Your job contains 1 sequence.
>039074
MALSLRSLFFSPLLKIPSPKLTPPTTNVIISLNKTPKSRKCHAVTDRSSTSTVGDHKVLV
GPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCY
QDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVK
ESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPI
SHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELV
DSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMG
FLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPA
VVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLS
VVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRRL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039074
(534 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2047329 - symbol:TIC55-II "translocon at the i... 2012 4.6e-208 1
TAIR|locus:2082122 - symbol:ACD1 "ACCELERATED CELL DEATH ... 415 3.3e-47 2
TAIR|locus:2131406 - symbol:ACD1-LIKE "AT4G25650" species... 318 1.7e-35 3
TAIR|locus:2823671 - symbol:CH1 "CHLORINA 1" species:3702... 292 3.5e-23 1
UNIPROTKB|Q48IV9 - symbol:vanA "Vanillate monooxygenase, ... 215 2.0e-15 2
UNIPROTKB|Q4KB09 - symbol:vanA "Vanillate O-demethylase, ... 195 7.5e-13 2
UNIPROTKB|Q8G8B6 - symbol:carAa "Carbazole 1,9a-dioxygena... 190 4.9e-12 1
UNIPROTKB|D5IGG0 - symbol:carAa "Carbazole 1,9a-dioxygena... 186 1.3e-11 1
ZFIN|ZDB-GENE-040718-356 - symbol:zgc:92275 "zgc:92275" s... 183 4.7e-11 1
UNIPROTKB|P71875 - symbol:kshA "3-ketosteroid-9-alpha-mon... 179 8.6e-11 1
UNIPROTKB|Q4KAM4 - symbol:prnD "Aminopyrrolnitrin oxidase... 174 2.7e-10 1
UNIPROTKB|F1NKZ9 - symbol:LOC427775 "Uncharacterized prot... 168 1.7e-09 1
WB|WBGene00007536 - symbol:daf-36 species:6239 "Caenorhab... 149 2.4e-07 1
TIGR_CMR|BA_2145 - symbol:BA_2145 "nitrite reductase [NAD... 126 3.2e-07 1
TIGR_CMR|SPO_3681 - symbol:SPO_3681 "Rieske 2Fe-2S domain... 132 1.4e-05 1
TIGR_CMR|GSU_0845 - symbol:GSU_0845 "Rieske 2Fe-2S family... 99 0.00026 1
TIGR_CMR|CPS_4029 - symbol:CPS_4029 "iron-sulfur cluster-... 121 0.00029 1
TIGR_CMR|GSU_3238 - symbol:GSU_3238 "Rieske 2Fe-2S family... 97 0.00042 1
ASPGD|ASPL0000005442 - symbol:AN10836 species:162425 "Eme... 119 0.00051 1
UNIPROTKB|Q3C1D5 - symbol:tphA2II "Terephthalate 1,2-diox... 118 0.00059 1
UNIPROTKB|Q3C1E3 - symbol:tphA2I "Terephthalate 1,2-dioxy... 118 0.00059 1
TIGR_CMR|SPO_1590 - symbol:SPO_1590 "Rieske 2Fe-2S domain... 116 0.00078 1
>TAIR|locus:2047329 [details] [associations]
symbol:TIC55-II "translocon at the inner envelope
membrane of chloroplasts 55-II" species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0010277
"chlorophyllide a oxygenase [overall] activity" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0051537 "2
iron, 2 sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0045036 "protein targeting
to chloroplast" evidence=IMP] InterPro:IPR013626 InterPro:IPR017941
Pfam:PF00355 Pfam:PF08417 PROSITE:PS51296 GO:GO:0016021
EMBL:CP002685 GO:GO:0046872 GO:GO:0009941 GO:GO:0009706
GO:GO:0051537 EMBL:AC006585 Gene3D:2.102.10.10 SUPFAM:SSF50022
UniGene:At.22189 UniGene:At.69630 eggNOG:COG4638 GO:GO:0010277
GO:GO:0045036 EMBL:AK221423 IPI:IPI00540398 PIR:H84640
RefSeq:NP_180055.1 ProteinModelPortal:Q9SK50 SMR:Q9SK50
STRING:Q9SK50 PRIDE:Q9SK50 EnsemblPlants:AT2G24820.1 GeneID:817019
KEGG:ath:AT2G24820 TAIR:At2g24820 HOGENOM:HOG000239564
InParanoid:Q9SK50 OMA:KCVKIPQ PhylomeDB:Q9SK50
ProtClustDB:CLSN2683134 Genevestigator:Q9SK50 Uniprot:Q9SK50
Length = 539
Score = 2012 (713.3 bits), Expect = 4.6e-208, P = 4.6e-208
Identities = 369/487 (75%), Positives = 405/487 (83%)
Query: 49 STSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIV 108
S T G VL+ P EE+R E VADYDWTEEWYPLYLTK+VP+DAPLGLTV+D+QIV
Sbjct: 58 SDQTEGGGDVLLNPE--EEKRVE--VADYDWTEEWYPLYLTKNVPEDAPLGLTVYDRQIV 113
Query: 109 LYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKI 168
LYKDG G LRCY+DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPA AKI
Sbjct: 114 LYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPASAKI 173
Query: 169 PRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSIL 228
P++ACV+TYEVK+SQGVVWVWMS KTPPNP+KLPWFENFARPGF D+ST HELPYDHSIL
Sbjct: 174 PKAACVKTYEVKDSQGVVWVWMSTKTPPNPEKLPWFENFARPGFFDISTTHELPYDHSIL 233
Query: 229 LENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPL-PNFLRF 287
LENLMDPAH+PISHDRTD+TAKREDAQPL FEVTER++RGFAG WG+EK+ N LRF
Sbjct: 234 LENLMDPAHVPISHDRTDFTAKREDAQPLVFEVTERSNRGFAGTWGREKEGGKGSNLLRF 293
Query: 288 EAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYF 347
+APCVLQNNRE + K G K+YF+GLFLCRPTGQGKSMLIVRFG TKRSPL + P+W++
Sbjct: 294 DAPCVLQNNREF-EGKDGVKNYFSGLFLCRPTGQGKSMLIVRFGVTKRSPLVSVLPQWFW 352
Query: 348 HQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYH 407
HQNA KVFEQDMGFLSSQNEVLMKE VPTK+LYLNL+SSDTWVAEYRKWMDKVGHGMPYH
Sbjct: 353 HQNACKVFEQDMGFLSSQNEVLMKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHGMPYH 412
Query: 408 FGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSS 467
FGH TISLPKVP VVEHAPAGL+A +SAS PAKG IGTMHAPNLANRYFRH+IHC+ CS+
