Query 039069
Match_columns 293
No_of_seqs 298 out of 1494
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 09:43:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039069.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039069hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t92_A Histone acetyltransfera 100.0 7.4E-32 2.5E-36 214.2 9.3 104 161-279 10-121 (121)
2 3p57_P Histone acetyltransfera 100.0 6.3E-29 2.2E-33 194.1 11.1 101 162-277 10-110 (112)
3 3hve_A Gigaxonin; ubiquitin, c 99.9 3.9E-25 1.3E-29 197.7 7.2 139 1-149 51-191 (256)
4 3i3n_A Kelch-like protein 11; 99.9 3.9E-25 1.3E-29 200.1 4.9 137 1-147 55-197 (279)
5 3htm_A Speckle-type POZ protei 99.9 8.6E-24 2.9E-28 177.4 9.1 119 1-122 54-172 (172)
6 3hqi_A Speckle-type POZ protei 99.9 2.1E-22 7.3E-27 184.7 10.6 119 1-122 194-312 (312)
7 4eoz_A Speckle-type POZ protei 99.8 1.4E-20 4.9E-25 153.3 1.7 101 1-104 45-145 (145)
8 2vkp_A BTB/POZ domain-containi 99.7 4.6E-17 1.6E-21 126.4 5.1 76 1-79 32-107 (109)
9 2if5_A Zinc finger and BTB dom 99.6 1.8E-16 6.3E-21 125.3 5.5 75 1-77 45-119 (120)
10 1r29_A B-cell lymphoma 6 prote 99.6 7.5E-16 2.6E-20 123.0 6.2 76 1-79 49-125 (127)
11 2z8h_A Transcription regulator 99.6 5.3E-16 1.8E-20 125.9 3.6 82 1-87 56-138 (138)
12 2ppi_A Gigaxonin; BTB domain, 99.6 6E-16 2.1E-20 126.7 3.6 76 1-78 67-144 (144)
13 3b84_A Zinc finger and BTB dom 99.5 1.3E-15 4.6E-20 120.4 3.1 73 1-79 44-116 (119)
14 2vpk_A Myoneurin; transcriptio 99.5 4.9E-15 1.7E-19 116.4 5.3 72 1-78 42-115 (116)
15 1buo_A POZ domain, protein (pr 99.5 6.1E-15 2.1E-19 116.9 5.3 72 1-79 48-119 (121)
16 2yy9_A Zinc finger and BTB dom 99.5 1.7E-15 5.9E-20 122.5 1.8 79 1-86 45-123 (135)
17 2q81_A MIZ-1 protein; BTB/POZ 99.5 1.3E-14 4.4E-19 114.7 2.5 71 1-78 47-117 (119)
18 3ohu_A Transcription regulator 99.5 3.1E-15 1.1E-19 119.1 -1.2 73 1-77 52-125 (125)
19 2ihc_A Transcription regulator 99.5 3.9E-15 1.3E-19 118.6 -1.2 74 1-78 49-123 (124)
20 3ga1_A Nucleus accumbens-assoc 99.4 8.2E-15 2.8E-19 117.4 -0.1 73 1-79 53-126 (129)
21 3m5b_A Zinc finger and BTB dom 99.3 2.9E-13 1E-17 107.2 2.2 68 1-79 50-117 (119)
22 3fkc_A Transcriptional regulat 99.3 1.7E-12 5.7E-17 102.2 5.9 64 1-71 51-115 (116)
23 2ast_A S-phase kinase-associat 99.3 1.5E-11 5.3E-16 102.1 8.7 100 1-102 20-149 (159)
24 4ajy_C Transcription elongatio 98.8 6.2E-09 2.1E-13 79.2 5.6 63 1-65 21-96 (97)
25 2eqx_A Kelch repeat and BTB do 98.8 4.3E-09 1.5E-13 81.2 4.6 83 81-174 7-97 (105)
26 2p1m_A SKP1-like protein 1A; F 98.7 4.1E-09 1.4E-13 87.5 2.7 96 1-100 23-146 (160)
27 1fs1_B SKP1, cyclin A/CDK2-ass 98.7 1.9E-08 6.3E-13 81.8 6.4 84 1-89 21-128 (141)
28 1l3e_B P300 protein; protein-p 98.7 1.4E-08 4.9E-13 77.3 4.0 84 164-257 16-99 (101)
29 3v7d_A Suppressor of kinetocho 98.0 2.8E-05 9.5E-10 64.9 9.2 98 1-99 26-153 (169)
30 1hv2_A Elongin C, ELC1; protei 97.8 1.8E-05 6E-10 60.2 5.1 65 1-66 23-99 (99)
31 2fnj_C Transcription elongatio 97.7 2E-05 6.8E-10 59.5 2.9 66 1-66 20-96 (96)
32 1vcb_B Protein (elongin C); tu 97.2 0.00026 9E-09 54.9 4.2 66 1-66 36-112 (112)
33 3drz_A BTB/POZ domain-containi 97.1 0.00086 3E-08 51.4 6.4 73 5-79 30-106 (107)
34 1l3e_B P300 protein; protein-p 95.0 0.049 1.7E-06 41.1 5.8 52 163-230 46-97 (101)
35 3drx_A BTB/POZ domain-containi 94.4 0.035 1.2E-06 47.2 4.2 72 6-79 37-112 (202)
36 2vkp_A BTB/POZ domain-containi 90.4 0.19 6.7E-06 37.3 3.3 32 82-113 77-108 (109)
37 3t92_A Histone acetyltransfera 89.9 0.38 1.3E-05 37.4 4.7 49 205-257 17-67 (121)
38 2eqx_A Kelch repeat and BTB do 87.5 1.1 3.7E-05 33.5 5.7 30 51-80 10-39 (105)
39 1r29_A B-cell lymphoma 6 prote 84.8 0.81 2.8E-05 34.9 3.8 32 82-113 95-126 (127)
40 2yy9_A Zinc finger and BTB dom 83.5 0.41 1.4E-05 37.3 1.6 35 82-116 87-121 (135)
41 3b84_A Zinc finger and BTB dom 81.5 0.71 2.4E-05 35.0 2.2 32 82-113 86-117 (119)
42 2q81_A MIZ-1 protein; BTB/POZ 81.4 1.3 4.5E-05 33.4 3.8 30 82-111 88-117 (119)
43 1buo_A POZ domain, protein (pr 80.4 1.6 5.4E-05 33.0 3.9 32 82-113 89-120 (121)
44 2vpk_A Myoneurin; transcriptio 80.0 1.6 5.4E-05 32.7 3.8 30 82-111 86-115 (116)
45 2z8h_A Transcription regulator 79.6 0.46 1.6E-05 37.1 0.6 34 82-115 101-134 (138)
46 2if5_A Zinc finger and BTB dom 78.8 2 6.8E-05 32.3 4.0 29 82-110 91-119 (120)
47 3p57_P Histone acetyltransfera 76.2 2 7E-05 32.8 3.3 46 206-255 17-64 (112)
48 1s1g_A Potassium voltage-gated 72.6 2.8 9.5E-05 32.5 3.3 57 20-78 52-110 (124)
49 2ppi_A Gigaxonin; BTB domain, 70.2 1.9 6.6E-05 33.8 2.0 29 82-110 115-143 (144)
50 3htm_A Speckle-type POZ protei 69.6 4.1 0.00014 32.3 3.9 33 82-114 100-132 (172)
51 4eoz_A Speckle-type POZ protei 68.8 2 7E-05 33.1 1.8 34 82-115 91-124 (145)
52 3m5b_A Zinc finger and BTB dom 67.1 3.4 0.00012 31.3 2.7 31 82-112 87-117 (119)
53 1t1d_A Protein (potassium chan 65.4 4.4 0.00015 30.1 3.0 48 20-69 41-89 (100)
54 2nz0_B Potassium voltage-gated 62.6 3.8 0.00013 32.5 2.3 48 20-69 74-121 (140)
55 3ga1_A Nucleus accumbens-assoc 62.6 1.1 3.9E-05 34.3 -0.8 32 82-113 96-127 (129)
56 3hve_A Gigaxonin; ubiquitin, c 61.0 9.6 0.00033 32.5 4.8 33 82-114 99-131 (256)
57 3kvt_A Potassium channel prote 59.7 1.3 4.6E-05 33.8 -0.9 58 20-79 45-104 (115)
58 3hqi_A Speckle-type POZ protei 57.1 7.1 0.00024 34.4 3.3 42 72-113 228-271 (312)
59 1nn7_A Potassium channel KV4.2 57.0 2.4 8.2E-05 31.8 0.2 48 20-69 39-86 (105)
60 3i3n_A Kelch-like protein 11; 54.2 6 0.0002 34.3 2.3 40 74-113 97-138 (279)
61 4g9q_A 4-carboxymuconolactone 43.7 1.2E+02 0.004 26.5 8.9 97 6-103 19-127 (269)
62 2ihc_A Transcription regulator 41.6 1.2 4.2E-05 33.9 -3.8 30 82-111 94-123 (124)
63 2ast_A S-phase kinase-associat 40.1 29 0.00098 27.5 4.1 34 82-115 94-127 (159)
64 3ohu_A Transcription regulator 30.9 1.6 5.6E-05 33.1 -4.7 28 82-109 97-124 (125)
65 3ip4_B Aspartyl/glutamyl-tRNA( 25.7 2E+02 0.0067 27.3 7.8 71 28-118 364-434 (483)
66 1fs1_B SKP1, cyclin A/CDK2-ass 24.7 67 0.0023 24.8 3.8 34 82-115 89-122 (141)
No 1
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A
Probab=99.97 E-value=7.4e-32 Score=214.25 Aligned_cols=104 Identities=33% Similarity=0.756 Sum_probs=94.6
Q ss_pred HHhHHHHHHHHHHHhhcCCcccCCCcccccCCCCCCCccchhhHHHHHHHHhhccccCCCCCcchHHHHHHHHHHHhcCC
Q 039069 161 YLQLHEAMEALLHICRDGCRTIGPRDKVLKGSQVACNFPACKGLEALVRHFSNCKTRVPGGCVHCKRMWQLLELHSRMCN 240 (293)
Q Consensus 161 y~~L~~~m~lL~h~~~~~c~~~~~~~~~~~~~~~~c~~~~c~~~~~l~~h~~~c~~r~~~gC~~C~~~~~l~~~ha~~c~ 240 (293)
..+|+++|++|+|++. |++ +.|.+|+|.+||.|++|+.+|+.|.+|||++|++||+||.+|+++|+
T Consensus 10 ~~~iq~~l~~L~HA~~--C~~------------~~C~~p~C~~mK~ll~H~~~C~~r~~~~c~~C~~~~~Ll~~Hak~C~ 75 (121)
T 3t92_A 10 RLSIQRAIQSLVHAAQ--CRN------------ANCSLPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALAAYHAKHCQ 75 (121)
T ss_dssp HHHHHHHHHHHHHHHH--CCC------------TTCCCHHHHHHHHHHHHHHHCSSTTTTTCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcc--CcC------------CCCCCchhHHHHHHHHHHHHccCCCCCCCCchHHHHHHHHHHHHhCC
Confidence 4578999999999988 986 68999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHHHhc--------hhhHHHHHHHHHHHHHhh
Q 039069 241 EPDLCKVPLCRHFKEKMQQQS--------KKDEAKWKLLVSKVISAK 279 (293)
Q Consensus 241 ~~~~c~vp~c~~~k~~~~~~~--------~~~~~~~~~~~~~~~~~~ 279 (293)
+++ |+||+|++||++|++++ +++|++|+|||+||++||
T Consensus 76 ~~~-C~VP~C~~iK~~~~~qq~q~~~~~~~~~~~~~~~l~~~~~~~~ 121 (121)
T 3t92_A 76 ENK-CPVPFCLNIKQKLRQQQLEASIDLSAYIESGEEQLLSDLFAVK 121 (121)
T ss_dssp CTT-CCSTTHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHTC--
T ss_pred CCC-CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 975 99999999999999874 458999999999999886
