Query 039061
Match_columns 399
No_of_seqs 115 out of 444
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 05:56:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039061.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039061hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2592 Tumor differentially e 100.0 5E-126 1E-130 933.1 25.1 388 1-399 4-426 (426)
2 PF03348 Serinc: Serine incorp 100.0 8E-121 2E-125 933.2 32.9 389 5-398 1-429 (429)
3 PF08426 ICE2: ICE2; InterPro 61.4 1.3E+02 0.0029 31.5 12.2 159 79-241 30-225 (412)
4 PF11241 DUF3043: Protein of u 28.7 95 0.0021 28.7 4.6 56 99-158 67-122 (170)
5 PF14007 YtpI: YtpI-like prote 27.3 70 0.0015 26.4 3.1 52 109-161 26-77 (89)
6 PRK10263 DNA translocase FtsK; 26.7 7.2E+02 0.016 30.3 12.1 28 71-98 62-94 (1355)
7 PF14163 SieB: Superinfection 23.6 1.2E+02 0.0027 26.7 4.3 33 138-172 34-66 (151)
8 MTH00136 ND3 NADH dehydrogenas 23.3 1.7E+02 0.0038 24.9 5.0 14 155-168 97-110 (116)
9 PF13334 DUF4094: Domain of un 23.3 79 0.0017 26.3 2.8 20 336-355 6-27 (95)
10 MTH00042 ND3 NADH dehydrogenas 23.1 1.7E+02 0.0038 24.9 4.9 14 155-168 97-110 (116)
11 PRK10599 calcium/sodium:proton 22.2 3.4E+02 0.0074 28.1 7.6 27 197-223 108-134 (366)
12 PRK06602 NADH:ubiquinone oxido 22.1 1.8E+02 0.0038 25.1 4.8 14 155-168 103-116 (121)
13 PRK15487 O-antigen ligase RfaL 21.1 4.4E+02 0.0096 27.3 8.4 92 74-169 29-122 (400)
14 PRK07756 NADH dehydrogenase su 20.5 2.2E+02 0.0047 24.5 5.1 13 155-167 104-116 (122)
No 1
>KOG2592 consensus Tumor differentially expressed (TDE) protein [Function unknown]
Probab=100.00 E-value=4.6e-126 Score=933.09 Aligned_cols=388 Identities=40% Similarity=0.748 Sum_probs=347.9
Q ss_pred CccchhchhhhhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhhhhhCCCcccCCCCCccccccccchhhh
Q 039061 1 MSCLASCCASLTCGLCSSVASGISKKSARLAYCGLFGLSLIVSWILREVGTPLLEKFPWINTSDGDTRTKEWYQIQAVLR 80 (399)
Q Consensus 1 ~~~~~cc~g~a~c~~c~~~~~~~~s~~tR~~Y~~~~ll~~i~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~c~G~~aVyR 80 (399)
+++++||||+++|-+|+|||+.+||+++|++|+++++++++++|||+-..++.++|.||+++. .+|+.++|+.||||
T Consensus 4 ~s~~~cc~g~~acl~cs~cps~~nst~tRl~ya~~l~l~~~vs~i~~~~~~~~l~k~p~~c~~---~~c~~~~gy~AVyR 80 (426)
