BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039074
(534 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255548670|ref|XP_002515391.1| chlorophyll a oxygenase, putative [Ricinus communis]
gi|223545335|gb|EEF46840.1| chlorophyll a oxygenase, putative [Ricinus communis]
Length = 552
Score = 896 bits (2315), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/537 (79%), Positives = 464/537 (86%), Gaps = 9/537 (1%)
Query: 6 RSLFFSPLLKIPSPKLTPPTTNVIISLNKTPKSR--KCHAVTD------RSSTSTVGDHK 57
+S SPL P T+++ + T K R KC+A + RS DH
Sbjct: 17 KSFPLSPLSSTSKPTTPTIKTHLLKPILHTLKIRHTKCYAASSTVHDESRSGVVEADDHM 76
Query: 58 VLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL 117
VLVGP+S EERRGER VADYDWTEEWYPLYLTKDVPDDAPLGLTVFD+QIVLYKDG GEL
Sbjct: 77 VLVGPSSEEERRGERVVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDKQIVLYKDGEGEL 136
Query: 118 RCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTY 177
RCY+DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLP +AKIP+SACV+TY
Sbjct: 137 RCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPTNAKIPQSACVKTY 196
Query: 178 EVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 237
E++ESQGVVWVWMS+KTPPN +KLPWFENFARPGFQD ST HELPYDHSILLENLMDPAH
Sbjct: 197 EIRESQGVVWVWMSRKTPPNLNKLPWFENFARPGFQDTSTTHELPYDHSILLENLMDPAH 256
Query: 238 IPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNR 297
IPISHDRTDW+AKREDAQ L F+VTERTDRGFAG WG++KD L NFLRFEAPCVLQNNR
Sbjct: 257 IPISHDRTDWSAKREDAQALRFKVTERTDRGFAGWWGRDKDPALLNFLRFEAPCVLQNNR 316
Query: 298 ELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQ 357
++VD + G KHYFTGLFLCRPTGQGK+MLIVRFG TKRS +AK P+WYFHQNASKVFEQ
Sbjct: 317 DIVD-ENGVKHYFTGLFLCRPTGQGKAMLIVRFGGTKRSHIAKWIPQWYFHQNASKVFEQ 375
Query: 358 DMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPK 417
DMGFLSSQNEVLMKE VPTK LYLNL+SSDTWVAEYRKWMDKVGHGMPYHFGHSTISLP+
Sbjct: 376 DMGFLSSQNEVLMKEKVPTKNLYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPE 435
Query: 418 VPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKN 477
VPAVVEHAPAGLVAGVSASSPAKG IGTMHAPNL+NRYFRHVIHC+ CSSV+K F WKN
Sbjct: 436 VPAVVEHAPAGLVAGVSASSPAKGGIGTMHAPNLSNRYFRHVIHCRKCSSVVKGFEAWKN 495
Query: 478 SLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRRL 534
+LS +A T LAILASGRQWK F L SA LCLAGVYAC+TAIAMNTTNFIRTHRRL
Sbjct: 496 ALSAIALVSTALAILASGRQWKPFLLLSAGLCLAGVYACTTAIAMNTTNFIRTHRRL 552
>gi|75219721|sp|O49931.1|TIC55_PEA RecName: Full=Protein TIC 55, chloroplastic; AltName: Full=Rieske
iron-sulfur protein TIC55; AltName: Full=Translocon at
the inner envelope membrane of chloroplasts 55;
Short=PsTIC55; Flags: Precursor
gi|2764524|emb|CAA04157.1| Rieske iron-sulfur protein Tic55 [Pisum sativum]
Length = 553
Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/522 (80%), Positives = 458/522 (87%), Gaps = 12/522 (2%)
Query: 22 TPPTTNVIISLNKTPKSRK-----CHAVTDRSSTSTV----GDHKVLVGPASAEERRGER 72
T P++N S NK SR+ C A +T+ D KVLVGP+S +ER+GER
Sbjct: 35 TNPSSN--FSFNKALSSRRRKQAWCVAAAADVKDATLLDGEEDQKVLVGPSSEQERKGER 92
Query: 73 QVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLS 132
+VADYDWTEEWYPLYLTK+VP DAPLGL V+D+ IVL++DGN + +CY+DRCPHRLAKLS
Sbjct: 93 EVADYDWTEEWYPLYLTKNVPHDAPLGLKVYDKNIVLFRDGNDQFQCYEDRCPHRLAKLS 152
Query: 133 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ 192
EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP+SACV+TYEV++SQGV+WVWMS+
Sbjct: 153 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPKSACVKTYEVRDSQGVLWVWMSR 212
Query: 193 KTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKRE 252
KTPPN K+PWFENFARPGFQD+ST HELPYDHSILLENLMDPAH+PISHDRTDW+AKRE
Sbjct: 213 KTPPNVSKIPWFENFARPGFQDISTTHELPYDHSILLENLMDPAHVPISHDRTDWSAKRE 272
Query: 253 DAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTG 312
DAQ LGFEVTERTDRGFAG WG+EKD PNFLRFEAPCVLQNNRE+VD K GE ++F+G
Sbjct: 273 DAQALGFEVTERTDRGFAGWWGREKDGSKPNFLRFEAPCVLQNNREIVD-KNGEINHFSG 331
Query: 313 LFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKE 372
LFLCRPTGQGKSMLIVRFGATKRSPL KLFP+WYFHQNASKVFEQDMGFLSSQNE+L+KE
Sbjct: 332 LFLCRPTGQGKSMLIVRFGATKRSPLIKLFPEWYFHQNASKVFEQDMGFLSSQNEILLKE 391
Query: 373 TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAG 432
VPTKELYLNL+SSDTWVAEYRKWMDKVGHGMPYHFGHSTISLP+ PAVVEHAPAGLVAG
Sbjct: 392 KVPTKELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPEEPAVVEHAPAGLVAG 451
Query: 433 VSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAIL 492
+SASSPAKG IGTMHAPNLANRYFRHVIHCKGCSS IKAF WKN LS V AL LAIL
Sbjct: 452 LSASSPAKGGIGTMHAPNLANRYFRHVIHCKGCSSAIKAFQIWKNVLSGVVVALAALAIL 511
Query: 493 ASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRRL 534
SGRQWK LASASLC GVYACSTAIAMNTTNFIR HRRL
Sbjct: 512 VSGRQWKVLLLASASLCSVGVYACSTAIAMNTTNFIRVHRRL 553
>gi|224143358|ref|XP_002324928.1| predicted protein [Populus trichocarpa]
gi|222866362|gb|EEF03493.1| predicted protein [Populus trichocarpa]
Length = 549
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/532 (78%), Positives = 462/532 (86%), Gaps = 10/532 (1%)
Query: 10 FSPLLKIPSPKLTPPTTNVIISLNKTPKS-RKCHAVTDR------SSTSTVGDHKVLVGP 62
F+P K+P+ ++++ S++ P +KCHAV D S + H VL+GP
Sbjct: 21 FTPTTKLPT--TIHINSHLLKSIHSKPYYIKKCHAVADAPTAIPPSLDAEDDAHGVLIGP 78
Query: 63 ASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQD 122
+S EERRG+ V DY+WTEEWYPLYLTKDVPDDAPLGL VFD+Q+VLYKDG GELRC++D
Sbjct: 79 SSEEERRGDGAVVDYNWTEEWYPLYLTKDVPDDAPLGLNVFDKQLVLYKDGQGELRCHED 138
Query: 123 RCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKES 182
RCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPA+AKIP+SACV+TYEVKES
Sbjct: 139 RCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPANAKIPQSACVKTYEVKES 198
Query: 183 QGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
QGVVWVWMS KTPPN K+PWFENFARPGFQD STIHELPYDHSILLENLMDPAHIPISH
Sbjct: 199 QGVVWVWMSLKTPPNFKKVPWFENFARPGFQDTSTIHELPYDHSILLENLMDPAHIPISH 258
Query: 243 DRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDS 302
DRTDWT+KREDAQ L FEVTERT RGFAGRWGKEKD+ L +FLRF+APCVL N+ E D
Sbjct: 259 DRTDWTSKREDAQALRFEVTERTHRGFAGRWGKEKDQKLRSFLRFQAPCVLSNDIEFADE 318
Query: 303 KTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFL 362
K G YFTGLFLCRPTGQGKSM+IVRFGATKR +AK+ PKWYFHQNA K+FEQDMGFL
Sbjct: 319 K-GVTQYFTGLFLCRPTGQGKSMIIVRFGATKRPQMAKVIPKWYFHQNACKIFEQDMGFL 377
Query: 363 SSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVV 422
SSQNEVLMKE VPTKELY+NL+SSDTWVAEYRKWMDKVGHGMPY+FGH+TISLP+VPAVV
Sbjct: 378 SSQNEVLMKEKVPTKELYINLKSSDTWVAEYRKWMDKVGHGMPYYFGHNTISLPEVPAVV 437
Query: 423 EHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVV 482
EHAPAGLVAGVSASSPAKG IGTMHAPN+ NRYFRHVIHCKGC+SV+K F WKN+LS +
Sbjct: 438 EHAPAGLVAGVSASSPAKGGIGTMHAPNVNNRYFRHVIHCKGCTSVVKNFQAWKNALSAI 497
Query: 483 AAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRRL 534
+ ALT LAILASGRQWK F L SASLCLAGVYACSTAIAMNTTNFIRTHRRL
Sbjct: 498 SVALTALAILASGRQWKTFLLVSASLCLAGVYACSTAIAMNTTNFIRTHRRL 549
>gi|356507174|ref|XP_003522345.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 532
Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/498 (83%), Positives = 446/498 (89%), Gaps = 11/498 (2%)
Query: 37 KSRKCHAVTDRSSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDA 96
K +C A D + DH VLVGP S EER+G DYDWT+EWYPLYLT++VP+DA
Sbjct: 46 KQLRCGATADIKA-----DHAVLVGPTSEEERKG-----DYDWTQEWYPLYLTQNVPEDA 95
Query: 97 PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 156
PLGL VFD+Q+VL+KDGNG+ RCY+DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC
Sbjct: 96 PLGLRVFDKQLVLFKDGNGQFRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 155
Query: 157 VKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVS 216
VKIPQLPADAKIPR+ACV+TYEV++SQGV+WVWMS KTPPN KLPWFENFARPGFQDVS
Sbjct: 156 VKIPQLPADAKIPRAACVKTYEVRDSQGVIWVWMSLKTPPNVSKLPWFENFARPGFQDVS 215
Query: 217 TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKE 276
TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPL FEVTERTDRGFAG WG+E
Sbjct: 216 TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLCFEVTERTDRGFAGWWGRE 275
Query: 277 KDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRS 336
KD +PNFLRFEAPCVLQNNRE+VD K GE +YF+GLFLCRPTGQGKSMLIVRFG TKRS
Sbjct: 276 KDGSMPNFLRFEAPCVLQNNREIVD-KNGEINYFSGLFLCRPTGQGKSMLIVRFGGTKRS 334
Query: 337 PLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKW 396
PLAK+FPKWYFHQNASKVFEQDMGFLSSQNE+L++E VPTKELYLNL+SSDTWVAEYRKW
Sbjct: 335 PLAKVFPKWYFHQNASKVFEQDMGFLSSQNEILLREKVPTKELYLNLKSSDTWVAEYRKW 394
Query: 397 MDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYF 456
MDK GHGMPYHFGHSTISLPK PAVVEHAPAGLVAG SASSP KG IGTMHAPN ANRYF
Sbjct: 395 MDKAGHGMPYHFGHSTISLPKEPAVVEHAPAGLVAGQSASSPTKGGIGTMHAPNFANRYF 454
Query: 457 RHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYAC 516
RHVIHCKGC +V+KAF WKN+LS VA ALT LAIL SGRQWK LASA+LC GVYAC
Sbjct: 455 RHVIHCKGCRTVVKAFEAWKNALSAVAIALTALAILLSGRQWKVLLLASAALCSVGVYAC 514
Query: 517 STAIAMNTTNFIRTHRRL 534
STAIAMNTTNFIRTHRRL
Sbjct: 515 STAIAMNTTNFIRTHRRL 532
>gi|359475902|ref|XP_002283433.2| PREDICTED: protein TIC 55, chloroplastic-like [Vitis vinifera]
gi|296082166|emb|CBI21171.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 878 bits (2268), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/545 (76%), Positives = 462/545 (84%), Gaps = 12/545 (2%)
Query: 1 MALSLRSLFFSPLLKIPSPKLTPPTTNVIISLNKTP---------KSRKCHAVTDRSSTS 51
MAL L SP L PK TP + + K P S +C A+ +
Sbjct: 1 MALLQPFLSHSPPLSFSLPKPTPLSLVSLSQSLKPPHKLLTQTWRDSIRCCAIAEIRDGV 60
Query: 52 TVG--DHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL 109
++G D VLV P+S EE RGER VA+YDW EEWYPLYLTKD+P+DAP+GLTVFD+Q+VL
Sbjct: 61 SLGGEDQGVLVDPSSQEEVRGERHVAEYDWKEEWYPLYLTKDIPEDAPMGLTVFDKQLVL 120
Query: 110 YKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP 169
Y+DG L+CY+DRCPHRLAKLSEGQL+DGRLECLYHGWQFEGEGKCVKIPQLPADAKIP
Sbjct: 121 YRDGKDLLQCYEDRCPHRLAKLSEGQLVDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP 180
Query: 170 RSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 229
RSACV+TYEVK+SQGVVWVWMS +TPPNPDKLPWFENFARPGF+D STIHELPYDHSILL
Sbjct: 181 RSACVKTYEVKDSQGVVWVWMSHRTPPNPDKLPWFENFARPGFRDTSTIHELPYDHSILL 240
Query: 230 ENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEA 289
ENLMDPAH+PISHDRTDW+AKREDAQPL F+VTERTDRGFAG WG+EKDE L NFLRFEA
Sbjct: 241 ENLMDPAHVPISHDRTDWSAKREDAQPLCFKVTERTDRGFAGWWGREKDESLLNFLRFEA 300
Query: 290 PCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQ 349
PCVLQNNRE+VD K GEKHYFTGLFLCRP+GQGKSMLIVRFG+TKRSP+AKLFP+WYFHQ
Sbjct: 301 PCVLQNNREIVD-KNGEKHYFTGLFLCRPSGQGKSMLIVRFGSTKRSPIAKLFPEWYFHQ 359
Query: 350 NASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFG 409
NA KVFEQDMGFLSSQNE+LMKE VPTKELYLNLRSSDTWVAEYR+WMDKVGHGMPYHFG
Sbjct: 360 NAGKVFEQDMGFLSSQNEILMKEKVPTKELYLNLRSSDTWVAEYRRWMDKVGHGMPYHFG 419
Query: 410 HSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVI 469
HSTISLP+ PAVVEHAPAGLVAG+SASSPAKG IGTMHAPN ANRYFRHV+HCKGC SV+
Sbjct: 420 HSTISLPQQPAVVEHAPAGLVAGLSASSPAKGGIGTMHAPNPANRYFRHVVHCKGCRSVV 479
Query: 470 KAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIR 529
KAF WKN +A A T LAIL +GRQWKA L +L LAG+YACST +AMNTTNF+R
Sbjct: 480 KAFQAWKNVFFTLALASTALAILVTGRQWKALLLVGTALSLAGMYACSTVVAMNTTNFVR 539
Query: 530 THRRL 534
HRRL
Sbjct: 540 IHRRL 544
>gi|357465983|ref|XP_003603276.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula]
gi|355492324|gb|AES73527.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula]
Length = 552
Score = 868 bits (2242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/545 (77%), Positives = 471/545 (86%), Gaps = 14/545 (2%)
Query: 3 LSLRSLFFSPLLKIPSPKL---TPPTTNVIISLNK-TPKSRKCHA-----VTDRSSTSTV 53
L ++ F P+ PS ++ T P+++ +LNK SR+ HA D + ST+
Sbjct: 9 LPTKTHFALPVSPPPSKQILLWTSPSSSFSFNLNKGLSSSRRKHAGYLPATADVKTASTL 68
Query: 54 ----GDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL 109
D KVLVGP+S +ERRGER++A YDW EEWYPLYLTK+VPDDAPLGLTVFD+ +VL
Sbjct: 69 LDVEEDQKVLVGPSSEQERRGERELAAYDWKEEWYPLYLTKNVPDDAPLGLTVFDKNLVL 128
Query: 110 YKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP 169
+KDGN + +CY+DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP
Sbjct: 129 FKDGNDQFQCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP 188
Query: 170 RSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 229
RSACV+TYEV++SQGV+WVWMS K PPN K+PWFENFARPGFQDVST HELPYDHSILL
Sbjct: 189 RSACVKTYEVRDSQGVIWVWMSPKVPPNVSKIPWFENFARPGFQDVSTTHELPYDHSILL 248
Query: 230 ENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEA 289
ENLMDPAHIPISHDRTDWTAKREDAQPL FEVTERTDRGFAG WG+EKD PNFLRFEA
Sbjct: 249 ENLMDPAHIPISHDRTDWTAKREDAQPLLFEVTERTDRGFAGWWGREKDGTKPNFLRFEA 308
Query: 290 PCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQ 349
PCVLQNNRE+VD K GE +YF+GLFLCRPTGQGKSMLIVRFG TKRSP+ KLFP+WYFHQ
Sbjct: 309 PCVLQNNREIVD-KNGEINYFSGLFLCRPTGQGKSMLIVRFGGTKRSPIVKLFPQWYFHQ 367
Query: 350 NASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFG 409
NASKVFEQDMGFLSSQNE+L+KE VPTKELYLNL+SSDTWVAEYRKWMDKVGHGMPYHFG
Sbjct: 368 NASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFG 427
Query: 410 HSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVI 469
H+TISLPK PAV+EHAPAGL+AG+SASSPAKG IGTMHAPNLANRYFRHVIHCKGC + +
Sbjct: 428 HNTISLPKEPAVIEHAPAGLIAGLSASSPAKGGIGTMHAPNLANRYFRHVIHCKGCRTAV 487
Query: 470 KAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIR 529
KAF TWKN+LS V AL LAIL +GRQWKA LASA+LC GVYACSTA+A+NTTNFIR
Sbjct: 488 KAFQTWKNALSAVVVALAALAILVTGRQWKAILLASAALCSVGVYACSTAVALNTTNFIR 547
Query: 530 THRRL 534
THRRL
Sbjct: 548 THRRL 552
>gi|224092649|ref|XP_002309693.1| predicted protein [Populus trichocarpa]
gi|222855669|gb|EEE93216.1| predicted protein [Populus trichocarpa]
Length = 556
Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/542 (76%), Positives = 451/542 (83%), Gaps = 17/542 (3%)
Query: 6 RSLFFSPLLKIPSPKLTPPTTNVIISLNKTPKSRKCHAVTDRSSTSTV------------ 53
+ L F PL P P+ T+ I + S KCHAVTD +S +TV
Sbjct: 19 KPLAFYPLSLTPKPR---KTSRPIHVKQQQQGSIKCHAVTDLTSGNTVPSSIEDQSKGED 75
Query: 54 -GDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD 112
DH VLVGP+S EERRGER+VADYDWTEEWYPLYLTKDVPDDAPLGLTVFD+Q+VLYKD
Sbjct: 76 NDDHLVLVGPSSEEERRGEREVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDKQVVLYKD 135
Query: 113 GNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA 172
G GELRC++DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG CVKIPQLPA+AKIP+SA
Sbjct: 136 GQGELRCFEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGNCVKIPQLPANAKIPQSA 195
Query: 173 CVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENL 232
CV+TYEV+ESQGVVWVWMS K+ PN +KLPWFENFARPGF+D S +HELPYDHSILLENL
Sbjct: 196 CVKTYEVRESQGVVWVWMSSKSQPNINKLPWFENFARPGFKDSSAVHELPYDHSILLENL 255
Query: 233 MDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCV 292
MDPAHIPISHDRTD +AKRE+AQPL FEVTERTDRGFAG WG + LPNFLRFEAPCV
Sbjct: 256 MDPAHIPISHDRTDLSAKRENAQPLRFEVTERTDRGFAGWWGGGDAQTLPNFLRFEAPCV 315
Query: 293 LQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNAS 352
L NNRE +D K G K YF+GLFLCRPTGQGKSMLIVRFG T +A P+W+FHQ
Sbjct: 316 LSNNREFIDEK-GVKQYFSGLFLCRPTGQGKSMLIVRFGGTAMPQIANWIPEWFFHQRGC 374
Query: 353 KVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHST 412
VFEQDMGFLSSQNEVLMKE VPTK+LYLNLRSSDTWVAEYRKWMDK GHGMPYHFGH+T
Sbjct: 375 TVFEQDMGFLSSQNEVLMKEKVPTKKLYLNLRSSDTWVAEYRKWMDKTGHGMPYHFGHNT 434
Query: 413 ISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAF 472
ISLP++PAVVEHAPAGLVAGVSAS PAKG GTMHAPNLANRYFRHVIHCKGCS +KAF
Sbjct: 435 ISLPELPAVVEHAPAGLVAGVSASFPAKGGTGTMHAPNLANRYFRHVIHCKGCSGALKAF 494
Query: 473 STWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHR 532
+TWK +LS ++ ALT LAIL SGRQWKA L S SLCLAGVYACST I M+TTNFIRTHR
Sbjct: 495 NTWKKALSAISLALTALAILVSGRQWKAALLVSTSLCLAGVYACSTLIQMSTTNFIRTHR 554
Query: 533 RL 534
R
Sbjct: 555 RF 556
>gi|356514868|ref|XP_003526124.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 540
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 405/481 (84%), Positives = 435/481 (90%), Gaps = 6/481 (1%)
Query: 54 GDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG 113
DH VLVGPAS +ER+G DYDWT+EWYPLYLT +VP+DAPLGL VFD+Q+VL+KDG
Sbjct: 66 ADHAVLVGPASEDERKG-----DYDWTQEWYPLYLTLNVPEDAPLGLRVFDKQLVLFKDG 120
Query: 114 NGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC 173
NG+ RCY+DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP++AC
Sbjct: 121 NGQFRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPQAAC 180
Query: 174 VRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLM 233
V+TYEV++SQGV+WVWMS KTPPN KLPWFENFARP FQD+STIHELPYDHSILLENLM
Sbjct: 181 VKTYEVRDSQGVIWVWMSLKTPPNVSKLPWFENFARPEFQDISTIHELPYDHSILLENLM 240
Query: 234 DPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVL 293
DPAHIPISHDRTDWTAKREDAQPL FEVTERT RGFAG WG+EKD +PNFLRFEAPCVL
Sbjct: 241 DPAHIPISHDRTDWTAKREDAQPLCFEVTERTHRGFAGWWGREKDGSMPNFLRFEAPCVL 300
Query: 294 QNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASK 353
QNNRE+VD K GE +YF+GLFLCRPTGQGKSMLIVRFG TKRSPLAK+FPKWY HQNASK
Sbjct: 301 QNNREIVD-KNGEINYFSGLFLCRPTGQGKSMLIVRFGGTKRSPLAKVFPKWYLHQNASK 359
Query: 354 VFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTI 413
VFEQDMGFLSSQNE+L+KE V TKELYLNL+SSDTWVAEYRKWMDK GHGMPYHFGHSTI
Sbjct: 360 VFEQDMGFLSSQNEILLKEKVSTKELYLNLKSSDTWVAEYRKWMDKAGHGMPYHFGHSTI 419
Query: 414 SLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFS 473
SLPK PAVVEHAPAGLVAG SASSP KG IGTMHAPN ANRYFRHVIHCKGC +V+KAF
Sbjct: 420 SLPKEPAVVEHAPAGLVAGQSASSPTKGGIGTMHAPNFANRYFRHVIHCKGCRTVVKAFE 479
Query: 474 TWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRR 533
WKN+LS VA AL LAIL SGRQWKA LASA+LC GVYACS AIAMNTTNFIRTHRR
Sbjct: 480 AWKNALSAVAVALVALAILVSGRQWKALLLASAALCSVGVYACSIAIAMNTTNFIRTHRR 539
Query: 534 L 534
L
Sbjct: 540 L 540
>gi|15224625|ref|NP_180055.1| translocon at the inner envelope membrane of chloroplasts 55-II
[Arabidopsis thaliana]
gi|75265982|sp|Q9SK50.1|TIC55_ARATH RecName: Full=Protein TIC 55, chloroplastic; AltName:
Full=Translocon at the inner envelope membrane of
chloroplasts 55; Short=AtTIC55; AltName: Full=Translocon
at the inner envelope membrane of chloroplasts 55-II;
Flags: Precursor
gi|4559369|gb|AAD23030.1| putative Rieske iron-sulfur protein [Arabidopsis thaliana]
gi|330252538|gb|AEC07632.1| translocon at the inner envelope membrane of chloroplasts 55-II
[Arabidopsis thaliana]
Length = 539
Score = 799 bits (2063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/487 (79%), Positives = 422/487 (86%), Gaps = 6/487 (1%)
Query: 49 STSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIV 108
S T G VL+ P EE+R E VADYDWTEEWYPLYLTK+VP+DAPLGLTV+D+QIV
Sbjct: 58 SDQTEGGGDVLLNPE--EEKRVE--VADYDWTEEWYPLYLTKNVPEDAPLGLTVYDRQIV 113
Query: 109 LYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKI 168
LYKDG G LRCY+DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPA AKI
Sbjct: 114 LYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPASAKI 173
Query: 169 PRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSIL 228
P++ACV+TYEVK+SQGVVWVWMS KTPPNP+KLPWFENFARPGF D+ST HELPYDHSIL
Sbjct: 174 PKAACVKTYEVKDSQGVVWVWMSTKTPPNPEKLPWFENFARPGFFDISTTHELPYDHSIL 233
Query: 229 LENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPL-PNFLRF 287
LENLMDPAH+PISHDRTD+TAKREDAQPL FEVTER++RGFAG WG+EK+ N LRF
Sbjct: 234 LENLMDPAHVPISHDRTDFTAKREDAQPLVFEVTERSNRGFAGTWGREKEGGKGSNLLRF 293
Query: 288 EAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYF 347
+APCVLQNNRE + K G K+YF+GLFLCRPTGQGKSMLIVRFG TKRSPL + P+W++
Sbjct: 294 DAPCVLQNNREF-EGKDGVKNYFSGLFLCRPTGQGKSMLIVRFGVTKRSPLVSVLPQWFW 352
Query: 348 HQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYH 407
HQNA KVFEQDMGFLSSQNEVLMKE VPTK+LYLNL+SSDTWVAEYRKWMDKVGHGMPYH
Sbjct: 353 HQNACKVFEQDMGFLSSQNEVLMKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHGMPYH 412
Query: 408 FGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSS 467
FGH TISLPKVP VVEHAPAGL+A +SAS PAKG IGTMHAPNLANRYFRH+IHC+ CS+
Sbjct: 413 FGHRTISLPKVPPVVEHAPAGLIAALSASYPAKGGIGTMHAPNLANRYFRHIIHCRSCSN 472
Query: 468 VIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNF 527
VIK+F WKN LS A ALT LAIL RQWKA L SA+LC A Y C AI +NT NF
Sbjct: 473 VIKSFELWKNILSATAVALTALAILVVSRQWKAVLLGSAALCSAAAYTCLRAINLNTNNF 532
Query: 528 IRTHRRL 534
IRTHRRL
Sbjct: 533 IRTHRRL 539
>gi|449455677|ref|XP_004145578.1| PREDICTED: protein TIC 55, chloroplastic-like [Cucumis sativus]
gi|449485314|ref|XP_004157131.1| PREDICTED: protein TIC 55, chloroplastic-like [Cucumis sativus]
Length = 542
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/502 (74%), Positives = 423/502 (84%), Gaps = 3/502 (0%)
Query: 34 KTPKSRKCHAVTDRSSTSTVGDHKV-LVGPASAEERRGERQVADYDWTEEWYPLYLTKDV 92
KT + + AV V D++V L+GP ++E+ E A+Y+WTEEWYPLYLTKDV
Sbjct: 43 KTRFAVRTAAVAGAQIADPVDDNQVVLLGPTTSEKPDDE-ATAEYNWTEEWYPLYLTKDV 101
Query: 93 PDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEG 152
P+DAPLGLTVFD+Q+VLY+DG GEL C++DRCPHRLAKLSEGQLIDGRLECLYHGWQFEG
Sbjct: 102 PEDAPLGLTVFDKQLVLYRDGAGELHCHEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEG 161
Query: 153 EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGF 212
EGKCVKIPQLP+DAKIPRSAC+RTYEV++SQGVVWVWMS + P +PWFENF RPGF
Sbjct: 162 EGKCVKIPQLPSDAKIPRSACLRTYEVRDSQGVVWVWMSLEKPSTLKSIPWFENFDRPGF 221
Query: 213 QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGR 272
+D S+IHELPYDHSILLENLMDPAHIPISHDRT + AKREDAQPL FEVTERT+RGFAGR
Sbjct: 222 RDFSSIHELPYDHSILLENLMDPAHIPISHDRTSYPAKREDAQPLDFEVTERTNRGFAGR 281
Query: 273 WGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGA 332
WG KD+PL NFLRFEAPCVLQNNRE +K G YFTGLFLCRPTGQGKSM+IVRFG+
Sbjct: 282 WGNAKDQPLSNFLRFEAPCVLQNNRE-TPNKKGGIDYFTGLFLCRPTGQGKSMVIVRFGS 340
Query: 333 TKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAE 392
T + LFP W+ HQNA +VFEQDMGFLSSQNEVLMKE VPTKELYLNLRSSDTWV E
Sbjct: 341 TASTVRLNLFPAWFLHQNACRVFEQDMGFLSSQNEVLMKEKVPTKELYLNLRSSDTWVLE 400
Query: 393 YRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLA 452
YR+WMDKVGHGMPY+FGHSTISLPK+PAV+EHAPAG+VAG +AS PAKG IGTMHAPNL+
Sbjct: 401 YRRWMDKVGHGMPYYFGHSTISLPKLPAVIEHAPAGIVAGTAASPPAKGGIGTMHAPNLS 460
Query: 453 NRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAG 512
NRYFRH+IHC+ CS+VIK+F TW +LS +A L LAIL +GRQWKA L SA+L G
Sbjct: 461 NRYFRHIIHCRSCSNVIKSFQTWNKALSAIAITLIALAILVNGRQWKALSLLSAALFFGG 520
Query: 513 VYACSTAIAMNTTNFIRTHRRL 534
YACS A+A+NT NFIRTHRRL
Sbjct: 521 AYACSAALALNTDNFIRTHRRL 542
>gi|297821841|ref|XP_002878803.1| hypothetical protein ARALYDRAFT_901077 [Arabidopsis lyrata subsp.
lyrata]
gi|297324642|gb|EFH55062.1| hypothetical protein ARALYDRAFT_901077 [Arabidopsis lyrata subsp.
lyrata]
Length = 539
Score = 793 bits (2048), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/536 (73%), Positives = 439/536 (81%), Gaps = 13/536 (2%)
Query: 7 SLFFSPLLKIPSPKLTPP-------TTNVIISLNKTPKSRKCHAVTDRSSTSTVGDHKVL 59
SL +P I KLTPP TT + + + R+ + G +VL
Sbjct: 9 SLQLTPTSPILFTKLTPPIIHNQRPTTCTVPTKPRLRLLRRSAVAGTAVADQIEGGGEVL 68
Query: 60 VGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRC 119
+ EE+R E VADYDWTEEWYPLYLTK++PDDAPLGLTV+D+QIVLYKDG G LRC
Sbjct: 69 LN--LEEEKRVE--VADYDWTEEWYPLYLTKNIPDDAPLGLTVYDRQIVLYKDGEGTLRC 124
Query: 120 YQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEV 179
Y+DRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPA AKIP++ACV+TYEV
Sbjct: 125 YEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPASAKIPKAACVKTYEV 184
Query: 180 KESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIP 239
K+SQGVVWVWMS KTPPNP+KLPWFENFARPGF D+ST HELPYDHSILLENLMDPAH+P
Sbjct: 185 KDSQGVVWVWMSTKTPPNPEKLPWFENFARPGFFDISTTHELPYDHSILLENLMDPAHVP 244
Query: 240 ISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPL-PNFLRFEAPCVLQNNRE 298
ISHDRTD+TAKREDAQPL FEVTER++RGFAG WG+EKD N LRF+APCVLQNNRE
Sbjct: 245 ISHDRTDFTAKREDAQPLVFEVTERSNRGFAGTWGREKDGGKGSNLLRFDAPCVLQNNRE 304
Query: 299 LVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQD 358
+ K G K+YF+GLFLCRPTGQGKSMLIVRFG TKRSPL + P+W++HQNA KVFEQD
Sbjct: 305 F-EGKDGVKNYFSGLFLCRPTGQGKSMLIVRFGVTKRSPLVSVLPQWFWHQNACKVFEQD 363
Query: 359 MGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKV 418
MGFLSSQNEVLMKE VPTK+LYLNL+SSDTWVAEYRKWMDKVGHGMPYHFGH TISLPKV
Sbjct: 364 MGFLSSQNEVLMKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHRTISLPKV 423
Query: 419 PAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNS 478
P VVEHAPAGL+A +SAS PAKG IGTMHAPNLANRYFRH+IHC+ CS+VIK+F WKN
Sbjct: 424 PPVVEHAPAGLIAALSASYPAKGGIGTMHAPNLANRYFRHIIHCRSCSNVIKSFELWKNI 483
Query: 479 LSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRRL 534
LS A ALT LAIL RQWKA L SA+LC A YAC AI +NT NFIRTHRRL
Sbjct: 484 LSATAVALTTLAILVVSRQWKAVLLGSAALCSAAAYACLRAINLNTNNFIRTHRRL 539
>gi|242063354|ref|XP_002452966.1| hypothetical protein SORBIDRAFT_04g035660 [Sorghum bicolor]
gi|241932797|gb|EES05942.1| hypothetical protein SORBIDRAFT_04g035660 [Sorghum bicolor]
Length = 538
Score = 689 bits (1778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 329/458 (71%), Positives = 384/458 (83%), Gaps = 1/458 (0%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
YDW EEWYPLYL+K+VPDDA L LTVFD+Q+VL++DGNG LRC++DRCPHRLAKLSEGQ+
Sbjct: 82 YDWKEEWYPLYLSKEVPDDAALPLTVFDRQLVLWRDGNGVLRCHEDRCPHRLAKLSEGQI 141
Query: 137 IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP 196
+DG+LECLYHGWQF+GEGKCVKIPQLP AKIPRSAC R YEV++SQGVVWVW+S PP
Sbjct: 142 VDGKLECLYHGWQFDGEGKCVKIPQLPEGAKIPRSACARNYEVRDSQGVVWVWVSDANPP 201
Query: 197 NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
+ KLPWFE +AR GF D+ST+HELPYDHSILLENLMDPAH+PISHDRTDWTAKREDAQP
Sbjct: 202 DEGKLPWFEPYARAGFTDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQP 261
Query: 257 LGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLC 316
L F+VTERT RGFAG WG+ L N LRFEAPCVL N E D K G + F+ FLC
Sbjct: 262 LFFDVTERTPRGFAGYWGRTSTPHLRNLLRFEAPCVLTNTLEYTD-KDGTEQCFSAHFLC 320
Query: 317 RPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT 376
RP GQGKSML+VRFG+T RSPLAK+ P WYFHQNA KVFEQDMGFLSSQNEVL++E VPT
Sbjct: 321 RPAGQGKSMLLVRFGSTLRSPLAKVLPTWYFHQNACKVFEQDMGFLSSQNEVLLREKVPT 380
Query: 377 KELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSAS 436
+ELYLNLRSSDTWVAEYRKWMD+ GHGMPY+FGH+T+S P VPAVVE APAG VAG+SAS
Sbjct: 381 RELYLNLRSSDTWVAEYRKWMDRAGHGMPYYFGHTTLSPPPVPAVVEQAPAGAVAGISAS 440
Query: 437 SPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGR 496
PAKG +GT+HAPN NRYFRHV+HCKGC + +K +++ KN+ + +AAA A+LA+ R
Sbjct: 441 FPAKGGVGTVHAPNPTNRYFRHVVHCKGCRATVKKYTSLKNAFAALAAAAVAAAVLAATR 500
Query: 497 QWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRRL 534
QWKA LA++++ A YAC +++ TTNFIRTHRRL
Sbjct: 501 QWKAVLLAASAVLAAASYACDALVSLLTTNFIRTHRRL 538
>gi|357137389|ref|XP_003570283.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like
[Brachypodium distachyon]
Length = 539
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/458 (72%), Positives = 381/458 (83%), Gaps = 1/458 (0%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
YDW EEWYPLYL+K+VPDDA L LTVFD+Q+VLY+D +G LRC++DRCPHRLAKLSEGQL
Sbjct: 83 YDWKEEWYPLYLSKEVPDDAALPLTVFDRQLVLYRDADGVLRCHEDRCPHRLAKLSEGQL 142
Query: 137 IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP 196
+DG+LECLYHGWQF+GEGKCVKIPQLP AKIPR+AC R YEV++SQGVVWVWMS PP
Sbjct: 143 VDGKLECLYHGWQFDGEGKCVKIPQLPDGAKIPRNACARNYEVRDSQGVVWVWMSPSNPP 202
Query: 197 NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
+ KLPWFE +AR GF D+ST+HELPYDHSILLENLMDPAH+PISHDRTDWTAKREDAQP
Sbjct: 203 DSSKLPWFEPYARAGFTDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQP 262
Query: 257 LGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLC 316
L FEVTERT RGFAG W +E+ L + LRFEAPCVL N E VD K G++ F+ FLC
Sbjct: 263 LAFEVTERTRRGFAGYWARERAPHLRSLLRFEAPCVLTNTLEFVD-KDGKEQCFSAQFLC 321
Query: 317 RPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT 376
RP GQGK+ML+VRFG+T SPL K+ P+WYFHQNA KVFEQDMGFLSSQNEVL++E VPT
Sbjct: 322 RPAGQGKAMLLVRFGSTASSPLMKVLPQWYFHQNACKVFEQDMGFLSSQNEVLLREKVPT 381
Query: 377 KELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSAS 436
KELYLNLRSSDTWVAEYR+WMDK GHGMPY+FGHST+S P VPAVVE APAG VAG+SAS
Sbjct: 382 KELYLNLRSSDTWVAEYRRWMDKAGHGMPYYFGHSTLSPPPVPAVVEQAPAGAVAGISAS 441
Query: 437 SPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGR 496
PAKG IGT HAPN NRYFRHV+HCKGC + ++ KN+ V+AA A+LA+ R
Sbjct: 442 FPAKGGIGTTHAPNPTNRYFRHVVHCKGCRETVNRYTALKNAFVVLAAVAAAAAVLAATR 501
Query: 497 QWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRRL 534
QWKA LASA++ A YAC + +++ TTNFIRTHRRL
Sbjct: 502 QWKAVWLASAAVLAAASYACGSVVSLVTTNFIRTHRRL 539
>gi|293333760|ref|NP_001168313.1| hypothetical protein [Zea mays]
gi|223947409|gb|ACN27788.1| unknown [Zea mays]
gi|413939284|gb|AFW73835.1| hypothetical protein ZEAMMB73_526484 [Zea mays]
Length = 538
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/458 (70%), Positives = 379/458 (82%), Gaps = 1/458 (0%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
YDW EEWYPLYL K+VPDDA L LTVFD+Q+VL++D +G LRC++DRCPHRLAKLSEGQ+
Sbjct: 82 YDWREEWYPLYLAKEVPDDAALPLTVFDRQLVLWRDAHGVLRCHEDRCPHRLAKLSEGQI 141
Query: 137 IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP 196
+DG+LECLYHGWQF+G+GKCVKIPQLP AKIPRSAC R YEV++SQGVVWVWMS PP
Sbjct: 142 VDGKLECLYHGWQFDGDGKCVKIPQLPEGAKIPRSACARNYEVRDSQGVVWVWMSDANPP 201
Query: 197 NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
+ KLPWFE +AR GF D+ST+HELPYDHSILLENLMDPAH+PISHDRTDWTAKREDAQP
Sbjct: 202 DEGKLPWFEPYARAGFTDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQP 261
Query: 257 LGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLC 316
L F+VTERT RGFAG WG+ L N LRFEAPCVL N E D K G + F+ FLC
Sbjct: 262 LFFDVTERTPRGFAGYWGRTGTPHLRNLLRFEAPCVLTNTLEFAD-KDGREQCFSAHFLC 320
Query: 317 RPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT 376
RP GQGKSML+VRFG+T RSPLAK+ P WYFHQNA KVFEQDMGFLSSQNEVL++E +PT
Sbjct: 321 RPAGQGKSMLLVRFGSTLRSPLAKVLPSWYFHQNACKVFEQDMGFLSSQNEVLLREKLPT 380
Query: 377 KELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSAS 436
+ELYLNLRSSDTWVAEYRKWMD+ GHGMPY+FGHST+S P VPAVVE APAG VAG+SAS
Sbjct: 381 RELYLNLRSSDTWVAEYRKWMDRAGHGMPYYFGHSTLSPPPVPAVVEQAPAGAVAGISAS 440
Query: 437 SPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGR 496
PAKG +G +HAPN NRYFRHV+HCKGC + +K +++ K + +AAA AILA+ R
Sbjct: 441 FPAKGGVGMVHAPNPTNRYFRHVVHCKGCRATVKKYTSLKTVFAALAAAALSAAILAATR 500
Query: 497 QWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRRL 534
QWKA +A++++ A YAC +++ TTNFIRTHRRL
Sbjct: 501 QWKAVLVAASAVLAAASYACDAVLSLITTNFIRTHRRL 538
>gi|115449167|ref|NP_001048363.1| Os02g0792800 [Oryza sativa Japonica Group]
gi|47497136|dbj|BAD19185.1| putative Rieske iron-sulfur protein Tic55 [Oryza sativa Japonica
Group]
gi|47497583|dbj|BAD19653.1| putative Rieske iron-sulfur protein Tic55 [Oryza sativa Japonica
Group]
gi|113537894|dbj|BAF10277.1| Os02g0792800 [Oryza sativa Japonica Group]
gi|125583977|gb|EAZ24908.1| hypothetical protein OsJ_08688 [Oryza sativa Japonica Group]
gi|215740658|dbj|BAG97314.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767906|dbj|BAH00135.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 539
Score = 680 bits (1755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/469 (71%), Positives = 387/469 (82%), Gaps = 1/469 (0%)
Query: 66 EERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCP 125
+E+ + A YDW EEWYPLYL K+VPDDA L LTVFD+Q+VLY+D G LRC++DRCP
Sbjct: 72 KEQEDDASAARYDWREEWYPLYLAKEVPDDAALPLTVFDRQLVLYRDAAGVLRCHEDRCP 131
Query: 126 HRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGV 185
HRLAKLSEGQL+DG+LECLYHGWQF+GEGKCVKIPQLP AKIPR+AC R+YEV++SQGV
Sbjct: 132 HRLAKLSEGQLVDGKLECLYHGWQFDGEGKCVKIPQLPDGAKIPRNACARSYEVRDSQGV 191
Query: 186 VWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
VW WMS PP+ KLPWFE +ARPGF D+ST+HELPYDHSILLENLMDPAH+PISHDRT
Sbjct: 192 VWAWMSGTNPPDERKLPWFEPYARPGFTDLSTVHELPYDHSILLENLMDPAHVPISHDRT 251
Query: 246 DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
DWTAKREDAQPL FEVTERT RGFAG WGK++ L N LRFEAPCVL N E VD K G
Sbjct: 252 DWTAKREDAQPLFFEVTERTPRGFAGYWGKQRTPHLRNLLRFEAPCVLTNTLEFVD-KDG 310
Query: 306 EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
++ F+ FLCRP GQGKSML+VRFG+T+ SPL K+ P+WYFHQNA KVFEQDMGFLSSQ
Sbjct: 311 KEQCFSAHFLCRPAGQGKSMLLVRFGSTQTSPLVKVLPRWYFHQNACKVFEQDMGFLSSQ 370
Query: 366 NEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHA 425
NEVL++E VPTKELYLNLRSSDTWVAEYR+WMD+ GHGMPY+FGHST+S P VPAVVE A
Sbjct: 371 NEVLLREKVPTKELYLNLRSSDTWVAEYRRWMDRAGHGMPYYFGHSTLSPPPVPAVVEQA 430
Query: 426 PAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAA 485
PAG VAG+SAS PAKG +G HAPN NRYFRHV+HCKGC +K +++ KN+ + +AAA
Sbjct: 431 PAGAVAGMSASFPAKGGVGATHAPNPTNRYFRHVVHCKGCRDSVKRYASLKNAFAALAAA 490
Query: 486 LTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRRL 534
AILA+ RQ KA LASA+ A YAC+ +++ TTNFIRTHRRL
Sbjct: 491 AVAAAILAATRQLKAVLLASAAALAAASYACNWVLSLITTNFIRTHRRL 539
>gi|125541435|gb|EAY87830.1| hypothetical protein OsI_09250 [Oryza sativa Indica Group]
Length = 539
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/469 (70%), Positives = 386/469 (82%), Gaps = 1/469 (0%)
Query: 66 EERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCP 125
+E+ + A YDW EEWYPLYL K+VPDDA L LTVFD+Q+VLY+D G LRC++DRCP
Sbjct: 72 KEQEDDASAARYDWREEWYPLYLAKEVPDDAALPLTVFDRQLVLYRDAAGVLRCHEDRCP 131
Query: 126 HRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGV 185
HRLAKLSEGQL+DG+LECLYHGWQF+GEGKCVKIPQLP AKIPR+AC R+YEV++SQGV
Sbjct: 132 HRLAKLSEGQLVDGKLECLYHGWQFDGEGKCVKIPQLPDGAKIPRNACARSYEVRDSQGV 191
Query: 186 VWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
VW WMS PP+ KLPWFE +ARPGF D+ST+HELPYDHSILLENLMDPAH+PISHDRT
Sbjct: 192 VWAWMSGTNPPDERKLPWFEPYARPGFTDLSTVHELPYDHSILLENLMDPAHVPISHDRT 251
Query: 246 DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
DWTAKREDAQPL FEVTERT GFAG WGK++ L N LRFEAPCVL N E VD K G
Sbjct: 252 DWTAKREDAQPLFFEVTERTPGGFAGYWGKQRTPHLRNLLRFEAPCVLTNTLEFVD-KDG 310
Query: 306 EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
++ F+ FLCRP GQGKSML+VRFG+T+ SPL K+ P+WYFHQNA KVFEQDMGFLSSQ
Sbjct: 311 KEQCFSAHFLCRPAGQGKSMLLVRFGSTQTSPLVKVLPRWYFHQNACKVFEQDMGFLSSQ 370
Query: 366 NEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHA 425
NEVL++E +PTKELYLNLRSSDTWVAEYR+WMD+ GHGMPY+FGHST+S P VPAVVE A
Sbjct: 371 NEVLLREKMPTKELYLNLRSSDTWVAEYRRWMDRAGHGMPYYFGHSTLSPPPVPAVVEQA 430
Query: 426 PAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAA 485
PAG VAG+SAS PAKG +G HAPN NRYFRHV+HCKGC +K +++ KN+ + +AAA
Sbjct: 431 PAGAVAGMSASFPAKGGVGATHAPNPTNRYFRHVVHCKGCRDSVKRYASLKNAFAALAAA 490
Query: 486 LTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRRL 534
AILA+ RQ KA LASA+ A YAC+ +++ TTNFIRTHRRL
Sbjct: 491 AVAAAILAATRQLKAVLLASAAALAAASYACNWVLSLITTNFIRTHRRL 539
>gi|168002521|ref|XP_001753962.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694938|gb|EDQ81284.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 481
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 269/470 (57%), Positives = 338/470 (71%), Gaps = 4/470 (0%)
Query: 67 ERRGERQVAD---YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDR 123
E GE V+D YDW +EWYP+YLT ++P APLGLTVFD+Q+VL+ D GEL C++DR
Sbjct: 10 EAEGESAVSDGVEYDWEKEWYPMYLTDEMPKAAPLGLTVFDRQLVLFYDDKGELNCFEDR 69
Query: 124 CPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQ 183
CPHRLAKLSEG++ DG+LECLYHGWQFEG G+C KIPQL AKIP+ AC + YEVK SQ
Sbjct: 70 CPHRLAKLSEGKMTDGKLECLYHGWQFEGSGQCTKIPQLAPGAKIPKQACAKKYEVKVSQ 129
Query: 184 GVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
GV+WVW+ + +P K+PW+E++ R GF +STIHELPYD+SILLENLMDPAHIPISHD
Sbjct: 130 GVIWVWLGDRATADPKKVPWYEHYEREGFYHLSTIHELPYDYSILLENLMDPAHIPISHD 189
Query: 244 RTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSK 303
RTD AKRE+AQ L FEVTERT RGFAG W + N RFEAPC L+N++ +VD
Sbjct: 190 RTDTNAKRENAQALVFEVTERTSRGFAGIWKEISSPEFTNTTRFEAPCCLRNDK-VVDKP 248
Query: 304 TGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLS 363
G K Y + +FLCRP+GQGKSMLIVRFG+TK + K P W+ H+ ++ VFEQDMGFL+
Sbjct: 249 DGSKDYLSAVFLCRPSGQGKSMLIVRFGSTKFPDIFKKIPGWFLHKTSNTVFEQDMGFLA 308
Query: 364 SQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVE 423
SQN L+K+ PTK+LYLNL+SSDTWV+E+RKW D+VG GMPY+FGH T S PA++E
Sbjct: 309 SQNAYLVKKNQPTKDLYLNLKSSDTWVSEFRKWNDRVGRGMPYYFGHQTTSAAINPAILE 368
Query: 424 HAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVA 483
APAG A ++S PA+G+ G M A + NRYFRHV+HCK C + F ++ +
Sbjct: 369 AAPAGFSAAAASSYPAQGSFGEMFARDPTNRYFRHVVHCKSCLKALNNFQKFQKVGIALG 428
Query: 484 AALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRR 533
T +AI S W+A + A L A YACS +A T N++R HR+
Sbjct: 429 LIATGVAITLSSVMWRASFVTIALLAFATSYACSRGVAALTVNYVRPHRK 478
>gi|168040321|ref|XP_001772643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676019|gb|EDQ62507.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 487
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/468 (57%), Positives = 342/468 (73%), Gaps = 1/468 (0%)
Query: 66 EERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCP 125
EE + V +YDW +EWYP+YLT ++P APLGLTVFD+++VL+ D GEL C++DRCP
Sbjct: 18 EEENEVKDVVEYDWEKEWYPMYLTAEMPKAAPLGLTVFDRELVLFYDDKGELHCFEDRCP 77
Query: 126 HRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGV 185
HRLAKLSEG++ DG+LECLYHGWQFEG G+C KIPQL AKIP+ AC + YEVK SQGV
Sbjct: 78 HRLAKLSEGKVTDGKLECLYHGWQFEGSGQCTKIPQLVPGAKIPKQACAKAYEVKISQGV 137
Query: 186 VWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
VWVW+ + +P KLPWFE++ R GFQ +S IHELPYD+SIL+ENLMDPAHIPISHDRT
Sbjct: 138 VWVWLGDRATADPSKLPWFEHYEREGFQHISAIHELPYDYSILVENLMDPAHIPISHDRT 197
Query: 246 DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
D +A+RE+AQ L FEVTER+ RGFAG+W + N RFEAPC+++N++E V
Sbjct: 198 DPSARRENAQALVFEVTERSSRGFAGKWKEISSPSFTNATRFEAPCIVRNDKEYVKPDGT 257
Query: 306 EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
+ H + +FLCRP GQGK MLI RFG+T K+ P WY H ++ VFEQDMGFL+SQ
Sbjct: 258 DAH-MSAVFLCRPAGQGKCMLIARFGSTNFPGSLKMIPPWYIHITSNTVFEQDMGFLASQ 316
Query: 366 NEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHA 425
NE L+K+ +PTK+LYLNL+SSDTWV+E+RKW D VGHGMPY+FGH TIS K PAVVE A
Sbjct: 317 NEDLVKKNLPTKDLYLNLKSSDTWVSEFRKWNDLVGHGMPYYFGHKTISQAKNPAVVEVA 376
Query: 426 PAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAA 485
PAG A ++S PA+G+ G M A + NRYFRHV+HC+ C S + +F T++ + A
Sbjct: 377 PAGFSAAAASSYPAQGSFGEMFARDPTNRYFRHVVHCRSCLSALGSFQTYQKVATAFGLA 436
Query: 486 LTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRR 533
+AI+ W+A + +A L A YACS IA+ T N++R HR+
Sbjct: 437 AAGVAIVLPSVVWRATLVITALLAFAAAYACSRGIAILTKNYVRPHRK 484
>gi|62320194|dbj|BAD94416.1| Rieske iron-sulfur like protein [Arabidopsis thaliana]
Length = 283
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 232/284 (81%), Positives = 256/284 (90%), Gaps = 2/284 (0%)
Query: 190 MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTA 249
MS KTPPNP+KLPWFENFARPGF D+ST HELPYDHSILLENLMDPAH+PISHDRTD+TA
Sbjct: 1 MSTKTPPNPEKLPWFENFARPGFFDISTTHELPYDHSILLENLMDPAHVPISHDRTDFTA 60
Query: 250 KREDAQPLGFEVTERTDRGFAGRWGKEKDEPL-PNFLRFEAPCVLQNNRELVDSKTGEKH 308
KREDAQPL FEVTER++RGFAG WG+EK+ N LRF+APCVLQNNRE + K G K+
Sbjct: 61 KREDAQPLVFEVTERSNRGFAGTWGREKEGGKGSNLLRFDAPCVLQNNREF-EGKDGVKN 119
Query: 309 YFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEV 368
YF+GLFLCRPTGQGKSMLIVRFG TKRSPL + P+W++HQNA KVFEQDMGFLSSQNEV
Sbjct: 120 YFSGLFLCRPTGQGKSMLIVRFGVTKRSPLVSVLPQWFWHQNACKVFEQDMGFLSSQNEV 179
Query: 369 LMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAG 428
LMKE VPTK+LYLNL+SSDTWVAEYRKWMDKVGHGMPYHFGH TISLPKVP VVEHAPAG
Sbjct: 180 LMKEKVPTKDLYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHRTISLPKVPPVVEHAPAG 239
Query: 429 LVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAF 472
L+A +SAS PAKG IGTMHAPNLANRYFRH+IHC+ CS+VIK+F
Sbjct: 240 LIAALSASYPAKGGIGTMHAPNLANRYFRHIIHCRSCSNVIKSF 283
>gi|326521744|dbj|BAK00448.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 428
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/359 (69%), Positives = 287/359 (79%), Gaps = 1/359 (0%)
Query: 176 TYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDP 235
YEV++SQGVVWVWMS +PP+ KLPWFE +ARPGF D+ST+HELPYDHSILLENLMDP
Sbjct: 71 NYEVRDSQGVVWVWMSPASPPDAKKLPWFEPYARPGFTDLSTVHELPYDHSILLENLMDP 130
Query: 236 AHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQN 295
AH+PISHDRTDWTAKREDAQPL F+V ERT RGFAG W +E+ LPN LRFEAPCVL N
Sbjct: 131 AHVPISHDRTDWTAKREDAQPLAFDVAERTARGFAGHWWRERAPHLPNLLRFEAPCVLSN 190
Query: 296 NRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVF 355
E VD K G++ F+ FLCRP GQGKSML+VRFG+T SPL K+ PKWY HQNA KVF
Sbjct: 191 TLEFVD-KDGKEQCFSAQFLCRPAGQGKSMLLVRFGSTASSPLVKVLPKWYLHQNACKVF 249
Query: 356 EQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISL 415
EQDMGFLSSQNEVL++E VPTKELYLNLRSSDTWVAEYR+WMD+ GHGMPY+FGHSTIS
Sbjct: 250 EQDMGFLSSQNEVLLREKVPTKELYLNLRSSDTWVAEYRRWMDRAGHGMPYYFGHSTISP 309
Query: 416 PKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTW 475
P VPAVVE APAG AG+SAS PAKG GT HAPN NRYFRHV+HCKGC + ++
Sbjct: 310 PPVPAVVEQAPAGAAAGISASFPAKGGAGTQHAPNPTNRYFRHVVHCKGCRDTVNRYTAL 369
Query: 476 KNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRRL 534
K + V+AA A+LA+ RQWKA L +A++ A YAC + +++ TTNFIRTHRRL
Sbjct: 370 KKAFVVLAAVAAAAAVLAATRQWKAVLLGAAAVLAAASYACGSVVSLITTNFIRTHRRL 428
>gi|238015070|gb|ACR38570.1| unknown [Zea mays]
Length = 344
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 237/345 (68%), Positives = 276/345 (80%), Gaps = 1/345 (0%)
Query: 190 MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTA 249
MS PP+ KLPWFE +AR GF D+ST+HELPYDHSILLENLMDPAH+PISHDRTDWTA
Sbjct: 1 MSDANPPDEGKLPWFEPYARAGFTDLSTVHELPYDHSILLENLMDPAHVPISHDRTDWTA 60
Query: 250 KREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHY 309
KREDAQPL F+VTERT RGFAG WG+ L N LRFEAPCVL N E D K G +
Sbjct: 61 KREDAQPLFFDVTERTPRGFAGYWGRTGTPHLRNLLRFEAPCVLTNTLEFAD-KDGREQC 119
Query: 310 FTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVL 369
F+ FLCRP GQGKSML+VRFG+T RSPLAK+ P WYFHQNA KVFEQDMGFLSSQNEVL
Sbjct: 120 FSAHFLCRPAGQGKSMLLVRFGSTLRSPLAKVLPSWYFHQNACKVFEQDMGFLSSQNEVL 179
Query: 370 MKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGL 429
++E +PT+ELYLNLRSSDTWVAEYRKWMD+ GHGMPY+FGHST+S P VPAVVE APAG
Sbjct: 180 LREKLPTRELYLNLRSSDTWVAEYRKWMDRAGHGMPYYFGHSTLSPPPVPAVVEQAPAGA 239
Query: 430 VAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVL 489
VAG+SAS PAKG +G +HAPN NRYFRHV+HCKGC + +K +++ K + +AAA
Sbjct: 240 VAGISASFPAKGGVGMVHAPNPTNRYFRHVVHCKGCRATVKKYTSLKTVFAALAAAALSA 299
Query: 490 AILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRRL 534
AILA+ RQWKA +A++++ A YAC +++ TTNFIRTHRRL
Sbjct: 300 AILAATRQWKAVLVAASAVLAAASYACDAVLSLITTNFIRTHRRL 344
>gi|388495350|gb|AFK35741.1| unknown [Lotus japonicus]
Length = 210
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 179/210 (85%), Positives = 191/210 (90%)
Query: 325 MLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLR 384
MLIVRFG TKR+P+AKLFP+WYFHQNASKVFEQDMGFLSSQNE+L+KE +PTKELYLNL+
Sbjct: 1 MLIVRFGTTKRTPVAKLFPEWYFHQNASKVFEQDMGFLSSQNEILLKEKLPTKELYLNLK 60
Query: 385 SSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIG 444
SSDTWVAEYRKWMDKVGHGMPYHFGHSTISLP PAVVEHAPAGLVAG+SASSPAKG IG
Sbjct: 61 SSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPNEPAVVEHAPAGLVAGLSASSPAKGGIG 120
Query: 445 TMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLA 504
TMHAPNLANRYFRHVIHCKGC +V+KAF WKN+L+ VA A LAIL SGRQWKA L
Sbjct: 121 TMHAPNLANRYFRHVIHCKGCRTVVKAFQAWKNALTAVAVASAALAILVSGRQWKALLLV 180
Query: 505 SASLCLAGVYACSTAIAMNTTNFIRTHRRL 534
SASLC GVYACSTAIAMNTTNFIRTHRRL
Sbjct: 181 SASLCSVGVYACSTAIAMNTTNFIRTHRRL 210
>gi|186682267|ref|YP_001865463.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186464719|gb|ACC80520.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 451
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/460 (33%), Positives = 251/460 (54%), Gaps = 36/460 (7%)
Query: 76 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQ 135
+++W + WYP+ +D+P + P +++++ VL+KD NG+L C DRC HR A+LS+GQ
Sbjct: 25 EFNWRQSWYPVCFLQDLPTNRPYTFSLYEEPFVLFKDQNGQLICLTDRCSHRAARLSDGQ 84
Query: 136 LIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 195
+IDG++EC YHGWQF G+C+ IPQL +DAKIP +ACV +++V E QG++W+W +
Sbjct: 85 IIDGKIECSYHGWQFGNNGQCLHIPQLASDAKIPVNACVPSFKVLERQGIIWMWAGEAET 144
Query: 196 PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ 255
+ +P ++ +P ++ + +LPYD S +EN++DPAH+PISHD REDAQ
Sbjct: 145 AIDELIPSLPDWNKPECFNLDYVRDLPYDQSYFIENIIDPAHVPISHDGI--IGSREDAQ 202
Query: 256 PLGFEVTERTDRGFAGRWGKEKDEPLPNF-LRFEAPCVLQNNRELVDSKTGEKHYFTGLF 314
L EV E +G GRW + + LP L F AP ++ + + + G K + T L+
Sbjct: 203 ALDIEVIESNIQGIKGRWQRTRTPNLPWISLDFIAPNLIL--YKFANVQQG-KFWGTALY 259
Query: 315 LCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH-QNASKVFEQDMGFLSSQNEVLMKET 373
P G+ + +++R + KL P W H +K+ E D+ + Q + +
Sbjct: 260 SI-PLGKNRCRILIRNYSNSFPQKTKLMPPWLDHILIRNKILEGDLQLVVEQKAQIERLK 318
Query: 374 VPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGV 433
KE+YL L++SDT V EYRKW+DK G +P++ G+ST +
Sbjct: 319 KNLKEVYLPLKTSDTLVVEYRKWLDKFGSSLPFYQGYST------------------SKN 360
Query: 434 SASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILA 493
+S + + T+ +R+ +H I C C+ + + + S VA AL + ILA
Sbjct: 361 VGNSESDEKLITL------DRFSQHTIICHSCNQAYQVTNKVRQSCIGVAIALAAIGILA 414
Query: 494 SGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRR 533
+ + +A+ S+ + + + A + T+F R++ R
Sbjct: 415 DDSRIR---IAAISVSITAIVISAMAQTLK-THFERSYTR 450
>gi|425455977|ref|ZP_18835688.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9807]
gi|389803035|emb|CCI17994.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9807]
Length = 446
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 223/413 (53%), Gaps = 34/413 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ +D + P +++ Q +++++D G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQEGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYRVVERQGVLWVWLGEEETAKESDIP 140
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
++ P + +LPY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYVIDLPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 263 ERTDRGFAGRWGKEKD-EPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPT-G 320
E + RG +W ++ + +L F AP ++ + + H++ GL L + G
Sbjct: 201 EISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSMPNP-----HWYAGLALYGISLG 255
Query: 321 QGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELY 380
QG+S L+VR + +W H S++ E D+ + SQ +++ K ++LY
Sbjct: 256 QGRSRLLVRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 381 LNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAK 440
L L+SSD V E R+W D+ G PY+ G+++ + S P
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSFPYYQGYTS---------------QRTTAIDLSDPLP 360
Query: 441 GAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILA 493
+RY RH +HC+ CS + K ++ L +LAIL+
Sbjct: 361 -----------LDRYSRHTVHCRTCSDAHEKMVKTKQIAILMGILLVLLAILS 402
>gi|332712318|ref|ZP_08432246.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
gi|332349124|gb|EGJ28736.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
Length = 452
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 139/358 (38%), Positives = 206/358 (57%), Gaps = 12/358 (3%)
Query: 76 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQ 135
+++W + WYP+ +D+P D P +++D+ +VL+++ +G+L C +RCPHR AKLSEGQ
Sbjct: 25 EFNWQQCWYPVTFVQDLPTDRPYSFSLYDEPLVLFRNQDGKLACLTNRCPHRAAKLSEGQ 84
Query: 136 LIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 195
+IDG++ECLYHGWQF +G+C+ IPQLP DAKIP ACV+++ V E QG+VWVWM +
Sbjct: 85 IIDGKIECLYHGWQFGRDGQCLHIPQLPEDAKIPAKACVQSFTVVERQGIVWVWMGKPEA 144
Query: 196 PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ 255
+ + +P + P + +LPYD + +EN +DP+H+ ISH+ T + R+ AQ
Sbjct: 145 ADQEGIPTVADLDNPTVASSDYMIDLPYDQTYFIENALDPSHLYISHEGT--LSSRKYAQ 202
Query: 256 PLGFEVTERTDRGFAGRWGK--EKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTG- 312
PL EV E + G GR+ K +K+ P N L F AP N S +GEK G
Sbjct: 203 PLEMEVLESSTFGIRGRYRKTRQKNSPWVN-LDFVAP-----NLVTYRSSSGEKSVRIGG 256
Query: 313 -LFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMK 371
P G+GK +I+R + KL P+W H K E+D+ + Q + +
Sbjct: 257 AALYSLPLGKGKCRIIIRNYNNHSTWKLKLQPRWMEHWYRDKFLEEDLPLVVGQQAEVER 316
Query: 372 ETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGL 429
LYL L++SD + EYRKW+DK G +P++ G+ST L + PA L
Sbjct: 317 LGTSLNSLYLQLKTSDMLLIEYRKWLDKFGTSLPFYQGYSTRKLSQKEREDNQQPAPL 374
>gi|425447801|ref|ZP_18827783.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9443]
gi|389731630|emb|CCI04395.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9443]
Length = 446
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 221/413 (53%), Gaps = 34/413 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ +D + P +++ Q +++++D G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQEGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYRVVERQGVLWVWLGEEETAKESDIP 140
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
++ P + +LPY+ LLENL DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYVIDLPYEQGYLLENLFDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 263 ERTDRGFAGRWGKEKD-EPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPT-G 320
E + RG +W + + +L F AP ++ + + H++ GL L + G
Sbjct: 201 EISARGIRSQWRNSGNPQESWKYLDFIAPNLVHYRFSMPNP-----HWYAGLALYGISLG 255
Query: 321 QGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELY 380
QG+S L+VR + +W H S++ E D+ + SQ +++ K ++LY
Sbjct: 256 QGRSRLLVRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 381 LNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAK 440
L L+SSD V E R+W D+ G PY+ G+++ + S P
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSFPYYQGYTS---------------QRTTAIDLSDPLP 360
Query: 441 GAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILA 493
+RY RH +HC+ CS + K ++ L +LAIL+
Sbjct: 361 -----------LDRYSRHTVHCRTCSDAHEKMVKTKQIAILMGILLVLLAILS 402
>gi|257059415|ref|YP_003137303.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8802]
gi|256589581|gb|ACV00468.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8802]
Length = 450
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 225/437 (51%), Gaps = 33/437 (7%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
DW WYP+ +D P P G T++D+ VL+ + G+L C QD CPHR AKLS+GQ++
Sbjct: 27 DWKNCWYPITFVQDFPKSRPYGFTLYDEPFVLFVNKQGKLVCLQDICPHRAAKLSDGQIL 86
Query: 138 DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN 197
DG LECLYHGWQF EGKCV IPQLP D IP++AC+ ++ V + QG++W W +K +
Sbjct: 87 DGNLECLYHGWQFNDEGKCVHIPQLPDDTPIPKNACITSFFVVQKQGIIWFWRGKKEEAD 146
Query: 198 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPL 257
++P N + + +LPYD + L+EN++DPAH+ ISH + R++AQPL
Sbjct: 147 ETRIPTIANLDKRDMMVTDCMIDLPYDQTYLIENVVDPAHVHISHHGS--LGNRKNAQPL 204
Query: 258 GFEVTERTDRGFAGRWGKEKDEPLPNF-LRFEAPCVLQNNRELVDSKTGEKHYFTGLFLC 316
EV E++ G + K + L F AP ++ L + G ++
Sbjct: 205 TMEVKEKSIEGIKSVYKYAKTAAMGWITLDFIAPNLVMYEFTLPNQLMGGTALYS----- 259
Query: 317 RPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT 376
P+G+G L++R + + A+L P+W H ++++ E+D F+ ++ +L K
Sbjct: 260 LPSGKGSCRLLLRNYSNIPNWKARLKPRWLLHLGSNRILEEDSVFIMAEQSILEKSKQTM 319
Query: 377 KELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSAS 436
++L L L++SD V EYRKW+D G +P++ G++T + S
Sbjct: 320 QDLILPLKTSDLLVVEYRKWLDTFGKALPFYQGYTT---------------------AKS 358
Query: 437 SPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGR 496
SP G +R+ +H C C + + L VA L AIL G
Sbjct: 359 SPKTGE--NSQTKVTLDRFKQHTQICHSCRQTYQRIIITQKVLIAVAILLAACAILTDGT 416
Query: 497 QWK--AFCLASASLCLA 511
+ + + L+ SL +A
Sbjct: 417 KLEIISILLSLFSLIIA 433
>gi|218246369|ref|YP_002371740.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8801]
gi|218166847|gb|ACK65584.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8801]
Length = 450
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 225/437 (51%), Gaps = 33/437 (7%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
DW WYP+ +D P P G T++D+ VL+ + G+L C QD CPHR AKLS+GQ++
Sbjct: 27 DWKNCWYPITFVQDFPKSRPYGFTLYDEPFVLFVNNQGKLVCLQDICPHRAAKLSDGQIL 86
Query: 138 DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN 197
DG LECLYHGWQF EGKCV IPQLP D IP++AC+ ++ V + QG++W W +K +
Sbjct: 87 DGNLECLYHGWQFNDEGKCVHIPQLPDDTPIPKNACITSFFVVQKQGIIWFWRGKKEEAD 146
Query: 198 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPL 257
++P N + + +LPYD + L+EN++DPAH+ ISH + R++AQPL
Sbjct: 147 ETRIPTIANLDKRDMMVTDCMIDLPYDQTYLIENVVDPAHVHISHHGS--LGNRKNAQPL 204
Query: 258 GFEVTERTDRGFAGRWGKEKDEPLPNF-LRFEAPCVLQNNRELVDSKTGEKHYFTGLFLC 316
EV E++ G + K + L F AP ++ L + G ++
Sbjct: 205 TMEVKEKSIEGIKSVYKYAKTAAMGWITLDFIAPNLVMYEFTLPNQLMGGTALYS----- 259
Query: 317 RPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT 376
P+G+G L++R + + A+L P+W H ++++ E+D F+ ++ +L K
Sbjct: 260 LPSGKGSCRLLLRNYSNIPNWKARLKPRWLLHLGSNRILEEDSVFIMAEQSILEKSRQTM 319
Query: 377 KELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSAS 436
++L L L++SD V EYRKW+D G +P++ G++T + S
Sbjct: 320 QDLILPLKTSDLLVVEYRKWLDTFGKALPFYQGYTT---------------------AKS 358
Query: 437 SPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGR 496
SP G +R+ +H C C + + L VA L AIL G
Sbjct: 359 SPKTGE--NSQTKVTLDRFKQHTQICHSCRQTHQRIIITQKVLIAVAILLAACAILTDGT 416
Query: 497 QWK--AFCLASASLCLA 511
+ + + L+ SL +A
Sbjct: 417 KLEIISILLSLFSLIIA 433
>gi|425448723|ref|ZP_18828567.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 7941]
gi|389764003|emb|CCI09609.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 7941]
Length = 446
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 154/453 (33%), Positives = 237/453 (52%), Gaps = 37/453 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ +D + P +++ Q +++++D G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESDIP 140
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYLIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 263 ERTDRGFAGRWGKEKD-EPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPT-G 320
E + RG +W + + +L F AP ++ L + H+ GL L + G
Sbjct: 201 EISARGIRSQWRNSHNPQESWKYLDFIAPNLVHYRFSLPNP-----HWCAGLALYGISLG 255
Query: 321 QGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELY 380
QG+S L+VR + +W H S++ E D+ + SQ +++ K ++LY
Sbjct: 256 QGRSRLLVRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 381 LNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAK 440
L L+SSD V E R+W D+ G PY+ G+++ + A+ P L
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSFPYYQGYTS---QRTTAIDLFDPLPL----------- 361
Query: 441 GAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKA 500
+RY RH +HC+ CS+ + K ++ L +LAIL+ ++
Sbjct: 362 ------------DRYSRHTVHCRTCSAAHENMVKTKQIAILMGILLVLLAILSPN---QS 406
Query: 501 FCLASASLCLAGVYACSTAIAMNTTNFIRTHRR 533
+A + A + A T F RTH +
Sbjct: 407 IYQITALIFAILALAVAIAANYTRTKFERTHEK 439
>gi|425470320|ref|ZP_18849190.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9701]
gi|389884067|emb|CCI35571.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9701]
Length = 446
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 221/416 (53%), Gaps = 40/416 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ +D + P +++ Q +++++D G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYRVMERQGVLWVWLGEEETAKESDIP 140
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVYTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 263 ERTDRGFAGRWGKEKD-EPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQ 321
E + RG +W ++ + +L F AP ++ L + G+ L GQ
Sbjct: 201 EISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPDWCAGLALYGISL----GQ 256
Query: 322 GKSMLIVR----FGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTK 377
G+S L++R F R + +W H S++ E D+ + SQ +++ K +
Sbjct: 257 GRSRLLMRRYQNFAVNSR----QYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQ 312
Query: 378 ELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASS 437
+LYL L+SSD V E R+W D+ G PY+ G+++ + S
Sbjct: 313 KLYLPLKSSDALVIELRQWFDRYGDSFPYYQGYTSQR---------------TTAIDLSD 357
Query: 438 PAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILA 493
P +RY RH +HC+ CS+ + K ++ L +LAIL+
Sbjct: 358 PLP-----------LDRYSRHTVHCRTCSAAHENMVKTKQIAILMGILLVLLAILS 402
>gi|425441278|ref|ZP_18821558.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9717]
gi|389718043|emb|CCH97943.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9717]
Length = 446
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 221/413 (53%), Gaps = 34/413 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ +D + P +++ Q +++++D G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESDIP 140
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 263 ERTDRGFAGRWGKEKD-EPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPT-G 320
E + RG +W ++ + +L F AP ++ L + H+ GL L + G
Sbjct: 201 EISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFALPNP-----HWCAGLALYGISLG 255
Query: 321 QGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELY 380
QG+S L++R + +W H S++ E D+ + SQ +++ K ++LY
Sbjct: 256 QGRSRLLMRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 381 LNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAK 440
L L+SSD V E R+W D+ G PY+ G+++ +
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSFPYYQGYTS--------------------------QR 349
Query: 441 GAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILA 493
+ P +RY RH +HC+ CS + K ++ L +LAIL+
Sbjct: 350 TTALDLSDPLPLDRYSRHTVHCRTCSDAHENMVKTKQIAILMGILLVLLAILS 402
>gi|428311820|ref|YP_007122797.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428253432|gb|AFZ19391.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 447
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/427 (33%), Positives = 225/427 (52%), Gaps = 38/427 (8%)
Query: 73 QVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLS 132
Q +++W + WYP+ +D+P++ P +++D+ VL+++ + +L C DRCPHR AKLS
Sbjct: 22 QEEEFNWRQCWYPVTFVQDLPENRPYSFSLYDEPFVLFRNQDKKLICLTDRCPHRAAKLS 81
Query: 133 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ 192
+GQ++DG++ECLYHGWQF EG+C+ IPQLP DAKIP ACV++++V E QG++W+W
Sbjct: 82 DGQILDGKIECLYHGWQFGSEGQCLHIPQLPTDAKIPIKACVQSFKVIERQGMIWMWAGN 141
Query: 193 KTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKRE 252
+ D++P +PGF I EL D S ++E+++DPAHI I+H RE
Sbjct: 142 AEAADEDRIPTIPKLGKPGFVYSDKITELSCDISYVIEHMLDPAHIHIAHHGNQ--GNRE 199
Query: 253 DAQPLGFEVTERTDRGFAGRWGKEK--DEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYF 310
AQPL E+ E + GF GR+ + + D+ N L F P + + EK +F
Sbjct: 200 KAQPLEMEIIESSVEGFRGRFRETRLPDQTWRN-LDFIVPSLAH-----LHFPIPEKGWF 253
Query: 311 TG-LFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVL 369
G F P G+G+ ++ R + KL P+W+ H +K+ E+D+ L Q + +
Sbjct: 254 FGQAFYFFPLGKGRCRILTRSYRNFVTLPVKLMPRWWIHLKQNKILEEDLAQLLGQQQEV 313
Query: 370 MKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGL 429
+ K++Y + + DT+ YR+W+D+ G +P++ G++T KV E
Sbjct: 314 ERLGQTIKQVYAPIETCDTFAIAYRQWVDRYGSSLPFYRGYTT---SKVSQNTEDC---- 366
Query: 430 VAGVSASSPAKGAIGTMHAPNLA--NRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALT 487
PNL R RH C C + + K + V+A L
Sbjct: 367 ------------------QPNLMPIERSLRHTELCSSCHRAYQLSRSLKQTFVVIAIFLA 408
Query: 488 VLAILAS 494
LAI+
Sbjct: 409 ALAIITD 415
>gi|425464229|ref|ZP_18843551.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9809]
gi|389833823|emb|CCI21361.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9809]
Length = 446
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 212/388 (54%), Gaps = 34/388 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ +D + P +++ Q +++++D G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESDIP 140
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 263 ERTDRGFAGRWGKEKD-EPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPT-G 320
E + RG +W ++ + +L F AP ++ L + H+ GL L + G
Sbjct: 201 EISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNP-----HWCAGLALYGISLG 255
Query: 321 QGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELY 380
QG+S L++R + +W H S++ E D+ + SQ +++ K ++LY
Sbjct: 256 QGRSRLLMRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 381 LNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAK 440
L L+SSD V E R+W D+ G +PY+ G+++ + S P
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSLPYYQGYTSQR---------------TTAIDLSDPLP 360
Query: 441 GAIGTMHAPNLANRYFRHVIHCKGCSSV 468
+RY RH +HC+ CS+
Sbjct: 361 -----------LDRYSRHTVHCRTCSTA 377
>gi|440753320|ref|ZP_20932523.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
gi|440177813|gb|ELP57086.1| rieske [2Fe-2S] domain protein [Microcystis aeruginosa TAIHU98]
Length = 446
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 213/388 (54%), Gaps = 34/388 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ +D + P +++ Q +++++D G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESDIP 140
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYLIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 263 ERTDRGFAGRWGKEKD-EPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPT-G 320
E + RG +W ++ + +L F AP ++ L + H+ GL L + G
Sbjct: 201 EISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNP-----HWCAGLALYGISLG 255
Query: 321 QGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELY 380
QG+S L+VR + +W H S++ E D+ + SQ +++ K ++LY
Sbjct: 256 QGRSRLLVRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 381 LNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAK 440
L L+SSD V E R+W D+ G PY+ G+++ + A+ P L
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSFPYYQGYTS---QRTTAIDLFDPLPL----------- 361
Query: 441 GAIGTMHAPNLANRYFRHVIHCKGCSSV 468
+RY RH +HC+ CS+
Sbjct: 362 ------------DRYSRHTVHCRTCSAA 377
>gi|425460637|ref|ZP_18840118.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9808]
gi|389826681|emb|CCI22681.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9808]
Length = 446
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 208/386 (53%), Gaps = 32/386 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ +D + P +++ Q +++++D G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESDIP 140
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 263 ERTDRGFAGRWGKEKD-EPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQ 321
E + RG +W ++ + +L F AP ++ L + G+ L GQ
Sbjct: 201 EVSARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNPDWCAGLALYGISL----GQ 256
Query: 322 GKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYL 381
G+S L+VR + +W H S++ E D+ + SQ +++ K ++LYL
Sbjct: 257 GRSRLLVRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLYL 316
Query: 382 NLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKG 441
L+SSD V E R+W D+ G PY+ G+++ + S P
Sbjct: 317 PLKSSDALVIELRQWFDRYGDSFPYYQGYTSQR---------------TTAIDLSDPLP- 360
Query: 442 AIGTMHAPNLANRYFRHVIHCKGCSS 467
+RY RH +HC+ CS+
Sbjct: 361 ----------LDRYSRHTVHCRTCSA 376
>gi|166363589|ref|YP_001655862.1| dioxygenase Rieske iron-sulfur component [Microcystis aeruginosa
NIES-843]
gi|166085962|dbj|BAG00670.1| probable dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa NIES-843]
Length = 446
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 210/388 (54%), Gaps = 34/388 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ +D + P +++ Q +++++D G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVMERQGVLWVWLGEEETAKESDIP 140
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 263 ERTDRGFAGRWGKEKD-EPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPT-G 320
E + RG +W ++ + +L F AP ++ L + H+ GL L + G
Sbjct: 201 EVSARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNP-----HWCAGLALYGISLG 255
Query: 321 QGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELY 380
QG+S L++R + +W H S++ E D+ + SQ +++ K ++LY
Sbjct: 256 QGRSRLLMRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 381 LNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAK 440
L L+SSD V E R+W D+ G PY+ G+++ + S P
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSFPYYQGYTSQR---------------TTAIDLSDPLP 360
Query: 441 GAIGTMHAPNLANRYFRHVIHCKGCSSV 468
+RY RH +HC+ CS
Sbjct: 361 -----------LDRYSRHTVHCRTCSDA 377
>gi|425437604|ref|ZP_18818019.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9432]
gi|389677378|emb|CCH93660.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9432]
Length = 446
Score = 258 bits (659), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 213/388 (54%), Gaps = 34/388 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ +D + P +++ Q +++++D G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESDIP 140
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYLIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 263 ERTDRGFAGRWGKEKD-EPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPT-G 320
E + RG +W ++ + +L F AP ++ L + H+ GL L + G
Sbjct: 201 EISARGIRSQWRNSRNPQESWKYLDFIAPNLVHYRFSLPNP-----HWCAGLALYGISLG 255
Query: 321 QGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELY 380
QG+S L++R + +W H S++ E D+ + SQ +++ K ++LY
Sbjct: 256 QGRSRLLMRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 381 LNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAK 440
L L+SSD V E R+W D+ G PY+ G+++ + A+ P L
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSFPYYQGYTS---QRTTAIDLFDPLPL----------- 361
Query: 441 GAIGTMHAPNLANRYFRHVIHCKGCSSV 468
+RY RH +HC+ CS+
Sbjct: 362 ------------DRYSRHTVHCRTCSAA 377
>gi|422305128|ref|ZP_16392465.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9806]
gi|389789620|emb|CCI14428.1| putative dioxygenase Rieske iron-sulfur component [Microcystis
aeruginosa PCC 9806]
Length = 446
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/388 (35%), Positives = 210/388 (54%), Gaps = 34/388 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ +D + P +++ Q +++++D G+ C DRCPHRLAKLS GQ+I GRLE
Sbjct: 22 WYPVLFVQDWQKN-PYSFSLYGQPLLIFRDQQGKWGCLLDRCPHRLAKLSTGQMIAGRLE 80
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
CLYHGWQFE +GKC IPQLP + IPR+A V++Y V E QGV+WVW+ ++ +P
Sbjct: 81 CLYHGWQFETDGKCSHIPQLPVNTPIPRNAKVKSYGVVERQGVLWVWLGEEETAKESDIP 140
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
++ P + + PY+ LLENL+DPAH+ ISHDR+++ AKRE+AQPL F++
Sbjct: 141 IIKDLEDPNCVHTDYVIDFPYEQGYLLENLLDPAHVNISHDRSEFGAKRENAQPLAFQIL 200
Query: 263 ERTDRGFAGRWGKEKD-EPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPT-G 320
E + RG +W + + +L F AP ++ L + H+ GL L + G
Sbjct: 201 EVSARGIRSQWRNSCNPQESWKYLDFIAPNLVHYRFSLPNP-----HWCAGLALYGISLG 255
Query: 321 QGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELY 380
QG+S L++R + +W H S++ E D+ + SQ +++ K ++LY
Sbjct: 256 QGRSRLLMRRYQNFAVNSRQYRWRWLEHLRQSRILEDDLPLIQSQQQMVEKSRDSLQKLY 315
Query: 381 LNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAK 440
L L+SSD V E R+W D+ G PY+ G+++ + S P
Sbjct: 316 LPLKSSDALVIELRQWFDRYGDSFPYYQGYTSQR---------------TTAIDLSDPLP 360
Query: 441 GAIGTMHAPNLANRYFRHVIHCKGCSSV 468
+RY RH +HC+ CS+
Sbjct: 361 -----------LDRYSRHTVHCRTCSTA 377
>gi|427730555|ref|YP_007076792.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427366474|gb|AFY49195.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 453
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 146/411 (35%), Positives = 219/411 (53%), Gaps = 40/411 (9%)
Query: 76 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQ 135
D DW WYP+ +D+P + P ++++Q +VL++ +G+L C D CPHR AKLS+GQ
Sbjct: 25 DLDWKNCWYPITFLQDLPKNRPYSFSLYNQSLVLFRTPDGKLGCLTDICPHRAAKLSDGQ 84
Query: 136 LIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 195
+IDGR+ECLYHGWQF +GKC+ IPQL DAKIP++ CV++Y V E QG+VW+W +
Sbjct: 85 IIDGRIECLYHGWQFGTDGKCLHIPQLAHDAKIPQNTCVKSYVVVEHQGIVWIWAGEAAA 144
Query: 196 PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ 255
+ ++P F P F + + E+PYD + +EN +DPAH+PI+H ++ R+DAQ
Sbjct: 145 VDEKRIPNLLEFDDPKFFSLDYVFEVPYDETYFIENALDPAHVPINHHGSE--MNRQDAQ 202
Query: 256 PLGFEVTERTDRGFAGRWGKEKDEPLPNF----LRFEAPCVLQNNRELVDSKTGEKHYFT 311
PL EV + G GR+ +D P+ L F AP + D H
Sbjct: 203 PLEIEVLATSITGIKGRY---RDTRTPDAKWVKLDFLAPNSVVYG--FYDLPKPGFHSGL 257
Query: 312 GLFLCRPTGQGKSMLIVRF---GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEV 368
L+L P + ++ RF +T+R +L P+W H ++V E+D + E
Sbjct: 258 ALYLL-PKNPTQCRVLARFFQNFSTRRK--NQLEPRWLSHLFRNRVVEEDRYMIKGVQEQ 314
Query: 369 LMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAG 428
+ + KELYL L++SD V EYRKW+DK G +PY+ G+ST S P +
Sbjct: 315 VERSGQSLKELYLPLKTSDMLVIEYRKWLDKYGASLPYYQGYST-SKPHI---------- 363
Query: 429 LVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSL 479
+ S+P+ +L +R+ RH C C + + K S
Sbjct: 364 ---HMDESNPSS---------SLGDRFERHTKICSSCYRAYQVTNLLKQSF 402
>gi|17232499|ref|NP_489047.1| hypothetical protein alr5007 [Nostoc sp. PCC 7120]
gi|17134145|dbj|BAB76706.1| alr5007 [Nostoc sp. PCC 7120]
Length = 450
Score = 248 bits (633), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 227/460 (49%), Gaps = 37/460 (8%)
Query: 76 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQ 135
+++W WYP+ +D P + P +++D+ VL+++ +G+L C D CPHR AKLS+GQ
Sbjct: 25 EFNWRHCWYPITFLQDFPKELPYSFSLYDEPFVLFRNQDGKLGCLPDICPHRAAKLSDGQ 84
Query: 136 LIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 195
+IDG++ECLYHGWQF +G+C+ IPQLP +A IP++ACV+++ + E QG+VW+W +
Sbjct: 85 IIDGKIECLYHGWQFGTDGQCLHIPQLPKEATIPKNACVQSFAIVERQGIVWMWAGEADA 144
Query: 196 PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ 255
+ +P +P F + +PYD + L+EN +DPAH+PISH+ T R +A
Sbjct: 145 ADETLIPAIPELDKPEFVTTDFMCNIPYDQNTLIENAIDPAHVPISHNGT--LGNRAEAL 202
Query: 256 PLGFEVTERTDRGFAGRWGKEKDEPLPNF-LRFEAPCVLQNNRELVDSKTGEKHYFTG-L 313
PL E+ ++ +G GR+ P + F AP ++ L E+ ++ G
Sbjct: 203 PLEMEIIAKSVQGICGRYRNVSSSLSPWININFVAPNLVM----LYIPINEERGWYRGAA 258
Query: 314 FLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKET 373
P G+ + ++ R KL P+W H KV +QDM + Q + + +
Sbjct: 259 AYSIPLGKNQCRVLFRAFQNFSQWRLKLTPRWLEHWYRQKVLQQDMQQAAGQQKHIERLI 318
Query: 374 VPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGV 433
+ELYL L++SD + EYRKW+DK G +P++ G++T +V
Sbjct: 319 KSPRELYLPLKTSDLFPVEYRKWLDKYGSSLPFYQGYTTCKTNYEQKIV----------- 367
Query: 434 SASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILA 493
+ + +R+ H C C + K+ L VA L AIL
Sbjct: 368 --------------SLSTNDRFESHTQICSSCDRAYRVTKLVKHILVSVAITLAAFAILT 413
Query: 494 SGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIRTHRR 533
+ + ++ L + V+ T F R+ R
Sbjct: 414 DDSWISSVAVVTSLLAVILVFIAQKV----KTKFERSDTR 449
>gi|254413280|ref|ZP_05027051.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
gi|196179900|gb|EDX74893.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
Length = 449
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 192/340 (56%), Gaps = 10/340 (2%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
++++W WYP+ +D D P G +++D+ V++K EL C DRCPHR AKLS+G
Sbjct: 24 SEFNWRNCWYPICFRQDFAKDRPYGFSLYDEPFVIFKHQE-ELICLTDRCPHRAAKLSDG 82
Query: 135 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
QLIDG+LECLYHGWQF EG+C+ IPQL AD IP +A VR+++V E QG++W+W
Sbjct: 83 QLIDGKLECLYHGWQFGHEGQCLHIPQLSADGTIPVNANVRSHKVVERQGLIWIWPGAAE 142
Query: 195 PPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDA 254
+ +P +PGF + E+P D S +LE+++DPAHI I+H R A
Sbjct: 143 LADEQAIPTIPQLDQPGFVHSDKLTEVPCDISYVLEHMLDPAHIHITHHGNQ--GDRAKA 200
Query: 255 QPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFE--APCVLQNNRELVDSKTGEKHYFTG 312
QPL E+ E + GF G+ + EP +++F+ AP + + D + +F
Sbjct: 201 QPLEMEILESSVNGFRGQ-SRNTREPNSTWIKFDFIAPSLAHFYFSIPD----KDWFFGQ 255
Query: 313 LFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKE 372
F P +GK ++ R + KL P+W+ H +K+ QD+ L Q + +
Sbjct: 256 AFYLFPLSKGKCRILSRTYRNFVTQPVKLMPRWWTHLKQNKILAQDISILLGQQHEVERL 315
Query: 373 TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHST 412
P K++Y + + DT+ EYRKW+D+VG +PY+ G+ T
Sbjct: 316 GEPVKQVYSPIPTCDTFAMEYRKWLDRVGASLPYYRGYLT 355
>gi|388510972|gb|AFK43552.1| unknown [Medicago truncatula]
Length = 197
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 112/186 (60%), Positives = 138/186 (74%), Gaps = 13/186 (6%)
Query: 3 LSLRSLFFSPLLKIPSPKL---TPPTTNVIISLNK-TPKSRKCHA----VTDRSSTSTV- 53
L ++ F P+ PS ++ T P+++ +LNK SR+ HA T T+++
Sbjct: 9 LPTKTHFALPVSPPPSKQILLWTSPSSSFSFNLNKGLSSSRRKHAGYLPATADVKTASIL 68
Query: 54 ----GDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL 109
D KVLVGP+S +ERRGER++A YDW EEWYPLYLTK+VPDDAPLGLTVFD+ +VL
Sbjct: 69 LDVEEDQKVLVGPSSEQERRGERELAAYDWKEEWYPLYLTKNVPDDAPLGLTVFDKNLVL 128
Query: 110 YKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP 169
+KDGN + +CY+DRCPHRLAKLSEGQLIDGRL CLYHGWQFEGEGKCVKIPQLPADAKIP
Sbjct: 129 FKDGNDQFQCYEDRCPHRLAKLSEGQLIDGRLGCLYHGWQFEGEGKCVKIPQLPADAKIP 188
Query: 170 RSACVR 175
++
Sbjct: 189 GQPVLK 194
>gi|145353812|ref|XP_001421195.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581432|gb|ABO99488.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 492
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/444 (33%), Positives = 204/444 (45%), Gaps = 65/444 (14%)
Query: 62 PASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQ 121
P SAE R YDW WYP DV DAPL T+ + +V ++D +GE+RC
Sbjct: 20 PVSAEAR-----AEAYDWRAHWYPAAYVADVEKDAPLTFTLLGEPLVFWRDKSGEMRCVA 74
Query: 122 DRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQ------LPADAKIPRSACV 174
DRCPHRL LSEG++ + G LEC YHGW F GEGKC IPQ L K PRS CV
Sbjct: 75 DRCPHRLVPLSEGRVNETGELECGYHGWTFTGEGKCTSIPQIEQGTGLETALKSPRS-CV 133
Query: 175 RTYEVKESQGVVWVWMS--QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENL 232
Y KE+QG++WV+ + K P LP + P +LP D + LLEN+
Sbjct: 134 AAYPTKEAQGMLWVYPTSMDKAPATLPDLPLIPEYDDPECVCQDIFRDLPMDWATLLENV 193
Query: 233 MDPAHIPISHDRTDWTAKREDAQPLGFEVTER---TDRGFAGRW--GKEKDEPLPNFLRF 287
MD +H+P +H + KRE+A P+ E+ T GF G W G K + + F
Sbjct: 194 MDVSHVPFTHHNS--VGKRENATPVNLELASAAGVTANGFEGIWKEGPRKGKYGSQYTEF 251
Query: 288 EAPCVLQNNRELVDSKTGEKHYFTGLFLCR--PTGQGKSMLIVRFGATKRSPLAK----L 341
+AP ++++ T + FT L + PT G+ L+ RF +S L + L
Sbjct: 252 KAPTLMRH--------TLKTEAFTTLTVVYAVPTTPGRCRLMARFPFIFKSALPRFFFGL 303
Query: 342 FPKWYFHQNASKVFEQDMGFLSSQN---EVLMKETVPTKELYLNLRSSDTWVAEYRKWMD 398
+P+W+ H N + + E D FL Q EV KE + +D +V+ +RKW+
Sbjct: 304 YPQWFSHTNQNAILEDDQIFLHKQERLIEVEQKEGKSYAQSCYMPTKADVYVSAFRKWIV 363
Query: 399 KVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRH 458
V G P LP E L +RY H
Sbjct: 364 DVAGGGPAWPKDMPTDLPPQETTRE--------------------------ALLDRYHSH 397
Query: 459 VIHCKGCSSVIKAFSTWKNSLSVV 482
I+CK C+S + + +L V+
Sbjct: 398 TINCKSCASALAKIGKARKALRVL 421
>gi|383163898|gb|AFG64694.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163899|gb|AFG64695.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163900|gb|AFG64696.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163902|gb|AFG64697.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163903|gb|AFG64698.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163904|gb|AFG64699.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163905|gb|AFG64700.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163906|gb|AFG64701.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163907|gb|AFG64702.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163908|gb|AFG64703.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163909|gb|AFG64704.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163911|gb|AFG64705.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
gi|383163912|gb|AFG64706.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
Length = 143
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
Query: 258 GFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCR 317
GFEVTERT RGFAGRWG+ + N LRFEAPCVL+N++E VD K G K+Y + LFLCR
Sbjct: 1 GFEVTERTPRGFAGRWGEASNATFANTLRFEAPCVLRNDKEYVD-KDGNKNYSSALFLCR 59
Query: 318 PTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTK 377
P+GQGKSMLIVRFG+T+ + L P W HQ +++VFEQDMGFLSSQNE+L+++ VPTK
Sbjct: 60 PSGQGKSMLIVRFGSTQFNSRFTLIPNWVIHQTSNRVFEQDMGFLSSQNEILLRKKVPTK 119
Query: 378 ELYLNLRSSDTWVAEYRKWMDKVG 401
+LYLNLRS DTWV EYR+W+DKVG
