BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>039056
MVAVSKQSLLYFEDLTLPSFQVIVVTANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRV
TVKADFGLNKNVKDDPTRSRVKISGCYQFFISVSGLFASAAFLRFKQKSA

High Scoring Gene Products

Symbol, full name Information P value
AT2G35730 protein from Arabidopsis thaliana 2.1e-13
CCH
copper chaperone
protein from Arabidopsis thaliana 5.0e-05
ATX1
homolog of anti-oxidant 1
protein from Arabidopsis thaliana 6.3e-05
AT3G21490 protein from Arabidopsis thaliana 8.1e-05
AT1G68585 protein from Arabidopsis thaliana 0.00021
AT2G28660 protein from Arabidopsis thaliana 0.00026
NAKR1
SODIUM POTASSIUM ROOT DEFECTIVE 1
protein from Arabidopsis thaliana 0.00028

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039056
        (110 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2058689 - symbol:AT2G35730 species:3702 "Arabi...   175  2.1e-13   1
TAIR|locus:2078461 - symbol:CCH "copper chaperone" specie...    96  5.0e-05   1
TAIR|locus:2205288 - symbol:ATX1 "homolog of anti-oxidant...    95  6.3e-05   1
TAIR|locus:2089870 - symbol:AT3G21490 "AT3G21490" species...    94  8.1e-05   1
TAIR|locus:505006208 - symbol:AT1G68585 "AT1G68585" speci...    90  0.00021   1
TAIR|locus:2065526 - symbol:AT2G28660 "AT2G28660" species...    95  0.00026   1
TAIR|locus:2181718 - symbol:NAKR1 "SODIUM POTASSIUM ROOT ...    96  0.00028   1


>TAIR|locus:2058689 [details] [associations]
            symbol:AT2G35730 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA;ISS] [GO:0009407 "toxin catabolic process"
            evidence=RCA] [GO:0010583 "response to cyclopentenone"
            evidence=RCA] InterPro:IPR006121 InterPro:IPR017969 Pfam:PF00403
            PROSITE:PS01047 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0046872 EMBL:AC006068 GO:GO:0030001 EMBL:AY088321
            EMBL:BT028885 IPI:IPI00530501 PIR:C84772 RefSeq:NP_565819.1
            UniGene:At.37635 ProteinModelPortal:Q9ZQP5 SMR:Q9ZQP5
            EnsemblPlants:AT2G35730.1 GeneID:818143 KEGG:ath:AT2G35730
            TAIR:At2g35730 eggNOG:NOG296091 HOGENOM:HOG000154038
            InParanoid:Q9ZQP5 OMA:INADVGC PhylomeDB:Q9ZQP5
            ProtClustDB:CLSN2688714 ArrayExpress:Q9ZQP5 Genevestigator:Q9ZQP5
            Uniprot:Q9ZQP5
        Length = 115

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 31/61 (50%), Positives = 47/61 (77%)

Query:     6 KQSLLYFEDLTLPSFQVIVVTANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKAD 65
             +++L+  E L+LPSFQVI + A++GC  C+ RVS+I+SK+TG+EEY+VD+  K V  + D
Sbjct:     8 RRTLMLCEKLSLPSFQVIEINADVGCVACQDRVSKIVSKMTGIEEYVVDLKKKLVMARGD 67

Query:    66 F 66
             F
Sbjct:    68 F 68


>TAIR|locus:2078461 [details] [associations]
            symbol:CCH "copper chaperone" species:3702 "Arabidopsis
            thaliana" [GO:0030001 "metal ion transport" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0046686 "response
            to cadmium ion" evidence=IEP] [GO:0009651 "response to salt stress"
            evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
            [GO:0048046 "apoplast" evidence=IDA] [GO:0006598 "polyamine
            catabolic process" evidence=RCA] [GO:0006612 "protein targeting to
            membrane" evidence=RCA] [GO:0006816 "calcium ion transport"
            evidence=RCA] [GO:0007030 "Golgi organization" evidence=RCA]
            [GO:0009611 "response to wounding" evidence=RCA] [GO:0009698
            "phenylpropanoid metabolic process" evidence=RCA] [GO:0009805
            "coumarin biosynthetic process" evidence=RCA] [GO:0009963 "positive
            regulation of flavonoid biosynthetic process" evidence=RCA]
            [GO:0010363 "regulation of plant-type hypersensitive response"
            evidence=RCA] [GO:0042398 "cellular modified amino acid
            biosynthetic process" evidence=RCA] [GO:0000302 "response to
            reactive oxygen species" evidence=IGI] [GO:0006827 "high-affinity
            iron ion transport" evidence=IGI] [GO:0006878 "cellular copper ion
            homeostasis" evidence=IMP;TAS] [GO:0007568 "aging" evidence=IEP]
            [GO:0016531 "copper chaperone activity" evidence=ISS]
            InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846 GO:GO:0009507
            GO:GO:0046686 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0048046
            GO:GO:0009651 GO:GO:0006878 GO:GO:0030001 SUPFAM:SSF55008
            eggNOG:NOG238748 HOGENOM:HOG000038877 KO:K07213 GO:GO:0016531
            HSSP:O00244 EMBL:AL163763 EMBL:U88711 EMBL:AF361860 EMBL:AY066056
            EMBL:AY085657 IPI:IPI00517088 PIR:T47741 RefSeq:NP_191183.1
            UniGene:At.24871 ProteinModelPortal:O82089 SMR:O82089 IntAct:O82089
            STRING:O82089 PaxDb:O82089 PRIDE:O82089 ProMEX:O82089
            EnsemblPlants:AT3G56240.1 GeneID:824790 KEGG:ath:AT3G56240
            TAIR:At3g56240 InParanoid:O82089 OMA:DIDIKEQ PhylomeDB:O82089
            ProtClustDB:CLSN2913444 Genevestigator:O82089 Uniprot:O82089
        Length = 121

 Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 15/45 (33%), Positives = 29/45 (64%)

Query:    21 QVIVVTANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKAD 65
             Q +V+   M C  C G V++++ K+ G+E + +D+  ++VTVK +
Sbjct:     3 QTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGN 47


>TAIR|locus:2205288 [details] [associations]
            symbol:ATX1 "homolog of anti-oxidant 1" species:3702
            "Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0030001 "metal ion
            transport" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0000785 "chromatin" evidence=IDA]
            InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0000785 GO:GO:0030001
            SUPFAM:SSF55008 HOGENOM:HOG000038877 HSSP:O00244 EMBL:AY039898
            EMBL:AY077678 IPI:IPI00524818 RefSeq:NP_564870.1 UniGene:At.57055
            ProteinModelPortal:Q94BT9 SMR:Q94BT9 IntAct:Q94BT9 STRING:Q94BT9
            PRIDE:Q94BT9 EnsemblPlants:AT1G66240.1 GeneID:842940
            KEGG:ath:AT1G66240 TAIR:At1g66240 InParanoid:Q94BT9 OMA:VGMSCEG
            PhylomeDB:Q94BT9 Genevestigator:Q94BT9 Uniprot:Q94BT9
        Length = 106

 Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 25/80 (31%), Positives = 38/80 (47%)

Query:    21 QVIVVTANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSR 80
             Q +V+   M C  C G V +++ K+ G+E + VD+  ++VTVK       NV+ D     
Sbjct:    33 QTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKG------NVQPDAVLQT 86

Query:    81 VKISGCYQFFISVSGLFASA 100
             V  +G    F    G  A A
Sbjct:    87 VTKTGKKTAFWEAEGETAKA 106


>TAIR|locus:2089870 [details] [associations]
            symbol:AT3G21490 "AT3G21490" species:3702 "Arabidopsis
            thaliana" [GO:0005507 "copper ion binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006825 "copper ion
            transport" evidence=ISS] [GO:0030001 "metal ion transport"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0030001
            SUPFAM:SSF55008 HOGENOM:HOG000234967 EMBL:BT029335 IPI:IPI00521665
            RefSeq:NP_188786.1 UniGene:At.27992 UniGene:At.66562
            ProteinModelPortal:A0JPW5 SMR:A0JPW5 IntAct:A0JPW5
            EnsemblPlants:AT3G21490.1 GeneID:821703 KEGG:ath:AT3G21490
            TAIR:At3g21490 eggNOG:NOG246289 InParanoid:A0JPW5 OMA:VEIVASK
            ProtClustDB:CLSN2685242 Genevestigator:A0JPW5 Uniprot:A0JPW5
        Length = 136

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 20/58 (34%), Positives = 33/58 (56%)

Query:    28 NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKD--DPTRSRVKI 83
             +M C  C  +++++ISK  G+E ++ D+ N +V V+     NK +K     T  RVKI
Sbjct:    21 SMHCNDCERKIARVISKFKGVETFVTDMINHKVVVRGKIDPNKLLKKLKKKTGKRVKI 78


>TAIR|locus:505006208 [details] [associations]
            symbol:AT1G68585 "AT1G68585" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR
            UniGene:At.35504 UniGene:At.71121 EMBL:AY084276 EMBL:BT028878
            EMBL:AK229745 IPI:IPI00524136 RefSeq:NP_564933.1
            ProteinModelPortal:Q8LGG7 SMR:Q8LGG7 EnsemblPlants:AT1G68585.1
            GeneID:843188 KEGG:ath:AT1G68585 TAIR:At1g68585 eggNOG:NOG273381
            HOGENOM:HOG000272697 InParanoid:Q8LGG7 PhylomeDB:Q8LGG7
            ProtClustDB:CLSN2689086 Genevestigator:Q8LGG7 Uniprot:Q8LGG7
        Length = 116

 Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
 Identities = 19/68 (27%), Positives = 40/68 (58%)

Query:     5 SKQSLLYFEDLTLPSFQVIVVTANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKA 64
             S+ SL     L++P  Q IV++A++ C+ C+ +V+ I++++      +V V  K+VT+  
Sbjct:    24 SETSLASVASLSMPLIQEIVLSADIRCSDCQEKVADIMARMIETYSILVSVLEKKVTLTC 83

Query:    65 DFGLNKNV 72
              +  ++ V
Sbjct:    84 TYSGDRRV 91


>TAIR|locus:2065526 [details] [associations]
            symbol:AT2G28660 "AT2G28660" species:3702 "Arabidopsis
            thaliana" [GO:0005507 "copper ion binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006825 "copper ion
            transport" evidence=ISS] [GO:0030001 "metal ion transport"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0006612 "protein targeting to membrane" evidence=RCA]
            [GO:0009963 "positive regulation of flavonoid biosynthetic process"
            evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
            response" evidence=RCA] InterPro:IPR006121 Pfam:PF00403
            PROSITE:PS50846 EMBL:CP002685 GO:GO:0046872 GO:GO:0030001
            SUPFAM:SSF55008 InterPro:IPR016578 PIRSF:PIRSF011221
            HOGENOM:HOG000238702 EMBL:AY303948 EMBL:BT029348 IPI:IPI00531133
            RefSeq:NP_180434.2 UniGene:At.14471 ProteinModelPortal:Q7XZS3
            SMR:Q7XZS3 EnsemblPlants:AT2G28660.1 GeneID:817415
            KEGG:ath:AT2G28660 TAIR:At2g28660 InParanoid:Q7XZS3 OMA:SSEMPLI
            PhylomeDB:Q7XZS3 ProtClustDB:CLSN2918118 Genevestigator:Q7XZS3
            Uniprot:Q7XZS3
        Length = 265

 Score = 95 (38.5 bits), Expect = 0.00026, P = 0.00026
 Identities = 17/42 (40%), Positives = 28/42 (66%)

Query:    21 QVIVVTANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTV 62
             QV+V+  ++ C  C G+V + ISK+ G+  Y +D+  K+VTV
Sbjct:   183 QVVVLRVSIHCKGCEGKVRKHISKMEGVTSYTIDLATKKVTV 224


>TAIR|locus:2181718 [details] [associations]
            symbol:NAKR1 "SODIUM POTASSIUM ROOT DEFECTIVE 1"
            species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0030001 "metal ion transport" evidence=IEA;ISS]
            [GO:0046872 "metal ion binding" evidence=IEA;ISS;IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0009908 "flower development" evidence=IMP] [GO:0010015 "root
            morphogenesis" evidence=IMP] [GO:0010233 "phloem transport"
            evidence=IMP] [GO:0055078 "sodium ion homeostasis" evidence=IMP]
            InterPro:IPR006121 Pfam:PF00403 PROSITE:PS50846 GO:GO:0005634
            GO:GO:0005737 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
            GO:GO:0009908 GO:GO:0055078 GO:GO:0030001 SUPFAM:SSF55008
            GO:GO:0010233 GO:GO:0010015 HOGENOM:HOG000238702 EMBL:AY085833
            EMBL:BT008344 EMBL:AK117227 EMBL:AK221722 IPI:IPI00544959
            RefSeq:NP_568105.1 RefSeq:NP_974723.1 UniGene:At.23074
            UniGene:At.33398 ProteinModelPortal:Q8LDS4 SMR:Q8LDS4 PRIDE:Q8LDS4
            EnsemblPlants:AT5G02600.1 EnsemblPlants:AT5G02600.2 GeneID:831874
            KEGG:ath:AT5G02600 TAIR:At5g02600 eggNOG:NOG298514
            InParanoid:Q8LDS4 OMA:ASTTTLC PhylomeDB:Q8LDS4
            ProtClustDB:CLSN2689410 Genevestigator:Q8LDS4 Uniprot:Q8LDS4
        Length = 319

 Score = 96 (38.9 bits), Expect = 0.00028, P = 0.00028
 Identities = 19/47 (40%), Positives = 29/47 (61%)

Query:    19 SFQVIVVTANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKAD 65
             S QV+V+  ++ C  C G+V + +SKL G+  Y +D   K+VTV  D
Sbjct:   248 SDQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGD 294


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.136   0.386    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      110       110   0.00091  102 3  11 22  0.38    30
                                                     29  0.42    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  510 (54 KB)
  Total size of DFA:  97 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.26u 0.16s 10.42t   Elapsed:  00:00:00
  Total cpu time:  10.26u 0.16s 10.42t   Elapsed:  00:00:00
  Start:  Fri May 10 07:11:58 2013   End:  Fri May 10 07:11:58 2013

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