Query 039047
Match_columns 465
No_of_seqs 272 out of 2442
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 05:49:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039047.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039047hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02854 3-ketoacyl-CoA syntha 100.0 9.5E-96 2E-100 765.1 42.7 427 4-438 90-518 (521)
2 PLN02192 3-ketoacyl-CoA syntha 100.0 1.6E-96 3E-101 769.5 34.6 431 5-445 79-510 (511)
3 PLN02932 3-ketoacyl-CoA syntha 100.0 3.9E-96 8E-101 764.2 36.6 426 5-438 45-476 (478)
4 PLN02377 3-ketoacyl-CoA syntha 100.0 2.6E-93 5.6E-98 747.0 41.6 425 4-435 74-498 (502)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 1.7E-92 3.6E-97 728.7 39.6 422 7-435 39-463 (466)
6 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 3.4E-69 7.4E-74 523.1 26.7 286 26-312 4-289 (290)
7 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 3.6E-56 7.8E-61 442.9 23.8 320 29-414 2-322 (323)
8 PLN03172 chalcone synthase fam 100.0 8.7E-52 1.9E-56 426.7 34.6 350 28-415 14-387 (393)
9 cd00831 CHS_like Chalcone and 100.0 1.8E-51 3.9E-56 421.9 31.5 346 30-412 1-361 (361)
10 PLN03173 chalcone synthase; Pr 100.0 9.8E-51 2.1E-55 418.6 32.2 352 27-416 13-388 (391)
11 PLN03168 chalcone synthase; Pr 100.0 1.3E-50 2.7E-55 418.1 32.5 352 27-417 12-388 (389)
12 PLN03169 chalcone synthase fam 100.0 2.1E-50 4.5E-55 417.2 32.2 350 26-415 17-389 (391)
13 PLN03170 chalcone synthase; Pr 100.0 1E-49 2.2E-54 412.6 30.6 352 29-417 19-393 (401)
14 PLN03171 chalcone synthase-lik 100.0 6.9E-49 1.5E-53 406.6 32.3 357 27-417 19-397 (399)
15 COG3424 BcsA Predicted naringe 100.0 2.5E-49 5.4E-54 379.1 26.5 347 31-416 2-354 (356)
16 PRK12880 3-oxoacyl-(acyl carri 100.0 1.6E-48 3.4E-53 398.4 27.7 334 27-414 4-338 (353)
17 PRK05963 3-oxoacyl-(acyl carri 100.0 6.4E-48 1.4E-52 390.1 28.4 323 30-414 3-326 (326)
18 PLN02326 3-oxoacyl-[acyl-carri 100.0 1.4E-47 3.1E-52 395.3 26.6 330 29-414 46-379 (379)
19 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 6.3E-47 1.4E-51 383.1 26.5 323 30-414 2-325 (326)
20 PRK12879 3-oxoacyl-(acyl carri 100.0 8.2E-46 1.8E-50 374.2 29.3 318 29-414 3-324 (325)
21 PRK07204 3-oxoacyl-(acyl carri 100.0 1.1E-45 2.4E-50 374.3 28.4 322 29-414 3-329 (329)
22 PRK09258 3-oxoacyl-(acyl carri 100.0 3.3E-45 7.1E-50 372.1 27.4 320 28-414 3-338 (338)
23 PRK06840 hypothetical protein; 100.0 2E-43 4.3E-48 359.3 30.4 323 28-414 2-335 (339)
24 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 7.8E-44 1.7E-48 358.9 26.8 310 30-414 2-318 (318)
25 cd00830 KAS_III Ketoacyl-acyl 100.0 6.8E-44 1.5E-48 359.0 25.3 316 30-412 1-320 (320)
26 PRK09352 3-oxoacyl-(acyl carri 100.0 9.8E-43 2.1E-47 350.9 28.2 313 29-414 2-318 (319)
27 PRK06816 3-oxoacyl-(acyl carri 100.0 3.6E-42 7.7E-47 355.1 31.1 345 30-415 2-378 (378)
28 PRK04262 hypothetical protein; 100.0 2E-42 4.3E-47 353.2 24.7 315 30-427 2-319 (347)
29 PRK07515 3-oxoacyl-(acyl carri 100.0 1.9E-41 4.1E-46 349.1 27.4 350 29-414 1-371 (372)
30 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 8.3E-42 1.8E-46 348.2 22.7 317 30-427 1-318 (345)
31 cd00827 init_cond_enzymes "ini 100.0 1.6E-39 3.5E-44 327.7 23.9 316 30-412 1-324 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 5.1E-36 1.1E-40 309.1 27.5 307 31-415 1-318 (379)
33 PLN02577 hydroxymethylglutaryl 100.0 5.9E-34 1.3E-38 297.0 26.1 316 27-417 1-373 (459)
34 COG3425 PksG 3-hydroxy-3-methy 100.0 6.1E-32 1.3E-36 270.3 23.0 315 29-420 1-316 (377)
35 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 6.5E-31 1.4E-35 273.8 24.8 319 30-417 1-376 (454)
36 PF00195 Chal_sti_synt_N: Chal 100.0 6.3E-32 1.4E-36 256.3 15.5 203 26-230 10-226 (226)
37 cd00327 cond_enzymes Condensin 100.0 4.1E-28 8.8E-33 235.9 15.2 235 106-412 7-254 (254)
38 cd00825 decarbox_cond_enzymes 99.9 1.4E-25 3E-30 226.8 14.6 252 106-412 11-332 (332)
39 PF02797 Chal_sti_synt_C: Chal 99.8 1.3E-20 2.9E-25 169.3 11.5 127 258-415 17-150 (151)
40 PF08541 ACP_syn_III_C: 3-Oxoa 99.8 4.1E-21 9E-26 158.1 6.7 89 320-414 2-90 (90)
41 KOG1393 Hydroxymethylglutaryl- 99.8 1.2E-17 2.5E-22 164.9 19.6 326 25-419 6-381 (462)
42 PF01154 HMG_CoA_synt_N: Hydro 99.8 6.3E-18 1.4E-22 153.5 11.8 166 27-230 1-173 (174)
43 TIGR02845 spore_V_AD stage V s 99.7 3.4E-16 7.4E-21 154.9 20.7 116 106-231 50-173 (327)
44 PRK06147 3-oxoacyl-(acyl carri 99.7 2.1E-16 4.5E-21 161.6 19.7 311 29-414 3-342 (348)
45 PRK08304 stage V sporulation p 99.6 8.4E-14 1.8E-18 138.3 19.4 117 106-231 56-179 (337)
46 cd00834 KAS_I_II Beta-ketoacyl 99.6 2.1E-13 4.6E-18 141.8 21.1 185 29-231 1-243 (406)
47 cd00751 thiolase Thiolase are 99.5 3.4E-13 7.5E-18 139.9 19.2 95 105-200 21-116 (386)
48 PRK09051 beta-ketothiolase; Pr 99.5 2.8E-12 6E-17 133.3 20.2 95 105-200 26-122 (394)
49 PRK05656 acetyl-CoA acetyltran 99.5 3E-12 6.4E-17 133.1 20.2 95 105-200 25-120 (393)
50 smart00825 PKS_KS Beta-ketoacy 99.5 6.4E-12 1.4E-16 131.7 22.8 122 105-231 86-247 (424)
51 TIGR01930 AcCoA-C-Actrans acet 99.5 2.2E-12 4.8E-17 133.8 18.0 95 105-200 20-115 (386)
52 PRK09052 acetyl-CoA acetyltran 99.4 5.7E-12 1.2E-16 131.1 19.8 95 105-200 30-127 (399)
53 PRK06064 acetyl-CoA acetyltran 99.4 1.5E-11 3.3E-16 127.7 21.4 94 105-200 21-117 (389)
54 PRK06025 acetyl-CoA acetyltran 99.4 1.5E-11 3.3E-16 127.6 19.7 95 105-200 28-124 (417)
55 PRK07108 acetyl-CoA acetyltran 99.4 1E-11 2.3E-16 128.9 18.4 95 105-200 26-122 (392)
56 cd00828 elong_cond_enzymes "el 99.4 2.5E-11 5.4E-16 126.6 21.4 124 104-231 70-243 (407)
57 PRK08313 acetyl-CoA acetyltran 99.4 2.2E-11 4.8E-16 126.3 20.8 93 105-199 23-117 (386)
58 cd00829 SCP-x_thiolase Thiolas 99.4 2.6E-11 5.6E-16 125.2 20.6 94 105-200 15-109 (375)
59 PRK08242 acetyl-CoA acetyltran 99.4 3.5E-11 7.6E-16 125.1 20.7 95 105-200 27-123 (402)
60 PF08545 ACP_syn_III: 3-Oxoacy 99.4 5.8E-13 1.3E-17 107.2 5.3 79 161-251 1-79 (80)
61 PRK12404 stage V sporulation p 99.4 6.6E-11 1.4E-15 117.2 20.4 117 105-230 53-176 (334)
62 PRK05790 putative acyltransfer 99.3 8.3E-11 1.8E-15 122.4 20.7 94 105-199 25-119 (393)
63 TIGR03150 fabF beta-ketoacyl-a 99.3 1.8E-10 3.9E-15 120.1 23.2 187 29-231 1-243 (407)
64 cd00833 PKS polyketide synthas 99.3 1.2E-10 2.6E-15 121.7 21.8 122 104-231 85-247 (421)
65 PRK06954 acetyl-CoA acetyltran 99.3 5.2E-11 1.1E-15 124.0 18.9 95 105-200 30-125 (397)
66 PRK06501 3-oxoacyl-(acyl carri 99.3 3E-10 6.5E-15 119.4 24.7 182 30-231 12-257 (425)
67 PRK07661 acetyl-CoA acetyltran 99.3 1.5E-10 3.3E-15 120.2 20.5 94 106-200 27-122 (391)
68 PRK07314 3-oxoacyl-(acyl carri 99.3 4.5E-10 9.8E-15 117.4 23.6 186 29-231 2-244 (411)
69 PRK06445 acetyl-CoA acetyltran 99.3 2E-10 4.4E-15 119.5 20.2 91 106-199 32-126 (394)
70 PRK06690 acetyl-CoA acetyltran 99.3 2.9E-10 6.3E-15 116.7 19.8 244 105-414 24-359 (361)
71 PLN02287 3-ketoacyl-CoA thiola 99.2 6.4E-10 1.4E-14 117.4 20.6 95 105-200 70-166 (452)
72 PRK06333 3-oxoacyl-(acyl carri 99.2 9.3E-10 2E-14 115.6 21.6 188 29-231 4-256 (424)
73 PLN02644 acetyl-CoA C-acetyltr 99.2 8.7E-10 1.9E-14 114.8 20.1 93 106-199 25-118 (394)
74 PRK06158 thiolase; Provisional 99.2 1.3E-09 2.9E-14 113.0 21.3 89 105-198 27-116 (384)
75 PRK07103 polyketide beta-ketoa 99.2 2.2E-09 4.7E-14 112.4 21.4 122 105-231 79-251 (410)
76 PRK08256 lipid-transfer protei 99.2 2E-09 4.2E-14 112.1 20.5 90 106-199 22-111 (391)
77 PRK07850 acetyl-CoA acetyltran 99.2 2.4E-09 5.1E-14 111.2 21.0 94 106-200 26-121 (387)
78 PRK06633 acetyl-CoA acetyltran 99.2 1.2E-09 2.6E-14 113.5 18.2 95 105-200 26-121 (392)
79 PRK06504 acetyl-CoA acetyltran 99.2 3.4E-09 7.4E-14 110.0 21.0 95 105-200 25-121 (390)
80 PRK08722 3-oxoacyl-(acyl carri 99.1 1.9E-08 4.2E-13 105.3 26.5 187 29-231 4-246 (414)
81 PRK09116 3-oxoacyl-(acyl carri 99.1 4.5E-09 9.8E-14 109.8 20.8 190 29-231 2-245 (405)
82 PRK08439 3-oxoacyl-(acyl carri 99.1 3.4E-08 7.5E-13 103.3 26.7 187 29-231 2-244 (406)
83 PRK05952 3-oxoacyl-(acyl carri 99.1 1.2E-08 2.6E-13 105.7 22.7 299 29-413 2-380 (381)
84 PRK06205 acetyl-CoA acetyltran 99.1 3.7E-10 8E-15 117.9 10.2 95 105-200 25-120 (404)
85 PRK08235 acetyl-CoA acetyltran 99.1 4.6E-10 1E-14 116.7 10.7 95 105-200 25-120 (393)
86 PRK07801 acetyl-CoA acetyltran 99.1 8.3E-09 1.8E-13 107.0 18.9 94 105-199 25-120 (382)
87 PTZ00050 3-oxoacyl-acyl carrie 99.0 1.9E-08 4.2E-13 105.6 20.4 251 105-413 76-419 (421)
88 cd00832 CLF Chain-length facto 99.0 3.8E-08 8.3E-13 102.7 21.9 188 29-232 1-242 (399)
89 PRK12578 acetyl-CoA acetyltran 99.0 1.5E-09 3.3E-14 112.7 10.9 93 106-200 21-114 (385)
90 PLN02787 3-oxoacyl-[acyl-carri 99.0 8.3E-08 1.8E-12 103.4 24.4 189 29-231 129-373 (540)
91 PRK06059 lipid-transfer protei 99.0 1.4E-09 3E-14 113.4 10.5 93 106-200 23-117 (399)
92 PRK08170 acetyl-CoA acetyltran 99.0 2.1E-09 4.5E-14 113.0 11.0 95 105-200 26-121 (426)
93 PLN02836 3-oxoacyl-[acyl-carri 99.0 1.1E-07 2.5E-12 100.3 24.1 122 105-231 92-267 (437)
94 PF00108 Thiolase_N: Thiolase, 99.0 2.7E-09 5.8E-14 105.2 10.7 95 105-200 25-120 (264)
95 PRK09185 3-oxoacyl-(acyl carri 99.0 9.9E-08 2.1E-12 99.4 22.8 206 142-414 137-390 (392)
96 PRK06519 3-oxoacyl-(acyl carri 99.0 2.7E-07 5.9E-12 96.1 25.9 188 26-232 3-256 (398)
97 PRK06065 acetyl-CoA acetyltran 98.9 4.3E-09 9.4E-14 109.3 10.9 91 106-198 29-121 (392)
98 PRK07910 3-oxoacyl-(acyl carri 98.9 3E-07 6.4E-12 96.6 24.7 318 28-413 11-416 (418)
99 cd00826 nondecarbox_cond_enzym 98.9 5.1E-09 1.1E-13 109.0 10.9 94 105-200 22-117 (393)
100 PRK08257 acetyl-CoA acetyltran 98.9 2.2E-07 4.9E-12 99.4 22.9 92 105-198 26-119 (498)
101 PRK07967 3-oxoacyl-(acyl carri 98.9 1.8E-07 3.9E-12 97.8 21.1 188 29-231 2-244 (406)
102 PRK08963 fadI 3-ketoacyl-CoA t 98.8 1.2E-08 2.6E-13 107.3 10.4 95 105-200 28-123 (428)
103 PRK13359 beta-ketoadipyl CoA t 98.8 1.9E-08 4.1E-13 104.8 11.2 95 105-200 25-122 (400)
104 PRK14691 3-oxoacyl-(acyl carri 98.8 2.8E-07 6.1E-12 94.1 19.2 121 106-231 4-174 (342)
105 PRK07851 acetyl-CoA acetyltran 98.8 2.7E-08 5.9E-13 103.9 10.8 93 106-200 27-122 (406)
106 PRK08131 acetyl-CoA acetyltran 98.8 3.2E-08 6.9E-13 103.2 11.2 95 105-200 25-121 (401)
107 PRK09050 beta-ketoadipyl CoA t 98.8 2.8E-08 6.1E-13 103.6 10.6 95 105-200 25-122 (401)
108 PRK07516 acetyl-CoA acetyltran 98.8 3.2E-08 7E-13 102.9 10.6 93 106-200 22-117 (389)
109 TIGR02446 FadI fatty oxidation 98.7 3.4E-08 7.3E-13 103.9 10.0 95 105-200 30-125 (430)
110 TIGR02430 pcaF beta-ketoadipyl 98.7 4.4E-08 9.5E-13 102.1 10.7 95 105-200 24-121 (400)
111 PRK06366 acetyl-CoA acetyltran 98.7 4.6E-08 1E-12 101.7 10.8 95 105-200 25-120 (388)
112 PRK06289 acetyl-CoA acetyltran 98.7 4.1E-08 8.8E-13 102.6 9.9 91 106-200 26-122 (403)
113 PF00109 ketoacyl-synt: Beta-k 98.7 5.3E-08 1.1E-12 94.8 9.1 189 29-229 2-251 (254)
114 PTZ00455 3-ketoacyl-CoA thiola 98.7 1.3E-07 2.9E-12 99.6 11.3 95 105-200 47-152 (438)
115 PRK06157 acetyl-CoA acetyltran 98.6 1.3E-07 2.9E-12 98.5 10.8 93 106-200 27-120 (398)
116 PRK08947 fadA 3-ketoacyl-CoA t 98.6 1.1E-07 2.4E-12 98.8 10.0 95 105-200 26-123 (387)
117 TIGR02813 omega_3_PfaA polyket 98.6 4.9E-06 1.1E-10 103.1 23.9 215 144-416 185-463 (2582)
118 TIGR02445 fadA fatty oxidation 98.6 1.6E-07 3.4E-12 97.6 9.2 95 105-200 24-121 (385)
119 PRK06365 acetyl-CoA acetyltran 98.6 2.2E-07 4.7E-12 97.9 10.3 93 106-200 37-131 (430)
120 PRK09268 acetyl-CoA acetyltran 98.6 3.2E-07 6.9E-12 96.5 10.9 95 105-200 30-125 (427)
121 PF07451 SpoVAD: Stage V sporu 98.4 4.7E-06 1E-10 81.8 14.6 120 104-232 49-175 (329)
122 KOG1389 3-oxoacyl CoA thiolase 98.4 3E-06 6.5E-11 82.9 11.9 95 106-201 61-156 (435)
123 PRK07937 lipid-transfer protei 98.4 2.9E-05 6.2E-10 79.8 19.6 89 107-199 25-114 (352)
124 COG0304 FabB 3-oxoacyl-(acyl-c 98.3 7.6E-05 1.7E-09 77.9 20.5 122 104-232 69-245 (412)
125 PRK08142 acetyl-CoA acetyltran 98.3 2.7E-06 5.9E-11 88.4 9.6 88 106-198 25-112 (388)
126 PRK07855 lipid-transfer protei 98.1 9.8E-06 2.1E-10 84.3 10.0 85 106-195 24-108 (386)
127 COG3321 Polyketide synthase mo 98.1 0.00014 3E-09 84.6 18.4 191 29-230 4-250 (1061)
128 PRK06066 acetyl-CoA acetyltran 98.0 3.4E-05 7.3E-10 80.1 10.3 89 106-199 25-116 (385)
129 KOG1390 Acetyl-CoA acetyltrans 97.9 3E-05 6.5E-10 76.3 7.1 95 105-200 29-124 (396)
130 COG0183 PaaJ Acetyl-CoA acetyl 97.9 5.8E-05 1.3E-09 78.7 9.4 95 106-201 27-125 (392)
131 PF08540 HMG_CoA_synt_C: Hydro 97.6 0.00035 7.7E-09 69.3 9.4 62 358-419 143-206 (282)
132 KOG1394 3-oxoacyl-(acyl-carrie 97.5 0.00081 1.8E-08 67.5 11.5 122 104-232 92-270 (440)
133 KOG1406 Peroxisomal 3-ketoacyl 97.5 0.00012 2.5E-09 70.5 4.9 89 107-200 30-119 (408)
134 KOG1391 Acetyl-CoA acetyltrans 96.6 0.0032 7E-08 60.6 5.6 92 106-200 28-123 (396)
135 KOG1392 Acetyl-CoA acetyltrans 96.1 0.0054 1.2E-07 59.9 4.0 94 106-200 66-160 (465)
136 PF08541 ACP_syn_III_C: 3-Oxoa 95.3 0.03 6.4E-07 45.6 4.7 75 118-196 1-78 (90)
137 TIGR00748 HMG_CoA_syn_Arc hydr 94.3 0.17 3.8E-06 51.8 8.5 83 106-194 206-293 (345)
138 PRK06816 3-oxoacyl-(acyl carri 93.8 0.32 6.9E-06 50.5 9.3 89 106-198 270-366 (378)
139 PRK06025 acetyl-CoA acetyltran 93.5 0.23 5E-06 52.2 7.8 91 111-228 318-416 (417)
140 PRK09258 3-oxoacyl-(acyl carri 93.4 0.28 6.2E-06 49.7 8.2 90 104-197 235-327 (338)
141 PF13723 Ketoacyl-synt_2: Beta 93.3 1.6 3.4E-05 41.9 12.5 116 104-231 32-172 (218)
142 PRK05963 3-oxoacyl-(acyl carri 93.2 0.26 5.6E-06 49.8 7.3 85 104-195 223-313 (326)
143 PRK07204 3-oxoacyl-(acyl carri 92.4 0.48 1E-05 47.9 8.1 84 105-195 227-316 (329)
144 PRK12879 3-oxoacyl-(acyl carri 91.9 0.59 1.3E-05 47.1 8.0 83 106-195 223-311 (325)
145 TIGR00747 fabH 3-oxoacyl-(acyl 91.8 0.55 1.2E-05 47.2 7.7 84 105-195 216-305 (318)
146 PRK08235 acetyl-CoA acetyltran 91.6 0.62 1.4E-05 48.7 8.0 91 320-414 302-392 (393)
147 cd00825 decarbox_cond_enzymes 91.4 0.85 1.8E-05 45.8 8.6 78 108-185 205-286 (332)
148 PRK04262 hypothetical protein; 91.3 0.51 1.1E-05 48.3 6.9 68 108-179 209-281 (347)
149 PRK07851 acetyl-CoA acetyltran 91.3 0.57 1.2E-05 49.2 7.3 91 320-414 314-404 (406)
150 CHL00203 fabH 3-oxoacyl-acyl-c 91.2 0.69 1.5E-05 46.8 7.7 81 108-195 226-312 (326)
151 PRK06840 hypothetical protein; 91.0 0.82 1.8E-05 46.4 8.0 81 108-195 237-322 (339)
152 TIGR02430 pcaF beta-ketoadipyl 90.7 0.68 1.5E-05 48.5 7.3 86 320-413 307-398 (400)
153 PLN02326 3-oxoacyl-[acyl-carri 90.7 0.7 1.5E-05 48.0 7.3 84 105-195 277-366 (379)
154 cd00830 KAS_III Ketoacyl-acyl 90.5 0.82 1.8E-05 45.7 7.4 85 104-195 219-309 (320)
155 PRK09050 beta-ketoadipyl CoA t 90.4 0.71 1.5E-05 48.4 7.0 63 320-386 308-375 (401)
156 PRK13359 beta-ketoadipyl CoA t 90.1 0.9 2E-05 47.6 7.5 91 320-414 307-399 (400)
157 PRK06205 acetyl-CoA acetyltran 90.0 1.2 2.6E-05 46.7 8.4 92 320-415 309-403 (404)
158 PRK09352 3-oxoacyl-(acyl carri 89.8 1.2 2.7E-05 44.6 8.0 84 105-195 216-305 (319)
159 PRK07515 3-oxoacyl-(acyl carri 89.7 1.3 2.7E-05 45.8 8.2 86 104-195 267-358 (372)
160 PRK08963 fadI 3-ketoacyl-CoA t 89.2 2.8 6.1E-05 44.3 10.5 91 320-414 320-427 (428)
161 cd00327 cond_enzymes Condensin 89.2 1.9 4E-05 41.4 8.5 79 107-185 144-226 (254)
162 PRK08242 acetyl-CoA acetyltran 88.2 1.2 2.5E-05 46.8 6.7 91 111-228 303-401 (402)
163 TIGR02445 fadA fatty oxidation 87.7 3.4 7.3E-05 43.1 9.8 88 320-414 291-384 (385)
164 PRK08947 fadA 3-ketoacyl-CoA t 87.4 2.6 5.5E-05 44.0 8.7 87 320-413 293-385 (387)
165 PRK06147 3-oxoacyl-(acyl carri 87.4 1.5 3.2E-05 45.1 6.8 87 110-196 236-330 (348)
166 KOG1202 Animal-type fatty acid 87.3 1.9 4E-05 50.2 7.8 123 105-232 86-248 (2376)
167 PRK07850 acetyl-CoA acetyltran 86.9 3.4 7.4E-05 43.1 9.2 93 109-228 286-386 (387)
168 PRK06366 acetyl-CoA acetyltran 86.5 2.9 6.3E-05 43.6 8.5 87 320-414 296-386 (388)
169 COG0332 FabH 3-oxoacyl-[acyl-c 86.4 1.3 2.8E-05 45.0 5.6 56 102-161 217-272 (323)
170 PRK09052 acetyl-CoA acetyltran 85.5 3.1 6.7E-05 43.6 8.1 93 109-228 298-398 (399)
171 PF02803 Thiolase_C: Thiolase, 85.4 3.9 8.5E-05 35.6 7.4 69 111-185 25-101 (123)
172 COG3425 PksG 3-hydroxy-3-methy 85.4 3.3 7.2E-05 42.7 8.0 82 107-193 208-295 (377)
173 cd00831 CHS_like Chalcone and 84.9 2.8 6E-05 43.1 7.4 87 105-195 256-350 (361)
174 PRK07516 acetyl-CoA acetyltran 84.9 3.5 7.5E-05 42.9 8.1 61 320-384 271-349 (389)
175 PRK08131 acetyl-CoA acetyltran 83.6 4 8.6E-05 42.8 7.9 60 320-383 307-368 (401)
176 PRK06954 acetyl-CoA acetyltran 83.3 1.9 4.1E-05 45.1 5.4 92 110-228 297-396 (397)
177 PF02803 Thiolase_C: Thiolase, 83.3 2.4 5.2E-05 36.9 5.2 89 321-413 34-122 (123)
178 PRK05656 acetyl-CoA acetyltran 83.2 2.5 5.3E-05 44.2 6.2 49 111-165 294-342 (393)
179 PRK08257 acetyl-CoA acetyltran 82.4 4.5 9.7E-05 43.7 8.0 77 111-193 295-381 (498)
180 PRK07661 acetyl-CoA acetyltran 82.4 2.2 4.7E-05 44.6 5.4 93 109-228 290-390 (391)
181 PRK09051 beta-ketothiolase; Pr 82.0 6 0.00013 41.4 8.5 50 110-165 294-343 (394)
182 PLN02287 3-ketoacyl-CoA thiola 81.8 3.3 7.1E-05 44.2 6.5 96 110-231 333-437 (452)
183 PRK12578 acetyl-CoA acetyltran 80.0 7.8 0.00017 40.2 8.6 34 320-356 268-301 (385)
184 PRK06690 acetyl-CoA acetyltran 79.9 6 0.00013 40.9 7.6 70 109-184 259-336 (361)
185 cd00829 SCP-x_thiolase Thiolas 79.8 7.5 0.00016 40.0 8.4 45 108-156 251-295 (375)
186 TIGR02446 FadI fatty oxidation 79.2 9.1 0.0002 40.6 8.8 19 213-231 265-283 (430)
187 PRK06289 acetyl-CoA acetyltran 78.7 12 0.00027 39.1 9.6 83 320-406 287-394 (403)
188 PRK12880 3-oxoacyl-(acyl carri 78.6 6.3 0.00014 40.5 7.2 75 105-186 239-317 (353)
189 cd00827 init_cond_enzymes "ini 78.3 8 0.00017 38.6 7.8 92 102-197 217-315 (324)
190 cd00751 thiolase Thiolase are 78.1 8 0.00017 40.2 8.0 42 110-155 287-328 (386)
191 COG1214 Inactive homolog of me 78.1 6.8 0.00015 37.6 6.8 58 108-165 39-97 (220)
192 PLN03169 chalcone synthase fam 78.1 8.8 0.00019 40.1 8.2 87 107-195 280-375 (391)
193 PRK06445 acetyl-CoA acetyltran 77.1 11 0.00024 39.4 8.6 67 110-182 294-368 (394)
194 PF02801 Ketoacyl-synt_C: Beta 76.6 1 2.3E-05 38.5 0.7 76 110-185 27-110 (119)
195 PRK08170 acetyl-CoA acetyltran 75.9 10 0.00022 40.0 8.1 19 213-231 262-280 (426)
196 PF01135 PCMT: Protein-L-isoas 74.9 3.9 8.4E-05 38.9 4.2 42 369-410 49-90 (209)
197 TIGR01930 AcCoA-C-Actrans acet 73.7 9.4 0.0002 39.7 7.1 50 110-165 288-337 (386)
198 PRK07108 acetyl-CoA acetyltran 73.1 3.4 7.4E-05 43.2 3.6 50 110-165 292-341 (392)
199 PRK06064 acetyl-CoA acetyltran 73.0 14 0.0003 38.4 8.1 42 110-155 260-301 (389)
200 TIGR01835 HMG-CoA-S_prok 3-hyd 72.9 10 0.00022 39.3 7.1 73 105-178 202-286 (379)
201 KOG2708 Predicted metalloprote 72.1 7.2 0.00016 37.5 5.1 84 108-197 51-135 (336)
202 PRK09604 UGMP family protein; 71.9 12 0.00027 38.1 7.3 33 107-139 52-84 (332)
203 PRK09268 acetyl-CoA acetyltran 71.2 24 0.00052 37.4 9.4 26 109-134 310-335 (427)
204 COG0533 QRI7 Metal-dependent p 70.8 12 0.00026 38.2 6.7 68 108-177 52-120 (342)
205 cd00834 KAS_I_II Beta-ketoacyl 70.0 8.5 0.00018 39.9 5.8 77 109-185 276-358 (406)
206 PLN02644 acetyl-CoA C-acetyltr 69.4 9.1 0.0002 40.0 5.8 66 111-182 294-367 (394)
207 PRK06504 acetyl-CoA acetyltran 69.4 10 0.00022 39.6 6.2 56 108-170 288-343 (390)
208 PRK06158 thiolase; Provisional 68.9 18 0.0004 37.6 7.9 41 110-155 256-297 (384)
209 cd00826 nondecarbox_cond_enzym 68.1 15 0.00032 38.4 7.1 70 110-183 271-364 (393)
210 PRK08256 lipid-transfer protei 67.4 22 0.00048 37.0 8.2 43 110-156 266-308 (391)
211 TIGR00329 gcp_kae1 metallohydr 66.8 18 0.00038 36.4 7.1 59 107-165 49-108 (305)
212 PRK14691 3-oxoacyl-(acyl carri 66.7 16 0.00035 37.5 6.8 47 108-154 206-253 (342)
213 PRK07314 3-oxoacyl-(acyl carri 66.3 11 0.00024 39.3 5.7 76 110-185 278-359 (411)
214 PRK06519 3-oxoacyl-(acyl carri 66.2 20 0.00043 37.6 7.5 45 109-154 281-326 (398)
215 PRK09185 3-oxoacyl-(acyl carri 65.7 26 0.00057 36.4 8.4 74 111-185 263-340 (392)
216 cd00828 elong_cond_enzymes "el 65.2 12 0.00027 38.8 5.8 78 108-185 274-357 (407)
217 PRK06633 acetyl-CoA acetyltran 64.9 17 0.00038 37.9 6.8 69 110-185 292-369 (392)
218 PRK07801 acetyl-CoA acetyltran 64.6 14 0.0003 38.4 6.0 49 111-165 283-331 (382)
219 PRK05790 putative acyltransfer 64.3 22 0.00047 37.0 7.4 68 110-183 293-368 (393)
220 TIGR03725 bact_YeaZ universal 64.1 9.7 0.00021 35.8 4.4 59 107-165 34-93 (202)
221 COG0304 FabB 3-oxoacyl-(acyl-c 63.1 15 0.00032 38.8 5.8 44 110-153 278-322 (412)
222 PLN02787 3-oxoacyl-[acyl-carri 63.0 19 0.00041 39.4 6.8 76 110-185 407-487 (540)
223 TIGR03150 fabF beta-ketoacyl-a 62.6 17 0.00036 37.7 6.2 45 110-154 277-322 (407)
224 PRK06065 acetyl-CoA acetyltran 62.2 97 0.0021 32.4 11.8 64 320-386 273-355 (392)
225 TIGR03723 bact_gcp putative gl 62.1 24 0.00051 35.7 7.0 59 107-165 50-109 (314)
226 TIGR01796 CM_mono_aroH monofun 62.1 16 0.00034 31.4 4.8 63 105-171 17-82 (117)
227 PRK07937 lipid-transfer protei 61.7 36 0.00077 35.1 8.3 77 111-193 249-333 (352)
228 KOG2707 Predicted metalloprote 61.3 15 0.00032 37.6 5.1 48 108-155 84-136 (405)
229 PRK07855 lipid-transfer protei 61.0 36 0.00078 35.5 8.3 24 111-134 269-292 (386)
230 PTZ00050 3-oxoacyl-acyl carrie 61.0 25 0.00053 37.0 7.2 77 109-185 284-368 (421)
231 PTZ00455 3-ketoacyl-CoA thiola 60.4 23 0.00049 37.7 6.8 43 110-156 311-353 (438)
232 cd00832 CLF Chain-length facto 60.0 19 0.00041 37.6 6.1 76 109-185 271-351 (399)
233 PRK05952 3-oxoacyl-(acyl carri 59.0 19 0.0004 37.5 5.8 76 108-185 254-334 (381)
234 PF07736 CM_1: Chorismate muta 59.0 22 0.00047 30.7 5.1 58 104-165 16-76 (118)
235 PF00814 Peptidase_M22: Glycop 58.7 14 0.0003 36.5 4.6 58 108-165 31-89 (268)
236 cd02185 AroH Chorismate mutase 58.6 20 0.00043 30.8 4.8 63 105-170 17-81 (117)
237 KOG1390 Acetyl-CoA acetyltrans 58.5 7.6 0.00017 39.2 2.6 86 320-413 305-394 (396)
238 smart00825 PKS_KS Beta-ketoacy 58.4 31 0.00067 36.0 7.4 47 108-154 279-326 (424)
239 PRK14878 UGMP family protein; 58.2 21 0.00045 36.3 5.8 44 111-154 49-97 (323)
240 PRK08304 stage V sporulation p 55.5 55 0.0012 33.5 8.1 92 107-200 207-315 (337)
241 PRK06501 3-oxoacyl-(acyl carri 55.2 31 0.00067 36.4 6.7 44 110-153 291-335 (425)
242 PLN03173 chalcone synthase; Pr 55.1 34 0.00074 35.8 6.9 70 106-179 275-350 (391)
243 PLN03170 chalcone synthase; Pr 55.1 32 0.0007 36.0 6.8 71 105-179 278-354 (401)
244 PRK08722 3-oxoacyl-(acyl carri 54.2 29 0.00064 36.4 6.3 44 110-153 280-324 (414)
245 PRK12404 stage V sporulation p 52.8 63 0.0014 32.9 8.0 92 107-200 205-313 (334)
246 PF00195 Chal_sti_synt_N: Chal 52.3 16 0.00035 35.2 3.7 74 320-402 113-190 (226)
247 PRK08313 acetyl-CoA acetyltran 52.0 74 0.0016 33.1 8.9 44 109-156 256-301 (386)
248 PRK09116 3-oxoacyl-(acyl carri 51.1 28 0.0006 36.5 5.6 46 109-154 276-322 (405)
249 PLN03168 chalcone synthase; Pr 50.6 35 0.00075 35.7 6.1 72 320-400 114-189 (389)
250 PRK06365 acetyl-CoA acetyltran 50.5 85 0.0018 33.2 9.1 42 110-156 295-339 (430)
251 cd00833 PKS polyketide synthas 50.4 40 0.00087 34.9 6.6 78 108-185 279-365 (421)
252 PRK06333 3-oxoacyl-(acyl carri 50.3 30 0.00065 36.3 5.7 45 109-153 289-334 (424)
253 PLN02836 3-oxoacyl-[acyl-carri 50.2 78 0.0017 33.5 8.8 25 110-134 301-325 (437)
254 PRK07910 3-oxoacyl-(acyl carri 50.1 37 0.0008 35.8 6.3 45 110-154 288-333 (418)
255 TIGR03722 arch_KAE1 universal 48.4 31 0.00067 34.9 5.3 33 105-138 45-77 (322)
256 PLN03172 chalcone synthase fam 46.1 47 0.001 34.7 6.3 68 107-178 276-349 (393)
257 PRK06157 acetyl-CoA acetyltran 45.7 1.2E+02 0.0026 31.7 9.2 43 110-156 268-312 (398)
258 PTZ00340 O-sialoglycoprotein e 44.6 69 0.0015 33.0 7.0 57 108-165 51-109 (345)
259 PRK09605 bifunctional UGMP fam 41.6 46 0.001 36.1 5.6 61 103-168 46-111 (535)
260 PRK06066 acetyl-CoA acetyltran 41.1 1.2E+02 0.0027 31.6 8.4 42 111-156 259-302 (385)
261 PLN03171 chalcone synthase-lik 41.1 1.1E+02 0.0023 32.1 8.0 71 104-179 275-360 (399)
262 COG2518 Pcm Protein-L-isoaspar 40.0 23 0.0005 33.7 2.6 36 375-410 55-90 (209)
263 KOG1406 Peroxisomal 3-ketoacyl 38.8 30 0.00064 34.1 3.1 28 107-134 271-298 (408)
264 COG4126 Hydantoin racemase [Am 38.8 2.7E+02 0.0059 26.8 9.5 101 63-185 118-218 (230)
265 PF07451 SpoVAD: Stage V sporu 38.7 62 0.0013 32.7 5.4 90 107-198 202-307 (329)
266 PRK09585 anmK anhydro-N-acetyl 38.7 70 0.0015 33.2 6.1 77 99-175 62-148 (365)
267 PRK08329 threonine synthase; V 37.1 59 0.0013 33.3 5.3 64 343-406 275-345 (347)
268 KOG1794 N-Acetylglucosamine ki 36.3 2E+02 0.0043 29.0 8.4 111 107-229 46-164 (336)
269 TIGR01991 HscA Fe-S protein as 35.5 2.1E+02 0.0046 31.6 9.7 48 107-155 292-339 (599)
270 PF09663 Amido_AtzD_TrzD: Amid 35.4 1.2E+02 0.0026 31.1 6.8 73 103-181 127-202 (365)
271 PLN02854 3-ketoacyl-CoA syntha 34.7 1.7E+02 0.0037 31.9 8.4 42 110-155 387-434 (521)
272 PRK13410 molecular chaperone D 34.4 1.3E+02 0.0027 34.0 7.7 50 105-155 306-355 (668)
273 KOG1394 3-oxoacyl-(acyl-carrie 34.1 52 0.0011 33.9 4.1 45 110-154 303-348 (440)
274 TIGR02845 spore_V_AD stage V s 33.9 2E+02 0.0043 29.4 8.2 92 107-200 201-308 (327)
275 PRK06059 lipid-transfer protei 33.9 1.4E+02 0.0031 31.0 7.7 90 320-413 284-398 (399)
276 PRK05183 hscA chaperone protei 33.6 2.2E+02 0.0048 31.6 9.4 47 108-155 309-355 (616)
277 PRK07103 polyketide beta-ketoa 33.0 1.1E+02 0.0023 32.1 6.5 24 111-134 284-307 (410)
278 PLN00415 3-ketoacyl-CoA syntha 32.5 1.4E+02 0.003 32.1 7.2 72 320-400 147-222 (466)
279 PRK08142 acetyl-CoA acetyltran 30.8 74 0.0016 33.2 4.9 41 109-154 256-297 (388)
280 PF05393 Hum_adeno_E3A: Human 30.2 67 0.0015 26.2 3.3 31 2-32 36-66 (94)
281 KOG1391 Acetyl-CoA acetyltrans 28.5 78 0.0017 31.2 4.1 49 111-165 296-344 (396)
282 PF06924 DUF1281: Protein of u 27.8 23 0.00049 31.1 0.3 37 48-84 72-108 (134)
283 PLN03184 chloroplast Hsp70; Pr 26.9 1.9E+02 0.004 32.6 7.5 47 108-155 346-392 (673)
284 PLN02932 3-ketoacyl-CoA syntha 26.6 1.2E+02 0.0027 32.6 5.7 56 320-384 161-220 (478)
285 CHL00094 dnaK heat shock prote 26.4 2E+02 0.0043 32.0 7.5 46 109-155 310-355 (621)
286 PF02801 Ketoacyl-synt_C: Beta 26.1 1.1E+02 0.0024 25.8 4.4 60 321-384 37-103 (119)
287 PF08392 FAE1_CUT1_RppA: FAE1/ 25.9 2.4E+02 0.0053 28.3 7.2 79 309-401 90-172 (290)
288 PF11392 DUF2877: Protein of u 25.7 96 0.0021 26.3 3.8 46 340-385 64-109 (110)
289 PRK00290 dnaK molecular chaper 24.9 2.3E+02 0.0051 31.4 7.8 48 107-155 306-353 (627)
290 COG4401 AroH Chorismate mutase 24.9 1.4E+02 0.0031 25.4 4.5 65 105-172 19-85 (125)
291 TIGR02714 amido_AtzD_TrzD ring 24.8 2.1E+02 0.0046 29.2 6.5 33 103-135 128-161 (366)
292 PTZ00186 heat shock 70 kDa pre 24.4 2.7E+02 0.0059 31.3 8.1 45 110-155 336-380 (657)
293 TIGR03285 methan_mark_14 putat 24.1 1.6E+02 0.0034 30.6 5.5 34 102-135 61-94 (445)
294 TIGR02350 prok_dnaK chaperone 24.1 2.1E+02 0.0045 31.6 7.1 48 107-155 304-351 (595)
295 KOG3418 60S ribosomal protein 23.1 1.1E+02 0.0024 26.9 3.6 48 389-439 4-55 (136)
296 PLN02192 3-ketoacyl-CoA syntha 23.0 2.8E+02 0.006 30.2 7.5 72 320-400 189-264 (511)
297 TIGR03844 cysteate_syn cysteat 23.0 91 0.002 32.7 3.8 64 343-406 310-381 (398)
298 PRK13411 molecular chaperone D 21.9 2.5E+02 0.0053 31.5 7.2 45 110-155 310-354 (653)
299 PLN02377 3-ketoacyl-CoA syntha 21.7 1.9E+02 0.0042 31.3 6.1 55 320-383 185-243 (502)
300 PF13344 Hydrolase_6: Haloacid 21.2 1.5E+02 0.0032 24.4 4.1 59 128-197 31-90 (101)
301 PRK13942 protein-L-isoaspartat 21.1 1.8E+02 0.0038 27.4 5.1 34 374-407 58-91 (212)
302 PF12273 RCR: Chitin synthesis 20.6 1E+02 0.0023 26.7 3.1 11 33-43 34-44 (130)
303 cd03765 proteasome_beta_bacter 20.4 1.4E+02 0.003 28.9 4.3 33 102-134 166-198 (236)
304 PTZ00009 heat shock 70 kDa pro 20.1 3.1E+02 0.0066 30.8 7.5 45 110-155 315-359 (653)
305 PRK07591 threonine synthase; V 20.0 1E+02 0.0022 32.6 3.4 70 342-411 320-397 (421)
No 1
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=9.5e-96 Score=765.11 Aligned_cols=427 Identities=41% Similarity=0.744 Sum_probs=396.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceE
Q 039047 4 LFYLYLLPSLYLMFKIWKWVDEKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQT 83 (465)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~ 83 (465)
++++.+++++++...+|++ +||++||++||+||+|+++++++.+.++++..+.+.+++++++|++|++++||||++|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~---~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~t 166 (521)
T PLN02854 90 ATRLTGSAFLLFLLGLYWA---KRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDET 166 (521)
T ss_pred HHHHHHHHHHHHHHHHHHH---cCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcc
Confidence 4555555667777888888 9999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCccccCCCCCCChhhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeee
Q 039047 84 YSPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNL 163 (465)
Q Consensus 84 ~~~~~~~~~~~~~~t~~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l 163 (465)
|+|++.++.+++ ++|+++++|++.+++.|+++||+++|++|+|||+||++||++++.|+++++|+++||+++++.+||+
T Consensus 167 y~P~~~~~~~~~-~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdL 245 (521)
T PLN02854 167 YLPRGITSRPPN-LCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNL 245 (521)
T ss_pred ccCccccCCCCc-chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEec
Confidence 999999988776 4999999999999999999999999999999999999999999999999999999999989999999
Q ss_pred cCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeece
Q 039047 164 TGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCL 243 (465)
Q Consensus 164 ~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~ 243 (465)
+||||+||+.||++|+++++++++++||||++|.+|.+||.++||++++++++|||||+|+||++++.++++++|+|.++
T Consensus 246 sgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~ 325 (521)
T PLN02854 246 GGMGCSAGLISIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHT 325 (521)
T ss_pred ccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999998764444578999999
Q ss_pred EEeeeCCCCCCCccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcC
Q 039047 244 VRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKK 323 (465)
Q Consensus 244 ~~t~~~sd~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g 323 (465)
++++.++|++.|+|+++++|+.|..|+++++++|.+++++++.|++++||.++|..++++|+...+.+.+.+. +...
T Consensus 326 v~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~---gl~~ 402 (521)
T PLN02854 326 VRTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKA---KVKP 402 (521)
T ss_pred EEEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHc---CCCc
Confidence 9999999999999999999888877889999999888899999999999999999999999888666554432 2333
Q ss_pred CCCCccCCccEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCc
Q 039047 324 AGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGA 403 (465)
Q Consensus 324 ~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGa 403 (465)
+.|||++||||||+||+|++|++.++++||++++++++|+++++|||||||||+||+|++++++|++++||+|||+|||+
T Consensus 403 ~~pd~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGs 482 (521)
T PLN02854 403 YIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGS 482 (521)
T ss_pred cCCcccccCcEEEECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEch
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhheeeeEEEecCCCC--CCCCcccccccCCCCCC
Q 039047 404 GFKCNSCVWEVVRDLDGN--VGNVWKDIIDSYPPQSL 438 (465)
Q Consensus 404 G~~~~~~v~~~~~~~~~~--~~~~w~~~i~~~p~~~~ 438 (465)
||+|++++||++++++++ ++|||+||||+||| ++
T Consensus 483 Gft~~sav~~~~~~~~~~~~~~~~w~~~i~~yp~-~~ 518 (521)
T PLN02854 483 GFKCNSAVWKALREIPTGESTGNPWADSIDRYPV-KV 518 (521)
T ss_pred hhhhhheeeEEeccCCccccCCCCchhhHhhCCC-CC
Confidence 999999999999998864 57999999999999 65
No 2
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.6e-96 Score=769.47 Aligned_cols=431 Identities=40% Similarity=0.717 Sum_probs=393.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEe
Q 039047 5 FYLYLLPSLYLMFKIWKWVDEKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTY 84 (465)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~ 84 (465)
+++.+++++++...+|++ +||++||++||+||+|+++++++.+.++++..+++.+++++++|++|++++||||++||
T Consensus 79 ~~~~~~~~~~~~~~~~~~---~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~ 155 (511)
T PLN02192 79 SVILCSTLLVFLSTLYFL---TRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTY 155 (511)
T ss_pred HHHHHHHHHHHHHHHHHH---cCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccc
Confidence 444455556677778888 99999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCccccCCCCCCChhhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeec
Q 039047 85 SPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLT 164 (465)
Q Consensus 85 ~~~~~~~~~~~~~t~~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~ 164 (465)
+|+++++.+++ ++|+++++|+++++++|+++||+++|++|+|||+||++||++++.|+++++|+++||+++++.+||++
T Consensus 156 ~p~~~~~~~~~-~~~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLs 234 (511)
T PLN02192 156 LPEAVLNVPPN-PCMAEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLG 234 (511)
T ss_pred CChhhccCCCC-ccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcc
Confidence 99999988876 49999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred CCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceE
Q 039047 165 GMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLV 244 (465)
Q Consensus 165 ~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~ 244 (465)
||||+||+.||++|+++++++++++||||++|.+|.+||.++||+++++|++|||||+|+||++++.++.+++|+|.+.+
T Consensus 235 gmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~v 314 (511)
T PLN02192 235 GMGCSAGLISIDLAKHLLQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTV 314 (511)
T ss_pred cchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999997654445789999999
Q ss_pred EeeeCCCCCCCccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCC
Q 039047 245 RTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKA 324 (465)
Q Consensus 245 ~t~~~sd~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~ 324 (465)
+++.+++++.|+|+++++|++|..|+.|+|++|.+++++++.++++++|.++|..|..++......+++++. +...+
T Consensus 315 rt~~~~dd~~~~~v~~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~---~~~~~ 391 (511)
T PLN02192 315 RTHKGADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKM---KLKPY 391 (511)
T ss_pred EEEecCChhhccceecccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHH---Hhhhc
Confidence 999999999999999999999999999999999999999999999999999998777665444333444432 22335
Q ss_pred CCCccCCccEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCch
Q 039047 325 GVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAG 404 (465)
Q Consensus 325 ~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG 404 (465)
.|+|+.+|||||+||+|++|++.++++||++++++++|+++|+|||||||||+||+|++++++|++++||+|||+|||+|
T Consensus 392 ~p~~~~~Idhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsG 471 (511)
T PLN02192 392 IPDFKLAFEHFCIHAGGRAVLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSG 471 (511)
T ss_pred cHHHHHhhceEeeccCCHHHHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcch
Confidence 67888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhheeeeEEEecCCCCC-CCCcccccccCCCCCCCCccccc
Q 039047 405 FKCNSCVWEVVRDLDGNV-GNVWKDIIDSYPPQSLANPYLEK 445 (465)
Q Consensus 405 ~~~~~~v~~~~~~~~~~~-~~~w~~~i~~~p~~~~~~~~~~~ 445 (465)
|+|++++||+++++++++ .|||+||||+||| ++ |+++.
T Consensus 472 f~~~sav~~~~~~~~~~~~~~~w~~~i~~yp~-~~--~~~~~ 510 (511)
T PLN02192 472 FKCNSAVWKALRTVNPAKEKNPWMDEIHEFPV-DV--PKVST 510 (511)
T ss_pred HhhhhhheeeecccCCcccCCCchhhHHhCCC-CC--CCCCC
Confidence 999999999999988754 4999999999999 67 66553
No 3
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=3.9e-96 Score=764.22 Aligned_cols=426 Identities=40% Similarity=0.688 Sum_probs=395.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCceEEEeeeeecCCCCCccCHHHHHHHHHhh---ccCCcch---HHHHHHHHHHcC
Q 039047 5 FYLYLLPSLYLMFKIWKWVDEKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRT---KNLGLNE---YKFLLKAIVSSG 78 (465)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~---~~~~~~~---~~f~~ki~~~sG 78 (465)
+++.+++++++.+.+|++ +||++||++||+||+|+++++++.+.++++..+. +.+++++ ++|++||+++||
T Consensus 45 ~~~~~~~~~~~~~~~~~~---~~~~~vyl~d~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsG 121 (478)
T PLN02932 45 SLTMFFLYLALGSTLYLM---TRPKPVYLVDFSCYLPPSHLKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSG 121 (478)
T ss_pred HHHHHHHHHHHHHHHHHh---cCCCcEEEEeeeeecCcccccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcC
Confidence 444445556677778888 9999999999999999999999999999999877 6788888 999999999999
Q ss_pred ccceEeecCccccCCCCCCChhhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCc
Q 039047 79 IGEQTYSPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDI 158 (465)
Q Consensus 79 I~~r~~~~~~~~~~~~~~~t~~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~ 158 (465)
|++|||+|+..++.+++ .+|+.+++|+++|+++|+++||+++|++|+|||+||++|+.+++.|+++++|+++||+++++
T Consensus 122 ig~~t~~p~~~~~~~~~-~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i 200 (478)
T PLN02932 122 LGQETYIPEGLQCLPLQ-QNLAVSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNI 200 (478)
T ss_pred CCCceeeccccccCCHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCc
Confidence 99999999998776554 48999999999999999999999999999999999999887889999999999999998899
Q ss_pred eeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccce
Q 039047 159 KVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALF 238 (465)
Q Consensus 159 ~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~ 238 (465)
.+||++||||+|++.||++|+++++++++++||||++|.+|.+||.+++|++++++++|||||+|+||++++.++.+++|
T Consensus 201 ~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~ 280 (478)
T PLN02932 201 KSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKY 280 (478)
T ss_pred eEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEecccccccCcce
Confidence 99999999999999999999999999999999999999999999988888999999999999999999997643334789
Q ss_pred eeeceEEeeeCCCCCCCccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCC
Q 039047 239 KLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTP 318 (465)
Q Consensus 239 ~L~~~~~t~~~sd~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~ 318 (465)
+|.+.++++.++|++.|+|+++++|+.|..|+.|++++|..++++++.|++++||.++|..|.+++++..+.+++++.
T Consensus 281 ~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~-- 358 (478)
T PLN02932 281 ELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNP-- 358 (478)
T ss_pred EEEeeeeeeeccCCCccccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHH--
Confidence 999999999999999999999999888988999999999999999999999999999999999999998888887754
Q ss_pred cCCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEE
Q 039047 319 KGEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLM 398 (465)
Q Consensus 319 l~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~ 398 (465)
+..++.++|+++|||||+||+|++|++.++++||++++++++|+++|+|||||||||+||+|++++++|++++||+|||
T Consensus 359 -~~~~~~~~~~~~id~f~iHqggr~IIdav~k~LgL~~~~~e~s~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~ 437 (478)
T PLN02932 359 -KLKHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQ 437 (478)
T ss_pred -HhhcCcHhHHhhhceEEEccCCHHHHHHHHHHcCCChHHHHHHHHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEE
Confidence 3456778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeCchhhhheeeeEEEecCCCCCCCCcccccccCCCCCC
Q 039047 399 ISFGAGFKCNSCVWEVVRDLDGNVGNVWKDIIDSYPPQSL 438 (465)
Q Consensus 399 ~sfGaG~~~~~~v~~~~~~~~~~~~~~w~~~i~~~p~~~~ 438 (465)
+|||+||+||++|||++++++++++|||+||||+||| ++
T Consensus 438 iaFGsGf~~~s~vw~~~~~~~~~~~~~w~~~i~~yp~-~~ 476 (478)
T PLN02932 438 IALGSGFKCNSSVWVALRNVKPSANNPWEDCLHKYPV-EI 476 (478)
T ss_pred EEEeccHHHHHHHHHHhcCCCCcCCCCchhhHhhCCC-CC
Confidence 9999999999999999999988667999999999999 44
No 4
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.6e-93 Score=746.97 Aligned_cols=425 Identities=40% Similarity=0.723 Sum_probs=388.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceE
Q 039047 4 LFYLYLLPSLYLMFKIWKWVDEKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQT 83 (465)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~ 83 (465)
+++++++.++++...+|++ +||++||++||+||+|+++++++.+.++++..+++.+++++++|++|++++|||++++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~---~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t 150 (502)
T PLN02377 74 VSIIICSAFLVFGLTVYIM---TRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDT 150 (502)
T ss_pred HHHHHHHHHHHHHHHHHHH---cCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCcc
Confidence 3444455556677778888 9999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCccccCCCCCCChhhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeee
Q 039047 84 YSPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNL 163 (465)
Q Consensus 84 ~~~~~~~~~~~~~~t~~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l 163 (465)
|+|+..++.+++ .+|+.+++|+++++++|+++||+++|++|+|||+||++||++++.|+++++|+++||+++++.+||+
T Consensus 151 ~~p~~~~~~~~~-~~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL 229 (502)
T PLN02377 151 YVPEAMHYIPPR-PSMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNL 229 (502)
T ss_pred ccCchhccCCcc-chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEec
Confidence 999998887766 4899999999999999999999999999999999999899999999999999999999989999999
Q ss_pred cCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeece
Q 039047 164 TGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCL 243 (465)
Q Consensus 164 ~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~ 243 (465)
+||||+||+.||++|+++++++++++||||++|.+|.+|+.++++++++++++|||||+|+||++++.++.+++|+|.++
T Consensus 230 ~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~i 309 (502)
T PLN02377 230 GGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHV 309 (502)
T ss_pred ccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceE
Confidence 99999999999999999999999999999999999999988888888899999999999999998655444568888899
Q ss_pred EEeeeCCCCCCCccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcC
Q 039047 244 VRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKK 323 (465)
Q Consensus 244 ~~t~~~sd~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g 323 (465)
++++.+++++.|+++++++|+.|..|+.+++++|.+++++++.|++++||.++|.+|++.+......+++++.. ...
T Consensus 310 v~t~~~~d~~~~~~i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~---l~~ 386 (502)
T PLN02377 310 VRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKK---MKP 386 (502)
T ss_pred EEEEEEEcCCccceeeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHH---Hhh
Confidence 99999999999999999988888888999999999999999999999999999998877765554444444321 112
Q ss_pred CCCCccCCccEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCc
Q 039047 324 AGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGA 403 (465)
Q Consensus 324 ~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGa 403 (465)
+.|++++||||||+||+|++|++.++++|||+++++++|+++++|||||||||+||+|++++++|++++||+|||+|||+
T Consensus 387 ~~p~~~~didhf~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGs 466 (502)
T PLN02377 387 YIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGS 466 (502)
T ss_pred ccCCcHhhcCEEEECCCCHHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEcc
Confidence 34577899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhheeeeEEEecCCCCCCCCcccccccCCC
Q 039047 404 GFKCNSCVWEVVRDLDGNVGNVWKDIIDSYPP 435 (465)
Q Consensus 404 G~~~~~~v~~~~~~~~~~~~~~w~~~i~~~p~ 435 (465)
||+|++++||++++++++++|||+||||+|||
T Consensus 467 Gf~~~s~v~~~~~~~~~~~~~~w~~~i~~yp~ 498 (502)
T PLN02377 467 GFKCNSAVWEALRHVKPSNNSPWEDCIDKYPV 498 (502)
T ss_pred ccEeeeEEEEEecCCCCCCCCCchhhHhhCCC
Confidence 99999999999999988767999999999999
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.7e-92 Score=728.70 Aligned_cols=422 Identities=40% Similarity=0.734 Sum_probs=393.7
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeec
Q 039047 7 LYLLPSLYLMFKIWKWVDEKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSP 86 (465)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~ 86 (465)
-+.++++++++.+|.+ +||++||++||+||+|+++++++.+.++++..+++.+++++++|++|++++|||++++|.|
T Consensus 39 ~~~~~~~~~~~~~~~~---~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p 115 (466)
T PLN00415 39 KIGLLLISIFFYAYST---TRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSP 115 (466)
T ss_pred HHHHHHHHHHHHHHHH---cCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeC
Confidence 3345556667778888 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCChhhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCC
Q 039047 87 RIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGM 166 (465)
Q Consensus 87 ~~~~~~~~~~~t~~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~ 166 (465)
+..++.++. ++|+++++|++...+.|+++||+++|++|+|||+||++||++++.|+++++|+++||+++++.+||+++|
T Consensus 116 ~~~~~~~~~-~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gm 194 (466)
T PLN00415 116 RCMLTSPPT-PSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGM 194 (466)
T ss_pred CccccCCCC-CChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEeccc
Confidence 998887765 4899999999999999999999999999999999999888888999999999999999989999999999
Q ss_pred cchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEe
Q 039047 167 GCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRT 246 (465)
Q Consensus 167 gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t 246 (465)
||+|++.||++|++++++++.++||||++|.+|.+||.++|+++++++++|||||||+||++++..+.+++|+|.+++++
T Consensus 195 GCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt 274 (466)
T PLN00415 195 GCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRT 274 (466)
T ss_pred cchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEe
Confidence 99999999999999999999999999999999998888899999999999999999999999776555679999999999
Q ss_pred eeCCCCCCCccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCC
Q 039047 247 HHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGV 326 (465)
Q Consensus 247 ~~~sd~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~ 326 (465)
+.+.+++.|.|+++.+|+.|..|+.|+|++|.+++++++.|+++++|.++|.+|+++++...+.++.++. +...+.|
T Consensus 275 ~~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~---~~~~~~p 351 (466)
T PLN00415 275 HKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRL---KVSPYVP 351 (466)
T ss_pred cCCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhc---cCCCCCC
Confidence 9988888999999999999999999999999999999999999999999999999999998888776643 3345678
Q ss_pred CccCCccEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhh
Q 039047 327 NFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFK 406 (465)
Q Consensus 327 ~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~ 406 (465)
||+..++|||+|+||++|++++++.|||+++++++||++|+|||||||+|+||+|+++++++++++||++||+|||+||+
T Consensus 352 d~~~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~ 431 (466)
T PLN00415 352 DFKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFK 431 (466)
T ss_pred CccccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcch
Confidence 88777999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hheeeeEEEecCCCCCC---CCcccccccCCC
Q 039047 407 CNSCVWEVVRDLDGNVG---NVWKDIIDSYPP 435 (465)
Q Consensus 407 ~~~~v~~~~~~~~~~~~---~~w~~~i~~~p~ 435 (465)
|+++|||++++++++.+ |||+||||+|||
T Consensus 432 ~es~v~~~~~~~~~~~~~~~~~w~~~i~~yp~ 463 (466)
T PLN00415 432 CNSIVWRALRTIPANESLVGNPWGDSVHKYPV 463 (466)
T ss_pred hhHhHHHHhccCCcccccCCCCchhhHHhCCC
Confidence 99999999999887543 999999999999
No 6
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=3.4e-69 Score=523.08 Aligned_cols=286 Identities=43% Similarity=0.748 Sum_probs=278.5
Q ss_pred cCCCceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhh
Q 039047 26 KRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDE 105 (465)
Q Consensus 26 ~r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e 105 (465)
+|+++||++||+||+|+++++++.+.+++++...+.+++++++|++|++++|||+++||+|+..++.+++ .++.++++|
T Consensus 4 ~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~-~s~~~a~~E 82 (290)
T PF08392_consen 4 RRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPD-PSLAAAREE 82 (290)
T ss_pred CCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCc-ccHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998887776 599999999
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcC
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTY 185 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g 185 (465)
++.+++.|++++|+++|++|+|||+||+|||.+++.||++++|+++|||++++..||++||||++++.+|++|+++|+.+
T Consensus 83 ae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~ 162 (290)
T PF08392_consen 83 AEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAH 162 (290)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCCC
Q 039047 186 KNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQ 265 (465)
Q Consensus 186 ~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~ 265 (465)
++.+||||++|.+|.+||.|++|+|+++||||||||||+|||+.+.++.+++|+|.|++|+|.+++|++|+|++|++|++
T Consensus 163 p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD~~ 242 (290)
T PF08392_consen 163 PNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEEDEE 242 (290)
T ss_pred CCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEcCC
Confidence 99999999999999999999999999999999999999999999988788999999999999999999999999999999
Q ss_pred CCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHH
Q 039047 266 GRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRK 312 (465)
Q Consensus 266 G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~ 312 (465)
|..|+.|+|+++.+++++++.||+++||+|||.+|+++|+++.+.+|
T Consensus 243 g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~rk 289 (290)
T PF08392_consen 243 GIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIARK 289 (290)
T ss_pred CceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999877665
No 7
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=3.6e-56 Score=442.87 Aligned_cols=320 Identities=22% Similarity=0.319 Sum_probs=272.4
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHH
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEE 108 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~ 108 (465)
..++|.++|.|+|+. +++|+++.+.+.. ++ +||..++||++||+..++ | ...+
T Consensus 2 ~~a~i~g~G~~lP~~--~vtn~d~e~~~~t----sd------ewI~~rtGir~R~~a~~~-----e----------~~s~ 54 (323)
T COG0332 2 MNAKILGIGSYLPER--VVTNADLEKRVDT----SD------EWIETRTGIRERRIAADD-----E----------TTSD 54 (323)
T ss_pred CcceEEEEEeecCCc--ccChHHHHhccCC----Cc------ceeeeecCCceeeecCCC-----c----------cHHH
Confidence 468999999999997 8999999854421 22 488999999999988763 2 2348
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCC
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKN 187 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~ 187 (465)
|+++|+++||+++|++|+|||+||++| |+++++|+++++||++||+. ++.+||++ .+|+|++.||.+|.+++++|.+
T Consensus 55 la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~-aaCsgf~yaL~~A~~~i~sG~~ 132 (323)
T COG0332 55 LAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQ-AACSGFLYALSVADGLIRSGGY 132 (323)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeech-hhhHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999975 78999999999999999998 59999999 5999999999999999999999
Q ss_pred CEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCCCCC
Q 039047 188 MNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGR 267 (465)
Q Consensus 188 ~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~G~ 267 (465)
++||||++|++|. +.+++||.+ ..+|||||+|+||++.+... ++.++++++|++.+++++.+......
T Consensus 133 k~vLVVg~e~~S~-~ld~~dR~t---~vlFgDGAgAvvl~~~~~~~--------~i~~~~l~sdg~~~~~l~~~~~~~~~ 200 (323)
T COG0332 133 KNVLVVGAETLSR-ILDWTDRDT---CVLFGDGAGAVVLEATEDDN--------GILDTDLGSDGSQGDLLYLPGGGSAT 200 (323)
T ss_pred CEEEEEehhHhhc-cCCHhhccc---eEEEcCCceEEEEecCCCCc--------CeeeeeeeccccCCCeeeccCCCCcc
Confidence 9999999999998 567788876 78999999999999987332 46778889999888766654321110
Q ss_pred CceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHHHHH
Q 039047 268 PGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDG 347 (465)
Q Consensus 268 ~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~ii~~ 347 (465)
.+.. .. .+..+|.++++|++++..+.+.+.+. |+++++. ++|||||++||.|.++++.