T KOG2592|consen 4 ASSVACCCGGAACLLCSCCPSLTNSTVTRLIYAFILLLGTLVSWIMLPGAEKQLNKLPWFCEG---NDCGKLLGYKAVYR 80 (426)
T ss_pred HHHHHHhhcchHHHHHhhCCCCCchhHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhCCccccC---CCcccchhhhHHHH
Confidence 468999999999988889999999999999999999999999999997556667799998753 27888999999999
Q ss_pred hhhhHHHHHHHHHHHHhhcccCCCccchhcccchHHHHHHHHHHHhheeeecccchh-hHHHHHHHhhHHHHHHHHHHHH
Q 039061 81 VSLGNFLFFGILSLIMIGIKDQNDKRDSWHHGGWCAKIIIWALLVVLMFFLPNVVIS-IYETISKFGAGLFLLVQVIILL 159 (399)
Q Consensus 81 vsfal~~Ff~l~~l~~i~v~~s~d~Ra~i~nG~W~~K~l~~~~l~i~~FfIP~~~f~-~y~~i~~~ga~~FiliQlIllv 159 (399)
+|||+++||++++|+|+|||++||||++||||||++|+++|+++++++|||||++|. .|+|++++||++|||+||||||
T Consensus 81 ~~f~~a~Ff~~lsllm~gVkss~D~R~~iqng~W~fK~i~~~~l~i~~FfIP~~~~~~~~~~v~~~Ga~~FILvqLvLLv 160 (426)
T KOG2592|consen 81 LCFGLACFFLLLSLLMIGVKSSKDPRAAIQNGFWFFKFILWFGLIVGSFFIPNGFFISFWFYVSVFGAALFILVQLVLLV 160 (426)
T ss_pred HHHHHHHHHHHHHHHHHhcCcCCCHHHHHHcCcHHHHHHHHHHHHHheEEcCCccchhHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998886 9999999999999999999999
Q ss_pred HHHHHHHHHhhhcccc--ee---------------eeeehhhhhhcCCCCCCCchhHHHHHHHHHHHHHhhhhhcccccc
Q 039061 160 DGVHTWNDAWVAKDEQ--KC---------------IYFSGILFIWFNPSGHDCGLNVFFIVMTMILAFVFAVIALNPSVN 222 (399)
Q Consensus 160 DFa~~wne~wv~~~e~--~w---------------i~~~v~~y~~f~~~~~~C~lN~~fIt~nliL~vi~s~isl~p~vq 222 (399)
||||+|||+|++|+|+ .| ++++++||+||+++ +||++||+||++|+++|++++++|+||+||
T Consensus 161 DFaH~w~e~wv~~~Edsr~wy~~Ll~~T~~~Y~~s~~~~~l~fv~ft~~-~~C~~nk~fi~~nlilcv~~si~sv~P~VQ 239 (426)
T KOG2592|consen 161 DFAHSWNESWVEKVEDSRFWYAALLGVTLLMYLLSLVATVLLFVYFTPG-DGCGENKFFISVNLILCVAISILSVHPKVQ 239 (426)
T ss_pred HHHhhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHhheEecCC-CCCCcceEEEeechHHHHHHHHHhcChhhh
Confidence 9999999999999994 66 78889999999996 799999999999999999999999999999
Q ss_pred C-----CcccchhhhhhHhhhhhhhhccCCCCCCcCCCCCCCc------------ccchhhHHHHHHHHHHHHhhhhhcc
Q 039061 223 G-----SLLPASVISVYCAYVCYTALSSEPHDYVCNGLHNKSK------------AVTISTLVLGMLTTVLSVLYSALRA 285 (399)
Q Consensus 223 ~-----gLLqSs~v~~Y~~YLt~SAlss~P~~~~CNp~~~~~~------------~~~~~~~iig~~~~~~~i~ys~~r~ 285 (399)
| ||||||+|++|+||||||||+||| |++|||..++.+ ...+.+.++|+++++++++|++.|+
T Consensus 240 e~~P~SGLlQSsvIs~Y~~YLt~SAlss~P-e~~CNP~~~~~~~~t~~~~~~~~~~~~~~~~iiGli~~~lcilYsalR~ 318 (426)