Sbjct: 120 DLYLNLRSCDTWVTEYRRWLDKVG 143
>gi|361066713|gb|AEW07668.1| Pinus taeda anonymous locus 0_8482_01 genomic sequence
Length = 143
Score = 208 bits (530), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 116/144 (80%), Gaps = 1/144 (0%)
Query: 258 GFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCR 317
GFEVTERT RGFAGRWG+ + N LRFEAPCVL+N++E VD K G K Y + LFLCR
Sbjct: 1 GFEVTERTPRGFAGRWGEASNATFANTLRFEAPCVLRNDKEYVD-KDGNKKYSSALFLCR 59
Query: 318 PTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTK 377
P+GQGKSMLIVRFG+T+ + L P W HQ +++VFEQDMGFLSSQNE+L+++ VPTK
Sbjct: 60 PSGQGKSMLIVRFGSTQINSRFTLIPNWVIHQTSNRVFEQDMGFLSSQNEILLRKKVPTK 119
Query: 378 ELYLNLRSSDTWVAEYRKWMDKVG 401
+LYLNLRS DTWV EYR+W+DKVG
Sbjct: 120 DLYLNLRSCDTWVTEYRRWLDKVG 143
>gi|412985453|emb|CCO18899.1| cell death suppressor protein Lls1-like [Bathycoccus prasinos]
Length = 598
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 158/488 (32%), Positives = 220/488 (45%), Gaps = 83/488 (17%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-------DGNGELRCYQDRCPHRLA 129
+DW +WYP+ D+ DDAP T+ +V +K D E C D CPHRLA
Sbjct: 107 FDWHSQWYPIAFECDLEDDAPYAFTLLGTPLVFWKNKKSGASDDAPEYSCVADMCPHRLA 166
Query: 130 KLSEGQLID-GRLECLYHGWQFEGE-GKCVKIPQLPADA-------KIPRSACVRTYEVK 180
LSEG++ D G +EC YHGW FEG+ GKC IPQL ++ PR AC Y K
Sbjct: 167 PLSEGRINDKGEIECGYHGWTFEGKSGKCTSIPQLGSEGPAVDTALNSPR-ACATPYYTK 225
Query: 181 ESQGVVWVWMSQ----KTPPNPDKLPWFENFARPG--FQDVSTIHELPYDHSILLENLMD 234
+QGV+W + ++ KT + LP P +QDV +LP D+S LLEN+MD
Sbjct: 226 VAQGVLWCYPTKIDGTKTVDDLPPLPLIPELDDPMCVYQDV--FRDLPMDYSTLLENVMD 283
Query: 235 PAHIPISHDRTDWTAKREDAQPLGFEVTERTDR----GFAGRW--GKEKDEPLPNFLRFE 288
+H+P +H + KRE+A P+ E+T + GF G W G K + + F+
Sbjct: 284 VSHVPFTHHNS--VGKRENATPVVLELTTEDKKVSRNGFTGEWKEGPRKGKYGTQYTEFQ 341
Query: 289 APCVLQNNRELVDSKTGEKHYFTGLFLCR--PTGQGKSMLIVRFGATKRSPLAK----LF 342
AP ++++ T FT L + P GK LI RF ++ L + LF
Sbjct: 342 APALMRH--------TLRTDQFTTLTVVYAVPIAPGKCRLIARFPFIFKAALPRKLFGLF 393
Query: 343 PKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNL----RSSDTWVAEYRKWMD 398
PKWY H N + + E D FL Q ++ E Y S+D +V +R W+
Sbjct: 394 PKWYTHTNQNAILEDDQIFLHKQERLIEISRTVKNEKYAKACYMPSSADVYVNAFRNWIV 453
Query: 399 KVGHGMP-YHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFR 457
V +G P + G ST K+P E A L +RY
Sbjct: 454 DVANGGPSWPEGMST----KLPPQEETREA-----------------------LLDRYHA 486
Query: 458 HVIHCKGCSSV---IKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVY 514
H +CK C+ I F + S+VA A+T + A A+ ASAS L Y
Sbjct: 487 HTKNCKSCAQALAKIVIFRKFLRVFSLVALAVTTAFVAACISSSTAWVSASAS-GLKPAY 545
Query: 515 ACSTAIAM 522
C A+
Sbjct: 546 LCGVLSAL 553
>gi|449452682|ref|XP_004144088.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Cucumis sativus]
Length = 546
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 153/546 (28%), Positives = 232/546 (42%), Gaps = 97/546 (17%)
Query: 21 LTPPTTNVIISLNKTPKSR-----KCHAVTDRSSTSTVGDHKVLVGPASAEERRGERQVA 75
LTP ++ + N P+SR T R++ + + R E +
Sbjct: 22 LTPNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCELLRTAMASDVVTSERPEVEEE 81
Query: 76 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLAKLSEG 134
+DW EWYP+ D+ P+G V +V++ D N + + D CPHRLA LSEG
Sbjct: 82 KFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEG 141
Query: 135 QLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKESQGVVWVWM 190
++ GRL+C+YHGW F G G C IPQ P D + ACV Y G++W W
Sbjct: 142 RIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQNGILWFW- 200
Query: 191 SQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPI 240
PN D + P+ P + + ++ Y + IL+ENLMDPAH+P
Sbjct: 201 -----PNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAHVPY 255
Query: 241 SHDRT----DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVL--- 293
+H + TA RE +PL V + GF GR + + +F APCV
Sbjct: 256 AHYKIIPAPPATADREGGRPLELVVEKLKADGFVGRHERLRH-------KFFAPCVYYFF 308
Query: 294 -------------QNNRELVDS-------KTGEKHYFTGLFLCRPTGQGKSMLIVRFGAT 333
N E V S + ++ F +F C P GKS LI F
Sbjct: 309 TDPELVQGNVESSTKNDEAVSSTANKPPTEISQRRSFL-VFFCIPVSPGKSRLIWAFPRN 367
Query: 334 KRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT---KELYLNLRSSDTWV 390
+ + P+W FH + + + DM FL + E +E P+ K Y+ ++ SD +V
Sbjct: 368 FGKWMNYIVPRWMFHIGQNLILDSDMYFLRVE-EHKYEEIGPSNWHKACYVPVK-SDAFV 425
Query: 391 AEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPN 450
+R+W++K G G + SLP +P +
Sbjct: 426 VGFRRWLNKYAGGRVDWGGKYSGSLPPIPPREQ--------------------------- 458
Query: 451 LANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVA-AALTVLAILASG---RQWKAFCLASA 506
+ RY+ HV++CK C+ KA + + SL ++ AA+ LA++ G +A + A
Sbjct: 459 VFERYWSHVVNCKSCNGAYKALNIAEVSLQAISMAAIGALALIKHGVLSATVRATIVTVA 518
Query: 507 SLCLAG 512
LC A
Sbjct: 519 ILCFAA 524
>gi|434388645|ref|YP_007099256.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428019635|gb|AFY95729.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 462
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/471 (29%), Positives = 216/471 (45%), Gaps = 61/471 (12%)
Query: 64 SAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-ELRCYQD 122
+A G +D E WYP++ +D+ P T+ D+ +V++ D + R + D
Sbjct: 7 AARTTAGGDDPTKFDPIESWYPVFYIEDLDKLTPTPFTLLDRDLVIWWDTQASQWRAFDD 66
Query: 123 RCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAK--IPRSACVRTYEV 179
RCPHRLA+LSEG++ DG LEC YHGW F G G C +IPQ DAK R ACV++
Sbjct: 67 RCPHRLARLSEGRIAEDGLLECPYHGWAFTGNGTCDRIPQQLPDAKAETSRRACVKSLPT 126
Query: 180 KESQGVVWVWM-----SQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMD 234
QG+++++ +++TP +P + G+ ++T +LPYD LLEN++D
Sbjct: 127 AVEQGLLFIYAGTPARAEQTPIPLIPVPMVDGKPTDGWLVLNTFRDLPYDALTLLENVLD 186
Query: 235 PAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCV 292
P+H+P +H + KR +A P+ EVT GF G W G K F APC+
Sbjct: 187 PSHLPYTHHGS--VGKRSNASPVELEVTSSDKLGFTGTWADGPRKGTLGRQNTTFIAPCL 244
Query: 293 LQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFH 348
+ + EL + GE + P +G+ + RF S + + F P+WY H
Sbjct: 245 MWH--ELTSKQFGET---ITVVYATPKRKGECRIFARFPFKFASKVPEFFIKATPEWYSH 299
Query: 349 QNASKVFEQDMGFLSSQNEVLMK---ETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMP 405
N + + E D FL Q L + T ++ YL + +D +V EYR+W++ P
Sbjct: 300 INNNAILEDDQIFLHHQERYLEQSGGSTNFSQSFYLPTK-ADAFVFEYRQWLNDY-RAEP 357
Query: 406 YHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGC 465
+ P + + L +RY H HC C
Sbjct: 358 F-------------------------------PGQTFKPPLTTERLLDRYHSHTEHCHSC 386
Query: 466 SSVIKAFSTWKNSLSVVA--AALTVLAILASGRQWKAF-CLASASLCLAGV 513
S+ K T K+++ ++A A ++ + +G + F L S + L G
Sbjct: 387 STAYKNIQTAKSAIVIIALLAWISTTILGLTGSENALFPALISIGIVLGGT 437
>gi|356539354|ref|XP_003538163.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 545
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 229/478 (47%), Gaps = 77/478 (16%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLAKLSEGQ 135
+ W + WYP+ L +D+ P + ++IVL+ D + + + D+CPHRLA LSEG+
Sbjct: 93 FTWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKSISQWVAFDDKCPHRLAPLSEGR 152
Query: 136 LI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVW 189
+ DG+L+C YHGW F+G G CVKIPQ ++ R+ AC + SQG+++VW
Sbjct: 153 IDEDGKLQCSYHGWSFDGCGSCVKIPQASSEGPEARAIGSPKACATRFPTLVSQGLLFVW 212
Query: 190 MSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 244
+ P LP ++F +P F V+ +L Y + L+EN+ DP+HI +H +
Sbjct: 213 PDENGWEKAKASKPPMLP--DDFDKPEFATVNIQRDLFYGYDTLMENVSDPSHIEFAHHK 270
Query: 245 TDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNF-LRFEAPCVLQNNRELVDSK 303
T +R+ A+PL F++ R GF+G +E P +F APC + N E +D+K
Sbjct: 271 V--TGRRDRAKPLPFKMDSRGSWGFSG-----ANEGNPQISAKFVAPCYMMNKIE-IDTK 322
Query: 304 ---TGEKHYFTGLFLCR---PTGQGKSMLIV-----RFGATKRSPLA-KLFPKWYFHQNA 351
G++ + +++C P GK+ IV F + P ++ P+WY H +
Sbjct: 323 LPVVGDQKWV--VWICSFNVPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVPRWYEHWTS 380
Query: 352 SKVFEQDMGFLSSQNEVLMKETVPTKEL---YLNLR----SSDTWVAEYRKWMDKVGHGM 404
+KV++ DM L Q ++ + ET ++ Y N+ +D +V +R W+ + G+G
Sbjct: 381 NKVYDGDMIVLQGQEKIFLSETKEGGDINKQYTNITFTPTQADRFVLAFRNWLRRHGNGQ 440
Query: 405 PYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKG 464
P FG+S S +P+ V + + +R+ +H + C
Sbjct: 441 PEWFGNS--SDQPLPSTV-----------------------LSKRQMLDRFEQHTLKCSS 475
Query: 465 CSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAM 522
C + + F TW+ L + + S Q + + LAG+ S AIA
Sbjct: 476 CKAAYEGFQTWQKVLIGATVVFCATSGIPSDFQLR--------VLLAGLAVVSAAIAF 525
>gi|326487416|dbj|BAJ89692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 517
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 211/478 (44%), Gaps = 69/478 (14%)
Query: 62 PASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCY 120
PAS E+ ER +DW ++WYP +D+ AP G V ++V + D G GE R +
Sbjct: 60 PASGEKE--ER----FDWLDQWYPFSPVEDLDPGAPHGKMVLGIRVVAWYDRGAGEWRVF 113
Query: 121 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSACVRT 176
D CPHRLA LSEG++ D GRL+C+YHGW F+G G C IPQ PA ACV +
Sbjct: 114 DDACPHRLAPLSEGRIDDKGRLQCVYHGWCFDGRGACKFIPQAPALGPPVHTNSKACVPS 173
Query: 177 YEVKESQGVVWVW----MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENL 232
Y ++W + K + P+ P F + ++PY + +L ENL
Sbjct: 174 YPCVVQNKILWFYPRAGAEHKDVLQRKRPPFIPEIDDPSFVTSFLVRDMPYGYDVLAENL 233
Query: 233 MDPAHIPISH-----------DRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPL 281
MDP+H+P +H D +E P+ +V E + GFA G
Sbjct: 234 MDPSHVPYAHKGLLRGLPRLVDPGRVEYDKEGGVPMAVKVEESSVNGFASSQG------- 286
Query: 282 PNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKL 341
P + F APC + S+ + H +F+ P G+S ++ F LAK+
Sbjct: 287 PGYSNFVAPCTYYGSPASKKSEKNKPHIML-VFIIVPVAPGRSRVMWAFPRNFGLWLAKI 345
Query: 342 FPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKWMDK 399
P+W+ H + + + DM L + K + K +Y+ SSD V +R W K
Sbjct: 346 TPRWFDHIGVNAILDSDMYLLHIEERNFAKAGIENWQKSVYVPT-SSDGTVVAFRNWFRK 404
Query: 400 VGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHV 459
+ G + ++ ++PA +P K L +RY+ HV
Sbjct: 405 YCR---FQVGWAAPTVDQLPA----------------TPTKD--------KLMDRYWSHV 437
Query: 460 IHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGR-----QWKAFCLASASLCLAG 512
C CS+ +KA + +L V + A+ L +A G +A +++A LC A
Sbjct: 438 AQCASCSAALKAMKALEVALQVASVAVVGLLAVAKGTLLTSVAQRAAVVSAAVLCFAA 495
>gi|168033321|ref|XP_001769164.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679590|gb|EDQ66036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 141/470 (30%), Positives = 222/470 (47%), Gaps = 74/470 (15%)
Query: 65 AEERRGERQVAD--YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQD 122
EE++ E+ +D + W + WYP+ L +D+ P + +++V++KD GE R + D
Sbjct: 21 GEEQQPEQGQSDDAFVWRDHWYPVSLIEDLDPSVPTPFQLLGRELVVWKDPQGEWRVFLD 80
Query: 123 RCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD-----AKIPRSACVRT 176
+CPHRLA LSEG+L + G L+C YHGW F+G+G C IPQ A AK AC +
Sbjct: 81 KCPHRLAPLSEGRLDESGMLQCSYHGWAFKGDGSCSAIPQAAASGPESKAKFSPRACAVS 140
Query: 177 YEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLEN 231
Y + SQG+++VW +K +P LP F+ P + V+ +L Y + L+EN
Sbjct: 141 YPTQVSQGLLFVWPDEKGWEKAAQASPPMLP--PEFSDPKYSTVTIQRDLYYGYDTLMEN 198
Query: 232 LMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPC 291
+ DP+HI +H + T +R+ A+PL F+V + GFA G D P + F PC
Sbjct: 199 VSDPSHIDFAHHKV--TGRRDRAKPLPFKVHKSGPWGFA---GANNDTPTIS-TGFYPPC 252
Query: 292 VLQNNRELVDSK--TGEKHYFTGLFLCR---PTGQGKSMLIV-------RFGATKRSPLA 339
N EL G++ + + +C P GK+ IV +F T
Sbjct: 253 YYYNKIELPVKLPILGDQKW--EILICSFNIPMAPGKTRSIVCSARNFFQF-LTPGDKWW 309
Query: 340 KLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNL----RSSDTWVAEYRK 395
+L P+WY H ++KV++ DM L Q ++ + Y L +D +V +R
Sbjct: 310 QLVPRWYEHWTSNKVYDGDMIVLQGQEKIFLAHDGDINAQYGKLTFTPTQADRFVLAFRN 369
Query: 396 WMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRY 455
W+ + G G P F + P +P+ V + + +RY
Sbjct: 370 WLRRHGKGGPEWFPEARTDRP-LPSTV-----------------------LSKRQMLDRY 405
Query: 456 FRHVIHCKGCSSVIKAFSTWK----NSLSVVAAA------LTVLAILASG 495
+H ++C C + K F W+ S V+AAA + + A+LASG
Sbjct: 406 EQHTLNCSSCRNAQKYFQLWQKIFWGSTIVLAAAAGVPADMVIRALLASG 455
>gi|351726806|ref|NP_001236883.1| lethal leaf spot 1-like protein [Glycine max]
gi|76162840|gb|ABA40832.1| lethal leaf spot 1-like protein [Glycine max]
Length = 563
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 230/484 (47%), Gaps = 77/484 (15%)
Query: 71 ERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLA 129
E + + W + WYP+ L +D+ P + ++IVL+ D + + + D+CPHRLA
Sbjct: 105 ESSYSKFTWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKSISQWVAFDDKCPHRLA 164
Query: 130 KLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQ 183
LSEG++ DG+L+C YHGW F+G G CVKIPQ ++ R+ AC + SQ
Sbjct: 165 PLSEGRIDEDGKLQCSYHGWSFDGCGSCVKIPQAASEGPEARAIGSPKACATRFPTMVSQ 224
Query: 184 GVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHI 238
G+++VW + P LP ++F +P F V+ +L Y + L+EN+ DP+HI
Sbjct: 225 GLLFVWPDENGWEKAKASKPPMLP--DDFDKPEFATVNIQRDLFYGYDTLMENVSDPSHI 282
Query: 239 PISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNF-LRFEAPCVLQNNR 297
+H + T +R+ A+PL F++ R GF+G +E P +F APC + N
Sbjct: 283 EFAHHKV--TGRRDRAKPLPFKMDSRGSWGFSG-----ANEGNPQISAKFVAPCYMMNKI 335
Query: 298 ELVDSK---TGEKHYFTGLFLCR---PTGQGKSMLIV-----RFGATKRSPLA-KLFPKW 345
+ +D+K G++ + +++C P GK+ IV F + P ++ P+W
Sbjct: 336 Q-IDTKLPVVGDQKWV--VWICSFNVPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVPRW 392
Query: 346 YFHQNASKVFEQDMGFLSSQNEVLMKETVPTKEL---YLNLR----SSDTWVAEYRKWMD 398
Y H ++KV++ DM L Q ++ + ET ++ Y N+ +D +V +R W+
Sbjct: 393 YEHWTSNKVYDGDMIVLQGQEKIFLSETKEGGDINKQYTNITFTPTQADRFVLAFRNWLR 452
Query: 399 KVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRH 458
+ G+G P FG+S S +P+ V + + +R+ +H
Sbjct: 453 RHGNGQPEWFGNS--SDQPLPSTV-----------------------LSKRQMLDRFEQH 487
Query: 459 VIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACST 518
+ C C + + F TW+ L + + S Q + + LAG+ S
Sbjct: 488 TLKCSSCKAAYEGFQTWQKVLIGTTVVFCATSGIPSDVQLR--------VLLAGLAIVSA 539
Query: 519 AIAM 522
AI
Sbjct: 540 AITF 543
>gi|168000935|ref|XP_001753171.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695870|gb|EDQ82212.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 475
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 132/446 (29%), Positives = 204/446 (45%), Gaps = 57/446 (12%)
Query: 62 PASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCY 120
P + E +R + A ++W +WYP+ + +D+ ++P T+ + + ++ D + + Y
Sbjct: 5 PEAPEVQRSSEESA-FNWNTQWYPVAVERDLDKNSPHPATILGRPLAIWWDKSTSKWQVY 63
Query: 121 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGE-GKCVKIPQLPADAKI---PRSACVR 175
D+CPHRLA LSEG + + G L C YHGW F+G+ G+C IPQ P D K + ACV
Sbjct: 64 DDQCPHRLAPLSEGSISEEGHLRCSYHGWTFKGDSGECTGIPQAPKDGKQRHRSKRACVS 123
Query: 176 TYEVKESQGVVWVWMSQKTPP-------NPDKLPWFENFARPGFQDVSTIHELPYDHSIL 228
Y E QG++W W P NP P F + P F ++ +L Y + L
Sbjct: 124 VYPSMEQQGILWFWSDLSQGPVNIEAAANPP--PVFSELSDPDFGYDISLRDLEYSYETL 181
Query: 229 LENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTER-TDRGFAGRWGKEKDEPLPNFLRF 287
+ENLMDPAH+ +H + R+ A+PL F +T + GF G K + +P
Sbjct: 182 IENLMDPAHVNFAHHKIQ--GNRKSAEPLNFTITTKIAPSGFKGEDEKSVETFIPPVSFL 239
Query: 288 EAPCVLQNNRELV--------DSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLA 339
+ NN++ + + K + + LFLC P GKS LI F + L
Sbjct: 240 LQFTLGGNNKQHIPVSHALNSEKKATKPKKVSLLFLCIPVSPGKSRLIWSFPRNFATFLF 299
Query: 340 KLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKWM 397
K+ P W H + V + DM L L E K Y+ ++D +VA +R+W+
Sbjct: 300 KITPPWVLHMTNNLVLDSDMYLLHLLERRLQVEGPENWFKRAYIP-TTADAYVAGFRRWL 358
Query: 398 DKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFR 457
+ G P G +LP SP K I +R+ +
Sbjct: 359 NDFAGGCPDWSGRFEDNLP-------------------PSPPKRII--------LDRFNQ 391
Query: 458 HVIHCKGCSSVIKAFSTWKNSLSVVA 483
HV+ CK CS+ +K F + L ++A
Sbjct: 392 HVVKCKSCSNALKNFKALEVGLQILA 417
>gi|41469406|gb|AAS07229.1| putative iron-sulfur cluster-binding protein [Oryza sativa Japonica
Group]
Length = 538
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 146/502 (29%), Positives = 216/502 (43%), Gaps = 84/502 (16%)
Query: 63 ASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD--------GN 114
AS +E R +DW ++WYP+ D+ AP G TV +IV + D G
Sbjct: 69 ASGKEER-------FDWLDQWYPVAPVCDLDPGAPHGKTVLGLRIVAWFDRTTAAADGGG 121
Query: 115 GELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPR 170
GE R + D CPHRLA LSEG++ D GRL+C+YHGW F+G G C IPQ PA
Sbjct: 122 GEWRVFDDSCPHRLAPLSEGRVDDKGRLQCVYHGWCFDGRGACQFIPQAPALGPAVHKNS 181
Query: 171 SACVRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDH 225
ACV +Y ++W + + P + L P+ P F V + +LPY +
Sbjct: 182 KACVASYPCVVQNNILWFY-PRSEPEYKEILQRKRPPYIPQIDDPSFVTVYGVRDLPYGY 240
Query: 226 SILLENLMDPAHIPISHDRTDWTAKRED----------AQPLGFEVTERTDRGFAGRWGK 275
+L+ENLMDPAH+P +H T K+ED PL E+ E GF +
Sbjct: 241 DVLVENLMDPAHVPYAHKGLMRTRKKEDPGRVEFDKEGGGPLKMEIEETNVEGFLSMLDR 300
Query: 276 EKDEPLPNFLRFEAPCV-----LQNNRELVDSKTGEKHYFTGL--FLCRPTGQGKSMLIV 328
F +F APC LQ + K +K T + FLC P G+S L+
Sbjct: 301 -------GFFKFVAPCTFYGSPLQTPSQDDQGKEKKKKQPTVMLVFLCIPVSPGRSRLVW 353
Query: 329 RFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFL--SSQNEVLMKETVPTKELYLNLRSS 386
F + K+ P+WY+H + + + D+ L +N + K Y+ SS
Sbjct: 354 AFPRNVGVWMDKIIPRWYYHIGQNAILDSDIYLLHIEERNFATVGLDNWQKACYVPT-SS 412
Query: 387 DTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTM 446
D + +R W K + G +T ++P +P+K
Sbjct: 413 DNMIITFRNWFRKYCK---HQIGWATPITNQLP----------------PTPSKD----- 448
Query: 447 HAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGR-----QWKAF 501
L +RY+ HV+ C CS +K + +L V + A+ +A G ++
Sbjct: 449 ---QLLDRYWSHVMQCTSCSGALKKMKALEVALQVASVAVVGFLAVAKGTVVTSVVQRSA 505
Query: 502 CLASASLCLAGVYACSTAIAMN 523
+A+A LC A + I N
Sbjct: 506 VVAAAVLCFAASRWLANFIEKN 527
>gi|302794127|ref|XP_002978828.1| hypothetical protein SELMODRAFT_177205 [Selaginella moellendorffii]
gi|300153637|gb|EFJ20275.1| hypothetical protein SELMODRAFT_177205 [Selaginella moellendorffii]
Length = 547
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 227/500 (45%), Gaps = 75/500 (15%)
Query: 48 SSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQI 107
SS++ D + + + E + +++ + WTE WYP+ L +D+ A + ++I
Sbjct: 61 SSSTVKEDEQQFLQQSLGESQ--DKEDKKFSWTEHWYPVSLVEDLDPKAATPFKLLGREI 118
Query: 108 VLYKDGNGELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA 166
V++KDG G R + D+CPHRLA LSEG++ + G L+C YHGW F+G+G C KIPQ A
Sbjct: 119 VVWKDGEGNWRAFSDQCPHRLAPLSEGRIDENGWLQCSYHGWSFKGDGSCGKIPQ--AAT 176
Query: 167 KIPRS-------ACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQD 214
+ P S AC T+ SQG+++VW +K P +LP F P F
Sbjct: 177 QGPESKAVASPRACAITFPAVVSQGLLFVWPDEKGWESAQRTQPPQLP--AVFDDPSFST 234
Query: 215 VSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWG 274
V+ +L Y + L+EN+ DP+HI +H + T KR+ A+PL F+V R GF+ G
Sbjct: 235 VTIQRDLFYGYDTLMENVSDPSHIDFAHHKV--TGKRDRAKPLTFKVDSRGPWGFS---G 289
Query: 275 KEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCR---PTGQGKSMLIV--- 328
D P F APC N E+ + + +++C P G++ IV
Sbjct: 290 ANSDTPKIT-AEFLAPCYYINKIEIPLTLPLQGPKTWEIWICSFNVPMAPGQTRSIVCSA 348
Query: 329 ------------RFGATKRSPL-AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVP 375
+ A+ S L L P+W+ H ++KV++ DM L Q + +
Sbjct: 349 RNFFTFLMPGPAWWQASSASFLYLSLVPRWHEHWTSNKVYDGDMIVLQGQEKKFLATGGD 408
Query: 376 TKELYLNL----RSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVA 431
Y + +D +V E+R W+ K G+G P A
Sbjct: 409 INAKYSQITFTPTQADRFVLEFRNWLRKHGNGEP----------------------KWAA 446
Query: 432 GVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAI 491
G S + P + + + +RY +H ++C C + KAF K + V+ A V A+
Sbjct: 447 GTSKTQPLPSTV--LSKQQMLDRYQQHTLNCSSCRNAFKAF---KVAGRVLIGATVVFAV 501
Query: 492 LASGRQWKAFCLASASLCLA 511
Q L A L +A
Sbjct: 502 ATGIPQEIILKLIFAGLAMA 521
>gi|449493544|ref|XP_004159341.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Cucumis sativus]
Length = 547
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 151/547 (27%), Positives = 229/547 (41%), Gaps = 98/547 (17%)
Query: 21 LTPPTTNVIISLNKTPKSR-----KCHAVTDRSSTSTVGDHKVLVGPASAEERRGERQVA 75
LTP ++ + N P+SR T R++ + + R E +
Sbjct: 22 LTPNPYSLASNRNPLPRSRSRSFSNFKTPTHRNAIRKCELLRTAMASDVVTSERPEVEEE 81
Query: 76 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLAKLSEG 134
+DW EWYP+ D+ P+G V +V++ D N + + D CPHRLA LSEG
Sbjct: 82 KFDWFAEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFDDSCPHRLAPLSEG 141
Query: 135 QLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKESQGVVWVWM 190
++ GRL+C+YHGW F G G C IPQ P D + ACV Y G++W W
Sbjct: 142 RIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACVAIYPTTVQNGILWFW- 200
Query: 191 SQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPI 240
PN D + P+ P + + ++ Y + IL+ENLMDPAH+P
Sbjct: 201 -----PNSDPKFKDIILEKEPPFIPELDDPSYVKLEGNRDMAYGYEILIENLMDPAHVPY 255
Query: 241 SHDRT-----DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVL-- 293
+H + RE +PL V + GF GR + + +F APCV
Sbjct: 256 AHYKIIPAPPSIKTDREGGRPLELVVEKLKADGFVGRHERLRH-------KFFAPCVYYF 308
Query: 294 --------------QNNRELVDS-------KTGEKHYFTGLFLCRPTGQGKSMLIVRFGA 332
N E V S + ++ F +F C P GKS LI F
Sbjct: 309 FTDPELVQGNVESSTKNDEAVSSTANKPPTEISQRRSFL-VFFCIPVSPGKSRLIWAFPR 367
Query: 333 TKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT---KELYLNLRSSDTW 389
+ + P+W FH + + + DM FL + E +E P+ K Y+ ++ SD
Sbjct: 368 NFGKWMNYIVPRWMFHIGQNLILDSDMYFLRVE-EHKYEEIGPSNWHKACYVPVK-SDAL 425
Query: 390 VAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAP 449
V +R+W++K G G + SLP +P +
Sbjct: 426 VVGFRRWLNKYAGGRVDWGGKYSGSLPPIPPREQ-------------------------- 459
Query: 450 NLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVA-AALTVLAILASG---RQWKAFCLAS 505
+ RY+ HV++CK C+ KA + + SL ++ AA+ LA++ G +A +
Sbjct: 460 -VFERYWSHVVNCKSCNGAYKALNIAEVSLQAISMAAIGALALIKHGVLSATVRATIVTV 518
Query: 506 ASLCLAG 512
A LC A
Sbjct: 519 AILCFAA 525
>gi|302787751|ref|XP_002975645.1| hypothetical protein SELMODRAFT_174928 [Selaginella moellendorffii]
gi|300156646|gb|EFJ23274.1| hypothetical protein SELMODRAFT_174928 [Selaginella moellendorffii]
Length = 547
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 144/500 (28%), Positives = 227/500 (45%), Gaps = 75/500 (15%)
Query: 48 SSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQI 107
SS++ D + + + E + +++ + WTE WYP+ L +D+ A + ++I
Sbjct: 61 SSSTVKEDEQQFLQQSLGESQ--DKEDKKFSWTEHWYPVSLVEDLDPKAATPFKLLGREI 118
Query: 108 VLYKDGNGELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA 166
V++KDG G R + D+CPHRLA LSEG++ + G L+C YHGW F+G+G C KIPQ A
Sbjct: 119 VVWKDGEGNWRAFSDQCPHRLAPLSEGRIDENGWLQCSYHGWSFKGDGSCGKIPQ--AAT 176
Query: 167 KIPRS-------ACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQD 214
+ P S AC ++ SQG+++VW +K P +LP F P F
Sbjct: 177 QGPESKAVASPRACAISFPAVVSQGLLFVWPDEKGWESAQRTQPPQLP--AVFDDPSFST 234
Query: 215 VSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWG 274
V+ +L Y + L+EN+ DP+HI +H + T KR+ A+PL F+V R GF+ G
Sbjct: 235 VTIQRDLFYGYDTLMENVSDPSHIDFAHHKV--TGKRDRAKPLTFKVDSRGPWGFS---G 289
Query: 275 KEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCR---PTGQGKSMLIV--- 328
D P F APC N E+ + + +++C P G++ IV
Sbjct: 290 ANSDTPKIT-AEFLAPCYYINKIEIPVTLPLQGPKTWEIWICSFNVPMAPGQTRSIVCSA 348
Query: 329 ------------RFGATKRSPL-AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVP 375
+ A+ S L L P+W+ H ++KV++ DM L Q + +
Sbjct: 349 RNFFTFLMPGPAWWQASSASFLYLSLVPRWHEHWTSNKVYDGDMIVLQGQEKKFLATGGD 408
Query: 376 TKELYLNL----RSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVA 431
Y + +D +V E+R W+ K G+G P A
Sbjct: 409 INAKYSQITFTPTQADRFVLEFRNWLRKHGNGEP----------------------KWAA 446
Query: 432 GVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAI 491
G S + P + + + +RY +H ++C C + KAF K + V+ A V A+
Sbjct: 447 GTSKTQPLPSTV--LSKQQMLDRYQQHTLNCSSCRNAFKAF---KVAGRVLIGATVVFAV 501
Query: 492 LASGRQWKAFCLASASLCLA 511
Q L A L +A
Sbjct: 502 ATGIPQEIILKLIFAGLAMA 521
>gi|414873470|tpg|DAA52027.1| TPA: putative pheophorbide a oxygenase [Zea mays]
Length = 525
Score = 184 bits (468), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 134/492 (27%), Positives = 210/492 (42%), Gaps = 68/492 (13%)
Query: 62 PASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCY 120
P + E++ +DW ++WYPL D+ AP G TV +V + D G GE R +
Sbjct: 61 PRTEEQQPSPSGEERFDWLDQWYPLAPVCDLDPRAPHGKTVLGLSVVAWYDRGAGEWRVF 120
Query: 121 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSACVRT 176
D CPHRLA LSEG++ D GRL+C+YHGW F+G G C IPQ PA ACV +
Sbjct: 121 DDACPHRLAPLSEGRIDDRGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSSRACVAS 180
Query: 177 YEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSILLEN 231
Y ++W + + P + D L P P F V I +LPY + IL+EN
Sbjct: 181 YPCVVQNNILWFY-PRADPEHSDVLQRKRPPLIPEIDDPDFVTVYGIRDLPYGYDILVEN 239
Query: 232 LMDPAHIPISHD-------------RTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKD 278
LMDPAH+P +H R D+ +E P+ ++ + GF +E+
Sbjct: 240 LMDPAHVPYAHKGIMRGIRKKEDPGRVDY--DKEGGGPVKMKIEQANIEGFVS--PQER- 294
Query: 279 EPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPL 338
+ +F APC + + + + +F C P G G+S +I F L
Sbjct: 295 ----GYFQFVAPCTFFGTPFVQEGQKKKAPRVMLVFFCIPVGPGRSRVIWAFPRNVGVWL 350
Query: 339 AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKW 396
+ P+W +H + + + D+ L + + + Y+ SSD V +R W
Sbjct: 351 HHITPRWLYHVGQNLILDSDIFLLHVEERKFAAAGLDNWQRACYVPT-SSDAMVVAFRNW 409
Query: 397 MDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYF 456
K G +T+ + ++P T L RY+
Sbjct: 410 FRKFCKN---QVGWATLQVDQLPP------------------------TRTKDQLMERYW 442
Query: 457 RHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQW-----KAFCLASASLCLA 511
HV+ C+ C++ +KA + +L V + A+ +A G +A +++ LC A
Sbjct: 443 SHVVQCRSCNAALKAMKALEAALQVASVAVVGFLAVAKGTVLTSTVQRAAVVSATVLCFA 502
Query: 512 GVYACSTAIAMN 523
+ I N
Sbjct: 503 ASRWLANFIQKN 514
>gi|116787254|gb|ABK24432.1| unknown [Picea sitchensis]
Length = 544
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 144/492 (29%), Positives = 228/492 (46%), Gaps = 73/492 (14%)
Query: 58 VLVGPASAEE----RRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG 113
V+ G +SAEE R E + + W + WYP+ L +D+ P + + IVL++D
Sbjct: 68 VIPGSSSAEEYDKGREAEEESGKFLWRDHWYPVSLIEDLDPKIPTPFQLLGRDIVLWQDA 127
Query: 114 NGELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS- 171
G + ++D+CPHRLA LSEG+L + G L+C YHGW F+ +G C +IPQ ++ R+
Sbjct: 128 EGNWKAFEDKCPHRLAPLSEGRLDENGWLQCSYHGWSFKADGSCARIPQAASEGPEARAV 187
Query: 172 ----ACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELP 222
AC ++ SQG+++VW +K + P LP + F+ P F V+ +L
Sbjct: 188 GSPRACAVSFPTTVSQGLLFVWPDEKGWERASKFKPPLLP--DEFSDPRFSTVTIQRDLF 245
Query: 223 YDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLP 282
Y + L+EN+ DP+HI +H + T +R+ A+PL F+V GF+G E
Sbjct: 246 YGYDTLMENVSDPSHIDFAHHKV--TGRRDRAKPLTFKVDSSGPWGFSG----SNSETPK 299
Query: 283 NFLRFEAPCVLQNNRELVDS--KTGEKHYFTGLFLCR---PTGQGKSMLIV-----RFGA 332
F APC N EL GE+ + +++C P GK+ IV F
Sbjct: 300 ISASFIAPCYYINKIELPVKLPLLGEQTW--EIWICSFNTPMLPGKTRSIVCSARNFFRF 357
Query: 333 TKRSPL-AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSS----- 386
T P +L P+W+ H ++KV++ DM L Q + + T T + +N S
Sbjct: 358 TMPGPAWWQLVPRWHEHWTSNKVYDGDMIVLQGQEKTFLANTS-TGDFDVNRDYSTLTFT 416
Query: 387 ----DTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGA 442
D +V +R W+ + G+G P G +T P +P+ V
Sbjct: 417 PTQADRFVLAFRNWLRRYGNGQPEWLGPNTSGQP-LPSTV-------------------- 455
Query: 443 IGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKA-F 501
+ + +RY +H + C C ++F + L + A L A + K
Sbjct: 456 ---LSKREMLDRYEQHTLKCSSCKKAHQSFQQLQKFL--LGATLVFAASAGIPPEMKLRI 510
Query: 502 CLASASLCLAGV 513
LASA++ AGV
Sbjct: 511 ILASAAVVTAGV 522
>gi|414873471|tpg|DAA52028.1| TPA: putative pheophorbide a oxygenase [Zea mays]
Length = 523
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/492 (27%), Positives = 210/492 (42%), Gaps = 70/492 (14%)
Query: 62 PASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCY 120
P + E++ +DW ++WYPL D+ AP G TV +V + D G GE R +
Sbjct: 61 PRTEEQQPSPSGEERFDWLDQWYPLAPVCDLDPRAPHGKTVLGLSVVAWYDRGAGEWRVF 120
Query: 121 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSACVRT 176
D CPHRLA LSEG++ D GRL+C+YHGW F+G G C IPQ PA ACV +
Sbjct: 121 DDACPHRLAPLSEGRIDDRGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSSRACVAS 180
Query: 177 YEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSILLEN 231
Y ++W + + P + D L P P F V I +LPY + IL+EN
Sbjct: 181 YPCVVQNNILWFY-PRADPEHSDVLQRKRPPLIPEIDDPDFVTVYGIRDLPYGYDILVEN 239
Query: 232 LMDPAHIPISHD-------------RTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKD 278
LMDPAH+P +H R D+ +E P+ ++ + GF +E+
Sbjct: 240 LMDPAHVPYAHKGIMRGIRKKEDPGRVDY--DKEGGGPVKMKIEQANIEGFVS--PQER- 294
Query: 279 EPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPL 338
+ +F APC + + K + +F C P G G+S +I F L
Sbjct: 295 ----GYFQFVAPCTFFGTPFVQEKKKAPRVML--VFFCIPVGPGRSRVIWAFPRNVGVWL 348
Query: 339 AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKW 396
+ P+W +H + + + D+ L + + + Y+ SSD V +R W
Sbjct: 349 HHITPRWLYHVGQNLILDSDIFLLHVEERKFAAAGLDNWQRACYVPT-SSDAMVVAFRNW 407
Query: 397 MDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYF 456
K G +T+ + ++P T L RY+
Sbjct: 408 FRKFCKN---QVGWATLQVDQLPP------------------------TRTKDQLMERYW 440
Query: 457 RHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQW-----KAFCLASASLCLA 511
HV+ C+ C++ +KA + +L V + A+ +A G +A +++ LC A
Sbjct: 441 SHVVQCRSCNAALKAMKALEAALQVASVAVVGFLAVAKGTVLTSTVQRAAVVSATVLCFA 500
Query: 512 GVYACSTAIAMN 523
+ I N
Sbjct: 501 ASRWLANFIQKN 512
>gi|224286860|gb|ACN41133.1| unknown [Picea sitchensis]
Length = 544
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 144/496 (29%), Positives = 228/496 (45%), Gaps = 81/496 (16%)
Query: 58 VLVGPASAEE----RRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG 113
V+ G +SAEE R E + + W + WYP+ L +D+ P + + IVL++D
Sbjct: 68 VIPGSSSAEEYDKGREAEEESGKFLWRDHWYPVSLIEDLDPKIPTPFQLLGRDIVLWQDA 127
Query: 114 NGELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS- 171
G + ++D+CPHRLA LSEG+L + G L+C YHGW F+ +G C +IPQ ++ R+
Sbjct: 128 EGNWKAFEDKCPHRLAPLSEGRLDENGWLQCSYHGWSFKADGSCARIPQAASEGPEARAV 187
Query: 172 ----ACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELP 222
AC ++ SQG+++VW +K + P LP + F+ P F V+ +L
Sbjct: 188 GSPRACAVSFPTTVSQGLLFVWPDEKGWERASKFKPPLLP--DEFSDPRFSTVTIQRDLF 245
Query: 223 YDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLP 282
Y + L+EN+ DP+HI +H + T +R+ A+PL F+V GF+G E
Sbjct: 246 YGYDTLMENVSDPSHIDFAHHKV--TGRRDRAKPLTFKVDSSGPWGFSG----SNSETPK 299
Query: 283 NFLRFEAPCVLQNNRE------LVDSKTGEKHYFTGLFLCR---PTGQGKSMLIV----- 328
F APC N E L+ +T E +++C P GK+ IV
Sbjct: 300 ISASFIAPCYYINKIEIPVKLPLLGEQTWE------IWICSFNTPMLPGKTRSIVCSARN 353
Query: 329 RFGATKRSPL-AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSS- 386
F T P +L P+W+ H ++KV++ DM L Q + + T T + +N S
Sbjct: 354 FFRFTMPGPAWWQLVPRWHEHWTSNKVYDGDMIVLQGQEKTFLANTS-TGDFDVNRDYST 412
Query: 387 --------DTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSP 438
D +V +R W+ + G+G P G +T P +P+ V
Sbjct: 413 LTFTPTQADRFVLAFRNWLRRYGNGQPEWLGPNTSGQP-LPSTV---------------- 455
Query: 439 AKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQW 498
+ + +RY +H + C C ++F + L + A L A +
Sbjct: 456 -------LSKREMLDRYEQHTLKCSSCKKAHQSFQQLQKFL--LGATLVFAASAGIPPEM 506
Query: 499 KA-FCLASASLCLAGV 513
K LASA++ AGV
Sbjct: 507 KLRIILASAAVVTAGV 522
>gi|303278118|ref|XP_003058352.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
gi|226459512|gb|EEH56807.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
Length = 573
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 136/449 (30%), Positives = 201/449 (44%), Gaps = 80/449 (17%)
Query: 64 SAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD---------GN 114
+ E+ GE + YDW +WYP+ D+ DDAP T+ + +V +KD G
Sbjct: 85 ATEDAAGEP--SSYDWHNQWYPVAFVADLVDDAPFTFTLLGEPLVFWKDKTTTTNSASGG 142
Query: 115 GELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEG-EGKCVKIPQLPADAKI---- 168
G RC D+CPHRL LSEG++ D G +EC YHGW F+G GKC IPQLPA
Sbjct: 143 GTYRCTADKCPHRLVPLSEGRVNDAGEIECGYHGWTFDGASGKCTSIPQLPATGNAIDTA 202
Query: 169 ---PRSACVRTYEVKESQGVVWVW---MSQKTPPNPDKLPWFENFARPG-----FQDVST 217
PRS CV Y +QG+++V + P + +P PG QD+S
Sbjct: 203 LASPRS-CVTPYPTAVAQGMLFVLPVSALKSDPASRPPVPVIPEIDDPGASHCVVQDIS- 260
Query: 218 IHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV-TERTDRGFAGRW--G 274
+LP D++ LLEN+MD +H+P +H + +RE+A P+ E+ TE D GF G W G
Sbjct: 261 -RDLPMDYATLLENVMDISHVPFTHHGS--VGRRENATPVVAELTTELADGGFEGIWKEG 317
Query: 275 KEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCR--PTGQGKSMLIVRFGA 332
+ + F+AP ++++ T FT L + PT G+ L+ RF
Sbjct: 318 PRNGKYGSQYTHFQAPALMRH--------TLRTDQFTTLTVVYAVPTTPGRCRLMARFPF 369
Query: 333 T-KRSP---LAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNL----R 384
K +P KL P+W+ H N + + E D FL Q ++ E + Y
Sbjct: 370 IFKAAPPRFFFKLVPRWWSHLNQNSILEDDQIFLHKQERLIEIEKNVRGKAYAQACYMPS 429
Query: 385 SSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIG 444
+DT+V +R+W+ G P +LP E
Sbjct: 430 QADTYVGAFRRWIVDNAGGSPAWPKGMKDALPPQLTTKEQ-------------------- 469
Query: 445 TMHAPNLANRYFRHVIHCKGCSSVIKAFS 473
+ +R+ H HCK C+ + +
Sbjct: 470 ------ILDRFHSHTEHCKSCAVALSNLT 492
>gi|357472079|ref|XP_003606324.1| Pheophorbide A oxygenase [Medicago truncatula]
gi|355507379|gb|AES88521.1| Pheophorbide A oxygenase [Medicago truncatula]
Length = 542
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/452 (28%), Positives = 216/452 (47%), Gaps = 67/452 (14%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQDRCPHRLAKLSEGQ 135
+ W + WYP+ L +D+ P + ++IV++ D N + + D+CPHRLA LSEG+
Sbjct: 90 FSWRDHWYPVSLIEDLDSSLPTPFQLLGREIVIWFDKANSQWVAFDDKCPHRLAPLSEGR 149
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVW 189
+ + G L+C YHGW F+G G C IPQ + R+ AC + SQG+++VW
Sbjct: 150 IDESGNLQCSYHGWSFDGRGGCTVIPQASPEGPEARAVGSPRACATRFPTLVSQGLLFVW 209
Query: 190 MSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 244
+ P LP ++F +P F V+ +L Y + L+EN+ DP+HI +H +
Sbjct: 210 PDENGWEKANASKPPMLP--DDFVKPEFATVNIQRDLFYGYDTLMENVSDPSHIDFAHHK 267
Query: 245 TDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSK- 303
T +R+ A+PL F++ R GF+G E + + + +F APC N E +D+K
Sbjct: 268 V--TGRRDRAKPLPFKMDSRGSWGFSG--ANEGNPRISS--KFIAPCYYINKVE-IDTKL 320
Query: 304 --TGEKHYFTGLFLCR---PTGQGKSMLIV-----RFGATKRSPL-AKLFPKWYFHQNAS 352
G++ + +++C P GK+ IV F T P ++ P+WY H ++
Sbjct: 321 PVVGDQKWV--IWICSFNVPMAPGKTRSIVCSARNFFQLTVPGPAWWQVVPRWYEHWTSN 378
Query: 353 KVFEQDMGFLSSQNEVLMKETVPTKEL---YLNL----RSSDTWVAEYRKWMDKVGHGMP 405
KV++ DM L Q ++ + ET ++ Y +L +D +V +R W+ + G+G P
Sbjct: 379 KVYDGDMIVLQGQEKIFLAETENGGDINKQYTSLTFTPTQADRFVLAFRNWLRRHGNGQP 438
Query: 406 YHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGC 465
FG S+ S P +P+ V + + +R+ +H + C C
Sbjct: 439 EWFGKSS-SQP-LPSTV-----------------------LSKRQMLDRFEQHTLKCSAC 473
Query: 466 SSVIKAFSTWKNSLSVVAAALTVLAILASGRQ 497
+ F TW+ L+ + + S Q
Sbjct: 474 KGAYEGFQTWQKILTGATVVFCATSGIPSDTQ 505
>gi|357114991|ref|XP_003559277.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like
[Brachypodium distachyon]
Length = 482
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 145/502 (28%), Positives = 212/502 (42%), Gaps = 89/502 (17%)
Query: 61 GPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD---GNGEL 117
G A EE R +DW ++WYP+ D+ AP G T+ ++V + D G+GE
Sbjct: 20 GGAEGEEGR-------FDWLDQWYPVAPVCDLDPRAPHGKTILGLRVVAWYDRTAGDGEW 72
Query: 118 RCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSAC 173
R + D CPHRLA LSEG++ D GRL+C+YHGW F+G G C IPQ PA AC
Sbjct: 73 RVFDDACPHRLAPLSEGRIDDKGRLQCVYHGWCFDGRGSCQFIPQAPALGPPVHKNSKAC 132
Query: 174 VRTYEVKESQGVVWVW----------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPY 223
V Y ++W + + +K P P+ P F V I +L Y
Sbjct: 133 VAAYPSVVQNNILWFYPRAGAEHEDVLQRKRP------PFIPEIDDPSFVTVYGIRDLSY 186
Query: 224 DHSILLENLMDPAHIPISH-----------DRTDWTAKREDAQPLGFEVTERTDRGFAGR 272
+ +L+ENLMDPAH+P +H D RE P+ ++ E GF
Sbjct: 187 GYDVLVENLMDPAHVPYAHKGLMGRLRKKEDPGRVEFDREGGGPMKMKIEEAGVDGFL-- 244
Query: 273 WGKEKDEPLPN--FLRFEAPCVLQNNRELVDSKTGEKH--YFTGLFLCRPTGQGKSMLIV 328
P N + R+ APC + L + GEK +F+C P G+S +I
Sbjct: 245 ------SPQENGGYFRYVAPCTFYGS-PLPRQEEGEKKKPRIMLVFMCVPVAPGRSRVIW 297
Query: 329 RFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT--KELYLNLRSS 386
F L K+ P+WY+H + + + D+ L + V K +Y+ SS
Sbjct: 298 AFPRNVGLWLDKIIPRWYYHIGQNAILDSDIYLLHVEERNFAAAGVENWQKAVYVPT-SS 356
Query: 387 DTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTM 446
D+ V +R W K H + V+ PA +P K
Sbjct: 357 DSMVIAFRNWFRK----------HCKSQVGWAAPTVDQLPA---------TPTKD----- 392
Query: 447 HAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFC---- 502
L RY+ HV C CS+ +KA + +L V A A+ +A K+
Sbjct: 393 ---KLMERYWSHVEQCTSCSAALKAMKALEVALQVAAVAIVGFLTVAKETLVKSVAQRVA 449
Query: 503 -LASASLCLAGVYACSTAIAMN 523
+++A LC A ++ I N
Sbjct: 450 VVSAAVLCFAASRWLASFIQKN 471
>gi|428223387|ref|YP_007107557.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
7502]
gi|427996727|gb|AFY75422.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
7502]
Length = 455
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 194/432 (44%), Gaps = 57/432 (13%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRLAKLSE 133
A +D E WYP+ D+ P T+ DQ +VL+ D N + R + D+CPHRLA+LSE
Sbjct: 27 AYFDPKEAWYPVSYITDLERTKPTAFTLLDQDLVLWWDQNNKTWRAFADQCPHRLARLSE 86
Query: 134 GQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWV-- 188
G++ DG +EC YHGW F+G G C +IPQ +S ACV++Y +QG+++V
Sbjct: 87 GRIAEDGLIECPYHGWAFKGNGSCDRIPQKVKGGTAEQSSRACVKSYATATAQGLLFVCL 146
Query: 189 --WMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 246
+ SQ P D L + + ++T +LPYD S LLEN++D +H+P +H +
Sbjct: 147 GEYASQVKVPIIDAL----EQSPEAWVCLNTFRDLPYDASTLLENVLDSSHLPFTHHES- 201
Query: 247 WTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE 306
R +A P+ E+T GF G W + P L + + N D + +
Sbjct: 202 -VGNRANAAPVELELTRSDKSGFTGVWA---EGPRKGTLGTQDTVFIAPNLMWHDLTSKQ 257
Query: 307 KHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGFL 362
+ P +G+ L RF S + + F P+W+ H N + + E D FL
Sbjct: 258 FGVTMTVVYATPMRKGECRLFARFPFQFSSKIPEFFIKLTPQWFSHINQNAILEDDQIFL 317
Query: 363 SSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVV 422
Q L + + Y +D +V EYRKW+ +
Sbjct: 318 HHQERYLELQKTNFAQAYYLPTKADLFVIEYRKWLSQFN--------------------- 356
Query: 423 EHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVV 482
A AG S SPA+ P L +RY H IHC C + +K L +
Sbjct: 357 ----ADPFAGQSL-SPAQP------KPVLLDRYHSHTIHCHSCRTALKNI----QRLKIA 401
Query: 483 AAALTVLAILAS 494
+ L +A+L S
Sbjct: 402 VSGLGAIALLTS 413
>gi|357518865|ref|XP_003629721.1| Pheophorbide a oxygenase [Medicago truncatula]
gi|355523743|gb|AET04197.1| Pheophorbide a oxygenase [Medicago truncatula]
Length = 532
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 194/461 (42%), Gaps = 81/461 (17%)
Query: 66 EERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRC 124
+E E +DW +WYPL D+ AP V +V++ D N + + D C
Sbjct: 44 DEPEVETGSEKFDWYSQWYPLMPICDLDKRAPHAKKVMGIDVVIWWDRNESAWQVFDDAC 103
Query: 125 PHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVK 180
PHRLA LSEG++ GRL+C+YHGW F G G C IPQ P + + ACV Y
Sbjct: 104 PHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPIHTSKKACVAAYPST 163
Query: 181 ESQGVVWVW----------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLE 230
++W W +++KTP P+ P F ++PY + +L+E
Sbjct: 164 VQNDILWFWPNTDPQYKDIITRKTP------PFIPEIDDPSFTSFMGNRDIPYGYEVLVE 217
Query: 231 NLMDPAHIPISH-----DRTDWTAKREDAQPLGFEVTERTDRGFAGR--WGKEKDEPLPN 283
NLMDP+H+P +H D A RE PL F V E GF W K K P
Sbjct: 218 NLMDPSHVPYAHYGLTPDPKGNNADREGGTPLDFSVEELDINGFTANQGWNKSKFMPPSI 277
Query: 284 FLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFP 343
F + P L ++ E S +K F+ +F+C P GKS LI F K+ P
Sbjct: 278 FYLYSEPDKLASSVETKKSSVQKK--FSMIFICIPVSPGKSRLIWCFPRNFGVWADKIVP 335
Query: 344 KWYFHQNASKVFEQDMGFLSSQNEVLMKET---------VPTKELYLNLRSSDTWVAEYR 394
+W H + + + D+ L + + +M VPTK +D V +R
Sbjct: 336 RWILHMGQNLILDSDLYLLHVEEQKIMDVGQGNWHKACFVPTK--------ADALVIGFR 387
Query: 395 KWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANR 454
KW+ K G + +LP P + L +R
Sbjct: 388 KWLKKYAGDQVDWRGKYSGALPPTPPREQ---------------------------LMDR 420
Query: 455 YFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASG 495
Y+ H ++CK C+ K SL+VV L ++++ + G
Sbjct: 421 YWSHTVNCKSCNFAYK-------SLNVVEVMLQIISVASIG 454
>gi|226505578|ref|NP_001147604.1| LOC100281213 [Zea mays]
gi|195612454|gb|ACG28057.1| pheophorbide a oxygenase [Zea mays]
Length = 525
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 133/492 (27%), Positives = 209/492 (42%), Gaps = 68/492 (13%)
Query: 62 PASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCY 120
P + E++ +DW ++WYPL D+ AP G TV +V + D G GE R +
Sbjct: 61 PRTEEQQPSPSGEERFDWLDQWYPLAPVCDLDPRAPHGKTVLGLSVVAWYDRGAGEWRVF 120
Query: 121 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSACVRT 176
D CPHRLA LSEG++ D GRL+C+YHGW F+G G C IPQ PA ACV +
Sbjct: 121 DDACPHRLAPLSEGRIDDRGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSSRACVAS 180
Query: 177 YEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSILLEN 231
Y ++W + + P + D L P P F V I +LPY + IL+EN
Sbjct: 181 YPCVVQNNILWFY-PRADPEHSDVLQRKRPPLIPEIDDPDFVTVYGIRDLPYGYDILVEN 239
Query: 232 LMDPAHIPISHD-------------RTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKD 278
LMDPAH+P +H R D+ +E P+ ++ + GF +E+
Sbjct: 240 LMDPAHVPYAHKGIMRGIRKKEDPGRVDY--DKEGGGPVKMKIEQANIEGFVS--PQER- 294
Query: 279 EPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPL 338
+ +F APC + + + + +F C P G G+S +I F L
Sbjct: 295 ----GYFQFVAPCTFFGTPFVQEGQKKKAPRVMLVFFCIPVGPGRSRVIWAFPRNVGVWL 350
Query: 339 AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKW 396
+ P+W +H + + + D+ L + + + Y+ SSD V +R W
Sbjct: 351 HHITPRWLYHVGQNLILDSDIFLLHVEERKFAAAGLDNWQRACYVPT-SSDAMVVAFRNW 409
Query: 397 MDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYF 456
K G +T+ + ++P T L RY+
Sbjct: 410 FRKFCKN---QVGWATLQVDQLPP------------------------TRTKDQLMERYW 442
Query: 457 RHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQW-----KAFCLASASLCLA 511
V+ C+ C++ +KA + +L V + A+ +A G +A +++ LC A
Sbjct: 443 SXVVQCRSCNAALKAMKALEAALQVASVAVVGFLAVAKGTVLTSTVQRAAVVSATVLCFA 502
Query: 512 GVYACSTAIAMN 523
+ I N
Sbjct: 503 ASRWLANFIQKN 514
>gi|443474699|ref|ZP_21064670.1| Pheophorbide a oxygenase [Pseudanabaena biceps PCC 7429]
gi|443020589|gb|ELS34534.1| Pheophorbide a oxygenase [Pseudanabaena biceps PCC 7429]
Length = 480
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 134/473 (28%), Positives = 213/473 (45%), Gaps = 68/473 (14%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRL 128
G R +DW E WYP++ +D+ P T+ ++ +V++ D + + + DRCPHRL
Sbjct: 32 GGRDPDRFDWQEVWYPVFYLEDLDKTKPAKFTLLERDLVIWWDRHSNAWQAFDDRCPHRL 91
Query: 129 AKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGV 185
LSEG++ DG LEC YHGW F+G+G C +IPQ P A + ACV + E QG+
Sbjct: 92 VPLSEGRIAEDGLLECPYHGWAFKGDGSCDRIPQQPEGGTAHTSKRACVSSLPTAERQGL 151
Query: 186 VWVWMSQKTPPNPDKLPWFENFARP--GFQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
++++ + K+P E + T +LPYD LLEN++D +H+P +H
Sbjct: 152 LFIYAGKPENAPQVKIPIIEPLETETDKWTLFGTFRDLPYDAITLLENVLDASHLPFTHH 211
Query: 244 RTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVD 301
++ R +A P+ EV E GF G W G + + F AP ++ ++ L
Sbjct: 212 KS--VGNRANAAPMFLEVLETEKYGFKGTWEEGPRRGKLGRQDTTFIAPSLMWHD--LTS 267
Query: 302 SKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQ 357
+ G T ++ PT +G+ L RF S + + F P+WY H + + E
Sbjct: 268 KQFGRT--ITAVY-ATPTRKGECRLFARFPFQFSSAIPRFFIGITPRWYSHIGQNGILED 324
Query: 358 DMGFLSSQNEVLMKETVP-------TKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGH 410
D FL Q L + K YL+ S+DT+V E RKW+ +
Sbjct: 325 DQIFLHYQERYLEQTLAKMEDRANYAKAFYLST-SADTYVTELRKWVSRYQ--------- 374
Query: 411 STISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIK 470
A AG ++P + L +RY H C CS ++
Sbjct: 375 ----------------ADPFAGQQLAAPLVKEV-------LLDRYHSHTSKCASCSQALR 411
Query: 471 AFSTWKN-SLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAM 522
K S+++ A A TV+ +L+ A A++ + G+ + AIA+
Sbjct: 412 NVRRLKTASMTIAAIAWTVIPLLS--------FFAPANITVIGIGSIVVAIAI 456
>gi|356525253|ref|XP_003531241.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 531
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 197/460 (42%), Gaps = 72/460 (15%)
Query: 67 ERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCP 125
E E +DW WYPL D+ P G V +V++ D N G + + D CP
Sbjct: 71 EPEFESHAEKFDWYSHWYPLMPICDLDKRKPHGKRVLGIDVVVWWDRNEGVWQVHDDACP 130
Query: 126 HRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKE 181
HRLA LS+G++ GRL+C+YHGW F G+G+C IPQ P D + ACV Y
Sbjct: 131 HRLAPLSDGRIDQWGRLQCVYHGWCFNGKGECKLIPQAPPDGPPVHTSKKACVAAYPSTV 190
Query: 182 SQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSILLEN 231
++W W PN D + P+ P + + ++ Y + +L+EN
Sbjct: 191 QNDILWFW------PNTDPQYKDIITRKRPPYIPELDDPSYTKLMGNRDISYGYEVLIEN 244
Query: 232 LMDPAHIPISHDRTDWTAK------REDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFL 285
LMDPAH+P +H T K RE +PL + GF G K + +P +
Sbjct: 245 LMDPAHVPYAHYGLMRTPKPKVKVDREGGRPLELSIETLDINGFTANQGWSKSKFMPPCI 304
Query: 286 RFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKW 345
+ Q K+ + F +F+C P GKS LI F + K+ P+W
Sbjct: 305 FYVYTDSDQPASSAETQKSSAQKKFALIFVCVPVSPGKSRLIWCFPRNFGVWIDKIVPRW 364
Query: 346 YFHQNASKVFEQDMGFLSSQNEVLMKET---------VPTKELYLNLRSSDTWVAEYRKW 396
FH +++ + D+ L + + ++ VPTK SD V YR W
Sbjct: 365 IFHVGQNRILDSDLYLLHVEEQKIVDIGPKNWHKACFVPTK--------SDALVIGYRNW 416
Query: 397 MDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYF 456
+ K G G + +LP P + L +RY+
Sbjct: 417 LKKYAGGQVDWRGKYSGALPPTPPREQ---------------------------LMDRYW 449
Query: 457 RHVIHCKGCSSVIKAFSTWKNSLSVVA-AALTVLAILASG 495
HV++CK C+S K+ + + L +++ A++ ++AI+ G
Sbjct: 450 SHVVNCKSCNSAYKSLNVIEVMLQIISVASIGIVAIMKHG 489
>gi|168059614|ref|XP_001781796.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666703|gb|EDQ53350.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 474
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 136/466 (29%), Positives = 207/466 (44%), Gaps = 72/466 (15%)
Query: 67 ERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPH 126
E + E + W WYP+ +D+ P + +++V++KD GE R + D+CPH
Sbjct: 15 EEQKENSEESFVWRNHWYPVSTIEDLDPSVPTPFQLLGRELVVWKDNQGEWRVFVDKCPH 74
Query: 127 RLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLP-----ADAKIPRSACVRTYEVK 180
RLA LSEG+L + G L+C YHGW F G+G C IPQ A A+ AC +Y +
Sbjct: 75 RLAPLSEGRLDESGMLQCSYHGWSFNGDGSCGAIPQAAKEGPEAKARFSPRACAASYPTR 134
Query: 181 ESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDP 235
SQG+++VW +K + P LP F+ P F V+ +L Y + L+EN+ DP
Sbjct: 135 VSQGLLFVWPDEKGWEKASAATPPMLP--PEFSDPRFSTVTIQRDLFYGYDTLMENVSDP 192
Query: 236 AHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQN 295
+HI +H + T +RE A+PL F+V + GF G D P + F PC N
Sbjct: 193 SHIDFAHHKV--TGRRERAKPLPFKVHKSGPWGFT---GANNDSPTIS-CGFYPPCYYYN 246
Query: 296 NRELVDSK--TGEKHYFTGLFLCR---PTGQGKSMLIV-------RFGATKRSPLAKLFP 343
EL+ G++ + + +C P GK+ IV +F + +L P
Sbjct: 247 KIELLVKLPILGDQKW--EVLICSFNVPMSPGKTRSIVCSARNFFQF-SMPGDKWWQLTP 303
Query: 344 KWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNL----RSSDTWVAEYRKWMDK 399
+WY H ++ V++ DM L Q + + Y L +D +V +R W+ +
Sbjct: 304 RWYEHWTSNLVYDGDMIVLQGQEKGFLSYDGDVNAEYSKLTFTPTQADRFVLAFRNWLKR 363
Query: 400 VGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHV 459
G G P F + LP V+ + +R+ +H
Sbjct: 364 HGKGGPEWFPETKTGLPPPSTVLSKR------------------------EMLDRFDQHT 399
Query: 460 IHCKGCSSVIKAFSTWKNSL---SVVAAA-------LTVLAILASG 495
+ C C + F W+ L +VV AA LTV ILA G
Sbjct: 400 LICSSCKKAQQDFQLWQKMLWGSTVVLAAGAGVPPDLTVRVILAGG 445
>gi|255585393|ref|XP_002533392.1| pheophorbide A oxygenase, putative [Ricinus communis]
gi|223526766|gb|EEF28992.1| pheophorbide A oxygenase, putative [Ricinus communis]
Length = 552
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 196/464 (42%), Gaps = 65/464 (14%)
Query: 63 ASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQ 121
A E + Q +DW WYP+ D+ P V +V++ D N E R +
Sbjct: 82 APQPELETDIQGDKFDWYSAWYPVMPVCDLDKRVPHAKKVLGIDVVVWWDRNENEWRVFD 141
Query: 122 DRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTY 177
D CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ PAD ACV Y
Sbjct: 142 DTCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKYIPQAPADGPPVHTFNKACVAAY 201
Query: 178 EVKESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSI 227
++W W PN D K P+ P + ++PY +
Sbjct: 202 PSTVHHDILWFW------PNTDPQYKDILMKEKPPFIPELDDPSYTKTMGNRDIPYGYDF 255
Query: 228 LLENLMDPAHIPISH------DRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPL 281
L+ENLMDPAH+P +H + RE +P+ V + GF G+ K + +
Sbjct: 256 LIENLMDPAHVPYAHYGLMKIRQPKEKVDREGGKPIDMSVKKLDKNGFIGKQEKGSSKFI 315
Query: 282 PN--FLRFEAPCVLQNNRELVDSKTGEK----HYFTGLFLCRPTGQGKSMLIVRFGATKR 335
F + P V Q N + S+T +K +F+C P G S LI F
Sbjct: 316 APCIFYAYTDPLVDQGNGAVSSSETKKKLSVQQRAALVFICIPVSPGNSRLIWAFPRNFG 375
Query: 336 SPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT--KELYLNLRSSDTWVAEY 393
+ K+FP+W FH + + + D+ L + + V K ++ + SD V +
Sbjct: 376 VWIDKIFPRWMFHVGQNLILDSDLYLLHVEERKITDIGVANWQKACFVPTK-SDALVVGF 434
Query: 394 RKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLAN 453
RKW++ G G +LP P + L +
Sbjct: 435 RKWLNNYAGGQVDWRGKYNGALPPTPPREQ---------------------------LMD 467
Query: 454 RYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQ 497
RY+ HV++C C++ K + + L VV +L ++ I+A+ +Q
Sbjct: 468 RYWSHVVNCSSCNAAHKGLNALEVILQVV--SLVLIGIVAAAKQ 509
>gi|449524120|ref|XP_004169071.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Cucumis
sativus]
Length = 545
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 211/457 (46%), Gaps = 66/457 (14%)
Query: 71 ERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQDRCPHRLA 129
E + W + WYP+ L +D+ P + + IV++ D GE + DRCPHRLA
Sbjct: 88 ESSSTPFSWRDNWYPVSLIEDLDPALPTPFQLLGRDIVIWFDKSRGEWVAFDDRCPHRLA 147
Query: 130 KLSEGQLIDG-RLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQ 183
LSEG++ +G L+C YHGW F+G G CVKIPQ ++ R+ AC + SQ
Sbjct: 148 PLSEGRIDEGGNLQCSYHGWSFDGCGSCVKIPQASSEGPESRAHQSPRACATRFPTLVSQ 207
Query: 184 GVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHI 238
G+++VW + P +LP ++F +P F V+ +L Y + L+EN+ DP+HI
Sbjct: 208 GLLFVWPDENGWERANATTPPRLP--DDFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHI 265
Query: 239 PISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRE 298
+H + T +R+ A+PL F++ GF+ G K P + F APC N E
Sbjct: 266 DFAHHKV--TGRRDRAKPLPFKLDTNGPWGFS---GANKGNPRIS-AEFVAPCYYINKVE 319
Query: 299 LVDSK---TGEKHYFTGLFLCR---PTGQGKSMLIV-----RFGATKRSPL-AKLFPKWY 346
+DSK G++ + +++C P G GK+ IV F + P ++ P+W+
Sbjct: 320 -IDSKLPLLGDQKWV--IWICSFNVPMGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWH 376
Query: 347 FHQNASKVFEQDMGFLSSQNEVL--MKETVPTKELYLNL----RSSDTWVAEYRKWMDKV 400
H ++KV++ DM L Q ++ M+ + + Y + +D V +R W+ +
Sbjct: 377 EHWTSNKVYDGDMIVLQGQEKIFLSMEGSTDVNKEYTKITFTPTQADRLVLAFRNWLRRH 436
Query: 401 GHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVI 460
G G P FG S S +P+ V + + +R+ +H +
Sbjct: 437 GKGQPEWFGAS--SQQPLPSTV-----------------------LSKRQMLDRFEQHTL 471
Query: 461 HCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQ 497
HC C K F T + L A + S Q
Sbjct: 472 HCSSCKGAYKTFQTVQRLLIGATVVFAATAGIPSALQ 508
>gi|449443371|ref|XP_004139451.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Cucumis
sativus]
Length = 545
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 210/451 (46%), Gaps = 66/451 (14%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQDRCPHRLAKLSEGQ 135
+ W + WYP+ L +D+ P + + IV++ D GE + DRCPHRLA LSEG+
Sbjct: 94 FSWRDNWYPVSLIEDLDPALPTPFQLLGRDIVIWFDKSRGEWVAFDDRCPHRLAPLSEGR 153
Query: 136 LIDG-RLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVW 189
+ +G L+C YHGW F+G G CVKIPQ ++ R+ AC + SQG+++VW
Sbjct: 154 IDEGGNLQCSYHGWSFDGCGSCVKIPQASSEGPESRAHQSPRACATRFPTLVSQGLLFVW 213
Query: 190 MSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 244
+ P +LP ++F +P F V+ +L Y + L+EN+ DP+HI +H +
Sbjct: 214 PDENGWERANATTPPRLP--DDFDKPEFSSVTIQRDLFYGYDTLMENVSDPSHIDFAHHK 271
Query: 245 TDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSK- 303
T +R+ A+PL F++ GF+ G K P + F APC N E +DSK
Sbjct: 272 V--TGRRDRAKPLPFKLDTNGPWGFS---GANKGNPRIS-AEFVAPCYYINKVE-IDSKL 324
Query: 304 --TGEKHYFTGLFLCR---PTGQGKSMLIV-----RFGATKRSPL-AKLFPKWYFHQNAS 352
G++ + +++C P G GK+ IV F + P ++ P+W+ H ++
Sbjct: 325 PLLGDQKWV--IWICSFNVPMGPGKTRSIVCSARNFFQFSMPGPAWWQVVPRWHEHWTSN 382
Query: 353 KVFEQDMGFLSSQNEVL--MKETVPTKELYLNL----RSSDTWVAEYRKWMDKVGHGMPY 406
KV++ DM L Q ++ M+ + + Y + +D V +R W+ + G G P
Sbjct: 383 KVYDGDMIVLQGQEKIFLSMEGSTDVNKEYTKITFTPTQADRLVLAFRNWLRRHGKGQPE 442
Query: 407 HFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCS 466
FG S S +P+ V + + +R+ +H +HC C
Sbjct: 443 WFGAS--SQQPLPSTV-----------------------LSKRQMLDRFEQHTLHCSSCK 477
Query: 467 SVIKAFSTWKNSLSVVAAALTVLAILASGRQ 497
K F T + L A + S Q
Sbjct: 478 GAYKTFQTVQRLLIGATVVFAATAGIPSALQ 508
>gi|75906758|ref|YP_321054.1| Rieske (2Fe-2S) protein [Anabaena variabilis ATCC 29413]
gi|75700483|gb|ABA20159.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 460
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/433 (28%), Positives = 201/433 (46%), Gaps = 58/433 (13%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRLAKLSEGQ 135
+DW E WYP++ +D+ P T+ + IV++ D + + ++D+CPHRLA LSEG+
Sbjct: 21 FDWHEAWYPVHYLEDLDKSKPTAFTLLGKDIVIWWDQQSQTWQAFEDQCPHRLAPLSEGR 80
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGVVWVWMSQ 192
+ + G LEC YHGW F G+G C +IPQ P A+ + ACV ++ E QG+++V++
Sbjct: 81 INEEGLLECPYHGWSFAGDGSCQRIPQQPEGGQAETSQRACVTSWLTTERQGMLFVYIGN 140
Query: 193 KTPPNPDKLPWFENFARP--GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAK 250
K+P E G+ ++T ++PYD LLEN++DP+H+ +H +T
Sbjct: 141 PENAAKTKIPVVEPLEESPDGWVIINTFRDVPYDALTLLENILDPSHLAYTHHKT--VGN 198
Query: 251 REDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNF-LRFEAPCVLQNNRELVDSKTGEKHY 309
R++A PL EV GF G W + F AP ++ ++ ++S+ G
Sbjct: 199 RKNAAPLELEVVVSGKHGFKGVWHQSIKAGQSELSTTFVAPALMWHD---INSERGR--- 252
Query: 310 FTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGFLSSQ 365
+ P +G+ L RF S L +F P+WY+H + V E D FL Q
Sbjct: 253 ILTVVYATPIRKGECRLFARFPFKFPSKLPGIFIKLRPRWYYHLGQNGVLEDDQIFLHYQ 312
Query: 366 NEVLM-KETVP--TKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVV 422
L K P TK YL + +D++V E R+W++ + P+ + ++PK
Sbjct: 313 ERYLQAKGGSPNFTKAFYLPTK-ADSFVFELRQWVNNY-NAEPFPGQAFSQAIPK----- 365
Query: 423 EHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSV---IKAFSTWKNSL 479
L RY+ H I C C + I+ W +
Sbjct: 366 --------------------------EQLLERYYSHTIKCASCRNALAKIQKLRLWSGVI 399
Query: 480 SVVAAALTVLAIL 492
+V++ T L L
Sbjct: 400 TVISLVSTPLITL 412
>gi|125546114|gb|EAY92253.1| hypothetical protein OsI_13973 [Oryza sativa Indica Group]
Length = 556
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 213/513 (41%), Gaps = 106/513 (20%)
Query: 63 ASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD--------GN 114
AS +E R +DW ++WYP+ D+ AP G TV +IV + D G
Sbjct: 65 ASGKEER-------FDWLDQWYPVAPVCDLDPGAPHGKTVLGLRIVAWFDRTTAAADGGG 117
Query: 115 GELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPR 170
GE R + D CPHRLA LSEG++ D GRL+C+YHGW F+G G C IPQ PA
Sbjct: 118 GEWRVFDDSCPHRLAPLSEGRVDDKGRLQCVYHGWCFDGRGACQFIPQAPALGPAVHKNS 177
Query: 171 SACVRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDH 225
ACV +Y ++W + + P + L P+ P F V + +LPY +
Sbjct: 178 KACVASYPCVVQNNILWFY-PRSEPEYKEILQRKRPPYIPQIDDPSFVTVYGVRDLPYGY 236
Query: 226 SILLENLMDPAHIPISHDRTDWTAKRED------------------AQPLGFEVTERTDR 267
+L+ENLMDPAH+P +H T K+ED PL E+ E
Sbjct: 237 DVLVENLMDPAHVPYAHKGLMRTRKKEDPGRYNIHLLYTVEFDKEGGGPLKMEIEETNVE 296
Query: 268 GFAGRWGKEKDEPLPNFLRFEAPCVLQNN-----------------RELVDSKTGEKH-- 308
GF + F +F APC + + +D + EK
Sbjct: 297 GFLSMLDR-------GFFKFVAPCTFYGSPLQTPSQALFKLIEPSYKISIDDQGKEKKKK 349
Query: 309 --YFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFL--SS 364
+FLC P G+S L+ F + K+ P+WY+H + + + D+ L
Sbjct: 350 QPTVMLVFLCIPVSPGRSRLVWAFPRNVGVWMDKIIPRWYYHIGQNAILDSDIYLLHIEE 409
Query: 365 QNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEH 424
+N + K Y+ SSD + +R W K + G +T ++P
Sbjct: 410 RNFATVGLDNWQKACYVPT-SSDNMIITFRNWFRKY---CKHQIGWATPITNQLP----- 460
Query: 425 APAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAA 484
+P+K L +RY+ HV+ C CS +K + +L V +
Sbjct: 461 -----------PTPSKD--------QLLDRYWSHVMQCTSCSGALKKMKALEVALQVASV 501
Query: 485 ALTVLAILASGR-----QWKAFCLASASLCLAG 512
A+ +A G ++ +A+A LC A
Sbjct: 502 AVVGFLAVAKGTVVTSVVQRSAVVAAAVLCFAA 534
>gi|356512495|ref|XP_003524954.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
max]
Length = 529
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 129/462 (27%), Positives = 201/462 (43%), Gaps = 77/462 (16%)
Query: 67 ERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCP 125
E E +DW +WYPL D+ P G V +V++ D N G + + D CP
Sbjct: 70 EPEFESHAEKFDWYSQWYPLMPICDLDKRKPHGKRVLGIDVVVWWDRNEGAWQVHDDACP 129
Query: 126 HRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKE 181
HRLA LS+G++ GRL+C+YHGW F G+G+C IPQ D + ACV Y
Sbjct: 130 HRLAPLSDGRIDQWGRLQCVYHGWCFNGKGECQLIPQALPDGPPVHTSKKACVAAYPSTV 189
Query: 182 SQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSILLEN 231
++W W PN D + P+ P + ++PY + +L+EN
Sbjct: 190 QNDILWFW------PNTDPQYKDIITRKRPPFIPEIDDPSYTKSMGNRDIPYGYEVLIEN 243
Query: 232 LMDPAHIPISH------DRTDWTAKREDAQPLGFEVTERTDRGFAGR--WGKEKDEPLPN 283
LMDPAH+P +H + A RE +PL + + GF+ WGK K
Sbjct: 244 LMDPAHVPYAHYGLMRTPQPKVKADREGGRPLDMSIEKLDINGFSANQAWGKSK------ 297
Query: 284 FLRFEAPCVLQNNRELVDSKTGE------KHYFTGLFLCRPTGQGKSMLIVRFGATKRSP 337
F PC+ + +GE K +F+C P GKS LI F
Sbjct: 298 ---FMPPCIFYAYTPDQPASSGETKKSSAKKKMCLIFVCVPVSPGKSRLIWCFPRNFGLW 354
Query: 338 LAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT---KELYLNLRSSDTWVAEYR 394
+ K+ P+W FH + + + D+ +L E +K+ P K ++ + SD V YR
Sbjct: 355 MDKIVPRWIFHVGQNLILDSDL-YLLHVEEHKLKDIGPNNWHKACFVPTK-SDALVIGYR 412
Query: 395 KWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANR 454
W+ K G G + +LP P + L +R
Sbjct: 413 TWLRKYAGGQVDWRGKYSGALPPTPPREQ---------------------------LLDR 445
Query: 455 YFRHVIHCKGCSSVIKAFSTWKNSLSVVA-AALTVLAILASG 495
Y+ HV++CK C+S K+ + + L +++ A++ ++A++ G
Sbjct: 446 YWSHVVNCKSCNSAYKSLNAVEVMLQIISVASIGIVAVMKHG 487
>gi|357120753|ref|XP_003562089.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like
[Brachypodium distachyon]
Length = 524
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 149/537 (27%), Positives = 239/537 (44%), Gaps = 96/537 (17%)
Query: 7 SLFFSPLLKIPSPKLTPPTTNVIISLNKTPKSRKCHAVTDRSST--------STVGDHKV 58
SLF SP SP L P ++ SL P SR+ R+ T S G+ +
Sbjct: 5 SLFLSP-----SPPLHRP---LLPSLPARPASRRNGLRRARAGTRLRVAAPPSVPGEAER 56
Query: 59 LVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GEL 117
P+++ GER V W + WYP+ L +D+ P + ++ +V++KD N GE
Sbjct: 57 TEEPSTSSPESGERFV----WRDHWYPVSLVEDLDPRVPTPFQLLNRDLVIWKDPNSGEW 112
Query: 118 RCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS----- 171
DRCPHRLA LSEG++ + G L+C YHGW F+G G C KIPQ + R+
Sbjct: 113 AALDDRCPHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTKIPQAAPEGPEARAVRSPR 172
Query: 172 ACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHS 226
AC + SQG+++VW + P LP E F P F V+ +L Y +
Sbjct: 173 ACAIKFPTLVSQGLLFVWPDENGWEKAKATKPPMLP--EEFNDPAFSTVTIQRDLFYGYD 230
Query: 227 ILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFL- 285
L+EN+ DP+HI +H + T +R+ A+PL F++ G++G + P
Sbjct: 231 TLMENVSDPSHIEFAHHKV--TGRRDRARPLTFKMESSGAWGYSG-----ANSGNPRITA 283
Query: 286 RFEAPCVLQNNRELVDSK---TGEKHYFTGLFLCR---PTGQGKSMLIV-------RFGA 332
FEAPC N E +D+K G++ + +++C P GK+ IV +F
Sbjct: 284 TFEAPCYALNKIE-IDTKLPILGDQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFTM 340
Query: 333 TKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLM----KETVPTKELYLNL----R 384
++ + P+WY H ++ V++ DM L Q +V + + + + Y L
Sbjct: 341 PGKA-WWQFIPRWYEHWTSNLVYDGDMIVLQGQEKVFLSASKESSADVNQQYTKLTFTPT 399
Query: 385 SSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIG 444
+D +V +R W+ K G+ P FG SP++ A+
Sbjct: 400 QADRFVLAFRAWLRKFGNSQPDWFG---------------------------SPSQEALP 432
Query: 445 T--MHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWK 499
+ + + +RY +H + C C +F T + A A + + Q++
Sbjct: 433 STVLSKREMLDRYEQHTLKCSSCKGAYNSFQTLQKVFMGATVAFGATAGIPAEVQFR 489
>gi|428304409|ref|YP_007141234.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
gi|428245944|gb|AFZ11724.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
Length = 468
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 139/457 (30%), Positives = 202/457 (44%), Gaps = 56/457 (12%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRL 128
G A +D E WYP++ +D+ P T+ Q +V++ D G R D+CPHRL
Sbjct: 18 GGNDPARFDCKEAWYPVFYIEDLDKSKPSKFTLLGQDLVIWWDKQGNSWRALADQCPHRL 77
Query: 129 AKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGV 185
A LSEG++ DG LEC YHGW F GEGKC +IPQ A+ K S ACV ++ QG+
Sbjct: 78 APLSEGRIAEDGLLECPYHGWAFTGEGKCDRIPQQQAENKAHASQRACVASFPTVTRQGL 137
Query: 186 VWVWMSQKTPPNPDKLPWFENFARP--GFQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
++++ + K+P E G+ ++T +LPYD LLEN++D +H+P +H
Sbjct: 138 LFIYPGEPENAFNVKVPIIEPIEESPDGWICLNTFRDLPYDALTLLENVLDASHVPFTHH 197
Query: 244 RTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVD 301
R+ R +A P+ EV +GF G W G K F F AP ++ + +L
Sbjct: 198 RS--VGNRTNAAPVELEVVASDKQGFKGIWEEGPRKGTLGKQFTTFIAPALMWH--DLTS 253
Query: 302 SKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQ 357
+ G + P +G+ + RF S L LF P+WY H + V E
Sbjct: 254 KQFGRT---LTVVYATPIRKGECRIFARFPFKFSSKLPGLFLKLTPRWYSHLGQNNVLED 310
Query: 358 DMGFLSSQNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTIS 414
D FL Q L + K YL R +DT+V RKW+++ P F T S
Sbjct: 311 DQIFLHYQERYLAAKGGGANFAKAFYLPTR-ADTFVTALRKWVNEY-QADP--FPEETFS 366
Query: 415 LPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFST 474
P V L +RY H I C CS ++
Sbjct: 367 PPLSTEV-----------------------------LLDRYHSHTIKCASCSQALRNIKR 397
Query: 475 WKNSLSVVAA-ALTVLAILASGRQWKAFCLASASLCL 510
+ + V A ALT+L + S + AS+ +
Sbjct: 398 IRWGIGVSGAIALTMLPLFNSAFGQPTMLVTIASVII 434
>gi|449452795|ref|XP_004144144.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Cucumis sativus]
Length = 481
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 147/498 (29%), Positives = 216/498 (43%), Gaps = 93/498 (18%)
Query: 63 ASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQ 121
++E R+ E + +DW EWYP+ D+ P+G V +V++ D N + +
Sbjct: 7 VTSERRKMEEE--KFDWFSEWYPVMPVCDLDKKVPIGKKVLGLDLVVWWDRNENAWKVFD 64
Query: 122 DRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTY 177
D CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P D + AC Y
Sbjct: 65 DSCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHSSKKACAAVY 124
Query: 178 EVKESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSI 227
G+VW W PN D K P+ P + + ++ Y + +
Sbjct: 125 PSTTQNGIVWFW------PNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNRDMAYGYEV 178
Query: 228 LLENLMDPAHIPISHDRT------DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPL 281
L+ENLMD AH+P +H + RE +PL V + GF G KDE L
Sbjct: 179 LIENLMDLAHLPYAHYGIMPAPPPMKNSDRERGRPLEMVVEKLKADGFVG-----KDETL 233
Query: 282 PNFLRFEAPCVLQ--NNRELVDSKTGEK------------------HYFTGLFLCRPTGQ 321
+ +F APCV + ELV K F F C P
Sbjct: 234 RH--KFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANKPPTEISRRTFLA-FFCIPVSP 290
Query: 322 GKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT---KE 378
GKS LI F + + P+W FH + + + DM +L E +E P+ K
Sbjct: 291 GKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDM-YLLHVEEHKYEEIGPSNWHKA 349
Query: 379 LYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSP 438
Y+ ++ SD +V +R+W++K G G + SLP + +P LV
Sbjct: 350 CYVPVK-SDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSL------SPRALV-------- 394
Query: 439 AKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVA-AALTVLAILASG-- 495
RY+ HV++CK C+ KA + + SL V++ AA+ VLA+ +G
Sbjct: 395 -------------LERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVI 441
Query: 496 -RQWKAFCLASASLCLAG 512
+ +A A +C A
Sbjct: 442 SAKVRATIFIIAIVCFAA 459
>gi|326494078|dbj|BAJ85501.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326495628|dbj|BAJ85910.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522616|dbj|BAK07770.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 211/500 (42%), Gaps = 80/500 (16%)
Query: 62 PASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCY 120
P EE+ E +DW ++WYPL D+ AP G TV ++V + D E R +
Sbjct: 63 PFGGEEKAEE--AGSFDWLDQWYPLAPVCDLDPGAPHGKTVLGLRVVAWYDRAVDEWRVF 120
Query: 121 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSACVRT 176
D CPHRLA LSEG++ D GRL+C+YHGW F+G G C IPQ PA ACV +
Sbjct: 121 DDACPHRLAPLSEGRIDDKGRLQCVYHGWCFDGRGSCQFIPQAPALGPPVHKNSKACVAS 180
Query: 177 YEVKESQGVVWVW----------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHS 226
Y ++W + + +K PP + P F V + +LPY +
Sbjct: 181 YPSVVQNNILWFYPKADAQHQDVLQRKRPP------FIPEIDDPSFVTVYGVRDLPYGYD 234
Query: 227 ILLENLMDPAHIPISHDRTDWTAKR-----------EDAQPLGFEVTERTDRGFAGRWGK 275
+L+ENLMDPAH+P +H ++ E P+ ++ E GF
Sbjct: 235 VLVENLMDPAHVPYAHKGLMGKLRKKEDPGRVEFDVEGGGPVKMKIAEADIAGFL----S 290
Query: 276 EKDEPLPNFLRFEAPCV-----LQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRF 330
E+D + R+ APC L E + K + F +F+C P GKS +I F
Sbjct: 291 EQDN--SGYFRYVAPCTFYGSPLPKEEEGEEKKKKKPPQFMLVFMCVPVSPGKSRVIWAF 348
Query: 331 GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT--KELYLNLRSSDT 388
L K+ P+WY+H + + + D+ L + V K +Y+ SSD
Sbjct: 349 PRNIGVWLDKVIPRWYYHIGQNAILDSDIYLLHIEERNFAAAGVENWQKAVYVP-TSSDN 407
Query: 389 WVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHA 448
V +R W K G + ++ ++P +P K
Sbjct: 408 MVIAFRNWFRKHCKS---QVGWAAPTIGQLP----------------ETPTKD------- 441
Query: 449 PNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGR-----QWKAFCL 503
L RY+ HV C+ CS+ +K + +L V + A+ +A G +A +
Sbjct: 442 -KLMERYWSHVAQCRSCSTALKTMKALEVALQVASVAVVGFLAVAKGTLVTSVVQRAAVV 500
Query: 504 ASASLCLAGVYACSTAIAMN 523
A LC A ++ I N
Sbjct: 501 TLAVLCFAASRWLASFIEKN 520
>gi|357518875|ref|XP_003629726.1| Pheophorbide a oxygenase [Medicago truncatula]
gi|355523748|gb|AET04202.1| Pheophorbide a oxygenase [Medicago truncatula]
Length = 529
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/500 (27%), Positives = 207/500 (41%), Gaps = 79/500 (15%)
Query: 66 EERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRC 124
+E E +DW +WYPL D+ AP V +V++ D N + + D C
Sbjct: 68 DEPEVETGSEKFDWYSQWYPLMPICDLDKRAPHAKKVMGIDVVIWWDRNESAWQVFDDAC 127
Query: 125 PHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVK 180
PHRLA LSEG++ GRL+C+YHGW F G G C IPQ P + + ACV Y
Sbjct: 128 PHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPIHTSKKACVAAYPST 187
Query: 181 ESQGVVWVW----------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLE 230
++W W +++KTP P+ P F + ++ Y + +L+E
Sbjct: 188 VQNDILWFWPNSDPQYKDIITRKTP------PFIPEIDDPSFTSLMGNRDIAYGYEVLIE 241
Query: 231 NLMDPAHIPISH------DRTDWTAKREDAQPLGFEVTERTDRGFAGR--WGKEKDEPLP 282
NLMDP+H+P +H + A RE +PL + E GF W K K P
Sbjct: 242 NLMDPSHVPYAHYGLMKTPQPKVKADREGGRPLELSIEELDVNGFTANQGWSKSKFMPPS 301
Query: 283 NFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF 342
F + P ++ E S +K F +F+C P G S LI F + K+
Sbjct: 302 IFYAYTDPNKPASSEETKKSSVQKK--FALIFICIPVSPGNSRLIWCFPRNFGLWIDKIV 359
Query: 343 PKWYFHQNASKVFEQDMGFLSSQNEVLMKET---------VPTKELYLNLRSSDTWVAEY 393
P+W FH + + + D+ L + + +M VPTK +D V +
Sbjct: 360 PRWIFHVGQNLILDSDLYLLHVEEKKIMDVGQANWHKACFVPTK--------ADALVIGF 411
Query: 394 RKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLAN 453
RKW+ K G G +LP P + L +
Sbjct: 412 RKWLKKYAGGEVEWRGKYNGALPPTPPREQ---------------------------LLD 444
Query: 454 RYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGV 513
RY+ H ++CK C+ K+ + + L +++ A + I+A+ +Q S+ L V
Sbjct: 445 RYWSHTVNCKSCNFAYKSLNVVEVMLQIISVA--SIGIVATMKQGVVSATTRNSMVLLAV 502
Query: 514 --YACSTAIAMNTTNFIRTH 531
+A S +A R H
Sbjct: 503 LSFALSRLLAHFIYKNFRYH 522
>gi|242037721|ref|XP_002466255.1| hypothetical protein SORBIDRAFT_01g004440 [Sorghum bicolor]
gi|241920109|gb|EER93253.1| hypothetical protein SORBIDRAFT_01g004440 [Sorghum bicolor]
Length = 525
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/460 (29%), Positives = 202/460 (43%), Gaps = 62/460 (13%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQDRCPHRLAKLSEGQ 135
+DW ++WYP D+ AP G TV +V + D G GE R + D CPHRLA LSEG+
Sbjct: 82 FDWLDQWYPFAPVCDLDPRAPHGKTVLGLSVVAWYDRGAGEWRVFDDACPHRLAPLSEGR 141
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSACVRTYEVKESQGVVWVWMS 191
+ D GRL+C+YHGW F+G G C IPQ PA ACV +Y ++W +
Sbjct: 142 IDDKGRLQCVYHGWCFDGAGACKFIPQAPALGPPVHTSPKACVASYPCVVQNNILWFY-P 200
Query: 192 QKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD--- 243
+ P D L P+ P F V I +LPY + IL+ENL+DPAH+P +H
Sbjct: 201 RADPEYKDVLQRKRPPFIPEIDDPEFVTVYGIRDLPYGYDILIENLLDPAHVPYAHKGII 260
Query: 244 RTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCV--LQNNRELVD 301
R RE P ++ + +GF +E+ + +F APC + +
Sbjct: 261 RGILEYDREGGGPSKMKIEQANIQGFVS--PQER-----GYFQFVAPCTSFAAPFPQPQE 313
Query: 302 SKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGF 361
K + +FLC P G+S +I F L + P+W +H + V + D+
Sbjct: 314 DKKKKVPRVMLVFLCIPVSPGRSRVIWAFPRNIGVWLHHITPRWLYHVGQNLVLDSDIFL 373
Query: 362 LSSQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVP 419
L + + K Y+ SSD+ V +R W K G +T + ++P
Sbjct: 374 LHVEERKFATVGLDNWQKACYVPT-SSDSMVVAFRNWFKKFSKN---QIGWATPQIDQLP 429
Query: 420 AVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSL 479
+P K L RY+ HV C C++ +KA + L
Sbjct: 430 ----------------PTPTKD--------QLMERYWSHVAQCTSCNAALKAMKALEVVL 465
Query: 480 SVVAAALTVLAILASGRQ-------WKAFCLASASLCLAG 512
V A++ V+ LA ++ +A +++A LC A
Sbjct: 466 QV--ASVAVVGFLAVAKETLVTSTVQRAAVVSAAVLCFAA 503
>gi|307107837|gb|EFN56079.1| hypothetical protein CHLNCDRAFT_145588 [Chlorella variabilis]
Length = 563
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 177/374 (47%), Gaps = 56/374 (14%)
Query: 65 AEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRC 124
++E + E+ A ++W ++WYP+ KD+PDDAP G + +Q IV++KDG G RC +D C
Sbjct: 75 SQEEQPEQPEATFNWFDQWYPIAYVKDIPDDAPYGFVLLEQPIVIWKDGGGAYRCLRDAC 134
Query: 125 PHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQ 183
PHRL LS+G++ +G L+C YHGWQF+G G C +PQ A Y+ Q
Sbjct: 135 PHRLVPLSDGRIAPNGELQCPYHGWQFKGCGTCTLMPQ--GGDPTAPRAAATAYQCAVKQ 192
Query: 184 GVVWVWM-------------SQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLE 230
G+VWV + S T P DK WF F D+ ++PYD + L+E
Sbjct: 193 GLVWVKLQPAPTDGSEPDTSSIHTIPELDKEGWF------AFGDM--WRDIPYDWATLIE 244
Query: 231 NLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFE 288
N++D H+P +H + V ER GF G W G K RFE
Sbjct: 245 NVVDCGHVPFTH----------HGERAALGVLERGQFGFQGVWPTGPRKGALGAQHTRFE 294
Query: 289 APCVLQNNRELVDSKT-GEKHYFTGLFLCRPTGQGKSMLIVRFG---ATKRSPLA-KLFP 343
P ++++ + D++ G G+ P G+ IVR K PLA K+ P
Sbjct: 295 GPVLMRHTIDAFDTRGFGNITAVYGV----PVAPGRCRAIVRQPFRFKNKLLPLAFKVMP 350
Query: 344 KWYFHQNASKVFEQDMGFLSSQNEVLM----KETV-------PTKELYLNLRSSDTWVAE 392
+ H + V ++D FL Q +E+V P ++Y +SD +V+
Sbjct: 351 AFLGHLGNNSVLDEDNIFLHMQARACFLPAEQESVRRGMGEKPAGQVYYMPAASDAYVSA 410
Query: 393 YRKWMDKVGHGMPY 406
+R WM V G P+
Sbjct: 411 FRNWMKSVAGGGPF 424
>gi|359478456|ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Vitis vinifera]
Length = 532
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 139/508 (27%), Positives = 208/508 (40%), Gaps = 105/508 (20%)
Query: 35 TPKSRKCHAVTDRSSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPD 94
T +SR AV+ ST V + V S EE+ ++W +WYP+ D+
Sbjct: 42 TARSRVVTAVSSTVSTEPVNPVEPEVQSHSQEEK--------FNWLLQWYPVMPVCDLDK 93
Query: 95 DAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEG 152
P V +V++ D N + + D CPHRLA LSEG++ GRL+C+YHGW F G
Sbjct: 94 RIPHAKKVIGLDVVVWWDRNENAWKVFDDMCPHRLAPLSEGRIDQWGRLQCVYHGWCFNG 153
Query: 153 EGKCVKIPQLPADA---KIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD---------- 199
G C IPQ P D + ACV Y +VW W PN D
Sbjct: 154 SGDCKFIPQAPPDGPPVHTFKKACVSVYPSTVQNDIVWFW------PNTDPQYKDILMKN 207
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH--------DRTDWTAKR 251
K P+ P + + E+PY + +L+ENLMDPAH+P +H + A R
Sbjct: 208 KPPYIPELDDPSYTRLMGNREIPYGYEVLIENLMDPAHVPYAHYGIMTVPSQKKRVKADR 267
Query: 252 EDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL-----------V 300
E +PL ++ + GF G+ +F PCV + +L V
Sbjct: 268 EGGRPLEMKIQKLDRSGFIGKQEGGTS-------KFIPPCVFYVSSDLFIDKTNGSASSV 320
Query: 301 DSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMG 360
++K + +F+C P G S LI F + ++ P+W FH + + + D+
Sbjct: 321 ETKKEVQRRMLLIFICIPVSPGNSRLIWTFPRNFGVWVDRVVPRWMFHVGQNLILDSDLY 380
Query: 361 FLSSQNEVLMKET---------VPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHS 411
L + +M VPTK SD V +RKW++K G
Sbjct: 381 LLHVEERKIMDIGPSNWQKACFVPTK--------SDACVVGFRKWLNKYAGGQVDWGTKF 432
Query: 412 TISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKA 471
+ +LP P L +RY+ HV++C C IK
Sbjct: 433 SGALPPTPP---------------------------REQLMDRYWSHVVNCSSCRVAIKG 465
Query: 472 FSTWKNSLSVVAAALTV--LAILASGRQ 497
N+L VV ++V + I+A+ +Q
Sbjct: 466 L----NALEVVLQVISVASIGIVAATKQ 489
>gi|218439150|ref|YP_002377479.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
gi|218171878|gb|ACK70611.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
Length = 474
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 133/469 (28%), Positives = 203/469 (43%), Gaps = 68/469 (14%)
Query: 48 SSTSTVGDHKVLVGPA---SAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFD 104
+ST + + + P+ + E G +DW E WYP++ KD+ P T+ D
Sbjct: 2 TSTELISSNTLSATPSFNQTDELPAGGLDANHFDWQEVWYPIHYVKDLDKTKPTPFTLLD 61
Query: 105 QQIVLYKDGNGEL-RCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQL 162
+++V++ D N + R + D+CPHRLA LSEG++ + G +EC YHGW F G GKC IPQ
Sbjct: 62 RKLVIWWDKNASVWRVFDDKCPHRLALLSEGRINEQGLIECPYHGWTFSGSGKCEFIPQQ 121
Query: 163 --PADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD------ 214
+A+ + ACV + QG+++ + P NP+ P + +D
Sbjct: 122 REGTNAEESKRACVTSLPTTVCQGLLFTY-----PGNPENAPKVKVPIIESLEDNSGEWV 176
Query: 215 -VSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRW 273
+ T +LPYD LLEN++D +H+P +H T R +A P+ E+ + +GF G W
Sbjct: 177 CIDTFRDLPYDALTLLENVLDASHVPFTHHGT--VGNRNNAAPVELELVKSGRQGFTGIW 234
Query: 274 --GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFG 331
G K F AP + +L + G + P +GK L RF
Sbjct: 235 EEGPRKGTLGKQDTLFIAPNFM--THDLTSKQFGRT---LTVVYATPISKGKCRLFARFP 289
Query: 332 ATKRSPLAKLF----PKWYFHQNASKVFEQDMGFLSSQNEVLMKETVP---TKELYLNLR 384
S L K F P+WY H N + + E D FL Q L + TK YL +
Sbjct: 290 FQFSSKLPKFFINLTPRWYSHTNQNTILEDDQIFLHYQERFLEEAGGSQNYTKACYLPTK 349
Query: 385 SSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIG 444
+D +V R+W++ P+ LPK
Sbjct: 350 -ADIYVNGLRQWVNDY-DAEPFKDQPLPPPLPK--------------------------- 380
Query: 445 TMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILA 493
L +RY+ H +HC CS + K +L ++ A +L LA
Sbjct: 381 ----EQLLDRYYSHTVHCGSCSKALANIQRLKMALGILTAIALILTPLA 425
>gi|425457635|ref|ZP_18837336.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9807]
gi|389800952|emb|CCI19818.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9807]
Length = 460
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 168/345 (48%), Gaps = 23/345 (6%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-ELRCYQDRCPHRL 128
G + +D + WYP+Y KD+ P T+ ++ +V++ D N E R ++D+CPHRL
Sbjct: 11 GGTDIDRFDCRQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRL 70
Query: 129 AKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGV 185
A LSEG+L + G LEC YHGW F G G C IPQ P + A R ACVR++ QG+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGL 130
Query: 186 VWVWMSQKTPPNPDKLPWFENFARPG--FQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
++V+ +P E G + + T +LPY L+EN++D +HIP +H
