BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039073
(257 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 84/236 (35%), Gaps = 80/236 (33%)
Query: 35 KISYEDLINATEEFHIKYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVK---- 90
++ DL AT F K+ IG G +G VYK L DG VALK+ ++ +
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 91 --SFQNEAHVLS----------------------------------------------TS 102
SF H++S
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTD 162
A L YLH T +I+HRD+ S NILLD N + DFG S + E T
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGI--------SKKGTELGQTH 196
Query: 163 TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
V +G I YF + L TEK DVYSFGVV +VL
Sbjct: 197 LXXVVKGTLGYIDPE----YFIKGRL-------------TEKSDVYSFGVVLFEVL 235
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 84/236 (35%), Gaps = 80/236 (33%)
Query: 35 KISYEDLINATEEFHIKYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVK---- 90
++ DL AT F K+ IG G +G VYK L DG VALK+ ++ +
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 91 --SFQNEAHVLS----------------------------------------------TS 102
SF H++S
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTD 162
A L YLH T +I+HRD+ S NILLD N + DFG S + E T
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGI--------SKKGTELDQTH 196
Query: 163 TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
V +G I YF + L TEK DVYSFGVV +VL
Sbjct: 197 LXXVVKGTLGYIDPE----YFIKGRL-------------TEKSDVYSFGVVLFEVL 235
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 36/129 (27%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL-----HVDSSN 153
++ A L+YLH C I+HRD+ + NILLD EA V DFG A+L+ HV +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 154 RPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVV 213
R G I + A E T +EK DV+ +GV+
Sbjct: 204 R-----------------GTIGHIA--------------PEYLSTGKSSEKTDVFGYGVM 232
Query: 214 ALKVLMGTH 222
L+++ G
Sbjct: 233 LLELITGQR 241
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 26/124 (20%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ A L+YLH C I+HRD+ + NILLD EA V DFG A+L+ +
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXH----- 190
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
V IG I+ E T +EK DV+ +GV+ L+++
Sbjct: 191 ----VXXAVRGXIGHIA-----------------PEYLSTGKSSEKTDVFGYGVMLLELI 229
Query: 219 MGTH 222
G
Sbjct: 230 TGQR 233
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 107 LSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDT-LP 165
L + H + IVHRDI NIL+DSN + DFG A+ AL++T L
Sbjct: 121 LDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK-------------ALSETSLT 167
Query: 166 QVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
Q N ++G + Y F E A E D+YS G+V ++L+G P
Sbjct: 168 QTNHVLGTVQY--------------FSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 89/232 (38%), Gaps = 84/232 (36%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS---- 100
E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 101 -----------------------------------------------TSVAHALSYLHHD 113
T +A+ALSY H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH-- 129
Query: 114 CTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGC 173
+ ++HRDI N+LL SN E +ADFG + +H SS R DTL G
Sbjct: 130 -SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRR-------DTL------CGT 173
Query: 174 ISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
+ Y L P E+ + EK D++S GV+ + L+G P E
Sbjct: 174 LDY-----------LPP---EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 89/234 (38%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R DTL
Sbjct: 127 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-------DTL------C 168
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
G + Y L P E+ + EK D++S GV+ + L+G P E
Sbjct: 169 GTLDY-----------LPP---EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 88/234 (37%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R + +
Sbjct: 152 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-------------DDLC 193
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
G + Y L P E+ + EK D++S GV+ + L+G P E
Sbjct: 194 GTLDY-----------LPP---EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 84/232 (36%), Gaps = 84/232 (36%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS---- 100
E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 101 -----------------------------------------------TSVAHALSYLHHD 113
T +A+ALSY H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH-- 129
Query: 114 CTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGC 173
+ ++HRDI N+LL SN E +ADFG + +H SS R D LP
Sbjct: 130 -SKRVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP------- 179
Query: 174 ISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 180 --------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 85/234 (36%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A + K ++ALK L +++ E + + E + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R D LP
Sbjct: 126 ---SKKVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPP----- 175
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 176 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 88/234 (37%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R ++
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-------------TELC 167
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
G + Y L P E+ + EK D++S GV+ + L+G P E
Sbjct: 168 GTLDY-----------LPP---EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 88/234 (37%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R + +
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-------------DDLC 170
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
G + Y L P E+ + EK D++S GV+ + L+G P E
Sbjct: 171 GTLDY-----------LPP---EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 89/234 (38%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R TD +
Sbjct: 127 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR------TD-------LC 168
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
G + Y L P E+ + EK D++S GV+ + L+G P E
Sbjct: 169 GTLDY-----------LPP---EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R D LP
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPP----- 175
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 176 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 89/234 (38%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R TD +
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR------TD-------LC 167
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
G + Y L P E+ + EK D++S GV+ + L+G P E
Sbjct: 168 GTLDY-----------LPP---EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 22/123 (17%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
+ +A ++YLH +++I+HRD++S+N L+ N VADFG ARL+ VD +P E
Sbjct: 113 FAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLM-VDEKTQP-EG 167
Query: 159 ALTDTLPQVNK---IIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVAL 215
+ P K ++G + A E+ EK DV+SFG+V
Sbjct: 168 LRSLKKPDRKKRYTVVGNPYWMA--------------PEMINGRSYDEKVDVFSFGIVLC 213
Query: 216 KVL 218
+++
Sbjct: 214 EII 216
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R D LP
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPP----- 178
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 179 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 89/234 (38%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R TD +
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR------TD-------LC 167
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
G + Y L P E+ + EK D++S GV+ + L+G P E
Sbjct: 168 GTLDY-----------LPP---EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R D LP
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPP----- 175
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 176 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 89/234 (38%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R TD +
Sbjct: 131 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR------TD-------LC 172
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
G + Y L P E+ + EK D++S GV+ + L+G P E
Sbjct: 173 GTLDY-----------LPP---EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R D LP
Sbjct: 131 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPP----- 180
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 181 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R D LP
Sbjct: 128 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPP----- 177
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 178 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R D LP
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPP----- 175
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 176 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R D LP
Sbjct: 125 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP----- 174
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 175 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 87/234 (37%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R +
Sbjct: 152 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-------------TTLC 193
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
G + Y L P E+ + EK D++S GV+ + L+G P E
Sbjct: 194 GTLDY-----------LPP---EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R D LP
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP----- 178
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 179 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R D LP
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPP----- 178
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 179 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R D LP
Sbjct: 126 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP----- 175
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 176 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R D LP
Sbjct: 131 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP----- 180
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 181 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R D LP
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP----- 178
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 179 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R D LP
Sbjct: 130 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP----- 179
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 180 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R D LP
Sbjct: 131 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP----- 180
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 181 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 87/234 (37%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R +
Sbjct: 143 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-------------TTLC 184
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
G + Y L P E+ + EK D++S GV+ + L+G P E
Sbjct: 185 GTLDY-----------LPP---EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 29/122 (23%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ A+ +++LH + +HRDI S NILLD A ++DFG AR +S + +
Sbjct: 138 IAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR-----ASEKFAQT 189
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
+ ++I+G +Y A A +T K D+YSFGVV L+++
Sbjct: 190 VMX------SRIVGTTAYMAPE---------------ALRGEITPKSDIYSFGVVLLEII 228
Query: 219 MG 220
G
Sbjct: 229 TG 230
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R D LP
Sbjct: 123 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP----- 172
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 173 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 29/122 (23%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ A+ +++LH + +HRDI S NILLD A ++DFG AR +S + +
Sbjct: 138 IAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR-----ASEKFAQT 189
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
+ +I+G +Y A A +T K D+YSFGVV L+++
Sbjct: 190 VMX------XRIVGTTAYMAPE---------------ALRGEITPKSDIYSFGVVLLEII 228
Query: 219 MG 220
G
Sbjct: 229 TG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 29/122 (23%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ A+ +++LH + +HRDI S NILLD A ++DFG AR +S + +
Sbjct: 132 IAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR-----ASEKFAQX 183
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
+ +I+G +Y A A +T K D+YSFGVV L+++
Sbjct: 184 VMX------XRIVGTTAYMAPE---------------ALRGEITPKSDIYSFGVVLLEII 222
Query: 219 MG 220
G
Sbjct: 223 TG 224
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 86/234 (36%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + +H SS R +
Sbjct: 131 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRR-------------TTLC 172
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
G + Y L P +E EK D++S GV+ + L+G P E
Sbjct: 173 GTLDY-----------LPPEXIE---GRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 83/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +ADFG + H SS R D LP
Sbjct: 127 ---SKRVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPP----- 176
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 177 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 29/122 (23%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ A+ +++LH + +HRDI S NILLD A ++DFG AR ++ +
Sbjct: 129 IAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR------ASEKFAQ 179
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
+ + +I+G +Y A A +T K D+YSFGVV L+++
Sbjct: 180 XVXXS-----RIVGTTAYXAPE---------------ALRGEITPKSDIYSFGVVLLEII 219
Query: 219 MG 220
G
Sbjct: 220 TG 221
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 25/117 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+A + YL ++ VHRD+++ NIL++SNL V+DFG +R L D+S+ Y AL
Sbjct: 143 GIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 199
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
+P I Y T DV+S+G+V +V+
Sbjct: 200 GKIPIRWTAPEAIQYRKF----------------------TSASDVWSYGIVMWEVM 234
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +A+FG + +H SS R D LP
Sbjct: 128 ---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPP----- 177
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 178 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 84/234 (35%), Gaps = 84/234 (35%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNEAHVLS-- 100
A E+F I +G G +G+VY A K ++ALK L +++ E + + E + S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 101 -------------------------------------------------TSVAHALSYLH 111
T +A+ALSY H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 112 HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKII 171
+ ++HRDI N+LL S E +A+FG + +H SS R D LP
Sbjct: 129 ---SKRVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPP----- 178
Query: 172 GCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++S GV+ + L+G P E
Sbjct: 179 ----------------------EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTD 162
+A + YL +S VHRD+++ NIL++SNL V+DFG +R L +SS+ Y +L
Sbjct: 125 IASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGG 181
Query: 163 TLP 165
+P
Sbjct: 182 KIP 184
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 93/239 (38%), Gaps = 81/239 (33%)
Query: 35 KISYEDLINATEE-FHIKYCIGTGGYGSVYKA-ELPDGKVVALKKLH-QSETE------- 84
K+ + L EE F + +G G YGSVYKA G++VA+K++ +S+ +
Sbjct: 17 KLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEIS 76
Query: 85 -----DSAFVKSF----------------------------------QNEAHVLSTSVAH 105
DS V + ++E + S
Sbjct: 77 IMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLK 136
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLP 165
L YLH + +HRDI + NILL++ A +ADFG A LTD +
Sbjct: 137 GLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVA-------------GQLTDXMA 180
Query: 166 QVNKIIGCISYYALWFYFQRHNLMPFHV-ELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ N +IG W + P + E+ Y V D++S G+ A+++ G P
Sbjct: 181 KRNXVIGT----PFW-------MAPEVIQEIGYNCV----ADIWSLGITAIEMAEGKPP 224
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 25/125 (20%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ A + YLH SI+HRD+ SNNI L +L + DFG A W
Sbjct: 137 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA--------TEKSRW 185
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
+ + Q++ I LW + P + + + + DVY+FG+V +++
Sbjct: 186 SGSHQFEQLSGSI-------LW-------MAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 231
Query: 219 MGTHP 223
G P
Sbjct: 232 TGQLP 236
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 25/125 (20%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ A + YLH SI+HRD+ SNNI L +L + DFG A W
Sbjct: 129 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA--------TEKSRW 177
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
+ + Q++ I LW + P + + + + DVY+FG+V +++
Sbjct: 178 SGSHQFEQLSGSI-------LW-------MAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 223
Query: 219 MGTHP 223
G P
Sbjct: 224 TGQLP 228
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 25/125 (20%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ A + YLH SI+HRD+ SNNI L +L + DFG A + W
Sbjct: 137 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV--------KSRW 185
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
+ + Q++ I LW + P + + + + DVY+FG+V +++
Sbjct: 186 SGSHQFEQLSGSI-------LW-------MAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 231
Query: 219 MGTHP 223
G P
Sbjct: 232 TGQLP 236
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 25/125 (20%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ A + YLH SI+HRD+ SNNI L +L + DFG A + W
Sbjct: 136 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV--------KSRW 184
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
+ + Q++ I LW + P + + + + DVY+FG+V +++
Sbjct: 185 SGSHQFEQLSGSI-------LW-------MAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 230
Query: 219 MGTHP 223
G P
Sbjct: 231 TGQLP 235
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 25/125 (20%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ A + YLH SI+HRD+ SNNI L +L + DFG A W
Sbjct: 109 IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLA--------TEKSRW 157
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
+ + Q++ I LW + P + + + + DVY+FG+V +++
Sbjct: 158 SGSHQFEQLSGSI-------LW-------MAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203
Query: 219 MGTHP 223
G P
Sbjct: 204 TGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 25/125 (20%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ A + YLH SI+HRD+ SNNI L +L + DFG A + W
Sbjct: 114 IARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV--------KSRW 162
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
+ + Q++ I LW + P + + + + DVY+FG+V +++
Sbjct: 163 SGSHQFEQLSGSI-------LW-------MAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 208
Query: 219 MGTHP 223
G P
Sbjct: 209 TGQLP 213
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 25/125 (20%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ A + YLH SI+HRD+ SNNI L +L + DFG A + W
Sbjct: 114 IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATV--------KSRW 162
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
+ + Q++ I LW + P + + + + DVY+FG+V +++
Sbjct: 163 SGSHQFEQLSGSI-------LW-------MAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 208
Query: 219 MGTHP 223
G P
Sbjct: 209 TGQLP 213
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 25/125 (20%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ A + YLH SI+HRD+ SNNI L +L + DFG A + S + +E
Sbjct: 109 IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE- 164
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
++ G I LW + P + + + + DVY+FG+V +++
Sbjct: 165 ----------QLSGSI----LW-------MAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203
Query: 219 MGTHP 223
G P
Sbjct: 204 TGQLP 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 25/125 (20%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ A + YLH SI+HRD+ SNNI L +L + DFG A + W
Sbjct: 111 IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATV--------KSRW 159
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
+ + Q++ I LW + P + + + + DVY+FG+V +++
Sbjct: 160 SGSHQFEQLSGSI-------LW-------MAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 205
Query: 219 MGTHP 223
G P
Sbjct: 206 TGQLP 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 25/125 (20%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ A + YLH SI+HRD+ SNNI L +L + DFG A + S + +E
Sbjct: 109 IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE- 164
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
++ G I LW + P + + + + DVY+FG+V +++
Sbjct: 165 ----------QLSGSI----LW-------MAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203
Query: 219 MGTHP 223
G P
Sbjct: 204 TGQLP 208
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 26/122 (21%)
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTD 162
+A + YL ++ VHR +++ NIL++SNL V+DFG +R L D+S+ Y AL
Sbjct: 118 IAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGG 174
Query: 163 TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-MGT 221
+P I Y T DV+S+G+V +V+ G
Sbjct: 175 KIPIRWTAPEAIQYRKF----------------------TSASDVWSYGIVMWEVMSYGE 212
Query: 222 HP 223
P
Sbjct: 213 RP 214
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 31/148 (20%)
Query: 76 KKLHQSETEDSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLE 135
K LH ET+ F + ++ A + YLH +I+HRD+ SNNI L L
Sbjct: 120 KHLHVQETKFQMF------QLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLT 170
Query: 136 AFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVEL 195
+ DFG A + W+ + QV + G + LW + P + +
Sbjct: 171 VKIGDFGLATV--------KSRWSGSQ---QVEQPTGSV----LW-------MAPEVIRM 208
Query: 196 AYTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ + DVYS+G+V +++ G P
Sbjct: 209 QDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTL 164
AL++ H + I+HRD+ NIL+ + V DFG AR + DS N ++
Sbjct: 127 QALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAI-ADSGN---------SV 173
Query: 165 PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
Q +IG Y L P E A V + DVYS G V +VL G P
Sbjct: 174 XQTAAVIGTAQY-----------LSP---EQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 94 NEAHVLSTSVAHALSYLHHDC-------TLSIVHRDISSNNILLDSNLEAFVADFGTA 144
NE ++ ++A L+YLH D +I HRDI S N+LL +NL A +ADFG A
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 33/147 (22%)
Query: 78 LHQSETEDSAFVKSFQNEAHV-LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEA 136
LH SET+ F+ + + ++ A + YLH SI+HRD+ SNNI L +
Sbjct: 110 LHASETK-------FEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTV 159
Query: 137 FVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELA 196
+ DFG A W+ + Q++ I LW + P + +
Sbjct: 160 KIGDFGLA--------TEKSRWSGSHQFEQLSGSI-------LW-------MAPEVIRMQ 197
Query: 197 YTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ + + DVY+FG+V +++ G P
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 33/147 (22%)
Query: 78 LHQSETEDSAFVKSFQNEAHV-LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEA 136
LH SET+ F+ + + ++ A + YLH SI+HRD+ SNNI L +
Sbjct: 110 LHASETK-------FEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTV 159
Query: 137 FVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELA 196
+ DFG A W+ + Q++ I LW + P + +
Sbjct: 160 KIGDFGLA--------TEKSRWSGSHQFEQLSGSI-------LW-------MAPEVIRMQ 197
Query: 197 YTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ + + DVY+FG+V +++ G P
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
++E + + AL +LH L I++RDI NILLDSN + DFG ++ D +
Sbjct: 158 EHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET 214
Query: 153 NRPYEWALT 161
R Y++ T
Sbjct: 215 ERAYDFCGT 223
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTD 162
+A + YL +S VHRD+++ NIL++SNL V+DFG +R L +SS+ +L
Sbjct: 127 IASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGG 183
Query: 163 TLP 165
+P
Sbjct: 184 KIP 186
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 33/147 (22%)
Query: 78 LHQSETEDSAFVKSFQNEAHV-LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEA 136
LH SET+ F+ + + ++ A + YLH SI+HRD+ SNNI L +
Sbjct: 98 LHASETK-------FEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTV 147
Query: 137 FVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELA 196
+ DFG A + W+ + Q++ I LW + P + +
Sbjct: 148 KIGDFGLATV--------KSRWSGSHQFEQLSGSI-------LW-------MAPEVIRMQ 185
Query: 197 YTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ + + DVY+FG+V +++ G P
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 94 NEAHVLSTSVAHALSYLHHDCTL--------SIVHRDISSNNILLDSNLEAFVADFGTA 144
NE ++ +++ LSYLH D SI HRD S N+LL S+L A +ADFG A
Sbjct: 112 NELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTL 164
AL++ H + I+HRD+ NI++ + V DFG AR + DS N ++
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGN---------SV 173
Query: 165 PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
Q +IG Y L P E A V + DVYS G V +VL G P
Sbjct: 174 TQTAAVIGTAQY-----------LSP---EQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTL 164
AL++ H + I+HRD+ NI++ + V DFG AR + DS N ++
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGN---------SV 173
Query: 165 PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
Q +IG Y L P E A V + DVYS G V +VL G P
Sbjct: 174 TQTAAVIGTAQY-----------LSP---EQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTL 164
AL++ H + I+HRD+ NI++ + V DFG AR + DS N ++
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGN---------SV 173
Query: 165 PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
Q +IG Y L P E A V + DVYS G V +VL G P
Sbjct: 174 TQTAAVIGTAQY-----------LSP---EQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTL 164
AL++ H + I+HRD+ NI++ + V DFG AR + DS N ++
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGN---------SV 173
Query: 165 PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
Q +IG Y L P E A V + DVYS G V +VL G P
Sbjct: 174 TQTAAVIGTAQY-----------LSP---EQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 138 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 188
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL ++ D+++ G + +++
Sbjct: 189 -----ARANSFVGTAQYVS--------------PELLTEKSASKSSDLWALGCIIYQLVA 229
Query: 220 GTHP 223
G P
Sbjct: 230 GLPP 233
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 27/119 (22%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTL 164
AL++ H + I+HRD+ NI++ + V DFG AR + DS N ++
Sbjct: 144 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGN---------SV 190
Query: 165 PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
Q +IG Y L P E A V + DVYS G V +VL G P
Sbjct: 191 TQTAAVIGTAQY-----------LSP---EQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 115 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 165
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 166 -----ARANXFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 206
Query: 220 GTHP 223
G P
Sbjct: 207 GLPP 210
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 165
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 166 KMCGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 165
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 166 KMCGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 165
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 166 KMCGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 116 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 166
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 167 -----ARANXFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 207
Query: 220 GTHP 223
G P
Sbjct: 208 GLPP 211
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 164
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 165 KMCGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 164
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 165 KMXGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 164
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 165 KMXGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 206
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 114 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 164
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 165 -----ARANXFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 205
Query: 220 GTHP 223
G P
Sbjct: 206 GLPP 209
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 164
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 165 KMCGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 165
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 166 KMXGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 165
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 166 KMCGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 113 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 163
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 164 -----ARANXFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 204
Query: 220 GTHP 223
G P
Sbjct: 205 GLPP 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 164
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 165 KMCGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 206
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 138 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 188
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 189 -----ARANXFVGTAQYVS--------------PELLTEKSAXKSSDLWALGCIIYQLVA 229
Query: 220 GTHP 223
G P
Sbjct: 230 GLPP 233
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 165
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 166 KMCGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 118 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 163
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 164 KMCGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 164
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 165 KMCGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 206
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 164
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 165 KMCGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 206
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 136 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 186
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 187 -----ARANXFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 227
Query: 220 GTHP 223
G P
Sbjct: 228 GLPP 231
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 139 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 189
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 190 -----ARANXFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 230
Query: 220 GTHP 223
G P
Sbjct: 231 GLPP 234
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 138 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 188
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 189 -----ARANXFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 229
Query: 220 GTHP 223
G P
Sbjct: 230 GLPP 233
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 139 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 189
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 190 -----ARANSFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 230
Query: 220 GTHP 223
G P
Sbjct: 231 GLPP 234
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 164
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 165 KMXGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 164
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 165 KMCGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 206
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 165
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 166 KMCGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 207
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 138 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 188
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 189 -----ARANXFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 229
Query: 220 GTHP 223
G P
Sbjct: 230 GLPP 233
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 143 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 193
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 194 -----ARANXFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 234
Query: 220 GTHP 223
G P
Sbjct: 235 GLPP 238
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 138 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 188
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 189 -----ARANXFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 229
Query: 220 GTHP 223
G P
Sbjct: 230 GLPP 233
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 164
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 165 KMXGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 164
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 165 KMCGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 206
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 136 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 186
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 187 -----ARANXFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 227
Query: 220 GTHP 223
G P
Sbjct: 228 GLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 138 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 188
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 189 -----ARANXFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 229
Query: 220 GTHP 223
G P
Sbjct: 230 GLPP 233
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 165
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 166 KMCGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 207
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 136 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 186
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 187 -----ARANAFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 227
Query: 220 GTHP 223
G P
Sbjct: 228 GLPP 231
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 141 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 191
