Query 039056
Match_columns 110
No_of_seqs 110 out of 1123
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 09:31:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039056.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039056hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.6 1.8E-15 6.3E-20 90.6 9.3 65 22-93 3-67 (68)
2 3dxs_X Copper-transporting ATP 99.6 5.8E-15 2E-19 88.9 9.6 69 21-92 2-71 (74)
3 4a4j_A Pacszia, cation-transpo 99.6 8.9E-15 3E-19 86.8 9.9 66 21-90 2-68 (69)
4 1cc8_A Protein (metallochapero 99.5 1.7E-13 5.6E-18 82.5 10.5 66 21-92 5-71 (73)
5 2crl_A Copper chaperone for su 99.5 4.4E-13 1.5E-17 86.1 11.3 70 19-94 17-86 (98)
6 3cjk_B Copper-transporting ATP 99.5 5E-13 1.7E-17 79.6 10.8 71 22-95 3-74 (75)
7 3fry_A Probable copper-exporti 99.5 1.7E-13 5.8E-18 82.8 7.4 65 20-92 4-69 (73)
8 1osd_A MERP, hypothetical prot 99.5 6.9E-13 2.3E-17 78.0 9.5 67 21-90 3-70 (72)
9 2l3m_A Copper-ION-binding prot 99.4 1.3E-12 4.3E-17 76.8 9.8 64 21-87 5-69 (71)
10 1cpz_A Protein (COPZ); copper 99.4 7.8E-13 2.7E-17 76.8 8.6 64 24-90 3-67 (68)
11 2xmw_A PACS-N, cation-transpor 99.4 1.3E-12 4.5E-17 76.4 9.6 65 21-89 3-68 (71)
12 1aw0_A Menkes copper-transport 99.4 1.1E-12 3.9E-17 77.0 9.2 66 21-89 3-69 (72)
13 1yg0_A COP associated protein; 99.4 7.7E-13 2.6E-17 76.4 7.6 62 23-88 3-65 (66)
14 2qif_A Copper chaperone COPZ; 99.4 2.6E-12 8.8E-17 73.9 9.8 63 22-87 3-66 (69)
15 1kvi_A Copper-transporting ATP 99.4 1.4E-12 4.9E-17 78.4 8.2 69 20-91 7-76 (79)
16 1opz_A Potential copper-transp 99.4 2.3E-12 7.8E-17 76.1 8.8 68 20-90 5-73 (76)
17 1fvq_A Copper-transporting ATP 99.4 2.4E-12 8.3E-17 75.6 8.9 67 22-92 3-70 (72)
18 2g9o_A Copper-transporting ATP 99.4 2E-12 6.9E-17 81.1 9.0 70 22-94 4-77 (90)
19 2xmm_A SSR2857 protein, ATX1; 99.4 1.1E-12 3.7E-17 75.3 7.1 59 23-87 3-62 (64)
20 1q8l_A Copper-transporting ATP 99.4 1.6E-12 5.6E-17 79.9 8.3 69 21-92 9-78 (84)
21 1y3j_A Copper-transporting ATP 99.4 1.3E-12 4.4E-17 78.4 7.5 68 21-91 3-71 (77)
22 1mwy_A ZNTA; open-faced beta-s 99.4 3.8E-12 1.3E-16 75.6 9.5 64 21-89 3-67 (73)
23 2kt2_A Mercuric reductase; nme 99.4 2.6E-12 8.8E-17 75.2 8.1 62 24-89 3-65 (69)
24 2roe_A Heavy metal binding pro 99.4 9.8E-13 3.3E-17 76.9 6.3 60 24-89 3-63 (66)
25 2ldi_A Zinc-transporting ATPas 99.4 3E-12 1E-16 74.3 8.1 65 21-88 3-68 (71)
26 1yjr_A Copper-transporting ATP 99.4 2.4E-12 8.3E-17 76.1 7.0 66 22-90 5-71 (75)
27 2ofg_X Zinc-transporting ATPas 99.4 3.4E-12 1.2E-16 83.2 8.0 75 21-98 8-87 (111)
28 2k2p_A Uncharacterized protein 99.3 2.8E-12 9.7E-17 80.2 7.1 61 21-87 22-83 (85)
29 1jww_A Potential copper-transp 99.3 5.8E-12 2E-16 75.5 8.1 68 21-91 3-71 (80)
30 2ew9_A Copper-transporting ATP 99.3 9.4E-12 3.2E-16 82.9 9.9 82 20-104 3-97 (149)
31 2ew9_A Copper-transporting ATP 99.3 5.5E-12 1.9E-16 84.0 8.5 67 21-90 80-147 (149)
32 1p6t_A Potential copper-transp 99.3 8.7E-12 3E-16 83.5 7.9 68 21-91 74-142 (151)
33 2kyz_A Heavy metal binding pro 99.3 9.9E-12 3.4E-16 72.9 6.8 58 23-88 3-61 (67)
34 2kkh_A Putative heavy metal tr 99.3 3.7E-11 1.3E-15 75.5 9.6 70 20-92 15-85 (95)
35 2rop_A Copper-transporting ATP 99.2 6.3E-11 2.2E-15 83.8 9.7 69 21-92 122-191 (202)
36 1p6t_A Potential copper-transp 99.2 8.9E-11 3.1E-15 78.5 8.8 81 21-104 6-91 (151)
37 2rop_A Copper-transporting ATP 99.2 1.1E-10 3.8E-15 82.5 9.5 62 20-84 19-81 (202)
38 1qup_A Superoxide dismutase 1 99.2 1.5E-10 5.2E-15 84.6 9.7 68 22-95 7-74 (222)
39 2aj0_A Probable cadmium-transp 99.1 8.9E-11 3E-15 69.3 6.0 59 22-90 4-63 (71)
40 1jk9_B CCS, copper chaperone f 99.1 5.6E-10 1.9E-14 83.0 9.7 68 22-95 8-75 (249)
41 3j09_A COPA, copper-exporting 99.0 1.7E-09 6E-14 90.1 8.7 64 22-88 3-67 (723)
42 3lvj_C Sulfurtransferase TUSA; 92.7 0.96 3.3E-05 27.3 7.8 56 22-90 10-66 (82)
43 1jdq_A TM006 protein, hypothet 91.2 1.5 5.1E-05 27.6 7.6 57 23-92 27-84 (98)
44 1je3_A EC005, hypothetical 8.6 90.6 1.5 5E-05 27.6 7.1 56 22-90 27-83 (97)
45 1nwa_A Peptide methionine sulf 87.7 1.9 6.4E-05 30.9 6.6 66 8-81 13-93 (203)
46 3hz7_A Uncharacterized protein 87.2 1.7 5.7E-05 26.6 5.4 54 24-89 3-57 (87)
47 2raq_A Conserved protein MTH88 86.9 2.4 8.1E-05 27.0 6.0 62 21-86 7-74 (97)
48 2x3d_A SSO6206; unknown functi 85.2 2.3 7.9E-05 27.0 5.3 61 20-86 4-73 (96)
49 3bpd_A Uncharacterized protein 84.6 1.3 4.6E-05 28.2 4.0 61 20-86 6-74 (100)
50 1pav_A Hypothetical protein TA 82.5 0.8 2.7E-05 27.2 2.3 52 23-87 7-59 (78)
51 3lno_A Putative uncharacterize 82.4 1.3 4.6E-05 28.0 3.5 34 23-56 46-86 (108)
52 3cq1_A Putative uncharacterize 80.9 1.9 6.4E-05 26.9 3.7 34 23-56 43-82 (103)
53 1fvg_A Peptide methionine sulf 77.2 12 0.0004 26.6 7.2 47 32-81 50-115 (199)
54 1uwd_A Hypothetical protein TM 76.7 2.1 7.3E-05 26.6 3.0 34 23-56 44-83 (103)
55 4gwb_A Peptide methionine sulf 76.3 5.3 0.00018 27.7 5.1 47 32-81 9-70 (168)
56 3bqh_A PILB, peptide methionin 73.0 11 0.00038 26.6 6.2 47 32-81 9-74 (193)
57 1ff3_A Peptide methionine sulf 72.7 17 0.00059 26.0 7.3 47 32-81 49-114 (211)
58 2j89_A Methionine sulfoxide re 68.2 7.9 0.00027 28.7 4.7 47 32-81 101-166 (261)
59 3e0m_A Peptide methionine sulf 64.7 17 0.00058 27.6 6.0 47 32-81 9-72 (313)
60 2jsx_A Protein NAPD; TAT, proo 57.2 31 0.0011 21.2 6.3 47 32-83 16-62 (95)
61 3pim_A Peptide methionine sulf 44.4 39 0.0013 23.7 4.8 53 21-81 20-99 (187)
62 2nyt_A Probable C->U-editing e 38.3 20 0.00069 25.0 2.5 74 23-107 85-159 (190)
63 4e6k_G BFD, bacterioferritin-a 33.7 16 0.00055 21.6 1.2 19 26-44 33-51 (73)
64 1okg_A Possible 3-mercaptopyru 30.9 24 0.00081 26.7 2.0 41 23-63 322-363 (373)
65 3qfa_C Thioredoxin; protein-pr 30.2 88 0.003 18.5 5.1 33 23-55 34-70 (116)
66 3v4k_A DNA DC->DU-editing enzy 29.7 26 0.0009 24.9 2.0 27 22-48 101-128 (203)
67 3vow_A Probable DNA DC->DU-edi 29.6 28 0.00095 24.5 2.1 28 21-48 86-114 (190)
68 2v50_A Multidrug resistance pr 26.1 1E+02 0.0034 26.4 5.3 50 35-84 159-210 (1052)
69 1ego_A Glutaredoxin; electron 25.1 47 0.0016 18.3 2.2 27 28-55 8-38 (85)
70 1h75_A Glutaredoxin-like prote 24.5 79 0.0027 17.2 3.2 20 28-49 8-27 (81)
71 1fb6_A Thioredoxin M; electron 24.2 1E+02 0.0035 17.2 4.7 16 23-38 21-37 (105)
72 1r7h_A NRDH-redoxin; thioredox 23.5 88 0.003 16.6 3.2 25 28-54 8-32 (75)
73 4euy_A Uncharacterized protein 22.6 1.2E+02 0.004 17.3 5.8 33 23-55 21-57 (105)
74 3d22_A TRXH4, thioredoxin H-ty 22.2 1.4E+02 0.0047 18.0 5.0 33 23-55 49-85 (139)
75 1whz_A Hypothetical protein; a 22.0 85 0.0029 17.6 2.9 16 72-87 5-20 (70)
76 2vm1_A Thioredoxin, thioredoxi 21.2 1.3E+02 0.0044 17.3 5.0 33 23-55 31-67 (118)
77 2jvf_A De novo protein M7; tet 20.8 83 0.0028 18.9 2.7 59 30-96 30-88 (96)
78 4dvc_A Thiol:disulfide interch 20.8 45 0.0016 21.3 1.7 10 28-37 30-39 (184)
79 2fwh_A Thiol:disulfide interch 20.6 1.5E+02 0.0052 17.9 4.6 33 23-55 34-73 (134)
80 1owx_A Lupus LA protein, SS-B, 20.5 1.7E+02 0.006 18.5 6.3 63 14-84 12-76 (121)
81 1t1v_A SH3BGRL3, SH3 domain-bi 20.2 1.4E+02 0.0046 17.2 3.9 28 27-55 8-40 (93)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.64 E-value=1.8e-15 Score=90.55 Aligned_cols=65 Identities=26% Similarity=0.519 Sum_probs=59.8
Q ss_pred EEEEEeeccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEEee
Q 039056 22 VIVVTANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFISV 93 (110)
Q Consensus 22 ~~~~~Vgm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~~~ 93 (110)
+..|.+||+|++|+.+|+++|++++|| ++++|+.+++++|.++ .++++|.++|++.||...+++.
