BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039047
(465 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2H84|A Chain A, Crystal Structure Of The C-terminal Type Iii Polyketide
Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks
Hybrid From Dictyostelium)
pdb|2H84|B Chain B, Crystal Structure Of The C-terminal Type Iii Polyketide
Synthase (pks Iii) Domain Of 'steely1' (a Type I/iii Pks
Hybrid From Dictyostelium)
Length = 374
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 41/276 (14%)
Query: 140 IMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLS 199
I+P ++ ++I+ + KD++ +L MGC A L S+ S+ K +VV +E S
Sbjct: 129 IIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCS 188
Query: 200 PNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCV 259
++ + + ++A+ +F G A ++ +E L+++ C + +++ +
Sbjct: 189 LHFSNTDGGDQMVASSIFADGSAAYIIGCNPRIEETPLYEVMCSINRSFPNTENAMVWDL 248
Query: 260 QTEDEQGRPGFHLG--KNLP---KAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMS 314
+ E G++LG ++P + AFVD LL A K+
Sbjct: 249 EKE------GWNLGLDASIPIVIGSGIEAFVDT-------------LLDKA------KLQ 283
Query: 315 NNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSA 374
+T K F IHTGGK+++ I SL + + H +GN S+
Sbjct: 284 TSTAISAKDC---------EFLIHTGGKSILMNIENSLGIDPKQTKNTWDVYHAYGNMSS 334
Query: 375 ASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSC 410
AS+ +V+ + K L + ++FG G C
Sbjct: 335 ASVIFVMDHARKSKSLPT--YSISLAFGPGLAFEGC 368
>pdb|1U0M|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Synthase (Thns) From Streptomyces Coelicolor A3(2): A
Bacterial Type Iii Polyketide Synthase (Pks) Provides
Insights Into Enzymatic Control Of Reactive Polyketide
Intermediates
pdb|1U0M|B Chain B, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene
Synthase (Thns) From Streptomyces Coelicolor A3(2): A
Bacterial Type Iii Polyketide Synthase (Pks) Provides
Insights Into Enzymatic Control Of Reactive Polyketide
Intermediates
Length = 382
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 120/304 (39%), Gaps = 62/304 (20%)
Query: 114 IAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLI 173
I + LD + + +ID+++ +MPSL++ +IN + + +GC+A
Sbjct: 92 IQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGA 151
Query: 174 SVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGAVILLSNKRS 231
+++ Y NA++V E S Y D + +L N LF G A ++ +
Sbjct: 152 AINRAHDFCTAYPEANALIVACEFCS-LCYQPTDLGVGSLLCNGLFGDGIAAAVVRGRGG 210
Query: 232 ----LERNALFKLKCLVRTHHGARDDSYGCCVQTED----EQGRPGFH--LGKNLPKAAT 281
LERN + + +TED + GFH L K +P
Sbjct: 211 TGVRLERNGSYLIP------------------KTEDWIMYDVKATGFHFLLDKRVPA--- 249
Query: 282 RAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGG 341
+ P+ ++EL GE + +D + +H GG
Sbjct: 250 --------TMEPLAPALKEL-----------------AGEHGWDA---SDLDFYIVHAGG 281
Query: 342 KAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISF 401
++D + L++ + +R TL +GN ++A + L + + +++G R L+ F
Sbjct: 282 PRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLFDEGGVEEGARGLLAGF 341
Query: 402 GAGF 405
G G
Sbjct: 342 GPGI 345
>pdb|1TEE|A Chain A, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|B Chain B, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|C Chain C, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
pdb|1TEE|D Chain D, Crystal Structure Of C205f Mutant Of Pks18 From
Mycobacterium Tuberculosis
Length = 393
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 136/332 (40%), Gaps = 62/332 (18%)
Query: 104 DEMEEFFEDSIAKILDRS-----GIS--PKEIDILVVNISMIAIMPSLSSRIINRYKMRK 156
D M F+E ++ +D S G+ EI +LV+ S I P + I+ +
Sbjct: 104 DRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSP 163
Query: 157 DIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCL 216
I + MGC+A++ ++ + + + M A+VV E S N +D + ++ + L
Sbjct: 164 SISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELFSVNAVFADDINDVVIHSL 223
Query: 217 FRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNL 276
F G A +++ + E+ L K +VR+ D+ TED G LG N
Sbjct: 224 FGDGCAALVIGASQVQEK--LEPGKVVVRSSFSQLLDN------TED-----GIVLGVNH 270
Query: 277 PKAATRAFVDNLR--VISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDH 334
T +NL + S + + E+L G+ + +D
Sbjct: 271 -NGITCELSENLPGYIFSGVAPVVTEML-------------------WDNGLQI-SDIDL 309
Query: 335 FCIHTGGKAVID------GIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYM---- 384
+ IH GG +I+ GI L +D+ L RFGN + SL +VL M
Sbjct: 310 WAIHPGGPKIIEQSVRSLGISAELAAQSWDV------LARFGNMLSVSLIFVLETMVQQA 363
Query: 385 EAKKRLKKGDRVLMISFGAGFKCNSCVWEVVR 416
E+ K + G + +FG G +++++R
Sbjct: 364 ESAKAISTG---VAFAFGPGVTVEGMLFDIIR 392
>pdb|1TED|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|B Chain B, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|C Chain C, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
pdb|1TED|D Chain D, Crystal Structure Of A Type Iii Polyketide Synthase Pks18
From Mycobacterium Tuberculosis
Length = 393
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 136/332 (40%), Gaps = 62/332 (18%)
Query: 104 DEMEEFFEDSIAKILDRS-----GIS--PKEIDILVVNISMIAIMPSLSSRIINRYKMRK 156
D M F+E ++ +D S G+ EI +LV+ S I P + I+ +
Sbjct: 104 DRMHLFYEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTGFIAPGVDVAIVKELGLSP 163
Query: 157 DIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCL 216
I + MGC+A++ ++ + + + M A+VV E S N +D + ++ + L
Sbjct: 164 SISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNAVFADDINDVVIHSL 223
Query: 217 FRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNL 276
F G A +++ + E+ L K +VR+ D+ TED G LG N
Sbjct: 224 FGDGCAALVIGASQVQEK--LEPGKVVVRSSFSQLLDN------TED-----GIVLGVNH 270
Query: 277 PKAATRAFVDNLR--VISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDH 334
T +NL + S + + E+L G+ + +D
Sbjct: 271 -NGITCELSENLPGYIFSGVAPVVTEML-------------------WDNGLQI-SDIDL 309
Query: 335 FCIHTGGKAVID------GIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYM---- 384
+ IH GG +I+ GI L +D+ L RFGN + SL +VL M
Sbjct: 310 WAIHPGGPKIIEQSVRSLGISAELAAQSWDV------LARFGNMLSVSLIFVLETMVQQA 363
Query: 385 EAKKRLKKGDRVLMISFGAGFKCNSCVWEVVR 416
E+ K + G + +FG G +++++R
Sbjct: 364 ESAKAISTG---VAFAFGPGVTVEGMLFDIIR 392
>pdb|1Z1E|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis
Hypogaea
pdb|1Z1F|A Chain A, Crystal Structure Of Stilbene Synthase From Arachis
Hypogaea (Resveratrol-Bound Form)
Length = 390
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/321 (19%), Positives = 129/321 (40%), Gaps = 48/321 (14%)
Query: 103 IDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFN 162
I E+ +++ K + G +I L+ + +P + +I + +K +
Sbjct: 100 IREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPSVKRYM 159
Query: 163 LTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSG 220
+ GC A + + + + + K+ ++V SE+ S + ++ M ++ LF G
Sbjct: 160 MYHQGCFAGGTVLRLAKDLAENNKDARVLIVCSENTSVTFRGPSETDMDSLVGQALFADG 219
Query: 221 GAVILLSNKRSLE-RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKA 279
A I++ + E N LF++ V T +S+G E G F+L K++P
Sbjct: 220 AAAIIIGSDPVPEVENPLFEI---VSTDQQLVPNSHGAIGGLLREVGLT-FYLNKSVPDI 275
Query: 280 ATRAFVDNL-RVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIH 338
++ D L + P+ G++ + + H
Sbjct: 276 ISQNINDALSKAFDPL------------------------------GISDYNSI-FWIAH 304
Query: 339 TGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKG----- 393
GG+A++D + ++L ++ R L +GN S+A +++++ M KK L+ G
Sbjct: 305 PGGRAILDQVEEKVNLKPEKMKATRDVLSNYGNMSSACVFFIMDLMR-KKSLEAGLKTTG 363
Query: 394 ---DRVLMISFGAGFKCNSCV 411
D ++ FG G + V
Sbjct: 364 EGLDWGVLFGFGPGLTIETVV 384
>pdb|2EBD|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl-carrier-protein]
Synthase Iii From Aquifex Aeolicus Vf5
pdb|2EBD|B Chain B, Crystal Structure Of 3-oxoacyl-[acyl-carrier-protein]
Synthase Iii From Aquifex Aeolicus Vf5
Length = 309
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 136/319 (42%), Gaps = 63/319 (19%)
Query: 98 TLQDGIDEMEEFFEDSIA--------KILDRSGISPKEIDILVV-NISMIAIMPSLSSRI 148
T + GI E E++I + L + +SP+E+D++++ ++ PS + +
Sbjct: 34 TTRTGIKERRIAKEETITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLV 93
Query: 149 INRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSP--NWYSGN 206
+ K K + F+++ CS + ++DI S K+ K N +V+ +E LS +W
Sbjct: 94 QAQLKA-KGVYAFDISA-ACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEAVDW---E 148
Query: 207 DRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQG 266
DRS + LF G ++++ RS +++ + + G+ ++
Sbjct: 149 DRSTCV---LFGDGAGAVVVT--RSEDKSDILATRMYA---EGSLEEL------------ 188
Query: 267 RPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGV 326
H DN I + REL + A VR M + +KAGV
Sbjct: 189 ---LH-------------ADNCGYIR---MKGRELFKVA----VRSMEEVCREVLEKAGV 225
Query: 327 NFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEA 386
V H +I+ + L++ + E + + ++GNTSAAS+ L
Sbjct: 226 KPEE-VSLVIPHQANVRIINALAEKLNIPK---EKVFVNIQKYGNTSAASIPIALHEAIK 281
Query: 387 KKRLKKGDRVLMISFGAGF 405
+ ++K+GD +LM + G G
Sbjct: 282 EGKVKRGDLILMTAMGGGL 300
>pdb|1UB7|A Chain A, The Crystal Analysis Of Beta-Keroacyl-[acyl Carrier
Protein] Synthase Iii (Fabh)from Thermus Thermophilus.