T Consensus 201 -----~~~~-----------~~-~~~~~m~Gr~vfk~av~~~~~~~~~~--L~~~~l~---~~dId~~vpHQan~ri~~~ 258 (323)
T COG0332 201 -----PKEE-----------SG-GGLLVMDGREVFKFAVRAMPKAIEEV--LEKAGLT---PEDIDWFVPHQANLRIIEA 258 (323)
T ss_pred -----cccc-----------cc-ccceeeccHHHHHHHHHHHHHHHHHH--HHHcCCC---HHHCCEEccccccHHHHHH
Confidence 0000 00 23355677999999998877654433 5678888 6999999999999999999
Q ss_pred HHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeeeEE
Q 039047 348 IGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEV 414 (465)
Q Consensus 348 i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~ 414 (465)
++++|+++++++ ..++++|||||+||+|+.|+++.++|++|+||+|++.+||+|++|+++++||
T Consensus 259 i~~~l~~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~ 322 (323)
T COG0332 259 IAKKLGIPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRW 322 (323)
T ss_pred HHHHcCCCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEe
Confidence 999999999999 5999999999999999999999999999999999999999999999999998
No 8
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=8.7e-52 Score=426.72 Aligned_cols=350 Identities=19% Similarity=0.271 Sum_probs=269.9
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhhccC-CcchHH-HHHHHHHHcCccceEeecCc-ccc-CCC----CCC--
Q 039047 28 DKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNL-GLNEYK-FLLKAIVSSGIGEQTYSPRI-MFA-GRE----DNP-- 97 (465)
Q Consensus 28 ~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~-~~~~~~-f~~ki~~~sGI~~r~~~~~~-~~~-~~~----~~~-- 97 (465)
..+.+|+++|+..|++ .++|+++.+.+.+..+. +....+ .++++++++||++|+.+-+. ... .++ ..|
T Consensus 14 ~~~~~I~~igta~P~~--~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~ 91 (393)
T PLN03172 14 EGPATILAIGKATPAN--CVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSL 91 (393)
T ss_pred CCCeEEEEEEecCCCc--cccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCH
Confidence 3568999999999997 89999999988755421 122233 36789999999999875421 111 000 112
Q ss_pred --ChhhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCcee-eeecCCcchHHHHH
Q 039047 98 --TLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKV-FNLTGMGCSASLIS 174 (465)
Q Consensus 98 --t~~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~-~~l~~~gCs~~~~a 174 (465)
.+..+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++.. ++++ +||+|++.|
T Consensus 92 ~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~a 170 (393)
T PLN03172 92 DARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQ-QGCFAGGTV 170 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeC-CchHHHHHH
Confidence 355688999999999999999999999999999998754444599999999999999977766 4556 899999999
Q ss_pred HHHHHHHHhcCCCCEEEEEEecCCCCCCCCCCC--ccchhhhhhccccceEEEEecCCccc-cccceeeeceEEeee-CC
Q 039047 175 VDIVRSVFKTYKNMNAMVVTSESLSPNWYSGND--RSMILANCLFRSGGAVILLSNKRSLE-RNALFKLKCLVRTHH-GA 250 (465)
Q Consensus 175 l~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~~d--r~~~~~~~lfgDGaaA~lLs~~~~~~-~~~~~~L~~~~~t~~-~s 250 (465)
|++|.+++++++.++||||++|.+|.+++.+.| .+.+++++||||||+|+||++.+... .++.|++.+...+.. .+
T Consensus 171 L~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t 250 (393)
T PLN03172 171 LRLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDS 250 (393)
T ss_pred HHHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCC
Confidence 999999999999999999999999976655444 34567789999999999999865421 224566655433332 33
Q ss_pred CCCCCccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccC
Q 039047 251 RDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRT 330 (465)
Q Consensus 251 d~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~ 330 (465)
++ .+...+.. .| .++.+++++|+.+.+.+... .++++ ++.|+. ..
T Consensus 251 ~~-~~~~~i~~---~G-~~~~l~~~vp~~~~~~i~~~----------------------~~~~L-----~~~gl~---~~ 295 (393)
T PLN03172 251 DG-AIDGHLRE---VG-LTFHLLKDVPGLISKNIEKS----------------------LVEAF-----APIGIN---DW 295 (393)
T ss_pred cc-cccceEEc---CC-cEEEEechHHHHHHHHHHHH----------------------HHHHh-----hhcCCC---cc
Confidence 33 22222221 23 24567788887655443222 22333 345666 48
Q ss_pred CccEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHH----HcCCCCCC---CEEEEEeeCc
Q 039047 331 GVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYME----AKKRLKKG---DRVLMISFGA 403 (465)
Q Consensus 331 did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~----~~g~l~~G---d~vl~~sfGa 403 (465)
||++|++||+|++|++.++++||++++++.+||++|++||||||+|+|++|+++. ++|++++| |++++++||+
T Consensus 296 di~~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGp 375 (393)
T PLN03172 296 NSIFWIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGP 375 (393)
T ss_pred ccceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999986 45788777 8999999999
Q ss_pred hhhhheeeeEEE
Q 039047 404 GFKCNSCVWEVV 415 (465)
Q Consensus 404 G~~~~~~v~~~~ 415 (465)
||+|+++++|+.
T Consensus 376 G~t~~~~ll~~~ 387 (393)
T PLN03172 376 GLTVETVVLHSV 387 (393)
T ss_pred cceeeeeeeEec
Confidence 999999999994
No 9
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=1.8e-51 Score=421.92 Aligned_cols=346 Identities=35% Similarity=0.535 Sum_probs=264.5
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhhccC--CcchHHHHHHHHHHcCccceEeecC--ccccC------CCCCCCh
Q 039047 30 ECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNL--GLNEYKFLLKAIVSSGIGEQTYSPR--IMFAG------REDNPTL 99 (465)
Q Consensus 30 ~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~--~~~~~~f~~ki~~~sGI~~r~~~~~--~~~~~------~~~~~t~ 99 (465)
.+||.+++.|+|++ +++|+++.+++...... .+...++++++++++||++|+++.+ ..... +.-..+.
T Consensus 1 ~~~I~~~~~~~P~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (361)
T cd00831 1 AATILAIGTAVPPH--RVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERN 78 (361)
T ss_pred CcEEEEEEEeCCCC--cCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcch
Confidence 37899999999997 89999999988643211 1234556789999999999999876 22111 0001256
Q ss_pred hhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHH
Q 039047 100 QDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVR 179 (465)
Q Consensus 100 ~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~ 179 (465)
..+.+++.+|+.+|+++||+++|++|+|||+||++++.++..|+++.+|+++||+++++.+||++++||+|++.||++|.
T Consensus 79 ~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~ 158 (361)
T cd00831 79 DIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAK 158 (361)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHH
Confidence 67889999999999999999999999999999998776788999999999999998779999999779999999999999
Q ss_pred HHHhcCCCCEEEEEEecCCCCCCCCCCC-ccchhhhhhccccceEEEEecCCcccc--ccceeeeceEEeeeCCCCCCCc
Q 039047 180 SVFKTYKNMNAMVVTSESLSPNWYSGND-RSMILANCLFRSGGAVILLSNKRSLER--NALFKLKCLVRTHHGARDDSYG 256 (465)
Q Consensus 180 ~ll~~g~~~~aLVV~~E~~s~~~~~~~d-r~~~~~~~lfgDGaaA~lLs~~~~~~~--~~~~~L~~~~~t~~~sd~~~~~ 256 (465)
+++++++.++||||++|.+|. ++++.| +.+++++++|||||+|+||++.+.... ...+++.+....... + ...
T Consensus 159 ~~~~~~~~~~aLvv~~e~~s~-~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p-~--~~~ 234 (361)
T cd00831 159 DLLEANPGARVLVVSTELCSL-WYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLP-D--SED 234 (361)
T ss_pred HHHHHCCCCEEEEEEeecccc-eeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeee-c--CCC
Confidence 999999999999999999998 556666 666667899999999999998765321 122333322111111 1 101
Q ss_pred cceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCc--CCCCCccCCccE
Q 039047 257 CCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEK--KAGVNFRTGVDH 334 (465)
Q Consensus 257 ~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~--g~~~~~~~did~ 334 (465)
.+-....+.+ ..+.++++++.. +...+..+.++++ +++ |+. .+||||
T Consensus 235 ~~~~~~~~~~-~~~~~~~~v~~~----------------------~~~~~~~~i~~~L-----~~~~~g~~---~~did~ 283 (361)
T cd00831 235 AMGWHLGEEG-LTFVLSRDVPRL----------------------VEKNLERVLRKLL-----ARLGIGLF---KLAFDH 283 (361)
T ss_pred ceEEEEEcce-EEEEeChhHHHH----------------------HHHHHHHHHHHHh-----ccccCCCc---cccceE
Confidence 0000000001 111122222211 1111222333444 456 777 589999
Q ss_pred EEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeee
Q 039047 335 FCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVW 412 (465)
Q Consensus 335 ~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~ 412 (465)
|++||+|+++++.+++.||++++++.+|+.++++||||||+|+|++|++++++|++++||+|++++||+|++|++++|
T Consensus 284 ~~~H~~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 284 WCVHPGGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred EEECCCChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 999999999999999999999999998999999999999999999999999999999999999999999999999986
No 10
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=9.8e-51 Score=418.65 Aligned_cols=352 Identities=20% Similarity=0.252 Sum_probs=266.0
Q ss_pred CCCceEEEeeeeecCCCCCccCHHHHHHHHHhhcc--CCcchHHHHHHHHHHcCccceEeecCcc---cc---CCCCCC-
Q 039047 27 RDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKN--LGLNEYKFLLKAIVSSGIGEQTYSPRIM---FA---GREDNP- 97 (465)
Q Consensus 27 r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~--~~~~~~~f~~ki~~~sGI~~r~~~~~~~---~~---~~~~~~- 97 (465)
...+++|+++|+..|++ +++++++.+.+.+... ..+...+.++++++++||++|+.+-+.. .+ .++..|
T Consensus 13 ~~~~~~i~~i~ta~P~~--~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~ 90 (391)
T PLN03173 13 AEGPATIMAIGTSTPPN--CVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPS 90 (391)
T ss_pred CCCCeEEEEEEccCCCc--ccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCC
Confidence 34579999999999997 8999999999876542 1232334478899999999998754221 11 011112
Q ss_pred ---ChhhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceee-eecCCcchHHHH
Q 039047 98 ---TLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVF-NLTGMGCSASLI 173 (465)
Q Consensus 98 ---t~~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~-~l~~~gCs~~~~ 173 (465)
++..+.+++.+|+.+|+++||+++|++++|||+||+++++....|+++.+|+++||+++++..+ +++ +||+|++.
T Consensus 91 ~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~ 169 (391)
T PLN03173 91 LDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQ-QGCFAGGT 169 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhc-CccHHHHH
Confidence 3556889999999999999999999999999999987644445899999999999999777554 556 79999999
Q ss_pred HHHHHHHHHhcCCCCEEEEEEecCCCCCCCCCCCc--cchhhhhhccccceEEEEecCCccc-cccceeeeceEEeee-C
Q 039047 174 SVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDR--SMILANCLFRSGGAVILLSNKRSLE-RNALFKLKCLVRTHH-G 249 (465)
Q Consensus 174 al~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~~dr--~~~~~~~lfgDGaaA~lLs~~~~~~-~~~~~~L~~~~~t~~-~ 249 (465)
||++|++++++++.++||||++|.+|.+|+.+.|+ +.++++++|||||+|+||++.+... .++.|++.+...... .
T Consensus 170 aL~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~ 249 (391)
T PLN03173 170 VLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPD 249 (391)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecC
Confidence 99999999999999999999999999766555543 3456789999999999999854321 123466544322222 3
Q ss_pred CCCCCCccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCcc
Q 039047 250 ARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFR 329 (465)
Q Consensus 250 sd~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~ 329 (465)
+++. +...+. ..| .++.+++++|+.+.+.+.. +.++++ ++.|+. .
T Consensus 250 t~~~-~~~~i~---~~G-~~~~l~~~vp~~~~~~~~~----------------------~i~~~L-----~~~gl~---~ 294 (391)
T PLN03173 250 SDGA-IDGHLR---EVG-LTFHLLKDVPGLISKNVEK----------------------SLTEAF-----KPLGIS---D 294 (391)
T ss_pred Cccc-eeeEEE---cCc-eEEEEecHHHHHHHHHHHH----------------------HHHHHH-----HhcCCC---c
Confidence 3332 221111 122 2455667777654433221 223344 346666 4
Q ss_pred CCccEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHc----CCCCCC---CEEEEEeeC
Q 039047 330 TGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAK----KRLKKG---DRVLMISFG 402 (465)
Q Consensus 330 ~did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~----g~l~~G---d~vl~~sfG 402 (465)
.|||+|++||+|++|++.+++.|||+++++.+||++|++||||||+|+|++|++++++ +.+++| +++++++||
T Consensus 295 ~di~~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afG 374 (391)
T PLN03173 295 WNSLFWIAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFG 374 (391)
T ss_pred cccCeEEECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeC
Confidence 8999999999999999999999999999999999999999999999999999999853 444433 889999999
Q ss_pred chhhhheeeeEEEe
Q 039047 403 AGFKCNSCVWEVVR 416 (465)
Q Consensus 403 aG~~~~~~v~~~~~ 416 (465)
+||+++++++++..
T Consensus 375 pG~t~e~~ll~~~~ 388 (391)
T PLN03173 375 PGLTVETVVLHSVA 388 (391)
T ss_pred chHHHHHHHHhhcc
Confidence 99999999999844
No 11
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=1.3e-50 Score=418.10 Aligned_cols=352 Identities=18% Similarity=0.251 Sum_probs=261.1
Q ss_pred CCCceEEEeeeeecCCCCCccCHHHHHHHHHhhcc--CCcchHHHHHHHHHHcCccceEeecCc-ccc-CCC----CCC-
Q 039047 27 RDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKN--LGLNEYKFLLKAIVSSGIGEQTYSPRI-MFA-GRE----DNP- 97 (465)
Q Consensus 27 r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~--~~~~~~~f~~ki~~~sGI~~r~~~~~~-~~~-~~~----~~~- 97 (465)
...+.+|+++|+..|++ .++|+++.+.+.+... ..+...+.++++++++||++|+.+-+. ... .++ ..|
T Consensus 12 ~~~~~~i~~i~ta~P~~--~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps 89 (389)
T PLN03168 12 AEGPACVLGIGTAVPPA--EFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPS 89 (389)
T ss_pred CCCCeEEEEEeccCCCc--ccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCC
Confidence 34579999999999997 8999999999876542 122233447789999999999875422 111 010 112
Q ss_pred ---ChhhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCc-eeeeecCCcchHHHH
Q 039047 98 ---TLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDI-KVFNLTGMGCSASLI 173 (465)
Q Consensus 98 ---t~~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~-~~~~l~~~gCs~~~~ 173 (465)
.++.+.+++.+|+.+|+++||+++|++++|||+||++|++.+..|+++.+|+++||+++.+ ++++++ +||+|++.
T Consensus 90 ~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~ 168 (389)
T PLN03168 90 LNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGAS 168 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHH
Confidence 3556889999999999999999999999999999998654466999999999999999765 478888 79999999
Q ss_pred HHHHHHHHHhcCCCCEEEEEEecCCCCCCCCCCC--ccchhhhhhccccceEEEEecCCccc-cccceeeeceEEeeeC-
Q 039047 174 SVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGND--RSMILANCLFRSGGAVILLSNKRSLE-RNALFKLKCLVRTHHG- 249 (465)
Q Consensus 174 al~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~~d--r~~~~~~~lfgDGaaA~lLs~~~~~~-~~~~~~L~~~~~t~~~- 249 (465)
||++|++++++++.++||||++|.+|.+|....+ .+.+++.++|||||+|+||++.+... .+..+++.....+.+.
T Consensus 169 aL~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~ 248 (389)
T PLN03168 169 VLRVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPE 248 (389)
T ss_pred HHHHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcC
Confidence 9999999999999999999999999987643222 33456789999999999999865321 1123443322222222
Q ss_pred CCCCCCccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCcc
Q 039047 250 ARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFR 329 (465)
Q Consensus 250 sd~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~ 329 (465)
+++ ... +..++.| ..+.+.+++|+...+++. .+.++.++ ..+.. .
T Consensus 249 s~~-~~~---~~~~~~g-~~~~l~~~vp~~i~~~~~----------------------~~l~~~l~-----~~~~~---~ 293 (389)
T PLN03168 249 SDG-AID---GHLTEAG-LIFHLMKDVPGLISKNIE----------------------KFLNEARK-----CVGSP---D 293 (389)
T ss_pred CCC-ccC---ceEecCc-eEEEECHHHHHHHHHHHH----------------------HHHHHHHH-----hcCCC---c
Confidence 221 111 1111122 234455555554333221 12223332 23443 2
Q ss_pred CCccEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCC--------CEEEEEee
Q 039047 330 TGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKG--------DRVLMISF 401 (465)
Q Consensus 330 ~did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~G--------d~vl~~sf 401 (465)
.|+++|++||+|++|++.++++|||+++++..||.+|++||||||+|+|++|++++++ ++++| |++++++|
T Consensus 294 ~d~~~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~af 372 (389)
T PLN03168 294 WNEMFWAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGF 372 (389)
T ss_pred cccceEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEE
Confidence 5778999999999999999999999999999999999999999999999999998865 55554 89999999
Q ss_pred CchhhhheeeeEEEec
Q 039047 402 GAGFKCNSCVWEVVRD 417 (465)
Q Consensus 402 GaG~~~~~~v~~~~~~ 417 (465)
|+||+|+++++||..+
T Consensus 373 GpG~t~~~~llr~~~~ 388 (389)
T PLN03168 373 GPGLTLEVLVLRAAAN 388 (389)
T ss_pred cchhhhhhhhheeccc
Confidence 9999999999999543
No 12
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=2.1e-50 Score=417.21 Aligned_cols=350 Identities=17% Similarity=0.260 Sum_probs=260.1
Q ss_pred cCCCceEEEeeeeecCCCCCccCHHHHHHHHHhhcc-CCcchHHHHHHHHHHcCccceEeecCcc-cc-----CCCCCCC
Q 039047 26 KRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKN-LGLNEYKFLLKAIVSSGIGEQTYSPRIM-FA-----GREDNPT 98 (465)
Q Consensus 26 ~r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~-~~~~~~~f~~ki~~~sGI~~r~~~~~~~-~~-----~~~~~~t 98 (465)
+.|.+++|+++|+|+|++ +++|+++.+.+..... .++...+.++|+++++||++|+++.+.. .+ ..+..++
T Consensus 17 ~~~~~~~I~gigt~~P~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 94 (391)
T PLN03169 17 ANPGKATILALGKAFPSQ--LVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTPT 94 (391)
T ss_pred CCCCCeEEEEEEeeCCCe--ecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCCC
Confidence 577889999999999997 8999999986554221 1222234467899999999999875311 00 0011123
Q ss_pred h----hhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCc-eeeeecCCcchHHHH
Q 039047 99 L----QDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDI-KVFNLTGMGCSASLI 173 (465)
Q Consensus 99 ~----~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~-~~~~l~~~gCs~~~~ 173 (465)
+ ..+.|.+.+|+.+|+++||+++|++|+|||+||++|++++..|+++..|+++||+++++ .+++++ +||+|++.
T Consensus 95 ~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g~~~ 173 (391)
T PLN03169 95 IKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSGGVA 173 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHHHHH
Confidence 3 33688999999999999999999999999999998777889999999999999998776 479999 69999999
Q ss_pred HHHHHHHHHhcCCCCEEEEEEecCCCCCCCCCCC--ccchhhhhhccccceEEEEecCCccc-cccceeeeceEEeeeCC
Q 039047 174 SVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGND--RSMILANCLFRSGGAVILLSNKRSLE-RNALFKLKCLVRTHHGA 250 (465)
Q Consensus 174 al~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~~d--r~~~~~~~lfgDGaaA~lLs~~~~~~-~~~~~~L~~~~~t~~~s 250 (465)
||++|.+++++++.++||||++|.+|..+....+ ....+..++|||||+|+||++.+... ....+++.......+.
T Consensus 174 aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~ip- 252 (391)
T PLN03169 174 GLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFLP- 252 (391)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEcC-
Confidence 9999999999999999999999999876543211 12334578999999999999865420 1123333221111111
Q ss_pred CCCCCccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHH---HHHhccCCcCCcCCCCC
Q 039047 251 RDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFV---RKMSNNTPKGEKKAGVN 327 (465)
Q Consensus 251 d~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~---~~~l~~~~l~~~g~~~~ 327 (465)
++. ..+-......| ..+.+++++ ++++...++ ++++ +++|+.
T Consensus 253 ~~~--~~~~~~~~~~g-~~~~~g~~v-------------------------~~~~~~~~~~~i~~~L-----~~~gl~-- 297 (391)
T PLN03169 253 GTE--KTIDGRLTEEG-INFKLGREL-------------------------PQKIEDNIEGFCKKLM-----KKAGLV-- 297 (391)
T ss_pred CCc--cccCceecCCc-eEEEECcHH-------------------------HHHHHHHHHHHHHHHH-----HHcCCC--
Confidence 100 00000000111 112333333 344333333 3444 456777
Q ss_pred ccCCcc--EEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCC---CCCEEEEEeeC
Q 039047 328 FRTGVD--HFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLK---KGDRVLMISFG 402 (465)
Q Consensus 328 ~~~did--~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~---~Gd~vl~~sfG 402 (465)
.+|+| +|++||+|++|++.+++.||++++++.+||+++++||||||+|+|++|++++++++++ +||++++++||
T Consensus 298 -~~did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG 376 (391)
T PLN03169 298 -EKDYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFG 376 (391)
T ss_pred -CCCCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEc
Confidence 36788 9999999999999999999999999998999999999999999999999999888776 69999999999
Q ss_pred chhhhheeeeEEE
Q 039047 403 AGFKCNSCVWEVV 415 (465)
Q Consensus 403 aG~~~~~~v~~~~ 415 (465)
+||+|+++++|+.
T Consensus 377 ~G~s~~~~ll~~~ 389 (391)
T PLN03169 377 PGITFEGILARNL 389 (391)
T ss_pred ccHhHHHHHHhhh
Confidence 9999999999984
No 13
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=1e-49 Score=412.60 Aligned_cols=352 Identities=17% Similarity=0.225 Sum_probs=265.3
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhccC-Ccc-hHHHHHHHHHHcCccceEeecCc-cccC-CC----CCC---
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNL-GLN-EYKFLLKAIVSSGIGEQTYSPRI-MFAG-RE----DNP--- 97 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~-~~~-~~~f~~ki~~~sGI~~r~~~~~~-~~~~-~~----~~~--- 97 (465)
.+.+|+++|+..|++ .++++++.+.+.+.... +.+ ..+.++++++++||++|+.+-+. .... ++ ..|
T Consensus 19 ~~~~i~~i~ta~P~~--~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 96 (401)
T PLN03170 19 GPATVLAIGTATPAN--CVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLD 96 (401)
T ss_pred CCeEEEEEeecCCCc--cccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHH
Confidence 468999999999997 89999999998775421 222 33347889999999999875521 1110 00 112
Q ss_pred -ChhhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCc-eeeeecCCcchHHHHHH
Q 039047 98 -TLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDI-KVFNLTGMGCSASLISV 175 (465)
Q Consensus 98 -t~~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~-~~~~l~~~gCs~~~~al 175 (465)
.+..+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++.+ ++++++ +||+|++.||
T Consensus 97 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~aL 175 (401)
T PLN03170 97 ARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTVL 175 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHHH
Confidence 3556889999999999999999999999999999987654555999999999999999765 478888 7999999999
Q ss_pred HHHHHHHhcCCCCEEEEEEecCCCCCCCCCCC--ccchhhhhhccccceEEEEecCCccc-cccceeeeceEEeeeCCCC
Q 039047 176 DIVRSVFKTYKNMNAMVVTSESLSPNWYSGND--RSMILANCLFRSGGAVILLSNKRSLE-RNALFKLKCLVRTHHGARD 252 (465)
Q Consensus 176 ~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~~d--r~~~~~~~lfgDGaaA~lLs~~~~~~-~~~~~~L~~~~~t~~~sd~ 252 (465)
++|.+++++++.++||||++|.+|.++..+.+ .+.+++.++|||||+|+||++.+... ..+.|++.... +.+..+.
T Consensus 176 ~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~-~~~~p~~ 254 (401)
T PLN03170 176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSAS-QTILPDS 254 (401)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeecc-ceEecCC
Confidence 99999999999999999999999987644332 23456688999999999999865421 11234543321 1111111
Q ss_pred CCCccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCc
Q 039047 253 DSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGV 332 (465)
Q Consensus 253 ~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~di 332 (465)
+.+ +-+...+.| ..+.+++++|+.+.+.+.. +.++++ +++|+. ..|+
T Consensus 255 ~~~--~~~~i~~~G-~~~~l~~~vp~~~~~~i~~----------------------~v~~~L-----~~~gl~---~~di 301 (401)
T PLN03170 255 EGA--IDGHLREVG-LTFHLLKDVPGLISKNIER----------------------SLEEAF-----KPLGIT---DYNS 301 (401)
T ss_pred ccc--ccceEEcCC-eEEEEehHHHHHHHHHHHH----------------------HHHHHH-----HhcCCC---cccc
Confidence 111 100111122 1345566666654433221 223344 346666 4789
Q ss_pred cEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHH----HcCCCCCC---CEEEEEeeCchh
Q 039047 333 DHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYME----AKKRLKKG---DRVLMISFGAGF 405 (465)
Q Consensus 333 d~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~----~~g~l~~G---d~vl~~sfGaG~ 405 (465)
++|++||+|++|++.+++.||++++++.+||+++++||||||+|++++|+++. ++|++++| |++++++||+||
T Consensus 302 ~~~v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~ 381 (401)
T PLN03170 302 IFWVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGL 381 (401)
T ss_pred CeEEecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchH
Confidence 99999999999999999999999999999999999999999999999999987 46888888 899999999999
Q ss_pred hhheeeeEEEec
Q 039047 406 KCNSCVWEVVRD 417 (465)
Q Consensus 406 ~~~~~v~~~~~~ 417 (465)
+|+++++++...
T Consensus 382 t~~~~ll~~~~~ 393 (401)
T PLN03170 382 TVETVVLHSVPI 393 (401)
T ss_pred hHHhHHheeccc
Confidence 999999999443
No 14
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=6.9e-49 Score=406.63 Aligned_cols=357 Identities=18% Similarity=0.255 Sum_probs=259.1
Q ss_pred CCCceEEEeeeeecCCCCCccCHHHHHHHHHhhcc-CC-cchHHHHHHHHHHcCccceEeecCcc-cc-CCC----CCC-
Q 039047 27 RDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKN-LG-LNEYKFLLKAIVSSGIGEQTYSPRIM-FA-GRE----DNP- 97 (465)
Q Consensus 27 r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~-~~-~~~~~f~~ki~~~sGI~~r~~~~~~~-~~-~~~----~~~- 97 (465)
.+.+++|+++|+|+|++ +++|+++.+++..... .+ ++..+.+++|++++||++|+++.++. .. .++ ..|
T Consensus 19 ~~~~~~I~gigt~~P~~--~v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 96 (399)
T PLN03171 19 ADGLAAVLAIGTANPAN--CVPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPS 96 (399)
T ss_pred CCCCcEEEEEEeeCCCc--ccCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCC
Confidence 34679999999999997 8999999998643211 01 11233467899999999999887542 00 000 012
Q ss_pred ---ChhhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCce-eeeecCCcchHHHH
Q 039047 98 ---TLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIK-VFNLTGMGCSASLI 173 (465)
Q Consensus 98 ---t~~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~-~~~l~~~gCs~~~~ 173 (465)
++..+.+.+.+|+++|+++||+++|++|+|||+||++|+.....|+++.+|+++||+++.+. .+++. +||+|++.
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~-~gC~g~~~ 175 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGAA 175 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccC-CccHHHHH
Confidence 35557889999999999999999999999999999976444458999999999999986553 56666 59999999
Q ss_pred HHHHHHHHHhcCCCCEEEEEEecCCCCCCCCCCCc---cchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCC
Q 039047 174 SVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDR---SMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGA 250 (465)
Q Consensus 174 al~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~~dr---~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~s 250 (465)
||++|.+++++++.++||||++|.+|..+ ++.|+ ..++.+++|||||+|+||++.+....+..+++.......
T Consensus 176 aL~~A~~li~~~~~~~vLVv~~e~~s~~~-~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~--- 251 (399)
T PLN03171 176 ALRLAKDLAENNRGARVLVVAAEITLLLF-NGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQAI--- 251 (399)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEecccccc-CCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeEE---
Confidence 99999999999999999999999999854 33333 345567899999999999986543212345554322222
Q ss_pred CCCCCccceeccCCCCCCceecC-CChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCcc
Q 039047 251 RDDSYGCCVQTEDEQGRPGFHLG-KNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFR 329 (465)
Q Consensus 251 d~~~~~~~~~~~d~~G~~g~~l~-~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~ 329 (465)
++...+.+.+...+.|.. ..++ +.+|+...+.++.. .++.+...+....|+. .
T Consensus 252 ~p~~~~~~~~~~~~~g~~-~~~~~~~vp~~i~~~l~~~----------------------l~~~l~~~~~~~~g~~---~ 305 (399)
T PLN03171 252 IPESDDAINMHFTEGGLD-GNIGTRQVPGLIGDNIERC----------------------LLDAFAPLLGGDGGAE---W 305 (399)
T ss_pred ecCCchheEEEEEcCCce-EEECchhHHHHHHHHHHHH----------------------HHHHHHhhcccccCCC---c
Confidence 222323332211112221 2333 55555443322211 1111110001223454 4
Q ss_pred CCccEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCC--CCCC---CEEEEEeeCch
Q 039047 330 TGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKR--LKKG---DRVLMISFGAG 404 (465)
Q Consensus 330 ~did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~--l~~G---d~vl~~sfGaG 404 (465)
+|++++ +||+|++|++.+.++||++++++..||.++++||||||+|+|++|++++++++ +++| |+|++++||+|
T Consensus 306 ~di~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~G 384 (399)
T PLN03171 306 NDLFWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGPG 384 (399)
T ss_pred ccceEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEccc
Confidence 788765 69999999999999999999999999999999999999999999999988763 6888 99999999999
Q ss_pred hhhheeeeEEEec
Q 039047 405 FKCNSCVWEVVRD 417 (465)
Q Consensus 405 ~~~~~~v~~~~~~ 417 (465)
|+|++++|++.+.
T Consensus 385 lt~~~~ll~~~~~ 397 (399)
T PLN03171 385 LTVDAMLLHASGH 397 (399)
T ss_pred HHHHHHHhhcccC
Confidence 9999999998654
No 15
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.5e-49 Score=379.06 Aligned_cols=347 Identities=21% Similarity=0.261 Sum_probs=278.7
Q ss_pred eEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHH-HcCccceEeecCccccCCCCC--CChhhhhhhHH
Q 039047 31 CYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIV-SSGIGEQTYSPRIMFAGREDN--PTLQDGIDEME 107 (465)
Q Consensus 31 v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~-~sGI~~r~~~~~~~~~~~~~~--~t~~~~~~e~~ 107 (465)
.+|.++++++|++ ++.|.|+.+.+.... ..+..+-+.+.+. +.+|.+|+.+.|..++..+.. -.++-+.|++.
T Consensus 2 a~i~sv~t~~Ppy--~~~Qse~~d~f~~~~--~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~ 77 (356)
T COG3424 2 AVIASVATALPPY--RYNQSEITDSFAELP--FQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAV 77 (356)
T ss_pred ceeeecccCCCcc--ccchHHHHHHHHHhc--cccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHH
Confidence 4799999999997 899988888776543 2233566667777 778888887777766532211 13455899999
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCC
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKN 187 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~ 187 (465)
.++++|+++||+.+++.|+|||+|++.++++...|++.++|+++||+++++..+.+.+|||+++..++..|+++++++|.
T Consensus 78 ~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~ 157 (356)
T COG3424 78 PLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPD 157 (356)
T ss_pred HHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCcc
Confidence 99999999999999999999999999887788899999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEecCCCCCCCCCCC-ccchhhhhhccccceEEEEecCCccccc--cceeeeceEEeeeCCCCCCCccceeccCC
Q 039047 188 MNAMVVTSESLSPNWYSGND-RSMILANCLFRSGGAVILLSNKRSLERN--ALFKLKCLVRTHHGARDDSYGCCVQTEDE 264 (465)
Q Consensus 188 ~~aLVV~~E~~s~~~~~~~d-r~~~~~~~lfgDGaaA~lLs~~~~~~~~--~~~~L~~~~~t~~~sd~~~~~~~~~~~d~ 264 (465)
.+|||||.|.||.++....+ ++.+++..+||||+||+|++.+....++ .+..+.+. +++...|++ +.+-+...+
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s-~StL~~dse--~~Mgwdv~d 234 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDS-FSTLYPDSE--DIMGWDVGD 234 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceeccc-ccccCCccc--cccceeecC
Confidence 99999999999998655443 3478889999999999999986542221 12222221 122222221 223344434
Q ss_pred CCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHH
Q 039047 265 QGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAV 344 (465)
Q Consensus 265 ~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~i 344 (465)
+|. .+.||+|+|......++.|.+++ + ...++. .+||++|+.|+||++|
T Consensus 235 ~G~-~~vlSrdlp~lIe~~l~~~V~~f----------------------L-----~~~~ls---~~dI~~w~~HPGG~KV 283 (356)
T COG3424 235 QGL-KVVLSRDLPNLIESYLAPNVTTF----------------------L-----ATHGLS---IEDIEAWVVHPGGPKV 283 (356)
T ss_pred CcE-EEEEcCchhHHHHHHhhhhHHHH----------------------H-----HHcCCc---hhhhceeeeCCCCchH
Confidence 442 34689999998777666554432 2 234556 6999999999999999
Q ss_pred HHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeeeEEEe
Q 039047 345 IDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVR 416 (465)
Q Consensus 345 i~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~~~ 416 (465)
++++.+.|||+++.++.||..|++|||+||++++++|.++++++ .++|.+.+|++||+||+....+++|.+
T Consensus 284 ida~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 284 IDAYEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 99999999999999999999999999999999999999999986 689999999999999999999999864
No 16
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.6e-48 Score=398.43 Aligned_cols=334 Identities=16% Similarity=0.204 Sum_probs=255.5
Q ss_pred CCCceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhH
Q 039047 27 RDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEM 106 (465)
Q Consensus 27 r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~ 106 (465)
+.++++|++++.|+|++ +++++++.+... .. .....+|+.+.+||.+|+++.++ +++
T Consensus 4 ~~~~~~I~~~g~~lP~~--~v~~~~~~~~~~-----~~-~~~~~~~i~~~~Gi~~R~~~~~~---------------e~~ 60 (353)
T PRK12880 4 RFDKAKISGICVSVPEH--KICIDDELESVF-----SN-DIKTLKRMKKVIGLNTRYICDEN---------------TCV 60 (353)
T ss_pred cccccEEEEEEEECCCe--EecHHHHHHHhc-----Cc-chhhhhhhhhccCceEEEeCCCC---------------CCH
Confidence 56789999999999997 899997554321 11 11224678889999999987642 135
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcC
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTY 185 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g 185 (465)
.+|+.+|+++||+++|++++|||+||++| ++++..|+++.+|+++||+++++.+||++ .||+|++.||++|+++++++
T Consensus 61 ~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~ 139 (353)
T PRK12880 61 SDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSG 139 (353)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcC
Confidence 69999999999999999999999999875 67999999999999999998889999998 59999999999999999999
Q ss_pred CCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCCC
Q 039047 186 KNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQ 265 (465)
Q Consensus 186 ~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~ 265 (465)
+.+ ||||++|.+|.. .++.|+.. ..+|||||+|+||++.+... . . ..+.++++.++.+..+.++.
T Consensus 140 ~~~-~LVv~~e~~S~~-~~~~d~~~---~~lFGDGAaA~vl~~~~~~~---~-----~--~~~~~~~~~~~~~~~p~g~~ 204 (353)
T PRK12880 140 LGK-ILLICGDTLSKF-IHPKNMNL---APIFGDGVSATLIEKTDFNE---A-----F--FELGSDGKYFDKLIIPKGAM 204 (353)
T ss_pred CCC-EEEEEehhhhcc-CCcccCCc---eeeecccceEEEEEecCCCC---c-----e--EEEEecCCCCCeEEecCCCc
Confidence 888 999999999985 34455543 67999999999999755321 1 1 23356666666665554321
Q ss_pred CCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHHH
Q 039047 266 GRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVI 345 (465)
Q Consensus 266 G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~ii 345 (465)
...+.....+..... ....+....+.|++.++++++...+++.+.+. |+++|+. .+|||+|++||+|++++
T Consensus 205 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~--L~~~gl~---~~did~~v~HQ~~~~i~ 275 (353)
T PRK12880 205 RIPKADIFNDDSLMQ----TEEFRQLENLYMDGANIFNMALECEPKSFKEI--LEFSKVD---EKDIAFHLFHQSNAYLV 275 (353)
T ss_pred CCCcccccccccccc----ccccccCceEEEcCHHHHHHHHHHHHHHHHHH--HHHcCCC---HHHCCEEEECCCCHHHH
Confidence 111110000000000 00011112244667888988887666433222 4567887 58999999999999999
Q ss_pred HHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeeeEE
Q 039047 346 DGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEV 414 (465)
Q Consensus 346 ~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~ 414 (465)
+.+.++||++++++. +.++++||||||+|+|++|++..++|+++ +++++||+|++|+++++|+
T Consensus 276 ~~i~~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~ 338 (353)
T PRK12880 276 DCIKEELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNF 338 (353)
T ss_pred HHHHHHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEE
Confidence 999999999999983 35689999999999999999999887764 9999999999999999999
No 17
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=6.4e-48 Score=390.13 Aligned_cols=323 Identities=15% Similarity=0.233 Sum_probs=248.8
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHHH
Q 039047 30 ECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEF 109 (465)
Q Consensus 30 ~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~l 109 (465)
+++|+++|+|+|+. +++++++.+..+. ++ +++.+++||++|+++.++ + .+.+|
T Consensus 3 ~~~I~~~g~~lP~~--~v~~~~~~~~~~~----~~------~~i~~~~Gi~~r~~~~~~-----e----------~~~~l 55 (326)
T PRK05963 3 SSRIAGFGHAVPDR--RVENAEIEAQLGL----ET------GWIERRTGIRCRRWAAPD-----E----------TLSDL 55 (326)
T ss_pred ccEEEEEEEECCCC--eecHHHHHHHcCC----CH------HHhhhccCCeEEEEcCCC-----C----------CHHHH
Confidence 58999999999997 8999999986521 11 356789999999987553 1 34699
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNM 188 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~ 188 (465)
+.+|+++||+++|++|+|||+||+++ ++++..|+.+.+|+++||++ ++.+||+++ +|+|++.||++|.++++++ .+
T Consensus 56 a~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~-~C~g~~~aL~~A~~~l~~~-~~ 132 (326)
T PRK05963 56 AASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAG-ACAGFLYALVLADGFVRAQ-GK 132 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccc-hhhHHHHHHHHHHHHHHcC-CC
Confidence 99999999999999999999999975 57788999999999999998 689999996 9999999999999999997 48
Q ss_pred EEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCCCCCC
Q 039047 189 NAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRP 268 (465)
Q Consensus 189 ~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~G~~ 268 (465)
+||||++|..|.. .++.++.. ..+|||||+|+||++++... . +++.+.+.++++.++.+..+.++..
T Consensus 133 ~aLVv~~d~~s~~-~~~~~~~~---~~lfGDgA~A~ll~~~~~~~----~---~~l~~~~~t~~~~~~~~~~~~gg~~-- 199 (326)
T PRK05963 133 PVLVVAANILSRR-INMAERAS---AVLFADAAGAVVLAPSAKAN----S---GVLGSQLISDGSHYDLIKIPAGGSA-- 199 (326)
T ss_pred eEEEEEechhhcc-CCccccCc---eEEEeecceEEEEEecCCCC----C---ceEEEEEEEcCCCCCeEEeCCCCcC--
Confidence 9999999998874 34444443 68999999999999866431 1 2334455666666664443332110
Q ss_pred ceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHHHHHH
Q 039047 269 GFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDGI 348 (465)
Q Consensus 269 g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~ii~~i 348 (465)
...+.+.. .+.. .+. ..++.++++++...+++.+.+. ++++|+. .+|||+|++||+|+.+++.+
T Consensus 200 -~~~~~~~~---~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~--L~~~gl~---~~did~~~~h~~~~~~~~~~ 263 (326)
T PRK05963 200 -RPFAPERD---ASEF--LMT-----MQDGRAVFTEAVRMMSGASQNV--LASAAMT---PQDIDRFFPHQANARIVDKV 263 (326)
T ss_pred -CCCccccc---cccc--ceE-----ecCCHHHHHHHHHHHHHHHHHH--HHHcCCC---HHHCCEEEeCCCCHHHHHHH
Confidence 00010000 0000 000 0112445555544444322221 3567888 48999999999999999999
Q ss_pred HhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeeeEE
Q 039047 349 GFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEV 414 (465)
Q Consensus 349 ~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~ 414 (465)
.+.||++++++ ..++++||||+|+|+|++|+++++++++++||+|++++||+|++|+++|+||
T Consensus 264 ~~~l~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 264 CETIGIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred HHHcCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 99999999998 5899999999999999999999999999999999999999999999999986
No 18
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=1.4e-47 Score=395.34 Aligned_cols=330 Identities=18% Similarity=0.253 Sum_probs=249.3
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHH
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEE 108 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~ 108 (465)
.+++|+++|.|+|++ +++++++.+.++. ++ .++.+++||++|+++.++ + .+.+
T Consensus 46 ~~~~I~g~g~~lP~~--~v~n~el~~~~~~----~~------~~i~~~tGi~~R~~~~~~-----~----------~~~~ 98 (379)
T PLN02326 46 SGSKLVGCGSAVPKL--LITNDDLSKLVDT----SD------EWIATRTGIRNRRVLSGD-----E----------TLTS 98 (379)
T ss_pred CCcEEEEEEEECCCc--eecHHHHHHhcCC----ch------hheecccCcceEeecCCC-----C----------CHHH
Confidence 368999999999997 8999999987531 11 357889999999887542 1 3569
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCC
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNM 188 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~ 188 (465)
|+.+|+++||+++|++++|||.||++++.....++.+..|+++||++ +++++++++ +|++++.||++|.++++++..+
T Consensus 99 La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~-~~~~~dv~~-~Ca~~~~aL~~A~~~l~~g~~~ 176 (379)
T PLN02326 99 LAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCT-NALAFDLTA-ACSGFVLGLVTAARFIRGGGYK 176 (379)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCC-CCceeeccc-cchHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999997653333456788999999998 799999994 9999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCCC---
Q 039047 189 NAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQ--- 265 (465)
Q Consensus 189 ~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~--- 265 (465)
+||||++|.+|. +.+++|+.. ..+|||||+|+||++.+.... .+..+.+.+++..++.+.....+.
T Consensus 177 ~vLVv~~e~~s~-~~~~~d~~~---~~lfGDGAaAvlL~~~~~~~~-------~i~~~~~~t~g~~~~~~~~~~~g~~~~ 245 (379)
T PLN02326 177 NVLVIGADALSR-YVDWTDRGT---CILFGDGAGAVVLQACDDDED-------GLLGFDMHSDGNGHKHLHATFKGEDDD 245 (379)
T ss_pred EEEEEEechhcC-CCCccccCc---eEEEcceeEEEEEEEcCCCCC-------ceEEEEEEEcCCCCCeEEecCCCCccc
Confidence 999999999987 445556553 469999999999998754311 122334445554444332221110
Q ss_pred CCCceec-CCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHH
Q 039047 266 GRPGFHL-GKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAV 344 (465)
Q Consensus 266 G~~g~~l-~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~i 344 (465)
+..+... ..+.+. ... ......+.+.++|+++...+++.+.+. |+++|+. .+|||||++||+|+.+
T Consensus 246 ~~~~~~~~~~~~~~--~~~------~~~~~~~~g~~v~~~~~~~~~~~i~~~--L~~~gl~---~~dId~~v~Hq~n~~~ 312 (379)
T PLN02326 246 SSGGNTNGVGDFPP--KKA------SYSCIQMNGKEVFKFAVRCVPQVIESA--LQKAGLT---AESIDWLLLHQANQRI 312 (379)
T ss_pred cccccccccccccc--ccc------cccceEecCHHHHHHHHHHHHHHHHHH--HHHcCCC---HHHCCEEEECCCCHHH
Confidence 0000000 000000 000 000122344677887776655432221 3567887 5899999999999999
Q ss_pred HHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeeeEE
Q 039047 345 IDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEV 414 (465)
Q Consensus 345 i~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~ 414 (465)
++.+++.||++++++ ..++++||||+|||+|++|++++++|++++||+|++++||+||+|++++++|
T Consensus 313 ~~~~~~~Lgl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 313 IDAVAQRLGIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HHHHHHHcCCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 999999999999999 4789999999999999999999999999999999999999999999999985
No 19
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=6.3e-47 Score=383.08 Aligned_cols=323 Identities=18% Similarity=0.278 Sum_probs=244.1
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHHH
Q 039047 30 ECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEF 109 (465)
Q Consensus 30 ~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~l 109 (465)
.++|+++|.|+|++ +|+++|+.+.++. + . .++.+++||++|++..++ + ...+|
T Consensus 2 ~v~I~~~g~~lP~~--~v~~~e~~~~~~~----~--~----~~i~~~~gi~~r~~~~~~-----~----------~~~~l 54 (326)
T CHL00203 2 GVHILSTGSSVPNF--SVENQQFEDIIET----S--D----HWISTRTGIKKRHLAPSS-----T----------SLTKL 54 (326)
T ss_pred ccEEEEEEEECCCe--EEcHHHHHHhcCC----C--h----hhEeeccCeEEEEeCCCC-----C----------CHHHH
Confidence 58999999999997 8999999987641 1 1 256789999999876643 1 35689
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNM 188 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~ 188 (465)
+.+|+++||+++|++|+|||.||+++ ++... +..+..++++||++ +++++++++ +|++++.||.+|.++++++..+
T Consensus 55 a~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~-~~~~~~v~~~Lg~~-~~~~~~v~~-~Casg~~al~~A~~~i~sg~~~ 131 (326)
T CHL00203 55 AAEAANKALDKAHMDPLEIDLIILATSTPDDL-FGSASQLQAEIGAT-RAVAFDITA-ACSGFILALVTATQFIQNGSYK 131 (326)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CchHHHHHHHhCCC-CCceeeecc-cchhHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999976 44433 34578899999998 688999994 9999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCCCCCC
Q 039047 189 NAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRP 268 (465)
Q Consensus 189 ~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~G~~ 268 (465)
++|||++|.+|.. .++.++.. ..+|||||+|+||++.+.. .+......++++.+........+....
T Consensus 132 ~~Lvv~~e~~s~~-~~~~~~~~---~~~fgDga~A~ll~~~~~~---------~~~~~~~~t~g~~~~~~~~~~~~~~~~ 198 (326)
T CHL00203 132 NILVVGADTLSKW-IDWSDRKT---CILFGDGAGAAIIGASYEN---------SILGFKLCTDGKLNSHLQLMNKPVNNQ 198 (326)
T ss_pred EEEEEEehhhhCc-CCcccCCc---eEEEcceeeEEEEEEcCCC---------CeEEEEEEEcCCCcceEEecCCCCCcc
Confidence 9999999999974 44455432 6799999999999986542 122233445554444332211110000
Q ss_pred ceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHHHHHH
Q 039047 269 GFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDGI 348 (465)
Q Consensus 269 g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~ii~~i 348 (465)
.+.- ...|.... .. ..+.+.++++++...+++.+.+. |+++|++ .+|||||++||+|+++++.+
T Consensus 199 ~~~~-~~~~~~~~----~~------~~~~g~~~~~~~~~~~~~~i~~~--L~~~g~~---~~did~~~~hq~~~~~~~~~ 262 (326)
T CHL00203 199 SFGT-TKLPQGQY----QS------ISMNGKEVYKFAVFQVPAVIIKC--LNALNIS---IDEVDWFILHQANKRILEAI 262 (326)
T ss_pred cccc-cccccCCc----ce------EEECCHHHHHHHHHHHHHHHHHH--HHHcCCC---HHHCCEEEECCCCHHHHHHH
Confidence 0000 00010000 01 12234566666554443322111 3567887 58999999999999999999
Q ss_pred HhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeeeEE
Q 039047 349 GFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEV 414 (465)
Q Consensus 349 ~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~ 414 (465)
++.||+|++++ ..++++||||+|||+|++|++++++|++++||+|++++||+|++|+++|+||
T Consensus 263 ~~~lgl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~ 325 (326)
T CHL00203 263 ANRLSVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKW 325 (326)
T ss_pred HHHhCCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 99999999999 5799999999999999999999999999999999999999999999999998
No 20
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=8.2e-46 Score=374.22 Aligned_cols=318 Identities=19% Similarity=0.285 Sum_probs=249.6
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHH
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEE 108 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~ 108 (465)
++++|.++++|+|+. +++++++.+..+. +. +++.+++||++|++..++ +...+
T Consensus 3 ~~~~I~~ig~~~P~~--~v~~~e~~~~~~~----~~------~~i~~~~Gi~~r~~~~~~---------------~~~~~ 55 (325)
T PRK12879 3 SYARITGIGTYVPPR--VLTNDDLETFIDT----SD------EWIVQRTGIKERRIAHVE---------------EYTSD 55 (325)
T ss_pred CCCEEEEEEEECCCc--EEcHHHHHHhcCC----CH------HHhhhccCceEEEECCCC---------------CCHHH
Confidence 468999999999997 8999999986531 11 257789999999987543 13569
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCC
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKN 187 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~ 187 (465)
|+.+|+++||+++|+++++||.||+++ ++++..|+.+.+|+++||++ +++.++++ ++|++++.||.+|.++|++|+.
T Consensus 56 la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~ 133 (325)
T PRK12879 56 LAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLY 133 (325)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999875 56778899999999999997 58999999 5999999999999999999999
Q ss_pred CEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCCCCC
Q 039047 188 MNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGR 267 (465)
Q Consensus 188 ~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~G~ 267 (465)
++||||++|.+|.. ....++.. .++|||||+|+||++++... .+..+...++++.++.++.+.. |
T Consensus 134 ~~~Lvv~~e~~s~~-~~~~~~~~---~~~~GDgAaA~ll~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~--~- 198 (325)
T PRK12879 134 KKVLVIGAERLSKV-TDYTDRTT---CILFGDGAGAVVLEATENEP--------GFIDYVLGTDGDGGDILYRTGL--G- 198 (325)
T ss_pred CEEEEEEehhhcCc-CCccccCc---eEEEeecceEEEEEecCCCC--------CeEEEEEEEcCCCCCeEEEcCC--C-
Confidence 99999999998873 33344443 57999999999999876531 2334455566655554443221 1
Q ss_pred CceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHH---HHHhccCCcCCcCCCCCccCCccEEEecCCCHHH
Q 039047 268 PGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFV---RKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAV 344 (465)
Q Consensus 268 ~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~---~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~i 344 (465)
.....+.. ... ....+++.++++++...++ ++++ +++|+. ++|||+|++||+|+++
T Consensus 199 --~~~~~~~~-----~~~------~~~~~~~~~~~~~~~~~~~~~i~~~L-----~~~g~~---~~did~~~~h~~~~~~ 257 (325)
T PRK12879 199 --TTMDRDAL-----SGD------GYIVQNGREVFKWAVRTMPKGARQVL-----EKAGLT---KDDIDWVIPHQANLRI 257 (325)
T ss_pred --CCCCcccc-----ccC------ccEEEcCHHHHHHHHHHHHHHHHHHH-----HHcCCC---HHHCCEEEECCCCHHH
Confidence 11110000 000 0112223456665554443 3444 557777 5899999999999999
Q ss_pred HHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeeeEE
Q 039047 345 IDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEV 414 (465)
Q Consensus 345 i~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~ 414 (465)
++.+.+.||++++++. .++++|||++|+|+|++|++++++|++++||+|++++||+|++|+++++||
T Consensus 258 ~~~~~~~lg~~~~~~~---~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~ 324 (325)
T PRK12879 258 IESLCEKLGIPMEKTL---VSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKW 324 (325)
T ss_pred HHHHHHHcCCCHHHhh---hhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEe
Confidence 9999999999999984 689999999999999999999999999999999999999999999999998
No 21
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.1e-45 Score=374.31 Aligned_cols=322 Identities=14% Similarity=0.196 Sum_probs=244.3
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHH
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEE 108 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~ 108 (465)
+.++|.+++.|+|++ +++++++.+..+. .. +++.+++||++|+++. + + ...+
T Consensus 3 ~~~~I~~~g~~lP~~--~v~~~~~~~~~~~----~~------~~i~~~~Gi~~R~~~~-~-----~----------~~~~ 54 (329)
T PRK07204 3 RYISIKGIGTYLPKR--KVDSLELDKKLDL----PE------GWVLKKSGVKTRHFVD-G-----E----------TSSY 54 (329)
T ss_pred CCcEEEEEEEeCCCc--eecHHHHHHhhCC----CH------hHhhhccCceEEeecC-C-----C----------CHHH
Confidence 468999999999997 8999999886531 11 3677899999999875 2 1 2468
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCC-CceeeeecCCcchHHHHHHHHHHHHHhcCC
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRK-DIKVFNLTGMGCSASLISVDIVRSVFKTYK 186 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~-~~~~~~l~~~gCs~~~~al~~A~~ll~~g~ 186 (465)
|+.+|+++||+++|++|+|||+||+++ ++++..|+.+..|+++||+++ .++++++++ +|++++.||++|.++++++.
T Consensus 55 la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~-~C~~~~~al~~a~~~l~~g~ 133 (329)
T PRK07204 55 MGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINS-TCLSFITALDTISYAIECGR 133 (329)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccc-hhHHHHHHHHHHHHHHHCCC
Confidence 999999999999999999999999875 566678999999999999985 379999994 99999999999999999999
Q ss_pred CCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCCCC
Q 039047 187 NMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQG 266 (465)
Q Consensus 187 ~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~G 266 (465)
.++||||++|.+|.. .+..++.. ..+|||||+|+||++.+.. .+ ++.++..+++..+.....+.. +
T Consensus 134 ~~~~Lvv~~e~~s~~-~~~~~~~~---~~lfGDGAaA~ll~~~~~~-----~~---il~~~~~t~~~~~~~~~~~~~--~ 199 (329)
T PRK07204 134 YKRVLIISSEISSVG-LNWGQNES---CILFGDGAAAVVITKGDHS-----SR---ILASHMETYSSGAHLSEIRGG--G 199 (329)
T ss_pred CCEEEEEEeccccCC-CCcccCcc---eEEEecccEEEEEEEcCCC-----Cc---EEEEEEEEecCCCCceEEecC--C
Confidence 999999999998873 33333332 5799999999999986543 12 333444444433221111110 0
Q ss_pred CCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHH---HHHhccCCcCCcCCCCCccCCccEEEecCCCHH
Q 039047 267 RPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFV---RKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKA 343 (465)
Q Consensus 267 ~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~---~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~ 343 (465)
............ .. .+ ...+++.++++++...++ ++++ +++|+. .+|||+|++||+|+.
T Consensus 200 -~~~~~~~~~~~~-~~-------~~-~~~~~~~~~~~~~~~~~~~~i~~~L-----~~~gl~---~~did~~~~H~~~~~ 261 (329)
T PRK07204 200 -TMIHPREYSEER-KE-------DF-LFDMNGRAIFKLSSKYLMKFIDKLL-----MDAGYT---LADIDLIVPHQASGP 261 (329)
T ss_pred -cCCCCccccccc-cc-------Cc-eEEECCHHHHHHHHHHHHHHHHHHH-----HHcCCC---HHHCCEEEeCCCCHH
Confidence 000000000000 00 00 012233455555544333 3444 567888 489999999999999
Q ss_pred HHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeeeEE
Q 039047 344 VIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEV 414 (465)
Q Consensus 344 ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~ 414 (465)
+++.+.+.|+++++++ ..++++||||+|+|+|++|++++++|++++||+|++++||+|++|+++++|+
T Consensus 262 ~~~~i~~~l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 262 AMRLIRKKLGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred HHHHHHHHcCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 9999999999999998 5899999999999999999999999999999999999999999999999985
No 22
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.3e-45 Score=372.07 Aligned_cols=320 Identities=20% Similarity=0.194 Sum_probs=243.1
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhhc-cCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhH
Q 039047 28 DKECYILDYQCYKPTDDRMVSTDFAGQVIKRTK-NLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEM 106 (465)
Q Consensus 28 ~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~-~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~ 106 (465)
.++++|.+++.|+|++ +++++++.+.+.... .....+ .++.+.+||++|++.++. + ..
T Consensus 3 ~~~v~I~~~g~~lP~~--~v~~~~~~~~~~~~~~~~~~~~----~~i~~~~Gi~~R~~~~~~-----~----------~~ 61 (338)
T PRK09258 3 YSNVAILSLAYELAPV--VVTSSEIEERLAPLYERLRLPP----GQLEALTGIRERRWWPEG-----T----------QL 61 (338)
T ss_pred ccceEEEEEEecCCCc--cCcHHHHHHHhhhcccccCCCh----hHhhhhcCceeEecCCCC-----C----------CH
Confidence 4679999999999997 899999998764321 111111 346678999999986432 1 24
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcC
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTY 185 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g 185 (465)
.+|+.+|+++||+++|+++++||.||+++ ++++..|+++..++++||++++++++++++ +|+|++.||++|.++++++
T Consensus 62 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~-~C~~~~~al~~A~~~i~~g 140 (338)
T PRK09258 62 SDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSN-ACLGFLNGMLDAANMIELG 140 (338)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhh-hhHHHHHHHHHHHHHHHcC
Confidence 68999999999999999999999999875 567889999999999999987799999996 9999999999999999999
Q ss_pred CCCEEEEEEecCCCCCCCCC-----CCcc------chhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCC
Q 039047 186 KNMNAMVVTSESLSPNWYSG-----NDRS------MILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDS 254 (465)
Q Consensus 186 ~~~~aLVV~~E~~s~~~~~~-----~dr~------~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~ 254 (465)
+.++||||++|.++..+... .+.. ..+...+|||||+|+||++.+.... .+++ +.....++++.
T Consensus 141 ~~~~~Lvv~~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~~--~~~~---~~~~~~~~~~~ 215 (338)
T PRK09258 141 QIDYALVVSGESAREIVEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHPR--GHRL---LGGVTRAATEH 215 (338)
T ss_pred CCCEEEEEEecccchhccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCCC--ccee---eeeeeecCCCc
Confidence 99999999999988732111 0111 1233578999999999998654211 2332 22333333333
Q ss_pred CccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHH---HHHHHhccCCcCCcCCCCCccCC
Q 039047 255 YGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVT---FVRKMSNNTPKGEKKAGVNFRTG 331 (465)
Q Consensus 255 ~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~---v~~~~l~~~~l~~~g~~~~~~~d 331 (465)
++.+.. + ...+..+. .++++..... +.++++ ++.|+. .+|
T Consensus 216 ~~~~~~-----~--~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~L-----~~~g~~---~~d 258 (338)
T PRK09258 216 HELCQG-----G--RDGMRTDA----------------------VGLLKEGVELAVDTWEAFL-----AQLGWA---VEQ 258 (338)
T ss_pred cccccc-----C--ccceEEcH----------------------HHHHHHHHHHHHHHHHHHH-----HHcCCC---HHH
Confidence 221110 0 11122222 2223333322 233444 456777 489
Q ss_pred ccEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheee
Q 039047 332 VDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCV 411 (465)
Q Consensus 332 id~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v 411 (465)
||+|++||+|+.+++.+.+.||++++++ +.++++||||+|+|+|++|++++++|++++||+|++++||+|++|++++
T Consensus 259 id~~i~H~~~~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~ 335 (338)
T PRK09258 259 VDRVICHQVGAAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLE 335 (338)
T ss_pred CCEEecCCCCHHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHe
Confidence 9999999999999999999999999999 4788999999999999999999999999999999999999999999999
Q ss_pred eEE
Q 039047 412 WEV 414 (465)
Q Consensus 412 ~~~ 414 (465)
+||
T Consensus 336 ~~~ 338 (338)
T PRK09258 336 VKW 338 (338)
T ss_pred eeC
Confidence 986
No 23
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=2e-43 Score=359.27 Aligned_cols=323 Identities=15% Similarity=0.165 Sum_probs=241.0
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHH
Q 039047 28 DKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEME 107 (465)
Q Consensus 28 ~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~ 107 (465)
|++++|.+++.|+|++ +++++++.+..+. +. +++.+++||.+|++.+++ + ...
T Consensus 2 ~~~v~I~~~~~~lP~~--~v~~~~l~~~~g~----~~------~~~~~~~Gi~~r~~~~~~-----~----------~~~ 54 (339)
T PRK06840 2 EMNVGIVGTGVYLPKD--VMTAEEIAEKTGI----PE------EVVIEKFGIYEKPVPGPE-----D----------HTS 54 (339)
T ss_pred CCceEEEEEEEeCCCc--ccCHHHHHHHhCC----CH------HHHhhhcCcceEeeCCCC-----C----------CHH
Confidence 5689999999999997 8999998876531 11 356688999999987542 1 246
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEee--cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhc-
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNI--SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKT- 184 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~--s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~- 184 (465)
+|+.+|++++|+++|++|+|||.||+++ .+++..|+.+.+|++++|++ +++++++++ +|++++.||.+|.+++++
T Consensus 55 ~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~~-~C~~~~~al~~A~~~l~~~ 132 (339)
T PRK06840 55 DMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIMA-VCASFPIALKVAKDLLYSD 132 (339)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Ccccccccc-cchHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999753 35677999999999999997 689999995 999999999999999999
Q ss_pred CCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCC
Q 039047 185 YKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDE 264 (465)
Q Consensus 185 g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~ 264 (465)
+..+++|||++|..+... +..++...+ ..+|||||+|+||++++.. .+ ++.+...++++.++.+..+.++
T Consensus 133 g~~~~~Lvv~~~~~s~~~-~~~~~~~~~-~~~~GDgAaA~ll~~~~~~-----~~---il~~~~~t~~~~~~~~~~~~~g 202 (339)
T PRK06840 133 PSIENVLLVGGYRNSDLV-DYDNPRTRF-MFNFAAGGSAALLKKDAGK-----NR---ILGSAIITDGSFSEDVRVPAGG 202 (339)
T ss_pred CCccEEEEEeeccccccc-CcCCCCeee-eccCCCceeEEEEEecCCC-----Cc---eEEEEEEEcCCccceEEecCCC
Confidence 678899999999988732 322332200 1348999999999986543 22 3445556666555544433211
Q ss_pred CCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHH--------HHHHHHHHHhccCCcCCcCCCCCccCCccEEE
Q 039047 265 QGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRY--------ALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFC 336 (465)
Q Consensus 265 ~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~--------a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~ 336 (465)
. ....+++.... ++ ..+...+ .+.++. ....+.++++ +++|+. .+|||+|+
T Consensus 203 ~---~~~~~~~~~~~-~~---~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~L-----~~~gl~---~~did~~~ 261 (339)
T PRK06840 203 T---KQPASPETVEN-RQ---HYLDVID------PESMKERLDEVSIPNFLKVIREAL-----RKSGYT---PKDIDYLA 261 (339)
T ss_pred c---CCCCccccccc-cc---ceEEEcC------cHHHHHHhHhhHHHHHHHHHHHHH-----HHcCCC---HHHCCEEE
Confidence 1 11111100000 00 0000001 111111 1122334444 457787 58999999
Q ss_pred ecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeeeEE
Q 039047 337 IHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEV 414 (465)
Q Consensus 337 ~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~ 414 (465)
+||+|+.+++.+++.||++++++ .++.+||||+|+|+|++|++++++|++++||++++++||+|++|+++++||
T Consensus 262 ~h~~~~~~~~~~~~~Lgl~~~~~----~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~ 335 (339)
T PRK06840 262 ILHMKRSAHIALLEGLGLTEEQA----IYLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRW 335 (339)
T ss_pred ECCcCHHHHHHHHHHcCCCHHHe----EeHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEe
Confidence 99999999999999999999997 368999999999999999999999999999999999999999999999998
No 24
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=7.8e-44 Score=358.86 Aligned_cols=310 Identities=21% Similarity=0.333 Sum_probs=243.5
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHHH
Q 039047 30 ECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEF 109 (465)
Q Consensus 30 ~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~l 109 (465)
.++|.++++|+|+. +++++++.+.++. ++ .++.+++||++|++..++ + .+.+|
T Consensus 2 ~~~I~~i~~~~P~~--~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~-----~----------~~~~l 54 (318)
T TIGR00747 2 YAGILGTGSYLPEK--VLTNADLEKMVDT----SD------EWIVTRTGIKERRIAADD-----E----------TSSTM 54 (318)
T ss_pred CCEEEEEEEECCCc--eecHHHHHHhcCC----ch------HHeecccCceEEEECCCC-----C----------CHHHH
Confidence 58999999999997 8999999886532 11 256778999999876543 1 35699
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNM 188 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~ 188 (465)
+.+|++++|+++|++|++||.||+++ ++++..|+.+.+++..+|++ ++++++++ ++|++++.||++|.++++++..+
T Consensus 55 a~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~ 132 (318)
T TIGR00747 55 GFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYK 132 (318)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999875 46677899999999999998 58999998 59999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCCCC--
Q 039047 189 NAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQG-- 266 (465)
Q Consensus 189 ~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~G-- 266 (465)
++|||++|..+.. .++.++.. ..+|||||+|+||++.+... .+.++...++++.++.+..+.++..