T Consensus 3 ~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~------~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 3 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESE------HSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEES------SCHHHHHHHHHTTCSCEEEEEC
T ss_pred eEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEec------CCHHHHHHHHHHcCCceEecCC
Confidence 467888999999999999999999999 9999999999999985 6789999999999999888763
No 2
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.61 E-value=5.8e-15 Score=88.88 Aligned_cols=69 Identities=20% Similarity=0.323 Sum_probs=62.4
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEEe
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFIS 92 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~~ 92 (110)
+++.|.+ ||+|++|+.+|++.|++++||..+.+|+.+++++|.++. ..+++++|.+++++.||...+++
T Consensus 2 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~Gy~~~~~~ 71 (74)
T 3dxs_X 2 RKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDP---NLVKEEDIKEEIEDAGFEAEILA 71 (74)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECT---TTCCHHHHHHHHHHHTCEEEEEE
T ss_pred cEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECC---CCCCHHHHHHHHHHCCCceEEcc
Confidence 4578999 999999999999999999999999999999999999873 34688999999999999877665
No 3
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.61 E-value=8.9e-15 Score=86.82 Aligned_cols=66 Identities=20% Similarity=0.326 Sum_probs=60.1
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEE
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFF 90 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~ 90 (110)
+++.|.+ ||+|++|+.+|++.|++++||..+.+|+.+++++|.++ ...++++|.+++++.||...+
T Consensus 2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~----~~~~~~~i~~~i~~~Gy~~~~ 68 (69)
T 4a4j_A 2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYH----GETTPQILTDAVERAGYHARV 68 (69)
T ss_dssp EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC----TTCCHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC----CCCCHHHHHHHHHHcCCceEe
Confidence 4678999 99999999999999999999999999999999999984 347899999999999998654
No 4
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.53 E-value=1.7e-13 Score=82.46 Aligned_cols=66 Identities=18% Similarity=0.264 Sum_probs=59.7
Q ss_pred eEEEEEeeccChhHHHHHHHHHhcCC-CcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEEe
Q 039056 21 QVIVVTANMGCTRCRGRVSQIISKLT-GLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFIS 92 (110)
Q Consensus 21 ~~~~~~Vgm~C~~C~~~Vek~L~~i~-GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~~ 92 (110)
.++.|.++|+|++|+.+|++.|++++ ||.++++|+.+++++|.++ .+++.|.+++++.||...++.
T Consensus 5 ~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~------~~~~~i~~~i~~~Gy~~~~~~ 71 (73)
T 1cc8_A 5 KHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTT------LPYDFILEKIKKTGKEVRSGK 71 (73)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEES------SCHHHHHHHHHTTSSCEEEEE
T ss_pred eEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEe------CCHHHHHHHHHHhCCCceeee
Confidence 45678888999999999999999999 9999999999999999974 578999999999999876654
No 5
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=4.4e-13 Score=86.09 Aligned_cols=70 Identities=13% Similarity=0.308 Sum_probs=62.3
Q ss_pred ceeEEEEEeeccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEEeeC
Q 039056 19 SFQVIVVTANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFISVS 94 (110)
Q Consensus 19 ~~~~~~~~Vgm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~~~~ 94 (110)
...++.|.|+|+|++|+.+|++.|.+++||..+.+|+..++++|.++ .+++.|.++|++.||...++...
T Consensus 17 ~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~------~~~~~i~~~i~~~Gy~~~~~~~~ 86 (98)
T 2crl_A 17 TLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTT------LPSQEVQALLEGTGRQAVLKGMG 86 (98)
T ss_dssp CCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEES------SCHHHHHHHHHTTTSCEEEEESC
T ss_pred cceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEe------CCHHHHHHHHHHhCCceEEccCC
Confidence 34567888889999999999999999999999999999999999975 57799999999999997776644
No 6
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.49 E-value=5e-13 Score=79.61 Aligned_cols=71 Identities=20% Similarity=0.326 Sum_probs=62.2
Q ss_pred EEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEEeeCC
Q 039056 22 VIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFISVSG 95 (110)
Q Consensus 22 ~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~~~~g 95 (110)
++.|.+ ||+|++|+.+|++.|.+++||..+.+|+..++++|.++. ...+++.|.+.+++.||...+....|
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~Gy~~~~~~~~~ 74 (75)
T 3cjk_B 3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDP---KLQTPKTLQEAIDDMGFDAVIHNIEG 74 (75)
T ss_dssp EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECT---TTCCHHHHHHHHHHTTCCEEEEEEEC
T ss_pred EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECC---CCCCHHHHHHHHHHcCCceEeecCcC
Confidence 467889 999999999999999999999999999999999999873 24678899999999999877666544
No 7
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.47 E-value=1.7e-13 Score=82.79 Aligned_cols=65 Identities=22% Similarity=0.324 Sum_probs=58.6
Q ss_pred eeEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEEe
Q 039056 20 FQVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFIS 92 (110)
Q Consensus 20 ~~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~~ 92 (110)
+++..|.+ ||+|++|+.+|++.|++ +||..+.+|+.+++++|.++ +++.|.++|+++||...+++
T Consensus 4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-------~~~~i~~~i~~~Gy~~~~~~ 69 (73)
T 3fry_A 4 VEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-------DVDKYIKAVEAAGYQAKLRS 69 (73)
T ss_dssp CEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-------GHHHHHHHHHHTTCEEEECC
T ss_pred cEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-------CHHHHHHHHHHcCCceEecC
Confidence 35678999 99999999999999999 99999999999999999875 56899999999999876654
No 8
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.46 E-value=6.9e-13 Score=77.97 Aligned_cols=67 Identities=19% Similarity=0.269 Sum_probs=59.4
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEE
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFF 90 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~ 90 (110)
.+..|.+ ||+|++|+.+|++.|.+++||..+.+|+..++++|.++. ...+++.|.+.+++.||...+
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDD---AKTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEET---TTCCHHHHHHHHHHTTCCCEE
T ss_pred eEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECC---CCCCHHHHHHHHHhcCCCeEe
Confidence 4578999 999999999999999999999999999999999999873 246788999999999997543
No 9
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.45 E-value=1.3e-12 Score=76.78 Aligned_cols=64 Identities=19% Similarity=0.330 Sum_probs=57.8
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCc
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCY 87 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~ 87 (110)
.+..|.+ ||+|++|+.+|++.|.+++||..+.+|+..++++|.++. ...+++.|.+.+++.||.
T Consensus 5 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~G~~ 69 (71)
T 2l3m_A 5 EQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDS---SVVTLKDIVAVIEDQGYD 69 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEET---TTSCHHHHHHHHHHTTCE
T ss_pred EEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECC---CCCCHHHHHHHHHHcCCC
Confidence 4578999 999999999999999999999999999999999999873 246788999999999985
No 10
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.44 E-value=7.8e-13 Score=76.77 Aligned_cols=64 Identities=19% Similarity=0.385 Sum_probs=57.3
Q ss_pred EEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEE
Q 039056 24 VVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFF 90 (110)
Q Consensus 24 ~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~ 90 (110)
.|.+ ||+|++|+.+|++.|.+++||..+.+|+..+++++.++. ...+++.|.+.+++.||...+
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDE---ANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECT---TTCCHHHHHHHHHTTSSCEEE
T ss_pred EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECC---CCCCHHHHHHHHHHcCCCccc
Confidence 5788 999999999999999999999999999999999999873 246788999999999997554
No 11
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.44 E-value=1.3e-12 Score=76.37 Aligned_cols=65 Identities=18% Similarity=0.292 Sum_probs=56.9
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceE
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQF 89 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~ 89 (110)
++..|.+ ||+|++|+.+|++.|.+++||..+.+|+.+++++|.++. ..+++.|.+.+++.||...
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~----~~~~~~i~~~i~~~G~~~~ 68 (71)
T 2xmw_A 3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHG----ETTPQILTDAVERAGYHAR 68 (71)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC-------CHHHHHHHHHHHTCEEE
T ss_pred cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECC----CCCHHHHHHHHHHcCCCce
Confidence 4568899 999999999999999999999999999999999999872 2678899999999999754
No 12
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.44 E-value=1.1e-12 Score=77.00 Aligned_cols=66 Identities=24% Similarity=0.316 Sum_probs=58.5
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceE
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQF 89 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~ 89 (110)
++..|.+ ||+|++|+.+|++.|.+++||..+.+|+..++++|.++. ...+++.|.+.+++.||...
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~G~~~~ 69 (72)
T 1aw0_A 3 QETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDP---LLTSPETLRGAIEDMGFDAT 69 (72)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECT---TTCCHHHHHHHHHHHTCEEE
T ss_pred eEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECC---CcCCHHHHHHHHHHCCCCcE
Confidence 3468899 999999999999999999999999999999999999873 23677899999999998753
No 13
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.42 E-value=7.7e-13 Score=76.39 Aligned_cols=62 Identities=18% Similarity=0.324 Sum_probs=55.8
Q ss_pred EEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCce
Q 039056 23 IVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQ 88 (110)
Q Consensus 23 ~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~ 88 (110)
..|.+ ||+|++|+.+|++.|.+++||..+.+|+..+++++.++. ..+++.|.+.+++.||..