No 2
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A
Probab=99.96 E-value=6.3e-29 Score=194.14 Aligned_cols=101 Identities=30% Similarity=0.782 Sum_probs=83.6
Q ss_pred HhHHHHHHHHHHHhhcCCcccCCCcccccCCCCCCCccchhhHHHHHHHHhhccccCCCCCcchHHHHHHHHHHHhcCCC
Q 039069 162 LQLHEAMEALLHICRDGCRTIGPRDKVLKGSQVACNFPACKGLEALVRHFSNCKTRVPGGCVHCKRMWQLLELHSRMCNE 241 (293)
Q Consensus 162 ~~L~~~m~lL~h~~~~~c~~~~~~~~~~~~~~~~c~~~~c~~~~~l~~h~~~c~~r~~~gC~~C~~~~~l~~~ha~~c~~ 241 (293)
..|+..+++|+|++. |++ ++|.+++|.+||.||+|+++|+.|++|||++|++||+|+++||++|++
T Consensus 10 ~~iq~~l~~L~HA~~--C~~------------~~C~~~~C~~mK~ll~H~~~C~~r~~~gC~~Ck~~~~Ll~~HAk~C~~ 75 (112)
T 3p57_P 10 LSIQRCIQSLVHACQ--CRN------------ANCSLPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALCCYHAKHCQE 75 (112)
T ss_dssp HHHHHHHHHHHHHHH--CCC------------TTCCCTTHHHHHHHHTCTTCC-------CCCHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHHcc--CCC------------CCCCChhhHHHHHHHHHHHHccCCCCCCCcccHHHHHHHHHHHHHcCC
Confidence 468999999999988 997 799999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhchhhHHHHHHHHHHHHH
Q 039069 242 PDLCKVPLCRHFKEKMQQQSKKDEAKWKLLVSKVIS 277 (293)
Q Consensus 242 ~~~c~vp~c~~~k~~~~~~~~~~~~~~~~~~~~~~~ 277 (293)
+ +|+||+|++||++|++++.+.......+.++.|+
T Consensus 76 ~-~C~VP~C~~iK~~~~q~q~q~r~~~~~~~rrr~a 110 (112)
T 3p57_P 76 N-KCPVPFCLNIKQKLRQQQLQHRLQQAQMLRRRMA 110 (112)
T ss_dssp T-TCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5 6999999999999999877765555555555554
No 3
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=99.91 E-value=3.9e-25 Score=197.72 Aligned_cols=139 Identities=17% Similarity=0.289 Sum_probs=117.8
Q ss_pred CCCCHHHHHHhcCCCC--cCCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHH
Q 039069 1 SIASPVLGNILQQSKV--KNGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLE 78 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~--E~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~ 78 (293)
|++||||++||.+++. |+...+|.|+|+++++|+.+|+|+|||.+..+ .+++.+++.+|++|+++.|++.|+++|.
T Consensus 51 aa~S~yF~~mf~~~~~~~e~~~~~i~l~~v~~~~f~~ll~~~Yt~~~~i~--~~~v~~ll~~A~~l~i~~l~~~c~~~L~ 128 (256)
T 3hve_A 51 AAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLN--EDTIQDVVQAADLLLLTDLKTLCCEFLE 128 (256)
T ss_dssp HTTCHHHHHTC-----------CEEECSSCCHHHHHHHHHHHHHSCCCCC---CCHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHcCHHHHHHhCCCCCcccCCCCeEEeCCCCHHHHHHHHhhccCCCCccc--HhHHHHHHHHHHHHChHHHHHHHHHHHH
Confidence 5799999999999887 66778999999999999999999999999766 6789999999999999999999999999
Q ss_pred hcCCChHhHHHHHHHhhhCChHHHHHHHHHHHHHhHHHHhcccccchhhhcChHHHHHHHHHhhchHHHHH
Q 039069 79 QGGLTKENVIDVLQLARNCDAPRLSLICVRMVVKDFKAITSTEGWKIMKRANPALEQELVESVVDEDSRKQ 149 (293)
Q Consensus 79 ~~~l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~nf~~v~~se~f~~L~~~~p~l~~ell~~ll~~d~~~~ 149 (293)
. .++++||+.++.+|..|+++.|...|.+||.+||.++..+++|..| ..+.+..++.+|.+..
T Consensus 129 ~-~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L-------~~~~l~~lL~~d~L~v 191 (256)
T 3hve_A 129 G-CIAAENCIGIRDFALHYCLHHVHYLATEYLETHFRDVSSTEEFLEL-------SPQKLKEVISLEKLNV 191 (256)
T ss_dssp H-TCCSSTTHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTTCHHHHSS-------CHHHHHHHHHCC----
T ss_pred h-hCCHhhHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhCCcchhcC-------CHHHHHHHHccCCCCC
Confidence 9 6999999999999999999999999999999999999999999985 5677777887777764
No 4
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.90 E-value=3.9e-25 Score=200.15 Aligned_cols=137 Identities=18% Similarity=0.306 Sum_probs=118.0
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcC------CCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHH
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIP------GVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCE 74 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~------~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~ 74 (293)
|++||||++||+++|.|+...+|+|+ ++++++|+.+|+|+|||.+..+ .+++.+++.+|++|+++.|++.|+
T Consensus 55 aa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~--~~~v~~ll~~A~~l~i~~L~~~c~ 132 (279)
T 3i3n_A 55 AAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVS--TGSVHEVLELADRFLLIRLKEFCG 132 (279)
T ss_dssp HHHCTTSGGGCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEE--TTTHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHcCHHHHHHhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccC--HHHHHHHHHHHHHHCcHHHHHHHH
Confidence 47899999999999999999999998 9999999999999999999665 678999999999999999999999
Q ss_pred HHHHhcCCChHhHHHHHHHhhhCChHHHHHHHHHHHHHhHHHHhcccccchhhhcChHHHHHHHHHhhchHHH
Q 039069 75 YFLEQGGLTKENVIDVLQLARNCDAPRLSLICVRMVVKDFKAITSTEGWKIMKRANPALEQELVESVVDEDSR 147 (293)
Q Consensus 75 ~~L~~~~l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~nf~~v~~se~f~~L~~~~p~l~~ell~~ll~~d~~ 147 (293)
++|.+ .++++||+.++.+|..|+++.|...|..||..||.++..+++|..| ..+.+..++.+|.+
T Consensus 133 ~~L~~-~l~~~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L-------~~~~l~~lL~~d~L 197 (279)
T 3i3n_A 133 EFLKK-KLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTL-------PFHLIRDWLSDLEI 197 (279)
T ss_dssp HHHHH-HCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGGS-------CHHHHHHHHTCSSC
T ss_pred HHHHH-cCCcchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhcC-------CHHHHHHHhcCcCC
Confidence 99999 6999999999999999999999999999999999999999999986 45566666665544
No 5
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.89 E-value=8.6e-24 Score=177.39 Aligned_cols=119 Identities=24% Similarity=0.320 Sum_probs=106.3
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHHhc
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLEQG 80 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~~ 80 (293)
|++||||++||.+++.|+...+|.|+++++++|+.+|+|+|||.++.+ .+++.+++.+|++|+++.|++.|+++|..
T Consensus 54 ~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~l~~~Yt~~~~~~--~~~~~~ll~~A~~~~~~~l~~~c~~~l~~- 130 (172)
T 3htm_A 54 AARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNL--DKMADDLLAAADKYALERLKVMCEDALCS- 130 (172)
T ss_dssp HHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHHHHHHHHHSCCTTG--GGTHHHHHHHHHHTTCHHHHHHHHHHHHH-
T ss_pred HHcCHHHHHHHccCccccCCCeEEecCCCHHHHHHHHHHHhCCCCCCc--HHHHHHHHHHHHHhCcHHHHHHHHHHHHH-
Confidence 468999999999999999989999999999999999999999999655 67899999999999999999999999999
Q ss_pred CCChHhHHHHHHHhhhCChHHHHHHHHHHHHHhHHHHhcccc
Q 039069 81 GLTKENVIDVLQLARNCDAPRLSLICVRMVVKDFKAITSTEG 122 (293)
Q Consensus 81 ~l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~nf~~v~~se~ 122 (293)
.++++|++.++.+|..|+++.|...|.+||.+||.+|.++++
T Consensus 131 ~l~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~~ 172 (172)
T 3htm_A 131 NLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLETSG 172 (172)
T ss_dssp TCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC--------
T ss_pred hCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHcCCC
Confidence 699999999999999999999999999999999999988764
No 6
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.87 E-value=2.1e-22 Score=184.74 Aligned_cols=119 Identities=24% Similarity=0.320 Sum_probs=102.1
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHHhc
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLEQG 80 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~~ 80 (293)
|++||||++||.++|.|+...+|.|+|+++++|+.+|+|+|||.++.. .+++.+||.+|++|+++.|+..|+++|..