T Consensus 133 ~~Lvv~~e~~~~~-~~~~~~~~---~~~~GDGAaA~lL~~~~~~~--------~i~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (318)
T TIGR00747 133 TVLVVGAEKLSST-LDWTDRGT---CVLFGDGAGAVVLGESEDPG--------GIISTHLGADGTQGEALYLPAGGRPTS 200 (318)
T ss_pred EEEEEEehhhcCc-CCcCCCCe---EEEEecceeEEEEeecCCCC--------cEEEEEEEEcCCCcceEEECCCCcCCC
Confidence 9999999998763 33344443 46899999999999876531 1344555556655554444332110
Q ss_pred -CCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHH---HHHHHhccCCcCCcCCCCCccCCccEEEecCCCH
Q 039047 267 -RPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVT---FVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGK 342 (465)
Q Consensus 267 -~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~---v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~ 342 (465)
..++ +... ..+.++..+.. +.++++ +++|+. .+||+||++||+++
T Consensus 201 ~~~~~-----------------~~~~------~~~~~~~~~~~~~~~~~~~l-----~~~g~~---~~di~~~~~h~~~~ 249 (318)
T TIGR00747 201 GPSPF-----------------ITME------GNEVFKHAVRKMGDVVEETL-----EANGLD---PEDIDWFVPHQANL 249 (318)
T ss_pred CCCCc-----------------eEEC------CHHHHHHHHHHHHHHHHHHH-----HHcCCC---HHHCCEEEECCCCH
Confidence 0011 0000 12233322222 233444 456777 48999999999999
Q ss_pred HHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeeeEE
Q 039047 343 AVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEV 414 (465)
Q Consensus 343 ~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~ 414 (465)
++++.+++.||++++++. .++++||||+|+|+|++|++++++|++++||+|+++++|+|++|+++++||
T Consensus 250 ~~~~~~~~~lgi~~~k~~---~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 250 RIIEALAKRLELDMSQVV---KTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred HHHHHHHHHcCCCHHHee---ehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 999999999999999995 789999999999999999999999999999999999999999999999986
No 25
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=6.8e-44 Score=358.96 Aligned_cols=316 Identities=22% Similarity=0.343 Sum_probs=244.0
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHHH
Q 039047 30 ECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEF 109 (465)
Q Consensus 30 ~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~l 109 (465)
+++|.++++|+|+. +++++++.+.++. + . +++.+++||++|+++++. +...+|
T Consensus 1 ~~~I~~i~~~lP~~--~~~~~~~~~~~~~----~--~----~~~~~~~Gi~~r~~~~~~---------------~~~~~l 53 (320)
T cd00830 1 NARILGIGSYLPER--VVTNDELEKRLDT----S--D----EWIRTRTGIRERRIADPG---------------ETTSDL 53 (320)
T ss_pred CCEEEEEEEECCCc--EEcHHHHHHHcCC----C--H----HHhhhccCceEEeeCCCC---------------CCHHHH
Confidence 47999999999997 8999999987621 1 1 366789999999987653 135689
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNM 188 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~ 188 (465)
+.+|++++|+++|+++++||.||+++ ++++..|+.+.+|+.++|++ +++.++++ ++|++++.||.+|.+++++++.+
T Consensus 54 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~ 131 (320)
T cd00830 54 AVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAK 131 (320)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999875 45666899999999999998 79999999 59999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCCCCCC
Q 039047 189 NAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRP 268 (465)
Q Consensus 189 ~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~G~~ 268 (465)
++|||++|.++.. ..+.++. ...+|||||+|+||++.+.. .+ ++.++..++++.++.+..+..+...
T Consensus 132 ~vLvv~~e~~s~~-~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~---i~~~~~~~~~~~~~~~~~~~~~~~~- 198 (320)
T cd00830 132 NVLVVGAETLSRI-LDWTDRS---TAVLFGDGAGAVVLEATEED-----PG---ILDSVLGSDGSGADLLTIPAGGSRS- 198 (320)
T ss_pred EEEEEEehhhccc-cCcccCC---ceEEEeccceEEEEEecCCC-----Cc---EEEEEEEEcCCCCCeEEeCCCCcCC-
Confidence 9999999998874 3333333 26899999999999987652 22 3445555666666655443321100
Q ss_pred ceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHH---HHHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHHH
Q 039047 269 GFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALV---TFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVI 345 (465)
Q Consensus 269 g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~---~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~ii 345 (465)
.. +...... .++ .+...++++.... .+.++++ +++|+. .+|||+|++||+++.++
T Consensus 199 --~~--~~~~~~~----~~~------~~~~~~~~~~~~~~~~~~i~~~l-----~~~g~~---~~di~~~~~h~~~~~~~ 256 (320)
T cd00830 199 --PF--EDAEGGD----PYL------VMDGREVFKFAVRLMPESIEEAL-----EKAGLT---PDDIDWFVPHQANLRII 256 (320)
T ss_pred --cc--ccccccC----ccE------EEcChHHHHHHHHhhHHHHHHHH-----HHcCCC---HHHCCEEEECCCCHHHH
Confidence 00 0000000 000 1111233333322 2333444 457777 58999999999999999
Q ss_pred HHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeee
Q 039047 346 DGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVW 412 (465)
Q Consensus 346 ~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~ 412 (465)
+.+.+.||++++++ ..++++|||++|+|+|++|++++++|++++||+|+++++|+|++|+++++
T Consensus 257 ~~~~~~lgl~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 257 EAVAKRLGLPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred HHHHHHhCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 99999999999998 57999999999999999999999999999999999999999999999874
No 26
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=9.8e-43 Score=350.91 Aligned_cols=313 Identities=22% Similarity=0.325 Sum_probs=242.8
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHH
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEE 108 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~ 108 (465)
+.|+|.++++|+|+. +++++++.+..+. ++ +++.+++||++|+++.++ +...+
T Consensus 2 ~~v~I~ai~~~lP~~--~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~---------------~~~~~ 54 (319)
T PRK09352 2 MYAKILGTGSYLPER--VVTNDDLEKMVDT----SD------EWIVTRTGIKERRIAAPD---------------ETTSD 54 (319)
T ss_pred CceEEEEEEEECCCe--EEcHHHHHHHcCC----CH------HHhhhhcCeEEEEeCCCC---------------CCHHH
Confidence 479999999999997 8999999987531 11 357789999999866442 13568
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCC
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKN 187 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~ 187 (465)
|+.+|++++|+++|+++++||.||+++ +++...|+.+..|+.++|++ +++.++++ ++|++++.||.+|.+++++|..
T Consensus 55 la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~ 132 (319)
T PRK09352 55 LATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAY 132 (319)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999875 45666889999999999996 68999999 5999999999999999999999
Q ss_pred CEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCCCCC
Q 039047 188 MNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGR 267 (465)
Q Consensus 188 ~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~G~ 267 (465)
++|||+++|.++.. ....++.. ..+|||||+|+||++++.. ++...+..++++.++.+..+.++...
T Consensus 133 ~~vLvv~~e~~s~~-~~~~~~~~---~~~~gDGaaA~ll~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (319)
T PRK09352 133 KNVLVIGAEKLSRI-VDWTDRST---CVLFGDGAGAVVLGASEEP---------GILSTHLGSDGSYGDLLYLPGGGSRG 199 (319)
T ss_pred CEEEEEEehhhccc-cCcccCCc---eEEEeccceEEEEEEcCCC---------CeEEEEEEEcCCCCCeEEeCCCCCCC
Confidence 99999999998873 33344433 5799999999999987653 12334445555544433333211100
Q ss_pred CceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHH---HHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHH
Q 039047 268 PGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVT---FVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAV 344 (465)
Q Consensus 268 ~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~---v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~i 344 (465)
.... .++.. .+.+++++.... +.+.++ +++|+. .+||+||++||+|+.+
T Consensus 200 ---~~~~-----------~~~~~------~~~~~~~~~~~~~~~~i~~~l-----~~~g~~---~~di~~~~~h~~~~~~ 251 (319)
T PRK09352 200 ---PASP-----------GYLRM------EGREVFKFAVRELAKVAREAL-----EAAGLT---PEDIDWLVPHQANLRI 251 (319)
T ss_pred ---CCCC-----------CceEE------CCHHHHHHHHHHHHHHHHHHH-----HHcCCC---HHHCCEEEECCCCHHH
Confidence 0000 00011 112333333322 333444 456777 5899999999999999
Q ss_pred HHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeeeEE
Q 039047 345 IDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEV 414 (465)
Q Consensus 345 i~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~ 414 (465)
++.+++.||+|++++ ..++++|||++++|++++|++++++|++++||+|++++||+|++|+++++||
T Consensus 252 ~~~~~~~lg~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~ 318 (319)
T PRK09352 252 IDATAKKLGLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRW 318 (319)
T ss_pred HHHHHHHhCCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEe
Confidence 999999999999998 5789999999999999999999999999999999999999999999999997
No 27
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.6e-42 Score=355.05 Aligned_cols=345 Identities=20% Similarity=0.250 Sum_probs=244.5
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHHH
Q 039047 30 ECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEF 109 (465)
Q Consensus 30 ~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~l 109 (465)
+++|.++|+|+|++ +++|+++.+.++... +. .....+++++++||.+|+++.+.... + . +...+|
T Consensus 2 ~v~I~gig~~lP~~--~v~n~~~~~~~~~~~--~~-~~~~~~~i~~~~Gi~~R~~~~~~~~~--~---~-----~~~~~L 66 (378)
T PRK06816 2 NVYITSTGAFLPGE--PVSNDEMEAYLGLIN--GK-PSRARRIILRNNGIKTRHYALDPEGR--P---T-----HSNAQM 66 (378)
T ss_pred CeEEEeeeecCCCC--ccCHHHHHHHHhhcc--CC-cHHHHHHHHHhCCCceEEEEECCCCC--C---C-----CCHHHH
Confidence 68999999999997 899999998876432 11 11233589999999999987643210 0 0 135799
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNM 188 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~ 188 (465)
+.+|+++||+++|++|+|||.||+++ ++++..|+.+..|+++||++ ++++++++ ++|+|++.||.+|.+++++|+.+
T Consensus 67 a~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~ 144 (378)
T PRK06816 67 AAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA-GVCAAGMMALKYAYLSVKAGESR 144 (378)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec-CcCHHHHHHHHHHHHHHHCCCCC
Confidence 99999999999999999999999975 56678899999999999998 58899998 59999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCCC--C---------c--cc----hhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCC
Q 039047 189 NAMVVTSESLSPNWYSGN--D---------R--SM----ILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGAR 251 (465)
Q Consensus 189 ~aLVV~~E~~s~~~~~~~--d---------r--~~----~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd 251 (465)
+||||++|.+|..+.... + + .. -+.+++|||||+|+||++.+... +..+. +......++
T Consensus 145 ~vLvv~~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~---g~~l~-~~~~~~~~~ 220 (378)
T PRK06816 145 NAVATASELASRWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPD---GLSLR-IDWIDLRSY 220 (378)
T ss_pred EEEEEeEccchhhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCC---CceEE-EEEEeeecc
Confidence 999999999987432110 0 1 00 01145799999999999866431 12111 111122222
Q ss_pred CCCCccceeccCC---CC-CCcee-cCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHH---HHHhccCCcCCcC
Q 039047 252 DDSYGCCVQTEDE---QG-RPGFH-LGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFV---RKMSNNTPKGEKK 323 (465)
Q Consensus 252 ~~~~~~~~~~~d~---~G-~~g~~-l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~---~~~l~~~~l~~~g 323 (465)
...+..++..... .+ ..+.. ...+-+...+. ..+.+.++.+++++...++ ++++ ++.|
T Consensus 221 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~i~~~L-----~~~g 286 (378)
T PRK06816 221 AGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAASA---------LSLKQDVRLLNENIVVYTIKPLLELV-----DKRN 286 (378)
T ss_pred cccCccceecCCccCCCCCccCcccCCHHHHHhccC---------chHHhHHHHHHHHhHHHHHHHHHHHH-----HHcC
Confidence 2222222211000 00 00000 00000000000 0011223344444433323 3344 5678
Q ss_pred CCCCccCCccEEEecCCCHHHHHHHHhhC-----CCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEE
Q 039047 324 AGVNFRTGVDHFCIHTGGKAVIDGIGFSL-----DLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLM 398 (465)
Q Consensus 324 ~~~~~~~did~~~~H~~~~~ii~~i~~~L-----gl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~ 398 (465)
+. .+|||+|++||+|..+++.+.++| |++++++ ..++++||||+|||+|++|++++++|++++||+|++
T Consensus 287 l~---~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~ 360 (378)
T PRK06816 287 LD---PDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW---FTNLATVGNTGSASIYIMLDELLNSGRLKPGQKILC 360 (378)
T ss_pred CC---hhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe---EEeccccccccchHHHHHHHHHHHcCCCCCCCEEEE
Confidence 88 489999999999999999999987 8999998 589999999999999999999999999999999999
Q ss_pred EeeCch-hhhheeeeEEE
Q 039047 399 ISFGAG-FKCNSCVWEVV 415 (465)
Q Consensus 399 ~sfGaG-~~~~~~v~~~~ 415 (465)
++.|+| |.++.+++.|+
T Consensus 361 ~~~~s~~~~~~~~~~~~~ 378 (378)
T PRK06816 361 FVPESGRFSTAFMLLTVV 378 (378)
T ss_pred EEecccchhheeEEEEEC
Confidence 987776 99999999873
No 28
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=2e-42 Score=353.19 Aligned_cols=315 Identities=17% Similarity=0.201 Sum_probs=236.5
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHHH
Q 039047 30 ECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEF 109 (465)
Q Consensus 30 ~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~l 109 (465)
+++|.+++.|+|+. +++++++.+..+. ++ +++.+++||.+|++++++ +...+|
T Consensus 2 ~v~I~~~g~ylP~~--~v~~~el~~~~~~----~~------~~i~~~~Gi~~R~~~~~~---------------~~~~~l 54 (347)
T PRK04262 2 MVGIVGYGAYIPRY--RIKVEEIARVWGD----DP------EAIKRGLGVEEKSVPGPD---------------EDTATI 54 (347)
T ss_pred ceeEEEEEEeCCCE--EecHHHHHHHhCc----CH------HHHhhccCeeeeecCCCC---------------cCHHHH
Confidence 68999999999996 8999999987632 21 367889999999987543 135699
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNM 188 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~ 188 (465)
+.+|+++||+++|++++|||.||+++ ++++..|+.+.+++++||+++++.++++++ ||++++.||.+|.+++++|+.+
T Consensus 55 a~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~~-~C~~~~~aL~~A~~~i~sg~~~ 133 (347)
T PRK04262 55 AVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLEF-ACKAGTAALQAAMGLVKSGMIK 133 (347)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHHH-hHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999875 567788999999999999986688999985 9999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEee-eCCCCCCCccceeccCCC-C
Q 039047 189 NAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTH-HGARDDSYGCCVQTEDEQ-G 266 (465)
Q Consensus 189 ~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~-~~sd~~~~~~~~~~~d~~-G 266 (465)
+||||++|.... .+.++. ...|||||+|+||++.+. ..++.+ +. ..++. .+ .++..+.. .
T Consensus 134 ~aLVv~~e~~~~---~~~~~~----~~~~GDGA~A~ll~~~~~-----~~~i~~---~~~~~~d~--~d-~~~~~~~~~~ 195 (347)
T PRK04262 134 YALAIGADTAQG---APGDAL----EYTAAAGGAAFIIGKEEV-----IAEIEA---TYSYTTDT--PD-FWRREGEPYP 195 (347)
T ss_pred EEEEEEEeeecc---CCCCCC----CCcCCCCcEEEEEecCcc-----cceeec---cccccccc--hh-hcCCCCCcCC
Confidence 999999998432 223332 246799999999997542 123322 21 11221 11 12111000 0
Q ss_pred CCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHHHH
Q 039047 267 RPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVID 346 (465)
Q Consensus 267 ~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~ii~ 346 (465)
..+..+..+ ...++... ...+.++ +++|+. .+|||+|++||+|+.+++
T Consensus 196 ~~~~~~~~~-----------------------~~~~~~~~-~~i~~~L-----~~~gl~---~~dId~~v~Hq~n~~~~~ 243 (347)
T PRK04262 196 RHGGRFTGE-----------------------PAYFKHII-SAAKGLM-----EKLGLK---PSDYDYAVFHQPNGKFPL 243 (347)
T ss_pred CcCceecch-----------------------HHHHHHHH-HHHHHHH-----HHhCcC---HHHhceeecCCCchHHHH
Confidence 000111100 01222222 2233444 456777 589999999999999999
Q ss_pred HHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeeeEEEecCCCCCCCCc
Q 039047 347 GIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVRDLDGNVGNVW 426 (465)
Q Consensus 347 ~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~~~~~~~~~~~~w 426 (465)
.+.+.||++++++..++ ++++||||||||+|++|+++++ ++++||+|++++||+|+++.+.+|++....+. .+.|
T Consensus 244 ~~~~~Lgl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~~~--~~~~ 318 (347)
T PRK04262 244 RVAKMLGFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAIEE--KRDL 318 (347)
T ss_pred HHHHHcCCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhHHH--hhhc
Confidence 99999999999996433 6899999999999999999987 48999999999999999999999999766654 3456
Q ss_pred c
Q 039047 427 K 427 (465)
Q Consensus 427 ~ 427 (465)
.
T Consensus 319 ~ 319 (347)
T PRK04262 319 A 319 (347)
T ss_pred c
Confidence 4
No 29
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.9e-41 Score=349.07 Aligned_cols=350 Identities=16% Similarity=0.189 Sum_probs=242.2
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhc-cCCcc---h----------HHHHHHHHHHcCccceEeecCc-cccCC
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTK-NLGLN---E----------YKFLLKAIVSSGIGEQTYSPRI-MFAGR 93 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~-~~~~~---~----------~~f~~ki~~~sGI~~r~~~~~~-~~~~~ 93 (465)
++++|+++|+|+|++ +++|+++.+.++... ++..+ . ....++|.+++||++|+++.+. .....
T Consensus 1 ~~~~I~~~g~~lP~~--~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~ 78 (372)
T PRK07515 1 HNVVISGTGLYTPPE--SISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPD 78 (372)
T ss_pred CCcEEEEEEeecCCc--cccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCccc
Confidence 368999999999997 899999998863211 11000 0 0013578889999999987632 11100
Q ss_pred CCCCCh----hhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcc
Q 039047 94 EDNPTL----QDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGC 168 (465)
Q Consensus 94 ~~~~t~----~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gC 168 (465)
+..+.. ....+.+.+|+.+|+++||+++|+++++||.||+++ +++...|+.+..|++.||++ ..+++++ ++|
T Consensus 79 ~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aC 155 (372)
T PRK07515 79 RMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VAC 155 (372)
T ss_pred ccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chh
Confidence 000111 111234578999999999999999999999999875 46678999999999999996 5789998 599
Q ss_pred hHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeee
Q 039047 169 SASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHH 248 (465)
Q Consensus 169 s~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~ 248 (465)
++++.||.+|.++|++|..++||||++|.++.. ..+.+++. ..+|||||+|+||++.+....+..+++.+ ++.
T Consensus 156 asg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-~~~~d~~~---~~lfGDgAaA~vL~~~~~~~~~~~~~il~---~~~ 228 (372)
T PRK07515 156 SSATFGIQTAANAIRSGSARRVLVVNPEICSGH-LNFRDRDS---HFIFGDVATAVIVERADTATSAGGFEILG---TRL 228 (372)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEeeeccccc-ccccCCCC---CEEecCccEEEEEeeccccccCCCceEEE---EEe
Confidence 999999999999999999999999999999874 33455543 68999999999999865432112344332 322
Q ss_pred CCCCCCCccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCc
Q 039047 249 GARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNF 328 (465)
Q Consensus 249 ~sd~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~ 328 (465)
.++ ..+.+. .. .|. +.....+.+.... ..+.+++.++++++...+++.+.+. |+++|+.
T Consensus 229 ~~~--~~~~~~-~~--~G~-~~~~~~~~~~~~~----------~~~~~~g~~~~~~~~~~~~~~i~~~--L~~~gl~--- 287 (372)
T PRK07515 229 FTQ--FSNNIR-NN--FGF-LNRADPEGIGARD----------KLFVQEGRKVFKEVCPMVAEHIVEH--LAENGLT--- 287 (372)
T ss_pred ecc--ccccee-cC--CCC-CCCCCcccccccc----------ceEEeccHHHHHHHHHHHHHHHHHH--HHHcCCC---
Confidence 221 111111 11 110 0000000000000 0112234555666555444332222 3567888
Q ss_pred cCCccEEEecCCCHHHHHHHHhh-CCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhh
Q 039047 329 RTGVDHFCIHTGGKAVIDGIGFS-LDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKC 407 (465)
Q Consensus 329 ~~did~~~~H~~~~~ii~~i~~~-Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~ 407 (465)
.+|||+|++||+|+.+++.+.+. ||++.+. +.++.++++||||+|+|+|++|+++. +++++||+|++++||+|++|
T Consensus 288 ~~dId~~~~Hq~~~~~~d~~~~~llg~~~~~-~~~~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~~~ 364 (372)
T PRK07515 288 PADVKRFWLHQANINMNQLIGKKVLGRDATP-EEAPVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGYSI 364 (372)
T ss_pred HHHCCEEEECCCCHHHHHHHHHHhccCCCCh-hhceEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccHHH
Confidence 48999999999999999999988 5755432 22257899999999999999999874 57899999999999999999
Q ss_pred heeeeEE
Q 039047 408 NSCVWEV 414 (465)
Q Consensus 408 ~~~v~~~ 414 (465)
+++++|.
T Consensus 365 ~~~ll~~ 371 (372)
T PRK07515 365 GSVIVRK 371 (372)
T ss_pred HHHHhcc
Confidence 9999874
No 30
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=8.3e-42 Score=348.19 Aligned_cols=317 Identities=14% Similarity=0.161 Sum_probs=237.8
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHHH
Q 039047 30 ECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEF 109 (465)
Q Consensus 30 ~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~l 109 (465)
+++|.++++|+|+. +++++++.+..+. ++ +++.+++||++|++++++ + .+.+|
T Consensus 1 ~~~I~g~g~~lP~~--~v~n~~l~~~~~~----~~------~~i~~~~Gi~~r~v~~~~-----~----------~~~~l 53 (345)
T TIGR00748 1 MAGIVGYGAYIPMY--RIKVEEIARVWGK----DP------ESISNGLPVEEKAVPGLD-----E----------DTATI 53 (345)
T ss_pred CccEEEEEEeCCCe--eecHHHHHHHhCC----CH------hHeeeccceeeeecCCCC-----C----------CHHHH
Confidence 36899999999997 8999999886531 21 356779999999987653 1 34699
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNM 188 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~ 188 (465)
+.+|+++||+++|++++|||.||+++ ++++..|+.+..+++++|+++++.++++++ +|+|++.||.+|.+++++|..+
T Consensus 54 a~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~-aC~g~~~al~~A~~~i~sg~~~ 132 (345)
T TIGR00748 54 GVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEF-ACKAGTAGIQACMGLVASGMIK 132 (345)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHHH-hHHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999875 566778999999999999976789999996 9999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCCCCCC
Q 039047 189 NAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRP 268 (465)
Q Consensus 189 ~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~G~~ 268 (465)
+||||++|..+.. +.++- ...|||||+|+||++.+.. .++.+. ....+++. + .++.. +.
T Consensus 133 ~vLVv~~d~~~~~---~~~~~----~~~~GDGAaA~vl~~~~~~-----~~~~~~--~~~~~d~~--~-~~~~~---~~- 191 (345)
T TIGR00748 133 YGLAIGADTAQGA---PGDAL----EYTAGAGGAAYIIGEKNTV-----AYFEGT--YSYTTDTP--D-FWRRE---GE- 191 (345)
T ss_pred EEEEEEEeecccC---CCccC----cccCCCceEEEEEccCCcc-----eEeecc--cceecccc--c-ccccC---CC-
Confidence 9999999998642 22332 3578999999999965432 122111 11112211 1 11110 00
Q ss_pred ceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHHHHHH
Q 039047 269 GFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDGI 348 (465)
Q Consensus 269 g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~ii~~i 348 (465)
.+ |....+ .....++++++.. +.++++ +++|+. .+|||+|++||+|.++++.+
T Consensus 192 ~~------~~~~~~------------~~~~~~~~~~~~~-~~~~~L-----~~~gl~---~~did~~i~Hq~~~~~~~~~ 244 (345)
T TIGR00748 192 PY------PRHGGR------------FTGEPAYFHHVVT-AAKGLM-----EKLGLT---PEDFDYAVFHQPNGKFYLVA 244 (345)
T ss_pred cC------CCcCCe------------ecChHHHHHHHHH-HHHHHH-----HHcCCC---HHHcCEEEeCCCChHHHHHH
Confidence 00 000000 0001235555553 334555 457777 48999999999999999999
Q ss_pred HhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeeeEEEecCCCCCCCCcc
Q 039047 349 GFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVRDLDGNVGNVWK 427 (465)
Q Consensus 349 ~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~~~~~~~~~~~~w~ 427 (465)
.+.||++++++..+ ...++||||+|||+|+.|++.++ ++++||+|++++||+|++|++++|+|....+. ..+|+
T Consensus 245 ~~~lgl~~ek~~~~-~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~~--~~~~~ 318 (345)
T TIGR00748 245 ARMLGFPKEQVKPG-LLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIEE--KRDLA 318 (345)
T ss_pred HHHcCCCHHHeecc-ccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHHH--Hhhhh
Confidence 99999999998521 12489999999999999999886 68999999999999999999999999776665 45575
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=1.6e-39 Score=327.67 Aligned_cols=316 Identities=22% Similarity=0.292 Sum_probs=234.5
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHHH
Q 039047 30 ECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEF 109 (465)
Q Consensus 30 ~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~l 109 (465)
.++|.++++|+|+. +++++++.+..+. . ++...+||++|++..+. +...+|
T Consensus 1 ~v~I~~i~~~lP~~--~v~~~~~~~~~~~----~--------~~~~~~gi~~r~~~~~~---------------~~~~~l 51 (324)
T cd00827 1 DVGIEAIGAYLPRY--RVDNEELAEGLGV----D--------PGKYTTGIGQRHMAGDD---------------EDVPTM 51 (324)
T ss_pred CccEEEEEecCCce--eecHHHHHHHhCC----C--------cceeeeecceeEecCCC---------------CCHHHH
Confidence 47899999999997 8999999887531 1 45667999999987542 124689
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNM 188 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~ 188 (465)
+.+|++++|+++|+++++||.||+++ ++....|+.+.+|++.+|++ ++++++++ ++|++++.||.+|.+++++|..+
T Consensus 52 ~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~ 129 (324)
T cd00827 52 AVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWR 129 (324)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999875 45555889999999999998 79999999 59999999999999999999999
Q ss_pred EEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCCCCCC
Q 039047 189 NAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRP 268 (465)
Q Consensus 189 ~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~G~~ 268 (465)
++|||++|.++.... ..++ ..++|||||+|+||++.+... .++ +..++..+++..+.+.. +.-+.+
T Consensus 130 ~vlvv~~e~~~~~~~-~~~~----~~~~~gdgaaA~ll~~~~~~~---~~~---i~~~~~~~~~~~~~~~~-~~~~~~-- 195 (324)
T cd00827 130 YALVVASDIASYLLD-EGSA----LEPTLGDGAAAMLVSRNPGIL---AAG---IVSTHSTSDPGYDFSPY-PVMDGG-- 195 (324)
T ss_pred EEEEEEEHHhhhccc-CCCC----ccccccCceEEEEEecCcccc---cCC---ceeeeeecccccccCcc-ceeccC--
Confidence 999999999987432 1122 268999999999999876520 122 34445555544332000 000000
Q ss_pred ceecCCChhHHHHHHHhhhhhhcCCCcchH--HHHHHHH---HHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCCH-
Q 039047 269 GFHLGKNLPKAATRAFVDNLRVISPMILPI--RELLRYA---LVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGK- 342 (465)
Q Consensus 269 g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~--~e~~~~a---~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~- 342 (465)
... +.. ..-...+ .++. .++++.+ +..+.++.++ +.++. +||++|++||+|+
T Consensus 196 ---~~~--~~~--~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~-----~~~~~----~~i~~~~~h~~~~~ 253 (324)
T cd00827 196 ---YPK--PCK--LAYAIRL------TAEPAGRAVFEAAHKLIAKVVRKALD-----RAGLS----EDIDYFVPHQPNGK 253 (324)
T ss_pred ---CCc--chh--hhhhcce------eecCCccchHHHHhHHHHHHHHHHHH-----Hcccc----cccceeeccCchHH
Confidence 000 000 0000000 0000 1122222 2223334443 34443 6899999999999
Q ss_pred HHHHHHHhhCCCCcccchhHHH-HHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeee
Q 039047 343 AVIDGIGFSLDLTEYDLEPARM-TLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVW 412 (465)
Q Consensus 343 ~ii~~i~~~Lgl~~e~~~~s~~-~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~ 412 (465)
.+++.+.+.|+++++++.+++. ++++||||+++|+|++|+++++++++++||+|++++||+|++|+++++
T Consensus 254 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 254 KILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred HHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 9999999999999999986654 899999999999999999999999999999999999999999998864
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=5.1e-36 Score=309.14 Aligned_cols=307 Identities=14% Similarity=0.131 Sum_probs=222.0
Q ss_pred eEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHHHH
Q 039047 31 CYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEFF 110 (465)
Q Consensus 31 v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~la 110 (465)
|+|.+++.|+|+. +++++++.+..+. ++ +|+...+|++++++.++. |++.+|+
T Consensus 1 iGI~~i~~y~P~~--~v~~~ela~~~g~----~~------~~~~~g~G~~~~~~~~~~---------------ed~~~la 53 (379)
T TIGR01835 1 IGIDKISFFTPQN--YLDMTALAEARGV----DP------EKFHIGIGQKKMAVPPID---------------EDIVTMA 53 (379)
T ss_pred CCEeEEEEECCCE--EeeHHHHHHHhCC----CH------HHHHhhcCceEEeeCCCC---------------CCHHHHH
Confidence 5899999999996 8999999986431 22 366778999988865542 2356899
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCE
Q 039047 111 EDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMN 189 (465)
Q Consensus 111 ~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~ 189 (465)
.+|+++||+++ +|++||.||++| |+.+..|+.+..|++.||++++++++|+.+ +|+|++.||.+|.+++++++.++
T Consensus 54 ~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~~-aC~gg~~aL~~A~~~i~s~~~~~ 130 (379)
T TIGR01835 54 ASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELKQ-ACYGATAALQMAKGHVALSPDRK 130 (379)
T ss_pred HHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEecc-ccHHHHHHHHHHHHHHHcCCCCe
Confidence 99999999998 899999999975 677778999999999999987899999995 99999999999999999999999
Q ss_pred EEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCCCCCCc
Q 039047 190 AMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPG 269 (465)
Q Consensus 190 aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~G~~g 269 (465)
||||++|..... . .+ . ...+|||||+|+||++++.. ..+.. .+...+++ ....+++.. .
T Consensus 131 aLVv~~D~a~~~--~-~~-~---~~~~~GdGA~A~Ll~~~~~i-----~~~~~--~~~~~t~~--~~df~~p~~---~-- 189 (379)
T TIGR01835 131 VLVIASDIAKYG--L-ES-P---GEPTQGAGAVAMLVSADPKL-----LAINE--DSVLYTDD--IMDFWRPNY---S-- 189 (379)
T ss_pred EEEEEeehhhcc--c-CC-C---CCccccCccEEEEEecCCCe-----eEEec--cceeeecC--CCCccCCCC---C--
Confidence 999999995431 1 11 1 13679999999999976421 11110 11112221 122333321 0
Q ss_pred eecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHH----H
Q 039047 270 FHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAV----I 345 (465)
Q Consensus 270 ~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~i----i 345 (465)
..|.+.++.. .+.+...+....+..+ ++.|+. .+|||+||+||++.++ +
T Consensus 190 -----~~~~v~g~~s--------------~~~y~~~~~~~~~~~l-----~~~g~~---~~did~~i~H~p~~~~~~k~~ 242 (379)
T TIGR01835 190 -----TTALVDGQYS--------------NEQYLNAFENAWNDYA-----KRTGLS---LADFAAFCFHVPFTKMGLKAL 242 (379)
T ss_pred -----CceeECcHHH--------------HHHHHHHHHHHHHHHH-----HHhCCC---HHHcCEEEECCCCCcHHHHHH
Confidence 0011111110 0111112222333444 346677 4899999999997766 3
Q ss_pred HHHHhhCCCCc-c----cchhHHHHHhhhccccccHHHHHHHHHHHcC-CCCCCCEEEEEeeCchhhhheeeeEEE
Q 039047 346 DGIGFSLDLTE-Y----DLEPARMTLHRFGNTSAASLWYVLAYMEAKK-RLKKGDRVLMISFGAGFKCNSCVWEVV 415 (465)
Q Consensus 346 ~~i~~~Lgl~~-e----~~~~s~~~l~~~GNtssasi~~~L~~~~~~g-~l~~Gd~vl~~sfGaG~~~~~~v~~~~ 415 (465)
+.+.+.++++. + .+++|+.+++++|||+|+|+++.|+.+++.+ ++++||+|+|++||+|+.......++.
T Consensus 243 ~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~ 318 (379)
T TIGR01835 243 RHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLV 318 (379)
T ss_pred HHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEc
Confidence 44666777773 2 3345667899999999999999999999886 799999999999999998887777663
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=5.9e-34 Score=296.98 Aligned_cols=316 Identities=16% Similarity=0.193 Sum_probs=223.0
Q ss_pred CCCceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhH
Q 039047 27 RDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEM 106 (465)
Q Consensus 27 r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~ 106 (465)
+|++++|.++|.|+|+. +|+++++.++.+. ++ .|+ ++||++|++.... ..|++
T Consensus 1 ~~~~vgI~gig~Y~P~~--~v~n~eLa~~~g~----~~------~~~--~~GI~~r~~ava~-------------~~Ed~ 53 (459)
T PLN02577 1 MPKNVGILAMEVYFPPT--CVQQEALEAHDGV----SK------GKY--TIGLGQDCMAFCT-------------DVEDV 53 (459)
T ss_pred CCCccEEEEEEEeCCCe--EEcHHHHHHHhCC----CH------HHH--hhccceeEeccCC-------------CCCCH
Confidence 47789999999999997 8999999987532 22 243 6899999874211 01346
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHH---HHcCCCCCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRII---NRYKMRKDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~---~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
.+|++.|++++|+++|++|++||.||++| |+.+..|+.+..|+ ++||.+ ++.+||+++ +|+|++.||.+|.+++
T Consensus 54 ~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~~-AC~G~~~AL~~A~~~i 131 (459)
T PLN02577 54 ISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDSTN-ACYGGTAALLNCVNWV 131 (459)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehhh-hhHHHHHHHHHHHHHH
Confidence 78999999999999999999999999985 67788999998886 678886 799999996 9999999999999999
Q ss_pred hcCC--CCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCcccee
Q 039047 183 KTYK--NMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQ 260 (465)
Q Consensus 183 ~~g~--~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~ 260 (465)
+++. .++||||++|..+.... + .+ ..+||||+|+||+.++.. .+.. ...++.......+|+
T Consensus 132 ~sg~~~~~~aLVV~aD~a~~~~~-~-~e------~t~GdGA~A~lv~~~~~~------~l~~---~~~g~~~~~~~Df~r 194 (459)
T PLN02577 132 ESSSWDGRYGLVVAADSAVYAEG-P-AR------PTGGAGAVAMLVGPNAPI------VFES---KYRGSHMAHVYDFYK 194 (459)
T ss_pred HcCCCCCCeEEEEEechhhccCC-C-CC------CCCCcceEEEEEccCCCc------eeec---ccccccCcccchhcc
Confidence 9986 59999999999765311 1 22 356999999999975421 1111 111222222234554
Q ss_pred ccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHH---HHHhccC-CcCCcCCCCCccCCccEEE
Q 039047 261 TEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFV---RKMSNNT-PKGEKKAGVNFRTGVDHFC 336 (465)
Q Consensus 261 ~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~---~~~l~~~-~l~~~g~~~~~~~did~~~ 336 (465)
+.... +.|.+. +...+.+.+..+. +.++++. .+...|+. .+|||+||
T Consensus 195 P~~~~---------~~~~vd-----------------G~~s~~~yl~~~~~~~~~~~~k~~~~~~~g~~---~~d~d~~v 245 (459)
T PLN02577 195 PDLAS---------EYPVVD-----------------GKLSQTCYLMALDSCYKRFCEKYEKLEGKQFS---ISDADYFV 245 (459)
T ss_pred cCCCC---------CceEEc-----------------chHHHHHHHHHHHHHHHHHHHHhhcccccCCC---HHHcCEEE
Confidence 43110 111111 1222222222221 2222110 01123555 48999999
Q ss_pred ecCCCHHHHHHHHhhCCCC----------------------------------------------cccchhHHHHHhhhc
Q 039047 337 IHTGGKAVIDGIGFSLDLT----------------------------------------------EYDLEPARMTLHRFG 370 (465)
Q Consensus 337 ~H~~~~~ii~~i~~~Lgl~----------------------------------------------~e~~~~s~~~l~~~G 370 (465)
+||+..++...-.+.|.+. .++++||...-++.|
T Consensus 246 fHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vG 325 (459)
T PLN02577 246 FHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVG 325 (459)
T ss_pred ecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcC
Confidence 9999877766655444311 156677767779999
Q ss_pred cccccHHHHHHHHHHHcCC-CCCCCEEEEEeeCchhhhheeeeEEEec
Q 039047 371 NTSAASLWYVLAYMEAKKR-LKKGDRVLMISFGAGFKCNSCVWEVVRD 417 (465)
Q Consensus 371 Ntssasi~~~L~~~~~~g~-l~~Gd~vl~~sfGaG~~~~~~v~~~~~~ 417 (465)
|+.++|++..|..+++... ..+|+||.|+|+|+|.......+++..+
T Consensus 326 N~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~~ 373 (459)
T PLN02577 326 NMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHEG 373 (459)
T ss_pred cccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeCC
Confidence 9999999999999997642 4599999999999999988888877654
No 34
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=100.00 E-value=6.1e-32 Score=270.32 Aligned_cols=315 Identities=14% Similarity=0.165 Sum_probs=242.2
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHH
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEE 108 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~ 108 (465)
++++|.+++.|.|.. +|..+++.+..+. ++ +++...+|++++.+.+. .|++..
T Consensus 1 ~~iGI~~~g~y~p~~--~i~~~ela~~~g~----d~------~k~~~gl~~~e~sv~~~---------------~ED~vT 53 (377)
T COG3425 1 MMIGIVGIGAYIPRY--RIKLEELARAWGV----DP------EKIKKGLGVEEKSVPPW---------------DEDAVT 53 (377)
T ss_pred CccccceEEEeccce--EeeHHHHHhhcCC----Ch------HHhhhccccccccCCCC---------------chhHHH
Confidence 368999999999996 8999999987532 22 36777899999876543 246778
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCC
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKN 187 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~ 187 (465)
|+++|++++|+++++||++|+.|+++| |..+..-+.+..|++.||+.+++.++|+.+ +|-+++.||+.|.+++.+++.
T Consensus 54 maveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~-AC~agT~aL~~a~~~v~s~~~ 132 (377)
T COG3425 54 MAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEF-ACYAGTAALQAAIGWVESGMI 132 (377)
T ss_pred HHHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHH-HHHHHHHHHHHHHHHHHcCCc
Confidence 999999999999999999999999986 667778889999999999999999999996 999999999999999999999
Q ss_pred CEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCCCCC
Q 039047 188 MNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGR 267 (465)
Q Consensus 188 ~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~G~ 267 (465)
+++|||++|+.-. -+ .+.- -...|+||+|+|++.++.. ..++.. +...++ ...++|++.+. -
T Consensus 133 ~~~LvI~sD~a~~--~~-~~~~----E~t~GAGavA~lIg~n~~~----~a~~~~---~~syt~--d~~DFwRp~~~-~- 194 (377)
T COG3425 133 SYGLVIGADTAQY--AP-GDAL----EYTAGAGAVAFLIGKNPPI----VAEFEG---TGSYTT--DTPDFWRPDGQ-P- 194 (377)
T ss_pred cceEEEeehhhcc--CC-Cccc----CccCCCceEEEEEccCCCe----EEEecC---ceEEec--CCCcccccCCC-c-
Confidence 9999999998542 12 2211 3578999999999986432 122211 111122 22346665432 0
Q ss_pred CceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHHHHH
Q 039047 268 PGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDG 347 (465)
Q Consensus 268 ~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~ii~~ 347 (465)
.|.+.++. . .+.|...+....+..+ ++.|++| +|+|++|+|+++.++-..
T Consensus 195 --------yp~~dg~~-----------s---~~~Y~~~~~~a~~~~~-----~k~gls~---~dfdy~vfH~P~~k~~~k 244 (377)
T COG3425 195 --------YPYVDGRF-----------S---EPAYFKHVENAAKGYM-----EKTGLSP---DDFDYIVFHQPNGKFPKK 244 (377)
T ss_pred --------ccccCcee-----------c---HHHHHHHHHHHHHHHH-----HHhCCCh---hhhCeEEecCCCCchHHH
Confidence 12111110 0 1122222223333444 3456664 899999999999999999
Q ss_pred HHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeeeEEEecCCC
Q 039047 348 IGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVWEVVRDLDG 420 (465)
Q Consensus 348 i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~~~~~~~ 420 (465)
.++.++.+.+++.++....++.||+.++|+++.|..+++... .+||||++++||+|........++...++.
T Consensus 245 a~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~~ 316 (377)
T COG3425 245 AAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIEE 316 (377)
T ss_pred HHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHHH
Confidence 999999999999998888899999999999999999998666 799999999999999888888877777653
No 35
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.98 E-value=6.5e-31 Score=273.83 Aligned_cols=319 Identities=17% Similarity=0.216 Sum_probs=215.8
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEe--ecCccccCCCCCCChhhhhhhHH
Q 039047 30 ECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTY--SPRIMFAGREDNPTLQDGIDEME 107 (465)
Q Consensus 30 ~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~--~~~~~~~~~~~~~t~~~~~~e~~ 107 (465)
+|+|.+++.|+|+. +|+++++.++.+. ++ .|+ .+||++|+. .++. |+..
T Consensus 1 ~vgI~~ig~y~P~~--~v~~~eLa~~~g~----~~------~k~--~~GI~~rr~av~~~~---------------Ed~~ 51 (454)
T TIGR01833 1 DVGILALEIYFPSQ--YVDQAELEKYDGV----SA------GKY--TIGLGQTKMGFCTDR---------------EDIN 51 (454)
T ss_pred CcEEEEEEEeCCCe--EEcHHHHHHhcCC----CH------HHh--eechhheecccCCCC---------------CCHH
Confidence 58999999999996 8999999886532 22 233 599999985 2221 2467
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHc---CCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRY---KMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~l---gl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
+|+..|++++|++++++|++||.||++| |+++..|+.+..|++.| |.+ ++.+||+.+ +|+|++.||.+|.++++
T Consensus 52 tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~~-AC~G~t~AL~~A~~~i~ 129 (454)
T TIGR01833 52 SLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTTN-ACYGGTAALFNAINWIE 129 (454)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEeccc-cchhHHHHHHHHHHHHH
Confidence 8999999999999999999999999975 78889999999999854 555 899999995 99999999999999999
Q ss_pred cCC--CCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceec
Q 039047 184 TYK--NMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQT 261 (465)
Q Consensus 184 ~g~--~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~ 261 (465)
++. .++||||++|+.-. . +.+. ..++||||+|+||++++.. .++. .+..++.. ....+|++
T Consensus 130 s~~~~~~~aLVV~sDia~y---~--~~~~---~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~----~~~DF~rP 192 (454)
T TIGR01833 130 SSSWDGRYALVVAGDIAVY---A--KGNA---RPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQ----HAYDFYKP 192 (454)
T ss_pred cCCcCCCeEEEEEeccccc---c--CCCe---eeccccceEEEEeccCccc----eecC-ccceEEEe----ecccccCC
Confidence 985 59999999999332 1 1121 3478999999999977641 1221 01112221 12234443
Q ss_pred cCCCCCCceecCCChhHHHHHH-HhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCC
Q 039047 262 EDEQGRPGFHLGKNLPKAATRA-FVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTG 340 (465)
Q Consensus 262 ~d~~G~~g~~l~~d~p~~~~~~-~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~ 340 (465)
... .+.|.+.++. +..+++.+ .+.|......+.+. ++.. ..+.+.. .+|+|++|+|++
T Consensus 193 ~~~---------~~~p~vdg~~S~~~Yl~a~-------~~~y~~y~~~~~~a-~~~~-~~~~~~~---~~dfd~~~fH~P 251 (454)
T TIGR01833 193 DLA---------SEYPVVDGKLSIQCYLSAL-------DRCYKSYCKKIEKQ-WGKS-GGDRKFT---LNDFDYMVFHSP 251 (454)
T ss_pred CCC---------CcccccCCccCHHHHHHHH-------HHHHHHHHHHHHHh-hhhh-ccccCCC---HhHcCEEeccCC
Confidence 210 0112111110 01122211 22222222222211 1110 0112344 489999999987
Q ss_pred CHHHHHHH-HhhC---------------------------------------------CCCcccchhHHHHHhhhccccc
Q 039047 341 GKAVIDGI-GFSL---------------------------------------------DLTEYDLEPARMTLHRFGNTSA 374 (465)
Q Consensus 341 ~~~ii~~i-~~~L---------------------------------------------gl~~e~~~~s~~~l~~~GNtss 374 (465)
..++.... .+.+ +...++++||...-++.||+.+
T Consensus 252 ~~km~~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~Yt 331 (454)
T TIGR01833 252 YCKLVQKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYT 331 (454)
T ss_pred cccHHHHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhh
Confidence 66554443 3222 1112567777666679999999
Q ss_pred cHHHHHHHHHHHcCC--CCCCCEEEEEeeCchhhhheeeeEEEec
Q 039047 375 ASLWYVLAYMEAKKR--LKKGDRVLMISFGAGFKCNSCVWEVVRD 417 (465)
Q Consensus 375 asi~~~L~~~~~~g~--l~~Gd~vl~~sfGaG~~~~~~v~~~~~~ 417 (465)
+|++..|..+++..+ ...|+||.|+|+|+|........++..+
T Consensus 332 aSlyl~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 332 ASLYGCLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred hHHHHHHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCC
Confidence 999999999997543 5679999999999999999888888654
No 36
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.98 E-value=6.3e-32 Score=256.32 Aligned_cols=203 Identities=20% Similarity=0.299 Sum_probs=162.2
Q ss_pred cCCCceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCc--chHHHHHHHHHHcCccceEeecCcccc-C-C----CCCC
Q 039047 26 KRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGL--NEYKFLLKAIVSSGIGEQTYSPRIMFA-G-R----EDNP 97 (465)
Q Consensus 26 ~r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~--~~~~f~~ki~~~sGI~~r~~~~~~~~~-~-~----~~~~ 97 (465)
+.+.+.+|+++|+..|++ +++|+++.+.+.+....+. +..++++++++++||++|+.+-+..+. . + ...+
T Consensus 10 ~~~g~A~Il~IgTA~P~~--~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~p 87 (226)
T PF00195_consen 10 RSPGPAYILSIGTAVPPH--RITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFADP 87 (226)
T ss_dssp S-SSSEEEEEEEEE-SSE--EEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSSS
T ss_pred cCCCCeEEEEEEEeCCCc--eecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccCc
Confidence 577889999999999997 8999999998655433333 445788999999999999977542110 0 0 1112
Q ss_pred C----hhhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHH
Q 039047 98 T----LQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLI 173 (465)
Q Consensus 98 t----~~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~ 173 (465)
+ ++.+.+++.+|+.+|++++|+++|++++|||+||++|++....|++..+|+++|||++++..+.+.+|||+||+.
T Consensus 88 s~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~ 167 (226)
T PF00195_consen 88 SLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAA 167 (226)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHHH
Confidence 3 556889999999999999999999999999999998777788999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCEEEEEEecCCCCCCCCC--CCccchhhhhhccccceEEEEecCC
Q 039047 174 SVDIVRSVFKTYKNMNAMVVTSESLSPNWYSG--NDRSMILANCLFRSGGAVILLSNKR 230 (465)
Q Consensus 174 al~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~--~dr~~~~~~~lfgDGaaA~lLs~~~ 230 (465)
+|.+|+++.++++..+||||++|.+|.+|+.+ .+++.+++++||||||+|+||+.+|
T Consensus 168 ~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 168 GLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 99999999999999999999999999887643 3467889999999999999999764
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.95 E-value=4.1e-28 Score=235.90 Aligned_cols=235 Identities=16% Similarity=0.165 Sum_probs=183.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhc
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKT 184 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~ 184 (465)
..+|+.+|++++|+++|++++|||.||++++ +....|+.+.+|+..+|++ +.++++++ .+|++++.||.+|.++|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHHC
Confidence 5689999999999999999999999999864 5666899999999999997 78999999 4999999999999999999
Q ss_pred CCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccc---cceeeeceEEeeeCCCCCCCccceec
Q 039047 185 YKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERN---ALFKLKCLVRTHHGARDDSYGCCVQT 261 (465)
Q Consensus 185 g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~---~~~~L~~~~~t~~~sd~~~~~~~~~~ 261 (465)
+..+++||+++|. ++|||||+|+||++.+....+ ...++ .......++...
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i---~~~~~~~~~~~~------ 138 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEI---VSTAATFDGASM------ 138 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEE---EEEEEcCCCCCC------
Confidence 9999999999997 589999999999986542110 11222 222211111100
Q ss_pred cCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCC
Q 039047 262 EDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGG 341 (465)
Q Consensus 262 ~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~ 341 (465)
.+.. . + + ... ...++++ +++|+. .+|||+|++|+.+
T Consensus 139 -------~~~~--~-~----~------------------~~~----~~i~~~l-----~~ag~~---~~did~~~~h~~~ 174 (254)
T cd00327 139 -------VPAV--S-G----E------------------GLA----RAARKAL-----EGAGLT---PSDIDYVEAHGTG 174 (254)
T ss_pred -------CCCC--C-h----H------------------HHH----HHHHHHH-----HHcCCC---HHHCCEEEccCCc
Confidence 0000 0 0 0 011 1223344 346666 4899999999999
Q ss_pred HHHHHHHHhhCCCCcccch--hHHHHHhhhccccccHHHHHHHHHHHcCCCC-------CCCEEEEEeeCchhhhheeee
Q 039047 342 KAVIDGIGFSLDLTEYDLE--PARMTLHRFGNTSAASLWYVLAYMEAKKRLK-------KGDRVLMISFGAGFKCNSCVW 412 (465)
Q Consensus 342 ~~ii~~i~~~Lgl~~e~~~--~s~~~l~~~GNtssasi~~~L~~~~~~g~l~-------~Gd~vl~~sfGaG~~~~~~v~ 412 (465)
..+.+.+++.++++.++.. +...+..+|||++++|.++.|.+.++..+.+ +||+++++++|+|++++++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 175 TPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred CccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 9999999999999887763 3357889999999999999999998766655 899999999999999998875
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.93 E-value=1.4e-25 Score=226.75 Aligned_cols=252 Identities=15% Similarity=0.162 Sum_probs=182.2
Q ss_pred HHHHHHHHHHHHHHHcCCC----cCCcCEEEEeec-CCCC---------------------CChHHHHHHHHcCCCCCce
Q 039047 106 MEEFFEDSIAKILDRSGIS----PKEIDILVVNIS-MIAI---------------------MPSLSSRIINRYKMRKDIK 159 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~----~~dId~li~~~s-~~~~---------------------~Ps~a~~i~~~lgl~~~~~ 159 (465)
..+|+.+|++++|+++|++ +++||.||++++ .... .|+.+.+|+..+|++ .+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CC
Confidence 4589999999999999999 999999998754 3332 678899999999994 68
Q ss_pred eeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCCC----------C--Cc--cchhhhhhccccceEEE
Q 039047 160 VFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSG----------N--DR--SMILANCLFRSGGAVIL 225 (465)
Q Consensus 160 ~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~----------~--dr--~~~~~~~lfgDGaaA~l 225 (465)
+++++ .+|++++.||++|.++|++|..+++||+++|..+..+... . .+ +.....++|||||+|+|
T Consensus 89 ~~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred ccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 89999 5999999999999999999999999999999876532210 0 00 01123789999999999
Q ss_pred EecCCcccc---ccceeeeceEEeeeCCCCCCCccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHH
Q 039047 226 LSNKRSLER---NALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELL 302 (465)
Q Consensus 226 Ls~~~~~~~---~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~ 302 (465)
|++.+.... +...++. ......++.... .+ . +. .+ .+
T Consensus 168 L~~~~~a~~~~~~~~~~i~---~~~~~~~~~~~~------------~~--~---~~--~~------------------~~ 207 (332)
T cd00825 168 VEELEHALARGAHIYAEIV---GTAATIDGAGMG------------AF--A---PS--AE------------------GL 207 (332)
T ss_pred ECcHHHHHHCCCeEEEEEE---EEEEccCCCCCC------------CC--C---cC--HH------------------HH
Confidence 997654211 0112222 222222211100 00 0 00 00 01
Q ss_pred HHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCcccc--hhHHHHHhhhccccccHHHHH
Q 039047 303 RYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDL--EPARMTLHRFGNTSAASLWYV 380 (465)
Q Consensus 303 ~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e~~--~~s~~~l~~~GNtssasi~~~ 380 (465)
....++++ +++|+. .+|||++++|+.|+.+.+.+++.++++.++. .+...+..+|||++++|.++.
T Consensus 208 ----~~~i~~al-----~~agl~---~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~ 275 (332)
T cd00825 208 ----ARAAKEAL-----AVAGLT---VWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLA 275 (332)
T ss_pred ----HHHHHHHH-----HHcCCC---HhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHH
Confidence 11223444 346777 4899999999999999999999888776542 122577899999999999999
Q ss_pred HHHHHHcCCCC-------------------------CCCEEEEEeeCchhhhheeee
Q 039047 381 LAYMEAKKRLK-------------------------KGDRVLMISFGAGFKCNSCVW 412 (465)
Q Consensus 381 L~~~~~~g~l~-------------------------~Gd~vl~~sfGaG~~~~~~v~ 412 (465)
|..+....+.+ +|++++++++|.|.+++++|+
T Consensus 276 l~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 276 VDEAVLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred HHHHHHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 99988765555 789999999999999999874
No 39
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.84 E-value=1.3e-20 Score=169.30 Aligned_cols=127 Identities=21% Similarity=0.386 Sum_probs=94.1
Q ss_pred ceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEe
Q 039047 258 CVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCI 337 (465)
Q Consensus 258 ~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~ 337 (465)
+.+..++.| ..+.|++++|..+.+++...+ +.+++ +.++. + .++.+|++
T Consensus 17 m~~~i~~~G-f~~~Ls~~vP~~i~~~i~~~~----------------------~~~L~-----~~g~~-~--~~~~~wav 65 (151)
T PF02797_consen 17 MGWDIGDTG-FHFILSKEVPDLISDNIPPFV----------------------EDLLA-----RHGLS-D--WDILFWAV 65 (151)
T ss_dssp EEEEEETTE-EEEEE-TTHHHHHHHHHHHHH----------------------HHHHH-----GGTCC-S--GGGSEEEE
T ss_pred eEEEEeCCe-EEEEEhhHhHHHHHHHHHHHH----------------------HHHHh-----hhccc-c--cccceeee
Confidence 434433444 457799999988766543322 22332 23444 2 35579999
Q ss_pred cCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHH----cCCCCC---CCEEEEEeeCchhhhhee
Q 039047 338 HTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEA----KKRLKK---GDRVLMISFGAGFKCNSC 410 (465)
Q Consensus 338 H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~----~g~l~~---Gd~vl~~sfGaG~~~~~~ 410 (465)
|+||++|++.+++.|+|+++++.+||.+|++||||||++++++|+++.+ +|.... +++++++|||+||+..++
T Consensus 66 HPGG~~ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~ 145 (151)
T PF02797_consen 66 HPGGRKILDAVEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGM 145 (151)
T ss_dssp E-SSHHHHHHHHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEE
T ss_pred cCChHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeE
Confidence 9999999999999999999999999999999999999999999999887 344332 589999999999999999
Q ss_pred eeEEE
Q 039047 411 VWEVV 415 (465)
Q Consensus 411 v~~~~ 415 (465)
++|.+
T Consensus 146 lLr~~ 150 (151)
T PF02797_consen 146 LLRSV 150 (151)
T ss_dssp EEEE-
T ss_pred EEeeC
Confidence 99874
No 40
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.83 E-value=4.1e-21 Score=158.12 Aligned_cols=89 Identities=33% Similarity=0.492 Sum_probs=77.3
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEE
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMI 399 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~ 399 (465)
+++|+. .+|||+|++||.++.+++.+.+.+|++++++ +.++++|||++|||+|++|++++++|++++||+|+++
T Consensus 2 ~~~g~~---~~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~ 75 (90)
T PF08541_consen 2 ERAGLS---PDDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLV 75 (90)
T ss_dssp HHTT-----GGGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEE
T ss_pred ccccCC---HHHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEE
Confidence 456777 5899999999999999999999999999998 5899999999999999999999999999999999999
Q ss_pred eeCchhhhheeeeEE
Q 039047 400 SFGAGFKCNSCVWEV 414 (465)
Q Consensus 400 sfGaG~~~~~~v~~~ 414 (465)
++|+|++|++++|||
T Consensus 76 ~~G~G~~~~~~~~~~ 90 (90)
T PF08541_consen 76 GFGAGFSWGAAVLRW 90 (90)
T ss_dssp EEETTTEEEEEEEE-
T ss_pred EEEhhheeEEEEEEC
Confidence 999999999999996
No 41
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.78 E-value=1.2e-17 Score=164.91 Aligned_cols=326 Identities=17% Similarity=0.241 Sum_probs=216.6
Q ss_pred ccCCCceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhh
Q 039047 25 EKRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGID 104 (465)
Q Consensus 25 ~~r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~ 104 (465)
...|.+|+|.++.+|+|.. .|+++++..+.+.. .. | -..|+|+.... +...+|
T Consensus 6 ~~~p~dvGI~aieiyfP~~--yV~Q~elEk~d~vs-------~g---K--ytIGLGq~~Mg-------------fcsdrE 58 (462)
T KOG1393|consen 6 SNWPKDVGIIAIEIYFPSQ--YVDQEELEKFDGVS-------AG---K--YTIGLGQTQMG-------------FCSDRE 58 (462)
T ss_pred ccCccccceeEEEEEcCcc--ccChhhHhhcCCcc-------cc---c--eEeccCcceec-------------ccCchh
Confidence 3567899999999999998 69999988754321 11 1 24677776542 222345
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcC--CCCCceeeeecCCcchHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYK--MRKDIKVFNLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lg--l~~~~~~~~l~~~gCs~~~~al~~A~~l 181 (465)
+...|...++++++++.+|+++.|+.|-|++ |...-..|.-..+.+-++ -+.++..+|..+ +|.||..||-.|-++
T Consensus 59 Di~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnavnW 137 (462)
T KOG1393|consen 59 DIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAVNW 137 (462)
T ss_pred hhhhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHhhh
Confidence 6677889999999999999999999999986 445556677788888777 556899999997 999999999999999
Q ss_pred HhcCC--CCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccce
Q 039047 182 FKTYK--NMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCV 259 (465)
Q Consensus 182 l~~g~--~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~ 259 (465)
+++.. .+.+|||++|+.- +-.++-|. .=|.||.|+|++++.... |+ .++..+|+. ..|+ ++
T Consensus 138 iESssWDGr~aivV~gDIAv--Y~~G~aRp------TGGAgAVAmLIgPnApi~----fe-rglr~thM~---hayD-Fy 200 (462)
T KOG1393|consen 138 IESSSWDGRYAIVVCGDIAV--YAKGNARP------TGGAGAVAMLIGPNAPII----FE-RGLRATHMQ---HAYD-FY 200 (462)
T ss_pred hhhcccCCceeEEEEeeEEE--ecCCCCCC------CCCcceEEEEEcCCCceE----ec-ccchhhhhh---hhhh-cc
Confidence 99985 7999999999853 22344443 349999999999876531 21 012233331 1222 33
Q ss_pred eccCCCCCCceecCCChhHHHHHH-HhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEec
Q 039047 260 QTEDEQGRPGFHLGKNLPKAATRA-FVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIH 338 (465)
Q Consensus 260 ~~~d~~G~~g~~l~~d~p~~~~~~-~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H 338 (465)
.| .+..+.|.+.++- +..++..+ ...|......+.++.. +..+.. .+++|++++|
T Consensus 201 KP---------dl~SEyPvVDGklSi~cYl~Al-------d~cY~~~~kK~~~~~~-----~~~~~~---l~~fdy~ifH 256 (462)
T KOG1393|consen 201 KP---------DLLSEYPVVDGKLSIQCYLSAL-------DRCYTVYRKKIAAQWQ-----KSGSDN---LNSFDYIIFH 256 (462)
T ss_pred CC---------CCCCcCceecCeehHHHHHHHH-------HHHHHHHHHHHHHHhc-----cccCcc---cccCCeEEEe
Confidence 22 1223344443321 11122221 2334433333333222 122223 4689999999
Q ss_pred CCCHHH-HHHHHhhC-----------------------------------------CCCcccchhHHHHHhhhccccccH
Q 039047 339 TGGKAV-IDGIGFSL-----------------------------------------DLTEYDLEPARMTLHRFGNTSAAS 376 (465)
Q Consensus 339 ~~~~~i-i~~i~~~L-----------------------------------------gl~~e~~~~s~~~l~~~GNtssas 376 (465)
.+--++ .+.+++.+ .+-.+++.+|...-.+.||+.++|
T Consensus 257 sP~cKlvqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaS 336 (462)
T KOG1393|consen 257 SPYCKLVQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTAS 336 (462)
T ss_pred CchhhhHHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHH
Confidence 655443 33232211 122234444433346889999999
Q ss_pred HHHHHHHHHHcC--CCCCCCEEEEEeeCchhhhheeeeEEEecCC
Q 039047 377 LWYVLAYMEAKK--RLKKGDRVLMISFGAGFKCNSCVWEVVRDLD 419 (465)
Q Consensus 377 i~~~L~~~~~~g--~l~~Gd~vl~~sfGaG~~~~~~v~~~~~~~~ 419 (465)
+...|..++... .--.|.||.+.++|+|.......+|+..+-.
T Consensus 337 ly~~l~sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~ 381 (462)
T KOG1393|consen 337 LYASLASLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDAT 381 (462)
T ss_pred HHHHHHHHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCC
Confidence 999999988865 3347999999999999999999999877544
No 42
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.75 E-value=6.3e-18 Score=153.45 Aligned_cols=166 Identities=17% Similarity=0.246 Sum_probs=122.8
Q ss_pred CCCceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccce--EeecCccccCCCCCCChhhhhh
Q 039047 27 RDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQ--TYSPRIMFAGREDNPTLQDGID 104 (465)
Q Consensus 27 r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r--~~~~~~~~~~~~~~~t~~~~~~ 104 (465)
||++|+|.+++.|.|.. +++.+++.++-+ .++. |+. .||+++ .+.++ .|
T Consensus 1 ~p~~VGI~~i~~y~p~~--~v~~~~La~~~g----~d~~------K~~--~glgq~~~av~~~---------------~E 51 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPRY--YVDQEELAEARG----VDPG------KYT--IGLGQEKMAVPPP---------------DE 51 (174)
T ss_dssp --SSEEEEEEEEE-ESE--EEEHHHHHHHTT----S-TC------HHH--TTT--SEEEE--T---------------TS
T ss_pred CCccccEeEEEEecCce--EecHHHHHHHhC----CCHH------Hhh--hhcCeeEEEeCCC---------------cc
Confidence 78999999999999996 899999887642 2332 443 355554 44332 24
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCC--CCCceeeeecCCcchHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKM--RKDIKVFNLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl--~~~~~~~~l~~~gCs~~~~al~~A~~l 181 (465)
++..|+..|++++|++.+++|++|+.|+++| |..+...+.+.+|++.||+ +.++..+++.+ +|.|++.||+.|.++
T Consensus 52 D~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~-ACygGTaAL~~a~~~ 130 (174)
T PF01154_consen 52 DIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQ-ACYGGTAALQNAVNW 130 (174)
T ss_dssp -HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEES-GGGHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehhh-hhHHHHHHHHHHHHH
Confidence 6778999999999999999999999999987 6666788899999999999 45789999996 999999999999999
Q ss_pred HhcCC--CCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCC
Q 039047 182 FKTYK--NMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKR 230 (465)
Q Consensus 182 l~~g~--~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~ 230 (465)
++++. .+++|||++|+.-. -.+.. ...-|-||+|+|++.+.