Sbjct: 413 FGHRTISLPKVPPVVEHAPAGLIAALSASYPAKGGIGTMHAPNLANRYFRHIIHCRSCSN 472
Query: 468 VIKAFSTWKNXXXXXXXXXXXXXXXXXGRQWKAFXXXXXXXXXXGVYACSTAIAMNTTNF 527
VIK+F WKN RQWKA Y C AI +NT NF
Sbjct: 473 VIKSFELWKNILSATAVALTALAILVVSRQWKAVLLGSAALCSAAAYTCLRAINLNTNNF 532
Query: 528 IRTHRRL 534
IRTHRRL
Sbjct: 533 IRTHRRL 539
>TAIR|locus:2082122 [details] [associations]
symbol:ACD1 "ACCELERATED CELL DEATH 1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0010277 "chlorophyllide a oxygenase [overall] activity"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009706
"chloroplast inner membrane" evidence=TAS] [GO:0032441
"pheophorbide a oxygenase activity" evidence=IDA] [GO:0051536
"iron-sulfur cluster binding" evidence=ISS] [GO:0009908 "flower
development" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0015996 "chlorophyll catabolic process"
evidence=IMP] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
[GO:0008219 "cell death" evidence=IMP] [GO:0009816 "defense
response to bacterium, incompatible interaction" evidence=IMP]
InterPro:IPR013626 InterPro:IPR017941 Pfam:PF00355 Pfam:PF08417
PROSITE:PS51296 UniPathway:UPA00674 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008219 GO:GO:0022900
GO:GO:0051536 GO:GO:0009706 GO:GO:0051537 GO:GO:0009908
GO:GO:0010154 GO:GO:0009816 Gene3D:2.102.10.10 SUPFAM:SSF50022
GO:GO:0009534 eggNOG:COG4638 GO:GO:0010277 EMBL:AL391254
GO:GO:0015996 EMBL:U77347 EMBL:AY344061 EMBL:AY093092
IPI:IPI00530021 PIR:T51785 RefSeq:NP_190074.1 UniGene:At.21728
UniGene:At.36095 ProteinModelPortal:Q9FYC2 SMR:Q9FYC2 STRING:Q9FYC2
PaxDb:Q9FYC2 PRIDE:Q9FYC2 EnsemblPlants:AT3G44880.1 GeneID:823622
KEGG:ath:AT3G44880 TAIR:At3g44880 HOGENOM:HOG000239731
InParanoid:Q9FYC2 KO:K13071 OMA:VVYATPI PhylomeDB:Q9FYC2
ProtClustDB:PLN02518 BioCyc:ARA:AT3G44880-MONOMER
BioCyc:MetaCyc:AT3G44880-MONOMER BRENDA:1.14.12.20
Genevestigator:Q9FYC2 GermOnline:AT3G44880 GO:GO:0032441
GO:GO:0016630 Uniprot:Q9FYC2
Length = 537
Score = 415 (151.1 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 119/396 (30%), Positives = 194/396 (48%)
Query: 15 KIPSPKLTPPTTNVIISLNKTP-KSRKCHAVTDRSSTSTVGDHKVLVGPASAEERRGERQ 73
KIP PTT + ++ +P +S+ H ++ +V EE G+++
Sbjct: 20 KIP---FLSPTTKFPLKVSISPSRSKLFHNPLRVAAPPSVPTSDSTEEKRIEEEYGGDKE 76
Query: 74 V--ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRLAK 130
+++ W + WYP+ L +D+ + P + + +VL+ D N + + D CPHRLA
Sbjct: 77 EEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLAP 136
Query: 131 LSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACVRTYEVKESQ 183
LSEG+L + G L+C YHGW F G G C +IPQ K PR AC + SQ
Sbjct: 137 LSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPR-ACAIKFPTMVSQ 195
Query: 184 GVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHI 238
G+++VW + P +LP ++F +P F V+ +L Y + L+EN+ DP+HI
Sbjct: 196 GLLFVWPDENGWDRANSIEPPRLP--DDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHI 253
Query: 239 PISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRE 298
+H + T +R+ A+PL F+V GF G D P +F APC N E
Sbjct: 254 DFAHHKV--TGRRDRAKPLPFKVESSGPWGFQGA---NDDSPRIT-AKFVAPCYSMNKIE 307
Query: 299 LVDSK---TGEKHYFTGLFLCR---PTGQGKSMLIV---R--FGATKRSPLA-KLFPKWY 346
L D+K G + + +++C P GK+ IV R F + P ++ P+WY
Sbjct: 308 L-DAKLPIVGNQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVPRWY 364
Query: 347 FHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLN 382
H ++ V++ DM L Q +V + +++ + + +N
Sbjct: 365 EHWTSNLVYDGDMIVLQGQEKVFLAKSMESPDYDVN 400
Score = 96 (38.9 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 24/92 (26%), Positives = 47/92 (51%)
Query: 340 KLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLR---------SSDTWV 390
++ P+WY H ++ V++ DM L Q +V + +++ + + +N + +D +V
Sbjct: 358 QVVPRWYEHWTSNLVYDGDMIVLQGQEKVFLAKSMESPDYDVNKQYTKLTFTPTQADRFV 417
Query: 391 AEYRKWMDKVGHGMPYHFGHSTISLPKVPAVV 422
+R W+ + G P FG ST S +P+ V
Sbjct: 418 LAFRNWLRRHGKSQPEWFG-STPSNQPLPSTV 448
>TAIR|locus:2131406 [details] [associations]
symbol:ACD1-LIKE "AT4G25650" species:3702 "Arabidopsis
thaliana" [GO:0009055 "electron carrier activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0010277
"chlorophyllide a oxygenase [overall] activity" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0051537 "2
iron, 2 sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR013626 InterPro:IPR017941 Pfam:PF00355
Pfam:PF08417 PROSITE:PS51296 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0015031 GO:GO:0009941
EMBL:AL161563 GO:GO:0009706 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 EMBL:AL050400 eggNOG:COG4638 GO:GO:0010277
HOGENOM:HOG000239731 EMBL:AY344062 EMBL:AF424575 EMBL:AY056168
EMBL:AY062731 EMBL:BT002586 IPI:IPI00516579 PIR:T09557
RefSeq:NP_567725.1 RefSeq:NP_849444.1 UniGene:At.3350
ProteinModelPortal:Q8W496 STRING:Q8W496 PaxDb:Q8W496 PRIDE:Q8W496
EnsemblPlants:AT4G25650.2 GeneID:828670 KEGG:ath:AT4G25650
GeneFarm:3092 TAIR:At4g25650 InParanoid:Q8W496 OMA:VYPSTVQ