T KOG2592|consen 240 EGQPRSGLLQSSVISLYTMYLTWSALSSEP-ENGCNPWLNSSKNVTITVGPGASVSTFDATNIIGLIFLLLCILYSALRA 318 (426)
T ss_pred cCCCCcccchhHHHHHHHHHHHHHHHhcCC-ccccChhhhcccccccccCcccccccccccchHHHHHHHHHHHHHHhhc
Confidence 6 999999999999999999999999 699999753221 1234577899999999999999999
Q ss_pred CCcccccCCCCCCCcccccccccCccccccccCcCCCCCCCcccchhhHHHHHHHHHHHHHHhhcCCCCCCCCCcccccC
Q 039061 286 GSSTTFLSPPSSPKSAGKKLLLEGEDVEEGTENKKDIEGRPVSYSYSFFHLIFALASMYSAMLLSGWTSSSESSDLIDVG 365 (399)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~d~e~~~v~Y~ysfFH~vf~LaSlY~~M~lTnW~~~~~~~~~~~~g 365 (399)
+++++......+.++ +...++ |+|++++.|||++||.|+|+|||++|+|||+|+||+||||++++++.+.++.+
T Consensus 319 ~s~~~l~k~~~~~~e---~~~l~~---~dG~~~~~d~Ek~GV~YsYsfFHfvf~LASlyvmmtLTnW~~~~~~~~~v~~~ 392 (426)
T KOG2592|consen 319 SSRTQLRKLTRSNEE---EPLLPD---EDGGGRANDNEKDGVTYSYSFFHFVFVLASLYVMMTLTNWYTPDEDIWFVKSS 392 (426)
T ss_pred ccccccccccccccc---ccCccC---CCCCcccccccCCCeeEeeeHHHHHHHHHHHHHHHHhccccCCCCceeEEecc
Confidence 998887443322111 101111 22333458999999999999999999999999999999999987777889999
Q ss_pred ceeeehhhhHHHHHHHHHHHHhhhcccCCCCCCC
Q 039061 366 WTSVWVRICSQWVTAGLYIWTLVAPLLFPDREFF 399 (399)
Q Consensus 366 w~s~WVKi~ssW~~~~LY~WtLvAP~i~pdRdF~ 399 (399)
|+++||||+|+|+|++||+||||||+++|||||-
T Consensus 393 w~~vWVKI~ssWic~~LY~WTlVAPli~p~Rdf~ 426 (426)
T KOG2592|consen 393 WASVWVKIVSSWICSGLYLWTLVAPLILPDRDFS 426 (426)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhhhccccccC
Confidence 9999999999999999999999999999999983
No 2
>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines. The function of these proteins is unknown. ; GO: 0016020 membrane
Probab=100.00 E-value=8.2e-121 Score=933.15 Aligned_cols=389 Identities=42% Similarity=0.759 Sum_probs=340.3
Q ss_pred hhchhhhhhcccC-CCCCC-CcchhHHHHHHHHHHHHHHHHHHHHH--hhhhhhhhCCCcccCCCCCccccccccchhhh
Q 039061 5 ASCCASLTCGLCS-SVASG-ISKKSARLAYCGLFGLSLIVSWILRE--VGTPLLEKFPWINTSDGDTRTKEWYQIQAVLR 80 (399)
Q Consensus 5 ~cc~g~a~c~~c~-~~~~~-~~s~~tR~~Y~~~~ll~~i~a~i~~~--~~~~~~~~~~~~~~~~~~~~~~~c~G~~aVyR 80 (399)
|||||+++|++|| |||++ ++|+++|++|+++|+++++++|+|++ +.+++.+++|++++ .+++.++|+|++||||
T Consensus 1 acCcgsaaCs~~c~~c~~~~~~s~~tR~~Ya~~~l~~~i~a~i~~~~~~~~~l~~~~~~~~~--~~C~~~~c~G~~aVyR 78 (429)
