Query 039069
Match_columns 293
No_of_seqs 298 out of 1494
Neff 7.6
Searched_HMMs 13730
Date Mon Mar 25 09:44:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039069.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039069hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1f81a_ g.53.1.1 (A:) CREB-bin 99.9 1.4E-25 1E-29 166.2 7.2 81 161-256 7-87 (87)
2 d1l8ca_ g.53.1.1 (A:) CREB-bin 99.8 2E-19 1.5E-23 135.0 4.3 87 163-259 8-94 (95)
3 d1r29a_ d.42.1.1 (A:) B-cell l 99.6 5.4E-16 4E-20 121.5 5.6 77 1-79 45-121 (122)
4 d1buoa_ d.42.1.1 (A:) Promyelo 99.5 3.8E-15 2.8E-19 116.7 5.6 72 1-79 48-119 (121)
5 d2c9wc1 d.42.1.1 (C:17-112) El 96.9 0.00068 4.9E-08 49.2 5.3 65 1-65 20-95 (96)
6 d1hv2a_ d.42.1.1 (A:) Elongin 96.7 0.0019 1.4E-07 46.9 6.5 65 1-66 23-99 (99)
7 d1l8ca_ g.53.1.1 (A:) CREB-bin 93.8 0.037 2.7E-06 39.5 4.7 50 164-229 40-89 (95)
8 d1nexa2 d.42.1.1 (A:4-103) Cen 88.9 0.16 1.1E-05 34.0 3.4 42 1-42 20-65 (72)
9 d1fs1b2 d.42.1.1 (B:2-68) Cycl 88.2 0.21 1.6E-05 32.2 3.6 38 1-42 20-57 (61)
10 d1fs1b1 a.157.1.1 (B:86-140) C 87.4 0.3 2.2E-05 30.9 3.8 37 51-88 12-48 (55)
11 d1r29a_ d.42.1.1 (A:) B-cell l 85.7 0.33 2.4E-05 35.4 3.8 32 82-113 91-122 (122)
12 d1nn7a_ d.42.1.2 (A:) Potassiu 83.7 0.073 5.3E-06 38.5 -0.8 60 18-79 37-98 (105)
13 d1f81a_ g.53.1.1 (A:) CREB-bin 83.7 0.41 3E-05 33.2 3.3 49 165-229 34-85 (87)
14 d1nexa1 a.157.1.1 (A:116-185) 82.3 0.56 4E-05 31.1 3.4 44 51-95 13-59 (70)
15 d1buoa_ d.42.1.1 (A:) Promyelo 80.7 0.71 5.2E-05 33.6 3.9 30 82-111 89-118 (121)
16 d3kvta_ d.42.1.2 (A:) akv3.1 v 79.3 0.13 9.5E-06 36.9 -0.8 66 6-73 27-94 (103)
17 d1t1da_ d.42.1.2 (A:) Shaker p 69.9 0.42 3.1E-05 33.9 -0.1 61 6-68 26-88 (100)
18 d1nm3a1 c.47.1.1 (A:166-239) C 29.7 11 0.00083 23.9 1.8 17 220-236 13-29 (74)
19 d1egoa_ c.47.1.1 (A:) Glutared 21.4 19 0.0014 23.4 1.7 18 219-236 8-25 (85)
No 1
>d1f81a_ g.53.1.1 (A:) CREB-binding transcriptional adaptor protein CBP (p300) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.91 E-value=1.4e-25 Score=166.15 Aligned_cols=81 Identities=35% Similarity=0.914 Sum_probs=75.8
Q ss_pred HHhHHHHHHHHHHHhhcCCcccCCCcccccCCCCCCCccchhhHHHHHHHHhhccccCCCCCcchHHHHHHHHHHHhcCC
Q 039069 161 YLQLHEAMEALLHICRDGCRTIGPRDKVLKGSQVACNFPACKGLEALVRHFSNCKTRVPGGCVHCKRMWQLLELHSRMCN 240 (293)
Q Consensus 161 y~~L~~~m~lL~h~~~~~c~~~~~~~~~~~~~~~~c~~~~c~~~~~l~~h~~~c~~r~~~gC~~C~~~~~l~~~ha~~c~ 240 (293)
..+|+.+|.+|+|++. |++ ++|.+++|.+||.|++|+++|+.+.+|||++|+++|+||++|++.|+