PhylomeDB:Q8W496 ProtClustDB:CLSN2689607 Genevestigator:Q8W496
Uniprot:Q8W496
Length = 559
Score = 318 (117.0 bits), Expect = 1.7e-35, Sum P(3) = 1.7e-35
Identities = 78/235 (33%), Positives = 115/235 (48%)
Query: 18 SPKLTPPTTNVIISLNKTPKSRKCHAVTDRSSTSTVGDHKVLVGPASAEERRGERQVADY 77
+P L P + N +I+ K+ SR AV+ S+S P + E ++ +
Sbjct: 28 NPSL-PISPNSLIT-RKS--SRFTTAVSSPPSSSAATSTNSPPEPEALFEPGSDK----F 79
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-ELRCYQDRCPHRLAKLSEGQL 136
DW WYP+ D+ P G V +V++ D N + + D CPHRLA LS+G++
Sbjct: 80 DWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRI 139
Query: 137 ID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIP----RSACVRTYEVKESQGVVWVWMS 191
GRL+C+YHGW F G G C IPQ P D P + ACV Y ++W W +
Sbjct: 140 DQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGP-PVHTFKQACVAVYPSTVQHEIIWFWPN 198
Query: 192 Q----KTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
K +K P+ P F + ++PY + +L+ENLMDPAH+P +H
Sbjct: 199 SDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAH 253
Score = 114 (45.2 bits), Expect = 1.7e-35, Sum P(3) = 1.7e-35
Identities = 39/166 (23%), Positives = 72/166 (43%)
Query: 251 REDAQPLGFEVTERTDRGFAGR--WGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE-- 306
RE +PL V + ++GF + WG NF+ APCV +++ + + + E
Sbjct: 291 REGGKPLEINVKKLDNKGFFSKQEWGYS------NFI---APCVYRSSTDPLPEQEHEYP 341
Query: 307 -----------KHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVF 355
K + +F+C P G+S LI F + K+ P+W FH + +
Sbjct: 342 APAASDKAALSKRRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPRWVFHIGQNTIL 401
Query: 356 EQDMGFLSSQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKWMDK 399
+ D+ L + +++ K ++ +S D V +R+W +K
Sbjct: 402 DSDLHLLHVEERKILERGPENWQKACFIPTKS-DANVVTFRRWFNK 446
Score = 45 (20.9 bits), Expect = 1.7e-35, Sum P(3) = 1.7e-35
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 451 LANRYFRHVIHCKGCSSVIK 470
L +RY+ HV +C C K
Sbjct: 472 LFDRYWSHVENCSSCKKAHK 491
>TAIR|locus:2823671 [details] [associations]
symbol:CH1 "CHLORINA 1" species:3702 "Arabidopsis
thaliana" [GO:0005506 "iron ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;ISS;IDA] [GO:0010277 "chlorophyllide a
oxygenase [overall] activity" evidence=IEA;IDA;IMP] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016705 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0015995 "chlorophyll biosynthetic
process" evidence=RCA;IMP] [GO:0009706 "chloroplast inner membrane"
evidence=IDA] [GO:0042651 "thylakoid membrane" evidence=IDA]
[GO:0009073 "aromatic amino acid family biosynthetic process"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0019344 "cysteine biosynthetic process" evidence=RCA]
[GO:0030154 "cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR013626 InterPro:IPR015881 InterPro:IPR017941
Pfam:PF00355 Pfam:PF08417 PROSITE:PS51296 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005506 GO:GO:0009706 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0009535 GO:GO:0042651
GO:GO:0016705 EMBL:AB021316 EMBL:AF177200 EMBL:AB030565
EMBL:AC084807 EMBL:AY128357 EMBL:BT002075 IPI:IPI00519476
IPI:IPI00521014 IPI:IPI00532566 PIR:T52458 RefSeq:NP_175088.1
RefSeq:NP_973969.1 RefSeq:NP_973970.1 UniGene:At.19047
ProteinModelPortal:Q9MBA1 SMR:Q9MBA1 STRING:Q9MBA1 PaxDb:Q9MBA1
PRIDE:Q9MBA1 EnsemblPlants:AT1G44446.1 GeneID:841029
KEGG:ath:AT1G44446 TAIR:At1g44446 eggNOG:COG4638
HOGENOM:HOG000012389 InParanoid:Q9MBA1 KO:K13600 OMA:QCATHLH
PhylomeDB:Q9MBA1 ProtClustDB:PLN02281 BioCyc:ARA:AT1G44446-MONOMER
BioCyc:MetaCyc:AT1G44446-MONOMER BRENDA:1.13.12.14
Genevestigator:Q9MBA1 GermOnline:AT1G44446 GO:GO:0010277
GO:GO:0015995 Uniprot:Q9MBA1
Length = 536
Score = 292 (107.8 bits), Expect = 3.5e-23, P = 3.5e-23
Identities = 99/386 (25%), Positives = 173/386 (44%)
Query: 28 VIISLNKTPKSRKCHAVT-DRSSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPL 86
V+ L+K S AV DR T+T + GP + ++ WYP+
Sbjct: 174 VVTELDKPSSSTTASAVELDREKTNTGAKSLNVSGPVPPYSPH----LKNF-----WYPV 224
Query: 87 YLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYH 146
T D+ D + + F+Q V+++ +G+ C ++ C HR L G + +GR++C YH
Sbjct: 225 AFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYH 284
Query: 147 GWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFE 205
GW++ +G+C K+P KI C+ E +G++W+W + PP P LP +
Sbjct: 285 GWEYSTDGECKKMPSTKLLKVKIKSLPCL------EQEGMIWIWPGDE-PPAPI-LPSLQ 336
Query: 206 NFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTER 264
GF + +LP +H +LL+NL+D AH P +H T AK L +T
Sbjct: 337 --PPSGFLIHAELVMDLPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFLTPT 392
Query: 265 TDRGFAGRWGKEK-D-EPLPNFLRFEAPCVLQNNRELVDSKTGEK--HYFTGLFLCRPTG 320
+ G G W D E P + + + + ++ K+ ++ + L +C P+
Sbjct: 393 S--GLQGYWDPYPIDMEFKPPCIVLSTIGISKPGK--LEGKSTQQCATHLHQLHVCLPSS 448
Query: 321 QGKSMLIVRFGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKE 378
+ K+ L+ R + +P+ K P + + A +V +D+ + Q E ++