Sbjct: 131 LFVYAGNPENAPLTAIPIIEAMEEDGDAWICLDTFRDLPYSAVTLMENIIDSSHIPYTHH 190
Query: 244 RTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVD 301
T R +A P+ E+ E +GF G W G K + + F AP ++ + +L
Sbjct: 191 LT--IGNRANAAPMELEIIESNRQGFKGIWPEGPRKGQLGQQYSNFIAPGLIYH--DLTS 246
Query: 302 SKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQ 357
K G + P QG+ L RF S L K F P WY H N + + E
Sbjct: 247 EKFGRT---LTVVYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILED 303
Query: 358 DMGFLSSQNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDK 399
D FL Q L + ++ YL + +D V EYR W+++
Sbjct: 304 DQIFLYYQERYLQAQGGSQNFSQACYLPTK-ADLLVFEYRNWVNQ 347
>gi|449527264|ref|XP_004170632.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Cucumis sativus]
Length = 538
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 143/516 (27%), Positives = 208/516 (40%), Gaps = 108/516 (20%)
Query: 49 STSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIV 108
ST +G+ P A E ER +DW +WYP+ D+ P G V +V
Sbjct: 55 STEEIGN------PLEAVEAESER----FDWYAQWYPIMPICDLDKRVPHGKRVMGIDVV 104
Query: 109 LYKDGNGE-LRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA 166
++ D N + + D CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P D
Sbjct: 105 VWWDKNESGWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDG 164
Query: 167 ---KIPRSACVRTYEVKESQGVVWVW----------MSQKTPPNPDKLPWFENFARPGFQ 213
+ ACV Y ++W W M++KTP P+ P +
Sbjct: 165 PPVHTSKRACVSVYPSVVQNDILWFWPNSDPQYKDIMAKKTP------PYIPEIDDPSYA 218
Query: 214 DVSTIHELPYDHSILLENLMDPAHIPISH-------DRTDWTAKREDAQPLGFEVTERTD 266
+ +LPY + IL ENLMDPAH+P +H + A E QP+ V +
Sbjct: 219 KLIISRDLPYGYEILTENLMDPAHVPYAHYGLIRRQQTKNKKADEEGGQPIDIVVRDLDV 278
Query: 267 RGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTG-------------- 312
GF G +F APCV + L + KH G
Sbjct: 279 HGFISNQGLGHG-------KFVAPCVTYTSLNLPSKERNAKHQDNGTPSLDENNTVAPKT 331
Query: 313 -------LFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
+F+C P GKS +I + ++ P+W FH + V + D L +
Sbjct: 332 SQRKTMVVFMCIPISPGKSRVIFIPLRNFAVWVNRIIPRWMFHLGQNLVMDSDSYLLHVE 391
Query: 366 NEVLMKETVPT--KELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVE 423
++ + K +L + SD V +R+W++K Y GH
Sbjct: 392 ERKILDAGLANWQKACFLPTK-SDAKVVAFRRWLNK------YSDGHVDWR--------- 435
Query: 424 HAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVA 483
G +G+ SP K L RY+ HV++C C K N+L VV
Sbjct: 436 ----GKFSGILPPSPPK--------EQLMERYWSHVVNCSSCKVAYKGL----NALEVVL 479
Query: 484 AALTV--LAILASGRQ------WKAFCLASASLCLA 511
+++ L I A+ +Q + +A A LC A
Sbjct: 480 QVISIASLGIFAATKQSLVSGAARVLMVAMAILCFA 515
>gi|30088964|gb|AAP13565.1| lethal leaf spot 1-like protein [Vigna unguiculata]
Length = 545
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/476 (27%), Positives = 220/476 (46%), Gaps = 75/476 (15%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+ W + WYP+ L +D+ P + ++IV + + D+CPHRLA LSEG++
Sbjct: 95 FTWRDHWYPVSLIEDLNPLLPTPFQLLGREIVRTTSPLPKWVAFDDKCPHRLAPLSEGRI 154
Query: 137 I-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVWM 190
DG+L+C YHGW F+G G CVKIPQ ++ R+ AC + SQG+++VW
Sbjct: 155 DEDGKLQCSYHGWSFDGCGSCVKIPQAASEGPEARAVGSPKACATRFPTLVSQGLLFVWP 214
Query: 191 SQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
+ + P LP + F +P F V+ +L Y + L+EN+ DP+HI +H +
Sbjct: 215 DENGWEKASASKPPMLP--DEFEKPEFATVNIQRDLFYGYDTLMENVSDPSHIEFAHHKV 272
Query: 246 DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNF-LRFEAPCVLQNNRELVDSK- 303
T +R+ A+PL F++ R GF+G +E P +F APC N E +D+K
Sbjct: 273 --TGRRDRAKPLPFKMDARGSWGFSG-----ANEGNPKISAKFVAPCYYMNKIE-IDTKL 324
Query: 304 --TGEKHYFTGLFLCR---PTGQGKSMLIVR----FGATKRSPL-AKLFPKWYFHQNASK 353
G++ + +++C P GK+ I F T P ++ P+WY H ++K
Sbjct: 325 PVVGDQKWV--VWICSFNVPMAPGKTRSIFSARNFFQFTVPGPAWWQVVPRWYEHWTSNK 382
Query: 354 VFEQDMGFLSSQNEVLMKETVPTKELYLNLRS-------SDTWVAEYRKWMDKVGHGMPY 406
V++ DM L Q ++ + +T ++ S +D +V +R W+ + G+G P
Sbjct: 383 VYDGDMIVLQGQEKIFLSKTKEGDDINKQYTSITFTPTQADRFVLAFRNWLRRHGNGQPE 442
Query: 407 HFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCS 466
F S+P +P P+ +++ + +R +H + C C
Sbjct: 443 WFS----SIPDLP-----LPSTVLSKR----------------EMLDRLEQHTLKCSSCK 477
Query: 467 SVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAM 522
+ F W+ L + + + Q++ + LAG+ S A+A
Sbjct: 478 EAYEGFQIWQKVLIGATVIFCATSGIPADVQFR--------VLLAGLAIVSAALAF 525
>gi|449452684|ref|XP_004144089.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Cucumis sativus]
Length = 538
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 206/516 (39%), Gaps = 108/516 (20%)
Query: 49 STSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIV 108
ST +G+ P A E ER +DW +WYP+ D+ P G V +V
Sbjct: 55 STEEIGN------PLEAVEAESER----FDWYAQWYPIMPICDLDKRVPHGKRVMGIDVV 104
Query: 109 LYKDGN-GELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA 166
++ D N + + D CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P D
Sbjct: 105 VWWDKNESGWKVFDDLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDG 164
Query: 167 ---KIPRSACVRTYEVKESQGVVWVW----------MSQKTPPNPDKLPWFENFARPGFQ 213
+ ACV Y ++W W M++KTP P+ P +
Sbjct: 165 PPVHTSKRACVSVYPSVVQNDILWFWPNSDPQYKDIMAKKTP------PYIPEIDDPSYA 218
Query: 214 DVSTIHELPYDHSILLENLMDPAHIPISH-------DRTDWTAKREDAQPLGFEVTERTD 266
+ +LPY + IL ENLMDPAH+P +H + A E QP+ V +
Sbjct: 219 KLIISRDLPYGYEILTENLMDPAHVPYAHYGLIRRQQTKNKKADEEGGQPIDIVVRDLDV 278
Query: 267 RGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTG-------------- 312
GF G +F APCV + L + KH G
Sbjct: 279 HGFISNQGLGHG-------KFVAPCVTYTSLNLPSKERNAKHQDNGTPSLDENNTVAPKT 331
Query: 313 -------LFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
+F+C P GKS +I + ++ P+W FH + V + D L +
Sbjct: 332 SQRKTMVVFMCIPISPGKSRVIFIPLRNFAVWVNRIIPRWMFHLGQNLVMDSDSYLLHVE 391
Query: 366 NEVLMKETVPT--KELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVE 423
++ + K +L + SD V +R+W++K Y GH
Sbjct: 392 ERKILDAGLANWQKACFLPTK-SDAKVVAFRRWLNK------YSDGHVDWR--------- 435
Query: 424 HAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVA 483
G +G+ SP K L RY+ HV++C C K N+L VV
Sbjct: 436 ----GKFSGILPPSPPK--------EQLMERYWSHVVNCSSCKVAYKGL----NALEVVL 479
Query: 484 AALTV--LAILASGRQ------WKAFCLASASLCLA 511
+++ L I A+ +Q + L A C A
Sbjct: 480 QVISIASLGIFAATKQSFVSGAARVLMLVMAIFCFA 515
>gi|449452680|ref|XP_004144087.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Cucumis sativus]
Length = 544
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 143/522 (27%), Positives = 208/522 (39%), Gaps = 117/522 (22%)
Query: 63 ASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQ 121
AE GE + +DW +WYP+ D+ P G TV +V++ D N + +
Sbjct: 68 VDAESEPGEER---FDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFD 124
Query: 122 DRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTY 177
D CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P D + ACV +
Sbjct: 125 DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVF 184
Query: 178 EVKESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSI 227
V+W W PN D K P+ P F + + +LPY + I
Sbjct: 185 PSIVQNDVLWFW------PNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEI 238
Query: 228 LLENLMDPAHIPISH-------DRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEP 280
L ENLMDPAH+P +H + A RE +P+ V + GF +
Sbjct: 239 LTENLMDPAHVPYAHYGIMGRLPKNREKADREGGKPIDIVVKDFNINGFIANQDMGSSQ- 297
Query: 281 LPNFLRFEAPCV-----------LQNNRE-----------LVDSKTGEKHYFTGLFLCRP 318
F APCV + +NR+ V T +K +F+C P
Sbjct: 298 ------FFAPCVYCTSFSIPSKKINSNRQDSGALLSGENNAVARNTSQKKAML-IFMCIP 350
Query: 319 TGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKET----- 373
G GKS LI + ++ P+W FH + + + D+ L + ++
Sbjct: 351 VGPGKSRLIFVSLRNFAVSIDRIIPRWIFHLGQNLILDSDLYLLHVEERKILDVGPSNWQ 410
Query: 374 ----VPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGL 429
VPTK SD V +R+W+++ G ++ LP
Sbjct: 411 KACFVPTK--------SDAKVVAFRRWLNRYSDSQVDWRGKFSVILP------------- 449
Query: 430 VAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTV- 488
SP+K L +RY+ HV++C C K N+L VV +++
Sbjct: 450 ------PSPSKE--------QLMDRYWSHVVNCSSCKVAYKGL----NALEVVLQVISIA 491
Query: 489 -LAILASGRQ------WKAFCLASASLCLAGVYACSTAIAMN 523
L I A+ +Q + L A C A S I N
Sbjct: 492 SLGIFAATKQSFVSGAARVLMLVMAIFCFASSRWLSHFIYKN 533
>gi|425444769|ref|ZP_18824812.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9443]
gi|389735432|emb|CCI01073.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9443]
Length = 460
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 167/345 (48%), Gaps = 23/345 (6%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-ELRCYQDRCPHRL 128
G + +D + WYP+Y KD+ P T+ ++ +V++ D N E R ++D+CPHRL
Sbjct: 11 GGTDIDRFDCRQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRL 70
Query: 129 AKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGV 185
A LSEG+L + G LEC YHGW F G G C IPQ P + A R ACVR++ QG+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGL 130
Query: 186 VWVWMSQKTPPNPDKLPWFENFARPG--FQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
++V+ +P E G + + T +LPY L+EN++D +HIP +H
Sbjct: 131 LFVYAGNPENAPLTAIPIIEAMEEDGDAWICLDTFRDLPYSAVTLIENIIDSSHIPYTHH 190
Query: 244 RTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVD 301
T R +A P+ E+ E +GF G W G K + + F P ++ + +L
Sbjct: 191 LT--IGNRANAAPMELEIIESNRQGFKGIWPEGPRKGQLGQQYSNFIVPGLIYH--DLTS 246
Query: 302 SKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQ 357
K G + P QG+ L RF S L K F P WY H N + + E
Sbjct: 247 EKFGRT---LTVVYATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILED 303
Query: 358 DMGFLSSQNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDK 399
D FL Q L + ++ YL + +D V EYR W+++
Sbjct: 304 DQIFLYYQERYLQAQGGSQNFSQACYLPTK-ADLLVFEYRNWVNQ 347
>gi|443326458|ref|ZP_21055111.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
gi|442793912|gb|ELS03346.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
Length = 435
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 196/436 (44%), Gaps = 62/436 (14%)
Query: 74 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLS 132
++ +++ + WYPL +D+ PL T+ +V++K + + + + DRCPHRLA LS
Sbjct: 1 MSSFNFFQHWYPLVPIEDINPQKPLPATLLGIPLVIWKPSSSQTYQVFLDRCPHRLAPLS 60
Query: 133 EGQLID--GRLECLYHGWQFEGEGKCVKIPQLPAD-----AKIPRSACVRTYEVKESQGV 185
EG++ D L C YHGWQFE +G C +IPQ AD AK ++ C + ++ +
Sbjct: 61 EGRIDDKTDNLMCSYHGWQFETKGNCTRIPQ--ADNPELIAKKSQNFCATVFPCRQENDL 118
Query: 186 VWVWMSQKTPPNP--DKLPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+WVWM +P LP A GF S + +L YD L+EN+ DP+H+P +H
Sbjct: 119 LWVWMDASSPEIAAITALPLSPQIDASKGFVWSSMVRDLEYDWQTLVENVADPSHVPFAH 178
Query: 243 DRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDS 302
R+ A P+ ++ R + D+P + FE PC L+ D
Sbjct: 179 HGIQ--GNRDRAHPIPLDII----RSEIDLIEAKVDKPFKTTITFEPPCRLEYALTFGDE 232
Query: 303 --KTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH-QNASKVFEQDM 359
K G Y C P GKS ++ +F + L KL P+W+ H QN + + + DM
Sbjct: 233 IKKIGLITY------CIPVSPGKSRIVAQFSRNFATKLHKLTPRWWDHIQNRNLILDGDM 286
Query: 360 GFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVP 419
L Q L K Y S+D V E+R W D+ + K+P
Sbjct: 287 VLLHQQESFLQHTN--WKTAYKMPTSADRLVIEFRSWFDRYCNA-------------KLP 331
Query: 420 AVVEHAPAGLVAGVSASSPAKGAIGTMHAPN--LANRYFRHVIHCKGCSSVIKAFSTWKN 477
VE P T+ P L +RY +H HC C ++++ W+
Sbjct: 332 WAVESQPR----------------PTLDKPREILLDRYHQHTQHCSSCRNILRTIQLWQW 375
Query: 478 SLSVVAAALT-VLAIL 492
L + +T ++A+L
Sbjct: 376 ILVIYFIVVTSIVAVL 391
>gi|172036878|ref|YP_001803379.1| cell death suppressor protein [Cyanothece sp. ATCC 51142]
gi|354554681|ref|ZP_08973985.1| Pheophorbide a oxygenase [Cyanothece sp. ATCC 51472]
gi|171698332|gb|ACB51313.1| putative Rieske [2Fe-2S] domain-containing cell death suppressor
protein [Cyanothece sp. ATCC 51142]
gi|353553490|gb|EHC22882.1| Pheophorbide a oxygenase [Cyanothece sp. ATCC 51472]
Length = 465
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 196/425 (46%), Gaps = 55/425 (12%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRC-YQDRCPHRLAKLSEGQ 135
+DW E WYP++ +D+ P T+ ++ IV++ D N C + D+CPHRLA LS+G+
Sbjct: 24 FDWQEVWYPVHYIEDLDKTKPTSFTLLEKNIVIWWDENNSQWCVFDDQCPHRLAPLSQGR 83
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWM-- 190
+ + G LEC YHGW F G+G C IPQ + K +S A V+TY K +QG+++V+
Sbjct: 84 INESGCLECPYHGWAFSGQGNCEVIPQQKPEGKAEQSPRASVKTYPTKVAQGLLFVYAGK 143
Query: 191 SQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAK 250
++ P P L + + ++T ++PYD L+EN++D +HIP +H ++
Sbjct: 144 TENAPKTPIPLVDVLDEKSDEWVCINTFRDIPYDALTLMENVLDSSHIPYTHHKS--VGN 201
Query: 251 REDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH 308
R + P+ EV E GF G W G K F AP ++ + +L + G
Sbjct: 202 RSNVSPVDLEVVESGKWGFKGVWEEGPRKGTLGKQTTYFFAPGMMYH--DLTSKQFGRT- 258
Query: 309 YFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGFLSS 364
+ P G+GK L RF SP+ K F P+WY H + V E D FL
Sbjct: 259 --LTVVYATPIGKGKCRLFARFPFKFSSPIPKFFINLTPRWYSHIGQNGVLEDDQIFLHY 316
Query: 365 QNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAV 421
Q L ++ +K YL + +D +V + W+++ + PK
Sbjct: 317 QERYLEEKGGSPNVSKAFYLPTK-ADLFVFQLHSWINQYQAEL----------FPK---- 361
Query: 422 VEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSV 481
+ SPA + + L +RY H HC C + +K K +++
Sbjct: 362 ------------QSLSPA------LSSETLLDRYHSHTKHCSSCRTALKNLQRIKIGVAI 403
Query: 482 VAAAL 486
+ +
Sbjct: 404 ATSVI 408
>gi|15451611|gb|AAK98735.1|AC090485_14 Putative cell death suppressor protein [Oryza sativa Japonica
Group]
Length = 515
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 137/521 (26%), Positives = 240/521 (46%), Gaps = 88/521 (16%)
Query: 24 PTTNVIISLNKTPKSRKCHAVTDRSSTSTVG------DHKVLVG-----PASAEERRGER 72
PT ++++S P SR+ ++ S++ + D ++ V P A++ GE
Sbjct: 3 PTASLLLSPRPLPASRRVPSLPALSASGRLRLRRARADTRLRVAAPPSVPGEADQAPGET 62
Query: 73 QVA------DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQDRCP 125
+ + + W + WYP+ L +D+ P + ++ +V++KD +GE DRCP
Sbjct: 63 EPSTSSADEKFVWRDHWYPVSLVEDLDPSVPTPFQLLNRDLVIWKDPKSGEWVALDDRCP 122
Query: 126 HRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLP---ADAKIPRS--ACVRTYEV 179
HRLA LSEG++ + G L+C YHGW F+G G C +IPQ +AK RS AC +
Sbjct: 123 HRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTRIPQAAPEGPEAKAVRSPKACAIKFPT 182
Query: 180 KESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIP 239
SQG+++VW P+ + LP + F P F V+ +L Y + L+EN+ DP+HI
Sbjct: 183 LVSQGLLFVW------PDENGLP--KEFEDPAFSTVTIQRDLYYGYDTLMENVSDPSHIE 234
Query: 240 ISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL 299
+H + T +R+ A+PL F++ G++ G P + F APC N E
Sbjct: 235 FAHHKV--TGRRDRARPLPFKMESSGAWGYS---GSNSGNPRIS-ATFVAPCYALNKIE- 287
Query: 300 VDSKT---GEKHYFTGLFLCR---PTGQGKSMLIV-------RFGATKRSPLAKLFPKWY 346
+D+K G++ + +++C P GK+ IV +F ++ +L P+WY
Sbjct: 288 IDTKLPIFGDQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSMPGKA-WWQLVPRWY 344
Query: 347 FHQNASKVFEQDMGFLSSQNEVLM----KETVPTKELYLNL----RSSDTWVAEYRKWMD 398
H ++ V++ DM L Q ++ + + + + Y + +D +V +R W+
Sbjct: 345 EHWTSNLVYDGDMIVLQGQEKIFLSASKESSADINQQYTKITFTPTQADRFVLAFRAWLR 404
Query: 399 KVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRH 458
K G+ P FG+ + + +P+ V + + +RY +H
Sbjct: 405 KFGNSQPDWFGNPSQEV--LPSTV-----------------------LSKREMLDRYEQH 439
Query: 459 VIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWK 499
+ C C AF T + A A + + Q++
Sbjct: 440 TLKCSSCKGAYNAFQTLQKVFMGATVAFCATAGIPADVQFR 480
>gi|414864800|tpg|DAA43357.1| TPA: lethal leaf spot1 [Zea mays]
Length = 520
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 134/480 (27%), Positives = 221/480 (46%), Gaps = 80/480 (16%)
Query: 50 TSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL 109
TS G+ P+++ GE+ + W + WYP+ L +D+ P + ++ +V+
Sbjct: 44 TSVPGEAAEQAEPSTSAPESGEK----FSWRDHWYPVSLVEDLDPSRPTPFQLLNRDLVI 99
Query: 110 YKD-GNGELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQ-LPA-- 164
+K+ +GE DRCPHRLA LSEG++ + G L+C YHGW F+G G C KIPQ +P
Sbjct: 100 WKEPKSGEWVALDDRCPHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTKIPQAMPEGP 159
Query: 165 DAKIPRS--ACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVST 217
+A+ RS AC + SQG+++VW + P LP + F P F V+
Sbjct: 160 EARAVRSPKACAIKFPTLVSQGLLFVWPDENGWEKAAATKPPMLP--KEFEDPAFSTVTI 217
Query: 218 IHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEK 277
+L Y + L+EN+ DP+HI +H + T +R+ A+PL F + G++G
Sbjct: 218 QRDLFYGYDTLMENVSDPSHIEFAHHKV--TGRRDRARPLTFRMESSGAWGYSG-----A 270
Query: 278 DEPLPNFL-RFEAPCVLQNNRELVDSKT---GEKHYFTGLFLCR---PTGQGKSMLIV-- 328
+ P FEAPC N E +D+K G++ + +++C P GK+ IV
Sbjct: 271 NSGNPRITATFEAPCYALNKIE-IDTKLPIFGDQKWV--IWICSFNIPMAPGKTRSIVCS 327
Query: 329 -----RFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTK------ 377
+F ++ +L P+WY H ++ V++ DM L Q ++ + T +
Sbjct: 328 ARNFFQFTMPGKA-WWQLVPRWYEHWTSNLVYDGDMIVLQGQEKIFLAATKESSTDINQQ 386
Query: 378 --ELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSA 435
++ +D +V +R W+ K G+ P FG+ T +P+ V
Sbjct: 387 YTKITFTPTQADRFVLAFRTWLRKFGNSQPEWFGNPTQE--ALPSTV------------- 431
Query: 436 SSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASG 495
+ + +RY +H + C C AF +L V TV+ A+G
Sbjct: 432 ----------LSKREMLDRYEQHTLKCSSCKGAYNAF----QNLQKVFMGATVVCCAAAG 477
>gi|326490297|dbj|BAJ84812.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514506|dbj|BAJ96240.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 536
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 216/486 (44%), Gaps = 78/486 (16%)
Query: 62 PASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCY 120
P S EER + W + WYP+ L +D+ P + ++ +V++ D N G+
Sbjct: 76 PGSPEER--------FVWRDHWYPVSLVEDLDPRVPTPFQLLNRDLVIWNDPNSGDWVAL 127
Query: 121 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACV 174
DRCPHRLA LSEG++ + G L+C YHGW F+G G C +IPQ A+ R+ AC
Sbjct: 128 DDRCPHRLAPLSEGRIDETGGLQCSYHGWSFDGSGACTRIPQAAAEGPEARAVRSPRACA 187
Query: 175 RTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 229
+ SQG+++VW + P LP + F P F V+ +L Y + L+
Sbjct: 188 TKFPTLLSQGLLFVWPDENGWDKAKATKPPMLP--KEFDDPAFSTVTIQRDLFYGYDTLM 245
Query: 230 ENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEA 289
EN+ DP+HI +H + T +R+ A+PL F++ G++G P FEA
Sbjct: 246 ENVSDPSHIEFAHHKV--TGRRDRAKPLPFKMESSGAWGYSG---ANTGNPRIT-ATFEA 299
Query: 290 PCVLQNNRELVDSK---TGEKHYFTGLFLCR---PTGQGKSMLIV-------RFGATKRS 336
PC N E +D+K G++ + +++C P GK+ IV +F ++
Sbjct: 300 PCYALNKIE-IDTKLPIVGDQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFTMPGKA 356
Query: 337 PLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLM----KETVPTKELYLNLR----SSDT 388
+L P+WY H ++ V++ DM L Q +V + + + + Y L +D
Sbjct: 357 -WWQLVPRWYEHWTSNLVYDGDMIVLQGQEKVFLSASKESSADVNQQYTKLTFTPTQADR 415
Query: 389 WVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHA 448
+V +R W+ K G+ P +G T +P+ V +
Sbjct: 416 FVLAFRAWLRKFGNSQPDWYGSPTQD--ALPSTV-----------------------LSK 450
Query: 449 PNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASL 508
+ +RY +H + C C KAF T + V + + + Q + A A +
Sbjct: 451 REMLDRYEQHTLKCSSCRGAHKAFQTLQKVFMGATVVFGVTSGIPADVQLRILLGAGALI 510
Query: 509 CLAGVY 514
A Y
Sbjct: 511 SAALAY 516
>gi|425442274|ref|ZP_18822528.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9717]
gi|389716788|emb|CCH99015.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9717]
Length = 460
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 171/349 (48%), Gaps = 31/349 (8%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-ELRCYQDRCPHRL 128
G + +D + WYP+Y KD+ P T+ ++ +V++ D N E R ++D+CPHRL
Sbjct: 11 GGTDIDRFDCRQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRL 70
Query: 129 AKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGV 185
A LSEG+L + G LEC YHGW F G G C IPQ P + A R ACVR++ QG+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGL 130
Query: 186 VWVWMSQKTPPNPDKLPWFENFARPGFQD------VSTIHELPYDHSILLENLMDPAHIP 239
++V+ +P E P +D + T +LPY L+EN++D +H+P
Sbjct: 131 LFVYAGNPENAPLTAIPIIE----PMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVP 186
Query: 240 ISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNR 297
+H T R +A P+ E+ E +GF G W G K + + F AP + +
Sbjct: 187 YTHHLT--IGNRANAAPMELEIIESNRQGFKGIWPEGPRKGKLGQQYSNFIAPGFIYH-- 242
Query: 298 ELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASK 353
+L K G T ++ P QG+ L RF S L K F P WY H N +
Sbjct: 243 DLTSEKFGRT--LTAVY-ATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNA 299
Query: 354 VFEQDMGFLSSQNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDK 399
+ E D FL Q L + ++ YL + +D +V EYR W+++
Sbjct: 300 ILEDDQIFLYYQERYLQAQGDSRNFSQACYLPTK-ADLFVFEYRNWVNQ 347
>gi|166365800|ref|YP_001658073.1| pheophorbide a oxygenase [Microcystis aeruginosa NIES-843]
gi|166088173|dbj|BAG02881.1| pheophorbide a oxygenase [Microcystis aeruginosa NIES-843]
Length = 460
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 171/349 (48%), Gaps = 31/349 (8%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-ELRCYQDRCPHRL 128
G + +D + WYP+Y KD+ P T+ ++ +V++ D N E R ++D+CPHRL
Sbjct: 11 GGTDIDRFDCRQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRL 70
Query: 129 AKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGV 185
A LSEG+L + G LEC YHGW F G G C IPQ P + A R ACVR++ QG+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGL 130
Query: 186 VWVWMSQKTPPNPDKLPWFENFARPGFQD------VSTIHELPYDHSILLENLMDPAHIP 239
++V+ +P E P +D + T +LPY L+EN++D +H+P
Sbjct: 131 LFVYAGNPENAPLTAIPIIE----PMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVP 186
Query: 240 ISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNR 297
+H T R +A P+ E+ E +GF G W G K + + F AP + +
Sbjct: 187 YTHHLT--IGNRANAAPMELEIIESNRQGFKGIWPEGPRKGKLGQQYSNFIAPGFIYH-- 242
Query: 298 ELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASK 353
+L K G T ++ P QG+ L RF S L K F P WY H N +
Sbjct: 243 DLTSEKFGRT--LTAVY-ATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNA 299
Query: 354 VFEQDMGFLSSQNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDK 399
+ E D FL Q L + ++ YL + +D +V EYR W+++
Sbjct: 300 ILEDDQIFLYYQERYLQAQGDSRNFSQACYLPTK-ADLFVFEYRNWVNQ 347
>gi|115450715|ref|NP_001048958.1| Os03g0146400 [Oryza sativa Japonica Group]
gi|113547429|dbj|BAF10872.1| Os03g0146400 [Oryza sativa Japonica Group]
Length = 529
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 137/526 (26%), Positives = 239/526 (45%), Gaps = 87/526 (16%)
Query: 24 PTTNVIISLNKTPKSRKCHAVTDRSSTSTVG------DHKVLVG-----PASAEERRGER 72
PT ++++S P SR+ ++ S++ + D ++ V P A++ GE
Sbjct: 6 PTASLLLSPRPLPASRRVPSLPALSASGRLRLRRARADTRLRVAAPPSVPGEADQAPGET 65
Query: 73 QVA------DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQDRCP 125
+ + + W + WYP+ L +D+ P + ++ +V++KD +GE DRCP
Sbjct: 66 EPSTSSADEKFVWRDHWYPVSLVEDLDPSVPTPFQLLNRDLVIWKDPKSGEWVALDDRCP 125
Query: 126 HRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLP---ADAKIPRS--ACVRTYEV 179
HRLA LSEG++ + G L+C YHGW F+G G C +IPQ +AK RS AC +
Sbjct: 126 HRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTRIPQAAPEGPEAKAVRSPKACAIKFPT 185
Query: 180 KESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMD 234
SQG+++VW + T P LP + F P F V+ +L Y + L+EN+ D
Sbjct: 186 LVSQGLLFVWPDENGWEKATATKPPMLP--KEFEDPAFSTVTIQRDLYYGYDTLMENVSD 243
Query: 235 PAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQ 294
P+HI +H + T +R+ A+PL F++ G++ G P + F APC
Sbjct: 244 PSHIEFAHHKV--TGRRDRARPLPFKMESSGAWGYS---GSNSGNPRIS-ATFVAPCYAL 297
Query: 295 NNRELVDSKT---GEKHYFTGLFLCR---PTGQGKSMLIV-------RFGATKRSPLAKL 341
N E +D+K G++ + +++C P GK+ IV +F ++ +L
Sbjct: 298 NKIE-IDTKLPIFGDQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSMPGKA-WWQL 353
Query: 342 FPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTK--------ELYLNLRSSDTWVAEY 393
P+WY H ++ V++ DM L Q ++ + + + ++ +D +V +
Sbjct: 354 VPRWYEHWTSNLVYDGDMIVLQGQEKIFLSASKESSADINQQYTKITFTPTQADRFVLAF 413
Query: 394 RKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLAN 453
R W+ K G+ P FG+ + + +P+ V + + +
Sbjct: 414 RAWLRKFGNSQPDWFGNPSQEV--LPSTV-----------------------LSKREMLD 448
Query: 454 RYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWK 499
RY +H + C C AF T + A A + + Q++
Sbjct: 449 RYEQHTLKCSSCKGAYNAFQTLQKVFMGATVAFCATAGIPADVQFR 494
>gi|113477251|ref|YP_723312.1| pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
gi|110168299|gb|ABG52839.1| Pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
Length = 443
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 132/457 (28%), Positives = 206/457 (45%), Gaps = 52/457 (11%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSE 133
++++ + WYPL +D+ + P+ +T+ +V++K + + + D CPHRLA LSE
Sbjct: 3 TEFNFFQHWYPLSPVEDLDPEIPVSITLLGMGLVIWKPRYSQNYQVFLDVCPHRLAPLSE 62
Query: 134 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWV 188
G++ + G L C YHGWQF EG C IPQ I ++ CV + V++ ++WV
Sbjct: 63 GRVDEKTGNLMCSYHGWQFNSEGICTDIPQAENQEIIEKNRQNFCVTSLPVRQENDLLWV 122
Query: 189 WMSQKTP--PNPDKLPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
W +KT LP A GF S + +L YD L+EN+ DP+H+P SH
Sbjct: 123 WPDRKTADLAASTPLPLSPQIDAEKGFVWSSYVRDLEYDWETLVENVADPSHVPFSHHGV 182
Query: 246 DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
R A+P+ E+ + T + LP + FE PC L+ E+ K G
Sbjct: 183 Q--GNRNKARPIVMEILQSTINVIKVSISRG----LPTIITFEPPCRLE--YEISIGKDG 234
Query: 306 EKHYFTGLF-LCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH-QNASKVFEQDMGFLS 363
+K GL C P GKS ++ +F + +L P+W+ H QN + V + DM L+
Sbjct: 235 KK---IGLVTYCLPVSPGKSRIVAQFPRNFAKIIHRLTPRWWDHIQNRNLVLDGDMVLLN 291
Query: 364 SQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKWMDKVGHG-MPYHFGHSTISLPKVPA 420
Q +L ++ K Y S+D V E+R W DK HG +P+
Sbjct: 292 QQEYLLQQKQSSKSWKTAYQLPTSADRLVIEFRNWFDKYSHGQLPW-------------- 337
Query: 421 VVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSL- 479
+ V S + H +L NRY +H HC C +K + L
Sbjct: 338 ----------SEVGVSDSNNSLVNNNHG-SLLNRYQQHTQHCSSCRQALKNLKRLQIFLI 386
Query: 480 SVVAAALTVLAILASGRQWK-AFCLASASLCLAGVYA 515
+ ++ +AIL + K L ++ G+YA
Sbjct: 387 TYFVVTVSGVAILPDNLRIKIGLPLIITAVLGMGIYA 423
>gi|108706168|gb|ABF93963.1| Pheophorbide a oxygenase, chloroplast precursor, putative,
expressed [Oryza sativa Japonica Group]
Length = 654
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 137/526 (26%), Positives = 239/526 (45%), Gaps = 87/526 (16%)
Query: 24 PTTNVIISLNKTPKSRKCHAVTDRSSTSTVG------DHKVLVG-----PASAEERRGER 72
PT ++++S P SR+ ++ S++ + D ++ V P A++ GE
Sbjct: 131 PTASLLLSPRPLPASRRVPSLPALSASGRLRLRRARADTRLRVAAPPSVPGEADQAPGET 190
Query: 73 QVA------DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQDRCP 125
+ + + W + WYP+ L +D+ P + ++ +V++KD +GE DRCP
Sbjct: 191 EPSTSSADEKFVWRDHWYPVSLVEDLDPSVPTPFQLLNRDLVIWKDPKSGEWVALDDRCP 250
Query: 126 HRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLP---ADAKIPRS--ACVRTYEV 179
HRLA LSEG++ + G L+C YHGW F+G G C +IPQ +AK RS AC +
Sbjct: 251 HRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTRIPQAAPEGPEAKAVRSPKACAIKFPT 310
Query: 180 KESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMD 234
SQG+++VW + T P LP + F P F V+ +L Y + L+EN+ D
Sbjct: 311 LVSQGLLFVWPDENGWEKATATKPPMLP--KEFEDPAFSTVTIQRDLYYGYDTLMENVSD 368
Query: 235 PAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQ 294
P+HI +H + T +R+ A+PL F++ G++ G P + F APC
Sbjct: 369 PSHIEFAHHKV--TGRRDRARPLPFKMESSGAWGYS---GSNSGNPRIS-ATFVAPCYAL 422
Query: 295 NNRELVDSKT---GEKHYFTGLFLCR---PTGQGKSMLIV-------RFGATKRSPLAKL 341
N E +D+K G++ + +++C P GK+ IV +F ++ +L
Sbjct: 423 NKIE-IDTKLPIFGDQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSMPGKA-WWQL 478
Query: 342 FPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTK--------ELYLNLRSSDTWVAEY 393
P+WY H ++ V++ DM L Q ++ + + + ++ +D +V +
Sbjct: 479 VPRWYEHWTSNLVYDGDMIVLQGQEKIFLSASKESSADINQQYTKITFTPTQADRFVLAF 538
Query: 394 RKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLAN 453
R W+ K G+ P FG+ + + +P+ V + + +
Sbjct: 539 RAWLRKFGNSQPDWFGNPSQEV--LPSTV-----------------------LSKREMLD 573
Query: 454 RYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWK 499
RY +H + C C AF T + A A + + Q++
Sbjct: 574 RYEQHTLKCSSCKGAYNAFQTLQKVFMGATVAFCATAGIPADVQFR 619
>gi|425466450|ref|ZP_18845748.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9809]
gi|389831010|emb|CCI26578.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9809]
Length = 460
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 171/349 (48%), Gaps = 31/349 (8%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-ELRCYQDRCPHRL 128
G + +D + WYP+Y KD+ P T+ ++ +V++ D N E R ++D+CPHRL
Sbjct: 11 GGTDIDRFDCRQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRL 70
Query: 129 AKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGV 185
A LSEG+L + G LEC YHGW F G G C IPQ P + A R ACVR++ QG+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSFPTAIRQGL 130
Query: 186 VWVWMSQKTPPNPDKLPWFENFARPGFQD------VSTIHELPYDHSILLENLMDPAHIP 239
++V+ +P E P +D + T +LPY L+EN++D +H+P
Sbjct: 131 LFVYAGNPENAPLTAIPIIE----PMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVP 186
Query: 240 ISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNR 297
+H T R +A P+ E+ E +GF G W G K + + F AP ++ +
Sbjct: 187 YTHHLT--IGNRANAAPMELEIIESNRQGFKGIWPEGPRKGKLGQQYSNFIAPGLIYH-- 242
Query: 298 ELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASK 353
+L K G T ++ P QG+ L RF S L K F P WY H N +
Sbjct: 243 DLTSEKFGRT--LTAVY-ATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNA 299
Query: 354 VFEQDMGFLSSQNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDK 399
+ E D FL Q L + ++ YL + +D V EYR W+++
Sbjct: 300 ILEDDQIFLYYQERYLQAQGDSRNFSQACYLPTK-ADLLVFEYRNWVNQ 347
>gi|125542400|gb|EAY88539.1| hypothetical protein OsI_10012 [Oryza sativa Indica Group]
gi|222624188|gb|EEE58320.1| hypothetical protein OsJ_09401 [Oryza sativa Japonica Group]
Length = 526
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 138/526 (26%), Positives = 240/526 (45%), Gaps = 87/526 (16%)
Query: 24 PTTNVIISLNKTPKSRKCHAVTDRSSTSTVG------DHKVLVG-----PASAEERRGER 72
PT ++++S P SR+ ++ S++ + D ++ V P A++ GE
Sbjct: 3 PTASLLLSPRPLPASRRVPSLPALSASGRLRLRRARADTRLRVAAPPSVPGEADQAPGET 62
Query: 73 QVA------DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQDRCP 125
+ + + W + WYP+ L +D+ P + ++ +V++KD +GE DRCP
Sbjct: 63 EPSTSSADEKFVWRDHWYPVSLVEDLDPSVPTPFQLLNRDLVIWKDPKSGEWVALDDRCP 122
Query: 126 HRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLP---ADAKIPRS--ACVRTYEV 179
HRLA LSEG++ + G L+C YHGW F+G G C +IPQ +AK RS AC +
Sbjct: 123 HRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTRIPQAAPEGPEAKAVRSPKACAIKFPT 182
Query: 180 KESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMD 234
SQG+++VW + T P LP + F P F V+ +L Y + L+EN+ D
Sbjct: 183 LVSQGLLFVWPDENGWEKATATKPPMLP--KEFEDPAFSTVTIQRDLYYGYDTLMENVSD 240
Query: 235 PAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQ 294
P+HI +H + T +R+ A+PL F++ G++ G P + F APC
Sbjct: 241 PSHIEFAHHKV--TGRRDRARPLPFKMESSGAWGYS---GSNSGNPRIS-ATFVAPCYAL 294
Query: 295 NNRELVDSKT---GEKHYFTGLFLCR---PTGQGKSMLIV-------RFGATKRSPLAKL 341
N E +D+K G++ + +++C P GK+ IV +F ++ +L
Sbjct: 295 NKIE-IDTKLPIFGDQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSMPGKA-WWQL 350
Query: 342 FPKWYFHQNASKVFEQDMGFLSSQNEVLM----KETVPTKELYLNL----RSSDTWVAEY 393
P+WY H ++ V++ DM L Q ++ + + + + Y + +D +V +
Sbjct: 351 VPRWYEHWTSNLVYDGDMIVLQGQEKIFLSASKESSADINQQYTKITFTPTQADRFVLAF 410
Query: 394 RKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLAN 453
R W+ K G+ P FG+ + + +P+ V + + +
Sbjct: 411 RAWLRKFGNSQPDWFGNPSQEV--LPSTV-----------------------LSKREMLD 445
Query: 454 RYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWK 499
RY +H + C C AF T + A A + + Q++
Sbjct: 446 RYEQHTLKCSSCKGAYNAFQTLQKVFMGATVAFCATAGIPADVQFR 491
>gi|242042229|ref|XP_002468509.1| hypothetical protein SORBIDRAFT_01g047120 [Sorghum bicolor]
gi|241922363|gb|EER95507.1| hypothetical protein SORBIDRAFT_01g047120 [Sorghum bicolor]
Length = 524
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 219/482 (45%), Gaps = 82/482 (17%)
Query: 50 TSTVGDHKVLVGPASA--EERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQI 107
TS G+ P+++ E GE+ + W + WYP+ L +D+ P + ++ +
Sbjct: 46 TSVPGEAAEQAEPSTSAPESESGEK----FSWRDHWYPVSLVEDLDPSRPTPFQLLNRDL 101
Query: 108 VLYKD-GNGELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQ---- 161
V++K+ +GE DRCPHRLA LSEG++ + G L+C YHGW F+G G C +IPQ
Sbjct: 102 VIWKEPKSGEWVALDDRCPHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTRIPQAMPE 161
Query: 162 -LPADAKIPRSACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDV 215
L A A AC + SQG+++VW + T P LP + F P F V
Sbjct: 162 GLEARAVRSPKACAIKFPTLVSQGLLFVWPDENGWEKATATKPPMLP--KEFDDPAFSTV 219
Query: 216 STIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGK 275
+ +L Y + L+EN+ DP+HI +H + T +R+ A+PL F++ G++G
Sbjct: 220 TIQRDLFYGYDTLMENVSDPSHIEFAHHKV--TGRRDRAKPLTFKMESSGAWGYSG---- 273
Query: 276 EKDEPLPNFL-RFEAPCVLQNNRELVDSKT---GEKHYFTGLFLCR---PTGQGKSMLIV 328
+ P FEAPC N E +D+K G++ + +++C P GK+ IV
Sbjct: 274 -ANSGNPRITATFEAPCYALNKIE-IDTKLPIFGDQKWV--IWICSFNIPMAPGKTRSIV 329
Query: 329 -------RFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTK---- 377
+F ++ +L P+WY H ++ V++ DM L Q ++ + T T
Sbjct: 330 CSARNFFQFTMPGKA-WWQLVPRWYEHWTSNLVYDGDMIVLQGQEKIFLAATKETSTDVN 388
Query: 378 ----ELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGV 433
++ +D +V +R W+ K G+ P FG+ S +P+ V
Sbjct: 389 QQYTKITFTPTQADRFVLAFRAWLRKFGNSQPEWFGNP--SQEALPSTV----------- 435
Query: 434 SASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILA 493
+ + +RY +H + C C AF T L V TV+
Sbjct: 436 ------------LSKREMLDRYEQHTLKCSSCKGAYHAFQT----LQKVFMGATVVGCAT 479
Query: 494 SG 495
+G
Sbjct: 480 AG 481
>gi|414079743|ref|YP_007001167.1| pheophorbide a oxygenase [Anabaena sp. 90]
gi|413973022|gb|AFW97110.1| pheophorbide a oxygenase [Anabaena sp. 90]
Length = 469
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 201/452 (44%), Gaps = 61/452 (13%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQDRCPHRLAKLSEGQ 135
+ E WYP++ +D+ P T+ + IV++ D N + + D+CPHRLA LSEG+
Sbjct: 26 FQLAEAWYPVHYLQDLDKSKPTPFTLLGKDIVIWWDQKNSSWQVFIDQCPHRLAPLSEGR 85
Query: 136 LI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQ 192
+ DG LEC YHGW F G+G C KIPQ A K S ACV + E QG+++V+
Sbjct: 86 INEDGLLECPYHGWSFAGDGSCQKIPQQVAGGKAETSPRACVPSLPTTERQGLLFVYAGN 145
Query: 193 KTPPNPDKLPWFENF--ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAK 250
K+P E A G+ ++T ++PYD LLEN++DP+HI +H T
Sbjct: 146 PENAINTKVPVVEPIESAPEGWVIMNTFRDVPYDALTLLENILDPSHIAFTHHLT--VGN 203
Query: 251 REDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH 308
R +A PL E+ E GF G W G + + F AP ++ ++ EK
Sbjct: 204 RANAAPLELEIVESGKYGFEGIWKQGLKPGQSGKLSTTFIAPGLMWHD------INAEKG 257
Query: 309 YFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGFLSS 364
+ P +G+ +I RF +S + F P+WY H + V E D FL
Sbjct: 258 RILTVVYAVPIRKGECRIIARFPFKFKSQIPGFFIKIRPRWYVHIGQNGVLEDDQIFLHY 317
Query: 365 QNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAV 421
Q L + K YL + +DT+VAE RKW+++ HG + SLP +
Sbjct: 318 QERYLADKGGSANFNKAFYLATK-ADTFVAELRKWVNQY-HGETF----PGESLPPL--- 368
Query: 422 VEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSV 481
++ L RY H C C ++ L
Sbjct: 369 -----------------------LLNKEALLERYHSHTEKCASCRQALRRI----QQLKF 401
Query: 482 VAAALTVLAILASGRQWKAFCLASASLCLAGV 513
+ LT+LA+ +S AF + + S+ L V
Sbjct: 402 LCGVLTILALASS--PLLAFLVETKSIVLVMV 431
>gi|89077587|gb|ABD60317.1| chloroplast pheophorbide a oxygenase PaO1 [Brassica napus]
Length = 538
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 218/487 (44%), Gaps = 73/487 (14%)
Query: 66 EERRG---ERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQ 121
EE G E + +++ W + WYP+ L +D+ ++P + + +VL+ D N + +
Sbjct: 69 EEEHGGDKEEEGSEFKWRDHWYPVSLVEDLDPNSPTRFQLLGRDLVLWFDRNDQKWAAFD 128
Query: 122 DRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACV 174
D CPHRLA LSEG+L + G L+C YHGW F G G C +IPQ K PR AC
Sbjct: 129 DLCPHRLAPLSEGRLDENGHLQCSYHGWSFAGCGSCTRIPQAATSGPEARAVKSPR-ACA 187
Query: 175 RTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 229
+ SQG+++VW + P +LP ++F +P F V+ +L Y + L+
Sbjct: 188 IKFPTMVSQGLLFVWPDENGWDRANSIEPPRLP--DDFDKPEFSTVTIQRDLFYGYDTLM 245
Query: 230 ENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEA 289
EN+ DP+HI +H + T +R+ A+PL F+V GF G D+ +F A
Sbjct: 246 ENVSDPSHIDFAHHKV--TGRRDRAKPLPFKVESSGPWGFQG----ANDDGPKITAKFVA 299
Query: 290 PCVLQNNRELVDSK---TGEKHYFTGLFLCR---PTGQGKSMLIV-----RFGATKRSPL 338
PC N E +D+K G + + +++C P GK+ IV F + P
Sbjct: 300 PCYSLNKIE-IDAKLPIVGNQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPA 356
Query: 339 -AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLR---------SSDT 388
++ P+WY H ++ V++ DM L Q +V + +++ + + +N + +D
Sbjct: 357 WWQVVPRWYEHWTSNLVYDGDMIVLQGQEKVFLSKSMESPDYDVNKQYTKLTFTPTQADR 416
Query: 389 WVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHA 448
+V +R W+ + G P FG + + P +P+ V +
Sbjct: 417 FVLAFRNWLRRYGKSQPEWFGSTAANQP-LPSTV-----------------------LTK 452
Query: 449 PNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASL 508
+ +R+ +H C C F K L L A + S Q + A +
Sbjct: 453 REMLDRFEQHTQVCSSCKGAYNGFQIVKKFLVGTTVLLAATAGVPSDVQIRLVLAGLALI 512
Query: 509 CLAGVYA 515
A YA
Sbjct: 513 SAASAYA 519
>gi|390438979|ref|ZP_10227404.1| Pheophorbide a oxygenase [Microcystis sp. T1-4]
gi|389837609|emb|CCI31528.1| Pheophorbide a oxygenase [Microcystis sp. T1-4]
Length = 459
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 168/345 (48%), Gaps = 23/345 (6%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-ELRCYQDRCPHRL 128
G + +D + WYP+Y KD+ P T+ ++ +V++ D N E R ++D+CPHRL
Sbjct: 11 GGTDIDRFDCRQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRL 70
Query: 129 AKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGV 185
A LSEG+L + G LEC YHGW F G G C IPQ P + A R ACVR+ QG+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSLPTAIRQGL 130
Query: 186 VWVWMSQKTPPNPDKLPWFENFAR--PGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
++V+ +P E + + T +LPY L+EN++D +H+P +H
Sbjct: 131 LFVYAGNPENAPLTAIPIIEPLEEDADAWICLDTFRDLPYSAVTLIENIIDSSHVPYTHH 190
Query: 244 RTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVD 301
T R +A P+ E+ E +GF G W G K + + F AP ++ + +L
Sbjct: 191 LT--IGNRANAAPMELEIIESNRQGFKGIWPEGPRKGQLGQQYSNFIAPGLIYH--DLTS 246
Query: 302 SKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQ 357
K G T ++ P QG+ L RF S L K F P WY H N + + E
Sbjct: 247 EKFGRT--LTAVY-ATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQNAILED 303
Query: 358 DMGFLSSQNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDK 399
D FL Q L ++ YL + +D +V EYR W+++
Sbjct: 304 DQIFLYYQERYLQARGDSRNFSQACYLPTK-ADLFVFEYRNWVNQ 347
>gi|443323888|ref|ZP_21052865.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
gi|442796320|gb|ELS05613.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
Length = 469
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 140/473 (29%), Positives = 210/473 (44%), Gaps = 64/473 (13%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRL 128
G + +D E WYP+ D+ P T+ + +VL+ D + R + D+CPHRL
Sbjct: 13 GGTEATSFDVKEAWYPVAYLDDLDKTKPTTFTLLEIDLVLWWDAKSQSWRAFVDQCPHRL 72
Query: 129 AKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA--DAKIPRSACVRTYEVKESQGV 185
A LSEG++ + G LEC YHGW F G G C IPQ A A + AC Y + +QG+
Sbjct: 73 ASLSEGRINEQGLLECPYHGWSFSGSGNCEDIPQQSATNQANTSKRACATAYPTQTAQGL 132
Query: 186 VWVWMSQKTPPNPDKLPWFENFARPGFQDV--STIHELPYDHSILLENLMDPAHIPISHD 243
++V+ + N +P E + V +LPYD LLEN++D +H+P +H
Sbjct: 133 LFVYPGKAAMANQVPVPIVEPIEESPEEWVCLDLFRDLPYDALTLLENVLDVSHVPYTHH 192
Query: 244 RTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVD 301
+T +KR +A P+ VT+ GF G W G K E + F AP ++ + +L
Sbjct: 193 KT--VSKRSNAAPVDLAVTQSDKNGFQGVWEEGPRKGELGTQYTSFIAPSLMWH--DLTS 248
Query: 302 SKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPL----AKLFPKWYFHQNASKVFEQ 357
+ G + P +G+ L RF SP+ KL P+WY H N V E
Sbjct: 249 KQFGRT---LTVVYATPIRKGQCRLFARFPFKFASPIPAFFIKLTPRWYSHVNQHTVLED 305
Query: 358 DMGFLSSQNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTIS 414
D FL Q L + +K YL + +D +V+E R+W++ + H P+
Sbjct: 306 DQIFLHHQERYLEAKGGSDNYSKAFYLATK-ADLYVSELRQWVN-LYHADPF----PNEK 359
Query: 415 LPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFST 474
LP PA+++ L RY H +C C +K
Sbjct: 360 LP--PALLKE-------------------------QLLERYHSHTKNCASCRQALKNIQK 392
Query: 475 WKNSLSVVAA-ALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTN 526
K + +V A +L++ IL + ASAS + A IAM TT+
Sbjct: 393 LKLASGLVGAISLSLSPIL-------SVVFASAS-AITQRSASLWLIAMGTTS 437
>gi|422302482|ref|ZP_16389845.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9806]
gi|389788306|emb|CCI16148.1| Pheophorbide a oxygenase [Microcystis aeruginosa PCC 9806]
Length = 460
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 171/350 (48%), Gaps = 33/350 (9%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-ELRCYQDRCPHRL 128
G + +D + WYP+Y KD+ P T+ ++ +V++ D N E R ++D+CPHRL
Sbjct: 11 GGTDIDRFDCRQVWYPIYYVKDLDKKQPQRFTLLEEDLVIWWDKNQQEWRVFEDKCPHRL 70
Query: 129 AKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGV 185
A LSEG+L + G LEC YHGW F G G C IPQ P + A R ACVR+ QG+
Sbjct: 71 APLSEGRLNESGHLECPYHGWSFSGGGNCEFIPQQPENSQANTSRRACVRSLPTAIRQGL 130
Query: 186 VWVWMSQKTPPNPDKLPWFE-NFARPGFQD------VSTIHELPYDHSILLENLMDPAHI 238
++V+ NP+ P P +D + T +LPY L+EN++D +H+
Sbjct: 131 LFVYAG-----NPENAPLTAIPIIEPMEEDADAWICLDTFRDLPYSAVTLIENIIDSSHV 185
Query: 239 PISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNN 296
P +H T R +A P+ E+ E +GF G W G K + + F AP ++ +
Sbjct: 186 PYTHHLT--IGNRANAAPMELEIIESNRQGFKGIWPEGPRKGQLGQQYSNFIAPGLIYH- 242
Query: 297 RELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNAS 352
+L K G T ++ P QG+ L RF S L K F P WY H N +
Sbjct: 243 -DLTSEKFGRT--LTAVY-ATPIRQGECRLFARFPFKFNSKLPKFFIKLTPTWYSHINQN 298
Query: 353 KVFEQDMGFLSSQNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDK 399
+ E D FL Q L + ++ YL + +D V EYR W+++
Sbjct: 299 AILEDDQIFLYYQERYLQAQGDSRNFSQACYLPTK-ADLLVFEYRNWVNQ 347
>gi|297815634|ref|XP_002875700.1| hypothetical protein ARALYDRAFT_905628 [Arabidopsis lyrata subsp.
lyrata]
gi|297321538|gb|EFH51959.1| hypothetical protein ARALYDRAFT_905628 [Arabidopsis lyrata subsp.
lyrata]
Length = 537
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 141/506 (27%), Positives = 227/506 (44%), Gaps = 82/506 (16%)
Query: 65 AEERRGERQV--------ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE 116
AEE+R E + +++ W + WYP+ L +D+ + P + + +VL+ D N +
Sbjct: 62 AEEKRIEEEFGGDTEEEESEFKWRDHWYPVSLVEDLDPNVPTRFQLLGRDLVLWFDRNDQ 121
Query: 117 -LRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA------KI 168
+ D CPHRLA LSEG+L + G L+C YHGW F G G C +IPQ K
Sbjct: 122 KWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFSGCGSCTRIPQAATSGPEARAVKS 181
Query: 169 PRSACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPY 223
PR AC + SQG+++VW + P +LP ++F RP F V+ +L Y
Sbjct: 182 PR-ACAIKFPTMVSQGLLFVWPDENGWDRANSIEPPRLP--DDFDRPEFSTVTIQRDLFY 238
Query: 224 DHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPN 283
+ L+EN+ DP+HI +H + T +R+ A+PL F+V GF G D P
Sbjct: 239 GYDTLMENVSDPSHIDFAHHKV--TGRRDRAKPLPFKVESSGPWGFQ---GANDDNPRIT 293
Query: 284 FLRFEAPCVLQNNRELVDSKT---GEKHYFTGLFLCR---PTGQGKSMLIV-----RFGA 332
+F APC N E +D+K G + + +++C P GK+ IV F
Sbjct: 294 -AKFVAPCYSLNKIE-IDAKLPIFGNQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQF 349
Query: 333 TKRSPL-AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLR------- 384
+ P ++ P+WY H ++ V++ DM L Q +V + +++ + + +N +
Sbjct: 350 SVPGPAWWQVVPRWYEHWTSNLVYDGDMIVLQGQEKVFLSKSMESPDYDVNKQYTKLTFT 409
Query: 385 --SSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGA 442
+D +V +R W+ + G P FG +T + P +P+ V
Sbjct: 410 PTQADRFVLAFRNWLRRHGKSQPEWFGSTTANQP-LPSTV-------------------- 448
Query: 443 IGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFC 502
+ + +R+ +H C C +F K L A + S Q +
Sbjct: 449 ---LTKRQMLDRFEQHTQVCSSCKGAYNSFQILKKFLVGATVFCAATAGVPSDVQIR-LV 504
Query: 503 LASASLCLAGVYACSTAIAMNTTNFI 528
LA SL A A + A+ NF+
Sbjct: 505 LAGLSLISA---ASAYALHEQEKNFV 527
>gi|297799432|ref|XP_002867600.1| hypothetical protein ARALYDRAFT_492262 [Arabidopsis lyrata subsp.
lyrata]
gi|297313436|gb|EFH43859.1| hypothetical protein ARALYDRAFT_492262 [Arabidopsis lyrata subsp.
lyrata]
Length = 521
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 206/487 (42%), Gaps = 88/487 (18%)
Query: 69 RGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHR 127
R E +DW WYP+ D+ P G TV +V++ D N + + D CPHR
Sbjct: 66 RFESGSDKFDWYANWYPVMPICDLDKKVPHGKTVMGIDLVVWWDRNEKQWKVMDDTCPHR 125
Query: 128 LAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKESQ 183
LA LS+G++ GRL+C+YHGW F G G C IPQ P D + ACV Y
Sbjct: 126 LAPLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQH 185
Query: 184 GVVWVWMSQ----KTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIP 239
++W W + K +K P+ P F + ++PY + +L+ENLMDPAH+P
Sbjct: 186 EIIWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVP 245
Query: 240 ISHDRTDWTAKREDAQPLGFEVTERTDRGFAGR--WGKEKDEPLPNFLRFEAPCVLQNNR 297
+H + RE +PL V + +GF + WG + F APCV +++
Sbjct: 246 YAH----YGLMREGGKPLEINVKKLDSKGFFSKQEWG---------YSNFIAPCVYRSST 292
Query: 298 ELVDSKTGE-------------KHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPK 344
+ + + E K + +F+C P G+S LI F + K+ P+
Sbjct: 293 DPLPEQEHEYPAPAASDKAALSKRRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPR 352
Query: 345 WYFHQNASKVFEQDMGFLSSQNEVLMKET---------VPTKELYLNLRSSDTWVAEYRK 395
W FH + + + D+ L + +++ +PTK SD V +R+
Sbjct: 353 WVFHIGQNTILDSDLHLLHVEERKILERGPKNWQKACFIPTK--------SDANVVTFRR 404
Query: 396 WMDKVGHGMPYHFGHSTIS-LPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANR 454
W +K G S LP P + L +R
Sbjct: 405 WFNKYSEAQVDWRGKFDPSLLPPTPPREQ---------------------------LFDR 437
Query: 455 YFRHVIHCKGCSSVIKAFSTWKNSLSVV--AAALTVLAILASGRQWKAFCLASASLCLAG 512
Y+ HV +C C K N+L V+ A++ ++ ++A +Q +A ++ +A
Sbjct: 438 YWSHVENCSSCKKAHKYL----NALEVILQIASVAMIGVMAVMKQTTMSNVARIAVLVAA 493
Query: 513 VYACSTA 519
V + + +
Sbjct: 494 VLSFAAS 500
>gi|332708372|ref|ZP_08428350.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
gi|332352865|gb|EGJ32427.1| phenylpropionate dioxygenase family ring-hydroxylating dioxygenase,
large terminal subunit [Moorea producens 3L]
Length = 478
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/442 (30%), Positives = 204/442 (46%), Gaps = 38/442 (8%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRLAKLSEGQ 135
+DW E WYP++ +D+ P T+ +Q IVL+ D + ++ R + D+CPHRLA LSEG+
Sbjct: 29 FDWEEVWYPVFYVEDLDKSQPTRFTLLEQDIVLWWDKHEQMWRAFVDQCPHRLAPLSEGR 88
Query: 136 L-IDGRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGVVWVWMSQ 192
+ DGRLEC YHGW F G G+C IPQ A+I + ACV + K +QG+++V+
Sbjct: 89 INQDGRLECPYHGWAFSGTGQCEVIPQQKERGKAEISQRACVNSLPTKIAQGLLFVYPGL 148
Query: 193 KTPPNPDKLPWFENFAR--PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAK 250
K+P + G+ ++T +LPYD L+EN++DP+HIP +H R+
Sbjct: 149 AENAAKTKVPIVDALEEDPDGWVCLNTFRDLPYDALTLMENVLDPSHIPYTHHRS--VGN 206
Query: 251 REDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH 308
R + P+ EV E GF G W G K F AP ++ ++ L + G
Sbjct: 207 RANVSPVELEVVESGKCGFKGVWAEGPRKGTLGRQDTTFIAPGLMWHD--LTSKQFGRT- 263
Query: 309 YFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGFLSS 364
+ P +G+ L RF S L +LF P+WY H + V E D FL
Sbjct: 264 --LTVVYATPIRKGECRLFARFPFKFSSKLPRLFLKLTPRWYSHIGQNNVLEDDQIFLHY 321
Query: 365 QNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTI--SLPKVP 419
Q + ++ K YL + +D +V + R W V H F T+ SLPK
Sbjct: 322 QERYIEQQGGSGNFNKAFYLPTK-ADLFVFQLRFW---VNHYSIDPFPGKTLPPSLPKEV 377
Query: 420 AVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSL 479
+ + + + +GA+G NL + ++ +
Sbjct: 378 LLERYH-----SHTQKCASCRGALG-----NLQRLRLGLAVGTALVWVLLPLLVFIHPQV 427
Query: 480 SVVAAALTVLAILASGRQWKAF 501
S+V + +A+L SG W A
Sbjct: 428 SIVTVIILTVAVLMSGGVWLAL 449
>gi|427725393|ref|YP_007072670.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
gi|427357113|gb|AFY39836.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
Length = 439
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 212/462 (45%), Gaps = 56/462 (12%)
Query: 74 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGNGELRCYQDRCPHRLAKLS 132
+ +++ ++WYP+ L +D+ AP +T+ + +V++K + + D+CPHRLA LS
Sbjct: 1 MTSFNFLQQWYPVALLEDLDPSAPKAITILGKPLVIWKPRAQQKYSVFLDKCPHRLAPLS 60
Query: 133 EGQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPR---SACVRTYEVKESQGVVW 187
EG++ + RL C YHGW+F+ G C +IPQL + + + CV ++ V+ Q ++W
Sbjct: 61 EGRIDEKSDRLMCSYHGWEFDEAGSCQRIPQLGQPEILEKRRDNFCVVSFPVQTEQDLLW 120
Query: 188 VWMSQKTPPNPDK--LPWFENFAR-PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 244
VW+ + TP + LP N + GF + ++ YD + L+EN++DP+H+P +H
Sbjct: 121 VWLDETTPDLAAEMPLPLSPNISETKGFVWSTYARDVDYDWTTLVENIVDPSHVPFAHHG 180
Query: 245 TDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKT 304
KRE A+PL FE+ G+ + F+ PC+++ K
Sbjct: 181 LQ--GKREMAKPLTFEIISSEMTCIEGK----VTSGFKTNITFKPPCLVEYEIPFPSGKQ 234
Query: 305 GEKHYFTGLF-LCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH-QNASKVFEQDMGFL 362
GL C PT GK+ LI F L +L P+W+ H Q + V + DM L
Sbjct: 235 ------VGLVTYCVPTSPGKARLIAFFVRNFAKQLGRLIPRWWEHRQTRNAVIDSDMIIL 288
Query: 363 SSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG-MPYHFGHSTISLPKVPAV 421
Q + + K+ Y +D +V E+R+W D+ G +P+ ++ + P
Sbjct: 289 QRQEYFNHQSSESWKDAYKMPAEADRFVIEFRRWFDQHCEGKLPW----ESLGIKPQPLP 344
Query: 422 VEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSV 481
+E P + +RY +H HC C +K K L
Sbjct: 345 IE----------------------TDRPVVLDRYRQHTQHCSSCKGALKNTKLAKRILVT 382
Query: 482 VA-AALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAM 522
+A A++ AIL ++ K + + L G+ C AM
Sbjct: 383 MAIASVAATAILPDAKRLK---VGAGLLGFGGI--CGAIAAM 419
>gi|162568916|gb|ABY19384.1| pheophorbide A oxygenase 1 [Nicotiana tabacum]
Length = 531
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/480 (26%), Positives = 217/480 (45%), Gaps = 82/480 (17%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQDRCPHRLAKLSE 133
+ + W + WYP+ L +D+ ++P + ++ +VL+ D N + + D+CPHRLA LSE
Sbjct: 76 SKFSWRDHWYPVSLVEDLDPNSPTPFQLLNRDLVLWFDKSNSQWVAFDDKCPHRLAPLSE 135
Query: 134 GQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACVRTYEVKESQGVV 186
G++ + G L+C YHGW F G G C +IPQ ++ + PR AC + SQG++
Sbjct: 136 GRIDENGDLQCSYHGWSFNGCGSCTRIPQAASEGPEAKAVQSPR-ACATRFPTMVSQGLL 194
Query: 187 WVWMSQKTPPNPDKLPWF-----------ENFARPGFQDVSTIHELPYDHSILLENLMDP 235
+VW PD+ W E+F +P F V+ +L Y + L+EN+ DP
Sbjct: 195 FVW--------PDENAWERAQETKAPMLPEDFDKPEFATVTIQRDLFYGYDTLMENVSDP 246
Query: 236 AHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQN 295
+HI +H + T +R+ A+PL F++ GFA G D+P +F APC N
Sbjct: 247 SHIEFAHHKV--TGRRDRAKPLPFKMEASGPWGFA---GANNDKPKIT-AKFVAPCYSMN 300
Query: 296 NRELVDSK---TGEKHYFTGLFLCR---PTGQGKSMLIV-----RFGATKRSPL-AKLFP 343
E +D+K G++ + +++C P GK+ IV F T P ++FP
Sbjct: 301 KIE-IDTKLPIVGDQKWV--IWICSFNVPMAPGKTRSIVCSARNFFQFTVPGPAWWQVFP 357
Query: 344 KWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTK--------ELYLNLRSSDTWVAEYRK 395
+W H ++KV++ DM L Q ++ + ++ +L +D +V +R
Sbjct: 358 RWQEHWTSNKVYDGDMIVLQGQEKIFLAKSKENSTDVNKEYTKLTFTPTQADRFVLAFRN 417
Query: 396 WMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRY 455
W+ + G+ P FG+ + P +P+ V + + +R+
Sbjct: 418 WLRRHGNSQPEWFGN--VDQPPLPSTV-----------------------LSKRQMMDRF 452
Query: 456 FRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYA 515
+H + C C + F + L A + S + + + A L YA
Sbjct: 453 EQHTLKCSSCRNAYYTFERLQKILIGAVVVFCATAGIPSDIKLRVILASFAVLSAGLAYA 512
>gi|384251579|gb|EIE25056.1| hypothetical protein COCSUDRAFT_46572 [Coccomyxa subellipsoidea
C-169]
Length = 548
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 211/467 (45%), Gaps = 82/467 (17%)
Query: 67 ERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPH 126
ER E++ YDW ++WYPL +D+ P + + +++VL++D + + RC+QD+CPH
Sbjct: 75 EREVEQET--YDWAKQWYPLAFVEDLDPKVPHPVELLGERLVLWRDADKQWRCFQDKCPH 132
Query: 127 RLAKLSEGQL--IDGRLECLYHGWQFEGEGKCVKIPQLPADAKI-------PRSACVRTY 177
RLA LSEG++ DG L C YHGW+F+GEGKC IPQ DAK PRS C ++
Sbjct: 133 RLAPLSEGRIEPSDGTLMCSYHGWRFDGEGKCTDIPQ-SLDAKANAAACSNPRS-CAISH 190
Query: 178 EVKESQGVVWVW-------MSQKTPPNPDKLPWFENFARP----GFQDV-----STIHEL 221
+ QG VWV+ P L E+ P G +D +L
Sbjct: 191 PTQVLQGKVWVFGEGGSRAFIDSAAVKPALLEDLEDTYPPREKNGGEDCFFAGGHYARDL 250
Query: 222 PYDHSILLENLMDPAHIPISH-----DRT-DWTAKREDAQPLGFEVTERTDRGFAGRWGK 275
PY S L+ENL DP+H+ SH DRT D T K +P + + A
Sbjct: 251 PYAWSTLMENLADPSHVNFSHHNVVGDRTVDQTMKIVSKEPSKTVPSIKDTFKMAVTSFD 310
Query: 276 EKDEPLPNF-LRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKS-MLIVRFGAT 333
+K F + F APC+++ + G KH + +++ PTG G+S +L T
Sbjct: 311 DKARDYQTFDMEFVAPCLVKWG--IPPWGVGIKHGYMPMYMI-PTGPGRSKILWCMLLPT 367
Query: 334 KRSP-----LAKLFPKWYFHQNAS-KVFEQDMGFLSSQNEVLMKETVPT-KELYLNLRSS 386
P + +L PKW H + + +V + D G L Q + KE LY +
Sbjct: 368 SSMPAPAKLMQRLTPKWLQHISITPQVLDGDTGLLHGQEVAVSKEAEKDLNRLYYMPAQA 427
Query: 387 DTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTM 446
D +VA YRKW+ G G P + +P+ +
Sbjct: 428 DRFVAAYRKWLAGRGGGGP-------LPMPETSELQAQ---------------------- 458
Query: 447 HAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILA 493
P L +RY +H +C CS ++ F+ +L +V AAL + +
Sbjct: 459 --PQLLDRYSQHTQNCPSCSRAVQVFT----ALRIVTAALAAVCAMG 499
>gi|222626003|gb|EEE60135.1| hypothetical protein OsJ_13022 [Oryza sativa Japonica Group]
Length = 548
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 136/474 (28%), Positives = 203/474 (42%), Gaps = 83/474 (17%)
Query: 61 GPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCY 120
PA+ EER +DW ++WYP+ D+ P G V ++V + DG GE R
Sbjct: 74 APAAGEER--------FDWLDQWYPVAPVCDLDPRKPHGKMVLGLRVVAWFDGGGEWRVV 125
Query: 121 QDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSACVRT 176
D CPHRLA LSEG++ GRL+C YHGW F+G G C IPQ PA ACV +
Sbjct: 126 DDACPHRLAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIPQAPALGPPVHKNSKACVAS 185
Query: 177 YEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSILLEN 231
Y ++W + + P D L P+F + P F V + + PY + +L+EN
Sbjct: 186 YPSVVQNNILWFY-PRTEPEYRDVLQRKRPPYFPDLDDPSFNTVFGVRDFPYGYDMLVEN 244
Query: 232 LMDPAHIPISH--------DRTD-----------WTAKREDAQPLGFEVTERTDRGFAGR 272
LMDPAH+P +H D+ D +E P+ ++ E GF
Sbjct: 245 LMDPAHVPYAHKGLFPQFQDKEDPGRYNIHLLSTVEFDQERGGPVKMKIEEANIDGFLSI 304
Query: 273 WGKEKDEPLPNFLRFEAPCVLQNNREL-------VDSKTGEKHYFTGL-FLCRPTGQGKS 324
G+ RF APC + N EL D + ++ L FLC P G+S
Sbjct: 305 QGENWGH-----FRFIAPCTI-NRSELPLETLAHFDQEKQQQQPQGMLVFLCIPVAPGRS 358
Query: 325 MLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVP--TKELYLN 382
+I F + + K P+W H + V + D+ L + V K Y+
Sbjct: 359 RVIWVFPQSVSAWPDKFIPRWLHHMVTNTVLDSDLYLLHIEERNFAAVGVDKWQKACYVP 418
Query: 383 LRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGA 442
SD + +R W K + G +T + ++P ++P K
Sbjct: 419 TL-SDNMIITFRNWFRKYCK---HQVGWATPMVNQLP----------------TTPTKD- 457
Query: 443 IGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGR 496
L RY+ HV+ C CS+ +K + +L V A++ V+ LA+G+
Sbjct: 458 -------QLMERYWSHVMQCTSCSAALKWMRAMEVALQV--ASVAVVGFLAAGK 502
>gi|1935909|gb|AAC49676.1| lethal leaf-spot 1, partial [Zea mays]
Length = 467
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 217/468 (46%), Gaps = 80/468 (17%)
Query: 62 PASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCY 120
P+++ GE+ + W + WYP+ L +D+ P + ++ +V++K+ +GE
Sbjct: 3 PSTSAPESGEK----FSWRDHWYPVSLVEDLDPSRPTPFQLLNRDLVIWKEPKSGEWVAL 58
Query: 121 QDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQ-LPA--DAKIPRS--ACV 174
DRCPHRLA LSEG++ + G L+C YHGW F+G G C KIPQ +P +A+ RS AC
Sbjct: 59 DDRCPHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTKIPQAMPEGPEARAVRSPKACA 118
Query: 175 RTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 229
+ SQG+++VW + P LP + F P F V+ +L Y + L+
Sbjct: 119 IKFPTLVSQGLLFVWPDENGWEKAAATKPPMLP--KEFEDPAFSTVTIQRDLFYGYDTLM 176
Query: 230 ENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFL-RFE 288
EN+ DP+HI +H + T +R+ A+PL F + G++G + P FE
Sbjct: 177 ENVSDPSHIEFAHHKV--TGRRDRARPLTFRMESSGAWGYSG-----ANSGNPRITATFE 229
Query: 289 APCVLQNNRELVDSKT---GEKHYFTGLFLCR---PTGQGKSMLIV-------RFGATKR 335
APC N E +D+K G++ + +++C P GK+ IV +F +
Sbjct: 230 APCYALNKIE-IDTKLPIFGDQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFTMPGK 286
Query: 336 SPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTK--------ELYLNLRSSD 387
+ +L P+WY H ++ V++ DM L Q ++ + T + ++ +D
Sbjct: 287 A-WWQLVPRWYEHWTSNLVYDGDMIVLQGQEKIFLAATKESSTDINQQYTKITFTPTQAD 345
Query: 388 TWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMH 447
+V +R W+ K G+ P FG+ T +P+ V +
Sbjct: 346 RFVLAFRTWLRKFGNSQPEWFGNPTQE--ALPSTV-----------------------LS 380
Query: 448 APNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASG 495
+ +RY +H + C C AF +L V TV+ A+G
Sbjct: 381 KREMLDRYEQHTLKCSSCKGAYNAF----QNLQKVFMGATVVCCAAAG 424
>gi|224073160|ref|XP_002304001.1| predicted protein [Populus trichocarpa]
gi|222841433|gb|EEE78980.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 138/496 (27%), Positives = 202/496 (40%), Gaps = 90/496 (18%)
Query: 67 ERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCP 125
E Q +DW +WYP+ D+ P TV +V++ D N E + + D CP
Sbjct: 20 ELEAASQEEKFDWYAQWYPVMPVCDLDKRVPHAKTVMGLDLVVWWDRNESEWKVFDDSCP 79
Query: 126 HRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKE 181
HRLA LSEG++ GRL+C+YHGW F G G C IPQ P ACV Y
Sbjct: 80 HRLAPLSEGRIDQWGRLQCVYHGWCFNGSGNCKFIPQAPPAGPPVHTSMKACVAVYPSTV 139
Query: 182 SQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSILLEN 231
+VW W PN D + P+ P F + PY + +L+EN
Sbjct: 140 HHDIVWFW------PNTDPQYRDIITKKQPPFIPELDDPSFTKHMGNRDFPYGYDVLIEN 193
Query: 232 LMDPAHIPISHDRTDWTAK----------REDAQPLGFEVTERTDRGFAGRWGKEKDEPL 281
L+DPAH+P +H K RE P+ V + +GF D
Sbjct: 194 LLDPAHLPYAHYGLVNAPKPQGILMHYSDREGGGPIDLSVKKLDSQGFFENQDHFGDT-- 251
Query: 282 PNFLRFEAPCVLQNNRELVDS--KTGE-KHYFTGLFLCRPTGQGKSMLIVRFGATKRSPL 338
+F APC+ + D+ K G + +F+C P G+S LI F +
Sbjct: 252 ----KFIAPCISYASSSPGDAPEKQGSMQKRMAFVFICIPVSPGRSRLIWIFPRNFGLWI 307
Query: 339 AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKET---------VPTKELYLNLRSSDTW 389
K+ P+W FH + VF+ D+ L Q M VPTK SD
Sbjct: 308 DKVVPRWIFHLKYNLVFDSDLYLLHMQERKFMDVGPANWQKACFVPTK--------SDAL 359
Query: 390 VAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAP 449
+ YR+W +K G G +LP +SP +
Sbjct: 360 LVGYRRWFNKYSGGQVDWKGKYCGALP------------------PTSPRE--------- 392
Query: 450 NLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVV--AAALTVLAILASGRQWKAFCLASAS 507
L +RY+ HV++C+ C++ K N+L V+ A+L + + A+ +Q + A
Sbjct: 393 QLFDRYWSHVVNCRSCNAAYKGL----NALEVILQVASLAFIGVAAATKQNANTMVVMAV 448
Query: 508 LCLAGVYACSTAIAMN 523
+C AG + I+ N
Sbjct: 449 VCFAGSRWLARFISKN 464
>gi|428304442|ref|YP_007141267.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
gi|428245977|gb|AFZ11757.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
Length = 441
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 207/464 (44%), Gaps = 69/464 (14%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSE 133
+ +++ + WYP+ +D+ P +T+ +++V++K E R + D+CPHRLA LSE
Sbjct: 4 STFNFFQHWYPIAPLEDLDPKRPTPVTILGRRLVVWKPTVSEQYRVFLDQCPHRLAPLSE 63
Query: 134 GQ--LIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWV 188
G+ L G L C YHGWQF EG+C IPQ I ++ CV T +++ G++WV
Sbjct: 64 GRVDLETGNLMCSYHGWQFNPEGECTHIPQAENPDLIAKNKDNFCVVTLPIQQINGLLWV 123
Query: 189 WMSQKTP--PNPDKLPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
W+ +K+ LP + A GF S + +L YD L+EN+ DP+H+P SH
Sbjct: 124 WLDEKSADLAASTPLPLSPSIDASKGFVWSSMVRDLEYDWQTLVENVADPSHVPFSHHGV 183
Query: 246 DWTAKREDAQPLGFEVTERT--------DRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNR 297
R+ A+P+ E+ + T RGFA R + FE PC L+
Sbjct: 184 Q--GNRKQAKPIAMEIAQSTPDLIEATLSRGFATR------------ITFEPPCRLEYAM 229
Query: 298 ELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH-QNASKVFE 356
E K F + C P GKS ++ +F L + P+W+ H QN + V +
Sbjct: 230 EFPGGKK-----FGLVVYCVPVSPGKSRIVGQFPRNFAKTLHHVIPRWWDHIQNRNLVLD 284
Query: 357 QDMGFLSSQNEVLMK--ETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG-MPYHFGHSTI 413
DM L Q L + T K Y S+D V E+R+W DK G +P+ + +
Sbjct: 285 GDMVLLHYQEHRLQEYESTQSWKTAYKMPTSADLLVIEFRRWFDKYCQGKLPWE--QTVV 342
Query: 414 SLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFS 473
P+ P V L +RY +H + C+ CS +K
Sbjct: 343 KSPEQPLVNREV-------------------------LLDRYKQHTMICESCSGALKNVQ 377
Query: 474 TWKNSL--SVVAAALTVLAILASGRQWKAFCLASASLCLAGVYA 515
+ +L + TV A+ + R L + +L G YA
Sbjct: 378 RSQVALIGYFAVSVATVAAMPDNLRVSLGLPLIALALIGLGGYA 421
>gi|312281805|dbj|BAJ33768.1| unnamed protein product [Thellungiella halophila]
Length = 540
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/473 (27%), Positives = 211/473 (44%), Gaps = 70/473 (14%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSEGQ 135
+ W + WYP+ L +D+ + P + + +VL+ D N + + D CPHRLA LSEG+
Sbjct: 85 FKWRDHWYPVSLVEDLDPNVPTRFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGR 144
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACVRTYEVKESQGVVWV 188
L + G L+C YHGW F G G C +IPQ K PR AC + SQG+++V
Sbjct: 145 LDENGHLQCSYHGWSFSGCGSCTRIPQASTSGPEARAVKSPR-ACAIKFPTMVSQGLLFV 203
Query: 189 WMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
W + +P +LP ++F +P F V+ +L Y + L+EN+ DP+HI +H
Sbjct: 204 WPDENGWDRANSIDPPRLP--DDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHH 261
Query: 244 RTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSK 303
+ T +R+ A+PL F+V GF G D P +F APC N E +D+K
Sbjct: 262 KV--TGRRDRAKPLPFKVESSGPWGFQ---GANDDNPRIT-AKFVAPCYSLNKIE-IDAK 314
Query: 304 T---GEKHYFTGLFLCR---PTGQGKSMLIV-----RFGATKRSPL-AKLFPKWYFHQNA 351
G + + +++C P GK+ IV F + P ++ P+WY H +
Sbjct: 315 LPIFGNQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVPRWYEHWTS 372
Query: 352 SKVFEQDMGFLSSQNEVLMKETVPTKELYLNLR---------SSDTWVAEYRKWMDKVGH 402
+ V++ DM L Q +V + +++ + + +N +D +V +R W+ + G
Sbjct: 373 NLVYDGDMIVLQGQEKVFLSKSMDSPDYDVNKEYTKLTFTPTQADRFVLAFRNWLRRHGK 432
Query: 403 GMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHC 462
P FG + + P +P+ V + + +R+ +H C
Sbjct: 433 SQPDWFGSTAANQP-LPSTV-----------------------LTKREMLDRFEQHTQVC 468
Query: 463 KGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYA 515
C K F T K L A + S Q + A + A YA
Sbjct: 469 SSCKGAYKGFQTLKKFLVGTTVFFAATAGVPSDVQIRLVLAGLALISAASAYA 521
>gi|56751940|ref|YP_172641.1| cell death suppressor protein Lls1-like protein [Synechococcus
elongatus PCC 6301]
gi|81300973|ref|YP_401181.1| cell death suppressor protein Lls1-like protein [Synechococcus
elongatus PCC 7942]
gi|56686899|dbj|BAD80121.1| cell death suppressor protein Lls1 homolog [Synechococcus elongatus
PCC 6301]
gi|81169854|gb|ABB58194.1| cell death suppressor protein Lls1-like [Synechococcus elongatus
PCC 7942]
Length = 461
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 137/497 (27%), Positives = 222/497 (44%), Gaps = 77/497 (15%)
Query: 53 VGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD 112
+ D +VL A +R +DW E WYP++ +D+ D P T+ + +V++ D
Sbjct: 7 LADAQVLPAGGPASDR--------FDWAEVWYPVHYLRDLNRDRPNAFTLLGRDLVIWWD 58
Query: 113 GNGE-LRCYQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQ--LPADAKI 168
+ E R ++D CPHR +LSEG+L +GRLEC YHGW F G G C IPQ A
Sbjct: 59 RSAEQWRAFEDACPHRQVRLSEGRLDAEGRLECPYHGWAFTGTGDCAVIPQQATTGQAHT 118
Query: 169 PRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD-----VSTIHELPY 223
AC +T +QG+++V+ TP D++P P D + T +LPY
Sbjct: 119 SDRACAKTLPTATAQGLLFVYAG--TPERADRVP--LPLVEPWGTDADWVCIDTFRDLPY 174
Query: 224 DHSILLENLMDPAHIPISHDRTDWTAKREDAQPL-GFEVTERTDRGFAGRW--GKEKDEP 280
D LLEN++DP+H+P +H + R +A P+ ++ E +GF G W G + +
Sbjct: 175 DALTLLENVLDPSHLPFTHHGS--VGNRANAGPMTDLKIVESDRQGFQGVWPEGPRRGKL 232
Query: 281 LPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAK 340
F AP ++ ++ E DS + P G+ + RF +S + +
Sbjct: 233 GTQSTTFIAPSLMWHDLE-ADSLGRA----MTVVYATPIRAGECRIFARFPFRFKSAIPR 287
Query: 341 LF----PKWYFHQNASKVFEQDMGFLSSQNEVLMKE---TVPTKELYLNLRSSDTWVAEY 393
F P W+ H + V E+D FL Q + ++ +++ YL S+D +V
Sbjct: 288 FFLRIAPTWFQHLGQNTVLEEDQIFLHHQERRIQQQGGSATYSRQCYLPT-SADRFVLAL 346
Query: 394 RKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLAN 453
+W+D+ G+P+ P P PA +I P L
Sbjct: 347 HRWVDRYA-GVPF---------PNEPL-----------------PASRSI-----PELLE 374
Query: 454 RYFRHVIHCKGCSSVIKAFSTWKN-SLSVVAAALTVLAILASGRQWKAFCLASASLCLAG 512
RY H +HC+ C++ + + ++++ A + T+ ILA A A+ + LA
Sbjct: 375 RYQSHTLHCRSCAAAWRRSKQGQTVAIAIAALSWTLAPILAV-----AGVSATTVILLAV 429
Query: 513 VYACSTAIAMNTTNFIR 529
+ + AIA R
Sbjct: 430 LGLSAAAIAWGLKQLQR 446
>gi|225436442|ref|XP_002274210.1| PREDICTED: pheophorbide a oxygenase, chloroplastic [Vitis vinifera]
gi|297734893|emb|CBI17127.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 145/551 (26%), Positives = 238/551 (43%), Gaps = 105/551 (19%)
Query: 4 SLRSLFFSPLLKIPSPKLTPPTTNVIISLNKTPKSRKCHAVTDRSSTSTVGDHKVLVGPA 63
+ RSL FSPL PPT V + + + AV D S+S+
Sbjct: 40 TTRSLTFSPLRVA-----APPTQPVTSDQSNEEREDEVVAVDDERSSSS----------- 83
Query: 64 SAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQD 122
+ + W + WYP+ L +D+ + P + + IVL+KD E + D
Sbjct: 84 -----------SKFLWRDHWYPVSLIEDLDTNRPTPFQLLGRDIVLWKDKSTAEWVAFDD 132
Query: 123 RCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRT 176
+CPHRLA LSEG++ + G L+C YHGW F+ G C +IPQ + R+ AC
Sbjct: 133 KCPHRLAPLSEGRIDENGYLQCSYHGWSFDKCGSCKRIPQALPEGPEARAVGSPRACATR 192
Query: 177 YEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLEN 231
+ SQG+++VW + + P LP + F P F V+ +L Y + L+EN
Sbjct: 193 FPTMVSQGLLFVWPDENGWERASATKPPMLP--DEFENPEFSTVTIQRDLFYGYDTLMEN 250
Query: 232 LMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNF-LRFEAP 290
+ DP+HI +H + T +R+ A+PL F++ GFAG ++ P +F AP
Sbjct: 251 VSDPSHIDFAHHKV--TGRRDRAKPLPFKLESSGPGGFAG-----ANDGNPRISAKFVAP 303
Query: 291 CVLQNNRELVDSK---TGEKHYFTGLFLCR---PTGQGKSMLIV-----RFGATKRSPL- 338
C N E +D+K GE+ + +++C P GK+ IV F + P
Sbjct: 304 CYYMNKIE-IDTKLPIVGEQKW--KIWICSFNVPMAPGKTRSIVCSARNFFQFSMPGPAW 360
Query: 339 AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKE----TVPTKELYLNL----RSSDTWV 390
++ P+W+ H ++KV++ DM L Q ++ + + + E Y + SD +V
Sbjct: 361 WQVVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSKSKEGSADVNEQYTQITFTPTQSDRFV 420
Query: 391 AEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPN 450
+R W+ + G+ P F G+S P + +
Sbjct: 421 LAFRNWLRRHGNSQPDWF-----------------------GISNQGPLPSTV--LSKRQ 455
Query: 451 LANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCL 510
+ +R+ +H ++C C F T + L + AA + W + L
Sbjct: 456 MLDRFEQHTLNCSSCKGAYTTFQTMQK-LFIGAAVVFCATTGIPSEMW-------IRVIL 507
Query: 511 AGVYACSTAIA 521
AG+ S+A+A
Sbjct: 508 AGLALLSSALA 518
>gi|359462641|ref|ZP_09251204.1| pheophorbide A oxygenase [Acaryochloris sp. CCMEE 5410]
Length = 458
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 131/456 (28%), Positives = 208/456 (45%), Gaps = 51/456 (11%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLY--KDGNGELRCYQDRCPHRLAKLSEG 134
+++ ++WYP+ +D+ P +T+ Q V++ KD + L +QD CPHRLA LSEG
Sbjct: 16 FNFWQQWYPVAPLEDLDPQRPTPITLLGQHFVIWQPKDSDQYL-VFQDLCPHRLAPLSEG 74
Query: 135 QLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWVW 189
++ + G+L C YHGWQF+ +G C IPQ A+A P+ + CV + + G++WVW
Sbjct: 75 RIDEQTGQLMCSYHGWQFDQQGLCTHIPQ--AEAITPQQSQLYCVTSVPTQSQSGLLWVW 132
Query: 190 MSQKT----PPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
T P L F N A F S + +L YD L+EN+ DP+H+P +H
Sbjct: 133 PDPDTQDIAATQPLPLSPFVN-ADQNFVWSSVMRDLAYDWQTLVENVSDPSHVPFAHHGV 191
Query: 246 DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
R A P+ EV T + + F+ PC ++ + D K
Sbjct: 192 Q--GNRNQAAPIPMEVLTSTPELIE----VQTTGKFSTNITFQPPCRVEYQFSIGDGKQA 245
Query: 306 EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH-QNASKVFEQDMGFLSS 364
T + C P G+S ++ F + L K+ P+W H +N + V + DM L S
Sbjct: 246 -----TMVTYCIPIAPGRSRIVALFARNFATGLMKVIPRWVEHMKNRNPVLDGDMILLRS 300
Query: 365 QNEVLMK--ETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG-MPYHFGHSTISLPKVPAV 421
Q + L++ +T + +Y S+D V EYR+W +K HG +P+ H I
Sbjct: 301 QEKQLLQHTQTQSWQTIYKLPTSADRLVIEYRRWFEKYSHGQIPWGSAHQQIP------- 353
Query: 422 VEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSL-S 480
V++++ P L +RY +H + C C + + L +
Sbjct: 354 -----------VASNNYDYLQPQGEQRPQLLDRYHQHTLICSSCRGALSRIKLLQKMLVA 402
Query: 481 VVAAALTVLAILASGRQ--WKAFCLASASLCLAGVY 514
V A A++ AIL + W + +A L L G Y
Sbjct: 403 VFAIAISGAAILPDDLRATWGIPLVITALLGLGGCY 438
>gi|89077585|gb|ABD60316.1| chloroplast pheophorbide a oxygenase PaO2 [Brassica napus]
Length = 535
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 211/473 (44%), Gaps = 70/473 (14%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSEGQ 135
+ W + WYP+ L +D+ ++P + + +VL+ D N + + D CPHRLA LSEG+
Sbjct: 80 FKWRDHWYPVSLVEDLDPNSPTRFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGR 139
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACVRTYEVKESQGVVWV 188
L + G L+C YHGW F G G C KIPQ K PR AC + SQG+++V
Sbjct: 140 LDENGHLQCSYHGWSFAGCGSCTKIPQAATSGPEARAVKSPR-ACAIKFPTMVSQGLLFV 198
Query: 189 WMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
W + P +LP ++F +P F V+ +L Y + L+EN+ DP+HI +H
Sbjct: 199 WPDENGWDRANSIQPPRLP--DDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSHIDFAHH 256
Query: 244 RTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSK 303
+ T +R+ A+PL F+V GF G D+ +F APC N E +D+K
Sbjct: 257 KV--TGRRDRAKPLPFKVESGGPWGFQG----ANDDSPKITAKFVAPCYSLNKIE-IDAK 309
Query: 304 ---TGEKHYFTGLFLCR---PTGQGKSMLIV-----RFGATKRSPL-AKLFPKWYFHQNA 351
G + + +++C P GK+ IV F + P ++ P+WY H +
Sbjct: 310 LPIVGNQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVPRWYEHWTS 367
Query: 352 SKVFEQDMGFLSSQNEVLMKETVPTKELYLNLR---------SSDTWVAEYRKWMDKVGH 402
+ V++ DM L Q +V + +++ + + +N + +D +V +R W+ + G
Sbjct: 368 NLVYDGDMIVLQGQEKVFLSKSMESPDYDVNKQYTKLTFTPTQADRFVLAFRNWLRRYGK 427
Query: 403 GMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHC 462
P FG + + P +P+ V + + +R+ +H C
Sbjct: 428 SQPEWFGSTAANQP-LPSTV-----------------------LTKREMLDRFEQHTQVC 463
Query: 463 KGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYA 515
C F K L L A + S Q + A + A YA
Sbjct: 464 SSCKGAYNGFQIVKKFLVGTTVFLAATAGVPSDVQIRLVLAGLALISAASAYA 516
>gi|220908321|ref|YP_002483632.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7425]
gi|219864932|gb|ACL45271.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7425]
Length = 477
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 193/426 (45%), Gaps = 61/426 (14%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSEGQ 135
++W E WYP++ D+ P T+ Q +VL+ D E R + D+CPHRLA LSEG+
Sbjct: 28 FNWHEAWYPVHYVVDLDRTQPTPFTLLGQDLVLWWDRQAESWRAFADQCPHRLAPLSEGR 87
Query: 136 LI-DGRLECLYHGWQFEGEGKCVKIP-QLPAD-AKIPRSACVRTYEVKESQGVVWVWMSQ 192
+ DG LEC YHGW F GEG+C +IP Q P A + ACV ++ QG+++V+
Sbjct: 88 IAEDGLLECPYHGWAFTGEGQCDRIPQQFPGQMAHTSKRACVTSFPTTVRQGLLFVYAGD 147
Query: 193 KTPPNPDK--LPWFENFARPGFQD---VSTIHELPYDHSILLENLMDPAHIPISHDRTDW 247
P N D+ +P QD ++T +LPYD LLEN++D +H+P +H R+
Sbjct: 148 --PANADRVSVPIIAALEESP-QDWVCLNTFRDLPYDALTLLENVLDSSHVPFTHHRS-- 202
Query: 248 TAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
R +A P+ ++ E +GF G W G + F AP ++ + +L + G
Sbjct: 203 VGNRANAAPVELDMLEFGKQGFQGFWQDGPRRGTLGSQTTTFIAPALMWH--DLTTKQFG 260
Query: 306 EKHYFTGLFLCRPTGQGKSMLIVR----FGATKRSPLAKLFPKWYFHQNASKVFEQDMGF 361
T ++ P +G+ L R FG+ + L KL P+WY H + V E D F
Sbjct: 261 RT--LTAVY-ATPIRKGECRLFARFPFKFGSRLPALLIKLTPRWYAHIGNNNVLEDDQIF 317
Query: 362 LSSQNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKV 418
L Q L + K YL R +DT+V RKW+++ F ++S P
Sbjct: 318 LHLQERYLEAQGGSANFAKACYLPTR-ADTYVTALRKWVNEYAANP---FPDDSLSPP-- 371
Query: 419 PAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNS 478
+ L +RY H HC C +K K
Sbjct: 372 ---------------------------LSKEALLDRYHSHTRHCGSCRRALKTIQQLKWG 404
Query: 479 LSVVAA 484
L ++A
Sbjct: 405 LGILAG 410
>gi|41469408|gb|AAS07231.1| putative iron-sulfur cluster-binding protein [Oryza sativa Japonica
Group]
Length = 527
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 198/455 (43%), Gaps = 66/455 (14%)
Query: 61 GPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCY 120
PA+ EER +DW ++WYP+ D+ P G V ++V + DG GE R
Sbjct: 74 APAAGEER--------FDWLDQWYPVAPVCDLDPRKPHGKMVLGLRVVAWFDGGGEWRVV 125
Query: 121 QDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSACVRT 176
D CPHRLA LSEG++ GRL+C YHGW F+G G C IPQ PA ACV +
Sbjct: 126 DDACPHRLAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIPQAPALGPPVHKNSKACVAS 185
Query: 177 YEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSILLEN 231
Y ++W + + P D L P+F + P F V + + PY + +L+EN
Sbjct: 186 YPSVVQNNILWFY-PRTEPEYRDVLQRKRPPYFPDLDDPSFNTVFGVRDFPYGYDMLVEN 244
Query: 232 LMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPC 291
LMDPAH H + +E P+ ++ E GF G+ RF APC
Sbjct: 245 LMDPAH--NIHLLSTVEFDQERGGPVKMKIEEANIDGFLSIQGENWGH-----FRFIAPC 297
Query: 292 VLQNNREL-------VDSKTGEKHYFTGL-FLCRPTGQGKSMLIVRFGATKRSPLAKLFP 343
+ N EL D + ++ L FLC P G+S +I F + + K P
Sbjct: 298 TI-NRSELPLETLAHFDQEKQQQQPQGMLVFLCIPVAPGRSRVIWVFPQSVSAWPDKFIP 356
Query: 344 KWYFHQNASKVFEQDMGFLSSQNEVLMKETVP--TKELYLNLRSSDTWVAEYRKWMDKVG 401
+W H + V + D+ L + V K Y+ SD + +R W K
Sbjct: 357 RWLHHMVTNTVLDSDLYLLHIEERNFAAVGVDKWQKACYVPTL-SDNMIITFRNWFRKYC 415
Query: 402 HGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIH 461
+ G +T + ++P ++P K L RY+ HV+
Sbjct: 416 K---HQVGWATPMVNQLP----------------TTPTKD--------QLMERYWSHVMQ 448
Query: 462 CKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGR 496
C CS+ +K + +L V A++ V+ LA+G+
Sbjct: 449 CTSCSAALKWMRAMEVALQV--ASVAVVGFLAAGK 481
>gi|226434019|gb|ACO56118.1| pheide a oxyganase [Vitis vinifera]
Length = 539
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 145/551 (26%), Positives = 238/551 (43%), Gaps = 105/551 (19%)
Query: 4 SLRSLFFSPLLKIPSPKLTPPTTNVIISLNKTPKSRKCHAVTDRSSTSTVGDHKVLVGPA 63
+ RSL FSPL PPT V + + + AV D S+S+
Sbjct: 40 TTRSLTFSPLRVA-----APPTQPVTSDQSNEEREDEIVAVDDERSSSS----------- 83
Query: 64 SAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQD 122
+ + W + WYP+ L +D+ + P + + IVL+KD E + D
Sbjct: 84 -----------SKFLWRDHWYPVSLIEDLDTNRPTPFQLLGRDIVLWKDKSTAEWVAFDD 132
Query: 123 RCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRT 176
+CPHRLA LSEG++ + G L+C YHGW F+ G C +IPQ + R+ AC
Sbjct: 133 KCPHRLAPLSEGRIDENGYLQCSYHGWSFDKCGSCKRIPQALPEGPEARAVGSPRACATR 192
Query: 177 YEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLEN 231
+ SQG+++VW + + P LP + F P F V+ +L Y + L+EN
Sbjct: 193 FPTMVSQGLLFVWPDENGWERASATKPPMLP--DVFENPEFSTVTIQRDLFYGYDTLMEN 250
Query: 232 LMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNF-LRFEAP 290
+ DP+HI +H + T +R+ A+PL F++ GFAG ++ P +F AP
Sbjct: 251 VSDPSHIDFAHHKV--TGRRDRAKPLPFKLESSGPGGFAG-----ANDGNPRISAKFVAP 303
Query: 291 CVLQNNRELVDSK---TGEKHYFTGLFLCR---PTGQGKSMLIV-----RFGATKRSPL- 338
C N E +D+K GE+ + +++C P GK+ IV F + P
Sbjct: 304 CYYMNKIE-IDTKLPIVGEQKW--KIWICSFNVPMAPGKTRSIVCSARNFFQFSMPGPAW 360
Query: 339 AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKE----TVPTKELYLNL----RSSDTWV 390
++ P+W+ H ++KV++ DM L Q ++ + + + E Y + SD +V
Sbjct: 361 WQVVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSKSKEGSADVNEQYTQITFTPTQSDRFV 420
Query: 391 AEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPN 450
+R W+ + G+ P F G+S P + +
Sbjct: 421 LAFRNWLRRHGNSQPDWF-----------------------GISNQGPLPSTV--LSKRQ 455
Query: 451 LANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCL 510
+ +R+ +H ++C C F T + L + AA + W + L
Sbjct: 456 MLDRFEQHTLNCSSCKGAYTTFQTMQK-LFIGAAVVFCATTGIPSEMW-------IRVIL 507
Query: 511 AGVYACSTAIA 521
AG+ S+A+A
Sbjct: 508 AGLALLSSALA 518
>gi|15230543|ref|NP_190074.1| pheophorbide a oxygenase [Arabidopsis thaliana]
gi|41688605|sp|Q9FYC2.1|PAO_ARATH RecName: Full=Pheophorbide a oxygenase, chloroplastic; Short=AtPaO;
Short=Pheide a oxygenase; AltName: Full=Accelerated cell