T Consensus 7 ~~~iq~~l~~L~HA~~--C~~------------~~C~~~~C~~mK~l~~H~~~C~~~~~~~c~~C~~~~~Ll~~H~k~C~ 72 (87)
T d1f81a_ 7 RLSIQRCIQSLVHACQ--CRN------------ANCSLPSCQKMKRVVQHTKGCKRKTNGGCPVCKQLIALCCYHAKHCQ 72 (87)
T ss_dssp HHHHHHHHHHHHHHHH--CCC------------TTCCCHHHHHHHHHHHHHHHCTTHHHHTCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhHcc--CCC------------CCCCCcHHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHHHHHHHcC
Confidence 3468999999999988 986 68999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCChHHHHH
Q 039069 241 EPDLCKVPLCRHFKEK 256 (293)
Q Consensus 241 ~~~~c~vp~c~~~k~~ 256 (293)
+.+ |+||+|++||++
T Consensus 73 ~~~-CpVP~C~~~K~k 87 (87)
T d1f81a_ 73 ENK-CPVPFCLNIKHK 87 (87)
T ss_dssp CSS-CSSTTHHHHHHC
T ss_pred CCC-CCCCcchhhccC
Confidence 975 999999999985
No 2
>d1l8ca_ g.53.1.1 (A:) CREB-binding transcriptional adaptor protein CBP (p300) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.75 E-value=2e-19 Score=135.02 Aligned_cols=87 Identities=24% Similarity=0.616 Sum_probs=74.0
Q ss_pred hHHHHHHHHHHHhhcCCcccCCCcccccCCCCCCCccchhhHHHHHHHHhhccccCCCCCcchHHHHHHHHHHHhcCCCC
Q 039069 163 QLHEAMEALLHICRDGCRTIGPRDKVLKGSQVACNFPACKGLEALVRHFSNCKTRVPGGCVHCKRMWQLLELHSRMCNEP 242 (293)
Q Consensus 163 ~L~~~m~lL~h~~~~~c~~~~~~~~~~~~~~~~c~~~~c~~~~~l~~h~~~c~~r~~~gC~~C~~~~~l~~~ha~~c~~~ 242 (293)
.|+.++.+|+|++. |+... ...+..++|.+++|.+||.|++|+.+|+.+.++||++|+++|+|+ +|++.|.++
T Consensus 8 ~iq~~L~lL~HA~~--C~~~~----~~~~~~~~C~~p~C~~mK~ll~H~~~Ck~~~~c~~~~C~~~~~Ll-~H~k~C~~~ 80 (95)
T d1l8ca_ 8 LIQQQLVLLLHAHK--CQRRE----QANGEVRACSLPHCRTMKNVLNHMTHCQAGKACQVAHCASSRQII-SHWKNCTRH 80 (95)
T ss_dssp HHHHHHHHHHHHHH--HHHHH----HHSCSSCSCCCTTHHHHHHHHHHHHHCCCGGGCCCHHHHHHHHHH-HHHHHCCCS
T ss_pred HHHHHHHHHHHHhh--CCCcc----ccCcccCCCCCchhHHHHHHHHHHHHccCCCCCCCCCCHHHHHHH-HHHHhcCCC
Confidence 46788999999966 87310 012344789999999999999999999999999999999999998 799999998
Q ss_pred CCCCCCCChHHHHHHHH
Q 039069 243 DLCKVPLCRHFKEKMQQ 259 (293)
Q Consensus 243 ~~c~vp~c~~~k~~~~~ 259 (293)
+ |+| |.++|+++++
T Consensus 81 ~-CpV--C~~~k~~~~r 94 (95)
T d1l8ca_ 81 D-CPV--CLPLKNASDK 94 (95)
T ss_dssp C-CTT--HHHHHSCSSC
T ss_pred C-CCC--chHHHhhhhc
Confidence 6 966 9999998765
No 3
>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.58 E-value=5.4e-16 Score=121.55 Aligned_cols=77 Identities=13% Similarity=0.203 Sum_probs=70.9
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHHh
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLEQ 79 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~ 79 (293)