T Consensus 194 aa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~~iYt~~~~~~--~~~~~~ll~~A~~~~~~~l~~~c~~~l~~- 270 (312)
T 3hqi_A 194 AARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNL--DKMADDLLAAADKYALERLKVMCEDALCS- 270 (312)
T ss_dssp HHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHHHHHHSCCTTH--HHHHHHHHHHHHHTTCHHHHHHHHHHHHT-
T ss_pred HHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHHhhcCCCCCCh--HHHHHHHHHHHHHhCHHHHHHHHHHHHHc-
Confidence 578999999999999999999999999999999999999999998655 68999999999999999999999999999
Q ss_pred CCChHhHHHHHHHhhhCChHHHHHHHHHHHHHhHHHHhcccc
Q 039069 81 GLTKENVIDVLQLARNCDAPRLSLICVRMVVKDFKAITSTEG 122 (293)
Q Consensus 81 ~l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~nf~~v~~se~ 122 (293)
.++.+|++.++.+|..|+++.|+..|.+||..||.+|.+++|
T Consensus 271 ~~~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~~~~~v~~s~g 312 (312)
T 3hqi_A 271 NLSVENAAEILILADLHSADQLKTQAVDFINYHATDVLETSG 312 (312)
T ss_dssp TCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTC--------
T ss_pred cCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 699999999999999999999999999999999999988765
No 7
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.79 E-value=1.4e-20 Score=153.34 Aligned_cols=101 Identities=25% Similarity=0.339 Sum_probs=69.5
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHHhc
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLEQG 80 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~~ 80 (293)
|++||||++||.+++.|+...+|.|+++++++|+.+|+|+|||.++.+ .+++.+++.+|++|+++.|++.|+++|.+
T Consensus 45 ~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l~~~Y~~~~~~~--~~~~~~ll~~A~~~~~~~l~~~c~~~l~~- 121 (145)
T 4eoz_A 45 AARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYTGKAPNL--DKMADDLLAAADKYALERLKVMCEDALCS- 121 (145)
T ss_dssp HHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHHHHHHHSCCTTG--GGTHHHHHHHHHHTTCHHHHHHHHCC----
T ss_pred HHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHHHhhccCccCCc--HHHHHHHHHHHHHhCHHHHHHHHHHHHHH-
Confidence 468999999999999998888999999999999999999999999655 67899999999999999999999999999
Q ss_pred CCChHhHHHHHHHhhhCChHHHHH
Q 039069 81 GLTKENVIDVLQLARNCDAPRLSL 104 (293)
Q Consensus 81 ~l~~~Nvv~il~lA~~~~~~~L~~ 104 (293)
.++++||+.++.+|..|++++|++
T Consensus 122 ~l~~~n~~~~l~~A~~~~~~~Lk~ 145 (145)
T 4eoz_A 122 NLSVENAAEILILADLHSADQLKT 145 (145)
T ss_dssp ------------------------
T ss_pred hCCHHHHHHHHHHHHHhCHHHhcC
Confidence 699999999999999999999864
No 8
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.66 E-value=4.6e-17 Score=126.43 Aligned_cols=76 Identities=28% Similarity=0.475 Sum_probs=65.9
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHHh
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLEQ 79 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~ 79 (293)
|++||||++||.++|.|+. .+|.|+++++++|+.+|+|+|||.++.+ .+++.+++.+|++|+++.|++.|+++|.+
T Consensus 32 a~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~--~~~~~~ll~~A~~~~~~~L~~~c~~~l~~ 107 (109)
T 2vkp_A 32 AVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLE--ADTVLATLYAAKKYIVPALAKACVNFLET 107 (109)
T ss_dssp HHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCC--TTTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCC--HHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 4789999999999999988 8999999999999999999999999766 57899999999999999999999999987
No 9
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.63 E-value=1.8e-16 Score=125.28 Aligned_cols=75 Identities=20% Similarity=0.297 Sum_probs=66.0
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHH
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFL 77 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L 77 (293)
|++||||++||.++|.|+...+|.|+++++++|+.+|+|+|||.+..+ .+++.+++.+|++|+++.|++.|+++|
T Consensus 45 aa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ll~~~Yt~~~~~~--~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 45 AACSQYFKKLFTSGAVVDQQNVYEIDFVSAEALTALMDFAYTATLTVS--TANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp HHHCHHHHHHHHC-----CCSEEECCSSCHHHHHHHHHHHHHSCCCCC--GGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHhCHHHHHHhcCCccccCCceEEeCCCCHHHHHHHHHHHcCCCCccC--HHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 478999999999999999989999999999999999999999999766 678999999999999999999999987
No 10
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.60 E-value=7.5e-16 Score=123.03 Aligned_cols=76 Identities=13% Similarity=0.308 Sum_probs=71.0
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEc-CCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHHh
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKI-PGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLEQ 79 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L-~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~ 79 (293)
|++||||++||.+++.| ...+|.| +++++++|+.+|+|+|||.+..+ .+++.+|+.+|++|+++.|++.|+++|.+
T Consensus 49 aa~S~~F~~~f~~~~~e-~~~~i~l~~~~~~~~f~~ll~~~Ytg~~~~~--~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 49 MACSGLFYSIFTDQLKR-NLSVINLDPEINPEGFNILLDFMYTSRLNLR--EGNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp HHHCHHHHHHHTSTTTT-TCSEEECCTTSCHHHHHHHHHHHHHSCCCCC--TTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHhCHHHHHHhcCCccC-CCCEEEeCCCCCHHHHHHHHHHHcCCCcCcC--HHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 57899999999999998 6788999 99999999999999999999766 67899999999999999999999999986
No 11
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.58 E-value=5.3e-16 Score=125.92 Aligned_cols=82 Identities=13% Similarity=0.147 Sum_probs=74.0
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcC-CCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHHh
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIP-GVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLEQ 79 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~-~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~ 79 (293)
|++||||++||.+++.|. ..|.++ ++++++|+.+|+|+|||.+..+ .+++.+|+.+|++|+++.|++.|+++|..
T Consensus 56 aa~S~yF~~~f~~~~~e~--~~i~l~~~v~~~~~~~lL~~~Ytg~~~i~--~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 131 (138)
T 2z8h_A 56 AACSSYFHSRIVGQTDAE--LTVTLPEEVTVKGFEPLIQFAYTAKLILS--KDNVDEVCRCVEFLSVHNIEESCFQFLKF 131 (138)
T ss_dssp HHHCHHHHHHHTTCCCTT--EEEECCTTSCHHHHHHHHHHHHHSCCCCC--TTTHHHHHHHHHHHTCGGGHHHHHHHTTC
T ss_pred HHcCHHHHHHHhcCCCCC--ceEEeCCCCCHHHHHHHHHHhcCCCcccC--HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 578999999999998764 478995 9999999999999999999766 67899999999999999999999999999
Q ss_pred cCCChHhH
Q 039069 80 GGLTKENV 87 (293)
Q Consensus 80 ~~l~~~Nv 87 (293)
.++.+|+
T Consensus 132 -~l~~sna 138 (138)
T 2z8h_A 132 -KFLDSTS 138 (138)
T ss_dssp -CCSCCCC
T ss_pred -hcccccC
Confidence 6998773
No 12
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.58 E-value=6e-16 Score=126.72 Aligned_cols=76 Identities=20% Similarity=0.333 Sum_probs=66.7
Q ss_pred CCCCHHHHHHhcCCCCc--CCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHH
Q 039069 1 SIASPVLGNILQQSKVK--NGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLE 78 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E--~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~ 78 (293)
|++||||++||.+++.| +...+|.|+|+++++|+.+|+|+|||.+..+ .+++.+|+.+|++|+++.|++.|+++|+
T Consensus 67 aa~S~yF~~mf~~~~~e~e~~~~~I~l~~v~~~~f~~lL~fiYtg~~~i~--~~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 67 AAASPYIRTKLNYNPPKDDGSTYKIELEGISVMVMREILDYIFSGQIRLN--EDTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp HHHCHHHHHHHHHCC-----CCCEEECCSSCHHHHHHHHHHHTTSCCCCC--TTTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred HHcCHHHHHHHcCCCccccCCCcEEEeCCCCHHHHHHHHHHHhCCCCCCC--HHHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 57899999999988865 5677899999999999999999999999766 6789999999999999999999998863
No 13
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.55 E-value=1.3e-15 Score=120.40 Aligned_cols=73 Identities=14% Similarity=0.208 Sum_probs=65.4
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHHh
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLEQ 79 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~ 79 (293)
|++||||++||.+++ ..+|.|+|+++++|+.+|+|+|||.++.+ .+++.+++.+|++|+++.|++.|+++|.+
T Consensus 44 aa~S~yF~~~f~~~~----~~~i~l~~~~~~~f~~ll~~iYtg~~~~~--~~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 44 ACCSHFFQSLYGDGS----GGSVVLPAGFAEIFGLLLDFFYTGHLALT--SGNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp HHHCHHHHHHHTTTT----CCCEEECGGGHHHHHHHHHHHHHSCCCCC--TTTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred hhcCHHHHHHHCCCC----CCeEEeCCCCHHHHHHHHHHHcCCCCccC--HHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 578999999998876 45799999999999999999999999766 67899999999999999999999999876
No 14
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.53 E-value=4.9e-15 Score=116.40 Aligned_cols=72 Identities=14% Similarity=0.214 Sum_probs=64.9
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcC--CCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHH
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIP--GVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLE 78 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~--~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~ 78 (293)
|++||||++||.++ +...|.|+ ++++++|+.+|+|+|||.++.+ .+++.+++.+|++|+++.|++.|+++|.