Sbjct: 449 KNKTRLLYRM-SLDFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQERMLNGA----N 503
Query: 379 LYLNLRSS-DTWVAEYRKWMDKVGHG 403
++ NL + D YR W + V G
Sbjct: 504 IW-NLPVAYDKLGVRYRLWRNAVDRG 528
>UNIPROTKB|Q48IV9 [details] [associations]
symbol:vanA "Vanillate monooxygenase, oxygenase subunit"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0018489 "vanillate monooxygenase activity" evidence=ISS]
[GO:0042190 "vanillin catabolic process" evidence=ISS]
InterPro:IPR015881 InterPro:IPR017941 Pfam:PF00355 PROSITE:PS00570
PROSITE:PS51296 GO:GO:0005506 GO:GO:0051537 EMBL:CP000058
GenomeReviews:CP000058_GR Gene3D:2.102.10.10 SUPFAM:SSF50022
eggNOG:COG4638 RefSeq:YP_274672.1 ProteinModelPortal:Q48IV9
STRING:Q48IV9 GeneID:3557872 KEGG:psp:PSPPH_2475 PATRIC:19974231
HOGENOM:HOG000218715 KO:K03862 OMA:YGFIWVW ProtClustDB:CLSK868980
GO:GO:0018489 GO:GO:0042190 Uniprot:Q48IV9
Length = 354
Score = 215 (80.7 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 49/175 (28%), Positives = 85/175 (48%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T D D PLG + ++++V Y+D N ++ +D CPHR A LS G + +G+L
Sbjct: 7 WY-VACTADEVADKPLGRQICNERMVFYRDQNQQVVALEDFCPHRGAPLSLGYVENGQLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG G+GK +P ++ C +T+ E G +WVW + +P +
Sbjct: 66 CGYHGLVMGGDGKTAAMP----GQRVRGFPCNKTFAAVERYGFIWVWPGDREKADPALIH 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPL 257
E + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 HLEWAVSDEWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAAPV 176
Score = 41 (19.5 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 353 KVFEQDMGFLSSQNEVLMKETVPTKELY-LNLRSSDTWVAEYRKWMDKV 400
K+F +D+ L Q + L++ P + L LN+ D + RK ++++
Sbjct: 293 KIFSEDLEMLERQQQNLLQH--PQRNLLKLNI---DAGGVQSRKILERL 336
>UNIPROTKB|Q4KB09 [details] [associations]
symbol:vanA "Vanillate O-demethylase, oxygenase subunit"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006725 "cellular
aromatic compound metabolic process" evidence=ISS] [GO:0018489
"vanillate monooxygenase activity" evidence=ISS] InterPro:IPR015881
InterPro:IPR017941 Pfam:PF00355 PROSITE:PS00570 PROSITE:PS51296
GO:GO:0005506 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0008168 GO:GO:0006725
eggNOG:COG4638 HOGENOM:HOG000218715 KO:K03862 OMA:YGFIWVW
ProtClustDB:CLSK868980 GO:GO:0018489 RefSeq:YP_260574.1
ProteinModelPortal:Q4KB09 STRING:Q4KB09 GeneID:3475505
KEGG:pfl:PFL_3471 PATRIC:19876285
BioCyc:PFLU220664:GIX8-3486-MONOMER Uniprot:Q4KB09
Length = 352
Score = 195 (73.7 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 52/179 (29%), Positives = 83/179 (46%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T D PLG + + +V Y+ G + +D CPHR A LS G + +G L
Sbjct: 7 WY-VACTPDELQGKPLGRQICGEHMVFYRAHEGRVTAVEDFCPHRGAPLSLGYVENGNLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP---D 199
C YHG +GK V++P ++ C +T+ E G +WVW + +P
Sbjct: 66 CGYHGLVMGCDGKTVEMP----GQRVRGFPCNKTFAAVERYGFIWVWPGDQALADPALIH 121
Query: 200 KLPWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
L W +N +A G H + D+ ++++NLMD H H + + ++A P
Sbjct: 122 HLEWADNDQWAYGG----GLFH-IQCDYRLMIDNLMDLTHETYVHASSIGQKEIDEAPP 175
Score = 40 (19.1 bits), Expect = 7.5e-13, Sum P(2) = 7.5e-13
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 349 QNASKVFEQDMGFLSSQNEVLMKETVPTKELY-LNL 383
+ K+F +D+ L Q + L+ + P + L LN+
Sbjct: 289 EGQGKIFSEDLEMLERQQQNLLAQ--PQRNLLKLNI 322
>UNIPROTKB|Q8G8B6 [details] [associations]
symbol:carAa "Carbazole 1,9a-dioxygenase, terminal
oxygenase component CarAa" species:53412 "Pseudomonas resinovorans"
[GO:0018564 "carbazole 1,9a-dioxygenase activity" evidence=IDA]
[GO:0046232 "carbazole catabolic process" evidence=IDA] [GO:0051537
"2 iron, 2 sulfur cluster binding" evidence=IDA] InterPro:IPR017941
Pfam:PF00355 PROSITE:PS51296 GO:GO:0046872 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 EMBL:AB047548 EMBL:AB088420
RefSeq:NP_758566.1 RefSeq:NP_758567.1 ProteinModelPortal:Q8G8B6
SMR:Q8G8B6 GeneID:1047040 ProtClustDB:CLSK641757 GO:GO:0018564
GO:GO:0046232 InterPro:IPR021028 Pfam:PF11723 Uniprot:Q8G8B6
Length = 384
Score = 190 (71.9 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 54/189 (28%), Positives = 90/189 (47%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
A + WYP+ +K++ + P L + + +++ + +G+L C +DRC HR +LS
Sbjct: 21 AKLGFRNHWYPVMFSKEIDEGEPKTLKLLGENLLVNRI-DGKLYCLKDRCLHRGVQLSVK 79
Query: 135 QLIDGR--LECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMS 191
+ + C YH W + E G I P A+I R ++TY V+E++G V++++
Sbjct: 80 VECKTKSTITCWYHAWTYRWEDGVLCDILTNPTSAQIGRQK-LKTYPVQEAKGCVFIYLG 138
Query: 192 QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKR 251
PP P NF + + + + + +EN DP+HI I D K
Sbjct: 139 DGDPP-PLARDTPPNFLDDDMEILGKNQIIKSNWRLAVENGFDPSHIYIHKDSI--LVKD 195
Query: 252 ED-AQPLGF 259
D A PLGF
Sbjct: 196 NDLALPLGF 204
>UNIPROTKB|D5IGG0 [details] [associations]
symbol:carAa "Carbazole 1,9a-dioxygenase, terminal
oxygenase component CarAa" species:28214 "Sphingomonas sp."
