BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039056
(110 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9TT99|ATOX1_CANFA Copper transport protein ATOX1 OS=Canis familiaris GN=ATOX1 PE=3
SV=1
Length = 68
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 26 TANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLN 69
+ +M C C VS++++KL G+ E+ +D+PNK+V + ++ ++
Sbjct: 7 SVDMTCEGCSNAVSRVLNKLGGV-EFDIDLPNKKVCINSEHSVD 49
>sp|O00244|ATOX1_HUMAN Copper transport protein ATOX1 OS=Homo sapiens GN=ATOX1 PE=1 SV=1
Length = 68
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 26 TANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLN 69
+ +M C C VS++++KL G++ Y +D+PNK+V ++++ ++
Sbjct: 7 SVDMTCGGCAEAVSRVLNKLGGVK-YDIDLPNKKVCIESEHSMD 49
>sp|Q9WUC4|ATOX1_RAT Copper transport protein ATOX1 OS=Rattus norvegicus GN=Atox1 PE=1
SV=1
Length = 68
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 26 TANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADF 66
+ +M C C VS++++KL G+ E+ +D+PNK+V ++++
Sbjct: 7 SVDMTCGGCAEAVSRVLNKLGGV-EFNIDLPNKKVCIESEH 46
>sp|O08997|ATOX1_MOUSE Copper transport protein ATOX1 OS=Mus musculus GN=Atox1 PE=2 SV=1
Length = 68
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 26 TANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADF 66
+ +M C C VS++++KL G+ E+ +D+PNK+V + ++
Sbjct: 7 SVDMTCEGCAEAVSRVLNKLGGV-EFNIDLPNKKVCIDSEH 46
>sp|Q9XT28|ATOX1_SHEEP Copper transport protein ATOX1 OS=Ovis aries GN=ATOX1 PE=3 SV=1
Length = 68
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 26 TANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLN 69
+ +M C C V+++++KL G++ + +D+PNK+V + ++ ++
Sbjct: 7 SVDMTCEGCSNAVTRVLNKLGGVQ-FDIDLPNKKVCINSEHSVD 49
>sp|Q3T0E0|ATOX1_BOVIN Copper transport protein ATOX1 OS=Bos taurus GN=ATOX1 PE=3 SV=1
Length = 68
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 26 TANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLN 69
+ +M C C V+++++KL G++ + +D+PNK+V + ++ ++
Sbjct: 7 SVDMTCEGCSNAVTRVLNKLGGVQ-FDIDLPNKKVCINSEHSVD 49
>sp|Q51772|MERA_PSEFL Mercuric reductase OS=Pseudomonas fluorescens GN=merA PE=3 SV=1
Length = 548
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 25 VTAN-MGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKN 71
+T N M CT C V + K+ G+ +V P R V AD ++ N
Sbjct: 4 ITVNGMTCTSCATHVKDALEKIPGVNAAVVSYPESRAQVMADTAVSHN 51
>sp|P0A5Y0|MODA_MYCTU Molybdate-binding protein OS=Mycobacterium tuberculosis GN=modA
PE=3 SV=1
Length = 261
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 12 FEDLTLPSFQVIVVTANMGCTRCRGRVSQIISKLTGL-------EEYIVDVPNKRVTVKA 64
F DLT P V+V ++ C G ++ I TG+ E + DV NK +T +A
Sbjct: 136 FADLTRPGLNVVVCQPSVPC----GSATRRIEDATGIHLNPVSEELSVTDVLNKVITGQA 191
Query: 65 DFGL 68
D GL
Sbjct: 192 DAGL 195
>sp|P0A5Y1|MODA_MYCBO Molybdate-binding protein OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=modA PE=3 SV=1
Length = 261
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 12 FEDLTLPSFQVIVVTANMGCTRCRGRVSQIISKLTGL-------EEYIVDVPNKRVTVKA 64
F DLT P V+V ++ C G ++ I TG+ E + DV NK +T +A
Sbjct: 136 FADLTRPGLNVVVCQPSVPC----GSATRRIEDATGIHLNPVSEELSVTDVLNKVITGQA 191
Query: 65 DFGL 68
D GL
Sbjct: 192 DAGL 195