T Consensus 42 aa~S~yF~~~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~--~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 42 ASFSEYFGAIYRST----SENNVFLDQSQVKADGFQKLLEFIYTGTLNLD--SWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp HHHCHHHHHHHTTC----CCSCEECCTTTCCHHHHHHHHHHHHHSCCCCC--TTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred hhcCHHHHHHHcCC----CCCeEEeecCCCCHHHHHHHHHHHcCCCcccC--HHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 57899999999876 24568888 9999999999999999999765 6789999999999999999999999985
No 15
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.53 E-value=6.1e-15 Score=116.87 Aligned_cols=72 Identities=11% Similarity=0.201 Sum_probs=65.9
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHHh
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLEQ 79 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~ 79 (293)
|++||||++||.++ ..+|+|+|+++++|+.+|+|+|||.++.+ .+++.+++.+|++|+++.|++.|+++|.+
T Consensus 48 aa~S~yF~~~f~~~-----~~~i~l~~~~~~~f~~ll~~~Ytg~~~~~--~~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 48 ACTSKMFEILFHRN-----SQHYTLDFLSPKTFQQILEYAYTATLQAK--AEDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp HHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHHHSCCCCC--GGGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hhcCHHHHHHHcCC-----CcEEEeCCCCHHHHHHHHHhhcCCCcCCC--HHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 57899999999863 45799999999999999999999999766 67899999999999999999999999987
No 16
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.52 E-value=1.7e-15 Score=122.51 Aligned_cols=79 Identities=15% Similarity=0.190 Sum_probs=63.8
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHHhc
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLEQG 80 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~~ 80 (293)
|++|+||++||.+++ ..+|+|+|+++++|+.+|+|+|||.+..+ .+++.+|+.+|++|+++.|++.|+++|.+
T Consensus 45 aa~S~yF~~mf~~~~----~~~i~l~~~~~~~f~~lL~fiYtg~~~i~--~~~v~~ll~~A~~l~i~~L~~~C~~~l~~- 117 (135)
T 2yy9_A 45 ACCSHFFQRIYGDGT----GGSVVLPAGFAEIFGLLLDFFYTGHLALT--SGNRDQVLLAAKELRVPEAVELCQSFQPQ- 117 (135)
T ss_dssp HHHCHHHHHTCC--------CCEEECGGGHHHHHHHHHHHHHSCCCCC--TTTHHHHHHHHHHTTCHHHHHHHHHCCC--
T ss_pred HHhCHHHHHHHcCCC----CCeEEeCCCCHHHHHHHHHHHhCCCCCCC--HHHHHHHHHHHHHhCcHHHHHHHHHHHHH-
Confidence 578999999998877 45799999999999999999999999766 67899999999999999999999999998
Q ss_pred CCChHh
Q 039069 81 GLTKEN 86 (293)
Q Consensus 81 ~l~~~N 86 (293)
.+...+
T Consensus 118 ~l~~~~ 123 (135)
T 2yy9_A 118 TSVGQA 123 (135)
T ss_dssp ------
T ss_pred hccCCC
Confidence 465443
No 17
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.46 E-value=1.3e-14 Score=114.72 Aligned_cols=71 Identities=8% Similarity=0.134 Sum_probs=64.0
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHH
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLE 78 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~ 78 (293)
|++||||++||.+ +..+|.++++++++|+.+|+|+|||.+..+ .+++.+++.+|++|+++.|++.|+++|.
T Consensus 47 aa~S~yF~~~f~~-----~~~~i~l~~~~~~~f~~ll~~~Ytg~~~i~--~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 47 AACSEYFKMLFVD-----QKDVVHLDISNAAGLGQVLEFMYTAKLSLS--PENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp HHHCHHHHHHHHH-----CCSGGGGGGCCHHHHHHHHHHHHHSCCCCC--TTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHcCHHHHHHHcC-----CCCEEEeCCCCHHHHHHHHHHHcCCCCccC--HHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 4789999999975 245789999999999999999999999766 6789999999999999999999999985
No 18
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.46 E-value=3.1e-15 Score=119.07 Aligned_cols=73 Identities=14% Similarity=0.188 Sum_probs=65.7
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCC-CCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHH
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPG-VPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFL 77 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~-vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L 77 (293)
|++|+||++||.+++.| ..+|.+++ +++++|+.+|+|+|||.+..+ .+++.+++.+|++|+++.|++.|++||
T Consensus 52 aa~S~yF~~~f~~~~~e--~~~i~l~~~~~~~~f~~~l~~iYtg~~~~~--~~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 52 AACSEYFWQALVGQTKN--DLVVSLPEEVTARGFGPLLQFAYTAKLLLS--RENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp HHHBHHHHHHHTTCCCS--SCEEECCTTCCHHHHHHHHHHHTTSEEEEC--TTTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred HHcCHHHHHHhcCCCCC--CcEEEeCCCCCHHHHHHHHHhHcCCceEEC--HHHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 47899999999999876 56799998 999999999999999998665 678999999999999999999998753
No 19
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.45 E-value=3.9e-15 Score=118.57 Aligned_cols=74 Identities=15% Similarity=0.144 Sum_probs=63.7
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEc-CCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHH
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKI-PGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLE 78 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L-~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~ 78 (293)
|++||||++||.+++.|+ ..|.+ .++++++|+.+|+|+|||.+..+ .+++.+++.+|++|+++.|++.|+++|.
T Consensus 49 aa~S~yF~~mf~~~~~e~--~~i~l~~~v~~~~f~~lL~~iYtg~~~i~--~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 49 AACSSYFHSRIVGQADGE--LNITLPEEVTVKGFEPLIQFAYTAKLILS--KENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp HHHBHHHHHHHTTC---C--EEEECCTTSCHHHHHHHHHHHHHSEEEEE--TTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred HHcCHHHHHHHcCCCCCC--ceEeecCCcCHHHHHHHHHHhcCCCcccC--HHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 578999999999998765 47899 59999999999999999998665 6789999999999999999999998864
No 20
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.44 E-value=8.2e-15 Score=117.40 Aligned_cols=73 Identities=11% Similarity=0.161 Sum_probs=59.9
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcC-CCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHHh
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIP-GVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLEQ 79 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~-~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~ 79 (293)
|++||||++||.++ ...+|.|+ ++++++|+.+|+|+|||.+..+ .+++.+++.+|++|+++.|++.|+++|.+
T Consensus 53 aa~S~~F~~~f~~~----~~~~i~l~~~~~~~~f~~ll~~iYtg~~~i~--~~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 53 AASSSYFRDLFNNS----RSAVVELPAAVQPQSFQQILSFCYTGRLSMN--VGDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp HHHBHHHHHHHHHC----CCSEEECCTTCCHHHHHHHHHHHHHSEEECC--TTTHHHHHHHHHHTTBTTSSCC-------
T ss_pred HHcCHHHHHHHcCC----CCCEEEECCCCCHHHHHHHHHHHhCCccccC--HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 47899999999876 45689996 9999999999999999998665 67899999999999999999999999987
No 21
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.33 E-value=2.9e-13 Score=107.20 Aligned_cols=68 Identities=16% Similarity=0.160 Sum_probs=59.8
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHHh
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLEQ 79 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~ 79 (293)
|++|+||++ ....|.|+|+++++|+.+|+|+|||.+..+ .+++.+++.+|++|+++.|++.|++++..
T Consensus 50 aa~S~yF~~---------~~~~i~l~~v~~~~f~~ll~fiYtg~~~i~--~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 50 AGVSQQLGR---------RGQWALGEGISPSTFAQLLNFVYGESVELQ--PGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp HTTCGGGCC---------CEEEECCSSCCHHHHHHHHHHHTTCCEEEC--GGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHcCHHHhc---------CCCEEEeCCCCHHHHHHHHHHHcCCCcCcC--HHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 589999974 345799999999999999999999999665 68899999999999999999999999765
No 22
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.31 E-value=1.7e-12 Score=102.18 Aligned_cols=64 Identities=13% Similarity=0.155 Sum_probs=57.6
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCCCC-CcchHHHHHHHHHHHHhhcCcchHHH
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSSCF-EEEDLKKFVLHLLVLSHSYLVPPLKR 71 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~i-~~~~~~~~v~~LL~lA~~y~v~~Lk~ 71 (293)
|++||||++||.++ ..+|.|+++++++|+.+|+|+|||.+ ..+ .+++.+++.+|++|+++.|++
T Consensus 51 aa~S~~F~~~f~~~-----~~~i~l~~~~~~~f~~~l~~~Ytg~~~~~~--~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 51 SASSTYFHQLFSVA-----GQVVELSFIRAEIFAEILNYIYSSKIVRVR--SDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHTTSCCCSCC--HHHHHHHHHHHHHHTCHHHHT
T ss_pred HHcCHHHHHHHcCC-----CCEEEeCCCCHHHHHHHHHhhcCCCcCCCC--HHHHHHHHHHHHHhCccccCc
Confidence 57899999999875 46899999999999999999999999 455 788999999999999999874
No 23
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.25 E-value=1.5e-11 Score=102.15 Aligned_cols=100 Identities=10% Similarity=0.127 Sum_probs=78.4
Q ss_pred CCCCHHHHHHhcC-CCC-cCCcCeEEcCCCCHHHHHHHHhhhhCCC--------------------------CCcchHHH
Q 039069 1 SIASPVLGNILQQ-SKV-KNGFKYIKIPGVPHEAVYAFFRFLYSSC--------------------------FEEEDLKK 52 (293)
Q Consensus 1 Aa~S~yF~aMf~~-~~~-E~~~~~I~L~~vs~~~~~~~L~flYtg~--------------------------i~~~~~~~ 52 (293)
|+.|+||++||.+ ++. |+....|+|++|++.+++.+++|+|++. +..+ .+
T Consensus 20 A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~id--~~ 97 (159)
T 2ast_A 20 AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVD--QG 97 (159)
T ss_dssp HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHTCSC--HH
T ss_pred HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHcCC--HH
Confidence 4689999999987 776 6777789999999999999999999987 3333 78
Q ss_pred HHHHHHHHHhhcCcchHHHHHHHHHHhc--CCChHhHHHHHHHhhhCChHHH
Q 039069 53 FVLHLLVLSHSYLVPPLKRVCEYFLEQG--GLTKENVIDVLQLARNCDAPRL 102 (293)
Q Consensus 53 ~v~~LL~lA~~y~v~~Lk~~C~~~L~~~--~l~~~Nvv~il~lA~~~~~~~L 102 (293)
++.+|+.+|+++++..|.+.|.+++... ..+++.+-.++.+...+..++.