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 192 -----ARANXFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 232
Query: 220 GTHP 223
G P
Sbjct: 233 GLPP 236
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 136 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 186
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 187 -----ARANXFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 227
Query: 220 GTHP 223
G P
Sbjct: 228 GLPP 231
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 48/115 (41%), Gaps = 27/115 (23%)
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
YLH + I HRDI N+LLD ++DFG A + ++ R +N
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER-----------LLN 164
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
K+ G + Y A +R FH E DV+S G+V +L G P
Sbjct: 165 KMCGTLPYVAPELLKRRE----FH---------AEPVDVWSCGIVLTAMLAGELP 206
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + + C L
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + + C L
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 135 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 185
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 186 -----ARANSFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 226
Query: 220 GTHP 223
G P
Sbjct: 227 GLPP 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 120 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 170
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 171 -----ARANXFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 211
Query: 220 GTHP 223
G P
Sbjct: 212 GLPP 215
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 28/124 (22%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+ + AL YLH I+HRD+ NILL+ ++ + DFGTA++L +S
Sbjct: 135 TAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ------ 185
Query: 160 LTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLM 219
+ N +G Y + EL + D+++ G + +++
Sbjct: 186 -----ARANXFVGTAQYVS--------------PELLTEKSACKSSDLWALGCIIYQLVA 226
Query: 220 GTHP 223
G P
Sbjct: 227 GLPP 230
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + + C L
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + + C L
Sbjct: 79 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 74/182 (40%), Gaps = 59/182 (32%)
Query: 41 LINATEEFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAF 88
++ TE +K +G+G +G+VYK +PDG+ VA+K L ++ E D A+
Sbjct: 13 ILKETELRKVK-VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAY 71
Query: 89 VKSFQNEAHV-------LSTSVAHALSYLHHDCTLS------------------------ 117
V + +V L+++V + + C L
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKG 131
Query: 118 --------IVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTD 162
+VHRD+++ N+L+ S + DFG ARLL H D P +W +
Sbjct: 132 MSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 163 TL 164
++
Sbjct: 192 SI 193
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + + C L
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 59/176 (33%)
Query: 41 LINATEEFHIKYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQS-------ETEDSAF 88
++ TE +K +G+G +G+VYK +P+G+ V A+K L+++ E D A
Sbjct: 34 ILKETELKRVK-VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 92
Query: 89 VKSFQNEAHV-------LSTSVAHALSYLHHDCTLS------------------------ 117
+ + + H+ LS ++ + H C L
Sbjct: 93 IMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG 152
Query: 118 --------IVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEW 158
+VHRD+++ N+L+ S + DFG ARLL + D P +W
Sbjct: 153 MMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 208
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + + C L
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
+S +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 116 MSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 162
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + + C L
Sbjct: 76 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
+S +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 116 MSAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 162
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 72/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + + C L
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 195
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/235 (19%), Positives = 82/235 (34%), Gaps = 87/235 (37%)
Query: 47 EFHIKYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVLS------ 100
E ++ IG GG+G VY+A +V H + + S +++ + EA + +
Sbjct: 8 ELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 101 --------------------------------------------TSVAHALSYLHHDCTL 116
+A ++YLH + +
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIV 127
Query: 117 SIVHRDISSNNILLDSNLEAF--------VADFGTARLLHVDSSNRPYEWALTDTLPQVN 168
I+HRD+ S+NIL+ +E + DFG AR EW T +
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----------EWHRTTKMSAA- 175
Query: 169 KIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
G ++ A E+ + ++ DV+S+GV+ ++L G P
Sbjct: 176 ---GAYAWMA--------------PEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 60/150 (40%), Gaps = 49/150 (32%)
Query: 88 FVKSFQNEAHVLS-----TSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
F++ E VL +A + YL ++ VHRD+++ NIL++SNL V+DFG
Sbjct: 136 FLREKDGEFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFG 192
Query: 143 TARLLHVD--------SSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVE 194
+R+L D P W T P+ ISY
Sbjct: 193 LSRVLEDDPEATYTTSGGKIPIRW----TAPE------AISYRKF--------------- 227
Query: 195 LAYTMVVTEKCDVYSFGVVALKVLM-GTHP 223
T DV+SFG+V +V+ G P
Sbjct: 228 -------TSASDVWSFGIVMWEVMTYGERP 250
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 59/176 (33%)
Query: 41 LINATEEFHIKYCIGTGGYGSVYKA-ELPDGKVV----ALKKLHQS-------ETEDSAF 88
++ TE +K +G+G +G+VYK +P+G+ V A+K L+++ E D A
Sbjct: 11 ILKETELKRVK-VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 69
Query: 89 VKSFQNEAHV-------LSTSVAHALSYLHHDCTLS------------------------ 117
+ + + H+ LS ++ + H C L
Sbjct: 70 IMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG 129
Query: 118 --------IVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEW 158
+VHRD+++ N+L+ S + DFG ARLL + D P +W
Sbjct: 130 MMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW 185
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+++ NIL+ NL VADFG ARL+
Sbjct: 119 MAAQIASGMAYVER---MNYVHRDLAAANILVGENLVCKVADFGLARLIE 165
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 37/144 (25%)
Query: 88 FVKSFQNEAHV-----LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
F++S Q V VA + YL VHRD+++ N +LD + VADFG
Sbjct: 113 FIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFG 169
Query: 143 TARLLHVDSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFH---VELAYTM 199
AR D +R YY++ + RH +P +E T
Sbjct: 170 LAR----DILDR--------------------EYYSVQQH--RHARLPVKWTALESLQTY 203
Query: 200 VVTEKCDVYSFGVVALKVLMGTHP 223
T K DV+SFGV+ ++L P
Sbjct: 204 RFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 30/122 (24%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+ L YLH + +HRDI + N+LL + E +ADFG A LT
Sbjct: 127 EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAG-------------QLT 170
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
DT + N +G + A E+ K D++S G+ A+++ G
Sbjct: 171 DTQIKRNXFVGTPFWMA--------------PEVIKQSAYDSKADIWSLGITAIELARGE 216
Query: 222 HP 223
P
Sbjct: 217 PP 218
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 30/122 (24%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+ L YLH + +HRDI + N+LL + E +ADFG A LT
Sbjct: 112 EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAG-------------QLT 155
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
DT + N +G + A E+ K D++S G+ A+++ G
Sbjct: 156 DTQIKRNXFVGTPFWMA--------------PEVIKQSAYDSKADIWSLGITAIELARGE 201
Query: 222 HP 223
P
Sbjct: 202 PP 203
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+A + YL + VHRD+++ NIL++SNL V+DFG AR+L D
Sbjct: 155 GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDD 200
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ + YL +S VHRD+++ NIL++SNL V+DFG +R+L D
Sbjct: 139 GIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 30/122 (24%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+ L YLH + +HRDI + N+LL + E +ADFG A LT
Sbjct: 112 EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAG-------------QLT 155
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
DT + N +G + A E+ K D++S G+ A+++ G
Sbjct: 156 DTQIKRNTFVGTPFWMA--------------PEVIKQSAYDSKADIWSLGITAIELARGE 201
Query: 222 HP 223
P
Sbjct: 202 PP 203
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 32/132 (24%)
Query: 94 NEAHVLST--SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS 151
NE + + SV ALSYLH+ ++HRDI S++ILL S+ ++DFG
Sbjct: 139 NEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFG--------- 186
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFG 211
+ ++ +P+ ++G W + + +P+ E+ D++S G
Sbjct: 187 ----FCAQVSKEVPKRKXLVGT----PYWMAPEVISRLPYGTEV----------DIWSLG 228
Query: 212 VVALKVLMGTHP 223
++ ++++ G P
Sbjct: 229 IMVIEMIDGEPP 240
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 109 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 155
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ + YL +S VHRD+++ NIL++SNL V+DFG +R+L D
Sbjct: 118 GIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 163
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 78/189 (41%), Gaps = 59/189 (31%)
Query: 34 GKISYEDLINATEEFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS------- 81
G ++ ++ TE IK +G+G +G+VYK +P+G+ VA+K+L ++
Sbjct: 1 GAMALLRILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 59
Query: 82 ETEDSAFVKSFQNEAHV-------LSTSVAHALSYLHHDCTL------------------ 116
E D A+V + + HV L+++V + C L
Sbjct: 60 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW 119
Query: 117 --------------SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRP 155
+VHRD+++ N+L+ + + DFG A+LL H + P
Sbjct: 120 CVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 156 YEWALTDTL 164
+W +++
Sbjct: 180 IKWMALESI 188
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 112 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 158
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 110 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 156
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 108 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 154
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ + YL +S VHRD+++ NIL++SNL V+DFG +R+L D
Sbjct: 124 GIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 169
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 119 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + C L
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 119 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 119 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
+ E + S+ A+S+LH + +IVHRD+ NILLD N++ ++DFG
Sbjct: 199 EKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFG 245
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + C L
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 29/133 (21%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR------- 145
++E L + ALSY+H + I+HRD+ NI +D + + DFG A+
Sbjct: 115 RDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 146 LLHVDSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKC 205
+L +DS N P +D L IG Y A L T EK
Sbjct: 172 ILKLDSQNLP---GSSDNLTSA---IGTAMYVATEV-------------LDGTGHYNEKI 212
Query: 206 DVYSFGVVALKVL 218
D+YS G++ +++
Sbjct: 213 DMYSLGIIFFEMI 225
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + C L
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 119 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 119 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 119 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 119 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 29/133 (21%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR------- 145
++E L + ALSY+H + I+HRD+ NI +D + + DFG A+
Sbjct: 115 RDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 146 LLHVDSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKC 205
+L +DS N P +D L IG Y A L T EK
Sbjct: 172 ILKLDSQNLP---GSSDNLTSA---IGTAMYVATEV-------------LDGTGHYNEKI 212
Query: 206 DVYSFGVVALKVL 218
D+YS G++ +++
Sbjct: 213 DMYSLGIIFFEMI 225
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 30/122 (24%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+ L YLH + +HRDI + N+LL + E +ADFG A LT
Sbjct: 132 EILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA-------------GQLT 175
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
DT + N +G + A E+ K D++S G+ A+++ G
Sbjct: 176 DTQIKRNTFVGTPFWMA--------------PEVIKQSAYDSKADIWSLGITAIELARGE 221
Query: 222 HP 223
P
Sbjct: 222 PP 223
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + C L
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + C L
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + C L
Sbjct: 86 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 145
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 146 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 27/137 (19%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTARLLHV 149
+ EA + VA AL +LH T I HRD+ NIL +S + + DF + +
Sbjct: 110 EREASRVVRDVAAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKL 166
Query: 150 DSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVT---EKCD 206
++S P T P++ G Y A P VE+ +T T ++CD
Sbjct: 167 NNSCTPI------TTPELTTPCGSAEYMA-----------PEVVEV-FTDQATFYDKRCD 208
Query: 207 VYSFGVVALKVLMGTHP 223
++S GVV +L G P
Sbjct: 209 LWSLGVVLYIMLSGYPP 225
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + C L
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+A + YL + VHRD+++ NIL++SNL V+DFG +R+L D
Sbjct: 155 GIASGMKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + C L
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + C L
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + C L
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + C L
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + C L
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 95 EAHV-------LSTSVAHALSYLHHDCTLS------------------------------ 117
HV L+++V + C L
Sbjct: 101 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 160
Query: 118 --IVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 161 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 216
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + C L
Sbjct: 82 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 141
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 142 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+A + YL + VHRD+++ NIL++SNL V+DFG +R+L D
Sbjct: 127 IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 171
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+A + YL + VHRD+++ NIL++SNL V+DFG +R+L D
Sbjct: 144 IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 188
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+A + YL + VHRD+++ NIL++SNL V+DFG +R+L D
Sbjct: 127 IASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 171
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
V + YL L VHRD+++ N+L+DSNL V+DFG +R+L D
Sbjct: 159 GVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
V + YL L VHRD+++ N+L+DSNL V+DFG +R+L D
Sbjct: 159 GVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+A + YL + VHRD+++ NIL++SNL V+DFG +R+L D
Sbjct: 155 GIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 61/151 (40%), Gaps = 44/151 (29%)
Query: 76 KKLHQSETEDSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILL---DS 132
KK H SETE S ++ + A+S++H + +VHRD+ N+L +
Sbjct: 99 KKKHFSETEASYIMRK-----------LVSAVSHMH---DVGVVHRDLKPENLLFTDEND 144
Query: 133 NLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFH 192
NLE + DFG ARL D N+P + F H P
Sbjct: 145 NLEIKIIDFGFARLKPPD--NQPLKTPC----------------------FTLHYAAP-- 178
Query: 193 VELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
EL E CD++S GV+ +L G P
Sbjct: 179 -ELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+A + YL + VHRD+++ NIL++SNL V+DFG +R+L D
Sbjct: 155 GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 285 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 285 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+A + YL + VHRD+++ NIL++SNL V+DFG +R+L D
Sbjct: 155 GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+A + YL + VHRD+++ NIL++SNL V+DFG +R+L D
Sbjct: 155 GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+A + YL + VHRD+++ NIL++SNL V+DFG +R+L D
Sbjct: 155 GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 285 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 67 LPDGKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSN 126
LP G + + H++ + S + + S+ + + YL + VHRD+++
Sbjct: 92 LPSGCLRDFLQRHRARLDASRLL--------LYSSQICKGMEYLG---SRRCVHRDLAAR 140
Query: 127 NILLDSNLEAFVADFGTARLLHVD 150
NIL++S +ADFG A+LL +D
Sbjct: 141 NILVESEAHVKIADFGLAKLLPLD 164
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+A + YL + VHRD+++ NIL++SNL V+DFG +R+L D
Sbjct: 155 GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+A + YL + VHRD+++ NIL++SNL V+DFG +R+L D
Sbjct: 153 GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 198
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+ + NIL+ NL VADFG ARL+
Sbjct: 368 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 414
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+A + YL + VHRD+++ NIL++SNL V+DFG R+L D
Sbjct: 155 GIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 30/122 (24%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+A AL +LH +L I++RD+ NILLD + DFG ++ +D + Y +
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFC-- 187
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
G + Y A +R + T+ D +SFGV+ ++L GT
Sbjct: 188 ----------GTVEYMAPEVVNRRGH--------------TQSADWWSFGVLMFEMLTGT 223
Query: 222 HP 223
P
Sbjct: 224 LP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 30/123 (24%)
Query: 101 TSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWAL 160
+A AL +LH +L I++RD+ NILLD + DFG ++ +D + Y +
Sbjct: 134 AELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFC- 188
Query: 161 TDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMG 220
G + Y A +R + T+ D +SFGV+ ++L G
Sbjct: 189 -----------GTVEYMAPEVVNRRGH--------------TQSADWWSFGVLMFEMLTG 223
Query: 221 THP 223
T P
Sbjct: 224 TLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 30/123 (24%)
Query: 101 TSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWAL 160
+A AL +LH +L I++RD+ NILLD + DFG ++ +D + Y +
Sbjct: 133 AELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFC- 187
Query: 161 TDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMG 220
G + Y A +R + T+ D +SFGV+ ++L G
Sbjct: 188 -----------GTVEYMAPEVVNRRGH--------------TQSADWWSFGVLMFEMLTG 222
Query: 221 THP 223
T P
Sbjct: 223 TLP 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 67 LPDGKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSN 126
LP G + + H++ + S + + S+ + + YL + VHRD+++
Sbjct: 96 LPSGCLRDFLQRHRARLDASRLL--------LYSSQICKGMEYLG---SRRCVHRDLAAR 144
Query: 127 NILLDSNLEAFVADFGTARLLHVD 150
NIL++S +ADFG A+LL +D
Sbjct: 145 NILVESEAHVKIADFGLAKLLPLD 168
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 67 LPDGKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSN 126
LP G + + H++ + S + + S+ + + YL + VHRD+++
Sbjct: 108 LPSGCLRDFLQRHRARLDASRLL--------LYSSQICKGMEYLG---SRRCVHRDLAAR 156
Query: 127 NILLDSNLEAFVADFGTARLLHVD 150
NIL++S +ADFG A+LL +D
Sbjct: 157 NILVESEAHVKIADFGLAKLLPLD 180
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP 155
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ P
Sbjct: 117 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAP 170
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 30/121 (24%)
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTD 162
+ L YLH + +HRDI + N+LL + +ADFG A LTD
Sbjct: 129 ILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAG-------------QLTD 172
Query: 163 TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTH 222
T + N +G + A E+ K D++S G+ A+++ G
Sbjct: 173 TQIKRNTFVGTPFWMA--------------PEVIQQSAYDSKADIWSLGITAIELAKGEP 218
Query: 223 P 223
P
Sbjct: 219 P 219
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 67 LPDGKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSN 126
LP G + + H++ + S + + S+ + + YL + VHRD+++
Sbjct: 95 LPSGCLRDFLQRHRARLDASRLL--------LYSSQICKGMEYLG---SRRCVHRDLAAR 143
Query: 127 NILLDSNLEAFVADFGTARLLHVD 150
NIL++S +ADFG A+LL +D
Sbjct: 144 NILVESEAHVKIADFGLAKLLPLD 167
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 83/240 (34%), Gaps = 89/240 (37%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAEL-PDGKVVALKKL----HQSETEDSAFVKSFQNEAHV 98
A E + IG GG+G V+K L D VVA+K L + ETE + FQ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 99 LST--------------------------------------------------SVAHALS 108
+S +A +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLE-----AFVADFGTARLLHVDSSNRPYEWALTDT 163
Y+ + IVHRD+ S NI L S E A VADFGT++ +
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----------------QS 179
Query: 164 LPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ V+ ++G + A P + A TEK D YSF ++ +L G P
Sbjct: 180 VHSVSGLLGNFQWMA-----------PETIG-AEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP 155
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ P
Sbjct: 118 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAP 171
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 71/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF + +G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + + C L
Sbjct: 83 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+A + YL + VHRD+++ NIL++SNL V+DFG +R++ D
Sbjct: 153 GIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 114 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 170
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 171 KFPIKWTAPESL 182
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 95 EAHVLS------TSVAHALSYL------------HHDCTLS------------------- 117
HV TS ++ L H D S
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 118 --IVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 56/158 (35%)
Query: 43 NATEEFHIKYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSET--------EDSAFVKSFQ 93
N + +F +K +G G YG V A P G++VA+KK+ + + +K F+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 94 NEA-------------------------------HVLSTSVA-------------HALSY 109
+E V+ST + A+
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 110 LHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
LH +++HRD+ +N+L++SN + V DFG AR++
Sbjct: 128 LHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 114 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGA 170
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 171 KFPIKWTAPESL 182
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 92 FQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ A + +A AL YLH +L+IV+RD+ NILLDS + DFG +
Sbjct: 137 LEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK 187
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
++ + YL + VHRD+++ NIL++SNL V+DFG +R+L D
Sbjct: 132 GISAGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 177
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 56/158 (35%)
Query: 43 NATEEFHIKYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSET--------EDSAFVKSFQ 93
N + +F +K +G G YG V A P G++VA+KK+ + + +K F+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 94 NEA-------------------------------HVLSTSVA-------------HALSY 109
+E V+ST + A+
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 110 LHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
LH +++HRD+ +N+L++SN + V DFG AR++
Sbjct: 128 LHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 129 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 185
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 186 KFPIKWTAPESL 197
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 116 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 173 KFPIKWTAPESL 184
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 56/158 (35%)
Query: 43 NATEEFHIKYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSET--------EDSAFVKSFQ 93
N + +F +K +G G YG V A P G++VA+KK+ + + +K F+
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 94 NEA-------------------------------HVLSTSVA-------------HALSY 109
+E V+ST + A+
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 110 LHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
LH +++HRD+ +N+L++SN + V DFG AR++
Sbjct: 128 LHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 117 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 173
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 174 KFPIKWTAPESL 185
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 114 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 170
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 171 KFPIKWTAPESL 182
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 116 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 173 KFPIKWTAPESL 184
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 116 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 173 KFPIKWTAPESL 184
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 116 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 173 KFPIKWTAPESL 184
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 178 KFPIKWTAPESL 189
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
++E + A+ Y H IVHRD+ N+LLD NL +ADFG + ++
Sbjct: 107 EDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIM 158
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 135 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGA 191
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 192 KFPIKWTAPESL 203
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 178 KFPIKWTAPESL 189
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 120 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 176
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 177 KFPIKWTAPESL 188
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 177
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 178 KFPIKWTAPESL 189
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
+ EA L + A+ Y H +VHRD+ N+LLD+++ A +ADFG + ++
Sbjct: 110 EMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM 161
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 64/179 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 95 EAHVLS------------------------------------------TSVAHALSYLHH 112
HV +A ++YL
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 113 DCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 137 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 118 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 174
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 175 KFPIKWTAPESL 186
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 116 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 173 KFPIKWTAPESL 184
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 178 KFPIKWTAPESL 189
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
+ EA L + A+ Y H +VHRD+ N+LLD+++ A +ADFG + ++
Sbjct: 110 EMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM 161
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 116 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 172
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 173 KFPIKWTAPESL 184
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 178 KFPIKWTAPESL 189
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HRD+++ N L+ N VADFG +RL+ D+ +
Sbjct: 118 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 174
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 175 KFPIKWTAPESL 186
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++Y+ ++ VHRD+ + NIL+ NL VADFG RL+
Sbjct: 286 MAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLGRLIE 332
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ VA ++Y+ ++ +HRD+ S NIL+ + L +ADFG ARL+
Sbjct: 110 MAAQVAAGMAYIER---MNYIHRDLRSANILVGNGLICKIADFGLARLIE 156
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 29/128 (22%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR------- 145
++E L + ALSY+H + I+HR++ NI +D + + DFG A+
Sbjct: 115 RDEYWRLFRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 146 LLHVDSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKC 205
+L +DS N P +D L IG Y A L T EK
Sbjct: 172 ILKLDSQNLP---GSSDNLTSA---IGTAXYVATEV-------------LDGTGHYNEKI 212
Query: 206 DVYSFGVV 213
D YS G++
Sbjct: 213 DXYSLGII 220
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF +G+G +G+VYK +P+G+ VA+ +L ++ E D A+V + +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + C L
Sbjct: 110 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 169
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 170 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 225
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARL 146
++ VA ++YLH+ IVHRD+ S N+L+D V DFG +RL
Sbjct: 142 MAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL---HVDSSNRPYEW 158
SV ++ SY+H++ +I HRD+ +NIL+D N ++DFG + + + S YE+
Sbjct: 159 SVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEF 216
Query: 159 ALTDTLPQVNKIIGC---ISYYALWFYFQRHNLMPFHVELA 196
+ + G I + Y +N++PF ++++
Sbjct: 217 MPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS 257
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 30/122 (24%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+ L YLH + +HRDI + N+LL + +ADFG A LT
Sbjct: 124 EILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVA-------------GQLT 167
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
DT + N +G + A E+ K D++S G+ A+++ G
Sbjct: 168 DTQIKRNXFVGTPFWMA--------------PEVIKQSAYDFKADIWSLGITAIELAKGE 213
Query: 222 HP 223
P
Sbjct: 214 PP 215
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 37/134 (27%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR------LLHV 149
A + V AL +H ++ ++HRD+ +N+LLD + +ADFGT ++H
Sbjct: 176 AKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHC 232
Query: 150 DSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYS 209
D++ ++ P+V K G YY +CD +S
Sbjct: 233 DTAVGTPDY----ISPEVLKSQGGDGYYG------------------------RECDWWS 264
Query: 210 FGVVALKVLMGTHP 223
GV ++L+G P
Sbjct: 265 VGVFLFEMLVGDTP 278
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 28/118 (23%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLP 165
AL YL + I+HRD+ +NILLD + + DF A +L ++
Sbjct: 127 ALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET-------------- 169
Query: 166 QVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
Q+ + G Y A + R Y+ V D +S GV A ++L G P
Sbjct: 170 QITTMAGTKPYMAPEMFSSRKG-------AGYSFAV----DWWSLGVTAYELLRGRRP 216
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 90 KSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K + EA + A+ Y H IVHRD+ N+LLD +L +ADFG + ++
Sbjct: 99 KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM 153
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 90 KSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K + EA + A+ Y H IVHRD+ N+LLD +L +ADFG + ++
Sbjct: 103 KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM 157
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 90 KSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K + EA + A+ Y H IVHRD+ N+LLD +L +ADFG + ++
Sbjct: 109 KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM 163
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 58 GYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLS 117
G+ ++ ++P G + AL + +D+ F + + L YLH +
Sbjct: 78 GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF------YTKQILEGLKYLHDN---Q 128
Query: 118 IVHRDISSNNILLDSNLEAF-VADFGTA-RLLHVDSSNRPYEWALTDTLPQV 167
IVHRDI +N+L+++ ++DFGT+ RL ++ + L P++
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEI 180
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF + +G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + C L
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 70/176 (39%), Gaps = 58/176 (32%)
Query: 47 EFHIKYCIGTGGYGSVYKA-ELPDGK----VVALKKLHQS-------ETEDSAFVKSFQN 94
EF + +G +G+VYK +P+G+ VA+K+L ++ E D A+V + +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 95 EAHV-------LSTSVAHALSYLHHDCTL------------------------------- 116
HV L+++V + C L
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 117 -SIVHRDISSNNILLDSNLEAFVADFGTARLL-------HVDSSNRPYEWALTDTL 164
+VHRD+++ N+L+ + + DFG A+LL H + P +W +++
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 95 EAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR 154
+A++L T L YLH I+HRD+ NN+LLD N +ADFG A+ S NR
Sbjct: 115 KAYMLMT--LQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK--SFGSPNR 167
Query: 155 PY 156
Y
Sbjct: 168 AY 169
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
+ EA + A+ Y H IVHRD+ + N+LLD+++ +ADFG
Sbjct: 113 EKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFG 159
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
+ EA + A+ Y H IVHRD+ + N+LLD+++ +ADFG
Sbjct: 110 EKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFG 156
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
+ EA + A+ Y H IVHRD+ + N+LLD+++ +ADFG
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFG 158
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
+ EA + A+ Y H IVHRD+ + N+LLD+++ +ADFG
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFG 158
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 37/170 (21%)
Query: 68 PDGKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAHALSYLHHDCTL------SIVHR 121
P+G + LH S+ +V S + L+ SV L+YLH + +I HR
Sbjct: 95 PNGSLXKYLSLHTSD-----WVSSCR-----LAHSVTRGLAYLHTELPRGDHYKPAISHR 144
Query: 122 DISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE---WALTDTLPQVNKIIGCISYYA 178
D++S N+L+ ++ ++DFG + L + RP E A+++ +G I Y A
Sbjct: 145 DLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE--------VGTIRYMA 196
