 316
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.06 E-value=0.037 Score=38.29 Aligned_cols=125 Identities=7% Similarity=-0.066 Sum_probs=72.8
Q ss_pred EEEecCCCeEEEec----CCCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeC-CCeEEEEeCCCCCceeEE
Q 039044 53 STWKDDGTTVFSGG----CDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSW-DKTLKYWDTRQPNPVHTQ 127 (194)
Q Consensus 53 ~~~~~~~~~l~~~~----~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~v~vwd~~~~~~~~~~ 127 (194)
..|++++++|+-.. .+..|...++... ....+..+.. .+++++++.|.-.+. ...|.+.++..+......
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs-~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~ 183 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGE-EKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFY 183 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSC-CCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCC-CeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEe
Confidence 36788888888664 3445666666543 3444544432 456778887776654 578888888765433323
Q ss_pred ecCCeEEEEecCCCEEEEEcCC--CcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 128 QLPDRCYALTVRYPLMVVGTAD--RNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 128 ~~~~~~~~~~~~~~~l~~~~~d--g~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
... ....+.|++.+|+-...+ ..|..-++..... ..+.. ..+ ..|+|+++.|..+
T Consensus 184 ~~~-~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~--~~Lt~---~~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 184 DCN-CYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNP--VVLTE---ANI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp CSC-EEEEEEEETTEEEEEEGGGTTEEEEECSSSCCC--EECSC---SCE--EEEEEETTEEEEE
T ss_pred CCC-ccceeeecCCEEEEEEcCCCcEEEEEECCCCCe--EEEeC---CCc--ceEEECCCEEEEE
Confidence 322 233466888888776543 3566666665442 22211 112 3377778777654
No 317
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.05 E-value=0.066 Score=41.06 Aligned_cols=169 Identities=7% Similarity=-0.072 Sum_probs=103.6
Q ss_pred EEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEE-EecCCCeEEEEecCCCCceEEeccCCCcE
Q 039044 14 ILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVF-SGGCDKQVKMWPLLSGGQPVTVAMHDAPI 92 (194)
Q Consensus 14 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~v 92 (194)
+|+.+ ....|+..+++.... . .......-.....++|++.+..|+ +-..++.|..+++........+.......
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~---~-~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P 82 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNN---N-VAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYP 82 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTC---E-EECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred EEEEE-eCCcEEEEECCCCCc---c-eEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCc
Confidence 44444 456799999876532 1 111112234578999999766665 44567889999987654433333333457
Q ss_pred EEEEecCCC-CEEEEeeCCCeEEEEeCCCCCceeEEe---cCCeEEEEecCCCEEEEEcC--CCcEEEEECCCCCeeeEE
Q 039044 93 KEVAWIPEM-NLLATGSWDKTLKYWDTRQPNPVHTQQ---LPDRCYALTVRYPLMVVGTA--DRNLVVFNLQNPQTEFKR 166 (194)
Q Consensus 93 ~~~~~~~~~-~~l~~~~~d~~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~--dg~v~~~d~~~~~~~~~~ 166 (194)
..+++.+.+ +++++-...+.|.+.++.......... ...+.++++|....|+.... .+.|...++.......
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~-- 160 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTT-- 160 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE--
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEE--
Confidence 788988754 455555557889999987543222221 23468899986666666552 5678888887654322
Q ss_pred eeCCCcceeeEEEEecCCCeeEEE
Q 039044 167 INSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 167 ~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
+.. .-.....++++++++.|..+
T Consensus 161 l~~-~~~~P~GlalD~~~~~LY~a 183 (628)
T 4a0p_A 161 LVP-NVGRANGLTIDYAKRRLYWT 183 (628)
T ss_dssp EEC-SCSSEEEEEEETTTTEEEEE
T ss_pred EEC-CCCCcceEEEccccCEEEEE
Confidence 222 23456889999987766554
No 318
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.04 E-value=0.041 Score=38.41 Aligned_cols=178 Identities=7% Similarity=-0.016 Sum_probs=91.0
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.+.++.+.+.+..+++ +.+|.| |...++...-.............+..+.+.+ ++ ++.++..+.|.. ....++.
T Consensus 37 ~~~~v~~~~~~~~~~~-G~~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~t 110 (327)
T 2xbg_A 37 TILDMSFIDRHHGWLV-GVNATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQS 110 (327)
T ss_dssp CEEEEEESSSSCEEEE-ETTTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTSS
T ss_pred cEEEEEECCCCcEEEE-cCCCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCCC
Confidence 4678888877777775 456754 3333322100011111112245688999986 44 444456665443 2233443
Q ss_pred eEEec---cCCCcEEEEEecCCCCEEEEeeCCCeEE-EEeCCCCCceeEEe----cCCeEEEEecCCCEEEEEcCCCcEE
Q 039044 82 PVTVA---MHDAPIKEVAWIPEMNLLATGSWDKTLK-YWDTRQPNPVHTQQ----LPDRCYALTVRYPLMVVGTADRNLV 153 (194)
Q Consensus 82 ~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~v~-vwd~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~dg~v~ 153 (194)
-.... .+...+..+.+.+++..++.+ .++.|. -.| .++.-.... .....+.+.+++.+++.+...+..+
T Consensus 111 W~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~ 187 (327)
T 2xbg_A 111 WSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYS 187 (327)
T ss_dssp CEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESS--TTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEE
T ss_pred ceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcC--CCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEE
Confidence 22222 233557788877777666655 455443 222 232222221 1234567788888777665443333
Q ss_pred EEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 154 VFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 154 ~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
-.|-. +. .......+....+..+.+.|+++.++++
T Consensus 188 S~d~g-G~-tW~~~~~~~~~~~~~~~~~~~g~~~~~~ 222 (327)
T 2xbg_A 188 TWEPG-QT-AWEPHNRTTSRRLHNMGFTPDGRLWMIV 222 (327)
T ss_dssp EECTT-CS-SCEEEECCSSSCEEEEEECTTSCEEEEE
T ss_pred EeCCC-CC-ceeECCCCCCCccceeEECCCCCEEEEe
Confidence 33321 11 1222333345567888888888776654
No 319
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.94 E-value=0.048 Score=37.57 Aligned_cols=102 Identities=11% Similarity=0.149 Sum_probs=55.0
Q ss_pred CCCeEEEecCC-----CeEEEEecCCCCceE--EeccCCCcEEEEEecCCCCEEEEeeCC-----CeEEEEeCCCCCcee
Q 039044 58 DGTTVFSGGCD-----KQVKMWPLLSGGQPV--TVAMHDAPIKEVAWIPEMNLLATGSWD-----KTLKYWDTRQPNPVH 125 (194)
Q Consensus 58 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~vwd~~~~~~~~ 125 (194)
+++.++.|+.+ ..+.+||..+.+-.. .+......-..+.+ ++.+++.|+.+ ..+.+||+.+.+...
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 56677776643 358888887653221 11111111122222 66777777654 468899987765332
Q ss_pred EEecCC---eEEEEecCCCEEEEEcCC-----CcEEEEECCCCC
Q 039044 126 TQQLPD---RCYALTVRYPLMVVGTAD-----RNLVVFNLQNPQ 161 (194)
Q Consensus 126 ~~~~~~---~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~ 161 (194)
.-..+. ...+...++..++.|+.+ ..+.+||+.+.+
T Consensus 199 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp CCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 211111 111222366677777654 458999998754
No 320
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.88 E-value=0.063 Score=37.98 Aligned_cols=139 Identities=12% Similarity=0.058 Sum_probs=75.3
Q ss_pred CeeEEEEecCCCeEEEecCCCeEEEEecCCCCc---eEEe----ccCCCcEEEEEecCC----CCEEEEeeC-------C
Q 039044 49 PVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ---PVTV----AMHDAPIKEVAWIPE----MNLLATGSW-------D 110 (194)
Q Consensus 49 ~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~---~~~~----~~~~~~v~~~~~~~~----~~~l~~~~~-------d 110 (194)
....|+|.|+++.++.+...|.|++++.. +.. +..+ .........++++|+ +.+.++-.. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 45789999999834455568999999853 221 1111 112346789999995 444443322 2
Q ss_pred CeEEEEeCCCCC--c--eeE----Ee------cCCeEEEEecCCCEEEEEcC-------------CCcEEEEECCCCC--
Q 039044 111 KTLKYWDTRQPN--P--VHT----QQ------LPDRCYALTVRYPLMVVGTA-------------DRNLVVFNLQNPQ-- 161 (194)
Q Consensus 111 ~~v~vwd~~~~~--~--~~~----~~------~~~~~~~~~~~~~~l~~~~~-------------dg~v~~~d~~~~~-- 161 (194)
..|..+++.... . ... .. +....+.|.|++.+.++.+. .|.|.-++....-
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 356666664321 1 111 11 11247999999965554432 2456666665320
Q ss_pred -e--------eeEEeeCCCcceeeEEEEec-CCCeeEE
Q 039044 162 -T--------EFKRINSPLKYQTRCVAAFP-DQQGFLV 189 (194)
Q Consensus 162 -~--------~~~~~~~~~~~~v~~i~~~p-~~~~l~~ 189 (194)
. .......++. ....++|+| +|+.+++
T Consensus 178 ~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLN 214 (353)
T ss_dssp TCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEE
T ss_pred CCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEE
Confidence 0 0111222332 358899999 5554443
No 321
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.76 E-value=0.067 Score=36.66 Aligned_cols=144 Identities=13% Similarity=0.146 Sum_probs=72.2
Q ss_pred CCCEEEEeeCCC-----eEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCC-----eEEEEecCCCC
Q 039044 11 KANILVATSWDN-----QVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDK-----QVKMWPLLSGG 80 (194)
Q Consensus 11 ~~~~l~~~~~d~-----~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~ 80 (194)
++.+++.|+.++ .+.+||..+..- ............. +++. -+++.++.|+.++ .+.+||..+.+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W---~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 135 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQW---TSVANMRDRRSTL-GAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNE 135 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEE---EEECCCSSCCBSC-EEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCce---eeCCCCCccccce-EEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCe
Confidence 456677776543 477777765431 1111111111111 2222 2566777776553 47788877654
Q ss_pred ceEE--eccCCCcEEEEEecCCCCEEEEeeCC-------CeEEEEeCCCCCceeEEecCC---eEEEEecCCCEEEEEcC
Q 039044 81 QPVT--VAMHDAPIKEVAWIPEMNLLATGSWD-------KTLKYWDTRQPNPVHTQQLPD---RCYALTVRYPLMVVGTA 148 (194)
Q Consensus 81 ~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~v~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~ 148 (194)
-... +...... .+++. -++++++.|+.+ ..+.+||+.+.+....-..+. ...+...++..++.|+.
T Consensus 136 W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 213 (302)
T 2xn4_A 136 WFHVAPMNTRRSS-VGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGH 213 (302)
T ss_dssp EEEECCCSSCCBS-CEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCB
T ss_pred EeecCCCCCcccC-ceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCC
Confidence 2221 1111111 12222 256677776643 358899988765433222211 11222336677777765
Q ss_pred C-----CcEEEEECCCCC
Q 039044 149 D-----RNLVVFNLQNPQ 161 (194)
Q Consensus 149 d-----g~v~~~d~~~~~ 161 (194)
+ ..+.+||+.+.+
T Consensus 214 ~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp SSSSBCCCEEEEETTTTE
T ss_pred CCCcccceEEEEeCCCCC
Confidence 4 368899998754
No 322
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.74 E-value=0.069 Score=36.55 Aligned_cols=144 Identities=10% Similarity=0.092 Sum_probs=74.8
Q ss_pred CCCEEEEee-CC-----CeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCC-----CeEEEEecCCC
Q 039044 11 KANILVATS-WD-----NQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCD-----KQVKMWPLLSG 79 (194)
Q Consensus 11 ~~~~l~~~~-~d-----~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~ 79 (194)
++.+++.|+ .+ ..+.+||..+..- ............. ++. ..+++.++.|+.+ ..+.+||..+.
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W---~~~~~~p~~r~~~-~~~-~~~~~l~v~GG~~~~~~~~~~~~~d~~~~ 88 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEW---SFLPSITRKRRYV-ASV-SLHDRIYVIGGYDGRSRLSSVECLDYTAD 88 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEE---EECCCCSSCCBSC-EEE-EETTEEEEECCBCSSCBCCCEEEEETTCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeE---EeCCCCChhhccc-cEE-EECCEEEEEcCCCCCccCceEEEEECCCC
Confidence 345677776 33 3577888766532 1111111111111 222 2356677777755 46889998876
Q ss_pred C---ceEE--eccCCCcEEEEEecCCCCEEEEeeCC-----CeEEEEeCCCCCceeEEecCC---eEEEEecCCCEEEEE
Q 039044 80 G---QPVT--VAMHDAPIKEVAWIPEMNLLATGSWD-----KTLKYWDTRQPNPVHTQQLPD---RCYALTVRYPLMVVG 146 (194)
Q Consensus 80 ~---~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~ 146 (194)
+ -... +......-..+.+ ++++++.|+.+ ..+.+||+.+.+....-..+. ...+...+++.++.|
T Consensus 89 ~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~G 166 (301)
T 2vpj_A 89 EDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLG 166 (301)
T ss_dssp TTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEEC
T ss_pred CCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEEC
Confidence 6 2221 1111111122222 56777777654 368899988765433222221 112223366677777
Q ss_pred cCC-----CcEEEEECCCCC
Q 039044 147 TAD-----RNLVVFNLQNPQ 161 (194)
Q Consensus 147 ~~d-----g~v~~~d~~~~~ 161 (194)
+.+ ..+.+||+.+.+
T Consensus 167 G~~~~~~~~~~~~~d~~~~~ 186 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGH 186 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTE
T ss_pred CCCCCcccceEEEEeCCCCc
Confidence 654 458899988764
No 323
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.73 E-value=0.07 Score=36.54 Aligned_cols=144 Identities=15% Similarity=0.132 Sum_probs=73.3
Q ss_pred CCCEEEEeeCCC-----eEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCC-------CeEEEEecCC
Q 039044 11 KANILVATSWDN-----QVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCD-------KQVKMWPLLS 78 (194)
Q Consensus 11 ~~~~l~~~~~d~-----~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------~~i~~~d~~~ 78 (194)
++.+++.|+.++ .+.+||..+..- ............ .++.. -+++.++.|+.+ ..+.+||..+
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W---~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEW---FHVAPMNTRRSS-VGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEE---EEECCCSSCCBS-CEEEE-ETTEEEEECCEETTTTEECCCEEEEETTT
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeE---eecCCCCCcccC-ceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCC
Confidence 456667776553 466777665431 111111111111 12222 256666666543 3588899876
Q ss_pred CCceEE--eccCCCcEEEEEecCCCCEEEEeeCC-----CeEEEEeCCCCCceeEEecCC---eEEEEecCCCEEEEEcC
Q 039044 79 GGQPVT--VAMHDAPIKEVAWIPEMNLLATGSWD-----KTLKYWDTRQPNPVHTQQLPD---RCYALTVRYPLMVVGTA 148 (194)
Q Consensus 79 ~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~ 148 (194)
.+-... +.........+.+ ++++++.|+.+ ..+.+||+.+.+.......+. ...+...+++.++.|+.