T Consensus 98 ~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt~eeir~~f~I~~d~t~eEe 149 (159)
T 2ast_A 98 TLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEE 149 (159)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCCHHHHHHHTTCCCCSCTTHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHcCCCCCCCHHHH
Confidence 8999999999999999999999999551 1577777777777666655443
No 24
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=98.79 E-value=6.2e-09 Score=79.20 Aligned_cols=63 Identities=11% Similarity=0.180 Sum_probs=48.9
Q ss_pred CCCCHHHHHHhcC--CCCcCCcCeEEcCCCCHHHHHHHHhhhh-----C---CCCC---cchHHHHHHHHHHHHhhcC
Q 039069 1 SIASPVLGNILQQ--SKVKNGFKYIKIPGVPHEAVYAFFRFLY-----S---SCFE---EEDLKKFVLHLLVLSHSYL 65 (293)
Q Consensus 1 Aa~S~yF~aMf~~--~~~E~~~~~I~L~~vs~~~~~~~L~flY-----t---g~i~---~~~~~~~v~~LL~lA~~y~ 65 (293)
|+.|+||++||.+ ++.|+....|+|++|++.+++.+++|+| + +.++ .+ .+++.+|+.+|++++
T Consensus 21 A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~--~~~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 21 ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIA--PEIALELLMAANFLD 96 (97)
T ss_dssp HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCC--GGGHHHHHHHHHHHT
T ss_pred HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCC--HHHHHHHHHHHhhhC
Confidence 5789999999976 6778778899999999999999999999 5 5554 33 678999999999986
No 25
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.78 E-value=4.3e-09 Score=81.22 Aligned_cols=83 Identities=14% Similarity=0.196 Sum_probs=64.3
Q ss_pred CCChHhHHHHHHHhhhCChHHHHHHHHHHHHHhHHHHhcccccchhhhcChHHHHHHHHHhhchHHH--------HHHHH
Q 039069 81 GLTKENVIDVLQLARNCDAPRLSLICVRMVVKDFKAITSTEGWKIMKRANPALEQELVESVVDEDSR--------KQERL 152 (293)
Q Consensus 81 ~l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~nf~~v~~se~f~~L~~~~p~l~~ell~~ll~~d~~--------~~~w~ 152 (293)
.++++||++++.+|..|++++|...|..||.+||.+|..+++|..| ..+.+..++.+|-. -.+|.
T Consensus 7 ~L~~~NCl~i~~~A~~~~~~~L~~~a~~fi~~nF~~v~~~~eFl~L-------~~~~L~~lL~sdv~~E~~vf~av~~Wv 79 (105)
T 2eqx_A 7 GVQVGNCLQVMWLADRHSDPELYTAAKHCAKTHLAQLQNTEEFLHL-------PHRLLTDIISDGVPCSQNPTEAIEAWI 79 (105)
T ss_dssp CCCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHTCHHHHTSHHHHHS-------CHHHHHHHHHTCEETTSCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcccHhhC-------CHHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999986 44555566555511 15887
Q ss_pred HHHHHHHHHHhHHHHHHHHHHH
Q 039069 153 RKVEERKVYLQLHEAMEALLHI 174 (293)
Q Consensus 153 ~~~~e~~vy~~L~~~m~lL~h~ 174 (293)
+++.+. +.+...++|.|+
T Consensus 80 ~~d~~~----R~~~~~~Ll~~V 97 (105)
T 2eqx_A 80 NFNKEE----REAFAESLRTSL 97 (105)
T ss_dssp HTTHHH----HHHHHHHHHHHC
T ss_pred HcCHHH----HHHHHHHHHHHH
Confidence 776653 234455566555
No 26
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.71 E-value=4.1e-09 Score=87.54 Aligned_cols=96 Identities=7% Similarity=0.111 Sum_probs=59.2
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCCCCC-------------------------cchHHHHHH
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSSCFE-------------------------EEDLKKFVL 55 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~i~-------------------------~~~~~~~v~ 55 (293)
|..|++|++||.+.. ....|+|++|+..+++.++.|+|+..-. .....+++.
T Consensus 23 A~~S~~ik~ml~~~~---~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~l~ 99 (160)
T 2p1m_A 23 ALESQTIAHMVEDDC---VDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLF 99 (160)
T ss_dssp HHTCTTTC---------------CCTTSCHHHHHHHHHC-----------------------------------------
T ss_pred HHHhHHHHHHHHccC---CCCceeCCcCcHHHHHHHHHHHHHcccCCCcccccccccccccchhhHHHHHHHcCCHHHHH
Confidence 457999999997643 2347999999999999999999997521 022357899
Q ss_pred HHHHHHhhcCcchHHHHHHHHHHhcCC---ChHhHHHHHHHhhhCChH
Q 039069 56 HLLVLSHSYLVPPLKRVCEYFLEQGGL---TKENVIDVLQLARNCDAP 100 (293)
Q Consensus 56 ~LL~lA~~y~v~~Lk~~C~~~L~~~~l---~~~Nvv~il~lA~~~~~~ 100 (293)
+|+.+|++++|..|.++|.+++.. .| +++.+-.++.++..+..+
T Consensus 100 eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~eeir~~f~I~nd~t~e 146 (160)
T 2p1m_A 100 ELILAANYLNIKNLLDLTCQTVAD-MIKGKTPEEIRTTFNIKNDFTPE 146 (160)
T ss_dssp -CHHHHHHTTCHHHHHHHHHHHHH-TTTTCCHHHHHHHTTCCCCCCHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHcCCCCCCCHH
Confidence 999999999999999999999998 68 788887777777666543
No 27
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.71 E-value=1.9e-08 Score=81.82 Aligned_cols=84 Identities=8% Similarity=0.058 Sum_probs=66.6
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCCCCC------------------------cchHHHHHHH
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSSCFE------------------------EEDLKKFVLH 56 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~i~------------------------~~~~~~~v~~ 56 (293)
|..|++|++||.+.- ...|+|++|+..+++.+++|+|+..-. .....+++.+
T Consensus 21 A~~S~~ik~ml~~~~----~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~vd~~~l~e 96 (141)
T 1fs1_B 21 AKQSVTIKTMLEDLG----MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFE 96 (141)
T ss_dssp GGTCHHHHHHHHHTC----CSSEECTTCCHHHHHHHHHHHHHHTTCC-----------------HHHHHHTCSCHHHHHH
T ss_pred HHHhHHHHHHHHhcC----CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHHhCCHHHHHH
Confidence 568999999996521 457999999999999999999986511 1122678999
Q ss_pred HHHHHhhcCcchHHHHHHHHHHhcCCChHhHHH
Q 039069 57 LLVLSHSYLVPPLKRVCEYFLEQGGLTKENVID 89 (293)
Q Consensus 57 LL~lA~~y~v~~Lk~~C~~~L~~~~l~~~Nvv~ 89 (293)
|+.+|+++++..|.+.|.+++.. .|...+.-+
T Consensus 97 Li~AAnyL~I~~Lldl~c~~vA~-~ikgkt~ee 128 (141)
T 1fs1_B 97 LILAANYLDIKGLLDVTCKTVAN-MIKGKTPEE 128 (141)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHH-HHTTCCHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHH-HHcCCCHHH
Confidence 99999999999999999999887 465555444
No 28
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A
Probab=98.66 E-value=1.4e-08 Score=77.31 Aligned_cols=84 Identities=25% Similarity=0.636 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHhhcCCcccCCCcccccCCCCCCCccchhhHHHHHHHHhhccccCCCCCcchHHHHHHHHHHHhcCCCCC
Q 039069 164 LHEAMEALLHICRDGCRTIGPRDKVLKGSQVACNFPACKGLEALVRHFSNCKTRVPGGCVHCKRMWQLLELHSRMCNEPD 243 (293)
Q Consensus 164 L~~~m~lL~h~~~~~c~~~~~~~~~~~~~~~~c~~~~c~~~~~l~~h~~~c~~r~~~gC~~C~~~~~l~~~ha~~c~~~~ 243 (293)
++..+-+|.|+.. |+...+ ..+..+.|.++.|..||.|+.|+.+|.....-.-++|.-.++|+ .|.+.|.+.+
T Consensus 16 iqqqL~lL~HA~k--C~~~e~----~~g~~~~C~lp~C~~mK~ll~Hm~~C~~g~~C~~~~C~sSr~ii-~H~k~C~~~~ 88 (101)
T 1l3e_B 16 IQQQLVLLLHAHK--CQRREQ----ANGEVRQCNLPHCRTMKNVLNHMTHCQSGKSCQVAHCASSRQII-SHWKNCTRHD 88 (101)
T ss_dssp HHHHHHHHHHHHH--HHHHHT----TTSSCCCCSCHHHHHHHHHHHHHTTCCSCSSSSCHHHHHHHHHH-HHHHHCCSSC
T ss_pred HHHHHHHHHHHHH--cCCccc----cCCcCCCCCCCccHHHHHHHHHHHHccCCCCCCCCCCHHHHHHH-HHHHhCCCCC
Confidence 5666889999966 884221 11223589999999999999999999863343446799999998 5999999985
Q ss_pred CCCCCCChHHHHHH
Q 039069 244 LCKVPLCRHFKEKM 257 (293)
Q Consensus 244 ~c~vp~c~~~k~~~ 257 (293)
|+| |..+|+.+
T Consensus 89 -CpV--C~pvk~~~ 99 (101)
T 1l3e_B 89 -CPV--CLPLKNAG 99 (101)
T ss_dssp -CTT--HHHHHCCS
T ss_pred -CCc--CHHHHhhh
Confidence 955 99998654
No 29
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=97.98 E-value=2.8e-05 Score=64.85 Aligned_cols=98 Identities=10% Similarity=0.133 Sum_probs=69.4
Q ss_pred CCCCHHHHHHhcCCCC----cCCcCeEEcCCCCHHHHHHHHhhhhCCCCC-----------------------cchHHHH
Q 039069 1 SIASPVLGNILQQSKV----KNGFKYIKIPGVPHEAVYAFFRFLYSSCFE-----------------------EEDLKKF 53 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~----E~~~~~I~L~~vs~~~~~~~L~flYtg~i~-----------------------~~~~~~~ 53 (293)
|..|.++++|+...-. +.....|+|++|+..+++.++.|+|...-. .....+.
T Consensus 26 A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~~~ 105 (169)
T 3v7d_A 26 AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQEM 105 (169)
T ss_dssp HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC--------CCCCCHHHHHHTCSCHHH
T ss_pred HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCcccccccccccccccHHHHHHHcCCHHH
Confidence 4579999999964322 223368999999999999999999874321 0122477
Q ss_pred HHHHHHHHhhcCcchHHHHHHHHHH---hcCCChHhHHHHHHHhhhCCh
Q 039069 54 VLHLLVLSHSYLVPPLKRVCEYFLE---QGGLTKENVIDVLQLARNCDA 99 (293)
Q Consensus 54 v~~LL~lA~~y~v~~Lk~~C~~~L~---~~~l~~~Nvv~il~lA~~~~~ 99 (293)
+.+|+.+|++++|.+|.+.|.+.+. .| .+++-.-.++.+...+..