pdb|1UB7|B Chain B, The Crystal Analysis Of Beta-Keroacyl-[acyl Carrier
Protein] Synthase Iii (Fabh)from Thermus Thermophilus.
pdb|1UB7|C Chain C, The Crystal Analysis Of Beta-Keroacyl-[acyl Carrier
Protein] Synthase Iii (Fabh)from Thermus Thermophilus.
pdb|1UB7|D Chain D, The Crystal Analysis Of Beta-Keroacyl-[acyl Carrier
Protein] Synthase Iii (Fabh)from Thermus Thermophilus
Length = 322
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 299 RELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYD 358
RE+ ++A VR M+ T + +KAG+ + F H +ID L L
Sbjct: 212 REVFKFA----VRVMNTATLEAIEKAGLTPED-IRLFVPHQANLRIIDAARERLGLP--- 263
Query: 359 LEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCV 411
E + + R+GNTS AS+ L R+++GD VL++SFGAG + V
Sbjct: 264 WERVAVNVDRYGNTSTASIPLALKEAVDAGRIREGDHVLLVSFGAGLTWAAAV 316
>pdb|1QLV|A Chain A, Pyrone Synthase (Pys) From Gerbera Hybrida
pdb|1QLV|B Chain B, Pyrone Synthase (Pys) From Gerbera Hybrida
pdb|1EE0|A Chain A, 2-Pyrone Synthase Complexed With Acetoacetyl-Coa
pdb|1EE0|B Chain B, 2-Pyrone Synthase Complexed With Acetoacetyl-Coa
Length = 402
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/316 (18%), Positives = 124/316 (39%), Gaps = 44/316 (13%)
Query: 111 EDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSA 170
+++ K +D G+ +I L+ + MP +++ + +K + L G +A
Sbjct: 112 KEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLGLSPSVKRYMLYQQGXAA 171
Query: 171 SLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGAVILLSN 228
+ + + + + K ++V SE + ++ N+ + ++A LF G A +++ +
Sbjct: 172 GGTVLRLAKDLAENNKGSRVLIVCSEITAILFHGPNENHLDSLVAQALFGDGAAALIVGS 231
Query: 229 KRSLE-RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDN 287
L +F++ V T D+ ++ +G F L +++P
Sbjct: 232 GPHLAVERPIFEI---VSTDQTILPDTEKA-MKLHLREGGLTFQLHRDVP---------- 277
Query: 288 LRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDG 347
+ + + N K G+ V + +H GG+A++D
Sbjct: 278 -------------------LMVAKNIENAAEKALSPLGITDWNSV-FWMVHPGGRAILDQ 317
Query: 348 IGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVL------AYMEAKKRLKKG-DRVLMIS 400
+ L+L E L +R L +GN +A + +++ + E K +G D ++
Sbjct: 318 VERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFG 377
Query: 401 FGAGFKCNSCVWEVVR 416
FG G + V VR
Sbjct: 378 FGPGMTVETVVLRSVR 393
>pdb|3H76|A Chain A, Crystal Structure Of Pqsd, A Key Enzyme In Pseudomonas
Aeruginosa Quinolone Signal Biosynthesis Pathway
pdb|3H76|B Chain B, Crystal Structure Of Pqsd, A Key Enzyme In Pseudomonas
Aeruginosa Quinolone Signal Biosynthesis Pathway
Length = 359
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 125/299 (41%), Gaps = 35/299 (11%)
Query: 116 KILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLIS 174
+ ++ +G+ P++ID+L+VN +S PS + I +R I V ++ CS L
Sbjct: 84 QAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRH-IPVLDIRAQ-CSGLLYG 141
Query: 175 VDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLER 234
+ + R + +VV E LS +DR L+ L GAV++ S SLE
Sbjct: 142 LQMARGQILAGLARHVLVVCGEVLS-KRMDCSDRGRNLSILLGDGAGAVVV-SAGESLE- 198
Query: 235 NALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPM 294
+ L L+ GA + + + P F L +N+ + F
Sbjct: 199 DGLLDLRL------GADGNYFDLLMTAAPGSASPTF-LDENVLREGGGEF---------- 241
Query: 295 ILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTG-VDHFCIHTGGKAVIDGIGFSLD 353
++ R + +A T VR GE A +DH H ++D + L
Sbjct: 242 LMRGRPMFEHASQTLVRI------AGEMLAAHELTLDDIDHVICHQPNLRILDAVQEQLG 295
Query: 354 LTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVW 412
+ ++ +T+ R GN ++AS LA ++ G RVL++++G+G + ++
Sbjct: 296 IPQHKFA---VTVDRLGNMASASTPVTLAMFWPD--IQPGQRVLVLTYGSGATWGAALY 349
>pdb|3TSY|A Chain A, 4-Coumaroyl-Coa Ligase::stilbene Synthase Fusion Protein
Length = 979
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 122/324 (37%), Gaps = 50/324 (15%)
Query: 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLT 164
E+ + +++ K L G +I LV + MP ++ N + ++ L
Sbjct: 688 EVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLY 747
Query: 165 GMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGA 222
GC A + + + + +VV SE + ++ ++ ++ LF G A
Sbjct: 748 HQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQALFGDGSA 807
Query: 223 VILLSNKR--SLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAA 280
+++ + S+ER LF+L +T +S G E G FHL N+P
Sbjct: 808 AVIVGSDPDISIER-PLFQLVSAAQTF---IPNSAGAIAGNLREVGL-TFHLWPNVPTLI 862
Query: 281 TRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTG 340
+ + + L A P G F + H G
Sbjct: 863 SEN--------------VEKCLTQAF----------DPLGISDWNSLF------WIAHPG 892
Query: 341 GKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV---- 396
G A++D + L+L + LE R L +GN S+A + ++L M +K+ KG+R
Sbjct: 893 GPAILDAVEAKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEM--RKKSLKGERATTGE 950
Query: 397 -----LMISFGAGFKCNSCVWEVV 415
++ FG G + V +
Sbjct: 951 GLDWGVLFGFGPGLTIETVVLHSI 974
>pdb|1CGZ|A Chain A, Chalcone Synthase From Alfalfa Complexed With Resveratrol
pdb|1CGK|A Chain A, Chalcone Synthase From Alfalfa Complexed With Naringenin
Length = 389
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 121/326 (37%), Gaps = 54/326 (16%)
Query: 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLT 164
E+ +++ K + G +I L+V + MP ++ +R +K + +
Sbjct: 101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY 160
Query: 165 GMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGA 222
GC A + + + + + K +VV SE + + +D + ++ LF G A
Sbjct: 161 QQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAA 220
Query: 223 VILLSNKRSLE-RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLP---- 277
+++ + E +F+ +V T DS G E G FHL K++P
Sbjct: 221 ALIVGSDPVPEIEKPIFE---MVWTAQTIAPDSEGAIDGHLREAGL-TFHLLKDVPGIVS 276
Query: 278 KAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCI 337
K T+A V+ + G++ + +
Sbjct: 277 KNITKALVEAFEPL---------------------------------GISDYNSI-FWIA 302
Query: 338 HTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV- 396
H GG A++D + L L + R L +GN S+A + ++L M KK + G +
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR-KKSTQNGLKTT 361
Query: 397 -------LMISFGAGFKCNSCVWEVV 415
++ FG G + V V
Sbjct: 362 GEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|3AWJ|A Chain A, Crystal Structure Of The Huperzia Serrata Polyketide
Synthase 1 Complexed With Coa-Sh
pdb|3AWJ|B Chain B, Crystal Structure Of The Huperzia Serrata Polyketide
Synthase 1 Complexed With Coa-Sh
pdb|3AWK|A Chain A, Crystal Structure Of The Polyketide Synthase 1 From
Huperzia Serrata
Length = 402
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 126/315 (40%), Gaps = 44/315 (13%)
Query: 96 NPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMR 155
+P + E+ + +++ + + G +I LV + MP ++ +R
Sbjct: 105 DPRQDIAVLEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSGVDMPGADFQLAKLLGLR 164
Query: 156 KDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILA 213
+K L G A + + + + + K +V SE + + + ++ + ++
Sbjct: 165 PTVKRVMLYQQGXYAGATVLRVAKDLAENNKGARVLVACSEVTAVTFRAPSETHLDGLVG 224
Query: 214 NCLFRSGGAVILL-SNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHL 272
+ LF G A +++ S+ E LF++ DS G E G FHL
Sbjct: 225 SALFGDGAAALIVGSDPVPQEEKPLFEIHW---AGEAVLPDSDGAINGHLREAGLI-FHL 280
Query: 273 GKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGV 332
K++P ++ +D + + E L Y V+F +
Sbjct: 281 LKDVPGLISKN-IDKV---------LAEPLEY---------------------VHFPSYN 309
Query: 333 DHF-CIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLK 391
D F +H GG A++D I L L+ ++ +R L +GN S+AS+ +VL + K
Sbjct: 310 DMFWAVHPGGPAILDQIEAKLGLSTDKMQASRDVLASYGNMSSASVLFVLDQIR-----K 364
Query: 392 KGDRVLMISFGAGFK 406
+ + + + G GF+
Sbjct: 365 NSEELHLPTTGEGFE 379
>pdb|3A5S|A Chain A, Benzalacetone Synthase (I207lL208F)
pdb|3A5S|B Chain B, Benzalacetone Synthase (I207lL208F)
Length = 387
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 121/320 (37%), Gaps = 48/320 (15%)
Query: 108 EFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMG 167
E +++ K + G +I L+V MP ++ + +K F +G
Sbjct: 100 ELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMFYHLG 159
Query: 168 CSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGAVIL 225
C A + + + + + K ++V SE + + ++ + ++ LF G A ++
Sbjct: 160 CYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTCFRGPSETHLDSMIGQALFGDGAAAVI 219
Query: 226 LSNKRSLE-RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAF 284
+ L +F+L V T +S+G E G FHL K +P
Sbjct: 220 VGADPDLTVERPIFEL---VSTAQTIVPESHGAIEGHLLESGL-SFHLYKTVP-----TL 270
Query: 285 VDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCI-HTGGKA 343
+ N I+ L A TP +N F I H GG A
Sbjct: 271 ISN---------NIKTCLSDAF----------TP-------LNISDWNSLFWIAHPGGPA 304
Query: 344 VIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV------- 396
++D + + L + L+ R L +GN S+A++++++ M KK L+ G
Sbjct: 305 ILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMR-KKSLENGQATTGEGLEW 363
Query: 397 -LMISFGAGFKCNSCVWEVV 415
++ FG G + V V
Sbjct: 364 GVLFGFGPGITVETVVLRSV 383
>pdb|3H78|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Pqsd C112a
Mutant In Complex With Anthranilic Acid
pdb|3H78|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa Pqsd C112a
Mutant In Complex With Anthranilic Acid
Length = 359
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 124/299 (41%), Gaps = 35/299 (11%)
Query: 116 KILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLIS 174