T Consensus 183 ~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~ 260 (302)
T 2xn4_A 183 NEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGD 260 (302)
T ss_dssp TEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCB
T ss_pred CcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCc
Confidence 542211 1111111122222 56777777764 468899998765433222211 11223336677777776
Q ss_pred CC-----cEEEEECCCCC
Q 039044 149 DR-----NLVVFNLQNPQ 161 (194)
Q Consensus 149 dg-----~v~~~d~~~~~ 161 (194)
++ .+.+||+.+.+
T Consensus 261 ~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 261 DGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CSSSBCCCEEEEETTTTE
T ss_pred CCCcccccEEEEcCCCCe
Confidence 53 48999998754
No 324
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.72 E-value=0.085 Score=37.26 Aligned_cols=102 Identities=16% Similarity=0.085 Sum_probs=60.3
Q ss_pred CCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec---------CCeEEEEecC---CCEEEEE---cCCCcE
Q 039044 88 HDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL---------PDRCYALTVR---YPLMVVG---TADRNL 152 (194)
Q Consensus 88 ~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~---------~~~~~~~~~~---~~~l~~~---~~dg~v 152 (194)
.-.....|+|.|+|.++++--..|.|++++...++....... ....++++|+ ...|+.. ..++.|
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 345678999999999777665589999998765543211111 1247888885 3444443 234456
Q ss_pred EEEECCCC----------CeeeEEeeCCCcceeeEEEEecCCCeeEE
Q 039044 153 VVFNLQNP----------QTEFKRINSPLKYQTRCVAAFPDQQGFLV 189 (194)
Q Consensus 153 ~~~d~~~~----------~~~~~~~~~~~~~~v~~i~~~p~~~~l~~ 189 (194)
.-|.+... +..+..+..........|.|.|||..+++
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt 156 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAG 156 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEE
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEE
Confidence 55655431 11111222222334578999999976665
No 325
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.68 E-value=0.14 Score=39.24 Aligned_cols=171 Identities=9% Similarity=-0.072 Sum_probs=98.7
Q ss_pred EEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEe-cCCCeEEEEecCCCCceEEeccCCCcE
Q 039044 14 ILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSG-GCDKQVKMWPLLSGGQPVTVAMHDAPI 92 (194)
Q Consensus 14 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~v 92 (194)
+|+.+. .+.|+..++....... .......-..+..++|++.+..|+.+ ...+.|+.+++........+...-...
T Consensus 319 ~Ll~~~-~~~i~~i~l~~~~~~~---~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p 394 (619)
T 3s94_A 319 LLLLAR-RTDLRRISLDTPDFTD---IVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHP 394 (619)
T ss_dssp EEEEEE-SSCEEEEESSSTTCCC---EECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred EEEEEc-ccceEEEecCCCccce---eEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCc
Confidence 344433 4467777776543210 01111123457789999966555544 457889999987654433333333567
Q ss_pred EEEEecC-CCCEEEEeeCCCeEEEEeCCCCCceeEEe---cCCeEEEEecCCCEEEEEcC--CCcEEEEECCCCCeeeEE
Q 039044 93 KEVAWIP-EMNLLATGSWDKTLKYWDTRQPNPVHTQQ---LPDRCYALTVRYPLMVVGTA--DRNLVVFNLQNPQTEFKR 166 (194)
Q Consensus 93 ~~~~~~~-~~~~l~~~~~d~~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~--dg~v~~~d~~~~~~~~~~ 166 (194)
..+++.+ .+++.++-+..+.|.+.++.......... ...+.+++.|....|+.... .+.|...++...... .
T Consensus 395 ~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~-~- 472 (619)
T 3s94_A 395 DGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRV-V- 472 (619)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-E-
T ss_pred CceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccE-E-
Confidence 7899986 45556665667899999987543222221 23468899987555555442 356777777654322 1
Q ss_pred eeCCCcceeeEEEEecCCCeeEEE
Q 039044 167 INSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 167 ~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
+....-...+.|++++++..|..+
T Consensus 473 l~~~~l~~P~GlalD~~~~~LY~a 496 (619)
T 3s94_A 473 LVNTSLGWPNGLALDYDEGKIYWG 496 (619)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEE
T ss_pred EEeCCCCCCeeeEEcccCCEEEEE
Confidence 222223456788888876666554
No 326
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.59 E-value=0.13 Score=37.64 Aligned_cols=120 Identities=9% Similarity=0.137 Sum_probs=77.5
Q ss_pred CCCeeEEEEecCCCeEEEec-------CCCeEEEEecCCCCceEEeccCCCcEEEEEecCC---CCEEEEeeCC---CeE
Q 039044 47 DHPVLCSTWKDDGTTVFSGG-------CDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPE---MNLLATGSWD---KTL 113 (194)
Q Consensus 47 ~~~i~~~~~~~~~~~l~~~~-------~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d---~~v 113 (194)
...|..-..+++.++++..+ -.|.+.+|..+.+ ..+.+.+|-.....+....+ ...++.+... +.+
T Consensus 150 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kL 228 (494)
T 1bpo_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKL 228 (494)
T ss_dssp TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEE
T ss_pred cceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEE
Confidence 45677777788888766332 2477889997653 44567777665555544321 1244444433 789
Q ss_pred EEEeCCCC---C-c--eeEEe--cC-------CeEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEe
Q 039044 114 KYWDTRQP---N-P--VHTQQ--LP-------DRCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRI 167 (194)
Q Consensus 114 ~vwd~~~~---~-~--~~~~~--~~-------~~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~ 167 (194)
++.++... . + .+..+ .+ ...+.+++....++.-+..|.+++||+.++...+...
T Consensus 229 hi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 229 HIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp EEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeec
Confidence 99998643 1 1 11111 11 1367788888899999999999999999998765543
No 327
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.54 E-value=0.1 Score=36.03 Aligned_cols=142 Identities=12% Similarity=0.046 Sum_probs=79.8
Q ss_pred EEEcCCCCEEEEee--CCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecC-CCeEEEEecCCCCce
Q 039044 6 LCFSPKANILVATS--WDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGC-DKQVKMWPLLSGGQP 82 (194)
Q Consensus 6 ~~~~p~~~~l~~~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~ 82 (194)
..|+|+++.|+-.. .++.-.||.+..... ....+..+.. ..++|+++.|+-.+. ...|.+.++..+...
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs----~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~ 180 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRIDGE----EKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEA 180 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETTSC----CCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECCCC----CeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEE
Confidence 46778888877665 344444554443321 1122222222 356778887775544 677888887665543
Q ss_pred EEeccCCCcEEEEEecCCCCEEEEeeCC--CeEEEEeCCCCCceeEEecCCeEEEEecCCCEEEEEcC--CCcEEEEECC
Q 039044 83 VTVAMHDAPIKEVAWIPEMNLLATGSWD--KTLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTA--DRNLVVFNLQ 158 (194)
Q Consensus 83 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--dg~v~~~d~~ 158 (194)
..+. .... ..+.|++.+|+-.... ..|..-++....... +. ......++|.+.+|+.+.. .+.|..-++.
T Consensus 181 ~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~-Lt-~~~~~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 181 LFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVV-LT-EANIEHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp EEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEE-CS-CSCEEEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred EEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEE-Ee-CCCcceEEECCCEEEEEECCCCcEEEEEECC
Confidence 3332 2222 3456888887766543 367677776544322 21 2223558888988887633 3557777776
Q ss_pred CCC
Q 039044 159 NPQ 161 (194)
Q Consensus 159 ~~~ 161 (194)
...
T Consensus 255 G~~ 257 (302)
T 3s25_A 255 GTG 257 (302)
T ss_dssp SCC
T ss_pred CCc
Confidence 543
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.50 E-value=0.02 Score=40.25 Aligned_cols=107 Identities=11% Similarity=0.051 Sum_probs=69.3
Q ss_pred CeEEEecCCCeEEEEecCCCCceEEeccC-CCcEEEEEec--C-CCCEEEEe-eCCCeEEEEeCCCCCceeEEecCC---
Q 039044 60 TTVFSGGCDKQVKMWPLLSGGQPVTVAMH-DAPIKEVAWI--P-EMNLLATG-SWDKTLKYWDTRQPNPVHTQQLPD--- 131 (194)
Q Consensus 60 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~l~~~-~~d~~v~vwd~~~~~~~~~~~~~~--- 131 (194)
..++.++.||.|.-+|.++|+....+... ..++....-. + ++..++.. +.||.|..+|..++.....+..+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46888999999999999999988877643 1222221100 1 22334333 579999999988875444333221
Q ss_pred -eEEEEe-----------cCCCEEEEEcCCCcEEEEECCCCCeeeEE
Q 039044 132 -RCYALT-----------VRYPLMVVGTADRNLVVFNLQNPQTEFKR 166 (194)
Q Consensus 132 -~~~~~~-----------~~~~~l~~~~~dg~v~~~d~~~~~~~~~~ 166 (194)
..+... ..+..+++|+.+|.+...|+++++.....
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 112211 14567899999999999999999865543
No 329
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.39 E-value=0.13 Score=35.32 Aligned_cols=143 Identities=10% Similarity=0.100 Sum_probs=73.9
Q ss_pred CCEEEEeeCC--CeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCC----CeEEEEecCCCCceEE-
Q 039044 12 ANILVATSWD--NQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCD----KQVKMWPLLSGGQPVT- 84 (194)
Q Consensus 12 ~~~l~~~~~d--~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----~~i~~~d~~~~~~~~~- 84 (194)
+.+++.|+.+ ..+.+||..+..- ...............+. -++..++.|+.+ ..+.+||..+.+-...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W---~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~ 86 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSW---TDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKL 86 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEE---EECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeCCCCCceEEEecCCCCCE---ecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECC
Confidence 3456666643 4688888776532 11111111111122222 256677777755 6788899877643221
Q ss_pred -eccCCCcEEEEEecCCCCEEEEeeCC------CeEEEEeCCCCCceeEEecCC---eEEEEecCCCEEEEEcC------
Q 039044 85 -VAMHDAPIKEVAWIPEMNLLATGSWD------KTLKYWDTRQPNPVHTQQLPD---RCYALTVRYPLMVVGTA------ 148 (194)
Q Consensus 85 -~~~~~~~v~~~~~~~~~~~l~~~~~d------~~v~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~------ 148 (194)
+......-..+.+ ++++++.|+.+ ..+.+||+.+.+....-..+. ...+...+++.++.|+.
T Consensus 87 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 164 (306)
T 3ii7_A 87 GPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVS 164 (306)
T ss_dssp CCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTT
T ss_pred CCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCc
Confidence 1111111122222 66777777765 468899988765433222211 11222336666666653
Q ss_pred ---CCcEEEEECCCCC
Q 039044 149 ---DRNLVVFNLQNPQ 161 (194)
Q Consensus 149 ---dg~v~~~d~~~~~ 161 (194)
-..+.+||+.+.+
T Consensus 165 ~~~~~~~~~yd~~~~~ 180 (306)
T 3ii7_A 165 GRVLNSCEVYDPATET 180 (306)
T ss_dssp CEECCCEEEEETTTTE
T ss_pred ccccceEEEeCCCCCe
Confidence 3448899998764
No 330
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.35 E-value=0.14 Score=35.36 Aligned_cols=102 Identities=11% Similarity=0.025 Sum_probs=54.9
Q ss_pred CCCeEEEecCC--------CeEEEEecCCCCceE--EeccCCCcEEEEEecCCCCEEEEeeC-C-----CeEEEEeCCCC
Q 039044 58 DGTTVFSGGCD--------KQVKMWPLLSGGQPV--TVAMHDAPIKEVAWIPEMNLLATGSW-D-----KTLKYWDTRQP 121 (194)
Q Consensus 58 ~~~~l~~~~~d--------~~i~~~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----~~v~vwd~~~~ 121 (194)
+++.++.|+.+ ..+.+||..+.+-.. .+...... .+++. .++++++.|+. + ..+.+||+.+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG-HTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc-eeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 56666677632 458889987653211 11111111 11222 35667777776 2 46889998876
Q ss_pred CceeEEecCC---eEEEEecCCCEEEEEcCCC-----cEEEEECCCCC
Q 039044 122 NPVHTQQLPD---RCYALTVRYPLMVVGTADR-----NLVVFNLQNPQ 161 (194)
Q Consensus 122 ~~~~~~~~~~---~~~~~~~~~~~l~~~~~dg-----~v~~~d~~~~~ 161 (194)
+....-..+. ...+...+++.++.|+.++ .+.+||+.+.+
T Consensus 176 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 176 EWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp EEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred eEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 5332222211 1122233667777776654 48889988764
No 331
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.23 E-value=0.18 Score=35.44 Aligned_cols=120 Identities=8% Similarity=0.110 Sum_probs=74.8
Q ss_pred CCCeeEEEEecCCCeEEEec-------CCCeEEEEecCCCCceEEeccCCCcEEEEEecCC---CCEEEEeeCC---CeE
Q 039044 47 DHPVLCSTWKDDGTTVFSGG-------CDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPE---MNLLATGSWD---KTL 113 (194)
Q Consensus 47 ~~~i~~~~~~~~~~~l~~~~-------~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d---~~v 113 (194)
...|..-..+++.++++..+ -.|.+.+|..+. +..+.+.+|-..-..+...-+ ...++.+... +.+
T Consensus 151 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kL 229 (365)
T 2xzh_A 151 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKL 229 (365)
T ss_dssp TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEE
T ss_pred cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEE
Confidence 45666777788888765432 236788999765 344567777655444433221 1234444332 589
Q ss_pred EEEeCCCC---Cc-e--eE--EecCC-------eEEEEecCCCEEEEEcCCCcEEEEECCCCCeeeEEe
Q 039044 114 KYWDTRQP---NP-V--HT--QQLPD-------RCYALTVRYPLMVVGTADRNLVVFNLQNPQTEFKRI 167 (194)
Q Consensus 114 ~vwd~~~~---~~-~--~~--~~~~~-------~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~ 167 (194)
++.++... .+ . +. +..+. ..+.+++....++.-+.-|.+++||+.++...+...
T Consensus 230 hIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nr 298 (365)
T 2xzh_A 230 HIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 298 (365)
T ss_dssp EEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEec
Confidence 99998543 11 1 11 11111 367778888899999999999999999998765543
No 332
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.07 E-value=0.15 Score=38.52 Aligned_cols=71 Identities=10% Similarity=-0.002 Sum_probs=50.7
Q ss_pred CCcEEEEEecCCCCEEEEee-CCCeEEEEeCCCC------Cc-------eeEEe--cCCeEEEEecCCCEEEEEcCCCcE
Q 039044 89 DAPIKEVAWIPEMNLLATGS-WDKTLKYWDTRQP------NP-------VHTQQ--LPDRCYALTVRYPLMVVGTADRNL 152 (194)
Q Consensus 89 ~~~v~~~~~~~~~~~l~~~~-~d~~v~vwd~~~~------~~-------~~~~~--~~~~~~~~~~~~~~l~~~~~dg~v 152 (194)
......+..+|||++++.++ .+.++.++|+++- +. ..+.+ ......+|.++|.-..+...|.+|
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceE
Confidence 34556788999999987766 4789999998742 11 11111 223578999999666667789999
Q ss_pred EEEECCC
Q 039044 153 VVFNLQN 159 (194)
Q Consensus 153 ~~~d~~~ 159 (194)
.-|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999875
No 333
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.97 E-value=0.41 Score=37.25 Aligned_cols=147 Identities=10% Similarity=0.100 Sum_probs=77.8
Q ss_pred CCCEEEEeeCCC------eEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCC--eEEEEecCCCCce
Q 039044 11 KANILVATSWDN------QVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDK--QVKMWPLLSGGQP 82 (194)
Q Consensus 11 ~~~~l~~~~~d~------~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~ 82 (194)
++.+++.|+.++ .+.+||..+..- ........ ...-.+++...+++.++.|+.++ .+.+||..+..-.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W---~~~~~~p~-~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~ 526 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREW---SMIKSLSH-TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFK 526 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEE---EECCCCSB-CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcE---EECCCCCC-CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceE
Confidence 666777776542 466777765421 11111111 11112233324778888887654 6889998765321
Q ss_pred EE-----eccCCCcEEEEEecCC-CCEEEEeeC--C-----CeEEEEeCCCCCc------eeEEec---C--CeEEEEec
Q 039044 83 VT-----VAMHDAPIKEVAWIPE-MNLLATGSW--D-----KTLKYWDTRQPNP------VHTQQL---P--DRCYALTV 138 (194)
Q Consensus 83 ~~-----~~~~~~~v~~~~~~~~-~~~l~~~~~--d-----~~v~vwd~~~~~~------~~~~~~---~--~~~~~~~~ 138 (194)
.. .......-..+.+..+ +++++.|+. + ..+.+||+.+.+. ...... + ........