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~----~~~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 3 ATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDA----PATQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECT----TCCHHHHHHHHHHHTCCC
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECC----CCCHHHHHHHHHHcCCCc
Confidence 57889 999999999999999999999999999999999999873 247789999999999864
No 14
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.42 E-value=2.6e-12 Score=73.92 Aligned_cols=63 Identities=19% Similarity=0.312 Sum_probs=56.7
Q ss_pred EEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCc
Q 039056 22 VIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCY 87 (110)
Q Consensus 22 ~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~ 87 (110)
+..|.+ ||+|++|+.+|++.|.+++||..+.+|+..++++|.++. ...+++.|.+.+++.||.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~G~~ 66 (69)
T 2qif_A 3 QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDA---DKVSVKDIADAIEDQGYD 66 (69)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECT---TTCCHHHHHHHHHHTTCE
T ss_pred EEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECC---CCCCHHHHHHHHHHcCCC
Confidence 457889 999999999999999999999999999999999999873 346788999999999985
No 15
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.40 E-value=1.4e-12 Score=78.43 Aligned_cols=69 Identities=19% Similarity=0.288 Sum_probs=60.5
Q ss_pred eeEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEE
Q 039056 20 FQVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFI 91 (110)
Q Consensus 20 ~~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~ 91 (110)
..+..|.+ ||+|++|+.+|++.|.+++||..+.+|+.+++++|.++. ....++.|.+++++.||...+.
T Consensus 7 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~Gy~~~~~ 76 (79)
T 1kvi_A 7 VNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDP---KLQTPKTLQEAIDDMGFDAVIH 76 (79)
T ss_dssp CEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECT---TTCCHHHHHHHHHHHCCCEEEC
T ss_pred cEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECC---CCCCHHHHHHHHHHCCCceEec
Confidence 34578999 999999999999999999999999999999999999873 2467789999999999976543
No 16
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.40 E-value=2.3e-12 Score=76.12 Aligned_cols=68 Identities=16% Similarity=0.338 Sum_probs=59.7
Q ss_pred eeEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEE
Q 039056 20 FQVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFF 90 (110)
Q Consensus 20 ~~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~ 90 (110)
..+..|.+ ||+|++|+.+|++.|.+++||..+.+|+..+++.|.++. ...+++.|.+.+++.||....
T Consensus 5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~G~~~~~ 73 (76)
T 1opz_A 5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDP---AETGTAAIQEKIEKLGYHVVI 73 (76)
T ss_dssp CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECT---TTCCHHHHHHHHHHHTCEEEC
T ss_pred ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECC---CCCCHHHHHHHHHHCCCceec
Confidence 45678999 999999999999999999999999999999999999873 246788999999999997543
No 17
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.40 E-value=2.4e-12 Score=75.56 Aligned_cols=67 Identities=15% Similarity=0.348 Sum_probs=59.5
Q ss_pred EEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEEe
Q 039056 22 VIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFIS 92 (110)
Q Consensus 22 ~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~~ 92 (110)
++.|.+ ||+|++|+.+|++.|.+++||..+.+|+.+++++|.++ . ..+++.|.+.+++.||...++.
T Consensus 3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~-~---~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYD-N---EVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEEC-T---TSCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEEC-C---CCCHHHHHHHHHHCCCceEEcc
Confidence 367889 99999999999999999999999999999999999986 2 3677899999999999876654
No 18
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.40 E-value=2e-12 Score=81.08 Aligned_cols=70 Identities=16% Similarity=0.222 Sum_probs=60.8
Q ss_pred EEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhc---CCceEEEeeC
Q 039056 22 VIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKIS---GCYQFFISVS 94 (110)
Q Consensus 22 ~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~---G~~~~~~~~~ 94 (110)
++.|.+ ||+|++|+.+|++.|.+++||..+.+|+.+++++|.++. ..++++.|.+++++. ||...++...
T Consensus 4 ~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~---~~~~~~~i~~~i~~~g~Ggy~~~~~~~~ 77 (90)
T 2g9o_A 4 TATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNA---SSVTPESLRKAIEAVSPGLYRVSITSEV 77 (90)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECC---SSCCTHHHHHHHHTTSTTTCEEECCCCC
T ss_pred EEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECC---CCCCHHHHHHHHHhccCCCeEEEEeCCC
Confidence 467889 999999999999999999999999999999999999873 246778999999999 5877665544
No 19
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.40 E-value=1.1e-12 Score=75.32 Aligned_cols=59 Identities=20% Similarity=0.429 Sum_probs=54.2
Q ss_pred EEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCc
Q 039056 23 IVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCY 87 (110)
Q Consensus 23 ~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~ 87 (110)
..|.+ ||+|++|+.+|++.|.+++||..+.+|+..++++|.++ .+++.|.+++++.||.
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~------~~~~~i~~~i~~~G~~ 62 (64)
T 2xmm_A 3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSA------LGEEQLRTAIASAGYE 62 (64)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECS------SCHHHHHHHHHHTTCC
T ss_pred EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEec------CCHHHHHHHHHHcCCC
Confidence 56889 99999999999999999999999999999999999853 5678999999999985
No 20
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.40 E-value=1.6e-12 Score=79.85 Aligned_cols=69 Identities=19% Similarity=0.356 Sum_probs=60.9
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEEe
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFIS 92 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~~ 92 (110)
.++.|.+ ||+|++|+.+|++.|.+++||..+.+|+..++++|.++. ...+++.|.+.+++.||...+..
T Consensus 9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~Gy~~~~~~ 78 (84)
T 1q8l_A 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQP---HLISVEEMKKQIEAMGFPAFVKK 78 (84)
T ss_dssp EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECT---TTCCHHHHHHHHHHTTCCEECSC
T ss_pred eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECC---CCCCHHHHHHHHHHcCCceEecC
Confidence 4678999 999999999999999999999999999999999999873 24678899999999999865543
No 21
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.39 E-value=1.3e-12 Score=78.43 Aligned_cols=68 Identities=12% Similarity=0.214 Sum_probs=59.9
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEE
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFI 91 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~ 91 (110)
++..|.+ ||+|++|+.+|++.|.+++||..+.+|+..++++|.++. ...+++.|.+++++.||....+
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~Gy~~~~~ 71 (77)
T 1y3j_A 3 SKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNP---AVIQPPMIAEFIRELGFGATVI 71 (77)
T ss_dssp EEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECT---TTSCHHHHHHHHHHHTSCEEEE
T ss_pred EEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECC---CCCCHHHHHHHHHHcCCceEEC
Confidence 4578999 999999999999999999999999999999999999873 2367789999999999986543
No 22
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.39 E-value=3.8e-12 Score=75.62 Aligned_cols=64 Identities=19% Similarity=0.315 Sum_probs=56.7
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceE
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQF 89 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~ 89 (110)
.++.|.+ ||+|++|+.+|++.|.+++||..+.+|+.+++++|.++. . ..+.|.+.+++.||...
T Consensus 3 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~----~-~~~~i~~~i~~~Gy~~~ 67 (73)
T 1mwy_A 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADN----D-IRAQVESALQKAGYSLR 67 (73)
T ss_dssp EEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESS----C-CHHHHHHHHHHHTCEEE
T ss_pred eEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECC----C-CHHHHHHHHHHcCCccc
Confidence 4578899 999999999999999999999999999999999999873 1 36889999999998653
No 23
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.38 E-value=2.6e-12 Score=75.17 Aligned_cols=62 Identities=18% Similarity=0.298 Sum_probs=55.9
Q ss_pred EEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceE
Q 039056 24 VVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQF 89 (110)
Q Consensus 24 ~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~ 89 (110)
.|.+ ||+|++|+.+|++.|.+++||..+.+|+..+++++.++. ...++.|.+.+++.||...
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~----~~~~~~i~~~i~~~Gy~~~ 65 (69)
T 2kt2_A 3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVP----GTSPDALTAAVAGLGYKAT 65 (69)
T ss_dssp CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECT----TSCHHHHHHHHHTTTSEEE
T ss_pred EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECC----CCCHHHHHHHHHHCCCceE
Confidence 4778 999999999999999999999999999999999999873 2578899999999999754
No 24
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.38 E-value=9.8e-13 Score=76.95 Aligned_cols=60 Identities=18% Similarity=0.299 Sum_probs=53.9
Q ss_pred EEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceE
Q 039056 24 VVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQF 89 (110)
Q Consensus 24 ~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~ 89 (110)
.|.+ ||+|++|+.+|++.|.+++||.++.+|+..++++| + ...+++.|.+++++.||...
T Consensus 3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v--~----~~~~~~~i~~~i~~~Gy~~~ 63 (66)
T 2roe_A 3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALV--E----GTADPKALVQAVEEEGYKAE 63 (66)
T ss_dssp CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEE--C----SCCCHHHHHHHHHTTTCEEE
T ss_pred EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEE--C----CCCCHHHHHHHHHHcCCCcE
Confidence 5778 99999999999999999999999999999999999 2 13678999999999999754
No 25
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.37 E-value=3e-12 Score=74.32 Aligned_cols=65 Identities=25% Similarity=0.412 Sum_probs=57.5
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCce
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQ 88 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~ 88 (110)
.+..|.+ ||+|++|+.+|++.|.+++||..+.+|+..++++|.++. ...+++.+.+.+++.||..
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~G~~~ 68 (71)
T 2ldi_A 3 KTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDP---KQVSEITIQERIAALGYTL 68 (71)
T ss_dssp EEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECT---TTCCTHHHHHHHHTTTCEE
T ss_pred EEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECC---CCCCHHHHHHHHHHcCCCc
Confidence 3467889 999999999999999999999999999999999999873 2467788999999999863
No 26
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.36 E-value=2.4e-12 Score=76.12 Aligned_cols=66 Identities=15% Similarity=0.269 Sum_probs=57.8
Q ss_pred EEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEE
Q 039056 22 VIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFF 90 (110)
Q Consensus 22 ~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~ 90 (110)
++.|.+ ||+|++|+.+|++.|.+++||..+.+|+..++++|.++. ....++.|.+.+++.||....
T Consensus 5 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~G~~~~~ 71 (75)
T 1yjr_A 5 VLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDP---EIIGPRDIIHTIESLGFEPSL 71 (75)
T ss_dssp CEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECT---TTTHHHHHHHHHHHHHCEEEE
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECC---CCCCHHHHHHHHHHcCCCcee
Confidence 467889 999999999999999999999999999999999999873 235678899999999987543
No 27
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.35 E-value=3.4e-12 Score=83.22 Aligned_cols=75 Identities=24% Similarity=0.376 Sum_probs=63.5
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceE----EEeeCC
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQF----FISVSG 95 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~----~~~~~g 95 (110)
.++.|.+ ||+|++|+.+|++.|++++||..+.+|+.+++++|.++. ..++++.|.++++++||... .+.+.|
T Consensus 8 ~~~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~---~~~~~~~i~~~i~~~Gy~~~~~~~~l~V~G 84 (111)
T 2ofg_X 8 KTQQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDP---KQVSEITIQERIAALGYTLAEPKSSVTLNG 84 (111)
T ss_dssp EEEEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECT---TTCSHHHHHHHHHTTTCCEECCCCCCCCCC
T ss_pred eEEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECC---CCCCHHHHHHHHHHcCCeeeecceeeeccC
Confidence 4578999 999999999999999999999999999999999999873 24677899999999999743 344556
Q ss_pred hhH
Q 039056 96 LFA 98 (110)
Q Consensus 96 ~~~ 98 (110)
+.+
T Consensus 85 ~~~ 87 (111)
T 2ofg_X 85 HKH 87 (111)
T ss_dssp CCC
T ss_pred ccC
Confidence 654
No 28
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.34 E-value=2.8e-12 Score=80.22 Aligned_cols=61 Identities=16% Similarity=0.223 Sum_probs=56.3
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCc
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCY 87 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~ 87 (110)
.+..|.+ ||+|++|+.+|++.|++++||..+++|+..++++|.++ .+++.|.++|+++||.