Query: 179 LWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT---HPGE 225
++ V L ++ D+Y+ G++ ++ M PGE
Sbjct: 197 -------PEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 13/60 (21%)
Query: 54 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAHALSYLHHD 113
IG G YG+VYK L D + VA+K V SF N + ++ + + + HD
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVK------------VFSFANRQNFINEKNIYRVPLMEHD 67
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
+ EA + A+ Y H IVHRD+ + N+LLD+++ +ADFG
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFG 158
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 90 KSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K + EA + A+ Y H IVHRD+ N+LLD +L +ADFG + ++
Sbjct: 108 KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
+ EA + A+ Y H IVHRD+ + N+LLD+++ +ADFG
Sbjct: 105 EKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFG 151
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
+ EA + A+ Y H IVHRD+ + N+LLD+++ +ADFG
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFG 158
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
+ EA + A+ Y H IVHRD+ + N+LLD+++ +ADFG
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFG 158
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 41/126 (32%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD------SS 152
+ V ++YL C ++HRD+++ N L+ N V+DFG R + D +
Sbjct: 111 MCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 167
Query: 153 NRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGV 212
P +WA P+V F F R+ + K DV+SFGV
Sbjct: 168 KFPVKWA----SPEV-------------FSFSRY---------------SSKSDVWSFGV 195
Query: 213 VALKVL 218
+ +V
Sbjct: 196 LMWEVF 201
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 41/122 (33%)
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD------SSNRPY 156
V ++YL C ++HRD+++ N L+ N V+DFG R + D + P
Sbjct: 112 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 168
Query: 157 EWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALK 216
+WA P+V F F R+ + K DV+SFGV+ +
Sbjct: 169 KWA----SPEV-------------FSFSRY---------------SSKSDVWSFGVLMWE 196
Query: 217 VL 218
V
Sbjct: 197 VF 198
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 41/122 (33%)
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD------SSNRPY 156
V ++YL C ++HRD+++ N L+ N V+DFG R + D + P
Sbjct: 113 VCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 169
Query: 157 EWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALK 216
+WA P+V F F R+ + K DV+SFGV+ +
Sbjct: 170 KWA----SPEV-------------FSFSRY---------------SSKSDVWSFGVLMWE 197
Query: 217 VL 218
V
Sbjct: 198 VF 199
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 41/126 (32%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD------SS 152
+ V ++YL C ++HRD+++ N L+ N V+DFG R + D +
Sbjct: 128 MCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 184
Query: 153 NRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGV 212
P +WA P+V F F R+ + K DV+SFGV
Sbjct: 185 KFPVKWA----SPEV-------------FSFSRY---------------SSKSDVWSFGV 212
Query: 213 VALKVL 218
+ +V
Sbjct: 213 LMWEVF 218
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 10/57 (17%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
L +LH +C IVHRD+ NIL+ S +ADFG AR+ Y+ ALT
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS-------YQMALT 177
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 58 GYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLS 117
G+ ++ ++P G + AL + +D+ F + + L YLH +
Sbjct: 92 GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGF------YTKQILEGLKYLHDN---Q 142
Query: 118 IVHRDISSNNILLDSNLEAF-VADFGTA-RLLHVDSSNRPYEWALTDTLPQV 167
IVHRDI +N+L+++ ++DFGT+ RL ++ + L P++
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEI 194
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 41/126 (32%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
+ V ++YL C ++HRD+++ N L+ N V+DFG R + D +
Sbjct: 106 MCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 162
Query: 153 NRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGV 212
P +WA P+V F F R+ + K DV+SFGV
Sbjct: 163 KFPVKWA----SPEV-------------FSFSRY---------------SSKSDVWSFGV 190
Query: 213 VALKVL 218
+ +V
Sbjct: 191 LMWEVF 196
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARL 146
L +LH +C IVHRD+ NIL+ S +ADFG AR+
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 42/135 (31%)
Query: 90 KSFQNEAHV-------LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
K Q HV L V+ + YL + VHRD+++ N+LL + A ++DFG
Sbjct: 100 KYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFG 156
Query: 143 TARLLHVDSSNRPYE----WALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYT 198
++ L D + + W + P+ CI+YY
Sbjct: 157 LSKALRADENXYKAQTHGKWPVKWYAPE------CINYYKF------------------- 191
Query: 199 MVVTEKCDVYSFGVV 213
+ K DV+SFGV+
Sbjct: 192 ---SSKSDVWSFGVL 203
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARL 146
L +LH +C IVHRD+ NIL+ S +ADFG AR+
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 54/148 (36%), Gaps = 49/148 (33%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVLS----- 100
E++H IG G YG VYKA+ G+ ALKK+ + E ED + E +L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHS 60
Query: 101 ----------TSVAHALSYLHHDCTLS--------------------------------- 117
T L + H D L
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 118 IVHRDISSNNILLDSNLEAFVADFGTAR 145
++HRD+ N+L++ E +ADFG AR
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARL 146
L +LH +C IVHRD+ NIL+ S +ADFG AR+
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 54/148 (36%), Gaps = 49/148 (33%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVLS----- 100
E++H IG G YG VYKA+ G+ ALKK+ + E ED + E +L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHS 60
Query: 101 ----------TSVAHALSYLHHDCTLS--------------------------------- 117
T L + H D L
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 118 IVHRDISSNNILLDSNLEAFVADFGTAR 145
++HRD+ N+L++ E +ADFG AR
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 54/148 (36%), Gaps = 49/148 (33%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVLS----- 100
E++H IG G YG VYKA+ G+ ALKK+ + E ED + E +L
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKI-RLEKEDEGIPSTTIREISILKELKHS 60
Query: 101 ----------TSVAHALSYLHHDCTLS--------------------------------- 117
T L + H D L
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR 120
Query: 118 IVHRDISSNNILLDSNLEAFVADFGTAR 145
++HRD+ N+L++ E +ADFG AR
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 59/166 (35%), Gaps = 59/166 (35%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKL---HQSETEDSAFV------------ 89
E++ + Y IGTG YG K DGK++ K+L +E E V
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 90 ---------------------------------------KSFQNEAHVLS--TSVAHALS 108
+ + +E VL T + AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 109 YLHH--DCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
H D +++HRD+ N+ LD + DFG AR+L+ D+S
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 59/166 (35%), Gaps = 59/166 (35%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKL---HQSETEDSAFV------------ 89
E++ + Y IGTG YG K DGK++ K+L +E E V
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 90 ---------------------------------------KSFQNEAHVLS--TSVAHALS 108
+ + +E VL T + AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 109 YLHH--DCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
H D +++HRD+ N+ LD + DFG AR+L+ D+S
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS 171
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 48/125 (38%), Gaps = 28/125 (22%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ VA ++YLH+ IVHR++ S N+L+D V DFG +RL
Sbjct: 142 MAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL------------ 188
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
T G + A E+ EK DVYSFGV+ ++
Sbjct: 189 -KASTFLSSKSAAGTPEWMA--------------PEVLRDEPSNEKSDVYSFGVILWELA 233
Query: 219 MGTHP 223
P
Sbjct: 234 TLQQP 238
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 82/240 (34%), Gaps = 89/240 (37%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAEL-PDGKVVALKKL----HQSETEDSAFVKSFQNEAHV 98
A E + IG GG+G V+K L D VVA+K L + ETE + FQ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 99 LST--------------------------------------------------SVAHALS 108
+S +A +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLE-----AFVADFGTARLLHVDSSNRPYEWALTDT 163
Y+ + IVHRD+ S NI L S E A VADFG ++ +
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----------------QS 179
Query: 164 LPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ V+ ++G + A P + A TEK D YSF ++ +L G P
Sbjct: 180 VHSVSGLLGNFQWMA-----------PETIG-AEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
+ EA + A+ Y H IVHRD+ + N+LLD ++ +ADFG
Sbjct: 113 EKEARAKFRQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFG 159
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 30/119 (25%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTL 164
AL +LH + ++HRDI S+NILL + + DFG + + S R
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---------- 173
Query: 165 PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
++++G + A E+ K D++S G++A++++ G P
Sbjct: 174 ---SEMVGTPYWMA--------------PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
+ E+ L + + Y H +VHRD+ N+LLD+++ A +ADFG + ++
Sbjct: 115 EKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM 166
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL------HVDSS 152
++ S+ AL +LH LS++HRD+ +N+L+++ + + DFG + L +D+
Sbjct: 114 IAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAG 171
Query: 153 NRPY 156
+PY
Sbjct: 172 CKPY 175
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 87/227 (38%), Gaps = 81/227 (35%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSV-- 103
+E ++ +G G +G V KA+ K VA+K++ +SE+E AF+ + + V ++
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQI-ESESERKAFIVELRQLSRVNHPNIVK 66
Query: 104 ------------------------------------AHALS----------YLHHDCTLS 117
AHA+S YLH +
Sbjct: 67 LYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 118 IVHRDISSNNILLDSNLEAF-VADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGCISY 176
++HRD+ N+LL + + DFGTA + +N NK G ++
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN--------------NK--GSAAW 170
Query: 177 YALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
A F+ N +EKCDV+S+G++ +V+ P
Sbjct: 171 MAP-EVFEGSNY-------------SEKCDVFSWGIILWEVITRRKP 203
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 42/135 (31%)
Query: 90 KSFQNEAHV-------LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
K Q HV L V+ + YL + VHRD+++ N+LL + A ++DFG
Sbjct: 100 KYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFG 156
Query: 143 TARLLHVDSSNRPYE----WALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYT 198
++ L D + + W + P+ CI+YY
Sbjct: 157 LSKALRADENYYKAQTHGKWPVKWYAPE------CINYYKF------------------- 191
Query: 199 MVVTEKCDVYSFGVV 213
+ K DV+SFGV+
Sbjct: 192 ---SSKSDVWSFGVL 203
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 29/123 (23%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
++ + YL +S+VHRD+++ NIL+ + ++DFG +R ++ + S
Sbjct: 158 QISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS--------- 205
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-MG 220
V + G I W +E + + T + DV+SFGV+ +++ +G
Sbjct: 206 ----XVKRSQGRIP--VKW----------MAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 221 THP 223
+P
Sbjct: 250 GNP 252
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 42/135 (31%)
Query: 90 KSFQNEAHV-------LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
K Q HV L V+ + YL + VHRD+++ N+LL + A ++DFG
Sbjct: 106 KYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFG 162
Query: 143 TARLLHVDSSNRPYE----WALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYT 198
++ L D + + W + P+ CI+YY
Sbjct: 163 LSKALRADENYYKAQTHGKWPVKWYAPE------CINYYKF------------------- 197
Query: 199 MVVTEKCDVYSFGVV 213
+ K DV+SFGV+
Sbjct: 198 ---SSKSDVWSFGVL 209
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 88 FVKSFQNEAHV---LSTSVAHALSYLHHDC-----TLSIVHRDISSNNILLDSNLEAFVA 139
F++ E H+ L+ S A L++LH + +I HRD S N+L+ SNL+ +A
Sbjct: 96 FLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIA 155
Query: 140 DFGTARLLHVDSSN 153
D G A ++H S+
Sbjct: 156 DLGLA-VMHSQGSD 168
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL------HVDSS 152
++ S+ AL +LH LS++HRD+ +N+L+++ + + DFG + L +D+
Sbjct: 158 IAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAG 215
Query: 153 NRPY 156
+PY
Sbjct: 216 CKPY 219
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 49/140 (35%)
Query: 54 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVLS----TSVAHALSY 109
+G G YG VYKA+ G++VALK++ + + ED + E +L ++ +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 110 LHHDCTLSIV--------------------------------------------HRDISS 125
+H + L++V HRD+
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKP 147
Query: 126 NNILLDSNLEAFVADFGTAR 145
N+L++S+ +ADFG AR
Sbjct: 148 QNLLINSDGALKLADFGLAR 167
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 42/135 (31%)
Query: 90 KSFQNEAHV-------LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
K Q HV L V+ + YL + VHRD+++ N+LL + A ++DFG
Sbjct: 94 KYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFG 150
Query: 143 TARLLHVDSSNRPYE----WALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYT 198
++ L D + + W + P+ CI+YY
Sbjct: 151 LSKALRADENYYKAQTHGKWPVKWYAPE------CINYYKF------------------- 185
Query: 199 MVVTEKCDVYSFGVV 213
+ K DV+SFGV+
Sbjct: 186 ---SSKSDVWSFGVL 197
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 42/135 (31%)
Query: 90 KSFQNEAHV-------LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
K Q HV L V+ + YL + VHRD+++ N+LL + A ++DFG
Sbjct: 96 KYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFG 152
Query: 143 TARLLHVDSSNRPYE----WALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYT 198
++ L D + + W + P+ CI+YY
Sbjct: 153 LSKALRADENYYKAQTHGKWPVKWYAPE------CINYYKF------------------- 187
Query: 199 MVVTEKCDVYSFGVV 213
+ K DV+SFGV+
Sbjct: 188 ---SSKSDVWSFGVL 199
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 87/227 (38%), Gaps = 81/227 (35%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSV-- 103
+E ++ +G G +G V KA+ K VA+K++ +SE+E AF+ + + V ++
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQI-ESESERKAFIVELRQLSRVNHPNIVK 65
Query: 104 ------------------------------------AHALS----------YLHHDCTLS 117
AHA+S YLH +
Sbjct: 66 LYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 118 IVHRDISSNNILLDSNLEAF-VADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGCISY 176
++HRD+ N+LL + + DFGTA + +N NK G ++
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN--------------NK--GSAAW 169
Query: 177 YALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
A F+ N +EKCDV+S+G++ +V+ P
Sbjct: 170 MAP-EVFEGSNY-------------SEKCDVFSWGIILWEVITRRKP 202
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 49/140 (35%)
Query: 54 IGTGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVLS----TSVAHALSY 109
+G G YG VYKA+ G++VALK++ + + ED + E +L ++ +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRI-RLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 110 LHHDCTLSIV--------------------------------------------HRDISS 125
+H + L++V HRD+
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKP 147
Query: 126 NNILLDSNLEAFVADFGTAR 145
N+L++S+ +ADFG AR
Sbjct: 148 QNLLINSDGALKLADFGLAR 167
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 29/130 (22%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP 155
A + V AL +H ++ +HRD+ +N+LLD + +ADFGT ++ + R
Sbjct: 175 ARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 156 YEWALTDTL--PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVV 213
T P+V K G YY +CD +S GV
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYG------------------------RECDWWSVGVF 267
Query: 214 ALKVLMGTHP 223
++L+G P
Sbjct: 268 LYEMLVGDTP 277
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
L Y+H + ++HRD+ +N+L++ N E + DFG AR L + Y
Sbjct: 170 RGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 42/135 (31%)
Query: 90 KSFQNEAHV-------LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
K Q HV L V+ + YL + VHRD+++ N+LL + A ++DFG
Sbjct: 116 KYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFG 172
Query: 143 TARLLHVDSSNRPYE----WALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYT 198
++ L D + + W + P+ CI+YY
Sbjct: 173 LSKALRADENYYKAQTHGKWPVKWYAPE------CINYYKF------------------- 207
Query: 199 MVVTEKCDVYSFGVV 213
+ K DV+SFGV+
Sbjct: 208 ---SSKSDVWSFGVL 219
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 42/135 (31%)
Query: 90 KSFQNEAHV-------LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
K Q HV L V+ + YL + VHRD+++ N+LL + A ++DFG
Sbjct: 116 KYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFG 172
Query: 143 TARLLHVDSSNRPYE----WALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYT 198
++ L D + + W + P+ CI+YY
Sbjct: 173 LSKALRADENYYKAQTHGKWPVKWYAPE------CINYYKF------------------- 207
Query: 199 MVVTEKCDVYSFGVV 213
+ K DV+SFGV+
Sbjct: 208 ---SSKSDVWSFGVL 219
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 42/135 (31%)
Query: 90 KSFQNEAHV-------LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
K Q HV L V+ + YL + VHRD+++ N+LL + A ++DFG
Sbjct: 114 KYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFG 170
Query: 143 TARLLHVDSSNRPYE----WALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYT 198
++ L D + + W + P+ CI+YY
Sbjct: 171 LSKALRADENYYKAQTHGKWPVKWYAPE------CINYYKF------------------- 205
Query: 199 MVVTEKCDVYSFGVV 213
+ K DV+SFGV+
Sbjct: 206 ---SSKSDVWSFGVL 217
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 30/119 (25%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTL 164
AL +LH + ++HRDI S+NILL + + DFG + + S R
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---------- 173
Query: 165 PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ ++G + A E+ K D++S G++A++++ G P
Sbjct: 174 ---SXMVGTPYWMA--------------PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 29/130 (22%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP 155
A + V AL +H ++ +HRD+ +N+LLD + +ADFGT ++ + R
Sbjct: 175 ARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 231
Query: 156 YEWALTDTL--PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVV 213
T P+V K G YY +CD +S GV
Sbjct: 232 DTAVGTPDYISPEVLKSQGGDGYYG------------------------RECDWWSVGVF 267
Query: 214 ALKVLMGTHP 223
++L+G P
Sbjct: 268 LYEMLVGDTP 277
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 30/119 (25%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTL 164
AL +LH + ++HRDI S+NILL + + DFG + + S R
Sbjct: 128 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---------- 174
Query: 165 PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ ++G + A E+ K D++S G++A++++ G P
Sbjct: 175 ---SXMVGTPYWMA--------------PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 53/132 (40%), Gaps = 35/132 (26%)
Query: 95 EAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSN---LEAFVADFGTARLLHVDS 151
+A + + + YLH +IVHRDI NILL++ L + DFG + D
Sbjct: 147 DAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD- 202
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFG 211
+ L D L G Y A +++N EKCDV+S G
Sbjct: 203 ------YKLRDRL-------GTAYYIAPEVLKKKYN---------------EKCDVWSCG 234
Query: 212 VVALKVLMGTHP 223
V+ +L G P
Sbjct: 235 VIMYILLCGYPP 246
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 30/119 (25%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTL 164
AL +LH + ++HRDI S+NILL + + DFG + + S R
Sbjct: 127 QALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---------- 173
Query: 165 PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ ++G + A E+ K D++S G++A++++ G P
Sbjct: 174 ---STMVGTPYWMA--------------PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 29/130 (22%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP 155
A + V AL +H ++ +HRD+ +N+LLD + +ADFGT ++ + R
Sbjct: 170 ARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC 226
Query: 156 YEWALTDTL--PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVV 213
T P+V K G YY +CD +S GV
Sbjct: 227 DTAVGTPDYISPEVLKSQGGDGYYG------------------------RECDWWSVGVF 262
Query: 214 ALKVLMGTHP 223
++L+G P
Sbjct: 263 LYEMLVGDTP 272
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 34/130 (26%)
Query: 97 HVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTARLLHVDSSN 153
L + ++ AL YLH + I+HRD+ NI+L + + D G A+ L
Sbjct: 125 RTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL------ 175
Query: 154 RPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVV 213
D + +G + Y A Q+ YT+ V D +SFG +
Sbjct: 176 --------DQGELCTEFVGTLQYLAPELLEQKK----------YTVTV----DYWSFGTL 213
Query: 214 ALKVLMGTHP 223
A + + G P
Sbjct: 214 AFECITGFRP 223
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 26/122 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
VA + YL + VHRD+++ N +LD VADFG AR ++ D
Sbjct: 140 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEXXSVHNKTG 195
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
LP + + AL E T T K DV+SFGV+ +++
Sbjct: 196 AKLP--------VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRG 233
Query: 222 HP 223
P
Sbjct: 234 AP 235
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 42/135 (31%)
Query: 90 KSFQNEAHV-------LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
K Q HV L V+ + YL + VHRD+++ N+LL + A ++DFG
Sbjct: 458 KYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFG 514
Query: 143 TARLLHVDS----SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYT 198
++ L D + +W + P+ CI+YY
Sbjct: 515 LSKALRADENYYKAQTHGKWPVKWYAPE------CINYYKF------------------- 549
Query: 199 MVVTEKCDVYSFGVV 213
+ K DV+SFGV+
Sbjct: 550 ---SSKSDVWSFGVL 561
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
L Y+H + ++HRD+ +N+L++ N E + DFG AR L + Y
Sbjct: 169 RGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 34/130 (26%)
Query: 97 HVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTARLLHVDSSN 153
L + ++ AL YLH + I+HRD+ NI+L + + D G A+ L
Sbjct: 124 RTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL------ 174
Query: 154 RPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVV 213
D + +G + Y A Q+ YT+ V D +SFG +
Sbjct: 175 --------DQGELCTEFVGTLQYLAPELLEQKK----------YTVTV----DYWSFGTL 212
Query: 214 ALKVLMGTHP 223
A + + G P
Sbjct: 213 AFECITGFRP 222
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
S+ VA +++L + + +HRD+++ N+LL + A + DFG AR + DS+
Sbjct: 165 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 215
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
+ EA + A+ Y H IVHRD+ + N+LLD++ +ADFG
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFG 158
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
S+ VA +++L + + +HRD+++ N+LL + A + DFG AR + DS+
Sbjct: 171 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 221
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
S +A ++Y+ + +HRD+ + N+L+ +L +ADFG AR++
Sbjct: 114 FSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIE 160
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 42/135 (31%)
Query: 90 KSFQNEAHV-------LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
K Q HV L V+ + YL + VHRD+++ N+LL + A ++DFG
Sbjct: 459 KYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFG 515
Query: 143 TARLLHVDS----SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYT 198
++ L D + +W + P+ CI+YY
Sbjct: 516 LSKALRADENYYKAQTHGKWPVKWYAPE------CINYYKF------------------- 550
Query: 199 MVVTEKCDVYSFGVV 213
+ K DV+SFGV+
Sbjct: 551 ---SSKSDVWSFGVL 562
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
S +A ++Y+ + +HRD+ + N+L+ +L +ADFG AR++
Sbjct: 115 FSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIE 161
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 26/122 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
VA + YL + VHRD+++ N +LD VADFG AR D ++ Y
Sbjct: 136 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHN 188
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
T ++ + + AL E T T K DV+SFGV+ +++
Sbjct: 189 KTGAKLP-----VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRG 229
Query: 222 HP 223
P
Sbjct: 230 AP 231
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 26/122 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
VA + YL + VHRD+++ N +LD VADFG AR D ++ Y
Sbjct: 139 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHN 191
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
T ++ + + AL E T T K DV+SFGV+ +++
Sbjct: 192 KTGAKLP-----VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRG 232
Query: 222 HP 223
P
Sbjct: 233 AP 234
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + V AL YLH + I++RD+ NILLD N + DFG A+
Sbjct: 108 AKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAK 154
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 26/122 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
VA + YL + VHRD+++ N +LD VADFG AR D ++ Y
Sbjct: 141 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHN 193
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
T ++ + + AL E T T K DV+SFGV+ +++
Sbjct: 194 KTGAKLP-----VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 222 HP 223
P
Sbjct: 235 AP 236
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 26/122 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
VA + YL + VHRD+++ N +LD VADFG AR D ++ Y
Sbjct: 140 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHN 192
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
T ++ + + AL E T T K DV+SFGV+ +++
Sbjct: 193 KTGAKLP-----VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRG 233
Query: 222 HP 223
P
Sbjct: 234 AP 235
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 26/122 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
VA + YL + VHRD+++ N +LD VADFG AR D ++ Y
Sbjct: 133 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHN 185
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
T ++ + + AL E T T K DV+SFGV+ +++
Sbjct: 186 KTGAKLP-----VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRG 226
Query: 222 HP 223
P
Sbjct: 227 AP 228
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HR++++ N L+ N VADFG +RL+ D+ +
Sbjct: 320 MATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 376
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 377 KFPIKWTAPESL 388
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+A + YL +VHR++++ N+LL S + VADFG A LL D Y A
Sbjct: 139 GVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEA 195
Query: 160 LT 161
T
Sbjct: 196 KT 197
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++++ + +HRD+ + NIL+ L +ADFG ARL+
Sbjct: 120 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 166
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++++ + +HRD+ + NIL+ L +ADFG ARL+
Sbjct: 122 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 168
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWA 159
+A + YL +VHR++++ N+LL S + VADFG A LL D Y A
Sbjct: 121 GVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEA 177
Query: 160 LT 161
T
Sbjct: 178 KT 179
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 26/122 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
VA + YL + VHRD+++ N +LD VADFG AR D ++ Y
Sbjct: 138 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHN 190
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
T ++ + + AL E T T K DV+SFGV+ +++
Sbjct: 191 KTGAKLP-----VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRG 231
Query: 222 HP 223
P
Sbjct: 232 AP 233
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 26/122 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
VA + YL + VHRD+++ N +LD VADFG AR D ++ Y
Sbjct: 141 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHN 193
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
T ++ + + AL E T T K DV+SFGV+ +++
Sbjct: 194 KTGAKLP-----VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 222 HP 223
P
Sbjct: 235 AP 236
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HR++++ N L+ N VADFG +RL+ D+ +
Sbjct: 362 MATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 418
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 419 KFPIKWTAPESL 430
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++++ + +HRD+ + NIL+ L +ADFG ARL+
Sbjct: 123 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 169
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 89 VKSF-QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
VK F +NEA + + YLH + I+HRD++ +N+LL N+ +ADFG A L
Sbjct: 106 VKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL------HVDSS 152
++ S+ AL +LH LS++HRD+ +N+L+++ + DFG + L +D+
Sbjct: 141 IAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAG 198
Query: 153 NRPY 156
+PY
Sbjct: 199 CKPY 202
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 25/125 (20%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
+ + LS+LH ++HRDI N+LL N E + DFG +
Sbjct: 134 ICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSA------------- 177
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
L T+ + N IG + A N + Y K D++S G+ A+++
Sbjct: 178 QLDRTVGRRNTFIGTPYWMAPEVIACDEN-----PDATYDF----KSDLWSLGITAIEMA 228
Query: 219 MGTHP 223
G P
Sbjct: 229 EGAPP 233
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 26/122 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
VA + YL + VHRD+++ N +LD VADFG AR D ++ Y
Sbjct: 159 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHN 211
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
T ++ + + AL E T T K DV+SFGV+ +++
Sbjct: 212 KTGAKLP-----VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRG 252
Query: 222 HP 223
P
Sbjct: 253 AP 254
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++++ + +HRD+ + NIL+ L +ADFG ARL+
Sbjct: 114 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 10/73 (13%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------- 151
S+ VA +++L + + +HRD+++ N+LL + A + DFG AR + DS
Sbjct: 163 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 219
Query: 152 SNRPYEWALTDTL 164
+ P +W +++
Sbjct: 220 ARLPVKWMAPESI 232
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
S+ VA +++L + + +HRD+++ N+LL + A + DFG AR + DS+
Sbjct: 169 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 35/132 (26%)
Query: 95 EAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTARLLHVDS 151
+A V+ V ++YLH +IVHRD+ N+LL+S + + DFG +
Sbjct: 137 DAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLS------- 186
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFG 211
A+ + ++ + +G Y A ++++ EKCDV+S G
Sbjct: 187 -------AVFENQKKMKERLGTAYYIAPEVLRKKYD---------------EKCDVWSIG 224
Query: 212 VVALKVLMGTHP 223
V+ +L G P
Sbjct: 225 VILFILLAGYPP 236
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
S+ VA +++L + + +HRD+++ N+LL + A + DFG AR + DS+
Sbjct: 157 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 207
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
++T ++ A+ YL + +HR++++ N L+ N VADFG +RL+ D+ +
Sbjct: 323 MATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 379
Query: 153 NRPYEWALTDTL 164
P +W ++L
Sbjct: 380 KFPIKWTAPESL 391
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++++ + +HRD+ + NIL+ L +ADFG ARL+
Sbjct: 124 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 170
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++++ + +HRD+ + NIL+ L +ADFG ARL+
Sbjct: 119 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 165
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++++ + +HRD+ + NIL+ L +ADFG ARL+
Sbjct: 120 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 166
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++++ + +HRD+ + NIL+ L +ADFG ARL+
Sbjct: 114 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
S+ VA +++L + + +HRD+++ N+LL + A + DFG AR + DS+
Sbjct: 169 FSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN 219
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 26/122 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
VA + YL + VHRD+++ N +LD VADFG AR D ++ Y
Sbjct: 160 QVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHN 212
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
T ++ + + AL E T T K DV+SFGV+ +++
Sbjct: 213 KTGAKLP-----VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRG 253
Query: 222 HP 223
P
Sbjct: 254 AP 255
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++++ + +HRD+ + NIL+ L +ADFG ARL+
Sbjct: 116 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 162
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++++ + +HRD+ + NIL+ L +ADFG ARL+
Sbjct: 115 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 161
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 25/134 (18%)
Query: 95 EAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTARLLHVDS 151
EA V+ VA AL +LH+ I HRD+ NIL + + + DFG + ++
Sbjct: 112 EASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNG 168
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVEL--AYTMVVTEKCDVYS 209
P + P++ G Y A P VE + ++CD++S
Sbjct: 169 DCSPI------STPELLTPCGSAEYMA-----------PEVVEAFSEEASIYDKRCDLWS 211
Query: 210 FGVVALKVLMGTHP 223
GV+ +L G P
Sbjct: 212 LGVILYILLSGYPP 225
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++++ + +HRD+ + NIL+ L +ADFG ARL+
Sbjct: 114 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++++ + +HRD+ + NIL+ L +ADFG ARL+
Sbjct: 114 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 102 SVAHALSYLHHDC-----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR 154
S+A L++LH + +I HRD+ S NIL+ N + +AD G A ++H S+N+
Sbjct: 113 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQ 169
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 102 SVAHALSYLHHDC-----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR 154
S+A L++LH + +I HRD+ S NIL+ N + +AD G A ++H S+N+
Sbjct: 113 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQ 169
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 68/175 (38%), Gaps = 56/175 (32%)
