BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 039053
         (357 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8CJ69|BMPER_MOUSE BMP-binding endothelial regulator protein OS=Mus musculus GN=Bmper
           PE=1 SV=1
          Length = 685

 Score = 36.6 bits (83), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 29/148 (19%)

Query: 71  QARGACNMKTLVCPSQCPERKPRKNRKRKGCFIDCSSKCEVTCKWRKPNCNGYGSLCYDP 130
           + +  C  K  V  S CP+ K      RKGC   C+ K  V        C  +G    DP
Sbjct: 326 KGKTECRKKQCVPVSSCPQGK---ILNRKGCCPICTEKPGV--------CTVFG----DP 370

Query: 131 RFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPQGR-TRDFTWVQALAVMFDTH 189
            +   DG  F F G     + +  D +   +   +  +   R TR F+W +++ +M    
Sbjct: 371 HYNTFDGRTFNFQGT--CQYVLTKDCSSPASPFQVLVKNDARRTRSFSWTKSVELMLGES 428

Query: 190 TLVIAANRVSHWNDDVDALTVRWDGQTV 217
           T+ +  +           LTVRW+G  +
Sbjct: 429 TVSLQQH-----------LTVRWNGSRI 445


>sp|Q8N8U9|BMPER_HUMAN BMP-binding endothelial regulator protein OS=Homo sapiens GN=BMPER
           PE=1 SV=3
          Length = 685

 Score = 35.8 bits (81), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 60/148 (40%), Gaps = 29/148 (19%)

Query: 71  QARGACNMKTLVCPSQCPERKPRKNRKRKGCFIDCSSKCEVTCKWRKPNCNGYGSLCYDP 130
           + R  C  K  +  S CP+ K      RKGC   C+ K  V        C  +G    DP
Sbjct: 326 KGRTECRNKQCIPISSCPQGK---ILNRKGCCPICTEKPGV--------CTVFG----DP 370

Query: 131 RFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGTRPQGR-TRDFTWVQALAVMFDTH 189
            +   DG  F F G     + +  D +   +   +  +   R TR F+W +++       
Sbjct: 371 HYNTFDGRTFNFQGT--CQYVLTKDCSSPASPFQVLVKNDARRTRSFSWTKSVE------ 422

Query: 190 TLVIAANRVSHWNDDVDALTVRWDGQTV 217
            LV+  +RVS        LTVRW+G  +
Sbjct: 423 -LVLGESRVSLQQH----LTVRWNGSRI 445


>sp|Q5L431|SYE_GEOKA Glutamate--tRNA ligase OS=Geobacillus kaustophilus (strain HTA426)
           GN=gltX PE=3 SV=1
          Length = 490

 Score = 32.3 bits (72), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 7/59 (11%)

Query: 112 TCKWRKPNCNGY-------GSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAH 163
           T + + P    Y       G + ++ + VGGD V+   +G    NFA+V DD+L   +H
Sbjct: 155 TIRLKVPEGKTYEFYDLVRGKVVFESKDVGGDWVIVKANGIPTYNFAVVIDDHLMEISH 213


>sp|P34098|MANA_DICDI Lysosomal alpha-mannosidase OS=Dictyostelium discoideum GN=manA
           PE=1 SV=2
          Length = 1010

 Score = 31.6 bits (70), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 15/99 (15%)

Query: 241 DDTNSVRVTVSGLLEMDVKIRPIGAEENRTHNYQLPAGDAFAHLETQFRFSNLSKLVEGV 300
           DD N     V    E   ++    A   RT+N  +P G  FA+L  Q  + N+ KL+  +
Sbjct: 253 DDPNLFDNNVDSRAEQFTQVALEYATHYRTNNVLIPFGCDFAYLNAQMYYKNIDKLIAHI 312

Query: 301 LGKTYRPDYVSHVKRGVPMPMMGGEDKYQTPSLYSPLCN 339
                 PD     K G+ +        Y TPS+Y    N
Sbjct: 313 ---NSNPD-----KYGLNL-------LYSTPSIYIDAVN 336


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.136    0.425 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,149,399
Number of Sequences: 539616
Number of extensions: 6312383
Number of successful extensions: 12049
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 12047
Number of HSP's gapped (non-prelim): 7
length of query: 357
length of database: 191,569,459
effective HSP length: 119
effective length of query: 238
effective length of database: 127,355,155
effective search space: 30310526890
effective search space used: 30310526890
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)