T Consensus 22 ~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~------~~~~~i~~~i~~~Gy~ 83 (85)
T 2k2p_A 22 AGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGV------SDAAHIAEIITAAGYT 83 (85)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESC------CCHHHHHHHHHHTTCC
T ss_pred cEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEec------CCHHHHHHHHHHcCCC
Confidence 4578999 99999999999999999999999999999999999864 5789999999999986
No 29
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.34 E-value=5.8e-12 Score=75.47 Aligned_cols=68 Identities=19% Similarity=0.275 Sum_probs=59.4
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEE
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFI 91 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~ 91 (110)
.+..|.+ ||+|++|+.+|++.|.+++||..+.+|+..+++.|.++. ...+++.|.+.+++.||.....
T Consensus 3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~G~~~~~~ 71 (80)
T 1jww_A 3 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNP---KEASVSDLKEAVDKLGYKLKLK 71 (80)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECT---TTCCHHHHHHHHHHHTSEEEEC
T ss_pred eEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECC---CCCCHHHHHHHHHHcCCeEEec
Confidence 3467899 999999999999999999999999999999999999873 2467888999999999976543
No 30
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.34 E-value=9.4e-12 Score=82.86 Aligned_cols=82 Identities=13% Similarity=0.229 Sum_probs=69.5
Q ss_pred eeEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCce----------
Q 039056 20 FQVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQ---------- 88 (110)
Q Consensus 20 ~~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~---------- 88 (110)
.+++.|.+ ||+|++|+.+|++.|.+++||..+.+|+.++++.+.++. ...+++.+.+.+++.||..
T Consensus 3 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~G~~~~~~~~~~~~~ 79 (149)
T 2ew9_A 3 PQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDP---EVIQPLEIAQFIQDLGFEAAVMEDYAGSD 79 (149)
T ss_dssp CEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECT---TTCCHHHHHHHHHHHTCEEEECSCSCCSS
T ss_pred cEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcC---CCCCHHHHHHHHhcCCCceEeeccccccc
Confidence 35678999 999999999999999999999999999999999999863 2367788999999999864
Q ss_pred --EEEeeCChhHHHHHHh
Q 039056 89 --FFISVSGLFASAAFLR 104 (110)
Q Consensus 89 --~~~~~~g~~~~a~~~~ 104 (110)
+.+.+.||.+..|...
T Consensus 80 ~~~~~~v~gm~C~~C~~~ 97 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHN 97 (149)
T ss_dssp SEEEEEEESCCSHHHHHH
T ss_pred ceeEEEEEeccCHHHHHH
Confidence 3456779999877653
No 31
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.33 E-value=5.5e-12 Score=84.00 Aligned_cols=67 Identities=16% Similarity=0.225 Sum_probs=59.7
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEE
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFF 90 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~ 90 (110)
.++.|.+ ||+|++|+.+|++.|++++||..+.+|+.+++++|.++. ..+++++|.+++++.||...+
T Consensus 80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~Gy~~~~ 147 (149)
T 2ew9_A 80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDP---EIIGPRDIIKIIEEIGFHASL 147 (149)
T ss_dssp SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCT---TTSCHHHHHHHHHHHTCEEEC
T ss_pred ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECC---CCCCHHHHHHHHHhCCCceEe
Confidence 4578999 999999999999999999999999999999999999873 346789999999999997543
No 32
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.30 E-value=8.7e-12 Score=83.51 Aligned_cols=68 Identities=19% Similarity=0.275 Sum_probs=60.9
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEE
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFI 91 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~ 91 (110)
..+.|.+ ||+|++|+.+|++.|.+++||..+.+|+.+++++|.+++ ..++++.|.+++++.||....+
T Consensus 74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~Gy~~~~~ 142 (151)
T 1p6t_A 74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNP---KEASVSDLKEAVDKLGYKLKLK 142 (151)
T ss_dssp EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECT---TTCCHHHHHHHHHHHTCCEEES
T ss_pred cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECC---CCCCHHHHHHHHHHcCCCeEEc
Confidence 4578999 999999999999999999999999999999999999873 3478899999999999986543
No 33
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.29 E-value=9.9e-12 Score=72.89 Aligned_cols=58 Identities=24% Similarity=0.487 Sum_probs=52.6
Q ss_pred EEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCce
Q 039056 23 IVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQ 88 (110)
Q Consensus 23 ~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~ 88 (110)
..|.+ ||+|++|+.+|++.|.++ ||..+.+|+..++++|.++. . +.|.+++++.||..
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~------~-~~i~~~i~~~Gy~~ 61 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETEN------L-DSVLKKLEEIDYPV 61 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSC------H-HHHHHHHHTTTCCC
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECC------H-HHHHHHHHHcCCce
Confidence 57889 999999999999999999 99999999999999998761 2 78999999999874
No 34
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.28 E-value=3.7e-11 Score=75.46 Aligned_cols=70 Identities=20% Similarity=0.192 Sum_probs=60.8
Q ss_pred eeEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEEe
Q 039056 20 FQVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFIS 92 (110)
Q Consensus 20 ~~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~~ 92 (110)
..+..|.+ ||+|++|+.+|++.|.+++||..+.+|+..+++.|.++. ..+.++.|.+.+...||...+..
T Consensus 15 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~Gy~~~~~~ 85 (95)
T 2kkh_A 15 LQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDS---LLISPFQIAKALNEARLEANVRV 85 (95)
T ss_dssp SEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECT---TTCCHHHHHHHHHHHTCCEEESC
T ss_pred eEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECC---CCCCHHHHHHHHHHcCCceEEec
Confidence 34578999 999999999999999999999999999999999999873 23577899999999999765543
No 35
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.23 E-value=6.3e-11 Score=83.75 Aligned_cols=69 Identities=19% Similarity=0.338 Sum_probs=60.9
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEEe
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFIS 92 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~~ 92 (110)
.++.|.+ ||+|++|+.+|++.|.+++||..+.+|+..++++|.++. ..+.++.|.++|++.||...++.
T Consensus 122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~Gy~~~~~~ 191 (202)
T 2rop_A 122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNP---AVISPEELRAAIEDMGFEASVVS 191 (202)
T ss_dssp EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECT---TTCCHHHHHHHHHHHTSCEEEC-
T ss_pred eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECC---CCCCHHHHHHHHHHcCCceEEcC
Confidence 4578999 999999999999999999999999999999999999873 34678999999999999866544
No 36
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.20 E-value=8.9e-11 Score=78.50 Aligned_cols=81 Identities=17% Similarity=0.343 Sum_probs=68.9
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCc----eEEEeeCC
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCY----QFFISVSG 95 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~----~~~~~~~g 95 (110)
.+..|.+ ||+|++|+.+|++.|.+++||..+.+|+..+++.+.++. ...+++.+.+.+++.||. .+.+.+.|
T Consensus 6 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~G~~~~~~~~~~~v~g 82 (151)
T 1p6t_A 6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDP---AETGTAAIQEKIEKLGYHVVTEKAEFDIEG 82 (151)
T ss_dssp EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECT---TTSCHHHHHHHHHHHTCEECCEEEEEEESS
T ss_pred eEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcC---CcCCHHHHHHHHHHcCCcccccccEEEecC
Confidence 4567889 999999999999999999999999999999999998763 235678899999999984 45678889
Q ss_pred hhHHHHHHh
Q 039056 96 LFASAAFLR 104 (110)
Q Consensus 96 ~~~~a~~~~ 104 (110)
|.+..|...
T Consensus 83 m~C~~C~~~ 91 (151)
T 1p6t_A 83 MTCAACANR 91 (151)
T ss_dssp CCSSSHHHH
T ss_pred CCCHHHHHH
Confidence 999876543
No 37
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.19 E-value=1.1e-10 Score=82.48 Aligned_cols=62 Identities=19% Similarity=0.284 Sum_probs=55.0
Q ss_pred eeEEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhc
Q 039056 20 FQVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKIS 84 (110)
Q Consensus 20 ~~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~ 84 (110)
..++.|.| ||+|++|+.+|++.|.+++||..+.||+..++++|.++. ....++.|.+.+++.
T Consensus 19 ~~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~---~~~~~~~i~~~i~~~ 81 (202)
T 2rop_A 19 VVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDP---SCTSPVALQRAIEAL 81 (202)
T ss_dssp -CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECT---TTCCHHHHHHHHTTS
T ss_pred cEEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECC---CCCCHHHHHHHHHHh
Confidence 34578999 999999999999999999999999999999999999873 246778899999988
No 38
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.17 E-value=1.5e-10 Score=84.64 Aligned_cols=68 Identities=12% Similarity=0.264 Sum_probs=60.3
Q ss_pred EEEEEeeccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEEeeCC
Q 039056 22 VIVVTANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFISVSG 95 (110)
Q Consensus 22 ~~~~~Vgm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~~~~g 95 (110)
+++|.+.|+|.+|+.+|+++|++++||.++++|+.+++++|.+. .++++|.++++++||+..++..+.
T Consensus 7 ~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~------~~~~~I~~aI~~~Gy~a~~~~~~~ 74 (222)
T 1qup_A 7 EATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS------VAPSTIINTLRNCGKDAIIRGAGK 74 (222)
T ss_dssp EEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES------SCHHHHHHHHHHTTCCCEEECCSC
T ss_pred EEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEecc------CCHHHHHHHHHHcCCccccccCCC
Confidence 45777789999999999999999999999999999999999864 577999999999999877766543
No 39
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=99.15 E-value=8.9e-11 Score=69.33 Aligned_cols=59 Identities=20% Similarity=0.494 Sum_probs=50.8
Q ss_pred EEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEE
Q 039056 22 VIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFF 90 (110)
Q Consensus 22 ~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~ 90 (110)
+..|.+ ||+|++|+.+|++.|.+++||..+.+|+..++++|.++. . .+.+.++||.+.+
T Consensus 4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~------~----~~~i~~~Gy~~~~ 63 (71)
T 2aj0_A 4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEA------S----IQQVEQAGAFEHL 63 (71)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESC------C----HHHHHHHHTTTTC
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecC------c----HHHHHHhCCCccc
Confidence 467889 999999999999999999999999999999999998761 2 4577888987544
No 40
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.09 E-value=5.6e-10 Score=83.00 Aligned_cols=68 Identities=12% Similarity=0.264 Sum_probs=60.3
Q ss_pred EEEEEeeccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEEeeCC
Q 039056 22 VIVVTANMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFISVSG 95 (110)
Q Consensus 22 ~~~~~Vgm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~~~~g 95 (110)
++.|.+.|+|++|+.+|+++|++++||..+++|+.+++++|... .++++|.++|+++||...+++...