|++||||++||.+++.|+...++.++++++++|+.+|+|+|||++..+ .+++.+++.+|++|+++.|++.|++||.+
T Consensus 45 a~~S~~F~~~f~~~~~e~~~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~--~~~v~~ll~~A~~l~i~~L~~~C~~~L~~ 121 (122)
T d1r29a_ 45 MACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILLDFMYTSRLNLR--EGNIMAVMATAMYLQMEHVVDTCRKFIKA 121 (122)
T ss_dssp HHHCHHHHHHHTSTTTTTCSEEECCTTSCHHHHHHHHHHHHHSCCCCC--TTTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred hhCCHHHHHHhccchhhhcceeeeecccCHHHHHHHHhhhcCCeecCc--hhhHHHHHHHHHHHCcHHHHHHHHHHHHh
Confidence 478999999999999988877777899999999999999999999765 67899999999999999999999999986
No 4
>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=3.8e-15 Score=116.66 Aligned_cols=72 Identities=11% Similarity=0.201 Sum_probs=65.3
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchHHHHHHHHHHh
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPLKRVCEYFLEQ 79 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~ 79 (293)
|++||||++||.++ .++|.++++++++|+.+|+|+|||++..+ .+++.+++.+|++|+++.|++.|++||++
T Consensus 48 aa~S~~F~~lf~~~-----~~~i~~~~v~~~~f~~ll~~~Ytg~i~l~--~~~v~~ll~~A~~l~~~~L~~~C~~~L~~ 119 (121)
T d1buoa_ 48 ACTSKMFEILFHRN-----SQHYTLDFLSPKTFQQILEYAYTATLQAK--AEDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp HHHCHHHHHHTTSC-----CSEEEECSSCHHHHHHHHHHHHHSCCCCC--GGGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cccChhhhhhccCc-----cceeecCCCCHHHHHHHHHheEccccCCc--HHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 57899999999754 35699999999999999999999999766 67899999999999999999999999975
No 5
>d2c9wc1 d.42.1.1 (C:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.86 E-value=0.00068 Score=49.18 Aligned_cols=65 Identities=11% Similarity=0.119 Sum_probs=42.4
Q ss_pred CCCCHHHHHHhcC--CCCcCCcCeEEcCCCCHHHHHHHHhhhhC-----C---CCC-cchHHHHHHHHHHHHhhcC
Q 039069 1 SIASPVLGNILQQ--SKVKNGFKYIKIPGVPHEAVYAFFRFLYS-----S---CFE-EEDLKKFVLHLLVLSHSYL 65 (293)
Q Consensus 1 Aa~S~yF~aMf~~--~~~E~~~~~I~L~~vs~~~~~~~L~flYt-----g---~i~-~~~~~~~v~~LL~lA~~y~ 65 (293)
|-.|+.++.||.+ +..|+....|+|++|+..+++.+++|++. + .++ .+...+.+.+|+.+|++++
T Consensus 20 A~~S~tI~~ml~~~~~~~e~~~~~IpL~nV~s~iL~kViey~~~h~~~~~~~~~~~~fdi~~~~l~eLi~AAnyLd 95 (96)
T d2c9wc1 20 ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLD 95 (96)
T ss_dssp HTTSHHHHHC------------CEEECTTCCHHHHHHHHHHHHHHHHTC----CCCCCCCCHHHHHHHHHHHHHHT
T ss_pred HHHhHHHHHHHhccCccccCCCCeeECCCCCHHHHHHHHHHHHhhccCcCCcCCCCCCcCCHHHHHHHHHHHhhhc
Confidence 3469999999954 34556667899999999999999999952 1 111 1122577889999999875