death 1; AltName: Full=Lethal leaf-spot 1 homolog;
Short=Lls1; Flags: Precursor
gi|9798391|emb|CAC03538.1| lethal leaf-spot 1 homolog Lls1 [Arabidopsis thaliana]
gi|20260386|gb|AAM13091.1| lethal leaf-spot 1 homolog Lls1 [Arabidopsis thaliana]
gi|332644443|gb|AEE77964.1| pheophorbide a oxygenase [Arabidopsis thaliana]
Length = 537
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 226/507 (44%), Gaps = 82/507 (16%)
Query: 64 SAEERRGERQV--------ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG 115
S EE+R E + +++ W + WYP+ L +D+ + P + + +VL+ D N
Sbjct: 61 STEEKRIEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLDPNVPTPFQLLGRDLVLWFDRND 120
Query: 116 E-LRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA------K 167
+ + D CPHRLA LSEG+L + G L+C YHGW F G G C +IPQ K
Sbjct: 121 QKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVK 180
Query: 168 IPRSACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELP 222
PR AC + SQG+++VW + P +LP ++F +P F V+ +L
Sbjct: 181 SPR-ACAIKFPTMVSQGLLFVWPDENGWDRANSIEPPRLP--DDFDKPEFSTVTIQRDLF 237
Query: 223 YDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLP 282
Y + L+EN+ DP+HI +H + T +R+ A+PL F+V GF G D P
Sbjct: 238 YGYDTLMENVSDPSHIDFAHHKV--TGRRDRAKPLPFKVESSGPWGFQ---GANDDSPRI 292
Query: 283 NFLRFEAPCVLQNNRELVDSK---TGEKHYFTGLFLCR---PTGQGKSMLIV-----RFG 331
+F APC N EL D+K G + + +++C P GK+ IV F
Sbjct: 293 T-AKFVAPCYSMNKIEL-DAKLPIVGNQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQ 348
Query: 332 ATKRSPL-AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLR------ 384
+ P ++ P+WY H ++ V++ DM L Q +V + +++ + + +N +
Sbjct: 349 FSVPGPAWWQVVPRWYEHWTSNLVYDGDMIVLQGQEKVFLAKSMESPDYDVNKQYTKLTF 408
Query: 385 ---SSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKG 441
+D +V +R W+ + G P FG ST S +P+ V
Sbjct: 409 TPTQADRFVLAFRNWLRRHGKSQPEWFG-STPSNQPLPSTV------------------- 448
Query: 442 AIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAF 501
+ + +R+ +H C C +F K L A + S Q +
Sbjct: 449 ----LTKRQMLDRFDQHTQVCSSCKGAYNSFQILKKFLVGATVFWAATAGVPSDVQIR-L 503
Query: 502 CLASASLCLAGVYACSTAIAMNTTNFI 528
LA SL A A + A+ NF+
Sbjct: 504 VLAGLSLISA---ASAYALHEQEKNFV 527
>gi|307153246|ref|YP_003888630.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7822]
gi|306983474|gb|ADN15355.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7822]
Length = 482
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/468 (27%), Positives = 201/468 (42%), Gaps = 81/468 (17%)
Query: 20 KLTPPTTNVIISLNKTPKSRKCHAVTDRSSTSTVGDHKVLVGPASAEERRGERQVADYDW 79
K+TP T+ +I+ NK + + + S+ G +D
Sbjct: 8 KITPMTSTELIAFNKISPTTSFNQTDELSA--------------------GGLDPTRFDP 47
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-ELRCYQDRCPHRLAKLSEGQLID 138
E WYP++ KD+ P T+ D+++V++ D N + R + D+CPHRLA LSEG++ +
Sbjct: 48 QEAWYPIHYVKDLDKTKPTSFTLLDRKLVIWWDKNADQWRVFDDQCPHRLALLSEGRINE 107
Query: 139 -GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQKTP 195
G +EC YHGW F G GKC IPQ P K S ACV + V QG+++ + P
Sbjct: 108 EGLIECPYHGWTFSGSGKCEFIPQQPQGTKAEDSKRACVNSLPVSVCQGLLFTY-----P 162
Query: 196 PNPDKLPWFENFARPGFQD-------VSTIHELPYDHSILLENLMDPAHIPISHDRTDWT 248
NP+ P +D + T +LPYD +LEN++D +H+P +H T
Sbjct: 163 GNPENAPKVRVPIIEPLEDNSGEWVCIDTFRDLPYDALTVLENVLDSSHVPYTHHGT--V 220
Query: 249 AKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH 308
R++A P+ E+ + GF G W ++ P L + + N D + +
Sbjct: 221 GNRQNAAPVELEIVKSGREGFIGAW---EEGPRKGTLGRQDTIFIAPNFMYHDLTSKQFG 277
Query: 309 YFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGFLSS 364
+ P +GK L RF + L LF P+WY H N + + E D FL
Sbjct: 278 RTLTVVYATPISKGKCRLFARFPFKFAAKLPGLFINLTPRWYSHTNQNTILEDDQIFLHY 337
Query: 365 QNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAV 421
Q L + K YL + +DT+V+ R+W+++ P F T++ P
Sbjct: 338 QERFLEQAGGSQKFNKAFYLPTK-ADTYVSALRQWVNQY-QAEP--FKEQTLAPP----- 388
Query: 422 VEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVI 469
+ L +RY H ++C CS+ +
Sbjct: 389 ------------------------LSKEELLDRYHSHTVNCASCSAAL 412
>gi|37962886|gb|AAR05797.1| accelerated cell death 1 [Arabidopsis thaliana]
Length = 537
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 226/507 (44%), Gaps = 82/507 (16%)
Query: 64 SAEERRGERQV--------ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG 115
S EE+R E + +++ W + WYP+ L +D+ + P + + +VL+ D N
Sbjct: 61 STEEKRIEEEYGGDKEEEGSEFKWRDHWYPVSLVEDLVPNVPTPFQLLGRDLVLWFDRND 120
Query: 116 E-LRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA------K 167
+ + D CPHRLA LSEG+L + G L+C YHGW F G G C +IPQ K
Sbjct: 121 QKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVK 180
Query: 168 IPRSACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELP 222
PR AC + SQG+++VW + P +LP ++F +P F V+ +L
Sbjct: 181 SPR-ACAIKFPTMVSQGLLFVWPDENGWDRANSIEPPRLP--DDFDKPEFSTVTIQRDLF 237
Query: 223 YDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLP 282
Y + L+EN+ DP+HI +H + T +R+ A+PL F+V GF G D P
Sbjct: 238 YGYDTLMENVSDPSHIDFAHHKV--TGRRDRAKPLPFKVESSGPWGFQ---GANDDSPRI 292
Query: 283 NFLRFEAPCVLQNNRELVDSK---TGEKHYFTGLFLCR---PTGQGKSMLIV-----RFG 331
+F APC N EL D+K G + + +++C P GK+ IV F
Sbjct: 293 T-AKFVAPCYSMNKIEL-DAKLPIVGNQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQ 348
Query: 332 ATKRSPL-AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLR------ 384
+ P ++ P+WY H ++ V++ DM L Q +V + +++ + + +N +
Sbjct: 349 FSVPGPAWWQVVPRWYEHWTSNLVYDGDMIVLQGQEKVFLAKSMESPDYDVNKQYTKLTF 408
Query: 385 ---SSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKG 441
+D +V +R W+ + G P FG ST S +P+ V
Sbjct: 409 TPTQADRFVLAFRNWLRRHGKSQPEWFG-STPSNQPLPSTV------------------- 448
Query: 442 AIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAF 501
+ + +R+ +H C C +F K L A + S Q +
Sbjct: 449 ----LTKRQMLDRFDQHTQVCSSCKGAYNSFQILKKFLVGATVFWAATAGVPSDVQIR-L 503
Query: 502 CLASASLCLAGVYACSTAIAMNTTNFI 528
LA SL A A + A+ NF+
Sbjct: 504 VLAGLSLISA---ASAYALHEQEKNFV 527
>gi|254409954|ref|ZP_05023734.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
gi|196182990|gb|EDX77974.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
Length = 446
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/438 (30%), Positives = 203/438 (46%), Gaps = 66/438 (15%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSEGQ 135
+D TE WYP++ KD+ P T+ + +V++ D + R + D+CPHRLA LS+G+
Sbjct: 5 FDHTEAWYPVHYLKDLDQSQPTQFTLLGRDLVIWWDKVADRWRVFDDQCPHRLAPLSQGR 64
Query: 136 LI-DGRLECLYHGWQFEGEGKCVKIPQLPAD--AKIPRSACVRTYEVKESQGVVWVWMSQ 192
+ DG LEC YHGW F G G C +IPQ D A+ + ACV E QG+++V+
Sbjct: 65 IAEDGLLECPYHGWAFTGAGTCDRIPQQTEDSSAQTSQRACVTALPTTECQGLLFVY--- 121
Query: 193 KTPPNPD-----KLPWFE--NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
P NP+ K+P E + + G+ + T +LPYD LLEN++D +H+P +H R+
Sbjct: 122 --PGNPENAPNVKVPIVEPLDDSPEGWVCIDTFRDLPYDALTLLENVLDVSHVPFTHHRS 179
Query: 246 DWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSK 303
+ R A P+ EVTE +GF G W G K F AP ++ ++ L +
Sbjct: 180 --VSDRAYASPVELEVTESGKQGFKGVWEQGPRKGTLGRQDTTFLAPTLMWHD--LTSKQ 235
Query: 304 TGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPL----AKLFPKWYFHQNASKVFEQDM 359
G + P +G+ L RF S L KL P+WY H + V E D
Sbjct: 236 FGRT---MTVVYATPIRKGECRLFARFPFKFASKLPGFFIKLTPRWYSHIGQNGVLEDDQ 292
Query: 360 GFLSSQNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLP 416
FL Q L + +K YL + +D +V E R+W+++ + P+ P
Sbjct: 293 IFLHYQEHYLESKGGSANFSKAFYLPTK-ADRFVFELRQWVNQY-NADPF------TDQP 344
Query: 417 KVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWK 476
P + + L +RY H + CK CS+ + +
Sbjct: 345 LPPRLSQE-------------------------TLLDRYHSHTVKCKSCSTALVRIRQIR 379
Query: 477 NSLSVVAA-ALTVLAILA 493
++VV A A ++ +LA
Sbjct: 380 RWVAVVGAMAWAIIPLLA 397
>gi|255565489|ref|XP_002523735.1| pheophorbide A oxygenase, putative [Ricinus communis]
gi|223537039|gb|EEF38675.1| pheophorbide A oxygenase, putative [Ricinus communis]
Length = 531
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 138/503 (27%), Positives = 218/503 (43%), Gaps = 87/503 (17%)
Query: 58 VLVGPASAEERRGERQVAD----------YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQI 107
V P+ + E+ E +V D + W + WYP+ L +D+ P + + +
Sbjct: 50 VAAPPSPSVEKEEEYRVDDESGQESVDSKFSWRDHWYPVSLVEDLDPGLPTPFQLLGRDL 109
Query: 108 VLYKDG-NGELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD 165
VL+ D N E D+CPHRLA LSEG++ + G L+C YHGW F+G G C +IPQ +
Sbjct: 110 VLWFDTTNQEWVALDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQAMPE 169
Query: 166 A------KIPRSACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQD 214
K PR AC + SQG+++VW + P LP +NF +P F
Sbjct: 170 GPEARAVKSPR-ACATRFPTMVSQGLLFVWPDENGWERARASKPPMLP--DNFDKPEFST 226
Query: 215 VSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWG 274
V+ +L Y + L+EN+ DP+HI +H + T +R+ A+PL F++ GFAG
Sbjct: 227 VTIQRDLFYGYDTLMENVSDPSHIDFAHHKV--TGRRDRAKPLAFKLEGSGPWGFAG--- 281
Query: 275 KEKDEPLPNF-LRFEAPCVLQNNRELVDSK---TGEKHYFTGLFLCR---PTGQGKSMLI 327
+E P +F APC N E +D+K G++ + +++C P GK+ I
Sbjct: 282 --ANEGNPRISAKFVAPCYYINKIE-IDTKLPIVGDQKWV--IWICSFNVPMAPGKTRSI 336
Query: 328 VRFGATKRSPLA---------KLFPKWYFHQNASKVFEQDMGFLSSQNEVLM---KETVP 375
V + R+ L ++ P+W+ H ++KV++ DM L Q ++ + KE
Sbjct: 337 V---CSARNFLQFTMPGPAWWQVVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSESKEGSN 393
Query: 376 TKELYLNL----RSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVA 431
E Y L +D +V +R W+ + G+ P F
Sbjct: 394 VNEQYTKLTFTPTQADRFVLAFRNWLRRHGNSQPEWF----------------------- 430
Query: 432 GVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAI 491
P I + + +R+ +H C C AF T + L A + A
Sbjct: 431 SFDGQQPLPSTI--LSKRQMLDRFEQHTNKCSSCRKAYTAFRTLQKLLIGATVAFSATAG 488
Query: 492 LASGRQWKAFCLASASLCLAGVY 514
+ S + A L VY
Sbjct: 489 IPSDLNLRIILAGLAILSAVSVY 511
>gi|126656429|ref|ZP_01727690.1| hypothetical protein CY0110_22037 [Cyanothece sp. CCY0110]
gi|126622115|gb|EAZ92822.1| hypothetical protein CY0110_22037 [Cyanothece sp. CCY0110]
Length = 466
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 193/431 (44%), Gaps = 55/431 (12%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRC-YQDRCPHRLAKLSEGQ 135
+DW E WYP++ +D+ P T+ ++ IV++ D C + D+CPHRLA LSEG+
Sbjct: 24 FDWKEVWYPVHYIEDLDKTKPTSFTLLEKNIVIWWDKKNSQWCVFDDQCPHRLAPLSEGR 83
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQ 192
+ + G LEC YHGW F G+G C IPQ + +S A V TY K +QG+++V+ +
Sbjct: 84 INESGCLECPYHGWAFSGQGNCEVIPQQKPEGNAEQSPRASVNTYSTKVAQGLLFVYAGK 143
Query: 193 KTPPNPDKLPWFENFARPGFQDV--STIHELPYDHSILLENLMDPAHIPISHDRTDWTAK 250
+P + + V +T ++PYD L+EN++D +HIP +H ++
Sbjct: 144 TENAAKTPIPLVDVLEESSREWVCLNTFRDIPYDALTLMENVLDSSHIPYTHHKS--VGN 201
Query: 251 REDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH 308
R + P+ EV E GF G W G K F AP ++ + +L + G
Sbjct: 202 RSNVSPVDLEVVESGKWGFKGVWEEGPRKGTLGKQTTHFFAPGMMYH--DLTSKQFGRT- 258
Query: 309 YFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGFLSS 364
+ P +GK L RF SP+ K F P+WY H + V E D FL
Sbjct: 259 --LTVVYATPISKGKCRLFARFPFKFCSPIPKFFINLTPRWYSHIGQNGVLEDDQIFLHY 316
Query: 365 QNEVLMKE---TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAV 421
Q L K+ + +K YL + +D +V + W+++ + P+ P
Sbjct: 317 QERYLEKKGGSSNVSKAFYLPTK-ADLFVFQLHSWINQYQAQL----------FPEQPL- 364
Query: 422 VEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSV 481
SPA + + L +RY H C C + +K K +SV
Sbjct: 365 ---------------SPA------LSSETLLDRYHSHTKDCSSCRTALKNIQRIKIGVSV 403
Query: 482 VAAALTVLAIL 492
+ + L ++
Sbjct: 404 ATSLIWSLIVI 414
>gi|427729894|ref|YP_007076131.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427365813|gb|AFY48534.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 469
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/433 (30%), Positives = 189/433 (43%), Gaps = 67/433 (15%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRLAKLSEGQ 135
+DW E WYP++ +D+ P T+ ++ IVL+ D N + R + D+CPHRLA LSEG+
Sbjct: 27 FDWQEVWYPVHYVEDLDKSQPTRFTLLERDIVLWWDKNEQTWRAFADQCPHRLAPLSEGR 86
Query: 136 LI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVW--- 189
+ DG LEC YHGW F G GKC +IPQ A K S ACV + QG+++V+
Sbjct: 87 INEDGWLECPYHGWAFSGTGKCERIPQQAAGDKAETSLRACVNSLPTTVRQGLLFVYPGR 146
Query: 190 ---MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 246
+Q T P D L E A G+ ++T ++PYD L+EN++D +HIP +H RT
Sbjct: 147 AENAAQTTVPIVDAL---EEDAD-GWVCLNTFRDIPYDALTLMENVLDSSHIPYTHHRT- 201
Query: 247 WTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKT 304
R + P+ EV E GF G W G K F AP ++ + +L +
Sbjct: 202 -VGNRANVSPVNLEVVESGKWGFKGIWEEGPRKGTLGKQDTTFIAPGLMWH--DLTSKQF 258
Query: 305 GEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMG 360
G + P +G+ L RF S + LF P+WY H + V E D
Sbjct: 259 GRT---LTVVYATPIRKGECRLFARFPFKFSSKIPGLFIKLTPRWYSHIGQNGVLEDDQI 315
Query: 361 FLSSQNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPK 417
FL Q L + K YL + +D +VA+ W + H P+
Sbjct: 316 FLHYQERYLEQRGGSANLNKAFYLPTK-ADAFVAQLHSWRQQY-HAEPF----------- 362
Query: 418 VPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKN 477
P + + L +RY H C C + +K F
Sbjct: 363 --------------------PGQTLTPPLTKEALLDRYHSHTKQCASCRTALKNF----Q 398
Query: 478 SLSVVAAALTVLA 490
L V TVLA
Sbjct: 399 RLRVGVGIATVLA 411
>gi|378830101|gb|AFC61176.1| lethal leaf spot1 [Triticum aestivum]
Length = 523
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 211/473 (44%), Gaps = 74/473 (15%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLAKLSEGQ 135
+ W + WYP+ L +D+ P + ++ +V++ D N G+ DRCPHRLA LSEG+
Sbjct: 70 FVWRDHWYPVSLVEDLDPRVPTPFQLLNRDLVIWNDPNSGDWVALDDRCPHRLAPLSEGR 129
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVW 189
+ + G L+C YHGW F+G G C +IPQ + R+ AC + SQG+++VW
Sbjct: 130 IDETGGLQCSYHGWSFDGSGACTRIPQAAPEGPEARAVRSPRACATKFPTLLSQGLLFVW 189
Query: 190 MSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 244
+ P LP + F P F V+ +L Y + L+EN+ DP+HI +H +
Sbjct: 190 PDENGWDKAKATKPPMLP--KEFDDPAFSTVTIQRDLFYGYDTLMENVSDPSHIEFAHHK 247
Query: 245 TDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSK- 303
T +R+ A+PL F++ G++ G P FEAPC N E +D+K
Sbjct: 248 V--TGRRDRAKPLPFKMESSGAWGYS---GANTGNPRIT-ATFEAPCYALNKIE-IDTKL 300
Query: 304 --TGEKHYFTGLFLCR---PTGQGKSMLIV-------RFGATKRSPLAKLFPKWYFHQNA 351
G++ + +++C P GK+ IV +F ++ +L P+WY H +
Sbjct: 301 PIVGDQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFTMPGKA-WWQLVPRWYEHWTS 357
Query: 352 SKVFEQDMGFLSSQNEVLM----KETVPTKELYLNL----RSSDTWVAEYRKWMDKVGHG 403
+ V++ DM L Q +V + + + + Y L +D +V +R W+ K G+
Sbjct: 358 NLVYDGDMIVLQGQEKVFLSASKESSADVNQQYTKLTFTPTQADRFVLAFRAWLRKFGNS 417
Query: 404 MPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGT--MHAPNLANRYFRHVIH 461
P +G SP++ A+ + + + +RY +H +
Sbjct: 418 QPDWYG---------------------------SPSQDALPSTVLSKREMLDRYEQHTLK 450
Query: 462 CKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVY 514
C C KAF T + + + + Q + A A + A Y
Sbjct: 451 CSSCRGAHKAFQTLQKVFMGATVVFGATSGIPADVQLRILLGAGALISAALAY 503
>gi|1935912|gb|AAC49678.1| lethal leaf-spot 1 [Zea mays]
Length = 505
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 219/480 (45%), Gaps = 80/480 (16%)
Query: 50 TSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL 109
TS G+ P+++ GE+ + W + WYP+ L +D+ P + ++ +V+
Sbjct: 44 TSVPGEAAEQAEPSTSAPESGEK----FSWRDHWYPVSLVEDLDPSRPTPFQLLNRDLVI 99
Query: 110 YKD-GNGELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQ-LPA-- 164
+K+ +GE DRCPHRLA LSEG++ + G L+C YHGW F+G G C KIPQ +P
Sbjct: 100 WKEPKSGEWVALDDRCPHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTKIPQAMPEGP 159
Query: 165 DAKIPRS--ACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVST 217
+A+ RS AC + SQG+++VW + P LP + F P F V+
Sbjct: 160 EARAVRSPKACAIKFPTLVSQGLLFVWPDENGWEKAAATKPPMLP--KEFEDPAFSTVTI 217
Query: 218 IHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEK 277
+L Y + L+EN+ DP+HI +H + T +R+ A+PL F + G++G
Sbjct: 218 QRDLFYGYDTLMENVSDPSHIEFAHHKV--TGRRDRARPLTFRMESSGAWGYSG-----A 270
Query: 278 DEPLPNFL-RFEAPCVLQNNRELVDSKT---GEKHYFTGLFLCR---PTGQGKSMLIV-- 328
+ P FEAPC N E +D+K G++ + +++C P GK+ IV
Sbjct: 271 NSGNPRITATFEAPCYALNKIE-IDTKLPIFGDQKWV--IWICSFNIPMAPGKTRSIVCS 327
Query: 329 -----RFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTK------ 377
+F ++ +L P+WY H ++ V++ DM L Q ++ + T +
Sbjct: 328 ARNFFQFTMPGKA-WWQLVPRWYEHWTSNLVYDGDMIVLQGQEKIFLAATKESSTDINQQ 386
Query: 378 --ELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSA 435
++ +D +V R W+ K G+ P FG+ T +P+ V
Sbjct: 387 YTKITFTPTQADRFVLACRTWLRKFGNSQPEWFGNPTQE--ALPSTV------------- 431
Query: 436 SSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASG 495
+ + +RY + + C C AF +L V TV+ A+G
Sbjct: 432 ----------LSKREMLDRYEQLSLKCSSCKGAYNAF----QNLQKVFMGATVVCCAAAG 477
>gi|158336046|ref|YP_001517220.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
gi|158306287|gb|ABW27904.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
Length = 458
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 207/463 (44%), Gaps = 65/463 (14%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGNGELRCYQDRCPHRLAKLSEGQ 135
+++ ++WYP+ +D+ P +T+ Q V+++ +G+ +QD CPHRLA LSEG+
Sbjct: 16 FNFWQQWYPVAPLEDLDPQRPTPITLLGQHFVIWQPKDSGQYLVFQDLCPHRLAPLSEGR 75
Query: 136 LID--GRLECLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQ 192
+ D G+L C YHGWQF+ +G C IPQ A ++ + CV + G++WVW
Sbjct: 76 IDDQTGQLMCSYHGWQFDQQGLCTHIPQAEAVTSQQSQLYCVTVIPTQAHSGLLWVW--- 132
Query: 193 KTPPNPDK--------LPWF------ENFARPGFQDVSTIHELPYDHSILLENLMDPAHI 238
P+PD LP +NF F + +L YD L+ENL DP+H+
Sbjct: 133 ---PDPDTQDVAATQPLPLSPLVDADQNFVYSSF-----MRDLAYDWQTLVENLSDPSHV 184
Query: 239 PISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRE 298
P +H R A P+ EV T + + F+ PC ++
Sbjct: 185 PFAHHGVQ--GNRNQAAPIPMEVLTSTPELIE----VQTTGKFSTNITFQPPCRMEYQFS 238
Query: 299 LVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQ-NASKVFEQ 357
+ D K T + C P G+S ++ F + L K+ P+W H N + V +
Sbjct: 239 IGDGKQA-----TMVTYCIPIAPGRSRIVALFARNFATGLMKVIPRWVEHMLNRNPVLDG 293
Query: 358 DMGFLSSQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKWMDKVGHG-MPYHFGHSTIS 414
DM L SQ + L++ T + Y S+D V EYR+W +K HG +P+ G +
Sbjct: 294 DMILLRSQEKQLLQHTQTQNWQTTYKLPTSADRLVIEYRRWFEKYSHGQIPW--GSADGQ 351
Query: 415 LPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFST 474
+P V++++ A P L +RY +H + C C +
Sbjct: 352 IP----------------VASNNYAYLQPLGEQRPQLLDRYHQHTLICSSCRGALSRIKQ 395
Query: 475 WKNSL-SVVAAALTVLAILASGRQ--WKAFCLASASLCLAGVY 514
+ L +V A A++ AIL + W + +A L L G Y
Sbjct: 396 LQKMLVAVFAIAISGAAILPDDLRATWGIPLVITALLGLGGCY 438
>gi|116780249|gb|ABK21605.1| unknown [Picea sitchensis]
Length = 180
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/135 (58%), Positives = 97/135 (71%), Gaps = 8/135 (5%)
Query: 31 SLNKTPKSRKCHAVTDRSSTSTV---GDHKVLVGPASAEERRGERQVADYDWTEEWYPLY 87
S+N P + KC + ST+ D ++L+ R E Y+W EWYPLY
Sbjct: 49 SVNCHPFNAKCRMRAEAMSTARTLESEDGEILIKEEGPLYNRNE-----YNWENEWYPLY 103
Query: 88 LTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHG 147
L +VP DAPLGLTVFD+Q+VLY+DGNG L+CY+DRCPHR AKLSEGQL++GRLECLYHG
Sbjct: 104 LAAEVPKDAPLGLTVFDKQLVLYEDGNGVLQCYEDRCPHRAAKLSEGQLMEGRLECLYHG 163
Query: 148 WQFEGEGKCVKIPQL 162
WQFEG+GKCVKIPQ+
Sbjct: 164 WQFEGDGKCVKIPQV 178
>gi|307107873|gb|EFN56114.1| hypothetical protein CHLNCDRAFT_51738 [Chlorella variabilis]
Length = 553
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 177/436 (40%), Gaps = 73/436 (16%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLID 138
W ++WYP+ + D+P D P T+F +Q+VL++D G RC+QD CPHRLA LSEG++++
Sbjct: 83 WLQQWYPVAVAADLPTDRPHPFTLFGRQLVLWRDAAGAWRCFQDACPHRLAPLSEGRVVE 142
Query: 139 GRLECLYHGWQFEGEGKCVKIPQL-----PADAKIPRSACVRTYEVKESQGVVWVW---- 189
G+L C YHGW FEG GKC ++PQ A A R AC T E+ G+VWVW
Sbjct: 143 GQLVCSYHGWSFEGTGKCTRVPQAMDERSEAAACGSRRACAATQPTAEAAGLVWVWPDAS 202
Query: 190 -------MSQKTPPNPDKL----PWFENFARPGFQDVST---IHELPYDHSILLENLMDP 235
+ P +PD L F ++ + E PY ++EN++DP
Sbjct: 203 PGAPEQAAAAPLPVHPDLLAGGAGGGATPGSGSFVNIGGGWLVRECPYGFDTMIENILDP 262
Query: 236 AHIPISHDRTDWTAKREDAQPLGFEVTERT--DRGFAGRWG--KEKDEPLPNFLRFEAPC 291
H+ + +REDA P ++ + GFA G K E L F PC
Sbjct: 263 GHVMWAPHGL--LGRREDAVPYAVKLQGEISLEGGFATSLGASSRKLEVQRRSLEFRPPC 320
Query: 292 VLQNN---RELVDSKTG------EKHYFTGLFLCR---PTGQGKSMLIVR------FGAT 333
++ EL TG + L C P+ G +L+ GA
Sbjct: 321 FVRQTIAPGELGPGPTGWLPPCHAPSKGSSLVTCGYAVPSRPGHCLLVTTSYAEAGSGAG 380
Query: 334 KRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEY 393
L P+W H +V + D+ L Q L K + + SD V +
Sbjct: 381 GLRAALGLVPRWLLHVYTQEVLDGDLILLHGQERRLEKAGGSWRSAFFMPTPSDGAVVAF 440
Query: 394 RKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLAN 453
R+W D + G+ LP E L +
Sbjct: 441 RRWFDDMAGGVGGLPWAGGGGLPPEEESKE--------------------------KLLD 474
Query: 454 RYFRHVIHCKGCSSVI 469
R +H HC CS+ +
Sbjct: 475 RLHQHTQHCPSCSAAL 490
>gi|1935914|gb|AAC49679.1| lethal leaf-spot 1 homolog, partial [Arabidopsis thaliana]
Length = 539
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 221/492 (44%), Gaps = 74/492 (15%)
Query: 71 ERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLA 129
E + +++ W + WYP+ L +D+ + P + + +VL+ D N + + D CPHRLA
Sbjct: 78 EEEGSEFKWRDHWYPVSLVEDLVPNVPTPFQLLGRDLVLWFDRNDQKWAAFDDLCPHRLA 137
Query: 130 KLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACVRTYEVKES 182
LSEG+L + G L+C YHGW F G G C +IPQ K PR AC + S
Sbjct: 138 PLSEGRLDENGHLQCSYHGWSFGGCGSCTRIPQAATSGPEARAVKSPR-ACAIKFPTMVS 196
Query: 183 QGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 237
QG+++VW + P +LP ++F +P F V+ +L Y + L+EN+ DP+H
Sbjct: 197 QGLLFVWPDENGWDRANSIEPPRLP--DDFDKPEFSTVTIQRDLFYGYDTLMENVSDPSH 254
Query: 238 IPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNR 297
I +H + T +R+ A+PL F+V GF G D P +F APC N
Sbjct: 255 IDFAHHKV--TGRRDRAKPLPFKVESSGPWGFQ---GANDDSPRIT-AKFVAPCYSMNKI 308
Query: 298 ELVDSK---TGEKHYFTGLFLCR---PTGQGKSMLIV-----RFGATKRSPL-AKLFPKW 345
EL D+K G + + +++C P GK+ IV F + P ++ P+W
Sbjct: 309 EL-DAKLPIVGNQKWV--IWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVPRW 365
Query: 346 YFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLR---------SSDTWVAEYRKW 396
Y H ++ V++ DM L Q +V + +++ + + +N + +D +V +R W
Sbjct: 366 YEHWTSNLVYDGDMIVLQGQEKVFLAKSMESPDYDVNKQYTKLTFTPTQADRFVLAFRNW 425
Query: 397 MDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYF 456
+ + G P FG ST S +P+ V + + +R+
Sbjct: 426 LRRHGKSQPEWFG-STPSNQPLPSTV-----------------------LTKRQMLDRFD 461
Query: 457 RHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYAC 516
+H C C +F K L A + S Q + LA SL A A
Sbjct: 462 QHTQVCSSCKGAYNSFQILKKFLVGATVFWAATAGVPSDVQIR-LVLAGLSLISA---AS 517
Query: 517 STAIAMNTTNFI 528
+ A+ NF+
Sbjct: 518 AYALHEQEKNFV 529
>gi|18416592|ref|NP_567725.1| ACD1-like protein [Arabidopsis thaliana]
gi|15983402|gb|AAL11569.1|AF424575_1 AT4g25650/L73G19_30 [Arabidopsis thaliana]
gi|15810259|gb|AAL07017.1| unknown protein [Arabidopsis thaliana]
gi|37962888|gb|AAR05798.1| LLS1-like protein [Arabidopsis thaliana]
gi|332659688|gb|AEE85088.1| ACD1-like protein [Arabidopsis thaliana]
Length = 536
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 204/485 (42%), Gaps = 90/485 (18%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLAKLSEGQ 135
+DW WYP+ D+ P G V +V++ D N + + D CPHRLA LS+G+
Sbjct: 79 FDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGR 138
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKESQGVVWVWMS 191
+ GRL+C+YHGW F G G C IPQ P D + ACV Y ++W W +
Sbjct: 139 IDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFWPN 198
Query: 192 Q----KTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH----- 242
K +K P+ P F + ++PY + +L+ENLMDPAH+P +H
Sbjct: 199 SDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYGLMR 258
Query: 243 -DRTDWTAKREDAQPLGFEVTERTDRGFAGR--WGKEKDEPLPNFLRFEAPCVLQNNREL 299
+ RE +PL V + ++GF + WG + F APCV +++ +
Sbjct: 259 FPKPKEKIDREGGKPLEINVKKLDNKGFFSKQEWG---------YSNFIAPCVYRSSTDP 309
Query: 300 VDSKTGE-------------KHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWY 346
+ + E K + +F+C P G+S LI F + K+ P+W
Sbjct: 310 LPEQEHEYPAPAASDKAALSKRRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPRWV 369
Query: 347 FHQNASKVFEQDMGFLSSQNEVLMKET---------VPTKELYLNLRSSDTWVAEYRKWM 397
FH + + + D+ L + +++ +PTK SD V +R+W
Sbjct: 370 FHIGQNTILDSDLHLLHVEERKILERGPENWQKACFIPTK--------SDANVVTFRRWF 421
Query: 398 DKVGHG-MPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYF 456
+K + + LP P + L +RY+
Sbjct: 422 NKYSEARVDWRGKFDPFLLPPTPPREQ---------------------------LFDRYW 454
Query: 457 RHVIHCKGCSSVIKAFSTWKNSLSVV--AAALTVLAILASGRQWKAFCLASASLCLAGVY 514
HV +C C K N+L V+ A++ ++ ++A +Q +A ++ +A V
Sbjct: 455 SHVENCSSCKKAHKYL----NALEVILQIASVAMIGVMAVLKQTTMSNVARIAVLVAAVL 510
Query: 515 ACSTA 519
+ + +
Sbjct: 511 SFAAS 515
>gi|254412665|ref|ZP_05026438.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
gi|196180400|gb|EDX75391.1| Pheophorbide a oxygenase family [Coleofasciculus chthonoplastes PCC
7420]
Length = 443
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 200/437 (45%), Gaps = 66/437 (15%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-ELRCYQDRCPHRLAKLSE 133
+++++ ++WYPL +D+ P +TV ++V++K + R + D+CPHRLA LSE
Sbjct: 3 SEFNFFQQWYPLSPVEDLDPKQPTPVTVLGLRLVIWKPPSSPTYRVFLDQCPHRLAPLSE 62
Query: 134 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWV 188
G++ + G L C YHGWQF +G C IPQ + + CV+T + ++WV
Sbjct: 63 GRVDEKTGNLVCSYHGWQFNSQGICTHIPQAETPQIVTNNQDNICVQTLPCCQENDLLWV 122
Query: 189 WMSQKTP------PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
W+ +P P P P + A GF S + +L YD L+EN+ DP+H+P +H
Sbjct: 123 WLDANSPELAAATPRPLS-PQVD--ASKGFVWSSMVRDLDYDWQTLVENIADPSHVPFAH 179
Query: 243 DRTDWTAKREDAQPLGFEVTE----RTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRE 298
R+ AQP+ E+ + R + GR+ + + FE PC L+
Sbjct: 180 HGVQ--GNRDQAQPIAIEIVQSTANRIEGNTVGRFNTK--------MTFEPPCHLEYAIS 229
Query: 299 LVDSKTGEKHYFTGLF-LCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASK-VFE 356
G+K GL C P GKS ++ +F L++L P+W+ H V +
Sbjct: 230 F-----GDKGQQVGLVTYCIPVAPGKSRIVAQFPRNFAKSLSRLTPRWWNHITVRNLVLD 284
Query: 357 QDMGFLSSQNEVL-MKETVPT-KELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTIS 414
DM L Q L +++V + K Y L S+D +V E+RKW DK G +
Sbjct: 285 GDMILLHQQERFLQQRQSVESWKTAYKLLTSADRFVIEFRKWFDKYCQG----------T 334
Query: 415 LPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFST 474
LP V +S +I + + +RY +H HC+ CS+ +K
Sbjct: 335 LPW-------------KQVGLNSSDTISIND-NRQEVLDRYRQHTQHCRSCSAALKTV-- 378
Query: 475 WKNSLSVVAAALTVLAI 491
L VV VL +
Sbjct: 379 --QRLQVVLLGGFVLTV 393
>gi|41469410|gb|AAS07233.1| putative iron-sulfur cluster-binding protein [Oryza sativa Japonica
Group]
Length = 552
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 206/489 (42%), Gaps = 82/489 (16%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG--ELRCYQDRCPHR 127
G + ++W ++WYP+ D+ P G V ++V + DG G E R D CPHR
Sbjct: 78 GGGEEGRFEWLDQWYPVAPVCDLDPRKPHGKMVMGLRVVAWFDGGGGGEWRVVDDACPHR 137
Query: 128 LAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSACVRTYEVKESQ 183
LA LSEG++ GRL+C YHGW F+G G C IPQ PA ACV +Y
Sbjct: 138 LAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIPQAPALGPPVHKNSKACVASYPSVVQN 197
Query: 184 GVVWVW----------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLM 233
++W + + +K PP +F + P F V + +L Y + +L+ENLM
Sbjct: 198 NILWFYPRSEPEYKEILQRKRPP------YFPDLDDPSFNTVFGVRDLFYGYDVLVENLM 251
Query: 234 DPAHIPISHDRTDWTAKREDA----------------QPLGFEVTERTDRG-FAGRWGKE 276
DPAH+P +H +ED Q G+ V RT++ G +
Sbjct: 252 DPAHVPYAHKGLMPIQNKEDPGRYCSTVHLLSTVESDQEGGYPVKIRTEQAKIDGFLSVQ 311
Query: 277 KDEPLPNFLRFEAPCVL------QNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRF 330
+D+ +++F+APC L ++ + K ++ +FLC P G+S LI F
Sbjct: 312 EDDVC--YMKFDAPCTLYGKPFRTKEPQVSEKKKKKQPEAMTVFLCVPVAPGRSRLIWAF 369
Query: 331 GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT--KELYLNLRSSDT 388
+ L + P+W +H + V + D L + + K Y+ SSD
Sbjct: 370 PRNVDAWLDNIIPRWLYHIVTNIVLDSDSYLLHIEERNFATVGLDNWHKACYVPT-SSDN 428
Query: 389 WVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHA 448
V +R W K + G +T ++P +P K +
Sbjct: 429 MVITFRNWFRKYCK---HQIGWATPMANQLP----------------PTPTKDQV----- 464
Query: 449 PNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQW-----KAFCL 503
RY HV+ C CS+ +K + +L V + A+ +A G +A +
Sbjct: 465 ---LERYRSHVMQCTSCSAALKKMKALEVALQVASVAIVGFLAVAKGSLAPSVVRRAAAV 521
Query: 504 ASASLCLAG 512
++A LC A
Sbjct: 522 STAVLCFAA 530
>gi|162568918|gb|ABY19385.1| pheophorbide A oxygenase 2 [Nicotiana tabacum]
Length = 531
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 212/450 (47%), Gaps = 73/450 (16%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQDRCPHRLAKLSEGQ 135
+ W + WYP+ L +D+ + P + ++ +VL+ D + + + D+CPHRLA LSEG+
Sbjct: 78 FSWRDHWYPVSLAEDLDPNLPTPFQLLNRDLVLWFDKSSSQWVAFDDKCPHRLAPLSEGR 137
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACVRTYEVKESQGVVWV 188
+ + G L+C YHGW F G G C +IPQ ++ + PR AC + SQG+++V
Sbjct: 138 IDENGDLQCSYHGWSFNGCGSCTRIPQAASEGPEAKAVQSPR-ACATRFPTMVSQGLLFV 196
Query: 189 WMSQKT-----PPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
W + P LP E+F +P F V+ +L Y + L+EN+ DP+HI +H
Sbjct: 197 WPDENAWERAQATKPPMLP--EDFDKPEFATVTIQRDLFYGYDTLMENVSDPSHIDFAHH 254
Query: 244 RTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSK 303
+ T +R+ A+PL F++ GFA G D+P +F APC N E +D+K
Sbjct: 255 KV--TGRRDRAKPLPFKMEASGPWGFA---GANNDKPKIT-AKFVAPCYSMNKIE-IDTK 307
Query: 304 ---TGEKHYFTGLFLCR---PTGQGKSMLIV-----RFGATKRSPL-AKLFPKWYFHQNA 351
G++ + +++C P GK+ IV F T P ++FP+W H +
Sbjct: 308 LPIVGDQKWV--IWICSFNVPMAPGKTRSIVCSARNFFQFTVPGPAWWQVFPRWQEHWTS 365
Query: 352 SKVFEQDMGFLSSQNEVLMKETVPTK--------ELYLNLRSSDTWVAEYRKWMDKVGHG 403
+KV++ DM L Q ++ + ++ +L +D +V +R W+ + G+
Sbjct: 366 NKVYDGDMIVLQGQEKIFLAKSKENSTDVNKEYTKLTFTPTQADRFVLAFRNWLRRHGNS 425
Query: 404 MPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCK 463
P FG+ + +P+ V + + +R+ +H + C
Sbjct: 426 QPEWFGN--VDQQPLPSTV-----------------------LSKRQMMDRFEQHTLKCS 460
Query: 464 GCSSVIKAFSTWKNSLSVVAAALTVLAILA 493
C + A+ T++ ++ A+ V A
Sbjct: 461 SCRN---AYYTFERLHKILIGAVVVFCATA 487
>gi|88809638|ref|ZP_01125145.1| hypothetical protein WH7805_00500 [Synechococcus sp. WH 7805]
gi|88786388|gb|EAR17548.1| hypothetical protein WH7805_00500 [Synechococcus sp. WH 7805]
Length = 440
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 182/412 (44%), Gaps = 62/412 (15%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG-NGELRCYQDRCPHRLAKLSEGQLI 137
WTE+W+P+ +D+ P T+ ++ +VL+ DG N R + D CPHRL LSEG++
Sbjct: 5 WTEQWWPVAYLRDLDPGKPQRFTLLERDLVLWWDGVNSTWRAFNDVCPHRLVPLSEGRIN 64
Query: 138 D-GRLECLYHGWQFEGEGKCVKIPQL--PADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
G LEC YHGW F GEG C +IPQ+ A+ RS C + + +QG+++VW
Sbjct: 65 SAGDLECPYHGWSFNGEGHCTRIPQMGDAGRARGRRSNCA-SLPTRSAQGLLFVWSGDPE 123
Query: 195 PPNPDKLPWFENFARPG--------FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 246
+ LP + G QD T +LP D LLEN++D +H+P +H +T
Sbjct: 124 KAESNDLPLVPSLQEEGDGWADGWIVQD--TFRDLPMDALTLLENVLDVSHVPFTHHKT- 180
Query: 247 WTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKT 304
KRE+A P+ + D GF W G + F F+AP ++ ++ +D+K
Sbjct: 181 -VGKRENAAPVLAVIQSEDDSGFEAVWDEGPRRGRLGSQFTHFKAPQLMWHD---LDAK- 235
Query: 305 GEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAK----LFPKWYFHQNASKVFEQDMG 360
G T ++ P +G+ L RF +S L K L P+W H KV E D
Sbjct: 236 GFARILTVVYAV-PIRRGQCRLFARFPFQFKSALPKVVVGLRPRWLQHIGNHKVLEDDQV 294
Query: 361 FLSSQNEVLMKE--TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKV 418
FL Q VL + + + +D +VA +W++ H G P
Sbjct: 295 FLHWQERVLESAGGSAGAERAFFLPTEADVYVAALHRWINN-------HGGEPFAGQPLP 347
Query: 419 PAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIK 470
P L +RY H +HC+ CS ++
Sbjct: 348 P-------------------------RQEVDALMDRYHSHTVHCRSCSQALR 374
>gi|224056994|ref|XP_002299108.1| predicted protein [Populus trichocarpa]
gi|222846366|gb|EEE83913.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 202/486 (41%), Gaps = 85/486 (17%)
Query: 67 ERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCP 125
E + Q +DW WYP+ D+ AP V IV++ D N R + + CP
Sbjct: 14 ELEADSQAEKFDWYAHWYPVMPVCDLDKRAPHAKKVMGLDIVVWWDKNESSWRVFNNACP 73
Query: 126 HRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKE 181
HR+A LSEG++ GRL+C+YHGW F G G C IPQ P D + ACV Y
Sbjct: 74 HRMAPLSEGRVDQWGRLQCVYHGWCFNGSGNCNFIPQAPTDGPPVSTSKKACVAVYPSTV 133
Query: 182 SQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSILLEN 231
+VW W PN D + P+ P + ++ +LPY + +L+EN
Sbjct: 134 HHDIVWFW------PNTDPQYKDIILKKQPPFIPELDDPSYIKITGSRDLPYGYEVLIEN 187
Query: 232 LMDPAHIPISHDRTDWT----------AKREDAQPLGFEVTERTDRGFAGRWGKEKDEPL 281
LMDPAH+P +H T A RE P+ + + GF G ++
Sbjct: 188 LMDPAHVPYAHYGIMRTRQPKGILRLKADREGGSPVELSIKKLDIDGFIG------NQVQ 241
Query: 282 PNFLRFEAPC---------VLQNNRELVDS--KTGEKHYFTGLFLCRPTGQGKSMLIVRF 330
+F APC V Q + + D+ K + +F C P G S LI
Sbjct: 242 FGINKFIAPCISYADSSPVVDQGDDAIADTEKKPSMQRREALIFFCVPVSPGNSRLIWAI 301
Query: 331 GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT--KELYLNLRSSDT 388
+AK+ P++ H + V + D+ L + +M+ K ++ + SD
Sbjct: 302 PKNYGVWIAKV-PRFIHHSVTNIVLDSDLYLLHLEERKIMEIGASNWQKACFVPAK-SDA 359
Query: 389 WVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHA 448
+V +RKW++K G G+ + +LP P +
Sbjct: 360 FVVGFRKWLNKYAGGQVDWRGNYSGTLPPTPPREQ------------------------- 394
Query: 449 PNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVA--AALTVLAILASGRQWKAFCLASA 506
L +RY+ HV++C C+S K N++ V+ A+L + I + + +A A
Sbjct: 395 --LLDRYWSHVVNCPSCNSAYKGL----NAVEVILQFASLAFIGIAGATKHNVYTMVAMA 448
Query: 507 SLCLAG 512
+C G
Sbjct: 449 VVCFVG 454
>gi|78213302|ref|YP_382081.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9605]
gi|78197761|gb|ABB35526.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9605]
Length = 456
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 204/452 (45%), Gaps = 70/452 (15%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQDRCPHRLAKLSEGQLI 137
WTE+W+P+ +D+ P T+ ++ +V++ D R + D CPHRL LSEG++
Sbjct: 27 WTEQWWPISYVQDLDPKTPSRFTLLERDLVIWWDRAASSWRVFPDVCPHRLVPLSEGRIN 86
Query: 138 D-GRLECLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKT 194
+ G LEC YHGW F+G+G+C ++PQ + + RS C + QG+++VWM
Sbjct: 87 EEGLLECPYHGWSFDGDGQCQRVPQALENTQPNNRRSRCA-SLPTATRQGLLFVWMGAPD 145
Query: 195 PPNPDKLPWFENFARPGFQD-------VSTIHELPYDHSILLENLMDPAHIPISHDRTDW 247
+P +LP P +D T +LP D LLEN++D +H+P +H +T
Sbjct: 146 AADPSQLPLV-----PALEDNPDSWTVQDTFRDLPMDAVTLLENVLDVSHVPFTHHKT-- 198
Query: 248 TAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
KRE+A P+ +T GF W G + + F AP ++ ++ + G
Sbjct: 199 VGKRENAAPVEASITGEDASGFTAYWEEGPRRGKLGAQSTTFHAPQLMWHDL----TAKG 254
Query: 306 EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGF 361
T ++ P +G+ L RF +S + +L P+W H KV E D F
Sbjct: 255 FGRILTVVYAV-PIRRGECRLFARFPFQFQSAVPRLLIGLRPRWLQHIGNHKVLEDDQVF 313
Query: 362 LSSQNEVLMKE--TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVP 419
L Q VL + + + + +SD +VA +W++ G G P+
Sbjct: 314 LHWQERVLERAGGSPAVERSFFMPTTSDVYVAALHRWLNGNG-GEPF------------- 359
Query: 420 AVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFST---WK 476
AG S+ A L +RY H IHC+ CSS +K T W
Sbjct: 360 -------AGQPLPPRQSTTA-----------LMDRYNSHTIHCRSCSSALKRIRTARPWA 401
Query: 477 NSLSVVAAALTVLAILASGRQWKAFCLASASL 508
+L +AAL L I G W + L +A+L
Sbjct: 402 WALLWGSAAL--LGI-QQGSAWNSTGLVTAAL 430
>gi|443314552|ref|ZP_21044102.1| Rieske (2Fe-2S) domain-containing protein [Leptolyngbya sp. PCC
6406]
gi|442785849|gb|ELR95639.1| Rieske (2Fe-2S) domain-containing protein [Leptolyngbya sp. PCC
6406]
Length = 474
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 205/465 (44%), Gaps = 55/465 (11%)
Query: 43 AVTDRSSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTV 102
A D T+ K+ P+ G +DW E WYP++ +D+ P T+
Sbjct: 3 ATQDAPRVQTLAPSKISTDPSPQALAPGGPDPDKFDWAEAWYPVHYVEDLDPQRPTRFTL 62
Query: 103 FDQQIVLYKDGNGEL-RCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIP 160
Q +V++ + + R + ++CPHRLA LSEG++ + G+LEC YHGW F G G C +IP
Sbjct: 63 LGQDLVIWWEPQAKAWRVFANQCPHRLAPLSEGRINEAGQLECPYHGWTFSGSGACEQIP 122
Query: 161 QLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENF-ARP-GFQDVS 216
Q + RS AC + QG+++V+ + +P E A P G+ ++
Sbjct: 123 QQSPETAAHRSPRACAHSLPTAVRQGLLFVYPGRVENAPQVPVPIIEAVEAEPEGWVMLN 182
Query: 217 TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRW--G 274
T +LPYD LLEN++D +HIP +H +T KRE+A P+ V + +GF G W G
Sbjct: 183 TFRDLPYDALTLLENVLDASHIPYTHHKT--VGKRENAAPMEMTVIDPGKQGFQGLWPEG 240
Query: 275 KEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATK 334
K + RF AP ++ ++ L + G + P +G+ L RF
Sbjct: 241 PRKGKLGTQSTRFVAPGLMYHD--LTSKQFGRT---LTVVYATPIRKGECRLFARFPFKF 295
Query: 335 RSPLAKLF----PKWYFHQNASKVFEQDMGFLSSQNEVLMKE-TVPTKELYLNLRSSDTW 389
SPL + F P+W H + V E D FL Q L + P + +D +
Sbjct: 296 SSPLPRFFIGVIPRWLSHIGNNGVLEDDQIFLHLQERFLAQAGDQPYAQTCYLPTQADRY 355
Query: 390 VAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAP 449
V +R+W+ + P+ + SLP E + A L+
Sbjct: 356 VTAFRQWVQQF-QADPF----AGESLPP-----EWSQAALL------------------- 386
Query: 450 NLANRYFRHVIHCKGCSSVIKAFSTWKN---SLSVVAAALTVLAI 491
+RY H HC C + ++ + +S +A +L L I
Sbjct: 387 ---DRYQSHTQHCGSCRTALRRIQQIRQVALGISAIAWSLIPLTI 428
>gi|119510320|ref|ZP_01629456.1| hypothetical protein N9414_16222 [Nodularia spumigena CCY9414]
gi|119465064|gb|EAW45965.1| hypothetical protein N9414_16222 [Nodularia spumigena CCY9414]
Length = 445
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 201/427 (47%), Gaps = 51/427 (11%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSE 133
+++++ ++WYPL +D+ P +T+ ++V++K + E + + D+CPHRLA LSE
Sbjct: 3 SEFNFFQQWYPLSPVEDIDPTRPTPVTLLGIRLVIWKPKSSETYQVFLDQCPHRLAPLSE 62
Query: 134 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWV 188
G++ + G L C YHGWQF+ +G C IPQ + ++ CV + V+++ ++WV
Sbjct: 63 GRVDEKSGNLMCSYHGWQFDSQGICTHIPQAEKPEIVTKNEKIFCVISLPVRQANDLLWV 122
Query: 189 WMSQKTPPNPDKLPW---FENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
W + P + A G+ S + +L YD L+EN+ DP+H+P +H
Sbjct: 123 WPDANSAEAAANTPLPLSPQVDADKGYVWSSYVRDLEYDWETLVENVADPSHVPFTHHGV 182
Query: 246 DWTAKREDAQPLGFEVTERTDRGF-AGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKT 304
KRE A P+ EV + T + A G+ K + FE PC L+ L DS
Sbjct: 183 Q--GKREYATPIPMEVVQSTSKLIEAMTSGRFKTT-----ITFEPPCRLEYAINLGDS-- 233
Query: 305 GEKHYFTGLF-LCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASK-VFEQDMGFL 362
GEK GL C P GKS ++ +F L +L P+W+ H N V + DM L
Sbjct: 234 GEKK--VGLVTYCIPVSPGKSRIVAQFPRNFAKTLHRLTPRWWSHINTRNLVLDGDMIVL 291
Query: 363 SSQNEVL-MKETVPT-KELYLNLRSSDTWVAEYRKWMDKVGHG-MPYHFGHSTISLPKVP 419
Q L ++ V + K +Y S+D V E+R W DK G +P+ I++P P
Sbjct: 292 HQQENFLQQRQAVESWKTIYKLPTSADRLVIEFRNWFDKYCFGQLPW--SEVGITVPPSP 349
Query: 420 AVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSL 479
+ ++ L +RY +H HC C + +K + L
Sbjct: 350 QINDNRSV-----------------------LLDRYSQHTQHCSSCRNALKVIQRLQVGL 386
Query: 480 SVVAAAL 486
+ + ++
Sbjct: 387 LIYSTSI 393
>gi|428771008|ref|YP_007162798.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
gi|428685287|gb|AFZ54754.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
Length = 468
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 190/428 (44%), Gaps = 61/428 (14%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG-NGELRCYQDRCPHRLAKLSEGQ 135
+D+ E WYP++ D+ D P T+ D+ +V++ D + + R +QD CPHRLA LS G+
Sbjct: 28 FDYKEVWYPVFFVNDLHKDKPSRFTLLDEDLVIWWDKKDQQWRVFQDMCPHRLAPLSTGR 87
Query: 136 LI-DGRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKESQGVVWVWMS 191
+ DG LEC YHGW F G+G C IPQ P K PR ACV++Y + +++V+
Sbjct: 88 IDEDGLLECPYHGWTFSGKGDCQSIPQQPEGENRHKSPR-ACVKSYPSAIAHDMLFVYAG 146
Query: 192 QKT----PPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDW 247
+K P P P EN + + + T ++PYD LLEN++D +H+ +H T
Sbjct: 147 KKENAFLTPMPITQPLIENVEK--WTILKTFRDIPYDALTLLENVLDSSHVSYTHHGT-- 202
Query: 248 TAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
R +A P+ EV +GF G W G K + F AP ++ + +L + G
Sbjct: 203 VGNRSNAAPVELEVKTADRQGFTGFWAEGPRKGKLGSQSTTFIAPNLMWH--DLTSKQLG 260
Query: 306 EKHYFTGLFLCRPTGQGK----SMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGF 361
+ P +GK ++ +F + KL P+WY H N + + E D F
Sbjct: 261 RT---MTVVYVTPISKGKCRVFALFPFQFASKIPQFFIKLTPQWYSHLNQNTILEDDQIF 317
Query: 362 LSSQNEVLMKETVPTK---ELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKV 418
L Q L K K YL + SD +V+E RKW V + Y F P+
Sbjct: 318 LHYQERYLEKLGGSRKFNQAFYLPTK-SDLFVSELRKW---VVNYNAYLFPEQ--EFPET 371
Query: 419 PAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNS 478
P + L RY+ H C CS +K T + S
Sbjct: 372 P---------------------------NHDQLIERYYSHTEQCSSCSGALKNIKTIRFS 404
Query: 479 LSVVAAAL 486
++ +
Sbjct: 405 ALIITGIV 412
>gi|113477750|ref|YP_723811.1| pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
gi|110168798|gb|ABG53338.1| Pheophorbide a oxygenase [Trichodesmium erythraeum IMS101]
Length = 465
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/429 (29%), Positives = 197/429 (45%), Gaps = 63/429 (14%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLY-KDGNGELRCYQDRCPHRLAKLSEGQ 135
+DW E WYP+Y +D+ + P T+ +Q +V++ ++ N + R ++D+CPHRLA LS+G+
Sbjct: 24 FDWQEVWYPIYYIEDLEKNKPTTFTLLEQDLVIWWEEKNNQWRVFEDQCPHRLAPLSQGR 83
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQ 192
+ + G LEC YHGW F G G C IPQ A K +S A V++ K QG+++V+ +
Sbjct: 84 INEAGCLECPYHGWAFSGGGNCEIIPQQIAGGKAEKSSRAKVKSLPTKVCQGLLFVYAGK 143
Query: 193 -----KTP-PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 246
+TP P D L N + ++T ++PYD L+EN++D +HIP +H RT
Sbjct: 144 IENAAQTPIPKVDVLDENSN----EWICLNTFRDVPYDGLTLMENVLDASHIPYTHHRT- 198
Query: 247 WTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKT 304
R + P+ EV E GF G W G K F AP ++ + +L +
Sbjct: 199 -VGNRANVAPVELEVLESGKWGFKGVWEEGPRKGTLGRQETTFIAPGMMWH--DLTSKQF 255
Query: 305 GEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMG 360
G + P +G+ L RF SPL K F P+WY H + V E D
Sbjct: 256 GRT---LTVVYATPIRKGECRLFARFPFKFSSPLPKFFIQLSPRWYSHIGQNGVLEDDQI 312
Query: 361 FLSSQNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPK 417
FL Q L + +K YL + +D +V E R W++K + F ++T+S
Sbjct: 313 FLHYQERYLEAKGGSANFSKAFYLPTK-ADLFVFELRSWVNKYNAQL---FPNATLS--- 365
Query: 418 VPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKN 477
+++ L +RY H C C +K K
Sbjct: 366 --------------------------SALNSEILLDRYHSHTKKCSSCRRALKNLQRIKV 399
Query: 478 SLSVVAAAL 486
+ +V + +
Sbjct: 400 GVVLVTSFI 408
>gi|350537085|ref|NP_001234535.1| lethal leaf spot 1-like protein [Solanum lycopersicum]
gi|16973465|gb|AAL32300.1|AF321984_1 lethal leaf spot 1-like protein [Solanum lycopersicum]
Length = 537
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/455 (28%), Positives = 216/455 (47%), Gaps = 73/455 (16%)
Query: 67 ERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-ELRCYQDRCP 125
E + + + W + WYP+ L +D+ P + ++ IV++ D +G + D+CP
Sbjct: 74 ENDEQDSSSKFSWRDHWYPVSLVEDLDPSLPTPFQLLNRDIVIWFDKSGSQWVALDDKCP 133
Query: 126 HRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRS--ACVRTYEV 179
HRLA LSEG+L + G L+C YHGW F G G C +IPQ + +AK +S AC +
Sbjct: 134 HRLAPLSEGRLDENGDLQCSYHGWSFNGCGSCTRIPQAASQGPEAKAFQSPRACATRFPT 193
Query: 180 KESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMD 234
SQG+++VW + P LP E+F +P F V+ +L Y + L+EN+ D
Sbjct: 194 MVSQGLLFVWPDENGWERAQATKPPMLP--EDFDKPEFATVTIQRDLFYGYDTLMENVSD 251
Query: 235 PAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQ 294
P+HI +H + T +R+ A+PL F++ GFA G D+P +F APC
Sbjct: 252 PSHIDFAHHKV--TGRRDRAKPLPFKMEASGPWGFA---GANNDKPKIT-AKFVAPCYSM 305
Query: 295 NNRELVDSK---TGEKHYFTGLFLCR---PTGQGKSMLIVRFGATKRSPLA-------KL 341
N E +D+K G++ + +++C P GK+ IV A S ++
Sbjct: 306 NKIE-IDTKLPIVGDQKWV--IWICSFNVPMAPGKTRSIV-CSARNFSQFTVPGPAWWQV 361
Query: 342 FPKWYFHQNASKVFEQDMGFLSSQNEVLMKE-----TVPTKE---LYLNLRSSDTWVAEY 393
FP+W H ++KV++ DM L Q +V + + T KE L +D +V +
Sbjct: 362 FPRWQEHWTSNKVYDGDMIVLQGQEKVFLSKSKENGTDVNKEYTKLTFTPTQADRFVLAF 421
Query: 394 RKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLAN 453
R W+ + G+ P FG ST + P +P+ V + + +
Sbjct: 422 RNWLRRHGNSQPEWFG-STDNQP-LPSTV-----------------------LSKRQMMD 456
Query: 454 RYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTV 488
R+ +H + C C KA+ T++ ++ ++ V
Sbjct: 457 RFEQHTLKCSSCK---KAYYTFEKLQKLLIGSVVV 488
>gi|357518871|ref|XP_003629724.1| Pheophorbide a oxygenase [Medicago truncatula]
gi|355523746|gb|AET04200.1| Pheophorbide a oxygenase [Medicago truncatula]
Length = 546
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 200/474 (42%), Gaps = 79/474 (16%)
Query: 66 EERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRC 124
+E E +DW +WYPL D+ AP V +V++ D N + + D C
Sbjct: 44 DEPEVETGSEKFDWYSQWYPLMPICDLDKRAPHAKKVMGIDVVIWWDRNESAWQVFDDAC 103
Query: 125 PHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVK 180
PHRLA LSEG++ GRL+C+YHGW F G G C IPQ P + + ACV Y
Sbjct: 104 PHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPEGPPIHTSKKACVAAYPST 163
Query: 181 ESQGVVWVW----------MSQKTPP------NPDKLPWFENFARP-----GFQDVSTIH 219
++W W +++KTPP +P + N P F++++
Sbjct: 164 VQNDILWFWPNTDPQYKDIITRKTPPFIPEIDDPSFTSFMGNRDIPYGYDFNFENITLCI 223
Query: 220 EL--PYDHSILLENLMDPAHIPISH------DRTDWTAKREDAQPLGFEVTERTDRGFAG 271
L Y + +L+ENLMDP+H+P +H + A RE +PL + E GF
Sbjct: 224 PLTVTYMYEVLVENLMDPSHVPYAHYGLMKTPQPKVKADREGGRPLELSIEELDVNGFTE 283
Query: 272 RWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFG 331
G K + +P + + +++ K+ + F +F C P G S LI F
Sbjct: 284 NQGWSKSKFMPPSIFYAYTDLIKPVSSEETKKSSVQKKFALIFFCIPVSPGNSRLIWCFP 343
Query: 332 ATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKET---------VPTKELYLN 382
+ K+ P+W FH + + + D+ L + + ++ VPTK
Sbjct: 344 RNFGLWIDKIVPRWIFHIGQNLIIDSDLYLLHVEEKKILDVGQANWHKACFVPTK----- 398
Query: 383 LRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGA 442
+D V +RKW+ K G +LP P+
Sbjct: 399 ---ADALVIGFRKWLKKYAGDQVEWRGKYNGALPPTPS---------------------- 433
Query: 443 IGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVA-AALTVLAILASG 495
L +RY+ HV++CK C+ K+ S + L +++ A++ ++A + G
Sbjct: 434 -----REQLMDRYWSHVVNCKSCNLAYKSLSVVEVMLQIISVASIGIVATMKQG 482
>gi|428772546|ref|YP_007164334.1| Pheophorbide a oxygenase [Cyanobacterium stanieri PCC 7202]
gi|428686825|gb|AFZ46685.1| Pheophorbide a oxygenase [Cyanobacterium stanieri PCC 7202]
Length = 465
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/438 (27%), Positives = 196/438 (44%), Gaps = 64/438 (14%)
Query: 76 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLY-KDGNGELRCYQDRCPHRLAKLSEG 134
++++ E WYP++ +D+ + P T+ ++ IV++ ++ + R + D+CPHRLA L+EG
Sbjct: 24 NFNYQEVWYPVFFVEDLEKNRPNSFTLLEEDIVIWWEEKTSQWRVFTDKCPHRLAPLTEG 83
Query: 135 QLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMS 191
++ + G LEC YHGW F GEG C IPQ + + S ACVR Y K Q +++V+
Sbjct: 84 RINEEGLLECPYHGWAFSGEGDCEVIPQQQENQRAHTSSRACVRAYPCKVEQDLLFVYAG 143
Query: 192 QKTPPNPDKLPWFENFARPGFQD------VSTIHELPYDHSILLENLMDPAHIPISHDRT 245
P N DK P P +D ++T ++PY LLEN++D +HIP +H +
Sbjct: 144 --NPDNADKTPI--PIVGPLEEDKDKWLVLNTFRDIPYSALTLLENVLDSSHIPYTHHGS 199
Query: 246 DWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSK 303
R + + E+ +GF G W G K + + F AP ++ + +L +
Sbjct: 200 --VGDRTNVSTVELEIISSNRQGFNGVWQEGPRKGKLGSQYTTFVAPNLMWH--DLTSKQ 255
Query: 304 TGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDM 359
G + P +GK L RF S + + F P+WY H N + + E D
Sbjct: 256 FGRT---MTVVYATPISKGKCRLFARFPFQFSSKIPQFFIKLTPRWYSHLNQNAILEDDQ 312
Query: 360 GFLSSQNEVLMK---ETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLP 416
FL Q L K K YL + +D +V E+R+W++K + F H +
Sbjct: 313 IFLHYQERYLEKLGGSEKYEKACYLPTK-ADLYVTEFRQWVNKYNAEL---FPHQNL--- 365
Query: 417 KVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWK 476
PA H L RY H C C +K +
Sbjct: 366 --PATPTHE------------------------TLLERYHSHTEKCSSCRQALKNIQKIR 399
Query: 477 NSLSVVAAAL-TVLAILA 493
L + +A + ++L +A
Sbjct: 400 QILIIFSAIIWSILPAIA 417
>gi|427718650|ref|YP_007066644.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
gi|427351086|gb|AFY33810.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
Length = 464
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 179/361 (49%), Gaps = 24/361 (6%)
Query: 55 DHKVLVGPASAEE-RRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG 113
++ V V S EE R G ++ +D E WYP+Y D+ P T+ + IV++ D
Sbjct: 3 ENVVNVSDRSVEEIRVGGSELDYFDCQEAWYPVYYLDDLEQSQPTPFTLLGRDIVIWWDK 62
Query: 114 NGEL-RCYQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPAD--AKIP 169
+L R + D+CPHRLA LSEG++ DG LEC YHGW F G G C +IPQ + A+
Sbjct: 63 QAKLWRAFDDQCPHRLAPLSEGRINQDGLLECPYHGWAFSGSGSCDRIPQQVVNGIAETS 122
Query: 170 RSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDV--STIHELPYDHSI 227
+ ACV + E QG+++V+ ++P + V +T +LPYD
Sbjct: 123 QRACVASLPTAERQGLLFVYPGNPENATKTQIPIVAPLEESPTEWVCLNTFRDLPYDALT 182
Query: 228 LLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFL 285
LLEN++D +H+P +H R+ R +A P+ EV +GF G W G + +
Sbjct: 183 LLENVLDSSHLPFTHHRS--VGNRANAAPVELEVISSNKQGFTGIWEEGPRRGKLGRQET 240
Query: 286 RFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVR--FGATKRSP--LAKL 341
+F AP ++ + +L + G + P +G+ L R F + P L KL
Sbjct: 241 KFIAPGLMWH--DLTSKQFGRT---LTVVYATPIRKGECRLFARFPFKFPNKLPGLLMKL 295
Query: 342 FPKWYFHQNASKVFEQDMGFLSSQNEVLMKE---TVPTKELYLNLRSSDTWVAEYRKWMD 398
P+WY H + + E D FL Q L + T TK YL + +D++V E R+W++
Sbjct: 296 TPRWYNHIGQNGILEDDQIFLHYQERYLEAKGGSTNFTKAFYLPTK-ADSFVFELRQWVN 354
Query: 399 K 399
+
Sbjct: 355 Q 355
>gi|428775230|ref|YP_007167017.1| Pheophorbide a oxygenase [Halothece sp. PCC 7418]
gi|428689509|gb|AFZ42803.1| Pheophorbide a oxygenase [Halothece sp. PCC 7418]
Length = 440
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 203/462 (43%), Gaps = 65/462 (14%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGNGELRCYQDRCPHRLAKLSE 133
A +++ + WYPL D+ D P+ + Q I ++K G+ R + DRCPHRLA LSE
Sbjct: 3 ATFNFFQHWYPLLPVADLVSDRPISTHLLGQPIAIWKPTGSSHYRAFLDRCPHRLAPLSE 62
Query: 134 GQL--IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVK----ESQGVVW 187
G++ G LEC YHGWQF+ G C KIPQ +A++ C + + + W
Sbjct: 63 GRVDPKTGHLECCYHGWQFDENGTCTKIPQA-ENAELLERNCEQLRATALPTCVANDLFW 121
Query: 188 VW-------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPI 240
VW ++ KTP + P +N GF S + +LPYD L+EN+ DP+H+P
Sbjct: 122 VWPDPDSAELAAKTPLSLS--PKIDN--SKGFLWSSYVRDLPYDWQTLVENIADPSHVPF 177
Query: 241 SHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELV 300
+H RE A P+ E+ E T R + D P+ + FE PC L+ +L
Sbjct: 178 AHHGVQ--GSRESATPIPMEIREATPE----RIVAQIDRNFPSTMTFEPPCRLEYAIQL- 230
Query: 301 DSKTGEKHYFTGLF-LCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASK-VFEQD 358
G + GL C PT GKS ++ +F L P+W+ H V + D
Sbjct: 231 ----GSEEKQIGLITYCIPTAPGKSRIVAQFARNFALRAKDLTPRWWEHIRLRHLVLDGD 286
Query: 359 MGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMD-KVGHGMPYHFGHSTISLPK 417
M L Q E ++E K Y+ ++D +V +RKW + +P+ ST++ P
Sbjct: 287 MVLLHCQ-EAALREEGHWKSAYMMPTNADRFVIAFRKWFENNCDQYIPWQGVGSTVAPP- 344
Query: 418 VPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKN 477
SP + L +RY +H C C +K K
Sbjct: 345 -------------------SPVEARREV-----LLDRYHQHTQICPDCQGALKRIQQLKV 380
Query: 478 SLSVVAAALT-VLAILASGRQWKA---FCLASASLCLAGVYA 515
V A L V+A+L + FC + +L AG++
Sbjct: 381 GTLVTTAILVFVIALLPDASRLSVGLPFC--AIALFSAGIWG 420
>gi|302816087|ref|XP_002989723.1| hypothetical protein SELMODRAFT_130316 [Selaginella moellendorffii]
gi|300142500|gb|EFJ09200.1| hypothetical protein SELMODRAFT_130316 [Selaginella moellendorffii]
Length = 500
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 179/407 (43%), Gaps = 48/407 (11%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSEGQ 135
+DW EWYP+ + +++ P +T+ ++V++ D NG+ + + D+CPHRLA LSEG+
Sbjct: 73 FDWNSEWYPVAIEQELDKGVPHAVTILGNELVVWWDRNGKNWQVFSDKCPHRLAPLSEGR 132
Query: 136 LID-GRLECLYHGWQFE-GEGKCVKIPQL-PADAKI---PRSACVRTYEVKESQGVVWVW 189
+ + G ++C YHGW F G G C +IPQ P D + PR AC Y E QG++W+
Sbjct: 133 IAENGHIQCSYHGWMFAPGTGSCSRIPQAQPGDLSVRLSPR-ACATVYPSMEQQGILWMN 191
Query: 190 MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTA 249
S + + K P+F F ++PY + L+ENLMDP H+P +H +
Sbjct: 192 FS-ASASSQIKPPFFPVLEDADFVHYWATSDVPYGYEALIENLMDPTHVPFAHHKLQ--G 248
Query: 250 KREDAQPLGFEVTERTDRGFAGRWGKEK---DEPLPNFLRFEAPCVLQNNRELVDSKTGE 306
R P+ + V + GF G G+ PL + P Q + SK E
Sbjct: 249 NRNKTGPVSYTVNKFDRHGFKGSTGRGDVVFMPPLSFVMEIRIPPK-QKVLSKLSSKLEE 307
Query: 307 KHYFT-GLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
T +F+C P G+S F + P+W H V + D+ L
Sbjct: 308 SDKITYTVFMCVPVLPGRSKAFWSFPRNFAKSIHFYTPRWLAHLRHMLVLDSDLYLLH-- 365
Query: 366 NEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHA 425
+M++ E S+D +V +R+W+ G P + H LP
Sbjct: 366 ---IMEQKQERNEREFTPTSADAFVLGFRRWLSVYAGGAPGYAPHIDRKLP--------- 413
Query: 426 PAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAF 472
SSP K P L +RY HV C C + +++F
Sbjct: 414 ----------SSPPK--------PQLMDRYENHVKRCPTCMAALRSF 442
>gi|427730536|ref|YP_007076773.1| Rieske (2Fe-2S) domain-containing protein [Nostoc sp. PCC 7524]
gi|427366455|gb|AFY49176.1| Rieske (2Fe-2S) domain-containing protein [Nostoc sp. PCC 7524]
Length = 443
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/417 (28%), Positives = 188/417 (45%), Gaps = 64/417 (15%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSE 133
A++++ + WYP+ +D+ P +TV ++V++K + E R + D+CPHRLA LSE
Sbjct: 3 AEFNFFQNWYPVSPIEDLDPQKPTPVTVLGLRLVIWKPKSSETYRVFLDQCPHRLAPLSE 62
Query: 134 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWV 188
G++ + G L C YHGWQF+ +G C +IPQ + ++ CV T V+++ ++WV
Sbjct: 63 GRIDEQTGNLMCSYHGWQFDAQGTCTQIPQAENPELVTKNQNNFCVTTLPVRQANDLLWV 122
Query: 189 WMSQKTP--PNPDKLPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
W+ ++P LP A GF S + +L YD L+EN+ DP+H+P +H
Sbjct: 123 WLDAQSPELAAAQALPLSPQVDANKGFVWSSFVRDLEYDWQTLVENVADPSHVPFAHHGV 182
Query: 246 DWTAKREDAQPLGFEVTERTDR--------GFAGRWGKEKDEPLPNFLRFEAPCVLQNNR 297
RE A+P+ + + T GF + + FE PC L+
Sbjct: 183 Q--GNREKARPIPISIVQSTANLIEAVTTGGFQTK------------ITFEPPCRLEYAI 228
Query: 298 ELVDSKTGEKHYFTGLF-LCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH-QNASKVF 355
D+ G++ GL C P GKS ++ +F L + P+W+ H N + V
Sbjct: 229 SFGDA--GKQ---VGLITYCIPVAPGKSRIVAQFTRNFAKTLHRFIPRWWDHITNRNAVL 283
Query: 356 EQDMGFLSSQNEVLMKE--TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTI 413
+ DM L Q L ++ T K Y S+D V E+RKW D G
Sbjct: 284 DGDMILLQQQEYFLQQKQLTESWKTAYQLPTSADRLVIEFRKWFDVYCRG---------- 333
Query: 414 SLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIK 470
LP + HA + + + +RY +H HC C + +K
Sbjct: 334 QLPWSEVGISHAEYSTINSDRSV--------------ILDRYKQHTQHCSSCRNALK 376
>gi|318040272|ref|ZP_07972228.1| Rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
CB0101]
Length = 437
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 180/404 (44%), Gaps = 53/404 (13%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL-YKDGNGELRCYQDRCPHRLAKLSEGQLI 137
WT WY + +D+ P T+ + +VL ++ +G+ R D CPHRL LS+G+L
Sbjct: 11 WTHAWYAVAFLRDLDPKRPTPFTLMGEDLVLWFERSSGQWRALADVCPHRLVPLSDGRLN 70
Query: 138 D-GRLECLYHGWQFEGEGKCVKIPQLPADAKI-PRSACVRTYEVKESQGVVWVWMSQKTP 195
+ G LEC YHGW F GEG+C IPQ + I PRS C R Y QG+++V+
Sbjct: 71 EAGELECPYHGWTFNGEGRCTAIPQAQEGSTISPRSHC-RGYATATGQGLLFVFSGDIAE 129
Query: 196 PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ 255
LP +PG+ T +LP D LLEN++D +H+P +H T +RE+A
Sbjct: 130 AADHPLPLVPEIDQPGWLVQDTFRDLPMDALTLLENVLDVSHVPFTHHAT--VGRRENAG 187
Query: 256 PLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGL 313
P+ E+ GF G W G + + F + APC++ + EL + G FT +
Sbjct: 188 PVELELNSFGPEGFTGVWQEGPRRGKLGSEFTTYAAPCLMWH--EL--TAKGFARIFTVV 243
Query: 314 FLCRPTGQGKSMLIVRFGATKRSP----LAKLFPKWYFHQNASKVFEQDMGFLSSQNEVL 369
+ P +G+ LI RF SP L +L P+W H V E D FL Q VL
Sbjct: 244 Y-ATPIRRGECRLITRFPFKFNSPWPARLLRLRPEWLQHLGNHVVLEDDQLFLHWQERVL 302
Query: 370 MKE---TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAP 426
+ + +L+ S+D +V W+++ G G P+ P P HA
Sbjct: 303 EQRGGSQDAMRSFHLST-SADRYVQALHDWVNRYG-GEPF------PGEPLPPRQGRHA- 353
Query: 427 AGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIK 470
L RY H HC+ CS +
Sbjct: 354 ------------------------LMERYEAHTRHCRSCSGADR 373
>gi|41469411|gb|AAS07234.1| putative iron-sulfur cluster-binding protein [Oryza sativa Japonica
Group]
Length = 521
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 144/530 (27%), Positives = 212/530 (40%), Gaps = 96/530 (18%)
Query: 1 MALSLRSLFFSPLLKIPSPKLTPPTTNVIISLNKTPKSR---KCHAVTDRSSTSTVGDHK 57
++L+ SL F + PS PP IS + R AV + D K
Sbjct: 9 LSLTRLSLPFRDTVTNPSTPRIPPWRRQWISPTDARRRRLSMPVSAVAAEAPLPRAVDEK 68
Query: 58 VLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-E 116
PA+ EER +DW ++WYP+ +D+ P G V +V++ DG G E
Sbjct: 69 ET--PAAGEER--------FDWLDQWYPVAPVRDLDKRKPHGKMVMGISVVVWFDGGGGE 118
Query: 117 LRCYQDRCPHRLAKLSEGQLIDGR--LECLYHGWQFEGEGKCVKIPQLPA---DAKIPRS 171
R D CPHRLA LSEG+ +DG+ L+C YHGW F+G G C IPQ PA
Sbjct: 119 WRVVDDACPHRLAPLSEGR-VDGKGCLQCAYHGWCFDGHGSCQFIPQAPALGPPVHKNSK 177
Query: 172 ACVRTYEVKESQGVVWVW----------MSQKTPPNPDKLPWFENFARPGFQDVSTIHEL 221
ACV +Y ++W + + +K P P+ P S + +L
Sbjct: 178 ACVASYPSVVQNNILWFYPRSEPEYKEILQRKRP------PYIRELDDPSSVINSGVRDL 231
Query: 222 PYDHSILLENLMDPAHIPISHD-------RTDWTAKREDAQPLGFEVTERTDRGFAG--- 271
Y + +L+EN MDPAH+P +H R + + E P+ + E GF
Sbjct: 232 LYGYELLVENFMDPAHVPYAHRGQFPHVPREEDIGRYEGGLPIKMNIEELNIAGFHSNPE 291
Query: 272 -RWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRF 330
WG + +F AP V Q+N + K E T +F C P G+ +I
Sbjct: 292 ENWG---------YFKFIAP-VDQDNNNTNNKKQPE---VTTVFFCIPVSPGRCRVIWAN 338
Query: 331 GATKRSPLAKLFPKWYFHQNASKVFEQDMGFL--SSQNEVLMKETVPTKELYLNLRSSDT 388
G K+ P+W+ H ++V + D L +N K Y+ SSD
Sbjct: 339 GYNLDGWFDKMIPRWWLHIKTNQVLDSDSSVLHIEERNYAAFGLDNWHKACYVPT-SSDN 397
Query: 389 WVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHA 448
+ +R W K + LP VE
Sbjct: 398 LIIAFRNWFKKYCNNQVGWLTPMVNQLPPASTRVE------------------------- 432
Query: 449 PNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVV--AAALTVLAILASGR 496
+ RY+ HV+ C CS+ +K W +L V A++ V+ LA+G+
Sbjct: 433 --VYERYWSHVMQCTSCSAALK----WMRALEVALQVASVAVVGFLAAGK 476
>gi|116070900|ref|ZP_01468169.1| cell death suppressor protein Lls1-like [Synechococcus sp. BL107]
gi|116066305|gb|EAU72062.1| cell death suppressor protein Lls1-like [Synechococcus sp. BL107]
Length = 438
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 194/449 (43%), Gaps = 60/449 (13%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE---LRCYQDRCPHRLAKLSEGQ 135
WTE+W+P+ +D+ P T+ ++ +V++ D E R + D CPHRL LSEG+
Sbjct: 5 WTEQWWPIAYLQDLDRSQPNRFTLLERDLVIWWDAKAEQASWRVFPDVCPHRLVPLSEGR 64
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAK--IPRSACVRTYEVKESQGVVWVWMSQ 192
+ D G LEC YHGW F+GEG C IPQ P + K RS C + QG+++VW +
Sbjct: 65 INDEGLLECPYHGWSFDGEGHCRSIPQAPDNTKPEARRSRC-SSLPTAIGQGLLFVWTGE 123
Query: 193 KTPPNPDKLPWF----ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWT 248
N LP E+ QD T +LP D LLEN++D +H+P +H +T
Sbjct: 124 PDAANQHPLPLVPALEEDPKSWTLQD--TFRDLPMDAVTLLENVLDVSHVPFTHHKT--V 179
Query: 249 AKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE 306
R +A P+ +T + GF W G + + F AP ++ ++ + G
Sbjct: 180 GNRNNASPVLATITREAEDGFDAFWEEGPRRGKLGSQTTSFHAPQLMWHDL----TAKGF 235
Query: 307 KHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGFL 362
T ++ P +G+ L RF +S + KL P+W H KV E D FL
Sbjct: 236 ARILTVVYAV-PIRRGECRLFARFPFQFQSAVPKLLIGLRPRWLQHIGNHKVLEDDQVFL 294
Query: 363 SSQNEVLMKE--TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPA 420
Q VL + + + ++D +VA +W++ G G P+ + LP+
Sbjct: 295 HWQERVLERAGGSPAADRAFFMPNTADVYVAALHRWLNNNG-GEPF----AGKDLPE--- 346
Query: 421 VVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLS 480
+L +RY+ H C+ CS+ ++ +
Sbjct: 347 ------------------------RQRTADLMDRYYSHTQSCRSCSTALRRIRAARPWAW 382
Query: 481 VVAAALTVLAILASGRQWKAFCLASASLC 509
VV L L G W A + A+L
Sbjct: 383 VVLWGAAALVGLGQGGVWSAIGVVIAALA 411
>gi|260434502|ref|ZP_05788472.1| rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 8109]
gi|260412376|gb|EEX05672.1| rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 8109]
Length = 465
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 129/453 (28%), Positives = 202/453 (44%), Gaps = 72/453 (15%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQDRCPHRLAKLSEGQLI 137
WTE+W+P+ +D+ + P T+ ++ +V++ D R + D CPHRL LSEG++
Sbjct: 36 WTEQWWPISYVQDLDPNQPSRFTLLERDLVIWWDRAASSWRVFPDVCPHRLVPLSEGRIN 95
Query: 138 D-GRLECLYHGWQFEGEGKCVKIPQLPADAKIP---RSACVRTYEVKESQGVVWVWMSQK 193
+ G LEC YHGW F+G G+C ++PQ D P RS C + QG+++VWM
Sbjct: 96 EEGLLECPYHGWSFDGGGQCQRVPQA-LDNTQPNNRRSRCA-SLPTATGQGLLFVWMGAP 153
Query: 194 TPPNPDKLPWFENFARPGFQD-------VSTIHELPYDHSILLENLMDPAHIPISHDRTD 246
+P +LP P +D T +LP D LLEN++D +H+P +H RT
Sbjct: 154 DAADPSQLPLV-----PALEDNPDSWTVQDTFRDLPMDAVTLLENVLDVSHVPFTHHRT- 207
Query: 247 WTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKT 304
KR++A P+ +T GF W G + + F AP ++ ++ +
Sbjct: 208 -VGKRKNAAPVEASITGEDASGFTAYWEEGPRRGKLGAQSTTFNAPQLMWHDL----TAK 262
Query: 305 GEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMG 360
G T ++ P +G+ L RF +S + +L P+W H KV E D
Sbjct: 263 GFGRILTVVYAV-PIRRGECRLFARFPFQFQSAVPRLLIGLRPRWLQHIGNHKVLEDDQV 321
Query: 361 FLSSQNEVLMKE--TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKV 418
FL Q VL + + + + ++D +VA +W++ G G P+ P
Sbjct: 322 FLHWQERVLERAGGSSAVERSFFMPTTADVYVAALHRWLNANG-GEPF------AGQPLP 374
Query: 419 PAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSV---IKAFSTW 475
P A L +R+ H IHC+ CSSV I+A W
Sbjct: 375 PRQTTTA-------------------------LMDRHNSHTIHCRSCSSVLRRIRAARPW 409
Query: 476 KNSLSVVAAALTVLAILASGRQWKAFCLASASL 508
+L +A VL + G W + L +A+L
Sbjct: 410 AWALIWGSA---VLIGIQQGSGWSSTGLVTAAL 439
>gi|298491713|ref|YP_003721890.1| pheophorbide a oxygenase ['Nostoc azollae' 0708]
gi|298233631|gb|ADI64767.1| Pheophorbide a oxygenase ['Nostoc azollae' 0708]
Length = 442
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 135/461 (29%), Positives = 205/461 (44%), Gaps = 61/461 (13%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSE 133
A++++ WYPL +D+ P+ +T+ ++V++K + + R + D+CPHRLA LSE
Sbjct: 3 AEFNFFHHWYPLSPVEDLDSPRPVPVTLLGIRLVIWKPRDADNYRVFLDQCPHRLAPLSE 62
Query: 134 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPRSACVRTYEVKESQGVVWV 188
G++ D G L C YHGWQF+G G C IPQ AK ++ CV + V++ ++WV
Sbjct: 63 GRVDDKTGNLMCSYHGWQFDGRGICTHIPQAENPQLVAKNQQNFCVLSLPVRQENDLLWV 122
Query: 189 WMSQK------TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
W K T P P P + GF S I +L YD L+EN+ DP+H+P SH
Sbjct: 123 WPDAKSAELAATTPLPLS-PHID--TNKGFVWSSYIRDLEYDWQTLVENVADPSHVPFSH 179
Query: 243 DRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL--V 300
R+ A + V + T K LP + F+ PC+L+ +
Sbjct: 180 HGVQ--GNRDKATSIPLNVVQSTINLIEVSISKA----LPTTITFQPPCLLEYAISIGDT 233
Query: 301 DSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASK-VFEQDM 359
D K G Y C P GKS ++ +F L L P+W+ H V + DM
Sbjct: 234 DKKLGLIVY------CVPVSPGKSRIVAQFTRNFAKNLHYLIPRWWEHIKIRNLVLDGDM 287
Query: 360 GFLSSQNEVLM--KETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG-MPYHFGHSTISLP 416
L Q +L +E+ K Y S+D V E+R W DK HG +P+
Sbjct: 288 MLLHQQEYLLQQRQESESWKTAYKLPTSADRLVIEFRTWFDKYCHGQLPW---------- 337
Query: 417 KVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWK 476
+ V S+P + I A L +RY +H HC C +K +
Sbjct: 338 --------------SKVGISNP-ETKINNNRAVML-DRYHQHTQHCSSCRKALKNLQRLQ 381
Query: 477 N-SLSVVAAALTVLAILASG-RQWKAFCLASASLCLAGVYA 515
L+ V ++ +A+L+ R + +L GVY+
Sbjct: 382 ILLLTYVVTSVCGVAVLSDALRMQLGLPVVITALLGLGVYS 422
>gi|148239148|ref|YP_001224535.1| Rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 7803]
gi|147847687|emb|CAK23238.1| Rieske-type iron-sulfur cluster-binding protein [Synechococcus sp.
WH 7803]
Length = 440
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 186/409 (45%), Gaps = 58/409 (14%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLAKLSEGQL- 136
WTE+W+P+ +D+ P TV ++ +VL+ D + G R + D CPHRL LSEG++
Sbjct: 5 WTEQWWPVAYLRDLDPKRPQRFTVLERDLVLWWDASIGSWRAFDDVCPHRLVPLSEGRIN 64
Query: 137 IDGRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
G LEC YHGW F+GEG+C +IPQ+ A+A RS+C + QG+++VW T
Sbjct: 65 ASGELECPYHGWSFDGEGRCTRIPQMAEGANASGRRSSC-NSLPTCSGQGLLFVWTGDPT 123
Query: 195 ---PPNPDKLPWFENFAR---PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWT 248
+P +P + G+ T +LP D LLEN++D +H+P +H +T
Sbjct: 124 MAGAKDPPLVPLLQEQGDGWADGWIVQDTFRDLPMDALTLLENVLDVSHVPFTHHKT--V 181
Query: 249 AKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE 306
RE+A P+ + D GF W G + F F AP ++ ++ +D+K G
Sbjct: 182 GNRENAAPVLAVIRAENDSGFEAFWEEGPRRGRLGSQFTHFSAPQLMWHD---LDAK-GF 237
Query: 307 KHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGFL 362
T ++ P +G+ L RF +S L +L P+W H KV E D FL
Sbjct: 238 ARILTVVYAV-PIRRGECRLFARFPFQFKSALPRLLVGLRPRWLQHIGNHKVLEDDQVFL 296
Query: 363 SSQNEVLMKE--TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPA 420
Q VL + + + +D +VA +W++ G G P+
Sbjct: 297 HWQERVLESAGGSAAAERAFFLPTEADVYVAALHRWINSHG-GEPF-------------- 341
Query: 421 VVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVI 469
P + I + L +RY H ++C+ CS +
Sbjct: 342 ------------AGQRLPPRQGIAS-----LMDRYNSHTVNCRSCSQAL 373
>gi|407930081|gb|AFU51539.1| lethal leaf spot 1-like protein [Capsicum annuum]
Length = 537
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 203/431 (47%), Gaps = 70/431 (16%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-ELRCYQDRCPHRLAKLSE 133
+ + W + WYP+ L +D+ P + ++ +V++ D +G + D+CPHRLA LSE
Sbjct: 82 SKFSWRDNWYPVSLVEDLDPSLPTPFQLLNRDMVIWFDKSGSQWVVLDDKCPHRLAPLSE 141
Query: 134 GQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACVRTYEVKESQGVV 186
G+L + G L+C YHGW F G G C +IPQ ++ + PR+ R + SQG++
Sbjct: 142 GRLDENGHLQCSYHGWSFNGCGSCTRIPQAASEGPEAKAFQSPRATATR-FPTMVSQGLL 200
Query: 187 WVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPIS 241
+VW + P LP E+F +P F V+ +L Y + L+EN+ DP+HI +
Sbjct: 201 FVWPDENGWERAQATKPPMLP--EDFDKPEFATVTIQRDLFYGYDTLMENVSDPSHIDFA 258
Query: 242 HDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVD 301
H + T +R+ A+PL F++ GFA G D+P + +F APC N E +D
Sbjct: 259 HHKV--TGRRDRAKPLPFKMEASGPWGFA---GANNDKPKIS-AKFVAPCYSMNKIE-ID 311
Query: 302 SK---TGEKHYFTGLFLCR---PTGQGKSMLIVRFG------ATKRSPLAKLFPKWYFHQ 349
+K G++ + +++C P GK+ IV A ++FP+W H
Sbjct: 312 TKLPIVGDQKWV--IWICSFNVPMAPGKTRSIVCSARNFFQFAVPGPAWWQVFPRWQEHW 369
Query: 350 NASKVFEQDMGFLSSQNEVLMKETVPT--------KELYLNLRSSDTWVAEYRKWMDKVG 401
++KV++ DM L Q ++ + ++ +L +D +V +R W+ + G
Sbjct: 370 TSNKVYDGDMIVLQGQEKIFLSKSKENGTDVNKDYTKLTFTPTQADRFVLAFRNWLRRHG 429
Query: 402 HGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIH 461
+ P FG ST + P +P+ V + + +R+ +H +
Sbjct: 430 NSQPEWFG-STDNQP-LPSTV-----------------------LSKRQMMDRFEQHTLK 464
Query: 462 CKGCSSVIKAF 472
C C + F
Sbjct: 465 CSSCRNAYYTF 475
>gi|67925326|ref|ZP_00518682.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
gi|67852825|gb|EAM48228.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
Length = 468
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 207/474 (43%), Gaps = 63/474 (13%)
Query: 52 TVGDHKVLVGPASAEERRGERQVADY-DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLY 110
T+ ++K + P G DY DW E WYP++ +D+ P T+ ++ IV++
Sbjct: 3 TINNNKTTITPEKTSIIGGSD--PDYFDWQEVWYPVHYVEDLDKTRPTAFTLLEKNIVIW 60
Query: 111 -KDGNGELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKI 168
++ N + ++D+CPHRLA LSEG++ + G LEC YHGW F G+G C IPQ K
Sbjct: 61 WEEKNNQWSVFEDQCPHRLAPLSEGRINESGCLECPYHGWAFSGQGNCEIIPQQHPTGKA 120
Query: 169 PRS--ACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDV--STIHELPYD 224
+S A V+T + QG+++V+ + +P + + V +T +LPYD
Sbjct: 121 EKSLRASVKTLPTQVRQGLLFVYAGKPENAEITPIPLVDVLEEDSDEWVCLNTFRDLPYD 180
Query: 225 HSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLP 282
L+EN++D +HIP +H ++ R + P+ EV E GF G W G K
Sbjct: 181 ALTLMENVLDSSHIPYTHHKS--VGNRANVSPVELEVIESGKWGFKGVWEEGPRKGTLGR 238
Query: 283 NFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF 342
F AP ++ + +L + G + P G+GK L RF S + K F
Sbjct: 239 QETNFVAPAMMYH--DLTSKQFGRT---LTVVYATPIGKGKCRLFARFPFKFSSKIPKFF 293
Query: 343 ----PKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT---KELYLNLRSSDTWVAEYRK 395
P+WY H + V E D FL Q L ++ + K YL + +D +V +
Sbjct: 294 IKLTPRWYSHIGQNGVLEDDQIFLHHQERYLEQKGGSSKFAKAFYLPTK-ADLFVFQLHI 352
Query: 396 WMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRY 455
W+ + + P+ + SPA + + L +RY
Sbjct: 353 WISQYQAQL----------FPE----------------QSLSPA------LSSETLLDRY 380
Query: 456 FRHVIHCKGCSSVIKAFSTWKNSLSVV-----AAALTVLAILASGRQWKAFCLA 504
H HC C + +K K +++ +A +++L I W L
Sbjct: 381 HSHTKHCSSCRTALKNLQRLKIGVAIATSIIWSAIVSLLLIFDHPPIWSMILLT 434
>gi|30102998|gb|AAP21411.1| putative cell death suppressor protein [Oryza sativa Japonica
Group]
gi|108711642|gb|ABF99437.1| Rieske domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 555
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 206/488 (42%), Gaps = 77/488 (15%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG--ELRCYQDRCPHR 127
G + ++W ++WYP+ D+ P G V ++V + DG G E R D CPHR
Sbjct: 78 GGGEEGRFEWLDQWYPVAPVCDLDPRKPHGKMVMGLRVVAWFDGGGGGEWRVVDDACPHR 137
Query: 128 LAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSACVRTYEVKESQ 183
LA LSEG++ GRL+C YHGW F+G G C IPQ PA ACV +Y
Sbjct: 138 LAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIPQAPALGPPVHKNSKACVASYPSVVQN 197
Query: 184 GVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHI 238
++W + + P + L P+F + P F V + +L Y + +L+ENLMDPAH+
Sbjct: 198 NILWFY-PRSEPEYKEILQRKRPPYFPDLDDPSFNTVFGVRDLFYGYDVLVENLMDPAHV 256
Query: 239 PISHDRTDWTAKREDA----------------QPLGFEVTERTDRG-FAGRWGKEKDEPL 281
P +H +ED Q G+ V RT++ G ++D+
Sbjct: 257 PYAHKGLMPIQNKEDPGRYCSTVHLLSTVESDQEGGYPVKIRTEQAKIDGFLSVQEDDVC 316
Query: 282 PNFLRFEAPCVL----------QNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFG 331
+++F+APC L Q ++ K + T +FLC P G+S LI F
Sbjct: 317 --YMKFDAPCTLYGKPFRTKEPQIDQGKEKKKKKQPEAMT-VFLCVPVAPGRSRLIWAFP 373
Query: 332 ATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT--KELYLNLRSSDTW 389
+ L + P+W +H + V + D L + + K Y+ SSD
Sbjct: 374 RNVDAWLDNIIPRWLYHIVTNIVLDSDSYLLHIEERNFATVGLDNWHKACYVPT-SSDNM 432
Query: 390 VAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAP 449
V +R W K + G +T ++P +P K +
Sbjct: 433 VITFRNWFRKYCK---HQIGWATPMANQLP----------------PTPTKDQV------ 467
Query: 450 NLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQW-----KAFCLA 504
RY HV+ C CS+ +K + +L V + A+ +A G +A ++
Sbjct: 468 --LERYRSHVMQCTSCSAALKKMKALEVALQVASVAIVGFLAVAKGSLAPSVVRRAAAVS 525
Query: 505 SASLCLAG 512
+A LC A
Sbjct: 526 TAVLCFAA 533
>gi|33865393|ref|NP_896952.1| cell death suppressor protein Lls1-like protein [Synechococcus sp.
WH 8102]
gi|33632562|emb|CAE07374.1| cell death suppressor protein Lls1 homolog [Synechococcus sp. WH
8102]
Length = 455
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/407 (29%), Positives = 188/407 (46%), Gaps = 58/407 (14%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSEGQLI 137
WTE+W+P+ +D+ P T+ ++ +V++ D +GE R + D CPHRL LSEG++
Sbjct: 13 WTEQWWPISYLQDLDPQRPNRFTLLERDLVIWWDQSGESWRVFPDVCPHRLVPLSEGRIN 72
Query: 138 D-GRLECLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKT 194
D G+LEC YHGW F+G+G+C +IPQ + + RS C + +QG+++VWM
Sbjct: 73 DAGQLECPYHGWSFDGDGQCRQIPQALENTQPDSRRSRCA-SLPTASAQGLLFVWMGSPD 131
Query: 195 PPNPDKLPWF----ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAK 250
+P++LP EN QD T +LP D LLEN++D +H+P +H +T K
Sbjct: 132 SADPEQLPLVPALEENPDSWTVQD--TFRDLPMDAVTLLENVLDVSHVPFTHHKT--VGK 187
Query: 251 REDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH 308
RE+A P+ +T GF W G + + F AP ++ ++ + G
Sbjct: 188 RENAAPVEATITAEDASGFKAYWEEGPRRGKLGAQSTTFLAPQLMWHDL----TAKGFGR 243
Query: 309 YFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGFLSS 364
T ++ P +G+ L RF +S L +L P+W H KV E D FL
Sbjct: 244 ILTVVYAV-PIRRGECRLFARFPFQFQSALPRLLIGLRPRWLQHIGNHKVLEDDQVFLHW 302
Query: 365 QNEVL--MKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVV 422
Q L + + + ++D +VA +W++ G G P+
Sbjct: 303 QERTLEAAGGSAAAERAFFLPTAADVYVAALHRWLNHNG-GEPF---------------- 345
Query: 423 EHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVI 469
A P T L +RY H IHC+ CS+ +
Sbjct: 346 ------------AGQPLPNRQPTT---ALMDRYVSHTIHCRSCSTAL 377
>gi|427707380|ref|YP_007049757.1| Pheophorbide a oxygenase [Nostoc sp. PCC 7107]
gi|427359885|gb|AFY42607.1| Pheophorbide a oxygenase [Nostoc sp. PCC 7107]
Length = 465
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 188/432 (43%), Gaps = 57/432 (13%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRLAKLSEGQ 135
+DW E WYP++ D+ T+ ++ +VL+ D N + R ++D+CPHRLA LSEG+
Sbjct: 27 FDWLEVWYPVHYVADLNKSQLTRFTLLERDLVLWWDKNEQTWRAFEDQCPHRLAPLSEGR 86
Query: 136 L-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQ 192
+ DG LEC YHGW F G GKC IPQ K S ACV + QG+++V+ +
Sbjct: 87 VNKDGWLECPYHGWAFSGTGKCESIPQQAPGGKAETSPRACVNSLPTTVRQGLLFVYPGK 146
Query: 193 KTPPNPDKLPWFENFAR--PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAK 250
+P + G+ ++T +LPYD L+EN++D +HIP +H RT
Sbjct: 147 AENAAKTLVPIVDVLEENTEGWVCLNTFRDLPYDALTLMENVLDSSHIPYTHHRT--VGN 204
Query: 251 REDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH 308
R + P+ E+ E GF G W G K F AP ++ + +L + G
Sbjct: 205 RANVAPVELEIVELGKWGFKGLWQEGPRKGTLGKQDTTFIAPGLMWH--DLTSKQFGRT- 261
Query: 309 YFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGFLSS 364
+ P +G+ L RF S L LF P+WY H + V E D FL
Sbjct: 262 --LTVVYATPIRKGECRLFARFPFKFSSNLPGLFLKLTPRWYSHLGQNGVLEDDQIFLHH 319
Query: 365 QNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAV 421
Q L ++ TK YL + +D +V + R W+ +
Sbjct: 320 QERYLEQKGGTDNFTKAFYLPTK-ADIFVFQLRSWVKQY--------------------- 357
Query: 422 VEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSV 481
+ S P + + L +RY H HC C + +K + L V
Sbjct: 358 -----------CAESFPGETLPPPLPKEALLDRYHSHTKHCSSCRTALKNLQ--RLRLGV 404
Query: 482 VAAALTVLAILA 493
V A + ++L+
Sbjct: 405 VVATALIWSLLS 416
>gi|427734356|ref|YP_007053900.1| Rieske (2Fe-2S) domain-containing protein [Rivularia sp. PCC 7116]
gi|427369397|gb|AFY53353.1| Rieske (2Fe-2S) domain-containing protein [Rivularia sp. PCC 7116]
Length = 445
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 198/436 (45%), Gaps = 56/436 (12%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
+++++ WYP+ +D+ P +TV ++V++K + R + D+CPHRLA LSEG
Sbjct: 3 SEFNFFGHWYPVSPVEDIDPKKPTAVTVLGLRLVIWKPKLSDYRVFLDKCPHRLAPLSEG 62
Query: 135 QLID--GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPRSACVRTYEVKESQGVVWVW 189
++ + G L C YHGW+F+ EG C +IPQ K ++ C + V++ ++WVW
Sbjct: 63 RVDEKTGNLMCSYHGWEFDAEGICTRIPQAENPQLVTKNQKNLCAVSLPVRQENDLLWVW 122
Query: 190 MSQKTP--PNPDKLPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 246
+ +P N LP A GF S + +L YD L+EN+ DP+H+P +H
Sbjct: 123 LDANSPQLANDTPLPLSPQVDANKGFVWSSYVRDLEYDWQTLVENVADPSHVPFTHHGVQ 182
Query: 247 WTAKREDAQPLGFEVTERT----DRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDS 302
RE A P+ ++ + T + +GR+ + FE PC L+
Sbjct: 183 --GNREQASPVILQIVKSTANLIEATSSGRFQTT--------ITFEPPCRLE-----YTI 227
Query: 303 KTGEKHYFTGLF-LCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH-QNASKVFEQDMG 360
+ G++ GL C PT GKS ++ +F + L ++ P+W+ H + +KV + DM
Sbjct: 228 RVGDEGKQLGLVTYCIPTYPGKSRIVAQFTRNFATNLNRIIPRWWSHIKIRNKVLDGDMI 287
Query: 361 FLSSQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKWMDKVGHG-MPYHFGHSTISLPK 417
L Q L + K Y S+D + E+R W DK G +P+
Sbjct: 288 LLHQQEHFLQERQSQESWKTAYQLPTSADRLIIEFRNWFDKYSQGKLPWD---------- 337
Query: 418 VPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKN 477
V P ++ + L +RY +H +C C +K +
Sbjct: 338 --EVGIQVPQNCTLTINENR-----------QQLLDRYKQHTQNCSSCRKALKNSQRLQV 384
Query: 478 SL-SVVAAALTVLAIL 492
L + A ++V+AIL
Sbjct: 385 FLVAYFAILISVIAIL 400
>gi|113953594|ref|YP_731035.1| cell death suppressor protein Lls1-like protein [Synechococcus sp.
CC9311]
gi|113880945|gb|ABI45903.1| cell death suppressor protein Lls1 homolog [Synechococcus sp.