T PF03348_consen 1 ACCCGSAACSLCCSCCPSCFKSSTSTRIMYALIFLLGTILAWIMLSPGVESKLKKKIPWFCG--FDCPSDSCVGYSAVYR 78 (429)
T ss_pred CCchhHhHHHHHHhccCCcCcccHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccCC--CCcchHHhhhhHHHHH
Confidence 7999999997654 67787 99999999999999999999999998 77787777887762 1122478999999999
Q ss_pred hhhhHHHHHHHHHHHHhhcccCCCccchhcccchHHHHHHHHHHHhheeeecc-cchhhHHHHHHHhhHHHHHHHHHHHH
Q 039061 81 VSLGNFLFFGILSLIMIGIKDQNDKRDSWHHGGWCAKIIIWALLVVLMFFLPN-VVISIYETISKFGAGLFLLVQVIILL 159 (399)
Q Consensus 81 vsfal~~Ff~l~~l~~i~v~~s~d~Ra~i~nG~W~~K~l~~~~l~i~~FfIP~-~~f~~y~~i~~~ga~~FiliQlIllv 159 (399)
+|||+++||++|+++|+|||+++|+|+++|||||++|+++|+++++++||||| .++.+|+|+|++||++|||+|||+||
T Consensus 79 vsfal~~Ff~l~~l~~i~v~~~~d~Ra~ihng~W~~K~l~l~~l~v~~FfiP~~~f~~~~~~v~~~ga~~FiliQlIlLv 158 (429)
T PF03348_consen 79 VSFALALFFFLMALLTIGVKSSRDPRAAIHNGFWFLKFLLLIGLIVGAFFIPNGSFINVYMYVARVGAFIFILIQLILLV 158 (429)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCccHHHHHHHhhHHHHHHHHHHHHheeEEeCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 45569999999999999999999999
Q ss_pred HHHHHHHHHhhhcccc----ee---------------eeeehhhhhhcCCCCCCCchhHHHHHHHHHHHHHhhhhhcccc
Q 039061 160 DGVHTWNDAWVAKDEQ----KC---------------IYFSGILFIWFNPSGHDCGLNVFFIVMTMILAFVFAVIALNPS 220 (399)
Q Consensus 160 DFa~~wne~wv~~~e~----~w---------------i~~~v~~y~~f~~~~~~C~lN~~fIt~nliL~vi~s~isl~p~ 220 (399)
||||+|||+|++|+|| +| ++++++||+||+ + +||++|++||++|++||++++++|++||
T Consensus 159 DFah~wne~w~~~~e~~~s~~w~~~Li~~T~~~y~~si~~~v~~y~~f~-~-~~C~lN~~fIt~nliL~vi~s~lSv~p~ 236 (429)
T PF03348_consen 159 DFAHSWNESWVEKAEEGNSKRWYIALIGVTLLFYAASIAGIVLMYVFFT-P-SGCSLNKFFITFNLILCVIISVLSVLPK 236 (429)
T ss_pred HHHHHHHHHHHhccccccCceehhHHHHHHHHHHHHHHHHHHHHHHHhC-C-CCCchhHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999996 57 888999999999 5 5899999999999999999999999999
Q ss_pred ccC-----CcccchhhhhhHhhhhhhhhccCCCCCCcCCCCCCCcccchhhHHHHHHHHHHHHhhhhhccCCcccccCC-
Q 039061 221 VNG-----SLLPASVISVYCAYVCYTALSSEPHDYVCNGLHNKSKAVTISTLVLGMLTTVLSVLYSALRAGSSTTFLSP- 294 (399)
Q Consensus 221 vq~-----gLLqSs~v~~Y~~YLt~SAlss~P~~~~CNp~~~~~~~~~~~~~iig~~~~~~~i~ys~~r~~~~~~~~~~- 294 (399)
||| ||||||+|++|+||||||||+||| |++|||...++++.++.+.++|+++++++++|+++|++++++....