T Consensus 131 v~s~~~~g~~aLVVasDiA~y--~~g~~------e~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 131 VASSPWDGRKALVVASDIARY--DLGSA------EPTQGAGAVAMLIGPNA 173 (174)
T ss_dssp HCSTTSTTEEEEEEEEEEE----STTTT------GGG-EEEEEEEEEECS-
T ss_pred HhcCCCCCCeEEEEecccccc--CCCCc------cccccceeEEEEecCCC
Confidence 99975 68999999999642 12211 34679999999999753
No 43
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.73 E-value=3.4e-16 Score=154.93 Aligned_cols=116 Identities=12% Similarity=0.203 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcC
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTY 185 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g 185 (465)
..+|+.+|+++||+++|++++|||.+|+++.+. .+..+..+++.||+ +.+++++ +|++++.||.+|..++++|
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~--Q~~~As~vA~~LGI----P~fdV~~-ACSTf~~AL~lAa~lI~SG 122 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVDFFLAGDLLN--QIITANFVARDLGI----PFLGLYG-ACSTSMETLALGAMLVDGG 122 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCC--cccHHHHHHHHhCC----CEEEEec-cCHHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999999876543 34568899999997 4599996 9999999999999999999
Q ss_pred CCCEEEEEEecCCCC---C--CC-CC--CCccchhhhhhccccceEEEEecCCc
Q 039047 186 KNMNAMVVTSESLSP---N--WY-SG--NDRSMILANCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 186 ~~~~aLVV~~E~~s~---~--~~-~~--~dr~~~~~~~lfgDGaaA~lLs~~~~ 231 (465)
..++||||++|..|. . +. .+ +++.+ ..+|+|||+|+||++.+.
T Consensus 123 ~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~t---a~~tgdGAGA~vl~~~~~ 173 (327)
T TIGR02845 123 FADRVLAATSSHYATAERQFRYPTEYGVQKPPT---AQWTVTGAGAVLLASTGG 173 (327)
T ss_pred CCCEEEEEEecccchhhhhcccccccccCCCCe---eeEEEcccEEEEEeecCC
Confidence 999999999998872 1 11 12 45554 789999999999998754
No 44
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.73 E-value=2.1e-16 Score=161.62 Aligned_cols=311 Identities=15% Similarity=0.092 Sum_probs=194.0
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHH-----HHHHHHcCccceEeecCccccCCCCCCChhhhh
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFL-----LKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGI 103 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~-----~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~ 103 (465)
.+++|++.|+..|=. .+.+.....++ .+--..+...++ +++..++|+.+|++. ..
T Consensus 3 ~~v~I~~~g~vs~lG---~~~~~~~aa~r-agi~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----------------~~ 62 (348)
T PRK06147 3 RALAIVGSGMVTAVG---LDAPSSCAAIR-ARLDNFQETRFIDPPGGEWLIGAPVPLPPPWR----------------GP 62 (348)
T ss_pred CceEEEecceeecCc---CCHHHHHHHHH-cccccccccccccCCCCCceEeecCcCCcccC----------------ch
Confidence 469999999999976 55666555553 220011110110 123333444333221 12
Q ss_pred hhHHHHHHHHHHHHHHHcC-CCcCCcCEEEEeec------CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHH
Q 039047 104 DEMEEFFEDSIAKILDRSG-ISPKEIDILVVNIS------MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVD 176 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~ag-i~~~dId~li~~~s------~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~ 176 (465)
+...+|+..|++++|++++ +++++||++|+.++ +....|.+...++.++|+....+.++++. +|++++.||.
T Consensus 63 ~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~-~casg~~Al~ 141 (348)
T PRK06147 63 ERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIAR-GRVSGAVALA 141 (348)
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccc-cchHHHHHHH
Confidence 3457899999999999999 79999999887532 22334467889999999965567899995 9999999999
Q ss_pred HHHHHHhcCCCCEEEEEEecCCCCC----CC------CCCCccchhhhhhccccceEEEEecCCccccccceeeeceEEe
Q 039047 177 IVRSVFKTYKNMNAMVVTSESLSPN----WY------SGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRT 246 (465)
Q Consensus 177 ~A~~ll~~g~~~~aLVV~~E~~s~~----~~------~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t 246 (465)
.|.++|+.|..+.+||+++|..+.. ++ ...++.. ..+|||||+++||++.+....+ .-++.. .
T Consensus 142 ~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~~---G~v~GEGA~a~vLe~~~~A~~r-ga~i~a---~ 214 (348)
T PRK06147 142 QARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNSN---GFIPGEAAAAVLLGRPAGGEAP-GLPLLG---L 214 (348)
T ss_pred HHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCCC---ceeeeceEEEEEEccHhhhhcC-CCceEE---E
Confidence 9999999999999999999987651 10 0122222 6799999999999986543211 112111 1
Q ss_pred eeCCCCCCCccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCC
Q 039047 247 HHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGV 326 (465)
Q Consensus 247 ~~~sd~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~ 326 (465)
..+.+...+ +.+.+.|. .++. +. ...+..+ +++|+.
T Consensus 215 g~~~~~~~~---------------~~~~~~p~-~g~g------------------l~----~ai~~AL-----~~agl~- 250 (348)
T PRK06147 215 GLGREPAPV---------------GESEDLPL-RGDG------------------LT----QAIRAAL-----AEAGCG- 250 (348)
T ss_pred EEeecCCCc---------------ccCCCCCC-ChHH------------------HH----HHHHHHH-----HHcCCC-
Confidence 111111000 00000010 0110 11 1222333 346777
Q ss_pred CccCCccEEEecCCCHHHHHH-----HHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHH--cCCCCCCCEEEEE
Q 039047 327 NFRTGVDHFCIHTGGKAVIDG-----IGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEA--KKRLKKGDRVLMI 399 (465)
Q Consensus 327 ~~~~did~~~~H~~~~~ii~~-----i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~--~g~l~~Gd~vl~~ 399 (465)
.+|||+++.|..|....+. +.+.++-..+... -+.+-..+||+++|+-.+.+..... +...-+|++++++
T Consensus 251 --~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~-~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~ 327 (348)
T PRK06147 251 --LEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFD-LWHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCH 327 (348)
T ss_pred --HHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCc-eecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEE
Confidence 4899999999776654333 3334543222211 1355678999999999888876432 2345579999999
Q ss_pred eeCchhhhheeeeEE
Q 039047 400 SFGAGFKCNSCVWEV 414 (465)
Q Consensus 400 sfGaG~~~~~~v~~~ 414 (465)
+..-.-..++++++.
T Consensus 328 s~~d~g~r~a~~l~~ 342 (348)
T PRK06147 328 LSDDDGARAALVLEY 342 (348)
T ss_pred ecCCCCceEEEEEec
Confidence 998888889999885
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.59 E-value=8.4e-14 Score=138.34 Aligned_cols=117 Identities=17% Similarity=0.227 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcC
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTY 185 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g 185 (465)
..+|+.+|+++||+++|++++|||.+|+++... .+..+..+++.||+ +.+++.+ +|+++..||.+|..++++|
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID~lI~Gdll~--Q~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG 128 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN--QIISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGG 128 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC--CcchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcC
Confidence 358999999999999999999999999986533 34568899999986 6899996 9999999999999999999
Q ss_pred CCCEEEEEEecCCCCC---CCCC----CCccchhhhhhccccceEEEEecCCc
Q 039047 186 KNMNAMVVTSESLSPN---WYSG----NDRSMILANCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 186 ~~~~aLVV~~E~~s~~---~~~~----~dr~~~~~~~lfgDGaaA~lLs~~~~ 231 (465)
..++||||++|..+.- |..+ ..|.. +...+++||+|+||++...
T Consensus 129 ~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~--taqwtvtGAGA~i~~~~~~ 179 (337)
T PRK08304 129 FADRVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAVLLSREGS 179 (337)
T ss_pred CCCEEEEEEcchhhhhhhhccCchhccccCCC--cceEEeeccEEEEEecCCC
Confidence 9999999999998762 3222 22221 2678999999999998754
No 46
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.57 E-value=2.1e-13 Score=141.83 Aligned_cols=185 Identities=12% Similarity=0.161 Sum_probs=120.0
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhc-cCCcchHHHHHHHHHHcCccceE--eecCccc--cCCCCCCChhhhh
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTK-NLGLNEYKFLLKAIVSSGIGEQT--YSPRIMF--AGREDNPTLQDGI 103 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~-~~~~~~~~f~~ki~~~sGI~~r~--~~~~~~~--~~~~~~~t~~~~~ 103 (465)
++|+|++++|..|.. .+.+++.+.+.... .+.+-. + .+..+...+. .++.... ..+ +......
T Consensus 1 ~~i~I~G~g~~~p~g---~~~~~~~~~l~~g~~~~~~~~-----~-~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~ 68 (406)
T cd00834 1 RRVVITGLGAVTPLG---NGVEEFWEALLAGRSGIRPIT-----R-FDASGFPSRIAGEVPDFDPEDYLD---RKELRRM 68 (406)
T ss_pred CcEEEECcceeCCCc---CCHHHHHHHHHcCCCeeEECC-----c-ccccCCCccEEEEcCCCChhhcCC---HHHhccC
Confidence 379999999999986 67888888764321 011000 0 0011111111 1111000 000 0111122
Q ss_pred hhHHHHHHHHHHHHHHHcCCCcCCcCE----EEEeecCC---------------------------CCCChHHHHHHHHc
Q 039047 104 DEMEEFFEDSIAKILDRSGISPKEIDI----LVVNISMI---------------------------AIMPSLSSRIINRY 152 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~agi~~~dId~----li~~~s~~---------------------------~~~Ps~a~~i~~~l 152 (465)
.....|+..|+++||+++|+++++||. ++++++.. ...+..+.+|+..|
T Consensus 69 ~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 148 (406)
T cd00834 69 DRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRL 148 (406)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHh
Confidence 356789999999999999999877663 44443211 12245788999999
Q ss_pred CCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCC----------------------CCCCCCCccc
Q 039047 153 KMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSP----------------------NWYSGNDRSM 210 (465)
Q Consensus 153 gl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~----------------------~~~~~~dr~~ 210 (465)
|++ .+.+.++. +|++++.||..|.++|++|..+++||+++|..+. ...+...+.
T Consensus 149 gl~--g~~~~v~~-acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~- 224 (406)
T cd00834 149 GLR--GPNYTVST-ACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDR- 224 (406)
T ss_pred CCC--Ccccccch-HHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCC-
Confidence 996 47889995 9999999999999999999999999999998761 011111111
Q ss_pred hhhhhhccccceEEEEecCCc
Q 039047 211 ILANCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 211 ~~~~~lfgDGaaA~lLs~~~~ 231 (465)
...++||||+|+||++.+.
T Consensus 225 --~g~~~geGA~a~vL~~~~~ 243 (406)
T cd00834 225 --DGFVLGEGAGVLVLESLEH 243 (406)
T ss_pred --CCEeeeccEEEEEEecHHH
Confidence 1578999999999997654
No 47
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.53 E-value=3.4e-13 Score=139.87 Aligned_cols=95 Identities=14% Similarity=0.193 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
...+|+.+|+++||+++|++++|||.||++++ ++...|..+..++..+|++++++++++++ +|++++.+|.+|.++++
T Consensus 21 ~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~~-~c~s~~~al~~A~~~I~ 99 (386)
T cd00751 21 SADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVNR-VCGSGLQAVALAAQSIA 99 (386)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhcc-ccHHHHHHHHHHHHHHH
Confidence 35799999999999999999999999998753 44556777888999999985589999995 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..++|||+++|.+|.
T Consensus 100 sG~~~~vLv~g~e~~s~ 116 (386)
T cd00751 100 AGEADVVVAGGVESMSR 116 (386)
T ss_pred CCCCCeEEEeeeecccc
Confidence 99999999999998653
No 48
>PRK09051 beta-ketothiolase; Provisional
Probab=99.47 E-value=2.8e-12 Score=133.27 Aligned_cols=95 Identities=16% Similarity=0.140 Sum_probs=81.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCC-ChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNI-SMIAIM-PSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~-Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
...+|+.+|++++|+++|++|+|||.||+++ ++.... +..+..+...+|++.++++++++. +|++|+.|+.+|.+++
T Consensus 26 ~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~~-aCaSg~~Al~~A~~~I 104 (394)
T PRK09051 26 APTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVNR-LCGSGLQAIVSAAQAI 104 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEecc-cchHHHHHHHHHHHHH
Confidence 3579999999999999999999999999975 344433 345566667789975689999995 9999999999999999
Q ss_pred hcCCCCEEEEEEecCCCC
Q 039047 183 KTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 183 ~~g~~~~aLVV~~E~~s~ 200 (465)
++|..+++||+++|++|.
T Consensus 105 ~sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 105 LLGDADVAIGGGAESMSR 122 (394)
T ss_pred HcCCCCEEEEEeehhccc
Confidence 999999999999998874
No 49
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.47 E-value=3e-12 Score=133.14 Aligned_cols=95 Identities=12% Similarity=0.220 Sum_probs=84.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
...+|+.+|++++|+++|++|+|||.||++++ +....+..+..++..+|++..+++++++. +|++|+.++.+|.++++
T Consensus 25 ~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~~-~Casg~~ai~~A~~~I~ 103 (393)
T PRK05656 25 PAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNK-VCGSGLKALHLAAQAIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEecc-cchhHHHHHHHHHHHHH
Confidence 35799999999999999999999999999754 33345667788999999985589999995 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+.+||+++|.+|.
T Consensus 104 sG~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 104 CGDAEVIIAGGQENMSL 120 (393)
T ss_pred cCCCCEEEEEEEhhhcc
Confidence 99999999999998764
No 50
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.47 E-value=6.4e-12 Score=131.70 Aligned_cols=122 Identities=14% Similarity=0.179 Sum_probs=94.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcC----EEEEeec-CCCC-------------------CChHHHHHHHHcCCCCCcee
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEID----ILVVNIS-MIAI-------------------MPSLSSRIINRYKMRKDIKV 160 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId----~li~~~s-~~~~-------------------~Ps~a~~i~~~lgl~~~~~~ 160 (465)
....|+..|+++||+++|+++++|| .|+++++ .++. .+..+..|+..+|++ -+.
T Consensus 86 ~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~ 163 (424)
T smart00825 86 PQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPS 163 (424)
T ss_pred HHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCc
Confidence 4467999999999999999999998 7777643 2211 345778899999997 378
Q ss_pred eeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCC----------C------CCCCCccchhhhhhccccceEE
Q 039047 161 FNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPN----------W------YSGNDRSMILANCLFRSGGAVI 224 (465)
Q Consensus 161 ~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~----------~------~~~~dr~~~~~~~lfgDGaaA~ 224 (465)
+.++. +|++++.||..|.++|++|..+.+||+++|..... + ..+.+.. -...++||||+|+
T Consensus 164 ~~v~~-acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaal 240 (424)
T smart00825 164 VTVDT-ACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDAD--ADGYVRGEGVGVV 240 (424)
T ss_pred ccccc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCC--CCcccccceEEEE
Confidence 99995 99999999999999999999999999999974320 0 1111111 1267899999999
Q ss_pred EEecCCc
Q 039047 225 LLSNKRS 231 (465)
Q Consensus 225 lLs~~~~ 231 (465)
||++...
T Consensus 241 VLe~~e~ 247 (424)
T smart00825 241 VLKRLSD 247 (424)
T ss_pred EEccHHH
Confidence 9997543
No 51
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.46 E-value=2.2e-12 Score=133.81 Aligned_cols=95 Identities=14% Similarity=0.219 Sum_probs=83.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
...+|+.+|+++||+++|++++|||.||+++. +....|..+..++..+|++.+++++++++ +|++++.++.+|.++++
T Consensus 20 t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~-~Casg~~al~~A~~~I~ 98 (386)
T TIGR01930 20 SAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVNR-QCASGLQAVILAAQLIR 98 (386)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeecc-hhhHHHHHHHHHHHHHH
Confidence 45799999999999999999999999998653 44445777888999999985689999995 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+++||+++|..|.
T Consensus 99 sG~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 99 AGEADVVVAGGVESMSR 115 (386)
T ss_pred CCCCCEEEEEEehhhcc
Confidence 99999999999998654
No 52
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.44 E-value=5.7e-12 Score=131.12 Aligned_cols=95 Identities=15% Similarity=0.156 Sum_probs=80.5
Q ss_pred hHHHHHHHHHHHHHHHc-CCCcCCcCEEEEee-cCCCCCChHHHHH-HHHcCCCCCceeeeecCCcchHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRS-GISPKEIDILVVNI-SMIAIMPSLSSRI-INRYKMRKDIKVFNLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~a-gi~~~dId~li~~~-s~~~~~Ps~a~~i-~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~l 181 (465)
...+|+.+|++++|+++ |++++|||.||+++ .++...|....++ ...+|++..+++++++. +|++|+.|+..|..+
T Consensus 30 s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~-aCaSg~~Al~~A~~~ 108 (399)
T PRK09052 30 RPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVNR-FCASGLQAVAMAADR 108 (399)
T ss_pred CHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeecc-hhhHHHHHHHHHHHH
Confidence 45799999999999997 99999999999975 4454445555554 45559974589999995 999999999999999
Q ss_pred HhcCCCCEEEEEEecCCCC
Q 039047 182 FKTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 182 l~~g~~~~aLVV~~E~~s~ 200 (465)
+++|..+.+||+++|.+|.
T Consensus 109 I~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 109 IRVGEADVMIAAGVESMSM 127 (399)
T ss_pred HHCCCCCEEEEEEEecccc
Confidence 9999999999999998864
No 53
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.42 E-value=1.5e-11 Score=127.71 Aligned_cols=94 Identities=12% Similarity=0.146 Sum_probs=82.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCC--CCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIA--IMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~--~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~l 181 (465)
...+|+.+|++++|+++|+++++||.||++++ ++. ..|..+..++..+|++ ..+.+++++ +|++++.+|..|.++
T Consensus 21 ~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~-aCasg~~ai~~A~~~ 98 (389)
T PRK06064 21 SLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVEA-ACASGGAALRQAYLA 98 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEeC-CcHHHHHHHHHHHHH
Confidence 35699999999999999999999999998653 333 2466788999999997 688999995 999999999999999
Q ss_pred HhcCCCCEEEEEEecCCCC
Q 039047 182 FKTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 182 l~~g~~~~aLVV~~E~~s~ 200 (465)
|++|..+++||+++|..|.
T Consensus 99 I~sG~~~~vLv~G~e~~s~ 117 (389)
T PRK06064 99 VASGEADVVLAAGVEKMTD 117 (389)
T ss_pred HHCCCCCEEEEEEEEeccc
Confidence 9999999999999997653
No 54
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.40 E-value=1.5e-11 Score=127.64 Aligned_cols=95 Identities=12% Similarity=0.099 Sum_probs=86.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCC-C-CChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIA-I-MPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~-~-~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
.+.+|+..+++.+++++|++|++||.||+.+.... . .++++.++.-..|++..++.+.++ +.|+|++.|+.+|.+.|
T Consensus 28 ~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa~~I 106 (417)
T PRK06025 28 HPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAAAQI 106 (417)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHHHHH
Confidence 46799999999999999999999999999764222 2 477889999999999999999999 69999999999999999
Q ss_pred hcCCCCEEEEEEecCCCC
Q 039047 183 KTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 183 ~~g~~~~aLVV~~E~~s~ 200 (465)
++|..+.+|+.+.|.+|.
T Consensus 107 ~~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 107 MSGMEDLVIAGGTEMMSY 124 (417)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999985
No 55
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.40 E-value=1e-11 Score=128.92 Aligned_cols=95 Identities=12% Similarity=0.138 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCC-hHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMP-SLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~P-s~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
.+.+|+.+|++++|+++|++|++||.||+++ +++...| ..+..+..++|++.++++++++ .+|++|+.|+.+|.+++
T Consensus 26 ~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~~~I 104 (392)
T PRK07108 26 HGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAAQRV 104 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHH
Confidence 3579999999999999999999999999965 4454444 4888999999998679999999 59999999999999999
Q ss_pred hcCCCCEEEEEEecCCCC
Q 039047 183 KTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 183 ~~g~~~~aLVV~~E~~s~ 200 (465)
++|..+.+|+++.|++|.
T Consensus 105 ~sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 105 IAGEGDVFVAGGVESISC 122 (392)
T ss_pred HCCCCCEEEEEEEeccCC
Confidence 999999999999999874
No 56
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.40 E-value=2.5e-11 Score=126.63 Aligned_cols=124 Identities=15% Similarity=0.124 Sum_probs=91.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCCcCC-cC----EEEEeecCC-----------------------CCC--ChHHHHHHHHcC
Q 039047 104 DEMEEFFEDSIAKILDRSGISPKE-ID----ILVVNISMI-----------------------AIM--PSLSSRIINRYK 153 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~agi~~~d-Id----~li~~~s~~-----------------------~~~--Ps~a~~i~~~lg 153 (465)
+....|+..|+++||+++|+++++ ++ .+++.++.. ... ...+..|...+|
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T cd00828 70 DRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLL 149 (407)
T ss_pred CHHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhC
Confidence 345689999999999999998866 43 233433211 111 457789999999
Q ss_pred CCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCC--------------------CCCCCCccchhh
Q 039047 154 MRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPN--------------------WYSGNDRSMILA 213 (465)
Q Consensus 154 l~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~--------------------~~~~~dr~~~~~ 213 (465)
++ .-+.+.+++ +|++++.||..|.++|++|..+.+||+++|..++. ...+.|+. -.
T Consensus 150 l~-~Gp~~tv~~-aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~--~~ 225 (407)
T cd00828 150 SS-HGPIKTPVG-ACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDET--RD 225 (407)
T ss_pred cC-CCCCcCccc-HHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCC--CC
Confidence 93 257899995 99999999999999999999999999999986510 00111111 12
Q ss_pred hhhccccceEEEEecCCc
Q 039047 214 NCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 214 ~~lfgDGaaA~lLs~~~~ 231 (465)
.+++||||+++||++.+.
T Consensus 226 G~~~gEGAaalvLe~~~~ 243 (407)
T cd00828 226 GFVEAEGAGVLVLERAEL 243 (407)
T ss_pred cEEeecceEEEEEeeHHH
Confidence 678999999999998654
No 57
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.40 E-value=2.2e-11 Score=126.31 Aligned_cols=93 Identities=14% Similarity=0.122 Sum_probs=79.4
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCC--CChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAI--MPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~--~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
+..+|+.+|+++||+++|++++|||.||++++++.. .+..+..+++.||++ ..+++++++ +|+++..++..|.++|
T Consensus 23 s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~~-~casg~~al~~A~~~I 100 (386)
T PRK08313 23 SMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVHT-AGSVGGSTAVVAASLV 100 (386)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEec-cCHHHHHHHHHHHHHH
Confidence 346999999999999999999999999987644321 122336899999997 678999996 9999999999999999
Q ss_pred hcCCCCEEEEEEecCCC
Q 039047 183 KTYKNMNAMVVTSESLS 199 (465)
Q Consensus 183 ~~g~~~~aLVV~~E~~s 199 (465)
++|..++||||++|..+
T Consensus 101 ~sG~~~~vLVvg~e~~s 117 (386)
T PRK08313 101 QSGVYRRVLAVAWEKQS 117 (386)
T ss_pred HCCCCCEEEEEEEEEcc
Confidence 99999999999999764
No 58
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.39 E-value=2.6e-11 Score=125.17 Aligned_cols=94 Identities=16% Similarity=0.139 Sum_probs=83.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
+..+|+.+|++++|+++|+++++||.+++.++ .....+..+..++..+|++ .++.++++ .+|++++.++..|.++++
T Consensus 15 ~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~I~ 92 (375)
T cd00829 15 SPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAAIA 92 (375)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHHHH
Confidence 45799999999999999999999999998653 3333577889999999997 78999999 499999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+.|||+++|..+.
T Consensus 93 sG~~~~vlv~g~e~~s~ 109 (375)
T cd00829 93 SGLADVVLVVGAEKMSD 109 (375)
T ss_pred hCCCCEEEEEEEeeccc
Confidence 99999999999998764
No 59
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.38 E-value=3.5e-11 Score=125.10 Aligned_cols=95 Identities=12% Similarity=0.166 Sum_probs=82.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCC-ChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIM-PSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~-Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
.+.+|+..|++++|+++|++|++||.||+++. +.... +..+.......|++.++++++++ ++|++|+.||.+|.+++
T Consensus 27 ~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~~~I 105 (402)
T PRK08242 27 KPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAAAKV 105 (402)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHHHHH
Confidence 46799999999999999999999999999754 43332 34566667888997679999999 59999999999999999
Q ss_pred hcCCCCEEEEEEecCCCC
Q 039047 183 KTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 183 ~~g~~~~aLVV~~E~~s~ 200 (465)
++|..+.+|++++|++|.
T Consensus 106 ~sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 106 RSGWDDLVIAGGVESMSR 123 (402)
T ss_pred HcCCCCEEEEEEEEccCC
Confidence 999999999999999885
No 60
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.37 E-value=5.8e-13 Score=107.21 Aligned_cols=79 Identities=24% Similarity=0.437 Sum_probs=59.9
Q ss_pred eeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCccccccceee
Q 039047 161 FNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRSLERNALFKL 240 (465)
Q Consensus 161 ~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L 240 (465)
||+++ +|++++.||++|.++++++..++||||++|..+. +.++.++.. ..+|||||+|+||++.+.. .++
T Consensus 1 fDi~~-~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~~~~~---~~~~gDgAaA~vl~~~~~~----~~~- 70 (80)
T PF08545_consen 1 FDINQ-ACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRTDRQT---AFIFGDGAAAVVLSRDEEG----GFG- 70 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTTHHHH---HTTB-EEEEEEEEEEESSS----SCE-
T ss_pred Ccccc-cchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccccccCc---ceeecchheEEEEEecCCC----CCe-
Confidence 79995 9999999999999999999999999999999987 444444443 5799999999999997432 233
Q ss_pred eceEEeeeCCC
Q 039047 241 KCLVRTHHGAR 251 (465)
Q Consensus 241 ~~~~~t~~~sd 251 (465)
++.+++.+|
T Consensus 71 --il~~~~~td 79 (80)
T PF08545_consen 71 --ILDSHLRTD 79 (80)
T ss_dssp --EEEEEEEE-
T ss_pred --EEEEEEEcC
Confidence 444555554
No 61
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.36 E-value=6.6e-11 Score=117.17 Aligned_cols=117 Identities=14% Similarity=0.257 Sum_probs=92.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhc
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKT 184 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~ 184 (465)
...+|+.+|+++||+++|++++|||.+++++......|+ ..+++.||++ .+++.+ +|+++..||.+|..++++
T Consensus 53 AE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~g-ACSTg~eAL~lAa~~VaS 125 (334)
T PRK12404 53 AERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLFG-ACSTSMEGLALAALIVNS 125 (334)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----ccceee-cCHHHHHHHHHHHHHHHc
Confidence 445899999999999999999999999998766656665 4899999954 599997 999999999999999999
Q ss_pred CCCCEEEEEEecCCCC---CCCC----CCCccchhhhhhccccceEEEEecCC
Q 039047 185 YKNMNAMVVTSESLSP---NWYS----GNDRSMILANCLFRSGGAVILLSNKR 230 (465)
Q Consensus 185 g~~~~aLVV~~E~~s~---~~~~----~~dr~~~~~~~lfgDGaaA~lLs~~~ 230 (465)
|..++||++++-..+. .|.. +..|.. +...=--||+|+||++..
T Consensus 126 G~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~--taqwTvTgaga~~l~~~~ 176 (334)
T PRK12404 126 GGAKYVLTGASSHNAAVEKQFRYPTEYGGQKPP--TAQWTVTGAGAAILSKTG 176 (334)
T ss_pred CCCCEEEEEeCcccchhhhhccCcccccCcCCC--cccEEEEceEEEEEecCC
Confidence 9999999998866432 2211 222321 133346789999999764
No 62
>PRK05790 putative acyltransferase; Provisional
Probab=99.34 E-value=8.3e-11 Score=122.40 Aligned_cols=94 Identities=14% Similarity=0.214 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
...+|+.+|+++||+++|++++|||.||+++. +....+..+..++..+|++.++++++++. +|++++.+|.+|.++++
T Consensus 25 ~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~~-~Casg~~al~~A~~~I~ 103 (393)
T PRK05790 25 SAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTINK-VCGSGLKAVALAAQAIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeecc-cchHHHHHHHHHHHHHH
Confidence 45799999999999999999999999998653 22223444555777789875578999995 99999999999999999
Q ss_pred cCCCCEEEEEEecCCC
Q 039047 184 TYKNMNAMVVTSESLS 199 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s 199 (465)
+|..+++||+++|..|
T Consensus 104 sG~~d~vLv~G~e~~s 119 (393)
T PRK05790 104 AGDADIVVAGGQESMS 119 (393)
T ss_pred cCCCCEEEEEeeeccc
Confidence 9999999999999764
No 63
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.34 E-value=1.8e-10 Score=120.07 Aligned_cols=187 Identities=10% Similarity=0.118 Sum_probs=116.4
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhc-cCCcchHHHHHHHHHHcCccceE--eecCccccCCCC-CCChhhhhh
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTK-NLGLNEYKFLLKAIVSSGIGEQT--YSPRIMFAGRED-NPTLQDGID 104 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~-~~~~~~~~f~~ki~~~sGI~~r~--~~~~~~~~~~~~-~~t~~~~~~ 104 (465)
++|.|+++|+..|-. .+.+++.+.+..-. .+.+- .+ +...+...+. .++. +..... .++-.....
T Consensus 1 ~~v~ItG~g~~~p~g---~~~~~~~~~l~~g~s~~~~~-----~~-~~~~~~~~~~~g~i~~--f~~~~~~~~~~~~~~~ 69 (407)
T TIGR03150 1 RRVVVTGLGAVTPLG---NGVEEFWENLLAGKSGIGPI-----TR-FDASDLPVKIAGEVKD--FDPEDYIDKKEARRMD 69 (407)
T ss_pred CcEEEEcceEECCCc---CCHHHHHHHHHcCCCeeEEC-----Cc-ccccCCCCcEEEEeCC--cChhhcCCHHHHhhcC
Confidence 378999999999986 68888888775321 01110 00 0001111110 0110 000000 001111123
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCE----EEEeecCC------------------C--------CCC-hHHHHHHHHcC
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDI----LVVNISMI------------------A--------IMP-SLSSRIINRYK 153 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~----li~~~s~~------------------~--------~~P-s~a~~i~~~lg 153 (465)
...+|+..|++++|+++|+++++||. +++.++.. . ..+ ..+.+|...+|
T Consensus 70 ~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T TIGR03150 70 RFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYG 149 (407)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhC
Confidence 44689999999999999999999886 55543211 0 011 24567888999
Q ss_pred CCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCC-----------C--C--------CCCCccchh
Q 039047 154 MRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPN-----------W--Y--------SGNDRSMIL 212 (465)
Q Consensus 154 l~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~-----------~--~--------~~~dr~~~~ 212 (465)
++ .+.+.+.. +|++++.||..|..+|++|..+.+||+++|..... + + .+-++. -
T Consensus 150 l~--g~~~~v~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~--~ 224 (407)
T TIGR03150 150 AK--GPNHAVVT-ACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKD--R 224 (407)
T ss_pred CC--Cccccccc-HHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCC--C
Confidence 96 57888995 99999999999999999999999999999973210 0 0 000111 0
Q ss_pred hhhhccccceEEEEecCCc
Q 039047 213 ANCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 213 ~~~lfgDGaaA~lLs~~~~ 231 (465)
...++||||+|+||++.+.
T Consensus 225 ~g~~~gEGAaalvL~~~~~ 243 (407)
T TIGR03150 225 DGFVMGEGAGVLVLEELEH 243 (407)
T ss_pred CcEEEeceEEEEEEeeHHH
Confidence 1567899999999997653
No 64
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.34 E-value=1.2e-10 Score=121.65 Aligned_cols=122 Identities=16% Similarity=0.206 Sum_probs=93.1
Q ss_pred hhHHHHHHHHHHHHHHHcCCCcCCcCE----EEEeec-CC-------------------CCCChHHHHHHHHcCCCCCce
Q 039047 104 DEMEEFFEDSIAKILDRSGISPKEIDI----LVVNIS-MI-------------------AIMPSLSSRIINRYKMRKDIK 159 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~agi~~~dId~----li~~~s-~~-------------------~~~Ps~a~~i~~~lgl~~~~~ 159 (465)
.....|+..|+++||+++|++++++|. ++++++ .+ ...+..+..++..+|++ .+
T Consensus 85 ~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~ 162 (421)
T cd00833 85 DPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GP 162 (421)
T ss_pred CHHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CC
Confidence 345789999999999999999888774 555432 11 11245678899999996 48
Q ss_pred eeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCC-----------------CCCCCCccchhhhhhccccce
Q 039047 160 VFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPN-----------------WYSGNDRSMILANCLFRSGGA 222 (465)
Q Consensus 160 ~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~-----------------~~~~~dr~~~~~~~lfgDGaa 222 (465)
.+.+.+ +|++++.||..|.++|++|..+.+||+++|..+.. ..+...+. ...++||||+
T Consensus 163 ~~~v~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~---~g~~~geGAa 238 (421)
T cd00833 163 SLTVDT-ACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADA---DGYVRGEGVG 238 (421)
T ss_pred ceeecc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCC---CCeeeeceEE
Confidence 899995 99999999999999999999999999999985310 01111111 2578999999
Q ss_pred EEEEecCCc
Q 039047 223 VILLSNKRS 231 (465)
Q Consensus 223 A~lLs~~~~ 231 (465)
|+||++.+.
T Consensus 239 alvL~~~~~ 247 (421)
T cd00833 239 VVVLKRLSD 247 (421)
T ss_pred EEEEeeHHH
Confidence 999997654
No 65
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.34 E-value=5.2e-11 Score=123.96 Aligned_cols=95 Identities=12% Similarity=0.129 Sum_probs=79.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
...+|+.+|++++|+++|++|+|||.||++++ +.....+........+|++.++++++++ .+|++|+.|+..|.++++
T Consensus 30 ~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~I~ 108 (397)
T PRK06954 30 TAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDMLV 108 (397)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHHHH
Confidence 35799999999999999999999999999754 3333334444455567787669999999 499999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+.+||+++|.+|.
T Consensus 109 sG~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 109 AGSVDVIVAGGMESMTN 125 (397)
T ss_pred CCCCCEEEEEeeeccCC
Confidence 99999999999999883
No 66
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.34 E-value=3e-10 Score=119.38 Aligned_cols=182 Identities=13% Similarity=0.184 Sum_probs=114.1
Q ss_pred ceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHHH
Q 039047 30 ECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEF 109 (465)
Q Consensus 30 ~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~l 109 (465)
+|.|.++|+-.|-. .+.+++.+.+..-. -..... .+ +...++..+-...-. .. ++. .+. .......+
T Consensus 12 ~VvITG~G~vs~~G---~~~~~~~~~L~~G~-s~i~~~---~~-~~~~~~~~~~~g~~~-~~-~~~--~~~-~~~~~~~~ 78 (425)
T PRK06501 12 IVAVTGMGVVTSLG---QGKADNWAALTAGE-SGIHTI---TR-FPTEGLRTRIAGTVD-FL-PES--PFG-ASALSEAL 78 (425)
T ss_pred CEEEEeeeEECCCC---CCHHHHHHHHHcCC-CceEcC---Cc-ccccCCCCceEEEEe-ec-ccc--ccc-ccCHHHHH
Confidence 69999999999986 68888888775321 000000 00 011112111100000 00 010 010 11124568
Q ss_pred HHHHHHHHHHHcCCCcCCcC------------------EEEEeec----------------CCC-------CCChHHHHH
Q 039047 110 FEDSIAKILDRSGISPKEID------------------ILVVNIS----------------MIA-------IMPSLSSRI 148 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId------------------~li~~~s----------------~~~-------~~Ps~a~~i 148 (465)
+..|++++|+++|+++.+++ .++..+. +.. ..|+++.+|
T Consensus 79 ~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 158 (425)
T PRK06501 79 ARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADRL 158 (425)
T ss_pred HHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHHH
Confidence 89999999999999654422 1111111 011 345788999
Q ss_pred HHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecC---------------CCCCC-------CCC-
Q 039047 149 INRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSES---------------LSPNW-------YSG- 205 (465)
Q Consensus 149 ~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~---------------~s~~~-------~~~- 205 (465)
+..+|++ .++++++. +|++++.||..|.++|++|..+.+||+++|. ++..- .+.
T Consensus 159 ~~~~gl~--G~~~~i~~-aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd 235 (425)
T PRK06501 159 ADRFGTR--GLPISLST-ACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFS 235 (425)
T ss_pred HHHhCCC--CCceeecC-ccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCC
Confidence 9999996 57899995 9999999999999999999999999999994 22100 011
Q ss_pred CCccchhhhhhccccceEEEEecCCc
Q 039047 206 NDRSMILANCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 206 ~dr~~~~~~~lfgDGaaA~lLs~~~~ 231 (465)
.+|+ ..++||||+|+||++.+.
T Consensus 236 ~~r~----G~v~GEGaaalVLe~~~~ 257 (425)
T PRK06501 236 KDRD----GFVMAEGAGALVLESLES 257 (425)
T ss_pred CCCC----CeeeeccEEEEEECcHHH
Confidence 2333 578999999999998654
No 67
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.31 E-value=1.5e-10 Score=120.17 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCC-CChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAI-MPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~-~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
..+|+.+|++++|+++|+.+++||.+|++++ +... .+.++..++..+|++..++.++++. +|++|+.|+..|...++
T Consensus 27 ~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~~-aCaSG~~Al~~A~~~I~ 105 (391)
T PRK07661 27 PDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITINR-YCSSGLQSIAYGAERIM 105 (391)
T ss_pred HHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehhh-hhhHHHHHHHHHHHHHH
Confidence 4699999999999999988899999999753 3322 3677778999999985599999995 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+.+||+++|++|.
T Consensus 106 sG~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 106 LGHSEAVIAGGAESMSL 122 (391)
T ss_pred cCCCCEEEEEEEeeccc
Confidence 99999999999998764
No 68
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.30 E-value=4.5e-10 Score=117.40 Aligned_cols=186 Identities=8% Similarity=0.077 Sum_probs=117.8
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhc-cCCcchHHHHHHHHHHcCccceE--eecCccc--cCCCCCCChhhhh
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTK-NLGLNEYKFLLKAIVSSGIGEQT--YSPRIMF--AGREDNPTLQDGI 103 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~-~~~~~~~~f~~ki~~~sGI~~r~--~~~~~~~--~~~~~~~t~~~~~ 103 (465)
++|.|+++||..|-. .+.+++.+.+..-. .+.+- .+ +...+...+. .+++-.. ..+ +.-....
T Consensus 2 ~~v~ItG~g~~~p~g---~~~~~~w~~l~~g~~~~~~~-----~~-~~~~~~~~~~~g~i~~f~~~~~~~---~~~~~~~ 69 (411)
T PRK07314 2 RRVVVTGLGAVSPLG---NDVESTWKNLLAGKSGIGPI-----TH-FDTSDLAVKIAGEVKDFNPDDYMS---RKEARRM 69 (411)
T ss_pred CcEEEEcceEECCCc---CCHHHHHHHHHhCCCcEEEC-----Cc-ccccCCCccEEEEeCCcChhhcCC---HHHhhcC
Confidence 479999999999986 68888888775321 00000 00 0011111110 0110000 000 0111112
Q ss_pred hhHHHHHHHHHHHHHHHcCCCcCCcC----EEEEeecCC----------------------C----CCC-hHHHHHHHHc
Q 039047 104 DEMEEFFEDSIAKILDRSGISPKEID----ILVVNISMI----------------------A----IMP-SLSSRIINRY 152 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~agi~~~dId----~li~~~s~~----------------------~----~~P-s~a~~i~~~l 152 (465)
.....|+..|+++||+++|++++++| .++++++.. . ..+ ..+.++...+
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 149 (411)
T PRK07314 70 DRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRY 149 (411)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHh
Confidence 34568999999999999999999888 455554211 0 112 2567889999
Q ss_pred CCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCC-----C----------------CCCCCccch
Q 039047 153 KMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPN-----W----------------YSGNDRSMI 211 (465)
Q Consensus 153 gl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~-----~----------------~~~~dr~~~ 211 (465)
|++ -+.+.++. +|++++.||..|.++|++|..+.+||.++|..+.. + ..+-|+..
T Consensus 150 gl~--Gp~~tv~~-acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~- 225 (411)
T PRK07314 150 GAK--GPNHSIVT-ACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR- 225 (411)
T ss_pred CCC--Cccccchh-hhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC-
Confidence 996 47788885 99999999999999999999999999999974321 0 00111110
Q ss_pred hhhhhccccceEEEEecCCc
Q 039047 212 LANCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 212 ~~~~lfgDGaaA~lLs~~~~ 231 (465)
..+++||||+|+||++.+.
T Consensus 226 -dG~~~geGAaavvL~~~~~ 244 (411)
T PRK07314 226 -DGFVMGEGAGILVLEELEH 244 (411)
T ss_pred -CCEeEEceEEEEEEeeHHH
Confidence 2578999999999997643
No 69
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.29 E-value=2e-10 Score=119.47 Aligned_cols=91 Identities=20% Similarity=0.281 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCC---CChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHH
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAI---MPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~---~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~l 181 (465)
..+|+.+|++++|+++|++|+|||.+|++++ +... .+.....+...++ .++++++++ ++|++++.++..|.++
T Consensus 32 ~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~-~~CaSg~~ai~~A~~~ 108 (394)
T PRK06445 32 PEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVD-RQCASSLTTVSIGAME 108 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhh-hhhHHHHHHHHHHHHH
Confidence 5699999999999999999999999998753 3222 2233444555555 468999999 5999999999999999
Q ss_pred HhcCCCCEEEEEEecCCC
Q 039047 182 FKTYKNMNAMVVTSESLS 199 (465)
Q Consensus 182 l~~g~~~~aLVV~~E~~s 199 (465)
+++|..+++||+++|++|
T Consensus 109 I~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 109 IATGMADIVIAGGVEHMT 126 (394)
T ss_pred HHcCCCCEEEEeeecccc
Confidence 999999999999999766
No 70
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.27 E-value=2.9e-10 Score=116.67 Aligned_cols=244 Identities=16% Similarity=0.202 Sum_probs=157.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhc
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKT 184 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~ 184 (465)
.+.+|+..|++.+++ |++ ++||.||+++.... ....+..+...+|++..++.+.++. +|++++.|+..|.+.+++
T Consensus 24 ~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~~-~CaSG~~Ai~~a~~~I~s 98 (361)
T PRK06690 24 EVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTIDR-QCGAGLEAIRTACHFIQG 98 (361)
T ss_pred CHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehhh-hhhHHHHHHHHHHHHHHC
Confidence 357999999999865 896 89999999754221 2445556889999986799999995 999999999999999999
Q ss_pred CCCCEEEEEEecCCCCC-C----------CC---------------CCCcc-----------------------------
Q 039047 185 YKNMNAMVVTSESLSPN-W----------YS---------------GNDRS----------------------------- 209 (465)
Q Consensus 185 g~~~~aLVV~~E~~s~~-~----------~~---------------~~dr~----------------------------- 209 (465)
|..+.+||++.|.+|.. + +. +-.|+
T Consensus 99 G~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v 178 (361)
T PRK06690 99 GAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSF 178 (361)
T ss_pred CCCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceecc
Confidence 99999999999998742 1 00 00000
Q ss_pred ----------------------chh---------hhhhccccceEEEEecCCcccc---ccceeeeceEEeeeCCCCCCC
Q 039047 210 ----------------------MIL---------ANCLFRSGGAVILLSNKRSLER---NALFKLKCLVRTHHGARDDSY 255 (465)
Q Consensus 210 ----------------------~~~---------~~~lfgDGaaA~lLs~~~~~~~---~~~~~L~~~~~t~~~sd~~~~ 255 (465)
.++ ..|..+|||+|+||.+++..+. ++..++ +.....+.+
T Consensus 179 ~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i---~~~~~~~~~--- 252 (361)
T PRK06690 179 NGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRF---VRSAVVGVD--- 252 (361)
T ss_pred cCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEE---EEEEEeccC---
Confidence 000 0123368888888876543211 011111 111110000
Q ss_pred ccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEE
Q 039047 256 GCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHF 335 (465)
Q Consensus 256 ~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~ 335 (465)
.+.+. .+.....++++ +++|+. .+|||+|
T Consensus 253 ------------------~~~~~-------------------------~~~~~a~~~al-----~~Agl~---~~Did~~ 281 (361)
T PRK06690 253 ------------------PNLPG-------------------------TGPIFAVNKLL-----NEMNMK---VEDIDYF 281 (361)
T ss_pred ------------------cccch-------------------------hHHHHHHHHHH-----HHcCCC---HHHcCEe
Confidence 00000 00111233445 457787 4899999
Q ss_pred EecCCCHHHHHHHHhhCCCCcccchhH---HHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheeee
Q 039047 336 CIHTGGKAVIDGIGFSLDLTEYDLEPA---RMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCVW 412 (465)
Q Consensus 336 ~~H~~~~~ii~~i~~~Lgl~~e~~~~s---~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~ 412 (465)
.+|+..........+.||++++++.++ ....|.+|++|+..++-.+.++.++| .+.| +..+..|.|. -.+++|
T Consensus 282 ei~eafa~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~~-~~~g--~~~~c~~gG~-g~a~~~ 357 (361)
T PRK06690 282 EINEAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRED-MKYG--IATLGIGGGI-GLALLF 357 (361)
T ss_pred eecchhHHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHhC-CCEE--EEEEcccCcc-eeEEEE
Confidence 999999999999999999998877542 22368999999999999888886532 1222 3333444444 344555
Q ss_pred EE
Q 039047 413 EV 414 (465)
Q Consensus 413 ~~ 414 (465)
+.
T Consensus 358 e~ 359 (361)
T PRK06690 358 EK 359 (361)
T ss_pred Ee
Confidence 54
No 71
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.24 E-value=6.4e-10 Score=117.36 Aligned_cols=95 Identities=15% Similarity=0.182 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCCh-HHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIMPS-LSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~Ps-~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
...+|+.+|++++|+++|++++|||.||+++. .....+. .+..+...+|+++.+++++++. +|++|+.|+..|...|
T Consensus 70 s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~-~CaSG~~Ai~~Aa~~I 148 (452)
T PLN02287 70 YPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNR-QCSSGLQAVADVAAAI 148 (452)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEec-cCchHHHHHHHHHHHH
Confidence 46799999999999999999999999998653 3333343 4456667789985689999995 9999999999999999
Q ss_pred hcCCCCEEEEEEecCCCC
Q 039047 183 KTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 183 ~~g~~~~aLVV~~E~~s~ 200 (465)
++|..+.|||++.|.+|.
T Consensus 149 ~sG~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 149 KAGFYDIGIGAGVESMTT 166 (452)
T ss_pred HcCCCCeEEEEeEEecCC
Confidence 999999999999998753
No 72
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.23 E-value=9.3e-10 Score=115.57 Aligned_cols=188 Identities=12% Similarity=0.171 Sum_probs=115.3
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhc-cCCc-chHHHHHHHHHHcCccceE--eecCcccc----CCCCC---C
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTK-NLGL-NEYKFLLKAIVSSGIGEQT--YSPRIMFA----GREDN---P 97 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~-~~~~-~~~~f~~ki~~~sGI~~r~--~~~~~~~~----~~~~~---~ 97 (465)
++|.|+++|+..|.. .+.+++.+.+..-. .+.+ +..+ ..+...+. .++..... .+++. +
T Consensus 4 ~~V~ItG~g~~~p~g---~~~~~~w~~l~~G~s~i~~~~~~~-------~~~~~~~~~g~i~~~~~~~~~~fd~~~~i~~ 73 (424)
T PRK06333 4 KRIVVTGMGAVSPLG---CGVETFWQRLLAGQSGIRTLTDFP-------VGDLATKIGGQVPDLAEDAEAGFDPDRYLDP 73 (424)
T ss_pred CCEEEEcceEECCCC---CCHHHHHHHHHcCCCeEEeCCccc-------ccCCCCceEEEeccccccccccCChhHcCCH
Confidence 589999999999986 67888888775321 0100 0000 00111110 11110000 00000 0
Q ss_pred ChhhhhhhHHHHHHHHHHHHHHHcCCCcCCc-C----EEEEeecCC----------------------C----CCC-hHH
Q 039047 98 TLQDGIDEMEEFFEDSIAKILDRSGISPKEI-D----ILVVNISMI----------------------A----IMP-SLS 145 (465)
Q Consensus 98 t~~~~~~e~~~la~~Aa~~aL~~agi~~~dI-d----~li~~~s~~----------------------~----~~P-s~a 145 (465)
...........|+..|++++|+++|++++++ + .|++.++.. . ..+ ..+
T Consensus 74 ~~~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 153 (424)
T PRK06333 74 KDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAA 153 (424)
T ss_pred HHHhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHH
Confidence 1111223456789999999999999988776 3 344543211 0 011 246
Q ss_pred HHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCCC----------C------------
Q 039047 146 SRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNW----------Y------------ 203 (465)
Q Consensus 146 ~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~~----------~------------ 203 (465)
.+|...+|++ -+++.++. +|++++.||..|..+|++|..+.+||+++|.....+ +
T Consensus 154 ~~is~~~gl~--Gp~~~v~~-aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~ 230 (424)
T PRK06333 154 GHVSIRYGFK--GPLGAPVT-ACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQAS 230 (424)
T ss_pred HHHHHHhCCC--CCCccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCC
Confidence 6888999996 57888885 999999999999999999999999999999732100 0
Q ss_pred CCCCccchhhhhhccccceEEEEecCCc
Q 039047 204 SGNDRSMILANCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 204 ~~~dr~~~~~~~lfgDGaaA~lLs~~~~ 231 (465)
++-|+.. ...+.||||+++||++.+.
T Consensus 231 ~Pfd~~~--~G~~~gEGaa~lvLe~~~~ 256 (424)
T PRK06333 231 RPFDRDR--DGFVMGEGAGILVIETLEH 256 (424)
T ss_pred CCCCCCC--CCeEEecceEEEEEeeHHH
Confidence 0111110 1567899999999997543
No 73
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.21 E-value=8.7e-10 Score=114.76 Aligned_cols=93 Identities=13% Similarity=0.118 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCC-CCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhc
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISMI-AIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKT 184 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~-~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~ 184 (465)
..+|+.+|++++|+++|++++|||.||+++... ...+..+..+...+|++..++.+.++. +|++++.++..|.+.|++
T Consensus 25 ~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~~-~caSg~~av~~Aa~~I~s 103 (394)
T PLN02644 25 ATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVNK-VCASGMKAVMLAAQSIQL 103 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEec-cchHHHHHHHHHHHHHHc
Confidence 569999999999999999999999999865321 112345556889999976688999995 999999999999999999
Q ss_pred CCCCEEEEEEecCCC
Q 039047 185 YKNMNAMVVTSESLS 199 (465)
Q Consensus 185 g~~~~aLVV~~E~~s 199 (465)
|..+.+||++.|.+|
T Consensus 104 G~~d~vlv~G~E~~s 118 (394)
T PLN02644 104 GINDVVVAGGMESMS 118 (394)
T ss_pred CCCCEEEEEeEEecC
Confidence 999999999988775
No 74
>PRK06158 thiolase; Provisional
Probab=99.21 E-value=1.3e-09 Score=113.01 Aligned_cols=89 Identities=13% Similarity=0.052 Sum_probs=75.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhc
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKT 184 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~ 184 (465)
+..+|+.+|+++||+++|++++|||.+++++. ....|+ ..+++.+|++ ..+.+++.. ||+++..++..|..+|++
T Consensus 27 t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~-~~~~~~~~~-g~~s~~~al~~A~~~I~s 101 (384)
T PRK06158 27 SAMELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIR-PRFVDGTMI-GGSSFLAHLLPAALALEA 101 (384)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCC-CeeeccccC-ccHHHHHHHHHHHHHHHc
Confidence 34699999999999999999999999998653 233444 5799999997 578889884 999999999999999999
Q ss_pred CCCCEEEEE-EecCC
Q 039047 185 YKNMNAMVV-TSESL 198 (465)
Q Consensus 185 g~~~~aLVV-~~E~~ 198 (465)
|..++|||+ +.|..
T Consensus 102 G~~d~vLV~~g~~~~ 116 (384)
T PRK06158 102 GLCDVALICYGSNQR 116 (384)
T ss_pred CCCCEEEEeeccccc
Confidence 999999998 45433
No 75
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.18 E-value=2.2e-09 Score=112.39 Aligned_cols=122 Identities=12% Similarity=0.124 Sum_probs=87.0
Q ss_pred hHHHHHHHHHHHHHHHcCCC---cCCcCEEEEeec----------------CCCC--------CC-hHHHHHHHHcCCCC
Q 039047 105 EMEEFFEDSIAKILDRSGIS---PKEIDILVVNIS----------------MIAI--------MP-SLSSRIINRYKMRK 156 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~---~~dId~li~~~s----------------~~~~--------~P-s~a~~i~~~lgl~~ 156 (465)
....|+..|++++|+++|++ +++|++++-++. +... .| ..+.+|+..||++
T Consensus 79 ~~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~- 157 (410)
T PRK07103 79 LSAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR- 157 (410)
T ss_pred HHHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC-
Confidence 35679999999999999986 456665554321 0111 12 2567788999996
Q ss_pred CceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecC-CCCC----------------------CCCCCCccchhh
Q 039047 157 DIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSES-LSPN----------------------WYSGNDRSMILA 213 (465)
Q Consensus 157 ~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~-~s~~----------------------~~~~~dr~~~~~ 213 (465)
-+++.+++ +|++++.||..|.++|++|..+.+||+++|. .+.. ...+-|+. -.
T Consensus 158 -G~~~tv~~-acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~--~d 233 (410)
T PRK07103 158 -GEGFTVGG-ASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQD--RD 233 (410)
T ss_pred -CCcccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCC--CC
Confidence 37788996 9999999999999999999999999999864 1110 00011111 02
Q ss_pred hhhccccceEEEEecCCc
Q 039047 214 NCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 214 ~~lfgDGaaA~lLs~~~~ 231 (465)
..++||||+|+||++.+.
T Consensus 234 G~v~gEGaaalvLe~~~~ 251 (410)
T PRK07103 234 GFIYGEACGAVVLESAES 251 (410)
T ss_pred CeeEeeeEEEEEEccHHH
Confidence 578999999999997543
No 76
>PRK08256 lipid-transfer protein; Provisional
Probab=99.18 E-value=2e-09 Score=112.06 Aligned_cols=90 Identities=14% Similarity=0.193 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcC
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTY 185 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g 185 (465)
..+|+.+|+++||+++|++++|||.+++.+....... ...+...+|++ .++.++++. +|++++.+|..|.++|++|
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~--~~~~~~~lGl~-~~~~~~v~~-~caSg~~ai~~A~~~I~sG 97 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS--GQRALYEVGMT-GIPIVNVNN-NCSTGSTALFLARQAVRSG 97 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch--hHHHHHHcCCC-CCCCccccc-ccHHHHHHHHHHHHHHHCC
Confidence 4699999999999999999999999988643211111 23467789997 578899995 9999999999999999999
Q ss_pred CCCEEEEEEecCCC
Q 039047 186 KNMNAMVVTSESLS 199 (465)
Q Consensus 186 ~~~~aLVV~~E~~s 199 (465)
..+++||+++|..|
T Consensus 98 ~~d~vLv~g~e~~s 111 (391)
T PRK08256 98 AADCALALGFEQMQ 111 (391)
T ss_pred CCCEEEEEEEeecc
Confidence 99999999999875
No 77
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.18 E-value=2.4e-09 Score=111.20 Aligned_cols=94 Identities=12% Similarity=0.182 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecC-CCC-CChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISM-IAI-MPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~-~~~-~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
+.+|+.+|++++|+++|++|++||.+++++.. ... ....+..+...+|++.+++.+.++. +|++|+.|+..|.+.++
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~~-~CaSG~~A~~~A~~~I~ 104 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTIDC-QCGSAQQANHLVAGLIA 104 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEec-ccccHHHHHHHHHHHHH
Confidence 57999999999999999999999999997642 222 2345667778899986799999995 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+.+|+++.|++|.
T Consensus 105 sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 105 AGAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCCEEEEEeEecCCC
Confidence 99999999999999875
No 78
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.17 E-value=1.2e-09 Score=113.46 Aligned_cols=95 Identities=16% Similarity=0.175 Sum_probs=83.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
.+.+|+.+|++++|+++|++|++||.+|+++. ........+..++..+|++..++++.++. +|++|+.|+..|...++
T Consensus 26 ~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~~-~CaSG~~Ai~~A~~~I~ 104 (392)
T PRK06633 26 PAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTINK-VCGSGLKSVALAANSIM 104 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhcc-hhHHHHHHHHHHHHHHH
Confidence 46799999999999999999999999999653 22224466777889999986799999995 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+.+|+++.|++|.
T Consensus 105 sG~~dvvla~G~E~ms~ 121 (392)
T PRK06633 105 TGDNEIVIAGGQENMSL 121 (392)
T ss_pred cCCCCEEEEcccccCCC
Confidence 99999999999998874
No 79
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.16 E-value=3.4e-09 Score=110.04 Aligned_cols=95 Identities=12% Similarity=0.199 Sum_probs=79.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecC-CCC-CChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISM-IAI-MPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~-~~~-~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
.+.+|+.+|++.+|+++|++|++||.+|+++.. ... .+..+..+.-..|++.+++.+.++. +|++|+.|+..|.+.+
T Consensus 25 ~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~~-~CaSG~~Ai~~A~~~I 103 (390)
T PRK06504 25 HPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSIDR-QCGSSQQALHFAAQAV 103 (390)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEec-hhhHHHHHHHHHHHHH
Confidence 357999999999999999999999999997542 111 2445555455558876899999995 9999999999999999
Q ss_pred hcCCCCEEEEEEecCCCC
Q 039047 183 KTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 183 ~~g~~~~aLVV~~E~~s~ 200 (465)
++|..+.+||++.|++|.
T Consensus 104 ~sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 104 MSGTMDIVIAAGVESMTR 121 (390)
T ss_pred HCCCCCEEEEeeeeecCC
Confidence 999999999999999874
No 80
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.15 E-value=1.9e-08 Score=105.35 Aligned_cols=187 Identities=9% Similarity=0.108 Sum_probs=114.9
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhc-cCCcchHHHHHHHHHHcCccceE--eecCccccCCCC-CCChhhhhh
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTK-NLGLNEYKFLLKAIVSSGIGEQT--YSPRIMFAGRED-NPTLQDGID 104 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~-~~~~~~~~f~~ki~~~sGI~~r~--~~~~~~~~~~~~-~~t~~~~~~ 104 (465)
++|.|+++|+-.|-. .+.+++-+.+..-. .+.+ +++ ++..+...+. .+++ +..... .+.......
T Consensus 4 ~~VvItG~g~~~p~g---~~~~~~w~~L~~g~s~i~~-----~~~-~~~~~~~~~~~g~i~~--~~~~~~~~~~~~~~~d 72 (414)
T PRK08722 4 RRVVVTGMGMLSPVG---NTVESSWKALLAGQSGIVN-----IEH-FDTTNFSTRFAGLVKD--FNCEEYMSKKDARKMD 72 (414)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHhCCCeeee-----cCc-cccccCCCceeEEcCC--CChhHcCCHHHHhhcC
Confidence 689999999999986 68888887764311 0000 000 0011111110 0110 000000 000011112
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcC----EEEEeecC-C-----------------C--------CCC-hHHHHHHHHcC
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEID----ILVVNISM-I-----------------A--------IMP-SLSSRIINRYK 153 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId----~li~~~s~-~-----------------~--------~~P-s~a~~i~~~lg 153 (465)
....++..|+.+||+++|+++++.+ .|++.++. . . ..| .++.+|...+|
T Consensus 73 ~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~g 152 (414)
T PRK08722 73 LFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRG 152 (414)
T ss_pred HHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhC
Confidence 3456889999999999999764433 34444321 0 0 122 37788999999
Q ss_pred CCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCCC----------C-----------CCCCccchh
Q 039047 154 MRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNW----------Y-----------SGNDRSMIL 212 (465)
Q Consensus 154 l~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~~----------~-----------~~~dr~~~~ 212 (465)
++. +.+.++. +|++++.||..|.++|++|..+.+||+++|.....+ . .+-|+..
T Consensus 153 l~G--p~~ti~~-aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~-- 227 (414)
T PRK08722 153 LRG--PNIAIST-ACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDR-- 227 (414)
T ss_pred CCC--Ccccccc-ccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCC--
Confidence 974 8889995 999999999999999999999999999999853210 0 0111110
Q ss_pred hhhhccccceEEEEecCCc
Q 039047 213 ANCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 213 ~~~lfgDGaaA~lLs~~~~ 231 (465)
...+.|||++++||++...
T Consensus 228 ~G~~~gEGaaalvLe~~~~ 246 (414)
T PRK08722 228 DGFVLGDGAGMMVLEEYEH 246 (414)
T ss_pred CceEeeceEEEEEEccHHH
Confidence 2678899999999997654
No 81
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.13 E-value=4.5e-09 Score=109.79 Aligned_cols=190 Identities=10% Similarity=0.106 Sum_probs=114.5
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCC-CCChhhhhhhHH
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGRED-NPTLQDGIDEME 107 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~-~~t~~~~~~e~~ 107 (465)
++|.|.++|+-.|-. .+.+++.+.+..-. .-++.+.+.-...++..+....-..+..++. .+..........
T Consensus 2 ~~VvITG~g~vtp~G---~~~~~~~~~L~~g~----s~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~~~~~~ 74 (405)
T PRK09116 2 RRVVVTGMGGVTALG---EDWQTIAARLKAGR----NAVRRMPEWDRYDGLNTRLAAPIDDFELPAHYTRKKIRSMGRVS 74 (405)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHcCC----CCEEeCCchhhccCCCCceEEEecCcChhHhcCHHHHhhCCHHH
Confidence 479999999999986 78888888774321 0000000000001222221111000000000 000111112345
Q ss_pred HHHHHHHHHHHHHcCCCc------CCcCEEEEeecCC--------------------------CCCC-hHHHHHHHHcCC
Q 039047 108 EFFEDSIAKILDRSGISP------KEIDILVVNISMI--------------------------AIMP-SLSSRIINRYKM 154 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~------~dId~li~~~s~~--------------------------~~~P-s~a~~i~~~lgl 154 (465)
.|+..|+++||+++|+.. +.+ .|+++++.. ..+| ..+.+|...+|+
T Consensus 75 ~~al~aa~~Al~dAGl~~~~~~~~~r~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 153 (405)
T PRK09116 75 LMATRASELALEDAGLLGDPILTDGRM-GIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGL 153 (405)
T ss_pred HHHHHHHHHHHHHcCCCCccccCCCcE-EEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCC
Confidence 789999999999999842 223 344443210 0123 267889999999
Q ss_pred CCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCC----C----------------CCCCCccchhhh
Q 039047 155 RKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPN----W----------------YSGNDRSMILAN 214 (465)
Q Consensus 155 ~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~----~----------------~~~~dr~~~~~~ 214 (465)
+. +.+.++. +|++++.||..|.++|++|..+.+||.++|..++. | ..+-|+.. ..
T Consensus 154 ~G--p~~ti~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~--~G 228 (405)
T PRK09116 154 KG--RVIPTSS-ACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR--DG 228 (405)
T ss_pred CC--Ccccccc-hhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC--CC
Confidence 84 8889995 99999999999999999999999999999975430 0 00111110 26
Q ss_pred hhccccceEEEEecCCc
Q 039047 215 CLFRSGGAVILLSNKRS 231 (465)
Q Consensus 215 ~lfgDGaaA~lLs~~~~ 231 (465)
.+.|+||+++||++...
T Consensus 229 ~v~gEGa~~~vLe~~~~ 245 (405)
T PRK09116 229 LVIGEGAGTLVLEELEH 245 (405)
T ss_pred EeeeccEEEEEEccHHH
Confidence 78899999999997543
No 82
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.12 E-value=3.4e-08 Score=103.25 Aligned_cols=187 Identities=13% Similarity=0.146 Sum_probs=115.9
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeec-CccccCCCC---CCChhhhhh
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSP-RIMFAGRED---NPTLQDGID 104 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~-~~~~~~~~~---~~t~~~~~~ 104 (465)
++|.|.++|+-.|-. .+.+++.+.+..-. -...... + +...+...+.... ++ + ++. .+.......
T Consensus 2 ~~v~ItG~g~vsp~G---~~~~~~~~~L~~G~-s~i~~~~---~-~~~~~~~~~~~g~i~~-f--~~~~~~~~~~~~~~~ 70 (406)
T PRK08439 2 KRVVVTGIGMINSLG---LNKESSFKAICNGE-CGIKKIT---L-FDASDFPVQIAGEITD-F--DPTEVMDPKEVKKAD 70 (406)
T ss_pred CCEEEEeeEEECCCc---CCHHHHHHHHHcCC-CceEeCC---C-ccccCCCCceeEEcCC-c--ChhhcCCHHHHhhcC
Confidence 479999999999986 67888888774321 0000000 0 0011111110000 00 0 000 001111123
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCE----EEEeecCC--------------------------CCCC-hHHHHHHHHcC
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDI----LVVNISMI--------------------------AIMP-SLSSRIINRYK 153 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~----li~~~s~~--------------------------~~~P-s~a~~i~~~lg 153 (465)
....|+..|+++||+++|+++++++. +++.++.. ...+ ..+..|...+|
T Consensus 71 ~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 150 (406)
T PRK08439 71 RFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHG 150 (406)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhC
Confidence 45789999999999999999887763 33433210 0122 46788999999
Q ss_pred CCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCC-CCC----C----------------CCCCCccchh
Q 039047 154 MRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESL-SPN----W----------------YSGNDRSMIL 212 (465)
Q Consensus 154 l~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~-s~~----~----------------~~~~dr~~~~ 212 (465)
++. +.+.+.. +|++++.||..|.++|++|..+.+||+++|.. ++. | ..+-|+..
T Consensus 151 l~G--p~~~~~~-acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~-- 225 (406)
T PRK08439 151 LKG--PNLSSVT-ACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDR-- 225 (406)
T ss_pred CCC--Ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCC--
Confidence 984 6788884 99999999999999999999999999999963 210 0 01111110
Q ss_pred hhhhccccceEEEEecCCc
Q 039047 213 ANCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 213 ~~~lfgDGaaA~lLs~~~~ 231 (465)
...++|+||+++||++...