+ ++ +G+ P++ID+L+VN +S PS + I +R I V ++ S L
Sbjct: 84 QAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRH-IPVLDIRAQ-ASGLLYG 141
Query: 175 VDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLER 234
+ + R + +VV E LS +DR L+ L GAV++ S SLE
Sbjct: 142 LQMARGQILAGLARHVLVVCGEVLS-KRMDCSDRGRNLSILLGDGAGAVVV-SAGESLE- 198
Query: 235 NALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPM 294
+ L L+ GA + + + P F L +N+ + F
Sbjct: 199 DGLLDLRL------GADGNYFDLLMTAAPGSASPTF-LDENVLREGGGEF---------- 241
Query: 295 ILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTG-VDHFCIHTGGKAVIDGIGFSLD 353
++ R + +A T VR GE A +DH H ++D + L
Sbjct: 242 LMRGRPMFEHASQTLVRI------AGEMLAAHELTLDDIDHVICHQPNLRILDAVQEQLG 295
Query: 354 LTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVW 412
+ ++ +T+ R GN ++AS LA ++ G RVL++++G+G + ++
Sbjct: 296 IPQHKFA---VTVDRLGNMASASTPVTLAMFWPD--IQPGQRVLVLTYGSGATWGAALY 349
>pdb|3A5Q|A Chain A, Benzalacetone Synthase From Rheum Palmatum
pdb|3A5Q|B Chain B, Benzalacetone Synthase From Rheum Palmatum
pdb|3A5R|A Chain A, Benzalacetone Synthase From Rheum Palmatum Complexed With
4-Coumaroyl- Primed Monoketide Intermediate
pdb|3A5R|B Chain B, Benzalacetone Synthase From Rheum Palmatum Complexed With
4-Coumaroyl- Primed Monoketide Intermediate
Length = 387
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/321 (21%), Positives = 120/321 (37%), Gaps = 50/321 (15%)
Query: 108 EFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMG 167
E +++ K + G +I L+V MP ++ + +K F +G
Sbjct: 100 ELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLDLDPSVKRFMFYHLG 159
Query: 168 CSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDR----SMILANCLFRSGGAV 223
C A + + + + + K ++V SE ++ + G SMI L AV
Sbjct: 160 CYAGGTVLRLAKDIAENNKGARVLIVCSE-MTTTCFRGPSETHLDSMIGQAILGDGAAAV 218
Query: 224 ILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRA 283
I+ ++ +F+L V T +S+G E G FHL K +P
Sbjct: 219 IVGADPDLTVERPIFEL---VSTAQTIVPESHGAIEGHLLESGL-SFHLYKTVP-----T 269
Query: 284 FVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCI-HTGGK 342
+ N I+ L A TP +N F I H GG
Sbjct: 270 LISN---------NIKTCLSDAF----------TP-------LNISDWNSLFWIAHPGGP 303
Query: 343 AVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV------ 396
A++D + + L + L+ R L +GN S+A++++++ M KK L+ G
Sbjct: 304 AILDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMR-KKSLENGQATTGEGLE 362
Query: 397 --LMISFGAGFKCNSCVWEVV 415
++ FG G + V V
Sbjct: 363 WGVLFGFGPGITVETVVLRSV 383
>pdb|3GWA|A Chain A, 1.6 Angstrom Crystal Structure Of
3-Oxoacyl-(Acyl-Carrier-Protein) Synthase Iii
pdb|3GWA|B Chain B, 1.6 Angstrom Crystal Structure Of
3-Oxoacyl-(Acyl-Carrier-Protein) Synthase Iii
pdb|3GWE|A Chain A, 2.1 Angstrom Crystal Structure Of
3-Oxoacyl-(Acyl-Carrier-Protein) Synthase Iii
pdb|3GWE|B Chain B, 2.1 Angstrom Crystal Structure Of
3-Oxoacyl-(Acyl-Carrier-Protein) Synthase Iii
Length = 365
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/307 (18%), Positives = 123/307 (40%), Gaps = 45/307 (14%)
Query: 116 KILDRSGISPKEIDILVVNISMIA-IMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLIS 174
K+ + + ++D +++ ++P+ + + +R + ++ +GCS +
Sbjct: 90 KLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGALDVN-LGCSGYVYG 148
Query: 175 VDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGG-AVILLSNKRSLE 233
+ + + + +T +++T+++ S + D+S+ LF G A +++ LE
Sbjct: 149 LSLAKGLVETGAARCVLLLTADTYS-KYLHPLDKSV---RTLFGDGASATAVIAEHGELE 204
Query: 234 RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNL---PKAATRA-----FV 285
R F V D +G P + L PK+A A
Sbjct: 205 RIGPF--------------------VFGTDGRGAPNLIVKAGLFREPKSADSAREHEDAS 244
Query: 286 DNLRVISPMILPIRELLRYALVTFVRKMSNNTP-KGEKKAGVNFRTGVDHFCIHTGGKAV 344
N+R + + E++ ++L R GE R +D F +H + +
Sbjct: 245 GNVRTDEHLYMNGAEVMAFSLAEVPRAADRLLALAGEP------RENIDCFVLHQANRFM 298
Query: 345 IDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAG 404
+D + + + E+ + + GNT +++L L M A L +G R++++ FG G
Sbjct: 299 LDALRKKMKIPEHKFP---VLMEHCGNTVSSTLPLALETMRANGTLARGMRLMLLGFGVG 355
Query: 405 FKCNSCV 411
+ C+
Sbjct: 356 YSWAGCL 362
>pdb|1CML|A Chain A, Chalcone Synthase From Alfalfa Complexed With Malonyl-Coa
pdb|1D6F|A Chain A, Chalcone Synthase C164a Mutant
Length = 389
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 118/326 (36%), Gaps = 54/326 (16%)
Query: 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLT 164
E+ +++ K + G +I L+V + MP ++ +R +K + +
Sbjct: 101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY 160
Query: 165 GMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGA 222
G A + + + + + K +VV SE + + +D + ++ LF G A
Sbjct: 161 QQGAFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAA 220
Query: 223 VILLSNKRSLE-RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLP---- 277
+++ + E +F++ V T DS G E G FHL K++P
Sbjct: 221 ALIVGSDPVPEIEKPIFEM---VWTAQTIAPDSEGAIDGHLREAGLT-FHLLKDVPGIVS 276
Query: 278 KAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCI 337
K T+A V+ P G F +
Sbjct: 277 KNITKALVEAFE----------------------------PLGISDYNSIF------WIA 302
Query: 338 HTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV- 396
H GG A++D + L L + R L +GN S+A + ++L M KK + G +
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR-KKSTQNGLKTT 361
Query: 397 -------LMISFGAGFKCNSCVWEVV 415
++ FG G + V V
Sbjct: 362 GEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|3H77|A Chain A, Crystal Structure Of Pseudomonas Aeruginosa Pqsd In A
Covalent Complex With Anthranilate
pdb|3H77|B Chain B, Crystal Structure Of Pseudomonas Aeruginosa Pqsd In A
Covalent Complex With Anthranilate
Length = 359
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 124/299 (41%), Gaps = 35/299 (11%)
Query: 116 KILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLIS 174
+ ++ +G+ P++ID+L+VN +S PS + I +R I V ++ S L
Sbjct: 84 QAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRH-IPVLDIRAQ-XSGLLYG 141
Query: 175 VDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLER 234
+ + R + +VV E LS +DR L+ L GAV++ S SLE
Sbjct: 142 LQMARGQILAGLARHVLVVCGEVLS-KRMDCSDRGRNLSILLGDGAGAVVV-SAGESLE- 198
Query: 235 NALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPM 294
+ L L+ GA + + + P F L +N+ + F
Sbjct: 199 DGLLDLRL------GADGNYFDLLMTAAPGSASPTF-LDENVLREGGGEF---------- 241
Query: 295 ILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTG-VDHFCIHTGGKAVIDGIGFSLD 353
++ R + +A T VR GE A +DH H ++D + L
Sbjct: 242 LMRGRPMFEHASQTLVRI------AGEMLAAHELTLDDIDHVICHQPNLRILDAVQEQLG 295
Query: 354 LTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVW 412
+ ++ +T+ R GN ++AS LA ++ G RVL++++G+G + ++
Sbjct: 296 IPQHKFA---VTVDRLGNMASASTPVTLAMFWPD--IQPGQRVLVLTYGSGATWGAALY 349
>pdb|1CHW|A Chain A, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa
pdb|1CHW|B Chain B, Chalcone Synthase From Alfalfa Complexed With Hexanoyl-Coa
Length = 389
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 118/326 (36%), Gaps = 54/326 (16%)
Query: 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLT 164
E+ +++ K + G +I L+V + MP ++ +R +K + +
Sbjct: 101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY 160
Query: 165 GMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGA 222
G A + + + + + K +VV SE + + +D + ++ LF G A
Sbjct: 161 QQGSFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAA 220
Query: 223 VILLSNKRSLE-RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLP---- 277
+++ + E +F++ V T DS G E G FHL K++P
Sbjct: 221 ALIVGSDPVPEIEKPIFEM---VWTAQTIAPDSEGAIDGHLREAGLT-FHLLKDVPGIVS 276
Query: 278 KAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCI 337
K T+A V+ P G F +
Sbjct: 277 KNITKALVEAFE----------------------------PLGISDYNSIF------WIA 302
Query: 338 HTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV- 396
H GG A++D + L L + R L +GN S+A + ++L M KK + G +
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR-KKSTQNGLKTT 361
Query: 397 -------LMISFGAGFKCNSCVWEVV 415
++ FG G + V V
Sbjct: 362 GEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|1I86|A Chain A, Chalcone Synthase, G256a Mutant
Length = 389
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 118/326 (36%), Gaps = 54/326 (16%)
Query: 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLT 164
E+ +++ K + G +I L+V + MP ++ +R +K + +
Sbjct: 101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY 160
Query: 165 GMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGA 222
G A + + + + + K +VV SE + + +D + ++ LF G A
Sbjct: 161 QQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAA 220
Query: 223 VILLSNKRSLE-RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLP---- 277
+++ + E +F++ V T DS G E G FHL K++P
Sbjct: 221 ALIVGSDPVPEIEKPIFEM---VWTAQTIAPDSEGAIDAHLREAGL-TFHLLKDVPGIVS 276
Query: 278 KAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCI 337
K T+A V+ P G F +
Sbjct: 277 KNITKALVEAFE----------------------------PLGISDYNSIF------WIA 302
Query: 338 HTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV- 396
H GG A++D + L L + R L +GN S+A + ++L M KK + G +
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR-KKSTQNGLKTT 361
Query: 397 -------LMISFGAGFKCNSCVWEVV 415
++ FG G + V V
Sbjct: 362 GEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|1BI5|A Chain A, Chalcone Synthase From Alfalfa
Length = 389