[GO:0018564 "carbazole 1,9a-dioxygenase activity" evidence=ISS]
[GO:0046232 "carbazole catabolic process" evidence=IDA] [GO:0051537
"2 iron, 2 sulfur cluster binding" evidence=ISS] InterPro:IPR017941
Pfam:PF00355 PROSITE:PS51296 GO:GO:0046872 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0018564 GO:GO:0046232
InterPro:IPR021028 Pfam:PF11723 EMBL:GU123624
BioCyc:MetaCyc:MONOMER-15737 Uniprot:D5IGG0
Length = 378
Score = 186 (70.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 60/209 (28%), Positives = 100/209 (47%)
Query: 62 PASAEERRG--ERQV-ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELR 118
P+ AE R E + A + WYP+ L ++ + P+ + + ++I+L + G G++
Sbjct: 5 PSIAERRTKVWEPYIRAKLGFRNHWYPVRLASEIAEGTPVPVKLLGEKILLNRVG-GKVY 63
Query: 119 CYQDRCPHRLAKLSEGQLIDGR--LECLYHGWQFE-GEGKCVKIPQLPADAKIPRSACVR 175
QDRC HR LS+ + + C YHGW + +G+ V I P +I R A ++
Sbjct: 64 AIQDRCLHRGVTLSDRVECYSKNTISCWYHGWTYRWDDGRLVDILTNPGSVQIGRRA-LK 122
Query: 176 TYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTI----HELPYDHSIL-LE 230
T+ V+E++G+++V++ P P E+ PGF D + H L + L E
Sbjct: 123 TFPVEEAKGLIFVYVGDGEPT-----PLIEDVP-PGFLDENRAIHGQHRLVASNWRLGAE 176
Query: 231 NLMDPAHIPISHDRTDWTAKREDAQPLGF 259
N D H+ I H + + PLGF
Sbjct: 177 NGFDAGHVLI-HKNSILVKGNDIILPLGF 204
>ZFIN|ZDB-GENE-040718-356 [details] [associations]
symbol:zgc:92275 "zgc:92275" species:7955 "Danio
rerio" [GO:0055114 "oxidation-reduction process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0051537 "2
iron, 2 sulfur cluster binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] InterPro:IPR017941 Pfam:PF00355 PROSITE:PS51296
ZFIN:ZDB-GENE-040718-356 GO:GO:0046872 GO:GO:0016491 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 eggNOG:COG4638
GeneTree:ENSGT00390000016856 HOGENOM:HOG000018897 OMA:VWFHCDG
EMBL:BX005379 EMBL:BC075979 EMBL:AB607951 IPI:IPI00482212
RefSeq:NP_001002612.1 UniGene:Dr.31637 Ensembl:ENSDART00000049036
GeneID:436885 KEGG:dre:436885 HOVERGEN:HBG061330 InParanoid:Q6DHJ3
OrthoDB:EOG4V437V NextBio:20831313 Uniprot:Q6DHJ3
Length = 460
Score = 183 (69.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 63/225 (28%), Positives = 98/225 (43%)
Query: 64 SAEERRGERQVADYD--WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQ 121
+A E R R+ + + WY + + + +TV QQ+ +++ +G+
Sbjct: 102 AANEVRRRRKTGELPPVYPNGWYRVLDSHMLERGDVKSVTVLGQQVAVFRGQDGKAYVVD 161
Query: 122 DRCPHRLAKLSEG-QLIDGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEV 179
CPH A L+ G +++ G +EC +HGWQF G +G+CVKIP AD K+P A VR +
Sbjct: 162 AYCPHLGANLAVGGRVVGGCIECPFHGWQFRGVDGRCVKIPY--AD-KVPEFAKVRCWPS 218
Query: 180 KESQGVVWVWMSQKTPPNPDKLPWFENFARPGF-QDVSTIHELPYDHSILLENLMDPAHI 238
E G+V VW ++P R + T H + + EN D AH+
Sbjct: 219 CEINGLVLVWFHCDGLEPSWRVPEQSQITRGEWVYRGRTEHFINAHIEEIPENAADIAHL 278
Query: 239 PISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPN 283
+H T D + + E + W K EP PN
Sbjct: 279 --AHLHTPGIVSGVDLRYTNSKTWEFIRHDWKVEW---KPEPEPN 318
>UNIPROTKB|P71875 [details] [associations]
symbol:kshA "3-ketosteroid-9-alpha-monooxygenase oxygenase
subunit" species:1773 "Mycobacterium tuberculosis" [GO:0005506
"iron ion binding" evidence=IDA] [GO:0006707 "cholesterol catabolic
process" evidence=IDA] [GO:0009405 "pathogenesis" evidence=IDA]
[GO:0047086 "ketosteroid monooxygenase activity" evidence=IDA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IDA]
[GO:0070207 "protein homotrimerization" evidence=IPI] [GO:0070723
"response to cholesterol" evidence=IEP] InterPro:IPR017941
Pfam:PF00355 PROSITE:PS51296 UniPathway:UPA00062 GO:GO:0009405
GenomeReviews:AL123456_GR GO:GO:0006694 GO:GO:0005506 EMBL:BX842583
GO:GO:0006707 GO:GO:0070723 GO:GO:0051537 GO:GO:0070207
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0047086 eggNOG:COG4638
PIR:G70674 RefSeq:NP_218043.1 RefSeq:YP_006517014.1 PDB:2ZYL
PDBsum:2ZYL ProteinModelPortal:P71875 SMR:P71875 PRIDE:P71875
EnsemblBacteria:EBMYCT00000003502 GeneID:13317133 GeneID:888268
KEGG:mtu:Rv3526 KEGG:mtv:RVBD_3526 PATRIC:18156454
TubercuList:Rv3526 HOGENOM:HOG000052102 KO:K15982 OMA:GSNCREI
ProtClustDB:CLSK872190 BioCyc:MetaCyc:MONOMER-16885
EvolutionaryTrace:P71875 GO:GO:0036200 Uniprot:P71875
Length = 386
Score = 179 (68.1 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 43/164 (26%), Positives = 78/164 (47%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+ L + KD + P G+ F ++V++ D +G+L+ C H LSEG + +
Sbjct: 26 WHCLGVAKDYLEGKPHGVEAFGTKLVVFADSHGDLKVLDGYCRHMGGDLSEGTVKGDEVA 85
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK-TPPNPD-K 200
C +H W++ G+G+C +P + PR A R++ G+++VW + PP+P +
Sbjct: 86 CPFHDWRWGGDGRCKLVPYA---RRTPRMARTRSWTTDVRSGLLFVWHDHEGNPPDPAVR 142
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSI--LLENLMDPAHIPISH 242
+P A + D L + +++N+ D AH H
Sbjct: 143 IPEIPEAASDEWTDWRWNRILIEGSNCRDIIDNVTDMAHFFYIH 186
>UNIPROTKB|Q4KAM4 [details] [associations]
symbol:prnD "Aminopyrrolnitrin oxidase PrnD" species:220664
"Pseudomonas protegens Pf-5" [GO:0003824 "catalytic activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019748 "secondary metabolic process" evidence=ISS]
InterPro:IPR017941 Pfam:PF00355 PROSITE:PS51296 GO:GO:0003824
GO:GO:0046872 GO:GO:0016491 EMBL:CP000076 GenomeReviews:CP000076_GR
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0019748
eggNOG:COG4638 RefSeq:YP_260709.1 ProteinModelPortal:Q4KAM4