No 6
>d1hv2a_ d.42.1.1 (A:) Elongin C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.66 E-value=0.0019 Score=46.91 Aligned_cols=65 Identities=14% Similarity=0.144 Sum_probs=49.2
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhCC-----------CCC-cchHHHHHHHHHHHHhhcCc
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYSS-----------CFE-EEDLKKFVLHLLVLSHSYLV 66 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYtg-----------~i~-~~~~~~~v~~LL~lA~~y~v 66 (293)
|-.|+.++.||.+...|+ ...|++++|+..+++.+++|++.- .++ .+...+.+.+|+.+|++++|
T Consensus 23 A~~S~tI~~ml~~~~~e~-~~~Ipl~~V~s~iL~kViey~~~h~~~~~~~~~~~~~~efdvd~~~l~eLi~AAnyLdI 99 (99)
T d1hv2a_ 23 AMISPTLKAMIEGPFRES-KGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPEFEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp HTTCHHHHHHHHSSTTTC-TTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCCCCCCHHHHHHHHHHHHHHCC
T ss_pred HHHhHHHHHHHHccCCCC-cCccccCCCChHHHHHHHHHHHHhhhCcCcccccccCCCCCCCHHHHHHHHHHHhhhCC
Confidence 357999999998766554 457999999999999999998631 110 12226789999999999875
No 7
>d1l8ca_ g.53.1.1 (A:) CREB-binding transcriptional adaptor protein CBP (p300) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.81 E-value=0.037 Score=39.55 Aligned_cols=50 Identities=24% Similarity=0.621 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhhcCCcccCCCcccccCCCCCCCccchhhHHHHHHHHhhccccCCCCCcchHHHH
Q 039069 164 LHEAMEALLHICRDGCRTIGPRDKVLKGSQVACNFPACKGLEALVRHFSNCKTRVPGGCVHCKRMW 229 (293)
Q Consensus 164 L~~~m~lL~h~~~~~c~~~~~~~~~~~~~~~~c~~~~c~~~~~l~~h~~~c~~r~~~gC~~C~~~~ 229 (293)
=...-.++.|. .+|+. | .+|.++.|..++.|+.|...|+. .+|++|..+.
T Consensus 40 C~~mK~ll~H~--~~Ck~-~----------~~c~~~~C~~~~~Ll~H~k~C~~---~~CpVC~~~k 89 (95)
T d1l8ca_ 40 CRTMKNVLNHM--THCQA-G----------KACQVAHCASSRQIISHWKNCTR---HDCPVCLPLK 89 (95)
T ss_dssp HHHHHHHHHHH--HHCCC-G----------GGCCCHHHHHHHHHHHHHHHCCC---SCCTTHHHHH
T ss_pred hHHHHHHHHHH--HHccC-C----------CCCCCCCCHHHHHHHHHHHhcCC---CCCCCchHHH
Confidence 35667788999 55983 1 37999999999999999999955 3699997664
No 8
>d1nexa2 d.42.1.1 (A:4-103) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=88.92 E-value=0.16 Score=34.02 Aligned_cols=42 Identities=14% Similarity=0.150 Sum_probs=29.4
Q ss_pred CCCCHHHHHHhcCCC----CcCCcCeEEcCCCCHHHHHHHHhhhhC
Q 039069 1 SIASPVLGNILQQSK----VKNGFKYIKIPGVPHEAVYAFFRFLYS 42 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~----~E~~~~~I~L~~vs~~~~~~~L~flYt 42 (293)
|..|...++|+.... .+.....|.|++|+..+|+.+++|++.