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 118/326 (36%), Gaps = 54/326 (16%)
Query: 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLT 164
E+ +++ K + G +I L+V + MP ++ +R +K + +
Sbjct: 101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY 160
Query: 165 GMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGA 222
G A + + + + + K +VV SE + + +D + ++ LF G A
Sbjct: 161 QQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAA 220
Query: 223 VILLSNKRSLE-RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLP---- 277
+++ + E +F++ V T DS G E G FHL K++P
Sbjct: 221 ALIVGSDPVPEIEKPIFEM---VWTAQTIAPDSEGAIDGHLREAGLT-FHLLKDVPGIVS 276
Query: 278 KAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCI 337
K T+A V+ P G F +
Sbjct: 277 KNITKALVEAFE----------------------------PLGISDYNSIF------WIA 302
Query: 338 HTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV- 396
H GG A++D + L L + R L +GN S+A + ++L M KK + G +
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR-KKSTQNGLKTT 361
Query: 397 -------LMISFGAGFKCNSCVWEVV 415
++ FG G + V V
Sbjct: 362 GEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|1I89|A Chain A, Chalcone Synthase (G256l)
pdb|1I89|B Chain B, Chalcone Synthase (G256l)
Length = 389
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 118/326 (36%), Gaps = 54/326 (16%)
Query: 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLT 164
E+ +++ K + G +I L+V + MP ++ +R +K + +
Sbjct: 101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY 160
Query: 165 GMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGA 222
G A + + + + + K +VV SE + + +D + ++ LF G A
Sbjct: 161 QQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAA 220
Query: 223 VILLSNKRSLE-RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLP---- 277
+++ + E +F++ V T DS G E G FHL K++P
Sbjct: 221 ALIVGSDPVPEIEKPIFEM---VWTAQTIAPDSEGAIDLHLREAGL-TFHLLKDVPGIVS 276
Query: 278 KAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCI 337
K T+A V+ P G F +
Sbjct: 277 KNITKALVEAFE----------------------------PLGISDYNSIF------WIA 302
Query: 338 HTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV- 396
H GG A++D + L L + R L +GN S+A + ++L M KK + G +
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR-KKSTQNGLKTT 361
Query: 397 -------LMISFGAGFKCNSCVWEVV 415
++ FG G + V V
Sbjct: 362 GEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|1I88|A Chain A, Chalcone Synthase (G256v)
pdb|1I88|B Chain B, Chalcone Synthase (G256v)
Length = 389
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 118/326 (36%), Gaps = 54/326 (16%)
Query: 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLT 164
E+ +++ K + G +I L+V + MP ++ +R +K + +
Sbjct: 101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY 160
Query: 165 GMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGA 222
G A + + + + + K +VV SE + + +D + ++ LF G A
Sbjct: 161 QQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAA 220
Query: 223 VILLSNKRSLE-RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLP---- 277
+++ + E +F++ V T DS G E G FHL K++P
Sbjct: 221 ALIVGSDPVPEIEKPIFEM---VWTAQTIAPDSEGAIDVHLREAGL-TFHLLKDVPGIVS 276
Query: 278 KAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCI 337
K T+A V+ P G F +
Sbjct: 277 KNITKALVEAFE----------------------------PLGISDYNSIF------WIA 302
Query: 338 HTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV- 396
H GG A++D + L L + R L +GN S+A + ++L M KK + G +
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR-KKSTQNGLKTT 361
Query: 397 -------LMISFGAGFKCNSCVWEVV 415
++ FG G + V V
Sbjct: 362 GEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|1BQ6|A Chain A, Chalcone Synthase From Alfalfa With Coenzyme A
Length = 388
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/326 (19%), Positives = 120/326 (36%), Gaps = 54/326 (16%)
Query: 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLT 164
E+ +++ K + G +I L+V + MP ++ +R +K + +
Sbjct: 100 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY 159
Query: 165 GMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGA 222
G A + + + + + K +VV SE + + +D + ++ LF G A
Sbjct: 160 QQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAA 219
Query: 223 VILLSNKRSLE-RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLP---- 277
+++ + E +F++ V T DS G E G FHL K++P
Sbjct: 220 ALIVGSDPVPEIEKPIFEM---VWTAQTIAPDSEGAIDGHLREAGLT-FHLLKDVPGIVS 275
Query: 278 KAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCI 337
K T+A V+ + G++ + +
Sbjct: 276 KNITKALVEAFEPL---------------------------------GISDYNSI-FWIA 301
Query: 338 HTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV- 396
H GG A++D + L L + R L +GN S+A + ++L M KK + G +
Sbjct: 302 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR-KKSTQNGLKTT 360
Query: 397 -------LMISFGAGFKCNSCVWEVV 415
++ FG G + V V
Sbjct: 361 GEGLEWGVLFGFGPGLTIETVVLRSV 386
>pdb|1I8B|A Chain A, Chalcone Synthase (g256f)
pdb|1I8B|B Chain B, Chalcone Synthase (g256f)
Length = 389
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 118/326 (36%), Gaps = 54/326 (16%)
Query: 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLT 164
E+ +++ K + G +I L+V + MP ++ +R +K + +
Sbjct: 101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY 160
Query: 165 GMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGA 222
G A + + + + + K +VV SE + + +D + ++ LF G A
Sbjct: 161 QQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAA 220
Query: 223 VILLSNKRSLE-RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLP---- 277
+++ + E +F++ V T DS G E G FHL K++P
Sbjct: 221 ALIVGSDPVPEIEKPIFEM---VWTAQTIAPDSEGAIDFHLREAGL-TFHLLKDVPGIVS 276
Query: 278 KAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCI 337
K T+A V+ P G F +
Sbjct: 277 KNITKALVEAFE----------------------------PLGISDYNSIF------WIA 302
Query: 338 HTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV- 396
H GG A++D + L L + R L +GN S+A + ++L M KK + G +
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR-KKSTQNGLKTT 361
Query: 397 -------LMISFGAGFKCNSCVWEVV 415
++ FG G + V V
Sbjct: 362 GEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|1U0V|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Of Specificity Of Type Iii Polyketide
Synthases: 18xchs Structure
pdb|1U0V|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Of Specificity Of Type Iii Polyketide
Synthases: 18xchs Structure
pdb|1U0W|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|C Chain C, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
pdb|1U0W|D Chain D, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: 18xchs+resveratrol Structure
Length = 393
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 118/326 (36%), Gaps = 54/326 (16%)
Query: 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLT 164
E+ +++ K + G +I L+V + +P ++ +R +K +
Sbjct: 105 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCSTTTPDLPGADYQLTKLLGLRPYVKRVGVF 164
Query: 165 GMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGA 222
GC A + + + + + K +VV SE + + +D + ++ LF G A
Sbjct: 165 QHGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAA 224
Query: 223 VILLSNKRSLE-RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLP---- 277
+++ + E +F++ V T DS G E G FHL +P
Sbjct: 225 ALIVGSDPVPEIEKPIFEM---VWTAQTIAPDSEGAIDGHLREAGLT-FHLKGAVPDIVS 280
Query: 278 KAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCI 337
K T+A V+ + G++ + +
Sbjct: 281 KNITKALVEAFEPL---------------------------------GISDYNSI-FWIA 306
Query: 338 HTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV- 396
H GG A++D + L L + R L +GN S+A + ++L M KK + G +
Sbjct: 307 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR-KKSTQNGLKTT 365
Query: 397 -------LMISFGAGFKCNSCVWEVV 415
++ FG G + V V
Sbjct: 366 GEGLEWGVLFGFGPGLTIETVVLRSV 391
>pdb|3ROW|A Chain A, Crystal Structure Of Xanthomonas Campestri Olea
pdb|3ROW|B Chain B, Crystal Structure Of Xanthomonas Campestri Olea
pdb|3S1Z|A Chain A, Crystal Structure Of Acetamide Bound Xanthomonas Campestri
Olea
pdb|3S1Z|B Chain B, Crystal Structure Of Acetamide Bound Xanthomonas Campestri
Olea
pdb|3S20|A Chain A, Crystal Structure Of Cerulenin Bound Xanthomonas Campestri
Olea (Soak)
pdb|3S20|B Chain B, Crystal Structure Of Cerulenin Bound Xanthomonas Campestri
Olea (Soak)
Length = 344
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 332 VDHFCIHTGGKAVIDGIGFSLDLTEYDLEPAR-MTLH-RFGNTSAASLWYVLAYMEAKKR 389
+D F IH + + + ++PA+ MT+ GN AS+ VL+ ++ R
Sbjct: 265 LDQFVIHQVSRPHTAAF-----VKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGR 319
Query: 390 LKKGDRVLMISFGAGFKCN--SCVW 412
LKKGDR+ ++ G+G C+ VW
Sbjct: 320 LKKGDRIALLGIGSGLNCSMAEVVW 344
>pdb|3S21|A Chain A, Crystal Structure Of Cerulenin Bound Xanthomonas Campestri
Olea (Co- Crystal)
pdb|3S23|A Chain A, Crystal Structure Of Cerulenin Bound Xanthomonas Campestri
Olea (Co- Crystal) Xe Derivative
Length = 345
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 332 VDHFCIHTGGKAVIDGIGFSLDLTEYDLEPAR-MTLH-RFGNTSAASLWYVLAYMEAKKR 389
+D F IH + + + ++PA+ MT+ GN AS+ VL+ ++ R
Sbjct: 266 LDQFVIHQVSRPHTAAF-----VKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGR 320
Query: 390 LKKGDRVLMISFGAGFKCN--SCVW 412
LKKGDR+ ++ G+G C+ VW
Sbjct: 321 LKKGDRIALLGIGSGLNCSMAEVVW 345
>pdb|3FK5|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Synthase Iii, Fabh (Xoo4209) From Xanthomonas Oryzae Pv.