Query: 34 GKISYEDLINAT-EEFHIKYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETE- 84
G +++ED EE H+K+ +G G +GSV L D G+VVA+KKL S E
Sbjct: 1 GAMAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 60
Query: 85 ------DSAFVKSFQNEAHVLSTSVAHA-------------------------------- 106
+ +KS Q++ V V ++
Sbjct: 61 LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI 120
Query: 107 --LSYLHHDC-------TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
L Y C T +HRD+++ NIL+++ + DFG ++L D
Sbjct: 121 KLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 175
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 72/187 (38%), Gaps = 53/187 (28%)
Query: 42 INATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKS 91
+ + E F IG G YG VYKA G+VVALKK+ +ETE + + +K
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 92 FQNEAHVLSTSVAHA-------LSYLHHDC------------------------------ 114
+ V V H +LH D
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 115 --TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKII 171
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LL 180
Query: 172 GCISYYA 178
GC YY+
Sbjct: 181 GC-KYYS 186
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 72/187 (38%), Gaps = 53/187 (28%)
Query: 42 INATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKS 91
+ + E F IG G YG VYKA G+VVALKK+ +ETE + + +K
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 92 FQNEAHVLSTSVAHA-------LSYLHHDC------------------------------ 114
+ V V H +LH D
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 115 --TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKII 171
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LL 179
Query: 172 GCISYYA 178
GC YY+
Sbjct: 180 GC-KYYS 185
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++++ + +HRD+ + NIL+ L +ADFG ARL+
Sbjct: 109 MAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 155
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 32/132 (24%)
Query: 94 NEAHVLSTSVA--HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS 151
NE + + +A ALS LH ++HRDI S++ILL + ++DFG
Sbjct: 245 NEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG--------- 292
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFG 211
+ ++ +P+ ++G W + + +P+ E+ D++S G
Sbjct: 293 ----FCAQVSKEVPRRKXLVGT----PYWMAPELISRLPYGPEV----------DIWSLG 334
Query: 212 VVALKVLMGTHP 223
++ ++++ G P
Sbjct: 335 IMVIEMVDGEPP 346
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 30/130 (23%)
Query: 94 NEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSN 153
+ A + + L +LH + IV+RD+ +NILLD + +ADFG +
Sbjct: 119 SRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK-------- 167
Query: 154 RPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVV 213
E L D + N+ G Y A E+ D +SFGV+
Sbjct: 168 ---ENMLGDA--KTNEFCGTPDYIA--------------PEILLGQKYNHSVDWWSFGVL 208
Query: 214 ALKVLMGTHP 223
++L+G P
Sbjct: 209 LYEMLIGQSP 218
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 102 SVAHALSYLHHDC-----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR 154
S+A L++LH + +I HRD+ S NIL+ N + +AD G A ++H S+N+
Sbjct: 142 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQ 198
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 34/129 (26%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP 155
A+ LST AL+YL + VHRDI++ N+L+ SN + DFG +R + DS+
Sbjct: 120 AYQLST----ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DST--- 168
Query: 156 YEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVAL 215
Y A LP W + N F T DV+ FGV
Sbjct: 169 YYKASKGKLP------------IKWMAPESINFRRF----------TSASDVWMFGVCMW 206
Query: 216 KVLM-GTHP 223
++LM G P
Sbjct: 207 EILMHGVKP 215
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
+ EA + YLH++ ++HRD+ N+ L+ +++ + DFG A + D
Sbjct: 125 EPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE 181
Query: 153 NR 154
+
Sbjct: 182 RK 183
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 41/122 (33%)
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD------SSNRPY 156
V ++YL S++HRD+++ N L+ N V+DFG R + D + P
Sbjct: 112 VCEGMAYLEE---ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 168
Query: 157 EWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALK 216
+WA P+V F F R+ + K DV+SFGV+ +
Sbjct: 169 KWA----SPEV-------------FSFSRY---------------SSKSDVWSFGVLMWE 196
Query: 217 VL 218
V
Sbjct: 197 VF 198
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 29/123 (23%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
++ + YL + +VHRD+++ NIL+ + ++DFG +R ++ + S
Sbjct: 158 QISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS--------- 205
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-MG 220
V + G I W +E + + T + DV+SFGV+ +++ +G
Sbjct: 206 ----XVKRSQGRIP--VKW----------MAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 221 THP 223
+P
Sbjct: 250 GNP 252
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
S +A ++++ + +HRD+ + NIL+ ++L +ADFG AR++
Sbjct: 116 FSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 162
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 63/162 (38%), Gaps = 55/162 (33%)
Query: 46 EEFHIKYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETE-------DSAFVKS 91
EE H+K+ +G G +GSV L D G+VVA+KKL S E + +KS
Sbjct: 11 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 70
Query: 92 FQNEAHVLSTSV--------------------------AHA--------LSYLHHDC--- 114
Q++ V V AHA L Y C
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGM 130
Query: 115 ----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
T +HRD+++ NIL+++ + DFG ++L D
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ VA + YL +HRD+++ NIL+ N A +ADFG +R
Sbjct: 147 FAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 34/129 (26%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP 155
A+ LST AL+YL + VHRDI++ N+L+ SN + DFG +R + DS+
Sbjct: 497 AYQLST----ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DST--- 545
Query: 156 YEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVAL 215
Y A LP W + N F T DV+ FGV
Sbjct: 546 YYKASKGKLP------------IKWMAPESINFRRF----------TSASDVWMFGVCMW 583
Query: 216 KVLM-GTHP 223
++LM G P
Sbjct: 584 EILMHGVKP 592
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 34/129 (26%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP 155
A+ LST AL+YL + VHRDI++ N+L+ SN + DFG +R + DS+
Sbjct: 119 AYQLST----ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DST--- 167
Query: 156 YEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVAL 215
Y A LP W + N F T DV+ FGV
Sbjct: 168 YYKASKGKLP------------IKWMAPESINFRRF----------TSASDVWMFGVCMW 205
Query: 216 KVLM-GTHP 223
++LM G P
Sbjct: 206 EILMHGVKP 214
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 34/129 (26%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP 155
A+ LST AL+YL + VHRDI++ N+L+ SN + DFG +R + DS+
Sbjct: 122 AYQLST----ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DST--- 170
Query: 156 YEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVAL 215
Y A LP W + N F T DV+ FGV
Sbjct: 171 YYKASKGKLP------------IKWMAPESINFRRF----------TSASDVWMFGVCMW 208
Query: 216 KVLM-GTHP 223
++LM G P
Sbjct: 209 EILMHGVKP 217
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 57/165 (34%), Gaps = 59/165 (35%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH---QSETEDSAFV------------ 89
E++ + Y IGTG YG K DGK++ K+L +E E V
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 90 ---------------------------------------KSFQNEAHVLS--TSVAHALS 108
+ + +E VL T + AL
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 109 YLHH--DCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS 151
H D +++HRD+ N+ LD + DFG AR+L+ D
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE 170
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 55/129 (42%), Gaps = 34/129 (26%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP 155
A+ LST AL+YL + VHRDI++ N+L+ SN + DFG +R + DS+
Sbjct: 114 AYQLST----ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DST--- 162
Query: 156 YEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVAL 215
Y A LP W + N F T DV+ FGV
Sbjct: 163 YYKASKGKLP------------IKWMAPESINFRRF----------TSASDVWMFGVCMW 200
Query: 216 KVLM-GTHP 223
++LM G P
Sbjct: 201 EILMHGVKP 209
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ VA + YL +HRD+++ NIL+ N A +ADFG +R
Sbjct: 137 FAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 32/132 (24%)
Query: 94 NEAHVLSTSVA--HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS 151
NE + + +A ALS LH ++HRDI S++ILL + ++DFG
Sbjct: 168 NEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG--------- 215
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFG 211
+ ++ +P+ ++G W + + +P+ E+ D++S G
Sbjct: 216 ----FCAQVSKEVPRRKXLVGT----PYWMAPELISRLPYGPEV----------DIWSLG 257
Query: 212 VVALKVLMGTHP 223
++ ++++ G P
Sbjct: 258 IMVIEMVDGEPP 269
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
+ EA + YLH++ ++HRD+ N+ L+ +++ + DFG A + D
Sbjct: 141 EPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE 197
Query: 153 NR 154
+
Sbjct: 198 RK 199
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 42/155 (27%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS----NRPYE 157
V+ + YL + VHRD+++ N+LL + A ++DFG ++ L D S +
Sbjct: 118 QVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 174
Query: 158 WALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKV 217
W L P+ CI++ + + DV+S+GV +
Sbjct: 175 WPLKWYAPE------CINFRKF----------------------SSRSDVWSYGVTMWEA 206
Query: 218 L-MGTHPGEXXXXXXXXXGPKIMLIDVLDQRLSPP 251
L G P GP++M +R+ P
Sbjct: 207 LSYGQKP------YKKMKGPEVMAFIEQGKRMECP 235
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
+ EA + YLH++ ++HRD+ N+ L+ +++ + DFG A + D
Sbjct: 141 EPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE 197
Query: 153 NR 154
+
Sbjct: 198 RK 199
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 54/129 (41%), Gaps = 34/129 (26%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP 155
A+ LST AL+YL VHRDI++ N+L+ SN + DFG +R + DS+
Sbjct: 117 AYQLST----ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DST--- 165
Query: 156 YEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVAL 215
Y A LP W + N F T DV+ FGV
Sbjct: 166 YYKASKGKLP------------IKWMAPESINFRRF----------TSASDVWMFGVCMW 203
Query: 216 KVLM-GTHP 223
++LM G P
Sbjct: 204 EILMHGVKP 212
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
+ EA + YLH++ ++HRD+ N+ L+ +++ + DFG A + D
Sbjct: 141 EPEARYFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGE 197
Query: 153 NR 154
+
Sbjct: 198 RK 199
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
+ EA + YLH + ++HRD+ N+ L+ +LE + DFG A + D
Sbjct: 114 EPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170
Query: 153 NR 154
+
Sbjct: 171 RK 172
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 54/129 (41%), Gaps = 34/129 (26%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP 155
A+ LST AL+YL VHRDI++ N+L+ SN + DFG +R + DS+
Sbjct: 145 AYQLST----ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DST--- 193
Query: 156 YEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVAL 215
Y A LP W + N F T DV+ FGV
Sbjct: 194 YYKASKGKLP------------IKWMAPESINFRRF----------TSASDVWMFGVCMW 231
Query: 216 KVLM-GTHP 223
++LM G P
Sbjct: 232 EILMHGVKP 240
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
+ EA + YLH + ++HRD+ N+ L+ +LE + DFG A + D
Sbjct: 140 EPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196
Query: 153 NR 154
+
Sbjct: 197 RK 198
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 54/129 (41%), Gaps = 34/129 (26%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP 155
A+ LST AL+YL VHRDI++ N+L+ SN + DFG +R + DS+
Sbjct: 117 AYQLST----ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DST--- 165
Query: 156 YEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVAL 215
Y A LP W + N F T DV+ FGV
Sbjct: 166 YYKASKGKLP------------IKWMAPESINFRRF----------TSASDVWMFGVCMW 203
Query: 216 KVLM-GTHP 223
++LM G P
Sbjct: 204 EILMHGVKP 212
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 47/163 (28%)
Query: 73 VALKKLHQSETEDSA--FVKSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNI 128
V K L E E++ K F H++ S VA + +L + +HRD+++ NI
Sbjct: 173 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNI 229
Query: 129 LLDSNLEAFVADFGTARLLHVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWF 181
LL + DFG AR ++ D + P +W +T+
Sbjct: 230 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI----------------- 272
Query: 182 YFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-MGTHP 223
+ V T + DV+SFGV+ ++ +G P
Sbjct: 273 ---------------FDRVYTIQSDVWSFGVLLWEIFSLGASP 300
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 53/186 (28%)
Query: 43 NATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSF 92
+ E F IG G YG VYKA G+VVALKK+ +ETE + + +K
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 93 QNEAHVLSTSVAHA-------LSYLHHDC------------------------------- 114
+ V V H +LH D
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 115 -TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIG 172
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++G
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLG 178
Query: 173 CISYYA 178
C YY+
Sbjct: 179 C-KYYS 183
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
+ EA + YLH + ++HRD+ N+ L+ +LE + DFG A + D
Sbjct: 116 EPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 172
Query: 153 NR 154
+
Sbjct: 173 RK 174
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 59/153 (38%), Gaps = 31/153 (20%)
Query: 71 KVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILL 130
K + K H+S D + + + E V L YLH + +HRD+ + NILL
Sbjct: 105 KHIVAKGEHKSGVLDESTIATILRE-------VLEGLEYLHKNGQ---IHRDVKAGNILL 154
Query: 131 DSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMP 190
+ +ADFG + L +T NK+ W + P
Sbjct: 155 GEDGSVQIADFGVSAFLATGGD-------ITR-----NKVRKTFVGTPCW-------MAP 195
Query: 191 FHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
+E K D++SFG+ A+++ G P
Sbjct: 196 EVMEQVRGYDF--KADIWSFGITAIELATGAAP 226
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 47/163 (28%)
Query: 73 VALKKLHQSETEDSA--FVKSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNI 128
V K L E E++ K F H++ S VA + +L + +HRD+++ NI
Sbjct: 166 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNI 222
Query: 129 LLDSNLEAFVADFGTARLLHVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWF 181
LL + DFG AR ++ D + P +W +T+
Sbjct: 223 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI----------------- 265
Query: 182 YFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-MGTHP 223
+ V T + DV+SFGV+ ++ +G P
Sbjct: 266 ---------------FDRVYTIQSDVWSFGVLLWEIFSLGASP 293
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 26/122 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
VA + +L + VHRD+++ N +LD VADFG AR D ++ ++
Sbjct: 141 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHN 193
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
T ++ + + AL E T T K DV+SFGV+ +++
Sbjct: 194 KTGAKLP-----VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 222 HP 223
P
Sbjct: 235 AP 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 26/122 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
VA + +L + VHRD+++ N +LD VADFG AR D ++ ++
Sbjct: 141 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHN 193
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
T ++ + + AL E T T K DV+SFGV+ +++
Sbjct: 194 KTGAKLP-----VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 222 HP 223
P
Sbjct: 235 AP 236
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
+ EA + YLH + ++HRD+ N+ L+ +LE + DFG A + D
Sbjct: 116 EPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 172
Query: 153 NR 154
+
Sbjct: 173 RK 174
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 26/122 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
VA + +L + VHRD+++ N +LD VADFG AR D ++ ++
Sbjct: 142 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHN 194
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
T ++ + + AL E T T K DV+SFGV+ +++
Sbjct: 195 KTGAKLP-----VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRG 235
Query: 222 HP 223
P
Sbjct: 236 AP 237
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 53/186 (28%)
Query: 43 NATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSF 92
+ E F IG G YG VYKA G+VVALKK+ +ETE + + +K
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 93 QNEAHVLSTSVAHA-------LSYLHHDC------------------------------- 114
+ V V H +LH D
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 115 -TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIG 172
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++G
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLG 179
Query: 173 CISYYA 178
C YY+
Sbjct: 180 C-KYYS 184
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
+ EA + YLH + ++HRD+ N+ L+ +LE + DFG A + D
Sbjct: 138 EPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 194
Query: 153 NR 154
+
Sbjct: 195 RK 196
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 26/122 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
VA + +L + VHRD+++ N +LD VADFG AR D ++ ++
Sbjct: 139 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHN 191
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
T ++ + + AL E T T K DV+SFGV+ +++
Sbjct: 192 KTGAKLP-----VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRG 232
Query: 222 HP 223
P
Sbjct: 233 AP 234
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 38/170 (22%)
Query: 57 GGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVL---STSVAHALSYLHHD 113
G YG+ Y DG++ + + D K+ + +L S +V L+YL
Sbjct: 130 GFYGAFYS----DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE- 184
Query: 114 CTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGC 173
I+HRD+ +NIL++S E + DFG + L +DS N +G
Sbjct: 185 -KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--------------MANSFVGT 228
Query: 174 ISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
SY + P ++ + V + D++S G+ +++ +G +P
Sbjct: 229 RSY-----------MSPERLQGTHYSV---QSDIWSMGLSLVEMAVGRYP 264
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 53/186 (28%)
Query: 43 NATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSF 92
+ E F IG G YG VYKA G+VVALKK+ +ETE + + +K
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 93 QNEAHVLSTSVAHA-------LSYLHHDC------------------------------- 114
+ V V H +LH D
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 115 -TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIG 172
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++G
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLG 180
Query: 173 CISYYA 178
C YY+
Sbjct: 181 C-KYYS 185
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 47/163 (28%)
Query: 73 VALKKLHQSETEDSA--FVKSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNI 128
V K L E E++ K F H++ S VA + +L + +HRD+++ NI
Sbjct: 175 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNI 231
Query: 129 LLDSNLEAFVADFGTARLLHVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWF 181
LL + DFG AR ++ D + P +W +T+
Sbjct: 232 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI----------------- 274
Query: 182 YFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-MGTHP 223
+ V T + DV+SFGV+ ++ +G P
Sbjct: 275 ---------------FDRVYTIQSDVWSFGVLLWEIFSLGASP 302
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 53/186 (28%)
Query: 43 NATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSF 92
+ E F IG G YG VYKA G+VVALKK+ +ETE + + +K
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 93 QNEAHVLSTSVAHA-------LSYLHHDC------------------------------- 114
+ V V H +LH D
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 115 -TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIG 172
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++G
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI--LLG 178
Query: 173 CISYYA 178
C YY+
Sbjct: 179 C-KYYS 183
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 53/186 (28%)
Query: 43 NATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSF 92
+ E F IG G YG VYKA G+VVALKK+ +ETE + + +K
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 93 QNEAHVLSTSVAHA-------LSYLHHDC------------------------------- 114
+ V V H +LH D
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 115 -TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIG 172
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++G
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLG 179
Query: 173 CISYYA 178
C YY+
Sbjct: 180 C-KYYS 184
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 47/163 (28%)
Query: 73 VALKKLHQSETEDSA--FVKSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNI 128
V K L E E++ K F H++ S VA + +L + +HRD+++ NI
Sbjct: 168 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNI 224
Query: 129 LLDSNLEAFVADFGTARLLHVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWF 181
LL + DFG AR ++ D + P +W +T+
Sbjct: 225 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI----------------- 267
Query: 182 YFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-MGTHP 223
+ V T + DV+SFGV+ ++ +G P
Sbjct: 268 ---------------FDRVYTIQSDVWSFGVLLWEIFSLGASP 295
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 32/132 (24%)
Query: 94 NEAHVLSTSVA--HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS 151
NE + + +A ALS LH ++HRDI S++ILL + ++DFG
Sbjct: 123 NEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG--------- 170
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFG 211
+ ++ +P+ ++G W + + +P+ E+ D++S G
Sbjct: 171 ----FCAQVSKEVPRRKXLVGT----PYWMAPELISRLPYGPEV----------DIWSLG 212
Query: 212 VVALKVLMGTHP 223
++ ++++ G P
Sbjct: 213 IMVIEMVDGEPP 224
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 71/185 (38%), Gaps = 53/185 (28%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQ 93
+ E F IG G YG VYKA G+VVALKK+ +ETE + + +K
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 94 NEAHVLSTSVAHA-------LSYLHHDC-------------------------------- 114
+ V V H +LH D
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 115 TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGC 173
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLGC 178
Query: 174 ISYYA 178
YY+
Sbjct: 179 -KYYS 182
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 35/134 (26%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADFGTARLLHV 149
+++A + V ++Y+H +IVHRD+ NILL+S + + + DFG +
Sbjct: 120 EHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 150 DSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYS 209
++ ++ IG Y A P + Y EKCDV+S
Sbjct: 177 NT--------------KMKDRIGTAYYIA-----------PEVLRGTY----DEKCDVWS 207
Query: 210 FGVVALKVLMGTHP 223
GV+ +L GT P
Sbjct: 208 AGVILYILLSGTPP 221
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 53/186 (28%)
Query: 43 NATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSF 92
+ E F IG G YG VYKA G+VVALKK+ +ETE + + +K
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 93 QNEAHVLSTSVAHA-------LSYLHHDC------------------------------- 114
+ V V H +LH D
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 115 -TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIG 172
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++G
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLG 178
Query: 173 CISYYA 178
C YY+
Sbjct: 179 C-KYYS 183
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 59/154 (38%), Gaps = 33/154 (21%)
Query: 71 KVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILL 130
K + K H+S D + + + E V L YLH + +HRD+ + NILL
Sbjct: 100 KHIVAKGEHKSGVLDESTIATILRE-------VLEGLEYLHKNGQ---IHRDVKAGNILL 149
Query: 131 DSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNK-IIGCISYYALWFYFQRHNLM 189
+ +ADFG + L T +V K +G + A Q
Sbjct: 150 GEDGSVQIADFGVSAFLATGGDI---------TRNKVRKTFVGTPCWMAPEVMEQVR--- 197
Query: 190 PFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
Y K D++SFG+ A+++ G P
Sbjct: 198 ------GYDF----KADIWSFGITAIELATGAAP 221
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 71/185 (38%), Gaps = 53/185 (28%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQ 93
+ E F IG G YG VYKA G+VVALKK+ +ETE + + +K
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 94 NEAHVLSTSVAHA-------LSYLHHDC-------------------------------- 114
+ V V H +LH D
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 115 TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGC 173
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLGC 178
Query: 174 ISYYA 178
YY+
Sbjct: 179 -KYYS 182
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 70/186 (37%), Gaps = 53/186 (28%)
Query: 43 NATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSF 92
+ E F IG G YG VYKA G+VVALKK+ +ETE + + +K
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 93 QNEAHVLSTSVAHA-------LSYLHHDCTL----------------------------- 116
+ V V H +LH D
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 117 ---SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIG 172
++HRD+ N+L+++ +ADFG AR V +E L P++ ++G
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLG 180
Query: 173 CISYYA 178
C YY+
Sbjct: 181 C-KYYS 185
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 26/122 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
VA + +L + VHRD+++ N +LD VADFG AR D ++ ++
Sbjct: 146 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHN 198
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
T ++ + + AL E T T K DV+SFGV+ +++
Sbjct: 199 KTGAKLP-----VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRG 239
Query: 222 HP 223
P
Sbjct: 240 AP 241
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 26/122 (21%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
VA + +L + VHRD+++ N +LD VADFG AR D ++ ++
Sbjct: 142 QVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMLDKEFDSVHN 194
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
T ++ + + AL E T T K DV+SFGV+ +++
Sbjct: 195 KTGAKLP-----VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRG 235
Query: 222 HP 223
P
Sbjct: 236 AP 237
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 70/183 (38%), Gaps = 53/183 (28%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQNE 95
E F IG G YG VYKA G+VVALKK+ +ETE + + +K +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 96 AHVLSTSVAHA-------LSYLHHDC--------------------------------TL 116
V V H +LH D +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGCIS 175
++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI--LLGC-K 179
Query: 176 YYA 178
YY+
Sbjct: 180 YYS 182
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
+ EA + YLH + ++HRD+ N+ L+ +LE + DFG A + D
Sbjct: 120 EPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 176
Query: 153 NR 154
+
Sbjct: 177 RK 178
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 70/183 (38%), Gaps = 53/183 (28%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQNE 95
E F IG G YG VYKA G+VVALKK+ +ETE + + +K +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 96 AHVLSTSVAHA-------LSYLHHDC--------------------------------TL 116
V V H +LH D +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGCIS 175
++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI--LLGC-K 179
Query: 176 YYA 178
YY+
Sbjct: 180 YYS 182
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 71/185 (38%), Gaps = 53/185 (28%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQ 93
+ E F IG G YG VYKA G+VVALKK+ +ETE + + +K
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 94 NEAHVLSTSVAHA-------LSYLHHDC-------------------------------- 114
+ V V H +LH D
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 115 TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGC 173
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLGC 178
Query: 174 ISYYA 178
YY+
Sbjct: 179 -KYYS 182
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 70/183 (38%), Gaps = 53/183 (28%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQNE 95
E F IG G YG VYKA G+VVALKK+ +ETE + + +K +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 96 AHVLSTSVAHA-------LSYLHHDC--------------------------------TL 116
V V H +LH D +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGCIS 175
++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI--LLGC-K 178
Query: 176 YYA 178
YY+
Sbjct: 179 YYS 181
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 71/186 (38%), Gaps = 53/186 (28%)
Query: 43 NATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSF 92
+ E F IG G YG VYKA G+VVALKK+ +ETE + + +K
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 93 QNEAHVLSTSVAHA-------LSYLHHDC------------------------------- 114
+ V V H +LH D
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 115 -TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIG 172
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++G
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLG 179
Query: 173 CISYYA 178
C YY+
Sbjct: 180 C-KYYS 184
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 35/134 (26%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADFGTARLLHV 149
+++A + V ++Y+H +IVHRD+ NILL+S + + + DFG +
Sbjct: 120 EHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 150 DSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYS 209
++ ++ IG Y A P + Y EKCDV+S
Sbjct: 177 NT--------------KMKDRIGTAYYIA-----------PEVLRGTY----DEKCDVWS 207
Query: 210 FGVVALKVLMGTHP 223
GV+ +L GT P
Sbjct: 208 AGVILYILLSGTPP 221
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 29/123 (23%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
++ + YL + +VHRD+++ NIL+ + ++DFG +R ++ + S
Sbjct: 158 QISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS--------- 205
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-MG 220
V + G I W +E + + T + DV+SFGV+ +++ +G
Sbjct: 206 ----YVKRSQGRIP--VKW----------MAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 221 THP 223
+P
Sbjct: 250 GNP 252
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 32/132 (24%)
Query: 94 NEAHVLSTSVA--HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS 151
NE + + +A ALS LH ++HRDI S++ILL + ++DFG
Sbjct: 125 NEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG--------- 172
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFG 211
+ ++ +P+ ++G W + + +P+ E+ D++S G
Sbjct: 173 ----FCAQVSKEVPRRKXLVGT----PYWMAPELISRLPYGPEV----------DIWSLG 214
Query: 212 VVALKVLMGTHP 223
++ ++++ G P
Sbjct: 215 IMVIEMVDGEPP 226
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 70/183 (38%), Gaps = 53/183 (28%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQNE 95
E F IG G YG VYKA G+VVALKK+ +ETE + + +K +
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 96 AHVLSTSVAHA-------LSYLHHDC--------------------------------TL 116
V V H +LH D +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGCIS 175
++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI--LLGC-K 186
Query: 176 YYA 178
YY+
Sbjct: 187 YYS 189
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 26/125 (20%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ + AL++L + L I+HRDI +NILLD + + DFG + L VDS +
Sbjct: 130 ITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQL-VDSIAK---- 182
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
+ GC Y A + P Y + + DV+S G+ ++
Sbjct: 183 ---------TRDAGCRPYMA------PERIDPSASRQGYDV----RSDVWSLGITLYELA 223
Query: 219 MGTHP 223
G P
Sbjct: 224 TGRFP 228
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 56 TGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVL---STSVAHALSYLHH 112
G YG+ Y DG++ + + D K+ + +L S +V L+YL
Sbjct: 94 VGFYGAFYS----DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 113 DCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIG 172
I+HRD+ +NIL++S E + DFG + L D++ N +G
Sbjct: 150 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-------------GQLIDSM--ANSFVG 192
Query: 173 CISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
SY + P ++ + V + D++S G+ +++ +G +P
Sbjct: 193 TRSYMS-----------PERLQGTHYSV---QSDIWSMGLSLVEMAVGRYP 229
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 70/183 (38%), Gaps = 53/183 (28%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQNE 95
E F IG G YG VYKA G+VVALKK+ +ETE + + +K +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 96 AHVLSTSVAHA-------LSYLHHDC--------------------------------TL 116
V V H +LH D +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGCIS 175
++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI--LLGC-K 179
Query: 176 YYA 178
YY+
Sbjct: 180 YYS 182
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 70/183 (38%), Gaps = 53/183 (28%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQNE 95
E F IG G YG VYKA G+VVALKK+ +ETE + + +K +
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 96 AHVLSTSVAHA-------LSYLHHDC--------------------------------TL 116
V V H +LH D +
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGCIS 175
++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI--LLGC-K 183
Query: 176 YYA 178
YY+
Sbjct: 184 YYS 186
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 70/183 (38%), Gaps = 53/183 (28%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQNE 95
E F IG G YG VYKA G+VVALKK+ +ETE + + +K +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 96 AHVLSTSVAHA-------LSYLHHDC--------------------------------TL 116
V V H +LH D +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGCIS 175
++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI--LLGC-K 178
Query: 176 YYA 178
YY+
Sbjct: 179 YYS 181
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 70/183 (38%), Gaps = 53/183 (28%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQNE 95
E F IG G YG VYKA G+VVALKK+ +ETE + + +K +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 96 AHVLSTSVAHA-------LSYLHHDC--------------------------------TL 116
V V H +LH D +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGCIS 175
++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLGC-K 178
Query: 176 YYA 178
YY+
Sbjct: 179 YYS 181