T Consensus 237 Vqe~~p~sgLLqssvv~~Y~~yL~~SAlss~P-~~~CNp~~~~~~~~~~~~~iig~i~~~~~v~yss~ra~~~s~~~~~~ 315 (429)
T PF03348_consen 237 VQEANPRSGLLQSSVVSLYTTYLTWSALSSEP-DKECNPSGSRSGSWNTWQSIIGLIFTFVSVLYSSFRASSSSQVGKLQ 315 (429)
T ss_pred hhhcCCCcccccHHHHHHHHHHHHHHHHHcCC-CcccCCcccccCCcchHHHHHHHHHHHHHHHHhccccccccchhhhh
Confidence 976 999999999999999999999999 6899997445667788899999999999999999999988874111
Q ss_pred -CCC-----CCcc--cccccccCcccccccc-Cc-CCCCCCCcccchhhHHHHHHHHHHHHHHhhcCCCCCCCCCccccc
Q 039061 295 -PSS-----PKSA--GKKLLLEGEDVEEGTE-NK-KDIEGRPVSYSYSFFHLIFALASMYSAMLLSGWTSSSESSDLIDV 364 (399)
Q Consensus 295 -~~~-----~~~~--~~~~~~~~~~~~e~~~-~~-~d~e~~~v~Y~ysfFH~vf~LaSlY~~M~lTnW~~~~~~~~~~~~ 364 (399)
..+ .+.. +.+.+.+++|+||+++ ++ +|||+++++|||+|||++|+|||||+||+||||++++++.+.+++
T Consensus 316 l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~e~~~~~y~y~~FH~vf~las~Y~am~lTnW~~~~~~~~~~~~ 395 (429)
T PF03348_consen 316 LSSDSEGEQPKCCFNEDRDQADRADVEEGSLPQSVIDDEEDGVSYSYSFFHFVFALASMYVAMLLTNWYSPDADFETVGS 395 (429)
T ss_pred ccCccccccCccccccccccccccchhccccCcccccccccCCcccHHHHHHHHHHHHHHHHHHhccccCCccccccccC
Confidence 111 0000 0011122223333332 22 688999999999999999999999999999999997555668999
Q ss_pred CceeeehhhhHHHHHHHHHHHHhhhcccCCCCCC
Q 039061 365 GWTSVWVRICSQWVTAGLYIWTLVAPLLFPDREF 398 (399)
Q Consensus 365 gw~s~WVKi~ssW~~~~LY~WtLvAP~i~pdRdF 398 (399)
||+++||||+|+|+|++||+||||||+++|||||
T Consensus 396 ~~~~~Wvki~s~W~~~~LY~WtLvAP~~~p~RdF 429 (429)
T PF03348_consen 396 GWASVWVKIASSWVCLLLYIWTLVAPLLFPDRDF 429 (429)
T ss_pred CcceehHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999999999999999999999999999999998
No 3
>PF08426 ICE2: ICE2; InterPro: IPR013635 ICE2 is a fungal ER protein which has been shown to play an important role in forming/maintaining the cortical ER []. It has also been identified as a protein which is necessary for nuclear inner membrane targeting [].
Probab=61.39 E-value=1.3e+02 Score=31.48 Aligned_cols=159 Identities=14% Similarity=0.285 Sum_probs=99.7
Q ss_pred hhhhhhHHHHHHHHHHHHhhcccCCCccchhcccchHHHHHHHHHHHhh--eeeeccc------------------chhh
Q 039061 79 LRVSLGNFLFFGILSLIMIGIKDQNDKRDSWHHGGWCAKIIIWALLVVL--MFFLPNV------------------VISI 138 (399)
Q Consensus 79 yRvsfal~~Ff~l~~l~~i~v~~s~d~Ra~i~nG~W~~K~l~~~~l~i~--~FfIP~~------------------~f~~ 138 (399)
.-.|+.++.||++.+.+-+-.++++ +..+-.=.-...-++...+.+. ..|-.|. ..+.
T Consensus 30 LafSltL~~~Yf~~stl~l~t~~~~--~~~~~s~l~~~Q~~iipsLL~~~L~~fs~~~~~~~~~~~~~~~~~~~~~~v~~ 107 (412)
T PF08426_consen 30 LAFSLTLFLFYFILSTLRLATRRTS--YFRLSSILYYSQHLIIPSLLIWFLSRFSVDALNTLNSSSWALWYFYYNGLVEP 107 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcc--HHHHHHHHHHHHHHHHHHHHHHHhhccCCCcccccccccchhhhhhhhchHHH
Confidence 3578889999999888777766555 2221111111222333333332 2333222 2236
Q ss_pred HHHHHHHhhHHHHHHHH---HHHHHHHHHHHHHhhhcc--ccee---------eeeehhhhhh---cCCCCCCCchhHHH
Q 039061 139 YETISKFGAGLFLLVQV---IILLDGVHTWNDAWVAKD--EQKC---------IYFSGILFIW---FNPSGHDCGLNVFF 201 (399)
Q Consensus 139 y~~i~~~ga~~FiliQl---IllvDFa~~wne~wv~~~--e~~w---------i~~~v~~y~~---f~~~~~~C~lN~~f 201 (399)
|..+=+.-+-+|.+.+- +|+|.=+=+-++ |+.+. .+.| .+.+.-+|.. |.-+-+-=..+...