CC9311]
Length = 440
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 198/446 (44%), Gaps = 71/446 (15%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSEGQLI 137
W+E+W+P+ +D+ P T+ +Q +VL+ D G+ R ++D CPHRL LSEG++
Sbjct: 5 WSEQWWPVAYLRDLDRTRPQRFTLLEQDLVLWWDAPGQCWRAFEDVCPHRLVPLSEGRIN 64
Query: 138 D-GRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
+ G+LEC YHGW F+G+G C IPQ+ A ++ R+ C ++ QG+++VW +
Sbjct: 65 EAGQLECPYHGWSFDGQGTCRAIPQMGERARSESKRTGC-GSFPTATGQGLLFVWSGTAS 123
Query: 195 PPNPDKLPWFENFARPG--------FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 246
+ LP G QD T +LP D LLEN++D +H+P +H RT
Sbjct: 124 AADSAALPLVPVLQEQGDGWADGWIVQD--TFRDLPMDALTLLENVLDVSHVPFTHHRT- 180
Query: 247 WTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKT 304
KRE+A P+ +T +GF W G + + F AP ++ ++ +
Sbjct: 181 -VGKRENASPVEAVITREDSQGFEAFWQEGPRRGKLGSQDTHFRAPQLMWHDL----TAK 235
Query: 305 GEKHYFTGLFLCRPTGQGKSMLIVR----FGATKRSPLAKLFPKWYFHQNASKVFEQDMG 360
G T ++ P +GK L R F A L L P+W H KV E D
Sbjct: 236 GFARILTVVYAV-PISRGKCRLFARFPFQFKAAAPRLLVGLRPRWLQHIGNHKVLEDDQV 294
Query: 361 FLSSQNEVL--MKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKV 418
FL Q VL + ++ ++ S+D +V +W+++ G G P+ + LP
Sbjct: 295 FLHWQERVLETAGGSAAAEQAFVLPTSADIYVKALHRWVNRQGGG-PF----AGRPLPPR 349
Query: 419 PAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAF------ 472
V L +RY H HC+ CS ++
Sbjct: 350 QEV---------------------------EALMDRYHSHTKHCRSCSVALRRIRSLRPW 382
Query: 473 ---STWKNSLSVVAAALTVLAILASG 495
S W +++ + A L+ L L G
Sbjct: 383 LWGSLWLSAVLIGAGQLSWLLWLGVG 408
>gi|434388871|ref|YP_007099482.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428019861|gb|AFY95955.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 480
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 216/488 (44%), Gaps = 81/488 (16%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
AD+ W +WYP+ + + + P + + +VL++DG + +C++D CPHRLA LSEG
Sbjct: 19 ADFQWMPQWYPVAVVEFLDPSKPHAFQLLGKNVVLWRDGAQQWQCFEDACPHRLAPLSEG 78
Query: 135 QL-IDGRLECLYHGWQFEGEGKCVKIPQ-----LPADAKIPRSACVRTYEVKESQGVVWV 188
++ DG L C YHGW+F G+G C KIPQ L A + +C +Y +++QG++WV
Sbjct: 79 RVEADGTLLCAYHGWRFGGDGNCTKIPQSQSPELEAQHRANPKSCAISYPTQQAQGLLWV 138
Query: 189 WMS-------QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPIS 241
W + +P + E + + I +LPY +EN+ DPAH+P+S
Sbjct: 139 WAESGAKGAVESKNRSPRIISELEGKSDRVVKLFWNIRDLPYGWDYFMENVADPAHVPVS 198
Query: 242 H-----DRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLR-FEAPCVLQN 295
H DR AK D P E++ T GF+ +E+ P+ + L F+ PC+++
Sbjct: 199 HHGLVGDRHR-DAKYYD-MPRLREIS--TQEGFSFGVTQEQGSPILDVLHDFQPPCLMK- 253
Query: 296 NRELVDSKTGEKHYFTGLFL-------CRPTGQGKSMLIVRFGATKRSPLAKLF----PK 344
+ + T E L+ CR G + ++V+ K P F P
Sbjct: 254 ---ITTTFTDEGQLILVLYATPTRPGWCRHIG---TQILVKNPQGKLPPGLGFFALPMPT 307
Query: 345 WYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNL----RSSDTWVAEYRKWMDK- 399
W H AS QDM FL Q + T+ K+ +L+ D +R+W++K
Sbjct: 308 WLGHILASLFLHQDMVFLHYQ-----ERTMAAKDRWLDAVYTPNPQDKMTITFRQWLEKR 362
Query: 400 VGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHV 459
G G+P+ T LP PA+ + L + + H
Sbjct: 363 AGGGVPW---QGTADLP---------------------PAE-----LDKRKLLDVWHTHT 393
Query: 460 IHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTA 519
C+ C + +K + +A A+ V+A+L R A ++ + LA V S A
Sbjct: 394 AECQYCQTALKRLRWARTGSYGLAIAILVVAVLLESRS-IALTGQTSLISLAFVARISIA 452
Query: 520 IAMNTTNF 527
+ + +
Sbjct: 453 LGLTALGY 460
>gi|116075488|ref|ZP_01472748.1| cell death suppressor protein Lls1-like [Synechococcus sp. RS9916]
gi|116067685|gb|EAU73439.1| cell death suppressor protein Lls1-like [Synechococcus sp. RS9916]
Length = 436
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 187/412 (45%), Gaps = 66/412 (16%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRLAKLSEGQLI 137
WTE+W+P+ +D+ P T+ ++ +V++ D + L R + D CPHRL LSEG++
Sbjct: 5 WTEQWWPVAYVRDLDQSKPTRFTLLERDLVIWWDPSAALWRAFPDVCPHRLVPLSEGRIN 64
Query: 138 D-GRLECLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKT 194
+ G LEC YHGW F+GEG+C IPQ + RS C + +QG+++VW
Sbjct: 65 ERGELECPYHGWSFDGEGRCQHIPQAEEGTRSDSLRSRC-DSLPSATAQGLLFVWTGAPE 123
Query: 195 PPNPDKLPWFENFARPGFQD-------VSTIHELPYDHSILLENLMDPAHIPISHDRTDW 247
+PD LP P QD T +LP D LLEN++D +H+P +H RT
Sbjct: 124 AADPDSLPLV-----PQLQDNPESWTVQDTFRDLPMDALTLLENVLDVSHVPFTHHRT-- 176
Query: 248 TAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
+R +A P+ E+T GF+ W G + F F AP ++ ++ +D+K G
Sbjct: 177 VGRRSNAAPVRAEITREDRGGFSAVWEEGPRRGSLGSQFTTFRAPQLMWHD---LDAK-G 232
Query: 306 EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGF 361
T ++ P +G+ L RF RSP +L P+W H KV E D F
Sbjct: 233 FARILTVVYAV-PIRRGECRLFARFPFQFRSPAPRLLLGLRPRWLQHIGNHKVLEDDQVF 291
Query: 362 LSSQNEVLMKETVPT---KELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKV 418
L Q + + YL + +D +V +W+ G G P+ + P +
Sbjct: 292 LHWQERLFAAAGGGAAIDRAFYLPCQ-ADVYVKALYRWVQSNG-GEPF------VGQP-L 342
Query: 419 PAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIK 470
P E AP L +R+ H HC+ CS+ ++
Sbjct: 343 PPRQELAP------------------------LMDRFHSHTRHCRSCSTALR 370
>gi|352094528|ref|ZP_08955699.1| Pheophorbide a oxygenase [Synechococcus sp. WH 8016]
gi|351680868|gb|EHA64000.1| Pheophorbide a oxygenase [Synechococcus sp. WH 8016]
Length = 440
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 168/345 (48%), Gaps = 30/345 (8%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSEGQLI 137
W+E+W+P+ +D+ P T+ +Q +VL+ D GE R ++D CPHRL LSEG++
Sbjct: 5 WSEQWWPVAYVRDLDPTRPQRFTLLEQDLVLWWDAPGESWRAFKDVCPHRLVPLSEGRIN 64
Query: 138 D-GRLECLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKT 194
G+LEC YHGW F+G+G C IPQL A A+ R+AC + QG+++VW +
Sbjct: 65 SAGQLECPYHGWSFDGQGSCRAIPQLGARARSESRRTAC-GSLPTAIGQGLLFVWSGTPS 123
Query: 195 PPNPDKLPWFENFARPG--------FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 246
+ LP G QD T +LP D LLEN++D +H+P +H RT
Sbjct: 124 AADSAALPLVPVLQEQGDGWANGWIVQD--TFRDLPMDALTLLENVLDVSHVPFTHHRT- 180
Query: 247 WTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKT 304
KRE+A P+ +T +GF W G K + F AP ++ ++ +
Sbjct: 181 -VGKRENASPVEAVITREDSQGFEAFWQEGPRKGKLGSQNTHFRAPQLMWHDL----TAK 235
Query: 305 GEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMG 360
G T ++ P +GK L RF +S L ++ P+W H KV E D
Sbjct: 236 GFARILTVVYAV-PISRGKCRLFARFPFQFKSALPRVLVGLRPRWLQHIGNHKVLEDDQV 294
Query: 361 FLSSQNEVLMKE--TVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
FL Q VL + ++ ++ S+D +V +W++ G G
Sbjct: 295 FLHWQERVLETAGGSAAAEQAFVLKTSADVYVKALHRWVNGQGGG 339
>gi|302824059|ref|XP_002993676.1| hypothetical protein SELMODRAFT_137430 [Selaginella moellendorffii]
gi|300138499|gb|EFJ05265.1| hypothetical protein SELMODRAFT_137430 [Selaginella moellendorffii]
Length = 500
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 184/410 (44%), Gaps = 54/410 (13%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSEGQ 135
+DW EWYP+ + +++ P +T+ ++V++ D NG+ + + D+CPHRLA LSEG+
Sbjct: 73 FDWNSEWYPVAIEQELDKGVPHAVTILGNELVVWWDSNGKNWQVFSDKCPHRLAPLSEGR 132
Query: 136 L-IDGRLECLYHGWQFE-GEGKCVKIPQL-PADAKI---PRSACVRTYEVKESQGVVWVW 189
+ +G ++C YHGW F G G C +IPQ P D + PR AC Y E QG++W+
Sbjct: 133 IGENGHIQCSYHGWIFAPGTGSCSRIPQAQPGDLSVRLSPR-ACATVYPSMEQQGILWMN 191
Query: 190 MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTA 249
S + + K P+F F ++PY + L+ENLMDP H+P +H +
Sbjct: 192 FS-ASASSQIKPPFFPVLEDADFVHYWATSDVPYGYEALIENLMDPTHVPFAHHKLQ--G 248
Query: 250 KREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVD---SKTGE 306
R A P+ + V + GF G G+ +P L F + ++++ SK E
Sbjct: 249 NRNKAGPVSYTVNKFDRHGFKGSTGRGDVVFMPP-LSFVMEIRIPPKQKVLSKLWSKLEE 307
Query: 307 KHYFT-GLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFL--- 362
T +F+C P G+S F + P+W H V + D+ L
Sbjct: 308 SDKITYTVFMCVPVLPGRSKAFWSFPRNFAKSIHFYTPRWLAHLRHMLVLDSDLYLLHIM 367
Query: 363 SSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVV 422
+ E +E +PT S+D +V +R+W+ G P + H LP
Sbjct: 368 EQKQERNEREYIPT--------SADAFVLGFRRWLSVYAGGAPGYAPHIDRKLP------ 413
Query: 423 EHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAF 472
SSP K L +RY HV C C + +++F
Sbjct: 414 -------------SSPPKQ--------QLMDRYENHVKRCPTCMAALRSF 442
>gi|359464344|ref|ZP_09252907.1| pheophorbide A oxygenase [Acaryochloris sp. CCMEE 5410]
Length = 481
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 200/465 (43%), Gaps = 62/465 (13%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRL 128
G + + W + W+P+ KD+ T+ +Q +V++ D + E R + D+CPHRL
Sbjct: 32 GGEDPSQFTWQDAWHPIAYVKDLDPYQLSTFTLLEQDLVIWWDQSAETWRVFADQCPHRL 91
Query: 129 AKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGV 185
A LSEG+L DG LEC YHGW F G G+C +IPQ + +S ACV++ QG+
Sbjct: 92 APLSEGRLTADGLLECPYHGWAFSGLGQCCRIPQQVGGQSVEQSRRACVQSLPTTVRQGM 151
Query: 186 VWVWMSQKTP----PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPIS 241
++V+ Q P P P E A + + + +LP+D LLEN++DP+H+P +
Sbjct: 152 LFVYPGQSERAAHIPIPLVAPLEE--APNKWIVLDGVRDLPFDVLTLLENVLDPSHLPFA 209
Query: 242 HDRTDWTAKREDAQPLGFEVTERTDRGFAGRW----GKEKDEPLPNFLRFEAPCVLQNNR 297
H R+ R A P+ E+ +GF G W G +K + F AP ++ +
Sbjct: 210 HHRS--VGDRSVAGPMDLEINHSDRQGFQGIWKTAVGPKKGQFGTQLTTFIAPNLIWH-- 265
Query: 298 ELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSP----LAKLFPKWYFHQNASK 353
D T EK+ + C P +G+ L RF SP L + P W FH +
Sbjct: 266 ---DLTTQEKNRTLTVAYCTPIRKGECRLFARFPFQFASPWPAGLIRYTPSWVFHLLQNS 322
Query: 354 VFEQDMGFLSSQNEVL--MKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHS 411
+ E D FL Q L ++ +P + + +D +V +W+ +
Sbjct: 323 ILEDDQIFLYLQERHLAQQRQGMPIAQAFYMPTQADRFVVALHQWLQRYN---------- 372
Query: 412 TISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKA 471
A + P AIG + RY H +HC C + +
Sbjct: 373 -------------------ADPFPNRPLPPAIGR---EQVIERYHSHTVHCASCRTALSR 410
Query: 472 FSTWKNSLSVVAAALTVLA---ILASGRQWKAFCLASASLCLAGV 513
+ + + A + A +L G K+ +AS S + +
Sbjct: 411 IKRGRQGMVMGALVAWITAQAYLLDWGGTVKSARVASISFIVCTI 455
>gi|224118438|ref|XP_002331482.1| predicted protein [Populus trichocarpa]
gi|222873560|gb|EEF10691.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 143/536 (26%), Positives = 234/536 (43%), Gaps = 77/536 (14%)
Query: 1 MALSLRSLFFSPLLKIPSPKLTP----PTTNVIISLNKTPKSRKCHAVTDRSSTSTVGDH 56
MAL L + S L +PK +P N + + K H S ++
Sbjct: 1 MALLLSTACISKSLTQTNPKASPFSLTKAFNTKQPITRVRKISPLHVAAPPSQSAPSVRK 60
Query: 57 KVLVGPASAEERRGERQV-ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GN 114
+ ++ GE + + + W + WYP+ L +D+ P + + +VL+ D N
Sbjct: 61 EEEEEEYGVDDESGEEVIDSKFTWRDHWYPVSLLEDLDPLLPTPFQLLGRDLVLWFDKAN 120
Query: 115 GELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQ-LPAD-----AK 167
E + D+CPHRLA LSEG++ + G L+C YHGW F+G G C +IPQ LP K
Sbjct: 121 QEWVAFDDKCPHRLAPLSEGRIDENGHLQCSYHGWSFDGCGSCTRIPQALPEGPEARAVK 180
Query: 168 IPRSACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELP 222
PR AC + SQG+++VW + P LP ++F +P F V+ +L
Sbjct: 181 SPR-ACATRFPTMVSQGLLFVWPDENGWERAQATKPPMLP--DDFNKPEFSTVTIQRDLF 237
Query: 223 YDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLP 282
Y + L+EN+ DP+HI +H + T +R+ A+PL F++ GFAG ++ P
Sbjct: 238 YGYDTLMENVSDPSHIDFAHHKV--TGRRDRAKPLEFKLESSGPWGFAG-----ANDGNP 290
Query: 283 NFL-RFEAPCVLQNNRELVDSK---TGEKHYFTGLFLCR---PTGQGKSMLIV-----RF 330
F APC N E +D+K G++ + +++C P GK+ IV F
Sbjct: 291 RITAEFVAPCYYVNKVE-IDTKLPIVGDQKWI--IWICSFNVPMAPGKTRSIVCSARNFF 347
Query: 331 GATKRSPL-AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETV--------PTKELYL 381
T P ++FP+W+ H ++KV++ DM L Q + + +++ +L
Sbjct: 348 QFTMPGPAWWQVFPRWHEHWTSNKVYDGDMIVLQGQEKTFLSQSMGGSADINKQYTKLTF 407
Query: 382 NLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKG 441
+D +V E+R W+ + G+ P FG + L P+ V
Sbjct: 408 TPTQADRFVLEFRGWLRRHGNSKPEWFGLTDKQL--FPSAV------------------- 446
Query: 442 AIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQ 497
+ + +R+ +H C C +F T + L A + S Q
Sbjct: 447 ----LSKREMLDRFEQHTKKCSSCKKAYTSFQTLQKFLIGATIAFCATVGIPSDVQ 498
>gi|427720788|ref|YP_007068782.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
gi|427353224|gb|AFY35948.1| Pheophorbide a oxygenase [Calothrix sp. PCC 7507]
Length = 443
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/440 (28%), Positives = 194/440 (44%), Gaps = 66/440 (15%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSE 133
+++++ + WYP+ +D+ P +TV ++V++K + E R + D+CPHRLA LSE
Sbjct: 3 SEFNFFQHWYPVSPIEDLDSQRPNPVTVLGLRLVIWKPKSSETYRVFLDQCPHRLAPLSE 62
Query: 134 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWV 188
G++ D G L C YHGWQF+ +G C IPQ + ++ C T ++ ++WV
Sbjct: 63 GRIDDKTGNLMCTYHGWQFDAQGICTHIPQAENPQLVTKNQQNLCAVTLPTRQENDLLWV 122
Query: 189 WMSQKTPPNP--DKLPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
W K+ LP A GF S + +L YD L+EN+ DP+H+P +H
Sbjct: 123 WPDAKSVEQAAITPLPLSPQIDANKGFVWNSFVRDLEYDWQTLVENVADPSHVPFAHHGV 182
Query: 246 DWTAKREDAQPLGFEVTERT----DRGFAGRWGKEKDEPLPNFLRFEAPCVLQN--NREL 299
R+ A+P+ + E T + AG + + + FE PC L+ N
Sbjct: 183 Q--GNRDKARPISLSIEESTASLIEVSTAGNFSTK--------ITFEPPCRLEYAINIGN 232
Query: 300 VDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH-QNASKVFEQD 358
D K G Y C P GKS ++ +F L + P+W+ H N + V + D
Sbjct: 233 SDKKMGLVTY------CIPVSPGKSRIVAQFPRNFAQTLHRFIPRWWDHITNRNLVLDGD 286
Query: 359 MGFLSSQNEVLMKE--TVPTKELYLNLRSSDTWVAEYRKWMDKVGHG-MPYHFGHSTISL 415
M LS Q L + T K Y S+D V E+R W DK G +P+ ISL
Sbjct: 287 MILLSQQEYFLQQRQLTESWKTAYKLPTSADRLVIEFRNWFDKYCQGRLPWQ--EVGISL 344
Query: 416 PKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTW 475
P+ + ++ L +RY +H HC C + +K
Sbjct: 345 PEDLTINDNRLVVL-----------------------DRYNQHTRHCSSCRNTLKTIQWL 381
Query: 476 KNSLSVVAAALTVLAILASG 495
+ AA L I+ SG
Sbjct: 382 R------AALLAYFIIVVSG 395
>gi|428211927|ref|YP_007085071.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoria acuminata PCC 6304]
gi|428000308|gb|AFY81151.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoria acuminata PCC 6304]
Length = 469
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 188/432 (43%), Gaps = 57/432 (13%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSEGQ 135
+D E WYP+Y +D+ + T+ + ++ D G+ R ++D+CPHRLA LSEG+
Sbjct: 27 FDVREVWYPVYYLQDLDKSKIMRFTLLGVDLAIWWDKTGQSWRAFEDKCPHRLAPLSEGR 86
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQ 192
+ + G +EC YHGW F GKC IPQ K +S ACVR + E QG+++V+
Sbjct: 87 INEQGWIECPYHGWAFSATGKCETIPQQNEGGKAEQSERACVRNFPTAEHQGLLFVYAGN 146
Query: 193 KTPPNPDKLPWFENFARPGFQDV--STIHELPYDHSILLENLMDPAHIPISHDRTDWTAK 250
K+P + + V +T +LPYD LLEN++D +HIP +H RT
Sbjct: 147 PENAKQTKVPLIDPLEESPDKWVCLNTFRDLPYDALTLLENVLDASHIPYTHHRT--VGN 204
Query: 251 REDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH 308
R +A + EV +GF G W G K F AP ++ ++ L + G
Sbjct: 205 RANASKVDLEVIAAGKQGFEGLWEEGPRKGTLGSQQTHFIAPGLMWHD--LTSKQFGRT- 261
Query: 309 YFTGLFLCRPTGQGKSMLIVR----FGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSS 364
+ P +G+ L R F + + KL P+WY H + + E D FL
Sbjct: 262 --MTVVYATPIRKGECRLFARFPFQFASKVPATFIKLTPQWYSHIGQNAILEDDQIFLYH 319
Query: 365 QNEVLM----KETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPA 420
Q L E + K YL + +D +V +RKW+++ P+
Sbjct: 320 QERYLEAAGGSEKI-AKAFYLPTK-ADLFVLAFRKWVNEY-DADPF-------------- 362
Query: 421 VVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLS 480
P + L +RY H IHC+ CS+ ++ +
Sbjct: 363 -----------------PGESFPPLRSREALLDRYHSHTIHCRSCSTALRRIQKLREMAG 405
Query: 481 VVAAALTVLAIL 492
++AA + A L
Sbjct: 406 ILAAIAWITAPL 417
>gi|434402833|ref|YP_007145718.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
gi|428257088|gb|AFZ23038.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
Length = 443
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 126/444 (28%), Positives = 193/444 (43%), Gaps = 74/444 (16%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSE 133
A++++ + WYPL +D+ P+ +T+ ++V++K E R + D+CPHRLA LSE
Sbjct: 3 AEFNFFQHWYPLSPIEDIAPQRPVPVTLLGIRLVIWKSKLSENYRVFLDQCPHRLAPLSE 62
Query: 134 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPRSACVRTYEVKESQGVVWV 188
G++ D G L C YHGWQF+ +G C IPQ AK R+ CV + V++ ++WV
Sbjct: 63 GRVDDKTGNLMCSYHGWQFDEQGICTHIPQAENPELVAKNQRNFCVVSLPVRQENDLLWV 122
Query: 189 WMSQKTPPNPDKLPWFENFARP---------GFQDVSTIHELPYDHSILLENLMDPAHIP 239
W P+ D N P GF S + +L YD L+EN+ DP+H+P
Sbjct: 123 W------PDADSTELAANTPLPLSPQIDVKKGFVWSSYVRDLEYDWQTLVENVADPSHVP 176
Query: 240 ISHDRTDWTAKREDAQPLGFEVTERTDR----GFAGRWGKEKDEPLPNFLRFEAPCVLQN 295
+H RE A P+ + + T+ AGR+ + FE PC L
Sbjct: 177 FAHHGVQ--GNRETATPIALNIIKSTENLIEASTAGRFQTT--------ITFEPPCRL-- 224
Query: 296 NRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH-QNASKV 354
E S + C P GK ++ +F L + P+W+ H + ++V
Sbjct: 225 --EYAISVPNSDKQLGLVTYCIPVSPGKCRIVAQFPRNFAKTLHRFIPRWWNHIKTRNQV 282
Query: 355 FEQDMGFLSSQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKWMDKVGHG-MPYHFGHS 411
+ DM L Q +L ++ + K Y S+D V E+R W DK G +P+H
Sbjct: 283 LDGDMILLHQQEYLLQQKQLSESWKTAYKLPTSADRLVIEFRNWFDKYCQGKLPWH---- 338
Query: 412 TISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKA 471
G++A P + I A L + Y +H HC C + +
Sbjct: 339 --------------QVGIIA------PERWQINDNRAVIL-DCYKQHTQHCSSCRNAL-- 375
Query: 472 FSTWKNSLSVVAAALTVLAILASG 495
KN + A L I SG
Sbjct: 376 ----KNLQHLQIALLAYFVITISG 395
>gi|186686519|ref|YP_001869715.1| pheophorbide a oxygenase [Nostoc punctiforme PCC 73102]
gi|186468971|gb|ACC84772.1| Pheophorbide a oxygenase [Nostoc punctiforme PCC 73102]
Length = 482
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 165/338 (48%), Gaps = 23/338 (6%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRLAKLSEGQ 135
+D E WYP+ +D+ P T+ +Q IVL+ D N + R + D+CPHRLA LSEG+
Sbjct: 35 FDCQEVWYPVCYIEDLNKSQPTPFTLLEQNIVLWWDKNEQTWRAFIDQCPHRLAPLSEGR 94
Query: 136 LI-DGRLECLYHGWQFEGEGKCVKIPQ--LPADAKIPRSACVRTYEVKESQGVVWVWMSQ 192
+ +G LEC YHGW F G GKC IPQ A++ + ACV T QG+++V+ +
Sbjct: 95 INHEGWLECPYHGWAFSGTGKCEFIPQQIQRTKAEVSQRACVATLATAVYQGMLFVYPGR 154
Query: 193 KTPPNPDKLPWFENFAR--PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAK 250
K+P E + G+ ++T ++PYD L+EN++D +HIP +H RT
Sbjct: 155 AENAAKTKVPIVEPLEQDPDGWICLNTFRDVPYDALTLMENVLDTSHIPYTHHRT--VGN 212
Query: 251 REDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH 308
R + P+ E+ E GF G W G K F AP ++ + +L + G
Sbjct: 213 RANVSPIDLEIIESGKWGFKGTWAEGPRKGTLGRQDTTFIAPGLMWH--DLTSKQYGRT- 269
Query: 309 YFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGFLSS 364
+ P +G+ L RF S L LF P+WY H ++V E D FL
Sbjct: 270 --LTVVYATPIRKGECRLFARFPFKFSSNLPGLFLKLTPRWYSHIGQNRVLEDDQIFLHY 327
Query: 365 QNEVLMK---ETVPTKELYLNLRSSDTWVAEYRKWMDK 399
Q L K TK YL + +D +V + R W+ +
Sbjct: 328 QERYLEKLGGSANFTKAFYLPTK-ADLFVFQLRSWVRQ 364
>gi|414079207|ref|YP_007000631.1| pheophorbide a oxygenase [Anabaena sp. 90]
gi|413972486|gb|AFW96574.1| pheophorbide a oxygenase [Anabaena sp. 90]
Length = 443
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 200/434 (46%), Gaps = 54/434 (12%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSE 133
+++++ + WYPL +D+ P +T+ +++V++K E R + D+CPHRLA LSE
Sbjct: 3 SEFNFFQHWYPLIPIEDLEPHKPKPMTLLGKRLVIWKPTKSETYRVFLDQCPHRLAPLSE 62
Query: 134 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWV 188
G++ D G L C YHGW+F G C ++PQ + ++ CV ++ V++ Q ++WV
Sbjct: 63 GRIEDKTGNLMCSYHGWEFNENGICQRVPQAENPEIVTKNQDNFCVISFPVRQQQELLWV 122
Query: 189 WMSQKTPPNPDKLPWF---ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
W +KT + P + A GF + I +L YD L+EN+ DP+H+P +H
Sbjct: 123 WPDEKTAAIAENTPLPLSPQIDAEKGFVWSNYIRDLEYDWQTLVENVADPSHVPFAHHGV 182
Query: 246 DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
R+ AQP+ + + T + LP + FE PC L+ L TG
Sbjct: 183 Q--GNRDKAQPIPINIVKSTMDLIEVDIARG----LPTTITFEPPCRLEYAISL--GNTG 234
Query: 306 EKHYFTGLFL-CRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASK-VFEQDMGFLS 363
+K GL + C P GKS ++ +F L ++ P+W+ H N V + DM FL
Sbjct: 235 KK---LGLVVYCIPVSPGKSRIVAQFPRNFAKTLHRIIPRWWNHINERHLVLDGDMIFLQ 291
Query: 364 SQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAV 421
Q L ++ + K Y ++D V E+R W DK + S + ++
Sbjct: 292 QQEYYLQQKQLTQSWKTAYKLPTNADRLVIEFRNWFDK--------YCQSKLPWQEI--- 340
Query: 422 VEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSV 481
G++ S P I A + +RY +H HC C + +K + L
Sbjct: 341 ----------GINGSEPT--TINENRA-EVLDRYKQHTQHCSSCRTAVKNLERLQIGL-- 385
Query: 482 VAAALTVLAILASG 495
L I+ SG
Sbjct: 386 ----LAYFVIVISG 395
>gi|87124080|ref|ZP_01079930.1| cell death suppressor protein [Synechococcus sp. RS9917]
gi|86168649|gb|EAQ69906.1| cell death suppressor protein [Synechococcus sp. RS9917]
Length = 439
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 130/460 (28%), Positives = 197/460 (42%), Gaps = 71/460 (15%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLAKLSEGQL- 136
W+E+W+P+ D+ P T+ ++ +VL+ D G+ R + D CPHRL LSEG++
Sbjct: 5 WSEQWWPVAYLCDLDRGRPSRFTLLERDLVLWWDREAGQWRAFDDVCPHRLVPLSEGRIN 64
Query: 137 IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKT 194
+G+LEC YHGW F+G G C +IPQ+ +A+ RS+C R+ +QG+++VW
Sbjct: 65 AEGQLECPYHGWSFDGSGHCRRIPQMTEEARPEGRRSSC-RSLPTASAQGLLFVWSGDPA 123
Query: 195 PPNPDKLPWF-------ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDW 247
+P LP E +A G+ T +LP D LLEN++D +H+P +H RT
Sbjct: 124 SADPAALPLVPVLQEQGEGWA-DGWVVQDTFRDLPMDALTLLENVLDVSHVPFTHHRT-- 180
Query: 248 TAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
+R++A P+ E+T GF W G + + F AP ++ ++ + G
Sbjct: 181 VGRRDNAAPVQAEITREDGTGFEAFWQEGPRRGKLGSQATCFRAPQLMWHDL----TAKG 236
Query: 306 EKHYFTGLFLCRPTGQGKSMLIVR----FGATKRSPLAKLFPKWYFHQNASKVFEQDMGF 361
T ++ P G+ L R F A L L P+W H KV E D F
Sbjct: 237 FARILTVVYAV-PIRPGECRLFARFPFQFQAAAPRLLLGLRPRWLQHIGNHKVLEDDQVF 295
Query: 362 LSSQNEVL---MKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKV 418
L Q VL YL SD +VA +W+ + G G P+
Sbjct: 296 LHWQERVLEAAGGSAAAENAFYLPT-DSDCYVAALHRWVQRQGGG-PF------------ 341
Query: 419 PAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSV---IKAFSTW 475
P + L +R H HC+ CS ++A W
Sbjct: 342 -------------------PGRALPPRQGLEALMDRERSHTRHCRSCSGALQRLRALRPW 382
Query: 476 KNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYA 515
++ ++AAL L QW + L LA A
Sbjct: 383 LIAMLWLSAALVGLG------QWGSISAVGLGLALASGLA 416
>gi|30686966|ref|NP_849444.1| ACD1-like protein [Arabidopsis thaliana]
gi|75248733|sp|Q8W496.1|PTC52_ARATH RecName: Full=Protochlorophyllide-dependent translocon component
52, chloroplastic; AltName: Full=ACD1-like protein;
AltName: Full=Protein TIC 55-IV; AltName:
Full=Translocon at the inner envelope membrane of
chloroplasts 55-IV; Flags: Precursor
gi|17065310|gb|AAL32809.1| Unknown protein [Arabidopsis thaliana]
gi|27311961|gb|AAO00946.1| Unknown protein [Arabidopsis thaliana]
gi|332659689|gb|AEE85089.1| ACD1-like protein [Arabidopsis thaliana]
Length = 559
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 206/512 (40%), Gaps = 121/512 (23%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLAKLSEGQ 135
+DW WYP+ D+ P G V +V++ D N + + D CPHRLA LS+G+
Sbjct: 79 FDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGR 138
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKESQGVVWVWMS 191
+ GRL+C+YHGW F G G C IPQ P D + ACV Y ++W W +
Sbjct: 139 IDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFWPN 198
Query: 192 Q----KTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH----- 242
K +K P+ P F + ++PY + +L+ENLMDPAH+P +H
Sbjct: 199 SDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYGLMR 258
Query: 243 ----------------------------DRTDWTAKREDAQPLGFEVTERTDRGFAGR-- 272
++ D RE +PL V + ++GF +
Sbjct: 259 FPKPKGKYIICISNSCFNPFTNLQILLAEKID----REGGKPLEINVKKLDNKGFFSKQE 314
Query: 273 WGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE-------------KHYFTGLFLCRPT 319
WG + F APCV +++ + + + E K + +F+C P
Sbjct: 315 WG---------YSNFIAPCVYRSSTDPLPEQEHEYPAPAASDKAALSKRRLSLIFICIPV 365
Query: 320 GQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKET------ 373
G+S LI F + K+ P+W FH + + + D+ L + +++
Sbjct: 366 SPGRSRLIWTFPRNFGVFIDKIVPRWVFHIGQNTILDSDLHLLHVEERKILERGPENWQK 425
Query: 374 ---VPTKELYLNLRSSDTWVAEYRKWMDKVGHG-MPYHFGHSTISLPKVPAVVEHAPAGL 429
+PTK SD V +R+W +K + + LP P +
Sbjct: 426 ACFIPTK--------SDANVVTFRRWFNKYSEARVDWRGKFDPFLLPPTPPREQ------ 471
Query: 430 VAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVV--AAALT 487
L +RY+ HV +C C K N+L V+ A++
Sbjct: 472 ---------------------LFDRYWSHVENCSSCKKAHKYL----NALEVILQIASVA 506
Query: 488 VLAILASGRQWKAFCLASASLCLAGVYACSTA 519
++ ++A +Q +A ++ +A V + + +
Sbjct: 507 MIGVMAVLKQTTMSNVARIAVLVAAVLSFAAS 538
>gi|297746465|emb|CBI16521.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 172/410 (41%), Gaps = 89/410 (21%)
Query: 124 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEV 179
CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P D + ACV Y
Sbjct: 2 CPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKACVSVYPS 61
Query: 180 KESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSILL 229
+VW W PN D K P+ P + + E+PY + +L+
Sbjct: 62 TVQNDIVWFW------PNTDPQYKDILMKNKPPYIPELDDPSYTRLMGNREIPYGYEVLI 115
Query: 230 ENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEA 289
ENLMDPAH+P +H TA RE +PL ++ + GF G+ + +P
Sbjct: 116 ENLMDPAHVPYAHYGI-MTADREGGRPLEMKIQKLDRSGFIGKQEGGTSKFIP------- 167
Query: 290 PCVLQNNREL-----------VDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPL 338
PCV + +L V++K + +F+C P G S LI F +
Sbjct: 168 PCVFYVSSDLFIDKTNGSASSVETKKEVQRRMLLIFICIPVSPGNSRLIWTFPRNFGVWV 227
Query: 339 AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKET---------VPTKELYLNLRSSDTW 389
++ P+W FH + + + D+ L + +M VPTK SD
Sbjct: 228 DRVVPRWMFHVGQNLILDSDLYLLHVEERKIMDIGPSNWQKACFVPTK--------SDAC 279
Query: 390 VAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAP 449
V +RKW++K G + +LP P
Sbjct: 280 VVGFRKWLNKYAGGQVDWGTKFSGALPPTPP---------------------------RE 312
Query: 450 NLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTV--LAILASGRQ 497
L +RY+ HV++C C IK N+L VV ++V + I+A+ +Q
Sbjct: 313 QLMDRYWSHVVNCSSCRVAIKGL----NALEVVLQVISVASIGIVAATKQ 358
>gi|170079201|ref|YP_001735839.1| Rieske iron-sulfur protein [Synechococcus sp. PCC 7002]
gi|169886870|gb|ACB00584.1| probable Rieske iron-sulfur protein [Synechococcus sp. PCC 7002]
Length = 452
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 190/452 (42%), Gaps = 53/452 (11%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLY-KDGNGELRCYQDRCPHRLAKLSEGQ 135
+DW E WYP++ +D+ P + + +V++ + + + + D CPHRLA LSEG+
Sbjct: 17 FDWHEAWYPIHFVQDLDKTKPTRFVLLGEPLVIWWQPKTQQWQVFSDVCPHRLAPLSEGR 76
Query: 136 LIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVWVWMSQK 193
++DG LEC YHGWQF G C KIP D + S A V+TY QG+++V+ +
Sbjct: 77 IVDGCLECPYHGWQFAETGACTKIPFQAPDGEAHHSPRAQVKTYASCVKQGLLFVYGGDR 136
Query: 194 TPPNPDKLPWFENFAR-PG-FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKR 251
+P + PG + ++PYD + LLEN++D +H+ +H R
Sbjct: 137 HEAAQTPIPTVPQLDQHPGEWVMADVFRDIPYDATTLLENVLDTSHVAFTHHPR--VGNR 194
Query: 252 EDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHY 309
++A+ +V+E GF G W G + F AP + ++ + +S G+
Sbjct: 195 KNAKEFILDVSEVEKTGFTGNWEEGPRRGTLGSQKTTFFAPAAMWHD--IPESPFGQ--- 249
Query: 310 FTGLFLCRPTGQGKSMLIV----RFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
+ PT +G+ IV RF A K P+W+ H N + E D FL Q
Sbjct: 250 VMTVVYATPTEKGRCRAIVRLPFRFKAAIPRLAFKFTPRWFSHLNQMGILEDDQIFLHLQ 309
Query: 366 NEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHA 425
L K T + SSD +V YR+W+++ G P
Sbjct: 310 ERELAKSTQNYAKTCYLPTSSDLFVLAYRQWVERYGEPFPDE------------------ 351
Query: 426 PAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSL---SVV 482
S + P + L RY H +C C+ + K + +
Sbjct: 352 ------DFSPAEPQQS--------QLLERYHSHTKNCASCTQALHRIQKGKKGVIGLGFL 397
Query: 483 AAALTVLAILASGRQWKAFCLASASLCLAGVY 514
AI + W +A+ + LAG++
Sbjct: 398 LWLGLPFAIFSGLPTWSLGAIATVIIVLAGLW 429
>gi|78184439|ref|YP_376874.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9902]
gi|78168733|gb|ABB25830.1| cell death suppressor protein Lls1-like [Synechococcus sp. CC9902]
Length = 438
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 191/433 (44%), Gaps = 63/433 (14%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE---LRCYQDRCPHRLAKLSEGQ 135
WTE+W+P+ +D+ P T+ ++ +V++ D E R + D CPHRL LSEG+
Sbjct: 5 WTEQWWPIAYLQDLDRRQPNRFTLLERDLVIWWDAQAEQHSWRVFPDVCPHRLVPLSEGR 64
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLPADAK--IPRSACVRTYEVKESQGVVWVWMSQ 192
+ D G LEC YHGW F+GEG C IPQ + K RS C + QG+++VW +
Sbjct: 65 INDEGLLECPYHGWSFDGEGHCRSIPQATDNTKPEARRSRCS-SLPTATGQGLLFVWTGE 123
Query: 193 KTPPNPDKLPWF----ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWT 248
N LP E+ QD T +LP D LLEN++D +H+P +H +T
Sbjct: 124 PDSANQHPLPLVPALEEDPTSWTLQD--TFRDLPMDAVTLLENVLDVSHVPFTHHKT--V 179
Query: 249 AKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE 306
R +A P+ +T + GF W G + + RF+AP ++ ++ + G
Sbjct: 180 GNRNNASPVLATITREAEDGFDAFWEEGPRRGKLGSQTTRFQAPQLMWHDL----TAKGF 235
Query: 307 KHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGFL 362
T ++ P +G+ L RF +S KL P+W H KV E D FL
Sbjct: 236 ARILTVVYAV-PIRRGECRLFARFPFQFQSAAPKLLIGLRPRWLQHIGNHKVLEDDQVFL 294
Query: 363 SSQNEVLMKE--TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPA 420
Q VL + + + +D +VA +W++ G G P+ + SLP+
Sbjct: 295 HWQERVLERAGGSPAADRAFFMPNRADVYVAALHRWLNNNG-GEPF----AGESLPE--- 346
Query: 421 VVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFST---WKN 477
+L +R++ H C+ CS+ ++ T W
Sbjct: 347 ------------------------RRRTTDLMDRFYSHTQSCRSCSTALRRIRTARPWAW 382
Query: 478 SLSVVAAALTVLA 490
++ AAAL L
Sbjct: 383 AVLWGAAALVGLG 395
>gi|254425031|ref|ZP_05038749.1| Pheophorbide a oxygenase family [Synechococcus sp. PCC 7335]
gi|196192520|gb|EDX87484.1| Pheophorbide a oxygenase family [Synechococcus sp. PCC 7335]
Length = 503
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/387 (31%), Positives = 179/387 (46%), Gaps = 56/387 (14%)
Query: 55 DHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN 114
D LV +S EE + WT++WYPL + + P + + + +VL++DG
Sbjct: 19 DESALVRDSSPEE--------SFQWTQQWYPLAVADYLDPQRPHAMQLLGKDVVLWRDGT 70
Query: 115 GELRCYQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQ---LPADAKI-- 168
G RC+++ CPHRLA LSEG++ DGRL C YH W+F+G GKC +IPQ L +AK
Sbjct: 71 GTWRCFENACPHRLAPLSEGRIEADGRLLCAYHAWRFDGSGKCDRIPQSKDLKTEAKYCN 130
Query: 169 -PRSACVRTYEVKESQGVVWVWMSQKTPPN-------PDKLPWFENFARPGFQDVSTIHE 220
PRSA V Y +E QG++WVW P +P ++ + + +
Sbjct: 131 DPRSA-VAAYPTQERQGLIWVWGDSSAAAQQASQQRAPRTVPELDSDSNRVVRASWNFRD 189
Query: 221 LPYDHSILLENLMDPAHIPISH-----DRTDWTAKREDAQPLGFEVTERTDRGFAGRWGK 275
L Y +EN+ DPAH+P+SH DR +T + P EVT T GFA
Sbjct: 190 LAYGWDFFMENVSDPAHVPVSHHGLVGDR--YTGPKFYDMPQLREVT--TQGGFAYSVTP 245
Query: 276 EKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFL-------CRPTGQGKSMLIV 328
D F+ PC+++ + E G L+ CR GQ ++V
Sbjct: 246 TPDTISTVTHDFQPPCLMRISTEF----EGSAQLILVLYATPTLPGQCRHIGQ---QILV 298
Query: 329 RFGATKRSPLAKLF-----PKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNL 383
+ +T ++P F P W H AS QDM FL Q +++ + K +
Sbjct: 299 K-DSTGKTPKGLAFFGLPMPTWLSHILASLFLHQDMVFLHYQEQIVAQRESQRKSWIREV 357
Query: 384 RS---SDTWVAEYRKWMDK-VGHGMPY 406
+ D V +R+W+ K G G+P+
Sbjct: 358 YTPNPQDKMVIAFRQWLAKRAGGGVPW 384
>gi|428208093|ref|YP_007092446.1| Pheophorbide a oxygenase [Chroococcidiopsis thermalis PCC 7203]
gi|428010014|gb|AFY88577.1| Pheophorbide a oxygenase [Chroococcidiopsis thermalis PCC 7203]
Length = 474
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 165/341 (48%), Gaps = 24/341 (7%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRLAKLSE 133
A +D E WYP++ +D+ P T+ Q I ++ + E R ++D+CPHRLA LS+
Sbjct: 25 AFFDCQEVWYPVHYVQDLDKSKPTPFTLLGQDIAIWWEQQAECWRVFEDKCPHRLAPLSQ 84
Query: 134 GQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTY-EVKESQGVVWVW 189
G++ DG LEC YHGW F G G C +IPQ A S ACVR+ + QG+++V+
Sbjct: 85 GRIAEDGLLECPYHGWAFAGAGDCQRIPQQVAGQAAVTSPRACVRSLPTIVVKQGLLFVY 144
Query: 190 MSQKTPPNPDKLPWFENFARP--GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDW 247
+ K+P E G+ + T +LPYD L+EN++D +H+P +H R+
Sbjct: 145 PGKAENATKTKVPVIEPLEESLEGWVCIDTFRDLPYDALTLMENVLDASHVPFTHHRS-- 202
Query: 248 TAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
R +A + EV E GF G W G + F AP ++ ++ L + G
Sbjct: 203 VGNRANASSVELEVVESGKHGFTGVWQEGPRRGTLGRQDTTFVAPGLMWHD--LTSKQFG 260
Query: 306 EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPL----AKLFPKWYFHQNASKVFEQDMGF 361
T ++ P +G+ L RF S L KL P+WY H + V E D F
Sbjct: 261 RT--LTAVY-ATPIRKGECRLFARFPFKFASKLPGWIIKLTPRWYSHLGQNSVLEDDQIF 317
Query: 362 LSSQNEVLMKETVP---TKELYLNLRSSDTWVAEYRKWMDK 399
L Q L TK YL + +D +V E R+W+++
Sbjct: 318 LHYQERYLEAGGGSGNFTKAFYLPTQ-ADAFVVELRQWVNQ 357
>gi|294464913|gb|ADE77961.1| unknown [Picea sitchensis]
Length = 480
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 187/447 (41%), Gaps = 80/447 (17%)
Query: 63 ASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQ 121
+S +E++G+ ++W WYP D+ P TV IV++ D + + +
Sbjct: 77 SSNDEQQGDE--GKFNWFSHWYPAAPEYDLDKRVPHAFTVMGLDIVVWWDKRSQTWQVFD 134
Query: 122 DRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTY 177
D CPHR A LSEG++ DG L+C YHGW F +G C IPQ P+D + AC TY
Sbjct: 135 DSCPHRRAPLSEGRIDEDGDLQCSYHGWCFGPKGDCKYIPQEPSDGPRVHTSKRACASTY 194
Query: 178 EVKESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSI 227
+ QG++W W PN D K P + P F ++ +LPY + I
Sbjct: 195 PSLQQQGIIWFW------PNTDPQFKDTALEKKPPLIPALSDPSFPCTLSMRDLPYGYEI 248
Query: 228 LLENLMDPAHIPISH------DRTDWT--AKREDAQPLGFEVTERTDRGFAGRWGKEKDE 279
L ENLMDP+H+P +H W + + +PL + + GF G+
Sbjct: 249 LTENLMDPSHVPYAHYGLGSQTPMPWNNISFKRAGRPLDLCLERLDESGFRGK------- 301
Query: 280 PLPNFLRFEAPCVLQNNRELVDSKTGEKH-YFTG-----------LFLCRPTGQGKSMLI 327
+ F F PCV ++ SK G+ +G +F+C P G+S LI
Sbjct: 302 QVTGFSNFTPPCVYVSHHTFKTSKEGKPQPSISGTEQEKMKTIFFIFICIPVSPGRSRLI 361
Query: 328 VRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMK--ETVPTKELYLNLRS 385
F + +L P+W H + + D+ FL + L +T K Y+ +
Sbjct: 362 WAFPRNFALWMYRLLPRWLTHIQQNLFPDSDLYFLHLEERKLQNYGKTNWEKACYVPT-A 420
Query: 386 SDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGT 445
+D +V +RKW+ + + +G S G SP K
Sbjct: 421 ADAFVVAFRKWLKRYANNG-VDWGKS------------------FDGSLPPSPPKE---- 457
Query: 446 MHAPNLANRYFRHVIHCKGCSSVIKAF 472
L +RY HV+ C+ C + F
Sbjct: 458 ----QLMDRYRSHVVKCRSCKGALNVF 480
>gi|119493134|ref|ZP_01624040.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
gi|119452788|gb|EAW33964.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
Length = 443
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 196/457 (42%), Gaps = 51/457 (11%)
Query: 74 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLS 132
V+++++ + WYPL +D+ P +T+ +V++K + + + + D CPHRLA LS
Sbjct: 2 VSEFNFFKNWYPLSPVEDLNPQQPTPVTLLGINLVIWKPKSSQTYQVFLDECPHRLAPLS 61
Query: 133 EGQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVW 187
EG++ + G L C YHGW+F+ G C IPQ + ++ C + +E+ ++W
Sbjct: 62 EGRVDENTGNLMCSYHGWEFDQNGICTSIPQAEKPEIVSKNKENFCATQFPTQEANDLLW 121
Query: 188 VWMSQKTPPNPDKLPWF---ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 244
VW + K P + A GF S + +L YD L+EN+ DP+H+P +H
Sbjct: 122 VWADPNSSEQAAKTPLPLSPQIDASQGFVWSSFVRDLEYDWQTLVENVADPSHVPFAHHG 181
Query: 245 TDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKT 304
R+ P+ ++ E ++ + + FE PC L+ E
Sbjct: 182 VQ--GNRKKGSPIHLKIIESNLNLIEAKYQGFFNTKI----TFEPPCRLEYAIEF----- 230
Query: 305 GEKHYFTGLF-LCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH-QNASKVFEQDMGFL 362
G GL C P GKS ++ +F L K+ P+W+ H + + V + DM FL
Sbjct: 231 GSDGKQVGLVTYCLPVSPGKSRIVAQFTRNFSQRLNKIIPRWWEHVKTRNLVLDGDMIFL 290
Query: 363 SSQNEVLMKE--TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPA 420
Q +L ++ T K Y +D V E+RKW ++ G
Sbjct: 291 HQQERLLQQKQKTESWKTAYKLPTEADRLVIEFRKWFEQYSGG----------------- 333
Query: 421 VVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLS 480
P L + P P + +RY +H HC C +KA W+ L
Sbjct: 334 ---KLPWKLATSQTEVLPLNKT-----RPEILDRYQQHTQHCSSCRGALKAIKRWQMGLL 385
Query: 481 V-VAAALTVLAILASGRQWKA-FCLASASLCLAGVYA 515
+ A++ AIL + +A +L G+YA
Sbjct: 386 IYFIIAISTAAILPDFWRLRAGLPFVLTALVGLGIYA 422
>gi|158333261|ref|YP_001514433.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
gi|158303502|gb|ABW25119.1| pheophorbide A oxygenase [Acaryochloris marina MBIC11017]
Length = 467
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 207/469 (44%), Gaps = 76/469 (16%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRLAKLSEGQ 135
+DW E WYP+ KD+ + T+ D+ +V++ D N R + D+CPHRLA+LSEG+
Sbjct: 23 FDWQEVWYPIAYVKDLDKEKLTTFTLLDRDLVIWWDHNANTWRVFADQCPHRLARLSEGR 82
Query: 136 LI-DGRLECLYHGWQFEGEGKCVKIPQLPA--DAKIPRSACVRTYEVKESQGVVWVWMSQ 192
+ DG +EC YHGW F G G+C +IPQ + A+ ACV + + QG+++ + Q
Sbjct: 83 IDEDGLIECPYHGWAFSGTGECERIPQQVSGRSAESSPRACVDSLPISIQQGLLFAYAGQ 142
Query: 193 ----KTPPNPDKLPWFEN----FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 244
P P P E+ GF+D LPYD LLEN++DP+H+P +H R
Sbjct: 143 PERAALTPVPIVGPIEESPDDWIILDGFRD------LPYDVLTLLENVLDPSHLPYTHHR 196
Query: 245 TDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDS 302
+ R +A P+ EV E +GF G W G + + F AP ++ ++ L S
Sbjct: 197 S--VGNRSNAGPVELEVMESGKQGFYGVWEEGPRQGKLGTQTTTFVAPGLMWHD--LTSS 252
Query: 303 KTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQD 358
+ G + P +G+ + RF S + P W+ H + + E D
Sbjct: 253 QFGRT---LTVVYATPVRKGECRIFARFPFQFSSKVPAWMISHTPTWFSHLGQNAILEDD 309
Query: 359 MGFLSSQNEVLMKETVPTKEL----YLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTIS 414
FL Q E ++ T +K + YL R +D +V +W ++ P+
Sbjct: 310 QIFLHFQ-ERYLERTKDSKSIAQAFYLPTR-ADRFVLALHQWQERF-QADPF-------- 358
Query: 415 LPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFST 474
P + L +RY+ H ++C CS +K
Sbjct: 359 -----------------------PGQSLPPERTREQLLDRYYSHTVNCASCSQALKNVKR 395
Query: 475 WKNSLSVVA-AALTVLAILASGRQWKAFCLASASLCLAG-VYACSTAIA 521
+ + +A A T+ +LA G F + S L +A V S+A+A
Sbjct: 396 LRKVMVGLALVAWTLTPLLAFG-----FGVFSIKLSIAATVTIFSSAVA 439
>gi|16330378|ref|NP_441106.1| hypothetical protein slr1747 [Synechocystis sp. PCC 6803]
gi|383322119|ref|YP_005382972.1| hypothetical protein SYNGTI_1210 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325288|ref|YP_005386141.1| hypothetical protein SYNPCCP_1209 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491172|ref|YP_005408848.1| hypothetical protein SYNPCCN_1209 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436439|ref|YP_005651163.1| hypothetical protein SYNGTS_1210 [Synechocystis sp. PCC 6803]
gi|451814536|ref|YP_007450988.1| hypothetical protein MYO_112210 [Synechocystis sp. PCC 6803]
gi|1652868|dbj|BAA17786.1| slr1747 [Synechocystis sp. PCC 6803]
gi|339273471|dbj|BAK49958.1| hypothetical protein SYNGTS_1210 [Synechocystis sp. PCC 6803]
gi|359271438|dbj|BAL28957.1| hypothetical protein SYNGTI_1210 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274608|dbj|BAL32126.1| hypothetical protein SYNPCCN_1209 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359277778|dbj|BAL35295.1| hypothetical protein SYNPCCP_1209 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407958298|dbj|BAM51538.1| hypothetical protein BEST7613_2607 [Synechocystis sp. PCC 6803]
gi|451780505|gb|AGF51474.1| hypothetical protein MYO_112210 [Synechocystis sp. PCC 6803]
Length = 469
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 129/477 (27%), Positives = 208/477 (43%), Gaps = 68/477 (14%)
Query: 63 ASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQ 121
A+A G + +D WYPL +D+ P T+ + +V++ + N + R Y
Sbjct: 14 ANAPFPAGGLDQSKFDCRAVWYPLAYEEDLDKRKPTRFTLLGEDLVIWWEANSQQWRVYA 73
Query: 122 DRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQ--LPADAKIPRSACVRTYE 178
D+CPHRLA LSEG++ G+LEC YHGW F G G+C IPQ A + ACVR+
Sbjct: 74 DQCPHRLAPLSEGRINKAGQLECPYHGWTFAGSGQCQAIPQQHTGGQAHTSKRACVRSLP 133
Query: 179 VKESQGVVWVWMSQKTPPNPDKLPWFE--NFARPGFQDVSTIHELPYDHSILLENLMDPA 236
+ +QG+++ + + LP + + + + ++T +LPYD L+EN++D +
Sbjct: 134 TQVAQGLLFAFPGETDQAEKVALPLVDVLDGDQSEWVCLNTFRDLPYDAFTLMENVLDSS 193
Query: 237 HIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQ 294
HIP +H +T KR + P+ E+ +GF G W G K F AP ++
Sbjct: 194 HIPYTHHKT--VGKRSNVSPVDLEIIHGDRQGFTGIWEEGPRKGTLGKQTTTFIAPGLMW 251
Query: 295 NNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQN 350
+ +L + G + P G+ L RF S +L P+WY H
Sbjct: 252 H--DLTSKQFGRT---LTVVYATPIRPGECRLFARFPFKFPSKFPRLVIGFTPRWYSHLG 306
Query: 351 ASKVFEQDMGFLSSQNEVLM-KETVPT--KELYLNLRSSDTWVAEYRKWMDKVGHGMPYH 407
++V E D FL Q + K P K+ YL + +D +VAE+ +W+++
Sbjct: 307 QNRVLEDDQIFLHFQERFVQGKGGSPNYEKDCYLPTK-ADLFVAEFHRWIEQY---QVKP 362
Query: 408 FGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSS 467
FG S LP +V + L +RY H HC C +
Sbjct: 363 FGDS--PLPDRQSVEQ---------------------------LMDRYHSHTEHCHSCRN 393
Query: 468 VIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVYACSTAIAMNT 524
+ + + A+ ++ ++ CL ASL LA +A + + T
Sbjct: 394 ALANI----EKIQTGSLAIAIICLV---------CLPVASLGLAPNFALGLGLTVLT 437
>gi|384251580|gb|EIE25057.1| hypothetical protein COCSUDRAFT_65076 [Coccomyxa subellipsoidea
C-169]
Length = 560
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 133/512 (25%), Positives = 217/512 (42%), Gaps = 81/512 (15%)
Query: 64 SAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDR 123
+A E+ + +DW ++WYPL +D+ P + + Q++VL+ DG G+ RC+QD+
Sbjct: 73 AAGEQEQIKSEQPFDWAKQWYPLGFLEDLDPKVPHPVELLSQRLVLWCDGQGQWRCFQDK 132
Query: 124 CPHRLAKLSEGQL--IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVR------ 175
CPHRLA LSEG++ DG L C YHGW+F+GEGKC IPQ DAK SAC
Sbjct: 133 CPHRLAPLSEGRIEPSDGTLMCSYHGWRFDGEGKCTDIPQ-SLDAKANASACANPRSCAI 191
Query: 176 TYEVKESQGVVWVW----------MSQKTPPNPDKLPWFENFARPGFQDVSTI-----HE 220
++ + QG VWV+ + P L E+ G + + +
Sbjct: 192 SHPTQVLQGKVWVYGEGGPRTFIDSAAVQPARAPNLAVGESVREAGGGEALRLVQPYTRD 251
Query: 221 LPYDHSILLENLMDPAHIPISHDRTDWTAKREDA---------QPLGFEVTERTDRGFAG 271
PY +L ENL+DP+H+ SH +ED+ +P + T
Sbjct: 252 FPYAWDVLAENLLDPSHVNFSHHGIIGDRDKEDSGLTRISPGPEPAAAPSAQDTISMEVE 311
Query: 272 RWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFG 331
W ++ + ++F APC++Q L T +++ PT GKS ++
Sbjct: 312 TWVRQARKVDKWGVQFIAPCLIQWKFRLPWGNTNTLNFYM-----IPTAPGKSRFMLDSY 366
Query: 332 ATKRS-PLAKLFPKWYFH-------QNASKVFEQDMGFLSSQNEVLMKETVPT----KEL 379
K PL L YF + ++++ + D L Q + +E ++
Sbjct: 367 TQKEGMPLPVLLILKYFAIPWLPHLRMSNRILDGDTALLHWQGHSVAREAKEEGRTWRQA 426
Query: 380 YLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPA 439
Y +D +VA++R+W+D+ G P + S LP + E
Sbjct: 427 YFMPTPADRYVAKFRQWLDERAGGGPTPYDPSH-PLPPLETSKE---------------- 469
Query: 440 KGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWK 499
+ +R+ H +HCK C + + + +V+ AL +L + A Q +
Sbjct: 470 ----------TILDRWNSHTMHCKACQQGFRIVQAAQIAAAVL-GALCMLGLSAVLGQGR 518
Query: 500 AFCLASASLCLAGVYACSTAIAMNTT---NFI 528
+L AG C+ A + + NFI
Sbjct: 519 PLLSRLPALLGAGAIVCAVAWRLLKSFKQNFI 550
>gi|17231846|ref|NP_488394.1| hypothetical protein alr4354 [Nostoc sp. PCC 7120]
gi|17133490|dbj|BAB76053.1| alr4354 [Nostoc sp. PCC 7120]
Length = 443
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 123/434 (28%), Positives = 192/434 (44%), Gaps = 56/434 (12%)
Query: 76 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSEG 134
++++ + WYP+ +D+ P +T+ ++V++K + E R + D+CPHRLA LSEG
Sbjct: 4 EFNFFQHWYPVSPIEDLDPKRPTPVTLLGIRLVIWKPQSSEGFRIFIDQCPHRLAPLSEG 63
Query: 135 QLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWVW 189
++ D G L C YHGWQF+ EG C IPQ + ++ CV + V++ ++WVW
Sbjct: 64 RVDDKTGNLMCSYHGWQFDPEGVCTHIPQAENPEIVTKNQKDFCVISLPVRQQNDLLWVW 123
Query: 190 MSQKTPPNPDKLPW---FENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 246
K+ D+ P + A GF S + +L YD L+EN+ DP+H+P +H
Sbjct: 124 PDVKSQELADQTPLPLSPQVDASKGFVWSSFVRDLEYDWQTLVENVADPSHVPFAHHGVQ 183
Query: 247 WTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE 306
RE A+ + + T G D + FE PC L+ + G+
Sbjct: 184 --GNREQARATPISIMQST----PGLIEAVADGRFKAKITFEPPCRLEYAISI--GNDGK 235
Query: 307 KHYFTGLF-LCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH-QNASKVFEQDMGFLSS 364
K GL C P GKS ++ +F L L P+W+ H + + V + DM L
Sbjct: 236 K---VGLVTYCLPVSPGKSRIVAQFPRNFAKILYHLTPRWWDHVKTRNLVLDGDMILLKQ 292
Query: 365 QNEVLMKETVPT--KELYLNLRSSDTWVAEYRKWMDKVGHG-MPYHFGHSTISLPKVPAV 421
Q L + + K +Y S+D V E+RKW DK G +P+
Sbjct: 293 QEHFLQERQLSASWKTVYKMPTSADRLVIEFRKWFDKYCEGQLPWK-------------- 338
Query: 422 VEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSV 481
G++ S +G+ L +RY +H HC C + KN +
Sbjct: 339 --------EVGIAIS---EGSTINDSRDTLLDRYKQHTQHCSSCRDAL------KNIKRL 381
Query: 482 VAAALTVLAILASG 495
L AI+ SG
Sbjct: 382 QVILLGYFAIIISG 395
>gi|75907526|ref|YP_321822.1| Rieske (2Fe-2S) protein [Anabaena variabilis ATCC 29413]
gi|75701251|gb|ABA20927.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 443
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 188/416 (45%), Gaps = 64/416 (15%)
Query: 76 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSEG 134
++++ + WYP+ +D+ P +T+ ++V++K + + R + D+CPHRLA LSEG
Sbjct: 4 EFNFFQHWYPVSPIEDLDPKRPTPVTLLGIRLVIWKPKSSDSFRIFIDQCPHRLAPLSEG 63
Query: 135 QLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWVW 189
++ D G L C YHGWQF+ EG C +IPQ + ++ CV + V++ ++WVW
Sbjct: 64 RIDDKTGNLMCSYHGWQFDTEGVCTRIPQAENPEIVTKNQKDFCVNSLPVRQENDLLWVW 123
Query: 190 -------MSQKTP----PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHI 238
++ +TP P D A GF S + +L YD L+EN+ DP+H+
Sbjct: 124 PDVNSQELAHQTPLPLSPQVD--------ASKGFVWTSFVRDLEYDWQTLVENVADPSHV 175
Query: 239 PISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRE 298
P +H ++ A+P+ + G D + + FE PC L E
Sbjct: 176 PFAHHGVQGNREQGRARPISIM------QSTPGLIEAVADGLVTAKITFEPPCRL----E 225
Query: 299 LVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH-QNASKVFEQ 357
S + + C P GKS ++ +F L +L P+W+ H + + V +
Sbjct: 226 YAISVGNDGKQLGLVTYCLPVSPGKSRIVAQFPRNFAKTLHRLTPRWWDHIKTRNLVLDG 285
Query: 358 DMGFLSSQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKWMDK-VGHGMPYHFGHSTIS 414
DM L+ Q ++ + + K Y S+D V E+RKW DK G+P+ I
Sbjct: 286 DMILLNQQEHLIQQRQLSASWKTAYKMPTSADRLVIEFRKWFDKYCDGGLPWK--EVGIP 343
Query: 415 LPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIK 470
+P+ A+ ++ L +RY +H HC C + +K
Sbjct: 344 IPEAAAINDNRDV-----------------------LLDRYKQHTRHCSSCRNTLK 376
>gi|359462313|ref|ZP_09250876.1| pheophorbide A oxygenase [Acaryochloris sp. CCMEE 5410]
Length = 488
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 131/469 (27%), Positives = 205/469 (43%), Gaps = 76/469 (16%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRLAKLSEGQ 135
+DW E WYP+ KD+ + T+ D+ +V++ D N R + D+CPHRLA+LSEG+
Sbjct: 44 FDWQEVWYPIAYVKDLDKEKLTTFTLLDRDLVIWWDHNANTWRVFADQCPHRLARLSEGR 103
Query: 136 LI-DGRLECLYHGWQFEGEGKCVKIPQLPA--DAKIPRSACVRTYEVKESQGVVWVWMSQ 192
+ DG +EC YHGW F G G C +IPQ + A+ ACV + + QG+++ + Q
Sbjct: 104 IDEDGLIECPYHGWAFSGTGDCERIPQQVSGRSAESSPRACVDSLPISIQQGLLFAYAGQ 163
Query: 193 ----KTPPNPDKLPWFEN----FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 244
P P P E+ GF+D LPYD LLEN++DP+H+P +H R
Sbjct: 164 PERAALTPVPIVGPIEESPDDWIILDGFRD------LPYDVLTLLENVLDPSHLPYTHHR 217
Query: 245 TDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDS 302
+ R +A P+ EV E +GF G W G + + F AP ++ ++ L S
Sbjct: 218 S--VGNRSNAGPVELEVMESGKQGFYGVWEEGPRQGKLGTQTTTFVAPGLMWHD--LTSS 273
Query: 303 KTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQD 358
+ G + P +G+ + RF S + P W+ H + + E D
Sbjct: 274 QFGRT---LTVVYATPVRKGECRIFARFPFQFSSKVPAWMISHTPTWFSHLGQNAILEDD 330
Query: 359 MGFLSSQNEVLMKETVPTKEL----YLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTIS 414
FL Q E ++ T +K + YL R +D +V +W ++ P+
Sbjct: 331 QIFLHFQ-ERYLERTKDSKSIAQAFYLPTR-ADRFVLALHQWQERF-QADPF-------- 379
Query: 415 LPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFST 474
P + L +RY H ++C CS +K
Sbjct: 380 -----------------------PGQSLPPERTREQLLDRYHSHTVNCASCSQALKNVKR 416
Query: 475 WKNSLSVVA-AALTVLAILASGRQWKAFCLASASLCLAG-VYACSTAIA 521
+ + +A A T+ +LA G F + S L +A V S+A+A
Sbjct: 417 LRKVMVGLALVAWTLTPLLAFG-----FGVFSIKLSIAATVTIFSSAVA 460
>gi|218440057|ref|YP_002378386.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
gi|218172785|gb|ACK71518.1| Pheophorbide a oxygenase [Cyanothece sp. PCC 7424]
Length = 442
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 201/459 (43%), Gaps = 59/459 (12%)
Query: 76 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSEG 134
++++ ++WYPL +D+ P +T+ ++V++K + + + + D+CPHRLA LSEG
Sbjct: 4 EFNFFQQWYPLSPVEDLDPKRPTPVTLLGLRLVIWKPPSSDTYQVFIDQCPHRLAPLSEG 63
Query: 135 QL--IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWVW 189
++ G L C YHGW+F+ +G C +IPQ + CVR + ++ ++WVW
Sbjct: 64 RIDPKTGYLMCSYHGWEFDTQGTCQRIPQAEKPEIVQEKVQQWCVRVFPTRQENDLLWVW 123
Query: 190 MSQKTP----PNPDKL-PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 244
+ + P L P + A+ GF S + +L YD L+EN+ DP+H+P SH
Sbjct: 124 PDENSAELAASTPLPLSPLLD--AKKGFVWSSMVRDLDYDWQTLVENVADPSHVPFSHHG 181
Query: 245 TDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKT 304
RE A+P+ ++ E K + FE PC L+ N
Sbjct: 182 IQ--GDREKARPVPIKIIESLPHRIQATVEIRKG----TTITFEPPCHLEYN-----ISV 230
Query: 305 GEKHYFTGLF-LCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH-QNASKVFEQDMGFL 362
G++ GL C P GKS ++ +F L P+W+ H + V + DM L
Sbjct: 231 GDQGKQVGLVTYCIPVMPGKSRIVAQFPRNFAKTFHHLTPRWWNHIMERNAVLDGDMILL 290
Query: 363 SSQNEVLMK--ETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG-MPYHFGHSTISLPKVP 419
Q L + + K Y S+D V E+R W DK G +P++ T PK+
Sbjct: 291 QQQEYFLRQREQQESWKTAYKMPTSADRLVTEFRNWFDKYCQGQLPWNTVGITPDPPKIN 350
Query: 420 AVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSL 479
E + +RY +H HC+ C + +K + L
Sbjct: 351 DRRE--------------------------EVLDRYRQHTQHCRSCRNALKTVQKMQIFL 384
Query: 480 SVVAAALTVLAILASGRQWK---AFCLASASLCLAGVYA 515
+ A+TV + QW+ F L +L G+Y+
Sbjct: 385 -LAFFAVTVATVAVLPDQWRLSLGFPLIIVALLGLGLYS 422
>gi|87303595|ref|ZP_01086374.1| cell death suppressor protein Lls1-like [Synechococcus sp. WH 5701]
gi|87281819|gb|EAQ73783.1| cell death suppressor protein Lls1-like [Synechococcus sp. WH 5701]
Length = 457
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 176/422 (41%), Gaps = 68/422 (16%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG-------NGELRCYQDRCPHRLAKL 131
W WYP+ +D+ P G T+ +VL+ D G+ R + D CPHRL L
Sbjct: 21 WRNAWYPVAFLRDLDPARPTGFTLLGDDLVLWFDRKGDAAQPGGQWRAFADVCPHRLVPL 80
Query: 132 SEGQL-IDGRLECLYHGWQFEGEGKCVKIPQL-----PADAKIPRSACVRTYEVKESQGV 185
SEG+L G LEC YHGW F+G+G+C IPQ P+D RS+C R Y QG+
Sbjct: 81 SEGRLNAAGELECPYHGWTFDGQGRCTAIPQASEGSQPSDR---RSSC-RAYATASGQGM 136
Query: 186 VWVWMSQKTPPNPDKLPWFENF--ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
++V+ LP G+ T +LPYD LLEN++D +H+P +H
Sbjct: 137 LFVFAGAPEAAAAVPLPLVPVLEETEAGWLVQDTFRDLPYDALTLLENVLDVSHVPFTHH 196
Query: 244 RTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVD 301
T +RE A P+ + + GF+G W G + + F F AP ++ ++
Sbjct: 197 AT--VGRRETAGPVDLRLEQAGPGGFSGVWEEGPRRGKLGSQFTTFLAPGLMWHDL---- 250
Query: 302 SKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSP----LAKLFPKWYFHQNASKVFEQ 357
+ G T ++ PT G+ L RF S L +L P+W H V E
Sbjct: 251 TARGFARILTVVY-ATPTRPGECRLFARFPFQFESSWPGRLLRLRPQWLQHIGNHTVLED 309
Query: 358 DMGFLSSQNEVLMKE---TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTIS 414
D FL Q VL ++ +L +D +V R W+ + G G P+
Sbjct: 310 DQIFLHWQERVLEARGGSAALSRACHLAT-GADAYVKALRDWVVR-GAGEPFP------D 361
Query: 415 LPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFST 474
P P + A L RY H HC+ CS ++
Sbjct: 362 QPLPPRLGRRA-------------------------LVERYESHTRHCRSCSGALRQIRR 396
Query: 475 WK 476
W+
Sbjct: 397 WR 398
>gi|428224503|ref|YP_007108600.1| Pheophorbide a oxygenase [Geitlerinema sp. PCC 7407]
gi|427984404|gb|AFY65548.1| Pheophorbide a oxygenase [Geitlerinema sp. PCC 7407]
Length = 440
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 192/436 (44%), Gaps = 65/436 (14%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG-NGELRCYQDRCPHRLAKLSEGQ 135
+D+ + WYP+ +D+ + P + V ++IV++K + R + D+CPHRLA LSEG+
Sbjct: 6 FDFLQHWYPVSPLEDLDPECPTPVVVLGKRIVIWKPRFSDHYRAFLDQCPHRLAPLSEGR 65
Query: 136 LID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWVWM 190
+ + G L C YHGWQF+ +G C +IPQ + ++ CV ++ G++WVW
Sbjct: 66 VDEKTGHLMCSYHGWQFDEQGTCTQIPQAEDSELVAKNRDRYCVTALPMQAVNGLLWVW- 124
Query: 191 SQKTPPNPDKLPWFENFARP---------GFQDVSTIHELPYDHSILLENLMDPAHIPIS 241
P+PD A P F S + +L YD L+ENL DP+H+P +
Sbjct: 125 -----PDPDSAHLASAQALPLSPYWNAGSEFVWASIVRDLEYDWQTLVENLADPSHVPFA 179
Query: 242 HDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL-V 300
H +RE AQP ++ E T R + + + F PC L+ L
Sbjct: 180 HHGVQ--GRRERAQPTPIKIVESTQ----DRIEAKSEGSFTTKITFTPPCHLEYAISLGG 233
Query: 301 DSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNA-SKVFEQDM 359
D + G Y C P GKS ++ +F L ++ P+W+ H + + + + DM
Sbjct: 234 DRQVGLVTY------CVPVAPGKSRIVAQFSRNFAKRLHQITPRWWDHISVRNSILDGDM 287
Query: 360 GFLSSQNEVLMK--ETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPK 417
L Q + L + +T K Y S+D V E+R+W+D+ G
Sbjct: 288 ILLHYQEKELQQRSQTEDWKTAYKMPTSADRLVIEFRRWIDQYCQG-------------- 333
Query: 418 VPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWK- 476
P G + K +G +L +RY +H + C C +K +
Sbjct: 334 ------KLPWG-----ELENDQKMPLGDRQ--HLLDRYHQHTLICSSCRRALKNLHRLQI 380
Query: 477 NSLSVVAAALTVLAIL 492
L+ AL+ A++
Sbjct: 381 GLLAYFGVALSAAALV 396
>gi|17229589|ref|NP_486137.1| cell death suppressor protein [Nostoc sp. PCC 7120]
gi|17131188|dbj|BAB73796.1| cell death suppressor protein [Nostoc sp. PCC 7120]
Length = 499
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 201/469 (42%), Gaps = 79/469 (16%)
Query: 64 SAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDR 123
+A E + ++ + WT++WYP+ + + + P + + + IVL++DG+ + RC++D
Sbjct: 19 NATEEQSSKEENIFQWTKQWYPVAVVEFLDPSRPHAMQLLGKDIVLWRDGSSQWRCFEDF 78
Query: 124 CPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTY 177
CPHRLA LSEG++ DG L C YH W+F+ EG CV IPQ + ++ +C Y
Sbjct: 79 CPHRLAPLSEGRVEADGTLLCAYHAWRFDAEGNCVSIPQSKDEQTAAKNCESQKSCAVVY 138
Query: 178 EVKESQGVVWVWMS-------QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLE 230
+E QG++WVW + P +P E+ + + +LPY +E
Sbjct: 139 PTQERQGLLWVWAEAGEQAKVESQLQTPRIVPELEDNSGKVIKSPWNFRDLPYGWDYFME 198
Query: 231 NLMDPAHIPISH-----DRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFL 285
N+ DPAH+P+SH DR AK D P+ T+ GFA + +
Sbjct: 199 NVSDPAHVPVSHHGIIGDRYQ-DAKFYDMIPIRHISTQ---DGFAFEIQPTQGNTVQAIH 254
Query: 286 RFEAPCVL------QNNRELVDSKTGE-------KHYFTGLFLCRPTGQGKSMLIVRFGA 332
F+ PC + ++ +L+ + +H +F+ P G+ K + FG
Sbjct: 255 DFQPPCYMRIASTSEDGGQLILALYATPTRPGWCRHIGCQVFVKNPQGK-KPQGLSFFGL 313
Query: 333 TKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNL----RSSDT 388
PL P W H AS QDM FL Q +++ + +LN D
Sbjct: 314 ----PL----PVWLVHVLASLFLHQDMVFLHYQEKIIAQR---RNGKWLNAVYTPNPQDK 362
Query: 389 WVAEYRKWMD-KVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMH 447
V R+W + + G G+P+ G+S+ +P PA+
Sbjct: 363 MVITLRQWWENRAGGGIPWAEGYSS----DIP------------------PAE-----KD 395
Query: 448 APNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGR 496
L + + H HC C +K + + AA LA++ R
Sbjct: 396 KQKLFDVWTTHTQHCTVCQDALKNINRLTVLAYISAAVCLFLAVILDAR 444
>gi|308811733|ref|XP_003083174.1| slr1747 (ISS) [Ostreococcus tauri]
gi|116055053|emb|CAL57449.1| slr1747 (ISS), partial [Ostreococcus tauri]
Length = 405
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 168/370 (45%), Gaps = 66/370 (17%)
Query: 139 GRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACVRTYEVKESQGVVWVW--M 190
G LEC YHGW F GEGKC IPQ+ A K PR ACV Y E QG++WV+
Sbjct: 5 GELECGYHGWTFTGEGKCTSIPQIEPGAGLETALKSPR-ACVAAYPCVEKQGMLWVYPTA 63
Query: 191 SQKTPPNPDKLPWFENFARPG--FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWT 248
K P +LP P +QDV +LP D + LLEN+MD +H+P +H +
Sbjct: 64 KDKAPATLPELPLIPEIDDPDCVYQDV--FRDLPMDWATLLENVMDVSHVPFTHHNS--V 119
Query: 249 AKREDAQPLGFEVTER---TDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSK 303
KRE+A P+ E+T + GF G W G K + + F+AP ++++
Sbjct: 120 GKRENATPVNLELTSADGVSASGFQGMWQEGPRKGKYGSQYTEFKAPTLMRH-------- 171
Query: 304 TGEKHYFTGLFLCR--PTGQGKSMLIVRFGATKRSPLAK----LFPKWYFHQNASKVFEQ 357
T FT L + PT G+ L+ RF +S L + L+P+W+ H N + + E
Sbjct: 172 TLRTEAFTTLTVVYAVPTTPGRCRLLARFPFIFKSALPRFFFGLYPQWFSHTNQNSILED 231
Query: 358 DMGFLSSQNEVL-----MKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHST 412
D FL Q ++ +K + Y+ + +D +V+ +RKW+ ++ G P
Sbjct: 232 DQIFLHKQERLIEVDQKIKGKSYAQSCYMPTK-ADVYVSAFRKWITEIAGGGPAW----- 285
Query: 413 ISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAF 472
P G+ + + A L +RY+ H ++CK C++ +
Sbjct: 286 -------------PLGMPTNLPPQETTREA--------LLDRYYSHTVNCKSCATALANI 324
Query: 473 STWKNSLSVV 482
+ L V+
Sbjct: 325 GKVRKVLRVL 334
>gi|126654793|ref|ZP_01726327.1| hypothetical protein CY0110_10167 [Cyanothece sp. CCY0110]
gi|126623528|gb|EAZ94232.1| hypothetical protein CY0110_10167 [Cyanothece sp. CCY0110]
Length = 443
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 195/442 (44%), Gaps = 74/442 (16%)
Query: 74 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGNGELRCYQDRCPHRLAKLS 132
++++++ WYPL +D+ ++P +T+ ++V++K + + + D+CPHRLA LS
Sbjct: 2 ISEFNFFHHWYPLIPIEDIDSNSPTPVTLLGLRLVIWKPRSSTYYQVFLDQCPHRLAPLS 61
Query: 133 EGQLIDG--RLECLYHGWQFEGEGKCVKIPQLPADAKIPRS----ACVRTYEVKESQGVV 186
EG++ + L C YHGW+F+ G C IPQ + ++ ACV ++ ++ G++
Sbjct: 62 EGRIDENSDNLMCSYHGWEFDQNGICTSIPQTENTKILTKNKQQFACV-SFPSRQINGLL 120
Query: 187 WVW-------MSQKTP----PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDP 235
WVW ++ KTP P D A GF S + ++ YD L+EN+ DP
Sbjct: 121 WVWPDKNSQDLANKTPLPLSPQID--------ADKGFIWSSYVRDMAYDWQTLVENVADP 172
Query: 236 AHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQN 295
+H+P +H R + QP+ E+ + T + + L + + FE PC L+
Sbjct: 173 SHVPYAHHGVQ--GNRNNGQPIPIEIVKSTPNVIEAK----IERALNSTITFEPPCRLE- 225
Query: 296 NRELVDSKTGEKHYFTGLFL-CRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASK- 353
K G+ + GL + C P GKS L+ +F L K+ P+W+ H
Sbjct: 226 ----YAIKIGDSNKQVGLVVYCVPVAPGKSRLVGQFPRNFAKSLMKIIPRWWEHLTTRHL 281
Query: 354 VFEQDMGFLSSQNEVLM--KETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHS 411
V E DM L Q L +ET K Y +D V E+R+W D G
Sbjct: 282 VLEGDMILLQQQEYYLQEKQETQSWKTAYQLPTEADRLVIEFRRWFDTYCQG-------- 333
Query: 412 TISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKA 471
K+P V + H + +RY +H HC C + +
Sbjct: 334 -----KLPW----------EQVGINDTHLTINDNRH--EVLDRYHQHTQHCSSCRNAL-- 374
Query: 472 FSTWKNSLSVVAAALTVLAILA 493
N++ + L +LAI +
Sbjct: 375 -----NNVKKLQFILLILAIFS 391
>gi|75907279|ref|YP_321575.1| Rieske (2Fe-2S) protein [Anabaena variabilis ATCC 29413]
gi|75701004|gb|ABA20680.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 499
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 120/467 (25%), Positives = 197/467 (42%), Gaps = 75/467 (16%)
Query: 64 SAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDR 123
+A + ++ + WT++WYPL + + + P + + + IVL++DG+ + RC++D
Sbjct: 19 NATNEQSSKEENTFQWTKQWYPLAVVEFLDPSRPHAMQLLGKDIVLWRDGSSQWRCFEDF 78
Query: 124 CPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTY 177
CPHRLA LSEG++ DG L C YH W+F+ +G CV IPQ + ++ +C Y
Sbjct: 79 CPHRLAPLSEGRVEADGTLLCAYHAWRFDAQGNCVSIPQSKDEKTAAKNCESQKSCAVVY 138
Query: 178 EVKESQGVVWVWMS-------QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLE 230
+E QG++WVW + P +P E+ + + +LPY +E
Sbjct: 139 PTQERQGLLWVWAEAGEQAKVESQLQTPRIVPELEDNSGKVIKSPWNFRDLPYGWDYFME 198
Query: 231 NLMDPAHIPISH-----DRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFL 285
N+ DPAH+P+SH DR AK D P+ T GFA + + +
Sbjct: 199 NVSDPAHVPVSHHGIIGDRYK-DAKFYDMIPVR---PISTQDGFAFEIQPTQGKTVQGIH 254
Query: 286 RFEAPCVLQNNRELVDSKTGEKHYFTGLFL-------CRPTGQGKSMLIVRFGATKRSPL 338
F+ PC ++ +V + L+ CR G + V+ K+
Sbjct: 255 DFQPPCHMR----IVSTSEDGGQLILALYATPTRPGWCRHIG---CQVFVKNPQGKKPQG 307
Query: 339 AKLF----PKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNL----RSSDTWV 390
F P W H AS QDM FL Q +++ ++ +LN D V
Sbjct: 308 LSFFGLPLPVWLVHVLASLFLHQDMVFLHYQEKIIAQK---KNGKWLNAVYTPNPQDKMV 364
Query: 391 AEYRKWM-DKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAP 449
R+W+ ++ G G+P+ G+S+ +P PA+
Sbjct: 365 ITLRQWLKNRAGGGIPWAEGYSS----DIP------------------PAE-----KDKQ 397
Query: 450 NLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGR 496
L + + H HC C +K + + AA LA++ R
Sbjct: 398 KLFDVWTTHTQHCTVCQDALKNINRLTVLAYISAAICLFLAVILDAR 444
>gi|317970428|ref|ZP_07971818.1| cell death suppressor protein Lls1-like protein [Synechococcus sp.
CB0205]
Length = 432
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 180/443 (40%), Gaps = 50/443 (11%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-ELRCYQDRCPHRLAKLSEGQL- 136
W W+P+ +D+ + P T+ Q +VL+ D E R + D CPHRL LS+G+L
Sbjct: 6 WQNAWFPVAFLRDLDRNRPTPFTLVGQDLVLWFDRQADEWRAFADVCPHRLVPLSDGRLN 65
Query: 137 IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP 196
G LEC YHGW F+G G+C PQ + I + R+Y +QG+++V+
Sbjct: 66 AAGELECPYHGWSFDGSGRCTLQPQAEPGSSISGRSHCRSYATACAQGLLFVFSGPSEQA 125
Query: 197 NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
LP G+ T +LP D LLEN++D +H+P +H T +RE+A P
Sbjct: 126 REQPLPLVPVLDEAGWVVQDTFRDLPMDALTLLENVLDASHVPFTHHAT--VGRRENAAP 183
Query: 257 LGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLF 314
+ +T GF G W G + + RF AP ++ ++ + G T ++
Sbjct: 184 VALALTGFDRDGFTGLWEEGPRRGKLGSQHTRFLAPGLMWHDL----TAKGFARILTVVY 239
Query: 315 LCRPTGQGKSMLIVRFGATKRSP----LAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLM 370
PT G+ LI RF SP L +L P+W H V E D FL Q V+
Sbjct: 240 AV-PTRPGECRLIARFPFQFSSPWPGRLLRLRPQWLQHIGNHTVLEDDQLFLHWQERVIE 298
Query: 371 KETVPTKEL--YLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAG 428
+ L Y +D +V W+++ G G P+
Sbjct: 299 RRGGRHDTLRQYHLPTQADLYVRALHDWVNRYG-GEPF---------------------- 335
Query: 429 LVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTV 488
P + + L R+ H HC+ C+ + L + AL
Sbjct: 336 ---------PGQPLPQRQNRQALMERFEAHTRHCRSCAGADRRLKR-LQPLCWILVALAG 385
Query: 489 LAILASGRQWKAFCLASASLCLA 511
L SG W + + LA
Sbjct: 386 LGAAWSGPGWAGGIALAFGVALA 408
>gi|428297609|ref|YP_007135915.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
gi|428234153|gb|AFY99942.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
Length = 444
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 189/432 (43%), Gaps = 50/432 (11%)
Query: 76 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSEG 134
++++ ++WYPL +D+ D P+ + V +V++K + E + + D CPHRLA LSEG
Sbjct: 4 NFNFFQQWYPLSPVEDLEKDRPIPVKVLGINLVIWKPLSSETFQVFLDECPHRLAPLSEG 63
Query: 135 QLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWVW 189
++ D G L C YHGWQF+ +G C IPQ I ++ CV ++ V+E Q ++WVW
Sbjct: 64 RIDDQTGNLMCSYHGWQFDSQGSCTHIPQAEKAEIIAKNQDNFCVTSFPVREEQDLLWVW 123
Query: 190 MSQKTP--PNPDKLPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 246
+ + KLP A GF S + +L YD L+EN+ DP+H+P +H
Sbjct: 124 LDLNSVDIAATTKLPLSPLVDASKGFVWSSFVRDLEYDWQTLVENVADPSHVPFAHHGVQ 183
Query: 247 WTAKREDAQPLGFEVTE-RTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
R+ A+P+ +V + + D G + +P + FE PC L E G
Sbjct: 184 --GNRDKAKPILMQVKDSQADIIEVETVG---NFSVPTKITFEPPCRL----EYAIQFGG 234
Query: 306 EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH-QNASKVFEQDM--GFL 362
E + C P GKS L+ +F KL P+W+ H N + V + DM
Sbjct: 235 EDKQMGLVTYCIPISPGKSRLVAQFPRNFAKRAHKLTPRWWDHINNRNLVIDGDMILLRQ 294
Query: 363 SSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDK-VGHGMPYHFGHSTISLPKVPAV 421
Q + T K Y +D V EYR W D+ G +P+
Sbjct: 295 QEQLLQQHQRTESWKTAYKLPTGADRLVIEYRNWFDRYCGGKLPWE-------------- 340
Query: 422 VEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAF-STWKNSLS 480
G++ P T +RY +H HC C +K + K L
Sbjct: 341 --------KVGLNGEIPQT----TQSRQETLDRYTQHTQHCSSCRGALKNIQNIQKFLLG 388
Query: 481 VVAAALTVLAIL 492
++ V+ +L
Sbjct: 389 YFTISVAVVGLL 400
>gi|427724861|ref|YP_007072138.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
gi|427356581|gb|AFY39304.1| Pheophorbide a oxygenase [Leptolyngbya sp. PCC 7376]
Length = 451
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 195/439 (44%), Gaps = 57/439 (12%)
Query: 71 ERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLY-KDGNGELRCYQDRCPHRLA 129
E +DW E WYP++ +D+ P + ++ +V++ + + + + D CPHRLA
Sbjct: 11 EVSTEKFDWLEAWYPVHFVQDLSKTEPTRFVLLEKPLVIWWHEESQQWNVFSDVCPHRLA 70
Query: 130 KLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGVVW 187
LSEG+++DG LEC YHGWQF G C KIP D + A V +Y + QG+++
Sbjct: 71 PLSEGRIVDGCLECPYHGWQFSESGSCEKIPFQKEDGTANENSRATVASYPCRVEQGLLF 130
Query: 188 VWMSQ----KTPPNPDKLPWFENFARPG-FQDVSTIHELPYDHSILLENLMDPAHIPISH 242
V+ + +T P P +P + + PG + ++PYD + LLEN++D +H+ +H
Sbjct: 131 VYPGKLENAETQPLP-TIPALDQY--PGEWVMADVFRDIPYDATTLLENVLDTSHVAFTH 187
Query: 243 DRTDWTAKREDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELV 300
R++A+ +V++ GF G W G + + F AP + ++ E
Sbjct: 188 HPR--VGNRKNAKEFILDVSDIEKTGFTGIWEEGPRRGKLGAQKTTFFAPSAMWHDIE-- 243
Query: 301 DSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFE 356
+S G+ T ++ PT +GK +VR +S + +L P+W+ H + + E
Sbjct: 244 ESSFGQ--VMTCVYAV-PTEKGKCRALVRLPFRFKSAIPRLVFKYTPRWFSHVSQMGILE 300
Query: 357 QDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLP 416
D FL Q L K + SD +V YRKW++ G F T
Sbjct: 301 DDQIFLHLQERELEKSKKNYAQTCYLPTGSDLFVLAYRKWVENFGEP----FADQTF--- 353
Query: 417 KVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWK 476
APA P++ L RY H +C C + + +
Sbjct: 354 --------APA---------EPSQA--------QLLERYHSHTKNCSSCKAALANIQKIR 388
Query: 477 NSLSVVAAALTVLAILASG 495
L+ +A L L + SG
Sbjct: 389 TGLA-IAGFLGWLTLPFSG 406
>gi|115456061|ref|NP_001051631.1| Os03g0805700 [Oryza sativa Japonica Group]
gi|108711641|gb|ABF99436.1| Rieske domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113550102|dbj|BAF13545.1| Os03g0805700 [Oryza sativa Japonica Group]
gi|125546115|gb|EAY92254.1| hypothetical protein OsI_13974 [Oryza sativa Indica Group]
Length = 543
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/469 (27%), Positives = 192/469 (40%), Gaps = 78/469 (16%)
Query: 61 GPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCY 120
PA+ EER +DW ++WYP+ D+ P G V ++V + DG GE R
Sbjct: 74 APAAGEER--------FDWLDQWYPVAPVCDLDPRKPHGKMVLGLRVVAWFDGGGEWRVV 125
Query: 121 QDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSACVRT 176
D CPHRLA LSEG++ GRL+C YHGW F+G G C IPQ PA ACV +
Sbjct: 126 DDACPHRLAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIPQAPALGPPVHKNSKACVAS 185
Query: 177 YEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSILLEN 231
Y ++W + + P D L P+F + P F V + + PY +
Sbjct: 186 YPSVVQNNILWFY-PRTEPEYRDVLQRKRPPYFPDLDDPSFNTVFGVRDFPYGYRNAQAI 244
Query: 232 LMDPAHIPIS--------------HDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEK 277
L+ HI + H + +E P+ ++ E GF G+
Sbjct: 245 LLRNGHIGMQLDILCRGSIAMQNIHLLSTVEFDQERGGPVKMKIEEANIDGFLSIQGENW 304
Query: 278 DEPLPNFLRFEAPCVLQNNREL-------VDSKTGEKHYFTGL-FLCRPTGQGKSMLIVR 329
RF APC + N EL D + ++ L FLC P G+S +I
Sbjct: 305 GH-----FRFIAPCTI-NRSELPLETLAHFDQEKQQQQPQGMLVFLCIPVAPGRSRVIWV 358
Query: 330 FGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVP--TKELYLNLRSSD 387
F + + K P+W H + V + D+ L + V K Y+ SD
Sbjct: 359 FPQSVSAWPDKFIPRWLHHMVTNTVLDSDLYLLHIEERNFAAVGVDKWQKACYVPTL-SD 417
Query: 388 TWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMH 447
+ +R W K + G +T + ++P ++P K
Sbjct: 418 NMIITFRNWFRKYCK---HQVGWATPMVNQLP----------------TTPTKD------ 452
Query: 448 APNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGR 496
L RY+ HV+ C CS+ +K + +L V A++ V+ LA+G+
Sbjct: 453 --QLMERYWSHVMQCTSCSAALKWMRAMEVALQV--ASVAVVGFLAAGK 497
>gi|443321338|ref|ZP_21050394.1| Rieske (2Fe-2S) domain-containing protein [Gloeocapsa sp. PCC
73106]
gi|442788956|gb|ELR98633.1| Rieske (2Fe-2S) domain-containing protein [Gloeocapsa sp. PCC
73106]
Length = 490
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/457 (25%), Positives = 196/457 (42%), Gaps = 68/457 (14%)
Query: 71 ERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAK 130
+ + + W ++WYP+ + + + P + + + +VL++ G+ C +D CPHR A
Sbjct: 10 QTKAESFQWHQQWYPVAVVQYLDPTKPNKIKLLGKNLVLWQKQKGQWSCLEDFCPHRGAP 69
Query: 131 LSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKI-------PRSACVRTYEVKES 182
LSEG++ DG L C YHGW+F EG+CVKIPQ D I P+++CV Y ++ +
Sbjct: 70 LSEGRVESDGTLMCAYHGWRFNDEGQCVKIPQC-KDQHIEIKHCQNPKASCV-AYPLQIA 127
Query: 183 QGVVWVWMS-------QKTPPNPDKLPWFENFARPGFQDVS--TIHELPYDHSILLENLM 233
QG++W+W + P P E A+ V+ +I +LPY EN+
Sbjct: 128 QGLIWIWSEPGAQAEIESKLREPRLTP--ELAAKSSDMVVAPWSIRDLPYGWDFFFENVC 185
Query: 234 DPAHIPISHDRTDWTAKREDAQPLGFEVTER--TDRGFAGRWGKEKDEPLPNFLRFEAPC 291
DPAH P+SH + +DA T + T GFA + + DEP+P F+ PC
Sbjct: 186 DPAHAPVSH-HGFLGNRYQDANYYDMIPTRKLSTQDGFAFQLVSDLDEPIPVSHDFQPPC 244
Query: 292 VLQNNRELVDSKTGEKHYFTGLFLCRPTGQG-----KSMLIVRFGATKRSPLAKLF---- 342
+++ +DS + + PT G ++++ + S +F
Sbjct: 245 LMK-----IDSLLPNGNKIIFILYAIPTQPGWCRHIACQILIKHNKSPFSKGLSIFALNI 299
Query: 343 PKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKWMDKV 400
P W H +S QD+ FL Q + L K + +++YL D V +R+W+
Sbjct: 300 PAWMNHLMSSFFLHQDLVFLHYQEKELAKRGMEQWLEQVYLP-NPQDKMVIAFRQWLKYR 358
Query: 401 GHG-MPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHV 459
G +P+ F + LP + L + + H
Sbjct: 359 AEGNIPWQFPSDSQYLPT--------------------------AEENKQKLFDVWTTHT 392
Query: 460 IHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGR 496
HC C ++ + KN L + +LA+ R
Sbjct: 393 QHCYVCQRALRRINYAKNLLKIGGVVCLILALFIDNR 429
>gi|255585387|ref|XP_002533389.1| pheophorbide A oxygenase, putative [Ricinus communis]
gi|223526763|gb|EEF28989.1| pheophorbide A oxygenase, putative [Ricinus communis]
Length = 509
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 178/465 (38%), Gaps = 82/465 (17%)
Query: 29 IISLNKTPKSRKCHAVTDRSSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYL 88
I S+NK K ++T+ G + + Q +DW WYP+
Sbjct: 36 IQSINKNTSRSKLLNTLSSTATAAAGTISTESTNPNDPIFESDNQGEKFDWFSHWYPIMP 95
Query: 89 TKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLAKLSEGQLID-GRLECLYH 146
D+ P V +V++ D N + + D CPHRLA LSEG++ GRL+C+YH
Sbjct: 96 VCDLDKRVPHAKRVMGLDVVVWWDRNENSWKVFDDACPHRLAPLSEGRIDQWGRLQCVYH 155
Query: 147 GWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKESQGVVWVWMSQ----KTPPNPD 199
GW F G C IPQ P D + ACV Y +VW W + K + +
Sbjct: 156 GWCFNSSGDCKFIPQAPQDGPPVHTFKKACVAAYPSTVQNDIVWFWPNTNPEYKDILSKE 215
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHS---ILLENLMDPAHIPISHDRTDWTAKREDAQP 256
K P+F P + + E P+ ++ +L N +D RE P
Sbjct: 216 KPPYFSELDDPSYTKSMSCREFPFGYAKYDLLFLNSLD----------------REGGSP 259
Query: 257 LGFEVTERTDRGFAG-RWGKEKDEPLPNFLRFEAPCVLQNNREL-VDSKTGEKHYFTGLF 314
+ + + GF R+G + +F +PC + L +K G LF
Sbjct: 260 INLNIEKLDKNGFVSTRFGGDS--------KFLSPCTYYSAFGLPAPAKAGNADEGVLLF 311
Query: 315 LCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKET- 373
LC P G GKS LI F + ++ P+W H + V + D+ L + +M
Sbjct: 312 LCVPVGPGKSRLIYAFPRNFGVWIGRIMPRWVSHLVENLVLDSDLYLLHLEERKIMDIGP 371
Query: 374 --------VPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHA 425
VPTK SD V +RKW+ K G G +LP
Sbjct: 372 SNWQKACFVPTK--------SDAQVVAFRKWLKKYSDGQINWGGKFNGALPP-------- 415
Query: 426 PAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIK 470
SP K L +RY+ HV++C CS K
Sbjct: 416 -----------SPPKD--------QLMDRYWSHVVNCSSCSLAYK 441
>gi|427728395|ref|YP_007074632.1| Rieske (2Fe-2S) domain-containing protein [Nostoc sp. PCC 7524]
gi|427364314|gb|AFY47035.1| Rieske (2Fe-2S) domain-containing protein [Nostoc sp. PCC 7524]
Length = 495
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 172/381 (45%), Gaps = 46/381 (12%)
Query: 64 SAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDR 123
S ++ + + + + WT++WYP+ + + + P G+ + Q IVL++DG G+ RC++D
Sbjct: 14 SLKDEQLQTEAEIFSWTKQWYPVAVVEFLDPARPHGMQLLGQDIVLWRDGTGKWRCFEDF 73
Query: 124 CPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPAD------AKIPRSACVRT 176
CPHRLA LSEG++ DG L C YH W+F+ +GKCV IPQ + + P+S C
Sbjct: 74 CPHRLAPLSEGRVESDGTLLCAYHAWRFDAQGKCVSIPQSQDEQTAAHHCENPKS-CAVV 132
Query: 177 YEVKESQGVVWVWMS-------QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILL 229
Y +E QG++WVW + P + E+ + + +LPY +
Sbjct: 133 YPTQECQGLLWVWAESGEQAQIESQLRTPRLIAELEDSSGKVEKSPWNFRDLPYGWDYFM 192
Query: 230 ENLMDPAHIPISH-----DRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNF 284
EN+ DPAH+P+SH DR AK D P+ T+ GFA
Sbjct: 193 ENVADPAHVPVSHHGIVGDRYK-DAKYYDMIPVR---KMSTEEGFAFALQPTTGNIEQAV 248
Query: 285 LRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQG-----KSMLIVRFGATKRSPLA 339
F+ PC ++ + + T + PT G + V+ K+
Sbjct: 249 HDFQPPCYMR-----IATTTKDGGQLILALYATPTRPGWCRHIGCQVFVKNSQGKKPQGL 303
Query: 340 KLF----PKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNL----RSSDTWVA 391
F P W H AS QDM FL Q + + + K +L+ D V
Sbjct: 304 SFFGLPLPTWLIHVLASLFLHQDMVFLHYQEKTIAQR---RKGKWLDAVFTPNPQDKMVI 360
Query: 392 EYRKWMDK-VGHGMPYHFGHS 411
R+W++K G G+P+ G+S
Sbjct: 361 TLRQWLEKRAGGGIPWAEGYS 381
>gi|254430676|ref|ZP_05044379.1| pheophorbide A oxygenase [Cyanobium sp. PCC 7001]
gi|197625129|gb|EDY37688.1| pheophorbide A oxygenase [Cyanobium sp. PCC 7001]
Length = 464
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 150/343 (43%), Gaps = 24/343 (6%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRLAKLSEGQLI 137
W +WY + D+ P T+ +Q +VL+ D + R ++D CPHRL LSEG+L
Sbjct: 3 WNNQWYAVAYLDDLDRRRPTPFTLLEQDLVLWWDAAADTWRAFEDVCPHRLVPLSEGRLN 62
Query: 138 D-GRLECLYHGWQFEGEGKCVKIPQLPADAKI-----PRSACVRTYEVKESQGVVWVWMS 191
G LEC YHGW F+G G+C IPQ D RS C QG+++V+
Sbjct: 63 GRGELECPYHGWSFDGSGRCTAIPQADPDQAAVACSSARSRCT-ALPTATGQGLLFVFAG 121
Query: 192 QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKR 251
+ LP P + T +LP D LLEN++D +H+P +H RT +R
Sbjct: 122 EPERAPDVPLPLVPVLEEPDWLVQDTFRDLPMDALTLLENVLDVSHVPFTHHRT--VGRR 179
Query: 252 EDAQPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHY 309
E+A P+ +T GF W G + F F APC++ ++ + G
Sbjct: 180 ENAAPVEATITAEGPDGFTAEWLEGPRRGRLGSQFTTFAAPCLMWHDL----TAKGFARI 235
Query: 310 FTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGFLSSQ 365
T ++ P G+ L RF RS L +L P+W H V E D FL Q
Sbjct: 236 LTVVY-ATPIRPGECRLFARFPFQFRSVLPRLLLRFRPRWLQHLANHTVLEDDQVFLHWQ 294
Query: 366 NEVLMKE--TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPY 406
L + + + SD +V W+D G G P+
Sbjct: 295 ERALARRGGSAAFSQACFLPTGSDVYVKALHAWVDSHG-GEPF 336
>gi|30103015|gb|AAP21428.1| putative cell death suppressor protein [Oryza sativa Japonica
Group]
Length = 511
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 174/423 (41%), Gaps = 68/423 (16%)
Query: 102 VFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIP 160
V +V + DG GE R D CPHRLA LSEG++ GRL+C YHGW F+G G C IP
Sbjct: 2 VMGLSVVAWLDGGGEWRVVDDACPHRLAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIP 61
Query: 161 QLPA---DAKIPRSACVRTYEVKESQGVVWVW----------MSQKTPPNPDKLPWFENF 207
Q PA ACV +Y ++W + + +K PP ++ +
Sbjct: 62 QAPALGPPVHKNSKACVASYPSVVQNNILWFYPRSEPEYCDVLKRKRPPYVPEI----DD 117
Query: 208 ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDR 267
P V + +L Y + +L+ENLMDPAH+P +H E P+ + E +
Sbjct: 118 DDPSHFMVYGVRDLLYGYELLVENLMDPAHVPYAHKGLFVEFDLEHGSPMKMRIEEASID 177
Query: 268 GF----AGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTG-------LFLC 316
GF G WG + +F APC L D + E +
Sbjct: 178 GFHSNLDGDWG---------YFKFVAPCTLYGTPFRTDLEADEVKKKKKKKPEVRVVLFT 228
Query: 317 RPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT 376
P G+S I L K+ P+W++H ++ + + D +L ++ + +
Sbjct: 229 VPVAPGRSRFIWASRYKVGGWLDKILPRWFYHMTSNTILDSDT-YLHVEDRNITTVGLDN 287
Query: 377 --KELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVS 434
K Y+ SSD V YR W K + H P V + P
Sbjct: 288 WHKACYVPT-SSDNLVIAYRNWFRK-------YCNHQIGWANPNPTVKQQLP-------- 331
Query: 435 ASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILAS 494
+P + L RY+ HV+ C C + +K + +L V AA+ V+ LA+
Sbjct: 332 -QTPTRD--------QLLERYWSHVMQCTSCRAALKGMRALEITLQV--AAVAVVGFLAA 380
Query: 495 GRQ 497
G++
Sbjct: 381 GKE 383
>gi|428184362|gb|EKX53217.1| hypothetical protein GUITHDRAFT_53010, partial [Guillardia theta
CCMP2712]
Length = 406
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 167/374 (44%), Gaps = 64/374 (17%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVL-YKDGNGELRCYQDRCPHRLAKLSEGQL----- 136
WYPL K V + P +++ +VL Y++ + R DRCPHRL +LSEG++
Sbjct: 1 WYPLGFEKFVNKEKPCQVSILGTSVVLWYENTSSSWRAALDRCPHRLVRLSEGRIDPVSG 60
Query: 137 ----------IDGRLECLYHGWQFEG----EGKCVKIPQLPADAKIPRSAC-VRTYEVKE 181
I G +EC YHGW+F +G C IPQ +AK+ R+ + T V+
Sbjct: 61 NIKSTWDSSHITGNIECPYHGWKFRAHDAVKGSCTCIPQSKDEAKLERAPSRLITLPVQC 120
Query: 182 SQGVVWVW----MSQKTPPNPDKLP--WFENFARPGFQDVSTIHELPYDHSILLENLMDP 235
G++W W M + P+P KL + PG V +LP D +IL+EN++DP
Sbjct: 121 RDGMIWCWTARLMGSEAEPDPSKLSAMLLDRIGAPGIMHVDYFRDLPMDATILMENVLDP 180
Query: 236 AHIPISHDRTDWTAKREDAQPLGFEVTERTD-RGFAGRWGKEKDEPLPN-----FLRFEA 289
+H+P +H RT ++RE A PL + + GF+ K + L + F A
Sbjct: 181 SHLPFTHHRT--ISRRERASPLTLAMKQTVSPSGFSA--TKTAGDTLNTSKTGGSVEFIA 236
Query: 290 PCVLQNNRELVDSKTGEKHYFT--GLFLCRPTGQGKSMLIVRF---GATKRSPLAKLF-- 342
P V S T K F+ + P G S + VR A PL+ +F
Sbjct: 237 P-------NTVISATNRKQSFSDWNVVYAVPQSPGLSRIYVRIVFETAKMPLPLSLIFKF 289
Query: 343 ----PKWYFHQNASKVFEQDMGFLSSQNEVLMKE---------TVPTKELYLNLRSSDTW 389
P + H N K+ E D FL Q ++L E + K + SDT
Sbjct: 290 AFSLPSFLLHLNNHKILEDDNVFLHFQGKLLQGEARFRRGNLLSPDWKTRFFLPTKSDTL 349
Query: 390 VAEYRKWMDKVGHG 403
V+ +R+W+DK G
Sbjct: 350 VSAFRQWLDKYTGG 363
>gi|218245636|ref|YP_002371007.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8801]
gi|218166114|gb|ACK64851.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8801]
Length = 497
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/470 (26%), Positives = 200/470 (42%), Gaps = 68/470 (14%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
A + WT++WYP+ + + + P + + +++VL++D N + RC++DRCPHRL LSEG
Sbjct: 22 ATFQWTKQWYPIAVIEFLDPSRPHPVQLLGKELVLWRDRNNQWRCFEDRCPHRLVPLSEG 81
Query: 135 QL-IDGRLECLYHGWQFEGEGKCVKIPQLP------ADAKIPRSACVRTYEVKESQGVVW 187
++ DG L C YH W+F+ GKCV IPQ PRS C Y +E QG++W
Sbjct: 82 RVEADGTLLCAYHAWRFDETGKCVSIPQSKDKDTENQHLNNPRS-CAIAYPTQEQQGLLW 140
Query: 188 VW-------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPI 240
VW + P +P E + + + ++P+ +EN+ DPAH+P+
Sbjct: 141 VWPESGDQAEQESQSRKPRLIPELEEKSDKVVKLFWYVRDMPFGWDYFMENVCDPAHVPV 200
Query: 241 SHDRTDWTAKREDAQPLGFEVTER---TDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNR 297
SH ++ +DA+ + ER T GFA F+ PC+++ +
Sbjct: 201 SHHGM-MGSRYKDAKYYNM-IREREISTQNGFAFSLEPVAPTIEKAVHDFQPPCLMKISS 258
Query: 298 ELVDSKTGEKHYFTGLFL-------CRPTGQGKSMLIVRFGATKRSPLAKLF----PKWY 346
D G K + L++ CR G ++V+ K F P W
Sbjct: 259 SFKD---GAK-FILALYVSPTRPGWCRHIG---CQILVKSNEGKTPKGLAFFALPMPTWL 311
Query: 347 FHQNASKVFEQDMGFLSSQNEVLMKE-TVPTKELYLNLRSSDTWVAEYRKWMDK-VGHGM 404
H AS QD+ FL Q +++ ++ T D V RKW++K G G+
Sbjct: 312 GHILASSFLHQDLVFLHYQEKIIARQGTQNWLSAVYTPNPQDKMVITLRKWLEKRAGGGI 371
Query: 405 PYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKG 464
P+ G + P++P P + L + + H HC+
Sbjct: 372 PWAEGTN----PELPP-----------------PQRD------KQQLFDVWSTHTQHCRV 404
Query: 465 CSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVY 514
C +K + + + A + A++ R A L S SL G +
Sbjct: 405 CQDALKNINRTRLFAYIGAGVCLLFAVILDARM-VAMTLGSQSLKEVGSW 453
>gi|428771559|ref|YP_007163349.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
gi|428685838|gb|AFZ55305.1| Pheophorbide a oxygenase [Cyanobacterium aponinum PCC 10605]
Length = 444
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 192/434 (44%), Gaps = 53/434 (12%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGNGELRCYQDRCPHRLAKLSE 133
+++++ + WYP++ +D+ + P T+ Q++V++K + + + + D CPHRLA LSE
Sbjct: 3 SEFNFFQNWYPIFPLEDLEINKPQSFTLLGQRLVIWKGEKQKKFQVFLDLCPHRLAPLSE 62
Query: 134 GQLID--GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA---CVRTYEVKESQGVVWV 188
G++ + G L C YHGWQF +G C IPQ + ++ V+ + +E ++WV
Sbjct: 63 GRIDEETGNLMCSYHGWQFNEKGICTCIPQAENQELVVKNQHNFAVKVFPTREENDLLWV 122
Query: 189 WMSQKTPPNPDK--LPWFENFARP-GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
W TP +K LP + GF S + +L YD +EN+ DP+H+P +H
Sbjct: 123 WADANTPDLAEKKPLPLSPQIDKERGFVWSSMVRDLEYDWQTFIENVADPSHVPFAHHGL 182
Query: 246 DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
R+ AQP+ E+ + + + + + FE P L+ G
Sbjct: 183 Q--GNRKQAQPIAIEIVKSSVNLIEAKVSR----LFTTTITFEPPSRLE-----YAIGFG 231
Query: 306 EKHYFTGLF-LCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH-QNASKVFEQDMGFLS 363
+K GL C P GK ++ +F L K+ P+W+ H + + V + DM L
Sbjct: 232 DKGQQLGLITYCIPIEPGKCRIVAQFARNFAYSLHKITPRWWEHIKTRNAVLDGDMILLH 291
Query: 364 SQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKWMDKVGHG-MPYH-FGHSTISLPKVP 419
Q L ++ K Y +D V E+R+W D G +P+ G S K+
Sbjct: 292 QQERFLQQKLAGENWKNSYKMPTKADRLVIEFRRWFDIYCEGKLPWEKVGFSNFENLKI- 350
Query: 420 AVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKA-FSTWKNS 478
+ + + +RY +H +CK C + +K + S
Sbjct: 351 -------------------------SDNRQQILDRYSQHTKYCKSCRNALKTNYILQIVS 385
Query: 479 LSVVAAALTVLAIL 492
+ +L++ AIL
Sbjct: 386 IIYFILSLSITAIL 399
>gi|443325070|ref|ZP_21053783.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
gi|442795326|gb|ELS04700.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
Length = 497
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 161/357 (45%), Gaps = 34/357 (9%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+ WT++WYP+ + + + P L + + +VL++D +G+ C++D CPHRLA LSEG++
Sbjct: 26 FQWTKQWYPVAVAEFLDSSRPHALQLLGKDLVLWQDNSGQWHCFEDFCPHRLAPLSEGRI 85
Query: 137 -IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVWM 190
DG L C YH W+F+ +G CV IPQ R+ +C Y ++ Q ++WVW
Sbjct: 86 ESDGTLLCAYHAWRFDSQGNCVNIPQSKDRETEARNCANQKSCAIVYPTQQLQDLIWVWP 145
Query: 191 S-------QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
+ P +P ++ + + I +LPY +EN+ DPAH+P+SH
Sbjct: 146 ESGAVAEVESQARKPRTVPELDDPSSRVVKPFWNIRDLPYGWDFFMENVADPAHVPVSHH 205
Query: 244 RTDWTAKREDAQPLGFEVTE--RTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVD 301
++ EDA+ T GFA + F+ PC + R
Sbjct: 206 GI-MGSRYEDAKYYDMPRVRAISTQEGFAFGITPTASNVVQAVHDFQPPCQM---RVTTS 261
Query: 302 SKTGEKHYFTGLFL------CRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYFHQNA 351
K G K + CR G+ ++++ A K P F PKW H A
Sbjct: 262 FKDGGKLILALYAIPTRPGWCRHIGR---QILIKNDAGKTPPGLGFFALPMPKWLNHILA 318
Query: 352 SKVFEQDMGFLSSQNEVLMKETVPT-KELYLNLRSSDTWVAEYRKWMDK-VGHGMPY 406
S QD+ FL Q +++ K E D V +R+W+ K G+G+P+
Sbjct: 319 SLFLHQDLIFLHYQEKIVAKRGANKWLETVYTPNPQDKAVIAFRQWLAKRAGNGVPW 375
>gi|428307436|ref|YP_007144261.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
gi|428248971|gb|AFZ14751.1| Pheophorbide a oxygenase [Crinalium epipsammum PCC 9333]
Length = 498
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 177/385 (45%), Gaps = 56/385 (14%)
Query: 62 PASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQ 121
P + E+ + E Q + WT++WYP+ + + + P + + + +VL++DG RC++
Sbjct: 12 PDTVEQWQQEPQT--FQWTKQWYPVAVVEFLEPSRPHAIELLGKNLVLWRDGTETWRCFE 69
Query: 122 DRCPHRLAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQL---PADAKIPRS--ACVR 175
D CPHRL LSEG++ DG L C YH W+F+ G CV IPQ +AK S AC
Sbjct: 70 DYCPHRLVPLSEGRVEPDGTLLCAYHAWRFDSNGNCVSIPQSKDKETEAKNCSSPKACAI 129
Query: 176 TYEVKESQGVVWVWMSQKTPP-------NPDKLPWFENFARPGFQDVSTIHELPYDHSIL 228
Y +E QG++WVW T +P +P E + + +I +LPY
Sbjct: 130 AYPTQERQGLLWVWAESGTQAQLESQLNSPCLIPELEENSDRVVKMAWSIRDLPYGWDFF 189
Query: 229 LENLMDPAHIPISH-----DRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPN 283
+EN+ DPAH+P+SH +R AK D P+ T GF+ + P+P
Sbjct: 190 MENVADPAHVPVSHHGIVGNRYQ-DAKYYDMIPIR---KMSTQSGFSF-----EIVPVPG 240
Query: 284 FL-----RFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQG-----KSMLIVRFGAT 333
L F+ PC ++ +V + T L+ PT G ++V+ A
Sbjct: 241 NLVQAVHDFQPPCQMR----IVSTATDGGQLILALYAI-PTRPGWCRNISCQVLVKNEAG 295
Query: 334 KRSPLAKLF----PKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNL----RS 385
K F P W H S QD+ FL Q +++ + ++ +LN
Sbjct: 296 KSPSGLAFFALPMPTWLGHVLGSLFLHQDLVFLHYQEKIISQR---SQGKWLNAVYTPNP 352
Query: 386 SDTWVAEYRKWMD-KVGHGMPYHFG 409
D V +R+W++ K G G+P+ G
Sbjct: 353 QDKMVIAFRQWLEQKAGGGIPWANG 377
>gi|359478793|ref|XP_002283586.2| PREDICTED: LOW QUALITY PROTEIN: protochlorophyllide-dependent
translocon component 52, chloroplastic-like [Vitis
vinifera]
Length = 473
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 189/483 (39%), Gaps = 92/483 (19%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLAKLSEGQ 135
+DW +WYP+ D+ P V +V++ D N E + + D C HRLA LSEG+
Sbjct: 14 FDWLSQWYPVAPVCDLDKRKPHSKRVIGLDVVVWWDRNESEWKVFDDACAHRLAPLSEGR 73
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKESQGVVWVWMS 191
+ GRL+C+YHGW F G G C IPQ P D + A Y G+VW W
Sbjct: 74 IDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKARAAVYPSAVQHGIVWFW-- 131
Query: 192 QKTPPNPDKLPWFEN-FAR------PGFQDVSTI-----HELPYDHSILLENLMDPAHIP 239
PN D P F++ F + P D+S + P+ + IL+EN+MDPAH+
Sbjct: 132 ----PNTD--PQFKDIFTKKRPPYIPELDDLSYTKSMGARDFPFGYEILMENVMDPAHVA 185
Query: 240 ISH-------DRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCV 292
+H D A RE P+ V GF + + +P L + C+
Sbjct: 186 YAHYGIVQIPQAKDRXADREGGTPIEISVKRSAIDGFDAERELARSKFIPPCLYYT--CL 243
Query: 293 ----LQNNRELVDSKTGEK-------HYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKL 341
Q+N + T E+ + +C P G S LI F +
Sbjct: 244 DFPAYQSNESVSSGLTKEEPSSHMSPKRALLILICVPVSPGNSRLIWTFPRNFGLWTDHI 303
Query: 342 FPKWYFHQNASKVFEQDMGFLSSQNEVLMKET---------VPTKELYLNLRSSDTWVAE 392
P+W H + + + + D+ L + +MK VPTK SD +
Sbjct: 304 IPRWMLHMSQNLILDSDLYLLHLEERKIMKAGPSNWHKACFVPTK--------SDAHIVA 355
Query: 393 YRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLA 452
+R W+ K G + + +LP P L
Sbjct: 356 FRAWLRKYSGGQLDWGTNFSSALPPTPP---------------------------KEQLM 388
Query: 453 NRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASAS---LC 509
+RY+ HV++C CS K + L + + AL + ++ G A + + S LC
Sbjct: 389 DRYWSHVVNCSSCSVAYKGLQVLEVVLQIFSIALIGIPVINHGVMSVAARITAVSMAILC 448
Query: 510 LAG 512
A
Sbjct: 449 FAA 451
>gi|159480512|ref|XP_001698326.1| pheophorbide A oxygenase [Chlamydomonas reinhardtii]
gi|158282066|gb|EDP07819.1| pheophorbide A oxygenase [Chlamydomonas reinhardtii]
Length = 365
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 156/337 (46%), Gaps = 28/337 (8%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSEGQLI 137
W + WYP+ TKD+ P +T+ +V++ D N R ++D CPHRL LSEG++
Sbjct: 2 WFDSWYPVAFTKDLDPAKPHRVTLLGIPMVVWWDKNAAAWRVFEDVCPHRLVPLSEGRIT 61
Query: 138 -DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP 196
G LEC YHGW F G+GKC IPQ+ AC Y QG+++V
Sbjct: 62 PSGLLECGYHGWAFSGDGKCEVIPQVSQGKCDTPRACATGYHCAVRQGLLFVGAGSGGGA 121
Query: 197 NPDKLPWFENFARPGFQDVS--TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDA 254
++P PG + +S +LPYD S L+EN++D +H+P +H +
Sbjct: 122 EEARIPLVSELEEPGGKWLSQDVWRDLPYDWSTLMENVLDSSHVPFTHH----ASMSNRN 177
Query: 255 QPLGFEVTER-TDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFT 311
P ++T TD GF+G W G + P F APC L++ +DSK F
Sbjct: 178 GPYDLKLTSAITDAGFSGMWTTGPRAGKLGPQSTTFTAPCFLKHR---LDSKG-----FA 229
Query: 312 GLFLCR--PTGQGKSMLI----VRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
L + P G+ LI +RF + L P W++H ++ + E D FL
Sbjct: 230 SLTVVYAVPMEPGRCRLINRNVLRFNNAIPEAIFGLVPSWWWHVSSHVLLEDDQIFLHLG 289
Query: 366 NEVLMKE---TVPTKELYLNLRSSDTWVAEYRKWMDK 399
E + + ++ +DT+V +++W+ +
Sbjct: 290 EEETARRRAGGLGHSQVCYMPSQADTYVIAFQRWLSR 326
>gi|297746464|emb|CBI16520.3| unnamed protein product [Vitis vinifera]
Length = 571
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 195/493 (39%), Gaps = 90/493 (18%)
Query: 62 PASAEERRGERQVADYDWTE--EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELR 118
P SA R E Q+ + TE EWYP+ D+ P V +V++ D N E +
Sbjct: 105 PPSAFPFRQESQMDERVLTEIEEWYPVAPVCDLDKRKPHSKRVIGLDVVVWWDRNESEWK 164
Query: 119 CYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACV 174
+ D C HRLA LSEG++ GRL+C+YHGW F G G C IPQ P D + A
Sbjct: 165 VFDDACAHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKARA 224
Query: 175 RTYEVKESQGVVWVWMSQKTPPNPDKLPWFEN-FAR------PGFQDVSTI-----HELP 222
Y G+VW W PN D P F++ F + P D+S + P
Sbjct: 225 AVYPSAVQHGIVWFW------PNTD--PQFKDIFTKKRPPYIPELDDLSYTKSMGARDFP 276
Query: 223 YDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLP 282
+ + IL+EN+MDPAH+ +H A RE P+ V GF + + +P
Sbjct: 277 FGYEILMENVMDPAHVAYAHYG---IADREGGTPIEISVKRSAIDGFDAERELARSKFIP 333
Query: 283 NFLRFEAPCV----LQNNRELVDSKTGEK-------HYFTGLFLCRPTGQGKSMLIVRFG 331
L + C+ Q+N + T E+ + +C P G S LI F
Sbjct: 334 PCLYYT--CLDFPAYQSNESVSSGLTKEEPSSHMSPKRALLILICVPVSPGNSRLIWTFP 391
Query: 332 ATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKET---------VPTKELYLN 382
+ P+W H + + + + D+ L + +MK VPTK
Sbjct: 392 RNFGLWTDHIIPRWMLHMSQNLILDSDLYLLHLEERKIMKAGPSNWHKACFVPTK----- 446
Query: 383 LRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGA 442
SD + +R W+ K G + + +LP P
Sbjct: 447 ---SDAHIVAFRAWLRKYSGGQLDWGTNFSSALPPTPP---------------------- 481
Query: 443 IGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFC 502
L +RY+ HV++C CS K + L + + AL + ++ G A
Sbjct: 482 -----KEQLMDRYWSHVVNCSSCSVAYKGLQVLEVVLQIFSIALIGIPVINHGVMSVAAR 536
Query: 503 LASAS---LCLAG 512
+ + S LC A
Sbjct: 537 ITAVSMAILCFAA 549
>gi|257058681|ref|YP_003136569.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8802]
gi|256588847|gb|ACU99733.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8802]
Length = 497
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 122/471 (25%), Positives = 201/471 (42%), Gaps = 70/471 (14%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
A + WT++WYP+ + + + P + + +++VL++D N + RC++DRCPHRL LSEG
Sbjct: 22 ATFQWTKQWYPIAVMEFLDPSRPHPVQLLGKELVLWRDRNNQWRCFEDRCPHRLVPLSEG 81
Query: 135 QL-IDGRLECLYHGWQFEGEGKCVKIPQLPADA------KIPRSACVRTYEVKESQGVVW 187
++ DG L C YH W+F+ GKCV IPQ A PRS C Y +E QG++W
Sbjct: 82 RVEADGTLLCAYHAWRFDETGKCVSIPQSKDKATENQHLNNPRS-CAIAYPTQEQQGLLW 140
Query: 188 VW-------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPI 240
VW + P +P E + + + ++P+ +EN+ DPAH+P+
Sbjct: 141 VWPESGDQAEQESQTRKPRIIPELEEKSDKVVKLFWYVRDMPFGWDYFMENVCDPAHVPV 200
Query: 241 SHDRTDWTAKREDAQPLGFEVTER---TDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNR 297
SH ++ +DA+ + ER T GFA F+ PC+++ +
Sbjct: 201 SHHGM-MGSRYKDAKYYDM-IREREISTQNGFAFSLEPVAPTIEKAVHDFQPPCLMKISS 258
Query: 298 ELVDSKTGEKHYFTGLFL-------CRPTGQGKSMLIVRFGATKRSPLAKLF----PKWY 346
D G K + L++ CR G ++V+ K F P W
Sbjct: 259 TFKD---GAK-FILALYVSPTRPGWCRHIG---CQILVKSNEGKTPKGLAFFALPMPTWL 311
Query: 347 FHQNASKVFEQDMGFLSSQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKWMD-KVGHG 403
H AS QD+ FL Q +++ ++ +Y D V RKW++ + G G
Sbjct: 312 GHILASSFLHQDLVFLHYQEKIIARQGTQNWLSSVY-TPNPQDKMVITLRKWLENRAGGG 370
Query: 404 MPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCK 463