>sp|O64474|HMA4_ARATH Putative cadmium/zinc-transporting ATPase HMA4 OS=Arabidopsis
thaliana GN=HMA4 PE=1 SV=2
Length = 1172
Score = 32.7 bits (73), Expect = 0.75, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 31 CTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKAD------FGLNKNVKDDPTRSRVKIS 84
CT + I+ L G++EY V VP++ V V D F + K + + + V+++
Sbjct: 28 CTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVN 87
Query: 85 GCYQF-------FISVSGLFASAAFLRF 105
G F F VSGL +FL+F
Sbjct: 88 GETSFKNKWPSPFAVVSGLLLLLSFLKF 115
>sp|Q4L9F1|CYSI_STAHJ Sulfite reductase [NADPH] hemoprotein beta-component
OS=Staphylococcus haemolyticus (strain JCSC1435) GN=cysI
PE=3 SV=1
Length = 573
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 13 EDLTLPSFQVIVVTANMGCTRCRGRVSQIISKLTGL--EEYIVDVPNKRVTVKADFGLNK 70
ED TL F V V MG T + +L G +E +VDV K +T++ D+G +
Sbjct: 244 EDETLVGFNV-TVGGGMGMTHGNTDTYPQVGRLAGFVPKEQVVDVCEKILTIQRDYGNRE 302
Query: 71 NVKD 74
N K+
Sbjct: 303 NRKN 306
>sp|Q9SH30|HMA5_ARATH Putative copper-transporting ATPase HMA5 OS=Arabidopsis thaliana
GN=HMA5 PE=2 SV=2
Length = 995
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 20 FQVIVVTANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTV 62
FQV+ M C+ C G V + I +L G+ + ++D N R +
Sbjct: 55 FQVL----GMTCSACAGSVEKAIKRLPGIHDAVIDALNNRAQI 93
>sp|P37279|ATCS_SYNE7 Cation-transporting ATPase PacS OS=Synechococcus elongatus
(strain PCC 7942) GN=pacS PE=3 SV=2
Length = 747
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 21 QVIVVTANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNK 70
Q + MGC C GR+ +I L G++E V+ ++ V D L +
Sbjct: 4 QQTLTLRGMGCAACAGRIEALIQALPGVQECSVNFGAEQAQVCYDPALTQ 53
>sp|Q54PZ2|ATOX1_DICDI Copper transport protein ATOX1 homolog OS=Dictyostelium
discoideum GN=atox1 PE=3 SV=2
Length = 67
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 28 NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKA 64
+M C C V+ I+SK+ G+ +D+ NK+V+ ++
Sbjct: 8 DMTCGGCSKAVNAILSKIDGVSNIQIDLENKKVSCES 44
>sp|O71024|VP2_AHSV6 Outer capsid protein VP2 OS=African horse sickness virus 6 GN=S2
PE=2 SV=1
Length = 1051
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 48 LEEYIVDVPNKRVTVKADFGLNKNVKDDPT 77
LE I PN + ++A+FG+N N+KD T
Sbjct: 501 LETVIQMFPNFKQEIQANFGINLNIKDKKT 530
>sp|E9Q557|DESP_MOUSE Desmoplakin OS=Mus musculus GN=Dsp PE=3 SV=1
Length = 2883
Score = 29.6 bits (65), Expect = 6.5, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 26 TANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSR 80
+A +C G++ ++ K+T L I D +R TV+ F KN D ++R
Sbjct: 1104 SAKQNLDKCYGQIKELNEKITRLTYEIEDEKRRRKTVEDRFDQQKNDYDQLQKAR 1158
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,231,862
Number of Sequences: 539616
Number of extensions: 1111369
Number of successful extensions: 3185
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3171
Number of HSP's gapped (non-prelim): 22
length of query: 110
length of database: 191,569,459
effective HSP length: 78
effective length of query: 32
effective length of database: 149,479,411
effective search space: 4783341152
effective search space used: 4783341152
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)