T Consensus 8 ~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~------~~~~~I~~aIe~~Gy~a~~~~~~~ 75 (249)
T 1jk9_B 8 EATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESS------VAPSTIINTLRNCGKDAIIRGAGK 75 (249)
T ss_dssp EEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEES------SCHHHHHHHHHTTTCCCEEEEESS
T ss_pred eEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecC------CCHHHHHHHHHHhCCCcccccCCc
Confidence 46777789999999999999999999999999999999999864 577999999999999877766543
No 41
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=98.96 E-value=1.7e-09 Score=90.06 Aligned_cols=64 Identities=19% Similarity=0.309 Sum_probs=58.4
Q ss_pred EEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCce
Q 039056 22 VIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQ 88 (110)
Q Consensus 22 ~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~ 88 (110)
++.|.+ ||+|++|+.+|++.|++++||.++++|+.+++++|.++. ...+++++.+++++.||+.
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~---~~~~~~~i~~ai~~~Gy~~ 67 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDE---KRIDFETIKRVIEDLGYGV 67 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECT---TTCCHHHHHHHHHHHCCEE
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCC---CcCCHHHHHHHHHhcCCcc
Confidence 367899 999999999999999999999999999999999999973 3478899999999999874
No 42
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=92.74 E-value=0.96 Score=27.30 Aligned_cols=56 Identities=11% Similarity=0.102 Sum_probs=42.8
Q ss_pred EEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEE
Q 039056 22 VIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFF 90 (110)
Q Consensus 22 ~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~ 90 (110)
..++.. |+.||...-+++++|.+++ ....+.|..+ ++.....|.+.+++.||.-+.
T Consensus 10 ~~~lD~rGl~CP~Pvl~~kkal~~l~---------~G~~l~V~~d----d~~a~~di~~~~~~~G~~~~~ 66 (82)
T 3lvj_C 10 DHTLDALGLRCPEPVMMVRKTVRNMQ---------PGETLLIIAD----DPATTRDIPGFCTFMEHELVA 66 (82)
T ss_dssp SEEEECTTCCTTHHHHHHHHHHHTSC---------TTCEEEEEEC----CTTHHHHHHHHHHHTTCEEEE
T ss_pred CEEEECCCCCCCHHHHHHHHHHHhCC---------CCCEEEEEEC----CccHHHHHHHHHHHCCCEEEE
Confidence 367888 9999999999999999864 3345666665 235567899999999986443
No 43
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=91.23 E-value=1.5 Score=27.57 Aligned_cols=57 Identities=14% Similarity=0.138 Sum_probs=44.3
Q ss_pred EEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEEe
Q 039056 23 IVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFIS 92 (110)
Q Consensus 23 ~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~~ 92 (110)
.++.. |+.|+.-.-+++++|.+++ ..+.+.|..+ ++.....|.+.+++.|+.-+...
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~---------~Ge~L~Vl~d----d~~a~~dI~~~~~~~G~~v~~~e 84 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMK---------PGEILEVWID----YPMSKERIPETVKKLGHEVLEIE 84 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCC---------TTCEEEEEES----SCTHHHHHHHHHHHSSCCEEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCC---------CCCEEEEEEC----CccHHHHHHHHHHHCCCEEEEEE
Confidence 57888 9999999999999999864 3356677665 23556889999999998755443
No 44
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=90.61 E-value=1.5 Score=27.61 Aligned_cols=56 Identities=9% Similarity=-0.009 Sum_probs=42.7
Q ss_pred EEEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEE
Q 039056 22 VIVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFF 90 (110)
Q Consensus 22 ~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~ 90 (110)
..++.. |+.||.-.-+++++|.+++ ..+.+.|..+ ++.....|.+.+++.|+.-+.
T Consensus 27 ~~~LD~rGl~CP~PvlktkkaL~~l~---------~Ge~L~Vl~d----d~~a~~dIp~~~~~~G~~v~~ 83 (97)
T 1je3_A 27 DYRLDMVGEPCPYPAVATLEAMPQLK---------KGEILEVVSD----CPQSINNIPLDARNHGYTVLD 83 (97)
T ss_dssp EEEECSBCCSSSSSTHHHHHHTTTCC---------SSCEEEEEEB----CSSSSCHHHHHHHHHTCSEEE
T ss_pred CeEEeCCCCCCCHHHHHHHHHHHcCC---------CCCEEEEEEC----CcchHHHHHHHHHHCCCEEEE
Confidence 467888 9999999999999998864 3345666665 234557799999999986544
No 45
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=87.68 E-value=1.9 Score=30.93 Aligned_cols=66 Identities=15% Similarity=0.060 Sum_probs=43.2
Q ss_pred ccccccccCCCceeEEEEEeeccChhHHHHHHHHHhcCCCcceEEEeCCC---------------CEEEEEecCCCCCCC
Q 039056 8 SLLYFEDLTLPSFQVIVVTANMGCTRCRGRVSQIISKLTGLEEYIVDVPN---------------KRVTVKADFGLNKNV 72 (110)
Q Consensus 8 s~~~~~~~~~~~~~~~~~~Vgm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~---------------~kv~V~~~~~~~~~~ 72 (110)
|.-.+|-..|+..+++.|. ++|=+-+|..+.+++||.++.+-+.+ ..|.|.+|+ ..+
T Consensus 13 ~~~~~~~~~m~~~~~a~fa-----gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp---~~i 84 (203)
T 1nwa_A 13 SSGHIEGRHMTSNQKAILA-----GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDP---TVT 84 (203)
T ss_dssp -------CCTTCCEEEEEE-----ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECT---TTC
T ss_pred ccccccCCCCCccceEEEe-----cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECC---CcC
Confidence 4445555566544556665 56667778889999999999887654 467888884 458
Q ss_pred ChHHHHHHH
Q 039056 73 KDDPTRSRV 81 (110)
Q Consensus 73 ~~~~I~~~i 81 (110)
+.++|++..
T Consensus 85 Sy~~LL~~F 93 (203)
T 1nwa_A 85 DYRTLLEFF 93 (203)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 888887654
No 46
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=87.19 E-value=1.7 Score=26.65 Aligned_cols=54 Identities=17% Similarity=0.151 Sum_probs=39.8
Q ss_pred EEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceE
Q 039056 24 VVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQF 89 (110)
Q Consensus 24 ~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~ 89 (110)
++.. |+.||.-.-+++++|.+++. ..+.+.|..+ ++.....|.+.+++.||.-+
T Consensus 3 ~lD~rGl~CP~Pvl~~kkal~~l~~--------~G~~L~V~~d----d~~a~~dI~~~~~~~G~~v~ 57 (87)
T 3hz7_A 3 TIDALGQVCPIPVIRAKKALAELGE--------AGGVVTVLVD----NDISRQNLQKMAEGMGYQSE 57 (87)
T ss_dssp EEECTTCCTTHHHHHHHHHHHTTGG--------GCCEEEEEES----SHHHHHHHHHHHHHHTCEEE
T ss_pred EEEcCCCCCCHHHHHHHHHHHhccC--------CCCEEEEEEC----CccHHHHHHHHHHHCCCEEE
Confidence 4677 99999999999999998630 1245566655 23455789999999998643
No 47
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=86.94 E-value=2.4 Score=26.97 Aligned_cols=62 Identities=16% Similarity=0.186 Sum_probs=41.7
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCcceE-----EEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCC
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGLEEY-----IVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGC 86 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v-----~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~ 86 (110)
..++|.| -.|-+. .-.+.+.|.+++||+.+ ++|..+..+.++-+ ...++.++|.+++++.|.
T Consensus 7 rRlVLDVlKPh~p~-i~d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiE---G~~id~d~I~~~IE~~Gg 74 (97)
T 2raq_A 7 IRIVLDILKPHEPI-IPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQ---GNDLDFDEITRAIESYGG 74 (97)
T ss_dssp EEEEEEEECCSCSC-HHHHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEE---CSSCCHHHHHHHHHHTTC
T ss_pred eEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEE---ecCCCHHHHHHHHHHcCC
Confidence 4567777 334444 34456678899998875 45556665544433 235899999999999994
No 48
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=85.23 E-value=2.3 Score=26.95 Aligned_cols=61 Identities=23% Similarity=0.367 Sum_probs=42.4
Q ss_pred eeEEEEEe--eccChhHHHHHHHHHhcCCCcceEE-----EeCCCC--EEEEEecCCCCCCCChHHHHHHHHhcCC
Q 039056 20 FQVIVVTA--NMGCTRCRGRVSQIISKLTGLEEYI-----VDVPNK--RVTVKADFGLNKNVKDDPTRSRVKISGC 86 (110)
Q Consensus 20 ~~~~~~~V--gm~C~~C~~~Vek~L~~i~GV~~v~-----Vdl~~~--kv~V~~~~~~~~~~~~~~I~~~i~~~G~ 86 (110)
...+++.| ++|-+.=. .+.+.|.+++||+.+. +|..+. ++++.++ .++.++|.+++++.|.
T Consensus 4 irRlVLDVlKP~h~P~iv-d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~-----~idfd~I~~~IE~~Gg 73 (96)
T 2x3d_A 4 IRRLVLDVLKPIRGTSIV-DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGT-----SLNFDDIRKMLEEEGC 73 (96)
T ss_dssp EEEEEEEEEEESSSSCHH-HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEES-----SCCHHHHHHHHHHTTC
T ss_pred eEEEEEEcccCCCCCCHH-HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec-----CCCHHHHHHHHHHcCC
Confidence 34567777 44655544 4566789999998764 445555 4455554 5899999999999994
No 49
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=84.63 E-value=1.3 Score=28.23 Aligned_cols=61 Identities=11% Similarity=0.208 Sum_probs=41.9
Q ss_pred eeEEEEEe-eccChhHHHHHHHHHhcCCCcceEE-----EeCCCC--EEEEEecCCCCCCCChHHHHHHHHhcCC
Q 039056 20 FQVIVVTA-NMGCTRCRGRVSQIISKLTGLEEYI-----VDVPNK--RVTVKADFGLNKNVKDDPTRSRVKISGC 86 (110)
Q Consensus 20 ~~~~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~-----Vdl~~~--kv~V~~~~~~~~~~~~~~I~~~i~~~G~ 86 (110)
...+++.| -.+-+. .-.+.+.|.+++||+.+. +|..+. ++++.++ .++.++|.++|++.|.