+P+ G + P++P P + L + + H HC+
Sbjct: 371 IPWAEGTN----PELPP-----------------PQRD------KQQLFDVWSTHTQHCR 403
Query: 464 GCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVY 514
C +K + + + A + ++ R A L S SL G +
Sbjct: 404 VCQDALKNINRARLFAYIGAGVCLLFGVILDARM-VAMTLGSQSLKEVGSW 453
>gi|158335992|ref|YP_001517166.1| Rieske (2Fe-2S) domain-containing protein [Acaryochloris marina
MBIC11017]
gi|158306233|gb|ABW27850.1| rieske 2Fe-2S domain protein, ISS putative [Acaryochloris marina
MBIC11017]
Length = 507
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 167/368 (45%), Gaps = 53/368 (14%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+ WT++WYP+ + + + +P + + +++V++ D GE C++DRCPHRLA LSEG++
Sbjct: 38 FQWTQQWYPVAVVEFLAPKSPHAIQLLGKELVIWHDQQGEWHCFEDRCPHRLAPLSEGRI 97
Query: 137 -IDGRLECLYHGWQFEGEGKCVKIPQ------LPADAKIPRSACVRTYEVKESQGVVWVW 189
+DG L C YH W+F+G G+C+ IPQ + PRS C +Y + QG++WVW
Sbjct: 98 EVDGTLMCAYHAWRFDGSGQCLDIPQSRDLETAKQNRANPRS-CAISYPTQVQQGLIWVW 156
Query: 190 ---------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPI 240
+SQ+ +P +P E Q + +LPY +EN+ DPAH+P+
Sbjct: 157 PDPSEDSQTLSQER--SPRIIPELEELPDRAIQLFWYVRDLPYGWDFFMENIADPAHVPV 214
Query: 241 SHDRTDWTAKRE----DAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFL------RFEAP 290
SH R+ D P+ EV+ T GFA PL N + F+ P
Sbjct: 215 SHHGIMGNRYRDANYYDMSPVR-EVS--TQEGFAF-----DITPLANTILRKAVHNFQPP 266
Query: 291 CVLQNNRELVDSKTGEKHYFTGLFLCRPTGQG-----KSMLIVRFGATKRSPLAKLF--- 342
C ++ +++ PT G ++++ K P F
Sbjct: 267 CHMR-----IETTFARDGQMILALYASPTRPGWCRHIGCQVLIKDKDGKTPPGLGFFAWP 321
Query: 343 -PKWYFHQNASKVFEQDMGFLSSQNE-VLMKETVPTKELYLNLRSSDTWVAEYRKWMD-K 399
PKW H A QD+ FL Q + + +E E D V R+W+ +
Sbjct: 322 MPKWLGHVLAPLFLHQDLVFLHYQEKRIGHQEPGDWLETVYTPNPQDKMVIALRQWIKTR 381
Query: 400 VGHGMPYH 407
G G+P+
Sbjct: 382 AGGGIPWQ 389
>gi|384245553|gb|EIE19046.1| hypothetical protein COCSUDRAFT_67947 [Coccomyxa subellipsoidea
C-169]
Length = 737
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 192/484 (39%), Gaps = 93/484 (19%)
Query: 58 VLVGPASAEERRGER------QVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK 111
VL+G R ++ + A + W+++WY + L + + P + + +++VL++
Sbjct: 239 VLLGAVEVARSRSDKDTGTPQEAAPFCWSKQWYAVSLLEALELKKPHPIKLLGKELVLWR 298
Query: 112 DGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS 171
D +G +C++DRC HR A LSEG+++ L C YHGWQF G+CV +PQ R+
Sbjct: 299 DTSGTWQCFEDRCSHRQAPLSEGRVLGDTLMCSYHGWQFAQGGRCVNVPQAEGTRGNERA 358
Query: 172 -----ACVRTYEVKESQGVVWVWMS-------QKTPPNPDKLPWF--ENFAR-------- 209
+CV ++ QG+VWVW + P +PW ++ R
Sbjct: 359 CASPRSCVASFPTTVKQGIVWVWAEPGPLAAIEAAAKGPTLIPWISEDDVTRTPEGVPVI 418
Query: 210 ---PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE-VTERT 265
PG Q +LP + +ENL DPAH +H E A E VT
Sbjct: 419 TVVPGMQ-----RDLPISYEHQMENLADPAHFNFAHHGVAGDMLHESAGTAHVEAVTSDE 473
Query: 266 DRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELV-----DSKTGEKHYFTGL------F 314
+ A G E + L V N +V KT F G+
Sbjct: 474 ETAPAVFDGAEGLAYWVDMLMGVGRSVEHNLHHIVFPGLFTLKTFTPKDFPGVDWELLEI 533
Query: 315 LCRPTGQGKSMLIVR-FGATKRSPL-----AKLFPKWYFHQNASKVFEQDMGFLSSQNEV 368
PT G L+VR F A PL +K P W H ++ + D LS Q+ +
Sbjct: 534 HAVPTEPGHVRLLVRVFLAGHNLPLMPRLVSKYIPTWLSHIRGLEITDGDTVILSEQDRI 593
Query: 369 LMKETVPTKE----LYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEH 424
ET + + Y SSD V RKW+D G G P+
Sbjct: 594 TRSETERSGQEWSKQYYMPTSSDRLVVATRKWLDSRGGGGPF------------------ 635
Query: 425 APAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAA 484
P+ + M + +RY +H C CS+ ++ F +L V+A
Sbjct: 636 -------------PSARPLPAMTNEQMTDRYSQHTSDCPSCSAALRNF----RALRVMAG 678
Query: 485 ALTV 488
L+V
Sbjct: 679 GLSV 682
>gi|427702133|ref|YP_007045355.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
gi|427345301|gb|AFY28014.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
Length = 435
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 175/427 (40%), Gaps = 56/427 (13%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRLAKLSEGQL- 136
W + W+P+ +D+ P T+ D+ +VL+ D G+L R + D CPHRL LS+G++
Sbjct: 6 WRQHWFPVAYLRDLDPARPTAFTLLDEDLVLWWDRAGQLWRAFADVCPHRLVPLSQGRIN 65
Query: 137 IDGRLECLYHGWQFEGEGKCVKIPQLP--ADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
G LEC YHGW F G+G C IPQ A RS C R Y E+QG+++V+ ++
Sbjct: 66 AGGELECPYHGWSFAGDGHCTAIPQAEPGASPSAVRSRC-RAYATAEAQGLLFVFAGEEA 124
Query: 195 PPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDA 254
LP PG+ T +LP D LLEN++D +H+P +H RT KRE+A
Sbjct: 125 DAAAVPLPLVPVLEEPGWFVQDTFRDLPMDALTLLENVLDVSHVPFTHHRT--VGKRENA 182
Query: 255 QPLGFEVTERTDRGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTG 312
P+ +T GF W G + + + AP ++ + D
Sbjct: 183 APVVATITSSGPEGFTALWEEGPRRGKLGSQSTTYAAPGLMWH-----DLTAPSFARILT 237
Query: 313 LFLCRPTGQGKSMLIVR----FGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEV 368
+ P +G+ L R F + L L P+W H V E D FL Q V
Sbjct: 238 VVYATPIRRGECRLFARFPFQFESRLPPLLLGLRPRWLQHIANHTVLEDDQVFLHWQERV 297
Query: 369 LMK--ETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAP 426
L + + + + +D +V W++ H P P
Sbjct: 298 LEQRGRSGGAERAFFLATGADVYVKALHDWVN----------AHDGDPFPGQPLPPRFDR 347
Query: 427 AGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAAL 486
A L+ +R+ H HC C ++ W+ + A+
Sbjct: 348 AALM----------------------DRWESHGRHCASCRGALEGLRRWRP----LVQAI 381
Query: 487 TVLAILA 493
LA+LA
Sbjct: 382 PWLALLA 388
>gi|359460881|ref|ZP_09249444.1| Rieske (2Fe-2S) domain-containing protein [Acaryochloris sp. CCMEE
5410]
Length = 507
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 165/366 (45%), Gaps = 49/366 (13%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+ WT++WYP+ + + + +P + + +++V++ D G+ C++DRCPHRLA LSEG++
Sbjct: 38 FQWTQQWYPVAVAEFLDPKSPHAIQLLGKELVIWHDQQGKWHCFEDRCPHRLAPLSEGRI 97
Query: 137 -IDGRLECLYHGWQFEGEGKCVKIPQ------LPADAKIPRSACVRTYEVKESQGVVWVW 189
+DG L C YH W+F+G G+C+ IPQ + PRS C +Y + QG++WVW
Sbjct: 98 EVDGTLMCAYHAWRFDGSGQCLDIPQSRDLETAKQNRANPRS-CAISYPTQVQQGLIWVW 156
Query: 190 -------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
S + +P +P E Q + +LPY +EN+ DPAH+P+SH
Sbjct: 157 PDPSENSQSLRQERSPRIIPELEELPDRAIQLFWYVRDLPYGWDFFMENIADPAHVPVSH 216
Query: 243 DRTDWTAKRE----DAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFL------RFEAPCV 292
R+ D P+ EV+ T GFA PL N + F+ PC
Sbjct: 217 HGIMGNRYRDANYYDMSPVR-EVS--TQEGFAF-----DITPLANTILRKAVHNFQPPCH 268
Query: 293 LQNNRELVDSKTGEKHYFTGLFLCRPTGQG-----KSMLIVRFGATKRSPLAKLF----P 343
++ +++ PT G ++++ K P F P
Sbjct: 269 MR-----IETTFARDGQMILALYASPTRPGWCRHIGCQVLIKDKDGKTPPGLGFFAWPMP 323
Query: 344 KWYFHQNASKVFEQDMGFLSSQNE-VLMKETVPTKELYLNLRSSDTWVAEYRKWMD-KVG 401
KW H A QD+ FL Q + + +E E D V R+W+ + G
Sbjct: 324 KWLGHVLAPLFLHQDLVFLHYQEKRIGHQEPGDWLETVYTPNPQDKMVIALRQWIKTRAG 383
Query: 402 HGMPYH 407
G+P+
Sbjct: 384 GGIPWQ 389
>gi|242037723|ref|XP_002466256.1| hypothetical protein SORBIDRAFT_01g004450 [Sorghum bicolor]
gi|241920110|gb|EER93254.1| hypothetical protein SORBIDRAFT_01g004450 [Sorghum bicolor]
Length = 480
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/533 (24%), Positives = 205/533 (38%), Gaps = 97/533 (18%)
Query: 24 PTTNVIISLNKTPKSRKCHAVTDRSSTSTVGDHKVLVGPASAEERRGER------QVADY 77
P S + P+SR R T G ++ V +AE+ R E + +
Sbjct: 19 PLAAAAPSNTRRPQSRTYLLAPPRR---TRGAPRLSVSAVAAEKPRAEEAPPSPSKTEAF 75
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQDRCPHRLAKLSEGQL 136
DW ++WYP+ D+ AP G V +V + D G GE R ++D CPHRLA LS+G++
Sbjct: 76 DWLDQWYPIAPVCDLDPRAPHGKVVLGLSVVAWYDRGAGEWRVFEDACPHRLAPLSQGRI 135
Query: 137 I-DGRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSACVRTYEVKESQGVVWVW--- 189
GRL+C YHGW F+G G C IPQ PA R ACV +Y ++W +
Sbjct: 136 DGKGRLQCAYHGWCFDGAGACAFIPQAPALGPPVHENRRACVASYPCVVQNNILWFYPRT 195
Query: 190 -MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWT 248
+ + P+F P + + ++ + + ++N+ D AH+P +H
Sbjct: 196 EAEHRDVLRRKRPPYFAEIDDPSYFTTFGMRDVSVGYDVAVDNIFDIAHVPYAH------ 249
Query: 249 AKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH 308
+G LP F E P E
Sbjct: 250 ------------------KGL-----------LPYFRDEEDPGRYAAGGEAAV------- 273
Query: 309 YFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEV 368
+F + L P G+S +I F L KL P+W+FH ++V + D+ + +
Sbjct: 274 WFMLVALIIPVAPGRSRVIWAFPRNAGVWLHKLIPRWFFHSVTNRVIDSDVCLMHVEERK 333
Query: 369 LMKETVPT--KELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAP 426
+ + Y+ SSD V +R W K H H
Sbjct: 334 FAAAGLENWHRSCYVPT-SSDGMVVAFRDWFRK-------HCNHQV-------------- 371
Query: 427 AGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAAL 486
G A P + +L RY+ HV C CS+ +++ + +L V++ ++
Sbjct: 372 -----GWGAPQPDHQLPPSSTKDHLLERYWSHVAQCTSCSAALRSMRLLEVALQVMSVSV 426
Query: 487 TVLAILASGRQW------KAFCLASASLCLAGVYACSTAIAMN--TTNFIRTH 531
+A G +A + +A LC +T I N +FI ++
Sbjct: 427 IGSLAVAKGSSLLTSVVQRAVVVTAAVLCFMASRWLATYIEKNFYFQDFIHSY 479
>gi|332707041|ref|ZP_08427101.1| Rieske, 2Fe-2S domain protein [Moorea producens 3L]
gi|332354306|gb|EGJ33786.1| Rieske, 2Fe-2S domain protein [Moorea producens 3L]
Length = 502
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 172/372 (46%), Gaps = 48/372 (12%)
Query: 72 RQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKL 131
+Q + WT++WYP+ + + + P + + +++VL++DG+ + RC++D CPHRLA L
Sbjct: 24 KQEETFQWTKQWYPVAVVEFLAPSRPHKIQLLGKELVLWRDGSDQWRCFEDFCPHRLAPL 83
Query: 132 SEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLP------ADAKIPRSACVRTYEVKESQG 184
SEG++ DG L C YH W+F+ EG CV IPQ + P+S C Y +++QG
Sbjct: 84 SEGRVEPDGTLLCAYHAWRFDAEGNCVSIPQSQDQETEVKNCSNPKS-CAVAYPTQQNQG 142
Query: 185 VVWVW-------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 237
++WVW + P +P E+ + + I +LPY +EN+ DPAH
Sbjct: 143 LLWVWPESGSKAQQESQLRKPRLIPELESDSDRVVKLFWNIRDLPYGWDFFMENVADPAH 202
Query: 238 IPISHDRTDWTAKREDAQ----PLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVL 293
+P+SH ++ EDA+ P E++ T GF+ + F+ PC +
Sbjct: 203 VPVSHHGI-MGSRYEDAKYYDMPCLREIS--TQEGFSFAINPTVETVAEAVHDFQPPCHM 259
Query: 294 QNNRELVDSKTGEKHYFTGLFL-------CRPTGQGKSMLIVRFGATKRSPLAKLF---- 342
+ +V S L+ CR G ++V+ A K F
Sbjct: 260 R----IVTSYNDGGKLILALYAIPTRPGWCRHIG---CQVLVKNEAGKTPEGLGFFALPM 312
Query: 343 PKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNL----RSSDTWVAEYRKWMD 398
P W H AS QD+ FL Q ++L + ++ +L+ D V +R+W
Sbjct: 313 PIWLGHVLASVFLHQDLVFLHYQEKILARR---QQQDWLDAVYTPNPQDKMVITFRQWFK 369
Query: 399 K-VGHGMPYHFG 409
K G +P+ G
Sbjct: 370 KRAGGTIPWDSG 381
>gi|224057008|ref|XP_002299110.1| predicted protein [Populus trichocarpa]
gi|222846368|gb|EEE83915.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 187/484 (38%), Gaps = 127/484 (26%)
Query: 60 VGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELR 118
+GP E E + +DW +WYPL D+ P V +V++ D N E +
Sbjct: 69 IGPPEPEVEV-ETKREKFDWYAQWYPLMPVCDLDKRVPHAKKVLGLDVVVWWDRNESEWK 127
Query: 119 CYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACV 174
+ D CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P D + ACV
Sbjct: 128 VFDDTCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKKACV 187
Query: 175 RTYEVKESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYD 224
Y +VW W PN D + P+ P + ++ Y
Sbjct: 188 AAYPSTLHHDIVWFW------PNTDPQYKDIILKKQPPFIPELEDPSYTRTMGNRDIAYG 241
Query: 225 HSILLENLMDPAHIPISHDRTDWT------AKREDAQPLGFEVTERTDRGFAG--RWGKE 276
+ +L+ENLMDPAH+P +H T RE +P+ V + GF G WG
Sbjct: 242 YDVLVENLMDPAHVPYAHYGIMRTQTPKVKVDREGGRPVALSVKKLDINGFDGDQEWGIS 301
Query: 277 KDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRS 336
K F APC+ + +T + G S G K
Sbjct: 302 K---------FIAPCIF--------------YAYTKPLENQGNGAASSA-----GTRKER 333
Query: 337 PLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKW 396
+ D G + Q VPTK SD V +R+W
Sbjct: 334 KI------------------MDAGPANWQKACF----VPTK--------SDALVVGFRRW 363
Query: 397 MDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYF 456
++K G G + +LP P + L +RY+
Sbjct: 364 LNKYAGGEVDWKGKYSGALPPTPPREQ---------------------------LMDRYW 396
Query: 457 RHVIHCKGCSSVIKAFSTWKNSLSVV--AAALTVLAILASGRQ------WKAFCLASASL 508
HV++C+ C++ K N+L VV A+L + I+A+ +Q + +A A +
Sbjct: 397 SHVVNCRSCNAAHKGL----NALEVVLQVASLAFVGIVAATKQNVMSLAARNTMIAMAVV 452
Query: 509 CLAG 512
C AG
Sbjct: 453 CFAG 456
>gi|159478284|ref|XP_001697234.1| pheophorbide a oxygenase [Chlamydomonas reinhardtii]
gi|158274708|gb|EDP00489.1| pheophorbide a oxygenase [Chlamydomonas reinhardtii]
Length = 542
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 135/502 (26%), Positives = 194/502 (38%), Gaps = 106/502 (21%)
Query: 45 TDRSSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFD 104
TD + S G V PA A + W EWYP+ + +D+ P +
Sbjct: 53 TDAVAASGEGAVAPAVSPAPASN--------TFQWHSEWYPVGIIEDLDPRRPHATHLLG 104
Query: 105 QQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLP 163
+ L+KD G+ R +DRC HRLA LSEG++ DG L+C YHGWQF+G G C IPQL
Sbjct: 105 IPLALWKDAQGQWRAVEDRCSHRLAPLSEGRVEKDGTLQCAYHGWQFDGRGACTHIPQLR 164
Query: 164 ADAK------IPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPW--FENFARP----- 210
D K R +CVR Y + + G++WV P+ W E P
Sbjct: 165 NDEKAQQVACASRRSCVRAYPTQVAHGLLWVL------PDSSAAGWEKVEVVVTPAACLQ 218
Query: 211 -GFQDVSTIHEL---------------------PYDHSILLENLMDPAHIPISHDRTDWT 248
G V+ I EL P IL ENL+DPAH+P +H
Sbjct: 219 AGTVPVTAIPELLAPGGSANGRSQFGNWYARDMPVRFDILAENLLDPAHLPFAHHGVMGN 278
Query: 249 AKREDAQPLGFEVTERTD-RGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEK 307
+E G T RTD G AG K + ++AP L+ + G
Sbjct: 279 RNKEQ----GSSTTLRTDTMGVAGFVCDAKLNGPEGTVSWQAP-------SLIKYEFGSL 327
Query: 308 HYFTGLFLCRPTGQG------KSMLIVRFGATKRSP---LAKLFP--KWYFHQNASK-VF 355
+ T L C P G ++L + P L KL +W+ H +
Sbjct: 328 PFIT-LLYCVPAKPGWSRFYSATVLDANVKSAIPGPAIALVKLISNIRWFDHVTRRHLIL 386
Query: 356 EQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISL 415
+ D L Q +L+++ + Y +D V R+W D+ G +P + L
Sbjct: 387 DGDTYMLHVQERLLLEKNNDWRGAYYMPAPADGSVVATRRWFDEHGGAVPT--CEPGVQL 444
Query: 416 PKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAF--S 473
P M + RY +H +CK CS ++ +
Sbjct: 445 PP---------------------------QMSKEAVLERYHQHTKNCKDCSQALRNVETA 477
Query: 474 TWKNSLSVVAAALTVLAILASG 495
TW + V AAL ++A +G
Sbjct: 478 TWLAAGGGVLAALVLVARAVAG 499
>gi|428298626|ref|YP_007136932.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
gi|428235170|gb|AFZ00960.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
Length = 498
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 160/370 (43%), Gaps = 41/370 (11%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+ W ++WYP+ + + P G+ + + IVL++DG+G+ C++D CPHRL LSEG++
Sbjct: 25 FQWKKQWYPVAVVDFLDSSRPHGMQLLGKDIVLWRDGSGKWCCFEDACPHRLVPLSEGRV 84
Query: 137 -IDGRLECLYHGWQFEGEGKCVKIPQLP---ADAK---IPRSACVRTYEVKESQGVVWVW 189
DG L C YH W+F+ +G CV IPQ +AK P+S C Y +E QG++WVW
Sbjct: 85 EADGTLLCAYHAWRFDSQGNCVNIPQTKDKQTEAKHCSNPKS-CAVVYPTQEKQGLLWVW 143
Query: 190 -------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ + P LP EN + + +LPY +EN+ DPAH+P+SH
Sbjct: 144 AESGSQALVESQLKAPRILPELENQSDKVIKLFWNFRDLPYGWDFFMENVADPAHVPVSH 203
Query: 243 DRTDWTAKREDAQPLGFEVT----ERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRE 298
++ P +++ T GF+ + F+ PC ++
Sbjct: 204 HGIVGNRYKD---PRYYDMIGLRQMSTQEGFSYEVTPTAANIKQSIADFQPPCHMR---- 256
Query: 299 LVDSKTGEKHYFTGLFL-------CRPTGQGKSMLIVRFGATKRSPLAKLF----PKWYF 347
+V + L+ CR G ++V+ K P F P W
Sbjct: 257 IVSTFEDGGQMILALYATPTRPGWCRHIG---CQVLVKNHENKTPPGLGFFALPMPIWLG 313
Query: 348 HQNASKVFEQDMGFLSSQNEVL-MKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPY 406
H AS QDM FL Q + L K+ + D V +R W++K G
Sbjct: 314 HILASIFLHQDMVFLHYQEKALAQKQNDRWLDAVYTPNPQDKMVIAFRNWLEKRAGGNID 373
Query: 407 HFGHSTISLP 416
+ LP
Sbjct: 374 WASEYNVQLP 383
>gi|290975135|ref|XP_002670299.1| predicted protein [Naegleria gruberi]
gi|284083856|gb|EFC37555.1| predicted protein [Naegleria gruberi]
Length = 443
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 190/401 (47%), Gaps = 60/401 (14%)
Query: 51 STVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVP--DDAPLGLTVFDQQIV 108
S + K ++ + + + V + + T WYP+ L+KDV D P + +F + +
Sbjct: 30 SFIFKQKNIIEKFPNDTFKTKSDVTNLEMTLFWYPVALSKDVSITDSKPKTIKLFGEPLA 89
Query: 109 LYKDGNGELRCYQDRCPHRLAKLSEGQL--IDGR--LECLYHGWQFEGEGKCVKIPQLPA 164
LY+ +G + C +D CPHR AKLS GQ+ +G+ LEC YHGW+FE EG+CV+IP + +
Sbjct: 90 LYRTSDGNITCVKDLCPHRSAKLSTGQVTEFEGKRSLECAYHGWRFEKEGQCVRIPSVSS 149
Query: 165 DAKIPRSACVR--TYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD-------- 214
+ + ++ +V E G++WV+ + K + +++P E F D
Sbjct: 150 ERMKGLCSTIKCQAKQVHECCGLIWVFPNDKVKADINQIP-LELFREEFLTDDSSKLEVL 208
Query: 215 VSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTD-------- 266
+ +LP +S +LENL+DPAH+ +HD T KR A + ++ D
Sbjct: 209 IENTRDLPCHYSFVLENLLDPAHLDFTHDGT--IGKRSQATQIQSQLVISKDIPSDNPSR 266
Query: 267 ---------------RGFAGRWGKEKDEPLPNF-------LRFEAPCVLQNNRE--LVDS 302
F R+ K + + +P L F PC ++ + + +
Sbjct: 267 RLIPKEMQYDQSIHQDSFTYRFTKPEFKKIPGLKSEFMVQLSFIPPCFVRMDTTDYIANE 326
Query: 303 KTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKR--SPLAKL-FPKWYFHQNASKVFEQDM 359
++G + + +F PTG+G+ +I +F ++ + L K+ F + F + +F+QD+
Sbjct: 327 RSGPR--MSQVFCLIPTGEGEVKVIFKFYSSLSILNFLNKIPFIRNKFAKTVDMIFDQDL 384
Query: 360 GFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKV 400
L+ E + +++ + ++D + YR+W K+
Sbjct: 385 ELLAGVYENVNNGV----KVFSKIVNADAPIKGYREWEAKM 421
>gi|384249925|gb|EIE23405.1| ISP domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 496
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 189/471 (40%), Gaps = 84/471 (17%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG-NGELRCYQDRCPHRLAKLSEGQ 135
+DW +WYPL +D+ P + + +++V++ D + ++DRCPHRLA LSEG+
Sbjct: 46 FDWARQWYPLAFVEDLDPGRPHAMELLGKRLVIWYDSRQHKWTAFEDRCPHRLAPLSEGR 105
Query: 136 L--IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA------CVRTYEVKESQGVVW 187
+ DG L C YHGW+F G+G C +IPQ DA+ +A C + + SQG VW
Sbjct: 106 IEPSDGTLMCSYHGWRFRGDGACTRIPQA-LDARAEDTACSSGRSCAAVHPTQVSQGYVW 164
Query: 188 VW---------MSQKTPP--NPDKLPWFENFARPGFQDVST----IHELPYDHSILLENL 232
VW S PP P+ P A G +S +LPY +L+EN
Sbjct: 165 VWGDCSASAAAESALMPPLLIPELSPDDTGQATDGGPVISAASRYARDLPYSWDVLVENF 224
Query: 233 MDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCV 292
+DP+H+ +H RE FE++ TDRG + P + +
Sbjct: 225 LDPSHVSFAHHGVQ--GNRESENVGVFEISP-TDRG-------DPMHPPQEAISMDVKSA 274
Query: 293 LQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSM----LIVRFGATKR--SPLAKLFPKWY 346
R G+ + PTG G+S LIV LA L P+W
Sbjct: 275 AFGTR------GGKVKWSQMPMFVVPTGPGRSRVLWWLIVHADGLPAPFRALAGLKPRWA 328
Query: 347 FHQNASKVFEQDMGFLSSQNEVLMKETVPT---KELYLNLRSSDTWVAEYRKWMDKVGHG 403
H + VF+ D L Q VL ++ + Y +D V +R+W ++ G
Sbjct: 329 DHLTRNLVFDGDNIILHIQERVLAEDRRKGGSWRRSYFMPTQADRIVTAFRQWFEERAGG 388
Query: 404 MPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCK 463
P + +A A + P++ L +RY H HCK
Sbjct: 389 GP---------------IAGNADADRI------EPSRAV--------LLDRYSSHTRHCK 419
Query: 464 GCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLASASLCLAGVY 514
CS + L V AL VL+ L W L AG++
Sbjct: 420 SCSQALGV----AKVLQVAVTALAVLSTLGLA-YWVGSRGGQPPLVTAGIF 465
>gi|219130881|ref|XP_002185582.1| Tic55 component of chloroplast import machinery [Phaeodactylum
tricornutum CCAP 1055/1]
gi|217402990|gb|EEC42947.1| Tic55 component of chloroplast import machinery [Phaeodactylum
tricornutum CCAP 1055/1]
Length = 498
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/453 (28%), Positives = 200/453 (44%), Gaps = 85/453 (18%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL--IDGR 140
W PL ++ D P L Q V Y+ +G+ + D CPHRLA LSEG++ R
Sbjct: 61 WVPLASVYELHPDRPTPLRFLGQSYVTYQSNDGQWAVFDDACPHRLAPLSEGRVDRQKNR 120
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVVWVWMSQKT 194
LEC YHGW+F+ +G+C +IPQ AD + A V++Y V + +++VW
Sbjct: 121 LECSYHGWEFDADGRCQEIPQ--ADFSTMQKAMQNERCHVKSYPVHVEKNILFVWPWADE 178
Query: 195 PP-----NPDKLPWFENFARPGFQDVST-IHELPYDHSILLENLMDPAHIPISHDRTDWT 248
P P P E+F ++ +T +LPY LLEN++DP+H+P +H
Sbjct: 179 DPLITVSQPHCAP--EHFMEGVSENCTTYTRDLPYGWDTLLENIVDPSHVPFAHH--GLQ 234
Query: 249 AKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLR----FEAPCVLQN-------NR 297
KREDA P+ +T +D G + +D + + F AP V+ ++
Sbjct: 235 GKREDAIPIN--MTSPSDLSPEGFVFQFEDRTMSMRRQGGAVFRAPFVIHYKADFETPSK 292
Query: 298 ELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGA---------TKRSPLAKLF---PKW 345
E + F + PT G S +I+ GA K +AK+F P W
Sbjct: 293 EKQKKRANSPKVFNLTAIMLPTKPGWSRIIL-MGAPRTKQIEKKEKERLVAKIFRKLPSW 351
Query: 346 YFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMP 405
H +++ + D+ FL Q + + V + ++ + SD V+ RKW+ + H
Sbjct: 352 LVHTFSNRFLDSDLAFLHFQEQERERRGVDARAYFMPAQ-SDRCVSALRKWILQYAH--- 407
Query: 406 YHFGHSTISLPKVPAVVEHAPAGLV-AGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKG 464
+P + PA L GV L NR+ +H HC+
Sbjct: 408 ------------IPGPL---PAPLTDRGV-----------------LFNRWTQHGEHCRH 435
Query: 465 CSSVIKAFSTWK-NSLSVVAAALTVLAILASGR 496
C+S K + W+ N+L ++A +L VLA + R
Sbjct: 436 CTSARKRVAKWRTNTLRLLAISL-VLAKFTAAR 467
>gi|323449061|gb|EGB04952.1| hypothetical protein AURANDRAFT_11520 [Aureococcus anophagefferens]
Length = 383
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 107/348 (30%), Positives = 156/348 (44%), Gaps = 39/348 (11%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLID 138
W + W+PL D+ P + V +VL++DG+ + R DRCPHR A+LSEG++ D
Sbjct: 3 WFDRWWPLAFESHAFDEKPQHVEVLGAPVVLWRDGD-DWRAALDRCPHRFARLSEGRVAD 61
Query: 139 -GRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ---- 192
G +EC YHGW F+G G C IPQ R+ V G++WVW S
Sbjct: 62 DGCIECPYHGWTFDGATGACKAIPQ--GSTPTARAGATALPTVARG-GLIWVWTSALYDG 118
Query: 193 --KTPPNPDKLPWF----ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 246
P+ L E F G ELP D ++LLEN+MDP+H+P +H T
Sbjct: 119 AANAAPDVGALDALSLQAEVFDAGGASIADYSRELPMDATMLLENVMDPSHLPYTHHDT- 177
Query: 247 WTAKREDAQPLGFEVTE-RTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
+KR +A P+ + TD GF + F+R++AP ++ + D G
Sbjct: 178 -ISKRANAGPIDLRLDRPATDEGFTLAKSFPDRADVSGFVRYDAPSLVLSE---TDRGPG 233
Query: 306 EKHYFTGLFLCRPTGQGKSMLIVR--FGATK-RSPLAKLF-------PKWYFHQNASKVF 355
+ ++ P G+ L VR F +K P +F P W H + KV
Sbjct: 234 GFRDWNVVYAV-PVAPGRCRLFVRVVFEVSKLEGPQKFVFERILPNAPPWAIHLSNHKVL 292
Query: 356 EQDMGFLSSQNEVLMKETV--PT---KELYLNLRSSDTWVAEYRKWMD 398
E D FL L + P + LY+ ++D V YR+W+D
Sbjct: 293 EDDNVFLHHAGAALRDDDALHPADWERRLYMPT-AADAGVRAYRRWLD 339
>gi|384252187|gb|EIE25663.1| ISP domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 357
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 151/318 (47%), Gaps = 34/318 (10%)
Query: 71 ERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGNGELRCYQDRCPHRLA 129
++ A YDW ++WYP++ D+P+ P + +FD+ IV+ + G G + DRCPHR A
Sbjct: 47 QQSEAFYDWRQQWYPVHYAADLPEGDPQRVWLFDEAIVVARRPGKGPI-AMLDRCPHRAA 105
Query: 130 KLSEGQLID-GRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 187
LS+G++ G L+C YHGW F+G+ G C IPQ+ I C E QG+VW
Sbjct: 106 ALSQGRMTAAGNLQCAYHGWSFDGKTGDCTNIPQVSQGGTISGRTCATALPCAEYQGIVW 165
Query: 188 VWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDW 247
V+ S P+ D + PG+ I + P D +++LEN+ DP H +H T +
Sbjct: 166 VYPSPGARPSTDTIVGLPELDEPGWTSDDFIRDFPVDFTLVLENVADPDHGVFAHQTTIF 225
Query: 248 TAKREDAQPLGFEVTERTDRG-------------FAGRWGKEKDEPL-------PNFLRF 287
+ A+ +V+ +G GR G +KD+ + + L F
Sbjct: 226 DSFAASAE-YPMQVSTEPGKGGPKVIGRVPGVLKMTGR-GSDKDKAMFGEQANVTSTLAF 283
Query: 288 EAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF-PKWY 346
E P +++ +R DS +G + T + C P G G++ R+ R+ +L P W
Sbjct: 284 EPPTLVRWSR--FDS-SGTTRFITAFYCC-PAGVGRTRFFTRY---VRNIAPQLHPPHWL 336
Query: 347 FHQNASKVFEQDMGFLSS 364
F+ + +Q F S
Sbjct: 337 FNIFLNAFLDQAGPFSCS 354
>gi|298705514|emb|CBJ28781.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 190
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 101/165 (61%), Gaps = 19/165 (11%)
Query: 83 WYPLYLTKDVPDDA-PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI-DGR 140
WY + +D+ + P +++FD+ ++LY+D +G L+C D CPHR AKLSEGQ+ DG
Sbjct: 30 WYAVGYDRDIVEGPKPFAVSIFDEPLMLYRDTSGALQCVSDFCPHRAAKLSEGQITEDGN 89
Query: 141 LECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK------ 193
+ECLYHGWQFEG +G CVK+PQLP A PR+A +R Y + ++GVV+VWM +
Sbjct: 90 IECLYHGWQFEGSKGACVKVPQLPEGATPPRAATLRVYPLAVNEGVVYVWMGENPWGEGA 149
Query: 194 -----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLM 233
P PD L + +P F + +LPYD S L ENL+
Sbjct: 150 KDILPIPSTPDNL----DENKPTFT-YEFVCDLPYDWSYLTENLV 189
>gi|384246692|gb|EIE20181.1| PaO-domain-containing protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 370
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 165/355 (46%), Gaps = 46/355 (12%)
Query: 69 RGERQVADYDWTEE----WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRC 124
R ++ +D D E+ WYP+ + + D A + + +F + VL++D G C +D C
Sbjct: 1 RNKQLQSDLDLPEQLQDFWYPVAFSSQLKDGAMVTMELFGKPWVLFRDAQGLPSCVKDAC 60
Query: 125 PHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQG 184
HR LS G ++DG ++C YHGWQ++G G C K+P + V T V ES+G
Sbjct: 61 AHRACPLSLGSVVDGCIQCPYHGWQYDGSGNCTKMP----STAFCKGITVSTLPVSESEG 116
Query: 185 VVWVWMSQKTPPNPDKLPWFENFARP--GFQ-DVSTIHELPYDHSILLENLMDPAHIPIS 241
VWVW + P + +P ++ RP GF I E+P +H +LLENL+D AH P +
Sbjct: 117 FVWVWPGRSVPEH--NVP--QHVTRPPDGFTVHAELILEVPVEHGLLLENLLDLAHAPFT 172
Query: 242 HDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVD 301
H T+ P+ V R G W EP P + FE PC++ + L
Sbjct: 173 H-----TSTFAKGWPVPDVVKFNAARMLGGNW-----EPYPIDMAFEPPCMVLSTIGLAQ 222
Query: 302 SKTGE--------KHYFTGLFLCRPTGQGKSMLIVRFGA-----TKRSPLAKLFPKWYFH 348
E K++ L +C P G G++ L+ R TK P + F +
Sbjct: 223 PGKIERGARAASCKNHLHQLHVCLPAGPGRTRLLYRMSMDFLQWTKAVPGIQAF----WA 278
Query: 349 QNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
A +V +D+ ++ Q + +++ +++ N + D YR+W + V G
Sbjct: 279 HIAKQVMGEDLVLVAGQQDRMLR----GADVWANPVAYDKLGVRYRRWRNSVAAG 329
>gi|345846655|gb|AEO19899.1| pheophorbide a oxygenase [Pyrus x bretschneideri]
Length = 311
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 120/220 (54%), Gaps = 16/220 (7%)
Query: 63 ASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQD 122
+ +E + ++W + WYP+ L +D+ P + + +V++ DG + + D
Sbjct: 80 GAEDEIEDATSTSKFNWRDHWYPVSLIEDLDPRLPSPFQLLGRDLVIWYDGESWV-AFDD 138
Query: 123 RCPHRLAKLSEGQLIDG-RLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRT 176
RCPHRLA LSEG++ +G L+C YHGW F+G G CVKIPQ ++ R+ AC
Sbjct: 139 RCPHRLAPLSEGRIDEGGNLQCSYHGWSFDGCGSCVKIPQASSEGPEARAVRSPRACATR 198
Query: 177 YEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLEN 231
+ SQG+++VW + P LP + F++P F V+ +L Y + L+EN
Sbjct: 199 FPTLVSQGLLFVWPDENGWERANATKPPMLP--DEFSKPEFSSVTIQRDLFYGYDTLMEN 256
Query: 232 LMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAG 271
+ DP+HI +H + T +R+ A+PL F++ + GF+G
Sbjct: 257 VSDPSHIDFAHHKV--TGRRDRAKPLPFKLEDSGPWGFSG 294
>gi|209528461|emb|CAR82238.1| pheophorbide a oxygenase [Pisum sativum]
Length = 282
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 145/287 (50%), Gaps = 36/287 (12%)
Query: 107 IVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG-RLECLYHGWQFEGEGKCVKIPQLPAD 165
++ Y + + + D+CPHRLA LSEG++ +G L+C YHGW F+G G C IPQ +
Sbjct: 8 VIWYDNSKSQWVVFDDKCPHRLAPLSEGRIDEGGNLQCSYHGWSFDGSGGCAVIPQASPE 67
Query: 166 AKIPRS-----ACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPGFQDV 215
R+ AC + SQG+++VW + P LP ++F +P F V
Sbjct: 68 GPESRAIRSPRACATRFPTLVSQGLLFVWPDENGWEKANASKPPMLP--DDFVKPEFAMV 125
Query: 216 STIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGK 275
+ +L Y + L+EN+ DP+HI +H + T +R+ A+PL F++ GF+G
Sbjct: 126 NIQRDLFYGYDTLMENVSDPSHIDFAHHKV--TGRRDRAKPLPFKMDSGGSWGFSG---- 179
Query: 276 EKDEPLPNF-LRFEAPCVLQNNRELVDSK---TGEKHYFTGLFLCR---PTGQGKSMLIV 328
+E P +F APC N E +D+K G++ + +++C P GK+ IV
Sbjct: 180 -ANEGNPRISSKFVAPCYYINKVE-IDTKLPIVGDQKWV--IWICSFNVPMAPGKTRSIV 235
Query: 329 -----RFGATKRSP-LAKLFPKWYFHQNASKVFEQDMGFLSSQNEVL 369
F T P ++ P+WY H ++KV++ DM L Q +V
Sbjct: 236 CSARNFFQFTVPGPSWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKVF 282
>gi|38488613|dbj|BAD02269.1| chlorophyllide a oxygenase [Prochlorothrix hollandica]
Length = 366
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 161/376 (42%), Gaps = 52/376 (13%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ +K++ PLG +FDQ VL++D G C D C HR LS G++I GR++
Sbjct: 21 WYPVEFSKNLGMADPLGFELFDQCWVLFRDDQGTAACILDECAHRACPLSLGKVIQGRIQ 80
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN-PDKL 201
C YHGW+++ +G+CV +P A S + T V E G++WVW P P
Sbjct: 81 CPYHGWEYDRQGECVHMPSCQA-----ISNPILTLPVMEQGGMIWVWPGTDEPGALPSLA 135
Query: 202 PWF-ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
P +NF + +L +H ++LENL+D AH P +H T AK P
Sbjct: 136 PTLPDNFTL----QAELVMDLEVEHGLMLENLLDLAHAPFTHTGT--FAKGWPVPPF-VR 188
Query: 261 VTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTG 320
+ G W +P P + FE PC + + L G + + C P G
Sbjct: 189 FANAATTPWTGHW-----DPYPIHMTFEPPCFVISTIGLRGKDCGR--HLHQVHACLPRG 241
Query: 321 QGKSMLIVRFGATKRSPLAKLFPKW---------YFHQNASKVFEQDMGFLSSQNEVLMK 371
QG++ L+ R LA F W + A++V ++D+ + Q E L
Sbjct: 242 QGRTRLLYR--------LALDFGHWLRWVPGTHCLWQHLANRVIQEDLRLVQGQQERLKG 293
Query: 372 ETVPTKELYLNLRSSDTWVAEYRKWMDKVG-HGMPYHFGHSTISLPKVPAVVEHAPAGLV 430
++ D YR W ++V HG + P+ PA PA
Sbjct: 294 ----GANVWNQPVGYDKLGVAYRHWRNQVERHGSDW---------PESPADEGREPALNA 340
Query: 431 AGVSASSPAKGAIGTM 446
+ +P G++ ++
Sbjct: 341 IVTGSDAPITGSVVSL 356
>gi|125546117|gb|EAY92256.1| hypothetical protein OsI_13977 [Oryza sativa Indica Group]
Length = 525
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 135/530 (25%), Positives = 202/530 (38%), Gaps = 92/530 (17%)
Query: 1 MALSLRSLFFSPLLKIPSPKLTPPTTNVIISLNKTPKSR---KCHAVTDRSSTSTVGDHK 57
++L+ SL F + PS PP IS + R AV + D K
Sbjct: 9 LSLTRLSLPFRDTVTNPSTPRIPPWRRQWISPTDARRRRLSMPVSAVAAEAPLPRAVDEK 68
Query: 58 VLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-E 116
PA+ EER +DW ++WYP+ +D+ P G V +V++ DG G E
Sbjct: 69 ET--PAAGEER--------FDWLDQWYPVAPVRDLDKRKPHGKMVMGISVVVWFDGGGGE 118
Query: 117 LRCYQDRCPHRLAKLSEGQLIDGR--LECLYHGWQFEGEGKCVKIPQLPA---DAKIPRS 171
R D CPHRLA LSEG+ +DG+ L+C YHGW F+G G C IPQ PA
Sbjct: 119 WRVVDDACPHRLAPLSEGR-VDGKGCLQCAYHGWCFDGHGSCQFIPQAPALGPPVHKNSK 177
Query: 172 ACVRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHS 226
ACV +Y ++W + + P + L P+ P S + +L Y +
Sbjct: 178 ACVASYPSVVQNNILWFY-PRSEPEYKEILQRKRPPYIRELDDPSSVINSGVRDLLYGYR 236
Query: 227 ILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAG----RWGKEKDEPLP 282
L+ + + S + +E P+ + E GF WG
Sbjct: 237 NYLQAIHK--QLDASMYVCVFEFDQEGGLPIKMNIEELNIAGFHSNPEENWG-------- 286
Query: 283 NFLRFEAPCVL------------QNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRF 330
+ +F AP L Q+N + K E T +F C P G+ +I
Sbjct: 287 -YFKFIAPVTLIGSPFRAKPVVDQDNNNTNNKKQPE---VTTVFFCIPVSPGRCRVIWAN 342
Query: 331 GATKRSPLAKLFPKWYFHQNASKVFEQDMGFL--SSQNEVLMKETVPTKELYLNLRSSDT 388
G K+ P+W+ H ++V + D L +N K Y+ SSD
Sbjct: 343 GYNLDGWFDKMIPRWWLHIKTNQVLDSDSSVLHIEKRNYAAFGLDNWHKACYVPT-SSDN 401
Query: 389 WVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHA 448
+ +R W K + LP VE
Sbjct: 402 LIIAFRNWFKKYCNNQVGWLTPMVNQLPPASTRVE------------------------- 436
Query: 449 PNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVV--AAALTVLAILASGR 496
+ RY+ HV+ C CS+ +K W +L V A++ V+ LA+G+
Sbjct: 437 --VYERYWSHVMQCTSCSAALK----WMRALEVALQVASVAVVGFLAAGK 480
>gi|115456065|ref|NP_001051633.1| Os03g0805900 [Oryza sativa Japonica Group]
gi|30102995|gb|AAP21408.1| putative cell death suppressor protein [Oryza sativa Japonica
Group]
gi|108711643|gb|ABF99438.1| Rieske domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113550104|dbj|BAF13547.1| Os03g0805900 [Oryza sativa Japonica Group]
gi|222629206|gb|EEE61338.1| hypothetical protein OsJ_15461 [Oryza sativa Japonica Group]
Length = 525
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 135/530 (25%), Positives = 202/530 (38%), Gaps = 92/530 (17%)
Query: 1 MALSLRSLFFSPLLKIPSPKLTPPTTNVIISLNKTPKSR---KCHAVTDRSSTSTVGDHK 57
++L+ SL F + PS PP IS + R AV + D K
Sbjct: 9 LSLTRLSLPFRDTVTNPSTPRIPPWRRQWISPTDARRRRLSMPVSAVAAEAPLPRAVDEK 68
Query: 58 VLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG-E 116
PA+ EER +DW ++WYP+ +D+ P G V +V++ DG G E
Sbjct: 69 ET--PAAGEER--------FDWLDQWYPVAPVRDLDKRKPHGKMVMGISVVVWFDGGGGE 118
Query: 117 LRCYQDRCPHRLAKLSEGQLIDGR--LECLYHGWQFEGEGKCVKIPQLPA---DAKIPRS 171
R D CPHRLA LSEG+ +DG+ L+C YHGW F+G G C IPQ PA
Sbjct: 119 WRVVDDACPHRLAPLSEGR-VDGKGCLQCAYHGWCFDGHGSCQFIPQAPALGPPVHKNSK 177
Query: 172 ACVRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHS 226
ACV +Y ++W + + P + L P+ P S + +L Y +
Sbjct: 178 ACVASYPSVVQNNILWFY-PRSEPEYKEILQRKRPPYIRELDDPSSVINSGVRDLLYGYR 236
Query: 227 ILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAG----RWGKEKDEPLP 282
L+ + + S + +E P+ + E GF WG
Sbjct: 237 NYLQAIHK--QLDASMYVCVFEFDQEGGLPIKMNIEELNIAGFHSNPEENWG-------- 286
Query: 283 NFLRFEAPCVL------------QNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRF 330
+ +F AP L Q+N + K E T +F C P G+ +I
Sbjct: 287 -YFKFIAPVTLIGSPFRAKPVVDQDNNNTNNKKQPE---VTTVFFCIPVSPGRCRVIWAN 342
Query: 331 GATKRSPLAKLFPKWYFHQNASKVFEQDMGFL--SSQNEVLMKETVPTKELYLNLRSSDT 388
G K+ P+W+ H ++V + D L +N K Y+ SSD
Sbjct: 343 GYNLDGWFDKMIPRWWLHIKTNQVLDSDSSVLHIEERNYAAFGLDNWHKACYVPT-SSDN 401
Query: 389 WVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHA 448
+ +R W K + LP VE
Sbjct: 402 LIIAFRNWFKKYCNNQVGWLTPMVNQLPPASTRVE------------------------- 436
Query: 449 PNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVV--AAALTVLAILASGR 496
+ RY+ HV+ C CS+ +K W +L V A++ V+ LA+G+
Sbjct: 437 --VYERYWSHVMQCTSCSAALK----WMRALEVALQVASVAVVGFLAAGK 480
>gi|434403930|ref|YP_007146815.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
gi|428258185|gb|AFZ24135.1| ring-hydroxylating dioxygenase, large terminal subunit
[Cylindrospermum stagnale PCC 7417]
Length = 502
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 164/360 (45%), Gaps = 45/360 (12%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+ WT++WYP+ + + + P + + + VL++D G+ C++D CPHRL +LSEG++
Sbjct: 25 FQWTKQWYPVAIGECLDPSKPQPIELLGKNFVLWRDKQGKWNCFEDLCPHRLVRLSEGRV 84
Query: 137 -IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVWVW- 189
DG L C YH W+F GKCV +PQ + R+ +CV Y ++E QG++W+W
Sbjct: 85 ESDGTLLCAYHAWRFNSVGKCVSMPQSKDEETEARNCASSRSCVTVYPLQERQGLLWLWP 144
Query: 190 ------MSQKTPPNPDKLPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ + P +P E R + I +LPY +EN+ DPAH+P+SH
Sbjct: 145 ESGSQALIESKLKEPRVIPELEETPERIVNRSAWNIRDLPYGWDYFIENIADPAHVPVSH 204
Query: 243 DRTDWTAKREDAQPLGFEVTER--TDRGFAGRWGKEKDEPLPNFLR-----FEAPCVLQN 295
++ +DA + T GF+ + +P P + F+ PC++
Sbjct: 205 HNIM-GSRYKDANYFDMVSVRKLSTQEGFSF-----ETKPTPPDIETLINDFQPPCLM-- 256
Query: 296 NRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVR--FGATKRSPLAKL--------FPKW 345
R K+G K+ T P G + LI F ++ + K P W
Sbjct: 257 -RVYSVDKSGCKYILT--LYGVPIRPGWTRLIGNQIFVKNEKGEVPKKGLGFFALPMPIW 313
Query: 346 YFHQNASKVFEQDMGFLSSQNEVLMKETVPTKEL--YLNLRSSDTWVAEYRKWMDKVGHG 403
H +S + QD FL Q E LM ++ K L SD V +R+W +K G
Sbjct: 314 LTHILSSMLLHQDSVFLHYQ-EKLMAQSPQEKWLAKVYTPNPSDKMVITFRQWWEKRAGG 372
>gi|282154870|dbj|BAI60053.1| pheophorbide a oxygenase [Brassica oleracea]
Length = 299
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 152/303 (50%), Gaps = 37/303 (12%)
Query: 105 QQIVLYKDGNGE-LRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQL 162
+ +VL+ D N + + D CPHRLA LSEG+L + G L+C YHGW F G G C +IPQ
Sbjct: 3 RDLVLWFDRNDQKWAAFDDLCPHRLAPLSEGRLDENGHLQCSYHGWSFAGCGSCTRIPQA 62
Query: 163 PADA------KIPRSACVRTYEVKESQGVVWVWMSQK-----TPPNPDKLPWFENFARPG 211
K PR AC + SQG+++VW + P +LP ++F +P
Sbjct: 63 ATSGPEARAVKSPR-ACAIKFPTMVSQGLLFVWPDENGWDRANSIEPPRLP--DDFDKPE 119
Query: 212 FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAG 271
F V+ +L Y + L+EN+ DP+HI +H + T +R+ A+PL F+V GF G
Sbjct: 120 FSTVTIQRDLFYGYDTLMENVSDPSHIDFAHHKV--TGRRDRAKPLPFKVESSGPWGFQG 177
Query: 272 RWGKEKDEPLPNFLRFEAPCVLQNNRELVDSK---TGEKHYFTGLFLCR---PTGQGKSM 325
D+ +F APC N E +D+K G + + +++C P GK+
Sbjct: 178 ----ANDDSPKITAKFVAPCYSLNKIE-IDAKLPIVGNQKWV--IWICSFNIPMAPGKTR 230
Query: 326 LIV-----RFGATKRSP-LAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKEL 379
IV F + P ++ P+WY H ++ V++ DM L Q +V + +++ + +
Sbjct: 231 SIVCSARNFFQFSVPGPAWWQVVPRWYEHWTSNLVYDGDMIVLQGQEKVFLSKSMESPDY 290
Query: 380 YLN 382
+N
Sbjct: 291 DVN 293
>gi|409096514|ref|ZP_11216538.1| Rieske (2Fe-2S) domain-containing protein [Thermococcus zilligii
AN1]
Length = 319
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 158/341 (46%), Gaps = 37/341 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+ + +K+V D P+G+ F + IVL++D NG++ +D C HR A+LS G++I+GRL+
Sbjct: 2 WFAILSSKEVRKDRPVGVVRFGRNIVLWRDENGKVNAIEDSCVHRRARLSAGKVINGRLQ 61
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C +HG++++G+G+ IP L ++P V+ Y V E G++W+W + P +
Sbjct: 62 CPFHGFEYDGDGRVKLIPALGRSYRVPERFSVKAYNVAEKAGMIWMWFGEGEPGGEPRF- 120
Query: 203 WFENFARP-GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKRE--------- 252
FE+ + ++ +P+ ++ EN +D H+P H T R
Sbjct: 121 -FEDIDKKFACAEIQETWNVPFPRAV--ENQLDVMHLPFVHRTTIGRGNRTLVNGPVVKW 177
Query: 253 -DAQPLGFEVTERTDRG-FAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYF 310
D F V DRG A + G+ + +L F P V QN+ EK
Sbjct: 178 IDGDSFVFYVFNEVDRGQIAKKPGELEGLESRVYLEFIFPNVWQNH-------ISEKVRV 230
Query: 311 TGLFLCRPTGQGKSMLIVRF--GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEV 368
F+ P + K+M+ +RF AT PL +L K N V QD + +Q
Sbjct: 231 VAFFV--PVTKEKTMIYLRFYIKATGIRPLDRLIAKLGMRFNKV-VLHQDRRVVETQEWD 287
Query: 369 LMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFG 409
+ K++ L D + E+RK + + + + FG
Sbjct: 288 IRKDS---------LVQGDLPIMEFRKRLYREKKLVEFLFG 319
>gi|449527266|ref|XP_004170633.1| PREDICTED: LOW QUALITY PROTEIN: protochlorophyllide-dependent
translocon component 52, chloroplastic-like, partial
[Cucumis sativus]
Length = 318
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 108/229 (47%), Gaps = 31/229 (13%)
Query: 63 ASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQ 121
AE GE + +DW +WYP+ D+ P G TV +V++ D N + +
Sbjct: 68 VDAESEPGEER---FDWYAQWYPIMPICDLDKRVPHGKTVMGIDVVVWWDKNESAWKVFD 124
Query: 122 DRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTY 177
D CPHRLA LSEG++ GRL+C+YHGW F G G C IPQ P D + ACV +
Sbjct: 125 DLCPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVF 184
Query: 178 EVKESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSI 227
V+W W PN D K P+ P F + + +LPY + I
Sbjct: 185 XSIVQNDVLWFW------PNSDPQYKDIMEKKKPPYIPELDDPSFTKLISNRDLPYGYEI 238
Query: 228 LLENLMDPAHIPISH-------DRTDWTAKREDAQPLGFEVTERTDRGF 269
L ENLMDPAH+P +H + A RE +P+ V + GF
Sbjct: 239 LTENLMDPAHVPYAHYGIMGRLPKNREKADREGGKPIDIVVKDFNINGF 287
>gi|302834209|ref|XP_002948667.1| hypothetical protein VOLCADRAFT_89014 [Volvox carteri f.
nagariensis]
gi|300265858|gb|EFJ50047.1| hypothetical protein VOLCADRAFT_89014 [Volvox carteri f.
nagariensis]
Length = 664
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 193/491 (39%), Gaps = 110/491 (22%)
Query: 76 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQ 135
D+ WT W+PL + D P +T+ +V+++D G R ++DRCPHRLA LSEG+
Sbjct: 92 DFVWTRHWWPLIPVDYLKPDRPNPVTLLGITMVVWRDAGGRWRVFRDRCPHRLAPLSEGR 151
Query: 136 L-IDGRLECLYHGWQFEGEGKCVKIPQ-----LPADAKIPRSACVRTYEVKESQGVVWVW 189
+ DG L C YHGW+F+G G C +IPQ A A R +C Y + ++WVW
Sbjct: 152 VESDGSLSCAYHGWRFDGSGACRRIPQAVDAASEAAACSSRRSCATAYPARVEFNMLWVW 211
Query: 190 MSQKTPPNPD--------KLPWFENFAR---PGFQDVS-TIHELPYDHSILLENLMDPAH 237
+PD +L + R PG + S + +LPY + ILLENL DP+H
Sbjct: 212 PDA----SPDAEAAAAATELVVSNDLRRRDNPGGTNFSWFMRDLPYSYEILLENLTDPSH 267
Query: 238 IPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAP------- 290
+P SH R+ + + ++ A G E P P + R + P
Sbjct: 268 LPFSHHGHSPALARDKGGAMPMKPSQDVTTAAA---GAESPTPPPQWARPDGPDFEFDFR 324
Query: 291 ---------CVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLI-------VRF---- 330
V ++ + + G + P G+S +RF
Sbjct: 325 GNISPDATISVHMPHQVMYTYRLGPQFQIRMELFAVPVAPGRSRFFSFYSRIPIRFSPQK 384
Query: 331 ---GATKRSPLAKLF---PKWYFHQNASKVFEQDMGFLSSQNEVL--------MKETVPT 376
G ++ L+ P H + ++ + D FLS Q+EV+ + TVP
Sbjct: 385 LLTGGVVQAAKYLLYVWDPVVLSHLSTHEILDGDSVFLSVQDEVVQEAEERAAITATVPG 444
Query: 377 KE----------------------------LYLNLRSSDTWVAEYRKWMDKVGHGMPYHF 408
+ LY +D V R+W+++ G P+
Sbjct: 445 GDPVVTAKDAAAAAANGGGAARSASTLLSRLYYMPAQADAAVQAGRRWIEERAGGAPFRA 504
Query: 409 GHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTM-------HAPN------LANRY 455
+ + + A ++G + + G +G + AP+ L +RY
Sbjct: 505 RQQQLLAGRAATI---GAATDISGSAETLTTGGLVGLLAADKVPGEAPDPQRRRHLLSRY 561
Query: 456 FRHVIHCKGCS 466
+H HC CS
Sbjct: 562 EQHTRHCPSCS 572
>gi|307106345|gb|EFN54591.1| hypothetical protein CHLNCDRAFT_58209 [Chlorella variabilis]
Length = 545
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 168/392 (42%), Gaps = 74/392 (18%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLAKLSEGQ 135
+ W E WYPL + P + + +V+++D G +D CPHRLA+LS+G
Sbjct: 65 FSWLECWYPLAPVSFLDAPKPHAMQLLGIDLVVWRDDQTGTWAAARDCCPHRLARLSDGL 124
Query: 136 LIDGRLECLYHGWQFEGEGKCVKIPQLP-ADAKIPRSAC------VRTYEVK-------- 180
++ G L C YHGW+F G+C ++PQ P ADA+ + AC + T+ +K
Sbjct: 125 VLGGSLSCKYHGWEFSTTGECTRLPQAPGADAE--QRACTSARCHLATFPIKARAGLASC 182
Query: 181 ---------------ESQGVVWVWMS---------QKTP----PNPDKLPWFENFARPGF 212
QG+++VW S + TP P D WF G
Sbjct: 183 GPGEPRLESRAPAAHAEQGMLFVWPSDDPATWVAAEATPLPLVPENDDPTWFR-----GA 237
Query: 213 QDVSTIHEL-PYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTD-RGFA 270
D + ++L P D ++ EN DP+H P HDRT +RED+ P+ + + +GF
Sbjct: 238 DDGAWGYQLMPVDFAVAQENPFDPSHAPYLHDRT-LNMRREDSVPMAMHLEGKVGPQGFL 296
Query: 271 GRWGK--EKDEPLPNFLRFEAPCVLQNN-------RELVDSK--TGEKHYFTGLFLCRPT 319
G + +E + +F PC + R+ VD + G + FT P
Sbjct: 297 VSHGGYLKSNESMEGTRQFIPPCTARQGRLHIATPRQWVDYRYQNGTRQLFT--IYTTPA 354
Query: 320 GQGKSMLIVRFGATKRSPLAKL----FPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVP 375
G G S L + T +L P W H + ++D L Q +VL + P
Sbjct: 355 GPGNSHLSFKLVTTPPPAPVRLLWNVLPPWLMHIGGAA--DEDRTILHGQQQVLQSQGWP 412
Query: 376 TKELYLNLRSSDTWVAEYRKWMDKVGHG-MPY 406
Y SDT V +RKW+ + G G +PY
Sbjct: 413 KAPHYFLPTPSDTGVVSFRKWLREFGGGEVPY 444
>gi|302844701|ref|XP_002953890.1| chlorophyll a oxygenase [Volvox carteri f. nagariensis]
gi|300260702|gb|EFJ44919.1| chlorophyll a oxygenase [Volvox carteri f. nagariensis]
Length = 657
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 152/331 (45%), Gaps = 37/331 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP + + D + +F + VL++D G+ C +D C HR LS G++++G++
Sbjct: 315 WYPAEFSAKLGQDTLVPFELFGEPWVLFRDEKGQPACIKDECAHRACPLSLGKVVEGQVV 374
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F G+G C K+P P R+ V E G +WVW P LP
Sbjct: 375 CAYHGWEFNGDGHCTKMPSTPH----CRNVGVSALPCAEKDGFIWVWPGDGLPAQ--TLP 428
Query: 203 WFENFARP--GFQDVSTIH-ELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
+FARP GFQ + I ++P +H +L+ENL+D AH P +H T P+
Sbjct: 429 ---DFARPPEGFQVHAEIMVDVPVEHGLLMENLLDLAHAPFTH-----TTTFARGWPVPD 480
Query: 260 EVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVD--------SKTGEKHYFT 311
V T++ +G W +P P + F+ PC++ + L + + K++
Sbjct: 481 FVKFHTNKLLSGYW-----DPYPIDMAFQPPCMVLSTIGLAQPGKIMRGVTASQCKNHLH 535
Query: 312 GLFLCRPTGQGKSMLIVRFGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQNEVL 369
L +C P+ +G + L+ R + P + P + A +V +D+ + Q + L
Sbjct: 536 QLHVCMPSKKGHTRLLYRM-SLDFLPWMRYVPFIDKVWKNVAGQVLGEDLVLVLGQQDRL 594
Query: 370 MKETVPTKELYLNLRSSDTWVAEYRKWMDKV 400
++ + N D YR+W + V
Sbjct: 595 LR----GGNTWSNPAPYDKLAVRYRRWRNSV 621
>gi|440790930|gb|ELR12190.1| rieske [2fe2s] domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 499
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 161/400 (40%), Gaps = 71/400 (17%)
Query: 77 YDWTEEWYPLYLTKDVPDDA---------PLGLTVFDQQIVLYKDGNGELRCYQDRCPHR 127
+D WYP+ ++P A P G + IVL++D +G +C QD+C HR
Sbjct: 8 FDMRNHWYPVAFASELPRGAAATGSRPTDPYGFQLLGDPIVLFRDQHGAAQCVQDKCSHR 67
Query: 128 LAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 187
A LS G + DGRLEC +F GKC IP P + + CV Y E +VW
Sbjct: 68 SAPLSVGTVRDGRLEC-----KFGSGGKCESIPSEPT-TRPGKPFCVYAYPTTEVYDLVW 121
Query: 188 VWMSQKTPPNPDKLP--WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
VW + +P F+ + + + + +H + +EN++DP+H+P +HD T
Sbjct: 122 VWPGDPEKASEQHIPHHLFKEYRDKSWGKDTVTRDFDIEHGLFIENILDPSHLPFTHDGT 181
Query: 246 DWTAKREDAQPLGFEV-----------------TERTD----------RGFAGR-----W 273
+KR A + E+ +TD GF G W
Sbjct: 182 --LSKRAKADEMKVEMLFDNVFGQAPAPRSSADDHQTDAHSHFTLGLPEGFYGMQAQAVW 239
Query: 274 GKEKDEPLPNFLRFEAPCVLQNNRELVDSK---TGEKHYFTGLFLCRPTGQGK------- 323
+ P F F+ PCV++ + + +K G L C P +
Sbjct: 240 PADASRPAQRFT-FQTPCVVRLDLQTSTTKKRPDGSYPTMIQLHFCVPVSPTRFRVNTIF 298
Query: 324 -SMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLN 382
+F A+ PL +WY A K+ +QD+ L+ Q L+ P +
Sbjct: 299 FRNFATKFTASGGFPLGSHLNRWY----ADKIMDQDVELLTGQMVNLLNAAKP----WNT 350
Query: 383 LRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVV 422
+ +D A YR+W D+ P+ G ++P + ++
Sbjct: 351 VVRADKIAARYRRWRDQAELTNPWFCGFHQSAVPDIEDLI 390
>gi|4914457|emb|CAB43696.1| putative protein [Arabidopsis thaliana]
gi|7269415|emb|CAB81375.1| putative protein [Arabidopsis thaliana]
Length = 548
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 198/503 (39%), Gaps = 114/503 (22%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLAKLSEGQ 135
+DW WYP+ D+ P G V +V++ D N + + D CPHRLA LS+G+
Sbjct: 79 FDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGR 138
Query: 136 LID-GRLECLYHGWQFEGEGKCVKIPQLPADA---------KIP---------------- 169
+ GRL+C+YHGW F G G C IPQ P D K+
Sbjct: 139 IDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPHMVYMEHKVKVFGCINDYFGNANQVH 198
Query: 170 --RSACVRTYEVKESQGVVWVWMSQ----KTPPNPDKLPWFENFARPGFQDVSTIHELPY 223
+ ACV Y ++W W + K +K P+ P F + ++PY
Sbjct: 199 TFKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPY 258
Query: 224 DHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGR--WGKEKDEPL 281
+ + + + + ++ D RE +PL V + ++GF + WG
Sbjct: 259 GYLLAFTSFQ--LCVILLAEKID----REGGKPLEINVKKLDNKGFFSKQEWG------- 305
Query: 282 PNFLRFEAPCVLQNNRELVDSKTGE-------------KHYFTGLFLCRPTGQGKSMLIV 328
+ F APCV +++ + + + E K + +F+C P G+S LI
Sbjct: 306 --YSNFIAPCVYRSSTDPLPEQEHEYPAPAASDKAALSKRRLSLIFICIPVSPGRSRLIW 363
Query: 329 RFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKET---------VPTKEL 379
F + K+ P+W FH + + + D+ L + +++ +PTK
Sbjct: 364 TFPRNFGVFIDKIVPRWVFHIGQNTILDSDLHLLHVEERKILERGPENWQKACFIPTK-- 421
Query: 380 YLNLRSSDTWVAEYRKWMDKVGHG-MPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSP 438
SD V +R+W +K + + LP P +
Sbjct: 422 ------SDANVVTFRRWFNKYSEARVDWRGKFDPFLLPPTPPREQ--------------- 460
Query: 439 AKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVV--AAALTVLAILASGR 496
L +RY+ HV +C C K + N+L V+ A++ ++ ++A +
Sbjct: 461 ------------LFDRYWSHVENCSSCKKAHK----YLNALEVILQIASVAMIGVMAVLK 504
Query: 497 QWKAFCLASASLCLAGVYACSTA 519
Q +A ++ +A V + + +
Sbjct: 505 QTTMSNVARIAVLVAAVLSFAAS 527
>gi|255080538|ref|XP_002503849.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
gi|226519116|gb|ACO65107.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
Length = 668
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 174/401 (43%), Gaps = 74/401 (18%)
Query: 32 LNKTPKSRKCHAVTDRSSTSTVGDHKVLVGPASAEE---------------RRGERQVAD 76
L TP++R S +T+G ++ ++AE RGE
Sbjct: 35 LASTPRTRSRWTRASASGGTTIGAEEMAKDASAAEPLIGINPDRVPMVEAVNRGETS-GT 93
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
++WT++WYP+ + + P + + IV++KDG G+ ++D+CPHRLA LSEG++
Sbjct: 94 FNWTKQWYPVAVIDLLDTSKPHPTQLLGKDIVVWKDGAGKWNVFEDKCPHRLAPLSEGRV 153
Query: 137 -IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPR-----SACVRTYEVKESQGVVWVW- 189
DG L C YH W+F+G+G C +PQ + + R +C T E+QG+VW W
Sbjct: 154 EDDGTLLCAYHAWRFDGDGACTDMPQASSKEEADRVRANPRSCAFTRPCMEAQGLVWAWG 213
Query: 190 --------MSQKTPP--NPDKLPWFENFARP--GFQDVSTIHELPYDHSILLENLMDPAH 237
++ TPP P+ +N P G+++ + ++PY + EN +DPAH
Sbjct: 214 EGGKEAELEARMTPPLLVPEIEGVGKNGEAPGGGYRNHWQVRDMPYGWAAFFENAIDPAH 273
Query: 238 IPISHDRTDWTAKREDAQPLGFE-VTERTDRGFAGRWGKEKDEPLPNF-----------L 285
+SH R D P GF V ER AG + D +P F
Sbjct: 274 AVVSHHTL--VGSRYD-DPAGFNCVVERPMTAEAG-FRCAIDPAVPPFNTIGKYDAETSY 329
Query: 286 RFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPT---------------GQGKSMLIVRF 330
F+ PC+L+ +D + E + T + C PT G+G+ + R+
Sbjct: 330 DFQPPCLLK-----IDWRHEEARFLTSHY-CVPTRPGWCRHFVATVCQRGEGEKVRQHRW 383
Query: 331 GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMK 371
K + P W H QDM L Q +++ +
Sbjct: 384 --FKLNLFTLTSPAWMTHVLGPTFLHQDMVLLHQQEKIIAQ 422
>gi|416409232|ref|ZP_11688442.1| Pheophorbide a oxygenase, partial [Crocosphaera watsonii WH 0003]
gi|357260669|gb|EHJ10049.1| Pheophorbide a oxygenase, partial [Crocosphaera watsonii WH 0003]
Length = 226
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 11/227 (4%)
Query: 52 TVGDHKVLVGPASAEERRGERQVADY-DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLY 110
T+ ++K + P G DY DW E WYP++ +D+ P T+ ++ IV++
Sbjct: 3 TINNNKTTITPEKTSIIGGSD--PDYFDWQEVWYPVHYVEDLDKTRPTAFTLLEKNIVIW 60
Query: 111 -KDGNGELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKI 168
++ N + ++D+CPHRLA LSEG++ + G LEC YHGW F G+G C IPQ K
Sbjct: 61 WEEKNNQWSVFEDQCPHRLAPLSEGRINESGCLECPYHGWAFSGQGNCEIIPQQHPTGKA 120
Query: 169 PRS--ACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDV--STIHELPYD 224
+S A V+T + QG+++V+ + +P + + V +T +LPYD
Sbjct: 121 EKSLRASVKTLPTQVRQGLLFVYAGKPENAEITPIPLVDVLEEDSDEWVCLNTFRDLPYD 180
Query: 225 HSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAG 271
L+EN++D +HIP +H ++ R + P+ EV E GF G
Sbjct: 181 ALTLMENVLDSSHIPYTHHKS--VGNRANVSPVELEVIESGKWGFKG 225
>gi|145355088|ref|XP_001421803.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582041|gb|ABP00097.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 510
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 131/477 (27%), Positives = 194/477 (40%), Gaps = 78/477 (16%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLAKLSEGQ 135
+DW+ WYPL + + P L V +++V Y D E R +D CPHR A LS G
Sbjct: 42 FDWSSAWYPLRPVSFLDANEPNELRVLGKKLVAYLDPTCKEWRVLEDSCPHRRAPLSLGY 101
Query: 136 LI-DGRLECLYHGWQFEG-EGKCVKIPQLPADA------KIPRSACVRTYEVKESQGVVW 187
+ DG L C YHGW F+G +G CV IP +A PRS C +Y + G++W
Sbjct: 102 VQKDGTLACRYHGWAFDGKDGSCVSIPMSVDEAAEKTACASPRS-CATSYPSRVEDGILW 160
Query: 188 VWMSQKTPPNPDKL------PWFENFARPG-FQDVSTIHELPYDHSILLENLMDPAHIPI 240
VW + D L P + AR G + ELP ++ LEN DP+H
Sbjct: 161 VWPTA----GADGLLASAGAPCATSLAREGTLPGEWGMVELPVGYAPALENQFDPSHAEW 216
Query: 241 SHDRTDWTAKREDAQPLGF---------EVTERTDRGFAGRWGKEKDEPLPNFLR-FEAP 290
H R D + ++ GF E T + D G K + R F AP
Sbjct: 217 LHARYDAEGQLDERANAGFVAMTEFSVREGTMQKDGFVVEHGGYNKSNVGVSASRVFTAP 276
Query: 291 CVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLA-----KLFPKW 345
C + E +D+K K Y + L PT G++++ +F A + S + KL
Sbjct: 277 C--SSRSEYLDAKG--KKYLSAAILYAPTEPGRTLMFTKFQAHQASAVQGAGARKLVRVG 332
Query: 346 YFH-----QNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKV 400
H +A + +QD+ + + + P K+ Y +D V+ +R WMDK
Sbjct: 333 LSHGTPPGSSAYNLGDQDILAMHGVEVEMELQNKPWKQSYYLPTPADAGVSAFRNWMDK- 391
Query: 401 GHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVI 460
H+ + P VV+ A S K + +RY RH
Sbjct: 392 ---------HAGGKVAWAPGVVDDA-----------SKVKSEAEQL------DRYHRHTK 425
Query: 461 HCKGCSSVIKAFSTWKNSLSVVAAALTVLA----ILASGRQWKAFCLASASLCLAGV 513
HC C + + + VAA+ +LA + +G + A + CLAG
Sbjct: 426 HCVACKTALSELGVLEE--RCVAASKYLLAGGLFLAVTGAAFDQEAPAIIATCLAGA 480
>gi|384048602|ref|YP_005496619.1| Ring-hydroxylating dioxygenase, large terminal subunit [Bacillus
megaterium WSH-002]
gi|345446293|gb|AEN91310.1| Ring-hydroxylating dioxygenase, large terminal subunit [Bacillus
megaterium WSH-002]
Length = 337
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 161/346 (46%), Gaps = 42/346 (12%)
Query: 72 RQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKL 131
+ + D +EW P + D+ D PL +T+ ++++ L++ N ++ ++D C HR A L
Sbjct: 2 QMIKDLVLAKEWLPAAYSHDLTDQ-PLQVTILEERVALFRTTNA-IKAFKDLCIHRGAAL 59
Query: 132 SEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMS 191
S G+++D + C YHGW+++ G CVKIPQ P IP A + Y+ E G++WV M+
Sbjct: 60 SLGKVVDDCIVCPYHGWKYDEAGACVKIPQQPPGRAIPSKAKAQVYDCVEKYGIIWVKMN 119
Query: 192 QKTPPNPDKLPWFENFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRT----- 245
+ P LP ++ + PGF+ V + H L ++EN +D +H+ H+ +
Sbjct: 120 SEASDTP--LPQYDEYLNPGFKTVCANPHTLQAAAPRVVENFLDVSHLAFVHEGSLGHSD 177
Query: 246 -----DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEA--PCVLQNNRE 298
D+ +D + + E+ D G + + FE P V + +
Sbjct: 178 YAEIPDYKVHWKDNRYVSDEIAVYADADGTGNFAT-------IYYTFEILRPTVARLKK- 229
Query: 299 LVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQD 358
V+ +TGE F+ LF P + KS + F R+ + P YF + EQD
Sbjct: 230 -VNYETGE--IFSMLFAVLPEEERKSTV---FALVSRN-YSFDEPDQYFRDFQQLIIEQD 282
Query: 359 MGFLSSQNEVLMKETVPTK---ELYLNLRSSDTWVAEYRKWMDKVG 401
+ SQ E +P EL+LN D YR+W+ +G
Sbjct: 283 TSIVESQK----PEELPLDLQAELHLN---PDRLSIAYRRWLGDLG 321
>gi|159478286|ref|XP_001697235.1| pheophorbide a oxygenase [Chlamydomonas reinhardtii]
gi|158274709|gb|EDP00490.1| pheophorbide a oxygenase [Chlamydomonas reinhardtii]
Length = 526
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 103/201 (51%), Gaps = 21/201 (10%)
Query: 60 VGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRC 119
V P S+ + Q Y W +WYP+ +D+ P + + L+KD G+ R
Sbjct: 8 VVPTSSTSADLDSQDGKYQWHSQWYPVGKVEDLDPRRPHATHLLGIPLALWKDAQGQWRA 67
Query: 120 YQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAK------IPRSA 172
+DRC HRLA LSEG++ DG L+C YHGWQF+G G C IPQL D K R +
Sbjct: 68 VEDRCSHRLAPLSEGRVEKDGTLQCAYHGWQFDGRGACTHIPQLRNDEKAQQVACASRRS 127
Query: 173 CVRTYEVKESQGVVWV--------WMSQKTPPNPDKLPWFEN--FARPGFQDVS-TIHEL 221
CVR Y + + G++WV W TPP+ +L N A P DV + ++
Sbjct: 128 CVRAYPTQVAHGLLWVLPDSSAAGWEKAATPPSTAQLLGGANDDGADP---DVGWYVRDM 184
Query: 222 PYDHSILLENLMDPAHIPISH 242
P L+EN+ DP+H+P +H
Sbjct: 185 PLRFDTLVENIADPSHVPFAH 205
>gi|145351277|ref|XP_001420009.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580242|gb|ABO98302.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 668
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 162/379 (42%), Gaps = 67/379 (17%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
Y WT++WYP+ + + + P T+ +V++K+G+G ++D+CPHRLA LSEG++
Sbjct: 94 YSWTKQWYPVAVVDVLDETKPHPTTLLGIDLVVWKNGDGSWSVFEDKCPHRLAPLSEGRV 153
Query: 137 -IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPR-SACVRTYEVKE----SQGVVWVW- 189
DG L C YH W+F+G+GKC +PQ + + R A VR+ K +QG+VW W
Sbjct: 154 ESDGTLLCAYHAWRFDGDGKCTSMPQASSAEEEERIKANVRSCAFKRPSMVAQGLVWAWG 213
Query: 190 -------MSQKTPPNPDKLPWFENFARP------GFQDVSTIHELPYDHSILLENLMDPA 236
M P P +P E + GF++ + +LPY + EN +DPA
Sbjct: 214 EGGKDAEMEAAMTP-PLFVPEIEGIGKSGRASCGGFRNHWQVRDLPYGWNAFFENAIDPA 272
Query: 237 HIPISHDRTDWTAKREDAQPLGFE-VTER--TDRGFAGRWGKEKDEPLPNF--------- 284
H +SH R D P GF+ V ER TD AG + D +P F
Sbjct: 273 HAVVSHHTL--VGSRYD-DPAGFQCVVERPVTD---AGGFRCAIDPAVPPFNSIGKYDAE 326
Query: 285 --LRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLA--- 339
F+ P +L+ + + HY C PT G V A +R +
Sbjct: 327 TSYDFQPPALLKIDWRHEGGRFLTSHY------CVPTRPGWCRHFVVTIAQRRPEMGNKI 380
Query: 340 --------KLF----PKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT-----KELYLN 382
LF P W H QDM L Q +++ + K+
Sbjct: 381 REHRWFKLNLFTLTSPAWLTHVLGPTFLHQDMVLLHQQEKIIAQGDGQAMAQKWKDQVFT 440
Query: 383 LRSSDTWVAEYRKWMDKVG 401
++D + KW +K G
Sbjct: 441 PSTADKMTIFFYKWFEKNG 459
>gi|159479812|ref|XP_001697980.1| rieske iron-sulfur cluster 55 kDa protein of chloroplast inner
membrane translocon [Chlamydomonas reinhardtii]
gi|158273779|gb|EDO99565.1| rieske iron-sulfur cluster 55 kDa protein of chloroplast inner
membrane translocon [Chlamydomonas reinhardtii]
Length = 563
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 163/414 (39%), Gaps = 72/414 (17%)
Query: 45 TDRSSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFD 104
T ++T+TV V P++ E+ V W + W+P+ + + + P T+
Sbjct: 55 TSAAATATVVPPARDVQPSATPSAESEQFV----WAQNWFPVAVVECLDSSRPHPFTLMG 110
Query: 105 QQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLP 163
+ +VL++DG G R ++D CPHRL LSEG++ DG L C YH W+F+G GKC IPQ+
Sbjct: 111 KDLVLWRDGGGTWRAFEDACPHRLVPLSEGRIEKDGTLLCAYHAWRFDGGGKCTSIPQVE 170
Query: 164 ADAKI---------PRSACVRTYEVKESQGVVWVWMSQKTP-------PNP--------- 198
PR CV +G M P P P
Sbjct: 171 GKEAAERAFSSPSKPRRVCVCVCAYVCVKGREAYKMRPALPLRACSFLPAPLPLTVFELP 230
Query: 199 ----DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDA 254
LPWF F+D LPY + +EN+ DPAH+ +SH D
Sbjct: 231 SSRVQPLPWF-------FRD------LPYSYDFFVENVTDPAHVNVSHHNVAGNRYAPDQ 277
Query: 255 QPLGFEVTERTDRGFAGRWGKEKDEPLPNF----LRFEAPCVLQNNRELVDSKTGEKHYF 310
F V + AG + P+ N F P +++ E D
Sbjct: 278 Y---FSVDPLREVSAAGGFKYASRAPVTNVSTSSTEFLPPSLVKIKVEYSDGAA----LI 330
Query: 311 TGLFLCRPTGQGKSMLIVRFGATKRSPLAKL----------FPKWYFHQNASKVFEQDMG 360
L+ C PT G + + R K +P K+ PKW H AS QD
Sbjct: 331 LALYSC-PTTPGHNRHVGRQILIK-TPEGKMPRGLAFFALPMPKWLGHATASVFLHQDQV 388
Query: 361 FLSSQNEVLMKETVPTKEL-YLNLRSSDTWVAEYRKWMDK-VGHGMPYHFGHST 412
FL Q ++ + + Y SD +R W+ + G G+PY G +T
Sbjct: 389 FLHQQERIVAGRSAASHTAKYFMPAPSDNMTVAFRTWLGQHAGGGVPYAGGRTT 442
>gi|295702951|ref|YP_003596026.1| Rieske (2Fe-2S) domain-containing protein [Bacillus megaterium DSM
319]
gi|294800610|gb|ADF37676.1| Rieske (2Fe-2S) domain protein [Bacillus megaterium DSM 319]
Length = 335
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 160/344 (46%), Gaps = 42/344 (12%)
Query: 74 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSE 133
+ D +EW P + DV D PL +T+ ++++VL++ N ++ ++D C HR A LS
Sbjct: 2 IKDLVLAKEWLPAAYSHDVTDQ-PLQVTILEERVVLFRTTNA-IKAFKDLCIHRGAALSL 59
Query: 134 GQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK 193
G+++D + C YHGW+++ G CVKIPQ P IP A + Y+ E G++WV M+ +
Sbjct: 60 GKVVDDCIVCPYHGWKYDDAGACVKIPQQPPGRAIPSKAKAQVYDCVEKYGIIWVKMNSE 119
Query: 194 TPPNPDKLPWFENFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRT------- 245
P LP ++ GF+ V ++ H L ++EN +D +H+ H+ +
Sbjct: 120 AGDTP--LPLYDEHLNSGFKTVCASPHTLQAAAPRVVENFLDVSHLAFVHEGSLGHSDYA 177
Query: 246 ---DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEA--PCVLQNNRELV 300
D+ +D + + E+ D G + + FE P V + + V
Sbjct: 178 EIPDYKVHWKDNRYVSDEIAVYADADGTGNFAT-------IYYTFEILRPTVARLKK--V 228
Query: 301 DSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMG 360
+ +TGE F+ LF P + KS + F R+ + P YF + EQD
Sbjct: 229 NHETGE--IFSMLFAVLPEEERKSTV---FALVSRN-YSFDAPDQYFRDFQQLIIEQDTS 282
Query: 361 FLSSQNEVLMKETVPTK---ELYLNLRSSDTWVAEYRKWMDKVG 401
+ SQ E +P EL+LN D YR+W+ +G
Sbjct: 283 IVESQK----PEELPLDLQAELHLN---PDRLSIAYRRWLGDLG 319
>gi|302817640|ref|XP_002990495.1| hypothetical protein SELMODRAFT_131716 [Selaginella moellendorffii]
gi|300141663|gb|EFJ08372.1| hypothetical protein SELMODRAFT_131716 [Selaginella moellendorffii]
Length = 491
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 154/347 (44%), Gaps = 51/347 (14%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + + + PL + +F++ VL++ +G C D C HR LS G++ DG L+
Sbjct: 153 WYPVAFSACLDSEKPLAIEIFEKNWVLFRGKDGRAGCIHDACAHRACPLSLGKVNDGCLQ 212
Query: 143 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 199
C YHGW++ G C K+P K+ C+ E G+VW+W TP + P
Sbjct: 213 CPYHGWEYATSGSCEKMPSTRFVPTKVKSMPCI------EKDGLVWIWPGSATPESDIPS 266
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT---DWTAKREDAQP 256
LP ENF I +L +H +L+ENL+D AH P +H T W+
Sbjct: 267 LLP-PENFT----LHAEIILDLEVEHGLLMENLLDLAHAPFTHTTTFAKGWSV----PSS 317
Query: 257 LGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE-------KHY 309
+ F+ T RG+ W +P P + F PC++ + L E K++
Sbjct: 318 VKFKTPVETLRGY---W-----DPYPIDMEFRRPCMVLSTIGLAKPGKLEGSDTQSCKNH 369
Query: 310 FTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQNE 367
L +C P+ +GK+ L+ R + +P K P + + A KV ++D+ + Q E
Sbjct: 370 LHQLHVCIPSTRGKTRLLYRM-SLDFAPWLKYVPFIQTLWVHLARKVLDEDLRLVEGQQE 428
Query: 368 VLMKE----TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGH 410
+++ +P L +R YRKW H H H
Sbjct: 429 RMVRGANVWNLPVPYDKLGVR--------YRKWRVSCEHDHADHHQH 467
>gi|159463890|ref|XP_001690175.1| chlorophyll a oxygenase [Chlamydomonas reinhardtii]
gi|115311321|sp|Q9ZWM5.2|CAO_CHLRE RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Flags: Precursor
gi|61742126|gb|AAX54904.1| chloroplast chlorophyllide a oxygenase precursor [Chlamydomonas
reinhardtii]
gi|158284163|gb|EDP09913.1| chlorophyll a oxygenase [Chlamydomonas reinhardtii]
Length = 645
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 153/338 (45%), Gaps = 51/338 (15%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP + +P D + +F + V+++D G+ C +D C HR LS G++++G++
Sbjct: 305 WYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQPSCIRDECAHRGCPLSLGKVVEGQVM 364
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F G+G C K+P P R+ V E G +WVW P + LP
Sbjct: 365 CPYHGWEFNGDGACTKMPSTP----FCRNVGVAALPCAEKDGFIWVWPGDGLP--AETLP 418
Query: 203 WFENFARP--GFQDVSTIH-ELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
+FA+P GF + I ++P +H +L+ENL+D AH P +H T+ P+
Sbjct: 419 ---DFAQPPEGFLIHAEIMVDVPVEHGLLIENLLDLAHAPFTH-----TSTFARGWPVPD 470
Query: 260 EVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCV------LQNNRELVDSKTGE--KHYFT 311
V ++ +G W +P P + F+ PC+ L +++ T K++
Sbjct: 471 FVKFHANKALSGFW-----DPYPIDMAFQPPCMTLSTIGLAQPGKIMRGVTASQCKNHLH 525
Query: 312 GLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH---------QNASKVFEQDMGFL 362
L +C P+ +G + L+ R F W H Q A++V +D+ +
Sbjct: 526 QLHVCMPSKKGHTRLLYRMSLD--------FLPWMRHVPFIDRIWKQVAAQVLGEDLVLV 577
Query: 363 SSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKV 400
Q + +++ + N D YR+W + V
Sbjct: 578 LGQQDRMLR----GGSNWSNPAPYDKLAVRYRRWRNGV 611
>gi|168057848|ref|XP_001780924.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667637|gb|EDQ54262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 507
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 185/419 (44%), Gaps = 61/419 (14%)
Query: 5 LRSLFFSPLLKIPSPKL--TPPTTNVIISLNKTPKSRKCHAVTDRSSTSTVGDHKVL--V 60
+ SLF + LL+ + T P + L T ++ + R++TS +V +
Sbjct: 121 MESLFNTKLLQNQGRERGSTVPKATSALQLALTGEAEADLSARPRTNTSRAKSLEVSGPI 180
Query: 61 GPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCY 120
GP A Q+ +Y WYP+ + D+ D + F++ V+++ +G C
Sbjct: 181 GPYPA-------QLKNY-----WYPVAFSADIDDKTMVPFNSFEEAWVIFRGKDGRPGCV 228
Query: 121 QDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEV 179
+D C HR LS G++ +GR++C YHGW++ GKC K+P +AK+ C+
Sbjct: 229 RDSCAHRACPLSLGKVEEGRIQCPYHGWEYNTSGKCEKMPSTRFVNAKLDSLPCI----- 283
Query: 180 KESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIP 239
E G+VW+W +TP LP + T+ ELP +H +L+ENL+D AH P
Sbjct: 284 -EQDGMVWIWPGNETPST--NLPCLNPPSHYTIHAQITM-ELPVEHGLLVENLLDLAHAP 339
Query: 240 ISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL 299
+H T AK D F G W +P P + F+ PC++ + L
Sbjct: 340 FTHTTT--FAKGWDVP--NFVKFRTPIAALQGTW-----DPYPIAMEFKPPCMVLSTIGL 390
Query: 300 VDSKTGEKH---------YFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFP--KWYFH 348
K G+ + + L +C P+ +GK+ L+ R A +P K P K+ +
Sbjct: 391 --EKPGKLNGSDVEACPTHLHQLHVCMPSSKGKTRLLYRM-ALDFAPYLKHVPFIKYLWQ 447
Query: 349 QNASKVFEQDMGFLSSQNEVLMKE----TVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
A+KV +D+ + Q + + + VP L +R YR+W + G
Sbjct: 448 HLANKVLGEDLRLVEGQQDRMERGANVWNVPVAYDKLGVR--------YRRWRIAIESG 498
>gi|290978282|ref|XP_002671865.1| predicted protein [Naegleria gruberi]
gi|284085437|gb|EFC39121.1| predicted protein [Naegleria gruberi]
Length = 563
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 185/386 (47%), Gaps = 61/386 (15%)
Query: 69 RGERQVADYDWTEEWYPLYLTKDVP--DDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPH 126
+ + + + D + WYP+ L+ D+ D P + + + +VLY+ +G++ C D CPH
Sbjct: 163 KEKTNLNNMDMSLFWYPVALSTDIKINDKKPFVVKLLGEPLVLYRTSDGQVTCTLDLCPH 222
Query: 127 RLAKLSEGQL--IDGR--LECLYHGWQFEGEGKCVKIPQLPAD--AKIPRSACVRTYEVK 180
R AKLS G++ +G+ LEC YHGW+FE +G+CV+IP + ++ + ++ ++ +V
Sbjct: 223 RSAKLSTGEITEFEGKRSLECAYHGWRFEKDGQCVRIPSVSSERMKGLCKTIKCQSKQVH 282
Query: 181 ESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVST--------IHELPYDHSILLENL 232
E G++WVW + K + +++P E F + ST ++P ++S++LENL
Sbjct: 283 ECCGMIWVWPNDKVKSDINQIP-IELFREEYLTEDSTKPYIMLEKSRDIPCNYSLVLENL 341
Query: 233 MDPAHIPISHDRT-----------------------DWTAKREDAQPLGFEVTERTDRGF 269
+D AH+ +HD T D + + + + F+ T +D F
Sbjct: 342 LDFAHLDFTHDGTLGKRSRATQVKTQLILSKDTPAQDDSVRSKLPTEMHFDKTIHSD-SF 400
Query: 270 AGRWGKEKDEPLP-------NFLRFEAPCVLQ-NNRELVDSKTGEKH--YFTGLFLCRPT 319
R K + + + N F PC ++ +N + ++ + + +F PT
Sbjct: 401 TYRVTKPEYQKVKGVKREFGNITSFIPPCFVRLDNTDYIEGGDLKNAGPRISQIFCMIPT 460
Query: 320 GQGKSMLIVRFGATKRSPLAKLFPKW-YFH----QNASKVFEQDMGFLSSQNEVLMKETV 374
GQ + +I RF +T P+ K Y + Q+A + +QD+ L +E + K
Sbjct: 461 GQNEHRIIFRFYST--IPVLNYLNKIPYIYSKLLQSADTILDQDLELLFGISENVTKNGA 518
Query: 375 PTKELYLNLRSSDTWVAEYRKWMDKV 400
+++ + ++D + YR W K+
Sbjct: 519 ---KVFSKIVNADAPIKAYRDWEAKM 541
>gi|294497580|ref|YP_003561280.1| Rieske (2Fe-2S) domain-containing protein [Bacillus megaterium QM
B1551]
gi|294347517|gb|ADE67846.1| Rieske (2Fe-2S) domain protein [Bacillus megaterium QM B1551]
Length = 335
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 159/344 (46%), Gaps = 42/344 (12%)
Query: 74 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSE 133
+ D +EW P + D+ D PL +T+ ++++VL++ N ++ ++D C HR A LS
Sbjct: 2 IKDLVLAKEWLPAAYSHDLTDQ-PLQVTILEERVVLFRTTNA-IKAFKDLCIHRGAALSL 59
Query: 134 GQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK 193
G+++D + C YHGW+++ G CVKIPQ P IP A + Y E G++WV M+ +
Sbjct: 60 GKVVDDCIVCPYHGWKYDDAGACVKIPQQPPGRAIPSKAKAQVYACVEKYGIIWVKMNSE 119
Query: 194 TPPNPDKLPWFENFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRT------- 245
P LP+++ GF+ V + H L ++EN +D +H+ H+ +
Sbjct: 120 AGDTP--LPFYDEHLNSGFKTVCANPHTLQAAAPRVVENFLDVSHLAFVHEGSLGHSDYA 177
Query: 246 ---DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEA--PCVLQNNRELV 300
D+ +D + + E+ D G + + FE P V + + V
Sbjct: 178 EIPDYKVHWKDNRYVSDEIAVYADADGTGNFAT-------IYYTFEILRPTVARLKK--V 228
Query: 301 DSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMG 360
+ +TGE F+ LF P + KS + F R+ + P YF + EQD
Sbjct: 229 NYETGE--IFSMLFAVLPEEERKSTV---FALVSRN-YSFDAPDQYFRDFQQLIIEQDTS 282
Query: 361 FLSSQNEVLMKETVPTK---ELYLNLRSSDTWVAEYRKWMDKVG 401
+ SQ E +P EL+LN D YR+W+ +G
Sbjct: 283 IVESQK----PEELPLDLQAELHLN---PDRLSIAYRRWLGDLG 319
>gi|218193945|gb|EEC76372.1| hypothetical protein OsI_13975 [Oryza sativa Indica Group]
gi|222626004|gb|EEE60136.1| hypothetical protein OsJ_13023 [Oryza sativa Japonica Group]
Length = 341
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 122/257 (47%), Gaps = 41/257 (15%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG--ELRCYQDRCPHR 127
G + ++W ++WYP+ D+ P G V ++V + DG G E R D CPHR
Sbjct: 78 GGGEEGRFEWLDQWYPVAPVCDLDPRKPHGKMVMGLRVVAWFDGGGGGEWRVVDDACPHR 137
Query: 128 LAKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPA---DAKIPRSACVRTYEVKESQ 183
LA LSEG++ GRL+C YHGW F+G G C IPQ PA ACV +Y
Sbjct: 138 LAPLSEGRVDGKGRLQCAYHGWCFDGHGSCQFIPQAPALGPPVHKNSKACVASYPSVVQN 197
Query: 184 GVVWVW----------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLM 233
++W + + +K PP +F + P F V + +L Y + +L+ENLM
Sbjct: 198 NILWFYPRSEPEYKEILQRKRPP------YFPDLDDPSFNTVFGVRDLFYGYDVLVENLM 251
Query: 234 DPAHIPISHDRTDWTAKREDA----------------QPLGFEVTERTDRG-FAGRWGKE 276
DPAH+P +H +ED Q G+ V RT++ G +
Sbjct: 252 DPAHVPYAHKGLMPIQNKEDPGRYCSTVHLLSTVESDQEGGYPVKIRTEQAKIDGFLSVQ 311
Query: 277 KDEPLPNFLRFEAPCVL 293
+D+ +++F+APC L
Sbjct: 312 EDDVC--YMKFDAPCTL 326
>gi|384249917|gb|EIE23397.1| hypothetical protein COCSUDRAFT_47272 [Coccomyxa subellipsoidea
C-169]
Length = 557
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 196/504 (38%), Gaps = 98/504 (19%)
Query: 48 SSTSTVGDHK-VLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQ 106
+++ T+ H +L P E + + + W +WYPL +D+ P + + ++
Sbjct: 54 TASRTLSRHAAILDAPPKTEPSQEAEKEGTFVWARQWYPLAFVEDLDPGRPHAMELLGKR 113
Query: 107 IVLYKDGNGE-LRCYQDRCPHRLAKLSEGQL--IDGRLECLYHGWQFEGEGKCVKIPQLP 163
+V++ D + ++DRCPHRLA LSEG++ DG L C YHGW+F G+G C +IPQ
Sbjct: 114 LVIWYDSRQQKWTAFEDRCPHRLAPLSEGRIEPSDGTLMCSYHGWRFRGDGACTRIPQA- 172
Query: 164 ADAKIPRSA------CVRTYEVKESQGVVWVW---------MSQKTPP------NPDKLP 202
DA+ +A C + + QG + VW + + PP +PD
Sbjct: 173 LDARAEDAACSSGRSCAAVHPTQVRQGFLHVWGEAGAEAAEEAARRPPVLIPELDPDAAD 232
Query: 203 WFENFARPGFQDVST-IHELPYDHSILLENLMDPAHIPISHD-----RTDWTAKREDAQP 256
P I +LPY + L+ENL+DPAH+ +H+ R TA + P
Sbjct: 233 AVMRDGSPTLDSGKRYIRDLPYSYDFLVENLIDPAHVNYAHNGVIGSRNTPTAGYYEISP 292
Query: 257 L-----GFE-VTERTDRG--------FAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDS 302
FE TE G F GR K ++F AP ++ R
Sbjct: 293 TPLPDRTFEFATEHPSDGMSMDIVSKFMGRRTAYK-------IQFVAPAIV---RYYFPG 342
Query: 303 KTGEKHYFTGLFLCRPTGQGKSMLIVRF-----GATKRSPLAKLFPKWYFHQNASKVFEQ 357
GE + PT G+ + F GA+KR P W H + VF+
Sbjct: 343 YFGEVNDAQMWMAAVPTAPGRCRCLWWFFQPSVGASKRLQKVAAQPVWKDHMTRNLVFDG 402
Query: 358 DMGFLSSQNEVLMKETVPT----KELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTI 413
D FL + V + K Y +D V E+R+W+D G G P I
Sbjct: 403 DNVFLHGADRVAAAAERESGSRWKGSYFMPAQADRMVLEFRRWLDSRGGGGPTPGDPGPI 462
Query: 414 SLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFS 473
+ L +R+ +H HC C + F
Sbjct: 463 LDDR-------------------------------QKLLDRWEQHTKHCPSCLQALGKFQ 491
Query: 474 T--WKNSLSVVAAALTVLAILASG 495
W + A+ L + +LASG
Sbjct: 492 ALRWAAVAAGAASLLVTVGVLASG 515
>gi|218437959|ref|YP_002376288.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7424]
gi|218170687|gb|ACK69420.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 468
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 187/453 (41%), Gaps = 77/453 (16%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
+ + WT++WYP+ + +P +T+ +++V++++ + D CPH+L +LS+G
Sbjct: 3 SQFSWTKQWYPVMPLSYLDASSPTPITLLGKKLVIWRNERQKWVVMDDYCPHKLMQLSKG 62
Query: 135 QLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVVW 187
+ +G L C +HGW F GEG+C IP L D + ++AC VR Y + QG++W
Sbjct: 63 TITEEGHLMCRHHGWCFNGEGQCTHIPML-GDTQAQQTACNSLKSQVRIYPTQVLQGLLW 121
Query: 188 VWMSQKTPPNPDKLPWFENFARPGFQDVSTIHE--------------LPYDHSILLENLM 233
VW PD+ P F + +TI E +P +++ +E+
Sbjct: 122 VW--------PDESP--TAFEESSTKQPATIPECDPDVCATDWHMSDVPVGYTVSVESTF 171
Query: 234 DPAHIPISHDRTDWTAKREDAQPLGFEVTER--TDRGFAGRWGKEK--DEPLPNFLRFEA 289
DP+H H+ + + F V + + GF + G K ++ + +F
Sbjct: 172 DPSHANFLHEGLGGFSPQTAVPITEFNVVGQISAEDGFTLKHGGYKLDNQDMDATRKFSP 231
Query: 290 PCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRF----GATKRSPLAKLFPK- 344
PC N + G+ F F+ PT G I +F + + + KL PK
Sbjct: 232 PCC---NTTVYRYTNGKSLIFQLYFI--PTKPGYCRYIGKFITEGNSQTTNSIFKLLPKD 286
Query: 345 ---WYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVG 401
H K+ +QD+ + SQ + P ++ Y +D + +RKW+D+
Sbjct: 287 LRTGLMHLFTYKLGDQDLTAMHSQETIESSLNQPWQKAYFMPSPADVGIVTFRKWLDEFA 346
Query: 402 HGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIH 461
G P G+ + + ++ L +R+ RH H
Sbjct: 347 GGQPAWQGN----------------------------LQKSHKSLSDEQLYDRWHRHTKH 378
Query: 462 CKGCSSVIKAFSTWKNSLSVVAAALTVLAILAS 494
C C + + + + ++ L +L ++ S
Sbjct: 379 CPSCRNSVIFIEKVQKACNIATIGLVLLTLVFS 411
>gi|428169222|gb|EKX38158.1| hypothetical protein GUITHDRAFT_50255, partial [Guillardia theta
CCMP2712]
Length = 366
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 170/363 (46%), Gaps = 50/363 (13%)
Query: 82 EWYPLYLTKDVPDDAP-LGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL-IDG 139
+WYP+ KD+ D P + + +V + +G C+ D CPHRLA LSEG++ +G
Sbjct: 4 DWYPVSPAKDLKKDQPNQVVLLGLDLVVWWHQPSGTWSCFADECPHRLAPLSEGRIDKNG 63
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADA-KIPRSACVRTYEVKESQGVVWVW----MSQKT 194
L+C YHGW+F +G C +IPQ D K + AC +Y G++W++ +
Sbjct: 64 NLQCAYHGWEFSEKGSCERIPQDSMDTMKCDKKACATSYP-----GLLWIFPDTDRNLAM 118
Query: 195 PPNPDKLPWFENFARPGFQDVST--IHELPYDHSILLENLMDPAHIPISHDRTDWTAKRE 252
+P +P F++ P F D + + ++PY L+ENL+DP+H+P +H R+
Sbjct: 119 SKSPKIIPQFDD---PAFVDPTNFFMRDVPYGWDTLIENLVDPSHVPFAHHGL--IEARD 173
Query: 253 DAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFL---RFEAPCVLQNNRELVDSKTGEKHY 309
+P+ V E + GF G + + +F PC++ S +
Sbjct: 174 QGRPINLYV-ESHEAGFEGYDMDQNSTSRRCGIVSSKFRPPCLI--------SDPEKNST 224
Query: 310 FTGL-FLCRPTGQGKSMLIVRFGATKRSP------LAKLFPKWYFHQNASKVFEQDMGFL 362
F GL C PT G S LI RF R P + ++ P+W H + ++V + D FL
Sbjct: 225 FLGLGTYCIPTAPGHSRLITRFPF--RFPNQIVANIVRMQPRWMTHLSQNQVIDSDNVFL 282
Query: 363 S--------SQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTIS 414
S ++ + + + Y ++D V +R+W+ K G G P G ++
Sbjct: 283 SLLESKVLLPRSSLPLLLLIHIAATYYVPAAADRPVLAFRQWLQKQG-GQPAWLGTPSM- 340
Query: 415 LPK 417
LPK
Sbjct: 341 LPK 343
>gi|168050551|ref|XP_001777722.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670942|gb|EDQ57502.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 562
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 146/306 (47%), Gaps = 43/306 (14%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP + D+ D + F++ V+++ +G C +D C HR LS G++ DGR++
Sbjct: 246 WYPAAFSADIDDKTMVPFDSFEEAWVIFRGKDGRPGCVRDSCAHRACPLSLGKVEDGRIQ 305
Query: 143 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW++ GKC K+P +A++ C+ E G+VW+W +TP L
Sbjct: 306 CPYHGWEYNTSGKCEKMPSTRLVNAELDSLPCI------EQDGMVWIWPGNETPST--NL 357
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
P + T+ ELP +H +L+ENL+D AH P +H T AK G+EV
Sbjct: 358 PCLNPPSHYTIHAQITM-ELPVEHGLLVENLLDLAHAPFTHTTT--FAK-------GWEV 407
Query: 262 TE----RTD-RGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH-------- 308
RT +G W +P P + F+ PC++ + L K G+ +
Sbjct: 408 PSFVKFRTPIAALSGTW-----DPYPIAMEFKPPCMVLSTIGL--EKPGKLNGTDVDACP 460
Query: 309 -YFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQ 365
+ L +C P+ +GK+ L+ R A +P K P K+ + A+KV +D+ + Q
Sbjct: 461 THLHQLHVCMPSSKGKTRLLYRM-ALDFAPYLKHVPFIKYLWQHLANKVLGEDLRLVEGQ 519
Query: 366 NEVLMK 371
+ + +
Sbjct: 520 QDRMER 525
>gi|3786324|dbj|BAA33964.1| chlorophyll a oxygenase [Chlamydomonas reinhardtii]
Length = 463
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 151/338 (44%), Gaps = 51/338 (15%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP + +P D + +F + V+++D G+ +D C HR LS G++++G++
Sbjct: 123 WYPAEFSARLPKDTLVPFELFGEPWVMFRDEKGQPSYIRDECAHRGCPLSLGKVVEGQVM 182
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F G+G C K+P P R+ V E G +WVW P + LP
Sbjct: 183 CPYHGWEFNGDGACTKMPSTP----FCRNVGVAALPCAEKDGFIWVWPGDGLP--AETLP 236
Query: 203 WFENFARP--GFQDVSTIH-ELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
+FA+P GF + I ++P +H +L+ENL+D AH P +H T+ P+
Sbjct: 237 ---DFAQPPEGFLIHAEIMVDVPVEHGLLIENLLDLAHAPFTH-----TSTFARGWPVPD 288
Query: 260 EVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVD--------SKTGEKHYFT 311
V ++ +G W +P P + F+ PC+ + L + + K++
Sbjct: 289 FVKFHANKALSGFW-----DPYPIDMAFQPPCMTLSTIGLAQPGKIMRGVTASQCKNHLH 343
Query: 312 GLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFH---------QNASKVFEQDMGFL 362
L +C P+ +G + L+ R F W H Q A++V +D+ +
Sbjct: 344 QLHVCMPSKKGHTRLLYRMSLD--------FLPWMRHVPFIDRIWKQVAAQVLGEDLVLV 395
Query: 363 SSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKV 400
Q + +++ + N D YR+W + V
Sbjct: 396 LGQQDRMLR----GGSNWSNPAPYDKLAVRYRRWRNGV 429
>gi|302804017|ref|XP_002983761.1| hypothetical protein SELMODRAFT_118803 [Selaginella moellendorffii]
gi|300148598|gb|EFJ15257.1| hypothetical protein SELMODRAFT_118803 [Selaginella moellendorffii]
Length = 481
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 169/374 (45%), Gaps = 61/374 (16%)
Query: 43 AVTDR-SSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLT 101
AVT R ++TS+ + GP +R ++ +Y WYP+ + + + PL +
Sbjct: 121 AVTVRKNATSSKSKGLNIAGPV----KRYPAEMKNY-----WYPVAFSACLDSEKPLAIE 171
Query: 102 VFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQ 161
+F++ VL++ +G C D C HR LS G++ DG L+C YHGW++ G C K+P
Sbjct: 172 IFEKNWVLFRGKDGRAGCIHDACAHRACPLSLGKVNDGCLQCPYHGWEYATSGSCEKMPS 231
Query: 162 LP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDKLPWFENFARPGFQDVSTI 218
K+ C+ E G+VW+W TP + P LP +NF I
Sbjct: 232 TRFVPTKVKSMPCI------EKDGLVWIWPGSATPESDIPSLLP-PDNFT----LHAEII 280
Query: 219 HELPYDHSILLENLMDPAHIPISHDRT---DWTAKREDAQPLGFEVTERTDRGFAGRWGK 275
+L +H +L+ENL+D AH P +H T W+ + F+ T RG+ W
Sbjct: 281 LDLEVEHGLLMENLLDLAHAPFTHTTTFAKGWSV----PSSVKFQTPVETLRGY---W-- 331
Query: 276 EKDEPLPNFLRFEAPCVLQNNRELVDSKTGE-------KHYFTGLFLCRPTGQGKSMLIV 328
+P P + F PC++ + L E K++ L +C P+ +GK+ L+
Sbjct: 332 ---DPYPIDMEFRRPCMVLSTIGLAKPGKLEGSDTQSCKNHLHQLHVCIPSTRGKTRLLY 388
Query: 329 RFGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQNEVLMKE----TVPTKELYLN 382
R + +P K P + + A KV ++D+ + Q E +++ +P L
Sbjct: 389 RM-SLDFAPWLKYVPFIQTLWVHLARKVLDEDLRLVEGQQERMVRGANVWNLPVPYDKLG 447
Query: 383 LRSSDTWVAEYRKW 396
+R YRKW
Sbjct: 448 VR--------YRKW 453
>gi|440790926|gb|ELR12186.1| rieske [2fe2s] domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 306
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Query: 77 YDWTEEWYPLYLTKDVPDDA---------PLGLTVFDQQIVLYKDGNGELRCYQDRCPHR 127
+D WYP+ ++P A P G + IVL++D +G +C QD+C HR
Sbjct: 8 FDMRNHWYPVAFASELPRGAAATGSRPTDPYGFQLLGDPIVLFRDQHGAAQCVQDKCSHR 67
Query: 128 LAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 187
A LS G + DGRLEC YHGWQF GKC IP P + + CV Y E +VW
Sbjct: 68 SAPLSVGTVRDGRLECKYHGWQFGSGGKCESIPSEPT-TRPGKPFCVYAYPTTEVYDLVW 126
Query: 188 VWMSQKTPPNPDKLP--WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
VW + +P F+ + + + + H + +EN++DP+H+P +HD T
Sbjct: 127 VWPGDPEKASEQHIPHHLFKEYRDKSWGKDTVTRDFDIGHGLFIENILDPSHLPFTHDGT 186
Query: 246 DWTAKREDAQPLGFEV 261
+KR A + E+
Sbjct: 187 --LSKRAKADEMKVEM 200
>gi|209524279|ref|ZP_03272829.1| Rieske (2Fe-2S) domain protein [Arthrospira maxima CS-328]
gi|423066784|ref|ZP_17055574.1| Rieske domain protein [Arthrospira platensis C1]
gi|209495370|gb|EDZ95675.1| Rieske (2Fe-2S) domain protein [Arthrospira maxima CS-328]
gi|406711809|gb|EKD07008.1| Rieske domain protein [Arthrospira platensis C1]
Length = 347
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 104/172 (60%), Gaps = 6/172 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +++V +P+G+ +++Q IVL++D G++ +DRCPHR KLS G+ I +E
Sbjct: 21 WYVVSSSQEV-TSSPVGVILWNQPIVLFRDTQGKINALEDRCPHRQVKLSHGKAIGDEIE 79
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN-PDKL 201
C YHGW+F G G CV +P L + K P+ ++TY V+E G +W+++ ++ P N P ++
Sbjct: 80 CTYHGWRFNGGGDCVYVPYLQENQKPPKCG-IKTYPVRELYGFIWIFIGEEKPDNEPLEI 138
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKRED 253
P +E+ V+TIH + +S L+ENLMD H + + WT + D
Sbjct: 139 PEWEHLNY--IATVATIHTQAH-YSFLVENLMDMYHGHLHQNWQAWTEAQLD 187
>gi|303272767|ref|XP_003055745.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
gi|226463719|gb|EEH60997.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
Length = 582
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 181/494 (36%), Gaps = 111/494 (22%)
Query: 47 RSSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQ 106
R+ TV P + E +DW + WYP+ + P + V +
Sbjct: 55 RTRAITVARATATAPPETESSATNETSAYQFDWAKAWYPMSPIAFLDPTIPNPMKVLGKS 114
Query: 107 IVLYKDGNGELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPAD 165
+V +K +G D CPHR+A LS G L + +L C YHGW+F G+G+ ++P + D
Sbjct: 115 LVAWKSEDGTWSVANDECPHRMAPLSMGFLSETNQLVCRYHGWEFNGKGEATRVP-MSVD 173
Query: 166 AKIPRSACVR------TYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIH 219
AK R+AC +Y VKE GV+WVW P P W E A P + +
Sbjct: 174 AKAERTACASPRGCAVSYPVKEQSGVLWVW------PTPGADAWLEASAVPVATEAAEFG 227
Query: 220 ELPYDHSIL---------LENLMDPAHIPISHDRTD-WTAKREDAQPLGFEVTERTDR-- 267
+LP D ++ LEN DP+H H + D T + + FE R +
Sbjct: 228 DLPGDWGMVELPVGYAPALENQFDPSHAEWLHAKYDEITGGLSETMNVKFEPMTRFNVKE 287
Query: 268 ------GFAGRWG--KEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPT 319
GF + G ++ + F APC ++R +G + Y + L PT
Sbjct: 288 GSMNKIGFIVQHGGYNAGNKDVSAERLFTAPC---SSRSEYKDASGNR-YLSAAILYTPT 343
Query: 320 GQGKSMLIVRFGATKR----------------------SPLAKLFPKWY----------- 346
G+ ++ +F A R +P F +WY
Sbjct: 344 EPGRCLMFTKFQAHTRRAVQGAGGKKITTGDRVNALLSAPAQNAF-RWYMEFMVKDPALV 402
Query: 347 --------FHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMD 398
+ A + +QD+ + + K+ Y SD VA +RKWMD
Sbjct: 403 RVGLNHGVYGNAAYTLGDQDIQAMHGVEVAMESREKSWKQSYYLPSPSDAGVAGFRKWMD 462
Query: 399 KVGHGMPYHFGHSTISLPKVPAVVEHAPAGL--VAGVSASSPAKGAIGTMHAPNLANRYF 456
+HA G+ GV + I RY
Sbjct: 463 ------------------------DHAGGGVRWAEGVRDDASKVKPIA-----QRLERYE 493
Query: 457 RHVIHCKGCSSVIK 470
RH HC+ C +K
Sbjct: 494 RHTRHCRHCKETLK 507
>gi|376003503|ref|ZP_09781313.1| oxygenase [Arthrospira sp. PCC 8005]
gi|375328160|emb|CCE17066.1| oxygenase [Arthrospira sp. PCC 8005]
Length = 347
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 103/172 (59%), Gaps = 6/172 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +++V +P+G+ +++Q IVL++D G++ +DRCPHR KLS G+ I +E
Sbjct: 21 WYVVSSSQEV-TSSPVGVILWNQPIVLFRDTQGKINALEDRCPHRQVKLSHGKAIGDEIE 79
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN-PDKL 201
C YHGW+F G G CV +P L K P+ ++TY V+E G +W+++ ++ P N P ++
Sbjct: 80 CTYHGWRFNGGGDCVYVPYLQESQKPPKCG-IKTYPVRELYGFIWIFIGEEKPDNEPLEI 138
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKRED 253
P +E+ V+TIH + +S L+ENLMD H + + WT + D
Sbjct: 139 PEWEHLNY--IATVATIHTQAH-YSFLVENLMDMYHGHLHQNWQAWTEAQLD 187
>gi|307103693|gb|EFN51951.1| hypothetical protein CHLNCDRAFT_54799 [Chlorella variabilis]
Length = 683
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 153/332 (46%), Gaps = 39/332 (11%)
Query: 83 WYPL-YLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
W+ + +++K P+D + +F Q VL++D G C D C HR LS GQ++DG L
Sbjct: 331 WFAVAFVSKLGPEDK-VPFELFGQAWVLFRDSEGRPACVLDECAHRGCPLSLGQVVDGNL 389
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW+F G+G+C K+P + R V E G VWVW + P P L
Sbjct: 390 VCPYHGWRFNGKGECTKMP----STNLCRGVAVSALPCAEQDGFVWVWPGWEEPTLP--L 443
Query: 202 PWFENFARP--GFQDVSTIH-ELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
P RP G++ + I E+P +H +L+ENL+D AH P +H T+ P+
Sbjct: 444 P---AVTRPPAGYRIHAEIEVEVPVEHGLLVENLLDLAHAPFTH-----TSTFARGWPVP 495
Query: 259 FEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVD-SKTGE-------KHYF 310
V R G W +P P + F PC+ ++ L K G +++
Sbjct: 496 DAVKFHASRLLGGNW-----DPYPIEMSFNPPCMTLSHVGLARPGKAGVGATPQDCQNHL 550
Query: 311 TGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQNEV 368
L +C P+ G + L+ R AT +L P + ++ A +V +D+ + Q +
Sbjct: 551 HQLHVCLPSRAGHTRLLYRM-ATDFLWWTELLPGIQHFWRYIAGQVLGEDLVLVLGQQDR 609
Query: 369 LMKETVPTKELYLNLRSSDTWVAEYRKWMDKV 400
L++ + + + S D YR+W + +
Sbjct: 610 LLR----GGDTWRHPVSYDKLAVRYRRWRNSL 637
>gi|119491090|ref|ZP_01623248.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
gi|119453635|gb|EAW34795.1| Rieske (2Fe-2S) region protein [Lyngbya sp. PCC 8106]
Length = 343
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 101/167 (60%), Gaps = 6/167 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +V PLG+T+++Q I+L++D G+++ +DRCPHR KLS G++I G +E
Sbjct: 17 WYVVARSNEV-KTQPLGVTLWNQPIILFRDSQGKIQALEDRCPHRQVKLSHGKIIAGLIE 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK-TPPNPDKL 201
C YHGWQF +G+CVKIP L + K+P +R Y V+E G +W+++ + T P +
Sbjct: 76 CAYHGWQFNTQGQCVKIPYLAENQKLPNCQ-IRNYPVQELDGFIWLFLGENSTQTQPLGV 134
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWT 248
P +++ VS IH + +S ++ENLMD H + + WT
Sbjct: 135 PEWDHLNYIA--TVSLIHCQAH-YSFVIENLMDMYHGHLHQNWQAWT 178
>gi|308808800|ref|XP_003081710.1| cell death suppressor protein (ISS) [Ostreococcus tauri]
gi|116060175|emb|CAL56234.1| cell death suppressor protein (ISS) [Ostreococcus tauri]
Length = 664
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 149/375 (39%), Gaps = 59/375 (15%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
Y WT++WYP+ + + + P + +V++K+G G ++D+CPHR+A L+EG++
Sbjct: 87 YSWTKQWYPVAVCDVLDETKPHATQLLGVDLVVWKNGTGTWSVFEDKCPHRMAPLTEGRV 146
Query: 137 -IDGRLECLYHGWQFEGEGKCVKIPQLP-----ADAKIPRSACVRTYEVKESQGVVWVW- 189
DG L C YH W+F+G+G C +PQ A K +C +QG+VW W
Sbjct: 147 ESDGTLLCAYHAWRFDGDGNCTAMPQASSAEEEARVKANEKSCAFKRPSMVAQGLVWAWG 206
Query: 190 --------MSQKTP----PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 237
S TP P D + A GF++ + +LPY + EN +DPAH
Sbjct: 207 ESGPEAEMESAMTPPLLVPEIDGIGKSGRAACGGFRNHWQVRDLPYGWNAFFENAIDPAH 266
Query: 238 IPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNF-----------LR 286
+SH R D P GF+ AG + D +P F
Sbjct: 267 AVVSHHTL--VGSRYD-DPAGFQCVVERPVTSAGGFRCAIDPAVPPFNTIGKYDAETSYD 323
Query: 287 FEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLA------- 339
F+ P +L+ + + HY C PT G V A +R
Sbjct: 324 FQPPALLKIDWRHEGGRFLTSHY------CTPTRPGWCRHFVVTIAQRRHEKGDAIRQHR 377
Query: 340 ----KLF----PKWYFHQNASKVFEQDMGFLSSQNEVL-----MKETVPTKELYLNLRSS 386
LF P W H QDM L Q +++ K KE ++
Sbjct: 378 WFKLNLFTLTSPAWLTHVLGPTFLHQDMVLLHQQEKIIAQGEGQKLAEKWKEQVFTPTTA 437
Query: 387 DTWVAEYRKWMDKVG 401
D + KW ++ G
Sbjct: 438 DKMTIFFYKWFERNG 452
>gi|428777231|ref|YP_007169018.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Halothece
sp. PCC 7418]
gi|428691510|gb|AFZ44804.1| Rieske (2Fe-2S) iron-sulfur domain protein [Halothece sp. PCC 7418]
Length = 340
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 101/175 (57%), Gaps = 7/175 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +V D P +T++ Q IVLY+ +G++ +DRCPHR +LSEG+L R+E
Sbjct: 15 WYVVARSSEVTTD-PYAVTLWKQPIVLYRQSDGQVCALEDRCPHRFVRLSEGKLQRDRVE 73
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-KL 201
C YHGWQF EGKCV IP L K+P +R Y V+E G +WV++ +T P ++
Sbjct: 74 CAYHGWQFNAEGKCVSIPYLTEKQKLP-PCQLRVYPVQEGDGFIWVFLGDETATVPRFQV 132
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWT-AKREDAQ 255
P +++ + ++ E +S L+ENLMD H + D WT AK E+ +
Sbjct: 133 PEWDHL---NYIATVSVIETQAHYSYLIENLMDMYHGHLHEDWQAWTDAKLENIE 184
>gi|5478803|dbj|BAA82482.1| chlorophyll b synthase [Prochlorothrix hollandica]
Length = 276
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 127/284 (44%), Gaps = 38/284 (13%)
Query: 97 PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 156
PLG +FDQ VL++D G C D C HR LS G++I GR++C YHGW+++ +G+C
Sbjct: 8 PLGFELFDQCWVLFRDDQGTAACILDECAHRACPLSLGKVIQGRIQCPYHGWEYDRQGEC 67
Query: 157 VKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN-PDKLPWF-ENFARPGFQD 214
V +P A S + T V E G++WVW P P P +NF
Sbjct: 68 VHMPSCQA-----ISNPILTLPVMEQGGMIWVWPGTDEPGALPSLAPTLPDNFTL----Q 118
Query: 215 VSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWG 274
+ +L +H ++LENL+D AH P +H T AK P + G W
Sbjct: 119 AELVMDLEVEHGLMLENLLDLAHAPFTHTGT--FAKGWPVPPF-VRFANAATTPWTGHW- 174
Query: 275 KEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATK 334
+P P + FE PC + + L G + + C P GQG++ L+ R
Sbjct: 175 ----DPYPIHMTFEPPCFVISTIGLRGKDCGR--HLHQVHACLPRGQGRTRLLYR----- 223
Query: 335 RSPLAKLFPKW---------YFHQNASKVFEQDMGFLSSQNEVL 369
LA F W + A++V ++D+ + Q E L
Sbjct: 224 ---LALDFGHWLRWVPGTHCLWQHLANRVIQEDLRLVQGQQERL 264
>gi|409993443|ref|ZP_11276584.1| Rieske (2Fe-2S) protein [Arthrospira platensis str. Paraca]
gi|291571667|dbj|BAI93939.1| probable dioxygenase, Rieske iron-sulfur component [Arthrospira
platensis NIES-39]
gi|409935712|gb|EKN77235.1| Rieske (2Fe-2S) protein [Arthrospira platensis str. Paraca]
Length = 347
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 103/172 (59%), Gaps = 6/172 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +++V +P+G+ +++Q IVL++D G++ +DRCPHR KLS G+ I +E
Sbjct: 21 WYVVSSSQEV-TSSPVGVILWNQSIVLFRDTQGKINALEDRCPHRQVKLSHGKAIGDEIE 79
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP-NPDKL 201
C+YHGW+F G G C +P L + K P+ ++TY V+E G +WV++ ++ P P ++
Sbjct: 80 CIYHGWRFNGGGDCAYVPYLQENQKPPKCG-IKTYPVRELYGFIWVFIGEEKPDIEPLEI 138
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKRED 253
P +E+ V+TIH + +S L+ENLMD H + + WT + D
Sbjct: 139 PEWEHLNY--IATVATIHTQAH-YSFLIENLMDMYHGHLHQNWQAWTEAQLD 187
>gi|238767620|dbj|BAH66649.1| chlorophyllide a oxygenase [Mesostigma viride]
Length = 299
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 141/305 (46%), Gaps = 43/305 (14%)
Query: 112 DGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS 171
D +G + C +D C HR LS G + +G C YHGWQ++ +GKC K+PQ A++
Sbjct: 1 DEDGRVACLRDECAHRACPLSLGTVENGHATCPYHGWQYDTDGKCTKMPQTRLRAQVR-- 58
Query: 172 ACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWF---ENFARPGFQDVSTIHELPYDHSIL 228
V T V+E G++WV+ P P+ LP F NF + E+P +H ++
Sbjct: 59 --VSTLPVREHDGMIWVYPGSNEP--PEHLPSFLPPSNFT----VHAELVLEVPIEHGLM 110
Query: 229 LENLMDPAHIPISHDRT---DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFL 285
+ENL+D AH P +H T W+ + F+V ++ AG W EP P +
Sbjct: 111 IENLLDLAHAPFTHTETFAKGWSV----PDSVNFKVAAQS---LAGHW-----EPYPISM 158
Query: 286 RFEAPCVLQNNRELVDSKTGEKHYFTG--------LFLCRPTGQGKSMLIVRFGATKRSP 337
+FE PC+ + L E F+G L +C P G+G++ ++ R +
Sbjct: 159 KFEPPCMTISEIGLAKPGQLEAGKFSGECKQHLHQLHVCMPAGEGRTRILYRM-CLDFAH 217
Query: 338 LAKLFP--KWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRK 395
K P + + A++V +D+ + Q + +++ +++ N + D YR
Sbjct: 218 WVKYIPGIQNVWSGMATQVLGEDLRLVEGQQDRMLR----GADIWYNPVAYDKLGVRYRS 273
Query: 396 WMDKV 400
W V
Sbjct: 274 WRRAV 278
>gi|303271473|ref|XP_003055098.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
gi|226463072|gb|EEH60350.1| chloroplast envelope protein translocase family [Micromonas pusilla
CCMP1545]
Length = 662
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 153/342 (44%), Gaps = 58/342 (16%)
Query: 74 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSE 133
++WT++WYP+ + + P + +V+++DG+G ++D+CPHRLA LSE
Sbjct: 92 AGSFNWTKQWYPVAVIDLIDATKPHPTQLLGVDLVVWRDGDGRWSAFEDKCPHRLAPLSE 151
Query: 134 GQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPR-----SACVRTYEVKESQGVVW 187
G++ DG L C YH W+F+ +GKC +PQ + + R +C E+QG+VW
Sbjct: 152 GRVEDDGTLLCAYHAWRFDADGKCADMPQASSREEEERVKSNPRSCAFARPTMEAQGLVW 211
Query: 188 VW---------MSQKTPP--NPDKLPWFENFARPG--FQDVSTIHELPYDHSILLENLMD 234
W ++ TPP P+ +N PG +++ + ++PY + EN +D
Sbjct: 212 AWGEGGKEAEIEARMTPPLLVPEIEGVGKNGEAPGGAYRNHWQVRDMPYGWAAFFENAID 271
Query: 235 PAHIPISHDRTDWTAKREDAQPLGFE-VTERTDRGFAGRWGKEKDEPLPNF--------- 284
PAH +SH R D P GF+ V ER AG + D +P F
Sbjct: 272 PAHAVVSHHTL--VGSRYD-DPAGFKCVVERPMTAEAG-FRCALDPAVPPFNTIGKYDAE 327
Query: 285 --LRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPT---------------GQGKSMLI 327
F+ PC+L+ +D + + + T + C PT G+G+S+
Sbjct: 328 TSYDFQPPCLLK-----IDWRHEQARFLTSHY-CVPTRPGWCRHFVATVCQRGEGESVRQ 381
Query: 328 VRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVL 369
R+ K + P W H QDM L Q +++
Sbjct: 382 HRW--FKLNLFTLTSPAWMTHVLGPTFLHQDMVLLHQQEKII 421
>gi|255071573|ref|XP_002499461.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
gi|226514723|gb|ACO60719.1| chloroplast envelope protein translocase family [Micromonas sp.