T Consensus 106 LfeLi~AAnyLdIk~Lldl~c~~vA~~ikg-ktpeeiR~~f~I~nd~t~ 153 (169)
T 3v7d_A 106 LYEIILAANYLNIKPLLDAGCKVVAEMIRG-RSPEEIRRTFNIVNDFTP 153 (169)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCHHHHHHHHTCCCCCCH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHcC-CCHHHHHHHcCCCCCCCH
Confidence 8999999999999999999999984 43 566666666655544443
No 30
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=97.85 E-value=1.8e-05 Score=60.20 Aligned_cols=65 Identities=15% Similarity=0.176 Sum_probs=51.2
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCCCC---------Cc---chHHHHHHHHHHHHhhcCc
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSSCF---------EE---EDLKKFVLHLLVLSHSYLV 66 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~i---------~~---~~~~~~v~~LL~lA~~y~v 66 (293)
|..|+++++||.+++ |.....|+|++|+..+++.+++|+|...- .. +...+.+.+|+.+|+++++
T Consensus 23 A~~S~~ik~ml~~~~-e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 23 AMISPTLKAMIEGPF-RESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp HTTCHHHHHHHHSST-TTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCCHHHHHHHHHHHHHHCC
T ss_pred HHHhHHHHHHHhccc-ccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCCccCCHHHHHHHHHHHHHhCc
Confidence 467999999998766 55557899999999999999999997430 00 2236789999999998875
No 31
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=97.67 E-value=2e-05 Score=59.54 Aligned_cols=66 Identities=11% Similarity=0.129 Sum_probs=46.6
Q ss_pred CCCCHHHHHHhcC--CCCcCCcCeEEcCCCCHHHHHHHHhhhhCCC--------CC-cchHHHHHHHHHHHHhhcCc
Q 039069 1 SIASPVLGNILQQ--SKVKNGFKYIKIPGVPHEAVYAFFRFLYSSC--------FE-EEDLKKFVLHLLVLSHSYLV 66 (293)
Q Consensus 1 Aa~S~yF~aMf~~--~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~--------i~-~~~~~~~v~~LL~lA~~y~v 66 (293)
|..|+++++||.+ .+.|+....|+|++|+..+++.+++|+|... ++ -....+.+.+|+.+|+++++
T Consensus 20 A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 20 ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 96 (96)
T ss_dssp HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCCCCTTTHHHHHHHHHHHTC
T ss_pred HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCCcccCHHHHHHHHHHHHHhCc
Confidence 4679999999964 3356666789999999999999999998742 10 01225678899999998865
No 32
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=97.22 E-value=0.00026 Score=54.89 Aligned_cols=66 Identities=11% Similarity=0.129 Sum_probs=46.9
Q ss_pred CCCCHHHHHHhcC--CCCcCCcCeEEcCCCCHHHHHHHHhhhhCCC--------CC-cchHHHHHHHHHHHHhhcCc
Q 039069 1 SIASPVLGNILQQ--SKVKNGFKYIKIPGVPHEAVYAFFRFLYSSC--------FE-EEDLKKFVLHLLVLSHSYLV 66 (293)
Q Consensus 1 Aa~S~yF~aMf~~--~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~--------i~-~~~~~~~v~~LL~lA~~y~v 66 (293)
|..|..+++||.. .+.|.....|+|++|+..+++.+++|+|... ++ -....+.+++|+.+|+++++
T Consensus 36 A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~w~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 36 ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112 (112)
T ss_dssp HHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCCCCCCHHHHHHHHHHHHHHTC
T ss_pred HHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCCcccCHHHHHHHHHHHHHhCc
Confidence 3579999999974 3345555689999999999999999997632 10 02236789999999999875
No 33
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.14 E-value=0.00086 Score=51.39 Aligned_cols=73 Identities=11% Similarity=0.015 Sum_probs=55.4
Q ss_pred HHHHHHhcCCCC----cCCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHHh
Q 039069 5 PVLGNILQQSKV----KNGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLEQ 79 (293)
Q Consensus 5 ~yF~aMf~~~~~----E~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~ 79 (293)
.+|.+||.+... ....+++-| |-+|..|..+|+|+.+|.+.... .-....++.-|.+|+++.|++.|.+.|.+
T Consensus 30 s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~-~~~~~~l~~Ea~fy~l~~L~~~l~~~i~~ 106 (107)
T 3drz_A 30 SFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINK-DLAEEGVLEEAEFYNITSLIKLVKDKIRE 106 (107)
T ss_dssp SHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCT-TSCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCC-CCCHHHHHHHHHHCCCHHHHHHHHHHHhc
Confidence 378899976521 123345666 78999999999999999986432 11236688999999999999999998865
No 34
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A
Probab=94.96 E-value=0.049 Score=41.15 Aligned_cols=52 Identities=21% Similarity=0.607 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHhhcCCcccCCCcccccCCCCCCCccchhhHHHHHHHHhhccccCCCCCcchHHHHH
Q 039069 163 QLHEAMEALLHICRDGCRTIGPRDKVLKGSQVACNFPACKGLEALVRHFSNCKTRVPGGCVHCKRMWQ 230 (293)
Q Consensus 163 ~L~~~m~lL~h~~~~~c~~~~~~~~~~~~~~~~c~~~~c~~~~~l~~h~~~c~~r~~~gC~~C~~~~~ 230 (293)
.=...-.+|.|. ..|+. | ..|.|+.|...+.|+.|...|.. .+|++|.-++.
T Consensus 46 ~C~~mK~ll~Hm--~~C~~-g----------~~C~~~~C~sSr~ii~H~k~C~~---~~CpVC~pvk~ 97 (101)
T 1l3e_B 46 HCRTMKNVLNHM--THCQS-G----------KSCQVAHCASSRQIISHWKNCTR---HDCPVCLPLKN 97 (101)
T ss_dssp HHHHHHHHHHHH--TTCCS-C----------SSSSCHHHHHHHHHHHHHHHCCS---SCCTTHHHHHC
T ss_pred ccHHHHHHHHHH--HHccC-C----------CCCCCCCCHHHHHHHHHHHhCCC---CCCCcCHHHHh
Confidence 346677899999 55984 2 38999999999999999999965 59999987653
No 35
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=94.38 E-value=0.035 Score=47.23 Aligned_cols=72 Identities=11% Similarity=0.014 Sum_probs=53.7
Q ss_pred HHHHHhcCCC--C--cCCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHHh
Q 039069 6 VLGNILQQSK--V--KNGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLEQ 79 (293)
Q Consensus 6 yF~aMf~~~~--~--E~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~ 79 (293)
+|..||.+.. . ....+.+-| |-++..|..+|+|+.+|.+.... .-....++.-|.+|+|+.|.+.|.+.|.+
T Consensus 37 ~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~-~~~~~~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 37 FLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINK-DLAEEGVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp STHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCT-TSCHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCC-CCCHHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 6778886542 1 112345666 56999999999999999986532 11134688999999999999999999876
No 36
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=90.44 E-value=0.19 Score=37.31 Aligned_cols=32 Identities=25% Similarity=0.437 Sum_probs=30.2
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHHHh
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVVKD 113 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~n 113 (293)
++.+|+.+++.+|..|+.+.|...|.+|+.++
T Consensus 77 ~~~~~~~~ll~~A~~~~~~~L~~~c~~~l~~~ 108 (109)
T 2vkp_A 77 LEADTVLATLYAAKKYIVPALAKACVNFLETS 108 (109)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 67899999999999999999999999999876
No 37
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A
Probab=89.95 E-value=0.38 Score=37.42 Aligned_cols=49 Identities=18% Similarity=0.570 Sum_probs=39.0
Q ss_pred HHHHHHHhhccccCCCCCc--chHHHHHHHHHHHhcCCCCCCCCCCCChHHHHHH
Q 039069 205 EALVRHFSNCKTRVPGGCV--HCKRMWQLLELHSRMCNEPDLCKVPLCRHFKEKM 257 (293)
Q Consensus 205 ~~l~~h~~~c~~r~~~gC~--~C~~~~~l~~~ha~~c~~~~~c~vp~c~~~k~~~ 257 (293)
-.++.|...|. .++|. .|..|-.|++ |...|.....|..|.|..+..-+
T Consensus 17 l~~L~HA~~C~---~~~C~~p~C~~mK~ll~-H~~~C~~r~~~~c~~C~~~~~Ll 67 (121)
T 3t92_A 17 IQSLVHAAQCR---NANCSLPSCQKMKRVVQ-HTKGCKRKTNGGCPICKQLIALA 67 (121)
T ss_dssp HHHHHHHHHCC---CTTCCCHHHHHHHHHHH-HHHHCSSTTTTTCHHHHHHHHHH
T ss_pred HHHHHHHccCc---CCCCCCchhHHHHHHHH-HHHHccCCCCCCCCchHHHHHHH
Confidence 35677999995 35786 5999999998 99999864469999998887644
No 38
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.46 E-value=1.1 Score=33.46 Aligned_cols=30 Identities=13% Similarity=0.064 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHhhcCcchHHHHHHHHHHhc
Q 039069 51 KKFVLHLLVLSHSYLVPPLKRVCEYFLEQG 80 (293)
Q Consensus 51 ~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~~ 80 (293)
.+|...++.+|+.|+.+.|.+.|.+|+..+
T Consensus 10 ~~NCl~i~~~A~~~~~~~L~~~a~~fi~~n 39 (105)
T 2eqx_A 10 VGNCLQVMWLADRHSDPELYTAAKHCAKTH 39 (105)
T ss_dssp TTTHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999884
No 39
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=84.79 E-value=0.81 Score=34.95 Aligned_cols=32 Identities=16% Similarity=0.289 Sum_probs=29.7
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHHHh
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVVKD 113 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~n 113 (293)
++.+|+.+++.+|..|+.+.|.+.|.+|+.+|
T Consensus 95 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 95 LREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 67899999999999999999999999998764
No 40
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=83.54 E-value=0.41 Score=37.32 Aligned_cols=35 Identities=23% Similarity=0.240 Sum_probs=29.0
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHHHhHHH
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVVKDFKA 116 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~nf~~ 116 (293)
++.+|+.+++.+|..|+.+.|.+.|.+|+.+++..