T Consensus 6 iRRlVLDVlKPh~P~-ivdlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~-----dIdfd~I~~~IE~~Gg 74 (100)
T 3bpd_A 6 LRRLVLDVLKPHEPK-TIVFALKLSELENVDGVNIHLSEIDQATENIKITILGN-----NLDYEQIKGVIEDMGG 74 (100)
T ss_dssp EEEEEEEEEEESCSC-HHHHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEE-----EECHHHHHHHHHTTTC
T ss_pred ceEEEEEecCCCCCC-HHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEec-----CCCHHHHHHHHHHcCC
Confidence 34567777 334444 445667789999998764 444555 4555554 4899999999999994
No 50
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=82.53 E-value=0.8 Score=27.20 Aligned_cols=52 Identities=12% Similarity=0.077 Sum_probs=39.3
Q ss_pred EEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCc
Q 039056 23 IVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCY 87 (110)
Q Consensus 23 ~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~ 87 (110)
.++.. |+.||.-.-++.++|.+++ ..+.+.|..+ ++.....|.+.++..|+.
T Consensus 7 ~~lD~rGl~CP~Pvl~~k~al~~l~---------~G~~L~V~~d----d~~a~~di~~~~~~~G~~ 59 (78)
T 1pav_A 7 RVIDARGSYCPGPLMELIKAYKQAK---------VGEVISVYST----DAGTKKDAPAWIQKSGQE 59 (78)
T ss_dssp CCCCBSSCSSCTTHHHHHHHHTTSC---------TTCCEECCBS----SSCHHHHHHHHHHHHTEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHcCC---------CCCEEEEEEC----CccHHHHHHHHHHHCCCE
Confidence 35777 9999999999999998864 3345566554 234567889999999975
No 51
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=82.37 E-value=1.3 Score=27.98 Aligned_cols=34 Identities=24% Similarity=0.429 Sum_probs=25.1
Q ss_pred EEEEeeccChhH------HHHHHHHH-hcCCCcceEEEeCC
Q 039056 23 IVVTANMGCTRC------RGRVSQII-SKLTGLEEYIVDVP 56 (110)
Q Consensus 23 ~~~~Vgm~C~~C------~~~Vek~L-~~i~GV~~v~Vdl~ 56 (110)
+.+.+-++.++| ...|+.+| .+++|+..++|++.
T Consensus 46 V~V~ltlt~p~cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~ 86 (108)
T 3lno_A 46 AVITMTMTSIGCPMAGQIVSDVKKVLSTNVPEVNEIEVNVV 86 (108)
T ss_dssp EEEEECCSCTTCTTHHHHHHHHHHHHHHHCTTCCCEEEEEC
T ss_pred EEEEEEECCCCCcHHHHHHHHHHHHHHHhCCCCceEEEEEE
Confidence 455555666666 56788899 89999988887653
No 52
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=80.86 E-value=1.9 Score=26.93 Aligned_cols=34 Identities=32% Similarity=0.480 Sum_probs=25.7
Q ss_pred EEEEeeccChhHH------HHHHHHHhcCCCcceEEEeCC
Q 039056 23 IVVTANMGCTRCR------GRVSQIISKLTGLEEYIVDVP 56 (110)
Q Consensus 23 ~~~~Vgm~C~~C~------~~Vek~L~~i~GV~~v~Vdl~ 56 (110)
+.+.+.+++++|- ..|+.+|..++|+..++|++.
T Consensus 43 V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 43 AYVRMTLTTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp EEEEECCSSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred EEEEEEECCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 4455666777764 578999999999999888753
No 53
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=77.18 E-value=12 Score=26.64 Aligned_cols=47 Identities=13% Similarity=0.034 Sum_probs=36.3
Q ss_pred hhHHHHHHHHHhcCCCcceEEEeCCCCE-------------------EEEEecCCCCCCCChHHHHHHH
Q 039056 32 TRCRGRVSQIISKLTGLEEYIVDVPNKR-------------------VTVKADFGLNKNVKDDPTRSRV 81 (110)
Q Consensus 32 ~~C~~~Vek~L~~i~GV~~v~Vdl~~~k-------------------v~V~~~~~~~~~~~~~~I~~~i 81 (110)
.+|=+-+|..+.+++||.++.+-+..+. |.|.+|+ ..++.++|++..
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp---~~isy~~LL~~F 115 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQP---EHISFEELLKVF 115 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECT---TTSCHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECC---CcCCHHHHHHHH
Confidence 4566667788899999999988876554 8889984 458888887665
No 54
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=76.69 E-value=2.1 Score=26.63 Aligned_cols=34 Identities=21% Similarity=0.400 Sum_probs=24.2
Q ss_pred EEEEeeccChhHH------HHHHHHHhcCCCcceEEEeCC
Q 039056 23 IVVTANMGCTRCR------GRVSQIISKLTGLEEYIVDVP 56 (110)
Q Consensus 23 ~~~~Vgm~C~~C~------~~Vek~L~~i~GV~~v~Vdl~ 56 (110)
+.+.+-++.++|- ..|+++|..++|+..++|++.
T Consensus 44 V~v~l~lt~~~cp~~~~l~~~i~~al~~l~gv~~v~V~l~ 83 (103)
T 1uwd_A 44 VKVLMTMTTPMCPLAGMILSDAEEAIKKIEGVNNVEVELT 83 (103)
T ss_dssp EEEEECCSSSCCSSHHHHHHHHHHHHHTSSSCCEEEEEEC
T ss_pred EEEEEEECCCCCcHHHHHHHHHHHHHHhCCCcceEEEEEe
Confidence 4455555555553 568888999999998888753
No 55
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=76.26 E-value=5.3 Score=27.66 Aligned_cols=47 Identities=17% Similarity=0.159 Sum_probs=37.3
Q ss_pred hhHHHHHHHHHhcCCCcceEEEeCCCC---------------EEEEEecCCCCCCCChHHHHHHH
Q 039056 32 TRCRGRVSQIISKLTGLEEYIVDVPNK---------------RVTVKADFGLNKNVKDDPTRSRV 81 (110)
Q Consensus 32 ~~C~~~Vek~L~~i~GV~~v~Vdl~~~---------------kv~V~~~~~~~~~~~~~~I~~~i 81 (110)
++|=.-+|..+.+++||.++.+-+.++ .|.|.+|+ ..++.++|++..
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp---~~isy~~LL~~F 70 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDP---ERISYRRILELF 70 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECT---TTCCHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECC---CCCCHHHHHHHH
Confidence 567777888999999999998887654 78888984 468888887654
No 56
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=72.95 E-value=11 Score=26.62 Aligned_cols=47 Identities=15% Similarity=0.190 Sum_probs=35.9
Q ss_pred hhHHHHHHHHHhcCCCcceEEEeCCCCE-------------------EEEEecCCCCCCCChHHHHHHH
Q 039056 32 TRCRGRVSQIISKLTGLEEYIVDVPNKR-------------------VTVKADFGLNKNVKDDPTRSRV 81 (110)
Q Consensus 32 ~~C~~~Vek~L~~i~GV~~v~Vdl~~~k-------------------v~V~~~~~~~~~~~~~~I~~~i 81 (110)
++|=+-++..+.+++||.++.+-+.++. |.|.+|+ ..++.++|++..
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp---~~isy~~LL~~f 74 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDA---DKLSLDDILQYF 74 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEET---TTCCHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECC---CcCCHHHHHHHH
Confidence 5666677888899999999988765543 8888984 458888887654
No 57
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=72.75 E-value=17 Score=25.96 Aligned_cols=47 Identities=11% Similarity=0.011 Sum_probs=36.0
Q ss_pred hhHHHHHHHHHhcCCCcceEEEeCCCC-------------------EEEEEecCCCCCCCChHHHHHHH
Q 039056 32 TRCRGRVSQIISKLTGLEEYIVDVPNK-------------------RVTVKADFGLNKNVKDDPTRSRV 81 (110)
Q Consensus 32 ~~C~~~Vek~L~~i~GV~~v~Vdl~~~-------------------kv~V~~~~~~~~~~~~~~I~~~i 81 (110)
.+|=+-+|..+.+++||.++.+-+..+ .|.|.+|+ ..++.++|.+..
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp---~~isy~~LL~~F 114 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDP---SVISYEQLLQVF 114 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECT---TTSCHHHHHHHH
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECC---CcCCHHHHHHHH
Confidence 456666777889999999998887643 48889984 458888887765
No 58
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=68.23 E-value=7.9 Score=28.68 Aligned_cols=47 Identities=19% Similarity=0.162 Sum_probs=36.2
Q ss_pred hhHHHHHHHHHhcCCCcceEEEeCCCCE-------------------EEEEecCCCCCCCChHHHHHHH
Q 039056 32 TRCRGRVSQIISKLTGLEEYIVDVPNKR-------------------VTVKADFGLNKNVKDDPTRSRV 81 (110)
Q Consensus 32 ~~C~~~Vek~L~~i~GV~~v~Vdl~~~k-------------------v~V~~~~~~~~~~~~~~I~~~i 81 (110)
.+|=+-+|+.+.+++||.++.+-+.++. |.|.+|+ ..++.++|.+..
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP---~~ISy~~LL~~F 166 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDP---KECSFDTLIDVL 166 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECT---TTSCHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECC---CcCCHHHHHHHH
Confidence 5666677888899999999988876553 8889984 457888887654
No 59
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=64.73 E-value=17 Score=27.57 Aligned_cols=47 Identities=23% Similarity=0.180 Sum_probs=36.9
Q ss_pred hhHHHHHHHHHhcCCCcceEEEeCCCCE-----------------EEEEecCCCCCCCChHHHHHHH
Q 039056 32 TRCRGRVSQIISKLTGLEEYIVDVPNKR-----------------VTVKADFGLNKNVKDDPTRSRV 81 (110)
Q Consensus 32 ~~C~~~Vek~L~~i~GV~~v~Vdl~~~k-----------------v~V~~~~~~~~~~~~~~I~~~i 81 (110)
++|=.-++..+.+++||.++.+-+.++. |.|.+|+ ..++.++|++..