T Consensus 108 W~~~L~~StP~F~llEGf~sLLvIQa~Gq~~r-WLv~~~rSd~W~I~~Li~Sg~vit~s~YfLyRIy~fp~~is~~~AtL 186 (412)
T PF08426_consen 108 WDFLLRYSTPVFTLLEGFCSLLVIQAAGQTSR-WLVNRGRSDSWMIVSLIASGSVITASLYFLYRIYVFPWTISNLDATL 186 (412)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHHHHhHHHH-HHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHhhccccccCcccHHH
Confidence 66777777788988874 577888888876 66544 2378 1112223332 32220123578999
Q ss_pred HHHHHHHHHHhhhhhccccccCCcccchhhhhhHhhhhhh
Q 039061 202 IVMTMILAFVFAVIALNPSVNGSLLPASVISVYCAYVCYT 241 (399)
Q Consensus 202 It~nliL~vi~s~isl~p~vq~gLLqSs~v~~Y~~YLt~S 241 (399)
|++.+-..+.+++.-+..+ +++...||.+.+|++|=.|-
T Consensus 187 iG~~lT~~~~L~~~GI~sg-rGn~iESSLlFAYiV~cIY~ 225 (412)
T PF08426_consen 187 IGVTLTSVVFLGLYGIVSG-RGNVIESSLLFAYIVRCIYQ 225 (412)
T ss_pred HHHHHHHHHHHHHheeecC-CCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999998765 88999999999998876663
No 4
>PF11241 DUF3043: Protein of unknown function (DUF3043); InterPro: IPR021403 Some members in this family of proteins with unknown function are annotated as membrane proteins. This cannot be confirmed.
Probab=28.74 E-value=95 Score=28.66 Aligned_cols=56 Identities=20% Similarity=0.330 Sum_probs=30.4
Q ss_pred cccCCCccchhcccchHHHHHHHHHHHhheeeecccchhhHHHHHHHhhHHHHHHHHHHH
Q 039061 99 IKDQNDKRDSWHHGGWCAKIIIWALLVVLMFFLPNVVISIYETISKFGAGLFLLVQVIIL 158 (399)
Q Consensus 99 v~~s~d~Ra~i~nG~W~~K~l~~~~l~i~~FfIP~~~f~~y~~i~~~ga~~FiliQlIll 158 (399)
+++--|.|-.+-+=|.++-++++++.++ .|+..+..|.-+++.+-++.+++..++|
T Consensus 67 vRD~VDsR~~i~e~fmP~alv~lv~~~v----~~~~~~~~~~~~~~~~~~~~~iid~~~l 122 (170)
T PF11241_consen 67 VRDYVDSRRNIGEFFMPVALVLLVLSFV----VPSPQVQLYVTLAMYVLLLLVIIDGVIL 122 (170)
T ss_pred hhhhhhcccchHHHHHHHHHHHHHHHHH----cccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444565655555555555555554444 5665555666666555555555555544
No 5
>PF14007 YtpI: YtpI-like protein
Probab=27.33 E-value=70 Score=26.38 Aligned_cols=52 Identities=17% Similarity=0.277 Sum_probs=39.6
Q ss_pred hcccchHHHHHHHHHHHhheeeecccchhhHHHHHHHhhHHHHHHHHHHHHHH
Q 039061 109 WHHGGWCAKIIIWALLVVLMFFLPNVVISIYETISKFGAGLFLLVQVIILLDG 161 (399)
Q Consensus 109 i~nG~W~~K~l~~~~l~i~~FfIP~~~f~~y~~i~~~ga~~FiliQlIllvDF 161 (399)
...+|.--|--+.+|+++..|=+-.-++ .-..+..+-+.+|+++++.-++--
T Consensus 26 ~~k~~~~aka~ialG~fl~~fgiNQ~~~-~~st~~~iV~~ifl~lG~~n~~~G 77 (89)
T PF14007_consen 26 MEKKWYSAKANIALGIFLILFGINQMFL-FGSTVRLIVGAIFLVLGLFNLFAG 77 (89)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHhHHHHHHH
Confidence 4557888999999999998875544433 444788889999999999777643
No 6
>PRK10263 DNA translocase FtsK; Provisional
Probab=26.67 E-value=7.2e+02 Score=30.27 Aligned_cols=28 Identities=7% Similarity=-0.049 Sum_probs=15.5
Q ss_pred cccccchh-----hhhhhhHHHHHHHHHHHHhh
Q 039061 71 EWYQIQAV-----LRVSLGNFLFFGILSLIMIG 98 (399)
Q Consensus 71 ~c~G~~aV-----yRvsfal~~Ff~l~~l~~i~ 98 (399)
+..|..+- .+..||.+.|.+.+.++..+
T Consensus 62 Nl~GiVGA~LAD~L~~LFGl~AYLLP~LL~~~a 94 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGC 94 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34455544 36678877776654443333
No 7
>PF14163 SieB: Superinfection exclusion protein B
Probab=23.58 E-value=1.2e+02 Score=26.69 Aligned_cols=33 Identities=12% Similarity=0.165 Sum_probs=23.2
Q ss_pred hHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 039061 138 IYETISKFGAGLFLLVQVIILLDGVHTWNDAWVAK 172 (399)
Q Consensus 138 ~y~~i~~~ga~~FiliQlIllvDFa~~wne~wv~~ 172 (399)
.|.+++.+.|..|++.|.+..+ .+...+++.+|
T Consensus 34 ~~i~~~fl~s~s~li~~~~~~~--~~~~~~~~~~k 66 (151)
T PF14163_consen 34 PWIGLIFLFSVSYLIAQLLSFI--YKEAKDRYQRK 66 (151)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 5778888888899998887766 44444555543
No 8
>MTH00136 ND3 NADH dehydrogenase subunit 3; Provisional
Probab=23.34 E-value=1.7e+02 Score=24.88 Aligned_cols=14 Identities=14% Similarity=0.489 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 039061 155 VIILLDGVHTWNDA 168 (399)
Q Consensus 155 lIllvDFa~~wne~ 168 (399)
+++++-+.|+|++.
T Consensus 97 ~iL~~gl~yew~~G 110 (116)
T MTH00136 97 ILLTLGLIYEWLQG 110 (116)
T ss_pred HHHHHHHHHHHHcC
Confidence 78899999999864
No 9
>PF13334 DUF4094: Domain of unknown function (DUF4094)
Probab=23.33 E-value=79 Score=26.27 Aligned_cols=20 Identities=35% Similarity=0.795 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHhhcC--CCCC
Q 039061 336 LIFALASMYSAMLLSG--WTSS 355 (399)
Q Consensus 336 ~vf~LaSlY~~M~lTn--W~~~ 355 (399)
++++++|+.+.|++|| |..|
T Consensus 6 l~Lc~~SF~~G~lft~R~W~~p 27 (95)
T PF13334_consen 6 LLLCIASFCAGMLFTNRMWTVP 27 (95)
T ss_pred HHHHHHHHHHHHHHhcccccCC
Confidence 6899999999999999 8543
No 10
>MTH00042 ND3 NADH dehydrogenase subunit 3; Validated
Probab=23.05 E-value=1.7e+02 Score=24.89 Aligned_cols=14 Identities=21% Similarity=0.546 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHH
Q 039061 155 VIILLDGVHTWNDA 168 (399)
Q Consensus 155 lIllvDFa~~wne~ 168 (399)
+++++-+.|+|.+.