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
S +A ++++ + +HRD+ + NIL+ ++L +ADFG AR++
Sbjct: 289 FSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 335
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 70/183 (38%), Gaps = 53/183 (28%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQNE 95
E F IG G YG VYKA G+VVALKK+ +ETE + + +K +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 96 AHVLSTSVAHA-------LSYLHHDC--------------------------------TL 116
V V H +LH D +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGCIS 175
++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLGC-K 178
Query: 176 YYA 178
YY+
Sbjct: 179 YYS 181
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 30/130 (23%)
Query: 94 NEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSN 153
+ A + + L +LH + IV+RD+ +NILLD + +ADFG +
Sbjct: 118 SRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK-------- 166
Query: 154 RPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVV 213
E L D + N G Y A E+ D +SFGV+
Sbjct: 167 ---ENMLGDA--KTNXFCGTPDYIA--------------PEILLGQKYNHSVDWWSFGVL 207
Query: 214 ALKVLMGTHP 223
++L+G P
Sbjct: 208 LYEMLIGQSP 217
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 71/185 (38%), Gaps = 53/185 (28%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQ 93
+ E F IG G YG VYKA G+VVALKK+ +ETE + + +K
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 94 NEAHVLSTSVAHA-------LSYLHHDC-------------------------------- 114
+ V V H +LH D
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 115 TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGC 173
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLGC 178
Query: 174 ISYYA 178
YY+
Sbjct: 179 -KYYS 182
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 56 TGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVL---STSVAHALSYLHH 112
G YG+ Y DG++ + + D K+ + +L S +V L+YL
Sbjct: 67 VGFYGAFYS----DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 113 DCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIG 172
I+HRD+ +NIL++S E + DFG + L +DS N +G
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--------------MANSFVG 165
Query: 173 CISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
SY + P ++ + V + D++S G+ +++ +G +P
Sbjct: 166 TRSYMS-----------PERLQGTHYSV---QSDIWSMGLSLVEMAVGRYP 202
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 26/121 (21%)
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTD 162
VA + +L + VHRD+++ N +LD VADFG AR D ++ ++
Sbjct: 201 VAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHNK 253
Query: 163 TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTH 222
T ++ + + AL E T T K DV+SFGV+ +++
Sbjct: 254 TGAKLP-----VKWMAL--------------ESLQTQKFTTKSDVWSFGVLLWELMTRGA 294
Query: 223 P 223
P
Sbjct: 295 P 295
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 55/125 (44%), Gaps = 25/125 (20%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
++ ++ AL YL ++HRD+ +NILLD + + DFG + L D +
Sbjct: 129 MTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK----- 181
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
++ GC +Y A +R + P + Y + + DV+S G+ +++
Sbjct: 182 ---------DRSAGCAAYMAP----ERID-PPDPTKPDYDI----RADVWSLGISLVELA 223
Query: 219 MGTHP 223
G P
Sbjct: 224 TGQFP 228
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 56 TGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVL---STSVAHALSYLHH 112
G YG+ Y DG++ + + D K+ + +L S +V L+YL
Sbjct: 67 VGFYGAFYS----DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 113 DCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIG 172
I+HRD+ +NIL++S E + DFG + L +DS N +G
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--------------MANSFVG 165
Query: 173 CISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
SY + P ++ + V + D++S G+ +++ +G +P
Sbjct: 166 TRSYMS-----------PERLQGTHYSV---QSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 56 TGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVL---STSVAHALSYLHH 112
G YG+ Y DG++ + + D K+ + +L S +V L+YL
Sbjct: 67 VGFYGAFYS----DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 113 DCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIG 172
I+HRD+ +NIL++S E + DFG + L +DS N +G
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--------------MANSFVG 165
Query: 173 CISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
SY + P ++ + V + D++S G+ +++ +G +P
Sbjct: 166 TRSYMS-----------PERLQGTHYSV---QSDIWSMGLSLVEMAVGRYP 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 71/185 (38%), Gaps = 53/185 (28%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQ 93
+ E F IG G YG VYKA G+VVALKK+ +ETE + + +K
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 94 NEAHVLSTSVAHA-------LSYLHHDC-------------------------------- 114
+ V V H +LH D
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 115 TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGC 173
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 121 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLGC 178
Query: 174 ISYYA 178
YY+
Sbjct: 179 -KYYS 182
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 55/162 (33%)
Query: 46 EEFHIKYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETE-------DSAFVKS 91
EE H+K+ +G G +GSV L D G+VVA+KKL S E + +KS
Sbjct: 7 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 66
Query: 92 FQNEAHVLSTSVAHA----------------------------------LSYLHHDC--- 114
Q++ V V ++ L Y C
Sbjct: 67 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 126
Query: 115 ----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
T +HRD+++ NIL+++ + DFG ++L D
Sbjct: 127 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 168
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 56 TGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVL---STSVAHALSYLHH 112
G YG+ Y DG++ + + D K+ + +L S +V L+YL
Sbjct: 67 VGFYGAFYS----DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 113 DCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIG 172
I+HRD+ +NIL++S E + DFG + L +DS N +G
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--------------MANSFVG 165
Query: 173 CISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
SY + P ++ + V + D++S G+ +++ +G +P
Sbjct: 166 TRSYMS-----------PERLQGTHYSV---QSDIWSMGLSLVEMAVGRYP 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 70/183 (38%), Gaps = 53/183 (28%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQNE 95
E F IG G YG VYKA G+VVALKK+ +ETE + + +K +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 96 AHVLSTSVAHA-------LSYLHHDC--------------------------------TL 116
V V H +LH D +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGCIS 175
++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLGC-K 180
Query: 176 YYA 178
YY+
Sbjct: 181 YYS 183
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 35/134 (26%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADFGTARLLHV 149
+++A + V ++Y+H +IVHRD+ NILL+S + + + DFG +
Sbjct: 120 EHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 150 DSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYS 209
++ ++ IG Y A P + Y EKCDV+S
Sbjct: 177 NT--------------KMKDRIGTAYYIA-----------PEVLRGTY----DEKCDVWS 207
Query: 210 FGVVALKVLMGTHP 223
GV+ +L GT P
Sbjct: 208 AGVILYILLSGTPP 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 32/132 (24%)
Query: 94 NEAHVLSTSVA--HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS 151
NE + + +A ALS LH ++HRDI S++ILL + ++DFG
Sbjct: 114 NEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG--------- 161
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFG 211
+ ++ +P+ ++G W + + +P+ E+ D++S G
Sbjct: 162 ----FCAQVSKEVPRRKXLVGT----PYWMAPELISRLPYGPEV----------DIWSLG 203
Query: 212 VVALKVLMGTHP 223
++ ++++ G P
Sbjct: 204 IMVIEMVDGEPP 215
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 81/240 (33%), Gaps = 89/240 (37%)
Query: 44 ATEEFHIKYCIGTGGYGSVYKAEL-PDGKVVALKKL----HQSETEDSAFVKSFQNEAHV 98
A E + IG GG+G V+K L D VVA+K L + ETE + FQ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 99 LST--------------------------------------------------SVAHALS 108
+S +A +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 109 YLHHDCTLSIVHRDISSNNILLDSNLE-----AFVADFGTARLLHVDSSNRPYEWALTDT 163
Y+ + IVHRD+ S NI L S E A VADF ++ +
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----------------QS 179
Query: 164 LPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ V+ ++G + A P + A TEK D YSF ++ +L G P
Sbjct: 180 VHSVSGLLGNFQWMA-----------PETIG-AEEESYTEKADTYSFAMILYTILTGEGP 227
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 55/162 (33%)
Query: 46 EEFHIKYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETE-------DSAFVKS 91
EE H+K+ +G G +GSV L D G+VVA+KKL S E + +KS
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 67
Query: 92 FQNEAHVLSTSVAHA----------------------------------LSYLHHDC--- 114
Q++ V V ++ L Y C
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 115 ----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
T +HRD+++ NIL+++ + DFG ++L D
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 75/227 (33%), Gaps = 78/227 (34%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNE----AHVLS 100
++F I +G G +G+VY A K ++ALK L +S+ E + E +H+
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 101 TSVAHALSYLH-------------------------------------------HDC-TL 116
++ +Y H H C
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGCISY 176
++HRDI N+L+ E +ADFG + +H S R D LP
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPP---------- 182
Query: 177 YALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
E+ EK D++ GV+ + L+G P
Sbjct: 183 -----------------EMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 31/125 (24%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
+S +V L+YL I+HRD+ +NIL++S E + DFG + L +DS
Sbjct: 119 VSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS------- 168
Query: 159 ALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL 218
N +G SY A P ++ + V + D++S G+ +++
Sbjct: 169 -------MANSFVGTRSYMA-----------PERLQGTHYSV---QSDIWSMGLSLVELA 207
Query: 219 MGTHP 223
+G +P
Sbjct: 208 VGRYP 212
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR-LLHVDSSNRPYEWAL 160
VA + YL + +HRD+++ N+L+ + +ADFG AR + H+D Y+
Sbjct: 150 QVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY----YKKTT 202
Query: 161 TDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
LP + + A F R + T + DV+SFGV+ ++ +
Sbjct: 203 NGRLP--------VKWMAPEALFDR--------------IYTHQSDVWSFGVLLWEIFTL 240
Query: 220 GTHP 223
G P
Sbjct: 241 GGSP 244
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 56 TGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVL---STSVAHALSYLHH 112
G YG+ Y DG++ + + D K+ + +L S +V L+YL
Sbjct: 67 VGFYGAFYS----DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 113 DCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIG 172
I+HRD+ +NIL++S E + DFG + L +DS N +G
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--------------MANSFVG 165
Query: 173 CISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
SY + P ++ + V + D++S G+ +++ +G +P
Sbjct: 166 TRSYMS-----------PERLQGTHYSV---QSDIWSMGLSLVEMAVGRYP 202
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 75/227 (33%), Gaps = 78/227 (34%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNE----AHVLS 100
++F I +G G +G+VY A K ++ALK L +S+ E + E +H+
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 101 TSVAHALSYLH-------------------------------------------HDC-TL 116
++ +Y H H C
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGCISY 176
++HRDI N+L+ E +ADFG + +H S R D LP
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPP---------- 181
Query: 177 YALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
E+ EK D++ GV+ + L+G P
Sbjct: 182 -----------------EMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 55/162 (33%)
Query: 46 EEFHIKYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETE-------DSAFVKS 91
EE H+K+ +G G +GSV L D G+VVA+KKL S E + +KS
Sbjct: 12 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 71
Query: 92 FQNEAHVLSTSVAHA----------------------------------LSYLHHDC--- 114
Q++ V V ++ L Y C
Sbjct: 72 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 131
Query: 115 ----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
T +HRD+++ NIL+++ + DFG ++L D
Sbjct: 132 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 173
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR-LLHVDSSNRPYEWAL 160
VA + YL + +HRD+++ N+L+ + +ADFG AR + H+D Y+
Sbjct: 158 QVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY----YKKTT 210
Query: 161 TDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
LP + + A F R + T + DV+SFGV+ ++ +
Sbjct: 211 NGRLP--------VKWMAPEALFDR--------------IYTHQSDVWSFGVLLWEIFTL 248
Query: 220 GTHP 223
G P
Sbjct: 249 GGSP 252
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 56 TGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVL---STSVAHALSYLHH 112
G YG+ Y DG++ + + D K+ + +L S +V L+YL
Sbjct: 86 VGFYGAFYS----DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 113 DCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIG 172
I+HRD+ +NIL++S E + DFG + L D++ N +G
Sbjct: 142 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-------------GQLIDSM--ANSFVG 184
Query: 173 CISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
SY + P ++ + V + D++S G+ +++ +G +P
Sbjct: 185 TRSYMS-----------PERLQGTHYSV---QSDIWSMGLSLVEMAVGRYP 221
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
S +A ++++ + +HRD+ + NIL+ ++L +ADFG AR+ + P +W
Sbjct: 283 FSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARV----GAKFPIKW 335
Query: 159 ALTDTL 164
+ +
Sbjct: 336 TAPEAI 341
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR-LLHVDSSNRPYEWAL 160
VA + YL + +HRD+++ N+L+ + +ADFG AR + H+D Y+
Sbjct: 158 QVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY----YKKTT 210
Query: 161 TDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
LP + + A F R + T + DV+SFGV+ ++ +
Sbjct: 211 NGRLP--------VKWMAPEALFDR--------------IYTHQSDVWSFGVLLWEIFTL 248
Query: 220 GTHP 223
G P
Sbjct: 249 GGSP 252
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 55/162 (33%)
Query: 46 EEFHIKYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETE-------DSAFVKS 91
EE H+K+ +G G +GSV L D G+VVA+KKL S E + +KS
Sbjct: 6 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 65
Query: 92 FQNEAHVLSTSVAHA----------------------------------LSYLHHDC--- 114
Q++ V V ++ L Y C
Sbjct: 66 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 125
Query: 115 ----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
T +HRD+++ NIL+++ + DFG ++L D
Sbjct: 126 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 167
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 30/119 (25%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTL 164
AL +LH + ++HR+I S+NILL + + DFG + + S R
Sbjct: 128 QALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR---------- 174
Query: 165 PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ ++G + A E+ K D++S G++A++++ G P
Sbjct: 175 ---STMVGTPYWMA--------------PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 55/162 (33%)
Query: 46 EEFHIKYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETE-------DSAFVKS 91
EE H+K+ +G G +GSV L D G+VVA+KKL S E + +KS
Sbjct: 11 EERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 70
Query: 92 FQNEAHVLSTSVAHA----------------------------------LSYLHHDC--- 114
Q++ V V ++ L Y C
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGM 130
Query: 115 ----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
T +HRD+++ NIL+++ + DFG ++L D
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 55/162 (33%)
Query: 46 EEFHIKYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETE-------DSAFVKS 91
EE H+K+ +G G +GSV L D G+VVA+KKL S E + +KS
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 67
Query: 92 FQNEAHVLSTSVAHA----------------------------------LSYLHHDC--- 114
Q++ V V ++ L Y C
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 115 ----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
T +HRD+++ NIL+++ + DFG ++L D
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR-LLHVDSSNRPYEWAL 160
VA + YL + +HRD+++ N+L+ + +ADFG AR + H+D Y+
Sbjct: 147 QVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY----YKKTT 199
Query: 161 TDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
LP + + A F R + T + DV+SFGV+ ++ +
Sbjct: 200 NGRLP--------VKWMAPEALFDR--------------IYTHQSDVWSFGVLLWEIFTL 237
Query: 220 GTHP 223
G P
Sbjct: 238 GGSP 241
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 55/162 (33%)
Query: 46 EEFHIKYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETE-------DSAFVKS 91
EE H+K+ +G G +GSV L D G+VVA+KKL S E + +KS
Sbjct: 26 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 85
Query: 92 FQNEAHVLSTSVAHA----------------------------------LSYLHHDC--- 114
Q++ V V ++ L Y C
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 145
Query: 115 ----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
T +HRD+++ NIL+++ + DFG ++L D
Sbjct: 146 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 187
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 57/153 (37%), Gaps = 49/153 (32%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQNE 95
E F IG G YG VYKA G+VVALKK+ +ETE + + +K +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 96 AHVLSTSVAHA-------LSYLHHDC--------------------------------TL 116
V V H +LH D +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHV 149
++HRD+ N+L+++ +ADFG AR V
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 57/153 (37%), Gaps = 49/153 (32%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQNE 95
E F IG G YG VYKA G+VVALKK+ +ETE + + +K +
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 96 AHVLSTSVAHA-------LSYLHHDC--------------------------------TL 116
V V H +LH D +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHV 149
++HRD+ N+L+++ +ADFG AR V
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 162
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 32/132 (24%)
Query: 94 NEAHVLSTSVA--HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS 151
NE + + +A ALS LH ++HRDI S++ILL + ++DFG
Sbjct: 118 NEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG--------- 165
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFG 211
+ ++ +P+ ++G W + + +P+ E+ D++S G
Sbjct: 166 ----FCAQVSKEVPRRKXLVGT----PYWMAPELISRLPYGPEV----------DIWSLG 207
Query: 212 VVALKVLMGTHP 223
++ ++++ G P
Sbjct: 208 IMVIEMVDGEPP 219
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 55/162 (33%)
Query: 46 EEFHIKYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETE-------DSAFVKS 91
EE H+K+ +G G +GSV L D G+VVA+KKL S E + +KS
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 67
Query: 92 FQNEAHVLSTSVAHA----------------------------------LSYLHHDC--- 114
Q++ V V ++ L Y C
Sbjct: 68 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 115 ----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
T +HRD+++ NIL+++ + DFG ++L D
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 101 TSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR 154
+ A+ +H L VHRDI +NILLD +ADFG+ L D + R
Sbjct: 169 AEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVR 219
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR-LLHVDSSNRPYEWAL 160
VA + YL + +HRD+++ N+L+ + +ADFG AR + H+D Y+
Sbjct: 199 QVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY----YKKTT 251
Query: 161 TDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
LP + + A F R + T + DV+SFGV+ ++ +
Sbjct: 252 NGRLP--------VKWMAPEALFDR--------------IYTHQSDVWSFGVLLWEIFTL 289
Query: 220 GTHP 223
G P
Sbjct: 290 GGSP 293
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 55/162 (33%)
Query: 46 EEFHIKYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETE-------DSAFVKS 91
EE H+K+ +G G +GSV L D G+VVA+KKL S E + +KS
Sbjct: 26 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 85
Query: 92 FQNEAHVLSTSVAHA----------------------------------LSYLHHDC--- 114
Q++ V V ++ L Y C
Sbjct: 86 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 145
Query: 115 ----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
T +HRD+++ NIL+++ + DFG ++L D
Sbjct: 146 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 187
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+A + YL + +HRD+++ N+L+ N +ADFG AR D +N Y T
Sbjct: 165 QLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLAR----DINNIDYYKKTT 217
Query: 162 D-TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
+ LP + + A F R V T + DV+SFGV+ ++ +
Sbjct: 218 NGRLP--------VKWMAPEALFDR--------------VYTHQSDVWSFGVLMWEIFTL 255
Query: 220 GTHP 223
G P
Sbjct: 256 GGSP 259
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR-LLHVDSSNRPYEWAL 160
VA + YL + +HRD+++ N+L+ + +ADFG AR + H+D Y+
Sbjct: 151 QVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY----YKKTT 203
Query: 161 TDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
LP + + A F R + T + DV+SFGV+ ++ +
Sbjct: 204 NGRLP--------VKWMAPEALFDR--------------IYTHQSDVWSFGVLLWEIFTL 241
Query: 220 GTHP 223
G P
Sbjct: 242 GGSP 245
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR-LLHVDSSNRPYEWAL 160
VA + YL + +HRD+++ N+L+ + +ADFG AR + H+D +
Sbjct: 158 QVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK----TT 210
Query: 161 TDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
LP + + A F R + T + DV+SFGV+ ++ +
Sbjct: 211 NGRLP--------VKWMAPEALFDR--------------IYTHQSDVWSFGVLLWEIFTL 248
Query: 220 GTHP 223
G P
Sbjct: 249 GGSP 252
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 55/162 (33%)
Query: 46 EEFHIKYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETE-------DSAFVKS 91
EE H+K+ +G G +GSV L D G+VVA+KKL S E + +KS
Sbjct: 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 98
Query: 92 FQNEAHVLSTSVAHA----------------------------------LSYLHHDC--- 114
Q++ V V ++ L Y C
Sbjct: 99 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 158
Query: 115 ----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
T +HRD+++ NIL+++ + DFG ++L D
Sbjct: 159 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 200
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 55/162 (33%)
Query: 46 EEFHIKYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETE-------DSAFVKS 91
EE H+K+ +G G +GSV L D G+VVA+KKL S E + +KS
Sbjct: 11 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 70
Query: 92 FQNEAHVLSTSVAHA----------------------------------LSYLHHDC--- 114
Q++ V V ++ L Y C
Sbjct: 71 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 130
Query: 115 ----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
T +HRD+++ NIL+++ + DFG ++L D
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR-LLHVDSSNRPYEWAL 160
VA + YL + +HRD+++ N+L+ + +ADFG AR + H+D Y+
Sbjct: 143 QVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY----YKKTT 195
Query: 161 TDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
LP + + A F R + T + DV+SFGV+ ++ +
Sbjct: 196 NGRLP--------VKWMAPEALFDR--------------IYTHQSDVWSFGVLLWEIFTL 233
Query: 220 GTHP 223
G P
Sbjct: 234 GGSP 237
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 55/162 (33%)
Query: 46 EEFHIKYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETE-------DSAFVKS 91
EE H+K+ +G G +GSV L D G+VVA+KKL S E + +KS
Sbjct: 13 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 72
Query: 92 FQNEAHVLSTSVAHA----------------------------------LSYLHHDC--- 114
Q++ V V ++ L Y C
Sbjct: 73 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 132
Query: 115 ----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
T +HRD+++ NIL+++ + DFG ++L D
Sbjct: 133 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 174
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 72/171 (42%), Gaps = 38/171 (22%)
Query: 56 TGGYGSVYKAELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVL---STSVAHALSYLHH 112
G YG+ Y DG++ + + D K+ + +L S +V L+YL
Sbjct: 70 VGFYGAFYS----DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 113 DCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIG 172
I+HRD+ +NIL++S E + DFG + L D + N+ +G
Sbjct: 126 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS-------------GQLIDEM--ANEFVG 168
Query: 173 CISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
SY + P ++ + V + D++S G+ +++ +G +P
Sbjct: 169 TRSYMS-----------PERLQGTHYSV---QSDIWSMGLSLVEMAVGRYP 205
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 94 NEAHVLST--SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS 151
NE + + +V AL+YLH ++HRDI S++ILL + ++DFG + D
Sbjct: 139 NEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV 195
Query: 152 SNR 154
R
Sbjct: 196 PKR 198
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR-LLHVDSSNRPYEWAL 160
VA + YL + +HRD+++ N+L+ + +ADFG AR + H+D Y+
Sbjct: 158 QVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY----YKKTT 210
Query: 161 TDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
LP + + A F R + T + DV+SFGV+ ++ +
Sbjct: 211 NGRLP--------VKWMAPEALFDR--------------IYTHQSDVWSFGVLLWEIFTL 248
Query: 220 GTHP 223
G P
Sbjct: 249 GGSP 252
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNIL---LDSNLEAFVADFGTARL 146
+ +A L V A+ YLH L IVHRD+ N+L LD + + ++DFG +++
Sbjct: 115 ERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNIL---LDSNLEAFVADFGTARL 146
+ +A L V A+ YLH L IVHRD+ N+L LD + + ++DFG +++
Sbjct: 115 ERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNIL---LDSNLEAFVADFGTARL 146
+ +A L V A+ YLH L IVHRD+ N+L LD + + ++DFG +++
Sbjct: 115 ERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 75/227 (33%), Gaps = 78/227 (34%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELPDGK-VVALKKLHQSETEDSAFVKSFQNE----AHVLS 100
++F I +G G +G+VY A K ++ALK L +S+ E + E +H+
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 101 TSVAHALSYLH-------------------------------------------HDC-TL 116
++ +Y H H C
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGCISY 176
++HRDI N+L+ E +ADFG + +H S R D LP
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPP---------- 181
Query: 177 YALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
E+ EK D++ GV+ + L+G P
Sbjct: 182 -----------------EMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 55/162 (33%)
Query: 46 EEFHIKYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETE-------DSAFVKS 91
EE H+K+ +G G +GSV L D G+VVA+KKL S E + +KS
Sbjct: 15 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 74
Query: 92 FQNEAHVLSTSVAHA----------------------------------LSYLHHDC--- 114
Q++ V V ++ L Y C
Sbjct: 75 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 134
Query: 115 ----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
T +HRD+++ NIL+++ + DFG ++L D
Sbjct: 135 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 176
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+A + YL + +HRD+++ N+L+ N +ADFG AR D +N Y T
Sbjct: 165 QLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTT 217
Query: 162 D-TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
+ LP + + A F R V T + DV+SFGV+ ++ +
Sbjct: 218 NGRLP--------VKWMAPEALFDR--------------VYTHQSDVWSFGVLMWEIFTL 255
Query: 220 GTHP 223
G P
Sbjct: 256 GGSP 259
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+A + YL + +HRD+++ N+L+ N +ADFG AR D +N Y T
Sbjct: 165 QLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTT 217
Query: 162 D-TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
+ LP + + A F R V T + DV+SFGV+ ++ +
Sbjct: 218 NGRLP--------VKWMAPEALFDR--------------VYTHQSDVWSFGVLMWEIFTL 255
Query: 220 GTHP 223
G P
Sbjct: 256 GGSP 259
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 34/129 (26%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP 155
A+ LST AL+YL VHRDI++ N+L+ SN + DFG +R + + +
Sbjct: 117 AYQLST----ALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXK- 168
Query: 156 YEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVAL 215
A LP W + N F T DV+ FGV
Sbjct: 169 ---ASKGKLP------------IKWMAPESINFRRF----------TSASDVWMFGVCMW 203
Query: 216 KVLM-GTHP 223
++LM G P
Sbjct: 204 EILMHGVKP 212
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 95 EAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
E ++ VA ++YL VHRD+++ N L+ N+ +ADFG +R
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+A + YL + +HRD+++ N+L+ N +ADFG AR D +N Y T
Sbjct: 165 QLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTT 217
Query: 162 D-TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
+ LP + + A F R V T + DV+SFGV+ ++ +
Sbjct: 218 NGRLP--------VKWMAPEALFDR--------------VYTHQSDVWSFGVLMWEIFTL 255
Query: 220 GTHP 223
G P
Sbjct: 256 GGSP 259
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNIL---LDSNLEAFVADFGTARL 146
+ +A L V A+ YLH L IVHRD+ N+L LD + + ++DFG +++
Sbjct: 115 ERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 59/157 (37%), Gaps = 50/157 (31%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELPDG-KVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVA 104
E+F I IG G +G V ++ + ++ A+K L++ E A F+ E VL
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 133
Query: 105 HALSYLHH-----------------------------------------DCTLSI----- 118
++ LH+ + L+I
Sbjct: 134 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 193
Query: 119 ---VHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
VHRDI +N+LLD N +ADFG+ ++ D +
Sbjct: 194 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT 230
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 98 VLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ + + ++YLH +HRD+++ N+LLD++ + DFG A+
Sbjct: 138 LFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+A + YL + +HRD+++ N+L+ N +ADFG AR D +N Y T
Sbjct: 165 QLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTT 217
Query: 162 D-TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
+ LP + + A F R V T + DV+SFGV+ ++ +
Sbjct: 218 NGRLP--------VKWMAPEALFDR--------------VYTHQSDVWSFGVLMWEIFTL 255
Query: 220 GTHP 223
G P
Sbjct: 256 GGSP 259
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+A + YL + +HRD+++ N+L+ N +ADFG AR D +N Y T
Sbjct: 152 QLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLAR----DINNIDYYKKTT 204
Query: 162 D-TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
+ LP + + A F R V T + DV+SFGV+ ++ +
Sbjct: 205 NGRLP--------VKWMAPEALFDR--------------VYTHQSDVWSFGVLMWEIFTL 242
Query: 220 GTHP 223
G P
Sbjct: 243 GGSP 246
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHV--DSSNRPY 156
S V A+ YL + + VHRD+++ N+L+ + A V+DFG + D+ P
Sbjct: 294 FSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 350
Query: 157 EWALTDTLPQ 166
+W + L +
Sbjct: 351 KWTAPEALRE 360
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 33/124 (26%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLHVDSSNRPYEWALTDT 163
+L+Y+H + I HRDI N+LLD + + DFG+A+ L N Y +
Sbjct: 171 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 227
Query: 164 LPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTH- 222
P++ I G Y T DV+S G V ++L+G
Sbjct: 228 APEL--IFGATDY-------------------------TSSIDVWSAGCVLAELLLGQPI 260
Query: 223 -PGE 225
PG+
Sbjct: 261 FPGD 264
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADF 141
D AF + EA + S+ A+ YLH +++I HRD+ N+L S N + DF
Sbjct: 155 DQAFT---EREASEIXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF 208
Query: 142 GTAR 145
G A+
Sbjct: 209 GFAK 212
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+A + YL + +HRD+++ N+L+ N +ADFG AR D +N Y T
Sbjct: 165 QLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTT 217
Query: 162 D-TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
+ LP + + A F R V T + DV+SFGV+ ++ +
Sbjct: 218 NGRLP--------VKWMAPEALFDR--------------VYTHQSDVWSFGVLMWEIFTL 255
Query: 220 GTHP 223
G P
Sbjct: 256 GGSP 259
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 33/124 (26%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLHVDSSNRPYEWALTDT 163
+L+Y+H + I HRDI N+LLD + + DFG+A+ L N Y +
Sbjct: 161 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 217
Query: 164 LPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT-- 221
P++ I G Y T DV+S G V ++L+G
Sbjct: 218 APEL--IFGATDY-------------------------TSSIDVWSAGCVLAELLLGQPI 250
Query: 222 HPGE 225
PG+
Sbjct: 251 FPGD 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+A + YL + +HRD+++ N+L+ N +ADFG AR D +N Y T
Sbjct: 211 QLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTT 263
Query: 162 D-TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
+ LP + + A F R V T + DV+SFGV+ ++ +
Sbjct: 264 NGRLP--------VKWMAPEALFDR--------------VYTHQSDVWSFGVLMWEIFTL 301
Query: 220 GTHP 223
G P
Sbjct: 302 GGSP 305
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+A + YL + +HRD+++ N+L+ N +ADFG AR D +N Y T
Sbjct: 157 QLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTT 209
Query: 162 D-TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
+ LP + + A F R V T + DV+SFGV+ ++ +
Sbjct: 210 NGRLP--------VKWMAPEALFDR--------------VYTHQSDVWSFGVLMWEIFTL 247
Query: 220 GTHP 223
G P
Sbjct: 248 GGSP 251
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 33/124 (26%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLHVDSSNRPYEWALTDT 163
+L+Y+H + I HRDI N+LLD + + DFG+A+ L N Y +
Sbjct: 169 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 225
Query: 164 LPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTH- 222
P++ I G Y T DV+S G V ++L+G
Sbjct: 226 APEL--IFGATDY-------------------------TSSIDVWSAGCVLAELLLGQPI 258
Query: 223 -PGE 225
PG+
Sbjct: 259 FPGD 262
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHV--DSSNRPY 156
S V A+ YL + + VHRD+++ N+L+ + A V+DFG + D+ P
Sbjct: 122 FSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 178
Query: 157 EWALTDTLPQ 166
+W + L +
Sbjct: 179 KWTAPEALRE 188
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+A + YL + +HRD+++ N+L+ N +ADFG AR D +N Y T
Sbjct: 154 QLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKKTT 206
Query: 162 D-TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
+ LP + + A F R V T + DV+SFGV+ ++ +