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp---~~isy~~LL~~f 72 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDE---KEVSLREILLYY 72 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECT---TTSCHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECC---CcCCHHHHHHHH
Confidence 5677778888999999999988876553 8888984 468888887654
No 60
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=57.16 E-value=31 Score=21.24 Aligned_cols=47 Identities=13% Similarity=0.220 Sum_probs=32.6
Q ss_pred hhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHh
Q 039056 32 TRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKI 83 (110)
Q Consensus 32 ~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~ 83 (110)
++=...|.+.|.++||++-.-++-..+++.|.-+. .+.+.+.+.+.+
T Consensus 16 p~~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa-----~~~~~l~~~i~~ 62 (95)
T 2jsx_A 16 SERISDISTQLNAFPGCEVAVSDAPSGQLIVVVEA-----EDSETLIQTIES 62 (95)
T ss_dssp TTSHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEE-----SSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEe-----CCHHHHHHHHHH
Confidence 55588999999999999544566667888887662 244555555543
No 61
>3pim_A Peptide methionine sulfoxide reductase; methionine-S-sulfoxide reductase, oxidoreductase; 1.90A {Saccharomyces cerevisiae} PDB: 3pil_A 3pin_B
Probab=44.40 E-value=39 Score=23.66 Aligned_cols=53 Identities=13% Similarity=0.115 Sum_probs=36.6
Q ss_pred eEEEEEeeccChhHHHHHHHHHhcC--CCcceEEEeCCCC-------------------------EEEEEecCCCCCCCC
Q 039056 21 QVIVVTANMGCTRCRGRVSQIISKL--TGLEEYIVDVPNK-------------------------RVTVKADFGLNKNVK 73 (110)
Q Consensus 21 ~~~~~~Vgm~C~~C~~~Vek~L~~i--~GV~~v~Vdl~~~-------------------------kv~V~~~~~~~~~~~ 73 (110)
+++.|. ++|=+-+|..+.++ +||.++.+-+.++ .|.|.+|+ ..++
T Consensus 20 ~~a~fa-----gGCFWg~E~~F~~l~g~GV~~t~~GYagG~~~~~n~~~~PtY~~Vc~g~TGHaEaV~V~yDp---~~is 91 (187)
T 3pim_A 20 KLITLA-----CGCFWGTEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQVSYNP---KVIT 91 (187)
T ss_dssp EEEEEE-----SSCHHHHHHHHHHHHGGGSSEEEEEEEEECCC---------CSCBTTBCTTCEEEEEEEECT---TTSC
T ss_pred cEEEEe-----cCCchhhHHHHHHhcCCCeEEEEeeecCCcccCCCCCCCCchhhhccCCCCCeEEEEEEECC---ccCC
Confidence 445554 55666677777777 8898887665544 27888884 4588
Q ss_pred hHHHHHHH
Q 039056 74 DDPTRSRV 81 (110)
Q Consensus 74 ~~~I~~~i 81 (110)
.++|++..
T Consensus 92 y~~LL~~F 99 (187)
T 3pim_A 92 LRELTDFF 99 (187)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887765
No 62
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=38.25 E-value=20 Score=24.99 Aligned_cols=74 Identities=15% Similarity=0.211 Sum_probs=42.8
Q ss_pred EEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEEeeCChhHHHH
Q 039056 23 IVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFISVSGLFASAA 101 (110)
Q Consensus 23 ~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~~~~g~~~~a~ 101 (110)
.++-| ---|..|+..|-..|.+.+||..+-+-.. .+..+ ++ .-..-.+.++++|..-...... -.-.+
T Consensus 85 ~TlYvTlePC~~Ca~aIi~al~~~~gI~rVV~~~~------d~~~~--~p-~~~~g~~~L~~aGI~V~~~~~~--e~~~~ 153 (190)
T 2nyt_A 85 VTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGR------LFMWE--EP-EIQAALKKLKEAGCKLRIMKPQ--DFEYV 153 (190)
T ss_pred eEEEEEcChHHHHHHHHHHhhhhcCCccEEEEEee------cCCcC--Ch-HHHHHHHHHHHCCCEEEEecHH--HHHHH
Confidence 44445 44799999999999999999865544211 11000 00 1135677889999765443322 22355
Q ss_pred HHhhhh
Q 039056 102 FLRFKQ 107 (110)
Q Consensus 102 ~~~~~~ 107 (110)
+..|..
T Consensus 154 w~~fv~ 159 (190)
T 2nyt_A 154 WQNFVE 159 (190)
T ss_pred HHHHHH
Confidence 555554
No 63
>4e6k_G BFD, bacterioferritin-associated ferredoxin; protein complex, iron storage, iron binding, iron mobilizati ferritin, iron homeostasis; HET: HEM; 2.00A {Pseudomonas aeruginosa}
Probab=33.68 E-value=16 Score=21.58 Aligned_cols=19 Identities=16% Similarity=0.529 Sum_probs=16.0
Q ss_pred EeeccChhHHHHHHHHHhc
Q 039056 26 TANMGCTRCRGRVSQIISK 44 (110)
Q Consensus 26 ~Vgm~C~~C~~~Vek~L~~ 44 (110)
..|+.|+.|...|++.|.+
T Consensus 33 ~aGt~CG~C~~~i~~il~~ 51 (73)
T 4e6k_G 33 GVGTQCGKCASLAKQVVRE 51 (73)
T ss_dssp CTTSSSCTTHHHHHHHHHH
T ss_pred CCCCCCCchHHHHHHHHHH
Confidence 3478899999999998875
No 64
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=30.85 E-value=24 Score=26.70 Aligned_cols=41 Identities=20% Similarity=0.221 Sum_probs=35.9
Q ss_pred EEEEe-eccChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEE
Q 039056 23 IVVTA-NMGCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVK 63 (110)
Q Consensus 23 ~~~~V-gm~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~ 63 (110)
+++.+ |+.|++...++++.+.++..-+.++|-+.+++..+.
T Consensus 322 ~~~~~~g~~~~~p~~~~~~~~~~~~~g~~~~v~~~~~~~~~~ 363 (373)
T 1okg_A 322 MTLKVDGAPCERPDAEVQSAATHLHAGEAATVYFKSGRVVTI 363 (373)
T ss_dssp CCEEETTEEESSCCHHHHHHHTTCBTTCEEEEEETTSCEEEE
T ss_pred eeeeccCcccCCcHHHHHHHHHhcCCCCcEEEEEccCcEEEE
Confidence 56778 999999999999999999988899999988866654
No 65
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=30.20 E-value=88 Score=18.50 Aligned_cols=33 Identities=21% Similarity=0.181 Sum_probs=18.4
Q ss_pred EEEEe-eccChhHHHHH---HHHHhcCCCcceEEEeC
Q 039056 23 IVVTA-NMGCTRCRGRV---SQIISKLTGLEEYIVDV 55 (110)
Q Consensus 23 ~~~~V-gm~C~~C~~~V---ek~L~~i~GV~~v~Vdl 55 (110)
+.+.. .-+|+.|..-. ++.....+++.-+.+|.
T Consensus 34 vlv~F~a~wC~~C~~~~p~l~~l~~~~~~v~~~~vd~ 70 (116)
T 3qfa_C 34 VVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDV 70 (116)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHTTCTTSEEEEEET
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 44445 67999998643 33334445544444443
No 66
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=29.68 E-value=26 Score=24.88 Aligned_cols=27 Identities=19% Similarity=0.303 Sum_probs=21.6
Q ss_pred EEEEEe-eccChhHHHHHHHHHhcCCCc
Q 039056 22 VIVVTA-NMGCTRCRGRVSQIISKLTGL 48 (110)
Q Consensus 22 ~~~~~V-gm~C~~C~~~Vek~L~~i~GV 48 (110)
.++.-+ ---|+.|+.+|..-|.+-+.|
T Consensus 101 ~vTwy~SWSPC~~CA~~v~~FL~~~~~v 128 (203)
T 3v4k_A 101 RVTCFTSWSPCFSCAQEMAKFISKNKHV 128 (203)
T ss_pred EEEEEEeCCChHHHHHHHHHHHhhCCCe
Confidence 455556 457999999999999988765
No 67
>3vow_A Probable DNA DC->DU-editing enzyme apobec-3C; antiviral deffense, HOST-virus interaction, metal- HIV-1 VIF, BET, single domain, sivagm, hydrolase; 2.15A {Homo sapiens} PDB: 3vm8_A
Probab=29.65 E-value=28 Score=24.50 Aligned_cols=28 Identities=14% Similarity=0.408 Sum_probs=22.0
Q ss_pred eEEEEEe-eccChhHHHHHHHHHhcCCCc
Q 039056 21 QVIVVTA-NMGCTRCRGRVSQIISKLTGL 48 (110)
Q Consensus 21 ~~~~~~V-gm~C~~C~~~Vek~L~~i~GV 48 (110)
-.++.-+ =--|..|+.+|..-|.+.+.|
T Consensus 86 y~VTwy~SwSPC~~CA~~va~FL~~~~~v 114 (190)
T 3vow_A 86 YQVTWYTSWSPCPDCAGEVAEFLARHSNV 114 (190)
T ss_dssp EEEEEEEEECCCHHHHHHHHHHHHHCTTE
T ss_pred EEEEEEEeCCchHHHHHHHHHHHHhCCCe
Confidence 3466656 457999999999999987765
No 68
>2v50_A Multidrug resistance protein MEXB; DDM, RND, membrane, detergent, transport, cell membrane, transmembrane, membrane protein; HET: LMT; 3.00A {Pseudomonas aeruginosa PA01}
Probab=26.11 E-value=1e+02 Score=26.43 Aligned_cols=50 Identities=10% Similarity=0.125 Sum_probs=36.4
Q ss_pred HHHHHHHHhcCCCcceEEEeCCCCEEEEEecCC--CCCCCChHHHHHHHHhc
Q 039056 35 RGRVSQIISKLTGLEEYIVDVPNKRVTVKADFG--LNKNVKDDPTRSRVKIS 84 (110)
Q Consensus 35 ~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~--~~~~~~~~~I~~~i~~~ 84 (110)
...+++.|.++|||.+++.+-....+.|..+++ ..-.++++++.++++..
T Consensus 159 ~~~i~~~L~~i~gv~~v~~~g~~~~i~i~id~~kl~~~Gls~~~v~~~l~~~ 210 (1052)
T 2v50_A 159 VSNIQDPLSRTKGVGDFQVFGSQYSMRIWLDPAKLNSYQLTPGDVSSAIQAQ 210 (1052)
T ss_dssp HHHTHHHHHTSTTEEEEEESSCCEEEEEEECHHHHTTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCceEEEecCCcEEEEEEeCHHHHHHcCCCHHHHHHHHHhc
Confidence 457999999999999999875445666665532 12357888898888654
No 69
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=25.07 E-value=47 Score=18.34 Aligned_cols=27 Identities=26% Similarity=0.538 Sum_probs=15.4
Q ss_pred eccChhHHHHHHHHHhcC----CCcceEEEeC
Q 039056 28 NMGCTRCRGRVSQIISKL----TGLEEYIVDV 55 (110)
Q Consensus 28 gm~C~~C~~~Vek~L~~i----~GV~~v~Vdl 55 (110)
.-+|+.|... ++.|.++ +|+.-..+|.
T Consensus 8 ~~~C~~C~~~-~~~l~~l~~~~~~i~~~~vdi 38 (85)
T 1ego_A 8 RSGCPYCVRA-KDLAEKLSNERDDFQYQYVDI 38 (85)
T ss_dssp CTTSTHHHHH-HHHHHHHHHHHSSCEEEEECH
T ss_pred CCCCCCHHHH-HHHHHHHHhcCCCceEEEEec
Confidence 3589999764 4455543 4554444443
No 70
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=24.46 E-value=79 Score=17.23 Aligned_cols=20 Identities=15% Similarity=0.620 Sum_probs=13.0
Q ss_pred eccChhHHHHHHHHHhcCCCcc
Q 039056 28 NMGCTRCRGRVSQIISKLTGLE 49 (110)
Q Consensus 28 gm~C~~C~~~Vek~L~~i~GV~ 49 (110)
.-+|+.|.. ++..|.+. |+.