RCC299]
Length = 609
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 133/529 (25%), Positives = 194/529 (36%), Gaps = 128/529 (24%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+DW WYP+ + D AP + V + IV +K G +D CPHR+A LS G +
Sbjct: 112 FDWARAWYPMSPIDFLDDTAPNPMKVLGKSIVAWKGEGGAWAVVEDSCPHRMAPLSLGFI 171
Query: 137 I-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSA------CVRTYEVKESQGVVWVW 189
D ++ C YHGW+F +GK IP + DAK ++A C +Y VKE GV+WVW
Sbjct: 172 SEDKQIVCRYHGWEFGNDGKATAIP-MSTDAKAEKTACESPRSCAVSYPVKEEAGVLWVW 230
Query: 190 MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSIL---------LENLMDPAHIPI 240
P W E A P + ELP + ++ LEN DP+H
Sbjct: 231 ------PTAGADAWLEASATPVATAAAEFGELPGEWGMVELPVGYAPALENQFDPSHAEW 284
Query: 241 SHDRTDWTAKREDA------QPLG-FEVTERT--DRGF----AGRWGKEKDEPLPNFLRF 287
H + + + D +P+ F V E T GF G KD F
Sbjct: 285 LHAKYNAESGLLDGAMNVAYEPMTRFNVKEGTMGAGGFTVEHGGYNAGNKDVSAERL--F 342
Query: 288 EAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPL--------- 338
APC ++R G + Y + L PT G+ ++ +F A R +
Sbjct: 343 TAPC---SSRSEYKDANGNR-YLSAAILYTPTEPGRCLMFTKFQAHTRKAVQGAGKAKVT 398
Query: 339 ------------AKLFPKWY-------------------FHQNASKVFEQDMGFLSSQNE 367
AK +WY + A + +QD+ +
Sbjct: 399 AGDRWRGILESPAKTAFQWYMEFVAKDPELCRIGLQHGVYGAGAYTLGDQDIQAMHGVEV 458
Query: 368 VLMKETVPTKELYLNLRSSDTWVAEYRKWMDK-VGHGMPYHFGHSTISLPKVPAVVEHAP 426
+ K+ Y SD VA +R WMDK G G+ + G P
Sbjct: 459 AMESAERDWKKSYYLPTPSDAGVAGFRTWMDKHAGGGVKWADGTRDDESKMKPIA----- 513
Query: 427 AGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSL-----SV 481
RY RH HC+ C + ++ + L ++
Sbjct: 514 -----------------------QRLERYERHTRHCRYCKAALRELGVLEERLVDFSNAM 550
Query: 482 VAAALTV-LAILASGRQWKAFCLASASLCLAGVYACSTAIAMNTTNFIR 529
+AA L L G++ A SLCLAG +A+N T +R
Sbjct: 551 LAAGLVFGLGGAVVGQEGPAVV----SLCLAG-------LAVNATESVR 588
>gi|224075986|ref|XP_002304860.1| predicted protein [Populus trichocarpa]
gi|222842292|gb|EEE79839.1| predicted protein [Populus trichocarpa]
Length = 267
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 91/182 (50%), Gaps = 11/182 (6%)
Query: 71 ERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLA 129
+ Q +DW +WYP+ D+ P V +V++ D N E + + D CPHRLA
Sbjct: 75 DSQQETFDWYAQWYPVMPVCDLDKREPHAKKVMGLDLVVWWDRNENEWKVFDDTCPHRLA 134
Query: 130 KLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKESQGV 185
LSEG++ GRL+C+YHGW F G G C IPQ P D + ACV Y +
Sbjct: 135 PLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPPDGPPVHTFKKACVAAYPTTVQNDI 194
Query: 186 VWVWMSQKTPPNPD-----KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPI 240
VW W +P D K P+ P + E P+ + IL+ENL+DPAH+P
Sbjct: 195 VWFW-PNSSPEYKDILSSKKPPYIAELDDPSYIKTMGNREFPFGYEILIENLVDPAHVPY 253
Query: 241 SH 242
+H
Sbjct: 254 AH 255
>gi|238767608|dbj|BAH66643.1| chlorophyllide a oxygenase [Prasinoderma coloniale]
Length = 304
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 143/322 (44%), Gaps = 54/322 (16%)
Query: 111 KDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPR 170
+D NG C +D C HR LS G+ + G+++C YHGW+FE +G+C K P I
Sbjct: 1 RDANGVAGCVRDSCAHRACPLSLGKNVGGKVQCPYHGWEFETDGRCTKTPSTNELKNIR- 59
Query: 171 SACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHE-----LPYDH 225
V V E G++WV+ ++ PP + F A PG D TIH +P +H
Sbjct: 60 ---VEALPVVERDGMIWVYPGEEDPPEDHQN--FTALAPPG--DEFTIHAEIVLTVPVEH 112
Query: 226 SILLENLMDPAHIPISH-----------DRTDW-TAKREDAQPLGFEVTERTDRGFAGRW 273
+L+ENL+D AH P +H DR D+ T K AQ +G G G W
Sbjct: 113 GLLMENLLDLAHAPFTHTSTFAKGWSVPDRVDFKTVKNAVAQQIG---------GLGGEW 163
Query: 274 GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE--------KHYFTGLFLCRPTGQGKSM 325
+P P + F+ PC++ + LV E + L +C P G++
Sbjct: 164 -----QPYPIDMTFQPPCMVLSQIGLVKPGQVEAETRASDCDRHLHQLHVCLPAKDGETR 218
Query: 326 LIVRFGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNL 383
L+ R + + AK P ++ + A++V +D+ + Q + +++ N
Sbjct: 219 LLYRM-SLDFAKFAKNLPFVSEFWEELANQVLGEDLVLVEGQQ----RNMKAGMDVWSNP 273
Query: 384 RSSDTWVAEYRKWMDKVGHGMP 405
+ D YR+W V +G P
Sbjct: 274 VAYDKLGVRYRRWRTGVQYGNP 295
>gi|62946445|ref|YP_227649.1| hypothetical protein all7348 [Nostoc sp. PCC 7120]
gi|17134547|dbj|BAB77106.1| all7348 [Nostoc sp. PCC 7120]
Length = 460
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 160/362 (44%), Gaps = 44/362 (12%)
Query: 74 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSE 133
++ W ++WYP+ T + P +T+ +++V+++D + D CPH+LA+LS
Sbjct: 2 TTNFSWIKQWYPITPTSYLEPSYPTPITLLGKKLVVWQDKDHTWVVMDDVCPHKLAQLSL 61
Query: 134 GQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVV 186
G + DG L C +HGW F+G GKC IP L D + +AC V TY + QG++
Sbjct: 62 GNINQDGNLMCRHHGWCFDGAGKCTNIPML-NDPQALMNACSSQRSQVTTYPTQVLQGLL 120
Query: 187 WVWMSQKTPPNPDKLPWFENFARPGFQDVSTI---------HELPYDHSILLENLMDPAH 237
WVW P+ + ++ +P TI E+P +++ +E+ DP+H
Sbjct: 121 WVW------PDNSSTAFADSALKPPALMPDTIGSSMSDWFMSEVPVGYTVCVESSFDPSH 174
Query: 238 IPISHDRTDWTAKREDAQPLGFEVTER--TDRGFAGR------WGKEKDEPLPNFLRFEA 289
H+ + + FEV + + GF + + K+ D RF
Sbjct: 175 AQFLHEGIAGFSPQRAIPIENFEVMGKMSAEDGFILKHSGYNVFNKDMDAT----RRFTP 230
Query: 290 PCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSM--LIVRFGATKRSPLAKLFPKW-- 345
PC +N + G+ F F+ G K + I + KR+ + P +
Sbjct: 231 PC---SNTTIYKYSNGKSAIFQLYFVPTKPGYCKQIGKFIADIPSQKRNFWFQSLPTYLQ 287
Query: 346 --YFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
H ++ K+ QD+ + SQ E P ++LY +DT + +RKW+D+ G
Sbjct: 288 TGLNHSSSYKLSNQDLSMMHSQTINESLENKPWQKLYFLPSVADTGIVTFRKWLDEFAGG 347
Query: 404 MP 405
P
Sbjct: 348 KP 349
>gi|428298085|ref|YP_007136391.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
gi|428234629|gb|AFZ00419.1| Pheophorbide a oxygenase [Calothrix sp. PCC 6303]
Length = 500
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 110/448 (24%), Positives = 189/448 (42%), Gaps = 69/448 (15%)
Query: 74 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSE 133
+ ++ WT++WYP+ + P +T+ + +V+++D + D CPH+LA+LS
Sbjct: 42 MTNFSWTKQWYPVTPISYLEPSHPTAITLLGKNLVIWRDKQQKWVAMDDVCPHKLAQLSL 101
Query: 134 GQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVV 186
G + +G + C +HGW F+G G C IP L +D K +AC + TY + QG++
Sbjct: 102 GSIDKNGNIMCRHHGWCFDGTGTCTNIPML-SDEKALETACKSERSQITTYPTQVLQGLL 160
Query: 187 WVWMSQKTPPNPDKLPWFENFARPGFQDVST-----IHELPYDHSILLENLMDPAHIPIS 241
W+W + +P + + P FQ S+ + E+P +++ E+ DP+H
Sbjct: 161 WIW-ADNSPTAFEDSNLKQPALMPEFQLDSSATDWFMSEVPVGYTVSFESSFDPSHAQFL 219
Query: 242 HDRTDWTAKREDAQPL-GFEVTER--TDRGFAGR------WGKEKDEPLPNFLRFEAPCV 292
H+ + E A P+ FEV+ + GF + + K+ D +F PC
Sbjct: 220 HNGIAGFSP-ERAIPMEHFEVSGEISAENGFTLKHSGYNIFNKDMDAT----RQFTPPCC 274
Query: 293 LQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSM--LIVRFGATKRSPLAKLFPKW----Y 346
N + G+ F F+ G K + I + KR+ +L PK+
Sbjct: 275 ---NTTIYKYSNGKSALFQLYFVPTEPGYCKHIGKFITDTFSQKRNFWFELLPKYLQTGL 331
Query: 347 FHQNASKVFEQDMGFLSSQ--NEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGM 404
H ++ K+ QD+ + SQ NE L E P ++ Y +D + +RKW+D+ G
Sbjct: 332 RHSSSYKLSNQDLSMMHSQAMNESL--EDKPWQKSYFMPSLADIGIVTFRKWLDEFAGGK 389
Query: 405 PYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKG 464
P G + +VP + L + + RH HC
Sbjct: 390 PAWQG-----MKEVP-----------------------FQELSDEQLYDIWHRHTKHCPS 421
Query: 465 CSSVIKAFSTWKNSLSVVAAALTVLAIL 492
C + K+ A L +L +L
Sbjct: 422 CRQSLVLIDKVKDYCQNFTAVLAILGLL 449
>gi|262197943|ref|YP_003269152.1| Rieske (2Fe-2S) domain-containing protein [Haliangium ochraceum DSM
14365]
gi|262081290|gb|ACY17259.1| Rieske (2Fe-2S) iron-sulphur domain protein [Haliangium ochraceum
DSM 14365]
Length = 367
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 138/301 (45%), Gaps = 23/301 (7%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L +++ PL T+ ++++VL++D +G DRC HR A LSEG L DG +
Sbjct: 29 WYVACLAEELGRKKPLARTIMEERLVLWRDADGRAVAMLDRCLHRNAPLSEGDLFDGCIG 88
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP--NPDK 200
C YHGW ++ +G CV +P + P + + T+ V+E G+VWVWM P P
Sbjct: 89 CPYHGWTYDRDGACVNVPSAGPEGA-PVALRIETFPVRERDGLVWVWMGGDVAPEREPFA 147
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
+P+++ PG++ + D + L+EN MD H H R + ++ A + E
Sbjct: 148 MPFYDT---PGWRRYYMVTAFDNDVTSLVENFMDVPHTVFVH-RGWFRSRSRRAVDMRVE 203
Query: 261 VT--------ERTDR--GFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYF 310
T E+ D GF K P+ + RF P + + + +++TG F
Sbjct: 204 RTADSVLVSYEQPDDQIGFTRLLLNPKGLPMTHTDRFYMPNITRVDYLWGEAETG----F 259
Query: 311 TGLFLCRPTGQGKSML--IVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEV 368
C P G+SM+ ++ + +PL + + V EQD+ + V
Sbjct: 260 VITSQCTPVDAGRSMVYTLISYKLPISAPLLTPVLQPLLRRYTRAVIEQDVDIMRVHGSV 319
Query: 369 L 369
L
Sbjct: 320 L 320
>gi|115483520|ref|NP_001065430.1| Os10g0567100 [Oryza sativa Japonica Group]
gi|78709025|gb|ABB48000.1| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113639962|dbj|BAF27267.1| Os10g0567100 [Oryza sativa Japonica Group]
gi|215693283|dbj|BAG88665.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185041|gb|EEC67468.1| hypothetical protein OsI_34699 [Oryza sativa Indica Group]
gi|222613295|gb|EEE51427.1| hypothetical protein OsJ_32507 [Oryza sativa Japonica Group]
Length = 542
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 153/339 (45%), Gaps = 49/339 (14%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++Q V+++ +G C Q+ C HR L G + +GR++
Sbjct: 221 WYPVVFSGDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVSEGRIQ 280
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C +HGW++ +GKC K+P A + +R+ E +G+VW+W TP +
Sbjct: 281 CPFHGWEYSTDGKCEKMP-----ATKLLNVRIRSLPCFEQEGMVWIWPGDGTPES----- 330
Query: 203 WFENFARPGFQDVS--TIH-----ELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ 255
P Q S TIH ELP +H +LL+NL+D AH P +H T AK
Sbjct: 331 -----TIPSLQPPSGFTIHAEMVMELPVEHGLLLDNLLDIAHAPFAHTST--FAKGWSVP 383
Query: 256 PLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE--------- 306
L +T + G G W +P P + F PC++ + + SK G+
Sbjct: 384 SLVKFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTTGI--SKPGKLEGKSIKQC 434
Query: 307 KHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWY--FHQNASKVFEQDMGFLSS 364
+ L +C P+ + K+ ++ + + +P K P + + KV +D+ +
Sbjct: 435 STHLHQLHICLPSSRNKTRMLYQM-SLNFAPWLKHIPFMHILWSHFGEKVLNEDLRLVLG 493
Query: 365 QNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
Q E ++ ++ S D YR W D + G
Sbjct: 494 QQERMINGA----NVWNWPVSYDKLGIRYRLWRDAIERG 528
>gi|358455131|ref|ZP_09165359.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
gi|357081384|gb|EHI90815.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
Length = 367
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 92/179 (51%), Gaps = 4/179 (2%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLA 129
G R A+ WYP+ D+ APL + +VL++D G C DRCPHR A
Sbjct: 7 GMRVTAEPLLRHYWYPVAFASDL-GGAPLARRLLGTDVVLWRDAEGRPACAADRCPHRDA 65
Query: 130 KLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW 189
KLS G DG + C YHGW++ +GKCV IPQ +I A V TY V E+ G++WV
Sbjct: 66 KLSRGWTEDGAVVCPYHGWRYGSDGKCVLIPQNAPGQRISPRAVVATYPVTEALGLLWVC 125
Query: 190 MSQKTPPNP--DKLPWFENFARPGFQDVSTIHEL-PYDHSILLENLMDPAHIPISHDRT 245
+ + P +P F +PG++ V + P LL+N +DPAHI H RT
Sbjct: 126 LDPASEPATAMAGIPAIPQFGQPGWRVVQEFDTVWPCSAPHLLDNNLDPAHIAFVHRRT 184
>gi|308812898|ref|XP_003083756.1| unnamed protein product [Ostreococcus tauri]
gi|116055637|emb|CAL58305.1| unnamed protein product [Ostreococcus tauri]
Length = 523
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 194/515 (37%), Gaps = 99/515 (19%)
Query: 64 SAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQD 122
S + RG+ + +DW WYPL T + D P L V +++V Y D GE R +D
Sbjct: 13 SEQATRGDGE--SFDWFSAWYPLRPTSFLDPDEPNELRVLGKKLVAYLDPTCGEWRVLED 70
Query: 123 RCPHRLAKLSEGQLI-DGRLECLYHGWQFEG-EGKCVKIPQLPADA------KIPRSACV 174
CPHR A LS G + DG L C YHGW F+G +GKCV IP +A PRS C
Sbjct: 71 SCPHRRAPLSLGYVQRDGALACRYHGWAFDGKDGKCVAIPMSVDEAAEKTACASPRS-CA 129
Query: 175 RTYEVKESQGVVWVWMSQKTPPN--PDKLPWFENFARPG-FQDVSTIHELPYDHSILLEN 231
+Y + G++WVW + + A G + ELP ++ LEN
Sbjct: 130 TSYPCRVEDGILWVWPTSGADAALLSATTACATSLAAEGTLPGEWGMVELPVGYAPALEN 189
Query: 232 LMDPAHIPISHDRTDWTAKREDAQPLGF---------EVTERTDRGFAGRWGKEKDEPLP 282
DP+H H + D + + GF T D G K
Sbjct: 190 QFDPSHAEWLHAKYDENGQLSEKDNAGFVPMTDFSLRAETMNKDGFVVDHGGYNKSNVGV 249
Query: 283 NFLR-FEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRF----------- 330
R F APC + E +D+K + Y + L PT G++++ +F
Sbjct: 250 TASRVFTAPC--SSRSEYLDAKG--RKYLSAAILYAPTEPGRTLMFTKFQAHQSGAVQGA 305
Query: 331 GATKRSPL----------AKLFPKWYFH--------------------QNASKVFEQDMG 360
GA K SP+ AK +Y NA + +QD+
Sbjct: 306 GARKVSPVDRLNALITAPAKGLFDFYLDTFTSDPKLVRVGLSHGSPPGSNAYYLGDQDIL 365
Query: 361 FLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPA 420
+ + + P K+ Y +D V+ +R WMD H+ + P
Sbjct: 366 AMHGVEVEMELQNKPWKQSYYLPTPADAGVSTFRNWMDT----------HAGGKVRWAPG 415
Query: 421 VVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLS 480
VV+ A S K +RY RH HC C + + +
Sbjct: 416 VVDDA-----------SKVKSEAEQF------DRYHRHTKHCVACKTALNELGVLEERCM 458
Query: 481 VVAAALTV--LAILASGRQWKAFCLASASLCLAGV 513
+ + AL L + +G + A+ + CLAG
Sbjct: 459 LASKALLASGLFLAVTGAAFDQQAPATIAACLAGA 493
>gi|18854993|gb|AAL79685.1|AC087599_4 putative chlorophyll synthase [Oryza sativa Japonica Group]
Length = 519
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 153/339 (45%), Gaps = 49/339 (14%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++Q V+++ +G C Q+ C HR L G + +GR++
Sbjct: 198 WYPVVFSGDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVSEGRIQ 257
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C +HGW++ +GKC K+P A + +R+ E +G+VW+W TP +
Sbjct: 258 CPFHGWEYSTDGKCEKMP-----ATKLLNVRIRSLPCFEQEGMVWIWPGDGTPES----- 307
Query: 203 WFENFARPGFQDVS--TIH-----ELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ 255
P Q S TIH ELP +H +LL+NL+D AH P +H T AK
Sbjct: 308 -----TIPSLQPPSGFTIHAEMVMELPVEHGLLLDNLLDIAHAPFAHTST--FAKGWSVP 360
Query: 256 PLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE--------- 306
L +T + G G W +P P + F PC++ + + SK G+
Sbjct: 361 SLVKFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTTGI--SKPGKLEGKSIKQC 411
Query: 307 KHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWY--FHQNASKVFEQDMGFLSS 364
+ L +C P+ + K+ ++ + + +P K P + + KV +D+ +
Sbjct: 412 STHLHQLHICLPSSRNKTRMLYQM-SLNFAPWLKHIPFMHILWSHFGEKVLNEDLRLVLG 470
Query: 365 QNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
Q E ++ ++ S D YR W D + G
Sbjct: 471 QQERMINGA----NVWNWPVSYDKLGIRYRLWRDAIERG 505
>gi|326315963|ref|YP_004233635.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323372799|gb|ADX45068.1| Rieske (2Fe-2S) iron-sulfur domain protein [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 325
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 102/178 (57%), Gaps = 19/178 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ L +DV +PL + DQ++VL++D G + DRCPHR A+LS G++ DGRLE
Sbjct: 7 WHPVALAEDV-GSSPLAALLLDQRLVLWRDAAGAPHAFPDRCPHRGARLSLGRVHDGRLE 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQFEG G+CV +P LP + P V + V+E+ G+VWV ++ P LP
Sbjct: 66 CPYHGWQFEGGGRCVHVPALP-QFQPPAGHRVECFGVREAHGLVWVCLA----PGDAALP 120
Query: 203 WF--ENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHDRTDWTAKREDA 254
F E+ AR + ++ PYD + ++EN +D +H H+ W R+ A
Sbjct: 121 AFTAEDDAR-----LRKLNCGPYDVAASAPRIVENFLDMSHFGFVHE--GWLGARDAA 171
>gi|298710363|emb|CBJ31980.1| Rieske (2Fe-2S) region [Ectocarpus siliculosus]
Length = 495
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 151/376 (40%), Gaps = 58/376 (15%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL-IDGR 140
+WYP+ KD + + + +V++++ G + DRCPHR A LSEG++ DG
Sbjct: 3 KWYPVLSEKDSDPGKAHAVQLLGKDLVVWRNTEGRWSAFDDRCPHRAAPLSEGRVEKDGS 62
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKI---PRSACVRTYEVKESQGVVWVW-------- 189
L C YH W+F+ +GKC+ IPQ D K PR AC + Y + +Q +VWVW
Sbjct: 63 LLCAYHAWRFDADGKCLSIPQSDRDGKDETNPR-ACAKLYPTQVAQDMVWVWGENGSDAV 121
Query: 190 -MSQKTPPN-----PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
S T P DK PG V T +L Y EN+MDPAH+ +SH
Sbjct: 122 LESLLTKPALVSALEDKEGIKSGRVVPG---VVTQRDLAYSWETFWENVMDPAHVVVSHH 178
Query: 244 RTDWTAKREDAQPLGFEVTER---TDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELV 300
KR A+PL E T + T GF + F P +++ EL
Sbjct: 179 GL--MGKRSMAKPLDLEATPQPAMTKEGFVVDNNSPQFGAKQGVATFVPPALVEIATELE 236
Query: 301 DSKT------------GEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSP-----LAKLFP 343
D KT G F P G++ K +P +A++ P
Sbjct: 237 DGKTISLVQYNIPTRPGWSRMFNRQLTITPEVVGENKGDDEKDKKKGAPSLLQLVARISP 296
Query: 344 -----------KWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNL---RSSDTW 389
W H + QDM L Q +++ + + +SD
Sbjct: 297 VKLKLAPNEQRAWIQHIFSHMFVHQDMPLLYHQEKIMASSGHTGAKWSDGIYTPTTSDKG 356
Query: 390 VAEYRKWMDKVGHGMP 405
+ RKW+ K G G P
Sbjct: 357 IHTLRKWIKKFGSGGP 372
>gi|427720732|ref|YP_007068726.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Calothrix
sp. PCC 7507]
gi|427353168|gb|AFY35892.1| Rieske (2Fe-2S) iron-sulfur domain protein [Calothrix sp. PCC 7507]
Length = 353
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 91/167 (54%), Gaps = 6/167 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +V + P G+T++ Q I LY+D G++ +DRCPHR KLS GQ+I LE
Sbjct: 26 WYVVARSYEVTN-KPTGVTLWQQAIALYRDSTGKVHALEDRCPHRQVKLSHGQVISDELE 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP-NPDKL 201
C YHGW+F G+C +P L A+ K+P S +R + VKE G +W++ K P P L
Sbjct: 85 CAYHGWRFNSTGECAAVPYLAANQKLP-SCKIRRHSVKEQDGFIWLFPGDKEPSTEPMGL 143
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWT 248
P +E+ V H +S L+ENLMD H + D W
Sbjct: 144 PEWEHLNYIASVAVIDCHA---HYSYLIENLMDMYHGHLHQDLQAWA 187
>gi|397570853|gb|EJK47493.1| hypothetical protein THAOC_33779, partial [Thalassiosira oceanica]
Length = 706
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 171/420 (40%), Gaps = 86/420 (20%)
Query: 64 SAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG---------- 113
+AE+ + + + ++ WT+ WYPL + + P +F +V++ DG
Sbjct: 127 AAEDPQADGEEEEFVWTKNWYPLVPVEILDLAKPHKFRLFGTDVVVWNDGPLDNGGGTFQ 186
Query: 114 ------------NGELRCYQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIP 160
G R + D CPHR LSEG++ DG L C YHGW+F+G+GK V +P
Sbjct: 187 PKKDRPKNAKKSEGTWRVFVDSCPHRRVPLSEGRIEDDGSLLCSYHGWRFDGDGKAVAVP 246
Query: 161 QLPAD-----AKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK----LPWFENFARP- 210
Q+ ++ P+S C +Y V G+++VW + + +P + F +
Sbjct: 247 QVDSNELELIKSNPKSDC-GSYPVTIVDGLMYVWPETGSDARIESALADVPVNDRFDQAD 305
Query: 211 GFQDVS------TIHELPYDHSILLENLMDPAHIPISHDRT------DWTAKREDAQPL- 257
+D S + ELPY H LEN++DPAH+PISH D T + +PL
Sbjct: 306 AVKDGSVWKGPWSYRELPYGHDYFLENVVDPAHVPISHHNVVGSRYGDQTLNLKTGKPLD 365
Query: 258 --GFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFL 315
GF + D AG + F+AP + L+++K G+
Sbjct: 366 KTGFSIVSPGDAANAGG----------SSTTFKAPSQV-----LIEAKFGDGAKQWLELY 410
Query: 316 CRPTGQG-----KSMLIVRFGATKRSPLAKLF----PKWYFHQNASKVFEQDMGFLSSQN 366
P+ G M+I + + L + F PKW H A QD FL Q
Sbjct: 411 TSPSRPGFCNHVGRMVIQKDASGGMPQLLRAFTAPLPKWLNHLLAPSFLNQDALFLHGQE 470
Query: 367 EVL-MKETVPTKELYLNLRSSDTW------------VAEYRKWMDKVGHGMPYHFGHSTI 413
L E T ++ D++ V +R WM K G G G T+
Sbjct: 471 RSLTFGEEYVTSRPQTGKKAGDSYASAVMPCSADRGVMMFRSWMAKYGKGFIPFQGDKTM 530
>gi|332529285|ref|ZP_08405248.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Hylemonella
gracilis ATCC 19624]
gi|332041295|gb|EGI77658.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Hylemonella
gracilis ATCC 19624]
Length = 336
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 151/338 (44%), Gaps = 33/338 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
++P+ L +DV + PL + + + +VL++D G+ R + DRCPHR A LS G+++DG LE
Sbjct: 7 FHPVALCRDV-HEQPLPVRLLGEDLVLWRDATGQARVFTDRCPHRGAALSMGRVVDGELE 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+FE +G+CV IP +P P ++V+E+ G+VWV ++ P ++P
Sbjct: 66 CPYHGWRFEPQGRCVAIPAVPGFTP-PEGHRACAHQVREAYGLVWVCLNPAHTAPPAQVP 124
Query: 203 W-FENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHDRTDWTAKREDAQPL 257
FA ++ + PY+ ++EN +D +H H T W R+
Sbjct: 125 VPLPAFAAEDDVNLRKVTSGPYEVQASAPRIVENFLDMSHFGFIH--TGWLGARDHTAMQ 182
Query: 258 GFEVTERTDRGF----AGRWGKEKDEPLPNFLRFEAP--------CVLQNNRELVDSKTG 305
++V E+T G W + E CVL E K
Sbjct: 183 PYKV-EKTPTGIFVSDCFAWQPQSSVHAQGGAMVEYTYEVAGPYHCVLTKVPEATAVKLA 241
Query: 306 EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
LF+C P +S + +R P + +F QD L SQ
Sbjct: 242 NFRESIALFVC-PVDPERSRVWIRMAMNHSED-----PDQTLIDFQNTIFGQDQPVLESQ 295
Query: 366 NEVLM--KETVPTKELYLNLRSSDTWVAEYRKWMDKVG 401
L+ E P KE++ ++D + YR+++ ++G
Sbjct: 296 RPKLLPISEHAPVKEVH---SAADLASSHYRRYLRELG 330
>gi|149921339|ref|ZP_01909793.1| vanillate O-demethylase oxygenase, putative [Plesiocystis pacifica
SIR-1]
gi|149817772|gb|EDM77236.1| vanillate O-demethylase oxygenase, putative [Plesiocystis pacifica
SIR-1]
Length = 354
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 17/204 (8%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG-QLIDG 139
+ WY + + ++ APL T+ ++++ + G+L + CPHR A+LS G QL DG
Sbjct: 4 DSWYAVAWSHEI-KRAPLARTILGRELLFRRSPTGQLHVTTNVCPHRQARLSAGKQLADG 62
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 199
R++C YH W+F+ +G+CV +P LP DA++P AC+ +Y E Q +VWVWM + +
Sbjct: 63 RIQCPYHAWEFDLDGRCVNVPTLPEDARVPPQACLTSYPAVEEQSLVWVWMGRPGGESTH 122
Query: 200 KLPWFENFARPGFQDVSTIHELP-----YDHSILLENLMDPAHIPISHDRT---DWTAKR 251
+P F+ + G Q LP ++ L+EN +DP+HI H T +W A
Sbjct: 123 PVPGFD-YDSLGAQ--VRHQRLPSTRWQANYIDLIENALDPSHIQTVHPNTLGPNWAATV 179
Query: 252 EDAQPLGFEVTERTDRGFAGRWGK 275
+ FE RGF G+
Sbjct: 180 GNVSIEAFE----NGRGFTAVSGE 199
>gi|411117878|ref|ZP_11390259.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoriales cyanobacterium JSC-12]
gi|410711602|gb|EKQ69108.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoriales cyanobacterium JSC-12]
Length = 355
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 97/177 (54%), Gaps = 10/177 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +V D PLG+ ++ Q IVLY+D ++ +DRCPHR KLS G ++DG LE
Sbjct: 22 WYVVARASEVTD-KPLGVVLWHQDIVLYRDRQNQIHALEDRCPHRFVKLSRGAVVDGELE 80
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-----MSQKTPPN 197
C YHGW+ EG+C +P L + K+P S+ +R+Y V+E G +W++ + Q
Sbjct: 81 CAYHGWRIGTEGQCTCVPYLAENQKLP-SSKIRSYPVQELNGFIWLYPGDRTLLQAQNIQ 139
Query: 198 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDA 254
P LP +++ G +S I + S L+ENLMD H + + W + DA
Sbjct: 140 PMGLPEWDHLNYIG--SISVI-DAKAHFSYLIENLMDMYHGHLHQNLQAWASAELDA 193
>gi|5478799|dbj|BAA82480.1| chlorophyll b synthase [Marchantia polymorpha]
Length = 282
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 135/291 (46%), Gaps = 38/291 (13%)
Query: 95 DAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 154
D + + F++ VL++ +G C +D C HR LS G ++DGR++C YHGW++ G
Sbjct: 6 DIMIPIESFEEPWVLFRGKDGRAGCVRDECAHRACPLSLGTVVDGRIQCPYHGWEYNTGG 65
Query: 155 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDKLPWFENFARPGF 212
KC K+P + P +R E G+VW+W +TP P LP EN+
Sbjct: 66 KCEKMP-----STRPLKTGIRALPCIEQDGMVWIWPGDETPAATLPSLLP-PENYT---- 115
Query: 213 QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTD-----R 267
+ ELP +H +L+ENL+D AH P +H T AK G+ V +
Sbjct: 116 IHAEIVLELPVEHGLLMENLLDLAHAPFTHTST--FAK-------GWSVPNMVKFKTPMQ 166
Query: 268 GFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELV-------DSKTGEKHYFTGLFLCRPTG 320
+G W +P P + F+ PC++ + LV S + L +C P+
Sbjct: 167 ALSGNW-----DPYPIDMAFQPPCMVLSTIGLVKPGKLDGSSTASCSKHLHQLHVCMPSS 221
Query: 321 QGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMK 371
+GK+ L+ R+ T + + + + A++V +D+ + Q + + +
Sbjct: 222 RGKTRLMYRWLWTLPNGRSMPYIDRVWTHLANQVLNEDLRLVEGQQDRMKR 272
>gi|443316742|ref|ZP_21046175.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
gi|442783653|gb|ELR93560.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
Length = 362
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 97/173 (56%), Gaps = 9/173 (5%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG 139
WY + +V D P G+T++ Q+IVL++D N +++ +DRCPHR +LS G++++G
Sbjct: 27 VNHWYAVARADEVTADKPRGVTLWQQKIVLFRDRNHQVQALEDRCPHRQVQLSHGEVVNG 86
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 199
+EC+YHGW+F+ G C +P L K+P + +R Y V+E G +WV+ + +
Sbjct: 87 EVECVYHGWRFDATGACTHVPYLGEAQKLP-TCTLRRYPVREQDGFIWVFPGDEARLAAE 145
Query: 200 KLPWFENFARPGFQDVSTIH-----ELPYDHSILLENLMDPAHIPISHDRTDW 247
K+ E A P + ++ I ++ +S L+ENLMD H + D W
Sbjct: 146 KI---EPLALPEWDHLNYIATVSLIDVESHYSFLIENLMDMYHGRLHDDLQAW 195
>gi|428312063|ref|YP_007123040.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428253675|gb|AFZ19634.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 353
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 97/179 (54%), Gaps = 11/179 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +V PLG+T++ Q IVLY+D +G + +DRCPHR KLS G +I RLE
Sbjct: 23 WYVVARSTEV-QTQPLGVTLWHQPIVLYRDNSGGVHALEDRCPHRQVKLSHGCVIGDRLE 81
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-----MSQKTPPN 197
C YHGWQF+ G+C +P L A+ K+P +RTY V E G +W++
Sbjct: 82 CHYHGWQFQSSGECAAVPYLAANQKLPNCK-IRTYPVHEQDGFIWLFPGDVETLHSAQIQ 140
Query: 198 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWT-AKREDAQ 255
P +P +E+ + ++ E +S L+ENLMD H + D WT A ED +
Sbjct: 141 PMGVPEWEHL---NYIATVSVIECKAHYSYLIENLMDMYHGHLHQDWQAWTDAVLEDIE 196
>gi|299471142|emb|CBN78999.1| cell death suppressor protein [Ectocarpus siliculosus]
Length = 501
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 158/377 (41%), Gaps = 62/377 (16%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL-IDGR 140
+WYP+ V + + + +V++++ G C+ DRCPHR A L+EG++ DG
Sbjct: 10 QWYPVLAADHVDSGRAHPVQLLGKNLVVWRNKGGRWSCFDDRCPHRAAPLTEGRIEDDGS 69
Query: 141 LECLYHGWQFEGEGKCVKIPQLP---ADAKIPRSACVRTYEVKESQGVVWVWM------- 190
L C YH W+F+ +GKC+ IPQ D P+ AC + Y + +Q ++WVW
Sbjct: 70 LLCAYHAWRFDADGKCLSIPQSDRGGKDEAQPK-ACAKVYPTQVAQDMIWVWAENGPDAG 128
Query: 191 --SQKTPPN-PDKLPWFENFARPGFQDVSTIH-ELPYDHSILLENLMDPAHIPISHDRTD 246
S TPP+ +L E A H +L Y ++EN +DPAH+P +H
Sbjct: 129 LESALTPPHLIPELDDKEGLASGRVVPQGVQHTDLAYGWDTMMENFVDPAHVPSAHHGVA 188
Query: 247 WTAKREDAQPLGFEVTER----TDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDS 302
+ +D +P+ FE+ + GF ++ E + N + F PC++ E D
Sbjct: 189 -GDRYKDVRPIDFELDKEWPVTATSGFRFKFDDEITD-THNKVTFVPPCLVL--VENADY 244
Query: 303 KTGEKHYFTGLFLCRPTGQGKSMLIVRFGAT-KRSPLAK--------------------- 340
K G+ PT G S L+ R K +P +K
Sbjct: 245 SGTLKLMLYGI----PTKPGWSRLVGRQAYVHKYAPKSKEAKALHKENKRLGKKTSGLLV 300
Query: 341 ------LFPKWYFHQNASKVFEQDMGFLSSQNEVL--MKETVPTKELYLNL----RSSDT 388
FP+W H + QDM FL Q + L + + Y N +D
Sbjct: 301 AARITSKFPQWLMHATSGIFLYQDMVFLHHQEKTLASVGYDGTSASSYSNAVYTPAPADR 360
Query: 389 WVAEYRKWMDKVGHGMP 405
V RKW+ G G P
Sbjct: 361 AVMAVRKWIATHGSGGP 377
>gi|238767610|dbj|BAH66644.1| chlorophyllide a oxygenase [Picocystis salinarum]
Length = 318
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 137/313 (43%), Gaps = 46/313 (14%)
Query: 110 YKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP 169
++D G+ C D CPHR LS G++IDG + C YHGW+ GEG CV +PQ+ +
Sbjct: 1 FRDQEGKAVCVHDECPHRACPLSIGKVIDGNIACPYHGWEVNGEGVCVNMPQVTPQVEAG 60
Query: 170 RSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIH-----ELPYD 224
R CV+ +E G++W+W + P P P + P ++H ++P +
Sbjct: 61 RP-CVQKLPCEEVGGMIWIWTGEDGIPIP---PVESDRLLPPTNKGFSLHAEIAMDVPVE 116
Query: 225 HSILLENLMDPAHIPISHDRT---DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPL 281
H +L+ENL+D AH P +H T W+ P R AG W EP
Sbjct: 117 HGLLIENLLDLAHAPFTHTSTFAKGWSV------PDLVNFQTAAARALAGNW-----EPY 165
Query: 282 PNFLRFEAPCVLQNNRELVDSKTGE--------KHYFTGLFLCRPTGQGKSMLIVR---- 329
P + FE PC+ + L E K++ + +C P G + L+ R
Sbjct: 166 PIDMSFEPPCMTLSTIGLAQPGKLESGVRQSQCKNHLHQMHVCLPAGPKSTRLLYRMHLD 225
Query: 330 -FGATKRSP-LAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSD 387
G K P + KL W + A +V +D+ + Q + L + +++ + D
Sbjct: 226 FLGWAKNVPGIQKL---WEYM--AGQVLGEDLRLVLGQQDRLER----GGDVWGHPVPYD 276
Query: 388 TWVAEYRKWMDKV 400
YR+W + +
Sbjct: 277 KLGVRYRRWRNSL 289
>gi|427729934|ref|YP_007076171.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427365853|gb|AFY48574.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 348
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 99/192 (51%), Gaps = 11/192 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +V + PLG+ ++ Q I LY+D G++ +DRCPHR KLS GQ+I+ LE
Sbjct: 23 WYVVARSSEVTN-RPLGIIIWHQAIALYRDSQGQIHALEDRCPHRQVKLSHGQVINDELE 81
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP-NPDKL 201
C YHGW+F +G+C +P L + K+P + +R Y VKE G +W++ P P L
Sbjct: 82 CAYHGWRFNHQGECATVPYLATNQKLP-NCTIRLYPVKEQDGFIWLFPGDGEPSVEPLGL 140
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWT-AKREDAQPLGFE 260
P +E+ + + +S L+ENLMD H + D W A ED E
Sbjct: 141 PEWEHL---NYIATVAVINCQAHYSYLIENLMDMYHGHLHQDLQAWAEATLEDID----E 193
Query: 261 VTERTDRGFAGR 272
R D + +
Sbjct: 194 DNHRVDAHYQAQ 205
>gi|257059007|ref|YP_003136895.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8802]
gi|256589173|gb|ACV00060.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8802]
Length = 362
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + ++ D PLG+T++D IVLY+D G++ +DRCPHR KLS+G++I LE
Sbjct: 24 WYVVARSTEIKDH-PLGVTIWDHSIVLYRDTLGKIHALEDRCPHRQVKLSDGKVIGNHLE 82
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP-PNPDKL 201
C YHGWQF +G C IP L K+P+ + +Y V+E G +W+++ + N D L
Sbjct: 83 CAYHGWQFNFQGTCHAIPYLNEKQKLPKCQ-INSYPVEELNGFIWLFLGDRQRFENNDIL 141
Query: 202 PWFENFARPGFQDVSTIH-----ELPYDHSILLENLMDPAHIPISHDRTDWT 248
P A P + ++ I E S L+ENLMD H + + WT
Sbjct: 142 P----LAMPEWDHLNYIATVSVIECRGHFSFLIENLMDMYHGHLHQNYQAWT 189
>gi|428201421|ref|YP_007080010.1| ring-hydroxylating dioxygenase, large terminal subunit [Pleurocapsa
sp. PCC 7327]
gi|427978853|gb|AFY76453.1| ring-hydroxylating dioxygenase, large terminal subunit [Pleurocapsa
sp. PCC 7327]
Length = 356
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 97/176 (55%), Gaps = 18/176 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +V D+ P+G+T++ Q IVLY+D G++ +DRCPHR KLS G++I LE
Sbjct: 23 WYVVARSTEVRDE-PIGVTLWHQAIVLYRDKTGKVHALEDRCPHRQVKLSHGKVIGNELE 81
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F EG CV +P L ++ K+P +R Y V+E G +W++ P + DKL
Sbjct: 82 CAYHGWRFNWEGNCVAVPYLASNQKLPNCK-IRRYPVRELDGFIWLF-----PGDLDKLD 135
Query: 203 WFENFARP---------GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTA 249
N +P + +I E +S L+ENLMD H + D W +
Sbjct: 136 --RNSIQPMGVPEWNHLNYIATVSIIECKGHYSFLIENLMDMYHGHLHDDYQAWAS 189
>gi|160897586|ref|YP_001563168.1| Rieske (2Fe-2S) domain-containing protein [Delftia acidovorans
SPH-1]
gi|160363170|gb|ABX34783.1| Rieske (2Fe-2S) domain protein [Delftia acidovorans SPH-1]
Length = 372
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 154/340 (45%), Gaps = 38/340 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ +V DAPLG+ + DQ +VL++D G +R + DRCPHR A+LS G++ +G LE
Sbjct: 44 WHPVAQAHEV-VDAPLGVQLLDQPLVLWRDPQGLVRVFVDRCPHRGARLSMGRVENGHLE 102
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ----KTPPNP 198
C YHGWQF G+CVK+P LP+ P S CV+ +E +E+ G+VWV ++ P
Sbjct: 103 CPYHGWQFADSGQCVKVPALPSFTP-PPSQCVKAFEAQEAYGLVWVRLATGEELSAVPAL 161
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHDRTDWTAKREDA 254
L F + ++ PYD + ++EN +D +H H+ W R DA
Sbjct: 162 AALAALPAFEAEADAHLRKLNCGPYDVAASAPRIIENFLDMSHFGFVHE--GWLGSR-DA 218
Query: 255 QPLGFEVTERTDRGFAGRWGKEKDEPLPNF-----------LRFEAP--CVLQNNRELVD 301
+ E T G G + +P N AP VL E
Sbjct: 219 TAIEAYAVETTATGVLAT-GCKAVQPQSNLHSTSAAEVEYTYEVTAPYAAVLTKLPESGT 277
Query: 302 SKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGF 361
++ G + LF+C T + + A SP A+L + +F QD
Sbjct: 278 TRAGWRESI-ALFICPVTPETSRVWFRLAVADFDSPDAQL------QEFQHTIFCQDQPV 330
Query: 362 LSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVG 401
L SQ + P E++ ++D + YR+++ G
Sbjct: 331 LESQQPKCLPLD-PRAEMH---SAADRMSSAYRRYLRASG 366
>gi|440683964|ref|YP_007158759.1| Rieske (2Fe-2S) iron-sulfur domain protein [Anabaena cylindrica PCC
7122]
gi|428681083|gb|AFZ59849.1| Rieske (2Fe-2S) iron-sulfur domain protein [Anabaena cylindrica PCC
7122]
Length = 363
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 95/166 (57%), Gaps = 6/166 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +V + PLG+ ++ Q I LY+D G++ +DRCPHR +LS GQ+ +LE
Sbjct: 30 WYVVARSSEV-TNKPLGVIIWKQAIALYRDHTGKVHALEDRCPHRQVQLSHGQVKGNQLE 88
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP-NPDKL 201
C YHGW+F G+CV +P L A+ K+P + +R Y VKE G +W++ S P P L
Sbjct: 89 CNYHGWRFNSNGECVAVPYLAANQKLP-TCQIRHYPVKEQDGFIWLFPSDIEPSIEPMGL 147
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDW 247
P +E+ VS I+ + +S L+ENLMD H + D W
Sbjct: 148 PEWEHLNY--IATVSVINTQAH-YSYLIENLMDMYHGHLHQDLQAW 190
>gi|5478805|dbj|BAA82483.1| chlorophyll b synthase [Prochloron didemni]
Length = 276
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 126/293 (43%), Gaps = 38/293 (12%)
Query: 90 KDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQ 149
++V P+ +FD+ +L++D N + C DRC HR LS G++++GR++C YHGW+
Sbjct: 1 QNVNTTTPMPFELFDRSWILFRDRNSNIGCIHDRCAHRACTLSLGKVVNGRVQCAYHGWE 60
Query: 150 FEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL-PWF-ENF 207
+ EG C +P A V+ E G++WVW P KL P ENF
Sbjct: 61 YNTEGTCEVMPSCKQT-----KAAVKALPAIEQSGMIWVWPGSGVPGELPKLAPAIPENF 115
Query: 208 ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDR 267
EL +H + +ENL+D AH P +H T + P
Sbjct: 116 TL----QAEITMELDVEHGLFMENLLDLAHAPFTHTG---TFAKGWPVPDFVRFANLPKT 168
Query: 268 GFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLI 327
G W +P P + FE PC + + L G + + +C P G+GK+ L+
Sbjct: 169 PLTGHW-----DPYPIDMSFEPPCYVISTIGLRGRDCGR--HLHQVHVCLPKGKGKTRLL 221
Query: 328 VRFGATKRSPLAKLFPKW---------YFHQNASKVFEQDMGFLSSQNEVLMK 371
R LA F KW ++ A +V +D+ + Q + L +
Sbjct: 222 YR--------LALDFYKWLRFVPGMNLFWEHMAQRVIGEDIRLVRGQQKSLQE 266
>gi|333916146|ref|YP_004489878.1| Rieske (2Fe-2S) domain-containing protein [Delftia sp. Cs1-4]
gi|333746346|gb|AEF91523.1| Rieske (2Fe-2S) iron-sulfur domain protein [Delftia sp. Cs1-4]
Length = 338
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 153/343 (44%), Gaps = 41/343 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ +V D APLG+ + DQ +VL++D G +R + DRCPHR A+LS G++ +G LE
Sbjct: 7 WHPVAQAHEVVD-APLGVQLLDQPLVLWRDPQGLVRVFVDRCPHRGARLSMGRVENGHLE 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ-------KTP 195
C YHGWQF G+CVK+P LP+ P S CV+ +E +E+ G+VWV ++
Sbjct: 66 CPYHGWQFADSGQCVKVPALPSFTP-PPSQCVKAFEAQEAYGLVWVRLATGEELSAVPAL 124
Query: 196 PNPDKLPWFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHDRTDWTAKR 251
L F + ++ PYD + ++EN +D +H H+ W R
Sbjct: 125 AALAALAALPAFEAEADAHLRKLNCGPYDVAASAPRIIENFLDMSHFGFVHE--GWLGSR 182
Query: 252 EDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNF-----------LRFEAP--CVLQNNRE 298
DA + E T G G + +P N AP VL E
Sbjct: 183 -DATAIEAYAVETTATGVLAT-GCKAVQPQSNLHSTSAAEVEYTYEVTAPYAAVLTKLPE 240
Query: 299 LVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQD 358
+K G + LF+C T + + A SP A+L + +F QD
Sbjct: 241 SGTTKAGWRESI-ALFICPVTPETSRVWFRLAVADFDSPDAQL------QEFQHTIFCQD 293
Query: 359 MGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVG 401
L SQ + P E++ ++D + YR+++ G
Sbjct: 294 QPVLESQQPKCLPLD-PRAEMH---SAADRMSSAYRRYLRASG 332
>gi|384249736|gb|EIE23217.1| Rieske-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 480
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 115/449 (25%), Positives = 186/449 (41%), Gaps = 95/449 (21%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL-- 136
WT+ WYPL + +D+ P + + +V+++D + + RC++D CPHRLA LS+G++
Sbjct: 8 WTKHWYPLAVVEDLNPQKPFATKLLGKDLVIWQDADKQWRCFEDICPHRLAPLSQGRIEP 67
Query: 137 IDGRLECLYHGWQFEGEGKCVKIPQLPADAK-------IPRSACVRTYEVKESQGVVWVW 189
DG L+C YHGW+F G G + IPQ D+ + +CV TY V+ G+VWVW
Sbjct: 68 SDGSLQCSYHGWRFGGSGAAIAIPQAAHDSPQSERTSLASKRSCVATYPVQVQLGLVWVW 127
Query: 190 MSQKTPPNPDKLPWFENFA-RPGF---------QDVST------IHELPYDHSILLENLM 233
P + E+ A +P +DV+ + + P + IL EN+
Sbjct: 128 ------PESGPHAFIESSAEQPALNQRVKEVAPEDVALTTNQNFVRDFPVAYDILFENIS 181
Query: 234 DPA---HIPISHDRTD---WTAKREDAQPLG--FEVTE-RTDRG------FAGRWGKEKD 278
D A H ++ + WT A FEVT D+G + W +
Sbjct: 182 DQARHCHYTLTSFASMFLLWTVLSHLASQWANHFEVTNLNKDKGPGDAYTYDLEWSPDAI 241
Query: 279 EPLPNF-LRFEAPCVLQNNRELVDSKTGEKHYFTGL-FLCRPTGQGKSMLIVRFGATKRS 336
+P N ++ P ++ D K FT L F P + + +I A
Sbjct: 242 KPPINQKVKGVPPAYIEYFTPKEDGK------FTALWFYVIPLDEHSTRVINH--AVVVQ 293
Query: 337 PLAKLF-------PKWYFHQNASKVFEQDMGFLSSQNEVLMKE----TVPTKELYLNLRS 385
PL KL P+W H +++F+ DM +L+ + + ++ YL R+
Sbjct: 294 PLPKLVKVLAAARPRWIDHLLLNEIFDGDMAYLAQASANSKRRDGFGNSWAQDYYLPARA 353
Query: 386 SDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGT 445
+ V +RKW K G G + A ++PA
Sbjct: 354 DGS-VLGWRKWYHKQGGGGFWE-----------------------ASGREATPAP----V 385
Query: 446 MHAPNLANRYFRHVIHCKGCSSVIKAFST 474
+ L +RY +H +C CS ++ T
Sbjct: 386 LTREQLLDRYHQHTQNCPACSKALQQLRT 414
>gi|338534630|ref|YP_004667964.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
gi|337260726|gb|AEI66886.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
Length = 332
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 84/167 (50%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
W WY + + + + PLGL +++VL++D GE C CPHR A L G++
Sbjct: 13 QWAAHWYAVARSPALGRERPLGLQRLGRRLVLWRDAAGEAHCADAACPHRGADLGLGRVR 72
Query: 138 DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN 197
+G LEC YHG+++EG G C+ +P DAK R+ +R + V+E+ G +W W+ +
Sbjct: 73 EGALECPYHGFRYEGGGACLAMPCEGRDAKPSRALALRVHPVREAHGFIWAWLGGQARAP 132
Query: 198 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 244
LPW P S + ++E +MD H P +H R
Sbjct: 133 LPPLPWLAGAPEPAANSASVEEVWGARFTRVMEGMMDLHHFPFAHRR 179
>gi|427724958|ref|YP_007072235.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Leptolyngbya
sp. PCC 7376]
gi|427356678|gb|AFY39401.1| Rieske (2Fe-2S) iron-sulfur domain protein [Leptolyngbya sp. PCC
7376]
Length = 363
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L+++V D P GLT++ ++ VL++D G + +DRCPHR KLS GQ++ RLE
Sbjct: 29 WYVAALSREVIDQ-PFGLTLWKEKFVLFRDRQGSVHALEDRCPHRQVKLSSGQVVGDRLE 87
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQF+ EG C +P L + + P +R+ V+E G +WV+ K+
Sbjct: 88 CAYHGWQFDAEGTCAHVPYLAENQRRPNCK-IRSLPVREQDGFIWVFPGDLETLEEQKIE 146
Query: 203 WFE--NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
F +A + ++ + S L+ENLMD H + +D W + + + G E
Sbjct: 147 PFSLPEWAHLNYIVTVSVIDCEGHFSYLIENLMDMYHGHLHNDYQAWASAKLE----GLE 202
Query: 261 VTE-RTDRGFAGR 272
+E R D + +
Sbjct: 203 SSEMRVDAHYEAQ 215
>gi|75908048|ref|YP_322344.1| Rieske (2Fe-2S) protein [Anabaena variabilis ATCC 29413]
gi|75701773|gb|ABA21449.1| Rieske (2Fe-2S) region [Anabaena variabilis ATCC 29413]
Length = 347
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 100/192 (52%), Gaps = 11/192 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +++V + PLG+T++ Q I LY+D G++ +DRCPHR KLS GQ+I LE
Sbjct: 23 WYVVARSQEVTN-KPLGVTLWHQAIALYRDSEGQIHALEDRCPHRQVKLSHGQVIGNELE 81
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP-NPDKL 201
C YHGW+ G+C +P L + K+P +R Y VKE G +W++ P P L
Sbjct: 82 CAYHGWRLNHHGECAAVPYLAENQKLPNCK-IRHYPVKEQDGFIWLFPGDGEPSIEPMGL 140
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWT-AKREDAQPLGFE 260
P +++ + I +S L+ENLMD H + D W A+ +D + E
Sbjct: 141 PEWDHL---NYIASVAIINCQAHYSYLIENLMDMYHGHLHQDLQAWAQAELQDIE----E 193
Query: 261 VTERTDRGFAGR 272
ER D + +
Sbjct: 194 TDERVDAHYQAQ 205
>gi|299532048|ref|ZP_07045443.1| Rieske iron-sulfur protein [Comamonas testosteroni S44]
gi|298719963|gb|EFI60925.1| Rieske iron-sulfur protein [Comamonas testosteroni S44]
Length = 324
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 125/251 (49%), Gaps = 31/251 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ + +V AP + + +Q +VL+++ G ++ + DRCPHR A+LS G++ +G LE
Sbjct: 7 WHPVAQSSEVVS-APFSVLLLEQPLVLWRNAEGLVQSFVDRCPHRGARLSMGRVENGHLE 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQF G+CVK+P +P D P S VR +EV+E+ G++WV + P+ +LP
Sbjct: 66 CPYHGWQFSSGGQCVKVPAVP-DFTPPASQRVRAFEVQEAYGLIWV----RLEPSDSQLP 120
Query: 203 WFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
FA + + ++ PYD + ++EN +D +H H+ W R DA +
Sbjct: 121 ---VFAAETDEHLRKVNCGPYDVAASAPRIIENFLDMSHFGFVHE--GWLGSR-DATAIA 174
Query: 259 FEVTERTDRGFAGRWGKEKDEPLPNFLRFEAP-------------CVLQNNRELVDSKTG 305
E T G G + +P N +A VL E SK G
Sbjct: 175 TYKVESTSTGVLAT-GCKAVQPQSNLHSTQAAEVEYTYEVTAAYTAVLTKIPEEGTSKQG 233
Query: 306 EKHYFTGLFLC 316
+ GLF+C
Sbjct: 234 WREQI-GLFIC 243
>gi|317053494|ref|YP_004118628.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Pantoea sp.
At-9b]
gi|316952599|gb|ADU72072.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pantoea sp. At-9b]
Length = 363
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 143/341 (41%), Gaps = 47/341 (13%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ ++++ D P + ++QIVL+++ ++ D C HR LS G+++DG +
Sbjct: 37 WHPVAYSEEI-QDQPYSSRLLNEQIVLWRNKENSIQAVADLCIHRGTALSIGKVVDGEIM 95
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F G+G C IPQ IP A V Y+ +E G+VWV + PD
Sbjct: 96 CPYHGWRFRGDGACTMIPQRENPRHIPDKARVTAYQAQERYGIVWVALDTPLWNIPD--- 152
Query: 203 WFENFARPGFQDVST-IHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
F P F +ST ++ D S LEN D H P H +R E
Sbjct: 153 -IPEFDEPEFHVISTGPYDWQSDASRQLENFTDFGHFPWVHTGLLGDPERVIVPKYQVET 211
Query: 262 TERTDR-----------GFAGRWGKEKDEPLP---NFLRFEAPCVLQNNRELVDSKTGEK 307
E R G A WG+EK + LP ++ P + ++ G
Sbjct: 212 DEHVMRYHFMRPEAPQAGKASVWGREKKDVLPVRHSYYELHLPYTI-----VLRQDWGGA 266
Query: 308 HYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNE 367
LF+ +P G+ KS +R T R+ Y H +V ++ + Q++
Sbjct: 267 DKMVHLFVSQPIGKDKSRAFLR---TARN---------YAHDQDPRVLQEFTDIVLDQDQ 314
Query: 368 VLMKETVP-------TKELYLNLRSSDTWVAEYRKWMDKVG 401
+++ P EL+L+ D YRK M G
Sbjct: 315 TIVESQRPEFVPFDLADELHLDF---DLVAINYRKLMRATG 352
>gi|418528828|ref|ZP_13094770.1| Rieske iron-sulfur protein [Comamonas testosteroni ATCC 11996]
gi|371454089|gb|EHN67099.1| Rieske iron-sulfur protein [Comamonas testosteroni ATCC 11996]
Length = 324
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 125/251 (49%), Gaps = 31/251 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ + DV AP + + +Q +VL+++ G ++ + DRCPHR A+LS G++ +G LE
Sbjct: 7 WHPVAQSSDVVS-APFSVLLLEQPLVLWRNAEGLVQSFVDRCPHRGARLSMGRVENGHLE 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQF G+CVK+P +P D P S V+ +EV+E+ G++WV + P+ +LP
Sbjct: 66 CPYHGWQFSSGGQCVKVPAVP-DFTPPASQRVQAFEVQEAYGLIWV----RLEPSDSQLP 120
Query: 203 WFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
FA + + ++ PYD + ++EN +D +H H+ W R DA +
Sbjct: 121 ---VFAAETDEHLRKVNCGPYDVAASAPRIIENFLDMSHFGFVHE--GWLGSR-DATAIA 174
Query: 259 FEVTERTDRGFAGRWGKEKDEPLPNFLRFEAP-------------CVLQNNRELVDSKTG 305
E T G G + +P N +A VL E SK G
Sbjct: 175 AYKVETTATGVLAT-GCKAVQPQSNLHSTQAAEVEYTYEVTAAYTAVLTKIPEEGSSKQG 233
Query: 306 EKHYFTGLFLC 316
+ GLF+C
Sbjct: 234 WREQI-GLFIC 243
>gi|108758573|ref|YP_631639.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
xanthus DK 1622]
gi|108462453|gb|ABF87638.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus
xanthus DK 1622]
Length = 330
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLID 138
W WY + + + PLG+ +++VL++D GE C CPHR A L G++
Sbjct: 13 WAAHWYAVARSPALGTGRPLGIQRLGRRLVLWRDAAGEAHCADAACPHRGADLGLGRVRQ 72
Query: 139 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
G LEC YHG+++ G G C+ +P DAK R +R + V+E+ G +W W+ + P +
Sbjct: 73 GALECPYHGFRYGGGGACLAMPCEGPDAKPSRGLALRMHPVREAHGFIWAWLGGRAPASL 132
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR 244
LPW + P + + ++E +MD H P +H R
Sbjct: 133 PALPWLADAPEPDSSSAAVEEVWNARFTRVMEGMMDLHHFPFAHRR 178
>gi|427707274|ref|YP_007049651.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Nostoc sp.