T Consensus 87 i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l~~ 121 (135)
T 2yy9_A 87 LTSGNRDQVLLAAKELRVPEAVELCQSFQPQTSVG 121 (135)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCCC-----
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccC
Confidence 68899999999999999999999999999988764
No 41
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=81.50 E-value=0.71 Score=35.00 Aligned_cols=32 Identities=31% Similarity=0.340 Sum_probs=27.7
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHHHh
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVVKD 113 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~n 113 (293)
++.+|+.+++.+|..|+.+.|.+.|.+|+.++
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 86 LTSGNRDQVLLAARELRVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHCC---
T ss_pred cCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHc
Confidence 67899999999999999999999999998765
No 42
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=81.40 E-value=1.3 Score=33.43 Aligned_cols=30 Identities=30% Similarity=0.344 Sum_probs=28.0
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHH
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVV 111 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~ 111 (293)
++.+|+.+++.+|..++.+.|.+.|.+|+.
T Consensus 88 i~~~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 88 LSPENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 678999999999999999999999999874
No 43
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=80.45 E-value=1.6 Score=33.04 Aligned_cols=32 Identities=22% Similarity=0.252 Sum_probs=29.4
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHHHh
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVVKD 113 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~n 113 (293)
++.+|+.+++.+|..|+.+.|.+.|.+|+.+.
T Consensus 89 ~~~~~~~~ll~~A~~~~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 89 AKAEDLDDLLYAAEILEIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHh
Confidence 67899999999999999999999999998753
No 44
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=80.03 E-value=1.6 Score=32.68 Aligned_cols=30 Identities=20% Similarity=0.148 Sum_probs=28.0
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHH
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVV 111 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~ 111 (293)
++.+|+.+++.+|..|+.+.|.+.|.+|+.
T Consensus 86 ~~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 86 LDSWNVKEIHQAADYLKVEEVVTKCKIKME 115 (116)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 678999999999999999999999999874
No 45
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=79.59 E-value=0.46 Score=37.10 Aligned_cols=34 Identities=21% Similarity=0.300 Sum_probs=31.1
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHHHhHH
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVVKDFK 115 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~nf~ 115 (293)
++.+|+.+++.+|..|+.+.|.+.|.+|+..++.
T Consensus 101 i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 101 LSKDNVDEVCRCVEFLSVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp CCTTTHHHHHHHHHHHTCGGGHHHHHHHTTCCCS
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhcc
Confidence 6889999999999999999999999999987653
No 46
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=78.84 E-value=2 Score=32.25 Aligned_cols=29 Identities=31% Similarity=0.569 Sum_probs=27.3
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHH
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMV 110 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I 110 (293)
++.+|+.+++.+|..|+.+.|.+.|.+|+
T Consensus 91 ~~~~~~~~ll~~A~~~~i~~L~~~C~~~L 119 (120)
T 2if5_A 91 VSTANVGDILSAARLLEIPAVSHVCADLL 119 (120)
T ss_dssp CCGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 67899999999999999999999999986
No 47
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A
Probab=76.22 E-value=2 Score=32.77 Aligned_cols=46 Identities=20% Similarity=0.626 Sum_probs=20.1
Q ss_pred HHHHHHhhccccCCCCCc--chHHHHHHHHHHHhcCCCCCCCCCCCChHHHH
Q 039069 206 ALVRHFSNCKTRVPGGCV--HCKRMWQLLELHSRMCNEPDLCKVPLCRHFKE 255 (293)
Q Consensus 206 ~l~~h~~~c~~r~~~gC~--~C~~~~~l~~~ha~~c~~~~~c~vp~c~~~k~ 255 (293)
.++-|...|.. +.|. .|..|-.|+ .|...|....+..-|.|..+-.
T Consensus 17 ~~L~HA~~C~~---~~C~~~~C~~mK~ll-~H~~~C~~r~~~gC~~Ck~~~~ 64 (112)
T 3p57_P 17 QSLVHACQCRN---ANCSLPSCQKMKRVV-QHTKGCKRKTNGGCPICKQLIA 64 (112)
T ss_dssp HHHHHHHHCCC---TTCCCTTHHHHHHHH-TCTTCC-------CCCHHHHHH
T ss_pred HHHHHHccCCC---CCCCChhhHHHHHHH-HHHHHccCCCCCCCcccHHHHH
Confidence 34556666643 2343 566655553 3555665422233455655444
No 48
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=72.57 E-value=2.8 Score=32.49 Aligned_cols=57 Identities=11% Similarity=-0.061 Sum_probs=41.1
Q ss_pred cCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHH-HH-HHHHHH
Q 039069 20 FKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLK-RV-CEYFLE 78 (293)
Q Consensus 20 ~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk-~~-C~~~L~ 78 (293)
.+.+-| |=++..|..+|+|+-+|.+.... ...+..++.-|++|+|+.+. +. |...+.
T Consensus 52 ~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~-~~~~~~l~~Ea~fy~i~~l~l~~cC~~~~~ 110 (124)
T 1s1g_A 52 TKEYFF-DRDPEVFRCVLNFYRTGKLHYPR-YECISAYDDELAFYGILPEIIGDCCYEEYK 110 (124)
T ss_dssp SCSEEE-CSCHHHHHHHHHHHHHSCBCCCT-TSCHHHHHHHHHHTTCCGGGBCHHHHHHHH
T ss_pred CCcEEE-cCChHHHHHHHHHHhcCCCCCCC-CcCHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 345666 45999999999999999886432 12367789999999999863 44 444433
No 49
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=70.19 E-value=1.9 Score=33.84 Aligned_cols=29 Identities=24% Similarity=0.399 Sum_probs=27.1
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHH
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMV 110 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I 110 (293)
++.+|+.+++.+|..|+.+.|++.|.+|+
T Consensus 115 i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 115 LNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 67899999999999999999999998875
No 50
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=69.64 E-value=4.1 Score=32.31 Aligned_cols=33 Identities=18% Similarity=0.292 Sum_probs=30.0
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHHHhH
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVVKDF 114 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~nf 114 (293)
++.+|+.+++.+|..|+.+.|...|.+|+.+++
T Consensus 100 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l 132 (172)
T 3htm_A 100 NLDKMADDLLAAADKYALERLKVMCEDALCSNL 132 (172)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhC
Confidence 567899999999999999999999999998653
No 51
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=68.81 E-value=2 Score=33.12 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=26.5
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHHHhHH
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVVKDFK 115 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~nf~ 115 (293)
++.+|+.+++.+|..|+.+.|...|.+++.+++.
T Consensus 91 ~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l~ 124 (145)
T 4eoz_A 91 NLDKMADDLLAAADKYALERLKVMCEDALCSNLS 124 (145)
T ss_dssp TGGGTHHHHHHHHHHTTCHHHHHHHHCC------
T ss_pred CcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC
Confidence 5678999999999999999999999999987654
No 52
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=67.12 E-value=3.4 Score=31.32 Aligned_cols=31 Identities=19% Similarity=0.182 Sum_probs=27.4
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHHH
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVVK 112 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~ 112 (293)
++.+|+.+++..|..++.+.|.+.|.+++.+
T Consensus 87 i~~~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 87 LQPGELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp ECGGGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 6789999999999999999999999988653
No 53
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=65.45 E-value=4.4 Score=30.10 Aligned_cols=48 Identities=8% Similarity=-0.134 Sum_probs=36.9
Q ss_pred cCeEEcCCCCHHHHHHHHhhhhC-CCCCcchHHHHHHHHHHHHhhcCcchH
Q 039069 20 FKYIKIPGVPHEAVYAFFRFLYS-SCFEEEDLKKFVLHLLVLSHSYLVPPL 69 (293)
Q Consensus 20 ~~~I~L~~vs~~~~~~~L~flYt-g~i~~~~~~~~v~~LL~lA~~y~v~~L 69 (293)
.+++-| |=++..|+.+|+|+-| |.+.... ...+..++.-|..|+|+.+
T Consensus 41 ~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~-~~~~~~~~~Ea~fy~i~~~ 89 (100)
T 1t1d_A 41 RNEYFF-DRNRPSFDAILYFYQSGGRLRRPV-NVPLDVFSEEIKFYELGEN 89 (100)
T ss_dssp TTEEEE-CSCSTTHHHHHHHHHTTSCCCCCT-TSCHHHHHHHHHHTTCCHH
T ss_pred ceeEEE-cCChHHHHHHHHHHhcCCcccCCC-CCCHHHHHHHHHHcCCCHH
Confidence 456666 5699999999999999 8885432 1235678899999999884
No 54
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=62.59 E-value=3.8 Score=32.46 Aligned_cols=48 Identities=10% Similarity=-0.054 Sum_probs=37.5
Q ss_pred cCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchH
Q 039069 20 FKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPL 69 (293)
Q Consensus 20 ~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~L 69 (293)
.+.+-| |=++..|+.+|+|+-+|.+.... ...+..++.-|++|+|+.+
T Consensus 74 ~g~yFi-DRdp~~F~~ILnflR~G~l~~p~-~~~~~~l~eEa~fy~i~~l 121 (140)
T 2nz0_B 74 TKEYFF-DRDPEVFRCVLNFYRTGKLHYPR-YECISAYDDELAFYGILPE 121 (140)
T ss_dssp TTEEEE-CSCHHHHHHHHHHHHHSSBCCCT-TSCHHHHHHHHHHHTCCGG
T ss_pred CCeEEE-eCCcHHHHHHHHHHhcCCcCCCC-CcCHHHHHHHHHHcCCChH
Confidence 345666 45999999999999999886432 1236778899999999986
No 55
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=62.58 E-value=1.1 Score=34.27 Aligned_cols=32 Identities=6% Similarity=-0.090 Sum_probs=23.2
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHHHh
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVVKD 113 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~n 113 (293)
++.+|+.+++.+|..++.+.|.+.|.+|+.+.