T Consensus 527 ~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~ 606 (695)
T 2zwa_A 527 DVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYIT 606 (695)
T ss_dssp ECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEE
T ss_pred EccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeC
Confidence 11 1111112233555554 667777765 2 4688999988772 211111 1 12333333
Q ss_pred CCCEEEEEcC--------CCcEEEEECCCCC
Q 039044 139 RYPLMVVGTA--------DRNLVVFNLQNPQ 161 (194)
Q Consensus 139 ~~~~l~~~~~--------dg~v~~~d~~~~~ 161 (194)
++..++.|+. ...+.+||+.+.+
T Consensus 607 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 607 PRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp TTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred CCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 3677777764 3458999998765
No 334
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.88 E-value=0.34 Score=35.70 Aligned_cols=107 Identities=11% Similarity=-0.014 Sum_probs=59.2
Q ss_pred eeeEEEcCCCC-EEEEeeCCCeEEEEecccCCc--cccccccccc-----CCCCCeeEEEEecC----CCeEEEecC--C
Q 039044 3 VSSLCFSPKAN-ILVATSWDNQVRCWEISRGGT--GVASVPKASI-----SHDHPVLCSTWKDD----GTTVFSGGC--D 68 (194)
Q Consensus 3 v~~~~~~p~~~-~l~~~~~d~~i~i~~~~~~~~--~~~~~~~~~~-----~~~~~i~~~~~~~~----~~~l~~~~~--d 68 (194)
-..|+|.|++. .|+++.+.|.|++++...... .......... ........|+++|+ +.+.++-+. +
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 46899999986 455567789999997543211 1111111111 12467889999996 333333221 1
Q ss_pred ----------CeEEEEecCCC----------CceEEec--cCCCcEEEEEecCCCCEEEEeeC
Q 039044 69 ----------KQVKMWPLLSG----------GQPVTVA--MHDAPIKEVAWIPEMNLLATGSW 109 (194)
Q Consensus 69 ----------~~i~~~d~~~~----------~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~ 109 (194)
..|.-|.+..+ +.+..+. ........|+|.|||.+.++.++
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 13444655421 1122221 12234678999999988777664
No 335
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.80 E-value=0.27 Score=33.81 Aligned_cols=144 Identities=11% Similarity=0.115 Sum_probs=72.4
Q ss_pred CCCEEEEeeCC-----CeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCC-----CeEEEEecCCCC
Q 039044 11 KANILVATSWD-----NQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCD-----KQVKMWPLLSGG 80 (194)
Q Consensus 11 ~~~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~ 80 (194)
++++++.|+.+ ..+.+||..+..- ...............+.+ +++.++.|+.+ ..+.+||..+.+
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W---~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 195 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEW---HLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNE 195 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEE---EECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeE---eECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCe
Confidence 45566666543 3477777765431 111111111111122222 56677777654 458888887653
Q ss_pred ceE--EeccCCCcEEEEEecCCCCEEEEeeCC-----CeEEEEeCCCCCceeEEecCC---eEEEEecCCCEEEEEcCC-
Q 039044 81 QPV--TVAMHDAPIKEVAWIPEMNLLATGSWD-----KTLKYWDTRQPNPVHTQQLPD---RCYALTVRYPLMVVGTAD- 149 (194)
Q Consensus 81 ~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~d- 149 (194)
-.. .+......-..+.+ ++++++.|+.+ ..+.+||+.+.+.......+. ...+...+++.++.|+.+
T Consensus 196 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 273 (308)
T 1zgk_A 196 WRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDG 273 (308)
T ss_dssp EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred EeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCC
Confidence 211 11111111122222 66777777764 568999988765432212211 111222366677777654
Q ss_pred ----CcEEEEECCCCC
Q 039044 150 ----RNLVVFNLQNPQ 161 (194)
Q Consensus 150 ----g~v~~~d~~~~~ 161 (194)
..+.+||+.+.+
T Consensus 274 ~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 274 HTFLDSVECYDPDTDT 289 (308)
T ss_dssp SCBCCEEEEEETTTTE
T ss_pred CcccceEEEEcCCCCE
Confidence 347888887754
No 336
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.68 E-value=0.31 Score=33.61 Aligned_cols=140 Identities=11% Similarity=0.090 Sum_probs=69.8
Q ss_pred EEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecC-----C------CeEEEEecCCCCce
Q 039044 14 ILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGC-----D------KQVKMWPLLSGGQP 82 (194)
Q Consensus 14 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----d------~~i~~~d~~~~~~~ 82 (194)
+++.|+ ..+..||..+..-. ..................+++.++.|+. . ..+..||..+.+-.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~----~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~ 80 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECY----CASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL 80 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEE----EEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE
T ss_pred EEEEcC--CceEEECCCCCeEe----cCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE
Confidence 444555 46888998776421 1111111112222223346777777773 1 12777887765421
Q ss_pred EEeccCCCcE--EEEEecCCCCEEEEeeCC--------CeEEEEeCCCCCceeEEecCC---eEEEEecCCCEEEEEcC-
Q 039044 83 VTVAMHDAPI--KEVAWIPEMNLLATGSWD--------KTLKYWDTRQPNPVHTQQLPD---RCYALTVRYPLMVVGTA- 148 (194)
Q Consensus 83 ~~~~~~~~~v--~~~~~~~~~~~l~~~~~d--------~~v~vwd~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~- 148 (194)
.+.....+- .+++.. ++..++.|+.+ ..+.+||..+.+....-..+. ...+...+++.++.|+.
T Consensus 81 -~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 158 (315)
T 4asc_A 81 -GMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKG 158 (315)
T ss_dssp -ECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBC
T ss_pred -ECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCC
Confidence 111111110 112222 56677777642 458899988765332212111 12223346666777765
Q ss_pred C-----CcEEEEECCCCC
Q 039044 149 D-----RNLVVFNLQNPQ 161 (194)
Q Consensus 149 d-----g~v~~~d~~~~~ 161 (194)
+ ..+.+||+.+.+
T Consensus 159 ~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp TTSCBCCCEEEEETTTTE
T ss_pred CCCcccceEEEEeCCCCe
Confidence 2 358999988754
No 337
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.67 E-value=0.19 Score=37.94 Aligned_cols=106 Identities=15% Similarity=0.023 Sum_probs=65.8
Q ss_pred eeeEEEcCCCCEEEEeeC-CCeEEEEecccCCcc-------cccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEE
Q 039044 3 VSSLCFSPKANILVATSW-DNQVRCWEISRGGTG-------VASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMW 74 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~-d~~i~i~~~~~~~~~-------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~ 74 (194)
...+..+|||++++.++. +.++.++++...... ..........-.-...-.+|.++|+...+---|..|.-|
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEE
Confidence 457889999998887665 789999998742110 000011111233456788999999666667789999999
Q ss_pred ecCCC----------CceEEeccCCCcEEEEE-----ecCCCCEEEEee
Q 039044 75 PLLSG----------GQPVTVAMHDAPIKEVA-----WIPEMNLLATGS 108 (194)
Q Consensus 75 d~~~~----------~~~~~~~~~~~~v~~~~-----~~~~~~~l~~~~ 108 (194)
++... ..+..+..|-.+-...+ -.|+|++|++..
T Consensus 405 ni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 405 NMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred eccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 98642 23344555543322221 245788888764
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.54 E-value=0.35 Score=33.36 Aligned_cols=102 Identities=10% Similarity=0.110 Sum_probs=53.6
Q ss_pred CCCeEEEecCC-------CeEEEEecCCCCceEEeccCCCcE--EEEEecCCCCEEEEeeC------CCeEEEEeCCCCC
Q 039044 58 DGTTVFSGGCD-------KQVKMWPLLSGGQPVTVAMHDAPI--KEVAWIPEMNLLATGSW------DKTLKYWDTRQPN 122 (194)
Q Consensus 58 ~~~~l~~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~------d~~v~vwd~~~~~ 122 (194)
+++.++.|+.+ ..+.+||..+.+-.. +.....+. .+++. .++++++.|+. -..+.+||+.+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSE-VKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEE-ECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeE-CCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 56666777653 347788877653221 11111111 11222 36677777764 2458999998765
Q ss_pred ceeEEecCC---eEEEEecCCCEEEEEcCC-----CcEEEEECCCCC
Q 039044 123 PVHTQQLPD---RCYALTVRYPLMVVGTAD-----RNLVVFNLQNPQ 161 (194)
Q Consensus 123 ~~~~~~~~~---~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~ 161 (194)
....-..+. ...+...+++.++.|+.+ ..+.+||+.+.+
T Consensus 187 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 187 WKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 433222211 112223366667777643 347789988764
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.45 E-value=0.41 Score=33.58 Aligned_cols=92 Identities=11% Similarity=-0.056 Sum_probs=43.0
Q ss_pred CeEEEEecCCCCceE--EeccCCCcEEEEEecCCCCEEEEeeC------CCeEEEEeC--CCCCcee--EEecCC---eE
Q 039044 69 KQVKMWPLLSGGQPV--TVAMHDAPIKEVAWIPEMNLLATGSW------DKTLKYWDT--RQPNPVH--TQQLPD---RC 133 (194)
Q Consensus 69 ~~i~~~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~v~vwd~--~~~~~~~--~~~~~~---~~ 133 (194)
..+.+||..+.+-.. .+......-.+++.. ++++++.|+. ...+..||+ .+.+... ....+. ..
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 578899987654222 111111110222222 5566666654 345777876 4333221 111111 12
Q ss_pred EEEecCCCEEEEEcCC----------------------CcEEEEECCCCC
Q 039044 134 YALTVRYPLMVVGTAD----------------------RNLVVFNLQNPQ 161 (194)
Q Consensus 134 ~~~~~~~~~l~~~~~d----------------------g~v~~~d~~~~~ 161 (194)
.+...++..++.|+.+ ..+.+||+.+.+
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~ 296 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK 296 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCc
Confidence 2344466677777632 247889988754
No 340
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.33 E-value=1 Score=37.37 Aligned_cols=181 Identities=13% Similarity=0.051 Sum_probs=97.5
Q ss_pred CeeeEEEcCC------CCEEEEeeC-CCeEEEEecccCCcccccccccccCCCCCeeEEEEec--CCCeEEEecCCCeEE
Q 039044 2 SVSSLCFSPK------ANILVATSW-DNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD--DGTTVFSGGCDKQVK 72 (194)
Q Consensus 2 ~v~~~~~~p~------~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~d~~i~ 72 (194)
.|.|+++.|. +++++.|.. |++++|+++...+.. ....+ +......++.+.. ...+|..|-.||.+.
T Consensus 555 evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~---~~~~L-~~~~~p~si~l~~~~~~~~L~igl~dG~l~ 630 (1158)
T 3ei3_A 555 EVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL---HKEML-GGEIIPRSILMTTFESSHYLLCALGDGALF 630 (1158)
T ss_dssp CEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEE---EEEEC-CSSCCEEEEEEEEETTEEEEEEEETTSEEE
T ss_pred ceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeE---EEEEC-CCCCCCcEEEEEEeCCCcEEEEEeCCCeEE
Confidence 6889998863 368999996 999999999764321 11111 1122344444432 335788999999876
Q ss_pred EEecC--CCCceE---EeccCCCcEEEEEecCCCC-EEEEeeCCCeEEEEeCCCCCce-eEEecC-C-eEEEEecC--CC
Q 039044 73 MWPLL--SGGQPV---TVAMHDAPIKEVAWIPEMN-LLATGSWDKTLKYWDTRQPNPV-HTQQLP-D-RCYALTVR--YP 141 (194)
Q Consensus 73 ~~d~~--~~~~~~---~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~vwd~~~~~~~-~~~~~~-~-~~~~~~~~--~~ 141 (194)
-+.+. ++.... .+.+ ..++.=..+...+. -++.++ +....++--+ ++.. ...... . ....|+.. .+
T Consensus 631 ~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~-~~l~~s~l~~~~v~~~~~F~se~~~~ 707 (1158)
T 3ei3_A 631 YFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSN-HKLVFSNVNLKEVNYMCPLNSDGYPD 707 (1158)
T ss_dssp EEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESS-SSEEEEEBSSSCCCEEEEECCSSSTT
T ss_pred EEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcC-CceEEeccChHHhceEeccCcccCCC
Confidence 66554 333321 1222 33444333433333 333333 4444444333 2221 111111 1 23334332 24
Q ss_pred EEEEEcCCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEE
Q 039044 142 LMVVGTADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCI 191 (194)
Q Consensus 142 ~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~ 191 (194)
-++..+ ++.++|..+...+. .....-+....++.++++|+.+.++++.
T Consensus 708 g~v~~~-~~~LrI~~i~~~~~-~~~~~ipL~~Tprri~y~~~~~~~~v~~ 755 (1158)
T 3ei3_A 708 SLALAN-NSTLTIGTIDEIQK-LHIRTVPLYESPRKICYQEVSQCFGVLS 755 (1158)
T ss_dssp EEEEEC-SSCEEEEEECCSSS-EEEEEEECSSEEEEEEEEGGGTEEEEEE
T ss_pred cEEEEc-CCceEEEEecccCC-eeEEEEeCCCCceEEEEcCCCCEEEEEE
Confidence 455555 45599998865442 2333334567899999999888766543
No 341
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.30 E-value=0.057 Score=38.02 Aligned_cols=140 Identities=14% Similarity=0.123 Sum_probs=76.5
Q ss_pred CEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEE--ec-CCCeEEEe-cCCCeEEEEecCCCCceEEecc-
Q 039044 13 NILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTW--KD-DGTTVFSG-GCDKQVKMWPLLSGGQPVTVAM- 87 (194)
Q Consensus 13 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~-~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~- 87 (194)
..++.++.||.|.-+|..+++..-..... ...++....- .+ ++..++.. ..||.+..++..+|.....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~----~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE----NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG----GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC----ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc
Confidence 47888899999999888776431110000 0011111100 01 22333333 6899999999887754433321
Q ss_pred ---CCCcEEE---EEe-c----CCCCEEEEeeCCCeEEEEeCCCCCceeEEecCCe----------EEEEe-----cCCC
Q 039044 88 ---HDAPIKE---VAW-I----PEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDR----------CYALT-----VRYP 141 (194)
Q Consensus 88 ---~~~~v~~---~~~-~----~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~----------~~~~~-----~~~~ 141 (194)
...++.. ... . ..+..+++++.++.+.-.|+++++.+.++..... |.... ..+.