T Consensus 226 ~G~v~gEGa~~lvLe~~~~ 244 (406)
T PRK08439 226 DGFVMGEGAGALVLEEYES 244 (406)
T ss_pred CcEEeeCceEEEEEccHHH
Confidence 2578999999999997543
No 83
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.11 E-value=1.2e-08 Score=105.73 Aligned_cols=299 Identities=14% Similarity=0.154 Sum_probs=171.4
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecC-ccccCCCCCCChhhhhhhHH
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPR-IMFAGREDNPTLQDGIDEME 107 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~-~~~~~~~~~~t~~~~~~e~~ 107 (465)
++|.|.++|+..|-. . .+++.+.+.. + ++||+.-+-.+. ....... .........
T Consensus 2 ~rVvITG~G~vsp~G---~-~~~~~~~l~~-G---------------~sgi~~~~~~~~~~~~~~~~----~~~~~~~~~ 57 (381)
T PRK05952 2 MKVVVTGIGLVSALG---D-LEQSWQRLLQ-G---------------KSGIKLHQPFPELPPLPLGL----IGNQPSSLE 57 (381)
T ss_pred CeEEEEeeEEECccc---C-HHHHHHHHHc-C---------------CCCeEeCCccccccccccee----ecccccccc
Confidence 479999999999986 4 7777776632 1 244442111000 0000000 000001122
Q ss_pred HHHHHHHHHHHHHcCCCc--CCcCEEEEeecCC-----------------------------CCCC-hHHHHHHHHcCCC
Q 039047 108 EFFEDSIAKILDRSGISP--KEIDILVVNISMI-----------------------------AIMP-SLSSRIINRYKMR 155 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~--~dId~li~~~s~~-----------------------------~~~P-s~a~~i~~~lgl~ 155 (465)
.++..|+++||+++|+++ +++.++ +.++.. ..+| ..+..+...+|++
T Consensus 58 ~~~~~a~~~Al~dagl~~~~~~~Gv~-~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~ 136 (381)
T PRK05952 58 DLTKTVVTAALKDAGLTPPLTDCGVV-IGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ 136 (381)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCEEEE-EeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC
Confidence 356689999999999964 445444 433210 0122 2567888999998
Q ss_pred CCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecC-CCCC----C-----------CCC-CCccchhhhhhcc
Q 039047 156 KDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSES-LSPN----W-----------YSG-NDRSMILANCLFR 218 (465)
Q Consensus 156 ~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~-~s~~----~-----------~~~-~dr~~~~~~~lfg 218 (465)
. +.+.+.. +|++++.||..|.++|+.|..+.+||.++|. .++. | .+. .+|+ ..++|
T Consensus 137 G--p~~ti~~-aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~----G~v~g 209 (381)
T PRK05952 137 G--PVLAPMA-ACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQRE----GLVLG 209 (381)
T ss_pred C--ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCC----Ccccc
Confidence 4 7889995 9999999999999999999999999999996 4321 0 111 1222 67899
Q ss_pred ccceEEEEecCCccccccceeee-ceEEeeeCCCCCCCccceeccCCCCCCceecCCChhHHHHHHHhhhhhhcCCCcch
Q 039047 219 SGGAVILLSNKRSLERNALFKLK-CLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVISPMILP 297 (465)
Q Consensus 219 DGaaA~lLs~~~~~~~~~~~~L~-~~~~t~~~sd~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~~p~~l~ 297 (465)
|||+++||++.+..+.+ +-++. .+......+|+.. .. .++ |. ++
T Consensus 210 EGaa~lvLe~~~~A~~r-g~~i~a~I~g~~~~~d~~~---~~-------------~~~-~~--~~--------------- 254 (381)
T PRK05952 210 EGGAILVLESAELAQKR-GAKIYGQILGFGLTCDAYH---MS-------------APE-PD--GK--------------- 254 (381)
T ss_pred ccEEEEEEeeHHHHHhC-CCceEEEEEEEEecCCCCC---CC-------------CCC-CC--HH---------------
Confidence 99999999986543211 11111 1222222222211 00 000 00 00
Q ss_pred HHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHHHHH-----HHhhCCCCcccchhHHHHHhhhccc
Q 039047 298 IRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVIDG-----IGFSLDLTEYDLEPARMTLHRFGNT 372 (465)
Q Consensus 298 ~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~ii~~-----i~~~Lgl~~e~~~~s~~~l~~~GNt 372 (465)
... ...++.+ +++|+.| +|||++..|-.+....|. +.+.++ +++.- -.+=..+||+
T Consensus 255 ---~~~----~ai~~Al-----~~agi~p---~dId~i~~hgtgt~~~D~~E~~al~~~fg---~~~~v-~s~K~~~GH~ 315 (381)
T PRK05952 255 ---SAI----AAIQQCL-----ARSGLTP---EDIDYIHAHGTATRLNDQREANLIQALFP---HRVAV-SSTKGATGHT 315 (381)
T ss_pred ---HHH----HHHHHHH-----HHhCCCH---HHeeEEEccCCCCCCCcHHHHHHHHHHcC---CCCee-ecchhhhccC
Confidence 001 1222334 3467774 899999999766655443 344444 12210 1223578999
Q ss_pred cccHHHHHHHH---HHHcCCCCC---------------------CCEEEEEeeCchhhhheeeeE
Q 039047 373 SAASLWYVLAY---MEAKKRLKK---------------------GDRVLMISFGAGFKCNSCVWE 413 (465)
Q Consensus 373 ssasi~~~L~~---~~~~g~l~~---------------------Gd~vl~~sfGaG~~~~~~v~~ 413 (465)
.+|+=.+.+.. .++++.+.+ =++++..+||.|-.-.+++++
T Consensus 316 ~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 316 LGASGALGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred hHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 99987666654 344444322 256788899998887777764
No 84
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.09 E-value=3.7e-10 Score=117.92 Aligned_cols=95 Identities=19% Similarity=0.218 Sum_probs=85.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
...+|+.+|++++|+++|++++|||.||++++ +....|.++..++..+|++.++++++++. +|++|+.|+..|.++++
T Consensus 25 ~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~~-~CaSg~~Al~~A~~~I~ 103 (404)
T PRK06205 25 PAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLDR-RCGSGLQAVITAAMQVQ 103 (404)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehhh-hhhHHHHHHHHHHHHHH
Confidence 35799999999999999999999999999754 55556888888999999986689999995 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+.+||+++|.+|.
T Consensus 104 sG~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 104 TGAADVVIAGGAESMSN 120 (404)
T ss_pred cCCCCEEEEeeehhhcc
Confidence 99999999999999885
No 85
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.08 E-value=4.6e-10 Score=116.73 Aligned_cols=95 Identities=13% Similarity=0.155 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
...+|+.+|++++|+++|++|+|||.||+++. +....+..+..++..+|++.++++++++. +|++|+.|+..|.++++
T Consensus 25 ~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~~-~CaSg~~Al~~A~~~I~ 103 (393)
T PRK08235 25 KATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVNK-VCASGLRAVTLADQIIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehhh-hhhHHHHHHHHHHHHHH
Confidence 35799999999999999999999999999754 32124455667889999976799999995 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+.+||+++|.+|.
T Consensus 104 sG~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 104 AGDASVIVAGGMESMSN 120 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999886
No 86
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=99.06 E-value=8.3e-09 Score=107.03 Aligned_cols=94 Identities=11% Similarity=0.172 Sum_probs=75.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecC-CC-CCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISM-IA-IMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~-~~-~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
...+|+.+|++++|+++|++++|||.||+++.. .. ..+.++..+.-..|++..++.+.++. +|++++.++..|.+.|
T Consensus 25 ~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~~-acaSg~~Av~~Aa~~I 103 (382)
T PRK07801 25 HPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVDR-QCGSSQQAIHFAAQAV 103 (382)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeecc-hhhhHHHHHHHHHHHH
Confidence 356899999999999999999999999986531 11 12334444444577765588899994 9999999999999999
Q ss_pred hcCCCCEEEEEEecCCC
Q 039047 183 KTYKNMNAMVVTSESLS 199 (465)
Q Consensus 183 ~~g~~~~aLVV~~E~~s 199 (465)
++|..+.+||++.|.+|
T Consensus 104 ~sG~~d~vLv~G~e~ms 120 (382)
T PRK07801 104 MSGTQDLVVAGGVQNMS 120 (382)
T ss_pred HCCCCCEEEEcchhhhc
Confidence 99999999999999653
No 87
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.03 E-value=1.9e-08 Score=105.64 Aligned_cols=251 Identities=14% Similarity=0.100 Sum_probs=149.5
Q ss_pred hHHHHHHHHHHHHHHHcCCC-cCCcCE----EEEeecCCC--------------------------CCC-hHHHHHHHHc
Q 039047 105 EMEEFFEDSIAKILDRSGIS-PKEIDI----LVVNISMIA--------------------------IMP-SLSSRIINRY 152 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~-~~dId~----li~~~s~~~--------------------------~~P-s~a~~i~~~l 152 (465)
...+|+..|+++||+++|++ +++++. +++.++... ..+ ..+..|...+
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 45689999999999999998 666653 333322110 011 2567788889
Q ss_pred CCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCC-CC--------------C-------CCC--CCc
Q 039047 153 KMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLS-PN--------------W-------YSG--NDR 208 (465)
Q Consensus 153 gl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s-~~--------------~-------~~~--~dr 208 (465)
|++. +++.++. +|++++.||..|.++|++|..+.+||+++|... +. + ..+ .++
T Consensus 156 ~l~G--p~~ti~~-aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~ 232 (421)
T PTZ00050 156 KLKG--PSGSAVT-ACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR 232 (421)
T ss_pred CCCC--ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC
Confidence 9974 7888995 999999999999999999999999999999732 10 0 001 112
Q ss_pred cchhhhhhccccceEEEEecCCccccccceeeec-eEEeeeCCCCCCCccceeccCCCCCCceecCCChhHHHHHHHhhh
Q 039047 209 SMILANCLFRSGGAVILLSNKRSLERNALFKLKC-LVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDN 287 (465)
Q Consensus 209 ~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~-~~~t~~~sd~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~ 287 (465)
+ +.+.||||+|+||++.+....+ +-++.. +......+|+.+ +....|. +.
T Consensus 233 ~----G~~~gEGAaalvLe~~~~A~~~-g~~i~a~i~g~~~~~d~~~-----------------~~~p~~~--~~----- 283 (421)
T PTZ00050 233 A----GFVMGEGAGILVLEELEHALRR-GAKIYAEIRGYGSSSDAHH-----------------ITAPHPD--GR----- 283 (421)
T ss_pred C----CEeeccceEEEEEeeHHHHHHC-CCeEEEEEEEEEEcCCCCC-----------------CCCCCCC--hH-----
Confidence 2 5688999999999986543211 111111 222222222100 0000010 00
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCC-cCCCCCccCCccEEEecCCCHHHH-----HHHHhhCCCCc-ccch
Q 039047 288 LRVISPMILPIRELLRYALVTFVRKMSNNTPKGE-KKAGVNFRTGVDHFCIHTGGKAVI-----DGIGFSLDLTE-YDLE 360 (465)
Q Consensus 288 i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~-~g~~~~~~~did~~~~H~~~~~ii-----~~i~~~Lgl~~-e~~~ 360 (465)
-.. ..+++.+ ++ +|+.| +|||++.+|-.+...- +.+.+.++-.. +.+.
T Consensus 284 -------------~~~----~ai~~Al-----~~~Agi~~---~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~ 338 (421)
T PTZ00050 284 -------------GAR----RCMENAL-----KDGANINI---NDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLY 338 (421)
T ss_pred -------------HHH----HHHHHHH-----HhccCCCh---hhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCce
Confidence 001 1223344 45 67874 8999999997666333 34445554321 2221
Q ss_pred hHHHHHhhhccccccHHHHHHHHH---HHcCCCC--------------------------CCCEEEEEeeCchhhhheee
Q 039047 361 PARMTLHRFGNTSAASLWYVLAYM---EAKKRLK--------------------------KGDRVLMISFGAGFKCNSCV 411 (465)
Q Consensus 361 ~s~~~l~~~GNtssasi~~~L~~~---~~~g~l~--------------------------~Gd~vl~~sfGaG~~~~~~v 411 (465)
- -.+=..+||+.+|+=.+.|... ++++.+. +=.+++..+||.|-.-.+++
T Consensus 339 v-~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lv 417 (421)
T PTZ00050 339 V-SSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALL 417 (421)
T ss_pred E-ECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEE
Confidence 0 0122367998888876666532 4444321 11567888999998888888
Q ss_pred eE
Q 039047 412 WE 413 (465)
Q Consensus 412 ~~ 413 (465)
++
T Consensus 418 l~ 419 (421)
T PTZ00050 418 FT 419 (421)
T ss_pred Ee
Confidence 76
No 88
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.02 E-value=3.8e-08 Score=102.66 Aligned_cols=188 Identities=15% Similarity=0.118 Sum_probs=113.8
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhc-cCCcchHHHHHHHHHHcCccceEee-cCccccCCCCC-CChhhhhhh
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTK-NLGLNEYKFLLKAIVSSGIGEQTYS-PRIMFAGREDN-PTLQDGIDE 105 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~-~~~~~~~~f~~ki~~~sGI~~r~~~-~~~~~~~~~~~-~t~~~~~~e 105 (465)
++|.|+++|+-.|-. .+.+++.+.+..-. .+.+- .+ +...+...+.-. .++ +...... +........
T Consensus 1 ~~VvItG~G~vsp~G---~~~~~~w~~L~~G~s~i~~~-----~~-~~~~~~~~~~~g~i~~-~~~~~~~~~~~~~~~d~ 70 (399)
T cd00832 1 RRAVVTGIGVVAPNG---LGVEEYWKAVLDGRSGLGPI-----TR-FDPSGYPARLAGEVPD-FDAAEHLPGRLLPQTDR 70 (399)
T ss_pred CCEEEEeeEEeCCCC---CCHHHHHHHHHhCCCeEeeC-----Cc-cccccCCCceeEEeCC-cChhhcCCHHHHhhCCH
Confidence 469999999999986 67888888774321 01100 00 001111111000 000 0000000 011112234
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcC----EEEEeecCC------------------CC--------CC-hHHHHHHHHcCC
Q 039047 106 MEEFFEDSIAKILDRSGISPKEID----ILVVNISMI------------------AI--------MP-SLSSRIINRYKM 154 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId----~li~~~s~~------------------~~--------~P-s~a~~i~~~lgl 154 (465)
...++..|+++||+++|+++++++ .|++.++.. .. .+ ..+.+|...+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 467899999999999999876543 344443211 00 11 246788999999
Q ss_pred CCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCC-CC---------CC----------CCCCccchhhh
Q 039047 155 RKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLS-PN---------WY----------SGNDRSMILAN 214 (465)
Q Consensus 155 ~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s-~~---------~~----------~~~dr~~~~~~ 214 (465)
+. +++.++. +|++++.||..|.++|+.|. +.+||.++|... +. .. .+-|+.. ..
T Consensus 151 ~G--p~~ti~~-acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~--~G 224 (399)
T cd00832 151 RG--PSGVVVA-EQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA--AG 224 (399)
T ss_pred CC--Ccccccc-hhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC--CC
Confidence 74 7888885 99999999999999999999 999999998732 10 00 0111110 26
Q ss_pred hhccccceEEEEecCCcc
Q 039047 215 CLFRSGGAVILLSNKRSL 232 (465)
Q Consensus 215 ~lfgDGaaA~lLs~~~~~ 232 (465)
.+.|+||+++||++....
T Consensus 225 ~~~gEGa~~lvLe~~~~A 242 (399)
T cd00832 225 YVPGEGGAILVLEDAAAA 242 (399)
T ss_pred EeeeceEEEEEEeeHHHH
Confidence 789999999999986543
No 89
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.01 E-value=1.5e-09 Score=112.65 Aligned_cols=93 Identities=15% Similarity=0.185 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecC-CCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhc
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISM-IAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKT 184 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~-~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~ 184 (465)
..+|+.+|++++|+++|++++|||.||++++. ....+..+..++..+|++ +.+.++++ ++|++++.||.+|..+|++
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~-~~casg~~al~~A~~~I~s 98 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVE-AMCATGLAASLTAYTAVAS 98 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEe-ccCHHHHHHHHHHHHHHHC
Confidence 46899999999999999999999999987542 211233468899999998 46779999 5999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 039047 185 YKNMNAMVVTSESLSP 200 (465)
Q Consensus 185 g~~~~aLVV~~E~~s~ 200 (465)
|..+++|||++|..|.
T Consensus 99 G~~~~vLvvg~e~~s~ 114 (385)
T PRK12578 99 GLVDMAIAVGVDKMTE 114 (385)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998653
No 90
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=99.01 E-value=8.3e-08 Score=103.35 Aligned_cols=189 Identities=12% Similarity=0.102 Sum_probs=113.6
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEeecCccccCCCC--CCChhhhhhhH
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGRED--NPTLQDGIDEM 106 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~--~~t~~~~~~e~ 106 (465)
++|.|.++|+..|-. .+.+++.+.+.. +. ..+..++++ ....+..+. ...-....++. .+.........
T Consensus 129 ~rVvITG~G~vtp~G---~~~~~~w~~L~~-G~---s~i~~~~~f-~~~~~~~~~-ag~i~~f~~~~~l~~k~~r~md~~ 199 (540)
T PLN02787 129 RRVVVTGMGVVSPLG---HDPDVFYNNLLE-GV---SGISEIERF-DCSQFPTRI-AGEIKSFSTDGWVAPKLSKRMDKF 199 (540)
T ss_pred CCEEEEeeEEECCCC---CCHHHHHHHHHc-CC---CcccccCcc-chhhCCccc-cccccccChhhcCCHHHHHhCCHH
Confidence 589999999999986 688888877643 11 000000000 001111110 00000000000 01111122334
Q ss_pred HHHHHHHHHHHHHHcCCCcCC---cC----EEEEeecCC-------------------C------CCC-hHHHHHHHHcC
Q 039047 107 EEFFEDSIAKILDRSGISPKE---ID----ILVVNISMI-------------------A------IMP-SLSSRIINRYK 153 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~d---Id----~li~~~s~~-------------------~------~~P-s~a~~i~~~lg 153 (465)
..++..|++++|+++|++++. ++ .|++.++.. . ..+ ..+.+|...+|
T Consensus 200 ~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~g 279 (540)
T PLN02787 200 MLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLG 279 (540)
T ss_pred HHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhC
Confidence 578899999999999997642 21 345544211 0 011 24578889999
Q ss_pred CCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCC-CCC----C----------------CCCCCccchh
Q 039047 154 MRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESL-SPN----W----------------YSGNDRSMIL 212 (465)
Q Consensus 154 l~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~-s~~----~----------------~~~~dr~~~~ 212 (465)
++ -+.+.++. +|++++.||..|.++|++|..+.+||.++|.. ++. | ..+-|+..
T Consensus 280 l~--Gp~~tist-ACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~r-- 354 (540)
T PLN02787 280 WM--GPNYSIST-ACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNR-- 354 (540)
T ss_pred CC--CCcccccc-ccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCC--
Confidence 97 47889995 99999999999999999999999999999963 210 0 01111110
Q ss_pred hhhhccccceEEEEecCCc
Q 039047 213 ANCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 213 ~~~lfgDGaaA~lLs~~~~ 231 (465)
...++|+||+++||++.+.
T Consensus 355 dGfv~GEGAa~lVLE~~e~ 373 (540)
T PLN02787 355 DGFVMGEGAGVLLLEELEH 373 (540)
T ss_pred CCcccccceEEEEEeeHHH
Confidence 2678999999999997543
No 91
>PRK06059 lipid-transfer protein; Provisional
Probab=99.00 E-value=1.4e-09 Score=113.44 Aligned_cols=93 Identities=11% Similarity=0.045 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-C-CCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNIS-M-IAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~-~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
..+|+.+|+++||+++|++++|||.||++++ + ....+..+..++..+|++ .++.+++++ +|++++.+|..|.++|+
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~~-~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSYA-ACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceecccc-hhHHHHHHHHHHHHHHH
Confidence 4699999999999999999999999998653 2 233345678999999997 588999995 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+++||+++|..|.
T Consensus 101 sG~~~~vLvvg~e~~s~ 117 (399)
T PRK06059 101 AGLCDVALVVGADTTPK 117 (399)
T ss_pred CCCCCEEEEEEEcccCC
Confidence 99999999999998763
No 92
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.99 E-value=2.1e-09 Score=113.04 Aligned_cols=95 Identities=9% Similarity=0.190 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
...+|+.+|++++|+++|++++|||.||+++. +....++.+..++..+|++.+++.++++. +|++++.++..|.++|+
T Consensus 26 ~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~-~CaSg~~al~~A~~~I~ 104 (426)
T PRK08170 26 SASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQR-NCASGMQALDSAAANIA 104 (426)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeeccc-hhhHHHHHHHHHHHHHH
Confidence 35799999999999999999999999998653 32334677788999999975689999995 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+++||+++|.+|.
T Consensus 105 sG~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 105 LGRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCCEEEEEEEecccC
Confidence 99999999999998775
No 93
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.98 E-value=1.1e-07 Score=100.31 Aligned_cols=122 Identities=11% Similarity=0.053 Sum_probs=88.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCcC-----CcCEEEEeecCCC--------------------------CCC-hHHHHHHHHc
Q 039047 105 EMEEFFEDSIAKILDRSGISPK-----EIDILVVNISMIA--------------------------IMP-SLSSRIINRY 152 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~-----dId~li~~~s~~~--------------------------~~P-s~a~~i~~~l 152 (465)
....++..|+.+||+++|+++. +.+.++++++... ..+ ..+.+|...+
T Consensus 92 ~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~ 171 (437)
T PLN02836 92 RFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRY 171 (437)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHh
Confidence 3457999999999999998642 3556666543110 012 2567889999
Q ss_pred CCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCC----------------------CCCCCCccc
Q 039047 153 KMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPN----------------------WYSGNDRSM 210 (465)
Q Consensus 153 gl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~----------------------~~~~~dr~~ 210 (465)
|++ -+.+.+++ +|++++.||..|.++|++|..+.+||.++|..... ...+-|+..
T Consensus 172 gl~--Gp~~tv~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~ 248 (437)
T PLN02836 172 GFQ--GPNHAAVT-ACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR 248 (437)
T ss_pred CCC--CceeceeC-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC
Confidence 987 48889995 99999999999999999999999999999863210 000111110
Q ss_pred hhhhhhccccceEEEEecCCc
Q 039047 211 ILANCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 211 ~~~~~lfgDGaaA~lLs~~~~ 231 (465)
..++.||||+|+||++.+.
T Consensus 249 --~G~~~gEGaaalVLe~~~~ 267 (437)
T PLN02836 249 --DGFVIGEGAGVLVLEELEH 267 (437)
T ss_pred --CCeeeecCEEEEEEeeHHH
Confidence 2678899999999997654
No 94
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.98 E-value=2.7e-09 Score=105.19 Aligned_cols=95 Identities=16% Similarity=0.264 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
...+|+..|++.+|++++++|++||.|++++. +....+..+..+.-..|++..++.+.++. .|++|+.|+..|...|+
T Consensus 25 ~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~~-~CaSG~~Av~~a~~~I~ 103 (264)
T PF00108_consen 25 SPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVNR-ACASGLQAVHLAAMAIA 103 (264)
T ss_dssp -HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeehh-hhhHHHHHHHHhhhhhc
Confidence 46799999999999999999999999999764 43447778888888999988899999995 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+.+|+++.|++|.
T Consensus 104 sG~~dvvlagGvE~mS~ 120 (264)
T PF00108_consen 104 SGEADVVLAGGVESMSR 120 (264)
T ss_dssp TTS-SEEEEEEEEETTT
T ss_pred CCCccEEEEeccccccc
Confidence 99999999999999987
No 95
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.97 E-value=9.9e-08 Score=99.37 Aligned_cols=206 Identities=14% Similarity=0.049 Sum_probs=125.9
Q ss_pred ChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCC--------------CCCC--
Q 039047 142 PSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPN--------------WYSG-- 205 (465)
Q Consensus 142 Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~--------------~~~~-- 205 (465)
+..+..|+..||++. +.+.++. +|++++.||..|.++|++|..+.+||+++|..+.. +..+
T Consensus 137 ~~~a~~ia~~lgl~G--p~~~i~~-acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLSG--PAYTIST-ACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCCC--CcccccC-hhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 357889999999973 7889995 99999999999999999999999999999965431 0011
Q ss_pred CCccchhhhhhccccceEEEEecCCccccccceeeeceEEeeeCCCCCCCccceeccCCCCCCceecCCChhHHHHHHHh
Q 039047 206 NDRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFV 285 (465)
Q Consensus 206 ~dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~~t~~~sd~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~ 285 (465)
.+++ ..++|||++++||++.+.. ..++.+ .-..+|... .. ..+ |. +..
T Consensus 214 ~~~~----G~~~gEGaa~vVLe~~~~~----~~~I~g---~g~~~d~~~---~~-------------~~~-~~--~~~-- 261 (392)
T PRK09185 214 ANRD----GINIGEAAAFFLLEREDDA----AVALLG---VGESSDAHH---MS-------------APH-PE--GLG-- 261 (392)
T ss_pred CCCC----ccceeceEEEEEEEEcCCC----cEEEEE---EEEeCCCCC---CC-------------CCC-CC--HHH--
Confidence 1122 5789999999999987321 223322 222222110 00 000 11 000
Q ss_pred hhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHHH-----HHHHhhCCCCcccch
Q 039047 286 DNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVI-----DGIGFSLDLTEYDLE 360 (465)
Q Consensus 286 ~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~ii-----~~i~~~Lgl~~e~~~ 360 (465)
.. ...++.+ +++|+. .+|||++..|-.+...- ..+.+.++-.. .+.
T Consensus 262 ----------------~~----~a~~~Al-----~~Agl~---~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~-pv~ 312 (392)
T PRK09185 262 ----------------AI----LAMQQAL-----ADAGLA---PADIGYINLHGTATPLNDAMESRAVAAVFGDGV-PCS 312 (392)
T ss_pred ----------------HH----HHHHHHH-----HHcCCC---HHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCC-cee
Confidence 00 1223344 346777 48999999996665433 23444454211 121
Q ss_pred hHHHHHhhhccccccHHHHHHHHH---HHcCCCC------------------------CCCEEEEEeeCchhhhheeeeE
Q 039047 361 PARMTLHRFGNTSAASLWYVLAYM---EAKKRLK------------------------KGDRVLMISFGAGFKCNSCVWE 413 (465)
Q Consensus 361 ~s~~~l~~~GNtssasi~~~L~~~---~~~g~l~------------------------~Gd~vl~~sfGaG~~~~~~v~~ 413 (465)
.+=..+||+.+|+=.+.|... +++|.+. +-++++.-+||.|-.-.+++++
T Consensus 313 ---s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgG~n~~lvl~ 389 (392)
T PRK09185 313 ---STKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQALAIRYVLSNSFAFGGNNCSLIFG 389 (392)
T ss_pred ---CCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCCCccCCCCEEEEeCccCCceeEEEEEE
Confidence 112357999988866666432 3333211 1357788899999888888876
Q ss_pred E
Q 039047 414 V 414 (465)
Q Consensus 414 ~ 414 (465)
.
T Consensus 390 ~ 390 (392)
T PRK09185 390 R 390 (392)
T ss_pred e
Confidence 3
No 96
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.97 E-value=2.7e-07 Score=96.12 Aligned_cols=188 Identities=14% Similarity=0.115 Sum_probs=115.5
Q ss_pred cCCCceEEEeeeeecCCCCCccCHHHHHHHHHhhccCCc-chHHHHHHHHHHcCc-cceEeecCccccCCCCCCChhhhh
Q 039047 26 KRDKECYILDYQCYKPTDDRMVSTDFAGQVIKRTKNLGL-NEYKFLLKAIVSSGI-GEQTYSPRIMFAGREDNPTLQDGI 103 (465)
Q Consensus 26 ~r~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~~~~-~~~~f~~ki~~~sGI-~~r~~~~~~~~~~~~~~~t~~~~~ 103 (465)
...++|.|.++|+-.|-. .+.+++-+.+..-..-+. +..++-. ..+++ ++-.+ +... +. .......
T Consensus 3 ~~~~rVvITGiG~vsp~G---~~~e~~w~aL~~G~sg~~~~~~~~~~---~~~~~~~~~~~--~~~~--~~--~~~~r~~ 70 (398)
T PRK06519 3 MQPNDVVITGIGLVSSLG---EGLDAHWNALSAGRPQPNVDTETFAP---YPVHPLPEIDW--SQQI--PK--RGDQRQM 70 (398)
T ss_pred CCCCCEEEEcceEECCCC---CCHHHHHHHHHcCCCCCCCCcccccC---cCcccccccCh--hhcC--Cc--hhhhhcc
Confidence 346789999999999986 788998888753211000 0000000 00000 00000 0000 00 0001112
Q ss_pred hhHHHHHHHHHHHHHHHcCCCcC-----CcCEEEEeecCCC-------------------------------------CC
Q 039047 104 DEMEEFFEDSIAKILDRSGISPK-----EIDILVVNISMIA-------------------------------------IM 141 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~agi~~~-----dId~li~~~s~~~-------------------------------------~~ 141 (465)
+....++..|+++||+++|+++. ++++++-++.... ..
T Consensus 71 ~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 150 (398)
T PRK06519 71 ETWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQL 150 (398)
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhh
Confidence 23567899999999999999543 3433443321110 11
Q ss_pred C-hHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCC-CC---------CCC------C
Q 039047 142 P-SLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESL-SP---------NWY------S 204 (465)
Q Consensus 142 P-s~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~-s~---------~~~------~ 204 (465)
| ..+..|...+|++. +.+.+++ +|++++.||..|.++|++|..+.+||.++|.. +. .+. +
T Consensus 151 ~n~~a~~is~~~gl~G--p~~ti~~-acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p 227 (398)
T PRK06519 151 SNLLAGNISIVHKVTG--SSRTFMG-EESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAP 227 (398)
T ss_pred hhHHHHHHHHHhCCCC--ccccccC-CccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCc
Confidence 2 25678889999974 8889995 99999999999999999999999999999862 22 011 1
Q ss_pred CC-----CccchhhhhhccccceEEEEecCCcc
Q 039047 205 GN-----DRSMILANCLFRSGGAVILLSNKRSL 232 (465)
Q Consensus 205 ~~-----dr~~~~~~~lfgDGaaA~lLs~~~~~ 232 (465)
.. +|+ ..+.|+||+++||++.+..
T Consensus 228 ~~d~~~~~r~----G~v~GEGAa~lvLE~~~~A 256 (398)
T PRK06519 228 VWSRGGEDGG----GFILGSGGAFLVLESREHA 256 (398)
T ss_pred hhccCccCCC----CeeeeceEEEEEEeeHHHH
Confidence 01 133 6788999999999986543
No 97
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=98.93 E-value=4.3e-09 Score=109.33 Aligned_cols=91 Identities=15% Similarity=0.111 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCC--CChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISMIAI--MPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~--~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
..+|+.+|++++|+++|++++|||.+|++++++.. .+..+..+++.+|+. ..+.+++.+ ||+++..++..|..+++
T Consensus 29 ~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~~-~gasG~~al~~A~~~I~ 106 (392)
T PRK06065 29 PQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVYV-GGATGVMTAIAGWYHVA 106 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEec-CchhHHHHHHHHHHHHh
Confidence 46899999999999999999999999987543322 466788899999997 478999995 99999999999999999
Q ss_pred cCCCCEEEEEEecCC
Q 039047 184 TYKNMNAMVVTSESL 198 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~ 198 (465)
+|..++||||++|+.
T Consensus 107 sG~ad~vLVvg~e~~ 121 (392)
T PRK06065 107 SGLCQKVLAVAEEKM 121 (392)
T ss_pred CCCCCEEEEEEeecc
Confidence 999999999999984
No 98
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.93 E-value=3e-07 Score=96.58 Aligned_cols=318 Identities=9% Similarity=0.035 Sum_probs=176.0
Q ss_pred CCceEEEeeeeecCCCCCccCHHHHHHHHHhhc-cCCcchHHHHHHHHHHcCccceE--eecCccccCCCC-CCChhhhh
Q 039047 28 DKECYILDYQCYKPTDDRMVSTDFAGQVIKRTK-NLGLNEYKFLLKAIVSSGIGEQT--YSPRIMFAGRED-NPTLQDGI 103 (465)
Q Consensus 28 ~~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~-~~~~~~~~f~~ki~~~sGI~~r~--~~~~~~~~~~~~-~~t~~~~~ 103 (465)
.++|.|.++|+-.|-. .+.+++-+.+..-. .+.+-.. ......++..+. +++... ++. .+......
T Consensus 11 ~~~VvItGig~~sp~g---~~~~~~w~~L~~G~s~i~~~~~----~~~~~~~~~~~~~g~i~~~~---d~~~~~~~~~~~ 80 (418)
T PRK07910 11 FPNVVVTGIAMTTALA---TDAETTWKLLLDGQSGIRTLDD----PFVEEFDLPVRIGGHLLEEF---DHQLTRVELRRM 80 (418)
T ss_pred CCCEEEEeeEEECCCC---CCHHHHHHHHHcCCCeeEeCCh----hhhhccCCCcceEEEeccCc---cccCCHHHHhhc
Confidence 4689999999999986 78899888875321 1111000 001111222211 111110 000 00111111
Q ss_pred hhHHHHHHHHHHHHHHHcCC---CcCCcCEEEEeecCCC-------------------------CCC-hHHHHHHHHcCC
Q 039047 104 DEMEEFFEDSIAKILDRSGI---SPKEIDILVVNISMIA-------------------------IMP-SLSSRIINRYKM 154 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~agi---~~~dId~li~~~s~~~-------------------------~~P-s~a~~i~~~lgl 154 (465)
.....++..|+++||+++|+ +++.+.+++-++.... ..| ..+..+...+|+
T Consensus 81 d~~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 160 (418)
T PRK07910 81 SYLQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA 160 (418)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC
Confidence 23456889999999999996 4455554432221110 112 255677888888
Q ss_pred CCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCC-CCC----C------CC-----------CCCccchh
Q 039047 155 RKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESL-SPN----W------YS-----------GNDRSMIL 212 (465)
Q Consensus 155 ~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~-s~~----~------~~-----------~~dr~~~~ 212 (465)
+. +.+.++. +|++++.||..|.++|++|..+.+||.++|.. ++. | .. +-|+..
T Consensus 161 ~G--~~~ti~t-aCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~-- 235 (418)
T PRK07910 161 KA--GVITPVS-ACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDR-- 235 (418)
T ss_pred CC--Ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCC--
Confidence 74 6778885 99999999999999999999999999999974 210 0 00 111110
Q ss_pred hhhhccccceEEEEecCCccccccceeee-ceEEeeeCCCCCCCccceeccCCCCCCceecCCChhHHHHHHHhhhhhhc
Q 039047 213 ANCLFRSGGAVILLSNKRSLERNALFKLK-CLVRTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFVDNLRVI 291 (465)
Q Consensus 213 ~~~lfgDGaaA~lLs~~~~~~~~~~~~L~-~~~~t~~~sd~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~~~i~~~ 291 (465)
...++|+|++++||++....+.+ +.++. .+......+|+.+ .. ..+ |. +.
T Consensus 236 ~G~v~gEGaa~vvLe~~~~A~~r-g~~i~a~i~g~~~~~dg~~---~~-------------~~~-~~--~~--------- 286 (418)
T PRK07910 236 DGFVFGEGGALMVIETEEHAKAR-GANILARIMGASITSDGFH---MV-------------APD-PN--GE--------- 286 (418)
T ss_pred CCEeeeceEEEEEEeeHHHHHhC-CCcEEEEEEEEEEecCCCC---CC-------------CCC-CC--HH---------
Confidence 26789999999999976543211 11111 1222333333211 00 000 10 00
Q ss_pred CCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHH-----HHHHHhhCCCCcccchhHHHHH
Q 039047 292 SPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAV-----IDGIGFSLDLTEYDLEPARMTL 366 (465)
Q Consensus 292 ~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~i-----i~~i~~~Lgl~~e~~~~s~~~l 366 (465)
.+ ....++.+ +++|+. .+|||++..|-.+... .+.+.+.+|-..-.+ ..+=
T Consensus 287 --------~~-----~~a~~~Al-----~~agi~---~~did~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v---~s~K 342 (418)
T PRK07910 287 --------RA-----GHAMTRAI-----ELAGLT---PGDIDHVNAHATGTSVGDVAEGKAINNALGGHRPAV---YAPK 342 (418)
T ss_pred --------HH-----HHHHHHHH-----HHhCCC---HHHCCEEEcCCcCCCCCCHHHHHHHHHHhCCCCCce---eCcc
Confidence 00 01223344 346677 4899999999666543 344566666321112 1223
Q ss_pred hhhccccccHHHHHHHH---HHHcCCCC----------------------C--CCEEEEEeeCchhhhheeeeE
Q 039047 367 HRFGNTSAASLWYVLAY---MEAKKRLK----------------------K--GDRVLMISFGAGFKCNSCVWE 413 (465)
Q Consensus 367 ~~~GNtssasi~~~L~~---~~~~g~l~----------------------~--Gd~vl~~sfGaG~~~~~~v~~ 413 (465)
..+||+.+++=.+.|.. ++++|.+. + -.+++.-+||.|-+-.+++++
T Consensus 343 ~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~~~~~~~~~~~~~al~nsfGfGG~N~slvl~ 416 (418)
T PRK07910 343 SALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDVVAGEPRPGNYRYAINNSFGFGGHNVALAFG 416 (418)
T ss_pred ccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCCCcCCCccEEEEeeecCCCeeEEEEEe
Confidence 56799988876655432 33343321 1 245677789988877777775
No 99
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.92 E-value=5.1e-09 Score=109.00 Aligned_cols=94 Identities=9% Similarity=0.093 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCChHHH-HHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIMPSLSS-RIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~Ps~a~-~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
.+.+|+..|++++|+++|++|++||.||++++ ++...+..+. .+++.+|+. ++++++++. +|++++.++..|..+|
T Consensus 22 ~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~~-~Casg~~al~~A~~~I 99 (393)
T cd00826 22 LAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMNN-LCGSGLRALALAMQLI 99 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEecc-hhHHHHHHHHHHHHHH
Confidence 45799999999999999999999999998754 4433355555 367778886 689999995 9999999999999999
Q ss_pred hcCCCCEEEEEEecCCCC
Q 039047 183 KTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 183 ~~g~~~~aLVV~~E~~s~ 200 (465)
++|..+.+||+++|.+|.
T Consensus 100 ~sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 100 AGGDANCILAGGFEKMET 117 (393)
T ss_pred HCCCCCEEEEEeeecccc
Confidence 999999999999999875
No 100
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.90 E-value=2.2e-07 Score=99.41 Aligned_cols=92 Identities=12% Similarity=0.058 Sum_probs=75.1
Q ss_pred hHHHHHHHHHHHHHHHcCCC--cCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGIS--PKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~--~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
+..+|+.+|+++||+++|++ ++|||.+++..............++.++|+.+ ....... .||+++..++..|...|
T Consensus 26 s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~-~GG~s~~~~v~~Aa~~I 103 (498)
T PRK08257 26 EPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSP-VGGNSPQRLVNEAALRI 103 (498)
T ss_pred CHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEec-CCCHHHHHHHHHHHHHH
Confidence 35699999999999999999 99999998753211122234578999999974 4555555 59999999999999999
Q ss_pred hcCCCCEEEEEEecCC
Q 039047 183 KTYKNMNAMVVTSESL 198 (465)
Q Consensus 183 ~~g~~~~aLVV~~E~~ 198 (465)
++|..+.|||+++|..
T Consensus 104 asG~advVLv~G~E~~ 119 (498)
T PRK08257 104 AAGEADVALVAGAEAQ 119 (498)
T ss_pred HCCCCCEEEEeeeeec
Confidence 9999999999999975
No 101
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.89 E-value=1.8e-07 Score=97.80 Aligned_cols=188 Identities=10% Similarity=0.144 Sum_probs=115.3
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhc-cCCcchHHHHHHHHHHcCccceEeecCccccCCCCC-CChhhhhhhH
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTK-NLGLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDN-PTLQDGIDEM 106 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~-~~~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~-~t~~~~~~e~ 106 (465)
++|.|.++|+..|-. .+.+++.+.+..-. .+.+ ..+ +...+...+...... ....+.. ..........
T Consensus 2 ~rVvITG~G~vsp~G---~~~~~~w~~l~~G~sgi~~-----~~~-~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~r~ 71 (406)
T PRK07967 2 RRVVITGLGIVSSIG---NNQQEVLASLREGRSGITF-----SPE-FAEMGMRSQVWGNVK-LDPTGLIDRKVMRFMGDA 71 (406)
T ss_pred CcEEEEcceEECCCC---CCHHHHHHHHHcCCCceeE-----CCc-ccccCCCCceEEEcC-CChhhcCCHHHhhcCCHH
Confidence 589999999999986 78888888774211 0110 000 112232222211110 0000000 0111112234
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcC----EEEEeec-CC--------------------------CCCC-hHHHHHHHHcCC
Q 039047 107 EEFFEDSIAKILDRSGISPKEID----ILVVNIS-MI--------------------------AIMP-SLSSRIINRYKM 154 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId----~li~~~s-~~--------------------------~~~P-s~a~~i~~~lgl 154 (465)
..++..|++++|+++|+++++.+ .|++.++ .. ...+ ..+..|...+|+
T Consensus 72 ~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l 151 (406)
T PRK07967 72 SAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKI 151 (406)
T ss_pred HHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCC
Confidence 57889999999999999764432 2333321 00 0112 367889999999
Q ss_pred CCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCC---------------------CCCCccchhh
Q 039047 155 RKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWY---------------------SGNDRSMILA 213 (465)
Q Consensus 155 ~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~~~---------------------~~~dr~~~~~ 213 (465)
+. +.+.++. +|++++.||..|.++|+.|..+.+||.++|..+..+. .+-|+.. .
T Consensus 152 ~G--p~~tvs~-aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r--~ 226 (406)
T PRK07967 152 KG--VNYSISS-ACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANR--D 226 (406)
T ss_pred CC--Ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCC--C
Confidence 74 7888995 9999999999999999999999999999987543100 0111110 2
Q ss_pred hhhccccceEEEEecCCc
Q 039047 214 NCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 214 ~~lfgDGaaA~lLs~~~~ 231 (465)
..+.|+||+++||++.+.
T Consensus 227 G~v~gEGaa~lvLe~~~~ 244 (406)
T PRK07967 227 GFVIAGGGGVVVVEELEH 244 (406)
T ss_pred ceeeeceEEEEEEeeHHH
Confidence 578899999999997543
No 102
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.84 E-value=1.2e-08 Score=107.28 Aligned_cols=95 Identities=18% Similarity=0.218 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCC-CCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMI-AIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~-~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
...+|+.+|++++|+++|++|++||.+|++++.. ...+.++..+...+|++..++.+.++ .+|++++.|+..|...|+
T Consensus 28 ~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~~I~ 106 (428)
T PRK08963 28 PAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAESIM 106 (428)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHHHHH
Confidence 3569999999999999999999999999976422 22356777789999998669999999 599999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+.+||++.|++|.
T Consensus 107 sG~~dvvLvgG~Esms~ 123 (428)
T PRK08963 107 AGTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCCEEEEecccccCC
Confidence 99999999999999885
No 103
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.83 E-value=1.9e-08 Score=104.84 Aligned_cols=95 Identities=9% Similarity=0.085 Sum_probs=84.7
Q ss_pred hHHHHHHHHHHHHHHH-cCCCcCCcCEEEEeecC--CCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDR-SGISPKEIDILVVNISM--IAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~-agi~~~dId~li~~~s~--~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~l 181 (465)
.+.+|+..|++++|++ +|++|++||.||+.++. ....+.++..+....|++.+++++.++ +.|++|+.|+.+|.+.
T Consensus 25 ~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~-~~CaSG~~Av~~A~~~ 103 (400)
T PRK13359 25 RADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTIN-RLCGSGMDAVGVAARA 103 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-ccchhHHHHHHHHHHH
Confidence 4579999999999997 59999999999997642 222377889999999999779999999 4999999999999999
Q ss_pred HhcCCCCEEEEEEecCCCC
Q 039047 182 FKTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 182 l~~g~~~~aLVV~~E~~s~ 200 (465)
+++|..+.+|+++.|++|.
T Consensus 104 I~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 104 IKSGEAALMIAGGVESMSR 122 (400)
T ss_pred HHcCCCCEEEEeeeeccCC
Confidence 9999999999999999986
No 104
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.82 E-value=2.8e-07 Score=94.12 Aligned_cols=121 Identities=6% Similarity=0.047 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHcCC--CcCCcCEEEEeecCC-----------------C--------CCC-hHHHHHHHHcCCCCC
Q 039047 106 MEEFFEDSIAKILDRSGI--SPKEIDILVVNISMI-----------------A--------IMP-SLSSRIINRYKMRKD 157 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi--~~~dId~li~~~s~~-----------------~--------~~P-s~a~~i~~~lgl~~~ 157 (465)
...++..|++++++++|+ +++++.+++-++... . ..| ..+.+|...+|++.
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G- 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG- 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC-
Confidence 346788999999999996 566776655332111 0 011 36788889999984
Q ss_pred ceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCC-----C-----------------CCCCCccchhhhh
Q 039047 158 IKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPN-----W-----------------YSGNDRSMILANC 215 (465)
Q Consensus 158 ~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~-----~-----------------~~~~dr~~~~~~~ 215 (465)
+.+.++. +|++++.||..|.++|+.|..+.+||.++|..... | ..+-|+.. ...
T Consensus 83 -p~~ti~~-aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r--~G~ 158 (342)
T PRK14691 83 -PIGAPVT-ACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTAR--DGF 158 (342)
T ss_pred -Ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCC--CCc
Confidence 7888885 99999999999999999999999999999973210 0 00111110 267
Q ss_pred hccccceEEEEecCCc
Q 039047 216 LFRSGGAVILLSNKRS 231 (465)
Q Consensus 216 lfgDGaaA~lLs~~~~ 231 (465)
++||||+++||++...
T Consensus 159 v~gEGAa~lvLes~~~ 174 (342)
T PRK14691 159 VMGEGAGLLIIEELEH 174 (342)
T ss_pred cccceEEEEEEeeHHH
Confidence 8999999999997654
No 105
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.79 E-value=2.7e-08 Score=103.93 Aligned_cols=93 Identities=14% Similarity=0.128 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHc-CCCcCCcCEEEEeec-CC-CCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 106 MEEFFEDSIAKILDRS-GISPKEIDILVVNIS-MI-AIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~a-gi~~~dId~li~~~s-~~-~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
..+|+.+|+++||+++ |++|+|||.||+++. +. ...+..+..++..+|++ .++.+.++. +|+++..++..|.+.+
T Consensus 27 ~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~~-~caSG~~av~~Aa~~I 104 (406)
T PRK07851 27 PDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVNR-YCSSSLQTTRMAFHAI 104 (406)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeeec-cchhHHHHHHHHHHHH
Confidence 5699999999999996 999999999998642 22 22356678899999996 589999995 9999999999999999
Q ss_pred hcCCCCEEEEEEecCCCC
Q 039047 183 KTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 183 ~~g~~~~aLVV~~E~~s~ 200 (465)
++|..+.|||++.|+.|.
T Consensus 105 ~sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 105 KAGEGDVFISAGVETVSR 122 (406)
T ss_pred HCCCCCEEEEeeEEeccc
Confidence 999999999999998765
No 106
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.78 E-value=3.2e-08 Score=103.21 Aligned_cols=95 Identities=12% Similarity=0.120 Sum_probs=83.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-C-CCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-M-IAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~-~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
...+|+.+|++++|+++|++|++||.+++++. + ....+..+..+....|++..++.+.++. +|++|+.|+..|.+.+
T Consensus 25 ~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~~-~CaSG~~Ai~~A~~~I 103 (401)
T PRK08131 25 RPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNR-LCASGLAAVIDAARAI 103 (401)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeeec-hhhhHHHHHHHHHHHH
Confidence 45799999999999999999999999999753 2 2223556677889999986799999995 9999999999999999
Q ss_pred hcCCCCEEEEEEecCCCC
Q 039047 183 KTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 183 ~~g~~~~aLVV~~E~~s~ 200 (465)
++|..+.+|+++.|++|.
T Consensus 104 ~sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 104 TCGEGDLYLAGGVESMSR 121 (401)
T ss_pred HCCCCCEEEEEEecCCCC
Confidence 999999999999999986
No 107
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.78 E-value=2.8e-08 Score=103.57 Aligned_cols=95 Identities=9% Similarity=0.065 Sum_probs=83.4
Q ss_pred hHHHHHHHHHHHHHHH-cCCCcCCcCEEEEeecC--CCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDR-SGISPKEIDILVVNISM--IAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~-agi~~~dId~li~~~s~--~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~l 181 (465)
.+.+|+..|++.+|++ +|++|++||.||+++.. ....+..+..+...+|++.+++++.++ ++|++|+.|+..|.+.
T Consensus 25 ~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~~~ 103 (401)
T PRK09050 25 RADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAARA 103 (401)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHHHH
Confidence 3579999999999996 79999999999997532 222356777899999998679999999 5999999999999999
Q ss_pred HhcCCCCEEEEEEecCCCC
Q 039047 182 FKTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 182 l~~g~~~~aLVV~~E~~s~ 200 (465)
+++|..+.+|+++.|++|.
T Consensus 104 I~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 104 IKAGEAELMIAGGVESMSR 122 (401)
T ss_pred HHCCCCCEEEEeccccccc
Confidence 9999999999999999986
No 108
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.77 E-value=3.2e-08 Score=102.88 Aligned_cols=93 Identities=13% Similarity=0.101 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecC-CC--CCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISM-IA--IMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~-~~--~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
..+|+.+|++++|+++|++++|||.||++++. .. ..+..+..+...+|++ .++.++++ ++|++++.||.+|..++
T Consensus 22 ~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A~~~I 99 (389)
T PRK07516 22 LESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAALDAI 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHHHHHH
Confidence 46899999999999999999999999986531 11 1111222334456776 68999999 59999999999999999
Q ss_pred hcCCCCEEEEEEecCCCC
Q 039047 183 KTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 183 ~~g~~~~aLVV~~E~~s~ 200 (465)
++|..+++||+++|..|.
T Consensus 100 ~sG~~d~vLvvg~e~~s~ 117 (389)
T PRK07516 100 EAGRARIVLVVGAEKMTA 117 (389)
T ss_pred HCCCCCEEEEEEehhhcc
Confidence 999999999999998653
No 109
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.75 E-value=3.4e-08 Score=103.89 Aligned_cols=95 Identities=20% Similarity=0.218 Sum_probs=82.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
...+|+.+|++++|+++|++|++||.+|+++. .....+.++..+.-..|++..++.+.++ ++|++|+.|+.+|.+.++
T Consensus 30 ~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~I~ 108 (430)
T TIGR02446 30 PAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAESIM 108 (430)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHHHH
Confidence 45799999999999999999999999999754 2222355677777778998679999999 599999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+.+|+++.|++|.
T Consensus 109 sG~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 109 AGAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCCEEEEeeeEcccC
Confidence 99999999999999985
No 110
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.74 E-value=4.4e-08 Score=102.09 Aligned_cols=95 Identities=12% Similarity=0.070 Sum_probs=83.4
Q ss_pred hHHHHHHHHHHHHHHH-cCCCcCCcCEEEEeec--CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDR-SGISPKEIDILVVNIS--MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~-agi~~~dId~li~~~s--~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~l 181 (465)
.+.+|+.+|++.+|++ +|++|++||.||+.+. .....+..+..+...+|++.+++++.|+. +|++|+.|+..|.+.
T Consensus 24 ~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~-~CaSG~~Ai~~a~~~ 102 (400)
T TIGR02430 24 RADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVNR-LCGSGLDAIGMAARA 102 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEeec-hhhhHHHHHHHHHHH
Confidence 3579999999999996 6999999999999653 22223667778999999986799999995 999999999999999
Q ss_pred HhcCCCCEEEEEEecCCCC
Q 039047 182 FKTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 182 l~~g~~~~aLVV~~E~~s~ 200 (465)
+++|..+.+|+++.|++|.
T Consensus 103 I~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 103 IKAGEADLLIAGGVESMSR 121 (400)
T ss_pred HHCCCCCEEEEeccccccC
Confidence 9999999999999999985
No 111
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.74 E-value=4.6e-08 Score=101.69 Aligned_cols=95 Identities=7% Similarity=0.163 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecC-CCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISM-IAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~-~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
.+.+|+.+|++++|+++|++|+|||.+|+++.. ....+..+..++..+|++..++.+.++ .+|++++.++..|.+.++
T Consensus 25 ~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~ 103 (388)
T PRK06366 25 KAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAAREIM 103 (388)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHHHh
Confidence 357899999999999999999999999986532 111234567789999998568999999 599999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+.+||++.|++|.
T Consensus 104 sG~~d~vla~G~e~ms~ 120 (388)
T PRK06366 104 LGERDLVIAGGMENMSN 120 (388)
T ss_pred cCCCCEEEEEeeEcccc
Confidence 99999999999899773
No 112
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.73 E-value=4.1e-08 Score=102.61 Aligned_cols=91 Identities=10% Similarity=0.175 Sum_probs=72.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCC-----ChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHH
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIM-----PSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVR 179 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~-----Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~ 179 (465)
..+|+.+|++++|+++|++|+|||.+|++++ +++.. +.....++ .++. .++++++++ +|++++.+|.+|.
T Consensus 26 ~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~~~v~~-~Casg~~al~~Aa 101 (403)
T PRK06289 26 FADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALW-GVPASRHEA-ACASGSVATLAAM 101 (403)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCC-CCceeeccc-ccHHHHHHHHHHH
Confidence 4699999999999999999999999998643 33221 22222222 3443 467999995 9999999999999
Q ss_pred HHHhcCCCCEEEEEEecCCCC
Q 039047 180 SVFKTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 180 ~ll~~g~~~~aLVV~~E~~s~ 200 (465)
.++++|..++|||+++|+.|.
T Consensus 102 ~~I~sG~~~~VLvvg~e~~s~ 122 (403)
T PRK06289 102 ADLRAGRYDVALVVGVELMKT 122 (403)
T ss_pred HHHHcCCCCEEEEEEEEecCC
Confidence 999999999999999998653
No 113
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.70 E-value=5.3e-08 Score=94.76 Aligned_cols=189 Identities=15% Similarity=0.217 Sum_probs=110.8
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhcc-CC-cchHHHHHHHHHHcCcc--ceEeecCcc---------ccCCCC
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTKN-LG-LNEYKFLLKAIVSSGIG--EQTYSPRIM---------FAGRED 95 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~-~~-~~~~~f~~ki~~~sGI~--~r~~~~~~~---------~~~~~~ 95 (465)
++|.|+++|+..|.. .+.+++.+.+..... +. .++ + ++..++. ......+.. ...++.
T Consensus 2 ~~V~ItG~g~~~p~g---~~~~~~w~~L~~g~~~~~~~~~-r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (254)
T PF00109_consen 2 RRVVITGMGCVTPGG---DGLEEFWEALLSGRSGIRPIPE-R-----WDPSDYYDPPSRVAGEIDDKKGGFIDDFDFDAY 72 (254)
T ss_dssp S-EEEEEEEEEBTTB---SSHHHHHHHHHTT---EEESCS-S-----SCHTTSTTSSCSEEECBSSSEESSSTTTCGGGT
T ss_pred CEEEEEEEEEECcCC---CCHHHHHhhhccCceeeeeecc-c-----cccccccccCCcccccccccccceeeecccccc
Confidence 589999999999996 788998888754211 00 000 0 0011110 000111000 000000
Q ss_pred CCChh----hhhhhHHHHHHHHHHHHHHHcCCCcCCcC-----EEEEeecCC------------C------C------CC
Q 039047 96 NPTLQ----DGIDEMEEFFEDSIAKILDRSGISPKEID-----ILVVNISMI------------A------I------MP 142 (465)
Q Consensus 96 ~~t~~----~~~~e~~~la~~Aa~~aL~~agi~~~dId-----~li~~~s~~------------~------~------~P 142 (465)
..... ........|+..|+.+||+++|+++++++ .|+++++.. . + .|
T Consensus 73 ~~~~~~~~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 152 (254)
T PF00109_consen 73 FFGIPPREARRMDRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLP 152 (254)
T ss_dssp STCHHHHHHHTS-HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHST
T ss_pred cccccchhhhhhhhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccc
Confidence 01111 12235578999999999999999985432 233333211 0 0 23
Q ss_pred -hHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEec-CCCCCC---------CCCCCccch
Q 039047 143 -SLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSE-SLSPNW---------YSGNDRSMI 211 (465)
Q Consensus 143 -s~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E-~~s~~~---------~~~~dr~~~ 211 (465)
..+.+|+..+|++. +++.+++ +|++++.||..|..+|++|..+.+||.++| ..++.. ....++...
T Consensus 153 ~~~a~~ia~~~gl~G--~~~tv~~-acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~p 229 (254)
T PF00109_consen 153 NSAAGRIAILFGLRG--PSYTVST-ACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRP 229 (254)
T ss_dssp THHHHHHHHHHTB-S--SEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGS
T ss_pred cccccchhhhcCCCC--ccccccc-cccccccccchhccccccccccccccccccccccccccccccccccccccccccc
Confidence 36789999999974 7888886 999999999999999999999999999999 444410 111111000
Q ss_pred ----hhhhhccccceEEEEecC
Q 039047 212 ----LANCLFRSGGAVILLSNK 229 (465)
Q Consensus 212 ----~~~~lfgDGaaA~lLs~~ 229 (465)
-...++|+||+++||++.
T Consensus 230 f~~~~~G~v~gEGa~~~vLe~~ 251 (254)
T PF00109_consen 230 FDPFADGFVLGEGAGALVLERL 251 (254)
T ss_dssp TBTTB-SB-BB-EEEEEEEEEH
T ss_pred cCCCCCCEEEECceEEEEEEEh
Confidence 036899999999999864
No 114
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.66 E-value=1.3e-07 Score=99.60 Aligned_cols=95 Identities=18% Similarity=0.259 Sum_probs=79.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCC--cCEEEEeecC---CCCCChHHHHHHHHcCCC------CCceeeeecCCcchHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKE--IDILVVNISM---IAIMPSLSSRIINRYKMR------KDIKVFNLTGMGCSASLI 173 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~d--Id~li~~~s~---~~~~Ps~a~~i~~~lgl~------~~~~~~~l~~~gCs~~~~ 173 (465)
...+|+.+|++++|+++|++++| ||.+|+++.. +...+.++..+...+|++ ..++.+.++. +|++++.
T Consensus 47 s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~-~caSG~~ 125 (438)
T PTZ00455 47 TLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEG-ACASGGL 125 (438)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEEC-cCHHHHH
Confidence 35799999999999999999999 9999986531 112355666777666554 3689999995 9999999
Q ss_pred HHHHHHHHHhcCCCCEEEEEEecCCCC
Q 039047 174 SVDIVRSVFKTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 174 al~~A~~ll~~g~~~~aLVV~~E~~s~ 200 (465)
|+..|.+.|++|..+.|||+++|+.|.
T Consensus 126 Ai~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 126 AVQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 999999999999999999999999775
No 115
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.65 E-value=1.3e-07 Score=98.54 Aligned_cols=93 Identities=15% Similarity=0.147 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCC-CCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhc
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISMI-AIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKT 184 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~-~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~ 184 (465)
..+|+.+|++++|+++|++++|||.+++++... .........+.+.+|++ .++.+.+. ++|++++.++..|...|++
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~-~~c~sg~~ai~~A~~~I~s 104 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVE-NFCATGSEAFRGAVYAVAS 104 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEe-cccHHHHHHHHHHHHHHHC
Confidence 469999999999999999999999999865321 11112235678899998 48899999 5999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 039047 185 YKNMNAMVVTSESLSP 200 (465)
Q Consensus 185 g~~~~aLVV~~E~~s~ 200 (465)
|..+.+||++.|+.|.
T Consensus 105 G~~d~vlv~G~e~~s~ 120 (398)
T PRK06157 105 GAYDIALALGVEKLKD 120 (398)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998754
No 116
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.64 E-value=1.1e-07 Score=98.79 Aligned_cols=95 Identities=12% Similarity=0.127 Sum_probs=81.8
Q ss_pred hHHHHHHHHHHHHHHH-cCCCcCCcCEEEEeecC-CCC-CChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDR-SGISPKEIDILVVNISM-IAI-MPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~-agi~~~dId~li~~~s~-~~~-~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~l 181 (465)
.+.+|+..+++.+|++ +|++|++||.+|+++.. ... .+..+..+....|++..++.+.++. +|++|+.|+.+|...
T Consensus 26 ~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~~-~caSG~~Ai~~A~~~ 104 (387)
T PRK08947 26 RAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVNR-LCGSSMQALHDAARA 104 (387)
T ss_pred CHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeeec-hhHHHHHHHHHHHHH
Confidence 3579999999999997 79999999999997643 222 2455667888899986699999995 999999999999999
Q ss_pred HhcCCCCEEEEEEecCCCC
Q 039047 182 FKTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 182 l~~g~~~~aLVV~~E~~s~ 200 (465)
+++|..+.+||++.|++|.
T Consensus 105 I~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 105 IMTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HHCCCCCEEEEcccccccc
Confidence 9999999999999999885
No 117
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.60 E-value=4.9e-06 Score=103.06 Aligned_cols=215 Identities=15% Similarity=0.143 Sum_probs=129.0
Q ss_pred HHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCC-CCCC---------C-------CCC
Q 039047 144 LSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESL-SPNW---------Y-------SGN 206 (465)
Q Consensus 144 ~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~-s~~~---------~-------~~~ 206 (465)
++.+|...||++. +++.++. +|++++.||.+|.+.|++|..+.+||.+++.. ++.. . +..
T Consensus 185 ~A~RIS~~f~L~G--ps~tVdt-ACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLGG--MNCVVDA-ACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCCC--Ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 5789999999984 7899995 99999999999999999999999999998763 2110 0 111
Q ss_pred CccchhhhhhccccceEEEEecCCccccccceeeeceE-EeeeCCCCCCCccceeccCCCCCCceecCCChhHHHHHHHh
Q 039047 207 DRSMILANCLFRSGGAVILLSNKRSLERNALFKLKCLV-RTHHGARDDSYGCCVQTEDEQGRPGFHLGKNLPKAATRAFV 285 (465)
Q Consensus 207 dr~~~~~~~lfgDGaaA~lLs~~~~~~~~~~~~L~~~~-~t~~~sd~~~~~~~~~~~d~~G~~g~~l~~d~p~~~~~~~~ 285 (465)
.+. .+.++|+|++++||.+-...... +=++..++ .+...+|+.. . ++. . |...+
T Consensus 262 ~~a---dG~v~GEGag~vvLkrL~dA~~d-Gd~IyAvI~G~g~~~DG~~-~------------~it-a---P~~~g---- 316 (2582)
T TIGR02813 262 IDS---KGMMIGEGIGMMALKRLEDAERD-GDRIYAVIKGVGASSDGKF-K------------SIY-A---PRPEG---- 316 (2582)
T ss_pred CCC---CcccccceEEEEEeCcHHHHHhC-CCcEEEEEEEEEEcCCCCC-C------------CCc-C---CCHHH----
Confidence 111 26789999999999975432110 11111222 2222223211 0 110 0 11111
Q ss_pred hhhhhcCCCcchHHHHHHHHHHHHHHHHhccCCcCCcCCCCCccCCccEEEecCCCHHHH-----HHHHhhCCCCc---c
Q 039047 286 DNLRVISPMILPIRELLRYALVTFVRKMSNNTPKGEKKAGVNFRTGVDHFCIHTGGKAVI-----DGIGFSLDLTE---Y 357 (465)
Q Consensus 286 ~~i~~~~p~~l~~~e~~~~a~~~v~~~~l~~~~l~~~g~~~~~~~did~~~~H~~~~~ii-----~~i~~~Lgl~~---e 357 (465)
+ ..+.++.+ +.+|+.| ++|+++..|--|..+- ..+.+.++-.. .
T Consensus 317 ---------------q-----~~~i~~Al-----~~Agi~p---~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~ 368 (2582)
T TIGR02813 317 ---------------Q-----AKALKRAY-----DDAGFAP---HTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQ 368 (2582)
T ss_pred ---------------H-----HHHHHHHH-----HHcCCCH---HHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCC
Confidence 1 01233344 3577875 8999999997665443 34555555321 1
Q ss_pred cchhHHHHH-hhhccccccHHHHHHHH---HHHcCCCC--------------------------------CC--CEEEEE
Q 039047 358 DLEPARMTL-HRFGNTSAASLWYVLAY---MEAKKRLK--------------------------------KG--DRVLMI 399 (465)
Q Consensus 358 ~~~~s~~~l-~~~GNtssasi~~~L~~---~~~~g~l~--------------------------------~G--d~vl~~ 399 (465)
.+. .... ..+||+-+|+=...|.. ++++|.+. .| .+++.-
T Consensus 369 ~~~--vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vn 446 (2582)
T TIGR02813 369 HIA--LGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGIS 446 (2582)
T ss_pred Cce--eeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEe
Confidence 111 1112 46899988887766643 23333211 11 456777
Q ss_pred eeCchhhhheeeeEEEe
Q 039047 400 SFGAGFKCNSCVWEVVR 416 (465)
Q Consensus 400 sfGaG~~~~~~v~~~~~ 416 (465)
+||.|-+-..++++-..