T Consensus 20 a~~S~tIk~ml~~~~~~~~~~~~~~~Ipl~~V~s~iL~kVieyc~~ 65 (72)
T d1nexa2 20 AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEH 65 (72)
T ss_dssp HTTSHHHHHTC-------------CEEECTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccccccCCCCcccCCCcCHHHHHHHHHHHHH
Confidence 356899999996432 223345799999999999999999875
No 9
>d1fs1b2 d.42.1.1 (B:2-68) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.25 E-value=0.21 Score=32.25 Aligned_cols=38 Identities=13% Similarity=0.266 Sum_probs=30.9
Q ss_pred CCCCHHHHHHhcCCCCcCCcCeEEcCCCCHHHHHHHHhhhhC
Q 039069 1 SIASPVLGNILQQSKVKNGFKYIKIPGVPHEAVYAFFRFLYS 42 (293)
Q Consensus 1 Aa~S~yF~aMf~~~~~E~~~~~I~L~~vs~~~~~~~L~flYt 42 (293)
|..|...+.|+.+. +...|+|++|+..+++.+++|++.
T Consensus 20 a~~S~tI~~ml~~~----~~~~Ipl~~V~s~iL~kVieyc~~ 57 (61)
T d1fs1b2 20 AKQSVTIKTMLEDL----GMDPVPLPNVNAAILKKVIQWCTH 57 (61)
T ss_dssp GGTCHHHHHHHHHT----CCSSEECTTCCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHhcC----CCCCcccCCcCHHHHHHHHHHHHH
Confidence 45689999999542 234699999999999999999874
No 10
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.44 E-value=0.3 Score=30.90 Aligned_cols=37 Identities=8% Similarity=0.023 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhhcCcchHHHHHHHHHHhcCCChHhHH
Q 039069 51 KKFVLHLLVLSHSYLVPPLKRVCEYFLEQGGLTKENVI 88 (293)
Q Consensus 51 ~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~~~l~~~Nvv 88 (293)
.+.+.+|+.+|+.++|+.|.+.|.+.+.. .+...+.-
T Consensus 12 ~~~Lf~Li~AAnyL~I~~Lldl~c~~vA~-~ikgKt~e 48 (55)
T d1fs1b1 12 QGTLFELILAANYLDIKGLLDVTCKTVAN-MIKGKTPE 48 (55)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHTTCCHH
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHH-HHcCCCHH
Confidence 56799999999999999999999999877 45444443
No 11
>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.72 E-value=0.33 Score=35.37 Aligned_cols=32 Identities=16% Similarity=0.289 Sum_probs=29.8
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHHHh
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVVKD 113 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~~n 113 (293)
++.+|+.+++..|..++.+.|.+.|.+|+..|
T Consensus 91 i~~~~v~~ll~~A~~l~i~~L~~~C~~~L~~s 122 (122)
T d1r29a_ 91 LREGNIMAVMATAMYLQMEHVVDTCRKFIKAS 122 (122)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CchhhHHHHHHHHHHHCcHHHHHHHHHHHHhC
Confidence 68999999999999999999999999998754
No 12
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=83.68 E-value=0.073 Score=38.54 Aligned_cols=60 Identities=5% Similarity=-0.060 Sum_probs=41.6
Q ss_pred CCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcchH--HHHHHHHHHh
Q 039069 18 NGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPPL--KRVCEYFLEQ 79 (293)
Q Consensus 18 ~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~L--k~~C~~~L~~ 79 (293)
...+.+-|+ =+|..|+.+|+|+.+|.+.... ......++.=|+.|+|+.+ ..-|.+.+.+
T Consensus 37 ~~~~~~FiD-Rdp~~F~~IL~ylR~G~l~~p~-~~~~~~l~~Ea~fygi~~~~l~~cc~~~~~~ 98 (105)
T d1nn7a_ 37 PETQQYFFD-RDPDIFRHILNFYRTGKLHYPR-HECISAYDEELAFFGLIPEIIGDCCYEEYKD 98 (105)
T ss_dssp GGGTEEEEC-SCTTTHHHHHHHHHHSCBCCCT-TSCHHHHHHHHHHHTCCSCCBCHHHHHHHHH
T ss_pred CCCCcEEEe-CCHHHHHHHHHHHhcCccccCC-CccHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 344566664 5999999999999999886432 2235568888999999863 2445554433
No 13
>d1f81a_ g.53.1.1 (A:) CREB-binding transcriptional adaptor protein CBP (p300) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=83.66 E-value=0.41 Score=33.24 Aligned_cols=49 Identities=27% Similarity=0.573 Sum_probs=38.1
Q ss_pred HHHHHHHHHHhhcCCcccCCCcccccCCCCCCCccchhhHHHHHH-HHhhccccCCCCCcc--hHHHH
Q 039069 165 HEAMEALLHICRDGCRTIGPRDKVLKGSQVACNFPACKGLEALVR-HFSNCKTRVPGGCVH--CKRMW 229 (293)
Q Consensus 165 ~~~m~lL~h~~~~~c~~~~~~~~~~~~~~~~c~~~~c~~~~~l~~-h~~~c~~r~~~gC~~--C~~~~ 229 (293)
...-.++.|. ..|.. + .+|.++.|..+..|+. |...|.. .+|++ |..+.