STRING:Q4KAM4 GeneID:3475640 KEGG:pfl:PFL_3607 PATRIC:19876573
HOGENOM:HOG000250326 OMA:AFETTTA ProtClustDB:CLSK715065
BioCyc:MetaCyc:MONOMER-16709 BioCyc:PFLU220664:GIX8-3622-MONOMER
Uniprot:Q4KAM4
Length = 363
Score = 174 (66.3 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 37/120 (30%), Positives = 61/120 (50%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + D P LT+F + V ++ G+ C H A L++G++ DG ++
Sbjct: 29 WYVAMRSNGLRDK-PKELTLFGRPYVAWRAATGQAVVMDRHCSHLGANLADGRIKDGCIQ 87
Query: 143 CLYHGWQFEGEGKCVKIP---QLPADAK-IPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
C +H W+++ +GKCV IP ++ + +PR+A T E G VWVW P +P
Sbjct: 88 CPFHHWRYDEQGKCVHIPGHSEVVRQLEPVPRAARQPTLVTTERYGYVWVWYGSPQPLHP 147
>UNIPROTKB|F1NKZ9 [details] [associations]
symbol:LOC427775 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051537 "2 iron,
2 sulfur cluster binding" evidence=IEA] InterPro:IPR017941
Pfam:PF00355 PROSITE:PS51296 GO:GO:0046872 GO:GO:0016491
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022
GeneTree:ENSGT00390000016856 OMA:VWFHCDG EMBL:AADN02026957
IPI:IPI00604040 Ensembl:ENSGALT00000014454 Uniprot:F1NKZ9
Length = 409
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 54/196 (27%), Positives = 84/196 (42%)
Query: 60 VGPASA-EERRGERQVA-DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL 117
+GP+ RR R A + WY + + +P A L + +++ ++ +G+
Sbjct: 47 LGPSRGLSARRSRRPGALPPPYPNGWYRVLDSAQLPRGAVRSLALLGERLAAFRTQDGQA 106
Query: 118 RCYQDRCPHRLAKLSEGQLIDGR-LECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVR 175
CPH A L+ G + G +EC +HGW+F GE GKC IP K+P A VR
Sbjct: 107 HVVDAYCPHLGADLAAGGRVVGSCIECPFHGWRFRGEDGKCTHIPYA---GKVPDFAKVR 163
Query: 176 TYEVKESQGVVWVWM-------SQKTPPNPDKLP--WFENFARPGFQDVSTIHELPYDHS 226
++ E G++ +W + P P+ + W F D I E+P
Sbjct: 164 SWPCCEVNGMLLLWYHCDGTGPAWAVPEQPEIITGDWVFRGQTEHFVDAH-IQEIP---- 218
Query: 227 ILLENLMDPAHIPISH 242
EN D AH+ H
Sbjct: 219 ---ENAADTAHLAFLH 231
>WB|WBGene00007536 [details] [associations]
symbol:daf-36 species:6239 "Caenorhabditis elegans"
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0051537 "2
iron, 2 sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017941 Pfam:PF00355 PROSITE:PS51296 GO:GO:0005737
GO:GO:0046872 GO:GO:0016491 GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 EMBL:Z73969 eggNOG:COG4638 PIR:T19219
RefSeq:NP_505629.2 ProteinModelPortal:Q17938 SMR:Q17938
STRING:Q17938 PaxDb:Q17938 EnsemblMetazoa:C12D8.5 GeneID:179422
KEGG:cel:CELE_C12D8.5 UCSC:C12D8.5 CTD:179422 WormBase:C12D8.5
GeneTree:ENSGT00390000016856 HOGENOM:HOG000018897 InParanoid:Q17938
OMA:VWFHCDG UniPathway:UPA01020 NextBio:905318 Uniprot:Q17938
Length = 428
Score = 149 (57.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 48/189 (25%), Positives = 81/189 (42%)
Query: 72 RQVADYD--WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLA 129
R+V D + WY + ++ + ++ + +TV Q + L + +G + CPH A
Sbjct: 68 RRVGDMPPVFPNGWYCVCESEKLANNQIMEITVLGQFLSLIRSESGAVYITDSYCPHIGA 127
Query: 130 KLSEGQLI--DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVV 186
+ G + D ++C +HGW F E GKCV++P + +IP A V T+ E +
Sbjct: 128 NFNIGGRVVRDNCIQCPFHGWIFSAETGKCVEVPY--DEGRIPEQAKVTTWPCIERNNNI 185
Query: 187 WVWMSQKTPPNPDKLPWFENFARPGFQDVS--TIHELPYDHSILLENLMDPAHIPISHDR 244
++W ++P GF + T HE+ + EN D AH+ H
Sbjct: 186 YLWYHCDGAEPEWEIPEITEIT-DGFWHLGGRTEHEVMCHIQEIPENGADIAHLNYLHKS 244
Query: 245 TDWTAKRED 253
K D
Sbjct: 245 APPVTKGSD 253
>TIGR_CMR|BA_2145 [details] [associations]
symbol:BA_2145 "nitrite reductase [NAD(P)H], small subunit"
species:198094 "Bacillus anthracis str. Ames" [GO:0042128 "nitrate
assimilation" evidence=ISS] [GO:0042279 "nitrite reductase
(cytochrome, ammonia-forming) activity" evidence=ISS]
InterPro:IPR012748 InterPro:IPR017941 PROSITE:PS51296 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0042128
HOGENOM:HOG000128541 GO:GO:0008942 KO:K00363 TIGRFAMs:TIGR02378
RefSeq:NP_844543.1 RefSeq:YP_018788.1 RefSeq:YP_028259.1
ProteinModelPortal:Q81RA5 DNASU:1087756
EnsemblBacteria:EBBACT00000011373 EnsemblBacteria:EBBACT00000016919
EnsemblBacteria:EBBACT00000023808 GeneID:1087756 GeneID:2819878
GeneID:2847874 KEGG:ban:BA_2145 KEGG:bar:GBAA_2145 KEGG:bat:BAS1996
OMA:PMHDWKI ProtClustDB:CLSK916517
BioCyc:BANT260799:GJAJ-2064-MONOMER
BioCyc:BANT261594:GJ7F-2142-MONOMER Uniprot:Q81RA5
Length = 118
Score = 126 (49.4 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 29/112 (25%), Positives = 56/112 (50%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG 139
T++ + +D+P + + I L++ NG++R ++RCPH+ L+EG ++ G
Sbjct: 4 TKDKIKVMRAEDLPIQIGKEVQMKGMSIALFRLSNGDIRAVENRCPHKNGPLAEG-IVSG 62
Query: 140 RLE-CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWM 190
C H W KI L + + P C++TYEV+ G +++++
Sbjct: 63 EFVFCPLHDW---------KISLLTGEVQKPDDGCIQTYEVEVINGDIYIYI 105
>TIGR_CMR|SPO_3681 [details] [associations]
symbol:SPO_3681 "Rieske 2Fe-2S domain protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR001663
InterPro:IPR015879 InterPro:IPR017941 Pfam:PF00355 Pfam:PF00848
PRINTS:PR00090 PROSITE:PS51296 GO:GO:0005506 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0019439 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0016708 OMA:NVCLHRM
RefSeq:YP_168876.1 ProteinModelPortal:Q5LM82 GeneID:3194623
KEGG:sil:SPO3681 PATRIC:23380849 HOGENOM:HOG000145130