Oryzae Kacc10331
Length = 338
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 332 VDHFCIHTGGKAVIDGIGFSLDLTEYDLEPAR-MTLH-RFGNTSAASLWYVLAYMEAKKR 389
+D F IH + + + ++PA+ MT+ GN AS+ VL+ ++ R
Sbjct: 259 LDQFVIHQVSRPHTAAF-----VKSFGIDPAKVMTIFGEHGNIGPASVPIVLSKLKELGR 313
Query: 390 LKKGDRVLMISFGAGFKCN--SCVW 412
LKKGDR+ ++ G+G C+ VW
Sbjct: 314 LKKGDRIALLGIGSGLNCSMAEVVW 338
>pdb|3V7I|A Chain A, Germicidin Synthase (Gcs) From Streptomyces Coelicolor, A
Type Iii Polyketide Synthase
Length = 413
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 59/149 (39%)
Query: 104 DEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNL 163
+ ++ + E + L +G+ ++D L+ + S +P L + NR +R D +
Sbjct: 135 EAVQAYGERAARGALQIAGLDVADVDCLITSNSTTPALPGLDVALANRLPLRGDTMLLPA 194
Query: 164 TGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAV 223
T C A S+ + + + +VV SE+LS + +D L L + AV
Sbjct: 195 TQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTYQPADDTLESLIVRLLFADTAV 254
Query: 224 ILLSNKRSLERNALFKLKCLVRTHHGARD 252
+ R + L T G RD
Sbjct: 255 AAVVTGRPRPESVLRLDAAWHHTLPGTRD 283
>pdb|1ZOW|A Chain A, Crystal Structure Of S. Aureus Fabh, Beta-Ketoacyl Carrier
Protein Synthase Iii
pdb|1ZOW|B Chain B, Crystal Structure Of S. Aureus Fabh, Beta-Ketoacyl Carrier
Protein Synthase Iii
pdb|1ZOW|C Chain C, Crystal Structure Of S. Aureus Fabh, Beta-Ketoacyl Carrier
Protein Synthase Iii
pdb|1ZOW|D Chain D, Crystal Structure Of S. Aureus Fabh, Beta-Ketoacyl Carrier
Protein Synthase Iii
pdb|3IL7|A Chain A, Crystal Structure Of S. Aureus Fabh
pdb|3IL7|B Chain B, Crystal Structure Of S. Aureus Fabh
Length = 313
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 128/307 (41%), Gaps = 53/307 (17%)
Query: 101 DGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAI-MPSLSSRIINRYKMRKDIK 159
D D + +E S+ I D +GI P++ID+++V + + P++++ + R K
Sbjct: 47 DDQDTSDLAYEASVKAIAD-AGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTGKVAS 105
Query: 160 VFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRS 219
+ L CS + S+ + ++ N +VV ++ LS DRS + LF
Sbjct: 106 MDQLAA--CSGFMYSMITAKQYVQSGDYHNILVVGADKLS-KITDLTDRSTAV---LFGD 159
Query: 220 G-GAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPK 278
G GAVI+ G + G G G HL
Sbjct: 160 GAGAVII-----------------------GEVSEGRGIISYEMGSDGTGGKHL------ 190
Query: 279 AATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIH 338
++D + + + RE+ ++A VR M + + + +KA + +D F H
Sbjct: 191 -----YLD--KDTGKLKMNGREVFKFA----VRIMGDASTRVVEKANLT-SDDIDLFIPH 238
Query: 339 TGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLM 398
+++ L +++ + ++++++GNTSAAS+ + +LK D +++
Sbjct: 239 QANIRIMESARERLGISK---DKMSVSVNKYGNTSAASIPLSIDQELKNGKLKDDDTIVL 295
Query: 399 ISFGAGF 405
+ FG G
Sbjct: 296 VGFGGGL 302
>pdb|1D6H|A Chain A, Chalone Synthase (N336a Mutant Complexed With Coa)
Length = 387
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 119/326 (36%), Gaps = 54/326 (16%)
Query: 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLT 164
E+ +++ K + G +I L+V + MP ++ +R +K + +
Sbjct: 99 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY 158
Query: 165 GMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGA 222
G A + + + + + K +VV SE + + +D + ++ LF G A
Sbjct: 159 QQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAA 218
Query: 223 VILLSNKRSLE-RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLP---- 277
+++ + E +F+ +V T DS G E G FHL K++P
Sbjct: 219 ALIVGSDPVPEIEKPIFE---MVWTAQTIAPDSEGAIDGHLREAGL-TFHLLKDVPGIVS 274
Query: 278 KAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCI 337
K T+A V+ + G++ + +
Sbjct: 275 KNITKALVEAFEPL---------------------------------GISDYNSI-FWIA 300
Query: 338 HTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV- 396
H GG A++D + L L + R L +G S+A + ++L M KK + G +
Sbjct: 301 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGAMSSACVLFILDEMR-KKSTQNGLKTT 359
Query: 397 -------LMISFGAGFKCNSCVWEVV 415
++ FG G + V V
Sbjct: 360 GEGLEWGVLFGFGPGLTIETVVLRSV 385
>pdb|1D6I|A Chain A, Chalcone Synthase (H303q Mutant)
pdb|1D6I|B Chain B, Chalcone Synthase (H303q Mutant)
Length = 388
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/326 (19%), Positives = 119/326 (36%), Gaps = 54/326 (16%)
Query: 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLT 164
E+ +++ K + G +I L+V + MP ++ +R +K + +
Sbjct: 100 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY 159
Query: 165 GMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGA 222
G A + + + + + K +VV SE + + +D + ++ LF G A
Sbjct: 160 QQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAA 219
Query: 223 VILLSNKRSLE-RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLP---- 277
+++ + E +F+ +V T DS G E G FHL K++P
Sbjct: 220 ALIVGSDPVPEIEKPIFE---MVWTAQTIAPDSEGAIDGHLREAGLT-FHLLKDVPGIVS 275
Query: 278 KAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCI 337
K T+A V+ + G++ + +
Sbjct: 276 KNITKALVEAFEPL---------------------------------GISDYNSI-FWIA 301
Query: 338 HTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV- 396
GG A++D + L L + R L +GN S+A + ++L M KK + G +
Sbjct: 302 QPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR-KKSTQNGLKTT 360
Query: 397 -------LMISFGAGFKCNSCVWEVV 415
++ FG G + V V
Sbjct: 361 GEGLEWGVLFGFGPGLTIETVVLRSV 386
>pdb|1JWX|A Chain A, Chalcone Synthase--F215s Mutant
Length = 389
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 117/326 (35%), Gaps = 54/326 (16%)
Query: 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLT 164
E+ +++ K + G +I L+V + MP ++ +R +K + +
Sbjct: 101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMY 160
Query: 165 GMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSM--ILANCLFRSGGA 222
G A + + + + + K +VV SE + + +D + ++ L G A
Sbjct: 161 QQGXFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALSGDGAA 220
Query: 223 VILLSNKRSLE-RNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLP---- 277
+++ + E +F++ V T DS G E G FHL K++P
Sbjct: 221 ALIVGSDPVPEIEKPIFEM---VWTAQTIAPDSEGAIDGHLREAGLT-FHLLKDVPGIVS 276
Query: 278 KAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCI 337
K T+A V+ P G F +
Sbjct: 277 KNITKALVEAFE----------------------------PLGISDYNSIF------WIA 302
Query: 338 HTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV- 396
H GG A++D + L L + R L +GN S+A + ++L M KK + G +
Sbjct: 303 HPGGPAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMR-KKSTQNGLKTT 361
Query: 397 -------LMISFGAGFKCNSCVWEVV 415
++ FG G + V V
Sbjct: 362 GEGLEWGVLFGFGPGLTIETVVLRSV 387
>pdb|1XES|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|B Chain B, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|C Chain C, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XES|D Chain D, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris
pdb|1XET|A Chain A, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|B Chain B, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|C Chain C, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
pdb|1XET|D Chain D, Crystal Structure Of Stilbene Synthase From Pinus
Sylvestris, Complexed With Methylmalonyl Coa
Length = 413
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 337 IHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKG--- 393
+H GG+A++D + L+L L P R + +GN S+A + ++L K L+ G
Sbjct: 325 VHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTR-KASLQNGCST 383
Query: 394 -----DRVLMISFGAGFKCNSCVWEVV 415
+ ++ FG G + V + V
Sbjct: 384 TGEGLEMGVLFGFGPGLTIETVVLKSV 410
>pdb|1U0U|A Chain A, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|B Chain B, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|C Chain C, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|D Chain D, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|E Chain E, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
pdb|1U0U|F Chain F, An Aldol Switch Discovered In Stilbene Synthases Mediates
Cyclization Specificity Of Type Iii Polyketide
Synthases: Pine Stilbene Synthase Structure
Length = 397
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 337 IHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKG--- 393
+H GG+A++D + L+L L P R + +GN S+A + ++L K L+ G
Sbjct: 309 VHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTR-KASLQNGCST 367
Query: 394 -----DRVLMISFGAGFKCNSCVWEVV 415
+ ++ FG G + V + V
Sbjct: 368 TGEGLEMGVLFGFGPGLTIETVVLKSV 394
>pdb|3T5Y|B Chain B, Crystal Structure Of Cerj From Streptomyces Tendae -
Malonic Acid Covalently Linked To The Catalytic Cystein
C116
pdb|3T6S|A Chain A, Crystal Structure Of Cerj From Streptomyces Tendae In
Complex With Coa
pdb|3T8E|A Chain A, Crystal Structure Of Cerj From Streptomyces Tendae Soaked