T Consensus 8 ~~~C~~C~~-~~~~l~~~-~i~ 27 (81)
T 1h75_A 8 RNDCVQCHA-TKRAMENR-GFD 27 (81)
T ss_dssp CTTCHHHHH-HHHHHHHT-TCC
T ss_pred CCCChhHHH-HHHHHHHC-CCC
Confidence 357999975 56667653 443
No 71
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=24.17 E-value=1e+02 Score=17.24 Aligned_cols=16 Identities=19% Similarity=0.337 Sum_probs=10.9
Q ss_pred EEEEe-eccChhHHHHH
Q 039056 23 IVVTA-NMGCTRCRGRV 38 (110)
Q Consensus 23 ~~~~V-gm~C~~C~~~V 38 (110)
+.+.. .-+|+.|..-.
T Consensus 21 ~~v~f~~~~C~~C~~~~ 37 (105)
T 1fb6_A 21 VMVDFWAPWCGPCKLIA 37 (105)
T ss_dssp EEEEEECTTCHHHHHHH
T ss_pred EEEEEECCCChHHHHHH
Confidence 44444 78999997654
No 72
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=23.45 E-value=88 Score=16.58 Aligned_cols=25 Identities=24% Similarity=0.578 Sum_probs=14.7
Q ss_pred eccChhHHHHHHHHHhcCCCcceEEEe
Q 039056 28 NMGCTRCRGRVSQIISKLTGLEEYIVD 54 (110)
Q Consensus 28 gm~C~~C~~~Vek~L~~i~GV~~v~Vd 54 (110)
.-+|+.|.. +...|... |+.-..+|
T Consensus 8 ~~~C~~C~~-~~~~l~~~-~i~~~~~d 32 (75)
T 1r7h_A 8 KPACVQCTA-TKKALDRA-GLAYNTVD 32 (75)
T ss_dssp CTTCHHHHH-HHHHHHHT-TCCCEEEE
T ss_pred CCCChHHHH-HHHHHHHc-CCCcEEEE
Confidence 357999975 55566654 44333333
No 73
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=22.55 E-value=1.2e+02 Score=17.33 Aligned_cols=33 Identities=12% Similarity=0.277 Sum_probs=19.2
Q ss_pred EEEEe-eccChhHHHH---HHHHHhcCCCcceEEEeC
Q 039056 23 IVVTA-NMGCTRCRGR---VSQIISKLTGLEEYIVDV 55 (110)
Q Consensus 23 ~~~~V-gm~C~~C~~~---Vek~L~~i~GV~~v~Vdl 55 (110)
+.+.. .-+|+.|..- +++.....+++.-+.+|.
T Consensus 21 vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~vd~ 57 (105)
T 4euy_A 21 VLLFIKTENCGVCDVMLRKVNYVLENYNYVEKIEILL 57 (105)
T ss_dssp EEEEEEESSCHHHHHHHHHHHHHHHTCTTEEEEEEEE
T ss_pred EEEEEeCCCCcchHHHHHHHHHHHHHcCCceEEEEEC
Confidence 44445 6789999863 334344445555555554
No 74
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=22.16 E-value=1.4e+02 Score=17.99 Aligned_cols=33 Identities=15% Similarity=0.234 Sum_probs=18.4
Q ss_pred EEEEe-eccChhHHHHH---HHHHhcCCCcceEEEeC
Q 039056 23 IVVTA-NMGCTRCRGRV---SQIISKLTGLEEYIVDV 55 (110)
Q Consensus 23 ~~~~V-gm~C~~C~~~V---ek~L~~i~GV~~v~Vdl 55 (110)
+.+.. .-+|+.|..-. ++.....+++.-+.+|.
T Consensus 49 vvv~f~a~wC~~C~~~~~~l~~l~~~~~~v~~~~v~~ 85 (139)
T 3d22_A 49 VLANFSARWCGPSRQIAPYYIELSENYPSLMFLVIDV 85 (139)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEET
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 34444 67999997643 33333445555555544
No 75
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=21.98 E-value=85 Score=17.56 Aligned_cols=16 Identities=6% Similarity=0.189 Sum_probs=14.0
Q ss_pred CChHHHHHHHHhcCCc
Q 039056 72 VKDDPTRSRVKISGCY 87 (110)
Q Consensus 72 ~~~~~I~~~i~~~G~~ 87 (110)
....++.+.|++.|+.
T Consensus 5 ~~~~elik~L~~~G~~ 20 (70)
T 1whz_A 5 PRPEEVARKLRRLGFV 20 (70)
T ss_dssp CCHHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHHCCCE
Confidence 5678999999999985
No 76
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=21.21 E-value=1.3e+02 Score=17.27 Aligned_cols=33 Identities=24% Similarity=0.368 Sum_probs=17.9
Q ss_pred EEEEe-eccChhHHHHH---HHHHhcCCCcceEEEeC
Q 039056 23 IVVTA-NMGCTRCRGRV---SQIISKLTGLEEYIVDV 55 (110)
Q Consensus 23 ~~~~V-gm~C~~C~~~V---ek~L~~i~GV~~v~Vdl 55 (110)
+.+.. .-+|+.|..-. ++.....+++.-+.+|.
T Consensus 31 ~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~~ 67 (118)
T 2vm1_A 31 VIIDFTASWCGPCRVIAPVFAEYAKKFPGAIFLKVDV 67 (118)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHCTTSEEEEEET
T ss_pred EEEEEECCCCHhHHHHhHHHHHHHHHCCCcEEEEEEc
Confidence 34444 67999997643 33333444554444443
No 77
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=20.80 E-value=83 Score=18.91 Aligned_cols=59 Identities=12% Similarity=0.158 Sum_probs=31.5
Q ss_pred cChhHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhcCCceEEEeeCCh
Q 039056 30 GCTRCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKISGCYQFFISVSGL 96 (110)
Q Consensus 30 ~C~~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~G~~~~~~~~~g~ 96 (110)
.-......++++|.+. |..++ .+++..+.|.....-.+-|...+++.||+.+.+.+-|.
T Consensus 30 eleralqelekalara-garnv-------qitisaendeqakelleliarllqklgykdinvrvngt 88 (96)
T 2jvf_A 30 ELERALQELEKALARA-GARNV-------QITISAENDEQAKELLELIARLLQKLGYKDINVRVNGT 88 (96)
T ss_dssp HHHHHHHHHHHHHHHH-TCSEE-------EEEEECSSHHHHHHHHHHHHHHHHHHTCSEEEEEEETT
T ss_pred HHHHHHHHHHHHHHhc-cccce-------EEEEEecChHHHHHHHHHHHHHHHHhCCCceEEEEcCE
Confidence 3345556667776652 43333 33444331100011123356778999999988877664
No 78
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=20.75 E-value=45 Score=21.29 Aligned_cols=10 Identities=20% Similarity=0.607 Sum_probs=8.5
Q ss_pred eccChhHHHH
Q 039056 28 NMGCTRCRGR 37 (110)
Q Consensus 28 gm~C~~C~~~ 37 (110)
+..|++|..-
T Consensus 30 dy~Cp~C~~~ 39 (184)
T 4dvc_A 30 SFYCPHCNTF 39 (184)
T ss_dssp CTTCHHHHHH
T ss_pred CCCCHhHHHH
Confidence 8999999753
No 79
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=20.59 E-value=1.5e+02 Score=17.88 Aligned_cols=33 Identities=15% Similarity=0.238 Sum_probs=18.6
Q ss_pred EEEEe-eccChhHHHHHH------HHHhcCCCcceEEEeC
Q 039056 23 IVVTA-NMGCTRCRGRVS------QIISKLTGLEEYIVDV 55 (110)
Q Consensus 23 ~~~~V-gm~C~~C~~~Ve------k~L~~i~GV~~v~Vdl 55 (110)
+.+.. .-+|+.|..-.. +.....+++.-+.+|.
T Consensus 34 vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~~~~~~vd~ 73 (134)
T 2fwh_A 34 VMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQANV 73 (134)
T ss_dssp EEEEEECTTCHHHHHHHHHTTTSHHHHHHTTTSEEEEEEC
T ss_pred EEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCcEEEEEeC
Confidence 44444 679999987442 2233445555555554
No 80
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.47 E-value=1.7e+02 Score=18.54 Aligned_cols=63 Identities=11% Similarity=-0.039 Sum_probs=45.2
Q ss_pred ccCCCceeEEEEEe-eccCh-hHHHHHHHHHhcCCCcceEEEeCCCCEEEEEecCCCCCCCChHHHHHHHHhc
Q 039056 14 DLTLPSFQVIVVTA-NMGCT-RCRGRVSQIISKLTGLEEYIVDVPNKRVTVKADFGLNKNVKDDPTRSRVKIS 84 (110)
Q Consensus 14 ~~~~~~~~~~~~~V-gm~C~-~C~~~Vek~L~~i~GV~~v~Vdl~~~kv~V~~~~~~~~~~~~~~I~~~i~~~ 84 (110)
++.++.. ..+.| |+... -+...|+..++....|..|++........|.++ .++++-.+++.+.
T Consensus 12 ~~~~~~G--~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g~~tgfVrf~------~~~~~A~~av~~l 76 (121)
T 1owx_A 12 SLEEKIG--CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFK------EKAKEALGKAKDA 76 (121)
T ss_dssp CCSCCCC--CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEES------SCHHHHHHHHHHT
T ss_pred cccccCC--eEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEEC------CChHHHHHHHHHh
Confidence 4445433 45556 66666 789999999999888999999888889999986 1134555666654
No 81
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=20.16 E-value=1.4e+02 Score=17.16 Aligned_cols=28 Identities=14% Similarity=0.213 Sum_probs=18.8
Q ss_pred eeccChhHH-----HHHHHHHhcCCCcceEEEeC
Q 039056 27 ANMGCTRCR-----GRVSQIISKLTGLEEYIVDV 55 (110)
Q Consensus 27 Vgm~C~~C~-----~~Vek~L~~i~GV~~v~Vdl 55 (110)
.--.|+.|. .++++.|... |+.-..+|+
T Consensus 8 ~~~~C~~c~~~~~~~~ak~~L~~~-~i~~~~~di 40 (93)
T 1t1v_A 8 STSVTGSREIKSQQSEVTRILDGK-RIQYQLVDI 40 (93)
T ss_dssp ECSSCSCHHHHHHHHHHHHHHHHT-TCCCEEEET
T ss_pred EcCCCCCchhhHHHHHHHHHHHHC-CCceEEEEC
Confidence 345799997 8888888763 554444444
Done!