Sbjct: 207 NGRLP--------VKWMAPEALFDR--------------VYTHQSDVWSFGVLMWEIFTL 244
Query: 220 GTHP 223
G P
Sbjct: 245 GGSP 248
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 33/124 (26%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLHVDSSNRPYEWALTDT 163
+L+Y+H + I HRDI N+LLD + + DFG+A+ L N Y +
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 164 LPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT-- 221
P++ I G Y T DV+S G V ++L+G
Sbjct: 190 APEL--IFGATDY-------------------------TSSIDVWSAGCVLAELLLGQPI 222
Query: 222 HPGE 225
PG+
Sbjct: 223 FPGD 226
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 33/124 (26%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLHVDSSNRPYEWALTDT 163
+L+Y+H + I HRDI N+LLD + + DFG+A+ L N Y +
Sbjct: 167 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 223
Query: 164 LPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT-- 221
P++ I G Y T DV+S G V ++L+G
Sbjct: 224 APEL--IFGATDY-------------------------TSSIDVWSAGCVLAELLLGQPI 256
Query: 222 HPGE 225
PG+
Sbjct: 257 FPGD 260
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 33/124 (26%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLHVDSSNRPYEWALTDT 163
+L+Y+H + I HRDI N+LLD + + DFG+A+ L N Y +
Sbjct: 146 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 202
Query: 164 LPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT-- 221
P++ I G Y T DV+S G V ++L+G
Sbjct: 203 APEL--IFGATDY-------------------------TSSIDVWSAGCVLAELLLGQPI 235
Query: 222 HPGE 225
PG+
Sbjct: 236 FPGD 239
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 33/124 (26%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLHVDSSNRPYEWALTDT 163
+L+Y+H + I HRDI N+LLD + + DFG+A+ L N Y +
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 164 LPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT-- 221
P++ I G Y T DV+S G V ++L+G
Sbjct: 190 APEL--IFGATDY-------------------------TSSIDVWSAGCVLAELLLGQPI 222
Query: 222 HPGE 225
PG+
Sbjct: 223 FPGD 226
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 33/124 (26%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLHVDSSNRPYEWALTDT 163
+L+Y+H + I HRDI N+LLD + + DFG+A+ L N Y +
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 164 LPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT-- 221
P++ I G Y T DV+S G V ++L+G
Sbjct: 190 APEL--IFGATDY-------------------------TSSIDVWSAGCVLAELLLGQPI 222
Query: 222 HPGE 225
PG+
Sbjct: 223 FPGD 226
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 59/157 (37%), Gaps = 50/157 (31%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELPDG-KVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVA 104
E+F I IG G +G V ++ + ++ A+K L++ E A F+ E VL
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDC 149
Query: 105 HALSYLHH-----------------------------------------DCTLSI----- 118
++ LH+ + L+I
Sbjct: 150 QWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 209
Query: 119 ---VHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
VHRDI +N+LLD N +ADFG+ ++ D +
Sbjct: 210 LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGT 246
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++++ + +HR++ + NIL+ L +ADFG ARL+
Sbjct: 110 MAAQIAEGMAFIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIE 156
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHV--DSSNRPY 156
S V A+ YL + + VHRD+++ N+L+ + A V+DFG + D+ P
Sbjct: 107 FSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 163
Query: 157 EWALTDTLPQ 166
+W + L +
Sbjct: 164 KWTAPEALRE 173
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 33/124 (26%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLHVDSSNRPYEWALTDT 163
+L+Y+H + I HRDI N+LLD + + DFG+A+ L N Y +
Sbjct: 138 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 194
Query: 164 LPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT-- 221
P++ I G Y T DV+S G V ++L+G
Sbjct: 195 APEL--IFGATDY-------------------------TSSIDVWSAGCVLAELLLGQPI 227
Query: 222 HPGE 225
PG+
Sbjct: 228 FPGD 231
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 33/124 (26%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLHVDSSNRPYEWALTDT 163
+L+Y+H + I HRDI N+LLD + + DFG+A+ L N Y +
Sbjct: 212 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 268
Query: 164 LPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT-- 221
P++ I G Y T DV+S G V ++L+G
Sbjct: 269 APEL--IFGATDY-------------------------TSSIDVWSAGCVLAELLLGQPI 301
Query: 222 HPGE 225
PG+
Sbjct: 302 FPGD 305
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHV--DSSNRPY 156
S V A+ YL + + VHRD+++ N+L+ + A V+DFG + D+ P
Sbjct: 113 FSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 169
Query: 157 EWALTDTLPQ 166
+W + L +
Sbjct: 170 KWTAPEALRE 179
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTARLLHVDSSNRPYEWALTD 162
A+ YLH + I+HRD+ N+LL S E + DFG +++L S R T
Sbjct: 132 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 188
Query: 163 TLPQVNKIIGCISY 176
P+V +G Y
Sbjct: 189 LAPEVLVSVGTAGY 202
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 45/144 (31%)
Query: 90 KSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K F H++ S VA + +L + +HRD+++ NILL + DFG AR +
Sbjct: 179 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 235
Query: 148 HVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMV 200
+ D + P +W +T+ + V
Sbjct: 236 YKDPDYVRKGDARLPLKWMAPETI--------------------------------FDRV 263
Query: 201 VTEKCDVYSFGVVALKVL-MGTHP 223
T + DV+SFGV+ ++ +G P
Sbjct: 264 YTIQSDVWSFGVLLWEIFSLGASP 287
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 197
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTARLLHVDSSNRPYEWALTD 162
A+ YLH + I+HRD+ N+LL S E + DFG +++L S R T
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 163 TLPQVNKIIGCISY 176
P+V +G Y
Sbjct: 183 LAPEVLVSVGTAGY 196
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADF 141
D AF + EA + S+ A+ YLH +++I HRD+ N+L S N + DF
Sbjct: 155 DQAFT---EREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF 208
Query: 142 GTAR 145
G A+
Sbjct: 209 GFAK 212
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 130 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 175
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 137 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 182
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 138 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 183
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 129 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 174
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+A + YL + +HRD+++ N+L+ N +ADFG AR D +N Y T
Sbjct: 165 QLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKNTT 217
Query: 162 D-TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
+ LP + + A F R V T + DV+SFGV+ ++ +
Sbjct: 218 NGRLP--------VKWMAPEALFDR--------------VYTHQSDVWSFGVLMWEIFTL 255
Query: 220 GTHP 223
G P
Sbjct: 256 GGSP 259
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTARLLHVDSSNRPYEWALTD 162
A+ YLH + I+HRD+ N+LL S E + DFG +++L S R T
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 163 TLPQVNKIIGCISY 176
P+V +G Y
Sbjct: 183 LAPEVLVSVGTAGY 196
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADF 141
D AF + EA + S+ A+ YLH +++I HRD+ N+L S N + DF
Sbjct: 117 DQAFT---EREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF 170
Query: 142 GTAR 145
G A+
Sbjct: 171 GFAK 174
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTARLLHVDSSNRPYEWALTD 162
A+ YLH + I+HRD+ N+LL S E + DFG +++L S R T
Sbjct: 125 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 181
Query: 163 TLPQVNKIIGCISY 176
P+V +G Y
Sbjct: 182 LAPEVLVSVGTAGY 195
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADF 141
D AF + EA + S+ A+ YLH +++I HRD+ N+L S N + DF
Sbjct: 115 DQAFT---EREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF 168
Query: 142 GTAR 145
G A+
Sbjct: 169 GFAK 172
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 179
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADF 141
D AF + EA + S+ A+ YLH +++I HRD+ N+L S N + DF
Sbjct: 125 DQAFT---EREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF 178
Query: 142 GTAR 145
G A+
Sbjct: 179 GFAK 182
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTARLLHVDSSNRPYEWALTD 162
A+ YLH + I+HRD+ N+LL S E + DFG +++L S R T
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 182
Query: 163 TLPQVNKIIGCISY 176
P+V +G Y
Sbjct: 183 LAPEVLVSVGTAGY 196
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 130 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 175
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADF 141
D AF + EA + S+ A+ YLH +++I HRD+ N+L S N + DF
Sbjct: 111 DQAFT---EREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF 164
Query: 142 GTAR 145
G A+
Sbjct: 165 GFAK 168
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADF 141
D AF + EA + S+ A+ YLH +++I HRD+ N+L S N + DF
Sbjct: 116 DQAFT---EREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF 169
Query: 142 GTAR 145
G A+
Sbjct: 170 GFAK 173
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 140 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 185
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 177
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADF 141
D AF + EA + S+ A+ YLH +++I HRD+ N+L S N + DF
Sbjct: 111 DQAFT---EREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF 164
Query: 142 GTAR 145
G A+
Sbjct: 165 GFAK 168
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 179
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADF 141
D AF + EA + S+ A+ YLH +++I HRD+ N+L S N + DF
Sbjct: 111 DQAFT---EREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF 164
Query: 142 GTAR 145
G A+
Sbjct: 165 GFAK 168
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 45/144 (31%)
Query: 90 KSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K F H++ S VA + +L + +HRD+++ NILL + DFG AR +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 148 HVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMV 200
+ D + P +W +T+ + V
Sbjct: 199 YKDPDXVRKGDARLPLKWMAPETI--------------------------------FDRV 226
Query: 201 VTEKCDVYSFGVVALKVL-MGTHP 223
T + DV+SFGV+ ++ +G P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 45/144 (31%)
Query: 90 KSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K F H++ S VA + +L + +HRD+++ NILL + DFG AR +
Sbjct: 144 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 200
Query: 148 HVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMV 200
+ D + P +W +T+ + V
Sbjct: 201 YKDPDYVRKGDARLPLKWMAPETI--------------------------------FDRV 228
Query: 201 VTEKCDVYSFGVVALKVL-MGTHP 223
T + DV+SFGV+ ++ +G P
Sbjct: 229 YTIQSDVWSFGVLLWEIFSLGASP 252
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 177
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 137 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 182
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 181
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADF 141
D AF + EA + S+ A+ YLH +++I HRD+ N+L S N + DF
Sbjct: 109 DQAFT---EREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF 162
Query: 142 GTAR 145
G A+
Sbjct: 163 GFAK 166
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 45/144 (31%)
Query: 90 KSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K F H++ S VA + +L + +HRD+++ NILL + DFG AR +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 148 HVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMV 200
+ D + P +W +T+ + V
Sbjct: 199 YKDPDYVRKGDARLPLKWMAPETI--------------------------------FDRV 226
Query: 201 VTEKCDVYSFGVVALKVL-MGTHP 223
T + DV+SFGV+ ++ +G P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADF 141
D AF + EA + S+ A+ YLH +++I HRD+ N+L S N + DF
Sbjct: 161 DQAFT---EREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF 214
Query: 142 GTAR 145
G A+
Sbjct: 215 GFAK 218
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 28/106 (26%)
Query: 119 VHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTD-TLPQVNKIIGCISYY 177
HRD+ NIL+ ++ A++ DFG A A TD L Q+ +G + Y
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIA-------------SATTDEKLTQLGNTVGTLYYX 202
Query: 178 ALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
A + + H T + D+Y+ V + L G+ P
Sbjct: 203 APERFSESH--------------ATYRADIYALTCVLYECLTGSPP 234
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 35.4 bits (80), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADF 141
D AF + EA + S+ A+ YLH +++I HRD+ N+L S N + DF
Sbjct: 110 DQAFT---EREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF 163
Query: 142 GTAR 145
G A+
Sbjct: 164 GFAK 167
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADF 141
D AF + EA + S+ A+ YLH +++I HRD+ N+L S N + DF
Sbjct: 109 DQAFT---EREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF 162
Query: 142 GTAR 145
G A+
Sbjct: 163 GFAK 166
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 45/144 (31%)
Query: 90 KSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K F H++ S VA + +L + +HRD+++ NILL + DFG AR +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 148 HVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMV 200
+ D + P +W +T+ + V
Sbjct: 190 YKDPDYVRKGDARLPLKWMAPETI--------------------------------FDRV 217
Query: 201 VTEKCDVYSFGVVALKVL-MGTHP 223
T + DV+SFGV+ ++ +G P
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 181
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 58/157 (36%), Gaps = 50/157 (31%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELPDG-KVVALKKLHQSETEDSAFVKSFQNEAHVLS---- 100
E+F I IG G +G V +L + KV A+K L++ E A F+ E VL
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 101 ---TSVAHALS-----YLHHDC-------------------------------------T 115
T++ +A YL D
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 116 LSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
L VHRDI +NIL+D N +ADFG+ L D +
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 94 NEAHVLSTSVAHALSYLH-HDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
E +L V L+ H HD I+HRDI S NI L + + DFG AR+L+
Sbjct: 123 QEDQILDWFVQICLALKHVHD--RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 45/144 (31%)
Query: 90 KSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K F H++ S VA + +L + +HRD+++ NILL + DFG AR +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 148 HVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMV 200
+ D + P +W +T+ + V
Sbjct: 190 YKDPDYVRKGDARLPLKWMAPETI--------------------------------FDRV 217
Query: 201 VTEKCDVYSFGVVALKVL-MGTHP 223
T + DV+SFGV+ ++ +G P
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 177
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 45/144 (31%)
Query: 90 KSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K F H++ S VA + +L + +HRD+++ NILL + DFG AR +
Sbjct: 138 KDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDI 194
Query: 148 HVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMV 200
+ D + P +W +T+ + V
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETI--------------------------------FDRV 222
Query: 201 VTEKCDVYSFGVVALKVL-MGTHP 223
T + DV+SFGV+ ++ +G P
Sbjct: 223 YTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 197
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPD 177
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
+ E + ++ + LH L+IVHRD+ NILLD ++ + DFG
Sbjct: 110 EKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFG 156
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL-HVDSSNRPYEWAL 160
+A + YL + +HRD+++ N+L+ N +ADFG AR + ++D +
Sbjct: 165 QLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK----TT 217
Query: 161 TDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
LP + + A F R V T + DV+SFGV+ ++ +
Sbjct: 218 NGRLP--------VKWMAPEALFDR--------------VYTHQSDVWSFGVLMWEIFTL 255
Query: 220 GTHP 223
G P
Sbjct: 256 GGSP 259
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ VA + YL +HR++++ NIL+ N A +ADFG +R
Sbjct: 144 FAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 31/124 (25%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL-HVDSSNRPYEWAL 160
+A + YL + +HRD+++ N+L+ N +ADFG AR + ++D +
Sbjct: 165 QLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK----TT 217
Query: 161 TDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL-M 219
LP + + A F R V T + DV+SFGV+ ++ +
Sbjct: 218 NGRLP--------VKWMAPEALFDR--------------VYTHQSDVWSFGVLMWEIFTL 255
Query: 220 GTHP 223
G P
Sbjct: 256 GGSP 259
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 45/144 (31%)
Query: 90 KSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K F H++ S VA + +L + +HRD+++ NILL + DFG AR +
Sbjct: 138 KDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDI 194
Query: 148 HVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMV 200
+ D + P +W +T+ + V
Sbjct: 195 YKDPDYVRKGDARLPLKWMAPETI--------------------------------FDRV 222
Query: 201 VTEKCDVYSFGVVALKVL-MGTHP 223
T + DV+SFGV+ ++ +G P
Sbjct: 223 YTIQSDVWSFGVLLWEIFSLGASP 246
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 132 QILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPD 177
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 74 ALKKLHQSETEDSAFVKSFQNEAHV-LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS 132
+L + + E D + + E + S VA + +L + +HRD+++ NILL
Sbjct: 178 SLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSE 234
Query: 133 NLEAFVADFGTAR 145
N + DFG AR
Sbjct: 235 NNVVKICDFGLAR 247
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARL 146
L +LH + +VHRD+ NIL+ S+ + +ADFG AR+
Sbjct: 131 RGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 41 LINATEEFHIKYCIGTGGYGSVYKA-ELPD-GKVVALKKLHQSETEDSAFVKSFQNEAHV 98
L A +++ IG G YG V+KA +L + G+ VALK++ E+ + + + A +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 99 --LSTSVAHALSYLHHDCTLSIVHRD 122
L T + L CT+S R+
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRE 91
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARL 146
L +LH + +VHRD+ NIL+ S+ + +ADFG AR+
Sbjct: 131 RGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 39 EDLINATEEFHIKYCIGTGGYGSVYKA-ELPD-GKVVALKKLHQSETEDSAFVKSFQNEA 96
+ L A +++ IG G YG V+KA +L + G+ VALK++ E+ + + + A
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVA 63
Query: 97 HV--LSTSVAHALSYLHHDCTLSIVHRD 122
+ L T + L CT+S R+
Sbjct: 64 VLRHLETFEHPNVVRLFDVCTVSRTDRE 91
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLL 147
+L+Y+H + I HRDI N+LLD + + DFG+A+ L
Sbjct: 167 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
Score = 30.8 bits (68), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Query: 54 IGTGGYGSVYKAELPD-GKVVALKKLHQSE 82
IG G +G VY+A+L D G++VA+KK+ Q +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDK 91
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 71/187 (37%), Gaps = 53/187 (28%)
Query: 42 INATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETED-------------- 85
+ + E F IG G YG VYKA G+VVALKK+ +ETE
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 86 --------------------------SAFVKSFQNEAHVLSTSVAHALSYLHHDC----- 114
S +K F + + + + SYL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 115 --TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKII 171
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LL 179
Query: 172 GCISYYA 178
GC YY+
Sbjct: 180 GC-KYYS 185
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+++ +A + YL + VHRD+++ N L+ +NL + DFG +R
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLL 147
+L+Y+H + I HRDI N+LLD + + DFG+A+ L
Sbjct: 152 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLL 147
+L+Y+H + I HRDI N+LLD + + DFG+A+ L
Sbjct: 137 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 71/187 (37%), Gaps = 53/187 (28%)
Query: 42 INATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETED-------------- 85
+ + E F IG G YG VYKA G+VVALKK+ +ETE
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 86 --------------------------SAFVKSFQNEAHVLSTSVAHALSYLHHDC----- 114
S +K F + + + + SYL
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 115 --TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKII 171
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++
Sbjct: 122 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LL 179
Query: 172 GCISYYA 178
GC YY+
Sbjct: 180 GC-KYYS 185
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLL 147
+L+Y+H + I HRDI N+LLD + + DFG+A+ L
Sbjct: 145 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLL 147
+L+Y+H + I HRDI N+LLD + + DFG+A+ L
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
+ E + ++ + LH L+IVHRD+ NILLD ++ + DFG
Sbjct: 123 EKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG 169
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLL 147
+L+Y+H + I HRDI N+LLD + + DFG+A+ L
Sbjct: 141 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLL 147
+L+Y+H + I HRDI N+LLD + + DFG+A+ L
Sbjct: 145 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARL 146
L +LH + +VHRD+ NIL+ S+ + +ADFG AR+
Sbjct: 131 RGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 41 LINATEEFHIKYCIGTGGYGSVYKA-ELPD-GKVVALKKLHQSETEDSAFVKSFQNEAHV 98
L A +++ IG G YG V+KA +L + G+ VALK++ E+ + + + A +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 99 --LSTSVAHALSYLHHDCTLSIVHRD 122
L T + L CT+S R+
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRE 91
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLL 147
+L+Y+H + I HRDI N+LLD + + DFG+A+ L
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLL 147
+L+Y+H + I HRDI N+LLD + + DFG+A+ L
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 16/83 (19%)
Query: 54 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAHA----LS 108
IG G +G VY+A+L D G++VA+KK+ Q K F+N + + H L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD--------KRFKNRELQIMRKLDHCNIVRLR 79
Query: 109 YLHHDCTLSIVHRDISSNNILLD 131
Y + S +D+ N++LD
Sbjct: 80 YFFYS---SGEKKDVVYLNLVLD 99
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLL 147
+L+Y+H + I HRDI N+LLD + + DFG+A+ L
Sbjct: 134 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 71/187 (37%), Gaps = 53/187 (28%)
Query: 42 INATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETED-------------- 85
+ + E F IG G YG VYKA G+VVALKK+ +ETE
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 86 --------------------------SAFVKSFQNEAHVLSTSVAHALSYLHHDC----- 114
S +K F + + + + SYL
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 115 --TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKII 171
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LL 178
Query: 172 GCISYYA 178
GC YY+
Sbjct: 179 GC-KYYS 184
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLL 147
+L+Y+H + I HRDI N+LLD + + DFG+A+ L
Sbjct: 133 RSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
+ E + ++ + LH L+IVHRD+ NILLD ++ + DFG
Sbjct: 123 EKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG 169
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
+++ V+ AL+YLH + I+HRD+ + NIL + + +ADFG +
Sbjct: 134 ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 35/132 (26%)
Query: 95 EAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS-NLEAF--VADFGTARLLHVDS 151
+A V+ V +YLH +IVHRD+ N+LL+S + +A + DFG + V
Sbjct: 122 DAAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 178
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFG 211
++ + +G Y A ++++ EKCDV+S G
Sbjct: 179 --------------KMKERLGTAYYIAPEVLRKKYD---------------EKCDVWSCG 209
Query: 212 VVALKVLMGTHP 223
V+ +L G P
Sbjct: 210 VILYILLCGYPP 221
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 99 LSTSVAHALSYLHHDCTLS-----IVHRDISSNNILLDSNLEAFVADFGTA 144
L+ S A L++LH + + I HRD+ S NIL+ N +AD G A
Sbjct: 111 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
+++ V+ AL+YLH + I+HRD+ + NIL + + +ADFG +
Sbjct: 134 ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
+++ V+ AL+YLH + I+HRD+ + NIL + + +ADFG +
Sbjct: 134 ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 99 LSTSVAHALSYLHHDCT-----LSIVHRDISSNNILLDSNLEAFVADFGTA 144
L+ S A L++LH + +I HRD+ S NIL+ N +AD G A
Sbjct: 105 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 71/186 (38%), Gaps = 53/186 (28%)
Query: 43 NATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSF 92
+ E F IG G YG VYKA G+VVALKK+ +ETE + + +K
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 93 QNEAHVLSTSVAHA-----LSYLHHDCTLS------------------------------ 117
+ V V H L + H D L
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 118 ----IVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIG 172
++HRD+ N+L+++ +ADFG AR V +E L P++ ++G
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLG 180
Query: 173 CISYYA 178
C YY+
Sbjct: 181 C-KYYS 185
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 99 LSTSVAHALSYLHHDCTLS-----IVHRDISSNNILLDSNLEAFVADFGTA 144
L+ S A L++LH + + I HRD+ S NIL+ N +AD G A
Sbjct: 108 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARL 146
+ L Y+H + +++HRD+ +N+L+++ + + DFG AR+
Sbjct: 152 QILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARI 193
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
+++ V+ AL+YLH + I+HRD+ + NIL + + +ADFG +
Sbjct: 107 ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTARLLHVDSSNRPYEWALTD 162
A+ YLH + I+HRD+ N+LL S E + DFG +++L S R T
Sbjct: 251 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 307
Query: 163 TLPQVNKIIGCISY 176
P+V +G Y
Sbjct: 308 LAPEVLVSVGTAGY 321
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + +++HRD+ +N+LL++ + + DFG AR+ D
Sbjct: 134 QILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPD 179
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 34.7 bits (78), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 29/136 (21%)
Query: 95 EAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLD-----SNLEAFVADFGTARLLHV 149
EA V+ VA AL +LH+ I HRD+ NIL + S ++ D G+ L+
Sbjct: 112 EASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG 168
Query: 150 DSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVEL--AYTMVVTEKCDV 207
D S + P++ G Y A P VE + ++CD+
Sbjct: 169 DCS--------PISTPELLTPCGSAEYMA-----------PEVVEAFSEEASIYDKRCDL 209
Query: 208 YSFGVVALKVLMGTHP 223
+S GV+ +L G P
Sbjct: 210 WSLGVILYILLSGYPP 225
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 34.7 bits (78), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 99 LSTSVAHALSYLHHDCT-----LSIVHRDISSNNILLDSNLEAFVADFGTA 144
L+ S A L++LH + +I HRD+ S NIL+ N +AD G A
Sbjct: 106 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 34.7 bits (78), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 99 LSTSVAHALSYLHHDCT-----LSIVHRDISSNNILLDSNLEAFVADFGTA 144
L+ S A L++LH + +I HRD+ S NIL+ N +AD G A
Sbjct: 144 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 69/183 (37%), Gaps = 53/183 (28%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQNE 95
E F IG G YG VYKA G+VVALKK+ +ETE + + +K +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 96 AHVLSTSVAHA-------LSYLHHDCTL-------------------------------- 116
V V H ++H D
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGCIS 175
++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI--LLGC-K 178
Query: 176 YYA 178
YY+
Sbjct: 179 YYS 181
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 26/120 (21%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSN-LEAFVADFGTARLLHVDSSNRPYEWALTDT 163
L YLH T I+H D+ ++N+LL S+ A + DFG A L D L +
Sbjct: 175 EGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD--------GLGKS 223
Query: 164 LPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
L + I G ++ A E+ K D++S + L +L G HP
Sbjct: 224 LLTGDYIPGTETHMA--------------PEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 26/120 (21%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSN-LEAFVADFGTARLLHVDSSNRPYEWALTDT 163
L YLH T I+H D+ ++N+LL S+ A + DFG A L D L +
Sbjct: 161 EGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD--------GLGKS 209
Query: 164 LPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
L + I G ++ A E+ K D++S + L +L G HP
Sbjct: 210 LLTGDYIPGTETHMA--------------PEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 86 SAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ VK +E + + + L Y+H + I+HRD+ + N+L+ + +ADFG AR
Sbjct: 117 NVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
Query: 146 LLHVDSSNRP 155
+ +++P
Sbjct: 174 AFSLAKNSQP 183
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 34.7 bits (78), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
D VKSF + + L + H + +++HRD+ N+L++ N E +ADFG A
Sbjct: 99 DPEIVKSFLFQ-------LLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLADFGLA 148
Query: 145 R 145
R
Sbjct: 149 R 149
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 32 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 92 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 151
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 152 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 188
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 86 SAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ VK +E + + + L Y+H + I+HRD+ + N+L+ + +ADFG AR
Sbjct: 117 NVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
Query: 146 LLHVDSSNRP 155
+ +++P
Sbjct: 174 AFSLAKNSQP 183
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 86 SAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ VK +E + + + L Y+H + I+HRD+ + N+L+ + +ADFG AR
Sbjct: 116 NVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
Query: 146 LLHVDSSNRP 155
+ +++P
Sbjct: 173 AFSLAKNSQP 182
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 99 LSTSVAHALSYLHHDCT-----LSIVHRDISSNNILLDSNLEAFVADFGTA 144
L+ S A L++LH + +I HRD+ S NIL+ N +AD G A
Sbjct: 131 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTARLLHVDSSNRPYEWALTD 162
A+ YLH + I+HRD+ N+LL S E + DFG +++L S R T
Sbjct: 265 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY 321
Query: 163 TLPQVNKIIGCISY 176
P+V +G Y
Sbjct: 322 LAPEVLVSVGTAGY 335
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 30/122 (24%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALT 161
+A L +LH +L I++RD+ NILLD + DFG ++ +D + Y +
Sbjct: 138 ELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEA-IDHEKKAYSFC-- 191
Query: 162 DTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGT 221
G + Y A E+ + D +S+GV+ ++L G+
Sbjct: 192 ----------GTVEYMA--------------PEVVNRQGHSHSADWWSYGVLMFEMLTGS 227
Query: 222 HP 223
P
Sbjct: 228 LP 229
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 98 VLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ + + ++YLH + +HR++++ N+LLD++ + DFG A+
Sbjct: 121 LFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 161
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 69/183 (37%), Gaps = 53/183 (28%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQNE 95
E F IG G YG VYKA G+VVAL K+ +ETE + + +K +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 96 AHVLSTSVAHA-------LSYLHHDC--------------------------------TL 116
V V H +LH D +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGCIS 175
++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI--LLGC-K 179
Query: 176 YYA 178
YY+
Sbjct: 180 YYS 182
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 125 HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL 161
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 69/183 (37%), Gaps = 53/183 (28%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETE--------DSAFVKSFQNE 95
E F IG G YG VYKA G+VVAL K+ +ETE + + +K +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 96 AHVLSTSVAHA-------LSYLHHDC--------------------------------TL 116
V V H +LH D +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIGCIS 175
++HRD+ N+L+++ +ADFG AR V +E L P++ ++GC
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI--LLGC-K 178
Query: 176 YYA 178
YY+
Sbjct: 179 YYS 181
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 166
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 45/144 (31%)
Query: 90 KSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K F H++ S VA + +L + +HRD+++ NILL + DFG AR +
Sbjct: 142 KDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 148 HVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMV 200
D + P +W +T+ + V
Sbjct: 199 XKDPDXVRKGDARLPLKWMAPETI--------------------------------FDRV 226
Query: 201 VTEKCDVYSFGVVALKVL-MGTHP 223
T + DV+SFGV+ ++ +G P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 166
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ A + AL YLH + +V+RDI N++LD + + DFG +
Sbjct: 109 EERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 165
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 10/69 (14%)
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD-------SSNRP 155
+A + YL + + +HRD+++ N +L ++ VADFG +R ++ +S P
Sbjct: 146 IACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLP 202
Query: 156 YEWALTDTL 164
+W ++L
Sbjct: 203 VKWLALESL 211
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 35 KISYEDLINATEEFHIKYCIGTGGYGSVYKAEL--PDGKVVALK-KLHQSETEDSAFVKS 91
K ED++ ++F + +G G +GSV +A+L DG V + K+ +++ S+ ++
Sbjct: 12 KEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEE 71
Query: 92 FQNEAHVL 99
F EA +
Sbjct: 72 FLREAACM 79
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ A + AL YLH + +V+RDI N++LD + + DFG +
Sbjct: 104 EERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 26/119 (21%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSN-LEAFVADFGTARLLHVDSSNRPYEWALTDTL 164
L YLH T I+H D+ ++N+LL S+ A + DFG A L D L +L
Sbjct: 178 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD--------GLGKSL 226
Query: 165 PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ I G ++ A E+ K D++S + L +L G HP
Sbjct: 227 LTGDYIPGTETHMA--------------PEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 44 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 163
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 164 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 200
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 35/132 (26%)
Query: 95 EAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADFGTARLLHVDS 151
+A + V ++Y+H + IVHRD+ N+LL+S + + DFG + H ++
Sbjct: 133 DAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEA 187