ProtClustDB:CLSK767406 Uniprot:Q5LM82
Length = 380
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 46/182 (25%), Positives = 79/182 (43%)
Query: 76 DYDWTEEWYPLYLTK--DVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSE 133
+Y + ++WY + P D + + Q IV+ +D +G+LR + C HR++ L
Sbjct: 42 EYIFRKDWYCVGRADALSAPGDY-VACELAGQPIVVLRDRDGDLRAMSNVCLHRMSTLLH 100
Query: 134 GQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTY---EVKESQGVVWVWM 190
G+ + C YH W + +GK + PA K C Y +V+ + + WV++
Sbjct: 101 GRGNAKTIVCPYHAWTYNLDGK---LRGAPAMTK-NEGFCKDQYALPQVRCEEWLGWVFV 156
Query: 191 SQKTPPNPDKLPWFENFARPGFQDVSTIHELPYD-H------SILLENLMDPAHIPISHD 243
P E A+ D++ E Y+ H +L EN M+ H+P+ H
Sbjct: 157 CLDPEATPVAAQLAEVAAKIEGYDMANYSEAFYEEHVWDTNWKVLAENFMESYHLPVCHA 216
Query: 244 RT 245
T
Sbjct: 217 GT 218
>TIGR_CMR|GSU_0845 [details] [associations]
symbol:GSU_0845 "Rieske 2Fe-2S family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR017941 Pfam:PF00355
PROSITE:PS51296 GO:GO:0046872 GO:GO:0016491 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 HOGENOM:HOG000128541 ProtClustDB:CLSK828052
RefSeq:NP_951902.1 ProteinModelPortal:Q74EW4 GeneID:2687147
KEGG:gsu:GSU0845 PATRIC:22024449 OMA:ACENYCP
BioCyc:GSUL243231:GH27-846-MONOMER Uniprot:Q74EW4
Length = 103
Score = 99 (39.9 bits), Expect = 0.00026, P = 0.00026
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 100 LTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFE-GEGKCVK 158
+TV +++VL D G + ++ CPH+ + + G + DG + C HGW ++ G C
Sbjct: 18 VTVNGEEVVLIND-KGTITACENYCPHQGSPMLAGVVKDGAISCPRHGWHYDLANGACTD 76
Query: 159 IP 160
P
Sbjct: 77 HP 78
>TIGR_CMR|CPS_4029 [details] [associations]
symbol:CPS_4029 "iron-sulfur cluster-binding protein,
Rieske family" species:167879 "Colwellia psychrerythraea 34H"
[GO:0009055 "electron carrier activity" evidence=ISS]
InterPro:IPR001663 InterPro:IPR015879 InterPro:IPR017941
Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090 PROSITE:PS51296
GO:GO:0005506 GO:GO:0019439 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 eggNOG:COG4638
GO:GO:0016708 RefSeq:YP_270687.1 ProteinModelPortal:Q47WY4
STRING:Q47WY4 DNASU:3519867 GeneID:3519867 KEGG:cps:CPS_4029
PATRIC:21470937 HOGENOM:HOG000217650 KO:K00479 OMA:DTEDPRA
ProtClustDB:CLSK2484156 BioCyc:CPSY167879:GI48-4042-MONOMER
Uniprot:Q47WY4
Length = 427
Score = 121 (47.7 bits), Expect = 0.00029, P = 0.00029
Identities = 32/123 (26%), Positives = 61/123 (49%)
Query: 81 EEWYPLYLTKDVPDDAP-LGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKL---SEGQL 136
+EW + +T ++PD+ + L + D I + +D NGE+R + + C HR +K+ +G++
Sbjct: 56 KEWLFVGITGEIPDNGNFITLDIGDNPITVIRDQNGEVRAFHNTCRHRGSKICLVKQGKV 115
Query: 137 IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP 196
+L C YH W +E +G + D + + + G ++V +S+ P
Sbjct: 116 --PKLVCPYHQWTYELDGNLLFAGTEMGDDFDKNDYGLHKVNCRVAGGYIFVSLSEN-PT 172
Query: 197 NPD 199
N D
Sbjct: 173 NID 175
>TIGR_CMR|GSU_3238 [details] [associations]
symbol:GSU_3238 "Rieske 2Fe-2S family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR017941 Pfam:PF00355
PROSITE:PS51296 GO:GO:0046872 GO:GO:0016491 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0051537 Gene3D:2.102.10.10
SUPFAM:SSF50022 HOGENOM:HOG000128541 RefSeq:NP_954279.1
ProteinModelPortal:Q747M7 GeneID:2688289 KEGG:gsu:GSU3238
PATRIC:22029321 OMA:YACETEC ProtClustDB:CLSK828052
BioCyc:GSUL243231:GH27-3216-MONOMER Uniprot:Q747M7
Length = 99
Score = 97 (39.2 bits), Expect = 0.00042, P = 0.00042
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 91 DVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR-LECLYHGWQ 149
++PD +TV Q+I+L K G++ + CPH+ A LS + D L C HG++
Sbjct: 9 EIPDFGKKVVTVNGQEILLVK-AKGQVYACETECPHQGAPLSGALVKDAEHLSCQRHGYR 67
Query: 150 FEGE-GKCVKIPQ 161
F + G C + P+
Sbjct: 68 FNLKTGACKEFPE 80
>ASPGD|ASPL0000005442 [details] [associations]
symbol:AN10836 species:162425 "Emericella nidulans"
[GO:0019439 "aromatic compound catabolic process" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0051537
"2 iron, 2 sulfur cluster binding" evidence=IEA] [GO:0016708
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, NAD(P)H as one
donor, and incorporation of two atoms of oxygen into one donor"
evidence=IEA] [GO:0005506 "iron ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001663
InterPro:IPR015879 InterPro:IPR017941 Pfam:PF00355 Pfam:PF00848
PRINTS:PR00090 PROSITE:PS51296 GO:GO:0005506 GO:GO:0019439
EMBL:BN001301 GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022
GO:GO:0016708 EnsemblFungi:CADANIAT00007400 OMA:IEHISAY
Uniprot:C8V157
Length = 445
Score = 119 (46.9 bits), Expect = 0.00051, P = 0.00051
Identities = 36/127 (28%), Positives = 54/127 (42%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLY--KDGNGELRCYQDRCPHRLAKLSEGQL 136
+++EW PL LT P T I L+ K + +R + + C HR + +
Sbjct: 76 FSKEWLPLTLTPLFPSPGVYHTTT-PAGIPLFAIKSKDSRIRVFHNVCRHRAYPVIYKER 134
Query: 137 IDGR---LECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQ 192
G+ L C YHGW ++ GK +K P+ RS + K GVVWV +S
Sbjct: 135 DSGKSLVLACRYHGWSYDSCGKLIKAPKFDGLEGFERSQNGLFGVRTKVINGVVWVNLSM 194
Query: 193 KTPPNPD 199
+ D
Sbjct: 195 EETDEDD 201
>UNIPROTKB|Q3C1D5 [details] [associations]
symbol:tphA2II "Terephthalate 1,2-dioxygenase, terminal
oxygenase component subunit alpha 2" species:34028 "Comamonas sp."