T Consensus 447 sfGfGGtN~hvvlee~~ 463 (2582)
T TIGR02813 447 SFGFGGTNFHMVLEEYS 463 (2582)
T ss_pred CccCCCeeEEEEEeecC
Confidence 99999998889988653
No 118
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.59 E-value=1.6e-07 Score=97.60 Aligned_cols=95 Identities=12% Similarity=0.113 Sum_probs=80.8
Q ss_pred hHHHHHHHHHHHHHHH-cCCCcCCcCEEEEeecC-CCC-CChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDR-SGISPKEIDILVVNISM-IAI-MPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~-agi~~~dId~li~~~s~-~~~-~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~l 181 (465)
.+.+|+.+|++.+|++ +|++|++||.+++++.. ... .+..+..+....|++..++++.++. +|++|+.|+..|.+.
T Consensus 24 ~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~~-~CaSG~~Ai~~Aa~~ 102 (385)
T TIGR02445 24 RAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVNR-LCGSSMQALHDAARA 102 (385)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhhh-hhHHHHHHHHHHHHH
Confidence 4579999999999997 59999999999997542 211 3446666666889987799999995 999999999999999
Q ss_pred HhcCCCCEEEEEEecCCCC
Q 039047 182 FKTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 182 l~~g~~~~aLVV~~E~~s~ 200 (465)
+++|..+.+|+++.|++|.
T Consensus 103 I~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 103 IMTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HHCCCCCEEEEeeehhccc
Confidence 9999999999999999875
No 119
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.58 E-value=2.2e-07 Score=97.86 Aligned_cols=93 Identities=12% Similarity=0.060 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecC-CCCCChHH-HHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISM-IAIMPSLS-SRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~-~~~~Ps~a-~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
..+|+.+|+++||+++|++++|||.+++++.. ......++ ..++..+|+++ ++++.+.. +|+++..|+..|...|+
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~-~~~~~v~~-~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVP-KPSKRIEG-GGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCC-CceEEEeC-CcHHHHHHHHHHHHHHH
Confidence 46999999999999999999999998876522 11122333 34679999984 89999995 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+.|||+++|..|.
T Consensus 115 sG~~~~vLv~G~e~~s~ 131 (430)
T PRK06365 115 SGRMDCVAVYGFETMSH 131 (430)
T ss_pred cCCCCEEEEEEeeeccc
Confidence 99999999999997653
No 120
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.56 E-value=3.2e-07 Score=96.50 Aligned_cols=95 Identities=11% Similarity=0.168 Sum_probs=79.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCC-CCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMI-AIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~-~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
...+|+.+|++++|+++|+++++||.+|+++... ...+.++..+.-..|++..++.+.++ ++|++|+.++..|...|+
T Consensus 30 ~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~I~ 108 (427)
T PRK09268 30 SNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANKIA 108 (427)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHHHH
Confidence 3579999999999999999999999999975321 11244566655666676568999999 599999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
+|..+.+||++.|.+|.
T Consensus 109 sG~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 109 LGQIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCCCEEEEeeEEccCC
Confidence 99999999999999885
No 121
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.44 E-value=4.7e-06 Score=81.84 Aligned_cols=120 Identities=18% Similarity=0.240 Sum_probs=77.3
Q ss_pred hhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 104 DEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
+.-..|..+|++.+|+|++++++|||.++-.--..... .++..++.|++ +.+.+.| +||....+|.+|..++.
T Consensus 49 kAE~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i--~s~f~ar~l~i----Pf~Glyg-ACST~~e~l~laa~~vd 121 (329)
T PF07451_consen 49 KAESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQII--SSSFAARDLGI----PFLGLYG-ACSTMMESLALAAMLVD 121 (329)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCC--HHHHHHHHHT------EEEB---CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhH--HHHHHHHhcCC----Cccchhh-HHHHHHHHHHHHHHHHh
Confidence 33457889999999999999999999888764333333 35777888776 5899998 99999999999999999
Q ss_pred cCCCCEEEEEEecCCCC---CCCC----CCCccchhhhhhccccceEEEEecCCcc
Q 039047 184 TYKNMNAMVVTSESLSP---NWYS----GNDRSMILANCLFRSGGAVILLSNKRSL 232 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~---~~~~----~~dr~~~~~~~lfgDGaaA~lLs~~~~~ 232 (465)
.|-.+++|+.++-.... .|.. +..|.. ....=--||+|+||++.+..
T Consensus 122 gg~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp~--tAqwTVTGaGa~il~~~~~~ 175 (329)
T PF07451_consen 122 GGFADYVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAAILSKEGSG 175 (329)
T ss_dssp TTS-SEEEEEEEE-CCHHHHHT---GGGT----T--T--EE--EEEEEEEESS--S
T ss_pred CCCcceEEEEeccccchhhhhccCchhccCCCCC--cccEEEeceEEEEEecCCCC
Confidence 99999999888755432 1211 122221 13334678999999987653
No 122
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=98.40 E-value=3e-06 Score=82.92 Aligned_cols=95 Identities=15% Similarity=0.213 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHH-HHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhc
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRII-NRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKT 184 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~-~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~ 184 (465)
..+|...+.+..+++++++|++|+-|++.+......-...++++ -.-|++..++...++ ..|++|+.|+.....-+++
T Consensus 61 pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvpv~tvN-RqCsSGLqaVadiA~~Ir~ 139 (435)
T KOG1389|consen 61 PDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADIAAKIRA 139 (435)
T ss_pred hHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccchhhhh-hhhhhHHHHHHHHHHHHhc
Confidence 35888999999999999999999999986432111114444444 456899888888888 6999999999999999999
Q ss_pred CCCCEEEEEEecCCCCC
Q 039047 185 YKNMNAMVVTSESLSPN 201 (465)
Q Consensus 185 g~~~~aLVV~~E~~s~~ 201 (465)
|.++--|-.+.|.++.+
T Consensus 140 G~ydIGla~GvESMt~~ 156 (435)
T KOG1389|consen 140 GFYDIGLAAGVESMTTN 156 (435)
T ss_pred Cceeeecccchhhhccc
Confidence 99999999999999875
No 123
>PRK07937 lipid-transfer protein; Provisional
Probab=98.38 E-value=2.9e-05 Score=79.76 Aligned_cols=89 Identities=13% Similarity=-0.005 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCC-ChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcC
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNISMIAIM-PSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTY 185 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~-Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g 185 (465)
.+|+.+|+++||+++|++++|||.++.+++..... ......+...+|+.+..+...+. +++..++..|...+++|
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~----~~g~~a~~~A~~aI~sG 100 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPINESHVE----MDAAWALYEAWVKLLTG 100 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccCCCCCceEEec----CcHHHHHHHHHHHHhcC
Confidence 58999999999999999999999885443311111 11123455667874334455544 35777999999999999
Q ss_pred CCCEEEEEEecCCC
Q 039047 186 KNMNAMVVTSESLS 199 (465)
Q Consensus 186 ~~~~aLVV~~E~~s 199 (465)
..+.|||++.|+.+
T Consensus 101 ~~d~VLv~g~~k~~ 114 (352)
T PRK07937 101 EVDTALVYGFGKSS 114 (352)
T ss_pred CCCEEEEEEecccC
Confidence 99999999999754
No 124
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.30 E-value=7.6e-05 Score=77.87 Aligned_cols=122 Identities=11% Similarity=0.236 Sum_probs=89.0
Q ss_pred hhHHHHHHHHHHHHHHHcCCC-cCCcC--EEE-EeecC---C---------------C---------CCC-hHHHHHHHH
Q 039047 104 DEMEEFFEDSIAKILDRSGIS-PKEID--ILV-VNISM---I---------------A---------IMP-SLSSRIINR 151 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~agi~-~~dId--~li-~~~s~---~---------------~---------~~P-s~a~~i~~~ 151 (465)
.....++..|+++|++++|++ ..+++ .-+ +.++. . . ..| ..+..++..
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 455789999999999999998 33343 222 22210 0 0 123 356788889
Q ss_pred cCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecC-CCC--------------C-------CCCC-CCc
Q 039047 152 YKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSES-LSP--------------N-------WYSG-NDR 208 (465)
Q Consensus 152 lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~-~s~--------------~-------~~~~-~dr 208 (465)
+|++. +.+.++. +|+++..||..|.++|+.|..+.+++.++|. ++. . +.+. .+|
T Consensus 149 ~g~~G--~~~~~~t-ACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~R 225 (412)
T COG0304 149 FGLKG--PNYTPVT-ACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNR 225 (412)
T ss_pred hCCCC--CcCChhh-hHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCC
Confidence 99974 7888995 9999999999999999999999999999977 222 1 0111 234
Q ss_pred cchhhhhhccccceEEEEecCCcc
Q 039047 209 SMILANCLFRSGGAVILLSNKRSL 232 (465)
Q Consensus 209 ~~~~~~~lfgDGaaA~lLs~~~~~ 232 (465)
+ ..++|.||+++||+..+..
T Consensus 226 d----Gfv~gEGag~lVLE~~ehA 245 (412)
T COG0304 226 D----GFVIGEGAGALVLEELEHA 245 (412)
T ss_pred C----CEEEecceeEEEecChhhH
Confidence 4 6899999999999987654
No 125
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.29 E-value=2.7e-06 Score=88.42 Aligned_cols=88 Identities=13% Similarity=0.083 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcC
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTY 185 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g 185 (465)
..+|+.+|+++||+++|++++|||.+++++.. .+.....++..+|++ ..+...+. .||+++..++..|...|++|
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~~~~~~~~lGl~-~~~~~~v~-~gg~s~~~a~~~A~~~I~sG 99 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLADVDGYFCAGDA---PGLGPASMVDYLGLK-LRHVDSTE-TGGSSYLAHVGHAAQAIAAG 99 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCccHHHHHHhCCCC-Ceeecccc-CCcHHHHHHHHHHHHHHHcC
Confidence 46999999999999999999999997753211 111124588999997 57888888 49999999999999999999
Q ss_pred CCCEEEEEEecCC
Q 039047 186 KNMNAMVVTSESL 198 (465)
Q Consensus 186 ~~~~aLVV~~E~~ 198 (465)
..+.||||+.|+.
T Consensus 100 ~~d~vLvvg~e~~ 112 (388)
T PRK08142 100 KCSVALITLAGRP 112 (388)
T ss_pred CCCEEEEEeeeec
Confidence 9999999999974
No 126
>PRK07855 lipid-transfer protein; Provisional
Probab=98.14 E-value=9.8e-06 Score=84.27 Aligned_cols=85 Identities=14% Similarity=0.091 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcC
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTY 185 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g 185 (465)
..+|+.+|+++||+++|++++|||.+++++. . ..+. ..+++.+|+++..+...+.+ ||+++..++..|...|++|
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~-~-~~~~--~~l~~~lGl~~~~~~~~v~~-gg~sg~~~~~~A~~~I~sG 98 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVDGLVTFTM-D-TNPE--IAVARALGIGELKFFSRIHY-GGGAACATVQQAAMAVATG 98 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-c-cccH--HHHHHHCCCCCCcceeeecC-CcHHHHHHHHHHHHHHHCC
Confidence 4589999999999999999999999987432 1 2222 46889999974245568885 9999999999999999999
Q ss_pred CCCEEEEEEe
Q 039047 186 KNMNAMVVTS 195 (465)
Q Consensus 186 ~~~~aLVV~~ 195 (465)
..+.|||+++
T Consensus 99 ~~d~vLv~g~ 108 (386)
T PRK07855 99 VADVVVCYRA 108 (386)
T ss_pred CCCEEEEEee
Confidence 9999999987
No 127
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.07 E-value=0.00014 Score=84.57 Aligned_cols=191 Identities=14% Similarity=0.168 Sum_probs=119.1
Q ss_pred CceEEEeeeeecCCCCCccCHHHHHHHHHhhcc----CCcchHHHHHHHHHHcCc-----cceEeecCc-ccc----CCC
Q 039047 29 KECYILDYQCYKPTDDRMVSTDFAGQVIKRTKN----LGLNEYKFLLKAIVSSGI-----GEQTYSPRI-MFA----GRE 94 (465)
Q Consensus 29 ~~v~I~~~~~y~P~~~~~v~~~~~~~~~~~~~~----~~~~~~~f~~ki~~~sGI-----~~r~~~~~~-~~~----~~~ 94 (465)
.+|-|++++|.+|. .-+.+++-+.+..... +.++. |-++..+- ..++|.... .++ .++
T Consensus 4 ~~IAIiGm~~rfPg---a~~~~~~W~~l~~g~~~i~~ip~~r-----wd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~ 75 (1061)
T COG3321 4 EPIAIIGMACRFPG---ADSPEEFWDLLKEGRDEITEVPADR-----WDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDA 75 (1061)
T ss_pred CcEEEEeccccCCC---CCCHHHHHHHHhcCCceeeecChhh-----hhHhhccCCccccccccccccccccCCccccCH
Confidence 34999999999999 3678888887754321 11111 11111111 111221111 010 010
Q ss_pred C----CCChhhhhhhHHHHHHHHHHHHHHHcCCCcCCcC----EEEEee-cCCCCCC-------------------hHHH
Q 039047 95 D----NPTLQDGIDEMEEFFEDSIAKILDRSGISPKEID----ILVVNI-SMIAIMP-------------------SLSS 146 (465)
Q Consensus 95 ~----~~t~~~~~~e~~~la~~Aa~~aL~~agi~~~dId----~li~~~-s~~~~~P-------------------s~a~ 146 (465)
. +|+.++..+--..|..+.+.++||++|+.|+.+. .|+.+. ..++... ..+.
T Consensus 76 ~fFgisPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~ 155 (1061)
T COG3321 76 LFFGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAG 155 (1061)
T ss_pred HHcCCCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHH
Confidence 0 1222333333456999999999999999999888 455443 2222211 2678
Q ss_pred HHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCC-CC-CC--------CCCC--ccc--hh
Q 039047 147 RIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLS-PN-WY--------SGND--RSM--IL 212 (465)
Q Consensus 147 ~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s-~~-~~--------~~~d--r~~--~~ 212 (465)
+|...|+++ -+++.|. .+||+++.|+.+|.+.|+.|..+.+|+-+....- +. ++ ..+. +.. --
T Consensus 156 Risy~l~l~--GPs~~vd-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~a 232 (1061)
T COG3321 156 RISYVLGLS--GPSVTVD-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADA 232 (1061)
T ss_pred HHHHHhcCC--CCCcccc-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCC
Confidence 999999997 4899999 5999999999999999999999999988887642 21 11 1110 100 01
Q ss_pred hhhhccccceEEEEecCC
Q 039047 213 ANCLFRSGGAVILLSNKR 230 (465)
Q Consensus 213 ~~~lfgDGaaA~lLs~~~ 230 (465)
..++.|.|+++++|.+-.
T Consensus 233 dG~v~geG~g~vvLKrl~ 250 (1061)
T COG3321 233 DGYVRGEGAGVVVLKRLS 250 (1061)
T ss_pred CCEEEeeeEEEEEEEEhH
Confidence 256899999999998754
No 128
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=97.99 E-value=3.4e-05 Score=80.14 Aligned_cols=89 Identities=9% Similarity=0.068 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHcC-CCc-CCcCEEEEeecC-CCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 106 MEEFFEDSIAKILDRSG-ISP-KEIDILVVNISM-IAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~ag-i~~-~dId~li~~~s~-~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
..+|+.+|+++||+++| +++ +|||.+++++.. +.........+...+|+. ..+.+.+ |+++..++..|...+
T Consensus 25 ~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~-~~~~~~v----~~sg~~a~~~A~~aV 99 (385)
T PRK06066 25 FREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGA-MRPTMTV----AGDGLQGLAHAVMHI 99 (385)
T ss_pred HHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccC-CCCeEEE----eCcHHHHHHHHHHHH
Confidence 46899999999999999 997 799999875321 111112234566889985 2344444 788999999999999
Q ss_pred hcCCCCEEEEEEecCCC
Q 039047 183 KTYKNMNAMVVTSESLS 199 (465)
Q Consensus 183 ~~g~~~~aLVV~~E~~s 199 (465)
++|..++|||++.|+.+
T Consensus 100 ~sG~~d~vLv~g~~~~~ 116 (385)
T PRK06066 100 NSGLANVVVVEAHSKPS 116 (385)
T ss_pred HcCCCCEEEEEEEeecc
Confidence 99999999999999653
No 129
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.87 E-value=3e-05 Score=76.33 Aligned_cols=95 Identities=12% Similarity=0.108 Sum_probs=81.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
.+.+|+.-|++.+|++++++++|++-||+.+ ...+..-..+.+.+---|++..+.+..++ +.|++++.|+.+|.+-|+
T Consensus 29 ~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~ 107 (396)
T KOG1390|consen 29 TATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQ 107 (396)
T ss_pred chhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHh
Confidence 4679999999999999999999999999853 23333334556677777898889999999 799999999999999999
Q ss_pred cCCCCEEEEEEecCCCC
Q 039047 184 TYKNMNAMVVTSESLSP 200 (465)
Q Consensus 184 ~g~~~~aLVV~~E~~s~ 200 (465)
.|..+.++..+.|.+|.
T Consensus 108 ~G~~divVaGGmEsMS~ 124 (396)
T KOG1390|consen 108 TGHADIVVAGGMESMSN 124 (396)
T ss_pred cCCccEEEecccchhcc
Confidence 99999999999999986
No 130
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.86 E-value=5.8e-05 Score=78.66 Aligned_cols=95 Identities=11% Similarity=0.141 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHHc--CCCcCCcCEEEEeec--CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHH
Q 039047 106 MEEFFEDSIAKILDRS--GISPKEIDILVVNIS--MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~a--gi~~~dId~li~~~s--~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~l 181 (465)
++++.....+..+++. ++++.+||.+++.|. .....+..+..++...|++.+++.+.++ .+|++++.|+..|...
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av~~A~~~ 105 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAVRLAAQA 105 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHHHHHHHH
Confidence 3455555556665443 688888888888653 2234667889999999999679999999 5999999999999999
Q ss_pred HhcCCCCEEEEEEecCCCCC
Q 039047 182 FKTYKNMNAMVVTSESLSPN 201 (465)
Q Consensus 182 l~~g~~~~aLVV~~E~~s~~ 201 (465)
|++|..+.+|+++.|++|..
T Consensus 106 I~sG~~dvvlagG~E~mS~~ 125 (392)
T COG0183 106 IASGEADVVLAGGVEKMSDA 125 (392)
T ss_pred HHCCCCCEEEEEeeeeccCC
Confidence 99999999999999999874
No 131
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=97.57 E-value=0.00035 Score=69.28 Aligned_cols=62 Identities=27% Similarity=0.359 Sum_probs=46.6
Q ss_pred cchhHHHHHhhhccccccHHHHHHHHHH--HcCCCCCCCEEEEEeeCchhhhheeeeEEEecCC
Q 039047 358 DLEPARMTLHRFGNTSAASLWYVLAYME--AKKRLKKGDRVLMISFGAGFKCNSCVWEVVRDLD 419 (465)
Q Consensus 358 ~~~~s~~~l~~~GNtssasi~~~L~~~~--~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~~~~~~ 419 (465)
+++||...-++.||+.++|++..|..++ .+...-.|+||+|.|+|+|........++..+..
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~~~ 206 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPGAE 206 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TTGG
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCCcc
Confidence 5566666668899999999999999998 3444457999999999999988888877755444
No 132
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.54 E-value=0.00081 Score=67.47 Aligned_cols=122 Identities=12% Similarity=0.193 Sum_probs=88.7
Q ss_pred hhHHHHHHHHHHHHHHHcCCCcC---CcCE----EEEeecCC----------------------CCCC----h-HHHHHH
Q 039047 104 DEMEEFFEDSIAKILDRSGISPK---EIDI----LVVNISMI----------------------AIMP----S-LSSRII 149 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~agi~~~---dId~----li~~~s~~----------------------~~~P----s-~a~~i~ 149 (465)
.....++..|+++||+++++-+. +.|. |.+.+..+ +..| + .+.+|.
T Consensus 92 s~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vs 171 (440)
T KOG1394|consen 92 SKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVS 171 (440)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhh
Confidence 46678999999999999998764 3332 22222111 2233 2 357899
Q ss_pred HHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCC-----CCC----------CC--------C
Q 039047 150 NRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSP-----NWY----------SG--------N 206 (465)
Q Consensus 150 ~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~-----~~~----------~~--------~ 206 (465)
.+||++ -+...++ .+|+.+..+|--|.++|+.|..+..|.-++|.+-. .|. ++ .
T Consensus 172 m~~gl~--GpnhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~ 248 (440)
T KOG1394|consen 172 MKYGLR--GPNHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDK 248 (440)
T ss_pred hhhcCc--CCchhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCcc
Confidence 999997 4888999 59999999999999999999999999989997532 110 11 1
Q ss_pred CccchhhhhhccccceEEEEecCCcc
Q 039047 207 DRSMILANCLFRSGGAVILLSNKRSL 232 (465)
Q Consensus 207 dr~~~~~~~lfgDGaaA~lLs~~~~~ 232 (465)
+|+ .++.|.|++.+||+.-++.
T Consensus 249 ~Rd----GFVmGEGagvlvlEelEHA 270 (440)
T KOG1394|consen 249 KRD----GFVMGEGAGVLVLEELEHA 270 (440)
T ss_pred CCC----ceeeccceeEEehHhHHHH
Confidence 233 6789999999999976544
No 133
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=97.51 E-value=0.00012 Score=70.54 Aligned_cols=89 Identities=18% Similarity=0.311 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcC
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTY 185 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g 185 (465)
++++.+|+.++|+++++.-++|+--++.- -.+. ....+..-.+|+. .++.|++++ .|++|-.||-+|++++++|
T Consensus 30 pd~a~ea~tkal~da~ikys~vqqa~vgyvfgds---tcgqraiyevgmt-gipi~nvnn-ncatgssalflakqiiesg 104 (408)
T KOG1406|consen 30 PDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDS---TCGQRAIYEVGMT-GIPIYNVNN-NCATGSSALFLAKQIIESG 104 (408)
T ss_pred chHHHHHHHHHHHhcCCCHHHHHhhhheeeecCC---ccchHHHHhcccc-CcceeeccC-ccccCchHHHHHHHHHhcC
Confidence 37889999999999999999998655432 1111 1234555689998 699999997 9999999999999999999
Q ss_pred CCCEEEEEEecCCCC
Q 039047 186 KNMNAMVVTSESLSP 200 (465)
Q Consensus 186 ~~~~aLVV~~E~~s~ 200 (465)
..+.||..+-|++++
T Consensus 105 n~dcvlalgfekm~~ 119 (408)
T KOG1406|consen 105 NSDCVLALGFEKMER 119 (408)
T ss_pred CcceEEeechhhhCC
Confidence 999999999999877
No 134
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=96.64 E-value=0.0032 Score=60.62 Aligned_cols=92 Identities=11% Similarity=0.070 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEe----ecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHH
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVN----ISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~----~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~l 181 (465)
+.+|...|++.+|+.+++.++.+|.||+. +|.+ .--++..+.-+.|.+.+.+++.++ .=|.+|+.++-.+.+-
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsD--gIYl~RHvGL~~GvP~e~pALtiN-RLCGSGFQsiVNgaQ~ 104 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSD--GIYLARHVGLRVGVPKETPALTIN-RLCGSGFQSIVNGAQE 104 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCC--ceEeeeccccccCCcCccCceeeh-hhhcccHHHHHhhHHH
Confidence 56899999999999999999999999983 2332 223456666677888889999999 5999999999999999
Q ss_pred HhcCCCCEEEEEEecCCCC
Q 039047 182 FKTYKNMNAMVVTSESLSP 200 (465)
Q Consensus 182 l~~g~~~~aLVV~~E~~s~ 200 (465)
+..+..+.+|.-++|.+|.
T Consensus 105 I~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 105 ICVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred hhcCcceEEEecCcccccc
Confidence 9999999999999999986
No 135
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=96.13 E-value=0.0054 Score=59.93 Aligned_cols=94 Identities=10% Similarity=0.158 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeec-CCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhc
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNIS-MIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKT 184 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s-~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~ 184 (465)
+.+|+.+|...+|+++.++.+.||.+|+.+. ....+.+++...+-.-|.+..+++..++ |+|-+.-.|+-..-.++.+
T Consensus 66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmgliat 144 (465)
T KOG1392|consen 66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIAT 144 (465)
T ss_pred hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEee
Confidence 4689999999999999999999999999763 3444556777777778998889999999 8999999999999999999
Q ss_pred CCCCEEEEEEecCCCC
Q 039047 185 YKNMNAMVVTSESLSP 200 (465)
Q Consensus 185 g~~~~aLVV~~E~~s~ 200 (465)
|.++.++--+.|.+|.
T Consensus 145 g~~dvivaggvelmsd 160 (465)
T KOG1392|consen 145 GNADVIVAGGVELMSD 160 (465)
T ss_pred CCcCEEEEcceeeccc
Confidence 9988888888999886
No 136
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=95.29 E-value=0.03 Score=45.55 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=46.1
Q ss_pred HHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceee---eecCCcchHHHHHHHHHHHHHhcCCCCEEEEEE
Q 039047 118 LDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVF---NLTGMGCSASLISVDIVRSVFKTYKNMNAMVVT 194 (465)
Q Consensus 118 L~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~---~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~ 194 (465)
|+++|++++|||.++.... .......+.+++|++.+.... +..+++|++-..+|..+..-=+..+.+++|+++
T Consensus 1 L~~~g~~~~did~~i~hq~----~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQA----SKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-SS----SHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCCC----CHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 6899999999999998642 234455688999998543322 233457777777776655532334578888887
Q ss_pred ec
Q 039047 195 SE 196 (465)
Q Consensus 195 ~E 196 (465)
.-
T Consensus 77 ~G 78 (90)
T PF08541_consen 77 FG 78 (90)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 137
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=94.30 E-value=0.17 Score=51.78 Aligned_cols=83 Identities=10% Similarity=0.110 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCcee-----eeecCCcchHHHHHHHHHHH
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKV-----FNLTGMGCSASLISVDIVRS 180 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~-----~~l~~~gCs~~~~al~~A~~ 180 (465)
....+..+++++|+++|++++|||.+++.. +.+.+-..+.++||++++-.. -++.++++++-..+|..+..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq----~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQ----PNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCC----CChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 445566899999999999999999998764 233355668999999853222 15667788888888876654
Q ss_pred HHhcCCCCEEEEEE
Q 039047 181 VFKTYKNMNAMVVT 194 (465)
Q Consensus 181 ll~~g~~~~aLVV~ 194 (465)
.++ +.+++|+++
T Consensus 282 ~~~--~Gd~vll~~ 293 (345)
T TIGR00748 282 IAE--PGDRILAVS 293 (345)
T ss_pred hcC--CCCEEEEEE
Confidence 322 345555543
No 138
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.78 E-value=0.32 Score=50.49 Aligned_cols=89 Identities=11% Similarity=0.204 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHc-----CCCCCce---eeeecCCcchHHHHHHHH
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRY-----KMRKDIK---VFNLTGMGCSASLISVDI 177 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~l-----gl~~~~~---~~~l~~~gCs~~~~al~~ 177 (465)
..+....+++++|+++|++++|||.++... ..+.+-..+.++| |++++-. .-.+.+++|++...+|..
T Consensus 270 ~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq----~n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~ 345 (378)
T PRK06816 270 IVVYTIKPLLELVDKRNLDPDDIDYFLPHY----SSEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDE 345 (378)
T ss_pred hHHHHHHHHHHHHHHcCCChhhCCEEeeCc----ccHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHH
Confidence 345568889999999999999999998754 2334456667766 7874321 225556677777788866
Q ss_pred HHHHHhcCCCCEEEEEEecCC
Q 039047 178 VRSVFKTYKNMNAMVVTSESL 198 (465)
Q Consensus 178 A~~ll~~g~~~~aLVV~~E~~ 198 (465)
+..-=+-.+++++++++.+..
T Consensus 346 a~~~g~~~~Gd~vl~~~~~s~ 366 (378)
T PRK06816 346 LLNSGRLKPGQKILCFVPESG 366 (378)
T ss_pred HHHcCCCCCCCEEEEEEeccc
Confidence 633111234688888888763
No 139
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=93.54 E-value=0.23 Score=52.18 Aligned_cols=91 Identities=15% Similarity=0.336 Sum_probs=62.8
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCC--------cchHHHHHHHHHHHHH
Q 039047 111 EDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGM--------GCSASLISVDIVRSVF 182 (465)
Q Consensus 111 ~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~--------gCs~~~~al~~A~~ll 182 (465)
..|++++|+++|++++|||.+.++- ..........+.+|++. ..++++|- |++|....+.+..++.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~e----aFa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINE----AFAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEch----HHHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 4799999999999999999987652 12244457778888863 45666653 6777777777777776
Q ss_pred hcCCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEec
Q 039047 183 KTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSN 228 (465)
Q Consensus 183 ~~g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~ 228 (465)
+.+ .++.|+ ..|..|-.+.|+||++
T Consensus 392 ~~g-~~~Gl~--------------------~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGLV--------------------TMCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEEE--------------------EEEeeccceeEEEEEe
Confidence 654 344422 2355666677888775
No 140
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.44 E-value=0.28 Score=49.73 Aligned_cols=90 Identities=13% Similarity=0.122 Sum_probs=58.8
Q ss_pred hhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeee---ecCCcchHHHHHHHHHHH
Q 039047 104 DEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFN---LTGMGCSASLISVDIVRS 180 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~---l~~~gCs~~~~al~~A~~ 180 (465)
++....+.++++++|+++|++++|||.+++.. ..+..-..+.+++|++++-...+ ..++++++...+|..+.+
T Consensus 235 ~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~----~~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~~~ 310 (338)
T PRK09258 235 KEGVELAVDTWEAFLAQLGWAVEQVDRVICHQ----VGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMAAE 310 (338)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEecCC----CCHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHHHH
Confidence 44556677889999999999999999988754 23345568899999985332222 445566666666654432
Q ss_pred HHhcCCCCEEEEEEecC
Q 039047 181 VFKTYKNMNAMVVTSES 197 (465)
Q Consensus 181 ll~~g~~~~aLVV~~E~ 197 (465)
-=+..+.+++|+++...
T Consensus 311 ~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 311 EGFLKPGDRVALLGIGS 327 (338)
T ss_pred hCCCCCCCEEEEEEech
Confidence 10012467788877654
No 141
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=93.34 E-value=1.6 Score=41.90 Aligned_cols=116 Identities=11% Similarity=0.001 Sum_probs=77.9
Q ss_pred hhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCC----------------CCCC---------hHHHHHHHHcCCCCCc
Q 039047 104 DEMEEFFEDSIAKILDRSGISPKEIDILVVNISMI----------------AIMP---------SLSSRIINRYKMRKDI 158 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~----------------~~~P---------s~a~~i~~~lgl~~~~ 158 (465)
.....|++.++.+++++. .++|.+|+++..+ ...| ..+..+.-..|. ..
T Consensus 32 s~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~ 105 (218)
T PF13723_consen 32 SRLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TG 105 (218)
T ss_pred CHHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CC
Confidence 356688899999988652 5677888876432 1233 123344444454 35
Q ss_pred eeeeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCc
Q 039047 159 KVFNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 159 ~~~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~ 231 (465)
+...+.. |=.++-.||.-|..+++.+ .+.||||+.|-..+..|.....+ .....--|.|++|++...
T Consensus 106 ~~tal~a-~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~----~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 106 PNTALAA-GEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPE----RDPPFPYALALVLSPGDS 172 (218)
T ss_pred ceEEEec-CcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcccc----cCCCcCEEEEEEecCCCC
Confidence 7788885 8889999999999999999 89999999999776544432111 112234577788876554
No 142
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=93.16 E-value=0.26 Score=49.79 Aligned_cols=85 Identities=7% Similarity=0.155 Sum_probs=56.5
Q ss_pred hhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCcee---eeecCCcchHHHHHHHHHHH
Q 039047 104 DEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKV---FNLTGMGCSASLISVDIVRS 180 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~---~~l~~~gCs~~~~al~~A~~ 180 (465)
+.+.+...++++++|+++|++++|||.++... ..+.+-..+.++||++++... -+..++++++-..+|..+
T Consensus 223 ~~~~~~~~~~~~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~-- 296 (326)
T PRK05963 223 TEAVRMMSGASQNVLASAAMTPQDIDRFFPHQ----ANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLA-- 296 (326)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHH--
Confidence 44566677889999999999999999988743 234566778999999854322 123334555555555433
Q ss_pred HHhcC---CCCEEEEEEe
Q 039047 181 VFKTY---KNMNAMVVTS 195 (465)
Q Consensus 181 ll~~g---~~~~aLVV~~ 195 (465)
++.+ +.+++|+++.
T Consensus 297 -~~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 297 -NLEQPLREGERLLFAAA 313 (326)
T ss_pred -HHhCCCCCCCEEEEEEE
Confidence 3332 4577777765
No 143
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.44 E-value=0.48 Score=47.91 Aligned_cols=84 Identities=13% Similarity=0.168 Sum_probs=53.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceee---eecCCcchHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVF---NLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~---~l~~~gCs~~~~al~~A~~l 181 (465)
.+.....++++++|+++|++++|||.++.... ....-..++++||++++.... ...+++|++...+|. .+
T Consensus 227 ~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~----~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~---~~ 299 (329)
T PRK07204 227 LSSKYLMKFIDKLLMDAGYTLADIDLIVPHQA----SGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALF---EA 299 (329)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHH---HH
Confidence 34555678899999999999999999987542 112456889999998543332 233334444444444 34
Q ss_pred HhcC---CCCEEEEEEe
Q 039047 182 FKTY---KNMNAMVVTS 195 (465)
Q Consensus 182 l~~g---~~~~aLVV~~ 195 (465)
++.+ +.+++|+++.
T Consensus 300 ~~~g~~~~Gd~vll~~~ 316 (329)
T PRK07204 300 IKQKKVQRGNKILLLGT 316 (329)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4443 3566666654
No 144
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.90 E-value=0.59 Score=47.06 Aligned_cols=83 Identities=6% Similarity=0.129 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCcee---eeecCCcchHHHHHHHHHHHHH
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKV---FNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~---~~l~~~gCs~~~~al~~A~~ll 182 (465)
+.+...++++++|+++|++++|||.+++.. ..+.+-..+.+++|++.+... -+..+++|++...+|. .++
T Consensus 223 ~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~---~~~ 295 (325)
T PRK12879 223 AVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALD---LAL 295 (325)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHH---HHH
Confidence 344556788999999999999999998763 234556788999999753222 2334444555555554 334
Q ss_pred hcC---CCCEEEEEEe
Q 039047 183 KTY---KNMNAMVVTS 195 (465)
Q Consensus 183 ~~g---~~~~aLVV~~ 195 (465)
+.+ +.+++|+++.
T Consensus 296 ~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 296 EQGKIKPGDTLLLYGF 311 (325)
T ss_pred HcCCCCCCCEEEEEEE
Confidence 543 3566766654
No 145
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=91.81 E-value=0.55 Score=47.16 Aligned_cols=84 Identities=14% Similarity=0.210 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeee---ecCCcchHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFN---LTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~---l~~~gCs~~~~al~~A~~l 181 (465)
...+...++++++|+++|++++|||.+++.. ..+..-..++++||++.+-...+ ..+++|++-+.+|..+
T Consensus 216 ~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~--- 288 (318)
T TIGR00747 216 HAVRKMGDVVEETLEANGLDPEDIDWFVPHQ----ANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDEL--- 288 (318)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHH---
Confidence 4445567789999999999999999998754 24456678899999985322122 2344555656666443
Q ss_pred HhcC---CCCEEEEEEe
Q 039047 182 FKTY---KNMNAMVVTS 195 (465)
Q Consensus 182 l~~g---~~~~aLVV~~ 195 (465)
++.+ +.+++|+++.
T Consensus 289 ~~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 289 LRTGRIKPGDLLLLVAF 305 (318)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3333 3566776654
No 146
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=91.62 E-value=0.62 Score=48.66 Aligned_cols=91 Identities=13% Similarity=0.038 Sum_probs=55.6
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEE
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMI 399 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~ 399 (465)
+++|+. .+|||.+=+|-.-....-...+.||+.++.+.++ --.--+||...++=...+.++...=+-+.|++.+..
T Consensus 302 ~~agl~---~~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~-GG~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~ 377 (393)
T PRK08235 302 EKTGKT---VEDIDLFEINEAFAAVALASTEIAGIDPEKVNVN-GGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAA 377 (393)
T ss_pred HHhCCC---HHHCCeehhcchhHHHHHHHHHHhCCCcccCCcC-CchHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 347777 4899999998776666667788999988777542 223457888777655555544432121355665543
Q ss_pred eeCchhhhheeeeEE
Q 039047 400 SFGAGFKCNSCVWEV 414 (465)
Q Consensus 400 sfGaG~~~~~~v~~~ 414 (465)
....|-.-.+++||.
T Consensus 378 ~c~~gG~g~a~~~e~ 392 (393)
T PRK08235 378 ICSGGGQGDAVLIEV 392 (393)
T ss_pred EcccccceEEEEEEe
Confidence 333333455666653
No 147
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=91.45 E-value=0.85 Score=45.80 Aligned_cols=78 Identities=13% Similarity=0.056 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEee-cCCCCCChHHHHHHHHcCCC---CCceeeeecCCcchHHHHHHHHHHHHHh
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNI-SMIAIMPSLSSRIINRYKMR---KDIKVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~-s~~~~~Ps~a~~i~~~lgl~---~~~~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
+-..++++++|+++|++++|||.++... +......-........++.+ .....-.+.++++++++..|..+...++
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~ 284 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLE 284 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHh
Confidence 4456799999999999999999999753 32222222233334444431 0112235566778888888888877776
Q ss_pred cC
Q 039047 184 TY 185 (465)
Q Consensus 184 ~g 185 (465)
.+
T Consensus 285 ~~ 286 (332)
T cd00825 285 HG 286 (332)
T ss_pred cC
Confidence 55
No 148
>PRK04262 hypothetical protein; Provisional
Probab=91.32 E-value=0.51 Score=48.27 Aligned_cols=68 Identities=12% Similarity=0.186 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCcee-----eeecCCcchHHHHHHHHHH
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKV-----FNLTGMGCSASLISVDIVR 179 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~-----~~l~~~gCs~~~~al~~A~ 179 (465)
....++++++|+++|++++|||.+++.. ..+.+-..++++||++++-.. -...++++++-..+|..+.
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~ 281 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQ----PNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVL 281 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCC----CchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHH
Confidence 4567789999999999999999988763 233455678899999854222 1455566666666665554
No 149
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=91.27 E-value=0.57 Score=49.19 Aligned_cols=91 Identities=12% Similarity=-0.039 Sum_probs=56.0
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEE
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMI 399 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~ 399 (465)
+++|+. .+|||.+=+|-.-....-...+.||+.++.+.++ -..--+||...++-...+.++...=+-++|...+..
T Consensus 314 ~~Agi~---~~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~-GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~~~ 389 (406)
T PRK07851 314 ARAGMS---IDDIDLVEINEAFAAQVLPSARELGIDEDKLNVS-GGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLET 389 (406)
T ss_pred HHhCCC---HHHCCeehhhhHHHHHHHHHHHHhCCCccccCCC-CChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 346777 4899999888665444444568889877666432 234457998887777666665543222445555555
Q ss_pred eeCchhhhheeeeEE
Q 039047 400 SFGAGFKCNSCVWEV 414 (465)
Q Consensus 400 sfGaG~~~~~~v~~~ 414 (465)
.-++|-.-.+++++.
T Consensus 390 ~~~~gg~g~a~~~e~ 404 (406)
T PRK07851 390 MCVGGGQGMAMVLER 404 (406)
T ss_pred EccccChhhEEEEEe
Confidence 445555555666664
No 150
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=91.24 E-value=0.69 Score=46.80 Aligned_cols=81 Identities=15% Similarity=0.146 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeee---ecCCcchHHHHHHHHHHHHHhc
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFN---LTGMGCSASLISVDIVRSVFKT 184 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~---l~~~gCs~~~~al~~A~~ll~~ 184 (465)
.....+++++|+++|++++|||.+++... .+..-..+.++||++++-...+ ..+++|++-..+|..+ ++.
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~----~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~~~ 298 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQA----NKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---IQN 298 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---HHh
Confidence 44566789999999999999999987642 2345567899999985422222 3344555555555444 343
Q ss_pred C---CCCEEEEEEe
Q 039047 185 Y---KNMNAMVVTS 195 (465)
Q Consensus 185 g---~~~~aLVV~~ 195 (465)
+ +.+++|+++.
T Consensus 299 g~~~~Gd~vll~~~ 312 (326)
T CHL00203 299 NKIQPGQIIVLSGF 312 (326)
T ss_pred CCCCCCCEEEEEEE
Confidence 3 3567776654
No 151
>PRK06840 hypothetical protein; Validated
Probab=90.96 E-value=0.82 Score=46.43 Aligned_cols=81 Identities=17% Similarity=0.288 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCc-eee-eecCCcchHHHHHHHHHHHHHhcC
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDI-KVF-NLTGMGCSASLISVDIVRSVFKTY 185 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~-~~~-~l~~~gCs~~~~al~~A~~ll~~g 185 (465)
....++++++|+++|++++|||.++... ..+.+-..+.++||++++- ..+ +..++++++...+|.. +++++
T Consensus 237 ~~~~~~i~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~---~~~~~ 309 (339)
T PRK06840 237 PNFLKVIREALRKSGYTPKDIDYLAILH----MKRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHL---ALEQG 309 (339)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC----cCHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHH---HHHcC
Confidence 3456899999999999999999987643 1234446789999998532 111 3344455555555543 34443
Q ss_pred ---CCCEEEEEEe
Q 039047 186 ---KNMNAMVVTS 195 (465)
Q Consensus 186 ---~~~~aLVV~~ 195 (465)
+.+++|+++.
T Consensus 310 ~~~~Gd~ill~~~ 322 (339)
T PRK06840 310 KLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCEEEEEEE
Confidence 3566666654
No 152
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=90.74 E-value=0.68 Score=48.53 Aligned_cols=86 Identities=16% Similarity=0.084 Sum_probs=48.6
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCc--ccchhHHHHHhhhccccccH---HHHHHHHHHHcCCCCCCC
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTE--YDLEPARMTLHRFGNTSAAS---LWYVLAYMEAKKRLKKGD 394 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~--e~~~~s~~~l~~~GNtssas---i~~~L~~~~~~g~l~~Gd 394 (465)
+++|+. .+|||++-+|-.-....-...+.||+.+ +.+.++-- +--+||...++ ..+.+.+.++. +.|.
T Consensus 307 ~~Agl~---~~DID~~ei~D~f~~~~l~~~e~lG~~~~~~pvN~~GG-~la~GHp~gasG~~~~~e~~~qLr~---~~~~ 379 (400)
T TIGR02430 307 ARAGLS---IDQFDVIELNEAFAAQALAVLRELGLADDDARVNPNGG-AIALGHPLGASGARLVLTALRQLER---SGGR 379 (400)
T ss_pred HHhCCC---HHHCCCcccCcHHHHHHHHHHHHcCCCCCCCeECCCCc-hHhccChHHHHHHHHHHHHHHHHHh---cCCC
Confidence 347777 4899999999776666667788899854 44432111 22378887664 33444444431 2344
Q ss_pred EEEEE-eeCchhhhheeeeE
Q 039047 395 RVLMI-SFGAGFKCNSCVWE 413 (465)
Q Consensus 395 ~vl~~-sfGaG~~~~~~v~~ 413 (465)
..+.. ..|.|. -.+++++
T Consensus 380 ~g~~~~c~~gG~-g~a~~~e 398 (400)
T TIGR02430 380 YALCTMCIGVGQ-GIALAIE 398 (400)
T ss_pred EEEEEEccccCh-hhEEEEE
Confidence 43333 344444 3445555
No 153
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=90.69 E-value=0.7 Score=47.95 Aligned_cols=84 Identities=12% Similarity=0.162 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCcee---eeecCCcchHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKV---FNLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~---~~l~~~gCs~~~~al~~A~~l 181 (465)
.+.....++++++|+++|++++|||.++.... -+.+-..++++||++++... -+..++++++-..+|..+
T Consensus 277 ~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~--- 349 (379)
T PLN02326 277 FAVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEA--- 349 (379)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHH---
Confidence 33445567889999999999999999887542 23344668999999864222 244555666666666544
Q ss_pred HhcC---CCCEEEEEEe
Q 039047 182 FKTY---KNMNAMVVTS 195 (465)
Q Consensus 182 l~~g---~~~~aLVV~~ 195 (465)
++.+ +.+++|+++.
T Consensus 350 ~~~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 350 VRSGKVKKGDVIATAGF 366 (379)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3333 3566666654
No 154
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=90.47 E-value=0.82 Score=45.74 Aligned_cols=85 Identities=15% Similarity=0.252 Sum_probs=55.9
Q ss_pred hhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeee---ecCCcchHHHHHHHHHHH
Q 039047 104 DEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFN---LTGMGCSASLISVDIVRS 180 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~---l~~~gCs~~~~al~~A~~ 180 (465)
+...+...++++++|+++|++++|||.++... ..+..-..+.+++|++++-.... ..++++++...+|..+
T Consensus 219 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~-- 292 (320)
T cd00830 219 KFAVRLMPESIEEALEKAGLTPDDIDWFVPHQ----ANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEA-- 292 (320)
T ss_pred HHHHHhhHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHH--
Confidence 34456677899999999999999999988754 23445567899999974322222 2334455555555433
Q ss_pred HHhcC---CCCEEEEEEe
Q 039047 181 VFKTY---KNMNAMVVTS 195 (465)
Q Consensus 181 ll~~g---~~~~aLVV~~ 195 (465)
++.+ +.+++|+++.
T Consensus 293 -~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 -IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 3333 4678888765
No 155
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=90.42 E-value=0.71 Score=48.42 Aligned_cols=63 Identities=13% Similarity=-0.003 Sum_probs=41.0
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCc--ccchhHHHHHhhhccccccH---HHHHHHHHHH
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTE--YDLEPARMTLHRFGNTSAAS---LWYVLAYMEA 386 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~--e~~~~s~~~l~~~GNtssas---i~~~L~~~~~ 386 (465)
+++|+.| +|||.+-+|-.-....-...+.||+.+ ..+.++-- +--+||...++ ..+.+.+.++
T Consensus 308 ~~Agl~~---~DId~~ei~D~f~~~~l~~~e~lg~~~~~~pvN~~GG-~la~Ghp~gasG~~~~~e~~~qLr 375 (401)
T PRK09050 308 ARLGLTI---DQFDVIELNEAFAAQGLAVLRQLGLADDDARVNPNGG-AIALGHPLGMSGARLVLTALHQLE 375 (401)
T ss_pred HHcCCCH---HHCCccccCcHhHHHHHHHHHHcCCCCCCCCEeCCCc-hHhcCCchhHHHHHHHHHHHHHHH
Confidence 3477874 899999999776555556788999954 34432111 12379998888 5555555554
No 156
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=90.05 E-value=0.9 Score=47.61 Aligned_cols=91 Identities=11% Similarity=-0.078 Sum_probs=49.8
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCC--cccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEE
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLT--EYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVL 397 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~--~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl 397 (465)
+++|+.| +|||++-+|-.-....-...+.||+. ...+.++-- +--+||...++=...+.++..+=+-+.|.+.+
T Consensus 307 ~~AGl~~---~DID~iei~dafa~~~l~~~e~lg~~~~~~pvN~~GG-~la~GHp~gasG~~~v~e~~~qL~~~~~~~g~ 382 (400)
T PRK13359 307 ARLGMTL---DQFDVIELNEAFASQGLAVLRELGLADDDARVNPNGG-AIALGHPLGASGARLVTTALYQLERTGGRFAL 382 (400)
T ss_pred HHhCCCH---HHcCcCccCcHhHHHHHHHHHHcCCCCCCCCEECCCc-hhhcCCchhHHHHHHHHHHHHHHhhcCCCeEE
Confidence 3477874 89999999977666666677889984 344532111 12378887555554444433321212344443
Q ss_pred EEeeCchhhhheeeeEE
Q 039047 398 MISFGAGFKCNSCVWEV 414 (465)
Q Consensus 398 ~~sfGaG~~~~~~v~~~ 414 (465)
...-+.|-.-.+++++.
T Consensus 383 ~~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 383 CTMCIGVGQGIAIAIER 399 (400)
T ss_pred EEEcccCCceeEEEEEe
Confidence 33333333344556553
No 157
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=89.96 E-value=1.2 Score=46.65 Aligned_cols=92 Identities=13% Similarity=0.015 Sum_probs=52.1
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCcc---cchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEE
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEY---DLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRV 396 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e---~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~v 396 (465)
+++|+.| +|||.+-+|-.-....-...+.||+.++ ++.++ -..--+||...++=...+.++..+=+-+.|.+.
T Consensus 309 ~~Agl~~---~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~-GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~g 384 (404)
T PRK06205 309 ARAGLTL---DDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVN-GSGISLGHPVGATGGRILATLLRELQRRQARYG 384 (404)
T ss_pred HHcCCCH---HHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCC-CCHHhhCCChhhhHHHHHHHHHHHHHhcCCCeE
Confidence 3477874 8999999997766666667788998763 44331 123447888766544444433321111233444
Q ss_pred EEEeeCchhhhheeeeEEE
Q 039047 397 LMISFGAGFKCNSCVWEVV 415 (465)
Q Consensus 397 l~~sfGaG~~~~~~v~~~~ 415 (465)
+...-++|-.-.+++++.+
T Consensus 385 l~~~c~~gg~g~a~~~e~~ 403 (404)
T PRK06205 385 LETMCIGGGQGLAAVFERV 403 (404)
T ss_pred EEEEeccCChhhEEEEEec
Confidence 4443333444456666653
No 158
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.75 E-value=1.2 Score=44.59 Aligned_cols=84 Identities=11% Similarity=0.142 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceee---eecCCcchHHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVF---NLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~---~l~~~gCs~~~~al~~A~~l 181 (465)
.......++++++|+++|++++|||.++... ..+..-..+.+++|++.+-... +..+++|+..+..|. .+
T Consensus 216 ~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~---~~ 288 (319)
T PRK09352 216 FAVRELAKVAREALEAAGLTPEDIDWLVPHQ----ANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALD---EA 288 (319)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHH---HH
Confidence 3445567789999999999999999998753 2345557788999998532221 233344555555553 33
Q ss_pred HhcC---CCCEEEEEEe
Q 039047 182 FKTY---KNMNAMVVTS 195 (465)
Q Consensus 182 l~~g---~~~~aLVV~~ 195 (465)
++.+ +.+++|+++.
T Consensus 289 ~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 289 VRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3433 3566776655
No 159
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.65 E-value=1.3 Score=45.83 Aligned_cols=86 Identities=9% Similarity=0.130 Sum_probs=55.9
Q ss_pred hhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHH-cCCCCC-c----eeeeecCCcchHHHHHHHH
Q 039047 104 DEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINR-YKMRKD-I----KVFNLTGMGCSASLISVDI 177 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~-lgl~~~-~----~~~~l~~~gCs~~~~al~~ 177 (465)
+++.+.+.++++++|+++|++++|||.++.... .+.+-..+.++ +|+... - ..-...+++|++-..+|..
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~----~~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQA----NINMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 456677889999999999999999999987532 11233334555 564321 1 1224556778888888877
Q ss_pred HHHHHhcCCCCEEEEEEe
Q 039047 178 VRSVFKTYKNMNAMVVTS 195 (465)
Q Consensus 178 A~~ll~~g~~~~aLVV~~ 195 (465)
+..-+ .+.+++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 65433 34577777664
No 160
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=89.24 E-value=2.8 Score=44.29 Aligned_cols=91 Identities=14% Similarity=-0.008 Sum_probs=52.0
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCC-----------------CCcccchhHHHHHhhhccccccHHHHHHH
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLD-----------------LTEYDLEPARMTLHRFGNTSAASLWYVLA 382 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lg-----------------l~~e~~~~s~~~l~~~GNtssasi~~~L~ 382 (465)
+++|+. .+|||.+-+|-.-....-...+.|+ ++.+.+.++= -+--+||...++=...+.
T Consensus 320 ~~AGl~---~~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~G-G~la~GhP~gasG~~~~~ 395 (428)
T PRK08963 320 ERAGLT---LADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLG-GSIAYGHPFAATGARMIT 395 (428)
T ss_pred HHcCCC---HHHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCC-CHHhcCCCccccHHHHHH
Confidence 357787 4899999999664433333333332 3333443311 123468877665555555
Q ss_pred HHHHcCCCCCCCEEEEEeeCchhhhheeeeEE
Q 039047 383 YMEAKKRLKKGDRVLMISFGAGFKCNSCVWEV 414 (465)
Q Consensus 383 ~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v~~~ 414 (465)
++..+=+=+.|++.+...-+.|-...+++++.
T Consensus 396 e~~~qLrg~~g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 396 QTLHELRRRGGGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred HHHHHHhhcCCCEEEEEEccccChhhEEEEEe
Confidence 44442222467777777666666667777764
No 161
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=89.23 E-value=1.9 Score=41.44 Aligned_cols=79 Identities=14% Similarity=0.073 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCCC---CCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKMR---KDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl~---~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
.+...++++++|+++|++++|||.++.. ..................+.. .....-.+.++++++++..|..+...+
T Consensus 144 ~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~ 223 (254)
T cd00327 144 GEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLML 223 (254)
T ss_pred hHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHH
Confidence 3556788999999999999999998875 322222222222222333331 011223445556777777776665555
Q ss_pred hcC
Q 039047 183 KTY 185 (465)
Q Consensus 183 ~~g 185 (465)
+.+
T Consensus 224 ~~~ 226 (254)
T cd00327 224 EHE 226 (254)
T ss_pred hCC
Confidence 544
No 162
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=88.17 E-value=1.2 Score=46.80 Aligned_cols=91 Identities=16% Similarity=0.350 Sum_probs=56.1
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC--------CcchHHHHHHHHHHHHH
Q 039047 111 EDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG--------MGCSASLISVDIVRSVF 182 (465)
Q Consensus 111 ~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~--------~gCs~~~~al~~A~~ll 182 (465)
..|++++|+++|++++|||++=++- ..+...-...+.||+.+ ..++++| .|++|....+.++.+|-
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~d----aFa~~~l~~~e~lG~~~--~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~ 376 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELNE----AFASVVLRFMQALDIPH--DKVNVNGGAIAMGHPLGATGAMILGTVLDELE 376 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecc----hhhHHHHHHHHHhCCCC--cCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999887542 23344455678888763 3556665 13334444444454443
Q ss_pred hcCCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEec
Q 039047 183 KTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSN 228 (465)
Q Consensus 183 ~~g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~ 228 (465)
+.+ .++.|+ +.|.=|-.+.|+||++
T Consensus 377 ~~~-~~~g~~--------------------~~c~ggG~g~a~~~e~ 401 (402)
T PRK08242 377 RRG-KRTALI--------------------TLCVGGGMGIATIIER 401 (402)
T ss_pred hcC-CCeEEE--------------------EEcccCCceeEEEEEe
Confidence 322 233322 2466677777888765
No 163
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=87.70 E-value=3.4 Score=43.09 Aligned_cols=88 Identities=13% Similarity=-0.013 Sum_probs=52.0
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCc---ccchhHHHHHhhhcccccc---HHHHHHHHHHHcCCCCCC
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTE---YDLEPARMTLHRFGNTSAA---SLWYVLAYMEAKKRLKKG 393 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~---e~~~~s~~~l~~~GNtssa---si~~~L~~~~~~g~l~~G 393 (465)
+++|+.| +|||.+=+|-.-....-...+.||+-+ +.+.++-- +--+||...| .+...|.+.+.+ +.+
T Consensus 291 ~~AGi~p---~DId~~Ei~daFa~~~l~~~e~lg~~~~g~~~vN~~GG-~la~GhP~GATG~r~v~~l~~~l~~---~~~ 363 (385)
T TIGR02445 291 KRAGLSI---SDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNGG-AIALGHPLGCSGARISTTLLNLMEQ---KDA 363 (385)
T ss_pred HHcCCCH---HHcCEEEEccccHHHHHHHHHHcCCCCCCCCCcCCCCc-hhhcCCCccccHHHHHHHHHHHHHh---cCC
Confidence 3467774 899999999777666667778999843 45554322 2335665433 344444444432 334
Q ss_pred CEEEEEeeCchhhhheeeeEE
Q 039047 394 DRVLMISFGAGFKCNSCVWEV 414 (465)
Q Consensus 394 d~vl~~sfGaG~~~~~~v~~~ 414 (465)
.+.+....|.|-.-.+++++.
T Consensus 364 ~~Gl~~~~~g~g~g~a~~~e~ 384 (385)
T TIGR02445 364 TFGLATMCIGLGQGIATVFER 384 (385)
T ss_pred CeEEEEEecccChhheEEEEe
Confidence 455555555555556666664
No 164
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=87.39 E-value=2.6 Score=44.01 Aligned_cols=87 Identities=14% Similarity=-0.020 Sum_probs=49.5
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCc---ccchhHHHHHhhhccccccHH---HHHHHHHHHcCCCCCC
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTE---YDLEPARMTLHRFGNTSAASL---WYVLAYMEAKKRLKKG 393 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~---e~~~~s~~~l~~~GNtssasi---~~~L~~~~~~g~l~~G 393 (465)
+++|+.| +|||.+=+|-.-....-...+.||+.+ +.+.++-- +--+||...++= ...|.+.++. +.+
T Consensus 293 ~~Agl~~---~DId~~El~d~F~~~~l~~~e~lg~~~~~~~~vN~~GG-~la~GhP~GAtG~~~v~~l~~~L~~---~~~ 365 (387)
T PRK08947 293 KRAGLSI---SDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLNGG-AIALGHPLGCSGARISTTLLNLMER---KDA 365 (387)
T ss_pred HHcCCCH---HHCCEEEecccchHHHHHHHHHcCCCCCCCCCcCCCCc-hhhcCCCccccHHHHHHHHHHHHHh---cCC
Confidence 3467774 899999999887777777788999844 45543211 234666654443 3333333332 333
Q ss_pred CEEEEEeeCchhhhheeeeE
Q 039047 394 DRVLMISFGAGFKCNSCVWE 413 (465)
Q Consensus 394 d~vl~~sfGaG~~~~~~v~~ 413 (465)
.+.+.-..|.|....+++++
T Consensus 366 ~~gl~~~~~g~G~g~a~~~e 385 (387)
T PRK08947 366 QFGLATMCIGLGQGIATVFE 385 (387)
T ss_pred CEEEEEEeecccceeEEEEE
Confidence 44444444433334445554
No 165
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=87.35 E-value=1.5 Score=45.08 Aligned_cols=87 Identities=10% Similarity=0.130 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCCCC-Cc----eeeeecCCcchHHHHHHHHHHHHHh
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKMRK-DI----KVFNLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl~~-~~----~~~~l~~~gCs~~~~al~~A~~ll~ 183 (465)
..++++++|+++|++|+|||.|+.. ++........+..+.+-+|-.. .. +.-.+...+.++|...+-.+...++
T Consensus 236 l~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~ 315 (348)
T PRK06147 236 LTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASR 315 (348)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999999864 3222212222333444444211 11 1122333344555555555555666
Q ss_pred cC--CCCEEEEEEec
Q 039047 184 TY--KNMNAMVVTSE 196 (465)
Q Consensus 184 ~g--~~~~aLVV~~E 196 (465)
.+ +..++||.++.
T Consensus 316 ~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 316 KGYGPGPNVLCHLSD 330 (348)
T ss_pred cCcCCCCcEEEEecC
Confidence 66 46778888764
No 166
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=87.34 E-value=1.9 Score=50.23 Aligned_cols=123 Identities=18% Similarity=0.258 Sum_probs=82.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcC----EEEEeec-CC-----CCCC----------hHHHHHHHHcC----CCCCcee
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEID----ILVVNIS-MI-----AIMP----------SLSSRIINRYK----MRKDIKV 160 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId----~li~~~s-~~-----~~~P----------s~a~~i~~~lg----l~~~~~~ 160 (465)
.-..|..++.-+|+-++||.|.+.. .+.+.|| +. ...| ..-+|.+||+. ++ -++
T Consensus 86 Pq~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfq--GPS 163 (2376)
T KOG1202|consen 86 PQLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQ--GPS 163 (2376)
T ss_pred HHHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEecc--CCc
Confidence 3357889999999999999998774 3444332 11 0111 23356666643 33 477
Q ss_pred eeecCCcchHHHHHHHHHHHHHhcCCCCEEEEEEecCCCC-C----CC-----C--CC----CccchhhhhhccccceEE
Q 039047 161 FNLTGMGCSASLISVDIVRSVFKTYKNMNAMVVTSESLSP-N----WY-----S--GN----DRSMILANCLFRSGGAVI 224 (465)
Q Consensus 161 ~~l~~~gCs~~~~al~~A~~ll~~g~~~~aLVV~~E~~s~-~----~~-----~--~~----dr~~~~~~~lfgDGaaA~ 224 (465)
|.+. .+|++.+.||+.|.+-++.|..+.++|-++-.+-. + |. . +. |.+- ...-=.||++|+
T Consensus 164 ~s~D-tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeag--nGY~Rseg~~av 240 (2376)
T KOG1202|consen 164 FSVD-TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAG--NGYCRSEGVVAV 240 (2376)
T ss_pred hhhh-hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccC--CceeecCceEEE
Confidence 7888 59999999999999999999999999998876432 1 11 1 11 1110 123447999999
Q ss_pred EEecCCcc
Q 039047 225 LLSNKRSL 232 (465)
Q Consensus 225 lLs~~~~~ 232 (465)
+|.+....
T Consensus 241 llqrk~~A 248 (2376)
T KOG1202|consen 241 LLQRKSLA 248 (2376)
T ss_pred EEehhHHH
Confidence 99987654
No 167
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=86.87 E-value=3.4 Score=43.09 Aligned_cols=93 Identities=15% Similarity=0.220 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC--------CcchHHHHHHHHHHH
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG--------MGCSASLISVDIVRS 180 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~--------~gCs~~~~al~~A~~ 180 (465)
-...|++++++++|++|+|||++=++- .++...-...+.||+.. ..+|.+| .||+|....++++.+
T Consensus 286 ~~~~a~~~al~~agl~~~did~~ei~d----~F~~~~l~~~e~lg~~~--~pvN~~GG~la~Ghp~gatG~~~v~e~~~q 359 (387)
T PRK07850 286 GPVQATAKVLEKAGMKIGDIDLVEINE----AFASVVLSWAQVHEPDM--DKVNVNGGAIALGHPVGSTGARLITTALHE 359 (387)
T ss_pred hHHHHHHHHHHHcCCCHHHcCeeeecc----cchHHHHHHHHHcCCCC--CCcCCCCchhhcCCCcchhHHHHHHHHHHH
Confidence 346899999999999999999887642 12333334457788753 3666665 123344444555555
Q ss_pred HHhcCCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEec
Q 039047 181 VFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSN 228 (465)
Q Consensus 181 ll~~g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~ 228 (465)
|-+.+ .++.|+ +.|.=|..++|+||++
T Consensus 360 L~~~~-~~~g~~--------------------~~c~~gg~g~a~~~e~ 386 (387)
T PRK07850 360 LERTD-KSTALI--------------------TMCAGGALSTGTIIER 386 (387)
T ss_pred HHhcC-CCeEEE--------------------EEccccCceeEEEEEe
Confidence 54432 334332 2355566677777764
No 168
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=86.54 E-value=2.9 Score=43.57 Aligned_cols=87 Identities=9% Similarity=0.001 Sum_probs=51.0
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccH---HHHHHHHHHHcCCCCCCCEE
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAAS---LWYVLAYMEAKKRLKKGDRV 396 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssas---i~~~L~~~~~~g~l~~Gd~v 396 (465)
+++|+. .+|||.+=+|-.-....-...+.||++.+++.++=-.+ -+||-..+| +.+.|.+.++. +.|...
T Consensus 296 ~~Agl~---~~DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG~l-a~GHP~GatG~~~~~~l~~qL~~---~~~~~g 368 (388)
T PRK06366 296 EKQNKS---IDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGGAV-AIGHPIGNSGSRIIVTLINALKT---RHMKTG 368 (388)
T ss_pred HHcCCC---HHHcceeeccchhHHHHHHHHHHhCCCCCccCCCCchh-hhCCCcCCCHHHHHHHHHHHHHh---cCCCeE
Confidence 347787 48999999997777777778899999987887642222 356654433 33344444432 122233
Q ss_pred -EEEeeCchhhhheeeeEE
Q 039047 397 -LMISFGAGFKCNSCVWEV 414 (465)
Q Consensus 397 -l~~sfGaG~~~~~~v~~~ 414 (465)
..+..|.|. -.+++++.
T Consensus 369 ~~~~c~~gg~-g~a~~~e~ 386 (388)
T PRK06366 369 LATLCHGGGG-AHTLTLEM 386 (388)
T ss_pred EEEEecccCh-hhEEEEEe
Confidence 333344443 45566654
No 169
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=86.36 E-value=1.3 Score=44.98 Aligned_cols=56 Identities=16% Similarity=0.296 Sum_probs=44.3
Q ss_pred hhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceee
Q 039047 102 GIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVF 161 (465)
Q Consensus 102 ~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~ 161 (465)
-.+.+..++.++++++|+++|++++|||.++... .-..+-..++++||++++-...