T Consensus 96 i~~~~~~~ll~~A~~~~i~~l~~~C~~~L~~~ 127 (129)
T 3ga1_A 96 MNVGDQDLLMYTAGFLQIQEIMEKGTEFFLKV 127 (129)
T ss_dssp CCTTTHHHHHHHHHHTTBTTSSCC--------
T ss_pred cCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 78999999999999999999999999998764
No 56
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=61.02 E-value=9.6 Score=32.47 Aligned_cols=33 Identities=21% Similarity=0.298 Sum_probs=29.6
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHHHhH
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVVKDF 114 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~nf 114 (293)
++.+|+.+++..|..|+.+.|...|.+|+.+++
T Consensus 99 i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l 131 (256)
T 3hve_A 99 LNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCI 131 (256)
T ss_dssp CC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTC
T ss_pred ccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhC
Confidence 688999999999999999999999999998653
No 57
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=59.74 E-value=1.3 Score=33.85 Aligned_cols=58 Identities=3% Similarity=-0.127 Sum_probs=40.8
Q ss_pred cCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHH--HHHHHHHh
Q 039069 20 FKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKR--VCEYFLEQ 79 (293)
Q Consensus 20 ~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~--~C~~~L~~ 79 (293)
.+.+-| |=++..|..+|+|+.+|.+.... .-.+..++.-|..|+|+...- -|...+.+
T Consensus 45 ~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~-~~~~~~~~~Ea~fy~i~~~~l~~CC~~~~~~ 104 (115)
T 3kvt_A 45 LNEYFF-DRHPGVFAQIINYYRSGKLHYPT-DVCGPLFEEELEFWGLDSNQVEPCCWMTYTA 104 (115)
T ss_dssp TTEEEE-CSCTTTHHHHHHHHHHSCBCCCS-SSCHHHHHHHHHHHTCCGGGBCGGGSHHHHS
T ss_pred CCcEEE-ecChHHHHHHHHHhcCCCCCCCC-cccHHHHHHHHHHhCCChHHHHHHHHHHHHh
Confidence 455666 56999999999999999885432 112467889999999988432 24444444
No 58
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=57.09 E-value=7.1 Score=34.38 Aligned_cols=42 Identities=19% Similarity=0.272 Sum_probs=33.0
Q ss_pred HHHHHHHhcC--CChHhHHHHHHHhhhCChHHHHHHHHHHHHHh
Q 039069 72 VCEYFLEQGG--LTKENVIDVLQLARNCDAPRLSLICVRMVVKD 113 (293)
Q Consensus 72 ~C~~~L~~~~--l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~n 113 (293)
...+||-.+. ++.+|+.+++.+|..|+.+.|+..|.+++.++
T Consensus 228 ~~L~~iYt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~ 271 (312)
T 3hqi_A 228 EMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSN 271 (312)
T ss_dssp HHHHHHHHSCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHhhcCCCCCChHHHHHHHHHHHHHhCHHHHHHHHHHHHHcc
Confidence 3344554432 45689999999999999999999999999865
No 59
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=56.96 E-value=2.4 Score=31.77 Aligned_cols=48 Identities=4% Similarity=-0.079 Sum_probs=37.0
Q ss_pred cCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchH
Q 039069 20 FKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPL 69 (293)
Q Consensus 20 ~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~L 69 (293)
.+.+-| |=++..|..+|+|+-+|.+.... ...+..++.-|+.|+|+.+
T Consensus 39 ~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~-~~~~~~l~~Ea~fy~i~~l 86 (105)
T 1nn7_A 39 TQQYFF-DRDPDIFRHILNFYRTGKLHYPR-HECISAYDEELAFFGLIPE 86 (105)
T ss_dssp GTEEEE-CSCTTTHHHHHHHHHHSCBCCCT-TSCHHHHHHHHHHHTCCSC
T ss_pred CCcEEE-eCCcHHHHHHHHHHhcCCCCCCC-CcCHHHHHHHHHHcCCCHH
Confidence 345666 45999999999999999886432 1136778899999999985
No 60
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=54.20 E-value=6 Score=34.33 Aligned_cols=40 Identities=25% Similarity=0.341 Sum_probs=33.0
Q ss_pred HHHHHhc--CCChHhHHHHHHHhhhCChHHHHHHHHHHHHHh
Q 039069 74 EYFLEQG--GLTKENVIDVLQLARNCDAPRLSLICVRMVVKD 113 (293)
Q Consensus 74 ~~~L~~~--~l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~n 113 (293)
.+|+-.+ .++.+|+.+++.+|..++.+.|...|.+|+.++
T Consensus 97 l~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~L~~~ 138 (279)
T 3i3n_A 97 IEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKK 138 (279)
T ss_dssp HHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHHHHHc
Confidence 3444433 257899999999999999999999999999864
No 61
>4g9q_A 4-carboxymuconolactone decarboxylase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.77A {Sinorhizobium meliloti}
Probab=43.65 E-value=1.2e+02 Score=26.49 Aligned_cols=97 Identities=12% Similarity=0.163 Sum_probs=52.1
Q ss_pred HHHHHhcCCCCcCCcCeEE--------cCCCCHHHHHHHHhhhhCCCCCc---chHHHHHHHHHHHHhhcCcchHHHHHH
Q 039069 6 VLGNILQQSKVKNGFKYIK--------IPGVPHEAVYAFFRFLYSSCFEE---EDLKKFVLHLLVLSHSYLVPPLKRVCE 74 (293)
Q Consensus 6 yF~aMf~~~~~E~~~~~I~--------L~~vs~~~~~~~L~flYtg~i~~---~~~~~~v~~LL~lA~~y~v~~Lk~~C~ 74 (293)
||+.|+...-.-....... +.++.|+--+...+|+|.+-... +.-+..+..|-.++-.=..+.|+....
T Consensus 19 ~~~~~~~~~~~~aq~~~~~~~~~~pd~l~~~aP~l~~~~~e~~fG~vw~r~~Ld~k~R~Litla~l~A~g~~~~l~~H~~ 98 (269)
T 4g9q_A 19 YFQSMMTTSNAGAQQPNVEGRRFSPDQVRSVAPALEQYTQQRLYGDVWQRPGLNRRDRSLVTIAALIARGEAPALTYYAD 98 (269)
T ss_dssp -------------CCSCGGGSSSCHHHHHTTCHHHHHHHHHTTTTTGGGCTTSCHHHHHHHHHHHHHHTTCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccccCCHHHHHhhCcHHHHHHHHhhhhcccCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 8999985432111111122 34566666677788998864432 221333443444444445678999999
Q ss_pred HHHHhcCCChHhHHHHH-HHhhhCChHHHH
Q 039069 75 YFLEQGGLTKENVIDVL-QLARNCDAPRLS 103 (293)
Q Consensus 75 ~~L~~~~l~~~Nvv~il-~lA~~~~~~~L~ 103 (293)
..+..| ++++-+.+++ +++.-.|.|...
T Consensus 99 ~Al~~G-~T~~EI~Evl~q~~~Y~G~P~a~ 127 (269)
T 4g9q_A 99 QALENG-VKPSEISETITHLAYYSGWGKAM 127 (269)
T ss_dssp HHHHTT-CCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHHHcC-CCHHHHHHHHHHHHHhccHHHHH
Confidence 999997 9999999875 556666666643
No 62
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=41.59 E-value=1.2 Score=33.89 Aligned_cols=30 Identities=23% Similarity=0.326 Sum_probs=26.6
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHH
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVV 111 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~ 111 (293)
++.+|+.+++.+|..|+.+.|.+.|.+|+.
T Consensus 94 i~~~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 94 LSKENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp EETTTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred cCHHHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 678999999999999999999999988753
No 63
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=40.10 E-value=29 Score=27.53 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=31.4
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHHHhHH
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVVKDFK 115 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~nf~ 115 (293)
++.+|+.+++..|...+...|.+.|..|++..+.
T Consensus 94 id~~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~ 127 (159)
T 2ast_A 94 VDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 127 (159)
T ss_dssp SCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 8999999999999999999999999999986554
No 64
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=30.94 E-value=1.6 Score=33.07 Aligned_cols=28 Identities=25% Similarity=0.394 Sum_probs=24.8
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHH
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRM 109 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~ 109 (293)
++.+|+.+++.+|..++.+.|.+.|.+|
T Consensus 97 ~~~~~v~~ll~~A~~l~i~~L~~~C~~~ 124 (125)
T 3ohu_A 97 LSRENIREVIRCAEFLRMHNLEDSCFSF 124 (125)
T ss_dssp ECTTTHHHHHHHHHHHTBSSCTTSSCCC
T ss_pred ECHHHHHHHHHHHHHhCCHHHHHHHHHh
Confidence 6789999999999999999998887654
No 65
>3ip4_B Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase; multi protein complex, ligase, ATP-binding, nucleotide-bindi protein biosynthesis; 1.90A {Staphylococcus aureus subsp} PDB: 2df4_B 2dqn_B* 2g5h_B 2g5i_B* 2f2a_B
Probab=25.73 E-value=2e+02 Score=27.32 Aligned_cols=71 Identities=7% Similarity=0.156 Sum_probs=42.0
Q ss_pred CCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHHhcCCChHhHHHHHHHhhhCChHHHHHHHH
Q 039069 28 VPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLEQGGLTKENVIDVLQLARNCDAPRLSLICV 107 (293)
Q Consensus 28 vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~~~l~~~Nvv~il~lA~~~~~~~L~~~c~ 107 (293)
++++.|..++..+..|.|+.. .+.++| ...+..+ -+++.+++-..+...-+...|...|.
T Consensus 364 i~p~~la~li~li~~g~Is~~----~ak~vl---------------~~~~~~~-~~p~~iVee~GL~qisD~~eLe~iV~ 423 (483)
T 3ip4_B 364 LTPENLAGMIKLIEDGTMSSK----IAKKVF---------------PELAAKG-GNAKQIMEDNGLVQISDEATLLKFVN 423 (483)
T ss_dssp CCHHHHHHHHHHHHHTSSCHH----HHHHHH---------------HHHHHHC-CCHHHHHHTTTCCCBCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCccHH----HHHHHH---------------HHHHhcC-CCHHHHHHhcCCccCCCHHHHHHHHH
Confidence 677888888887777777433 222222 2233332 45555555444444445556777788
Q ss_pred HHHHHhHHHHh
Q 039069 108 RMVVKDFKAIT 118 (293)
Q Consensus 108 ~~I~~nf~~v~ 118 (293)
.-|..|-..|.
T Consensus 424 eVIa~np~~v~ 434 (483)
T 3ip4_B 424 EALDNNEQSVE 434 (483)
T ss_dssp HHHHHCHHHHH
T ss_pred HHHHHCHHHHH
Confidence 88887777764
No 66
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=24.70 E-value=67 Score=24.81 Aligned_cols=34 Identities=15% Similarity=0.203 Sum_probs=31.5
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHHHhHH
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVVKDFK 115 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~nf~ 115 (293)
++.+++.+++..|...+...|.+.|..+++..+.
T Consensus 89 vd~~~l~eLi~AAnyL~I~~Lldl~c~~vA~~ik 122 (141)
T 1fs1_B 89 VDQGTLFELILAANYLDIKGLLDVTCKTVANMIK 122 (141)
T ss_dssp SCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHc
Confidence 8999999999999999999999999999987654
Done!