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFG 211
S + + IG Y A P + Y EKCDV+S G
Sbjct: 188 SKK------------MKDKIGTAYYIA-----------PEVLHGTY----DEKCDVWSTG 220
Query: 212 VVALKVLMGTHP 223
V+ +L G P
Sbjct: 221 VILYILLSGCPP 232
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 45/144 (31%)
Query: 90 KSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K F H++ S VA + +L + +HRD+++ NILL + DFG AR +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 148 HVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMV 200
D + P +W +T+ + V
Sbjct: 190 XKDPDXVRKGDARLPLKWMAPETI--------------------------------FDRV 217
Query: 201 VTEKCDVYSFGVVALKVL-MGTHP 223
T + DV+SFGV+ ++ +G P
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 34.3 bits (77), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 45/144 (31%)
Query: 90 KSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K F H++ S VA + +L + +HRD+++ NILL + DFG AR +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 148 HVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMV 200
D + P +W +T+ + V
Sbjct: 199 XKDPDXVRKGDARLPLKWMAPETI--------------------------------FDRV 226
Query: 201 VTEKCDVYSFGVVALKVL-MGTHP 223
T + DV+SFGV+ ++ +G P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 34.3 bits (77), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ A S ++ AL+YLH I++RD+ +N+LLDS + D+G +
Sbjct: 109 EEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 158
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVA 104
++F + IG G Y V L ++ A+K + + D + Q E HV +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 105 HALSYLHHDC 114
H H C
Sbjct: 69 HPFLVGLHSC 78
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLHVDSSN 153
+L+Y+H ++ I HRDI N+LLD + DFG+A++L N
Sbjct: 152 RSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPN 198
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 39/96 (40%), Gaps = 21/96 (21%)
Query: 15 KLNSRAAKNGDVFSVWNYDGKISYEDLINATEEFHIKYC----IGTGGYGSVYKAELPDG 70
KLN N V V DGK E+ I Y IG G +G V++A+L +
Sbjct: 14 KLNPLDDPN-KVIKVLASDGKTG--------EQREIAYTNCKVIGNGSFGVVFQAKLVES 64
Query: 71 KVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAHA 106
VA+KK+ Q K F+N + V H
Sbjct: 65 DEVAIKKVLQD--------KRFKNRELQIMRIVKHP 92
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 166
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 208
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 34.3 bits (77), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 62/162 (38%), Gaps = 55/162 (33%)
Query: 46 EEFHIKYC--IGTGGYGSVYKAE---LPD--GKVVALKKLHQSETE-------DSAFVKS 91
EE H+K+ +G G +GSV L D G+VVA+KKL S E + +KS
Sbjct: 9 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKS 68
Query: 92 FQNEAHVLSTSVAHA----------------------------------LSYLHHDC--- 114
Q++ V V ++ L Y C
Sbjct: 69 LQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 128
Query: 115 ----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
T +HR++++ NIL+++ + DFG ++L D
Sbjct: 129 EYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE 170
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 34.3 bits (77), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 161
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 34.3 bits (77), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 193
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ A S ++ AL+YLH I++RD+ +N+LLDS + D+G +
Sbjct: 120 EEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 169
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVA 104
++F + IG G Y V L ++ A+K + + D + Q E HV +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 105 HALSYLHHDC 114
H H C
Sbjct: 80 HPFLVGLHSC 89
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ A + AL YLH + +V+RDI N++LD + + DFG +
Sbjct: 104 EERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 45/144 (31%)
Query: 90 KSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K F H++ S VA + +L + +HRD+++ NILL + DFG AR +
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 148 HVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMV 200
D + P +W +T+ + V
Sbjct: 190 XKDPDXVRKGDARLPLKWMAPETI--------------------------------FDRV 217
Query: 201 VTEKCDVYSFGVVALKVL-MGTHP 223
T + DV+SFGV+ ++ +G P
Sbjct: 218 YTIQSDVWSFGVLLWEIFSLGASP 241
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 181
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 34.3 bits (77), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 193
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 34.3 bits (77), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 37/139 (26%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS-------------NLEAFVADFGTAR 145
L +A +++LH +L I+HRD+ NIL+ + NL ++DFG +
Sbjct: 138 LLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 146 LLHVDSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKC 205
L DS + L N G + A P +E + +T
Sbjct: 195 KL--DSGQXXFRXNL-------NNPSGTSGWRA-----------PELLEESTKRRLTRSI 234
Query: 206 DVYSFGVVALKVL-MGTHP 223
D++S G V +L G HP
Sbjct: 235 DIFSMGCVFYYILSKGKHP 253
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 34.3 bits (77), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 181
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 34.3 bits (77), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 194
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 34.3 bits (77), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 57 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 176
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 177 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 213
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 25 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 181
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 194
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 37/139 (26%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS-------------NLEAFVADFGTAR 145
L +A +++LH +L I+HRD+ NIL+ + NL ++DFG +
Sbjct: 138 LLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 146 LLHVDSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKC 205
L DS + L N G + A P +E + +T
Sbjct: 195 KL--DSGQXXFRXNL-------NNPSGTSGWRA-----------PELLEESTKRRLTRSI 234
Query: 206 DVYSFGVVALKVL-MGTHP 223
D++S G V +L G HP
Sbjct: 235 DIFSMGCVFYYILSKGKHP 253
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 193
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ A S ++ AL+YLH I++RD+ +N+LLDS + D+G +
Sbjct: 105 EEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 154
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Query: 46 EEFHIKYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVA 104
++F + IG G Y V L ++ A+K + + D + Q E HV +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 105 HALSYLHHDC 114
H H C
Sbjct: 65 HPFLVGLHSC 74
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 37 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 193
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 165
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 194
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 180
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 24 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 180
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 38 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 194
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 34.3 bits (77), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 70/186 (37%), Gaps = 53/186 (28%)
Query: 43 NATEEFHIKYCIGTGGYGSVYKAELP-DGKVVALKKLH-QSETED--------------- 85
+ E F IG G YG VYKA G+VVALKK+ +ETE
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 86 -------------------------SAFVKSFQNEAHVLSTSVAHALSYLHHDC------ 114
S +K F + + + + SYL
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 115 -TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYE-WALTDTLPQVNKIIG 172
+ ++HRD+ N+L+++ +ADFG AR V +E L P++ ++G
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI--LLG 178
Query: 173 CISYYA 178
C YY+
Sbjct: 179 C-KYYS 183
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 8 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 68 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 127
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 128 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 164
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 34.3 bits (77), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ A S ++ AL+YLH I++RD+ +N+LLDS + D+G +
Sbjct: 152 EEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 201
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 34.3 bits (77), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ A + AL YLH + +V+RDI N++LD + + DFG +
Sbjct: 104 EERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 34.3 bits (77), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 56/157 (35%)
Query: 47 EFHIKYCIGTGGYGSVYKA-----------------------ELPDG-----KVVALKKL 78
++ + +G+GG+GSVY ELP+G +VV LKK+
Sbjct: 52 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 79 HQS-----------ETEDSAFVK-----------SFQNEAHVLSTSVAHA-----LSYLH 111
E DS + F E L +A + L +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 112 HDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 208
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 34.3 bits (77), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Query: 81 SETEDSAFVKSFQ-NEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVA 139
E DS K F +AH + L YLH + IVH+DI N+LL + ++
Sbjct: 95 QEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKIS 151
Query: 140 DFGTARLLH 148
G A LH
Sbjct: 152 ALGVAEALH 160
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 34.3 bits (77), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------- 151
S VA +++L + + +HRD+++ NILL + DFG AR + DS
Sbjct: 173 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 152 SNRPYEWALTDTL 164
+ P +W +++
Sbjct: 230 ARLPVKWMAPESI 242
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 34.3 bits (77), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 86 SAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ VK +E + + + L Y+H + I+HRD+ + N+L+ + +ADFG AR
Sbjct: 117 NVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
Query: 146 LLHVDSSNRP 155
+ +++P
Sbjct: 174 AFSLAKNSQP 183
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 34.3 bits (77), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ A + AL YLH + +V+RDI N++LD + + DFG +
Sbjct: 104 EERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 34.3 bits (77), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 45/144 (31%)
Query: 90 KSFQNEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
K F H++ S VA + +L + +HRD+++ NILL + DFG AR +
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 148 HVD-------SSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMV 200
D + P +W +T+ + V
Sbjct: 199 XKDPDXVRKGDARLPLKWMAPETI--------------------------------FDRV 226
Query: 201 VTEKCDVYSFGVVALKVL-MGTHP 223
T + DV+SFGV+ ++ +G P
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASP 250
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 33.9 bits (76), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ A + AL YLH + +V+RDI N++LD + + DFG +
Sbjct: 104 EERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 33.9 bits (76), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 82 ETEDSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADF 141
E E+ V +F++ + VA + +L S VHRD+++ N+L+ + DF
Sbjct: 161 EEEEDLNVLTFED-LLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDF 216
Query: 142 GTARLLHVDS-------SNRPYEWALTDTL 164
G AR + DS + P +W ++L
Sbjct: 217 GLARDIMSDSNYVVRGNARLPVKWMAPESL 246
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 33.9 bits (76), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ A + AL YLH + +V+RDI N++LD + + DFG +
Sbjct: 107 EERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
Query: 68 PDGKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNN 127
PD K++A ED A + +++ VA + YL L VHRD+++ N
Sbjct: 139 PDAKLLA-------GGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRN 188
Query: 128 ILLDSNLEAFVADFGTAR 145
L+ L + DFG +R
Sbjct: 189 CLVGQGLVVKIGDFGMSR 206
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
S VA +++L + + +HRD+++ NILL + DFG AR + DS+
Sbjct: 173 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 223
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------- 151
S VA +++L + + +HRD+++ NILL + DFG AR + DS
Sbjct: 168 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 224
Query: 152 SNRPYEWALTDTL 164
+ P +W +++
Sbjct: 225 ARLPVKWMAPESI 237
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------- 151
S VA +++L + + +HRD+++ NILL + DFG AR + DS
Sbjct: 166 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 222
Query: 152 SNRPYEWALTDTL 164
+ P +W +++
Sbjct: 223 ARLPVKWMAPESI 235
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 98 VLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ + + ++YLH +HR++++ N+LLD++ + DFG A+
Sbjct: 121 LFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 16/85 (18%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSN----------R 154
L+Y H ++HRD+ N+L++ E +ADFG AR + + R
Sbjct: 111 RGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYR 167
Query: 155 PYEWAL--TDTLPQVNKI-IGCISY 176
P + L TD Q++ +GCI Y
Sbjct: 168 PPDILLGSTDYSTQIDMWGVGCIFY 192
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 80 QSETEDSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVA 139
Q++ + +K + + L + L Y+H + +VHRD+ N+ ++ + E +
Sbjct: 112 QTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKIL 168
Query: 140 DFGTARLLHVDSSNRPY 156
DFG AR H D+ Y
Sbjct: 169 DFGLAR--HADAEMTGY 183
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 55/147 (37%), Gaps = 58/147 (39%)
Query: 54 IGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVKSFQNEAHVLST----------- 101
IG G YG V+K D G++VA+KK +SE +D K E +L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 102 -----------------SVAH-----------------------ALSYLH-HDCTLSIVH 120
+V H A+++ H H+C +H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC----IH 125
Query: 121 RDISSNNILLDSNLEAFVADFGTARLL 147
RD+ NIL+ + + DFG ARLL
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARLL 152
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 78/229 (34%), Gaps = 78/229 (34%)
Query: 46 EEFHIKYCIGTGGYGSVYKA-ELPDGKVVALKKLHQSETEDSAFVKSFQNE----AHVLS 100
++F I +G G +G+VY A E +VALK L +S+ E + E AH+
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 101 TSVAHALSY----------------------LHHDCTL---------------------- 116
++ +Y L CT
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGCISY 176
++HRDI N+LL E +ADFG + +H S R D LP
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPP---------- 190
Query: 177 YALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHPGE 225
E+ + EK D++ GV+ ++L+G P E
Sbjct: 191 -----------------EMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
Query: 68 PDGKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNN 127
PD K++A ED A + +++ VA + YL L VHRD+++ N
Sbjct: 116 PDAKLLA-------GGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRN 165
Query: 128 ILLDSNLEAFVADFGTAR 145
L+ L + DFG +R
Sbjct: 166 CLVGQGLVVKIGDFGMSR 183
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 35/132 (26%)
Query: 95 EAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS-NLEAF--VADFGTARLLHVDS 151
+A V+ V +YLH +IVHRD+ N+LL+S + +A + DFG + V
Sbjct: 105 DAAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 161
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFG 211
++ + +G Y A ++++ EKCDV+S G
Sbjct: 162 --------------KMKERLGTAYYIAPEVLRKKYD---------------EKCDVWSCG 192
Query: 212 VVALKVLMGTHP 223
V+ +L G P
Sbjct: 193 VILYILLCGYPP 204
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
++ A + AL YLH + ++V+RD+ N++LD + + DFG +
Sbjct: 250 EDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 33.9 bits (76), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
Query: 68 PDGKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNN 127
PD K++A ED A + +++ VA + YL L VHRD+++ N
Sbjct: 110 PDAKLLA-------GGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRN 159
Query: 128 ILLDSNLEAFVADFGTAR 145
L+ L + DFG +R
Sbjct: 160 CLVGQGLVVKIGDFGMSR 177
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 33.9 bits (76), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
++ A + AL YLH + ++V+RD+ N++LD + + DFG +
Sbjct: 247 EDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 33.9 bits (76), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
L Y+H + +VHRD+ N+ ++ + E + DFG AR H D+ Y
Sbjct: 156 GLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGY 201
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 33.9 bits (76), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
S + A++YL +++ VHRDI+ NIL+ S + DFG +R +
Sbjct: 119 SLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 164
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 33.9 bits (76), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 35/132 (26%)
Query: 95 EAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADFGTARLLHVDS 151
+A + V ++Y+H + IVHRD+ N+LL+S + + DFG + H ++
Sbjct: 127 DAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEA 181
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFG 211
S + + IG Y A P + Y EKCDV+S G
Sbjct: 182 SKK------------MKDKIGTAYYIA-----------PEVLHGTY----DEKCDVWSTG 214
Query: 212 VVALKVLMGTHP 223
V+ +L G P
Sbjct: 215 VILYILLSGCPP 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 33.9 bits (76), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
S + A++YL +++ VHRDI+ NIL+ S + DFG +R +
Sbjct: 115 SLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 160
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
++ A + AL YLH + ++V+RD+ N++LD + + DFG +
Sbjct: 109 EDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
S + A++YL +++ VHRDI+ NIL+ S + DFG +R +
Sbjct: 131 SLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 176
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------- 151
S VA +++L + + +HRD+++ NILL + DFG AR + DS
Sbjct: 150 FSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 152 SNRPYEWALTDTL 164
+ P +W +++
Sbjct: 207 ARLPVKWMAPESI 219
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
++ A + AL YLH + ++V+RD+ N++LD + + DFG +
Sbjct: 108 EDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 54/129 (41%), Gaps = 34/129 (26%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP 155
A+ LST AL+YL + VHRDI++ N+L+ + + DFG +R + DS+
Sbjct: 497 AYQLST----ALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DST--- 545
Query: 156 YEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVAL 215
Y A LP W + N F T DV+ FGV
Sbjct: 546 YYKASKGKLP------------IKWMAPESINFRRF----------TSASDVWMFGVCMW 583
Query: 216 KVLM-GTHP 223
++LM G P
Sbjct: 584 EILMHGVKP 592
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 35/132 (26%)
Query: 95 EAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADFGTARLLHVDS 151
+A + V ++Y+H + IVHRD+ N+LL+S + + DFG + H ++
Sbjct: 151 DAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEA 205
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFG 211
S + + IG Y A P + Y EKCDV+S G
Sbjct: 206 SKK------------MKDKIGTAYYIA-----------PEVLHGTY----DEKCDVWSTG 238
Query: 212 VVALKVLMGTHP 223
V+ +L G P
Sbjct: 239 VILYILLSGCPP 250
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D VADFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
++ A + AL YLH + ++V+RD+ N++LD + + DFG +
Sbjct: 107 EDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 55/132 (41%), Gaps = 35/132 (26%)
Query: 95 EAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADFGTARLLHVDS 151
+A + V ++Y+H + IVHRD+ N+LL+S + + DFG + H ++
Sbjct: 150 DAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEA 204
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFG 211
S + + IG Y A P + Y EKCDV+S G
Sbjct: 205 SKK------------MKDKIGTAYYIA-----------PEVLHGTY----DEKCDVWSTG 237
Query: 212 VVALKVLMGTHP 223
V+ +L G P
Sbjct: 238 VILYILLSGCPP 249
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D VADFG A+
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 190
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D VADFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 33/139 (23%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS-------------NLEAFVADFGTAR 145
L +A +++LH +L I+HRD+ NIL+ + NL ++DFG +
Sbjct: 120 LLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 146 LLHVDSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKC 205
L DS + L N G + A + +NL +T
Sbjct: 177 KL--DSGQSSFRTNL-------NNPSGTSGWRAPELLEESNNLQT-------KRRLTRSI 220
Query: 206 DVYSFGVVALKVL-MGTHP 223
D++S G V +L G HP
Sbjct: 221 DIFSMGCVFYYILSKGKHP 239
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
L Y+H + I+HRD+ +N+ ++ + E + DFG AR
Sbjct: 134 RGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR 171
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D VADFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 33/139 (23%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS-------------NLEAFVADFGTAR 145
L +A +++LH +L I+HRD+ NIL+ + NL ++DFG +
Sbjct: 120 LLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 146 LLHVDSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKC 205
L DS + L N G + A + +NL +T
Sbjct: 177 KL--DSGQXXFRXNL-------NNPSGTSGWRAPELLEESNNLQT-------KRRLTRSI 220
Query: 206 DVYSFGVVALKVL-MGTHP 223
D++S G V +L G HP
Sbjct: 221 DIFSMGCVFYYILSKGKHP 239
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 26/119 (21%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSN-LEAFVADFGTARLLHVDSSNRPYEWALTDTL 164
L YLH + I+H D+ ++N+LL S+ A + DFG A L D L +L
Sbjct: 197 GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPD--------GLGKSL 245
Query: 165 PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ I G ++ A E+ K DV+S + L +L G HP
Sbjct: 246 LTGDYIPGTETHMA--------------PEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 34/129 (26%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP 155
A+ LST AL+YL VHRDI++ N+L+ + + DFG +R + DS+
Sbjct: 117 AYQLST----ALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DST--- 165
Query: 156 YEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVAL 215
Y A LP W + N F T DV+ FGV
Sbjct: 166 YYKASKGKLP------------IKWMAPESINFRRF----------TSASDVWMFGVCMW 203
Query: 216 KVLM-GTHP 223
++LM G P
Sbjct: 204 EILMHGVKP 212
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 144 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGY 193
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 144 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 193
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 104 AHALSYLHHDCTLSIVHRDISSNNILLDSNLE-AFVADFGTARLLHVDSSNRPY 156
++ + H + +VHRDI NIL+D A + DFG+ LLH + PY
Sbjct: 146 GQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH----DEPY 195
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
Q++ ++ +A + YL + VHRD+++ N L+ NL + DFG +R
Sbjct: 127 QSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 188
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 95 EAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLD-----SNLEAFVADFGTARLLHV 149
E L L++LH +L+IVHRD+ +NIL+ ++A ++DFG + L V
Sbjct: 119 EPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
+++A + + YLH+ I+HRDI +N+L+ + +ADFG +
Sbjct: 136 EDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 145 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 194
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 156 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 205
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
+ + + YL + VHRD+++ N+L++S + + DFG + + D
Sbjct: 132 AVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 181
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 184
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 184
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGY 187
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGY 182
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 202
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 182
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 189
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGY 187
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 145 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 194
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D
Sbjct: 162 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD 205
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 145 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 194
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 98 VLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ + + ++YLH +HR +++ N+LLD++ + DFG A+
Sbjct: 115 LFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAK 159
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 152 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 201
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 84/211 (39%), Gaps = 33/211 (15%)
Query: 33 DGKISYEDLINATEEFHIK---YCIGTGG-----YGSVYKAELPDGKVVALKKLHQSETE 84
+ KI+ + LI + I C+ G G Y D V+A+ L
Sbjct: 49 EEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFL 108
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGT 143
D SFQ E ++ AL +H IVHRD+ +N L + L+ + + DFG
Sbjct: 109 DILNSLSFQ-EVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGL 164
Query: 144 ARLLHVDSSNRPYEWALTDTLPQ---VNKIIGCISYYALWFYFQRHNLMPFHVELAYTMV 200
A+ H D+ ++ ++ + NK C+S +R + P +
Sbjct: 165 AQGTH-DTKIELLKFVQSEAQQERCSQNKCSICLS--------RRQQVAPRAGTPGFRAP 215
Query: 201 -VTEKC-------DVYSFGVVALKVLMGTHP 223
V KC D++S GV+ L +L G +P
Sbjct: 216 EVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 156 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGY 205
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 182
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 182
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
+ + + YL + VHRD+++ N+L++S + + DFG + + D
Sbjct: 120 AVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 169
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 202
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 182
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 182
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 182
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 66 ELPDGKVVALKKLHQSETEDSAFVKSF--QNEAHVLSTSVAHALSYLHHDCTLSIVHRDI 123
E P+ + ++ + E D K F + +A L V A+ YLH + IVHRD+
Sbjct: 90 ESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHR---MGIVHRDL 146
Query: 124 SSNNILL---DSNLEAFVADFGTARL 146
N+L D + ++DFG +++
Sbjct: 147 KPENLLYYSQDEESKIMISDFGLSKM 172
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 152 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 201
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 98 VLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ + + ++YLH +HR +++ N+LLD++ + DFG A+
Sbjct: 116 LFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAK 160
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 130 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 179
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 182
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 187
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 184
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 182
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 132 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 181
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 131 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 180
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 143 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 192
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 182
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 178
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 130 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 179
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 182
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 60/155 (38%), Gaps = 42/155 (27%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS----NRPYE 157
V+ + YL + VHR++++ N+LL + A ++DFG ++ L D S +
Sbjct: 444 QVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 500
Query: 158 WALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKV 217
W L P+ CI++ + + DV+S+GV +
Sbjct: 501 WPLKWYAPE------CINFRKF----------------------SSRSDVWSYGVTMWEA 532
Query: 218 L-MGTHPGEXXXXXXXXXGPKIMLIDVLDQRLSPP 251
L G P GP++M +R+ P
Sbjct: 533 LSYGQKP------YKKMKGPEVMAFIEQGKRMECP 561
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 178
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 27/111 (24%)
Query: 119 VHRDISSNNILLDSNLEAFVADFGTAR--LLHVDSSNRPY---EWALTDTLPQVNKIIGC 173
HRD+ NILL + + D G+ +HV+ S + +WA
Sbjct: 156 AHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC---------T 206
Query: 174 ISYYAL-WFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
ISY A F Q H V+ E+ DV+S G V ++ G P
Sbjct: 207 ISYRAPELFSVQSH------------CVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 138 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 187
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D
Sbjct: 153 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD 196
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
+ + V+ + AL++LH + I+HRD+ + N+L+ + +ADFG +
Sbjct: 116 EPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD 176
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 107 LSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
L + H + I+HRD+ +NI++ S+ + DFG AR + PY
Sbjct: 134 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPY 183
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
+ + V+ + AL++LH + I+HRD+ + N+L+ + +ADFG +
Sbjct: 108 EPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVS 156
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 178
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
L Y+H + I+HRD+ +N+ ++ + E + DFG AR
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
L Y+H + I+HRD+ +N+ ++ + E + DFG AR
Sbjct: 142 RGLKYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD 176
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ YLH + ++HRD+ +NILL++ VADFG +R
Sbjct: 121 VIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 188
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD 176
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR
Sbjct: 140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSS 152
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D
Sbjct: 129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDE 174
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGY 188
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 58/155 (37%)
Query: 46 EEFHIKYCIGTGGYGSVYKA-ELPDGKVVALKKLHQS----------------------- 81
+ + I++ IGTG YG V +A + + +VVA+KK+ +
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 82 ------------------------ETEDSAFVKSFQNEAHVLSTSVAHAL-------SYL 110
E DS F K F+ ++ + L Y+
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 111 HHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
H + I+HRD+ N L++ + V DFG AR
Sbjct: 173 H---SAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTAR 145
+HRD+++ N L+D +L V+DFG R
Sbjct: 124 QFIHRDLAARNCLVDRDLCVKVSDFGMTR 152
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
++ L + L Y+H I+HRD+ N+ ++ + E + DFG AR
Sbjct: 127 EDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 95 EAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
E ++ L+YLH + +++HRD+ + NILL + DFG+A ++
Sbjct: 155 EIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
D VKSF + + L + H + +++HRD+ N+L++ N E +A+FG A
Sbjct: 99 DPEIVKSFLFQ-------LLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLA 148
Query: 145 R 145
R
Sbjct: 149 R 149
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 135 QILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGY 184
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL------HVDSSN 153
+ VA + YL + +HRD+++ N+LL + + DFG R L +V +
Sbjct: 117 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 154 R--PYEWALTDTL 164
R P+ W ++L
Sbjct: 174 RKVPFAWCAPESL 186
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG AR H D Y
Sbjct: 139 QILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGY 188
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR + PY
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPY 185
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL------HVDSSN 153
+ VA + YL + +HRD+++ N+LL + + DFG R L +V +
Sbjct: 127 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 183
Query: 154 R--PYEWALTDTL 164
R P+ W ++L
Sbjct: 184 RKVPFAWCAPESL 196
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 38/163 (23%)
Query: 69 DGKVVAL--KKLHQSETEDSAFVKSF--QNEAHVLSTSVAHALSYLHHDCTLSIVHRDIS 124
DGK V L + + E D + F + EA + ++ + YLH + +VHRD+
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH---SQGVVHRDLK 148
Query: 125 SNNILL---DSNLEAF-VADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGCISYYALW 180
+NIL N E + DFG A+ L + N ++ Y A +
Sbjct: 149 PSNILYVDESGNPECLRICDFGFAKQLRAE-----------------NGLLMTPCYTANF 191
Query: 181 FYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ P E+ E CD++S G++ +L G P
Sbjct: 192 -------VAP---EVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 133 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 192
Query: 159 ALTDTLPQVNKIIGCISYYALW 180
P+V +G LW
Sbjct: 193 TRYYRAPEVILGMGYKENVDLW 214
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL------HVDSSN 153
+ VA + YL + +HRD+++ N+LL + + DFG R L +V +
Sbjct: 121 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 154 R--PYEWALTDTL 164
R P+ W ++L
Sbjct: 178 RKVPFAWCAPESL 190
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 15/102 (14%)
Query: 56 TGGYGSVYKA----ELPDGKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAHA----- 106
+ G+ V + E PD V+ L++ E + F E L +A +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILER-----PEPVQDLFDFITERGALQEELARSFFWQV 166