With Cervik
pdb|3T8E|B Chain B, Crystal Structure Of Cerj From Streptomyces Tendae Soaked
With Cervik
Length = 357
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 370 GNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVR 416
G+ A + LA++ ++ GDRVL+ GAG+ C + V E++R
Sbjct: 294 GHVGAGDQYAGLAHLVENALVQPGDRVLLFGGGAGYTCTAAVVEILR 340
>pdb|1HNH|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii +
Degraded Form Of Acetyl-Coa
Length = 317
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 364 MTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCV 411
+TL R GNTSAAS+ L R+K G VL+ +FG GF S +
Sbjct: 267 VTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSAL 314
>pdb|3S3L|A Chain A, Crystal Structure Of Cerj From Streptomyces Tendae
pdb|3S3L|B Chain B, Crystal Structure Of Cerj From Streptomyces Tendae
pdb|3T5Y|A Chain A, Crystal Structure Of Cerj From Streptomyces Tendae -
Malonic Acid Covalently Linked To The Catalytic Cystein
C116
pdb|3T6S|B Chain B, Crystal Structure Of Cerj From Streptomyces Tendae In
Complex With Coa
Length = 357
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 370 GNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVR 416
G+ A + LA++ ++ GDRVL+ GAG+ C + V E++R
Sbjct: 294 GHVGAGDQYAGLAHLVENALVQPGDRVLLFGGGAGYTCTAAVVEILR 340
>pdb|1EBL|A Chain A, The 1.8 A Crystal Structure And Active Site Architecture
Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Iii
(Fabh) From Escherichia Coli
pdb|1EBL|B Chain B, The 1.8 A Crystal Structure And Active Site Architecture
Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Iii
(Fabh) From Escherichia Coli
Length = 317
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 364 MTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCV 411
+TL R GNTSAAS+ L R+K G VL+ +FG GF S +
Sbjct: 267 VTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSAL 314
>pdb|3IL9|A Chain A, Structure Of E. Coli Fabh
pdb|3IL9|B Chain B, Structure Of E. Coli Fabh
Length = 340
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 364 MTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCV 411
+TL R GNTSAAS+ L R+K G VL+ +FG GF S +
Sbjct: 290 VTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSAL 337
>pdb|3IL3|A Chain A, Structure Of Haemophilus Influenzae Fabh
Length = 323
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 122/298 (40%), Gaps = 51/298 (17%)
Query: 118 LDRSGISPKEIDILVV-NISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVD 176
++ + I+P++I++++V S PS + ++ + I F+L + + ++
Sbjct: 70 IEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNIDDAIS-FDLAA-AXTGFVYALS 127
Query: 177 IVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSG-GAVILLSNKRSLERN 235
+ + K A+V+ S+ L+ DRS ++ LF G GAVIL ++++
Sbjct: 128 VADQFIRAGKVKKALVIGSD-LNSRKLDETDRSTVV---LFGDGAGAVILEASEQ----- 178
Query: 236 ALFKLKCLVRTHHGARDDSYGCCVQTEDEQG--RPGFHLGKNLPKAATRAFVDNLRVISP 293
+ ++ TH A D V + E+G + G+ + F
Sbjct: 179 -----EGIISTHLHASADKNNALVLAQPERGIEKSGY-----IEMQGNETFK-------- 220
Query: 294 MILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLD 353
L +REL T ++NN K + +D H +I L
Sbjct: 221 --LAVRELSNVVEETL---LANNLDKKD----------LDWLVPHQANLRIITATAKKL- 264
Query: 354 LTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCV 411
E D+ +TL ++ N SAA++ L R+++G +L+ +FG G+ S +
Sbjct: 265 --EMDMSQVVVTLDKYANNSAATVPVALDEAIRDGRIQRGQLLLLEAFGGGWTWGSAL 320
>pdb|1MZS|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii With
Bound Dichlorobenzyloxy-Indole-Carboxylic Acid Inhibitor
Length = 317
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 364 MTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCV 411
+TL R GNTSAAS+ L R+K G VL+ +FG GF S +
Sbjct: 267 VTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSAL 314
>pdb|1HN9|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii
pdb|1HN9|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii
pdb|1HND|A Chain A, Crystal Structure Of Beta-ketoacyl-acp Synthase Iii-coa
Complex
pdb|1HNJ|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii +
Malonyl-Coa
pdb|1HNK|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acp Synthase Iii, Apo
Tetragonal Form
pdb|2EFT|A Chain A, Methanethiol-Cys 112 Inhibition Complex Of E. Coli
Ketoacyl Synthase Iii (Fabh) And Coenzyme A (High
Concentration (1.7mm) Soak)
pdb|2EFT|B Chain B, Methanethiol-Cys 112 Inhibition Complex Of E. Coli
Ketoacyl Synthase Iii (Fabh) And Coenzyme A (High
Concentration (1.7mm) Soak)
pdb|2GYO|A Chain A, Methanethiol-Cys 112 Inhibition Complex Of E. Coli
Ketoacyl Synthase Iii (Fabh) And Coenzyme A
pdb|2GYO|B Chain B, Methanethiol-Cys 112 Inhibition Complex Of E. Coli
Ketoacyl Synthase Iii (Fabh) And Coenzyme A
Length = 317
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 364 MTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCV 411
+TL R GNTSAAS+ L R+K G VL+ +FG GF S +
Sbjct: 267 VTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSAL 314
>pdb|2P0U|A Chain A, Crystal Structure Of Marchantia Polymorpha
Stilbenecarboxylate Synthase 2 (Stcs2)
pdb|2P0U|B Chain B, Crystal Structure Of Marchantia Polymorpha
Stilbenecarboxylate Synthase 2 (Stcs2)
Length = 413
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 335 FCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVL 381
+ +H GG A++D + L+L + + +R L +GN S+AS+ +VL
Sbjct: 318 WAVHPGGPAILDQVEAKLELEKGKFQASRDILSDYGNMSSASVLFVL 364
>pdb|3OV3|A Chain A, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|B Chain B, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|C Chain C, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
pdb|3OV3|D Chain D, G211f Mutant Of Curcumin Synthase 1 From Curcuma Longa
Length = 393
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 335 FCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKK----RL 390
+ H G A+ID I L L+ L AR +GN +A++++V+ + + R
Sbjct: 300 WVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRS 359
Query: 391 KKGDRV---LMISFGAGFKCNSCV 411
GD + +++ FG G + V
Sbjct: 360 TTGDGLQWGVLLGFGPGLSIETVV 383
>pdb|3OV2|A Chain A, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|B Chain B, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|C Chain C, Curcumin Synthase 1 From Curcuma Longa
pdb|3OV2|D Chain D, Curcumin Synthase 1 From Curcuma Longa
Length = 393
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 335 FCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKK----RL 390
+ H G A+ID I L L+ L AR +GN +A++++V+ + + R
Sbjct: 300 WVAHPGNWAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRS 359
Query: 391 KKGDRV---LMISFGAGFKCNSCV 411
GD + +++ FG G + V
Sbjct: 360 TTGDGLQWGVLLGFGPGLSIETVV 383
>pdb|2D3M|A Chain A, Pentaketide Chromone Synthase Complexed With Coenzyme A
pdb|2D3M|B Chain B, Pentaketide Chromone Synthase Complexed With Coenzyme A
Length = 406
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 338 HTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLK 391
H GG+A++D + L L AR L +GN +AS+ Y+L M K K
Sbjct: 319 HPGGRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAK 372
>pdb|2D51|A Chain A, Pentaketide Chromone Synthase (M207g Mutant)
pdb|2D51|B Chain B, Pentaketide Chromone Synthase (M207g Mutant)
pdb|2D52|A Chain A, Pentaketide Chromone Synthase (M207g Mutant Complexed With
Coa)
pdb|2D52|B Chain B, Pentaketide Chromone Synthase (M207g Mutant Complexed With
Coa)
Length = 406
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 338 HTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLK 391
H GG+A++D + L L AR L +GN +AS+ Y+L M K K
Sbjct: 319 HPGGRAILDQVEAKLKLRPEKFRAARTVLWDYGNMVSASVGYILDEMRRKSAAK 372
>pdb|3OIT|A Chain A, Crystal Structure Of Curcuminoid Synthase Cus From Oryza
Sativa
pdb|3OIT|B Chain B, Crystal Structure Of Curcuminoid Synthase Cus From Oryza
Sativa
Length = 387
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Query: 122 GISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSV 181
G +I LVV + A +P + R++ +R ++ L GC A ++ + + +
Sbjct: 112 GRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDL 171
Query: 182 FKTYKNMNAMVVTSESLSPNWYSGNDRS---MILANCLFRSGGAVILLSNKRSLERNALF 238
+ + +VV +E L+ +++G D +L LF G A +++ LF
Sbjct: 172 AENSRGARVLVVAAE-LTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADDVERPLF 230
Query: 239 KLKCLVRT 246
++ +T
Sbjct: 231 EIVSAAQT 238
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 335 FCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKG- 393
+ +H G ++D + +L L L +R L +GN S A++ + L + +++
Sbjct: 297 WAVHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQRKEAAAA 356
Query: 394 ----DRVLMISFGAGFKCNS 409
+ +M++FG G ++