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~ 166 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECEN 166 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CC
T ss_pred cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCC
Confidence 1122221 000 0 0345788999999999999999999888765421 11111 1235
Q ss_pred EEEEEcCCCcEEEEE
Q 039044 142 LMVVGTADRNLVVFN 156 (194)
Q Consensus 142 ~l~~~~~dg~v~~~d 156 (194)
.++.+..+..+.+.+
T Consensus 167 ~v~ig~~~y~v~~~~ 181 (339)
T 2be1_A 167 MIVIGKTIFELGIHS 181 (339)
T ss_dssp EEEEEEEEEECEECC
T ss_pred eEEEecceEEEEEEC
Confidence 677777666666655
No 342
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.06 E-value=0.2 Score=42.19 Aligned_cols=118 Identities=14% Similarity=0.154 Sum_probs=79.8
Q ss_pred CCCeEEEEecCCCCceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecCCeEEEEec-CCCEEEE
Q 039044 67 CDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTV-RYPLMVV 145 (194)
Q Consensus 67 ~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 145 (194)
....|.|.|+..+..+.+ .+-..-+.-.+|..+.++.-. ..++.|+|+.+.+.++.+..+...+-|.| +.+.|+.
T Consensus 46 ~~~~vvIidl~~~~~~~r---rpi~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~l 121 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIR---RPISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVAL 121 (1630)
T ss_pred CCceEEEEECCCCCCccc---ccccchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEE
Confidence 344788999888765422 112223455688777766654 78999999999999999888777777777 4455655
Q ss_pred EcCCCcEEEEECCCCCeeeEEee---CCCcceeeEEEEecCCCeeEE
Q 039044 146 GTADRNLVVFNLQNPQTEFKRIN---SPLKYQTRCVAAFPDQQGFLV 189 (194)
Q Consensus 146 ~~~dg~v~~~d~~~~~~~~~~~~---~~~~~~v~~i~~~p~~~~l~~ 189 (194)
.+ +..|+-|++.....|.+... .-...+|..-..+++.++++.
T Consensus 122 VT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l 167 (1630)
T 1xi4_A 122 VT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLL 167 (1630)
T ss_pred Ec-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEE
Confidence 55 45699999976443332221 112467778888888888764
No 343
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.75 E-value=0.64 Score=32.03 Aligned_cols=140 Identities=9% Similarity=0.061 Sum_probs=68.4
Q ss_pred EEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecC----CC-------eEEEEecCCCCce
Q 039044 14 ILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGC----DK-------QVKMWPLLSGGQP 82 (194)
Q Consensus 14 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----d~-------~i~~~d~~~~~~~ 82 (194)
+++.|+. .+..||..+..-.. .................++..++.|+. ++ .+..||..+.+-.
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~----~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~ 91 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYL----TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWV 91 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEE----EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEE
T ss_pred hhhcccc--ceEEECCCCCceec----ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEE
Confidence 4555553 47888887664211 111111111122223346777777773 12 1677887654321
Q ss_pred E--EeccCCCcEEEEEecCCCCEEEEeeCC-------CeEEEEeCCCCCceeEEecCCe---EEEEecCCCEEEEEcC--
Q 039044 83 V--TVAMHDAPIKEVAWIPEMNLLATGSWD-------KTLKYWDTRQPNPVHTQQLPDR---CYALTVRYPLMVVGTA-- 148 (194)
Q Consensus 83 ~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~v~vwd~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~-- 148 (194)
. .+......-..+.+ ++.+++.|+.+ ..+.+||+.+.+....-..+.. ..+...++..++.|+.
T Consensus 92 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 169 (318)
T 2woz_A 92 GLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTD 169 (318)
T ss_dssp ECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEES
T ss_pred ECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCC
Confidence 1 11111111112222 56777777754 3578889887654332222211 1122246666666654
Q ss_pred ----CCcEEEEECCCCC
Q 039044 149 ----DRNLVVFNLQNPQ 161 (194)
Q Consensus 149 ----dg~v~~~d~~~~~ 161 (194)
-..+.+||+.+.+
T Consensus 170 ~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 170 DKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp SSCBCCCEEEEETTTTE
T ss_pred CCCccceEEEEcCCCCE
Confidence 2358999998764
No 344
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.33 E-value=1.4 Score=34.27 Aligned_cols=151 Identities=8% Similarity=0.131 Sum_probs=78.5
Q ss_pred CCCCEEEEeeCC----CeEEEEecccCCccccccc--ccccCCCCCeeEEEEec-CCCeEEEecCCC------eEEEEec
Q 039044 10 PKANILVATSWD----NQVRCWEISRGGTGVASVP--KASISHDHPVLCSTWKD-DGTTVFSGGCDK------QVKMWPL 76 (194)
Q Consensus 10 p~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~------~i~~~d~ 76 (194)
.++.+++.|+.+ ..+.+||..+..-...... .........-.+++..+ +++.++.|+.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 355677777753 3577788766532111100 00011111223344443 677777776543 4778887
Q ss_pred CCCCceE--EeccCCCcEEEEEecCCCCEEEEeeCCC--eEEEEeCCCCCceeEEe---c-----CCeEEEEecC-CCEE
Q 039044 77 LSGGQPV--TVAMHDAPIKEVAWIPEMNLLATGSWDK--TLKYWDTRQPNPVHTQQ---L-----PDRCYALTVR-YPLM 143 (194)
Q Consensus 77 ~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~v~vwd~~~~~~~~~~~---~-----~~~~~~~~~~-~~~l 143 (194)
.+.+-.. .+.. ...-.+++...++.+++.|+.++ .+.+||..+.+...... . ....+.+... +..+
T Consensus 476 ~t~~W~~~~~~p~-~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSH-TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSB-CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCC-CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 7643211 1111 11112233323778888887654 68999998765432211 1 1123455555 5667
Q ss_pred EEEcC--C-----CcEEEEECCCCC
Q 039044 144 VVGTA--D-----RNLVVFNLQNPQ 161 (194)
Q Consensus 144 ~~~~~--d-----g~v~~~d~~~~~ 161 (194)
+.|+. + ..+.+||+.+..
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EECCcCCCCCeeeCcEEEEEccCCc
Confidence 77765 2 358899998765
No 345
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=93.27 E-value=1.5 Score=35.56 Aligned_cols=38 Identities=26% Similarity=0.263 Sum_probs=32.5
Q ss_pred cEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEe
Q 039044 91 PIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ 128 (194)
Q Consensus 91 ~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~ 128 (194)
.+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46777888888899999999999999999998876654
No 346
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.08 E-value=3.8 Score=35.07 Aligned_cols=145 Identities=12% Similarity=0.160 Sum_probs=82.1
Q ss_pred EEEEeeCCCeEEEEecccCCcccccccccccCC----CCCeeEEEEecCCCeEEEec-------CCCeEEEEecCCCCce
Q 039044 14 ILVATSWDNQVRCWEISRGGTGVASVPKASISH----DHPVLCSTWKDDGTTVFSGG-------CDKQVKMWPLLSGGQP 82 (194)
Q Consensus 14 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~-------~d~~i~~~d~~~~~~~ 82 (194)
.|+..+ +..|.-|++..... +...+..| ...|..-..+++.++++..+ -.|.+.+|..+.+. .
T Consensus 118 ~l~lVT-~~aVyHW~~~~~s~----P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-s 191 (1630)
T 1xi4_A 118 TVALVT-DNAVYHWSMEGESQ----PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-S 191 (1630)
T ss_pred eeEEEc-CCeEEEeccCCCCc----cHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-c
Confidence 344333 34678888754321 12222222 45677777788888766332 34788999876543 3
Q ss_pred EEeccCCCcEEEEEec--C-CCCEEEEeeC---CCeEEEEeCCCC---Cc-e--e--EEecC-------CeEEEEecCCC
Q 039044 83 VTVAMHDAPIKEVAWI--P-EMNLLATGSW---DKTLKYWDTRQP---NP-V--H--TQQLP-------DRCYALTVRYP 141 (194)
Q Consensus 83 ~~~~~~~~~v~~~~~~--~-~~~~l~~~~~---d~~v~vwd~~~~---~~-~--~--~~~~~-------~~~~~~~~~~~ 141 (194)
+.+.+|-.....+... + ....++.+.. .+.++|.++... .+ . + .+..+ ...+.+++...
T Consensus 192 Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g 271 (1630)
T 1xi4_A 192 QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD 271 (1630)
T ss_pred hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC
Confidence 3455554443333332 1 1223333322 268999988543 11 1 0 11111 13566777777
Q ss_pred EEEEEcCCCcEEEEECCCCCeee
Q 039044 142 LMVVGTADRNLVVFNLQNPQTEF 164 (194)
Q Consensus 142 ~l~~~~~dg~v~~~d~~~~~~~~ 164 (194)
.++..+..|.+++||+.++...+
T Consensus 272 ~iy~itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 272 VVFLITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred EEEEEecCceEEEEecccchhhh
Confidence 88899999999999999987543
No 347
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=92.66 E-value=1.8 Score=30.27 Aligned_cols=144 Identities=10% Similarity=0.021 Sum_probs=70.5
Q ss_pred CCCEEEEeeCC-CeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecC-C---------CeEEEEecCCC
Q 039044 11 KANILVATSWD-NQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGC-D---------KQVKMWPLLSG 79 (194)
Q Consensus 11 ~~~~l~~~~~d-~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d---------~~i~~~d~~~~ 79 (194)
++.+++.|+.+ ..+.+||....... .............-.+++.. +++.++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~-W~~~~~~p~~~R~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKK-WTALAAFPGGPRDQATSAFI-DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCC-EEECCCCTTCCCBSCEEEEE-TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCC-eeECCCCCCCcCccceEEEE-CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 56666666643 46778887642110 11111111011111122222 5667777765 2 45888998765
Q ss_pred CceE--EeccCCCcEEEEEecCCCCEEEEeeCC---------------------------------------CeEEEEeC
Q 039044 80 GQPV--TVAMHDAPIKEVAWIPEMNLLATGSWD---------------------------------------KTLKYWDT 118 (194)
Q Consensus 80 ~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------------------~~v~vwd~ 118 (194)
+-.. .+......-.+++. .++++++.|+.+ ..+.+||+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 175 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDP 175 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEET
T ss_pred cEEECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeC
Confidence 3221 11101111111222 467777778754 57899999
Q ss_pred CCCCceeEEecC--Ce--EEEEecCCCEEEEEcC------CCcEEEEEC
Q 039044 119 RQPNPVHTQQLP--DR--CYALTVRYPLMVVGTA------DRNLVVFNL 157 (194)
Q Consensus 119 ~~~~~~~~~~~~--~~--~~~~~~~~~~l~~~~~------dg~v~~~d~ 157 (194)
.+.+....-..+ .. ..+...+++.++.|+. ...+..||+
T Consensus 176 ~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 176 STQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp TTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred CCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 876644332222 11 2222335666666654 235777887
No 348
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.31 E-value=4.3 Score=33.81 Aligned_cols=109 Identities=14% Similarity=0.183 Sum_probs=70.2
Q ss_pred CCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCceE-EeccCCCcEEEEEecCC------CCEEEEeeC-CCeEEEEeC
Q 039044 47 DHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPV-TVAMHDAPIKEVAWIPE------MNLLATGSW-DKTLKYWDT 118 (194)
Q Consensus 47 ~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~-~~~~~~~~v~~~~~~~~------~~~l~~~~~-d~~v~vwd~ 118 (194)
...|...+.+. .+++.+. ++.+.++++..++... .-..-...|.|+++.|. +++++.|.. |++++|+++
T Consensus 513 ~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL 589 (1158)
T 3ei3_A 513 AKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKL 589 (1158)
T ss_dssp CCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEET
T ss_pred CCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEEC
Confidence 34566666543 4566554 6788888877653221 11223568999999863 468888986 999999999
Q ss_pred CCCCceeEEecC----CeEEEEec--CCCEEEEEcCCCcEEEEECC
Q 039044 119 RQPNPVHTQQLP----DRCYALTV--RYPLMVVGTADRNLVVFNLQ 158 (194)
Q Consensus 119 ~~~~~~~~~~~~----~~~~~~~~--~~~~l~~~~~dg~v~~~d~~ 158 (194)
...+.+.....+ .+.+.+.. ...++..|-.||.+.-+.+.
T Consensus 590 ~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 590 PSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp TTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred CCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 877766554442 23333332 34578899999987655543
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.65 E-value=3.1 Score=30.73 Aligned_cols=100 Identities=9% Similarity=0.019 Sum_probs=57.7
Q ss_pred CeeEEEEecCCC-eEEEecCCCeEEEEecCCC---CceEEec---------cCCCcEEEEEecCC----CCEEEEeeC--
Q 039044 49 PVLCSTWKDDGT-TVFSGGCDKQVKMWPLLSG---GQPVTVA---------MHDAPIKEVAWIPE----MNLLATGSW-- 109 (194)
Q Consensus 49 ~i~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~---~~~~~~~---------~~~~~v~~~~~~~~----~~~l~~~~~-- 109 (194)
....|+|.|++. .++.+...|.|++++.... ..+..+. ........|+|+|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 456899999996 5666678899999975432 1222221 11456789999996 444433322
Q ss_pred C----------CeEEEEeCCCC----------CceeEEe-----cCCeEEEEecCCCEEEEEcC
Q 039044 110 D----------KTLKYWDTRQP----------NPVHTQQ-----LPDRCYALTVRYPLMVVGTA 148 (194)
Q Consensus 110 d----------~~v~vwd~~~~----------~~~~~~~-----~~~~~~~~~~~~~~l~~~~~ 148 (194)
+ ..|.-|.+... +.+.... +....+.|.|++.+.++.+.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 13444655421 1222222 12257899999986666554
No 350
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.44 E-value=1.2 Score=36.11 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=28.1
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGT 34 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~ 34 (194)
.|.+++..++..++++-+.|+++|+|++.++..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCe
Confidence 456778888889999999999999999988753
No 351
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.57 E-value=5.2 Score=31.38 Aligned_cols=172 Identities=10% Similarity=0.072 Sum_probs=94.8
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.|.++....++ .|..|+.+| +..||..+..- ..........|.++.. .++. |-.++.+ .+..||..+++.
T Consensus 64 ~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f-----~~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~~~~ 133 (758)
T 3ott_A 64 RIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRY-----EQPETDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQSRKL 133 (758)
T ss_dssp CEEEEEEETTT-EEEEEETTE-EEEEETTTTEE-----CCCSCCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTTCCE
T ss_pred eEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEE-----ECcccCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCCCeE
Confidence 36677666655 455666555 77888765421 1111112234666654 3554 4455555 588899766443
Q ss_pred eEEec-----cCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecC---------CeEEEEecCCCEEEEEc
Q 039044 82 PVTVA-----MHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLP---------DRCYALTVRYPLMVVGT 147 (194)
Q Consensus 82 ~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~ 147 (194)
..+. .....|.++...+++.+.+ ++. +-|..+|..+.+.. ....+ ..++....++..|..|+
T Consensus 134 -~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt 209 (758)
T 3ott_A 134 -TSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTY-NGLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT 209 (758)
T ss_dssp -EEECHHHHCCSCSCEEEEEECTTCCEEE-EET-TEEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEE
T ss_pred -EEeccCCCCcCCCeEEEEEEcCCCCEEE-EeC-CCHhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEE
Confidence 3331 1234688888877777554 443 45778887654422 11111 23444555566566666
Q ss_pred CCCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEE
Q 039044 148 ADRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVC 190 (194)
Q Consensus 148 ~dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~ 190 (194)
.. -+..+|..+.+. ..........|.++...++|...+..