T Consensus 97 ~iL~~gl~yew~~G 110 (116)
T MTH00042 97 IILTIGLVYEWVNG 110 (116)
T ss_pred HHHHHHHHHHHHcC
Confidence 58889999999763
No 11
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=22.16 E-value=3.4e+02 Score=28.08 Aligned_cols=27 Identities=11% Similarity=0.139 Sum_probs=21.3
Q ss_pred hhHHHHHHHHHHHHHhhhhhccccccC
Q 039061 197 LNVFFIVMTMILAFVFAVIALNPSVNG 223 (399)
Q Consensus 197 lN~~fIt~nliL~vi~s~isl~p~vq~ 223 (399)
.-..+|..|.++.+-+-+-.+.-+.|+
T Consensus 108 fa~vMi~~nGilGl~ll~GGlr~~eQ~ 134 (366)
T PRK10599 108 YSIIMIVTGGLVGFSLLLGGRKFATQY 134 (366)
T ss_pred HHHHHHHhccHHHHHHHHhccccCeee
Confidence 456788999998888888888776666
No 12
>PRK06602 NADH:ubiquinone oxidoreductase subunit A; Validated
Probab=22.09 E-value=1.8e+02 Score=25.05 Aligned_cols=14 Identities=21% Similarity=0.586 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHH
Q 039061 155 VIILLDGVHTWNDA 168 (399)
Q Consensus 155 lIllvDFa~~wne~ 168 (399)
+++++-+.|+|++.
T Consensus 103 ~iL~~gl~yew~~G 116 (121)
T PRK06602 103 LVLLVGLVYLWRKG 116 (121)
T ss_pred HHHHHHHHHHHHcC
Confidence 57889999999863
No 13
>PRK15487 O-antigen ligase RfaL; Provisional
Probab=21.07 E-value=4.4e+02 Score=27.31 Aligned_cols=92 Identities=13% Similarity=0.119 Sum_probs=48.0
Q ss_pred ccchhhhhhhhHHHHHHHHHHHHhhcccCCCccchhcccchHHHHHHHHHHHhheeeecccchhhHHHH-HHHhh-HHHH
Q 039061 74 QIQAVLRVSLGNFLFFGILSLIMIGIKDQNDKRDSWHHGGWCAKIIIWALLVVLMFFLPNVVISIYETI-SKFGA-GLFL 151 (399)
Q Consensus 74 G~~aVyRvsfal~~Ff~l~~l~~i~v~~s~d~Ra~i~nG~W~~K~l~~~~l~i~~FfIP~~~f~~y~~i-~~~ga-~~Fi 151 (399)
|..+..-+.+.+++...+..+ .++.|.....+.+.++-...++.+.+.+...+-||.......+. ....+ .+|+
T Consensus 29 ~~t~~k~~~~~l~~~~~L~~l----~~d~k~~~~~l~~~l~i~~lll~ll~l~S~l~s~d~~~al~~l~n~ll~g~llf~ 104 (400)
T PRK15487 29 GITRYKHLIIILMTITAIYYL----SRDPKHFLSLFKNSLFYSVAVLSLALLYSILISPDMKLSFKEFNKTILEGFLLYT 104 (400)
T ss_pred chhHHHHHHHHHHHHHHHHHH----HcCHHHHHHHhcchHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHH
Confidence 444555666666665554333 13333333456666666666666666666666666433322222 22233 4677
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 039061 152 LVQVIILLDGVHTWNDAW 169 (399)
Q Consensus 152 liQlIllvDFa~~wne~w 169 (399)
.+|.+++-+--.+.--+|
T Consensus 105 ~l~~ill~~~~r~~~~k~ 122 (400)
T PRK15487 105 LLIPVLLKDETKETVAKI 122 (400)
T ss_pred HHHHHHHhHHHHHHHHHH
Confidence 777777666555544333
No 14
>PRK07756 NADH dehydrogenase subunit A; Validated
Probab=20.49 E-value=2.2e+02 Score=24.53 Aligned_cols=13 Identities=23% Similarity=0.621 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHH
Q 039061 155 VIILLDGVHTWND 167 (399)
Q Consensus 155 lIllvDFa~~wne 167 (399)
+++++-+.|+|++
T Consensus 104 ~iL~~gl~yew~~ 116 (122)
T PRK07756 104 VMLLVGLAYAWKK 116 (122)
T ss_pred HHHHHHHHHHHHc
Confidence 5788999999976
Done!