Query: 107 LSYLHHDCTLSIVHRDISSNNILLDSNL-EAFVADFGTARLL 147
L + H ++HRDI NIL+D N E + DFG+ LL
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 208
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL------HVDSSN 153
+ VA + YL + +HRD+++ N+LL + + DFG R L +V +
Sbjct: 117 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 154 R--PYEWALTDTL 164
R P+ W ++L
Sbjct: 174 RKVPFAWCAPESL 186
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 95 EAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL 147
E ++ L+YLH + +++HRD+ + NILL + DFG+A ++
Sbjct: 116 EIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 165
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 38/163 (23%)
Query: 69 DGKVVAL--KKLHQSETEDSAFVKSF--QNEAHVLSTSVAHALSYLHHDCTLSIVHRDIS 124
DGK V L + + E D + F + EA + ++ + YLH + +VHRD+
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH---SQGVVHRDLK 148
Query: 125 SNNILL---DSNLEAF-VADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGCISYYALW 180
+NIL N E + DFG A+ L + N ++ Y A +
Sbjct: 149 PSNILYVDESGNPECLRICDFGFAKQLRAE-----------------NGLLMTPCYTANF 191
Query: 181 FYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ P E+ E CD++S G++ +L G P
Sbjct: 192 -------VAP---EVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEW 158
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVV 181
Query: 159 ALTDTLPQVNKIIGCISYYALW 180
P+V +G LW
Sbjct: 182 TRYYRAPEVILGMGYKENVDLW 203
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLL------HVDSSN 153
+ VA + YL + +HRD+++ N+LL + + DFG R L +V +
Sbjct: 121 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 154 R--PYEWALTDTL 164
R P+ W ++L
Sbjct: 178 RKVPFAWCAPESL 190
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 48/119 (40%), Gaps = 26/119 (21%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSN-LEAFVADFGTARLLHVDSSNRPYEWALTDTL 164
L YLH + I+H D+ ++N+LL S+ A + DFG A L D L L
Sbjct: 178 GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPD--------GLGKDL 226
Query: 165 PQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVLMGTHP 223
+ I G ++ A E+ K DV+S + L +L G HP
Sbjct: 227 LTGDYIPGTETHMA--------------PEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 186
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ +A + ++ L +LH I++RD+ +N++LDS +ADFG +
Sbjct: 119 EPQAVFYAAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK 168
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 118 IVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
I+HRD+ N LL+ + + DFG AR ++ D
Sbjct: 152 IIHRDLKPANCLLNQDCSVKICDFGLARTINSD 184
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 179
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 185
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 138 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 184
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 121 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY 178
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 31/125 (24%)
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPYEWALTD 162
+A + YL + + +HRD+++ N +L ++ VADFG ++ ++ S Y
Sbjct: 156 IALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIY---SGDYYRQGRIA 209
Query: 163 TLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVVALKVL---M 219
+P + + A +E V T K DV++FGV ++ M
Sbjct: 210 KMP--------VKWIA--------------IESLADRVYTSKSDVWAFGVTMWEIATRGM 247
Query: 220 GTHPG 224
+PG
Sbjct: 248 TPYPG 252
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 121 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 178
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR---- 154
++ +A ++YL+ + VHRD+++ N ++ + + DFG R + R
Sbjct: 128 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 184
Query: 155 ---PYEWALTDTL 164
P W ++L
Sbjct: 185 GLLPVRWMSPESL 197
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+ A + + AL +LH I++RD+ +N+LLD +ADFG +
Sbjct: 123 EARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 185
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 122 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 179
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR---- 154
++ +A ++YL+ + VHRD+++ N ++ + + DFG R + R
Sbjct: 137 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 193
Query: 155 ---PYEWALTDTL 164
P W ++L
Sbjct: 194 GLLPVRWMSPESL 206
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 128 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY 185
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 128 MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY 185
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 85 DSAFVKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADF 141
D+ FV S +H + + AL Y H + +I+HRD+ N+LL S + + DF
Sbjct: 122 DAGFVYSEAVASHYMR-QILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDF 177
Query: 142 GTA 144
G A
Sbjct: 178 GVA 180
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 129 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 175
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 186
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR----- 154
+ VA + YL + +HRD+++ N+LL + + DFG R L + +
Sbjct: 127 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 183
Query: 155 ---PYEWALTDTL 164
P+ W ++L
Sbjct: 184 RKVPFAWCAPESL 196
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 129 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 186
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 185
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 127 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 184
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 185
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 166 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 223
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
++ +A ++YL+ + VHRD+++ N ++ + + DFG R
Sbjct: 130 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 185
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 94 NEAHVLSTSVAHA-LSYL--------HHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
N + V+ + H +SYL H + I+HRD+ +NI++ S+ + DFG A
Sbjct: 114 NLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Query: 145 RLLHVDSSNRPY 156
R PY
Sbjct: 174 RTAGTSFMMTPY 185
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 130 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK 176
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 94 NEAHVLSTSVAHA-LSYL--------HHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
N + V+ + H +SYL H + I+HRD+ +NI++ S+ + DFG A
Sbjct: 114 NLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Query: 145 RLLHVDSSNRPY 156
R PY
Sbjct: 174 RTAGTSFMMTPY 185
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY 185
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 136 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++YL+ + VHRD+++ N ++ + + DFG R ++
Sbjct: 137 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 183
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY 185
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 11/73 (15%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR----- 154
+ VA + YL + +HRD+++ N+LL + + DFG R L + +
Sbjct: 117 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 173
Query: 155 ---PYEWALTDTL 164
P+ W ++L
Sbjct: 174 RKVPFAWCAPESL 186
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY 185
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+S + L + H + I+HRD+ +NI++ S+ + DFG AR
Sbjct: 130 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
++ +A ++YL+ + VHRD+++ N ++ + + DFG R
Sbjct: 134 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 164 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 94 NEAHVLSTSVAHA-LSYL--------HHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
N + V+ + H +SYL H + I+HRD+ +NI++ S+ + DFG A
Sbjct: 114 NLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Query: 145 RLLHVDSSNRPY 156
R PY
Sbjct: 174 RTAGTSFMMTPY 185
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
++ +A ++YL+ + VHRD+++ N ++ + + DFG R
Sbjct: 136 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++YL+ + VHRD+++ N ++ + + DFG R ++
Sbjct: 143 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 164 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLH 148
++ +A ++YL+ + VHRD+++ N ++ + + DFG R ++
Sbjct: 143 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 136 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
++ +A ++YL+ + VHRD+++ N ++ + + DFG R
Sbjct: 136 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+S + L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY 185
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 164 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
++ +A ++YL+ + VHRD+++ N ++ + + DFG R
Sbjct: 133 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+L+D V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 22/124 (17%)
Query: 99 LSTSVAHALSYLHHDC-----TLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSN 153
L+ S L +LH + +I HRD+ S NIL+ N +AD G A D++
Sbjct: 139 LAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE 198
Query: 154 RPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFGVV 213
D P N +G Y + N F +Y M D+YSFG++
Sbjct: 199 -------VDIPP--NTRVGTKRYMPPEVLDESLNRNHFQ---SYIMA-----DMYSFGLI 241
Query: 214 ALKV 217
+V
Sbjct: 242 LWEV 245
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+S + L + H + I+HRD+ +NI++ S+ + DFG AR
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 107 LSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
L + H + I+HRD+ +NI++ S+ + DFG AR PY
Sbjct: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 223
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+S + L + H + I+HRD+ +NI++ S+ + DFG AR
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
+S + L + H + I+HRD+ +NI++ S+ + DFG AR
Sbjct: 128 MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + D+G AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEMTGY 182
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
++ +A ++YL+ + VHRD+++ N ++ + + DFG R
Sbjct: 165 MAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 35/132 (26%)
Query: 95 EAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDS---NLEAFVADFGTARLLHVDS 151
+A + V ++Y H + IVHRD+ N+LL+S + + DFG + H ++
Sbjct: 127 DAARIIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS--THFEA 181
Query: 152 SNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYSFG 211
S + + IG Y A P + Y EKCDV+S G
Sbjct: 182 SKKXKDK------------IGTAYYIA-----------PEVLHGTY----DEKCDVWSTG 214
Query: 212 VVALKVLMGTHP 223
V+ +L G P
Sbjct: 215 VILYILLSGCPP 226
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 91 SFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
FQ + T A +S L H +I++RD+ N+LLD + ++D G A
Sbjct: 285 GFQEPRAIFYT--AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 91 SFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
FQ + T A +S L H +I++RD+ N+LLD + ++D G A
Sbjct: 285 GFQEPRAIFYT--AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 91 SFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
FQ + T A +S L H +I++RD+ N+LLD + ++D G A
Sbjct: 285 GFQEPRAIFYT--AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 91 SFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
FQ + T A +S L H +I++RD+ N+LLD + ++D G A
Sbjct: 285 GFQEPRAIFYT--AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.6 bits (70), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+++D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK 189
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+++D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK 189
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+++D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+++D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+++D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK 189
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+++D V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+++D V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+++D V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD------SS 152
+ V A+ YL + +HRD+++ N L++ V+DFG +R + D S
Sbjct: 125 MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGS 181
Query: 153 NRPYEWALTDTL 164
P W+ + L
Sbjct: 182 KFPVRWSPPEVL 193
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD------SS 152
+ V A+ YL + +HRD+++ N L++ V+DFG +R + D S
Sbjct: 125 MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 181
Query: 153 NRPYEWALTDTL 164
P W+ + L
Sbjct: 182 KFPVRWSPPEVL 193
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+++D V DFG A+
Sbjct: 144 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD--SSNR-- 154
+ V A+ YL + +HRD+++ N L++ V+DFG +R + D +S+R
Sbjct: 110 MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGS 166
Query: 155 --PYEWALTDTL 164
P W+ + L
Sbjct: 167 KFPVRWSPPEVL 178
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
+ V A+ YL + +HRD+++ N L++ V+DFG +R + D S
Sbjct: 105 MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 161
Query: 153 NRPYEWALTDTL 164
P W+ + L
Sbjct: 162 KFPVRWSPPEVL 173
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR---- 154
++ +A ++YL+ VHRD+++ N ++ + + DFG R ++ + R
Sbjct: 135 MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGK 191
Query: 155 ---PYEWALTDTL 164
P W ++L
Sbjct: 192 GLLPVRWMAPESL 204
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
+ V A+ YL + +HRD+++ N L++ V+DFG +R + D S
Sbjct: 109 MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 165
Query: 153 NRPYEWALTDTL 164
P W+ + L
Sbjct: 166 KFPVRWSPPEVL 177
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD------SS 152
+ V A+ YL + +HRD+++ N L++ V+DFG +R + D S
Sbjct: 116 MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 172
Query: 153 NRPYEWALTDTL 164
P W+ + L
Sbjct: 173 KFPVRWSPPEVL 184
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 31.2 bits (69), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDS------S 152
+ V A+ YL + +HRD+++ N L++ V+DFG +R + D S
Sbjct: 110 MCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 166
Query: 153 NRPYEWALTDTL 164
P W+ + L
Sbjct: 167 KFPVRWSPPEVL 178
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 31.2 bits (69), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 118 IVHRDISSNNILLDSNLEAFVADFGTARLLH 148
I+HRD+ N LL+ + V DFG AR ++
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 94 NEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
E H + + +A L +L + I++RD+ +N++LDS +ADFG +
Sbjct: 119 KEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 169
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 96 AHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + + YLH +L +++RD+ N+++D V DFG A+
Sbjct: 143 ARFYAAQIVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK 189
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
L++ H + I+HRD+ N+L++ + + DFG AR
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR---- 154
++ +A ++YL+ VHRD+++ N ++ + + DFG R + R
Sbjct: 132 MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 188
Query: 155 ---PYEWALTDTL 164
P W ++L
Sbjct: 189 GLLPVRWMAPESL 201
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR---- 154
++ +A ++YL+ VHRD+++ N ++ + + DFG R + R
Sbjct: 135 MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 191
Query: 155 ---PYEWALTDTL 164
P W ++L
Sbjct: 192 GLLPVRWMAPESL 204
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 30.8 bits (68), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR---- 154
++ +A ++YL+ VHRD+++ N ++ + + DFG R + R
Sbjct: 135 MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 191
Query: 155 ---PYEWALTDTL 164
P W ++L
Sbjct: 192 GLLPVRWMAPESL 204
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 30.8 bits (68), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 69 DGKVV--ALKKLHQSETEDSAFVKSF--QNEAHVLSTSVAHALSYLHHDCTLSIVHRDIS 124
DGK V + + E D + F + EA + ++ + YLH +VHRD+
Sbjct: 87 DGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLK 143
Query: 125 SNNILL---DSNLEAF-VADFGTARLLHVDSS 152
+NIL N E+ + DFG A+ L ++
Sbjct: 144 PSNILYVDESGNPESIRICDFGFAKQLRAENG 175
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 30.8 bits (68), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLL 147
A+ ++H +L I HRDI N+L++S + DFG+A+ L
Sbjct: 152 RAVGFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKL 192
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 30.8 bits (68), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DFG R H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEMTGY 182
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 30.8 bits (68), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
++ +A ++YL+ + VHRD+++ N + + + DFG R
Sbjct: 130 MAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 30.8 bits (68), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
H L LH +VHRD+ NILL N + + DF AR D++ Y
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHY 193
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 30.8 bits (68), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR---- 154
++ +A ++YL+ VHRD+++ N ++ + + DFG R ++ R
Sbjct: 134 MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 155 ---PYEWALTDTL 164
P W ++L
Sbjct: 191 GLLPVRWMAPESL 203
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 30.8 bits (68), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 117 SIVHRDISSNNILLDSNLEAFVADFGTARLL 147
+I+HRDI NIL+ + + DFG AR L
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTL 174
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 30.4 bits (67), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 94 NEAHVL--STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
E H + + +A L +L + I++RD+ +N++LDS +ADFG +
Sbjct: 440 KEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 490
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 30.4 bits (67), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 105 HALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
H L LH +VHRD+ NILL N + + DF AR D++ Y
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHY 193
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 30.4 bits (67), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTA 144
S + L + H + +VHRD+ N+LL S L+ +ADFG A
Sbjct: 124 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA 171
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR---- 154
++ +A ++YL+ VHRD+++ N ++ + + DFG R ++ R
Sbjct: 135 MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGK 191
Query: 155 ---PYEWALTDTL 164
P W ++L
Sbjct: 192 GLLPVRWMAPESL 204
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 30.4 bits (67), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 50/134 (37%), Gaps = 23/134 (17%)
Query: 92 FQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSN--LEAFVADFGTARLLHV 149
F ++S + S LH+ I HRDI N L +N E + DFG ++ +
Sbjct: 163 FVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYK 222
Query: 150 DSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVYS 209
++ Y P YF ++ E +Y KCD +S
Sbjct: 223 LNNGEYYGMTTKAGTP----------------YFVAPEVLNTTNE-SY----GPKCDAWS 261
Query: 210 FGVVALKVLMGTHP 223
GV+ +LMG P
Sbjct: 262 AGVLLHLLLMGAVP 275
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + FG AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEMTGY 182
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILL---DSNLEAF-VADFGTARLLH 148
+ EA + ++ + YLH +VHRD+ +NIL N E+ + DFG A+ L
Sbjct: 115 EREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171
Query: 149 VDSS 152
++
Sbjct: 172 AENG 175
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
+ + L LH + IV+RD+ NILLD + ++D G A
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
AL Y H + I+HRD+ +N+++D L + D+G A H
Sbjct: 137 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 177
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
AL Y H + I+HRD+ +N+++D L + D+G A H
Sbjct: 137 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 177
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
AL Y H + I+HRD+ +N+++D L + D+G A H
Sbjct: 137 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 177
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
AL Y H + I+HRD+ +N+++D L + D+G A H
Sbjct: 137 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 177
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
AL Y H + I+HRD+ +N+++D L + D+G A H
Sbjct: 158 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 198
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
AL Y H + I+HRD+ +N+++D L + D+G A H
Sbjct: 137 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 177
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
AL Y H + I+HRD+ +N+++D L + D+G A H
Sbjct: 138 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 178
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
AL Y H + I+HRD+ +N+++D L + D+G A H
Sbjct: 139 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 179
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
AL Y H + I+HRD+ +N+++D L + D+G A H
Sbjct: 137 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 177
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
AL Y H + I+HRD+ +N+++D L + D+G A H
Sbjct: 138 ALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 178
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + YL C +HRD+++ N L+ ++DFG +R
Sbjct: 222 AAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 47 EFHIKYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAH 105
+F + IG GG+G VY D GK+ A+K L D +K Q E L+ +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL------DKKRIKMKQGETLALNERIML 243
Query: 106 AL 107
+L
Sbjct: 244 SL 245
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Query: 103 VAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
A + YL C +HRD+++ N L+ ++DFG +R
Sbjct: 222 AAAGMEYLESKCC---IHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 47 EFHIKYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAH 105
+F + IG GG+G VY D GK+ A+K L D +K Q E L+ +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL------DKKRIKMKQGETLALNERIML 243
Query: 106 AL 107
+L
Sbjct: 244 SL 245
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 47 EFHIKYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAH 105
+F + IG GG+G VY D GK+ A+K L D +K Q E L+ +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL------DKKRIKMKQGETLALNERIML 243
Query: 106 AL 107
+L
Sbjct: 244 SL 245
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 47 EFHIKYCIGTGGYGSVYKAELPD-GKVVALKKLHQSETEDSAFVKSFQNEAHVLSTSVAH 105
+F + IG GG+G VY D GK+ A+K L D +K Q E L+ +
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCL------DKKRIKMKQGETLALNERIML 242
Query: 106 AL 107
+L
Sbjct: 243 SL 244
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + D G AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEMTGY 182
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTA 144
+ + L LH + IV+RD+ NILLD + ++D G A
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + D G AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEMTGY 182
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 50/130 (38%), Gaps = 25/130 (19%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRP-YEWAL 160
A+ ++H I+HRD+ N+LL + + DFG+A + S+ P Y W+
Sbjct: 144 QTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI----SHYPDYSWSA 198
Query: 161 TDTLPQVNKIIGCISYYALWFYFQRHNLMPFH-----VELAYTMVVTEKCDVYSFGVVAL 215
+I N P + ++L + EK D+++ G +
Sbjct: 199 QRRALVEEEIT--------------RNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY 244
Query: 216 KVLMGTHPGE 225
+ HP E
Sbjct: 245 LLCFRQHPFE 254
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSN 133
V L YLH C I+H DI NILL N
Sbjct: 154 QVLQGLDYLHTKC--RIIHTDIKPENILLSVN 183
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + D G AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEMTGY 182
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSN 133
V L YLH C I+H DI NILL N
Sbjct: 138 QVLQGLDYLHTKC--RIIHTDIKPENILLSVN 167
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 54 IGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVKSFQNEAHV 98
IG+GG+G V+KA+ DGK +K++ + + VK+ HV
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHV 64
>pdb|3RS1|A Chain A, Mouse C-Type Lectin-Related Protein Clrg
pdb|3RS1|B Chain B, Mouse C-Type Lectin-Related Protein Clrg
Length = 122
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 134 LEAFVADFGTARLLHVDSSNRPYEWALTDTLPQVNKIIGCISY 176
L+ F DF + LH +SS P++W +N I+G Y
Sbjct: 55 LKRFKGDFDSWIGLHRESSEHPWKWTNNTEYNNMNPILGVGRY 97
>pdb|3TYK|A Chain A, Crystal Structure Of Aminoglycoside Phosphotransferase
Aph(4)-Ia
Length = 362
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 98 VLSTSVAHALSYLH---HDC--TLSIVHRDISSNNILLDSNLEAFVADFGTA 144
+S SVA AL L DC +VH D SNN+L D+ V D+ A
Sbjct: 190 TVSASVAQALDELXLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEA 241
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
+ AL Y H ++ I+HRD+ +N+L+D + D+G A H
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYH 183
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 118 IVHRDISSNNILLDSNLEAFVADFGTARLLH 148
I+HRDI NI++ + + DFG+A L
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYLE 181
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 52/137 (37%), Gaps = 36/137 (26%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF--VADFG--TARLLH 148
++EA + +SY H + + HRD+ N LLD + +ADFG A +LH
Sbjct: 114 EDEARFFFQQLISGVSYAH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLH 170
Query: 149 VDSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVY 208
Q +G +Y A ++ Y V DV+
Sbjct: 171 S----------------QPKSAVGTPAYIAPEVLLKKE----------YDGKV---ADVW 201
Query: 209 SFGVVALKVLMGTHPGE 225
S GV +L+G +P E
Sbjct: 202 SCGVTLYVMLVGAYPFE 218
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNRPY 156
+ L Y+H + I+HRD+ +N+ ++ + E + DF AR H D Y
Sbjct: 133 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMTGY 182
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 43 NATEEFHIKYCIGTGGYGSVYKAE-LPDGKVVALKKLH 79
N F I+ IG G + VY+A L DG VALKK+
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQ 66
>pdb|3R8E|A Chain A, Crystal Structure Of A Hypothetical Sugar Kinase
(Chu_1875) From Cytophaga Hutchinsonii Atcc 33406 At
1.65 A Resolution
Length = 321
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 13 TPKLNSRAAKNGDVFS--VWNYDGKISYEDLINATEEFHIKYCIGTGGYGSVYKAELPDG 70
+PK+ + A GD + VW G I E L+N + + GG + +P+
Sbjct: 222 SPKVIADHAAQGDALALAVWADIGTIIGESLVNIVRVXDLNNILLGGGISGAFDYFVPNL 281
Query: 71 KVVALKKLHQSETEDSAFVK-SFQNEAHVLSTS 102
K L+ L T+D K + +N+A +L +
Sbjct: 282 KKAXLEHLPTYYTDDXYIGKATLENDAGLLGAA 314
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFG 142
+ E V+ + A++Y+H + HRD+ N+L D + + DFG
Sbjct: 107 EEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFG 153
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 83 TEDSAFVKSFQNEAHV--LSTSVAHALSYL--HHDCTLSIVHRDISSNNILLDSNLEAFV 138
T+D VKS L +A + YL HH +VH+D+++ N+L+ L +
Sbjct: 132 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKI 186
Query: 139 ADFGTAR 145
+D G R
Sbjct: 187 SDLGLFR 193
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
+ AL Y H ++ I+HRD+ +N+++D + D+G A H
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
Query: 83 TEDSAFVKSFQNEAHV--LSTSVAHALSYL--HHDCTLSIVHRDISSNNILLDSNLEAFV 138
T+D VKS L +A + YL HH +VH+D+++ N+L+ L +
Sbjct: 115 TDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKI 169
Query: 139 ADFGTAR 145
+D G R
Sbjct: 170 SDLGLFR 176
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
+ AL Y H ++ I+HRD+ +N+++D + D+G A H
Sbjct: 137 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 181
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR 154
+A A+ +LH + ++HRD+ +NI + V DFG + D +
Sbjct: 126 QIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
+ AL Y H ++ I+HRD+ +N+++D + D+G A H
Sbjct: 144 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 188
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
+ AL Y H ++ I+HRD+ +N+++D + D+G A H
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 36/137 (26%)
Query: 93 QNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF--VADFGTAR--LLH 148
++EA + +SY H ++ I HRD+ N LLD + + DFG ++ +LH
Sbjct: 115 EDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 171
Query: 149 VDSSNRPYEWALTDTLPQVNKIIGCISYYALWFYFQRHNLMPFHVELAYTMVVTEKCDVY 208
Q +G +Y A ++ + ++A DV+
Sbjct: 172 S----------------QPKSTVGTPAYIAPEVLLRQE----YDGKIA---------DVW 202
Query: 209 SFGVVALKVLMGTHPGE 225
S GV +L+G +P E
Sbjct: 203 SCGVTLYVMLVGAYPFE 219
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
+ AL Y H ++ I+HRD+ +N+++D + D+G A H
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
+ AL Y H ++ I+HRD+ +N+++D + D+G A H
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
+ AL Y H ++ I+HRD+ +N+++D + D+G A H
Sbjct: 138 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
+ AL Y H ++ I+HRD+ +N+++D + D+G A H
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
+ AL Y H ++ I+HRD+ +N+++D + D+G A H
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVDSSNR 154
+A A+ +LH + ++HRD+ +NI + V DFG + D +
Sbjct: 172 QIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 221
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
+ AL Y H ++ I+HRD+ +N+++D + D+G A H
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
+ AL Y H ++ I+HRD+ +N+++D + D+G A H
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTA 144
S + L + H + +VHRD+ N+LL S + +ADFG A
Sbjct: 106 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
+ AL Y H ++ I+HRD+ +N+++D + D+G A H
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
+ AL Y H ++ I+HRD+ +N+++D + D+G A H
Sbjct: 138 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 54 IGTGGYGSVYKAE-LPDGKVVALKKLHQSETEDSAFVKSFQNEAHV 98
IG+GG+G V+KA+ DGK ++++ + + VK+ HV
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHV 65
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 99 LSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTARLLHVD 150
L + + Y+H + ++HRD+ +NI L + + DFG L D
Sbjct: 141 LFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 189
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
+ AL Y H ++ I+HRD+ +N+++D + D+G A H
Sbjct: 139 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 183
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
++ AL +LH I++RD+ NI+L+ + DFG +
Sbjct: 129 EISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 102 SVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVADFGTAR 145
++ AL +LH I++RD+ NI+L+ + DFG +
Sbjct: 129 EISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 45 TEEFHIKYCIGTGGYGSVYKA-ELPDGKVVALKK----LHQSETEDSAFVKSFQNEAHVL 99
T EFH IG+G +GSV+K + DG + A+K+ L S E +A + + AH +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVY---AHAV 64
Query: 100 STSVAHALSYL 110
+H + Y
Sbjct: 65 LGQHSHVVRYF 75
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 45 TEEFHIKYCIGTGGYGSVYKA-ELPDGKVVALKK----LHQSETEDSAFVKSFQNEAHVL 99
T EFH IG+G +GSV+K + DG + A+K+ L S E +A + + AH +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVY---AHAV 66
Query: 100 STSVAHALSYL 110
+H + Y
Sbjct: 67 LGQHSHVVRYF 77
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 45 TEEFHIKYCIGTGGYGSVYKA-ELPDGKVVALKK----LHQSETEDSAFVKSFQNEAHVL 99
T EFH IG+G +GSV+K + DG + A+K+ L S E +A + + AH +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVY---AHAV 64
Query: 100 STSVAHALSYL 110
+H + Y
Sbjct: 65 LGQHSHVVRYF 75
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 45 TEEFHIKYCIGTGGYGSVYKA-ELPDGKVVALKK----LHQSETEDSAFVKSFQNEAHVL 99
T EFH IG+G +GSV+K + DG + A+K+ L S E +A + + AH +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVY---AHAV 62
Query: 100 STSVAHALSYL 110
+H + Y
Sbjct: 63 LGQHSHVVRYF 73
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTA 144
S + L + H + +VHR++ N+LL S L+ +ADFG A
Sbjct: 113 SHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
AL Y H + I+HRD+ +N+++D + + D+G A H
Sbjct: 149 ALDYCH---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH 189
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 27.7 bits (60), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 106 ALSYLHHDCTLSIVHRDISSNNILLDSNLEAF-VADFGTARLLH 148
AL Y H + I+HRD+ +N+++D + + D+G A H
Sbjct: 144 ALDYCH---SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH 184
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 112 HDCTLSIVHRDISSNNILL---DSNLEAFVADFGTARLLHVDSSNRPY 156
H ++++ HRDI +N+L+ D L+ + DFG+A+ L N Y
Sbjct: 146 HLPSVNVCHRDIKPHNVLVNEADGTLK--LCDFGSAKKLSPSEPNVAY 191
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 94 NEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAFVA--DFGTARLLHVDS 151
+EA V++ + A L H SIVH DI NI+ ++ + V DFG A L+ D
Sbjct: 147 SEAEVINY-MRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 100 STSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTA 144
S + L ++H IVHRD+ N+LL S + +ADFG A
Sbjct: 133 SHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 89 VKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTA 144
+ + +EA S + L ++H IVHRD+ N+LL S + +ADFG A
Sbjct: 96 AREYYSEADA-SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 27.3 bits (59), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 89 VKSFQNEAHVLSTSVAHALSYLHHDCTLSIVHRDISSNNILLDSNLEAF---VADFGTA 144
+ + +EA S + L ++H IVHRD+ N+LL S + +ADFG A
Sbjct: 96 AREYYSEADA-SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,547,608
Number of Sequences: 62578
Number of extensions: 303756
Number of successful extensions: 2168
Number of sequences better than 100.0: 998
Number of HSP's better than 100.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 241
Number of HSP's that attempted gapping in prelim test: 904
Number of HSP's gapped (non-prelim): 1496
length of query: 257
length of database: 14,973,337
effective HSP length: 97
effective length of query: 160
effective length of database: 8,903,271
effective search space: 1424523360
effective search space used: 1424523360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)