T Consensus 210 ~~-Gl~~~~~~~~~~--~~~~~l~~~~i~~i~~d~~g~lWigT 249 (758)
T 3ott_A 210 EG-YLFQYFPSTGQI--KQTEAFHNNSIKSLALDGNGDLLAGT 249 (758)
T ss_dssp EE-EEEEEETTTTEE--EEEEEEEEEEEEEEEECTTCCEEEEE
T ss_pred CC-CCeEEcCCCCeE--EeccCCCCCeEEEEEEcCCCCEEEEe
Confidence 43 488899876542 11111123457888877777766543
No 352
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=89.64 E-value=6.3 Score=30.92 Aligned_cols=180 Identities=17% Similarity=0.091 Sum_probs=88.9
Q ss_pred CeeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc
Q 039044 2 SVSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ 81 (194)
Q Consensus 2 ~v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 81 (194)
.|.++...+++.+.+ |+.+| +..++.....................|.++...+++..|-.|+. +.+..++..+++.
T Consensus 147 ~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~ 223 (758)
T 3ott_A 147 TIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQI 223 (758)
T ss_dssp CEEEEEECTTCCEEE-EETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEE
T ss_pred eEEEEEEcCCCCEEE-EeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeE
Confidence 356677776666554 44444 66677554321000000000011234788888877665555554 4588888766543
Q ss_pred eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEe-------cC---CeEEEEecCCCEEEEEcCCCc
Q 039044 82 PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ-------LP---DRCYALTVRYPLMVVGTADRN 151 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~-------~~---~~~~~~~~~~~~l~~~~~dg~ 151 (194)
..........|.++...++|.+.+ ++ ++-+.+++..+.+...-.. .+ +.++....++. |-.|+..|
T Consensus 224 ~~~~~l~~~~i~~i~~d~~g~lWi-gT-~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWiGT~~G- 299 (758)
T 3ott_A 224 KQTEAFHNNSIKSLALDGNGDLLA-GT-DNGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN-IWLGTDYG- 299 (758)
T ss_dssp EEEEEEEEEEEEEEEECTTCCEEE-EE-TTEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC-EEEEESSS-
T ss_pred EeccCCCCCeEEEEEEcCCCCEEE-Ee-CCceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC-EEEEeCCc-
Confidence 211111234588888877776554 44 4568888877654322111 01 12333344443 55566666
Q ss_pred EEEEECCCCCeeeEEe----eCCCcceeeEEEEecCCCeeEE
Q 039044 152 LVVFNLQNPQTEFKRI----NSPLKYQTRCVAAFPDQQGFLV 189 (194)
Q Consensus 152 v~~~d~~~~~~~~~~~----~~~~~~~v~~i~~~p~~~~l~~ 189 (194)
+.++....... .... .......|.++.-.++|...+.
T Consensus 300 l~~~~~~~~~~-~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG 340 (758)
T 3ott_A 300 ISLSRYNSALQ-FIPISQITGTGDGNQFYSLFRDSKGFYWFG 340 (758)
T ss_dssp EEEECCCC-CE-EEEHHHHSCSCCCCBEEEEEECTTCCEEEE
T ss_pred ccccccCCcee-EEecccCCCCCCCceEEEEEEcCCCCEEEe
Confidence 55543322111 1110 0112235677776666665443
No 353
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=89.45 E-value=1.8 Score=35.93 Aligned_cols=37 Identities=11% Similarity=0.085 Sum_probs=31.3
Q ss_pred CeeEEEEecCCCeEEEecCCCeEEEEecCCCCceEEe
Q 039044 49 PVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTV 85 (194)
Q Consensus 49 ~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 85 (194)
.+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4566677788889999999999999999999887664
No 354
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=89.40 E-value=3.4 Score=31.57 Aligned_cols=59 Identities=14% Similarity=0.220 Sum_probs=39.7
Q ss_pred EEEEecCCCEEEEEcCC------------CcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 133 CYALTVRYPLMVVGTAD------------RNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 133 ~~~~~~~~~~l~~~~~d------------g~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
.+.|++.|..++.-..+ ..+.+.+..+++. ......+....++.+.|+||++.|.+.++
T Consensus 480 NL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~-~rf~~~P~gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred ceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeE-EEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence 57899999855543322 2345555555542 33344556788999999999999988765
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=89.04 E-value=1.4 Score=36.49 Aligned_cols=38 Identities=26% Similarity=0.263 Sum_probs=30.6
Q ss_pred cEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEe
Q 039044 91 PIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQ 128 (194)
Q Consensus 91 ~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~ 128 (194)
.+.+++..++..++++-+.|+++++|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34455666778899999999999999999998776644
No 356
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=87.43 E-value=5.2 Score=27.24 Aligned_cols=127 Identities=13% Similarity=0.078 Sum_probs=64.3
Q ss_pred CCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCceEEeccCCCcEEEEEecCC
Q 039044 21 DNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPIKEVAWIPE 100 (194)
Q Consensus 21 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~ 100 (194)
||.|..|-.+..... ..+... ...|..++...+ ..+.-. +|.|..|-......+-.-......|..++.-..
T Consensus 80 ~G~v~~wG~n~~Gql--g~P~~~---~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~ 151 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQT--TVPAEA---RSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY 151 (282)
T ss_dssp TTEEEEEECCTTSTT--CCCGGG---SSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS
T ss_pred CCEEEEeeCCCCCCC--CCCccc---CCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC
Confidence 788888866543321 111111 235666665543 333334 889999976543322111122345777766443
Q ss_pred CCEEEEeeCCCeEEEEeCCCCCce-eEEecCCeEEEEecCCCEEEEEcCCCcEEEEECCC
Q 039044 101 MNLLATGSWDKTLKYWDTRQPNPV-HTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQN 159 (194)
Q Consensus 101 ~~~l~~~~~d~~v~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~ 159 (194)
+.+.-. ||.|..|-......+ ...........++......+.- .+|.|+.|-...
T Consensus 152 --~~~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs~al-~~G~v~~wG~n~ 207 (282)
T 3qhy_B 152 --TALAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHSLAL-KDGKVIAWGDNR 207 (282)
T ss_dssp --EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEE-ETTEEEEEECCT
T ss_pred --EEEEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEEEEE-ECCeEEEEECCC
Confidence 222233 788998866542222 1111122344444444444444 588888886544
No 357
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=86.97 E-value=6.4 Score=30.05 Aligned_cols=59 Identities=12% Similarity=0.206 Sum_probs=38.7
Q ss_pred EEEEecCCCEEEEEcC------------CCcEEEEECCCCCeeeEEeeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 133 CYALTVRYPLMVVGTA------------DRNLVVFNLQNPQTEFKRINSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 133 ~~~~~~~~~~l~~~~~------------dg~v~~~d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
.+.|+++|.+.+.-.. ...+..++..+++. ......+....++.++|+||++.|.++.+
T Consensus 480 nL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel-~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred ceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeE-EEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 6788888876663221 12466666665553 22233334567899999999999998875
No 358
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=85.86 E-value=6 Score=30.30 Aligned_cols=58 Identities=12% Similarity=0.075 Sum_probs=39.8
Q ss_pred eeEEEEecCCCeEEEecCC------------CeEEEEecCCCCceEEecc-CCCcEEEEEecCCCCEEEEe
Q 039044 50 VLCSTWKDDGTTVFSGGCD------------KQVKMWPLLSGGQPVTVAM-HDAPIKEVAWIPEMNLLATG 107 (194)
Q Consensus 50 i~~~~~~~~~~~l~~~~~d------------~~i~~~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~ 107 (194)
.-.|+|+|.|++++.-..+ +.+.+.+..+++..+.+.. ...+++.++|+|+++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4568999999877665432 2455566666665554443 34689999999999887765
No 359
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=85.82 E-value=7.6 Score=27.62 Aligned_cols=105 Identities=10% Similarity=-0.022 Sum_probs=53.2
Q ss_pred CeeEEEEec-C-CCeEEEecCCCeEEEEecCCCCceEEecc-------------------CCCcEEEEEecCC-CCEEEE
Q 039044 49 PVLCSTWKD-D-GTTVFSGGCDKQVKMWPLLSGGQPVTVAM-------------------HDAPIKEVAWIPE-MNLLAT 106 (194)
Q Consensus 49 ~i~~~~~~~-~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-------------------~~~~v~~~~~~~~-~~~l~~ 106 (194)
.|.++++.| + ...+..+...+.|...+ ..++.-..+.. ....+.+|.+.|. ...+..
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~v 194 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYI 194 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEE
Confidence 577888987 2 56677766666555443 22332222210 1235788999873 344444
Q ss_pred eeCCCeEEEEeCCCCCceeEEe----------------cCCeEEEEecC-CCEEEEEcCCCcEEEEE
Q 039044 107 GSWDKTLKYWDTRQPNPVHTQQ----------------LPDRCYALTVR-YPLMVVGTADRNLVVFN 156 (194)
Q Consensus 107 ~~~d~~v~vwd~~~~~~~~~~~----------------~~~~~~~~~~~-~~~l~~~~~dg~v~~~d 156 (194)
+..++.|...+-. ++.-.... .....+.+.|. ...++.+...+ |...+
T Consensus 195 g~~~ggl~~s~Dg-G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~ 259 (394)
T 3b7f_A 195 GMSSGGVFESTDA-GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD 259 (394)
T ss_dssp EEETBEEEEESST-TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE
T ss_pred EECCCCEEEECCC-CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC
Confidence 5444544443211 22111111 11346677775 35677776555 44443
No 360
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=84.60 E-value=7.5 Score=26.45 Aligned_cols=142 Identities=13% Similarity=0.069 Sum_probs=73.0
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCCCce
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQP 82 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 82 (194)
|..++.... ..++. . ||.|..|-.+.....- .+.. ....|..++..... .++. . ||.|..|-......+
T Consensus 26 i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg--~p~~---~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gql 94 (282)
T 3qhy_B 26 VDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLT--MPAA---TQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQT 94 (282)
T ss_dssp CCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTS--CCGG---GGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTT
T ss_pred CcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCC--CCcc---CCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCC
Confidence 445554432 22333 4 8999999766543211 1111 12346666654332 2333 4 899999986543322
Q ss_pred EEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCce-eEEecCCeEEEEecCCCEEEEEcCCCcEEEEECCC
Q 039044 83 VTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPV-HTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQN 159 (194)
Q Consensus 83 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~~ 159 (194)
-.-..-...|..++.... +.+.-. ||.|..|-......+ ...........++......+.-. ||.|+.|-...
T Consensus 95 g~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n~ 168 (282)
T 3qhy_B 95 TVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAVK-NGGVIAWGDNY 168 (282)
T ss_dssp CCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEEE-TTEEEEEECCT
T ss_pred CCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEEE-CCEEEEecCCC
Confidence 111111346777777554 333344 999999976543222 11112223444444444444444 78888887654
No 361
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=84.55 E-value=11 Score=28.75 Aligned_cols=61 Identities=10% Similarity=0.057 Sum_probs=41.1
Q ss_pred CCeeEEEEecCCCeEEEecC------------CCeEEEEecCCCCceEEecc-CCCcEEEEEecCCCCEEEEee
Q 039044 48 HPVLCSTWKDDGTTVFSGGC------------DKQVKMWPLLSGGQPVTVAM-HDAPIKEVAWIPEMNLLATGS 108 (194)
Q Consensus 48 ~~i~~~~~~~~~~~l~~~~~------------d~~i~~~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~ 108 (194)
.....|.|.++|.+.+.... ...+..++..+++....+.. ....++.++|+||++.|++.-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 34567999999987774322 12566667666665544443 246789999999998877653
No 362
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=81.55 E-value=10 Score=25.78 Aligned_cols=148 Identities=10% Similarity=0.030 Sum_probs=85.8
Q ss_pred CCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCC---------CCc
Q 039044 11 KANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLS---------GGQ 81 (194)
Q Consensus 11 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~---------~~~ 81 (194)
+...++..+.+|.++-..+..-...............+.+..+........++..+.+|.+..++... |..
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~ 158 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQ 158 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEE
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEE
Confidence 46789999999999999876642100000111112345566665555666788888899988887532 111
Q ss_pred eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCC-------CceeEEecCCeEEE--EecCCCEEEEEcCCCcE
Q 039044 82 PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP-------NPVHTQQLPDRCYA--LTVRYPLMVVGTADRNL 152 (194)
Q Consensus 82 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~-------~~~~~~~~~~~~~~--~~~~~~~l~~~~~dg~v 152 (194)
...+.. ...|..+...+++..++..+..|.++...+..- +-+..+......+. .......++..+.+|.+
T Consensus 159 ~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~~ 237 (276)
T 3no0_A 159 GIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGKA 237 (276)
T ss_dssp CCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSCE
T ss_pred EEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCeE
Confidence 112332 355666655556678888899999888875321 11222222222221 22234567777888887
Q ss_pred EE--EECCC
Q 039044 153 VV--FNLQN 159 (194)
Q Consensus 153 ~~--~d~~~ 159 (194)
.. ++...
T Consensus 238 ir~~~~~~~ 246 (276)
T 3no0_A 238 FYDKINQKD 246 (276)
T ss_dssp EEEEEEGGG
T ss_pred EEeeeCHHH
Confidence 77 77654
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=79.55 E-value=4.6 Score=31.67 Aligned_cols=37 Identities=16% Similarity=0.184 Sum_probs=28.9
Q ss_pred cEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEec
Q 039044 91 PIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQL 129 (194)
Q Consensus 91 ~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~ 129 (194)
.|.++.+ +..++++-+.|.++|+|++++++++.+...
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3554444 467999999999999999999987766544
No 364
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=75.54 E-value=4.5 Score=31.74 Aligned_cols=35 Identities=14% Similarity=0.187 Sum_probs=27.5
Q ss_pred eeEEEEecCCCeEEEecCCCeEEEEecCCCCceEEec
Q 039044 50 VLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVA 86 (194)
Q Consensus 50 i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 86 (194)
|.++.+ +..++++-+.|.++|+|++++++++....