T Consensus 34 ~~mK~l~~H~--~~C~~-~----------~~~~c~~C~~~~~Ll~~H~k~C~~---~~CpVP~C~~~K 85 (87)
T d1f81a_ 34 QKMKRVVQHT--KGCKR-K----------TNGGCPVCKQLIALCCYHAKHCQE---NKCPVPFCLNIK 85 (87)
T ss_dssp HHHHHHHHHH--HHCTT-H----------HHHTCHHHHHHHHHHHHHHHHCCC---SSCSSTTHHHHH
T ss_pred HHHHHHHHHH--HHcCC-C----------CCCCCCccHHHHHHHHHHHHHcCC---CCCCCCcchhhc
Confidence 4566788898 55872 1 4688999999999997 9999964 36988 98764
No 14
>d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=82.34 E-value=0.56 Score=31.11 Aligned_cols=44 Identities=7% Similarity=0.187 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhhcCcchHHHHHHHHHHhcC---CChHhHHHHHHHhh
Q 039069 51 KKFVLHLLVLSHSYLVPPLKRVCEYFLEQGG---LTKENVIDVLQLAR 95 (293)
Q Consensus 51 ~~~v~~LL~lA~~y~v~~Lk~~C~~~L~~~~---l~~~Nvv~il~lA~ 95 (293)
...+.+|+.+|++++++.|.+.|.+.+.. . .+++-.-.++.+..
T Consensus 13 ~~~L~~li~AAnyL~I~~Ll~l~c~~vA~-~ikgkt~eeiR~~f~I~~ 59 (70)
T d1nexa1 13 QEMLYEIILAANYLNIKPLLDAGCKVVAE-MIRGRSPEEIRRTFNIVN 59 (70)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHTTCCHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHH-HHccCCHHHHHHHhCCCC
Confidence 57799999999999999999999999855 3 45555544444443
No 15
>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.69 E-value=0.71 Score=33.56 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=28.3
Q ss_pred CChHhHHHHHHHhhhCChHHHHHHHHHHHH
Q 039069 82 LTKENVIDVLQLARNCDAPRLSLICVRMVV 111 (293)
Q Consensus 82 l~~~Nvv~il~lA~~~~~~~L~~~c~~~I~ 111 (293)
++.+|+.+++..|..++.+.|.+.|.+|+.