T Consensus 217 vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpHQ----an~ri~~~i~~~l~~~~~k~~~ 272 (323)
T COG0332 217 VFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPHQ----ANLRIIEAIAKKLGIPEEKVVV 272 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEcccc----ccHHHHHHHHHHcCCCHHHHhh
Confidence 4567889999999999999999999999998653 2335668889999997543333
No 170
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=85.47 E-value=3.1 Score=43.59 Aligned_cols=93 Identities=18% Similarity=0.281 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC--------CcchHHHHHHHHHHH
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG--------MGCSASLISVDIVRS 180 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~--------~gCs~~~~al~~A~~ 180 (465)
-...|+++||+++|++|+|||++-++- ......-...+.||+.. ..+|.+| .|++|....+.++.+
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~ei~D----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~GHp~gasG~~~~~~~~~~ 371 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIELNE----AFAAQSLAVIRDLGLDP--SKVNPLGGAIALGHPLGATGAIRTATVVHG 371 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEeCc----HHHHHHHHHHHHhCCCC--cccCCCCchhhcCchHHHHHHHHHHHHHHH
Confidence 346899999999999999999886431 12233444557788753 2344443 144444555555555
Q ss_pred HHhcCCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEec
Q 039047 181 VFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSN 228 (465)
Q Consensus 181 ll~~g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~ 228 (465)
|-..+ .++.|+ +.|.-|-.|.|+||++
T Consensus 372 L~~~~-~~~g~~--------------------~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 372 LRRTN-LKYGMV--------------------TMCVGTGMGAAGIFER 398 (399)
T ss_pred HHhcC-CCeEEE--------------------EEcccCCceeEEEEEe
Confidence 54432 233222 2355566677777764
No 171
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=85.45 E-value=3.9 Score=35.56 Aligned_cols=69 Identities=19% Similarity=0.401 Sum_probs=45.6
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC--------CcchHHHHHHHHHHHHH
Q 039047 111 EDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG--------MGCSASLISVDIVRSVF 182 (465)
Q Consensus 111 ~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~--------~gCs~~~~al~~A~~ll 182 (465)
..|++++|+++|++++|||.+=++-. +....-...+.+|+.+ ..+|.+| .||+|....+.++.+|-
T Consensus 25 ~~A~~~al~~ag~~~~did~~Ei~Ea----FA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~ 98 (123)
T PF02803_consen 25 VPAARKALERAGLTPDDIDVIEINEA----FAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQLR 98 (123)
T ss_dssp HHHHHHHHHHHT--GGGESEEEE--S----BHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCccccchhhccch----hhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHHH
Confidence 57999999999999999998877631 2344556677788763 4556554 25666677777777776
Q ss_pred hcC
Q 039047 183 KTY 185 (465)
Q Consensus 183 ~~g 185 (465)
+.+
T Consensus 99 ~~~ 101 (123)
T PF02803_consen 99 RRG 101 (123)
T ss_dssp HHT
T ss_pred Hhc
Confidence 544
No 172
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=85.44 E-value=3.3 Score=42.74 Aligned_cols=82 Identities=10% Similarity=0.181 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCC-----CCceee-eecCCcchHHHHHHHHHHH
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMR-----KDIKVF-NLTGMGCSASLISVDIVRS 180 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~-----~~~~~~-~l~~~gCs~~~~al~~A~~ 180 (465)
..-...|+++.+++.|++++|.|.+++.+ |.|-+....+..++.+ +..... .+.++.|++...+|--.-.
T Consensus 208 ~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~ 283 (377)
T COG3425 208 FKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLD 283 (377)
T ss_pred HHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHh
Confidence 45677899999999999999999999876 4555566666666665 333333 5788889988877633322
Q ss_pred HHhcCCCCEEEEE
Q 039047 181 VFKTYKNMNAMVV 193 (465)
Q Consensus 181 ll~~g~~~~aLVV 193 (465)
-.. .+.+++|++
T Consensus 284 ~a~-~~G~rIl~~ 295 (377)
T COG3425 284 NAK-LPGDRILLF 295 (377)
T ss_pred hcC-CCCCEEEEE
Confidence 222 145566554
No 173
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=84.94 E-value=2.8 Score=43.06 Aligned_cols=87 Identities=13% Similarity=0.136 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHHHHHc--CCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCc------eeeeecCCcchHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRS--GISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDI------KVFNLTGMGCSASLISVD 176 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~a--gi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~------~~~~l~~~gCs~~~~al~ 176 (465)
.+.....++++++|+++ |++++|||.+++... ...+-..+.++||++++- ..-+..++++++-..+|.
T Consensus 256 ~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~----~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~ 331 (361)
T cd00831 256 LVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPG----GRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLA 331 (361)
T ss_pred HHHHHHHHHHHHHhccccCCCccccceEEEECCC----ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHH
Confidence 44556777899999999 999999999887642 223446788999997532 123556667777777776
Q ss_pred HHHHHHhcCCCCEEEEEEe
Q 039047 177 IVRSVFKTYKNMNAMVVTS 195 (465)
Q Consensus 177 ~A~~ll~~g~~~~aLVV~~ 195 (465)
.+.+-=+..+.+++|+++.
T Consensus 332 ~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 332 YMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHhCCCCCCCEEEEEEE
Confidence 5543211124567777664
No 174
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=84.85 E-value=3.5 Score=42.95 Aligned_cols=61 Identities=10% Similarity=-0.056 Sum_probs=42.5
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCcc------------------cchhHHHHHhhhccccccHHHHHH
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEY------------------DLEPARMTLHRFGNTSAASLWYVL 381 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e------------------~~~~s~~~l~~~GNtssasi~~~L 381 (465)
+++|+.| +|||.+-+|-......-...+.||+.++ .+.++=- +--+||...+|=...+
T Consensus 271 ~~agl~~---~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG-~la~Ghp~gasG~~~~ 346 (389)
T PRK07516 271 AQAGVTL---DDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGG-LKAKGHPIGATGVSMH 346 (389)
T ss_pred HHcCCCH---HHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCC-cccCCCCccHHHHHHH
Confidence 3477874 8999999998877777778889998875 3322111 2358998877766666
Q ss_pred HHH
Q 039047 382 AYM 384 (465)
Q Consensus 382 ~~~ 384 (465)
.++
T Consensus 347 ~e~ 349 (389)
T PRK07516 347 VLA 349 (389)
T ss_pred HHH
Confidence 554
No 175
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=83.56 E-value=4 Score=42.82 Aligned_cols=60 Identities=13% Similarity=-0.002 Sum_probs=36.1
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCc--ccchhHHHHHhhhccccccHHHHHHHH
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTE--YDLEPARMTLHRFGNTSAASLWYVLAY 383 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~--e~~~~s~~~l~~~GNtssasi~~~L~~ 383 (465)
+++|+.| +|||.+=+|-.-....-...+.||+.. ..+.++- -+--+||...|+=...+.+
T Consensus 307 ~~agl~~---~did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~G-G~la~GhP~gAtG~~~~~e 368 (401)
T PRK08131 307 ARAGLTL---DDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPNG-GAIAVGHPLGASGARLALT 368 (401)
T ss_pred HHcCCCH---HHCCeehhccHHHHHHHHHHHHcCCCCCCCCccCCc-cHHhcCCchhhhHHHHHHH
Confidence 3477774 899999999665444444778899853 3443321 1234788865554433333
No 176
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=83.35 E-value=1.9 Score=45.15 Aligned_cols=92 Identities=14% Similarity=0.274 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC--------CcchHHHHHHHHHHHH
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG--------MGCSASLISVDIVRSV 181 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~--------~gCs~~~~al~~A~~l 181 (465)
...|++++|+++|++|+|||++=++- ......-.-.+.||+.. ..++++| .|++|....+.++.+|
T Consensus 297 ~~~a~~~al~~agl~~~Did~~ei~d----~fa~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL 370 (397)
T PRK06954 297 PVGAIRKLFEKNGWRAAEVDLFEINE----AFAVVTMAAMKEHGLPH--EKVNVNGGACALGHPIGASGARILVTLIGAL 370 (397)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEehhh----HHHHHHHHHHHHhCCCc--ccCCcCCChHHhcccHHHHHHHHHHHHHHHH
Confidence 46799999999999999999884321 11122223346788753 3556654 1334444445555555
Q ss_pred HhcCCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEec
Q 039047 182 FKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSN 228 (465)
Q Consensus 182 l~~g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~ 228 (465)
-..+ .++. +.+.|.=|-.++|+||++
T Consensus 371 ~~~~-g~~~--------------------v~~~c~~gg~g~a~~~e~ 396 (397)
T PRK06954 371 RARG-GKRG--------------------VASLCIGGGEATAMGIEL 396 (397)
T ss_pred HhcC-CCeE--------------------EEEEccccchhhEEEEEe
Confidence 3321 2222 223466666677777764
No 177
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=83.30 E-value=2.4 Score=36.87 Aligned_cols=89 Identities=17% Similarity=0.107 Sum_probs=50.1
Q ss_pred CcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCEEEEEe
Q 039047 321 EKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDRVLMIS 400 (465)
Q Consensus 321 ~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~s 400 (465)
++|++ .+|||.|=+|-.-....-...+.||++++++.++=-.+. +||-..+|=...+.++...-+-+.|++.+...
T Consensus 34 ~ag~~---~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la-~GHP~gasG~r~~~~l~~~L~~~~~~~gla~~ 109 (123)
T PF02803_consen 34 RAGLT---PDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALA-LGHPLGASGARLVVELAHQLRRRGGRYGLAAI 109 (123)
T ss_dssp HHT-----GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHH-H-BHTTTHHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HhCCC---ccccchhhccchhhhHHHHhhccccccccccCccccccc-ccccccccccchhhhhHHHHHHhchhhhhHHh
Confidence 46777 589999999988888888889999999999987433343 77775555333333322211112455555443
Q ss_pred eCchhhhheeeeE
Q 039047 401 FGAGFKCNSCVWE 413 (465)
Q Consensus 401 fGaG~~~~~~v~~ 413 (465)
-+.|-.-.++++|
T Consensus 110 ~~ggG~g~a~lle 122 (123)
T PF02803_consen 110 CAGGGQGSAVLLE 122 (123)
T ss_dssp EETTTEEEEEEEE
T ss_pred cccceeeEEEEEE
Confidence 3333334455554
No 178
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=83.18 E-value=2.5 Score=44.20 Aligned_cols=49 Identities=20% Similarity=0.279 Sum_probs=34.3
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC
Q 039047 111 EDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG 165 (465)
Q Consensus 111 ~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~ 165 (465)
..|++++|+++|++|+|||++-++- ..+...-...+.||+.. ..++++|
T Consensus 294 ~~a~~~al~~agl~~~dId~~e~~d----~f~~~~~~~~e~lg~~~--~~vn~~G 342 (393)
T PRK05656 294 VSATRRCLDKAGWSLAELDLIEANE----AFAAQSLAVGKELGWDA--AKVNVNG 342 (393)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecC----ccHHHHHHHHHHhCCCC--ccCCcCC
Confidence 5799999999999999999987642 13344455567788752 3345553
No 179
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=82.44 E-value=4.5 Score=43.71 Aligned_cols=77 Identities=14% Similarity=0.202 Sum_probs=50.1
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCCCCC-ceeeeecCCcchH--------HHHHHHHHHH
Q 039047 111 EDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKMRKD-IKVFNLTGMGCSA--------SLISVDIVRS 180 (465)
Q Consensus 111 ~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl~~~-~~~~~l~~~gCs~--------~~~al~~A~~ 180 (465)
..|++++++++|++++|||++=+. | +|...-+..+.||+.++ -..++++| |..+ ++..+--+..
T Consensus 295 ~~aa~~a~~~AGi~~~Did~~elydc-----F~~~~~~~~E~LGl~~~g~~pvN~sG-Gl~s~G~P~~a~g~~~i~E~v~ 368 (498)
T PRK08257 295 RAAGRRALALAGLGIDDIDAFDLYSC-----FPSAVQVAARELGLDLDDPRPLTVTG-GLPFFGGPGNNYVTHAIAEMVE 368 (498)
T ss_pred HHHHHHHHHHhCCCHHHCCEEEeccC-----CHHHHHHHHHHcCcCCCCCCCcCCCc-ChhhcCCchhhHHHHHHHHHHH
Confidence 469999999999999999988653 4 45555666788998753 23566665 4432 4555544444
Q ss_pred HHhcCCCCEEEEE
Q 039047 181 VFKTYKNMNAMVV 193 (465)
Q Consensus 181 ll~~g~~~~aLVV 193 (465)
.|+..+.+++||.
T Consensus 369 QLRg~~~~~gLv~ 381 (498)
T PRK08257 369 RLRANPGRRGLVT 381 (498)
T ss_pred HHhhcCCCEEEEE
Confidence 4554445555554
No 180
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=82.38 E-value=2.2 Score=44.58 Aligned_cols=93 Identities=18% Similarity=0.332 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC--------CcchHHHHHHHHHHH
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG--------MGCSASLISVDIVRS 180 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~--------~gCs~~~~al~~A~~ 180 (465)
-...|++++|+++|++|+|||++-++- ..+...-...+.||+.+ ..++.+| .|++|....+.++.+
T Consensus 290 ~~~~a~~~al~~agl~~~did~~ei~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~el~~q 363 (391)
T PRK07661 290 GPIAAIPKALKLAGLELSDIGLFELNE----AFASQSIQVIRELGLDE--EKVNVNGGAIALGHPLGCTGAKLTLSLIHE 363 (391)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeCC----HHHHHHHHHHHHcCCCC--CCCCCCCChHHhCCcHHHHHHHHHHHHHHH
Confidence 346799999999999999999887542 12233334446788752 2444443 244455555555555
Q ss_pred HHhcCCCCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEec
Q 039047 181 VFKTYKNMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSN 228 (465)
Q Consensus 181 ll~~g~~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~ 228 (465)
|-+.+ .++.|+ +.|.=|..+.|+|+++
T Consensus 364 L~~~~-~~~g~~--------------------~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 364 MKRRN-EQFGIV--------------------TMCIGGGMGAAGVFEL 390 (391)
T ss_pred HHhcC-CCeEEE--------------------EEccccChhhEEEEEe
Confidence 54433 233322 2455566677777764
No 181
>PRK09051 beta-ketothiolase; Provisional
Probab=81.96 E-value=6 Score=41.35 Aligned_cols=50 Identities=16% Similarity=0.300 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG 165 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~ 165 (465)
...|++++|+++|++|+|||++=++- ..+...-...+.||+.+ ..+|.+|
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~~--~~vN~~G 343 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLDP--AKVNPNG 343 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCCc--cccCCCc
Confidence 46799999999999999999886642 23344556668889863 4666665
No 182
>PLN02287 3-ketoacyl-CoA thiolase
Probab=81.76 E-value=3.3 Score=44.17 Aligned_cols=96 Identities=15% Similarity=0.233 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC--------CcchHHHHHHHHHHHH
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG--------MGCSASLISVDIVRSV 181 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~--------~gCs~~~~al~~A~~l 181 (465)
...|++++|+++|++|+|||++=++- ......-...+.||+.+ ..++++| .|++|....+.++.+|
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~d----aFa~~~l~~~e~lG~~~--~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL 406 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEINE----AFASQFVYCCKKLGLDP--EKVNVNGGAIALGHPLGATGARCVATLLHEM 406 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecc----hHHHHHHHHHHHcCCCc--cccCCCCcHHhccCcHHHHHHHHHHHHHHHH
Confidence 46899999999999999999885431 12222233456788753 3455544 2445555555555555
Q ss_pred HhcCC-CCEEEEEEecCCCCCCCCCCCccchhhhhhccccceEEEEecCCc
Q 039047 182 FKTYK-NMNAMVVTSESLSPNWYSGNDRSMILANCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 182 l~~g~-~~~aLVV~~E~~s~~~~~~~dr~~~~~~~lfgDGaaA~lLs~~~~ 231 (465)
-+.+. .++.| .+.|.=|--+.|+||++.+.
T Consensus 407 ~~~~~~~~~gl--------------------~~~c~ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 407 KRRGKDCRFGV--------------------VSMCIGTGMGAAAVFERGDS 437 (452)
T ss_pred HhcCCCCCeeE--------------------EEEccccCceeEEEEEecCc
Confidence 44321 02222 22466677788999988654
No 183
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=79.99 E-value=7.8 Score=40.22 Aligned_cols=34 Identities=15% Similarity=-0.055 Sum_probs=27.2
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCc
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTE 356 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~ 356 (465)
+++|+.| +|||.+-+|-.....--...+.||+.+
T Consensus 268 ~~Agi~~---~DiD~~ei~d~ft~~~l~~le~lGl~~ 301 (385)
T PRK12578 268 NMAKVTP---NDIEVATVHDAFTIAEIMGYEDLGFTE 301 (385)
T ss_pred HHcCCCH---HHCCEEEecCcChHHHHHHHHHcCCCC
Confidence 3477874 899999999877766666788999876
No 184
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=79.95 E-value=6 Score=40.91 Aligned_cols=70 Identities=14% Similarity=0.217 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC--------CcchHHHHHHHHHHH
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG--------MGCSASLISVDIVRS 180 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~--------~gCs~~~~al~~A~~ 180 (465)
-...|++++|+++|++++|||.+..+- ..........+.||+.. ..++.+| .|+++......+..+
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~e----afa~~~~~~~e~lgl~~--~~vn~~GG~la~Ghp~GatG~~~~~~~~~q 332 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINE----AFASKVVACAKELQIPY--EKLNVNGGAIALGHPYGASGAMLVTRLFYQ 332 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecc----hhHHHHHHHHHhcCCCc--hhcccCCcHHhccCchhhhHHHHHHHHHHH
Confidence 456799999999999999999987642 13344455667888863 3444442 366666666777766
Q ss_pred HHhc
Q 039047 181 VFKT 184 (465)
Q Consensus 181 ll~~ 184 (465)
+-+.
T Consensus 333 l~~~ 336 (361)
T PRK06690 333 AKRE 336 (361)
T ss_pred HHHh
Confidence 6554
No 185
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=79.85 E-value=7.5 Score=39.96 Aligned_cols=45 Identities=11% Similarity=0.149 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCC
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRK 156 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~ 156 (465)
.-...|++++|+++|++++|||++=+.- ..+...-...+.||+.+
T Consensus 251 ~~~~~a~~~al~~Agl~~~did~~ei~d----~F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 251 DAARLAARRAYKMAGITPDDIDVAELYD----CFTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecC----cChHHHHHHHHHcCCCC
Confidence 3445799999999999999999886642 13445566667788765
No 186
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=79.23 E-value=9.1 Score=40.56 Aligned_cols=19 Identities=16% Similarity=0.326 Sum_probs=15.8
Q ss_pred hhhhccccceEEEEecCCc
Q 039047 213 ANCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 213 ~~~lfgDGaaA~lLs~~~~ 231 (465)
..|.+.|||+|+||.+++.
T Consensus 265 ~~~~~~DGAaA~il~se~~ 283 (430)
T TIGR02446 265 NSTPLTDGAAAVILMREGR 283 (430)
T ss_pred hcCCCCCceEEEEEecHHH
Confidence 3678899999999998653
No 187
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=78.70 E-value=12 Score=39.07 Aligned_cols=83 Identities=16% Similarity=0.071 Sum_probs=50.2
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCcc------------------cchhHHHHHhhhccccccHHHHHH
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEY------------------DLEPARMTLHRFGNTSAASLWYVL 381 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e------------------~~~~s~~~l~~~GNtssasi~~~L 381 (465)
+++|+. .+|||.+-+|-.-....-...+.||+.+. .+.++= -+--+||...++=...+
T Consensus 287 ~~Agi~---~~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~G-G~la~Ghp~gatG~~~~ 362 (403)
T PRK06289 287 RRAGVG---LDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPSG-GLIGGGHPVGASGVRML 362 (403)
T ss_pred HHcCCC---HHHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCCC-CccccCCCccchHHHHH
Confidence 357787 48999999998877777778899998863 222110 01237887766555555
Q ss_pred HHHHHc--C-----CCCCCCEEEEEeeCchhh
Q 039047 382 AYMEAK--K-----RLKKGDRVLMISFGAGFK 406 (465)
Q Consensus 382 ~~~~~~--g-----~l~~Gd~vl~~sfGaG~~ 406 (465)
.++..+ | .++..+..+..+.|.|..
T Consensus 363 ~e~~~QLrg~ag~~Qv~~~~~~l~~~~gg~~~ 394 (403)
T PRK06289 363 LDAAKQVTGTAGDYQVEGAKTFGTLNIGGSTT 394 (403)
T ss_pred HHHHHHHhccccCccCCchheEEEEecCcccc
Confidence 544331 2 222334556666665543
No 188
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=78.59 E-value=6.3 Score=40.53 Aligned_cols=75 Identities=15% Similarity=0.080 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCcee---ee-ecCCcchHHHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKV---FN-LTGMGCSASLISVDIVRS 180 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~---~~-l~~~gCs~~~~al~~A~~ 180 (465)
.+....-.+++++|+++|++++|||.+++.. ..+.+-..+.++||++++-.. ++ ..+++.++...+|..+
T Consensus 239 ~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ----~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~-- 312 (353)
T PRK12880 239 MALECEPKSFKEILEFSKVDEKDIAFHLFHQ----SNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCEL-- 312 (353)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHH--
Confidence 4455566789999999999999999998864 234566789999999863221 12 3345555555555533
Q ss_pred HHhcCC
Q 039047 181 VFKTYK 186 (465)
Q Consensus 181 ll~~g~ 186 (465)
+..++
T Consensus 313 -~~~~~ 317 (353)
T PRK12880 313 -DTPKE 317 (353)
T ss_pred -HHcCC
Confidence 44454
No 189
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=78.35 E-value=8 Score=38.62 Aligned_cols=92 Identities=14% Similarity=0.173 Sum_probs=58.3
Q ss_pred hhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCC-Cce------eeeecCCcchHHHHH
Q 039047 102 GIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRK-DIK------VFNLTGMGCSASLIS 174 (465)
Q Consensus 102 ~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~-~~~------~~~l~~~gCs~~~~a 174 (465)
..+.+.+....+++++|+++|++ +|||.++...... +..-..+.++++++. ++. .-+..+++|++...+
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~ 292 (324)
T cd00827 217 VFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQPNG---KKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILLG 292 (324)
T ss_pred hHHHHhHHHHHHHHHHHHHcccc-cccceeeccCchH---HHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHHH
Confidence 34566778889999999999999 9999887653211 156678888998742 111 233445566666666
Q ss_pred HHHHHHHHhcCCCCEEEEEEecC
Q 039047 175 VDIVRSVFKTYKNMNAMVVTSES 197 (465)
Q Consensus 175 l~~A~~ll~~g~~~~aLVV~~E~ 197 (465)
|..+..--+..+.+++|+++.-.
T Consensus 293 L~~~~~~~~~~~Gd~vl~~~~G~ 315 (324)
T cd00827 293 LASLLESGKLKAGDRVLLFSYGS 315 (324)
T ss_pred HHHHHhcCCCCCCCEEEEEEecc
Confidence 65443211122467888877644
No 190
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=78.12 E-value=8 Score=40.15 Aligned_cols=42 Identities=19% Similarity=0.346 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMR 155 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~ 155 (465)
...|++++++++|++|+|||.+-..- ..+.......+.||+.
T Consensus 287 ~~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~~~~~e~lg~~ 328 (386)
T cd00751 287 PVPAIPKALKRAGLTLDDIDLIEINE----AFAAQALACLKELGLD 328 (386)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeec----hhHHHHHHHHHHhCCC
Confidence 45799999999999999999886531 1122334455778875
No 191
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=78.10 E-value=6.8 Score=37.55 Aligned_cols=58 Identities=14% Similarity=0.244 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-hHHHHHHHHcCCCCCceeeeecC
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNISMIAIMP-SLSSRIINRYKMRKDIKVFNLTG 165 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~P-s~a~~i~~~lgl~~~~~~~~l~~ 165 (465)
+....+++++|.++|++..|||.|+|++.|+..+- -++.-+++-|.+..+++.+.++.
T Consensus 39 e~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss 97 (220)
T COG1214 39 ERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS 97 (220)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH
Confidence 55677899999999999999999999987665443 24555555566555678888884
No 192
>PLN03169 chalcone synthase family protein; Provisional
Probab=78.08 E-value=8.8 Score=40.08 Aligned_cols=87 Identities=13% Similarity=0.210 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCcee------eeecCCcchHHHHHHHHHHH
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKV------FNLTGMGCSASLISVDIVRS 180 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~------~~l~~~gCs~~~~al~~A~~ 180 (465)
..-...+++++|+++|++++|||.+.+..-+. ...+-..++++||++++... -+..++++++-..+|+.+..
T Consensus 280 ~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~--n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~ 357 (391)
T PLN03169 280 EDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPG--GPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMRE 357 (391)
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCcceEEecCC--CHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHH
Confidence 34445567899999999999999443332111 24567788999999854322 36667788888888876542
Q ss_pred H--Hh-cCCCCEEEEEEe
Q 039047 181 V--FK-TYKNMNAMVVTS 195 (465)
Q Consensus 181 l--l~-~g~~~~aLVV~~ 195 (465)
- ++ ..+.+++|+++.
T Consensus 358 ~~~~~~~~~gd~~ll~af 375 (391)
T PLN03169 358 ELKKKGEEDEEWGLILAF 375 (391)
T ss_pred hhcccCCCCCcEEEEEEE
Confidence 2 21 113466666553
No 193
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=77.09 E-value=11 Score=39.37 Aligned_cols=67 Identities=21% Similarity=0.342 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC--------CcchHHHHHHHHHHHH
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG--------MGCSASLISVDIVRSV 181 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~--------~gCs~~~~al~~A~~l 181 (465)
...|++++|+++|++|+|||++=+.- ..+...-...+.||+.+ +.+|.+| .||+|...-+.++.+|
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDP--ETVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCc--cccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 46799999999999999999886542 23445556677888763 3455554 2555555666666666
Q ss_pred H
Q 039047 182 F 182 (465)
Q Consensus 182 l 182 (465)
-
T Consensus 368 ~ 368 (394)
T PRK06445 368 Q 368 (394)
T ss_pred H
Confidence 4
No 194
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=76.62 E-value=1 Score=38.53 Aligned_cols=76 Identities=17% Similarity=0.200 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCCCC---Cceee----eecCCcchHHHHHHHHHHHH
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKMRK---DIKVF----NLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl~~---~~~~~----~l~~~gCs~~~~al~~A~~l 181 (465)
..++++++|+++|++|+|||.|... +......+.-...+.+-++-.. .++.. .+.....++++..|..+.-.
T Consensus 27 ~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l~ 106 (119)
T PF02801_consen 27 LARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALLA 106 (119)
T ss_dssp HHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHHH
Confidence 3678999999999999999998864 4322122333444555454321 12222 12234667777777777777
Q ss_pred HhcC
Q 039047 182 FKTY 185 (465)
Q Consensus 182 l~~g 185 (465)
++.+
T Consensus 107 l~~~ 110 (119)
T PF02801_consen 107 LEHG 110 (119)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 6654
No 195
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=75.93 E-value=10 Score=40.05 Aligned_cols=19 Identities=16% Similarity=0.368 Sum_probs=15.7
Q ss_pred hhhhccccceEEEEecCCc
Q 039047 213 ANCLFRSGGAVILLSNKRS 231 (465)
Q Consensus 213 ~~~lfgDGaaA~lLs~~~~ 231 (465)
..|..+|||+|+||++.+.
T Consensus 262 ~~s~~~DGAaA~vl~s~e~ 280 (426)
T PRK08170 262 NSSQITDGACWLLLASEEA 280 (426)
T ss_pred ccCCCCCceEEEEEecHHH
Confidence 3678899999999998654
No 196
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=74.90 E-value=3.9 Score=38.92 Aligned_cols=42 Identities=33% Similarity=0.392 Sum_probs=30.2
Q ss_pred hccccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhhee
Q 039047 369 FGNTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSC 410 (465)
Q Consensus 369 ~GNtssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~ 410 (465)
.|+-.+.|.|...+.+++.=.+++|++||=+|-|+|+....+
T Consensus 49 i~~~~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAll 90 (209)
T PF01135_consen 49 IGCGQTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAALL 90 (209)
T ss_dssp EETTEEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHHH
T ss_pred ecceeechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHH
Confidence 455577788888888888778999999999999999976544
No 197
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=73.74 E-value=9.4 Score=39.70 Aligned_cols=50 Identities=22% Similarity=0.367 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG 165 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~ 165 (465)
...|++++++++|++|+|||++-+.- ..+...-...+.||+. ...++.+|
T Consensus 288 ~~~a~~~a~~~Agi~~~did~~e~~d----~fa~~~~~~~e~lG~~--~~pvn~~G 337 (386)
T TIGR01930 288 PVPAIPKALKKAGLSISDIDLFEINE----AFAAQVLACIKELGLD--LEKVNVNG 337 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCCeeehcc----hhHHHHHHHHHHhCCC--hhhcCCCC
Confidence 35799999999999999999885431 1122333445778874 13455554
No 198
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=73.08 E-value=3.4 Score=43.17 Aligned_cols=50 Identities=16% Similarity=0.232 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG 165 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~ 165 (465)
...|+++||+++|++|+|||++=++- ......-...+.||+.+ ..++++|
T Consensus 292 ~~~a~~~al~~agl~~~Did~~ei~e----afa~~~l~~~e~lg~~~--~~vN~~G 341 (392)
T PRK07108 292 PVFAVPKLLKQAGLKVDDIDLWELNE----AFAVQVLYCRDTLGIPM--DRLNVNG 341 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCchHhhh----HHHHHHHHHHHhcCCCc--cccCCCC
Confidence 46899999999999999999875331 11111223346677753 3456665
No 199
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=72.99 E-value=14 Score=38.44 Aligned_cols=42 Identities=19% Similarity=0.187 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMR 155 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~ 155 (465)
...|++++++++|++++|||.+-..-+ .+...-...+.||+.
T Consensus 260 ~~~a~~~al~~aGi~~~did~~e~~d~----ft~~~~~~~e~lgl~ 301 (389)
T PRK06064 260 AVVAAEKAYKMAGIEPKDIDVAEVHDC----FTIAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCC----CcHHHHHHHHHcCCC
Confidence 347899999999999999998865421 112345566777764
No 200
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=72.88 E-value=10 Score=39.34 Aligned_cols=73 Identities=12% Similarity=0.177 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCh-HHHHHHHHcCCCCC-----------ceeeeecCCcchHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPS-LSSRIINRYKMRKD-----------IKVFNLTGMGCSASL 172 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps-~a~~i~~~lgl~~~-----------~~~~~l~~~gCs~~~ 172 (465)
...+....+.+++|+++|++++|||.+++.. ++..++- .-..+.+.++.+.+ ...=.+.+++|++-.
T Consensus 202 ~y~~~~~~~~~~~l~~~g~~~~did~~i~H~-p~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~ 280 (379)
T TIGR01835 202 QYLNAFENAWNDYAKRTGLSLADFAAFCFHV-PFTKMGLKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLY 280 (379)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHcCEEEECC-CCCcHHHHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHH
Confidence 3455667889999999999999999998765 2222221 11234466665421 112255566677766
Q ss_pred HHHHHH
Q 039047 173 ISVDIV 178 (465)
Q Consensus 173 ~al~~A 178 (465)
.+|.-+
T Consensus 281 l~L~~~ 286 (379)
T TIGR01835 281 LGLASL 286 (379)
T ss_pred HHHHHH
Confidence 666533
No 201
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=72.14 E-value=7.2 Score=37.54 Aligned_cols=84 Identities=11% Similarity=0.227 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCh-HHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcCC
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPS-LSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTYK 186 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps-~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g~ 186 (465)
+....-++.+|++++++.+|||.+-+.-.|....|- ..+.+++.+.+--+.+-+.++ .|-+-+ .+.+-.-.+ .
T Consensus 51 ~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kPlv~VN--HCigHI---EMGR~iTgA-~ 124 (336)
T KOG2708|consen 51 AWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKPLVGVN--HCIGHI---EMGREITGA-Q 124 (336)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCCcccch--hhhhhh---hhcceeccC-C
Confidence 445566788999999999999998887667766663 334445544432255666776 676544 333332222 2
Q ss_pred CCEEEEEEecC
Q 039047 187 NMNAMVVTSES 197 (465)
Q Consensus 187 ~~~aLVV~~E~ 197 (465)
+-.+|-|++-.
T Consensus 125 nPvvLYvSGGN 135 (336)
T KOG2708|consen 125 NPVVLYVSGGN 135 (336)
T ss_pred CCEEEEEeCCc
Confidence 45566665543
No 202
>PRK09604 UGMP family protein; Validated
Probab=71.87 E-value=12 Score=38.06 Aligned_cols=33 Identities=21% Similarity=0.244 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCC
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNISMIA 139 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~ 139 (465)
.+.....++++|+++|++++|||.|.++..|..
T Consensus 52 ~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~ 84 (332)
T PRK09604 52 VENIVPLIEEALKEAGLTLEDIDAIAVTAGPGL 84 (332)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCc
Confidence 456678899999999999999999999887654
No 203
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=71.22 E-value=24 Score=37.36 Aligned_cols=26 Identities=15% Similarity=0.415 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEe
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVVN 134 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~~ 134 (465)
....|++++++++|++|+|||++=++
T Consensus 310 ~~~~a~~~a~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 310 APAYAVPRLLARNGLTLQDFDFYEIH 335 (427)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 44569999999999999999988764
No 204
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=70.78 E-value=12 Score=38.18 Aligned_cols=68 Identities=12% Similarity=0.121 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-hHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHH
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNISMIAIMP-SLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDI 177 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~P-s~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~ 177 (465)
+-....++++|+++|++.+|||+|-++..|+-..+ ......++.|-+.-+.+.+.++ -|-|=+.+-.+
T Consensus 52 e~i~~li~~al~eA~~~~~dID~IA~T~gPGL~gaL~VG~~~Ak~LA~a~~kPli~Vn--H~~gHi~a~~l 120 (342)
T COG0533 52 ENIPPLIEEALAEAGVSLEDIDAIAVTAGPGLGGALLVGATAAKALALALNKPLIPVN--HLEGHIEAARL 120 (342)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEecCCCchhHHHHHHHHHHHHHHHhCCCEeecc--hHHHHHHHHHh
Confidence 44567889999999999999999988876664322 1233444444433346677777 56655544433
No 205
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=70.04 E-value=8.5 Score=39.85 Aligned_cols=77 Identities=16% Similarity=0.094 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCCC-CCceee----eecCCcchHHHHHHHHHHHHH
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKMR-KDIKVF----NLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl~-~~~~~~----~l~~~gCs~~~~al~~A~~ll 182 (465)
-..++++++|+++|++++|||.+... ++.....+.-...+..-++-. +.++.. .+....+++|+..+-.+...|
T Consensus 276 ~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l 355 (406)
T cd00834 276 GAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLAL 355 (406)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHH
Confidence 34678999999999999999998864 433333334444555555542 112211 223346777777777777777
Q ss_pred hcC
Q 039047 183 KTY 185 (465)
Q Consensus 183 ~~g 185 (465)
+.+
T Consensus 356 ~~~ 358 (406)
T cd00834 356 RDG 358 (406)
T ss_pred hcC
Confidence 766
No 206
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=69.43 E-value=9.1 Score=39.98 Aligned_cols=66 Identities=20% Similarity=0.337 Sum_probs=40.3
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC--------CcchHHHHHHHHHHHHH
Q 039047 111 EDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG--------MGCSASLISVDIVRSVF 182 (465)
Q Consensus 111 ~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~--------~gCs~~~~al~~A~~ll 182 (465)
..+++++++++|++|+|||.+=++- ..+...-...+.||+.+ ..++.+| .|++|....++++.+|-
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~ 367 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINE----AFSVVALANQKLLGLDP--EKVNVHGGAVSLGHPIGCSGARILVTLLGVLR 367 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCCc--cccCCCCChHhhCCCHHHHHHHHHHHHHHHHH
Confidence 4699999999999999999886531 12233344556777742 2344443 13444444455555553
No 207
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=69.36 E-value=10 Score=39.59 Aligned_cols=56 Identities=21% Similarity=0.297 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchH
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSA 170 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~ 170 (465)
.....|++++++++|++|+|||++=++- .++...-...+.||+.+ ..+|.+| |.-+
T Consensus 288 ~~~~~a~~~a~~~agl~~~Did~~Ei~d----~Fa~~~l~~~e~lG~~~--~pvN~~G-G~la 343 (390)
T PRK06504 288 EAPLPATERALKKAGMKIDDIDLYEVNE----AFASVPLAWLKATGADP--ERLNVNG-GAIA 343 (390)
T ss_pred ccHHHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHhCCCC--CCcCCCC-cHHh
Confidence 3445699999999999999999886542 13344456678899874 3577776 5443
No 208
>PRK06158 thiolase; Provisional
Probab=68.92 E-value=18 Score=37.56 Aligned_cols=41 Identities=12% Similarity=0.250 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKMR 155 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl~ 155 (465)
...|++++++++|++|+|||++=+. + ++...-+..+.||+.
T Consensus 256 ~~~aa~~A~~~AGi~p~DId~~ElyD~-----Fs~~~l~~~E~lG~~ 297 (384)
T PRK06158 256 AAESGPRAFAMAGLTPADIDVVELYDA-----FTINTILFLEDLGFC 297 (384)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEecCC-----chHHHHHHHHHcCCC
Confidence 4579999999999999999988553 3 233334445666664
No 209
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=68.11 E-value=15 Score=38.40 Aligned_cols=70 Identities=13% Similarity=0.247 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCC----------------ceeeeecC--------
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKD----------------IKVFNLTG-------- 165 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~----------------~~~~~l~~-------- 165 (465)
...|+++||+++|++++|||++=++- .++...-...+.||+.+. -..+|.+|
T Consensus 271 ~~~A~~~al~~Agi~~~DID~~Ei~d----~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP 346 (393)
T cd00826 271 PIEAARKALEKAGLGIGDLDLIEAHD----AFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHP 346 (393)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhh----hhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCC
Confidence 46899999999999999999876542 123334455566776531 13455554
Q ss_pred CcchHHHHHHHHHHHHHh
Q 039047 166 MGCSASLISVDIVRSVFK 183 (465)
Q Consensus 166 ~gCs~~~~al~~A~~ll~ 183 (465)
.||+|....++++.+|-.
T Consensus 347 ~gAtG~~~~~e~~~qL~g 364 (393)
T cd00826 347 IGASGAAICAELCFELKG 364 (393)
T ss_pred ccccHHHHHHHHHHHHhh
Confidence 245555566666666643
No 210
>PRK08256 lipid-transfer protein; Provisional
Probab=67.37 E-value=22 Score=36.96 Aligned_cols=43 Identities=12% Similarity=0.266 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRK 156 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~ 156 (465)
...|++++++++|++++|||.+-+.- ..+...-...+.||+.+
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~d----~f~~~~l~~le~lg~~~ 308 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELHD----CFSANELLTYEALGLCP 308 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeecc----CCcHHHHHHHHHcCCCC
Confidence 35799999999999999999886642 13344455567777764
No 211
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=66.78 E-value=18 Score=36.43 Aligned_cols=59 Identities=12% Similarity=0.108 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-hHHHHHHHHcCCCCCceeeeecC
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMP-SLSSRIINRYKMRKDIKVFNLTG 165 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~P-s~a~~i~~~lgl~~~~~~~~l~~ 165 (465)
.+.....++++|+++|++++|||.|.++..|..... ..+...++.|...-+++.+.++.
T Consensus 49 ~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tglrvg~~~Ak~la~~~~~p~~~v~h 108 (305)
T TIGR00329 49 AENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGSLRVGATFARSLALSLDKPLIGVNH 108 (305)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhhHHHHHHHHHHHHHHhCCCEeeccc
Confidence 355577889999999999999999999987764333 12222233332222345555554
No 212
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=66.71 E-value=16 Score=37.46 Aligned_cols=47 Identities=15% Similarity=0.091 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEE-eecCCCCCChHHHHHHHHcCC
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVV-NISMIAIMPSLSSRIINRYKM 154 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~-~~s~~~~~Ps~a~~i~~~lgl 154 (465)
+-...|++++|+++|++|+|||.+-. .+++..--+.-...|.+-||-
T Consensus 206 ~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 206 DGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 44578999999999999999998765 343333344445667777764
No 213
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=66.33 E-value=11 Score=39.32 Aligned_cols=76 Identities=14% Similarity=0.104 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCCC-CCceee----eecCCcchHHHHHHHHHHHHHh
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKMR-KDIKVF----NLTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl~-~~~~~~----~l~~~gCs~~~~al~~A~~ll~ 183 (465)
...|+++||+++|++|+|||.+-.. +.+....+.-...+...+|.. .+++.. .+....+++|+..+..+...|+
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~ 357 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIR 357 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHh
Confidence 3578999999999999999998753 433233333344555656632 122221 1222234555555555555555
Q ss_pred cC
Q 039047 184 TY 185 (465)
Q Consensus 184 ~g 185 (465)
.+
T Consensus 358 ~~ 359 (411)
T PRK07314 358 DQ 359 (411)
T ss_pred CC
Confidence 54
No 214
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=66.22 E-value=20 Score=37.61 Aligned_cols=45 Identities=9% Similarity=0.045 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCC
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKM 154 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl 154 (465)
-..+++++||+++|+ ++|||.|... +++..--..=...|.+.++.
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~ 326 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAG 326 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCC
Confidence 346899999999999 8999998753 43322233334556666664
No 215
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=65.74 E-value=26 Score=36.40 Aligned_cols=74 Identities=11% Similarity=0.033 Sum_probs=43.0
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCCCCC---ceeeeecCCcchHHHHHHHHHHHHHhcC
Q 039047 111 EDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKMRKD---IKVFNLTGMGCSASLISVDIVRSVFKTY 185 (465)
Q Consensus 111 ~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl~~~---~~~~~l~~~gCs~~~~al~~A~~ll~~g 185 (465)
.++++++|+++|++|+|||.+... +....-.+.-...|.+.+|-+.. .+. .+....+++|+..+..+...|+.+
T Consensus 263 ~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~pv~s~K~-~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 263 ILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGVPCSSTKG-LTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCCceeCCCc-ccccChhhcchHHHHHHHHHHhcC
Confidence 579999999999999999998763 43222223334555555653211 111 123335555555555555555554
No 216
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=65.21 E-value=12 Score=38.79 Aligned_cols=78 Identities=14% Similarity=0.056 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCCC-CCceee----eecCCcchHHHHHHHHHHHH
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKMR-KDIKVF----NLTGMGCSASLISVDIVRSV 181 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl~-~~~~~~----~l~~~gCs~~~~al~~A~~l 181 (465)
+-..++++++|+++|++|+|||.|... +++...-+.-...+.+-+|-. +.++.. .+.....++++..+..+...
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~ 353 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQS 353 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHH
Confidence 445788999999999999999998753 433322333344444444421 112222 22223444555555555555
Q ss_pred HhcC
Q 039047 182 FKTY 185 (465)
Q Consensus 182 l~~g 185 (465)
++.+
T Consensus 354 l~~~ 357 (407)
T cd00828 354 LEHG 357 (407)
T ss_pred HhcC
Confidence 5544
No 217
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=64.86 E-value=17 Score=37.92 Aligned_cols=69 Identities=17% Similarity=0.323 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHH-HHHHcCCCCCceeeeecC--------CcchHHHHHHHHHHH
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSR-IINRYKMRKDIKVFNLTG--------MGCSASLISVDIVRS 180 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~-i~~~lgl~~~~~~~~l~~--------~gCs~~~~al~~A~~ 180 (465)
...|+++||+++|++|+|||++=++= .. +.... -.+.||+. ...++++| .|++|....+.++.+
T Consensus 292 ~~~a~~~Al~~AGl~p~DID~~ei~d----af-a~~~l~~~~~l~~~--~~~vN~sGg~~a~GHplgAtG~~~~~~~~~q 364 (392)
T PRK06633 292 PVPASQKALSKAGWSVNDLEVIEVNE----AF-AAQSIYVNREMKWD--MEKVNINGGAIAIGHPIGASGGRVLITLIHG 364 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhh----HH-HHHHHHHHhhhCCC--ccccCCCCchHhhCCcHHHHHHHHHHHHHHH
Confidence 46799999999999999999886431 00 11111 13344543 12334433 356666667777777
Q ss_pred HHhcC
Q 039047 181 VFKTY 185 (465)
Q Consensus 181 ll~~g 185 (465)
|-+.+
T Consensus 365 L~~~~ 369 (392)
T PRK06633 365 LRRAK 369 (392)
T ss_pred HHhcC
Confidence 75543
No 218
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=64.55 E-value=14 Score=38.38 Aligned_cols=49 Identities=16% Similarity=0.249 Sum_probs=35.3
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC
Q 039047 111 EDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG 165 (465)
Q Consensus 111 ~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~ 165 (465)
..|+++|++++|++|+|||++=++- ......-...+.||+.+ +.+|.+|
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~d----~Fa~~~~~~~e~lG~~~--~pvN~~G 331 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEINE----AFAPVVLAWLKETGADP--AKVNPNG 331 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeecc----cchHHHHHHHHHhCCCc--hhcCCCc
Confidence 5799999999999999999885531 12334455567788864 4667765
No 219
>PRK05790 putative acyltransferase; Provisional
Probab=64.30 E-value=22 Score=37.02 Aligned_cols=68 Identities=19% Similarity=0.345 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC--------CcchHHHHHHHHHHHH
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG--------MGCSASLISVDIVRSV 181 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~--------~gCs~~~~al~~A~~l 181 (465)
...|++++++++|++|+|||++-+.- ......-...+.||+.. ..++++| .|++|....++++.+|
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~l~~~e~lg~~~--~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL 366 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEINE----AFAAQALAVEKELGLDP--EKVNVNGGAIALGHPIGASGARILVTLLHEM 366 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCCh--hhcCCCcchhhhCcchhhhHHHHHHHHHHHH
Confidence 35799999999999999999886531 12233445567788742 2344443 2444445555555555
Q ss_pred Hh
Q 039047 182 FK 183 (465)
Q Consensus 182 l~ 183 (465)
-.
T Consensus 367 ~~ 368 (393)
T PRK05790 367 KR 368 (393)
T ss_pred Hh
Confidence 43
No 220
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=64.13 E-value=9.7 Score=35.80 Aligned_cols=59 Identities=14% Similarity=0.264 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-hHHHHHHHHcCCCCCceeeeecC
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMP-SLSSRIINRYKMRKDIKVFNLTG 165 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~P-s~a~~i~~~lgl~~~~~~~~l~~ 165 (465)
.+.....++++|+++|++++|||.++++..|+..+. -.+..+++-+...-+++.+.++.
T Consensus 34 ~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTGlRig~~~akgla~~~~~p~~~vss 93 (202)
T TIGR03725 34 SEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTGLRIGLATAKGLALALGIPLVGVSS 93 (202)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhCCCEEecCH
Confidence 456677899999999999999999999987765544 12333333332222456666663
No 221
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=63.14 E-value=15 Score=38.78 Aligned_cols=44 Identities=20% Similarity=0.221 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEE-eecCCCCCChHHHHHHHHcC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVV-NISMIAIMPSLSSRIINRYK 153 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~-~~s~~~~~Ps~a~~i~~~lg 153 (465)
+..|.+.||+++|++|+|||.|-. .||+..-...-+..|.+-+|
T Consensus 278 a~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg 322 (412)
T COG0304 278 AIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFG 322 (412)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhc
Confidence 458999999999999999999985 46544444444555555566
No 222
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=62.97 E-value=19 Score=39.37 Aligned_cols=76 Identities=14% Similarity=0.112 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEE-eecCCCCCChHHHHHHHHcCCCCCceee----eecCCcchHHHHHHHHHHHHHhc
Q 039047 110 FEDSIAKILDRSGISPKEIDILVV-NISMIAIMPSLSSRIINRYKMRKDIKVF----NLTGMGCSASLISVDIVRSVFKT 184 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~-~~s~~~~~Ps~a~~i~~~lgl~~~~~~~----~l~~~gCs~~~~al~~A~~ll~~ 184 (465)
...+.+++|+++|++|+|||.|-. ++++..--+.=...|.+-+|-.+.++.. .+....+++|+..+..+...|+.
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~ 486 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRT 486 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHhc
Confidence 457899999999999999998865 3433222233345566666643222222 12222344444444444445554
Q ss_pred C
Q 039047 185 Y 185 (465)
Q Consensus 185 g 185 (465)
+
T Consensus 487 g 487 (540)
T PLN02787 487 G 487 (540)
T ss_pred C
Confidence 4
No 223
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=62.58 E-value=17 Score=37.73 Aligned_cols=45 Identities=16% Similarity=0.195 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKM 154 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl 154 (465)
...+++++|+++|++|+|||.+... +.....-+.-...+.+.+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 4678999999999999999998753 43332334444555666654
No 224
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=62.18 E-value=97 Score=32.36 Aligned_cols=64 Identities=14% Similarity=-0.174 Sum_probs=38.1
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCcccchhHHHH-------------------HhhhccccccHHHHH
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMT-------------------LHRFGNTSAASLWYV 380 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~-------------------l~~~GNtssasi~~~ 380 (465)
+++|+.+ ..+|||.+-+|-.-..+.-...+.||+-+.--- ... +--+||...++=...
T Consensus 273 ~~aGi~~-p~~diD~~ei~D~Fs~~~l~~~E~lG~~~~G~~--~~~~~~g~~~~~G~~pvN~~GG~la~Ghp~gatG~~~ 349 (392)
T PRK06065 273 KMAGIER-PRKEIDVAEPYDPFDYKELHHLEGLQLAKRGEA--PKLLKEGVFDIDGDIPSSPSGGLLGVGNPIAAAGLMK 349 (392)
T ss_pred HHcCCCC-chhhCcEEEecCCChHHHHHHHHHcCCCCCCcH--HHHHHCCCccCCCCeeecCCCccccCCCCccHHHHHH
Confidence 3467652 037999999997765555555688886653110 111 122788877766666
Q ss_pred HHHHHH
Q 039047 381 LAYMEA 386 (465)
Q Consensus 381 L~~~~~ 386 (465)
+.++..
T Consensus 350 ~~e~~~ 355 (392)
T PRK06065 350 VISIYW 355 (392)
T ss_pred HHHHHH
Confidence 665433
No 225
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=62.09 E-value=24 Score=35.71 Aligned_cols=59 Identities=14% Similarity=0.153 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-hHHHHHHHHcCCCCCceeeeecC
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMP-SLSSRIINRYKMRKDIKVFNLTG 165 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~P-s~a~~i~~~lgl~~~~~~~~l~~ 165 (465)
.+.....++++|+++|++.+|||.|.++..|...+. -.+..+++.|...-+++.+.++.
T Consensus 50 ~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~~p~~~v~h 109 (314)
T TIGR03723 50 LEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALNKPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhCCCEEeccc
Confidence 455677899999999999999999999987764333 12233333333222355666664
No 226
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=62.07 E-value=16 Score=31.43 Aligned_cols=63 Identities=14% Similarity=0.309 Sum_probs=43.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCC--CCCChHHHHHHHHc-CCCCCceeeeecCCcchHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMI--AIMPSLSSRIINRY-KMRKDIKVFNLTGMGCSAS 171 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~--~~~Ps~a~~i~~~l-gl~~~~~~~~l~~~gCs~~ 171 (465)
+..+=..+-.++.+++.+++++||--+++++|++ ..+| +..++++ |+. +++.++...|.=-|+
T Consensus 17 ~I~~at~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FP---A~aaR~~~Gw~-~Vplmc~qEm~V~gs 82 (117)
T TIGR01796 17 EIGEAVAELLTELMERNELTPEDLISVIFTVTEDLHADFP---AAAARGLPGWT-DVPVMCAQEIPVEGS 82 (117)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEecCcccccCh---HHHHHhccCCC-CcceeccCcCCCCCC
Confidence 3334444556778899999999999999987654 3456 4455566 887 788888776544433
No 227
>PRK07937 lipid-transfer protein; Provisional
Probab=61.73 E-value=36 Score=35.06 Aligned_cols=77 Identities=10% Similarity=0.058 Sum_probs=45.4
Q ss_pred HHHHHHHHHH-cCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCC-------cchHHHHHHHHHHHHH
Q 039047 111 EDSIAKILDR-SGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGM-------GCSASLISVDIVRSVF 182 (465)
Q Consensus 111 ~~Aa~~aL~~-agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~-------gCs~~~~al~~A~~ll 182 (465)
..++++++++ +|++|+|||++=+.- ..+...-...+.||+..+ ..+|.+|- ||+|....++.+.+|.
T Consensus 249 ~~~~~~a~~~aAgi~~~diD~~Ei~D----~F~~~~l~~~e~lGl~g~-~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~ 323 (352)
T PRK07937 249 SPSTALAAEAATGGDAGGVDVAELHA----PFTHQELILREALGLGDK-TKVNPSGGALAANPMFAAGLERIGEAARHIW 323 (352)
T ss_pred HHHHHHHHHHhcCCCHHHCCEEEEeC----CChHHHHHHHHHcCCCCC-CCcCCCccchhcCchhHHHHHHHHHHHHHHh
Confidence 3455566666 499999999886542 234455566788998633 35666652 3434444445555554
Q ss_pred hcCCCCEEEEE
Q 039047 183 KTYKNMNAMVV 193 (465)
Q Consensus 183 ~~g~~~~aLVV 193 (465)
.. ..+++|+.
T Consensus 324 g~-~a~~~l~~ 333 (352)
T PRK07937 324 DG-SARRALAH 333 (352)
T ss_pred cc-CCCEEEEe
Confidence 33 34666654
No 228
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=61.28 E-value=15 Score=37.63 Aligned_cols=48 Identities=23% Similarity=0.340 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-----hHHHHHHHHcCCC
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNISMIAIMP-----SLSSRIINRYKMR 155 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~P-----s~a~~i~~~lgl~ 155 (465)
+-...+++++|+++|++|+|+|+|-|+..|+.+.+ +.|-.++.++..+
T Consensus 84 ~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 84 ENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 44567889999999999999999999887776555 4566666666654
No 229
>PRK07855 lipid-transfer protein; Provisional
Probab=61.05 E-value=36 Score=35.45 Aligned_cols=24 Identities=21% Similarity=0.416 Sum_probs=21.2
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEe
Q 039047 111 EDSIAKILDRSGISPKEIDILVVN 134 (465)
Q Consensus 111 ~~Aa~~aL~~agi~~~dId~li~~ 134 (465)
..|+++|++++|++++|||++=+.
T Consensus 269 ~~aa~~a~~~AGi~~~DiDv~El~ 292 (386)
T PRK07855 269 GLVARQLWAQSGLGPADIDTAILY 292 (386)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEec
Confidence 479999999999999999988653
No 230
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=61.01 E-value=25 Score=37.02 Aligned_cols=77 Identities=10% Similarity=-0.022 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHH-cCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCCCC--Cceee----eecCCcchHHHHHHHHHHH
Q 039047 109 FFEDSIAKILDR-SGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKMRK--DIKVF----NLTGMGCSASLISVDIVRS 180 (465)
Q Consensus 109 la~~Aa~~aL~~-agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl~~--~~~~~----~l~~~gCs~~~~al~~A~~ 180 (465)
-...|++++|++ +|++|+|||.|-.. +.+....+.-...+.+-+|-.. .++.- .+.....++|+..+..+..
T Consensus 284 ~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l 363 (421)
T PTZ00050 284 GARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTIL 363 (421)
T ss_pred HHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHH
Confidence 456799999999 99999999998764 4332222233345666666421 22211 2222344455555555555
Q ss_pred HHhcC
Q 039047 181 VFKTY 185 (465)
Q Consensus 181 ll~~g 185 (465)
.|+.+
T Consensus 364 ~l~~~ 368 (421)
T PTZ00050 364 SLYEQ 368 (421)
T ss_pred HHHcC
Confidence 55554
No 231
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=60.45 E-value=23 Score=37.66 Aligned_cols=43 Identities=12% Similarity=0.203 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRK 156 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~ 156 (465)
+..|++++++++|++|+|||++=++- ..+...-...+.||+.+
T Consensus 311 ~~~A~~~a~~~AGl~~~DiD~~Ei~d----aFa~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 311 SRAAAQKALSMAGVKPSDLQVAEVHD----CFTIAELLMYEALGIAE 353 (438)
T ss_pred HHHHHHHHHHHcCCCHHHCcEeeecc----cChHHHHHHHHHcCCCC
Confidence 46899999999999999999886642 13344455567777764
No 232
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=59.98 E-value=19 Score=37.60 Aligned_cols=76 Identities=11% Similarity=0.199 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCCCCCceeee----ecCCcchHHHHHHHHHHHHHh
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKMRKDIKVFN----LTGMGCSASLISVDIVRSVFK 183 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl~~~~~~~~----l~~~gCs~~~~al~~A~~ll~ 183 (465)
-...|++++|+++|++|++||.|... +++..-.+.-...|.+-||-. .++... +....+++++..+..+...|+
T Consensus 271 ~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~ 349 (399)
T cd00832 271 GLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALLALR 349 (399)
T ss_pred HHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHHHHh
Confidence 35678999999999999999988753 443333444455666667643 222211 222345555555555555566
Q ss_pred cC
Q 039047 184 TY 185 (465)
Q Consensus 184 ~g 185 (465)
.+
T Consensus 350 ~~ 351 (399)
T cd00832 350 DG 351 (399)
T ss_pred CC
Confidence 54
No 233
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=59.04 E-value=19 Score=37.54 Aligned_cols=76 Identities=14% Similarity=0.137 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCCCCCceeee----ecCCcchHHHHHHHHHHHHH
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKMRKDIKVFN----LTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl~~~~~~~~----l~~~gCs~~~~al~~A~~ll 182 (465)
+....|++++|+++|++|+|||.+-.. +++....+.-...|.+-+|- +++... +.....++|+..+..+...|
T Consensus 254 ~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg~--~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l 331 (381)
T PRK05952 254 KSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFPH--RVAVSSTKGATGHTLGASGALGVAFSLLAL 331 (381)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcCC--CCeeecchhhhccChHHHHHHHHHHHHHHH
Confidence 346789999999999999999998753 43332233334445555652 222221 22223444454554454455
Q ss_pred hcC
Q 039047 183 KTY 185 (465)
Q Consensus 183 ~~g 185 (465)
+.+
T Consensus 332 ~~~ 334 (381)
T PRK05952 332 RHQ 334 (381)
T ss_pred hcC
Confidence 544
No 234
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=59.00 E-value=22 Score=30.70 Aligned_cols=58 Identities=19% Similarity=0.349 Sum_probs=36.4
Q ss_pred hhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCC--CCCChHHHHHHHHc-CCCCCceeeeecC
Q 039047 104 DEMEEFFEDSIAKILDRSGISPKEIDILVVNISMI--AIMPSLSSRIINRY-KMRKDIKVFNLTG 165 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~--~~~Ps~a~~i~~~l-gl~~~~~~~~l~~ 165 (465)
++..+=..+-.++.+++.+++++||--+++++|++ ...|.. .++++ |+. +++-+....
T Consensus 16 e~I~~at~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~---a~R~~~g~~-~Vpl~c~~E 76 (118)
T PF07736_consen 16 EEILEATRELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAA---AARELPGWD-DVPLMCAQE 76 (118)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCH---HHHHTTTGT-TSEEEEEE-
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHH---HHHccCCCC-ccceeccCc
Confidence 34444455556778899999999999999987765 346643 33444 776 677777665
No 235
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=58.73 E-value=14 Score=36.46 Aligned_cols=58 Identities=17% Similarity=0.245 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-hHHHHHHHHcCCCCCceeeeecC
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNISMIAIMP-SLSSRIINRYKMRKDIKVFNLTG 165 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~P-s~a~~i~~~lgl~~~~~~~~l~~ 165 (465)
+.....++++|++++++++|||.+.++..|+..+. -.+..+++.|...-+++.+.++.
T Consensus 31 ~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~~Pli~v~~ 89 (268)
T PF00814_consen 31 ENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALNIPLIGVSH 89 (268)
T ss_dssp HHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT--EEEEEH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhCCCeEeecc
Confidence 44568899999999999999999999987765443 12222333332222355666663
No 236
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=58.60 E-value=20 Score=30.83 Aligned_cols=63 Identities=17% Similarity=0.298 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCC--CCCChHHHHHHHHcCCCCCceeeeecCCcchH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMI--AIMPSLSSRIINRYKMRKDIKVFNLTGMGCSA 170 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~--~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~ 170 (465)
+..+=..+-.++.+++.+++++||--+++++|++ ..+| +..++++|.-.+++-++...|.=-|
T Consensus 17 ~I~~at~eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FP---A~aaR~~~~~~~Vplmc~qE~~V~g 81 (117)
T cd02185 17 EILEATRELLEEIIERNNIKPEDIISVIFTVTPDLDAAFP---AKAARELGGWKYVPLMCAQEMDVPG 81 (117)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCcccccCh---HHHHHhcCCCCCcceeecCcCCCCC
Confidence 3334444556777889999999999999987654 3455 4556666444478888777654443
No 237
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=58.51 E-value=7.6 Score=39.15 Aligned_cols=86 Identities=22% Similarity=0.143 Sum_probs=58.6
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCcccchhHHHH-Hhhhcc---ccccHHHHHHHHHHHcCCCCCCCE
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEYDLEPARMT-LHRFGN---TSAASLWYVLAYMEAKKRLKKGDR 395 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e~~~~s~~~-l~~~GN---tssasi~~~L~~~~~~g~l~~Gd~ 395 (465)
+++|+. ++|||+|=++-.-..+.-...|.||++++++.. .- ---.|| +|.+.+...|.+.+++..=+.|
T Consensus 305 k~aG~~---~sdVd~~EiNEAFs~v~lA~iK~LgldP~kVNv--~GGAValGHPlG~SGaRi~~tL~~~L~~~~g~~G-- 377 (396)
T KOG1390|consen 305 KKAGLE---QSDVDYWEINEAFSVVVLANIKKLGLDPSKVNV--HGGAVALGHPLGMSGARILVTLLHTLEQKGGKIG-- 377 (396)
T ss_pred HHcCcc---hhhhhHHhhhhhhhHHHHHHHHHhCCCHhhccC--CCceeecCCCcCCcchhHHHHHHHHHHhhCCcee--
Confidence 457888 699999999977778888899999999999853 10 012344 6778899999998886211222
Q ss_pred EEEEeeCchhhhheeeeE
Q 039047 396 VLMISFGAGFKCNSCVWE 413 (465)
Q Consensus 396 vl~~sfGaG~~~~~~v~~ 413 (465)
|.-+.-|.|.. .+++++
T Consensus 378 vAaiCnGGGga-sa~vie 394 (396)
T KOG1390|consen 378 VAAICNGGGGA-SAMVIE 394 (396)
T ss_pred EEEEecCCCce-eeEEEe
Confidence 44555666654 344444
No 238
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=58.39 E-value=31 Score=35.99 Aligned_cols=47 Identities=15% Similarity=0.204 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCC
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKM 154 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl 154 (465)
.....+++++|+++|++++|||.+... ++.......-...+..-+|.
T Consensus 279 ~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 279 PAQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 344678999999999999999999864 43222122233455555553
No 239
>PRK14878 UGMP family protein; Provisional
Probab=58.22 E-value=21 Score=36.29 Aligned_cols=44 Identities=20% Similarity=0.280 Sum_probs=32.2
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-----hHHHHHHHHcCC
Q 039047 111 EDSIAKILDRSGISPKEIDILVVNISMIAIMP-----SLSSRIINRYKM 154 (465)
Q Consensus 111 ~~Aa~~aL~~agi~~~dId~li~~~s~~~~~P-----s~a~~i~~~lgl 154 (465)
..+++++|+++|++++|||.|.++..|..... +.+..++..++.
T Consensus 49 ~~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~ 97 (323)
T PRK14878 49 PELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNK 97 (323)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCC
Confidence 38899999999999999999999887664332 224444445554
No 240
>PRK08304 stage V sporulation protein AD; Validated
Probab=55.47 E-value=55 Score=33.48 Aligned_cols=92 Identities=20% Similarity=0.327 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCC-----C--ceeeeec---------CCcchH
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRK-----D--IKVFNLT---------GMGCSA 170 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~-----~--~~~~~l~---------~~gCs~ 170 (465)
..-|++.+.+=|+++|.+|+|-|+||..- .....-.+...+..+-|+.- | +..||.. |-|||+
T Consensus 207 apAa~dti~~h~~d~~~~~~~yDli~tGD-lg~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa 285 (337)
T PRK08304 207 APAAADTIQQHFKDTGRSPEDYDLIVTGD-LGRVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSA 285 (337)
T ss_pred hHHHHHHHHHHHHHcCCChhhccEEEEcc-hHHHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhH
Confidence 34566777788999999999999888652 11112234444444444421 1 3445422 235666
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEEEecCC-CC
Q 039047 171 SLISVDIVRSVFKTYKNMNAMVVTSESL-SP 200 (465)
Q Consensus 171 ~~~al~~A~~ll~~g~~~~aLVV~~E~~-s~ 200 (465)
.+..=.+- ..++.+..+++|+|++-.+ |+
T Consensus 286 ~v~~~~~~-~~~~~g~~~rvl~v~tGaLls~ 315 (337)
T PRK08304 286 VVTYGYLL-KELQKGKLKRVLVVATGALLSP 315 (337)
T ss_pred HHHHHHHH-HHHhcCCceEEEEEEchhhcCc
Confidence 55544443 4445677899999998774 54
No 241
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=55.19 E-value=31 Score=36.39 Aligned_cols=44 Identities=16% Similarity=0.151 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYK 153 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lg 153 (465)
..++++++|+++|++|+|||.+... +++....+.-...|.+.+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 5688999999999999999999864 4333223333344455555
No 242
>PLN03173 chalcone synthase; Provisional
Probab=55.14 E-value=34 Score=35.76 Aligned_cols=70 Identities=14% Similarity=0.213 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCcee-----e-eecCCcchHHHHHHHHHH
Q 039047 106 MEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKV-----F-NLTGMGCSASLISVDIVR 179 (465)
Q Consensus 106 ~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~-----~-~l~~~gCs~~~~al~~A~ 179 (465)
+.......++++|+++|++++|||..++.. ..+.+-..++++||++++... + +..+|+.++-..+|+.+.