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 444433 57799999999999999999998776543
No 365
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=75.50 E-value=8.7 Score=29.05 Aligned_cols=70 Identities=7% Similarity=0.063 Sum_probs=41.9
Q ss_pred eeEEEcC--CCCEEEEeeCCCeEEEEecccCCcc-cccccccccCCCCCee-EEEEecCCCeEEEecCCCeEEE
Q 039044 4 SSLCFSP--KANILVATSWDNQVRCWEISRGGTG-VASVPKASISHDHPVL-CSTWKDDGTTVFSGGCDKQVKM 73 (194)
Q Consensus 4 ~~~~~~p--~~~~l~~~~~d~~i~i~~~~~~~~~-~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~d~~i~~ 73 (194)
++|+... +-..+..|+.+|.|.-..+...... .............+|. .|.++++..+|+.++.++.++|
T Consensus 403 T~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 403 TSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 3444443 2356788999998776555433211 0011112223356775 8999999999999987765554
No 366
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=73.88 E-value=22 Score=25.55 Aligned_cols=170 Identities=6% Similarity=-0.057 Sum_probs=94.3
Q ss_pred eEEEEecccC--Ccc-cccccccccCCCCCeeEEEEe---cC----CCeEEEec-CCCeEEEEecCCCCceEEec----c
Q 039044 23 QVRCWEISRG--GTG-VASVPKASISHDHPVLCSTWK---DD----GTTVFSGG-CDKQVKMWPLLSGGQPVTVA----M 87 (194)
Q Consensus 23 ~i~i~~~~~~--~~~-~~~~~~~~~~~~~~i~~~~~~---~~----~~~l~~~~-~d~~i~~~d~~~~~~~~~~~----~ 87 (194)
+|.+||+.+. +.. ....+.........+..+.+. |+ +.+++.+. ..+.|.++|+.+++.-+.+. .
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5778888877 421 111122222334568888887 22 33444443 46789999998876544331 0
Q ss_pred C--------------CCcEEEEEecCC----CCEEEEeeCCC-eEEEEe---CCCCC---ceeEE--ecC-Ce--EEEEe
Q 039044 88 H--------------DAPIKEVAWIPE----MNLLATGSWDK-TLKYWD---TRQPN---PVHTQ--QLP-DR--CYALT 137 (194)
Q Consensus 88 ~--------------~~~v~~~~~~~~----~~~l~~~~~d~-~v~vwd---~~~~~---~~~~~--~~~-~~--~~~~~ 137 (194)
. ...+..|+.+|+ ++.|......+ .+.-.. ++... .++.+ +.+ .. ..+++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D 283 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYD 283 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEEC
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEe
Confidence 0 236788889887 67776665444 333222 22221 12222 111 22 34565
Q ss_pred -cCCCEEEEEcCCCcEEEEECCC-CC--eeeEE-eeCCCcceeeEEEEecCCCeeEEEEe
Q 039044 138 -VRYPLMVVGTADRNLVVFNLQN-PQ--TEFKR-INSPLKYQTRCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 138 -~~~~~l~~~~~dg~v~~~d~~~-~~--~~~~~-~~~~~~~~v~~i~~~p~~~~l~~~~~ 192 (194)
.+|..+++--+...|..|+..+ .- ..... ...+.-..+..+++.++|...+.+.+
T Consensus 284 ~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 284 PKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp TTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred CCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 5676777777788899999876 21 11111 12222335678888888877776643
No 367
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=72.96 E-value=17 Score=27.15 Aligned_cols=61 Identities=5% Similarity=-0.030 Sum_probs=36.9
Q ss_pred CEEEEeeCCCeEEEEecccCCcc---ccccc--ccccCCCCCeeEEEEecCCCeEEEecCCCeEEE
Q 039044 13 NILVATSWDNQVRCWEISRGGTG---VASVP--KASISHDHPVLCSTWKDDGTTVFSGGCDKQVKM 73 (194)
Q Consensus 13 ~~l~~~~~d~~i~i~~~~~~~~~---~~~~~--~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~ 73 (194)
..+..|+.+|.|.-.-+...... ..... ........+|..|.++++..+|+.++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 46778899998754433221100 00011 112224578999999999999999998876654
No 368
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=70.40 E-value=25 Score=24.62 Aligned_cols=147 Identities=11% Similarity=0.015 Sum_probs=86.8
Q ss_pred CCCEEEEeeCCCeEEEEecccCCcccc--cccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecC--CCC------
Q 039044 11 KANILVATSWDNQVRCWEISRGGTGVA--SVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLL--SGG------ 80 (194)
Q Consensus 11 ~~~~l~~~~~d~~i~i~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~--~~~------ 80 (194)
+...++..+.+|.++--.+..-..... .....+. ..+.+..+........++..+..|.+..+... .-.
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lk-e~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a 186 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLR-DNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRAT 186 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCC-TTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTS
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEEC-CCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCC
Confidence 467899999999999988765322110 0111122 24556666555566678888889988888765 211
Q ss_pred ---ceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCC-------CceeEEec---CCe--EEEEecCCCEEEE
Q 039044 81 ---QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP-------NPVHTQQL---PDR--CYALTVRYPLMVV 145 (194)
Q Consensus 81 ---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~-------~~~~~~~~---~~~--~~~~~~~~~~l~~ 145 (194)
....+. ....|.++...+++.+++..+..|.++.-.+..- +-+..+.. ... .+........++.
T Consensus 187 ~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l 265 (327)
T 3uc1_A 187 SGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYA 265 (327)
T ss_dssp BCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEE
T ss_pred CCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEE
Confidence 111222 2455777766666678888999999988765321 11111221 111 2222334557777
Q ss_pred EcCCCcEEEEECCC
Q 039044 146 GTADRNLVVFNLQN 159 (194)
Q Consensus 146 ~~~dg~v~~~d~~~ 159 (194)
.+.+|.+.-++...
T Consensus 266 ~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 266 VTSGGGVIRTAARQ 279 (327)
T ss_dssp EEGGGCEEEEEGGG
T ss_pred EcCCCeEEEEehhh
Confidence 78888877776543
No 369
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=67.60 E-value=28 Score=24.12 Aligned_cols=153 Identities=7% Similarity=-0.025 Sum_probs=84.8
Q ss_pred EEEcCCCCEEEEeeCCCeEEEEecccCCcc------cccccccccCCCCCeeEEEEec---CCCeEEEecCCCeEEEEec
Q 039044 6 LCFSPKANILVATSWDNQVRCWEISRGGTG------VASVPKASISHDHPVLCSTWKD---DGTTVFSGGCDKQVKMWPL 76 (194)
Q Consensus 6 ~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~d~~i~~~d~ 76 (194)
+........++..+..|.++-+....-... ..............|..+...+ +..+++..+.+|.++...+
T Consensus 52 ~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l 131 (312)
T 1suu_A 52 ALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFES 131 (312)
T ss_dssp EEEEETTCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEG
T ss_pred EEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEH
Confidence 333334556777778888776665432110 0000011112334555554433 4567888899999998876
Q ss_pred CCC-------CceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCC----C---ceeE--EecCCeEEE--Eec
Q 039044 77 LSG-------GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQP----N---PVHT--QQLPDRCYA--LTV 138 (194)
Q Consensus 77 ~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~----~---~~~~--~~~~~~~~~--~~~ 138 (194)
..- .....+.. ...+-.+....+...++..+.+|.+..+....- . =+.. +......+. ...
T Consensus 132 ~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~ 210 (312)
T 1suu_A 132 TDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVK 210 (312)
T ss_dssp GGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECT
T ss_pred HHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEEC
Confidence 432 11222333 455656555555567778888999888876431 1 1111 112222233 223
Q ss_pred CCCEEEEEcCCCcEEEEECCC
Q 039044 139 RYPLMVVGTADRNLVVFNLQN 159 (194)
Q Consensus 139 ~~~~l~~~~~dg~v~~~d~~~ 159 (194)
++..+++.+..|.....++..
T Consensus 211 ~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 211 ENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp TCSEEEEEETTSEEEEEEGGG
T ss_pred CCCeEEEEECCCceEEEEHHH
Confidence 566788899999988888754
No 370
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=66.49 E-value=22 Score=26.82 Aligned_cols=61 Identities=11% Similarity=0.043 Sum_probs=37.9
Q ss_pred CEEEEeeCCCeEEEEecccCCcccccccccccCCCCCe-eEEEEecCCCeEEEecCCCeEEEE
Q 039044 13 NILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPV-LCSTWKDDGTTVFSGGCDKQVKMW 74 (194)
Q Consensus 13 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~d~~i~~~ 74 (194)
..+..|+.+|.|.-.-+.............. ....+| ..|.++++...|+.++.++.+++-
T Consensus 401 tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~vp 462 (528)
T 3ol2_B 401 TIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKVP 462 (528)
T ss_dssp EEEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSSEEEEECSSCEEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEEE
Confidence 5677889999887544432211100111112 445677 489999999999999888776653
No 371
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=66.34 E-value=30 Score=27.07 Aligned_cols=61 Identities=5% Similarity=0.038 Sum_probs=37.6
Q ss_pred CEEEEeeCCCeEE-EEecccCCcc----cccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEE
Q 039044 13 NILVATSWDNQVR-CWEISRGGTG----VASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKM 73 (194)
Q Consensus 13 ~~l~~~~~d~~i~-i~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~ 73 (194)
..+..|+.+|.|. +......... .............+|..|.++++.+.|+.++.++.++|
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4677889999875 3322221110 00011122345678999999999999999998886654
No 372
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=60.14 E-value=41 Score=25.85 Aligned_cols=62 Identities=3% Similarity=-0.035 Sum_probs=38.2
Q ss_pred CEEEEeeCCCeEEEEecccCC-cc-ccc-ccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEE
Q 039044 13 NILVATSWDNQVRCWEISRGG-TG-VAS-VPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMW 74 (194)
Q Consensus 13 ~~l~~~~~d~~i~i~~~~~~~-~~-~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~ 74 (194)
..+..|+.+|.|.-.-..... .. ... ..........+|..|.++++...|+.++.++.+++-
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 467788889987644332221 10 000 011112345689999999999999999888766654
No 373
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=56.23 E-value=61 Score=24.28 Aligned_cols=66 Identities=12% Similarity=-0.026 Sum_probs=37.0
Q ss_pred eeEEEEecC----CC--eEEEecCCCeEEEEec-CCC-------CceEEecc--CCCcEEEEEecCCCCEEEEeeCCCeE
Q 039044 50 VLCSTWKDD----GT--TVFSGGCDKQVKMWPL-LSG-------GQPVTVAM--HDAPIKEVAWIPEMNLLATGSWDKTL 113 (194)
Q Consensus 50 i~~~~~~~~----~~--~l~~~~~d~~i~~~d~-~~~-------~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~v 113 (194)
.+.|+...- ++ .++.|+.+|.|.-.-+ ..+ ..+.++.. ...+|..|.++++..+|..++.++.+
T Consensus 406 lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~ 485 (495)
T 1q47_A 406 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVA 485 (495)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEE
T ss_pred eEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEE
Confidence 456655431 32 4667777876643322 121 12233332 34678888888888888888766655
Q ss_pred EE
Q 039044 114 KY 115 (194)
Q Consensus 114 ~v 115 (194)
+|
T Consensus 486 ~v 487 (495)
T 1q47_A 486 QL 487 (495)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 374
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=55.20 E-value=53 Score=23.25 Aligned_cols=100 Identities=7% Similarity=-0.087 Sum_probs=49.2
Q ss_pred CEEEEeeCCCeEEEEecccCCcccccccccccCCCCCeeEEEEec-CCCeEEEecCCC----eEEEEecCCCCceEEecc
Q 039044 13 NILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVLCSTWKD-DGTTVFSGGCDK----QVKMWPLLSGGQPVTVAM 87 (194)
Q Consensus 13 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~----~i~~~d~~~~~~~~~~~~ 87 (194)
..|.+|+..| +.+++-...... .. ..........+.+|++.| +...+..+...| .|...+ ..++.-..+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~-W~-~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~ 98 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRT-WE-LRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATR 98 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCS-EE-EEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSB
T ss_pred CEEEEEecCc-eEEEECCCCCCC-ce-ECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCc
Confidence 4677788776 555554331110 01 110112345689999998 334455555554 344332 23332222211
Q ss_pred --------------CCCcEEEEEecC-C-CCEEEEeeCCCeEEEE
Q 039044 88 --------------HDAPIKEVAWIP-E-MNLLATGSWDKTLKYW 116 (194)
Q Consensus 88 --------------~~~~v~~~~~~~-~-~~~l~~~~~d~~v~vw 116 (194)
....|.++++.| + ...+..+...+.|...
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 112577888887 2 4555556556665554
No 375
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=54.76 E-value=59 Score=25.44 Aligned_cols=59 Identities=8% Similarity=0.124 Sum_probs=37.3
Q ss_pred CEEEEeeCCCeEEEE-ecccCCcccccccccccCCCCCeeEEEEecCC--CeEEEecCCCeEEE
Q 039044 13 NILVATSWDNQVRCW-EISRGGTGVASVPKASISHDHPVLCSTWKDDG--TTVFSGGCDKQVKM 73 (194)
Q Consensus 13 ~~l~~~~~d~~i~i~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~d~~i~~ 73 (194)
..+..|+.+|.|.-. .... ...... .........+|..|.++++. ..|+.++.++.+++
T Consensus 416 tV~flGT~~G~l~Kvv~~~~-~~~~~e-e~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEH-AVHIIE-ETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEETTSEEEEEEECSS-SEEEEE-EEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEEcCCcEEEEEEecCC-CceEEE-EecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 478889999987543 3322 111111 11222345788899999987 89999988876654
No 376
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=51.75 E-value=53 Score=22.25 Aligned_cols=116 Identities=9% Similarity=-0.010 Sum_probs=63.2
Q ss_pred eeeEEEcCCCCEEEEeeCCCeEEEEecccCCcc---cccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCCC
Q 039044 3 VSSLCFSPKANILVATSWDNQVRCWEISRGGTG---VASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSG 79 (194)
Q Consensus 3 v~~~~~~p~~~~l~~~~~d~~i~i~~~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 79 (194)
+..+....+...++..+..|.+..++...-... ..-...........+..+...+++..++..+..|.++...+..-
T Consensus 118 l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~ 197 (276)
T 3no0_A 118 VVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEI 197 (276)
T ss_dssp EEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGS
T ss_pred EEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHc
Confidence 344444445567888888999888876543210 00001111123456666666666778888899999888876421
Q ss_pred -------CceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEE--EeCC
Q 039044 80 -------GQPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKY--WDTR 119 (194)
Q Consensus 80 -------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~v--wd~~ 119 (194)
+-+..+ ...+.+..+....+...++..+.+|.+.. ++..
T Consensus 198 ~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 198 PKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp CCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred ccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 222223 22334444433333344555666666666 6543
No 377
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=50.94 E-value=61 Score=22.67 Aligned_cols=112 Identities=10% Similarity=-0.016 Sum_probs=67.0
Q ss_pred CCCeeEEEEec---CCCeEEEecCCCeEEEEecCCCCc-------eEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEE
Q 039044 47 DHPVLCSTWKD---DGTTVFSGGCDKQVKMWPLLSGGQ-------PVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYW 116 (194)
Q Consensus 47 ~~~i~~~~~~~---~~~~l~~~~~d~~i~~~d~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vw 116 (194)
...|..+..-+ +...++..+.+|.++--.+..-.. ...+.. ...+..+........++..+..|.+..+
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf 172 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRF 172 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEE
Confidence 45566554443 467899999999999887654211 112333 3445555555555677778889988887
Q ss_pred eCC--CC----Cc-----eeEEecCCeEE--EEecCCCEEEEEcCCCcEEEEECCC
Q 039044 117 DTR--QP----NP-----VHTQQLPDRCY--ALTVRYPLMVVGTADRNLVVFNLQN 159 (194)
Q Consensus 117 d~~--~~----~~-----~~~~~~~~~~~--~~~~~~~~l~~~~~dg~v~~~d~~~ 159 (194)
... .- .. ...+......+ ...+.+.+++..+..|.++.-.+..