T Consensus 89 l~~~~v~~ll~~A~~l~~~~L~~~C~~~L~ 118 (121)
T d1buoa_ 89 AKAEDLDDLLYAAEILEIEYLEEQCLKMLE 118 (121)
T ss_dssp CCGGGHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 689999999999999999999999999984
No 16
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=79.27 E-value=0.13 Score=36.95 Aligned_cols=66 Identities=5% Similarity=-0.105 Sum_probs=44.5
Q ss_pred HHHHHhcCCCC-cCCcCeEEcCCCCHHHHHHHHhhhhCCCCCcchHHHHHHHHHHHHhhcCcch-HHHHH
Q 039069 6 VLGNILQQSKV-KNGFKYIKIPGVPHEAVYAFFRFLYSSCFEEEDLKKFVLHLLVLSHSYLVPP-LKRVC 73 (293)
Q Consensus 6 yF~aMf~~~~~-E~~~~~I~L~~vs~~~~~~~L~flYtg~i~~~~~~~~v~~LL~lA~~y~v~~-Lk~~C 73 (293)
+|..|+.+... ....+.+-| |=+|..|+.+|+|+.+|.+.... ...+..++.=|+.|+|+. +.+.|
T Consensus 27 ~l~~~~~~~~~~~~~~~~~fi-DRdp~~F~~IL~ylR~g~l~~p~-~~~~~~l~~Ea~yygi~~~~l~~C 94 (103)
T d3kvta_ 27 RLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPT-DVCGPLFEEELEFWGLDSNQVEPC 94 (103)
T ss_dssp TTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCS-SSCHHHHHHHHHHHTCCGGGBCGG
T ss_pred hhHHHHcCCCccCCCCCcEEe-cCCHHHHHHHHHHHccCCccccc-ccCHHHHHHHHHHcCCCHHHHHHH
Confidence 44445544332 233446666 57999999999999999886542 223556888899999975 55555
No 17
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=69.91 E-value=0.42 Score=33.93 Aligned_cols=61 Identities=11% Similarity=-0.019 Sum_probs=40.3
Q ss_pred HHHHHhcCCC-CcCCcCeEEcCCCCHHHHHHHHhhhhCC-CCCcchHHHHHHHHHHHHhhcCcch
Q 039069 6 VLGNILQQSK-VKNGFKYIKIPGVPHEAVYAFFRFLYSS-CFEEEDLKKFVLHLLVLSHSYLVPP 68 (293)
Q Consensus 6 yF~aMf~~~~-~E~~~~~I~L~~vs~~~~~~~L~flYtg-~i~~~~~~~~v~~LL~lA~~y~v~~ 68 (293)
+|.+|+...+ .....+.+-| |=+|..|+.+|+|+-|+ .+.... ...+..++.-|+.|+|+.
T Consensus 26 ~l~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~IL~flR~~~~l~~~~-~~~~~~l~~Ea~y~gi~~ 88 (100)
T d1t1da_ 26 LLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPV-NVPLDVFSEEIKFYELGE 88 (100)
T ss_dssp TTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCT-TSCHHHHHHHHHHTTCCH
T ss_pred hhHHHHhCCCcCCCCCCeEEE-ecCHHHHHHHHHHHhcCCCcCCCC-cccHHHHHHHHHHcCCCH
Confidence 4444553222 2234456777 55999999999999985 443332 233566888899999986
No 18
>d1nm3a1 c.47.1.1 (A:166-239) C-terminal, Grx domain of Hybrid-Prx5 {Haemophilus influenzae [TaxId: 727]}
Probab=29.68 E-value=11 Score=23.87 Aligned_cols=17 Identities=35% Similarity=0.634 Sum_probs=15.1
Q ss_pred CCCcchHHHHHHHHHHH
Q 039069 220 GGCVHCKRMWQLLELHS 236 (293)
Q Consensus 220 ~gC~~C~~~~~l~~~ha 236 (293)
.+|+.|++...||.-|-
T Consensus 13 ~~C~~C~~ak~lL~~~~ 29 (74)
T d1nm3a1 13 PGCPFCAKAKQLLHDKG 29 (74)
T ss_dssp SSCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHcC
Confidence 58999999999998774
No 19
>d1egoa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli [TaxId: 562]}
Probab=21.42 E-value=19 Score=23.40 Aligned_cols=18 Identities=39% Similarity=0.545 Sum_probs=15.1
Q ss_pred CCCCcchHHHHHHHHHHH
Q 039069 219 PGGCVHCKRMWQLLELHS 236 (293)
Q Consensus 219 ~~gC~~C~~~~~l~~~ha 236 (293)
..+|+.|++..+||.=|.
T Consensus 8 k~~Cp~C~~aK~ll~~~~ 25 (85)
T d1egoa_ 8 RSGCPYCVRAKDLAEKLS 25 (85)
T ss_dssp CTTSTHHHHHHHHHHHHH
T ss_pred CCCCHhHHHHHHHHHHcC
Confidence 358999999999997765
Done!