Sbjct: 357 GEWPELGVMMAFGPGMTVDA 376
>pdb|3ALE|A Chain A, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|B Chain B, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|C Chain C, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
pdb|3ALE|D Chain D, A Type Iii Polyketide Synthase That Produces
Diarylheptanoid
Length = 416
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Query: 122 GISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSV 181
G +I LVV + A +P + R++ +R ++ L GC A ++ + + +
Sbjct: 142 GRPAADITHLVVTTNSGAHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDL 201
Query: 182 FKTYKNMNAMVVTSESLSPNWYSGNDRS---MILANCLFRSGGAVILLSNKRSLERNALF 238
+ + +VV +E L+ +++G D +L LF G A +++ LF
Sbjct: 202 AENSRGARVLVVAAE-LTLMYFTGPDEGCFRTLLVQGLFGDGAAAVIVGADADDVERPLF 260
Query: 239 KLKCLVRT 246
++ +T
Sbjct: 261 EIVSAAQT 268
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 335 FCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKG- 393
+ +H G ++D + +L L L +R L +GN S A++ + L + +++
Sbjct: 327 WAVHPGSSTIMDQVDAALGLEPGKLAASRRVLSDYGNMSGATVIFALDELRRQRKEAAAA 386
Query: 394 ----DRVLMISFGAGFKCNS 409
+ +M++FG G ++
Sbjct: 387 GEWPELGVMMAFGPGMTVDA 406
>pdb|2AJ9|A Chain A, X-Ray Crystal Structure Of W42a,R161a Double Mutant Of
Mycobacterium Tuberculosis Beta-Ketoacyl-Acp Synthase
Iii
pdb|2AJ9|B Chain B, X-Ray Crystal Structure Of W42a,R161a Double Mutant Of
Mycobacterium Tuberculosis Beta-Ketoacyl-Acp Synthase
Iii
Length = 356
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 366 LHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVR 416
+ GNTSAAS+ +A + K GD L+I +GAG S +VVR
Sbjct: 305 IEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGL---SYAAQVVR 352
>pdb|2AHB|A Chain A, X-Ray Crystal Structure Of R46a,R161a Mutant Of
Mycobacterium Tuberculosis Fabh
pdb|2AHB|B Chain B, X-Ray Crystal Structure Of R46a,R161a Mutant Of
Mycobacterium Tuberculosis Fabh
Length = 356
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 366 LHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVR 416
+ GNTSAAS+ +A + K GD L+I +GAG S +VVR
Sbjct: 305 IEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGL---SYAAQVVR 352
>pdb|1HZP|A Chain A, Crystal Structure Of The Myobacterium Tuberculosis
Beta-Ketoacyl-Acyl Carrier Protein Synthase Iii
pdb|1HZP|B Chain B, Crystal Structure Of The Myobacterium Tuberculosis
Beta-Ketoacyl-Acyl Carrier Protein Synthase Iii
pdb|2QX1|A Chain A, Crystal Structure Of The Complex Between Mycobacterium
Tuberculosis Beta-Ketoacyl-Acyl Carrier Protein Synthase
Iii (Fabh) And Decyl-Coa Disulfide
pdb|2QX1|B Chain B, Crystal Structure Of The Complex Between Mycobacterium
Tuberculosis Beta-Ketoacyl-Acyl Carrier Protein Synthase
Iii (Fabh) And Decyl-Coa Disulfide
pdb|2QNX|A Chain A, Crystal Structure Of The Complex Between The Mycobacterium
Beta- Ketoacyl-acyl Carrier Protein Synthase Iii (fabh)
And 11- [(decyloxycarbonyl)dithio]-undecanoic Acid
pdb|2QNX|B Chain B, Crystal Structure Of The Complex Between The Mycobacterium
Beta- Ketoacyl-acyl Carrier Protein Synthase Iii (fabh)
And 11- [(decyloxycarbonyl)dithio]-undecanoic Acid
pdb|2QNZ|A Chain A, Crystal Structure Of The Complex Between The Mycobacterium
Beta-Ketoacyl-Acyl Carrier Protein Synthase Iii (Fabh)
And Ss-(2-Hydroxyethyl)-O-Decyl Ester
Carbono(Dithioperoxoic) Acid
pdb|2QNZ|B Chain B, Crystal Structure Of The Complex Between The Mycobacterium
Beta-Ketoacyl-Acyl Carrier Protein Synthase Iii (Fabh)
And Ss-(2-Hydroxyethyl)-O-Decyl Ester
Carbono(Dithioperoxoic) Acid
pdb|2QO1|A Chain A, 2.6 Angstrom Crystal Structure Of The Complex Between 11-
(Decyldithiocarbonyloxy)-Undecanoic Acid And
Mycobacterium Tuberculosis Fabh.
pdb|2QO1|B Chain B, 2.6 Angstrom Crystal Structure Of The Complex Between 11-
(Decyldithiocarbonyloxy)-Undecanoic Acid And
Mycobacterium Tuberculosis Fabh
Length = 335
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 366 LHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVR 416
+ GNTSAAS+ +A + K GD L+I +GAG S +VVR
Sbjct: 284 IEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGL---SYAAQVVR 331
>pdb|1M1M|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis
Beta- Ketoacyl-Acyl Carrier Protein Synthase Iii
(Mtfabh)
pdb|1M1M|B Chain B, X-Ray Crystal Structure Of Mycobacterium Tuberculosis
Beta- Ketoacyl-Acyl Carrier Protein Synthase Iii
(Mtfabh)
Length = 355
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 366 LHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVR 416
+ GNTSAAS+ +A + K GD L+I +GAG S +VVR
Sbjct: 304 IEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGL---SYAAQVVR 351
>pdb|1U6S|A Chain A, Crystal Structure Of The Complex Between Mycobacterium
Tuberculosis Beta-ketoacyl-acyl Carrier Protein Synthase
Iii And Lauroyl Coenzyme A
pdb|1U6S|B Chain B, Crystal Structure Of The Complex Between Mycobacterium
Tuberculosis Beta-ketoacyl-acyl Carrier Protein Synthase
Iii And Lauroyl Coenzyme A
pdb|1U6E|A Chain A, 1.85 Angstrom Crystal Structure Of The C112a Mutant Of
Mycobacterium Tuberculosis Beta-Ketoacyl-Acyl Carrier
Protein Synthase Iii (Fabh)
pdb|1U6E|B Chain B, 1.85 Angstrom Crystal Structure Of The C112a Mutant Of
Mycobacterium Tuberculosis Beta-Ketoacyl-Acyl Carrier
Protein Synthase Iii (Fabh)
Length = 335
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 366 LHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVR 416
+ GNTSAAS+ +A + K GD L+I +GAG S +VVR
Sbjct: 284 IEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGL---SYAAQVVR 331
>pdb|2QNY|A Chain A, Crystal Structure Of The Complex Between The A246f Mutant
Of Mycobacterium Beta-Ketoacyl-Acyl Carrier Protein
Synthase Iii (Fabh) And Ss-(2-Hydroxyethyl) O-Decyl
Ester Carbono(Dithioperoxoic) Acid
pdb|2QNY|B Chain B, Crystal Structure Of The Complex Between The A246f Mutant
Of Mycobacterium Beta-Ketoacyl-Acyl Carrier Protein
Synthase Iii (Fabh) And Ss-(2-Hydroxyethyl) O-Decyl
Ester Carbono(Dithioperoxoic) Acid
pdb|2QO0|A Chain A, Crystal Structure Of The Complex Between The A246f Mutant
Of Mycobacterium Beta-Ketoacyl-Acyl Carrier Protein
Synthase Iii (Fabh) And 11-(Decyldithiocarbonyloxy)-
Undecanoic Acid
pdb|2QO0|B Chain B, Crystal Structure Of The Complex Between The A246f Mutant
Of Mycobacterium Beta-Ketoacyl-Acyl Carrier Protein
Synthase Iii (Fabh) And 11-(Decyldithiocarbonyloxy)-
Undecanoic Acid
Length = 335
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 366 LHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVR 416
+ GNTSAAS+ +A + K GD L+I +GAG S +VVR
Sbjct: 284 IEHTGNTSAASIPLAMAELLTTGAAKPGDLALLIGYGAGL---SYAAQVVR 331
>pdb|4DFE|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Synthase Iii From Burkholderia Xenovorans
pdb|4DFE|B Chain B, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Synthase Iii From Burkholderia Xenovorans
pdb|4DFE|C Chain C, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Synthase Iii From Burkholderia Xenovorans
pdb|4DFE|D Chain D, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Synthase Iii From Burkholderia Xenovorans
Length = 333
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 364 MTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCV 411
+T+ GNTSAAS+ L R+K+G VL+ G GF + V
Sbjct: 283 VTVGEHGNTSAASIPLALDVAVRDGRIKRGQNVLIEGVGGGFTWGASV 330
>pdb|3IL4|A Chain A, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa
pdb|3IL4|B Chain B, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa
pdb|3IL4|C Chain C, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa
pdb|3IL4|D Chain D, Structure Of E. Faecalis Fabh In Complex With Acetyl Coa
Length = 320
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 332 VDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVL--AYMEAKKR 389
VD+ +H +ID I T+ E + ++GNTSAAS+ +L A
Sbjct: 239 VDYLLLHQASVRIIDKIARK---TKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLI 295
Query: 390 LKKGDRVLMISFGAGFKCNSCV 411
L RV++ FG G S +
Sbjct: 296 LGSQQRVVLTGFGGGLTWGSLL 317
>pdb|4DPK|A Chain A, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota
pdb|4DPK|B Chain B, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota
pdb|4DPK|C Chain C, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota
pdb|4DPK|D Chain D, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota
pdb|4DPM|A Chain A, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Coa
pdb|4DPM|B Chain B, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Coa
pdb|4DPM|C Chain C, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Coa
pdb|4DPM|D Chain D, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Coa