T Consensus 275 ~~~~~~~~i~~~L~~~gl~~~di~~~v~Hq----gg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~ 350 (391)
T PLN03173 275 ISKNVEKSLTEAFKPLGISDWNSLFWIAHP----GGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMR 350 (391)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCeEEECC----CcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHH
Confidence 445566678899999999999999976643 244566788999999864322 2 233344444444554443
No 243
>PLN03170 chalcone synthase; Provisional
Probab=55.12 E-value=32 Score=36.02 Aligned_cols=71 Identities=15% Similarity=0.224 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCcee-----e-eecCCcchHHHHHHHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKV-----F-NLTGMGCSASLISVDIV 178 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~-----~-~l~~~gCs~~~~al~~A 178 (465)
-+.+.....++++|+++|+.++|||..++.-. -+.+-..+.++||++++... + +..+|+.++-+.+|+..
T Consensus 278 ~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqg----g~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~ 353 (401)
T PLN03170 278 LISKNIERSLEEAFKPLGITDYNSIFWVAHPG----GPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEM 353 (401)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCeEEecCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 34455566788999999999999998765431 44566788899999854321 2 34445555556666555
Q ss_pred H
Q 039047 179 R 179 (465)
Q Consensus 179 ~ 179 (465)
.
T Consensus 354 ~ 354 (401)
T PLN03170 354 R 354 (401)
T ss_pred H
Confidence 3
No 244
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=54.20 E-value=29 Score=36.43 Aligned_cols=44 Identities=11% Similarity=0.003 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEE-eecCCCCCChHHHHHHHHcC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVV-NISMIAIMPSLSSRIINRYK 153 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~-~~s~~~~~Ps~a~~i~~~lg 153 (465)
...|++++|+++|++|+|||.+-. .+.+..--+.-...|.+-+|
T Consensus 280 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg 324 (414)
T PRK08722 280 GALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALG 324 (414)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhc
Confidence 467899999999999999998865 34333334444556666666
No 245
>PRK12404 stage V sporulation protein AD; Provisional
Probab=52.84 E-value=63 Score=32.93 Aligned_cols=92 Identities=20% Similarity=0.303 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCC------C--ceeeee--------cCCcchH
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRK------D--IKVFNL--------TGMGCSA 170 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~------~--~~~~~l--------~~~gCs~ 170 (465)
..-|++.+.+=|++.|.+|+|-|+||..- .....-.+...+..+-|+.- | +..||- +|-|||+
T Consensus 205 APAA~dti~~h~~d~~~~~~~yDlI~TGD-Lg~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA 283 (334)
T PRK12404 205 APAAVDTIEAHLRDRQIDASYYDLIVTGD-LGHVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSA 283 (334)
T ss_pred hHHHHHHHHHHHHHhCCChhhccEEEEcc-hHHHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHH
Confidence 34567777788999999999999888652 11122234445555445421 1 233332 2235565
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEEEecCC-CC
Q 039047 171 SLISVDIVRSVFKTYKNMNAMVVTSESL-SP 200 (465)
Q Consensus 171 ~~~al~~A~~ll~~g~~~~aLVV~~E~~-s~ 200 (465)
.+..=.+ ...++.|..+++|+|++-.+ |+
T Consensus 284 ~v~~g~~-~~~~~~g~~~rvL~v~TGALlS~ 313 (334)
T PRK12404 284 TVTYGHL-LNRMKRGELKRILVVATGALLSP 313 (334)
T ss_pred HHHHHHH-HHHHhcCCceEEEEEEchhhcCc
Confidence 5544333 34455677899999998774 54
No 246
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=52.31 E-value=16 Score=35.22 Aligned_cols=74 Identities=15% Similarity=0.142 Sum_probs=41.5
Q ss_pred CCcCCCCCccCCccEEEec----CCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCE
Q 039047 320 GEKKAGVNFRTGVDHFCIH----TGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDR 395 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H----~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~ 395 (465)
++.|.. .+||+|++.= ...+.+--.+.+.|||++.-- |.-+.-.|--++.+-+-.-.+..+. .||.+
T Consensus 113 ~~~g~~---~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~---R~~i~~~GC~gg~~~L~~A~~~~~~---~p~a~ 183 (226)
T PF00195_consen 113 AEAGLD---PSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQ---RTPIFGMGCAGGAAGLRRAKDIARA---NPGAR 183 (226)
T ss_dssp HHHTS----GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSE---EEEEES-GGGHHHHHHHHHHHHHHH---STT-E
T ss_pred HHcCCC---CcccceEEEEecCCcCCCchhHHHHhcCCCCCCcE---EEEEeccchhhHHHHHHHHHHHHhC---Cccce
Confidence 345666 5899999965 233456668999999997543 3444444544444444222333322 48999
Q ss_pred EEEEeeC
Q 039047 396 VLMISFG 402 (465)
Q Consensus 396 vl~~sfG 402 (465)
||+++.=
T Consensus 184 VLvv~vE 190 (226)
T PF00195_consen 184 VLVVCVE 190 (226)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9998753
No 247
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=51.96 E-value=74 Score=33.08 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHcCCC--cCCcCEEEEeecCCCCCChHHHHHHHHcCCCC
Q 039047 109 FFEDSIAKILDRSGIS--PKEIDILVVNISMIAIMPSLSSRIINRYKMRK 156 (465)
Q Consensus 109 la~~Aa~~aL~~agi~--~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~ 156 (465)
....|++++++++|++ ++|||++=+.- ..+...-...+.||+.+
T Consensus 256 ~~~~a~~~a~~~Agi~~p~~Did~~el~d----~F~~~~~~~~e~lGl~~ 301 (386)
T PRK08313 256 AGRDAAAALWKAAGITDPRDEIDVAEIYV----PFSWFEPMWLENLGFAP 301 (386)
T ss_pred HHHHHHHHHHHHcCCCCChhhCCEEEecc----CChHHHHHHHHHcCCCC
Confidence 4457999999999997 69999775531 13333445556677653
No 248
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=51.08 E-value=28 Score=36.49 Aligned_cols=46 Identities=11% Similarity=0.103 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE-eecCCCCCChHHHHHHHHcCC
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVV-NISMIAIMPSLSSRIINRYKM 154 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~-~~s~~~~~Ps~a~~i~~~lgl 154 (465)
-..++++++|+++|++|+|||.+.. .+++..--+.-+..|.+.+|-
T Consensus 276 ~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg~ 322 (405)
T PRK09116 276 TMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFGA 322 (405)
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhCC
Confidence 3468999999999999999999875 454433344555667777773
No 249
>PLN03168 chalcone synthase; Provisional
Probab=50.60 E-value=35 Score=35.65 Aligned_cols=72 Identities=19% Similarity=0.145 Sum_probs=45.3
Q ss_pred CCcCCCCCccCCccEEEecCCC----HHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCE
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGG----KAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDR 395 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~----~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~ 395 (465)
+++|+. ++|||++++.... +..--.++++||+++.-. +. --.|+++++-.+.|..+..-=+-.++.+
T Consensus 114 ~~ag~~---~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~---r~---~d~~~gC~g~~~aL~~A~~~i~~~~~~~ 184 (389)
T PLN03168 114 KEWGGR---KSDITHIVFATTSGVNMPGADHALAKLLGLKPTVK---RV---MMYQTGCFGGASVLRVAKDLAENNKGAR 184 (389)
T ss_pred HHcCCC---HHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcce---ee---eeeCCccHHHHHHHHHHHHHHHhCCCCE
Confidence 457777 5899999877433 345567899999986421 00 1256788888888865422111245677
Q ss_pred EEEEe
Q 039047 396 VLMIS 400 (465)
Q Consensus 396 vl~~s 400 (465)
||+++
T Consensus 185 VLVV~ 189 (389)
T PLN03168 185 VLAVA 189 (389)
T ss_pred EEEEE
Confidence 77665
No 250
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=50.52 E-value=85 Score=33.23 Aligned_cols=42 Identities=12% Similarity=0.186 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHcCCC--cCCcCEEEEe-ecCCCCCChHHHHHHHHcCCCC
Q 039047 110 FEDSIAKILDRSGIS--PKEIDILVVN-ISMIAIMPSLSSRIINRYKMRK 156 (465)
Q Consensus 110 a~~Aa~~aL~~agi~--~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl~~ 156 (465)
...|+++|++++|++ ++|||++=+. + .+...-...+.||+.+
T Consensus 295 ~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~-----Fa~~~l~~lE~lGl~~ 339 (430)
T PRK06365 295 GRMAAKEAYEMAGITDPLNDLDLIELHDA-----YTSSEIQTYEDLGLCK 339 (430)
T ss_pred HHHHHHHHHHHcCCCCCHHHCCEEEeecC-----CcHHHHHHHHHcCCCC
Confidence 347999999999997 7999988654 3 2233344556666653
No 251
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=50.37 E-value=40 Score=34.93 Aligned_cols=78 Identities=15% Similarity=0.152 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCCC----CCceee----eecCCcchHHHHHHHHH
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKMR----KDIKVF----NLTGMGCSASLISVDIV 178 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl~----~~~~~~----~l~~~gCs~~~~al~~A 178 (465)
+-...+++++|+++|++++|||.+... ++.....+.-...+..-++-. ..++.. .+.....++++..+-.+
T Consensus 279 ~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~ 358 (421)
T cd00833 279 EAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKV 358 (421)
T ss_pred HHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHH
Confidence 445689999999999999999999864 432222222233444444321 011111 12223455556556555
Q ss_pred HHHHhcC
Q 039047 179 RSVFKTY 185 (465)
Q Consensus 179 ~~ll~~g 185 (465)
...++.+
T Consensus 359 ~~~l~~~ 365 (421)
T cd00833 359 VLALEHG 365 (421)
T ss_pred HHHHhcC
Confidence 5566654
No 252
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=50.26 E-value=30 Score=36.27 Aligned_cols=45 Identities=18% Similarity=0.118 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEE-eecCCCCCChHHHHHHHHcC
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVV-NISMIAIMPSLSSRIINRYK 153 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~-~~s~~~~~Ps~a~~i~~~lg 153 (465)
-..+|++++|+++|++|+|||.|-. .+.+...-+.-...+...+|
T Consensus 289 ~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 289 GARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 3578899999999999999999865 34332223334456666676
No 253
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=50.24 E-value=78 Score=33.48 Aligned_cols=25 Identities=20% Similarity=0.452 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEe
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVN 134 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~ 134 (465)
...|++++|+++|++|+|||.|-..
T Consensus 301 ~~~a~~~Al~~Agi~~~dId~ve~h 325 (437)
T PLN02836 301 AVLAMTRALQQSGLHPNQVDYVNAH 325 (437)
T ss_pred HHHHHHHHHHHcCCCHhHcCEEEcc
Confidence 4678999999999999999998753
No 254
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=50.11 E-value=37 Score=35.76 Aligned_cols=45 Identities=13% Similarity=0.150 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEE-eecCCCCCChHHHHHHHHcCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVV-NISMIAIMPSLSSRIINRYKM 154 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~-~~s~~~~~Ps~a~~i~~~lgl 154 (465)
..++++++|+++|++|+|||.+-. .+++..--+.-...|.+-||-
T Consensus 288 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 568999999999999999999865 344333344455667777774
No 255
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=48.39 E-value=31 Score=34.92 Aligned_cols=33 Identities=21% Similarity=0.255 Sum_probs=26.2
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCC
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMI 138 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~ 138 (465)
..+.+ ...++++|+++|++++|||.|.++..|.
T Consensus 45 H~~~l-~~~i~~~l~~~~~~~~did~Iavt~gPg 77 (322)
T TIGR03722 45 HAEVA-PKLIKEALEEAGVSLEDIDAVAFSQGPG 77 (322)
T ss_pred HHHHH-HHHHHHHHHHcCCCHHHCCEEEEecCCc
Confidence 33344 4449999999999999999999987654
No 256
>PLN03172 chalcone synthase family protein; Provisional
Probab=46.11 E-value=47 Score=34.71 Aligned_cols=68 Identities=12% Similarity=0.186 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCcee-----e-eecCCcchHHHHHHHHH
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKV-----F-NLTGMGCSASLISVDIV 178 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~-----~-~l~~~gCs~~~~al~~A 178 (465)
..-....++++|+++|++..|||..++.. ..+.+-..+.++||++++-.. + +..+|+.++-+.+|+..
T Consensus 276 ~~~i~~~~~~~L~~~gl~~~di~~~~~Hq----gg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (393)
T PLN03172 276 SKNIEKSLVEAFAPIGINDWNSIFWIAHP----GGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEM 349 (393)
T ss_pred HHHHHHHHHHHhhhcCCCccccceEEecC----CcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 44455566788999999999999866543 244566788999999864322 2 33445555666666544
No 257
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=45.66 E-value=1.2e+02 Score=31.71 Aligned_cols=43 Identities=12% Similarity=0.129 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHcCCC--cCCcCEEEEeecCCCCCChHHHHHHHHcCCCC
Q 039047 110 FEDSIAKILDRSGIS--PKEIDILVVNISMIAIMPSLSSRIINRYKMRK 156 (465)
Q Consensus 110 a~~Aa~~aL~~agi~--~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~ 156 (465)
...|++++++++|++ ++|||++=+.- ......-...+.||+.+
T Consensus 268 ~~~aa~~a~~~AGl~~~~~Did~~Ei~D----~Fs~~~l~~~e~lGl~~ 312 (398)
T PRK06157 268 TRIAARKAYREAGITDPREELSMAEVHD----CFSITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHHcCCCCchhcCCEEEEec----CChHHHHHHHHHcCCCC
Confidence 457999999999998 79999885542 12333455556777654
No 258
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=44.61 E-value=69 Score=32.97 Aligned_cols=57 Identities=9% Similarity=0.149 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCCh--HHHHHHHHcCCCCCceeeeecC
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPS--LSSRIINRYKMRKDIKVFNLTG 165 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps--~a~~i~~~lgl~~~~~~~~l~~ 165 (465)
+-....++++|+++|++++|||.|.++..|.. .++ .....++.|...-+++.+.++.
T Consensus 51 ~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl-~~~LrVG~~~Ak~LA~a~~~PligV~H 109 (345)
T PTZ00340 51 EHILSLVKEALEEAKITPSDISLICYTKGPGM-GAPLSVGAVVARTLSLLWGKPLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCc-HhhHHHHHHHHHHHHHHcCCCEeecch
Confidence 34466789999999999999999998876663 232 2233333333333456677764
No 259
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=41.59 E-value=46 Score=36.10 Aligned_cols=61 Identities=11% Similarity=0.158 Sum_probs=39.2
Q ss_pred hhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC-----hHHHHHHHHcCCCCCceeeeecCCcc
Q 039047 103 IDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMP-----SLSSRIINRYKMRKDIKVFNLTGMGC 168 (465)
Q Consensus 103 ~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~P-----s~a~~i~~~lgl~~~~~~~~l~~~gC 168 (465)
+...+.+. .+++++|+++|++++|||.|.++..|..... +.+.-++..+| ++.+.++.+-|
T Consensus 46 ~~H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~~~~l~vg~~~ak~la~~~~----~~~~~v~h~~a 111 (535)
T PRK09605 46 EHHAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGLGPCLRVVATAARALALSLD----VPLIGVNHCVA 111 (535)
T ss_pred HHHHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCcHhhHHHHHHHHHHHHHHhC----CCeecccHHHH
Confidence 33444444 8899999999999999999998876664322 22333444444 44555554333
No 260
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=41.11 E-value=1.2e+02 Score=31.56 Aligned_cols=42 Identities=17% Similarity=0.150 Sum_probs=29.1
Q ss_pred HHHHHHHHHHcCCC--cCCcCEEEEeecCCCCCChHHHHHHHHcCCCC
Q 039047 111 EDSIAKILDRSGIS--PKEIDILVVNISMIAIMPSLSSRIINRYKMRK 156 (465)
Q Consensus 111 ~~Aa~~aL~~agi~--~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~ 156 (465)
..|++++++++|++ ++|||++-+.- ......-...+.||+.+
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D----~Ft~~~l~~~e~lG~~~ 302 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDD----RYSYKELQHIEALRLSE 302 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEec----CChHHHHHHHHHcCCCC
Confidence 36999999999997 69999887651 12233345556666653
No 261
>PLN03171 chalcone synthase-like protein; Provisional
Probab=41.10 E-value=1.1e+02 Score=32.11 Aligned_cols=71 Identities=11% Similarity=0.108 Sum_probs=45.6
Q ss_pred hhHHHHHHHHHHHHHHH---------cCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCcee------eeecCCcc
Q 039047 104 DEMEEFFEDSIAKILDR---------SGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKV------FNLTGMGC 168 (465)
Q Consensus 104 ~e~~~la~~Aa~~aL~~---------agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~------~~l~~~gC 168 (465)
++...+..+++++++++ +|++++|||.+++ + ..+.+-..+.++||++++-.. -+..++++
T Consensus 275 ~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~H---q--~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtss 349 (399)
T PLN03171 275 RQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAVH---P--GSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFG 349 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEEc---C--CcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchh
Confidence 45566776677777765 5888899987642 1 123566788999999864322 24455566
Q ss_pred hHHHHHHHHHH
Q 039047 169 SASLISVDIVR 179 (465)
Q Consensus 169 s~~~~al~~A~ 179 (465)
++-..+|+.+.
T Consensus 350 aSip~~L~~~~ 360 (399)
T PLN03171 350 ATVIFALDELR 360 (399)
T ss_pred hhHHHHHHHHH
Confidence 66666776543
No 262
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=40.00 E-value=23 Score=33.69 Aligned_cols=36 Identities=36% Similarity=0.402 Sum_probs=28.0
Q ss_pred cHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhhee
Q 039047 375 ASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSC 410 (465)
Q Consensus 375 asi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~ 410 (465)
-|-|...+.+.+.-.+++||+||=||-|+|+..+.+
T Consensus 55 is~P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aAvl 90 (209)
T COG2518 55 ISAPHMVARMLQLLELKPGDRVLEIGTGSGYQAAVL 90 (209)
T ss_pred ecCcHHHHHHHHHhCCCCCCeEEEECCCchHHHHHH
Confidence 344555677777678999999999999999976543
No 263
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=38.82 E-value=30 Score=34.12 Aligned_cols=28 Identities=11% Similarity=0.472 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEe
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVN 134 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~ 134 (465)
-+|...|++++++++|+.|.||++|=..
T Consensus 271 fdm~~~aa~~l~aksgltpndvqvielh 298 (408)
T KOG1406|consen 271 FDMTRLAAKRLFAKSGLTPNDVQVIELH 298 (408)
T ss_pred chHHHHHHHHHHHHcCCCcccceEEEee
Confidence 5788999999999999999999988653
No 264
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=38.81 E-value=2.7e+02 Score=26.81 Aligned_cols=101 Identities=14% Similarity=0.169 Sum_probs=65.7
Q ss_pred CcchHHHHHHHHHHcCccceEeecCccccCCCCCCChhhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC
Q 039047 63 GLNEYKFLLKAIVSSGIGEQTYSPRIMFAGREDNPTLQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMP 142 (465)
Q Consensus 63 ~~~~~~f~~ki~~~sGI~~r~~~~~~~~~~~~~~~t~~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~P 142 (465)
.++....++.+.++-|+.+.+..-... ..+ .-.++.-.++++.+....+++++++ +.-|+++.+|.+ +-
T Consensus 118 t~rs~~il~~lv~~~g~s~~~~~vrst-dl~--vL~l~~~~~~~~~~l~~~~~~a~~e-----dgAeaIiLGCAG---ms 186 (230)
T COG4126 118 TERSRPILEELVRSYGLSRHCRSVRST-DLP--VLALEGPPEEAEALLVIEAAEALKE-----DGAEAIILGCAG---MS 186 (230)
T ss_pred CcccHHHHHHHHHhcCccccccceeeC-CCC--cccccCChHHHHHHHHHHHHHHhhh-----cCCCEEEEcCcc---HH
Confidence 455666778888899998876532211 000 0123333456777888888888865 456788888853 44
Q ss_pred hHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhcC
Q 039047 143 SLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKTY 185 (465)
Q Consensus 143 s~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~g 185 (465)
+++.+++..+|++ ..| +-..|+.+|..+++.+
T Consensus 187 ~la~~Lq~~~gvP----VID-------gv~Aav~~a~~L~~~~ 218 (230)
T COG4126 187 DLADQLQKAFGVP----VID-------GVAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHHHHHhCCC----ccc-------chHHHHHHHHHHHhhc
Confidence 6799999999964 222 2456677888888765
No 265
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=38.69 E-value=62 Score=32.68 Aligned_cols=90 Identities=16% Similarity=0.308 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCC-------ceeeeec---------CCcchH
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKD-------IKVFNLT---------GMGCSA 170 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~-------~~~~~l~---------~~gCs~ 170 (465)
..-|++.+..=|++.|.+|+|-|+||..- .....-.+...+.++-|+.-. +..||.. |-|||+
T Consensus 202 APAA~dTI~~h~~D~g~~p~dYDlIvTGD-Lg~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGcgCSA 280 (329)
T PF07451_consen 202 APAAADTIEQHFKDTGRSPDDYDLIVTGD-LGKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGCGCSA 280 (329)
T ss_dssp HHHHHHHHHHHHHHCT--GGG-SEEEESS--HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESHHHHH
T ss_pred hHHHHHHHHHHHHHhCCChhhcCeEEecc-hHHHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCcchHH
Confidence 34456667777999999999999988752 111122344555555555411 1122222 235555
Q ss_pred HHHHHHHHHHHHhcCCCCEEEEEEecCC
Q 039047 171 SLISVDIVRSVFKTYKNMNAMVVTSESL 198 (465)
Q Consensus 171 ~~~al~~A~~ll~~g~~~~aLVV~~E~~ 198 (465)
.+..=.+- ..|+.|..+++|+|++-.+
T Consensus 281 ~V~~g~ll-~~l~~g~~krvL~vaTGAL 307 (329)
T PF07451_consen 281 VVLCGYLL-PKLRKGELKRVLFVATGAL 307 (329)
T ss_dssp HHHHHCHH-HHHHTTS-SEEEEEEEEE-
T ss_pred HHHHHHHH-HHHHcCCceEEEEEEchhh
Confidence 55444333 3445677899999988764
No 266
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=38.65 E-value=70 Score=33.18 Aligned_cols=77 Identities=18% Similarity=0.308 Sum_probs=48.3
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCC--------hHHHHHHHHcCCCC--CceeeeecCCcc
Q 039047 99 LQDGIDEMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMP--------SLSSRIINRYKMRK--DIKVFNLTGMGC 168 (465)
Q Consensus 99 ~~~~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~P--------s~a~~i~~~lgl~~--~~~~~~l~~~gC 168 (465)
+.+...+.-++..+|++++++++++++++||+|=..-.+-+..| .-.+.|++++|++- |.+.-|+.-.|-
T Consensus 62 l~~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~VV~DFR~~D~a~GGq 141 (365)
T PRK09585 62 LAELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITVVADFRRRDVAAGGQ 141 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCEEecChHHHHhcCCC
Confidence 33444566788899999999999999999998876422222222 23577888888762 334444443333
Q ss_pred hHHHHHH
Q 039047 169 SASLISV 175 (465)
Q Consensus 169 s~~~~al 175 (465)
.+-+..+
T Consensus 142 GAPLvp~ 148 (365)
T PRK09585 142 GAPLVPA 148 (365)
T ss_pred CCCchHH
Confidence 4444433
No 267
>PRK08329 threonine synthase; Validated
Probab=37.09 E-value=59 Score=33.26 Aligned_cols=64 Identities=20% Similarity=0.277 Sum_probs=45.9
Q ss_pred HHHHHHHhh----CCCCcccchhHHHHHhhhc---cccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhh
Q 039047 343 AVIDGIGFS----LDLTEYDLEPARMTLHRFG---NTSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFK 406 (465)
Q Consensus 343 ~ii~~i~~~----Lgl~~e~~~~s~~~l~~~G---Ntssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~ 406 (465)
..++.+.+. ..++++++..+...|.+.| -.+|+..+..+..+.++|.+++|++|+++--|.|++
T Consensus 275 ~~~~~l~~~~g~~~~V~d~e~~~a~~~l~~~Gi~vepssa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~glK 345 (347)
T PRK08329 275 EMLRALEESNGFCISVGEEETRAALHWLRRMGFLVEPTSAVALAAYWKLLEEGLIEGGSKVLLPLSGSGLK 345 (347)
T ss_pred HHHHHHHHhCCEEEEECHHHHHHHHHHHHhcCceECccHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcc
Confidence 345555554 5678777765544555443 234677777777888899999999999999999986
No 268
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=36.31 E-value=2e+02 Score=29.02 Aligned_cols=111 Identities=14% Similarity=0.136 Sum_probs=64.8
Q ss_pred HHHHHHHHHHHHHHcCCCcCC-cCEEEEeecC-CCC--CChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHH
Q 039047 107 EEFFEDSIAKILDRSGISPKE-IDILVVNISM-IAI--MPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVF 182 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~d-Id~li~~~s~-~~~--~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll 182 (465)
.+=..+++++|++++|++++. +..|.+.-|. +.. .--+-..+.+++.- -+..|-++. +....+.
T Consensus 46 ~~rie~~i~~A~~k~g~d~~~~lr~lgL~lSg~d~e~~~~~lv~~~R~~fps--~ae~~~v~s----------Da~~sl~ 113 (336)
T KOG1794|consen 46 ASRIEDMIREAKEKAGWDKKGPLRSLGLGLSGTDQEDKNRKLVTEFRDKFPS--VAENFYVTS----------DADGSLA 113 (336)
T ss_pred HHHHHHHHHHHHhhcCCCccCccceeeeecccCCchhHHHHHHHHHHHhccc--hhheeeeeh----------hHHHHHh
Confidence 344467789999999999999 8888876442 221 11244455555442 356677765 2233333
Q ss_pred hc---CCCCEEEEEEecCCCCCCCC-CCCccchhhhhhccccceEEEEecC
Q 039047 183 KT---YKNMNAMVVTSESLSPNWYS-GNDRSMILANCLFRSGGAVILLSNK 229 (465)
Q Consensus 183 ~~---g~~~~aLVV~~E~~s~~~~~-~~dr~~~~~~~lfgDGaaA~lLs~~ 229 (465)
.+ +....||+-++...-+.+.+ +.....-......|||++|.-+++.
T Consensus 114 a~t~g~~~GiVLiaGTgs~crl~~~DGs~~~~ggwg~~iGd~GSaywia~~ 164 (336)
T KOG1794|consen 114 AATPGGEGGIVLIAGTGSNCRLVNPDGSEKGAGGWGHMIGDGGSAYWIARQ 164 (336)
T ss_pred hcCCCCCCcEEEEecCCceeEEECCCCCccCCCCCCCccCCCcchhhhhhh
Confidence 33 23677888888876553222 2211111124577999998877664
No 269
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=35.49 E-value=2.1e+02 Score=31.63 Aligned_cols=48 Identities=17% Similarity=0.152 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCC
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMR 155 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~ 155 (465)
.+=..+.++++|+++|+++++||.|++... ...+|.+..+|.+.+|..
T Consensus 292 l~~i~~~i~~~L~~a~~~~~~id~ViLvGG-ssriP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 292 VQKTLSICRRALRDAGLSVEEIKGVVLVGG-STRMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHHHHcCCChhhCCEEEEECC-cCCChHHHHHHHHHhCCC
Confidence 333456778999999999999999986431 236899999999999864
No 270
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=35.42 E-value=1.2e+02 Score=31.07 Aligned_cols=73 Identities=12% Similarity=0.137 Sum_probs=45.1
Q ss_pred hhhHHHHHHHHHHHHHHHcCC-CcCCcCEEEEeecCCCCCChHHHHHHHH--cCCCCCceeeeecCCcchHHHHHHHHHH
Q 039047 103 IDEMEEFFEDSIAKILDRSGI-SPKEIDILVVNISMIAIMPSLSSRIINR--YKMRKDIKVFNLTGMGCSASLISVDIVR 179 (465)
Q Consensus 103 ~~e~~~la~~Aa~~aL~~agi-~~~dId~li~~~s~~~~~Ps~a~~i~~~--lgl~~~~~~~~l~~~gCs~~~~al~~A~ 179 (465)
+....+...+|++++++++|| +|.|+-.|-+=| |.++. ..|... =|-. -+..-....|+=|-+..||-+|-
T Consensus 127 r~aqV~~vA~aV~~aM~~AGI~dpaDVH~VQvKc----PLLT~-~~i~~A~~RG~~-~~t~dt~~SM~~SrgASALGvAv 200 (365)
T PF09663_consen 127 RMAQVEEVAAAVRAAMADAGITDPADVHFVQVKC----PLLTS-ERIADAKARGKT-VATEDTYESMAYSRGASALGVAV 200 (365)
T ss_pred cHHHHHHHHHHHHHHHHHcCCCChhheeeEEecC----CcCCH-HHHHHHHhCCCc-eeecccccccccccchhHHHHHH
Confidence 334577788999999999999 888887665545 33332 223221 2322 12222333467777777888877
Q ss_pred HH
Q 039047 180 SV 181 (465)
Q Consensus 180 ~l 181 (465)
.|
T Consensus 201 AL 202 (365)
T PF09663_consen 201 AL 202 (365)
T ss_pred Hh
Confidence 76
No 271
>PLN02854 3-ketoacyl-CoA synthase
Probab=34.68 E-value=1.7e+02 Score=31.89 Aligned_cols=42 Identities=7% Similarity=0.188 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHcCCCc------CCcCEEEEeecCCCCCChHHHHHHHHcCCC
Q 039047 110 FEDSIAKILDRSGISP------KEIDILVVNISMIAIMPSLSSRIINRYKMR 155 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~------~dId~li~~~s~~~~~Ps~a~~i~~~lgl~ 155 (465)
+...+++.|+++|+++ ++||+.+... .....-..++++||++
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHq----ggr~IId~v~k~LgL~ 434 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHA----GGRAVLDELQKNLQLS 434 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECC----CCHHHHHHHHHHcCCC
Confidence 5778899999999987 5898877643 2335567889999997
No 272
>PRK13410 molecular chaperone DnaK; Provisional
Probab=34.45 E-value=1.3e+02 Score=33.97 Aligned_cols=50 Identities=18% Similarity=0.298 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCC
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMR 155 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~ 155 (465)
+-.+-..+.++++|+++|+++++||.|++... ...+|.+...|.+.+|..
T Consensus 306 ~l~~r~~~~i~~~L~~ag~~~~dId~VvLVGG-ssRiP~V~~~l~~~fg~~ 355 (668)
T PRK13410 306 DLLDRLLRPVKRALKDAGLSPEDIDEVVLVGG-STRMPMVQQLVRTLIPRE 355 (668)
T ss_pred HHHHHHHHHHHHHHHHcCCChhhCcEEEEECC-ccccHHHHHHHHHHcCCC
Confidence 33444556688999999999999999886532 235899999999998854
No 273
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=34.12 E-value=52 Score=33.93 Aligned_cols=45 Identities=18% Similarity=0.166 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEE-EeecCCCCCChHHHHHHHHcCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILV-VNISMIAIMPSLSSRIINRYKM 154 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li-~~~s~~~~~Ps~a~~i~~~lgl 154 (465)
+..|.+++|+++|+.|+|||.|= +++|+..---.-+..|.+-|+-
T Consensus 303 a~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 303 AVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGE 348 (440)
T ss_pred HHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhcc
Confidence 57789999999999999999886 3555332222233445555553
No 274
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=33.94 E-value=2e+02 Score=29.43 Aligned_cols=92 Identities=20% Similarity=0.326 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCC--C---C--ceeeee--------cCCcchHH
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMR--K---D--IKVFNL--------TGMGCSAS 171 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~--~---~--~~~~~l--------~~~gCs~~ 171 (465)
..-|++.+.+=|++.|.+|++-|+|+..- .....-.+...+..+-|+. + | ...||- +|-|||+.
T Consensus 201 apaa~dti~~h~~d~~~~~~~yd~i~tgd-lg~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~ 279 (327)
T TIGR02845 201 APAAADTIEAHFKDTGRSVDDYDLIVTGD-LARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAV 279 (327)
T ss_pred hHHHHHHHHHHHHHcCCChhhccEEEecc-hHHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHH
Confidence 34566777788999999999999888652 1111223344444443432 0 1 123322 22355655
Q ss_pred HHHHHHHHHHHhcCCCCEEEEEEecCC-CC
Q 039047 172 LISVDIVRSVFKTYKNMNAMVVTSESL-SP 200 (465)
Q Consensus 172 ~~al~~A~~ll~~g~~~~aLVV~~E~~-s~ 200 (465)
+..=.+- ..++.|..+++|+|++-.+ |+
T Consensus 280 v~~~~~~-~~~~~g~~~r~l~v~tgalls~ 308 (327)
T TIGR02845 280 VTYGHIL-KEMLRGKLKKVLVVATGALLSP 308 (327)
T ss_pred HHHHHHH-HHHhcCcceEEEEEEchhhcCc
Confidence 5443333 3445677899999998774 54
No 275
>PRK06059 lipid-transfer protein; Provisional
Probab=33.88 E-value=1.4e+02 Score=30.98 Aligned_cols=90 Identities=13% Similarity=0.014 Sum_probs=49.8
Q ss_pred CCcCCCCCccCCccEEEecCCCHHHHHHHHhhCCCCcc------------------cchhHHHHHhhhccccccHHHHHH
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGGKAVIDGIGFSLDLTEY------------------DLEPARMTLHRFGNTSAASLWYVL 381 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~~~ii~~i~~~Lgl~~e------------------~~~~s~~~l~~~GNtssasi~~~L 381 (465)
+++|+. .+|||.+-+|-.-....-...+.|||.+. .+.++ =-+--+||...++=...+
T Consensus 284 ~~agl~---~~Did~~El~d~f~~~~l~~~e~lGl~~~G~~~~~~~~G~~~~~G~~pvN~~-GG~la~Ghp~gatG~~~~ 359 (399)
T PRK06059 284 AEAGIG---PEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGGRIPVNPS-GGLACFGEAIPAQAIAQV 359 (399)
T ss_pred HHcCCC---HHHCcEEeecccChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCC-CccccCCccCCccHHHHH
Confidence 347777 48999999997754444444599999863 22211 012336887766665555
Q ss_pred HHHHHc--C-----CCCCCCEEEEEeeCchhhhheeeeE
Q 039047 382 AYMEAK--K-----RLKKGDRVLMISFGAGFKCNSCVWE 413 (465)
Q Consensus 382 ~~~~~~--g-----~l~~Gd~vl~~sfGaG~~~~~~v~~ 413 (465)
.++..+ | .++...+.+....|.|-..++++++
T Consensus 360 ~e~~~qLrg~ag~~Qv~~a~~gl~~~~g~~g~~~~~~l~ 398 (399)
T PRK06059 360 CELTWQLRGQAGGRQVEGARVGITANQGLFGHGSSVIVA 398 (399)
T ss_pred HHHHHHhccCcCCccCCCccEEEEeccCCcccceEEEec
Confidence 554331 2 2233344444444444444555553
No 276
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=33.57 E-value=2.2e+02 Score=31.64 Aligned_cols=47 Identities=11% Similarity=0.099 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCC
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMR 155 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~ 155 (465)
+=....++++|+++|+.+++||.|++... ...+|.+...|.+.+|..
T Consensus 309 ~~~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~l~~~fg~~ 355 (616)
T PRK05183 309 KRTLLACRRALRDAGVEADEVKEVVMVGG-STRVPLVREAVGEFFGRT 355 (616)
T ss_pred HHHHHHHHHHHHHcCCCcccCCEEEEECC-cccChHHHHHHHHHhccC
Confidence 33455678999999999999999987531 235899999999999865
No 277
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=32.95 E-value=1.1e+02 Score=32.09 Aligned_cols=24 Identities=29% Similarity=0.511 Sum_probs=21.3
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEe
Q 039047 111 EDSIAKILDRSGISPKEIDILVVN 134 (465)
Q Consensus 111 ~~Aa~~aL~~agi~~~dId~li~~ 134 (465)
.++++++|+++|++|+|||.+-..
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~h 307 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPH 307 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEcc
Confidence 578999999999999999988753
No 278
>PLN00415 3-ketoacyl-CoA synthase
Probab=32.45 E-value=1.4e+02 Score=32.08 Aligned_cols=72 Identities=7% Similarity=0.016 Sum_probs=43.5
Q ss_pred CCcCCCCCccCCccEEEecCCC----HHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCE
Q 039047 320 GEKKAGVNFRTGVDHFCIHTGG----KAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDR 395 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~~----~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~ 395 (465)
+++|+.| +|||+++....+ +..--.+.+++|+++. +. +. ..+.+|++.-.+.|..+.+-=+..++.+
T Consensus 147 ~~aGi~p---~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~-v~--~~---dL~gmGCsggv~aL~lA~~ll~a~~~~~ 217 (466)
T PLN00415 147 KKTGIEP---REVGIFIVNCSLFNPNPSLSSMIVNRYKLKTD-VK--TY---NLSGMGCSAGAISVDLATNLLKANPNTY 217 (466)
T ss_pred HHcCCCH---HHCCEEEEECcCCCCCchHHHHHHHHhCCCCC-ce--EE---EeccccchHHHHHHHHHHHHHHhCCCCE
Confidence 3467774 899999876333 3455668999999843 31 11 3455666666666654322112346777
Q ss_pred EEEEe
Q 039047 396 VLMIS 400 (465)
Q Consensus 396 vl~~s 400 (465)
+++++
T Consensus 218 aLVVs 222 (466)
T PLN00415 218 AVIVS 222 (466)
T ss_pred EEEEE
Confidence 77665
No 279
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=30.79 E-value=74 Score=33.17 Aligned_cols=41 Identities=10% Similarity=0.049 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEe-ecCCCCCChHHHHHHHHcCC
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVVN-ISMIAIMPSLSSRIINRYKM 154 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~~-~s~~~~~Ps~a~~i~~~lgl 154 (465)
....|++++++++|++|+|||++=+. | ++...-+..+.||+
T Consensus 256 ~~~~aa~~a~~~AGi~~~did~~elyD~-----Fs~~~~~~~E~lGl 297 (388)
T PRK08142 256 GAAWSGPAAFAEAGVTPADIKYASIYDS-----FTITVLMQLEDLGF 297 (388)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEecc-----chHHHHHHHHHcCC
Confidence 34679999999999999999977543 3 23333444566666
No 280
>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=30.21 E-value=67 Score=26.15 Aligned_cols=31 Identities=10% Similarity=0.119 Sum_probs=17.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcccCCCceE
Q 039047 2 GLLFYLYLLPSLYLMFKIWKWVDEKRDKECY 32 (465)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~v~ 32 (465)
..+.+..+++++++++.++-..++|..+++|
T Consensus 36 ~~lvI~~iFil~VilwfvCC~kRkrsRrPIY 66 (94)
T PF05393_consen 36 WFLVICGIFILLVILWFVCCKKRKRSRRPIY 66 (94)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhccCCcc
Confidence 3344444455556666666665666666665
No 281
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=28.54 E-value=78 Score=31.20 Aligned_cols=49 Identities=27% Similarity=0.472 Sum_probs=28.7
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecC
Q 039047 111 EDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTG 165 (465)
Q Consensus 111 ~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~ 165 (465)
+.|++.+|+++|++-+|||++=+|-. ..|. .-.+++.|+++ +.-.+++|
T Consensus 296 vPAI~~vLKksGlkl~DiDl~EvNEA---FApQ-~LAv~r~L~ld--~sKlNVNG 344 (396)
T KOG1391|consen 296 VPAISGVLKKSGLKLKDIDLVEVNEA---FAPQ-YLAVERSLDLD--ISKLNVNG 344 (396)
T ss_pred cHHHHHHHHHcCCcccccceEEechh---hchH-HHHHHHhhCCC--hhhccccC
Confidence 35677777777777777777766531 1222 23355666663 45566665
No 282
>PF06924 DUF1281: Protein of unknown function (DUF1281); InterPro: IPR009694 This family consists of several hypothetical enterobacterial proteins of around 170 residues in length. Members of this family are found in Escherichia coli, Salmonella typhimurium and Shigella species. The function of this family is unknown.; PDB: 2IJR_A.
Probab=27.79 E-value=23 Score=31.09 Aligned_cols=37 Identities=14% Similarity=0.180 Sum_probs=26.6
Q ss_pred CHHHHHHHHHhhccCCcchHHHHHHHHHHcCccceEe
Q 039047 48 STDFAGQVIKRTKNLGLNEYKFLLKAIVSSGIGEQTY 84 (465)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~f~~ki~~~sGI~~r~~ 84 (465)
-.+..++.+.....++++..+.++++...|||+.+++
T Consensus 72 AF~~Wl~lL~~~~~Ld~~~~~~i~~l~~QSGi~~~~W 108 (134)
T PF06924_consen 72 AFTQWLGLLQKDVWLDPETCRRIHRLWLQSGIGARRW 108 (134)
T ss_dssp HHHHHHHHHHTT-B-SSHHHHHHHHHHHTT-GGG--T
T ss_pred cHHHHHHHHHhCCcCCHHHHHHHHHHHHHcCcccccc
Confidence 4456667777777889999999999999999999986
No 283
>PLN03184 chloroplast Hsp70; Provisional
Probab=26.86 E-value=1.9e+02 Score=32.62 Aligned_cols=47 Identities=13% Similarity=0.164 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCC
Q 039047 108 EFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMR 155 (465)
Q Consensus 108 ~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~ 155 (465)
+=....++++|+++++++++||.|++... ...+|.+..+|.+.+|..
T Consensus 346 ~r~~~~i~~~L~~a~~~~~dId~ViLvGG-ssriP~V~~~i~~~fg~~ 392 (673)
T PLN03184 346 DRCKTPVENALRDAKLSFKDIDEVILVGG-STRIPAVQELVKKLTGKD 392 (673)
T ss_pred HHHHHHHHHHHHHcCCChhHccEEEEECC-ccccHHHHHHHHHHhCCC
Confidence 33455678899999999999999987531 235899999999999864
No 284
>PLN02932 3-ketoacyl-CoA synthase
Probab=26.64 E-value=1.2e+02 Score=32.61 Aligned_cols=56 Identities=4% Similarity=0.047 Sum_probs=36.9
Q ss_pred CCcCCCCCccCCccEEEecCC----CHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHH
Q 039047 320 GEKKAGVNFRTGVDHFCIHTG----GKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYM 384 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~~----~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~ 384 (465)
+++|+.| +|||+++.... .+..--.+.++||++++-. .. ..+-++++.-++.|..+
T Consensus 161 ~~agi~p---~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~---~f---dL~gmGCSggl~aL~lA 220 (478)
T PLN02932 161 RNTGISP---SDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIK---SL---NLGGMGCSAGVIAIDAA 220 (478)
T ss_pred HHcCCCH---HHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCce---EE---EeccchhhhHHHHHHHH
Confidence 4577774 89999977632 3456677899999974322 11 34557777777777643
No 285
>CHL00094 dnaK heat shock protein 70
Probab=26.41 E-value=2e+02 Score=31.99 Aligned_cols=46 Identities=11% Similarity=0.153 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCC
Q 039047 109 FFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMR 155 (465)
Q Consensus 109 la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~ 155 (465)
-....++++|+++|+++++||.|++... ....|.+...+.+.+|..
T Consensus 310 ~~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~l~~~fg~~ 355 (621)
T CHL00094 310 RCRIPVENALKDAKLDKSDIDEVVLVGG-STRIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHHcCCChhhCcEEEEECC-ccCChHHHHHHHHHhCCC
Confidence 3345578999999999999999987532 246899999999999854
No 286
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=26.14 E-value=1.1e+02 Score=25.77 Aligned_cols=60 Identities=18% Similarity=0.112 Sum_probs=30.6
Q ss_pred CcCCCCCccCCccEEEecCCCHHHHHHH-----HhhCCCCc--ccchhHHHHHhhhccccccHHHHHHHHH
Q 039047 321 EKKAGVNFRTGVDHFCIHTGGKAVIDGI-----GFSLDLTE--YDLEPARMTLHRFGNTSAASLWYVLAYM 384 (465)
Q Consensus 321 ~~g~~~~~~~did~~~~H~~~~~ii~~i-----~~~Lgl~~--e~~~~s~~~l~~~GNtssasi~~~L~~~ 384 (465)
++++. .+|||++..|-.|....|.. .+.++-.. ..+.- -..=..+||+.+++=.+.|...
T Consensus 37 ~agi~---~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v-~s~K~~~Gh~~~asG~~~l~~~ 103 (119)
T PF02801_consen 37 DAGIS---PEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPV-GSVKSNIGHTEAASGLLSLAKA 103 (119)
T ss_dssp HHTS----GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEE-E-THHHH-B-GGGHHHHHHHHH
T ss_pred hhccc---cccceeeeeeccccccchhhhhhhhhhhhcccccccccce-eccccccccccccchHHHHHHH
Confidence 46677 48999999997777665543 33333221 01110 1222578999999988888653
No 287
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=25.88 E-value=2.4e+02 Score=28.27 Aligned_cols=79 Identities=6% Similarity=0.028 Sum_probs=49.8
Q ss_pred HHHHHhccCCcCCcCCCCCccCCccEEEec----CCCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHH
Q 039047 309 FVRKMSNNTPKGEKKAGVNFRTGVDHFCIH----TGGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYM 384 (465)
Q Consensus 309 v~~~~l~~~~l~~~g~~~~~~~did~~~~H----~~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~ 384 (465)
..++++ +++|+.| +|||-++.+ .+.+.+-..+.+++|+..+-.. . ..+=+|++.-.+.++.+
T Consensus 90 av~~LL-----~ktgv~p---~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~---~---nLsGMGCsAgliai~lA 155 (290)
T PF08392_consen 90 AVDDLL-----AKTGVKP---SDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKS---Y---NLSGMGCSAGLIAIDLA 155 (290)
T ss_pred HHHHHH-----HHcCCCH---HHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeee---e---cccCCcchhhHHHHHHH
Confidence 345555 4578885 799998876 4556788999999999864431 2 34555555555555432
Q ss_pred HHcCCCCCCCEEEEEee
Q 039047 385 EAKKRLKKGDRVLMISF 401 (465)
Q Consensus 385 ~~~g~l~~Gd~vl~~sf 401 (465)
..==+..||..+++++.
T Consensus 156 ~~lL~~~p~~~ALVVst 172 (290)
T PF08392_consen 156 KDLLQAHPNSYALVVST 172 (290)
T ss_pred HHHHHhCCCcEEEEEEE
Confidence 22113467888887763
No 288
>PF11392 DUF2877: Protein of unknown function (DUF2877); InterPro: IPR021530 This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.
Probab=25.72 E-value=96 Score=26.26 Aligned_cols=46 Identities=20% Similarity=0.027 Sum_probs=31.5
Q ss_pred CCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHH
Q 039047 340 GGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYME 385 (465)
Q Consensus 340 ~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~ 385 (465)
.+..+.+.+..-.+-+++.++.+...+-++||+|..+..+.+...+
T Consensus 64 ~~~~~~~l~~~l~~~~~~~~~~~i~~ll~iGhTSG~D~L~Gi~~~l 109 (110)
T PF11392_consen 64 FSEPLLRLLHALSSGDSEDLEEAIRRLLAIGHTSGADTLLGILLGL 109 (110)
T ss_pred chHHHHHHHHHHHcCCchHHHHHHHHHHHcCCCchHHHHHHHHHHh
Confidence 3445555444444444456666678888999999999998887654
No 289
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=24.93 E-value=2.3e+02 Score=31.45 Aligned_cols=48 Identities=17% Similarity=0.219 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCC
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMR 155 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~ 155 (465)
.+=....++++|+++|+++++||.|++... ...+|.+...|.+.+|..
T Consensus 306 ~~~~~~~i~~~l~~a~~~~~~id~ViLvGG-ssriP~v~~~l~~~fg~~ 353 (627)
T PRK00290 306 VERTIEPCKQALKDAGLSVSDIDEVILVGG-STRMPAVQELVKEFFGKE 353 (627)
T ss_pred HHHHHHHHHHHHHHcCCChhhCcEEEEECC-cCCChHHHHHHHHHhCCC
Confidence 334456678999999999999999887531 235899999999999864
No 290
>COG4401 AroH Chorismate mutase [Amino acid transport and metabolism]
Probab=24.87 E-value=1.4e+02 Score=25.42 Aligned_cols=65 Identities=15% Similarity=0.257 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHHHHHcCCCcCCcCEEEEeecCC--CCCChHHHHHHHHcCCCCCceeeeecCCcchHHH
Q 039047 105 EMEEFFEDSIAKILDRSGISPKEIDILVVNISMI--AIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASL 172 (465)
Q Consensus 105 e~~~la~~Aa~~aL~~agi~~~dId~li~~~s~~--~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~ 172 (465)
+..+-..+-.++..++.-.+|+|+--++++.+++ ..+| |..+-..-|.. +++..++..|---+++
T Consensus 19 eI~~at~eLl~~i~~~N~~~pedv~sv~~svT~Dl~A~FP--Aka~R~~~gw~-~Vpv~~~Qem~V~gsL 85 (125)
T COG4401 19 EILDATKELLEEIEEENITDPEDVVSVILSVTEDLDAIFP--AKAVRELPGWE-YVPVMCMQEMPVPGSL 85 (125)
T ss_pred HHHHHHHHHHHHHHHhcCCChhheeeEEEEeccchhhhCc--HHHhccCCCCc-ccceeeeeeccCCCCh
Confidence 3333344445566677789999999999887654 3455 34444555665 7898888875444443
No 291
>TIGR02714 amido_AtzD_TrzD ring-opening amidohydrolases. Members of this family are are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC 3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC 3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyzes the ring-opening of barbituric acid to ureidomalonic acid (see Soong, et al., PubMed:11485332).
Probab=24.76 E-value=2.1e+02 Score=29.23 Aligned_cols=33 Identities=12% Similarity=0.257 Sum_probs=26.0
Q ss_pred hhhHHHHHHHHHHHHHHHcCC-CcCCcCEEEEee
Q 039047 103 IDEMEEFFEDSIAKILDRSGI-SPKEIDILVVNI 135 (465)
Q Consensus 103 ~~e~~~la~~Aa~~aL~~agi-~~~dId~li~~~ 135 (465)
+....+...+|++++++++|| +|.|+-.|=+=|
T Consensus 128 r~aqV~~vA~aV~~AM~~AGI~dpaDVH~VQvKc 161 (366)
T TIGR02714 128 RTAQITETAAAVKRAMRDAGIADPADVHFVQVKC 161 (366)
T ss_pred cHHHHHHHHHHHHHHHHHcCCCChhHeeEEEecC
Confidence 345678889999999999999 788887665544
No 292
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=24.39 E-value=2.7e+02 Score=31.26 Aligned_cols=45 Identities=16% Similarity=0.244 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMR 155 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~ 155 (465)
....++++|+++|+++++||.|++... ...+|.+..+|.+.+|..
T Consensus 336 ~~~~v~~~L~~a~~~~~dId~VvLVGG-ssriP~V~~~l~~~fg~~ 380 (657)
T PTZ00186 336 SIAPCKQCMKDAGVELKEINDVVLVGG-MTRMPKVVEEVKKFFQKD 380 (657)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEECC-cccChHHHHHHHHHhCCC
Confidence 445678899999999999999886421 236899999999999864
No 293
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=24.11 E-value=1.6e+02 Score=30.55 Aligned_cols=34 Identities=18% Similarity=0.459 Sum_probs=30.2
Q ss_pred hhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEee
Q 039047 102 GIDEMEEFFEDSIAKILDRSGISPKEIDILVVNI 135 (465)
Q Consensus 102 ~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~~ 135 (465)
.+|...+|..+...+++++++++.+|+|.||=++
T Consensus 61 tresV~elV~dtl~e~~k~A~l~i~DL~FVVRST 94 (445)
T TIGR03285 61 TRESVAELVKDTLKESLKKAGLDIDDLDFVVRST 94 (445)
T ss_pred cHHHHHHHHHHHHHHHHHHcCCChhhccEEEecc
Confidence 5677789999999999999999999999998654
No 294
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=24.06 E-value=2.1e+02 Score=31.56 Aligned_cols=48 Identities=15% Similarity=0.285 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCC
Q 039047 107 EEFFEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMR 155 (465)
Q Consensus 107 ~~la~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~ 155 (465)
.+=....++++|+++|+++++||.|++... ...+|.+...|.+.+|..
T Consensus 304 ~~~~~~~i~~~l~~a~~~~~~i~~V~LvGG-ssriP~v~~~i~~~f~~~ 351 (595)
T TIGR02350 304 VERTKEPVRQALKDAGLSASDIDEVILVGG-STRIPAVQELVKDFFGKE 351 (595)
T ss_pred HHHHHHHHHHHHHHcCCCHhHCcEEEEECC-cccChHHHHHHHHHhCCc
Confidence 344456678899999999999999987531 235899999999999843
No 295
>KOG3418 consensus 60S ribosomal protein L27 [Translation, ribosomal structure and biogenesis]
Probab=23.09 E-value=1.1e+02 Score=26.95 Aligned_cols=48 Identities=25% Similarity=0.329 Sum_probs=31.2
Q ss_pred CCCCCCEEEEEeeCchhhhh--eeeeEEEecCCC--CCCCCcccccccCCCCCCC
Q 039047 389 RLKKGDRVLMISFGAGFKCN--SCVWEVVRDLDG--NVGNVWKDIIDSYPPQSLA 439 (465)
Q Consensus 389 ~l~~Gd~vl~~sfGaG~~~~--~~v~~~~~~~~~--~~~~~w~~~i~~~p~~~~~ 439 (465)
-++||-.|+..+ |-..| +.+.+...+-.. +-.-.-..+|++||-+...
T Consensus 4 flkPgkvv~v~s---G~yAg~KaVivk~~Ddg~~d~p~~h~LvAgi~ryP~kvt~ 55 (136)
T KOG3418|consen 4 FLKPGKVVLVLS---GRYAGKKAVIVKNIDDGTEDKPYGHALVAGVDRYPRKVTK 55 (136)
T ss_pred cccCCcEEEeec---ccccCccEEEEeecccCCccCCCceeeeeehhhccccccc
Confidence 367887777766 54555 778877666421 1134567899999995443
No 296
>PLN02192 3-ketoacyl-CoA synthase
Probab=23.05 E-value=2.8e+02 Score=30.23 Aligned_cols=72 Identities=8% Similarity=0.065 Sum_probs=44.3
Q ss_pred CCcCCCCCccCCccEEEecC----CCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHHHHHcCCCCCCCE
Q 039047 320 GEKKAGVNFRTGVDHFCIHT----GGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAYMEAKKRLKKGDR 395 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~----~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~~~~~g~l~~Gd~ 395 (465)
+++|+.| +|||+++... ..+..--.+.++||+...-. .. ..+-+++++-.+.|+.+..-=+..++.+
T Consensus 189 ~kaGi~p---~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~---af---dLsgmGCSggl~aLdlA~~lL~a~~~~~ 259 (511)
T PLN02192 189 AKTSVKP---KDIGILIVNCSLFNPTPSLSAMVINHYKLRGNIL---SY---NLGGMGCSAGLISIDLAKHLLQVHPNSY 259 (511)
T ss_pred HHcCCCH---HHCCEEEEECCCCCCCchHHHHHHHHhCCCCCce---EE---EcccchhhhHHHHHHHHHHHHHcCCCCe
Confidence 4578884 8999998763 33456677899999874221 11 3455677777777754322112245677
Q ss_pred EEEEe
Q 039047 396 VLMIS 400 (465)
Q Consensus 396 vl~~s 400 (465)
+++++
T Consensus 260 aLVVs 264 (511)
T PLN02192 260 ALVIS 264 (511)
T ss_pred EEEEE
Confidence 77666
No 297
>TIGR03844 cysteate_syn cysteate synthase. Members of this family are cysteate synthase, an enzyme of alternate pathway to sulfopyruvate, a precursor of coenzyme M.
Probab=23.02 E-value=91 Score=32.69 Aligned_cols=64 Identities=19% Similarity=0.168 Sum_probs=47.0
Q ss_pred HHHHHHHhhC----CCCcccchhHHHHHhh-hcc---ccccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhh
Q 039047 343 AVIDGIGFSL----DLTEYDLEPARMTLHR-FGN---TSAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFK 406 (465)
Q Consensus 343 ~ii~~i~~~L----gl~~e~~~~s~~~l~~-~GN---tssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~ 406 (465)
.+++.+.+.- .++++++..+...|.+ -|- .+||..+-.|..+.++|.++++++|+++--|.|++
T Consensus 310 ~~l~air~~~g~~v~Vsd~eI~~A~~~l~~~~gi~vEpa~A~alAal~k~~~~g~i~~~~~Vv~vlTG~glK 381 (398)
T TIGR03844 310 GVFDALIATGGQMYGVSNKEAVSAGKLFEESEGIDILPAAAVAVAALVKAVESGFIGPDDDILLNITGGGYK 381 (398)
T ss_pred HHHHHHHHhCCEEEEECHHHHHHHHHHHHhhCCccccccHHHHHHHHHHHHHhCCCCCCCeEEEEECCcchh
Confidence 3567666554 4788888776666654 454 46666677777777788999999999999999975
No 298
>PRK13411 molecular chaperone DnaK; Provisional
Probab=21.92 E-value=2.5e+02 Score=31.53 Aligned_cols=45 Identities=16% Similarity=0.344 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMR 155 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~ 155 (465)
..+.++++|+++++++++||.|++... ...+|.+...|.+.+|-.
T Consensus 310 ~~~~i~~~L~~a~~~~~~id~ViLvGG-ssriP~v~~~l~~~f~~~ 354 (653)
T PRK13411 310 TIEPMQQALKDAGLKPEDIDRVILVGG-STRIPAVQEAIQKFFGGK 354 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECC-CCCcchHHHHHHHHcCCc
Confidence 456778999999999999998886531 235899999999998743
No 299
>PLN02377 3-ketoacyl-CoA synthase
Probab=21.74 E-value=1.9e+02 Score=31.32 Aligned_cols=55 Identities=5% Similarity=0.020 Sum_probs=34.4
Q ss_pred CCcCCCCCccCCccEEEecC----CCHHHHHHHHhhCCCCcccchhHHHHHhhhccccccHHHHHHHH
Q 039047 320 GEKKAGVNFRTGVDHFCIHT----GGKAVIDGIGFSLDLTEYDLEPARMTLHRFGNTSAASLWYVLAY 383 (465)
Q Consensus 320 ~~~g~~~~~~~did~~~~H~----~~~~ii~~i~~~Lgl~~e~~~~s~~~l~~~GNtssasi~~~L~~ 383 (465)
+++|+.| +|||+++... ..+..--.+.++||+.+.-. .. ..+-++++.-.+.|+.
T Consensus 185 ~kaGi~p---~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~---af---dL~gmGCsggl~aL~l 243 (502)
T PLN02377 185 ANTNVNP---KDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIR---SF---NLGGMGCSAGVIAVDL 243 (502)
T ss_pred HHcCCCH---HHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCe---EE---ecccchhhHHHHHHHH
Confidence 4577874 8999999842 23466778899999975322 11 2333555555666643
No 300
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=21.15 E-value=1.5e+02 Score=24.45 Aligned_cols=59 Identities=5% Similarity=0.053 Sum_probs=30.6
Q ss_pred cCEEEEeecCCCCCChHHHHHHHHcCCCCCceeeeecCCcchHHHHHHHHHHHHHhc-CCCCEEEEEEecC
Q 039047 128 IDILVVNISMIAIMPSLSSRIINRYKMRKDIKVFNLTGMGCSASLISVDIVRSVFKT-YKNMNAMVVTSES 197 (465)
Q Consensus 128 Id~li~~~s~~~~~Ps~a~~i~~~lgl~~~~~~~~l~~~gCs~~~~al~~A~~ll~~-g~~~~aLVV~~E~ 197 (465)
+..++++.++....-..+..+ +++|++ +. -.+ -++++ ..+..+|+. ...++++|++++.
T Consensus 31 ~~~~~lTNns~~s~~~~~~~L-~~~Gi~--~~---~~~-i~ts~----~~~~~~l~~~~~~~~v~vlG~~~ 90 (101)
T PF13344_consen 31 KPVVFLTNNSSRSREEYAKKL-KKLGIP--VD---EDE-IITSG----MAAAEYLKEHKGGKKVYVLGSDG 90 (101)
T ss_dssp SEEEEEES-SSS-HHHHHHHH-HHTTTT-------GGG-EEEHH----HHHHHHHHHHTTSSEEEEES-HH
T ss_pred CCEEEEeCCCCCCHHHHHHHH-HhcCcC--CC---cCE-EEChH----HHHHHHHHhcCCCCEEEEEcCHH
Confidence 455555432222223456666 668886 22 232 33333 445555655 4589999998874
No 301
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=21.12 E-value=1.8e+02 Score=27.38 Aligned_cols=34 Identities=32% Similarity=0.408 Sum_probs=27.5
Q ss_pred ccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhh
Q 039047 374 AASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKC 407 (465)
Q Consensus 374 sasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~ 407 (465)
+.+.|...+.+++.-.+++|++|+=++-|+|+..
T Consensus 58 ~~~~p~~~~~~~~~l~~~~g~~VLdIG~GsG~~t 91 (212)
T PRK13942 58 TISAIHMVAIMCELLDLKEGMKVLEIGTGSGYHA 91 (212)
T ss_pred EeCcHHHHHHHHHHcCCCCcCEEEEECCcccHHH
Confidence 4456666777777777899999999999999865
No 302
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=20.61 E-value=1e+02 Score=26.69 Aligned_cols=11 Identities=18% Similarity=0.313 Sum_probs=5.4
Q ss_pred EEeeeeecCCC
Q 039047 33 ILDYQCYKPTD 43 (465)
Q Consensus 33 I~~~~~y~P~~ 43 (465)
|-+.+.+.|+.
T Consensus 34 ~~gt~w~~pp~ 44 (130)
T PF12273_consen 34 IYGTRWMAPPS 44 (130)
T ss_pred cCCceecCCCC
Confidence 44455555543
No 303
>cd03765 proteasome_beta_bacterial Bacterial proteasome, beta subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Probab=20.43 E-value=1.4e+02 Score=28.92 Aligned_cols=33 Identities=12% Similarity=0.154 Sum_probs=30.2
Q ss_pred hhhhHHHHHHHHHHHHHHHcCCCcCCcCEEEEe
Q 039047 102 GIDEMEEFFEDSIAKILDRSGISPKEIDILVVN 134 (465)
Q Consensus 102 ~~~e~~~la~~Aa~~aL~~agi~~~dId~li~~ 134 (465)
..+|+.+++..|++.++++-..+++.|++.++.
T Consensus 166 s~eeai~la~~al~~a~~rd~~sg~~iev~vI~ 198 (236)
T cd03765 166 SLEDAAKCALVSMDSTMRSNLSVGPPLDLLVYE 198 (236)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEEE
Confidence 457899999999999999999999999999885
No 304
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=20.08 E-value=3.1e+02 Score=30.77 Aligned_cols=45 Identities=16% Similarity=0.290 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHcCCCcCCcCEEEEeecCCCCCChHHHHHHHHcCCC
Q 039047 110 FEDSIAKILDRSGISPKEIDILVVNISMIAIMPSLSSRIINRYKMR 155 (465)
Q Consensus 110 a~~Aa~~aL~~agi~~~dId~li~~~s~~~~~Ps~a~~i~~~lgl~ 155 (465)
....++++|+++++++++||.|++... ...+|.+..+|.+.+|-.
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~i~~~f~~~ 359 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGG-STRIPKVQSLIKDFFNGK 359 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECC-CCCChhHHHHHHHHhCCC
Confidence 345688999999999999999887531 236899999999998743
No 305
>PRK07591 threonine synthase; Validated
Probab=20.00 E-value=1e+02 Score=32.58 Aligned_cols=70 Identities=17% Similarity=0.137 Sum_probs=48.5
Q ss_pred HHHHHHHHh----hCCCCcccchhHHHHHhh-hccc---cccHHHHHHHHHHHcCCCCCCCEEEEEeeCchhhhheee
Q 039047 342 KAVIDGIGF----SLDLTEYDLEPARMTLHR-FGNT---SAASLWYVLAYMEAKKRLKKGDRVLMISFGAGFKCNSCV 411 (465)
Q Consensus 342 ~~ii~~i~~----~Lgl~~e~~~~s~~~l~~-~GNt---ssasi~~~L~~~~~~g~l~~Gd~vl~~sfGaG~~~~~~v 411 (465)
...++.+.+ ...++++++..+...|.+ .|=. +|+..+..+..+.++|.++++++|+++--|.|.+--..+
T Consensus 320 ~~~~~~i~~~~g~~v~Vsd~ei~~a~~~la~~eGi~~epssaaalAal~~l~~~g~i~~~~~VV~i~tG~G~kd~~~~ 397 (421)
T PRK07591 320 PYALDIARRTGGAIEDVTDEEIIEGIKLLARTEGIFTETAGGVTVAVLKKLVEAGKIDPDEETVVYITGNGLKTLEAV 397 (421)
T ss_pred HHHHHHHHHhCCEEEEECHHHHHHHHHHHHhcCCeeecchHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCccCCHHHH
Confidence 345555554 456777777655555544 4544 666677777777788899999999999999998754433
Done!