[GO:0005506 "iron ion binding" evidence=IDA] [GO:0018628
"terephthalate 1,2-dioxygenase activity" evidence=IDA] [GO:0018963
"phthalate metabolic process" evidence=IDA] InterPro:IPR001663
InterPro:IPR015879 InterPro:IPR015881 InterPro:IPR017941
Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090 PROSITE:PS00570
PROSITE:PS51296 GO:GO:0005506 GO:GO:0019439 GO:GO:0016702
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0018963
GO:GO:0018628 EMBL:AB238679 Uniprot:Q3C1D5
Length = 413
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 43/179 (24%), Positives = 74/179 (41%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQ-IVLYKDGNGELRCYQDRCPHR--LAKLSEGQLI 137
E W L L ++P T + IV+ +D + E+ +++RC HR L L +
Sbjct: 38 EVWNYLCLESEIPGAGDFRTTFAGETPIVVVRDADQEIYAFENRCAHRGALIALEKSGRT 97
Query: 138 DGRLECLYHGWQFEGEGKCVKIP---QLPADAKIPRSACVRTYEVKESQ-----GVVWVW 189
D +C+YH W + +G + + +P S C + ++ + G+V+
Sbjct: 98 DS-FQCVYHAWSYNRQGDLTGVAFEKGVKGQGGMPASFCKEEHGPRKLRVAVFCGLVFGS 156
Query: 190 MSQKTPPNPDKL-PWF-ENFARPGFQDVSTI----HELPYDHSILLENLMDPAHIPISH 242
S+ P D L P E R + V I +LP + + EN+ D H + H
Sbjct: 157 FSEDVPSIEDYLGPEICERIERVLHKPVEVIGRFTQKLPNNWKLYFENVKDSYHASLLH 215
>UNIPROTKB|Q3C1E3 [details] [associations]
symbol:tphA2I "Terephthalate 1,2-dioxygenase, terminal
oxygenase component subunit alpha 1" species:34028 "Comamonas sp."
[GO:0005506 "iron ion binding" evidence=IDA] [GO:0018628
"terephthalate 1,2-dioxygenase activity" evidence=IDA] [GO:0018963
"phthalate metabolic process" evidence=IDA] InterPro:IPR001663
InterPro:IPR015879 InterPro:IPR015881 InterPro:IPR017941
Pfam:PF00355 Pfam:PF00848 PRINTS:PR00090 PROSITE:PS00570
PROSITE:PS51296 GO:GO:0005506 GO:GO:0019439 GO:GO:0016702
GO:GO:0051537 Gene3D:2.102.10.10 SUPFAM:SSF50022 GO:GO:0018963
EMBL:AB238678 ProteinModelPortal:Q3C1E3 GO:GO:0018628
Uniprot:Q3C1E3
Length = 413
Score = 118 (46.6 bits), Expect = 0.00059, P = 0.00059
Identities = 43/179 (24%), Positives = 74/179 (41%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQ-IVLYKDGNGELRCYQDRCPHR--LAKLSEGQLI 137
E W L L ++P T + IV+ +D + E+ +++RC HR L L +
Sbjct: 38 EVWNYLCLESEIPGAGDFRTTFAGETPIVVVRDADQEIYAFENRCAHRGALIALEKSGRT 97
Query: 138 DGRLECLYHGWQFEGEGKCVKIP---QLPADAKIPRSACVRTYEVKESQ-----GVVWVW 189
D +C+YH W + +G + + +P S C + ++ + G+V+
Sbjct: 98 DS-FQCVYHAWSYNRQGDLTGVAFEKGVKGQGGMPASFCKEEHGPRKLRVAVFCGLVFGS 156
Query: 190 MSQKTPPNPDKL-PWF-ENFARPGFQDVSTI----HELPYDHSILLENLMDPAHIPISH 242
S+ P D L P E R + V I +LP + + EN+ D H + H
Sbjct: 157 FSEDVPSIEDYLGPEICERIERVLHKPVEVIGRFTQKLPNNWKLYFENVKDSYHASLLH 215
>TIGR_CMR|SPO_1590 [details] [associations]
symbol:SPO_1590 "Rieske 2Fe-2S domain protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR001663
InterPro:IPR015879 InterPro:IPR017941 Pfam:PF00355 Pfam:PF00848
PRINTS:PR00090 PROSITE:PS51296 GO:GO:0005506 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0019439 GO:GO:0051537
Gene3D:2.102.10.10 SUPFAM:SSF50022 HOGENOM:HOG000248945
GO:GO:0016708 RefSeq:YP_166831.1 ProteinModelPortal:Q5LT24
GeneID:3193705 KEGG:sil:SPO1590 PATRIC:23376503 KO:K00470
OMA:VENYSEC Uniprot:Q5LT24
Length = 363
Score = 116 (45.9 bits), Expect = 0.00078, P = 0.00078
Identities = 47/211 (22%), Positives = 81/211 (38%)
Query: 93 PDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEG 152
P D L + D+ + K +G +R + + C HR +L G + C YH W +E
Sbjct: 43 PGDY-LAFDLGDESLFCIKGRDGVIRTFYNVCQHRAHQLVSGAGSTRVVVCPYHAWTYEL 101
Query: 153 EGKCVKIPQLPADAKIPRSA-CVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFAR-- 209
G P + + C+ + G V+V + + P WF N
Sbjct: 102 TGHLRAAPNAKSVPGFDAAQICLSEIRTEVFLGFVFVNLDPEAQPMDH---WFPNVRAEL 158
Query: 210 ----PGFQDVSTIH--ELPYDHS--ILLENLMDPAHIPISHDRTDWTAKRE---DAQPLG 258
P + D+ + E+P D + + +EN + H ++H R D QP G
Sbjct: 159 EAFVPNWSDLKPLEWVEIPEDCNWKVSVENYSECYHCSLNHPTFSTGVIRPETYDIQPQG 218
Query: 259 FEVTERTDRGFAGRWGKEKDEPLPNFLRFEA 289
+ + T+ G+ + D PN R+ +
Sbjct: 219 YCLRHTTECNDLGQMSYDIDSGFPNNDRYSS 249
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 534 495 0.00083 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 633 (67 KB)
Total size of DFA: 351 KB (2174 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.27u 0.14s 39.41t Elapsed: 00:00:02
Total cpu time: 39.28u 0.14s 39.42t Elapsed: 00:00:02
Start: Fri May 10 07:51:36 2013 End: Fri May 10 07:51:38 2013