pdb|4DPM|E Chain E, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Coa
pdb|4DPM|F Chain F, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Coa
pdb|4DPL|A Chain A, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Nadp
pdb|4DPL|B Chain B, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Nadp
pdb|4DPL|C Chain C, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Nadp
pdb|4DPL|D Chain D, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Nadp
Length = 359
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 13/123 (10%)
Query: 140 IMPSLSSR---IINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSE 196
++P L+ +I+ + R++ K F +T C+A ++ + ++FK YK A + T +
Sbjct: 122 LVPELNPHTISLIDEQRKRREWKGFIVTTPLCTAQGAAIPL-GAIFKDYKMDGAFITTIQ 180
Query: 197 SLSPNWYSGNDRSMILANCLFRSGGA---------VILLSNKRSLERNALFKLKCLVRTH 247
SLS Y G ++ N L G IL KR+++ L + TH
Sbjct: 181 SLSGAGYPGIPSLDVVDNILPLGDGYDAKTIKEIFRILSEVKRNVDEPKLEDVSLAATTH 240
Query: 248 HGA 250
A
Sbjct: 241 RIA 243
>pdb|3IL6|A Chain A, Structure Of E. Faecalis Fabh In Complex With 2-({4-[(3r,
5s)-3,5-Dimethylpiperidin-1-Yl]-3-Phenoxybenzoyl}amino)
Benzoic Acid
Length = 321
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 332 VDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVL--AYMEAKKR 389
VD+ +H +ID I T+ E + ++GNTSAAS+ +L A
Sbjct: 240 VDYLLLHQANVRIIDKIARK---TKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLI 296
Query: 390 LKKGDRVLMISFGAGFKCNSCV 411
L RV++ FG G S +
Sbjct: 297 LGSQQRVVLTGFGGGLTWGSLL 318
>pdb|3E7W|A Chain A, Crystal Structure Of Dlta: Implications For The Reaction
Mechanism Of Non-Ribosomal Peptide Synthetase (Nrps)
Adenylation Domains
pdb|3E7X|A Chain A, Crystal Structure Of Dlta: Implications For The Reaction
Mechanism Of Non-Ribosomal Peptide Synthetase (Nrps)
Adenylation Domains
Length = 511
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 314 SNNTPKGEKKAGVNFRTGVDHFCIH---TGGKAVIDGIGFSLDLTEYDLEPARM---TLH 367
S PKG + + N ++ D C +GGK ++ FS DL+ DL P TLH
Sbjct: 154 STGNPKGVQISAANLQSFTDWICADFPVSGGKIFLNQAPFSFDLSVMDLYPCLQSGGTLH 213
>pdb|2X3E|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Synthase Iii, Fabh From Pseudomonas Aeruginosa Pao1
pdb|2X3E|B Chain B, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Synthase Iii, Fabh From Pseudomonas Aeruginosa Pao1
Length = 331
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 334 HFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKG 393
H H ++ + LDL +E + GNT AAS+ LA+ + L+ G
Sbjct: 246 HLVPHQANTRILAAVADQLDLP---VERVVSNIAEVGNTVAASIPLALAHGLRQGILRDG 302
Query: 394 DRVLMISFGAGFKCNS 409
+++ FGAG S
Sbjct: 303 GNMVLTGFGAGLTWGS 318
>pdb|3IL5|A Chain A, Structure Of E. Faecalis Fabh In Complex With
2-({4-Bromo-3-
[(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid
pdb|3IL5|B Chain B, Structure Of E. Faecalis Fabh In Complex With
2-({4-Bromo-3-
[(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid
pdb|3IL5|C Chain C, Structure Of E. Faecalis Fabh In Complex With
2-({4-Bromo-3-
[(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid
pdb|3IL5|D Chain D, Structure Of E. Faecalis Fabh In Complex With
2-({4-Bromo-3-
[(Diethylamino)sulfonyl]benzoyl}amino)benzoic Acid
Length = 343
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 332 VDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVL--AYMEAKKR 389
VD+ +H +ID I T+ E + ++GNTSAAS+ +L A
Sbjct: 260 VDYLLLHQANVRIIDKIARK---TKISREKFLTNMDKYGNTSAASIPILLDEAVENGTLI 316
Query: 390 LKKGDRVLMISFGAGFKCNSCV 411
L RV++ FG G S +
Sbjct: 317 LGSQQRVVLTGFGGGLTWGSLL 338
>pdb|3E1H|A Chain A, Crystal Structure Of A Type Iii Polyketide Synthase
Pksiiinc From Neurospora Crassa
pdb|3E1H|B Chain B, Crystal Structure Of A Type Iii Polyketide Synthase
Pksiiinc From Neurospora Crassa
Length = 465
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 335 FCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRF---GNTSAASLWYVLAYMEAK--KR 389
+ +H GG ++ G ++ LT E R + R+ GN+S+A+++ VL + K
Sbjct: 322 WAMHPGGATILSGAESAMGLTP---EHMRASYDRYINHGNSSSATIFSVLNRLREKDMDA 378
Query: 390 LKKGDR----VLMISFGAGFKCNSCV 411
L G + V+ +FG G C+
Sbjct: 379 LAPGGKVKEYVVGCAFGPGINVEMCM 404
>pdb|3EUO|A Chain A, Crystal Structure Of A Fungal Type Iii Polyketide
Synthase, Oras
pdb|3EUO|B Chain B, Crystal Structure Of A Fungal Type Iii Polyketide
Synthase, Oras
pdb|3EUT|A Chain A, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|B Chain B, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|C Chain C, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
pdb|3EUT|D Chain D, X-Ray Crystal Structure Of A Type Iii Pentaketide Synthase
From Neurospora Crassa
Length = 379
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 335 FCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRF---GNTSAASLWYVLAYMEAK--KR 389
+ +H GG ++ G ++ LT E R + R+ GN+S+A+++ VL + K
Sbjct: 293 WAMHPGGATILSGAESAMGLTP---EHMRASYDRYINHGNSSSATIFSVLNRLREKDMDA 349
Query: 390 LKKGDR----VLMISFGAGFKCNSCV 411
L G + V+ +FG G C+
Sbjct: 350 LAPGGKVKEYVVGCAFGPGINVEMCM 375
>pdb|3EUQ|A Chain A, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|B Chain B, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|C Chain C, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
pdb|3EUQ|D Chain D, X-Ray Structural Of A Type Iii Pentaketide Synthase From
Neurospora Crassa
Length = 379
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 335 FCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRF---GNTSAASLWYVLAYMEAK--KR 389
+ +H GG ++ G ++ LT E R + R+ GN+S+A+++ VL + K
Sbjct: 293 WAMHPGGATILSGAESAMGLTP---EHMRASYDRYINHGNSSSATIFSVLNRLREKDMDA 349
Query: 390 LKKGDR----VLMISFGAGFKCNSCV 411
L G + V+ +FG G C+
Sbjct: 350 LAPGGKVKEYVVGCAFGPGINVEMCM 375
>pdb|3O31|A Chain A, E81q Mutant Of Mtnas In Complex With A Reaction
Intermediate
pdb|3O31|B Chain B, E81q Mutant Of Mtnas In Complex With A Reaction
Intermediate
Length = 296
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 331 GVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMT---LHRFGNTSAASLWYVLAYMEA 386
GVD + TG + VIDG+ F + + EP R +HR+ +T ++ M A
Sbjct: 169 GVDGVNVITGDETVIDGLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYTGMRA 227
>pdb|3FPE|A Chain A, Crystal Structure Of Mtnas In Complex With
Thermonicotianamine
pdb|3FPE|B Chain B, Crystal Structure Of Mtnas In Complex With
Thermonicotianamine
pdb|3FPF|A Chain A, Crystal Structure Of Mtnas In Complex With Mta And Tna
pdb|3FPF|B Chain B, Crystal Structure Of Mtnas In Complex With Mta And Tna
Length = 298
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 331 GVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMT---LHRFGNTSAASLWYVLAYMEA 386
GVD + TG + VIDG+ F + + EP R +HR+ +T ++ M A
Sbjct: 170 GVDGVNVITGDETVIDGLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYTGMRA 228
>pdb|3FPG|A Chain A, Crystal Structure Of E81q Mutant Of Mtnas
pdb|3FPG|B Chain B, Crystal Structure Of E81q Mutant Of Mtnas
pdb|3FPH|A Chain A, Crystal Structure Of E81q Mutant Of Mtnas In Complex With
L-Glutamate
pdb|3FPH|B Chain B, Crystal Structure Of E81q Mutant Of Mtnas In Complex With
L-Glutamate
pdb|3FPJ|A Chain A, Crystal Structure Of E81q Mutant Of Mtnas In Complex With
S- Adenosylmethionine
pdb|3FPJ|B Chain B, Crystal Structure Of E81q Mutant Of Mtnas In Complex With
S- Adenosylmethionine
Length = 298
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 331 GVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMT---LHRFGNTSAASLWYVLAYMEA 386
GVD + TG + VIDG+ F + + EP R +HR+ +T ++ M A
Sbjct: 170 GVDGVNVITGDETVIDGLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTYTGMRA 228
>pdb|1ET0|A Chain A, Crystal Structure Of Aminodeoxychorismate Lyase From
Escherichia Coli
pdb|1I2K|A Chain A, Aminodeoxychorismate Lyase From Escherichia Coli
pdb|1I2L|A Chain A, Deoxychorismate Lyase From Escherichia Coli With
Inhibitor
Length = 269
Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 46 MVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYS 85
M+S DF Q+ + K L + +LK ++S G G + YS
Sbjct: 54 MISCDFWPQLEQEMKTLAAEQQNGVLKVVISRGSGGRGYS 93
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,641,304
Number of Sequences: 62578
Number of extensions: 561409
Number of successful extensions: 1480
Number of sequences better than 100.0: 72
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1399
Number of HSP's gapped (non-prelim): 98
length of query: 465
length of database: 14,973,337
effective HSP length: 102
effective length of query: 363
effective length of database: 8,590,381
effective search space: 3118308303
effective search space used: 3118308303
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)