T Consensus 173 ~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 173 SATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp ECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred ECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence 765 21 11 11111122222 2233556899999999988877643
No 378
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=49.24 E-value=96 Score=24.47 Aligned_cols=104 Identities=10% Similarity=-0.001 Sum_probs=50.8
Q ss_pred CeeeEEEcCCC-CEEEEeeCCCeEEEEecccCCcccccccccccC----CCCCeeEEEEec-CCCeEEEecCC-------
Q 039044 2 SVSSLCFSPKA-NILVATSWDNQVRCWEISRGGTGVASVPKASIS----HDHPVLCSTWKD-DGTTVFSGGCD------- 68 (194)
Q Consensus 2 ~v~~~~~~p~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~~-~~~~l~~~~~d------- 68 (194)
.|..|+++|.. ..++++...+.| |........-.. ...... ....+.+++++| +.+.++.+...
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv--~rS~D~G~tW~~-i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~ 100 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGA--YRWDPSTETWIP-LLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLP 100 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCE--EEEETTTTEEEE-CCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSC
T ss_pred eeeEEEECCCCCCEEEEEecCCcE--EEeCCCCCCEEE-CcCccCcccccCCCcceEEeCCCCCCEEEEEeccccccccc
Confidence 68899999963 456666655554 444433221111 100001 124588999998 43445444321
Q ss_pred CeEEEEecCC-CCceEEec-cC--------CCcEEEEEecCC-CCEEEEee
Q 039044 69 KQVKMWPLLS-GGQPVTVA-MH--------DAPIKEVAWIPE-MNLLATGS 108 (194)
Q Consensus 69 ~~i~~~d~~~-~~~~~~~~-~~--------~~~v~~~~~~~~-~~~l~~~~ 108 (194)
+...||.-.. ++.-.... .. ...+..++++|. ...++.+.
T Consensus 101 ~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 101 NMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp CCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred CCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 1244554433 33222211 11 012467888884 45555555
No 379
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=48.00 E-value=48 Score=26.03 Aligned_cols=62 Identities=5% Similarity=0.031 Sum_probs=37.6
Q ss_pred CEEEEeeCCCeEEEEecccCCc-ccccccccccCCCCCe-eEEEEecCCCeEEEecCCCeEEEE
Q 039044 13 NILVATSWDNQVRCWEISRGGT-GVASVPKASISHDHPV-LCSTWKDDGTTVFSGGCDKQVKMW 74 (194)
Q Consensus 13 ~~l~~~~~d~~i~i~~~~~~~~-~~~~~~~~~~~~~~~i-~~~~~~~~~~~l~~~~~d~~i~~~ 74 (194)
..+..|+.+|.|.-.-+..... ..............+| ..|.++++...|+.++.++.+++-
T Consensus 413 tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qvP 476 (681)
T 3oky_A 413 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRVP 476 (681)
T ss_dssp EEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEEE
T ss_pred EEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEEE
Confidence 5677899999887544433211 0001111122234566 689999988899998887766653
No 380
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=46.49 E-value=99 Score=23.86 Aligned_cols=55 Identities=9% Similarity=-0.044 Sum_probs=35.5
Q ss_pred eEEEecCCCeEEEEecCCCC----c--eEEec--cCCCcEEEEEecCCCCEEEEeeCCCeEEE
Q 039044 61 TVFSGGCDKQVKMWPLLSGG----Q--PVTVA--MHDAPIKEVAWIPEMNLLATGSWDKTLKY 115 (194)
Q Consensus 61 ~l~~~~~d~~i~~~d~~~~~----~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~v 115 (194)
.++.|+.+|.|.-.-..... . +.++. ....+|..|.++++...|..++.++.+++
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 56678888887643322211 1 22232 24568899999998888888887766665
No 381
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=45.72 E-value=88 Score=23.75 Aligned_cols=65 Identities=17% Similarity=0.053 Sum_probs=34.0
Q ss_pred eeEEEEecCC--CeEEEecCCCeEEEEecCCCC----ceEEec--cCCCcEE-EEEecCCCCEEEEeeCCCeEE
Q 039044 50 VLCSTWKDDG--TTVFSGGCDKQVKMWPLLSGG----QPVTVA--MHDAPIK-EVAWIPEMNLLATGSWDKTLK 114 (194)
Q Consensus 50 i~~~~~~~~~--~~l~~~~~d~~i~~~d~~~~~----~~~~~~--~~~~~v~-~~~~~~~~~~l~~~~~d~~v~ 114 (194)
++.++....+ ..++.|+.+|.|.-..+.... ...++. ....+|. .|.++++..+|..++..+.++
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~k 475 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTR 475 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEeccccce
Confidence 4444444422 246677777776544443221 122222 2234664 777887777777776554444
No 382
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=44.20 E-value=45 Score=25.08 Aligned_cols=70 Identities=13% Similarity=0.088 Sum_probs=36.4
Q ss_pred eeeEEEcCCC--CEEEEeeCCCeEEEEecccCCccc-ccccccccCCCCCeeEEEEecCCCeEEEecCCCeEEE
Q 039044 3 VSSLCFSPKA--NILVATSWDNQVRCWEISRGGTGV-ASVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKM 73 (194)
Q Consensus 3 v~~~~~~p~~--~~l~~~~~d~~i~i~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~ 73 (194)
++.|+..+.+ ..+..|+.+|.|.-.-+....... ............+|. ..+..+++.|+.++.++.++|
T Consensus 407 ~T~iav~~~~~~tV~FlGT~~G~l~Kv~~~~~~~~~~~~~~~~~~~~~~pi~-~~l~~~~~~Lyv~s~~~V~~v 479 (527)
T 4fww_A 407 VTALYVTRLDNVTVAHMGTMDGRILQVELVRSLNYLLYVSNFSLGDSGQPVQ-RDVSRLGDHLLFASGDQVFQV 479 (527)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEECSCCSSCCCEEEEEEETTSCCCBC-SCCEEETTEEEEEETTEEEEE
T ss_pred EEEEEEeccCCEEEEEEECCCCeEEEEEEcCCCCcceEEEEEEecCCCceee-hhcccCCCEEEEEECCEEEEE
Confidence 4566666533 467889999987655443322111 011111222334443 233445567888877765554
No 383
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=43.43 E-value=1e+02 Score=23.58 Aligned_cols=28 Identities=7% Similarity=0.083 Sum_probs=23.6
Q ss_pred CCCeeEEEEecCCCeEEEecCCCeEEEE
Q 039044 47 DHPVLCSTWKDDGTTVFSGGCDKQVKMW 74 (194)
Q Consensus 47 ~~~i~~~~~~~~~~~l~~~~~d~~i~~~ 74 (194)
..+|..|.++++...|+.++.++.+++-
T Consensus 469 ~~pI~~L~ls~~~~~LYV~s~~~V~qVP 496 (565)
T 3oky_B 469 DKRIMGMQLDRASGSLYVAFSTCVIKVP 496 (565)
T ss_dssp CCCCCEEEEEGGGTEEEEECSSCEEEEE
T ss_pred CCceEEEEEcCCCCEEEEEecCeEEEee
Confidence 4678899999999999999988877754
No 384
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=39.35 E-value=1e+02 Score=21.92 Aligned_cols=151 Identities=13% Similarity=0.074 Sum_probs=79.0
Q ss_pred EEEcCCCCEEEEeeCCCeEEEEecccCCc------ccccccccccC-CCCCeeEEEEecCCCeEEEecCCCeEEEEecCC
Q 039044 6 LCFSPKANILVATSWDNQVRCWEISRGGT------GVASVPKASIS-HDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLS 78 (194)
Q Consensus 6 ~~~~p~~~~l~~~~~d~~i~i~~~~~~~~------~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 78 (194)
++.+.-....+.-..||.|..|-...... .....+..... ....|..++.. ....+.-..+|.|..|-...
T Consensus 110 v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~ 187 (389)
T 3kci_A 110 VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGR 187 (389)
T ss_dssp EEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCG
T ss_pred EEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCC
Confidence 45555455666667899999996543211 00011111111 12245555443 34555566789999996532
Q ss_pred CCc-----------eEEecc-CCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCCc---------ee--EEec--CCeE
Q 039044 79 GGQ-----------PVTVAM-HDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPNP---------VH--TQQL--PDRC 133 (194)
Q Consensus 79 ~~~-----------~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~---------~~--~~~~--~~~~ 133 (194)
... ...+.. ....|..++......+.+.-..||.|..|-...... .. .+.. ....
T Consensus 188 ~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v 267 (389)
T 3kci_A 188 YGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 267 (389)
T ss_dssp GGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCE
T ss_pred CCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcE
Confidence 110 111111 223566776644335666667899999996432111 01 1111 1134
Q ss_pred EEEecCCCEEEEEcCCCcEEEEECC
Q 039044 134 YALTVRYPLMVVGTADRNLVVFNLQ 158 (194)
Q Consensus 134 ~~~~~~~~~l~~~~~dg~v~~~d~~ 158 (194)
..++....+.++-..+|.|+.|-..
T Consensus 268 ~~v~~G~~hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 268 VKVECGSQFSVALTKSGAVYTWGKG 292 (389)
T ss_dssp EEEEEETTEEEEEETTSCEEEEECC
T ss_pred EEEeCCCCEEEEEeCCCeEEEEeCC
Confidence 5555556666666788999999653
No 385
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=37.21 E-value=92 Score=20.82 Aligned_cols=108 Identities=8% Similarity=0.005 Sum_probs=60.3
Q ss_pred CCCEEEEeeCCCeEEEEecccCCcc--c-ccc-cccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCC-------C
Q 039044 11 KANILVATSWDNQVRCWEISRGGTG--V-ASV-PKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLS-------G 79 (194)
Q Consensus 11 ~~~~l~~~~~d~~i~i~~~~~~~~~--~-~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~-------~ 79 (194)
....|+..+..|.++-+....-... . ... ..........|..+....++.+++.++.+|.++...+.. +
T Consensus 43 t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G 122 (256)
T 1zvt_A 43 SNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAG 122 (256)
T ss_dssp TTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTC
T ss_pred CCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCc
Confidence 3445666677887766655432110 0 000 011122345666664434566788899999999887643 1
Q ss_pred CceEEeccCCCcEEEEEec-CCCCEEEEeeCCCeEEEEeCC
Q 039044 80 GQPVTVAMHDAPIKEVAWI-PEMNLLATGSWDKTLKYWDTR 119 (194)
Q Consensus 80 ~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~v~vwd~~ 119 (194)
.....+.. ...+-.+... .+...++..+.+|.+..+...
T Consensus 123 ~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~ 162 (256)
T 1zvt_A 123 KALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFPVS 162 (256)
T ss_dssp EECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEEGG
T ss_pred eEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEEEHH
Confidence 12223332 2344444444 345577788889998888764
No 386
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=34.71 E-value=1.7e+02 Score=23.15 Aligned_cols=172 Identities=12% Similarity=0.133 Sum_probs=83.7
Q ss_pred EcCCCCEEEEe-eCC----CeEEEEecccCCccccccccccc-CCC------CCeeEEEEecCCCeEEEe----------
Q 039044 8 FSPKANILVAT-SWD----NQVRCWEISRGGTGVASVPKASI-SHD------HPVLCSTWKDDGTTVFSG---------- 65 (194)
Q Consensus 8 ~~p~~~~l~~~-~~d----~~i~i~~~~~~~~~~~~~~~~~~-~~~------~~i~~~~~~~~~~~l~~~---------- 65 (194)
++|++++++.+ +.. ..++++|+.+++. ....+. ..+ .....++|..+...+++.
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~----~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~ 212 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDF----VKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSS 212 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEE----CTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTT
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCc----CCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcC
Confidence 78998876653 222 3699999988742 111111 000 012445887444444432
Q ss_pred cCCCeEEEEecCCCCc--eEEeccCCCcE-EEEEecCCCC-----EEEEeeC---CCeEEEEeCCCCC-ceeEEecCC-e
Q 039044 66 GCDKQVKMWPLLSGGQ--PVTVAMHDAPI-KEVAWIPEMN-----LLATGSW---DKTLKYWDTRQPN-PVHTQQLPD-R 132 (194)
Q Consensus 66 ~~d~~i~~~d~~~~~~--~~~~~~~~~~v-~~~~~~~~~~-----~l~~~~~---d~~v~vwd~~~~~-~~~~~~~~~-~ 132 (194)
+....|+.|.+-+... ...+......+ .....+++++ .+++.+. ...+.+.|..... ....+..+. .
T Consensus 213 ~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 292 (711)
T 4hvt_A 213 LYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDA 292 (711)
T ss_dssp SSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTC
T ss_pred CCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcc
Confidence 1224688887755432 22333322222 2344456655 2444332 2456666765322 223333332 2
Q ss_pred EEEEecCCCEEEEE----------cCCCcEEEEECCCCC------eeeEE-eeCCCcceeeEEEEecC
Q 039044 133 CYALTVRYPLMVVG----------TADRNLVVFNLQNPQ------TEFKR-INSPLKYQTRCVAAFPD 183 (194)
Q Consensus 133 ~~~~~~~~~~l~~~----------~~dg~v~~~d~~~~~------~~~~~-~~~~~~~~v~~i~~~p~ 183 (194)
.+.....+..++.. ...+.|...|+.++. ..... +.......+..+.+.++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 360 (711)
T 4hvt_A 293 TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD 360 (711)
T ss_dssp EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS
T ss_pred eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC
Confidence 22334455544432 136678899987642 12222 33334456777777765
No 387
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=34.58 E-value=1.7e+02 Score=23.06 Aligned_cols=55 Identities=13% Similarity=0.042 Sum_probs=35.7
Q ss_pred eEEEecCCCeEE-EEecCCCC-------ceEEec--cCCCcEEEEEecCCCCEEEEeeCCCeEEE
Q 039044 61 TVFSGGCDKQVK-MWPLLSGG-------QPVTVA--MHDAPIKEVAWIPEMNLLATGSWDKTLKY 115 (194)
Q Consensus 61 ~l~~~~~d~~i~-~~d~~~~~-------~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~v~v 115 (194)
.++.|+.+|.|. +.-...+. .+.++. ....+|..|.++++..+|.+++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 567888898875 33222211 122222 34568999999999999999988776665
No 388
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=33.82 E-value=1.3e+02 Score=21.54 Aligned_cols=107 Identities=7% Similarity=-0.100 Sum_probs=57.6
Q ss_pred CCeeEEEEecCCCeEEEecCCCeEEEEecCCCCc-----------eEEeccC---CCcEEEEEecCCCCEEEEeeCCCeE
Q 039044 48 HPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQ-----------PVTVAMH---DAPIKEVAWIPEMNLLATGSWDKTL 113 (194)
Q Consensus 48 ~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-----------~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~v 113 (194)
..|..++.... ..+.-..+|.|..|-...... ...+... ...|..++.-. .+.+.-..||.|
T Consensus 232 ~~i~~ia~G~~--hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~~~~~~v~~ia~G~--~hs~al~~~G~v 307 (413)
T 1a12_A 232 VRFQDAFCGAY--FTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQ--HHTVCMDSEGKA 307 (413)
T ss_dssp CCEEEEEEETT--EEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECS--SEEEEEETTSCE
T ss_pred ccEEEEEeCCC--EEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhccCCCceEEEEeccc--ceEEEEeCCCCE
Confidence 34555554433 344445789999997643211 1111111 13366666533 344555678999
Q ss_pred EEEeCCCC---------Cc-e--eEEecCCeEEEEecCCCEEEEEcCCCcEEEEECC
Q 039044 114 KYWDTRQP---------NP-V--HTQQLPDRCYALTVRYPLMVVGTADRNLVVFNLQ 158 (194)
Q Consensus 114 ~vwd~~~~---------~~-~--~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~d~~ 158 (194)
..|-.... +. . ..+........++......++...+|.|+.|-..
T Consensus 308 ~~wG~n~~GqLG~g~~~~~~~~P~~v~~l~~v~~v~~G~~hs~alt~~G~v~~wG~n 364 (413)
T 1a12_A 308 YSLGRAEYGRLGLGEGAEEKSIPTLISRLPAVSSVACGASVGYAVTKDGRVFAWGMG 364 (413)
T ss_dssp EEEECCGGGTTCSCTTCCCEEEEEECCSSSSEEEEEECSSEEEEEETTSCEEEEECC
T ss_pred EEeeCCCCCccCCCCCCccccCCEEecccCceeEEEECcceEEEEeCCCCEEEecCC
Confidence 99964321 00 0 1111112455566666677777789999999654
No 389
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=31.59 E-value=73 Score=18.01 Aligned_cols=47 Identities=9% Similarity=-0.036 Sum_probs=24.7
Q ss_pred EEEEecCCCCEEEEeeCCCeEEEEeCCCCCceeEEecCCeEEEEecCCCEEEEEcCCCcEEEEE
Q 039044 93 KEVAWIPEMNLLATGSWDKTLKYWDTRQPNPVHTQQLPDRCYALTVRYPLMVVGTADRNLVVFN 156 (194)
Q Consensus 93 ~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~v~~~d 156 (194)
..+.+..+|++++... ++.+ +|...+... .+.+.++--.||.+++|+
T Consensus 59 ~~l~l~~dGNLVl~d~-~~~~-iW~S~t~~~---------------~~~~~~~L~~dGnlvly~ 105 (113)
T 3mez_B 59 CFMRLGHSGELDITDD-RLNT-VFVSNTVGQ---------------EGDYVLILQINGQAVVYG 105 (113)
T ss_dssp CEEEECTTSCEEEECT-TSCE-EEECSCCCS---------------SSCCEEEECTTSCEEEEC
T ss_pred EEEEEeCCCcEEEECC-CCCE-EEECCCcCC---------------CCCEEEEEcCCceEEEec
Confidence 3466667777666533 3333 676543211 123445555666666665
No 390
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=30.67 E-value=76 Score=17.89 Aligned_cols=17 Identities=6% Similarity=0.141 Sum_probs=10.4
Q ss_pred CCEEEEEcCCCcEEEEE
Q 039044 140 YPLMVVGTADRNLVVFN 156 (194)
Q Consensus 140 ~~~l~~~~~dg~v~~~d 156 (194)
+.+.+.--.||.+++|+
T Consensus 85 ~~~~l~Lq~dGNlvly~ 101 (111)
T 3mez_A 85 GNYAATLGPDQHVTIYG 101 (111)
T ss_dssp SCCEEEECTTSCEEEEC
T ss_pred cCEEEEECCCCeEEEec
Confidence 34555556677777665
No 391
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=27.39 E-value=1.5e+02 Score=20.39 Aligned_cols=150 Identities=8% Similarity=0.060 Sum_probs=83.5
Q ss_pred cCCCCEEEEeeCCCeEEEEecccCCcccc---cccccccCCCCCeeEEEEecCCCeEEEecCCCeEEEEecCC-------
Q 039044 9 SPKANILVATSWDNQVRCWEISRGGTGVA---SVPKASISHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLS------- 78 (194)
Q Consensus 9 ~p~~~~l~~~~~d~~i~i~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~d~~~------- 78 (194)
-|+...+++.+.+|.|+-..+..-..... ..........+.+..+........++..+..|.++-+....
T Consensus 5 i~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 5 MQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp ---CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred cCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 35677899999999999887765422100 00011112334555555555666777778889877665431
Q ss_pred --CCce---EEeccCCCcEEEEEecC---CCCEEEEeeCCCeEEEEeCCCCC-------ceeEEecCCe--EEEEecCCC
Q 039044 79 --GGQP---VTVAMHDAPIKEVAWIP---EMNLLATGSWDKTLKYWDTRQPN-------PVHTQQLPDR--CYALTVRYP 141 (194)
Q Consensus 79 --~~~~---~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~v~vwd~~~~~-------~~~~~~~~~~--~~~~~~~~~ 141 (194)
|.++ ..+.. ...|..+...+ +..+++..+..|.++...+..-. ....+..... .+.......
T Consensus 85 ~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred CCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence 1111 11222 23455543332 45678888999999988764321 1111222222 223334456
Q ss_pred EEEEEcCCCcEEEEECCC
Q 039044 142 LMVVGTADRNLVVFNLQN 159 (194)
Q Consensus 142 ~l~~~~~dg~v~~~d~~~ 159 (194)
.++..+.+|.+..+....
T Consensus 164 ~i~l~T~~G~~~r~~~~e 181 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRD 181 (312)
T ss_dssp EEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCcEEEEEHHH
Confidence 788899999988887754
No 392
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=26.08 E-value=1.8e+02 Score=20.77 Aligned_cols=72 Identities=10% Similarity=0.061 Sum_probs=39.6
Q ss_pred EEEcCCCCEEEEeeCCCeEEEEecccCCc---ccccccccccCCCCCeeEEEEec-------------------------
Q 039044 6 LCFSPKANILVATSWDNQVRCWEISRGGT---GVASVPKASISHDHPVLCSTWKD------------------------- 57 (194)
Q Consensus 6 ~~~~p~~~~l~~~~~d~~i~i~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~------------------------- 57 (194)
+........++..+.+|.+..++...-.. ...-...........|.++...+
T Consensus 155 v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~ 234 (370)
T 3l6v_A 155 VALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAE 234 (370)
T ss_dssp EEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-----------------------
T ss_pred EEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccccccccccccccccc
Confidence 33334445677778888888887654321 00000111112344555555544
Q ss_pred ----------CCCeEEEecCCCeEEEEecC
Q 039044 58 ----------DGTTVFSGGCDKQVKMWPLL 77 (194)
Q Consensus 58 ----------~~~~l~~~~~d~~i~~~d~~ 77 (194)
++..+++.+..|..+...+.
T Consensus 235 ~~~~~~~~~~~~~~il~vTe~G~gKrt~~~ 264 (370)
T 3l6v_A 235 PAVIDVADNGDVAYILTATENGYGKRTPLA 264 (370)
T ss_dssp ------------CEEEEEETTSEEEEEEGG
T ss_pred ccccccccccCCceEEEeeCCCCEEEEEHH
Confidence 34578888899988887764
No 393
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=26.02 E-value=92 Score=19.85 Aligned_cols=33 Identities=9% Similarity=0.118 Sum_probs=18.6
Q ss_pred CcEEEEEecCCCC-EEEEeeCCCeEEEEeCCCCC
Q 039044 90 APIKEVAWIPEMN-LLATGSWDKTLKYWDTRQPN 122 (194)
Q Consensus 90 ~~v~~~~~~~~~~-~l~~~~~d~~v~vwd~~~~~ 122 (194)
..+.++.|...+. -+++...++++.++|.+-|+
T Consensus 119 ~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 119 KHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp EEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred ceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 3344455544322 34455567788888877554
No 394
>3nvn_B Plexin-C1; beta-propeller, signaling, viral protein-signaling protein C; HET: NDG NAG; 2.26A {Homo sapiens} PDB: 3nvq_B*
Probab=25.92 E-value=2.1e+02 Score=21.44 Aligned_cols=64 Identities=11% Similarity=0.051 Sum_probs=34.5
Q ss_pred CCCEEEEeeCCCeEEEEecccCCcccccccccccCCCCCee-EEEEec-CCCeEEEecCCCeEEEE
Q 039044 11 KANILVATSWDNQVRCWEISRGGTGVASVPKASISHDHPVL-CSTWKD-DGTTVFSGGCDKQVKMW 74 (194)
Q Consensus 11 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~-~~~~l~~~~~d~~i~~~ 74 (194)
+...+..|+.+|.|+---+...................+|. .+.++| ++..|+.++..+.+++.
T Consensus 352 ~~TVlFLGTd~G~L~KVvv~~~~~~~~~~~~~ei~ee~~V~~~L~ldp~~~~~LyV~s~~~V~qVP 417 (476)
T 3nvn_B 352 NRTVLFLGTGDGQLLKVILGENLTSNCPEVIYEIKEETPVFYKLVPDPVKNIYIYLTAGKEVRRIR 417 (476)
T ss_dssp SSEEEEEEETTSEEEEEECCTTSCCCCCEEEEECTTCCCBCSCCEECSSCTTEEEEEETTEEEEEE
T ss_pred CeEEEEEECCCceEEEEEecCCCCccceeEEEeecCCCccccccccCccccceEEEecCcEEEEEE
Confidence 44677889999987633332221100000000012234555 677887 56788888877666654
No 395
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=25.78 E-value=1.9e+02 Score=21.95 Aligned_cols=52 Identities=10% Similarity=0.057 Sum_probs=31.9
Q ss_pred CEEEEEcCCCcEEEEECC-CC-CeeeEEeeCCCccee-eEEEEecCCCeeEEEEe
Q 039044 141 PLMVVGTADRNLVVFNLQ-NP-QTEFKRINSPLKYQT-RCVAAFPDQQGFLVCIH 192 (194)
Q Consensus 141 ~~l~~~~~dg~v~~~d~~-~~-~~~~~~~~~~~~~~v-~~i~~~p~~~~l~~~~~ 192 (194)
..++.|+.+|.|.-.-+. +. ...+..+......+| ..+.++++..+|.+++.
T Consensus 401 tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~ 455 (528)
T 3ol2_B 401 TIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQ 455 (528)
T ss_dssp EEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECS
T ss_pred EEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeC
Confidence 357788999987644443 21 112222222345567 58999999988887753
No 396
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=23.27 E-value=1.9e+02 Score=20.09 Aligned_cols=153 Identities=14% Similarity=0.047 Sum_probs=81.2
Q ss_pred EEEcCCCCEEEEeeCCCeEEEEeccc---CCcccccc--cc-cccCCCCCeeEEEEecC---CCeEEEecCCCeEEEEec
Q 039044 6 LCFSPKANILVATSWDNQVRCWEISR---GGTGVASV--PK-ASISHDHPVLCSTWKDD---GTTVFSGGCDKQVKMWPL 76 (194)
Q Consensus 6 ~~~~p~~~~l~~~~~d~~i~i~~~~~---~~~~~~~~--~~-~~~~~~~~i~~~~~~~~---~~~l~~~~~d~~i~~~d~ 76 (194)
+........|+..+..|.+.-+.... ......-. .. ........|..+..-++ +.+++..+.+|.++-..+
T Consensus 44 ~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l 123 (323)
T 1wp5_A 44 MLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTEL 123 (323)
T ss_dssp EEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEG
T ss_pred EEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEH
Confidence 33334455666677788766555433 21100000 01 11123345655543332 567889999999998876
Q ss_pred CCC------CceE--EeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCCCCC-------ceeEEec--CCe--EEEEe
Q 039044 77 LSG------GQPV--TVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTRQPN-------PVHTQQL--PDR--CYALT 137 (194)
Q Consensus 77 ~~~------~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~-------~~~~~~~--~~~--~~~~~ 137 (194)
..- .-+. .+.. .+.+-.+........++..+.+|.+..+....-. -+..+.. ... .+...
T Consensus 124 ~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~ 202 (323)
T 1wp5_A 124 KHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLI 202 (323)
T ss_dssp GGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEE
T ss_pred HHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEE
Confidence 421 1122 2332 2455555555455667778889988888654211 1121221 222 22222
Q ss_pred cCCC-EEEEEcCCCcEEEEECCC
Q 039044 138 VRYP-LMVVGTADRNLVVFNLQN 159 (194)
Q Consensus 138 ~~~~-~l~~~~~dg~v~~~d~~~ 159 (194)
.++. .+++.+..|..+..++..
T Consensus 203 ~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 203 TSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp CCTTCEEEEEETTSEEEEEEGGG
T ss_pred cCCCcEEEEEECCCceEEEEHHH
Confidence 3344 788889999887777654
No 397
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=21.95 E-value=2.2e+02 Score=20.32 Aligned_cols=114 Identities=13% Similarity=0.079 Sum_probs=60.9
Q ss_pred eEEEcCCCCEEEEeeCCCeEEEEeccc---CCccccccc-cc--ccCCCCCeeEEEEec---CCCeEEEecCCCeEEEEe
Q 039044 5 SLCFSPKANILVATSWDNQVRCWEISR---GGTGVASVP-KA--SISHDHPVLCSTWKD---DGTTVFSGGCDKQVKMWP 75 (194)
Q Consensus 5 ~~~~~p~~~~l~~~~~d~~i~i~~~~~---~~~~~~~~~-~~--~~~~~~~i~~~~~~~---~~~~l~~~~~d~~i~~~d 75 (194)
.+........|+..+..|.+.-+.... ......-.+ .. .......|.++..-. +..+|+.++..|.++...
T Consensus 50 ~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~ 129 (370)
T 3l6v_A 50 QLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTP 129 (370)
T ss_dssp EEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEE
T ss_pred EEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeE
Confidence 334444445666667778766555432 211000000 00 112345566554432 456899999999999887
Q ss_pred cCCCC-------ceEEeccCCCcEEEEEecCCCCEEEEeeCCCeEEEEeCC
Q 039044 76 LLSGG-------QPVTVAMHDAPIKEVAWIPEMNLLATGSWDKTLKYWDTR 119 (194)
Q Consensus 76 ~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~vwd~~ 119 (194)
+..-. ....+.. ...+-.+........++..+..|.+..++..
T Consensus 130 l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 130 LSEFAFRLARGKIAINLDE-GDALVGVALTDGDRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp GGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCEEEEEETTSEEEEEEGG
T ss_pred HHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCceEEEEeCCCeEEEEEcc
Confidence 64321 1112332 3445455544445567777788888777643
No 398
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=20.99 E-value=2.7e+02 Score=22.00 Aligned_cols=66 Identities=17% Similarity=0.071 Sum_probs=39.6
Q ss_pred eeEEEEecCC--CeEEEecCCCeEEEEecCCC-C---ceEEec--cCCCcE-EEEEecCCCCEEEEeeCCCeEEE
Q 039044 50 VLCSTWKDDG--TTVFSGGCDKQVKMWPLLSG-G---QPVTVA--MHDAPI-KEVAWIPEMNLLATGSWDKTLKY 115 (194)
Q Consensus 50 i~~~~~~~~~--~~l~~~~~d~~i~~~d~~~~-~---~~~~~~--~~~~~v-~~~~~~~~~~~l~~~~~d~~v~v 115 (194)
.+.++....+ ..++.|+.+|.|.-.-+... . .+.++. ....+| ..|.++++..+|..++.++.+++
T Consensus 401 lT~VaV~~~~~~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 401 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp BCCCEEEEETTEEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEEEecCceEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 3444444322 34678889998875444321 1 122332 234566 68999998888888887766665
Done!