PCC 7107]
gi|427359779|gb|AFY42501.1| Rieske (2Fe-2S) iron-sulfur domain protein [Nostoc sp. PCC 7107]
Length = 350
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 94/168 (55%), Gaps = 6/168 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +V + P+G+ ++ Q I LY+D G++ +DRCPHR KLS GQ+I LE
Sbjct: 23 WYVVAPSHEVTHE-PVGVIIWHQAIALYRDSTGKIHALEDRCPHRQVKLSHGQVIGNELE 81
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN-PDKL 201
C YHGW+F G+C ++P L A+ K+P +R Y VKE G +W++ N P L
Sbjct: 82 CAYHGWRFNSSGECTEVPYLAANQKLPNCQ-IRRYPVKEQDGFIWLFPGDGEHSNQPLGL 140
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTA 249
P +E+ V+ I+ + +S L+ENLMD H + D W A
Sbjct: 141 PEWEHLNY--IASVAVINCQAH-YSYLIENLMDMYHGHLHQDLQAWAA 185
>gi|384252197|gb|EIE25673.1| hypothetical protein COCSUDRAFT_39968 [Coccomyxa subellipsoidea
C-169]
Length = 468
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 112/452 (24%), Positives = 172/452 (38%), Gaps = 87/452 (19%)
Query: 97 PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 156
P L + +Q+VL++DG + RC++D CPHR LSEG++ G L+C YHGW F +G+
Sbjct: 6 PHSLMLLGKQLVLWRDGEQQWRCFEDSCPHRKVPLSEGRVEQGGLQCGYHGWIFGSDGRP 65
Query: 157 VKIPQL-PADAKIPRSACVR------TYEVKESQGVVWVWMS----------QKTPP-NP 198
IPQL D K ++AC Y V+ QG++WVW Q+ P NP
Sbjct: 66 THIPQLHSVDTKAEQTACASGRSCAAAYPVQVQQGLIWVWGEHGSTAFLESLQRQPAINP 125
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
K + + V+ I +LP +EN+ D +H+ +H DA
Sbjct: 126 LKAKTEPDKFTQTY--VNYIRDLPGGFQEWVENMTDQSHVAFAHHGVAGNRHGPDAGYFK 183
Query: 259 FEVTERTDR-----GFAGRWGKEKDEPLPN-FLRFEAPCVLQNNRELVDSKTGEKHYFTG 312
E R F W N F P + + T F+
Sbjct: 184 SHSVEERPRPEDGFKFVFDWSANSKSVNKNTTFEFIPP--------VYNGFTVAGGVFSL 235
Query: 313 LFLCRPTGQGKSMLIVRFGATKRSP-------------LAKLFP-------------KWY 346
P + LI+ G P L K+ P +W
Sbjct: 236 WIYAVPVSATCTRLIINAGGNFPKPPPQKLTLTNPAALLKKVDPRPLLLQLVKRISGRWG 295
Query: 347 FHQNASKVFEQDMGFLSSQNEV--LMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGM 404
H + V + D+ F+ Q++ L Y SD V +R+W+ + G
Sbjct: 296 PHLQLNAVNDGDIVFMHQQSKTNRLAGRKADYNRHYFTPGDSDRGVMAWRRWLTQKAGGG 355
Query: 405 PYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKG 464
P + P PAV P + ++G +H L +R+ +H HC
Sbjct: 356 PVY--------PDTPAV---------------DPFRDSLGKLHRRELLDRHHQHTQHCAA 392
Query: 465 CSSVIKAFSTWKNSLS--VVAAALTVLAILAS 494
CS ++ + +L+ VAA L ++A L S
Sbjct: 393 CSKALQQVRAAQKALAGLCVAAFLGLVAFLGS 424
>gi|241765642|ref|ZP_04763595.1| Rieske (2Fe-2S) domain protein [Acidovorax delafieldii 2AN]
gi|241364522|gb|EER59599.1| Rieske (2Fe-2S) domain protein [Acidovorax delafieldii 2AN]
Length = 326
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 106/194 (54%), Gaps = 21/194 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI-DGRL 141
W+P+ L DV PL + +Q +VL++D +G ++ D+CPHR A+LS G++ DGRL
Sbjct: 7 WHPVALAVDVAQ-TPLAAQLLEQALVLWRDASGAVQALADQCPHRGARLSLGRVTADGRL 65
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
EC YHGWQF G G+C+ +P LP+ A P + C R + +E+ G+VWV M+ P +
Sbjct: 66 ECPYHGWQFAGGGQCMHVPALPSFAP-PATHCARHFAAREAHGLVWVRMA----PGDGAV 120
Query: 202 PWF--ENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHDRTDWTAKREDAQ 255
P F E+ AR + ++ PYD ++EN +D +H H+ W R+ A
Sbjct: 121 PTFAAEDDAR-----LRKLNCGPYDVEASAPRIIENFLDMSHFGFVHE--GWLGSRDAAS 173
Query: 256 PLGFEVTERTDRGF 269
+ V E T G
Sbjct: 174 IDDYRV-ESTATGL 186
>gi|260223404|emb|CBA33939.1| hypothetical protein Csp_B21530 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 346
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 95/174 (54%), Gaps = 14/174 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ + + DAPL +T+ +Q++VL++D G + D+CPHR AKLS G++ GRLE
Sbjct: 27 WHPVMASTSL-TDAPLAITLLEQELVLWRDATGSAHAWADQCPHRGAKLSLGRVCAGRLE 85
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQFE G+CV +P +PA P S V T+ V E+ G++WV Q P LP
Sbjct: 86 CPYHGWQFEAGGQCVHVPAVPAFVP-PASHAVSTHAVVEAYGLLWV---QLQPEAGVPLP 141
Query: 203 WFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHDRTDWTAKRE 252
F + V PYD + ++EN +D AH H+ W RE
Sbjct: 142 AFVAETDTQLRKVLCG---PYDVATSAPRIVENFLDMAHFGFVHE--GWLGMRE 190
>gi|218441166|ref|YP_002379495.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7424]
gi|218173894|gb|ACK72627.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 349
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 9/160 (5%)
Query: 97 PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 156
P+ +T++ Q+IV+Y+D G + +D CPHRL KLS+G ++ +EC YHGW+F GEGKC
Sbjct: 32 PISITLWYQKIVIYRDQAGMIHALEDSCPHRLVKLSQGAIVGNEIECAYHGWRFNGEGKC 91
Query: 157 VKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN-----PDKLPWFENFARPG 211
IP L + K+P +R+Y V+E G +WV+ K N P +P +E+
Sbjct: 92 TLIPYLNENQKLPPCQ-IRSYPVQELDGFIWVFPGDKNYLNQESVQPMGVPEWEHL---N 147
Query: 212 FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKR 251
+ +I + P S L+ENLMD H + + WT+ +
Sbjct: 148 YIATVSIIDCPSHFSFLIENLMDMYHGHLHDNYQAWTSAK 187
>gi|384247255|gb|EIE20742.1| hypothetical protein COCSUDRAFT_67210 [Coccomyxa subellipsoidea
C-169]
Length = 555
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 125/277 (45%), Gaps = 41/277 (14%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+ W WYP+ + DV P+ +T+ +++VL++ +GE C DRC HR A LSEG++
Sbjct: 82 FSWERNWYPVAILADVDGSKPIPVTLLGKKLVLWQGSDGEWNCVVDRCAHRYAPLSEGRV 141
Query: 137 IDGRLECLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 195
DG ++C YHGWQ+ G+G+C +IPQ A A SACV + V+ G VWVW
Sbjct: 142 KDGDIQCAYHGWQYNGQGQCTRIPQAEDASACCSSSACVEAFPVQLRAGAVWVWPDSSPS 201
Query: 196 PNPDK---LPWFENFARPGFQDVS-TIHELPYDHSILLENLMDPA--------------H 237
D LP + + V I + Y ++ L+E L+DP+ H
Sbjct: 202 AARDSSLVLPSVDTVLEESLEYVDWYIRDFYYGYAGLMEMLLDPSACSFTLHGIGLFNRH 261
Query: 238 IPISHDRTDWTAKREDAQPLGFEVTERTDRGFA-------GRWGKEKDEPLPNFLRFEAP 290
+PI D+ +P+ +TE G + R + P + F +P
Sbjct: 262 VPIPMDQ---------GKPMPSTLTECKTEGRSAVISMECARAFRPAGHPYDATVTFNSP 312
Query: 291 CVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLI 327
C + + D H G+++ P G+S L
Sbjct: 313 CHITH-----DFVGANGHVIHGMYIL-PVSPGRSRLF 343
>gi|16330819|ref|NP_441547.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
gi|383322561|ref|YP_005383414.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325730|ref|YP_005386583.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491614|ref|YP_005409290.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436881|ref|YP_005651605.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
gi|451814977|ref|YP_007451429.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
gi|1653312|dbj|BAA18227.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
gi|339273913|dbj|BAK50400.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
gi|359271880|dbj|BAL29399.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275050|dbj|BAL32568.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278220|dbj|BAL35737.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|451780946|gb|AGF51915.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
Length = 357
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 91/161 (56%), Gaps = 13/161 (8%)
Query: 96 APLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 155
PLG+ ++++ I +Y+D +G++R +DRCPHR KLSEG+++ LEC YHGWQF+ +G
Sbjct: 36 GPLGIVLWEKAIAIYRDQDGQVRAVEDRCPHRQVKLSEGKVLGNNLECAYHGWQFDAQGH 95
Query: 156 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWF--ENFARPGFQ 213
C KIP D K+P +RTY V+E G +W++ P + D L E A P +
Sbjct: 96 CAKIPYFSEDQKLP-PCRLRTYPVQEKDGFIWLY-----PGDLDHLASHGPEPLAIPEWH 149
Query: 214 DVSTI-----HELPYDHSILLENLMDPAHIPISHDRTDWTA 249
++ I + P S L+ENLMD H + + W +
Sbjct: 150 HLNHIGSFAAFDCPGHFSYLIENLMDMYHGHLHDNYQAWAS 190
>gi|158340878|ref|YP_001522046.1| hypothetical protein AM1_D0239 [Acaryochloris marina MBIC11017]
gi|158311119|gb|ABW32732.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 234
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 106/198 (53%), Gaps = 12/198 (6%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGEL-RCYQDRCPHRL 128
G + + W + W+P+ KD+ T+ +Q +V++ D + E R + D+CPHRL
Sbjct: 32 GGEDPSQFTWQDAWHPIAYVKDLDPSQLSTFTLLEQDLVIWWDQSAETWRVFADQCPHRL 91
Query: 129 AKLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS--ACVRTYEVKESQGV 185
A LSEG+L DG LEC YHGW F G G+C +IPQ + +S ACV++ QG+
Sbjct: 92 APLSEGRLTADGLLECPYHGWAFSGLGQCCRIPQQVGGQSVEQSRRACVQSLPTTVRQGM 151
Query: 186 VWVWMSQKTP----PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPIS 241
++V+ Q P P P E A + + + +LP+D LLEN++DP+H+P +
Sbjct: 152 LFVYPGQSERAAHIPIPLVAPLEE--APNKWIVLDGVRDLPFDVLTLLENVLDPSHLPFA 209
Query: 242 HDRTDWTAKREDAQPLGF 259
H R+ R A P+
Sbjct: 210 HHRS--VGDRSVAGPMDL 225
>gi|428182347|gb|EKX51208.1| hypothetical protein GUITHDRAFT_159336 [Guillardia theta CCMP2712]
Length = 469
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 156/365 (42%), Gaps = 47/365 (12%)
Query: 72 RQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAK 130
++ +++ ++WYPL + + + P + +F +V++ D + ++D CPHRLA
Sbjct: 21 QEALKFNFKKQWYPLAVIEFLDKKKPHHVQLFGNDLVMWYDKTSDKWNVFEDACPHRLAP 80
Query: 131 LSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQL---PADAKI-PRSACVRTYEVKESQGV 185
LSEG++ DG L C YHGW+F+ GKC IPQ A A + + AC +Y ++QG+
Sbjct: 81 LSEGRIEEDGTLLCSYHGWRFDANGKCTLIPQANEKQAQALMSSKRACALSYPAMQAQGL 140
Query: 186 VWVWMSQKTP----------PNPDKLPWFENFARPGF--QDVSTIHELPYDHSILLENLM 233
+WVW Q P +P + E+ G Q +I ++PY +EN++
Sbjct: 141 LWVWGEQGGPGSDAAIESALKSPALIAELEDPELKGRAQQLTWSIRDMPYGWDFFMENVL 200
Query: 234 DPAHIPISHDRTDWTAKREDAQPLGFEVTERT---DRGFAGRWGKEKDEPL--------- 281
DPAH+ +SH R + T R GFA +K PL
Sbjct: 201 DPAHVTVSHHGI--VGNRYTSPSFFRMQTTRNATAQGGFAHSITFDKSPPLGEGSDTVQE 258
Query: 282 ---PNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPL 338
P+ +R ++ L T K + C+ +G+ + A
Sbjct: 259 FLPPSMVRIKSRFPNGCQSLLALYATPTKPGYVRHIGCQVLVKGEDGAL----APGLGFF 314
Query: 339 AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMD 398
A PKW H AS QDM L Q ++L Y N++ D V +R W+
Sbjct: 315 ALPMPKWLNHVLASLFLHQDMVLLHHQEKILADAG------YRNMQ--DKGVTFFRNWLR 366
Query: 399 KVGHG 403
+G
Sbjct: 367 VFANG 371
>gi|428779892|ref|YP_007171678.1| ring-hydroxylating dioxygenase, large terminal subunit
[Dactylococcopsis salina PCC 8305]
gi|428694171|gb|AFZ50321.1| ring-hydroxylating dioxygenase, large terminal subunit
[Dactylococcopsis salina PCC 8305]
Length = 340
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 103/181 (56%), Gaps = 7/181 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +V P +T++ + IVLY+ +G++ +DRCPHR KLS G++ LE
Sbjct: 14 WYVVARSCEVTTQ-PHAVTLWKESIVLYRQNDGKICALEDRCPHRFVKLSAGEVQGNYLE 72
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-KL 201
C YHGWQF+ +GKC+ IP L K+PR +R Y V+E+ G +WV++ ++ P ++
Sbjct: 73 CAYHGWQFDDQGKCISIPYLTEKQKLPRCQ-LRRYPVQEADGFIWVFLGEENQNIPRFQI 131
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWT-AKREDAQPLGFE 260
P +++ + ++ E +S L+ENLMD H + D WT AK E+ + E
Sbjct: 132 PEWDHL---NYIATVSVIETQAHYSYLIENLMDMYHGHLHQDWQAWTDAKLENIKETDQE 188
Query: 261 V 261
V
Sbjct: 189 V 189
>gi|186682326|ref|YP_001865522.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186464778|gb|ACC80579.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 461
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 162/364 (44%), Gaps = 47/364 (12%)
Query: 74 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSE 133
+ + WT++WYP+ + P +T+ +++V+++D + + D CPH+LA+LS
Sbjct: 2 ITSFSWTKQWYPITPVSYLEPSYPTPMTLLGKKLVIWRDKHQKWVAMDDSCPHKLAQLSL 61
Query: 134 GQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVV 186
G + +G L C +HGW F+G GKC IP L +D K ++AC V TY + QG++
Sbjct: 62 GSINENGNLMCRHHGWCFDGAGKCTNIPML-SDEKALKAACNSERSQVTTYPTQVLQGLL 120
Query: 187 WVW-------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIP 239
W+W T P +P E+ D + E+P +++ +E+ DP+H
Sbjct: 121 WIWADNSPTAFKDSTSKQPALMP--ESQLDSSLTDW-FMSEVPVGYTVSVESSFDPSHAQ 177
Query: 240 ISHDRTDWTAKREDAQPLGFEVTER--TDRGFA------GRWGKEKDEPLPNFLRFEAPC 291
H + FEV + GF + K+ D +F PC
Sbjct: 178 FLHKGIAGFSPERAIPIQNFEVFGEISAEDGFTLEHSGYNIFNKDMDAT----RKFTPPC 233
Query: 292 VLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGA----TKRSPLAKLFPKWYF 347
+N G+ F F+ PT G I +F A K + +L PK+
Sbjct: 234 ---SNTTSYKYSNGKSALFQLYFV--PTKSGYCKQIGKFIADSLPQKGNFWFELLPKYLQ 288
Query: 348 ----HQNASKVFEQDMGFLSSQ--NEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVG 401
H ++ K+ QD+ + SQ NE ++ +T ++ Y +D + +RKW+D+
Sbjct: 289 TGLKHSSSYKLSNQDLSMMHSQAVNESVVNKT--WQKSYFMPSVADIGIVTFRKWLDEFA 346
Query: 402 HGMP 405
G P
Sbjct: 347 GGKP 350
>gi|407937805|ref|YP_006853446.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Acidovorax
sp. KKS102]
gi|407895599|gb|AFU44808.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Acidovorax
sp. KKS102]
Length = 327
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 15/175 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI-DGRL 141
W+P+ L++ V APL + + +Q +VL++D G + D+CPHR A+LS G++ G+L
Sbjct: 7 WHPVALSEAVAAQAPLAVQLLEQPVVLWRDSGGAVHALADQCPHRGARLSLGRVTPQGQL 66
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
EC YHGWQF G+C +P LP+ P + C R +E +E+ G+VWV + P L
Sbjct: 67 ECPYHGWQFAAGGQCTHVPALPSFVP-PATHCARHFETQEAYGMVWV----RIAPGEQGL 121
Query: 202 PWFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHDRTDWTAKRE 252
P FA G + ++ PYD + ++EN +D +H H+ W RE
Sbjct: 122 P---VFAAEGDARLRKLNCGPYDVAASAPRIIENFLDMSHFGFVHE--GWLGSRE 171
>gi|443324150|ref|ZP_21053095.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
gi|442796058|gb|ELS05383.1| ring-hydroxylating dioxygenase, large terminal subunit [Xenococcus
sp. PCC 7305]
Length = 334
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 101/188 (53%), Gaps = 9/188 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + K + P G + Q+IVL+ D +G+ DRC HR A+LS+G++IDG +
Sbjct: 13 WYPV-MPKSHLLEQPQGFELLGQKIVLWLDNSGQAVAAHDRCCHRSAQLSKGKIIDGNIT 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C+YHGWQF+ G CVK+PQL IP++ + TY +E G VWV + + P N +LP
Sbjct: 72 CIYHGWQFDSCGTCVKVPQLEDGKPIPKTYKIETYACQERYGYVWVCLGE--PLN--ELP 127
Query: 203 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
+ P F+ + +E + ++EN +D AH H T E P EV
Sbjct: 128 DIAEASDPSFRLIPEFYETWNCAGLRVMENELDLAHPTFVHTTT--FGSEEHPIPDAIEV 185
Query: 262 TERTDRGF 269
TE TD G
Sbjct: 186 TE-TDHGI 192
>gi|407961823|dbj|BAM55063.1| 3-chlorobenzoate-3,4-dioxygenase [Synechocystis sp. PCC 6803]
Length = 345
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 91/161 (56%), Gaps = 13/161 (8%)
Query: 96 APLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 155
PLG+ ++++ I +Y+D +G++R +DRCPHR KLSEG+++ LEC YHGWQF+ +G
Sbjct: 24 GPLGIVLWEKAIAIYRDQDGQVRAVEDRCPHRQVKLSEGKVLGNNLECAYHGWQFDAQGH 83
Query: 156 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWF--ENFARPGFQ 213
C KIP D K+P +RTY V+E G +W++ P + D L E A P +
Sbjct: 84 CAKIPYFSEDQKLP-PCRLRTYPVQEKDGFIWLY-----PGDLDHLASHGPEPLAIPEWH 137
Query: 214 DVSTI-----HELPYDHSILLENLMDPAHIPISHDRTDWTA 249
++ I + P S L+ENLMD H + + W +
Sbjct: 138 HLNHIGSFAAFDCPGHFSYLIENLMDMYHGHLHDNYQAWAS 178
>gi|221065631|ref|ZP_03541736.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
gi|220710654|gb|EED66022.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
Length = 324
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 124/251 (49%), Gaps = 31/251 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ + DV AP + + +Q +VL+++ G ++ + DRCPHR A+LS G++ +G LE
Sbjct: 7 WHPVAQSSDVVS-APFSVLLLEQPLVLWRNAEGLVQSFVDRCPHRGARLSMGRVENGHLE 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQF G+CVK+P +P D P S V+ +EV+E+ G++WV + P+ +LP
Sbjct: 66 CPYHGWQFSSGGQCVKVPAVP-DFTPPASQRVQAFEVQEAYGLIWV----RLEPSDSQLP 120
Query: 203 WFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
FA Q + ++ YD + ++EN +D +H H+ W R DA +
Sbjct: 121 ---VFAAETDQHLRKVNCGSYDVAASAPRIIENFLDMSHFGFVHE--GWLGSR-DATAIA 174
Query: 259 FEVTERTDRGFAGRWGKEKDEPLPNFLRFEAP-------------CVLQNNRELVDSKTG 305
E T G G + +P N +A VL E SK G
Sbjct: 175 AYKVESTATGVLAT-GCKAVQPQSNLHSTQAAEVEYTYEVTAAYTAVLTKIPEEGSSKQG 233
Query: 306 EKHYFTGLFLC 316
+ GLF+C
Sbjct: 234 WREQI-GLFIC 243
>gi|170690598|ref|ZP_02881765.1| Vanillate monooxygenase [Burkholderia graminis C4D1M]
gi|170145033|gb|EDT13194.1| Vanillate monooxygenase [Burkholderia graminis C4D1M]
Length = 352
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 84/169 (49%), Gaps = 14/169 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L+ +V DAPL T+ D+ +VLY+ G+ DRCPHR A LS G+++DG LE
Sbjct: 8 WYVAALSSEVTADAPLARTLLDEPVVLYRVAGGQAVALADRCPHRFAPLSRGRVVDGALE 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F EG+CV P D ++P A R Y V+E G +W W + LP
Sbjct: 68 CPYHGLRFGAEGRCVFNPH--GDGRVPARAEARHYPVRERYGAIWFWPGDPQRASNTPLP 125
Query: 203 WF------ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
F ENF + ++L D NL+D +H H T
Sbjct: 126 AFDYLDPQENFTSERYLHTHANYQLSAD------NLLDLSHFQYLHPET 168
>gi|238767622|dbj|BAH66650.1| chlorophyllide a oxygenase [Klebsormidium flaccidum]
Length = 322
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 154/333 (46%), Gaps = 52/333 (15%)
Query: 84 YPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLEC 143
YP+ +++V + + F++ V+++D +G+ C +D C HR LS G L+DG+++C
Sbjct: 1 YPVAFSENVDSKTMVPIDCFNEPWVIFRDQDGKAGCIRDECAHRACPLSLGALVDGKVQC 60
Query: 144 LYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDKL 201
YHGW++ G+C +P+ + P S VR E G++W+W K P PD
Sbjct: 61 PYHGWEYTTSGECT---HMPSTVQAPTS--VRALPCVEQDGMIWIWPGDKVPEATLPDLS 115
Query: 202 PWFENFARPGFQDVSTIH-----ELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
P G+ TIH E+P +H +L+ENL+D AH P +H T P
Sbjct: 116 P------PSGY----TIHAQITLEVPVEHGLLVENLLDLAHAPFTH-----TTTFAKGWP 160
Query: 257 LGFEVTERTDRGFA--GRWGKEKDEPLPNFLRFEAPCVLQNNRELVD----SKTGEK--- 307
+ V +T A G W +P P + F PC++ + L S T K
Sbjct: 161 VPNSVKFKTAAAAALSGFW-----DPYPIDMEFRPPCMVFSTIGLSQPGKLSGTNTKDCP 215
Query: 308 HYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQ----NASKVFEQDMGFLS 363
++ L +C P+ G + L+ R + + AK P + H+ A++V +D+ +
Sbjct: 216 NHLHQLHVCVPSKTGTTRLLYRM-SLDFAWWAKYVP--FIHKLWEYMANQVLSEDLRLVE 272
Query: 364 SQNEVLMKETVPTKELYLNLRSSDTWVAEYRKW 396
Q + +++ ++ + + D YR+W
Sbjct: 273 GQQDRMIR----GANVWNHPVAYDKLGVRYRRW 301
>gi|427739078|ref|YP_007058622.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
gi|427374119|gb|AFY58075.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
Length = 459
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 186/454 (40%), Gaps = 84/454 (18%)
Query: 76 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQ 135
++ WT++WYP+ + P +T+ +++V+++D + + D CPH+LA+LS G
Sbjct: 3 NFSWTKQWYPITPVSYLELLKPTPITLLGKKLVIWRDKHQQWIVMDDACPHKLAQLSLGS 62
Query: 136 LI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVVWV 188
+ DG L C +HGW F+G GKC IP L +D K +AC V TY +E QG++WV
Sbjct: 63 INEDGNLMCRHHGWCFDGMGKCTNIPML-SDEKALETACNSEKSKVTTYPTQELQGLLWV 121
Query: 189 WMSQK-------TPPNPDKLPWFENFARPGFQDVST----IHELPYDHSILLENLMDPAH 237
W T P +P ++ D S+ + E+P +++ +E+ DP+H
Sbjct: 122 WADNSSTAFEDCTLKQPATIPEYK-------LDTSSNDWFMSEVPVGYTVSVESTFDPSH 174
Query: 238 IPISHDRTDWTAKREDAQPLGFEVTE--RTDRGFAGR------WGKEKDEPLPNFLRFEA 289
H+ + FE + GF + + K+ D F
Sbjct: 175 AQFLHEGIAGFSPARAIAMKEFEAVGGISAEDGFTLKHSGYNIFNKDMDAT----RNFHP 230
Query: 290 PCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSP-----LAKLFPK 344
PC +N + + G+ F F+ P G I +F + P +L PK
Sbjct: 231 PC---SNTTIYEYPNGKSALFHLYFV--PIKPGYCRHIGKFISDAIPPQKGNFWMELLPK 285
Query: 345 WYF----HQNASKVFEQDMGFLSSQ--NEVLMKETVPTKELYLNLRSSDTWVAEYRKWMD 398
+ H + K+ QD+ + SQ NE M + + K Y +DT + +RKW+D
Sbjct: 286 YLQTGLKHSASYKLANQDLSMMHSQAVNES-MGDKIWQKS-YFMPSLADTGIVTFRKWLD 343
Query: 399 KVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRH 458
+ G P V+ P + L + + RH
Sbjct: 344 EFAGGKPEW------------QQVKETP----------------FQELSDEKLYDIWHRH 375
Query: 459 VIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAIL 492
HC C + K+ + AAL +LA++
Sbjct: 376 TKHCPSCRQSLVFIDKVKDLCQSLTAALVILALV 409
>gi|220908310|ref|YP_002483621.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7425]
gi|219864921|gb|ACL45260.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7425]
Length = 338
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 98/185 (52%), Gaps = 9/185 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D P T+ D+ +VL+ D G+ QDRC HR AKLS GQ+I+G +
Sbjct: 14 WYPVLPIAQL-QDGPKAFTLLDEPLVLWLDQEGKPAATQDRCCHRSAKLSIGQVIEGCIR 72
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F+ +G CV++PQ P D IP + Y +E G VWV + PP D +P
Sbjct: 73 CPYHGWEFDPQGACVRVPQHP-DRPIPSGYRINAYPCQERYGYVWVCLE---PPVQD-IP 127
Query: 203 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
F P ++ + E S+ L+EN +D AHIP H++T P +++
Sbjct: 128 EFAEATDPNYRLIPGFWETWQCSSLRLMENTLDIAHIPFVHNQT--FGDERSPVPPDYDL 185
Query: 262 TERTD 266
E TD
Sbjct: 186 IEETD 190
>gi|75215802|sp|Q9XJ38.1|CAO_DUNSA RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Flags: Precursor
gi|5478801|dbj|BAA82481.1| chlorophyll b synthase [Dunaliella salina]
Length = 463
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 148/359 (41%), Gaps = 42/359 (11%)
Query: 61 GPASAEERRGERQVADYDWTEE-WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRC 119
GP + RR + D WYP K + + +F VL++D + C
Sbjct: 111 GPKPKDSRRLRSSLELEDGLRNFWYPTEFAKKLEPGMMVPFDLFGVPWVLFRDEHSAPTC 170
Query: 120 YQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEV 179
+D C HR LS G++I+G ++C YHGW+F+G G C K+P ++ V
Sbjct: 171 IKDSCAHRACPLSLGKVINGHVQCPYHGWEFDGSGACTKMPS----TRMCHGVGVAALPC 226
Query: 180 KESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDV--STIHELPYDHSILLENLMDPAH 237
E G VWVW PP+ + A P DV + ++P +H +L+ENL+D AH
Sbjct: 227 VEKDGFVWVWPGDGPPPDLPP----DFTAPPAGYDVHAEIMVDVPVEHGLLMENLLDLAH 282
Query: 238 IPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVL---- 293
P +H T P+ V + AG W +P P + F PC+
Sbjct: 283 APFTH-----TTTFARGWPIPEAVRFHATKMLAGDW-----DPYPISMSFNPPCIALSTI 332
Query: 294 ---QNNRELVDSKTGE-KHYFTGLFLCRPTGQGKSMLIVR-----FGATKRSPLAKLFPK 344
Q + + K E K + L +C P+ +G + L+ R +G K P +
Sbjct: 333 GLSQPGKIMRGYKAEECKRHLHQLHVCMPSKEGHTRLLYRMSLDFWGWAKHVPFVDVL-- 390
Query: 345 WYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
+ + A +V +D+ + Q + + + + D YR+W + V G
Sbjct: 391 --WKKIAGQVLGEDLVLVLGQQARM----IGGDDTWCTPMPYDKLAVRYRRWRNMVADG 443
>gi|307110738|gb|EFN58973.1| hypothetical protein CHLNCDRAFT_137587 [Chlorella variabilis]
Length = 432
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 159/377 (42%), Gaps = 44/377 (11%)
Query: 73 QVAD--YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL-YKDGNGELRCYQDRCPHRLA 129
Q AD ++W ++WYPL + P TV +++V+ Y + + R +DR PHRLA
Sbjct: 14 QPADDQFNWQQQWYPLAPVSYLDRAKPTPYTVLGRRLVVWYHAPSQQWRALEDRWPHRLA 73
Query: 130 KLSEGQL--IDGRLECLYHGWQFEGEGKCVKIPQL-----PADAKIPRSACVRTYEVKES 182
LSEG++ G L+C YHGWQF G+G+C IPQ A A + +CV + V++
Sbjct: 74 PLSEGRIEPASGNLQCSYHGWQFGGDGRCASIPQADSPQQEATACGSQRSCVAAFPVRQE 133
Query: 183 QGVVWVWM---------SQKTP-PNP-DKLPWFENFARPGFQDVSTIH--ELPYDHSILL 229
QG++WVWM SQ P P P + L + A P + + ELP LL
Sbjct: 134 QGMLWVWMEAGPGAAAASQLRPLPLPAELLSSGGDGATPAGSLLGGWYQRELPLSAEYLL 193
Query: 230 ENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKE------KDEPLPN 283
ENL+DP+HI +H + R + PL + GF ++ +
Sbjct: 194 ENLLDPSHIHFAHSGVIGSPSRAGSIPLHLAGPLTSQGGFQLHMDRQWQGRAGRQGGRGQ 253
Query: 284 FLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSP------ 337
E P ++ +G T G S + + AT P
Sbjct: 254 QQAREIPGLVDLGEAAPAGGSGSVPAVTRFVPPGLVCPGTSRVFTAYSATGLPPVLQSAL 313
Query: 338 ----LAKLFPKWYFHQN--ASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVA 391
LA L + F + A +V + D + Q + +E + Y ++D V
Sbjct: 314 RSDALAPLLHAFQFLADLGAHQVIDGDAVHIHQQERTVRQE---GRRSYFMPAAADRGVM 370
Query: 392 EYRKWMDKVGHGMPYHF 408
+W+D+ G P +F
Sbjct: 371 LLHRWLDEYAGGGPQYF 387
>gi|365097945|ref|ZP_09331712.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Acidovorax
sp. NO-1]
gi|363413190|gb|EHL20398.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Acidovorax
sp. NO-1]
Length = 326
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 163/347 (46%), Gaps = 61/347 (17%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI-DGRL 141
W+P+ L DV AP+ + + +Q +V+++D G ++ + D+CPHR A+LS G++ G+L
Sbjct: 7 WHPVALVGDVAQ-APVAVQLLEQPVVVWRDAAGAVQAFADQCPHRGARLSLGRVTPQGQL 65
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
EC YHGWQF G+C +P LPA P C R +E +E+ G+VWV M Q T L
Sbjct: 66 ECPYHGWQFASGGRCTHVPALPAFVP-PPGHCARAFEAREAHGLVWVRMEQGT----TAL 120
Query: 202 PWFENFARPGFQDVSTIHEL---PYDHSI----LLENLMDPAHIPISHDRTDWTAKREDA 254
P F+ +D + + +L PYD + ++EN +D +H H+ W R DA
Sbjct: 121 PAFKA------EDDARLRKLNCGPYDVAASAPRIIENFLDMSHFGFVHE--GWLGSR-DA 171
Query: 255 QPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL------VDSKTGEK- 307
+ E T G G + +P N L AP ++ E+ V +K E
Sbjct: 172 TAIDDYRVEATPTGLLAN-GCKAWQPQSN-LHSTAPAQVEYAYEVTAPYAAVLTKVPEAG 229
Query: 308 -------HYFTGLFLCRPTGQGKSMLIVRFG-ATKRSPLAKLFPKWYFHQNASKVFEQDM 359
LF+C P +S + R A SP KL + + H +F QD
Sbjct: 230 TTAVDGWRESIALFIC-PVTPVRSRVWFRLAVADFESPDEKL--QAFQH----TIFTQDQ 282
Query: 360 GFLSSQNEVLMKETVPTKELYLNLR-----SSDTWVAEYRKWMDKVG 401
L SQ VP + L L+LR ++D + YR+++ + G
Sbjct: 283 PVLESQ--------VP-QCLPLDLRAELHTAADKASSAYRRFLRQSG 320
>gi|307110739|gb|EFN58974.1| hypothetical protein CHLNCDRAFT_137589 [Chlorella variabilis]
Length = 510
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 156/372 (41%), Gaps = 42/372 (11%)
Query: 76 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL-YKDGNGELRCYQDRCPHRLAKLSEG 134
++W ++WYPL + P TV +++V+ Y + + R +DR PHRL LSEG
Sbjct: 19 QFNWQQQWYPLAPVSYLDRAKPTPYTVLGRRLVVWYHAPSQQWRALEDRWPHRLVPLSEG 78
Query: 135 QL--IDGRLECLYHGWQFEGEGKCVKIPQL-----PADAKIPRSACVRTYEVKESQGVVW 187
++ G L+C YHGWQF G+G+C +IPQ A A + +CV + V++ QG++W
Sbjct: 79 RIEPGSGNLQCSYHGWQFGGDGRCARIPQADSPQQEAAACGSQRSCVAAFPVRQEQGMLW 138
Query: 188 VWM---------SQKTP-PNP-DKLPWFENFARPGFQDVSTIH--ELPYDHSILLENLMD 234
VWM SQ P P P + L + A P + + ELP LLENL+D
Sbjct: 139 VWMEAGPGAAAASQLRPLPLPAELLSSGGDGATPAGSLLGGWYQRELPLSAEYLLENLLD 198
Query: 235 PAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKE------KDEPLPNFLRFE 288
P+HI +H + R + PL + GF ++ + E
Sbjct: 199 PSHIHFAHSGVIGSPSRAGSIPLHLAGPLTSQGGFQLHMDRQWQGRAGRQGGRGQQQARE 258
Query: 289 APCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSP----------L 338
P ++ +G T G S + F AT P L
Sbjct: 259 IPGLVDVGEAAPAGGSGSVPAVTRFVPPGLVCPGTSRVFTAFFATGLPPVLQSALRSDAL 318
Query: 339 AKLFPKWYFHQN--ASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKW 396
A L + F + A +V + D + Q + +E + Y ++D V +W
Sbjct: 319 APLLHAFQFLADLGAHQVIDGDAVHIHQQERTVRQE---GRRSYFMPAAADRGVMLLHRW 375
Query: 397 MDKVGHGMPYHF 408
+D+ G P +F
Sbjct: 376 LDEYAGGGPQYF 387
>gi|238767604|dbj|BAH66641.1| chlorophyllide a oxygenase [Pyramimonas parkeae]
Length = 264
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 124/267 (46%), Gaps = 30/267 (11%)
Query: 112 DGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS 171
D +G C +D C HR LS GQ++DG++EC YHGW + G+C K+P + +
Sbjct: 1 DADGIAACVKDECAHRACPLSLGQVVDGQVECPYHGWAYNRGGECTKMPS----TRYCKG 56
Query: 172 ACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD-VSTIHELPYDHSILLE 230
V++ V+E G++WVW P ++P F A GF + ++P +H +L+E
Sbjct: 57 VGVKSLTVQEQDGLIWVWPGGAEPTT--EVPRFH--APEGFTTHAELMLDVPVEHGLLIE 112
Query: 231 NLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAP 290
NL+D AH P +H T AK L V + + G W +P P + FEAP
Sbjct: 113 NLLDLAHAPFTHTST--FAKGWSIPEL---VNIKMNGALVGNW-----DPYPIDMSFEAP 162
Query: 291 CVLQNNRELVDSKTGEK--------HYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF 342
C+ + L EK + + +C P+ +G + L+ R A P +
Sbjct: 163 CITLSTIGLARPGQVEKGLRAEDCPKHLYQMHVCLPSKKGHTRLLYRM-ALDFMPWVQYV 221
Query: 343 P--KWYFHQNASKVFEQDMGFLSSQNE 367
P + Q A++V +D+ + Q E
Sbjct: 222 PFINSVWQQMANQVLGEDLRLVLGQQE 248
>gi|218245961|ref|YP_002371332.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 8801]
gi|218166439|gb|ACK65176.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 8801]
Length = 362
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + ++ D PLG+T++D IVLY+D G++ ++RCPHR KLS+G++I LE
Sbjct: 24 WYVVAGSTEIKD-RPLGVTIWDHSIVLYRDTLGKIHALENRCPHRQVKLSDGKVIGNHLE 82
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ-KTPPNPDKL 201
C YHGWQF +G C IP L K+P+ + +Y V+E G +W+++ + N D L
Sbjct: 83 CAYHGWQFNSQGTCHSIPYLNEKQKLPKCQ-INSYPVEELNGFIWLFLGDPQRLENNDIL 141
Query: 202 PWFENFARPGFQDVSTIH-----ELPYDHSILLENLMDPAHIPISHDRTDWT 248
P A P + ++ I E S ++ENLMD H + + WT
Sbjct: 142 P----LAIPEWDHLNYIATVSVIECRGHFSFVIENLMDMYHGHLHQNYQAWT 189
>gi|264679811|ref|YP_003279720.1| Rieske iron-sulfur protein [Comamonas testosteroni CNB-2]
gi|262210326|gb|ACY34424.1| Rieske iron-sulfur protein [Comamonas testosteroni CNB-2]
Length = 324
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 124/251 (49%), Gaps = 31/251 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ + +V AP + + +Q +VL+++ G ++ + DRCPHR A+LS G++ +G LE
Sbjct: 7 WHPVAQSSEVVS-APFSVLLLEQPLVLWRNAEGLVQSFVDRCPHRGARLSMGRVENGHLE 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQF G+CVK+P +P D P S VR +EV+E+ G++WV + + +LP
Sbjct: 66 CPYHGWQFSSGGQCVKVPAVP-DFTPPASQRVRAFEVQEAYGLIWVRLES----SDSQLP 120
Query: 203 WFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
FA + + ++ PYD + ++EN +D +H H+ W R DA +
Sbjct: 121 ---VFAAETDEHLRKVNCGPYDVAASAPRIIENFLDMSHFGFVHE--GWLGSR-DATAIA 174
Query: 259 FEVTERTDRGFAGRWGKEKDEPLPNFLRFEAP-------------CVLQNNRELVDSKTG 305
E T G G + +P N +A VL E SK G
Sbjct: 175 TYKVESTSTGVLAT-GCKAVQPQSNLHSTQAAEVEYTYEVTAAYTAVLTKIPEEGTSKQG 233
Query: 306 EKHYFTGLFLC 316
+ GLF+C
Sbjct: 234 WREQI-GLFIC 243
>gi|325293910|ref|YP_004279774.1| vanillate O-demethylase oxygenase [Agrobacterium sp. H13-3]
gi|325061763|gb|ADY65454.1| vanillate O-demethylase oxygenase subunit [Agrobacterium sp. H13-3]
Length = 346
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 100 LTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 159
+T+ + IVLY+ NG+L +D CPHR LS G++ +EC YHG F+ G C ++
Sbjct: 23 VTMLGENIVLYRLQNGKLAALEDACPHRKLPLSMGRIKGDDVECGYHGLTFDCSGACTRV 82
Query: 160 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 218
P +IP ACVR+Y V+E G+VWVWM + +P ++ E+F P + +
Sbjct: 83 ---PGAERIPHVACVRSYPVEERYGLVWVWMGEAAKADPAEIFHVEHFGDPSWGVNRGES 139
Query: 219 HELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKD 278
+ ++ + +NL+DP+H+ H ++ + + + PL E T ++D RW + D
Sbjct: 140 MTINCNYLYMTDNLLDPSHVAWVH-QSSFASSACEETPL--ETTVKSDGVVVWRWMLDSD 196
Query: 279 EPLP---NFLRFEAPCVLQNNREL 299
P P FL+FE C + + E+
Sbjct: 197 -PAPFYAPFLQFEGKCDRKQHYEV 219
>gi|298709173|emb|CBJ31116.1| Pheophorbide a oxygenase, putative chloroplast precursor
[Ectocarpus siliculosus]
Length = 532
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 24/213 (11%)
Query: 75 ADYDWTEEWYPLYLTKDVPDD---APLGLTVFDQQIVLYKD-GNGELRCYQDRCPHRLAK 130
A + W +WYP+ + +D+ P + + + +V++KD +G + + DRCPHR A
Sbjct: 38 AGFQWRRQWYPVAVMRDLEARDPRMPYPVQLMGEGLVVWKDPKDGGWKAFADRCPHRWAP 97
Query: 131 LSEGQLID--GRLECLYHGWQFEGEGKCVKIPQLPAD----AKIPRSACVRTYEVKESQG 184
LSEG++ GRL+C+YHGW+FEG+GKC IPQ A+ + AC K +G
Sbjct: 98 LSEGRVDQESGRLQCIYHGWEFEGDGKCGSIPQATPGSRETAQNSKRACATAIPTKVVEG 157
Query: 185 VVWVW---------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDP 235
+W+W S+ PP +P +F F +L Y L+ENL DP
Sbjct: 158 KLWLWPDPSPEGVKESETVPPA--TVPGL-DFGSGDFGGNWYCRKLAYGFDTLIENLADP 214
Query: 236 AHIPISHDRTDWTAKREDAQPLGFEVTERTDRG 268
AH+P +H R P+ E+ + G
Sbjct: 215 AHVPFAHHGV--MGSRAMGTPMAIEMDKEAGSG 245
>gi|170078842|ref|YP_001735480.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
7002]
gi|169886511|gb|ACB00225.1| Rieske [2Fe-2S] domain protein; synechoxanthin biosynthesis
[Synechococcus sp. PCC 7002]
Length = 367
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 96/173 (55%), Gaps = 22/173 (12%)
Query: 95 DAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 154
D PLG T++++ VLY+D G+++ +DRCPHR KLS GQ++ LEC YHGWQF+ G
Sbjct: 43 DQPLGFTLWNEDFVLYRDQAGQVQALEDRCPHRQVKLSSGQVVGDNLECAYHGWQFDASG 102
Query: 155 KCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQKTPPNPDKL----------PW 203
C +P L + K R AC +RT V+E G +WV+ P +P++L P
Sbjct: 103 TCAHVPYLAENQK--RPACKIRTLPVREQDGFIWVF-----PGDPERLTDEAIQPLPIPE 155
Query: 204 FENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDW-TAKREDAQ 255
+E+ V+TI + S L+ENLMD H + + W +AK ED Q
Sbjct: 156 WEHLNY--IVSVTTI-DCEGHFSYLIENLMDMYHGHLHDNYQAWASAKLEDIQ 205
>gi|418407591|ref|ZP_12980909.1| vanillate O-demethylase oxygenase subunit [Agrobacterium
tumefaciens 5A]
gi|358006735|gb|EHJ99059.1| vanillate O-demethylase oxygenase subunit [Agrobacterium
tumefaciens 5A]
Length = 346
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 109/204 (53%), Gaps = 11/204 (5%)
Query: 100 LTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 159
+T+ + IVLY+ NG+L +D CPHR LS G++ +EC YHG F+ G C ++
Sbjct: 23 VTMLGENIVLYRLQNGKLAALEDACPHRKLPLSMGRIKGDDVECGYHGLTFDCSGACTRV 82
Query: 160 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 218
P +IP ACVR+Y V+E G+VWVWM + +P ++ E+F P + +
Sbjct: 83 ---PGAERIPHVACVRSYPVEERYGLVWVWMGEAAKADPAEIFRVEHFGDPSWGVNRGES 139
Query: 219 HELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKD 278
+ ++ + +NL+DP+H+ H ++ + + + PL E T ++D RW + D
Sbjct: 140 MTINCNYLYMTDNLLDPSHVAWVH-QSSFASSACEETPL--ETTVKSDGVVVWRWMLDSD 196
Query: 279 EPLP---NFLRFEAPCVLQNNREL 299
P P FL+FE C + + E+
Sbjct: 197 -PAPFYAPFLQFEGKCDRKQHYEV 219
>gi|56752067|ref|YP_172768.1| hypothetical protein syc2058_d [Synechococcus elongatus PCC 6301]
gi|56687026|dbj|BAD80248.1| hypothetical protein [Synechococcus elongatus PCC 6301]
Length = 340
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 1/160 (0%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + D+ P+ ++ DQQ+V+Y+ G++ DRCPHR A L+ GQ+ +
Sbjct: 19 WYAIAASTDL-GSTPIAASLLDQQLVVYRTTAGQVVVLDDRCPHRGASLACGQVKGNAIA 77
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQF+ +G C +IP A A+IP++A V +Y V+E G++WV+ + L
Sbjct: 78 CPYHGWQFDLDGHCAQIPSQQASARIPQAAKVASYPVQERYGLIWVFTGDRDRAAQTPLW 137
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ + G++ V + D+ + EN MD AH P H
Sbjct: 138 ELPEYDQAGWRVVQGQFDWAADYRRVTENGMDVAHSPFVH 177
>gi|254414106|ref|ZP_05027874.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196179242|gb|EDX74238.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 357
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 8/204 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + V P + + +Q+ VLY++ +G++ +D+CPHR A LS G + DG L
Sbjct: 6 WYVCEFSSAV-TQKPKQILMLNQRFVLYRNSDGQVVALKDQCPHRGAALSLGWVEDGCLR 64
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F+ +GKC+ IP + IP+ A V +Y V+E G+VW++ P +P
Sbjct: 65 CPYHGWKFQADGKCIDIPANAPEIPIPKKARVDSYLVQEKYGLVWLFYGDLPPEKRPPIP 124
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
+ F P + + ++ ++ ++EN +D AH+ I H + E+ + ++V
Sbjct: 125 YLPEFTDPKMRSIVADVKVNNHYTRVIENALDLAHVYIVHGNSVGAGLTENPRIETYQVH 184
Query: 263 ERTDRGFAGRWGKEKDEPLPNFLR 286
E WG NF +
Sbjct: 185 EE-------EWGIRATTKFVNFTK 201
>gi|81300845|ref|YP_401053.1| hypothetical protein Synpcc7942_2036 [Synechococcus elongatus PCC
7942]
gi|81169726|gb|ABB58066.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 334
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 88/160 (55%), Gaps = 1/160 (0%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + D+ P+ ++ DQQ+V+Y+ G++ DRCPHR A L+ GQ+ +
Sbjct: 13 WYAIAASTDL-GSTPIAASLLDQQLVVYRTTAGQVVVLDDRCPHRGASLACGQVKGNAIA 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQF+ +G C +IP A A+IP++A V +Y V+E G++WV+ + L
Sbjct: 72 CPYHGWQFDLDGHCAQIPSQQASARIPQAAKVASYPVQERYGLIWVFTGDRDRAAQTPLW 131
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ + G++ V + D+ + EN MD AH P H
Sbjct: 132 ELPEYDQAGWRVVQGQFDWAADYRRVTENGMDVAHSPFVH 171
>gi|83317156|gb|ABC02752.1| chlorophyll synthase [Phyllostachys edulis]
Length = 541
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 148/337 (43%), Gaps = 45/337 (13%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++Q V+++ +G C Q+ C HR L G + GR++
Sbjct: 220 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNGGRIQ 279
Query: 143 CLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 199
C YHGW++ +GKC K+P + +I C E +G+VW+W P + P
Sbjct: 280 CPYHGWEYSTDGKCEKMPSTKMLNVRIQSLPCF------EQEGMVWIWPGDDPPKSTIPS 333
Query: 200 KLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
LP R GF + ELP H +LL+NL+D AH P + +T + + P
Sbjct: 334 LLP------RSGFTIHAEIVMELPVRHGLLLDNLLDTAHAPFT---LTFTFAKGWSVPSL 384
Query: 259 FEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL-----VDSKTGEK--HYFT 311
E + G W + + F PC++ + + ++ K+ ++ +
Sbjct: 385 VEFLAPSPL-LPGYWDLSQ-----MIVEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLH 438
Query: 312 GLFLCRPTGQGKSMLIVRFGAT-----KRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQN 366
L +C P+ + K+ L+ R K P L ++ A KV +D+ + Q
Sbjct: 439 QLHVCLPSSRNKTRLLYRMSLDFAPWLKHIPFMHLLWSYF----AEKVLNEDLRLVLGQQ 494
Query: 367 EVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
E ++ ++ S D YR+W D V G
Sbjct: 495 ERMINGA----NVWNWPVSYDKLGIRYRQWRDAVERG 527
>gi|91781025|ref|YP_556232.1| vanillate demethylase [Burkholderia xenovorans LB400]
gi|91693685|gb|ABE36882.1| Vanillate demethylase [Burkholderia xenovorans LB400]
Length = 353
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG-RL 141
WY ++D+ A LG T+ ++Q+VL++ +G + D CPHR A L G+++DG R+
Sbjct: 8 WYAAGWSQDLAAGAMLGRTMLNEQLVLFRADDGTVSALSDICPHRFAPLHLGKIVDGCRI 67
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
+C YH +F+G G CVK P KIP +A ++ Y V E ++WVWM ++ +P +
Sbjct: 68 QCAYHALEFDGTGACVKNPH--GKQKIPAAAKLQAYPVVEKHSLIWVWMGEQAAADPSVI 125
Query: 202 PWFENFA-RPGFQDVSTIHELPYDHS--ILLENLMDPAHIPISHD 243
P F GFQ VS L D S ++++NLMD +H HD
Sbjct: 126 PDFSMLDPDSGFQ-VSRRDWLHMDASYDLVVDNLMDLSHTAFLHD 169
>gi|428209012|ref|YP_007093365.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
gi|428010933|gb|AFY89496.1| Rieske (2Fe-2S) iron-sulfur domain protein [Chroococcidiopsis
thermalis PCC 7203]
Length = 351
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 59 LVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELR 118
+ P+ ++R RQ WY + +++V + P+ +T++ Q I +Y+ +G++
Sbjct: 1 MQNPSLTSQQRDIRQTGIN--PNHWYAVARSREVTTN-PIAVTLWHQAIAIYRGNDGKVY 57
Query: 119 CYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYE 178
+DRCPHR KLS G+++D LEC YHGW+ G G+CV +P L + K+P +R Y
Sbjct: 58 ALEDRCPHRQVKLSHGRVVDNNLECAYHGWRIAGNGECVDVPYLATNQKLPNCK-IRHYP 116
Query: 179 VKESQGVVWVWMSQK---TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDP 235
++E G VW++ + T P LP +++ + +I E +S L+ENLMD
Sbjct: 117 IREQDGFVWLFPGDRNLATQLQPLGLPEWDHL---NYIATVSIIECAAHYSYLIENLMDM 173
Query: 236 AHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGR 272
H H W A + +E R D + +
Sbjct: 174 YH---GHLHQSWQAWADPILQDIYEDEGRVDAHYQAQ 207
>gi|172039536|ref|YP_001806037.1| cell death suppressor protein [Cyanothece sp. ATCC 51142]
gi|354552200|ref|ZP_08971508.1| Pheophorbide a oxygenase [Cyanothece sp. ATCC 51472]
gi|171700990|gb|ACB53971.1| putative Rieske [2Fe-2S] domain-containing cell death suppressor
protein [Cyanothece sp. ATCC 51142]
gi|353555522|gb|EHC24910.1| Pheophorbide a oxygenase [Cyanothece sp. ATCC 51472]
Length = 461
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 159/355 (44%), Gaps = 29/355 (8%)
Query: 74 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSE 133
++ + W++ WYP+ + P +T+ +++V+++ N + D+CPH+LA+LS
Sbjct: 2 ISQFSWSQNWYPISPLSYLDPSVPTPITILGKKLVIWQTKNQQWVVMDDQCPHKLAQLSF 61
Query: 134 GQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVV 186
G++ DG L C +HGW F +G C KIP L + I ++AC V Y + QG++
Sbjct: 62 GKIQADGTLMCRHHGWCFNEQGNCTKIPMLVEEEAI-KTACNSSRSQVTVYPTQVKQGLL 120
Query: 187 WVW-MSQKTPPNPDKLPWFENFARPGFQDVST---IHELPYDHSILLENLMDPAHIPISH 242
WVW +Q+T +L G +T + E+P +++ LE+ DP+H H
Sbjct: 121 WVWPDNQETAFEDCQLKEPAIIPECGLDVTATDWHLSEVPVGYTVSLESSFDPSHAQFLH 180
Query: 243 DRTDWTAKREDAQPLGFEVTER--TDRGFAGRWGKEK--DEPLPNFLRFEAPCVLQNNRE 298
+ + + F+ + GF + ++ + +F PC N
Sbjct: 181 EGLAGFSPEKTIPITSFKTVSEISAEAGFTLKHSGYNIFNQDMEATRQFSPPCC---NTT 237
Query: 299 LVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRF----GATKRSPLAKLFPKW----YFHQN 350
+ G F+ PT G+ I +F ++++ + PK + H +
Sbjct: 238 IYRYPNGNMMLAQLYFI--PTEPGRCRYIGKFITSMNFSQKNIILDRLPKQLRTGFKHLS 295
Query: 351 ASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMP 405
++ +QD+ + +Q + M P + Y S+D + +R+W+D+ G P
Sbjct: 296 NYQLSDQDLTVMHAQETLQMTVEKPWHKSYFLPASADVGIITFRQWLDRFAGGKP 350
>gi|407713671|ref|YP_006834236.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
gi|407235855|gb|AFT86054.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
Length = 357
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +V D PL T+ D++IVL++D N DRCPHR A LS G+L G +
Sbjct: 8 WYVAAWDSEVLSDKPLARTLLDEKIVLFRDANNTAVALADRCPHRFAPLSMGELCQGNVR 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG QF +GKCV P + IP +A VR Y V E V+W+WM K+ + +P
Sbjct: 68 CSYHGLQFGSDGKCVHNPH--GNGIIPATAVVRAYPVVERYSVIWIWMGDKSKADDALIP 125
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
+ ++ + +N+MD +HI H T
Sbjct: 126 EYRGLDPETAYVAKDYLYAKANYVLETDNIMDLSHIEFLHPET 168
>gi|17231358|ref|NP_487906.1| hypothetical protein all3866 [Nostoc sp. PCC 7120]
gi|17133000|dbj|BAB75565.1| all3866 [Nostoc sp. PCC 7120]
Length = 351
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 99/192 (51%), Gaps = 11/192 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +V PLG+T++ Q I LY+D G++ +DRCPHR KLS GQ+I LE
Sbjct: 23 WYVVARSHEV-TSKPLGVTLWHQVIALYRDSEGQIHALEDRCPHRQVKLSHGQVIGNELE 81
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP-NPDKL 201
C YHGW+ G+C +P L + K+P + +R Y VKE G +W++ P P L
Sbjct: 82 CAYHGWRLNHHGECATVPYLAPNQKLP-NCTIRPYPVKEQDGFIWLFPGDGEPSLEPLGL 140
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWT-AKREDAQPLGFE 260
P +++ + I +S L+ENLMD H + D W A+ +D + E
Sbjct: 141 PEWDHL---NYIASVAIINCQAHYSYLIENLMDMYHGHLHQDLQAWAQAELQDIE----E 193
Query: 261 VTERTDRGFAGR 272
+R D + +
Sbjct: 194 NDQRVDAHYQAQ 205
>gi|329939798|ref|ZP_08289099.1| oxidase [Streptomyces griseoaurantiacus M045]
gi|329301368|gb|EGG45263.1| oxidase [Streptomyces griseoaurantiacus M045]
Length = 398
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 97/173 (56%), Gaps = 14/173 (8%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WYP+ T ++ + P G+ +++VL++D +G L C RCPH+ A + +G+L +
Sbjct: 5 QWYPILQTSEIQREKPTGVRRMGEELVLWRDLDGTLVCQTARCPHKGANIGDGRLKGNTV 64
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
EC YHG++F+ EG C +P L A A++P S +RTY V+E G+VW+W ++ + L
Sbjct: 65 ECPYHGFRFDAEGTCKVVPALGAGARVPASLKLRTYPVREQHGLVWLWWGEER----EHL 120
Query: 202 PWFE------NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWT 248
P E +RP ++ +S L Y I E+L++ H+ H R WT
Sbjct: 121 PAIELPAELVGNSRP-YETISWTRPLHYTRYI--ESLLEFYHVTFVH-RDHWT 169
>gi|148555200|ref|YP_001262782.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148500390|gb|ABQ68644.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 367
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 116/242 (47%), Gaps = 34/242 (14%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +V D+ L + ++Q++LY+ GEL + CPHR A L G+++ +E
Sbjct: 8 WYVAAWSDEVSDNL-LTRRILNEQVLLYRTEAGELVATANTCPHRFAPLHLGKVVGDAIE 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F GEG+CV P D +IP A +RTY + E G W+WM + +P
Sbjct: 67 CPYHGLRFNGEGRCVFNPD--GDGRIPAGARLRTYPITERLGAAWIWMGDPARADLAMIP 124
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDR------------------ 244
FE P ++ V + + ++ + +NLMD AH+ + H
Sbjct: 125 DFEFLEDPSYRTVKGVLHVRANYRYINDNLMDEAHLHMVHHNSLACDMVRRAKTELVKDE 184
Query: 245 --TDWTAK--REDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLR--FEAPCVLQNNRE 298
T W + R+ A P F++ R RG + + + +++ ++APC ++NN
Sbjct: 185 GGTIWANRYGRDGAPPAIFDMMWRMTRG-------DYEGTMDHWVEGGWKAPCFVRNNTG 237
Query: 299 LV 300
+V
Sbjct: 238 VV 239
>gi|323448461|gb|EGB04359.1| hypothetical protein AURANDRAFT_32727 [Aureococcus anophagefferens]
Length = 493
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 160/387 (41%), Gaps = 69/387 (17%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN--------GELRCYQDRCPHRL 128
+DW + WYP+ + + P + + +VL+ DG G R ++D CPHR
Sbjct: 29 FDWFDHWYPVNVVDSMDPSRPHKVQLLGLNLVLWNDGATVGGEKAAGSWRAFEDSCPHRR 88
Query: 129 AKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC---VRTYEVKESQG 184
LSEG++ DG L C YHGW+++G G C +P P ++K R C ++ + + G
Sbjct: 89 GPLSEGRVEDDGTLLCSYHGWRYDGSGACSDLPYSP-ESKRERHQCSASCASFPTQVADG 147
Query: 185 VVWVWMSQKTPP-----NPDKLPWFENFARPG------FQDVSTIHELPYDHSILLENLM 233
+VWV+ ++ P L + RPG + + + + P ++EN +
Sbjct: 148 MVWVFPNRAISAIEALLKPAPLVSELHDPRPGEDRDWQVKIPAGVRDFPCGWDTMVENTL 207
Query: 234 DPAHIPISHDRTDWTAKREDAQPLGFEVTERTDR--GFA--GRWGKEKDEPLPNFLRFEA 289
DPAH +H T + D + F+ T++ R GF G G L + L F
Sbjct: 208 DPAHFCAAHHGT-LGDRYSDPRAYTFKTTKKVSRDGGFELDGDMGS-----LESALEFVP 261
Query: 290 PCVLQNNRELVDSKTGEKHYFTGLFL---CRPTGQGKSMLIVRFGATKRSPLAK------ 340
PC+++ G + L L C PT GK + + +P +
Sbjct: 262 PCLVKYR-----PNYGAMPFEGALVLATYCVPTAPGKVRPLATVLRDRAAPFGETLAERA 316
Query: 341 ------------LFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETV-PTK-------ELY 380
L PKW+ H +S V QD L Q L+ E PTK ++
Sbjct: 317 LAVFMGPTWFPGLVPKWFGHIASSVVLHQDAALLYEQYRNLIDEGYEPTKPGSKSFNQVC 376
Query: 381 LNLRSSDTWVAEYRKWMD-KVGHGMPY 406
D V YR+W+ G G+P+
Sbjct: 377 YMPNDVDRGVTAYRRWLQVHAGGGVPW 403
>gi|300864498|ref|ZP_07109363.1| Rieske (2Fe-2S) region [Oscillatoria sp. PCC 6506]
gi|300337508|emb|CBN54511.1| Rieske (2Fe-2S) region [Oscillatoria sp. PCC 6506]
Length = 350
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 97/185 (52%), Gaps = 8/185 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +V P+ + +++Q IV+Y+D E+R +DRCPHR KLS GQ+ LE
Sbjct: 23 WYVVARSNEVKTQ-PIAVILWNQPIVIYRDNTEEIRALEDRCPHRQVKLSHGQVKGDLLE 81
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F G+C ++ L + K+P S +R++ VKE G +W++ +T L
Sbjct: 82 CAYHGWRFNASGECAEVDYLADNQKLP-SCKIRSFPVKEQDGFIWLFPGDETKAEQVSLL 140
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
+ + ++ +S L+ENLMD H H DW A A+P+ ++
Sbjct: 141 GLPEWEHINYIATVSVINCQAHYSFLIENLMDMYH---GHLHQDWQAW---AEPVLQDLD 194
Query: 263 ERTDR 267
E DR
Sbjct: 195 EDADR 199
>gi|307725646|ref|YP_003908859.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1003]
gi|307586171|gb|ADN59568.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1003]
Length = 356
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 81/164 (49%), Gaps = 4/164 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L+ +V APLG T+ D+ +VLY+ GE DRCPHR A LS G+++DG LE
Sbjct: 8 WYVAALSSEVTAHAPLGRTLLDEPVVLYRTAGGEAVALADRCPHRFAPLSSGRIVDGTLE 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F G CV P D ++P A R Y V E G VW W LP
Sbjct: 68 CPYHGLRFGAHGHCVFNPH--GDGRVPARAQARRYPVHERYGAVWFWPGDPQRALGTPLP 125
Query: 203 WFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
F+ R F +H ++ + +NL+D +H H T
Sbjct: 126 AFDYLDPRDHFTSERYLHTRA-NYQLSADNLLDLSHFQYLHPDT 168
>gi|395003531|ref|ZP_10387666.1| ring-hydroxylating dioxygenase, large terminal subunit [Acidovorax
sp. CF316]
gi|394318544|gb|EJE54963.1| ring-hydroxylating dioxygenase, large terminal subunit [Acidovorax
sp. CF316]
Length = 325
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 93/177 (52%), Gaps = 15/177 (8%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG 139
T W+P+ L V APL + + +VL++DG G+++ + DRCPHR A+LS G++ G
Sbjct: 4 TTLWHPVALAHAV-QQAPLAVQLLQHALVLWRDGAGQVQAFTDRCPHRGARLSLGRVHGG 62
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 199
R+EC YHGWQF G+C +P LP P + C + V E+ G++WV +
Sbjct: 63 RIECPYHGWQFAASGQCEHVPALP-QFTPPATHCALRHGVVEAYGLIWV----RIVAGDA 117
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHDRTDWTAKRE 252
LP FE G + + + PYD + ++EN +D AH HD W RE
Sbjct: 118 ALPAFEA---EGDERLRKLDCGPYDVATSAPRIVENFLDMAHFGFVHD--GWLGTRE 169
>gi|225620020|ref|YP_002721277.1| Rieske (2Fe-2S) domain-containing protein [Brachyspira
hyodysenteriae WA1]
gi|225214839|gb|ACN83573.1| Rieske (2Fe-2S) domain protein [Brachyspira hyodysenteriae WA1]
Length = 327
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 144/337 (42%), Gaps = 39/337 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +K+V + PL ++ +V ++D N + C D+C HR A LS G++ +
Sbjct: 6 WYAVLDSKEVKRNKPLFAKRLNKNLVFWRDSNNNICCIDDKCCHRGASLSHGKICGNNIA 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C +HG+QF+ GK V IP + ++ ++ V YEV+E G +W+W K N D++
Sbjct: 66 CPFHGFQFDKTGKTVMIPANGKNTEVNKNFFVEGYEVRELYGFIWLWYGDKDKIN-DRIM 124
Query: 203 WFENFARPGFQDVSTIHELPYDH-SILLENLMDPAHIPISHDRTDWTAKR---------- 251
+ ++ F STI + ++H + +EN +D HI H T +
Sbjct: 125 FPDDLKDKKFS-YSTIRDQWHNHYTRCIENQLDVVHIAFVHYNTIGKGNKTVVNGPLVEL 183
Query: 252 -EDAQPLGFEVTERTDRG-FAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHY 309
ED L F V D G A R + K E FL F P QN EK
Sbjct: 184 DEDNNILKFYVNNVIDSGQKALRESEMKKEDFKYFLYFYFPNTWQN-------YIFEKMR 236
Query: 310 FTGLFLCRPTGQGKSMLIVRF-GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEV 368
G+F P +++ +RF P K + + KV +QD + +Q
Sbjct: 237 VFGVFA--PVDDENTVIYMRFYQKIVNIPFIKSIVNLIGKKYSDKVLKQDKNVVKTQ--- 291
Query: 369 LMKETVPTKELYLNLRSS-----DTWVAEYRKWMDKV 400
+KE YL ++ D + YR DK+
Sbjct: 292 ------SSKESYLGMKEEKLIPGDRPIIIYRSTRDKL 322
>gi|392307718|ref|ZP_10270252.1| oxidase [Pseudoalteromonas citrea NCIMB 1889]
Length = 372
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 93/164 (56%), Gaps = 6/164 (3%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WY + +DV P+G+ ++ +VLY+D GEL C D+CPH+ LS G+ +
Sbjct: 5 QWYAISRIQDV-KKKPIGIKRLNKLLVLYRDTKGELVCMDDKCPHKGVMLSRGKQHGDII 63
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP-DK 200
C YHG+QF+ +G CV +P L + +P+ CV+TY+VKE G++W W P N +
Sbjct: 64 ACPYHGFQFDQKGDCVHMPVLGKNGDVPKGMCVKTYKVKEEFGLIWFWYGDLMPENDYPE 123
Query: 201 LPWFENFARPGFQDVSTIH--ELPYDHSILLENLMDPAHIPISH 242
+P F+ F ++ + + + P +++ +E++ + HIP H
Sbjct: 124 VPMFKQFKE--YKGYYSFYGWDAPINYTRYVESVCEIYHIPFVH 165
>gi|55584974|gb|AAV53699.1| DdmC [Stenotrophomonas maltophilia]
Length = 339
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 11/182 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L +++ + PLG T+ D + LY+ +G + D CPHR A LS+G L++G L+
Sbjct: 8 WYVAALPEEL-SEKPLGRTILDTPLALYRQPDGVVAALLDICPHRFAPLSDGILVNGHLQ 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F+G G+CV P + P S VR++ V E ++W+W +P +P
Sbjct: 67 CPYHGLEFDGGGQCVHNPH--GNGARPASLNVRSFPVVERDALIWIWPGDPALADPGAIP 124
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
F P ++ V + ++ +L++NLMD H H R +AQ F+
Sbjct: 125 DFGCRVDPAYRTVGGYGHVDCNYKLLVDNLMDLGHAQYVH--------RANAQTDAFDRL 176
Query: 263 ER 264
ER
Sbjct: 177 ER 178
>gi|254574850|pdb|3GKE|A Chain A, Crystal Structure Of Dicamba Monooxygenase
gi|254574851|pdb|3GKE|B Chain B, Crystal Structure Of Dicamba Monooxygenase
gi|254574852|pdb|3GKE|C Chain C, Crystal Structure Of Dicamba Monooxygenase
gi|254839314|pdb|3GB4|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
gi|254839315|pdb|3GB4|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
gi|254839316|pdb|3GB4|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dicamba
gi|254839346|pdb|3GOB|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
gi|254839347|pdb|3GOB|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
gi|254839348|pdb|3GOB|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Cobalt And Dcsa
gi|254839356|pdb|3GTE|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
gi|254839357|pdb|3GTE|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
gi|254839358|pdb|3GTE|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron
gi|254839359|pdb|3GTS|A Chain A, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
gi|254839360|pdb|3GTS|B Chain B, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
gi|254839361|pdb|3GTS|C Chain C, Crystal Structure Of Dicamba Monooxygenase With Non-Heme
Iron And Dicamba
gi|255311844|pdb|3GL0|A Chain A, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
gi|255311845|pdb|3GL0|B Chain B, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
gi|255311846|pdb|3GL0|C Chain C, Crystal Structure Of Dicamba Monooxygenase Bound To 3,6
Dichlorosalicylic Acid (Dcsa)
gi|255311847|pdb|3GL2|A Chain A, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
gi|255311848|pdb|3GL2|B Chain B, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
gi|255311849|pdb|3GL2|C Chain C, Crystal Structure Of Dicamba Monooxygenase Bound To
Dicamba
Length = 349
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 11/182 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L +++ + PLG T+ D + LY+ +G + D CPHR A LS+G L++G L+
Sbjct: 9 WYVAALPEEL-SEKPLGRTILDTPLALYRQPDGVVAALLDICPHRFAPLSDGILVNGHLQ 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F+G G+CV P + P S VR++ V E ++W+W +P +P
Sbjct: 68 CPYHGLEFDGGGQCVHNPH--GNGARPASLNVRSFPVVERDALIWIWPGDPALADPGAIP 125
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
F P ++ V + ++ +L++NLMD H H R +AQ F+
Sbjct: 126 DFGCRVDPAYRTVGGYGHVDCNYKLLVDNLMDLGHAQYVH--------RANAQTDAFDRL 177
Query: 263 ER 264
ER
Sbjct: 178 ER 179
>gi|393778388|ref|ZP_10366662.1| Rieske (2Fe-2S) protein [Ralstonia sp. PBA]
gi|392714659|gb|EIZ02259.1| Rieske (2Fe-2S) protein [Ralstonia sp. PBA]
Length = 360
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 89/164 (54%), Gaps = 5/164 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYPL +D+ + + V ++ IV+Y+ +G++ QD CPHRLA LS G+L +E
Sbjct: 8 WYPLGWAEDIGRELSRHM-VLEEAIVVYRREDGKIAALQDACPHRLAPLSLGKLKGDTIE 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F+ GKCV+I P IP +A VR Y ++E G+ W+WM +P KL
Sbjct: 67 CGYHGMTFDCSGKCVRI---PGQEIIPGNAVVRAYPIEEKYGLAWIWMGDPALADPAKLF 123
Query: 203 WFENFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRT 245
+ P ++ V + ++ L +NL+DPAH+ H T
Sbjct: 124 HIAQYDDPNWRAVKGGTLRIDCNYLSLCDNLLDPAHVTFVHPST 167
>gi|347528258|ref|YP_004835005.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136939|dbj|BAK66548.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 351
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +KD +++ ++ +V+Y+ NG L +DRCPHR A LS+G+ L
Sbjct: 7 WYMAGWSKDFTGTDVQSVSILNEPLVMYRADNGSLVALEDRCPHRAAPLSKGRREGNDLR 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C+YHG F +G C +P P IP+S CVR+Y V E G WVWM + + +P
Sbjct: 67 CMYHGIMFGPDGACTDLPGQPV---IPKSVCVRSYNVIEKDGCAWVWMGEADRLDFALIP 123
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPL 257
F P + + ++ + +L++NL+D +H P H+ T + ++ Q L
Sbjct: 124 NFIGPDHPDWAITQSQLDIDAEGQLLIDNLLDVSHAPYVHEATFGVSDKKTVQTL 178
>gi|86608774|ref|YP_477536.1| Rieske family iron-sulfur cluster-binding protein [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|86557316|gb|ABD02273.1| iron-sulfur cluster-binding protein, Rieske family [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 339
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +P + ++IVL+ D G+ + DRC HR A+LS+G + DG +
Sbjct: 13 WYPVMPLSRLEQGSPQPFELLGERIVLWLDKAGQPQAVADRCCHRSAQLSKGIVCDGHIR 72
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK-L 201
C YHGW+F+G G CVK+PQLP A+IP S + Y + G WV + P P + +
Sbjct: 73 CPYHGWEFDGTGACVKVPQLPDQARIPESYRIPAYLCQARYGYAWVCLH----PQPLRGI 128
Query: 202 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
P P ++ + +E S+ + EN D AHI H T ED P FE
Sbjct: 129 PVIPEAEDPSYRLIHEFYERWECASLRICENEFDAAHISFVHQNT--FGSMEDLVPSHFE 186
Query: 261 VTERTDRGFAGR 272
V E D G R
Sbjct: 187 V-EELDYGIRTR 197
>gi|113477070|ref|YP_723131.1| Rieske (2Fe-2S) protein [Trichodesmium erythraeum IMS101]
gi|110168118|gb|ABG52658.1| Rieske (2Fe-2S) region [Trichodesmium erythraeum IMS101]
Length = 349
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 98/172 (56%), Gaps = 8/172 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + ++ PL +T++ Q IVLY+ +G++ +D CPHR KLS G++I LE
Sbjct: 22 WYAVARSIEL-QSQPLSITLWHQTIVLYRGCSGKVYGLEDICPHRFVKLSSGRVIADELE 80
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN---PD 199
C YHGW+FE GKC IP L ++ K+P S +RT+ V+E G +W++ K+ N P
Sbjct: 81 CTYHGWRFESNGKCSHIPYLASNQKLP-SCQIRTFPVQELHGFIWLFPGDKSLANLISPL 139
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKR 251
++P +++ + ++ + +S L+ENLMD H + + W A +
Sbjct: 140 EIPEWDHL---NYIATISVIKCRAHYSYLVENLMDMYHGHLHQNWQAWAAAK 188
>gi|226490898|ref|NP_001151343.1| LOC100284976 [Zea mays]
gi|195645962|gb|ACG42449.1| chlorophyllide a oxygenase [Zea mays]
gi|223948119|gb|ACN28143.1| unknown [Zea mays]
gi|413951238|gb|AFW83887.1| chlorophyllide a oxygenase [Zea mays]
Length = 542
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 151/337 (44%), Gaps = 45/337 (13%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++Q V+++ +G C Q+ C HR L G + +GR++
Sbjct: 221 WYPVAFSSDLKDDTMVPIACFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQ 280
Query: 143 CLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 199
C YHGW++ +GKC K+P + +I C E +G+VW+W P P
Sbjct: 281 CPYHGWEYSTDGKCEKMPSTKMLNVRIQSLPCF------EQEGMVWIWPGDDPPKATIPS 334
Query: 200 KLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 335 LLP------PSGFTVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 386
Query: 259 FEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL-----VDSKTGEK--HYFT 311
+T + G G W +P P + F PC++ + + ++ K+ ++ +
Sbjct: 387 KFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLH 439
Query: 312 GLFLCRPTGQGKSMLIVRFGAT-----KRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQN 366
L +C P+ + K+ L+ R K PL L + A KV +D+ + Q
Sbjct: 440 QLHVCLPSSRNKTRLLYRMSLDFAPWLKHVPLMHLL----WSHFAEKVLNEDLRLVLGQQ 495
Query: 367 EVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
E ++ ++ S D YR W D V G
Sbjct: 496 ERMINGA----NVWNWPVSYDKLGVRYRLWRDTVERG 528
>gi|300871468|ref|YP_003786341.1| rieske (2Fe-2S) domain-containing protein [Brachyspira pilosicoli
95/1000]
gi|300689169|gb|ADK31840.1| rieske (2Fe-2S) domain protein [Brachyspira pilosicoli 95/1000]
Length = 328
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 143/337 (42%), Gaps = 39/337 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +K+V + PL ++ +V ++D N + C +D+C HR A LS G++ +
Sbjct: 6 WYGVLDSKEVKKNKPLFAKRLNKNLVFWRDENNNICCIEDKCCHRGASLSHGKVCGNNIA 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C +HG+QF GK V IP + ++ V +YEV+E G++W+W K N DK+
Sbjct: 66 CPFHGFQFNKNGKVVMIPANGKNTQVDERFFVESYEVRELYGLIWLWYGDKDKIN-DKIM 124
Query: 203 WFENFARPGFQDVSTIHELPYDH-SILLENLMDPAHIPISHDRTDWTAKR---------- 251
+ ++ F STI + ++H + +EN +D H+ H T +
Sbjct: 125 FPDDLKDKKFS-YSTIRDEWHNHYTRCIENQLDVVHVAFVHYNTIGKGNKTLVNGPLVEL 183
Query: 252 -EDAQPLGFEVTERTDRGFAGRWGKE-KDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHY 309
ED L F V D G E K E FL F P + QN EK
Sbjct: 184 NEDTNTLKFYVNNVIDNGQKALSASEMKKEDFKYFLYFYFPNIWQN-------YIFEKMR 236
Query: 310 FTGLFLCRPTGQGKSMLIVRF-GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEV 368
F P +++ +RF P+ K + + ++ V +QD + +Q
Sbjct: 237 VFAAFA--PVDDENTVVYIRFYQKVVNIPIIKNIVNFIGKKFSAYVLKQDKDVVKTQ--- 291
Query: 369 LMKETVPTKELYLNLRSS-----DTWVAEYRKWMDKV 400
+KE YL ++ D + YR DK+
Sbjct: 292 ------SSKESYLGMKEEKLIPGDMPIIAYRSHRDKL 322
>gi|297170934|gb|ADI21951.1| phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases, large terminal subunit [uncultured nuHF2
cluster bacterium HF0130_29D04]
Length = 329
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 89/175 (50%), Gaps = 3/175 (1%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WY L+K+VP+ P + + IV ++ GE+ +DRC HR A LS G + +G +
Sbjct: 9 QWYAAALSKEVPEKEPFARKICGEDIVFFRKPKGEVSALEDRCAHRHAPLSLGLVENGSI 68
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHG F+G G+CV++ P KIP A +++Y V E G VW+W+ + + +
Sbjct: 69 RCQYHGMLFDGNGQCVEV---PGQEKIPSGARIKSYPVAEQDGWVWIWIGKNGSQSVSTI 125
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
P F F + + + ++NL+D +H+ +H + + A+P
Sbjct: 126 PSFPYFDTAKWAGFQKYFHVQGAAQLFVDNLLDLSHLAFTHKSSIGSTSSAVAEP 180
>gi|431807777|ref|YP_007234675.1| rieske (2Fe-2S) domain-containing protein [Brachyspira pilosicoli
P43/6/78]
gi|430781136|gb|AGA66420.1| rieske (2Fe-2S) domain-containing protein [Brachyspira pilosicoli
P43/6/78]
Length = 328
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 143/337 (42%), Gaps = 39/337 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +K+V + PL ++ +V ++D N + C +D+C HR A LS G++ +
Sbjct: 6 WYGVLDSKEVKKNKPLFAKRLNKNLVFWRDENNNICCIEDKCCHRGASLSHGKVCGNNIA 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C +HG+QF GK V IP + ++ V +YEV+E G++W+W K N DK+
Sbjct: 66 CPFHGFQFNKNGKVVMIPANGKNTQVDERFFVESYEVRELYGLIWLWYGDKDKIN-DKIM 124
Query: 203 WFENFARPGFQDVSTIHELPYDH-SILLENLMDPAHIPISHDRTDWTAKR---------- 251
+ ++ F STI + ++H + +EN +D H+ H T +
Sbjct: 125 FPDDLEDKKFS-YSTIRDEWHNHYTRCIENQLDVVHVAFVHYNTIGKGNKTLVNGPLVEL 183
Query: 252 -EDAQPLGFEVTERTDRGFAGRWGKE-KDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHY 309
ED L F V D G E K E FL F P + QN EK
Sbjct: 184 NEDTNTLKFYVNNVIDNGQKALSASEMKKEDFKYFLYFYFPNIWQN-------YIFEKMR 236
Query: 310 FTGLFLCRPTGQGKSMLIVRF-GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEV 368
F P +++ +RF P+ K + + ++ V +QD + +Q
Sbjct: 237 VFAAFA--PVDDENTVVYIRFYQKVVNIPIIKNIVNFIGKKFSAYVLKQDKDVVKTQ--- 291
Query: 369 LMKETVPTKELYLNLRSS-----DTWVAEYRKWMDKV 400
+KE YL ++ D + YR DK+
Sbjct: 292 ------SSKESYLGMKEEKLIPGDMPIIAYRSHRDKL 322
>gi|404475340|ref|YP_006706771.1| rieske (2Fe-2S) domain-containing protein [Brachyspira pilosicoli
B2904]
gi|404436829|gb|AFR70023.1| rieske (2Fe-2S) domain-containing protein [Brachyspira pilosicoli
B2904]
Length = 328
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 143/337 (42%), Gaps = 39/337 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +K+V + PL ++ +V ++D N + C +D+C HR A LS G++ +
Sbjct: 6 WYGVLDSKEVKKNKPLFAKRLNKNLVFWRDENNNICCIEDKCCHRGASLSHGRVCGNNIA 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C +HG+QF GK V IP + ++ V +YEV+E G++W+W K N DK+
Sbjct: 66 CPFHGFQFNQNGKVVMIPANGKNTQVDEKFFVESYEVRELYGLIWLWYGDKDKIN-DKIM 124
Query: 203 WFENFARPGFQDVSTIHELPYDH-SILLENLMDPAHIPISHDRTDWTAKR---------- 251
+ ++ F STI + ++H + +EN +D H+ H T +
Sbjct: 125 FPDDLKDKKFS-YSTIRDEWHNHYTRCIENQLDVVHVAFVHYNTIGKGNKTLVNGPLVEL 183
Query: 252 -EDAQPLGFEVTERTDRGFAGRWGKE-KDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHY 309
ED L F V D G E K E FL F P + QN EK
Sbjct: 184 NEDTNTLKFYVNNVIDNGQKALSASEMKKEDFKYFLYFYFPNIWQN-------YIFEKMR 236
Query: 310 FTGLFLCRPTGQGKSMLIVRF-GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEV 368
F P +++ +RF P+ K + + ++ V +QD + +Q
Sbjct: 237 VFAAFA--PVDDENTVVYIRFYQKVVNIPIIKNIVNFIGKKFSAYVLKQDKDVVKTQ--- 291
Query: 369 LMKETVPTKELYLNLRSS-----DTWVAEYRKWMDKV 400
+KE YL ++ D + YR DK+
Sbjct: 292 ------SSKESYLGMKEEKLIPGDMPIIAYRSHRDKL 322
>gi|359492578|ref|XP_002284499.2| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Vitis
vinifera]
gi|302141810|emb|CBI19013.3| unnamed protein product [Vitis vinifera]
Length = 537
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 154/334 (46%), Gaps = 39/334 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++ V+++ +G+ C ++ C HR L G + +GR++
Sbjct: 220 WYPVAFSTDLKDDTMIPIDCFEEPWVVFRGQDGKPGCVRNTCAHRACPLHLGSVNEGRIQ 279
Query: 143 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW++ +GKC K+P + KI C+ E +G++W+W P L
Sbjct: 280 CPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCL------EQEGMIWIWPGSDPPTA--TL 331
Query: 202 PWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
P + PGF+ + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 332 PSLQ--PPPGFKIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKF 387
Query: 261 VTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH---------YFT 311
+T + G G W +P P + F PC++ + + SK G+ +
Sbjct: 388 LTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI--SKPGKLEGQSTKQCATHLH 438
Query: 312 GLFLCRPTGQGKSMLIVRFGATKRSPLAKL-FPKWYFHQNASKVFEQDMGF-LSSQNEVL 369
L +C P+ + K+ L+ R L + F ++ + A KV +D+ L Q+ +L
Sbjct: 439 QLHVCLPSSRDKTRLLYRMSLDFAPVLQHIPFMQYLWRYFAEKVLNEDLRLVLGQQDRML 498
Query: 370 MKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
M V + S D YR W D V G
Sbjct: 499 MGANVWNCPV-----SYDKLGVRYRLWRDAVERG 527
>gi|383786720|ref|YP_005471289.1| ring-hydroxylating dioxygenase, large terminal subunit
[Fervidobacterium pennivorans DSM 9078]
gi|383109567|gb|AFG35170.1| ring-hydroxylating dioxygenase, large terminal subunit
[Fervidobacterium pennivorans DSM 9078]
Length = 327
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 153/342 (44%), Gaps = 48/342 (14%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG-- 139
+WY + + ++ +GLT F +++ +++D G++ C D C HR A LS G+L+
Sbjct: 5 QWYVVLSSSELKKGQLIGLTRFGEKLAMWRDEKGDVHCISDICCHRGASLSHGKLLANGE 64
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 199
RL C +HG++++ GK IP A +P + V++Y+ E +W+W PP+P
Sbjct: 65 RLMCPFHGFEYDPTGKVQAIPSNGRTAPVPENFKVKSYKTYELADFIWIWYGDNDPPSPP 124
Query: 200 KLPWFEN----FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ 255
+F++ F ++ +H +S +EN +DP H+P H T R A
Sbjct: 125 S--YFDDIDDSLVYSQFSEIWNVH-----YSRAIENQLDPIHVPFVHYNTIGRGNRTVAD 177
Query: 256 P----------LGFEVTERTDRGFAGRWGKEKD--EPLPNFLRFEAPCVLQNNRELVDSK 303
F V R D G R +E + E +L F+ P + QN+
Sbjct: 178 GPIVKWINDTMFYFYVFNRVDDGTPARKPEEMEISEMSKVYLEFKFPNIWQNH------- 230
Query: 304 TGEKHYFTGLFLCRPTGQGKSMLIVRF--GATKRSPLAKLFPKWYFHQNASKVFEQDMGF 361
EK T F+ P +++ +RF G TK + KL N KV QD
Sbjct: 231 IHEKLRVTAAFV--PIDDEHTLIYLRFYVGFTKIKFIDKLISLLGMPFN-RKVLHQDKAV 287
Query: 362 LSSQNEVLMKETVPTK-ELYL--NLRSSDTWVAEYRKWMDKV 400
+ +Q +P K EL + NL + D + EYRK +K+
Sbjct: 288 VETQ--------IPKKSELKMSENLINGDLPILEYRKKREKL 321
>gi|379011985|ref|YP_005269797.1| hypothetical protein Awo_c21320 [Acetobacterium woodii DSM 1030]
gi|375302774|gb|AFA48908.1| hypothetical protein containing a rieske (2Fe-2S) domain
[Acetobacterium woodii DSM 1030]
Length = 322
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 144/334 (43%), Gaps = 44/334 (13%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WY + + ++ + G+T +++VL++D G ++C D+C HR A LS G L+ +
Sbjct: 5 QWYGILNSNEIKKNKLTGVTRMGEKLVLWRDETGAVKCIFDQCCHRGASLSAGTLVHDTI 64
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
+C +HG+ ++G G+ V+IP A +P V Y VKE G +W+W P+ +
Sbjct: 65 KCPFHGFSYDGTGRVVQIPANGKKAPVPEHFKVNAYVVKEKYGFIWLWYGAFQEVLPE-I 123
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT--------------DW 247
P+FE + R GF S P ++ +EN +D H+P H + +W
Sbjct: 124 PFFE-YLRTGFSYGSFSEVWPVHYTRAIENQLDVVHLPFVHANSIGRGNKTLVNGPVVEW 182
Query: 248 TAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNF--LRFEAPCVLQNNRELVDSKTG 305
R + F V + D G + + E + L F+ P + QN K
Sbjct: 183 VDNR-----MTFYVNNQVDNGESKPLKPLEIENYQDLFSLEFQMPNMWQN-------KIS 230
Query: 306 EKHYFTGLFLCRPTGQGKSMLIVRFGAT-KRSPLAKLFPKWYFHQNASKVFEQDMGFLSS 364
+F P +G + + +RF R P+ K + + + QD + +
Sbjct: 231 PDVRIVAIFA--PIDEGHTKIYLRFYQRFMRLPILKQMVNHFSNVTNRFILHQDRHVVLT 288
Query: 365 QNEVLMKETVPTK---ELYLNLRSSDTWVAEYRK 395
Q +P K E+ NL D + EYRK
Sbjct: 289 Q--------IPKKSELEMNENLIQGDAPIIEYRK 314
>gi|255545394|ref|XP_002513757.1| chlorophyll synthase, putative [Ricinus communis]
gi|223546843|gb|EEF48340.1| chlorophyll synthase, putative [Ricinus communis]
Length = 535
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 155/338 (45%), Gaps = 47/338 (13%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++ V+++ +G+ C Q+ C HR L G + +GR++
Sbjct: 218 WYPVAFSTDLKDDTMIPIDCFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQ 277
Query: 143 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW++ +GKC K+P + KI C E +G++WVW P L
Sbjct: 278 CPYHGWEYTTDGKCEKMPSTRLLNVKIKSLPCF------EQEGMIWVWPGSDPPAA--TL 329
Query: 202 PWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
P + A GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 330 PSLQPPA--GFHVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWTVPSLVTF 385
Query: 261 VTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH---------YFT 311
+T + G G W +P P + F PC++ + + SK G+ +
Sbjct: 386 LTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI--SKPGKLEGKSTRQCATHLH 436
Query: 312 GLFLCRPTGQGKSMLIVRFGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQNEVL 369
L +C P+ + K+ L+ R + +PL K P ++ + A +V +D+ + Q E +
Sbjct: 437 QLHVCLPSSRQKTRLLYRM-SLDFAPLLKHIPFMEYLWRHFAEQVLNEDLRLVVGQQERM 495
Query: 370 MKE----TVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
+ +P L +R YR W D V G
Sbjct: 496 INGANVWNLPVTYDKLGVR--------YRLWRDAVERG 525
>gi|428772905|ref|YP_007164693.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Cyanobacterium stanieri PCC 7202]
gi|428687184|gb|AFZ47044.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanobacterium stanieri
PCC 7202]
Length = 354
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 96/171 (56%), Gaps = 11/171 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +V D P+ +T++ +IVL++D G + +DRCPHR KLS G+++D +E
Sbjct: 20 WYVVARSVEVKD-QPVSVTLWHNEIVLFRDSQGNINALEDRCPHRQVKLSPGKVVDDNIE 78
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW--MSQKTPPNPDK 200
C YHGWQF+ EG C +P L K+PR ++ Y V+E G +W++ +P
Sbjct: 79 CAYHGWQFDKEGNCSFVPYLDERQKLPRCK-IKRYPVQELDGFIWLFPGDGDSEAVSPMG 137
Query: 201 LPWFENFARPGFQDVSTIHEL--PYDHSILLENLMDPAHIPISHDRTDWTA 249
LP +E+ ++++ E+ P +S L+ENLMD H + + W +
Sbjct: 138 LPEWEHLNY-----IASVAEVDCPGHYSYLIENLMDMHHGHLHDNYQAWAS 183
>gi|242059995|ref|XP_002459143.1| hypothetical protein SORBIDRAFT_03g046660 [Sorghum bicolor]
gi|241931118|gb|EES04263.1| hypothetical protein SORBIDRAFT_03g046660 [Sorghum bicolor]
Length = 542
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 151/337 (44%), Gaps = 45/337 (13%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++Q V+++ +G C Q+ C HR L G + +GR++
Sbjct: 221 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQ 280
Query: 143 CLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 199
C YHGW++ +GKC K+P + +I C E +G+VW+W P P
Sbjct: 281 CPYHGWEYSTDGKCEKMPSTKMLNVRIQSLPCF------EQEGMVWIWPGDDPPKATIPS 334
Query: 200 KLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 335 LLP------PSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 386
Query: 259 FEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL-----VDSKTGEK--HYFT 311
+T + G G W +P P + F PC++ + + ++ K+ ++ +
Sbjct: 387 KFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLH 439
Query: 312 GLFLCRPTGQGKSMLIVRFGAT-----KRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQN 366
L +C P+ + K+ L+ R K PL L + A KV +D+ + Q
Sbjct: 440 QLHVCLPSSRNKTRLLYRMSLDFAPWLKHVPLMHLL----WSHFAEKVLNEDLRLVLGQQ 495
Query: 367 EVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
E ++ ++ S D YR W D V G
Sbjct: 496 ERMINGA----NIWNWPVSYDKLGIRYRLWRDAVERG 528
>gi|294011169|ref|YP_003544629.1| putative Rieske protein [Sphingobium japonicum UT26S]
gi|292674499|dbj|BAI96017.1| putative Rieske protein [Sphingobium japonicum UT26S]
Length = 430
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L+ +V + +++++D GE QDRCPHR A LS G + +
Sbjct: 80 WYVAALSSEVDATQLFHRRILGMSVLIFRDAQGEAVALQDRCPHRFAPLSMGSRVGDAIA 139
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F+ G CV P ++PR VR + + E G +W+WM+++ +P LP
Sbjct: 140 CPYHGLRFDAGGHCVHNPH--GRGQLPRGQVVRGFPLIERHGFIWIWMAEEA-ADPALLP 196
Query: 203 WFENFARPGFQDVS-TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
F R V T +LP D+ ++L+N+MD +H+ H T R PL +V
Sbjct: 197 DFSPLDRGHANGVGHTYMKLPVDYRLILDNVMDLSHVDYVHGEIITT--RGQLSPLIPQV 254
Query: 262 TERTDRGFAGRWGKEKDEPLPNFLRF 287
E T+ + W + P+ F F
Sbjct: 255 -EETENSVSASWDYSQTPPIGIFAPF 279
>gi|15644039|ref|NP_229088.1| oxidase-related protein [Thermotoga maritima MSB8]
gi|418044556|ref|ZP_12682652.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thermotoga maritima
MSB8]
gi|4981841|gb|AAD36358.1|AE001783_9 oxidase-related protein [Thermotoga maritima MSB8]
gi|351677638|gb|EHA60785.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thermotoga maritima
MSB8]
Length = 331
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 151/341 (44%), Gaps = 56/341 (16%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG-- 139
+WY + ++++ +G+T F +++ ++D NG++ C D C HR A +S G+++
Sbjct: 5 QWYVVLSSRELKKGQLIGVTRFGEKLAFWRDSNGKVHCISDICCHRGASISHGKVLSNGE 64
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 199
R+ C +HG++++ +G+ IP + +P + V++Y E +W+W + P P
Sbjct: 65 RVMCPFHGFEYDSQGRVRTIPANGRNTPVPENFRVKSYPTYELADFIWIWYGDREPEKPP 124
Query: 200 KLPWFEN----FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKR---- 251
K +F++ F++V +H +S +EN +DP H+P H T R
Sbjct: 125 K--YFDDITDELVYTEFKEVWNVH-----YSRAIENQLDPIHLPFVHYNTIGRGNRTVVD 177
Query: 252 ------EDAQPLGFEVTERTDRGFAGRWGKEKDEPLPN--FLRFEAPCVLQNNRELVDSK 303
+D + F V R D G R +E D + +L F+ P + QN+
Sbjct: 178 GPIVEWKDDEMFYFYVFNRIDDGTPARKPEEMDPKRKSKVYLEFKFPNIWQNH------- 230
Query: 304 TGEKHYFTGLFLCRPTGQGKSMLIVRF--GATKRSPLAKL-------FPKWYFHQNASKV 354
EK T F P +M+ +RF G T L KL F K HQ+ V
Sbjct: 231 ISEKIRVTAAFT--PIDDDHTMIYLRFYVGLTGIKFLDKLIAVLGKPFNKIVLHQDKRVV 288
Query: 355 FEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRK 395
Q + ++E+ M E NL D + EYRK
Sbjct: 289 ETQ----IPKRSELRMGE---------NLIPGDAPILEYRK 316
>gi|167572126|ref|ZP_02365000.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
oklahomensis C6786]
Length = 330
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
++ W P+ L++ V + PLG+ +Q +VL++D +G +R +DRC HR A LS G++
Sbjct: 9 FNSASRWMPVALSEQVSSETPLGVVCMEQPLVLFRDASGAVRAMEDRCAHRRAPLSLGRM 68
Query: 137 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 187
DGRL+C YHGW +EG G CV IP L A+ +P R Y+ E G VW
Sbjct: 69 TPDGRLQCAYHGWTYEGATGACVAIPNLSANEHVPSHFAARAYKTLERDGFVW 121
>gi|224066823|ref|XP_002302233.1| predicted protein [Populus trichocarpa]
gi|222843959|gb|EEE81506.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/337 (27%), Positives = 152/337 (45%), Gaps = 45/337 (13%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++ VL++ +G+ C ++ C HR L G + +GR++
Sbjct: 155 WYPVAFSTDLKDDTMIPIDCFEEPWVLFRGKDGKPGCVRNTCAHRACPLHLGSVNEGRIQ 214
Query: 143 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW++ +GKC K+P D K+ C E +G++W+W P L
Sbjct: 215 CPYHGWEYSTDGKCEKMPSTRLLDVKVKSLPCF------EQEGMIWIWPGSDPPAA--SL 266
Query: 202 PWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
P + PGFQ + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 267 PSLQ--PPPGFQVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWTVPSLVKF 322
Query: 261 VTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH---------YFT 311
+T + G G W +P P + F PC++ + + SK G+ +
Sbjct: 323 LTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI--SKPGKLEGQSTRECATHLH 373
Query: 312 GLFLCRPTGQGKSMLIVRF-----GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQN 366
L +C P+ + K+ L+ R G K P F + + A +V +D+ + Q
Sbjct: 374 QLHVCLPSSRQKTRLLYRMSLDFAGVLKHFP----FMHYLWKHFAEQVLNEDLRLVLGQQ 429
Query: 367 EVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
E ++ ++ S D YR W D V G
Sbjct: 430 ERMINGA----NVWNWPVSYDKLGVRYRLWRDAVERG 462
>gi|299471143|emb|CBN79000.1| Rieske (2Fe-2S) region [Ectocarpus siliculosus]
Length = 476
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 144/353 (40%), Gaps = 39/353 (11%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL-IDGR 140
+WYP+ K V + + + +V++++ G C+ DRCPHR A L+EG++ DG
Sbjct: 10 QWYPVLGVKHVDPGRAHPVQLLGKNLVVWRNKEGRWSCFDDRCPHRAAPLTEGRIEDDGS 69
Query: 141 LECLYHGWQFEGEGKCVKIPQLP---ADAKIPRSACVRTYEVKESQGVVWVWM------- 190
L C YH W+F+ +GKC+ IPQ D P+ AC + Y + +Q ++WVW
Sbjct: 70 LLCAYHAWRFDADGKCLSIPQSDRGGKDEAQPK-ACAKVYPTQVAQDIIWVWAENGPDAG 128
Query: 191 --SQKTPPNPDKLPWF---ENFARPGFQDVSTIH-ELPYDHSILLENLMDPAHIPISHDR 244
S TPP+ LP E A H +L Y ++ENL+DP+H+P +H
Sbjct: 129 LESALTPPH--LLPELDDEEGLASGRVVPQGVQHTDLAYGWDTMIENLVDPSHVPCAHHG 186
Query: 245 TDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAP-----CVLQNNREL 299
+ +D +P+ E + D + P C L +
Sbjct: 187 VA-GDRYKDVRPIDLEPDKEWPVTATVLVENADDAGELKMTLYGVPTKPGWCRLVGRQAY 245
Query: 300 VDSKTGEKHYFTGLFL-CRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQD 358
V + L + G+ S L+V + + P+W H +A QD
Sbjct: 246 VHKYAPKSKEAKALRKENKRLGKKPSELMV------AASIMSKIPQWLMHASAGIFLYQD 299
Query: 359 MGFLSSQNEVLM------KETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMP 405
M L Q++ L T + +D V RKW+ G G P
Sbjct: 300 MVLLHHQDKTLASVGHDGNSTSSYGKAVYTPAPADRAVMAVRKWIATHGSGGP 352
>gi|88857937|ref|ZP_01132579.1| putative oxidase [Pseudoalteromonas tunicata D2]
gi|18643160|gb|AAL76235.1|AF441246_1 LppA [Pseudoalteromonas tunicata]
gi|88819554|gb|EAR29367.1| putative oxidase [Pseudoalteromonas tunicata D2]
Length = 370
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 90/163 (55%), Gaps = 4/163 (2%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WY + T+DV P+G+ ++ +VLY+D GEL C DRCPH+ KLS GQ +
Sbjct: 5 QWYAILRTQDV-KKKPVGIKRLEKLLVLYRDTAGELVCLDDRCPHKGVKLSLGQQHGDLI 63
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMS--QKTPPNPD 199
C YHG+Q++ +G CV +P L +P+ CV++Y+VKE G++W W ++ PD
Sbjct: 64 ACPYHGFQYDQQGDCVHMPVLGQKGNVPKGMCVKSYKVKEELGLIWFWFGDVRQEHEYPD 123
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+P F+ + P +++ +E++ + HIP H
Sbjct: 124 -IPMFKQLKEYKGHYSYYGWDAPINYTRYVESVCEIYHIPFVH 165
>gi|434381532|ref|YP_006703315.1| rieske (2Fe-2S) domain-containing protein [Brachyspira pilosicoli
WesB]
gi|404430181|emb|CCG56227.1| rieske (2Fe-2S) domain-containing protein [Brachyspira pilosicoli
WesB]
Length = 328
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 143/337 (42%), Gaps = 39/337 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +K+V + PL ++ ++ ++D N + C +D+C HR A LS G++ +
Sbjct: 6 WYGVLDSKEVKKNKPLFAKRLNKNLMFWRDENNNICCIEDKCCHRGASLSHGKVCGNNIA 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C +HG+QF GK V IP + ++ V +YEV+E G++W+W K N DK+
Sbjct: 66 CPFHGFQFNKNGKVVMIPANGKNTQVDERFFVESYEVRELYGLIWLWYGDKDKIN-DKIM 124
Query: 203 WFENFARPGFQDVSTIHELPYDH-SILLENLMDPAHIPISHDRTDWTAKR---------- 251
+ ++ F STI + ++H + +EN +D H+ H T +
Sbjct: 125 FPDDLKDKKFS-YSTIRDEWHNHYTRCIENQLDVVHVAFVHYNTIGKGNKTLVNGPLVEL 183
Query: 252 -EDAQPLGFEVTERTDRGFAGRWGKE-KDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHY 309
ED L F V D G E K E FL F P + QN EK
Sbjct: 184 NEDTNTLKFYVNNVIDNGQKALSASEMKKEDFKYFLYFYFPNIWQN-------YIFEKMR 236
Query: 310 FTGLFLCRPTGQGKSMLIVRF-GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEV 368
F P +++ +RF P+ K + + ++ V +QD + +Q
Sbjct: 237 VFAAFA--PVDDENTVVYIRFYQKVVNIPIIKNIVNFIGKKFSAYVLKQDKDVVKTQ--- 291
Query: 369 LMKETVPTKELYLNLRSS-----DTWVAEYRKWMDKV 400
+KE YL ++ D + YR DK+
Sbjct: 292 ------SSKESYLGMKEEKLIPGDMPIIAYRSHRDKL 322
>gi|325517532|gb|ADZ25004.1| Rieske (2Fe-2S) domain-containing protein [Sorangium cellulosum]
Length = 337
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 2/161 (1%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
EWY + + V D P+GL Q IVL++ +G + C DRCPHR AKLS G++ G +
Sbjct: 5 EWYAVLESHRVRRD-PVGLKRLGQDIVLWRQSSGNVACLIDRCPHRGAKLSVGRVAQGCI 63
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
EC YHG+ F+ G C +P AD +P+ V ++ V+E G++WVW + P +
Sbjct: 64 ECPYHGFLFDAGGACRYVPANGADRPVPKGLHVDSWPVREEHGLIWVWWGESRSEYP-PV 122
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
PWF A + + ++ +EN +D H P H
Sbjct: 123 PWFPQPASDEAHAAESSGVYNFHYARAIENALDAHHFPFIH 163
>gi|356552681|ref|XP_003544691.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 534
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 156/345 (45%), Gaps = 44/345 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++ V+++ +G+ C Q+ C HR L G + +GR++
Sbjct: 213 WYPVAFSNDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQ 272
Query: 143 CLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 199
C YHGW++ +GKC K+P + KI C E +G++W+W P P
Sbjct: 273 CPYHGWEYTTDGKCEKMPSTQQLNVKIKSVPCF------EREGMIWIWPGNDPPTATLPS 326
Query: 200 KLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
LP GF+ + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 327 LLP------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 378
Query: 259 FEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE---------KHY 309
+T + G G W +P P + F PC++ + + SK G +
Sbjct: 379 NFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI--SKPGRLEGQSTRECSTH 429
Query: 310 FTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQNE 367
L +C P+ + K+ L+ R + +PL K P K+ + A +V +D+ + Q E
Sbjct: 430 LHQLHVCLPSSKQKTRLLYRM-SLDFAPLLKHIPLMKYLWRHFAEQVLNEDLRLVVGQQE 488
Query: 368 VLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMP-YHFGHS 411
+ ++ + D YR W D + G+ F HS
Sbjct: 489 RMNNGA----NVWNFPVAYDKLGVRYRMWRDALERGVKQLPFSHS 529
>gi|220926846|ref|YP_002502148.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium
nodulans ORS 2060]
gi|219951453|gb|ACL61845.1| Rieske (2Fe-2S) domain protein [Methylobacterium nodulans ORS 2060]
Length = 361
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 134/316 (42%), Gaps = 37/316 (11%)
Query: 101 TVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 160
T+ D IVLY+ +G++ +D C HRL LS G L + C YHG F G+C
Sbjct: 29 TICDTGIVLYRRTDGQVAALEDACWHRLLPLSLGHLHGDEVVCGYHGLIFNPAGRCTF-- 86
Query: 161 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFE-NFARPGFQDVSTIH 219
+PA I SACVR + V E ++WVWM +PD +P F N P + T +
Sbjct: 87 -MPAQETINPSACVRAFPVVERYRLIWVWMGDPALADPDTVPDFHWNSDAPWVGEGGTFY 145
Query: 220 ELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDE 279
L D+ ++++NLMD H H + E FEVT + RW E E
Sbjct: 146 SLQCDYRLVIDNLMDLTHETYVHAG---SIGDEAITRNPFEVTHTDRKVTVERW-MENIE 201
Query: 280 PLPNFLR---------------FEAPCVLQNNRELVDSKTGEK-----HYFTGLFLCRPT 319
P P + R FEAPCV+ + + + TG + G FL T
Sbjct: 202 PPPFWARLLGRPGHVDRWQIIHFEAPCVVAGDVGVALTGTGARQGDRSQGVNGFFLAAIT 261
Query: 320 GQGKSML-----IVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETV 374
+ + VR T + L + + +Q V++QD L +Q + K
Sbjct: 262 PETGTSCHYFWNFVRNFRTDDAELTRSLNLAHVNQ-GRGVYDQDHDVLEAQQRAISKN-- 318
Query: 375 PTKELY-LNLRSSDTW 389
P + Y LN+ + W
Sbjct: 319 PRQPFYNLNIDAGALW 334
>gi|356549331|ref|XP_003543047.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 532
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 153/336 (45%), Gaps = 43/336 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++ V+++ +G+ C Q+ C HR L G + +GR++
Sbjct: 213 WYPVAFSNDLKDDTMIPIECFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGSVNEGRIQ 272
Query: 143 CLYHGWQFEGEGKCVKIPQL-PADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 199
C YHGW++ +GKC K+P + KI C E +G++W+W P P
Sbjct: 273 CPYHGWEYTTDGKCEKMPSTRQLNVKIKSVPCF------EKEGMIWIWPGNDPPAATLPS 326
Query: 200 KLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
LP GF+ + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 327 ILP------PSGFEIHAEIVMELPIEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 378
Query: 259 FEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE---------KHY 309
+T + G G W +P P + F PC++ + + SK G+ +
Sbjct: 379 NFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI--SKPGKLEGQSTRECSTH 429
Query: 310 FTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQNE 367
L +C P+ + K+ L+ R + +PL K P K+ + A +V +D+ + Q E
Sbjct: 430 LHQLHVCLPSSKQKTRLLYRM-SLDFAPLLKHIPLMKYLWRHFAEQVLNEDLRLVVGQQE 488
Query: 368 VLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
+ ++ + D YR W D + G
Sbjct: 489 RMNNGA----NVWNFPVAYDKLGVRYRMWRDALERG 520
>gi|115483526|ref|NP_001065433.1| Os10g0567400 [Oryza sativa Japonica Group]
gi|75247969|sp|Q8S7E1.1|CAO_ORYSJ RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Flags: Precursor
gi|18855011|gb|AAL79703.1|AC087599_22 putative chlorophyll synthase [Oryza sativa Japonica Group]
gi|110289596|gb|ABB48002.2| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113639965|dbj|BAF27270.1| Os10g0567400 [Oryza sativa Japonica Group]
gi|215694378|dbj|BAG89371.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185043|gb|EEC67470.1| hypothetical protein OsI_34701 [Oryza sativa Indica Group]
gi|222613297|gb|EEE51429.1| hypothetical protein OsJ_32509 [Oryza sativa Japonica Group]
Length = 541
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 152/336 (45%), Gaps = 41/336 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++Q V+++ +G C + C HR L G + +GR++
Sbjct: 220 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQ 279
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 200
C YHGW++ +GKC K+P + +R+ E +G+VW+W P + P
Sbjct: 280 CPYHGWEYSTDGKCEKMPSTKM-----LNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSL 334
Query: 201 LPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 335 LP------PSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVK 386
Query: 260 EVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE---------KHYF 310
+T + G G W +P P + F PC++ + + SK G+ +
Sbjct: 387 FLTPSS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI--SKPGKLEGKSTKQCSTHL 437
Query: 311 TGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWY--FHQNASKVFEQDMGFLSSQNEV 368
L +C P+ + K+ L+ R + +P K P + + A KV +D+ + Q E
Sbjct: 438 HQLHICLPSSRNKTRLLYRM-SLDFAPWIKHVPFMHILWSHFAEKVLNEDLRLVLGQQER 496
Query: 369 LMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGM 404
++ ++ S D YR W D + G+
Sbjct: 497 MINGA----NVWNWPVSYDKLGIRYRLWRDAIERGV 528
>gi|429125292|ref|ZP_19185824.1| Rieske (2Fe-2S) domain-containing protein [Brachyspira hampsonii
30446]
gi|426278846|gb|EKV55876.1| Rieske (2Fe-2S) domain-containing protein [Brachyspira hampsonii
30446]
Length = 330
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 139/336 (41%), Gaps = 37/336 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +K+V + PL ++ +V ++D N + C D+C HR A LS G++ +
Sbjct: 6 WYAVLDSKEVKKNKPLFAKRLNKNLVFWRDSNNNICCIDDKCCHRGASLSHGKVCGNNIA 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C +HG+QF+ GK V IP + ++ ++ V YEV++ G +W+W K N DK+
Sbjct: 66 CPFHGFQFDKSGKTVMIPANGKNTEVNKNFFVEGYEVRDLYGFIWLWYGDKDKIN-DKIM 124
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKR----------- 251
+ ++ F + E ++ +EN +D HI H T +
Sbjct: 125 FPDDLKDKKFSYSTIKDEWNNHYTRCIENQLDVVHIAFVHHNTIGRGNKTIVNGPLAELD 184
Query: 252 EDAQPLGFEVTERTDRGFAGRWGKE-KDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYF 310
ED L F V D G E K E FL F P QN EK
Sbjct: 185 EDNNILKFYVNNVIDNGQKALSASEMKKEDFKYFLYFYFPNTWQN-------YIFEKMRI 237
Query: 311 TGLFLCRPTGQGKSMLIVRF-GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVL 369
G+F P +++ +RF P K + + + V +QD + +Q++
Sbjct: 238 FGVFA--PVDDENTVIYMRFYQKIVNIPFIKNIINFIGKKYSDIVLKQDKNVVKTQSK-- 293
Query: 370 MKETVPTKELYLNLR-----SSDTWVAEYRKWMDKV 400
E YL ++ S D + YR DK+
Sbjct: 294 -------NESYLGMKGEKLISGDKPIIIYRSTRDKL 322
>gi|149920331|ref|ZP_01908801.1| oxidase-related protein [Plesiocystis pacifica SIR-1]
gi|149818773|gb|EDM78215.1| oxidase-related protein [Plesiocystis pacifica SIR-1]
Length = 354
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 110/213 (51%), Gaps = 18/213 (8%)
Query: 81 EEWYPLYLTKDV--PDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLID 138
E W+ + + +++ P+ L F +VL++D G+LR DRCPHR A LS G + D
Sbjct: 5 EAWHVIAIRRELRRAHREPVALRRFGLDLVLWRDAEGKLRAVLDRCPHRSASLSAGAVKD 64
Query: 139 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ-KTPPN 197
G++EC +HG++++GEG CVK+P +A+ PR +E++E+ +VW+W Q + +
Sbjct: 65 GQIECPFHGFRWDGEGNCVKVPCNGPEAQRPRHLANTAFELREAHDMVWMWWGQPRAAGD 124
Query: 198 PDKLPWFENFARPGFQDVSTIHELPYDHSIL-----LENLMDPAHIPISHDRTDWTAKRE 252
+LPW FA D +H+ + + + +EN +D AH+P +H T T
Sbjct: 125 YPELPWSGPFA---AVDEGYVHDTLVETTQVGWMRNVENQLDWAHLPFAHHNTIGTGF-- 179
Query: 253 DAQPLGFEVTERTDRGFAGRWGK--EKDEPLPN 283
P EV D W E DE +P+
Sbjct: 180 ---PPDIEVRAELDGDLLSCWPAHYEDDEGVPH 209
>gi|152979928|ref|YP_001352913.1| vanillate monooxygenase subunit alpha [Janthinobacterium sp.
Marseille]
gi|151280005|gb|ABR88415.1| vanillate monooxygenase, alpha subunit [Janthinobacterium sp.
Marseille]
Length = 358
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 105/206 (50%), Gaps = 20/206 (9%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLID 138
W++E YLT+ + + +++Y+ +G DRCPH+LA LS G+L
Sbjct: 14 WSKEVGRQYLTR----------RILGEPVLMYRKEDGSPVALLDRCPHKLAPLSLGELKG 63
Query: 139 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
+EC YHG QF+ G CV++P P +IP +A V+++ + E VW+WM + T NP
Sbjct: 64 DIVECGYHGLQFDCSGTCVRVPGQP---QIPPTAQVKSFPLVERYNAVWIWMGEATLANP 120
Query: 199 DKLPWFENFARPGFQ--DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
D + E + PG+ D +H ++ + +NL+DPAH H T A E+
Sbjct: 121 DDIVEVERYQMPGWDLIDGQYLH-FKSNYLNITDNLVDPAHTTYVHKNTIGNAAGEN--- 176
Query: 257 LGFEVTERTDRGFAGRWGKEKDEPLP 282
+ +V + + A RW E EP+P
Sbjct: 177 VAVKVEQGDNHVLAYRW-IENAEPIP 201
>gi|393719683|ref|ZP_10339610.1| Rieske (2Fe-2S) protein [Sphingomonas echinoides ATCC 14820]
Length = 326
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 81/149 (54%), Gaps = 7/149 (4%)
Query: 95 DAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 154
DAP+ +T+ IVL++D +G+ + DRCPHR LS G + DG + C YHGW+F+G G
Sbjct: 29 DAPVAITLQGAPIVLFRDADGQAQALHDRCPHRGVALSLGTVSDGTIACAYHGWRFDGAG 88
Query: 155 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPW-FENFARPGFQ 213
+C IP L D I +SA VR Y V E G VW+W P+ P + F R FQ
Sbjct: 89 RCRHIPSLREDQTI-KSAPVRRYPVAEQDGYVWLWTGTD---EPEGAPLAIDGFDR--FQ 142
Query: 214 DVSTIHELPYDHSILLENLMDPAHIPISH 242
+ EL + + +EN +D H +H
Sbjct: 143 WLQGAMELACEAILPIENNLDICHAAFTH 171
>gi|428316589|ref|YP_007114471.1| Rieske (2Fe-2S) iron-sulfur domain protein [Oscillatoria
nigro-viridis PCC 7112]
gi|428240269|gb|AFZ06055.1| Rieske (2Fe-2S) iron-sulfur domain protein [Oscillatoria
nigro-viridis PCC 7112]
Length = 356
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 5/169 (2%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
+ WY + + +V + PL ++++ IVL++D +G++ +DRCPHR KLS GQ+
Sbjct: 26 DRWYAIARSTEVQNQ-PLAAKIWNRAIVLFRDSSGKINALEDRCPHRQVKLSHGQVKGDL 84
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+EC YHGW+ G+C ++ L + K+P +R+Y VKE G +W++ +T
Sbjct: 85 IECAYHGWRLNARGECAEVDYLAENQKLPNCK-IRSYPVKEKNGFIWLFPGDETQAEKID 143
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTA 249
L + + ++ + +S L+ENLMD H H DW A
Sbjct: 144 LLDLSEWEHLNYIATVSVIDCQAHYSFLIENLMDMYH---GHLHDDWQA 189
>gi|342209969|gb|AEL16995.1| McpG [Streptomyces longispororuber]
Length = 347
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 94/167 (56%), Gaps = 4/167 (2%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WYP+ T D+ DAP G+ +++VL++D +G L C RCPH+ A L++G+L+ +
Sbjct: 5 QWYPILRTDDIKRDAPTGVRRMGEELVLWRDLDGNLVCQSARCPHKGANLADGRLVGNSV 64
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-K 200
C YHG++F +G C +P L ++ ++P S V TYEV+E +VW+W K P+ +
Sbjct: 65 ACPYHGFRFGTDGACRLVPALGSEGRVPASLRVDTYEVREKYDLVWLWWGDKRANLPEIE 124
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDW 247
LP E P + T P ++ +E+L++ H+ H R W
Sbjct: 125 LP-HELAEHPRPYETITFSR-PVHYTRYIESLLEFYHVTFVH-RDHW 168
>gi|119512027|ref|ZP_01631122.1| Rieske (2Fe-2S) region protein [Nodularia spumigena CCY9414]
gi|119463317|gb|EAW44259.1| Rieske (2Fe-2S) region protein [Nodularia spumigena CCY9414]
Length = 357
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 84/157 (53%), Gaps = 6/157 (3%)
Query: 107 IVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADA 166
I LY+D G++ +DRCPHR KLS GQ+I LEC YHGW+F G+C +P L +
Sbjct: 54 IALYRDSTGKIHALEDRCPHRQVKLSHGQVIGNELECAYHGWRFNSAGECAAVPYLAENQ 113
Query: 167 KIPRSACVRTYEVKESQGVVWVWMSQKTPP-NPDKLPWFENFARPGFQDVSTIHELPYDH 225
K+P + +R Y VKE G +W++ + P P LP +E+ VS IH + +
Sbjct: 114 KLP-TCEIRHYPVKEQDGFIWLFPGKAEPSVEPLGLPEWEHLNY--IATVSVIHTQAH-Y 169
Query: 226 SILLENLMDPAHIPISHDRTDWT-AKREDAQPLGFEV 261
S L+ENLMD H + D W A +D + V
Sbjct: 170 SYLIENLMDMYHGHLHQDLQAWAEASLQDIDENNYRV 206
>gi|5478797|dbj|BAA82479.1| chlorophyll b synthase [Oryza sativa]
Length = 356
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 152/336 (45%), Gaps = 41/336 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++Q V+++ +G C + C HR L G + +GR++
Sbjct: 35 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQ 94
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 200
C YHGW++ +GKC K+P + +R+ E +G+VW+W P + P
Sbjct: 95 CPYHGWEYSTDGKCEKMPSTKM-----LNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSL 149
Query: 201 LPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 150 LP------PSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVK 201
Query: 260 EVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE---------KHYF 310
+T + G G W +P P + F PC++ + + SK G+ +
Sbjct: 202 FLTPSS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI--SKPGKLEGKSTKQCSTHL 252
Query: 311 TGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWY--FHQNASKVFEQDMGFLSSQNEV 368
L +C P+ + K+ L+ R + +P K P + + A KV +D+ + Q E
Sbjct: 253 HQLHICLPSSRNKTRLLYRM-SLDFAPWIKHVPFMHILWSHFAEKVLNEDLRLVLGQQER 311
Query: 369 LMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGM 404
++ ++ S D YR W D + G+
Sbjct: 312 MINGA----NVWNWPVSYDKLGIRYRLWRDAIERGV 343
>gi|397615617|gb|EJK63540.1| hypothetical protein THAOC_15793 [Thalassiosira oceanica]
Length = 883
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 27/290 (9%)
Query: 64 SAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDR 123
S EE ++ + + WY + V + ++ + +VLY+D +G L C +D
Sbjct: 377 SVEEGIQSQKFDSASFNDHWYAVAYPWQVKEGEVFATRLWGEPLVLYRDSDGNLVCSKDV 436
Query: 124 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKI-----PRSACVRTY 177
CPHR A LS G++ D G+LEC+YHGW F +G IP D P+ +C++TY
Sbjct: 437 CPHRSAPLSMGKINDEGQLECMYHGWGFGKDGNIESIPTQIRDGGSSKRSPPKRSCLKTY 496
Query: 178 EVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 237
V+E +G++W+W + + KLP + + + T+ + D ++EN +D H
Sbjct: 497 CVEEHEGLIWIWRGELLEADASKLPKTRDVST---YPIDTVLDYNVDWQYIVENNLDSPH 553
Query: 238 IPISHDRT-----DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCV 292
+ H+ + RE + + R D G G +G+ P +RF++P +
Sbjct: 554 LFWLHNGSVPPVRSLNFVREKVNQVKLQYF-RDDSGH-GHYGQTAGGK-PKIVRFDSPNI 610
Query: 293 LQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLF 342
+++ G F+ F P G++ +++R K P+ LF
Sbjct: 611 VRH---------GGTSSFSEEFHIVPIAPGRTRVLLRQNLPK-GPIVSLF 650
>gi|110289597|gb|ABB48003.2| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
Length = 526
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 152/336 (45%), Gaps = 41/336 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++Q V+++ +G C + C HR L G + +GR++
Sbjct: 205 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQ 264
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 200
C YHGW++ +GKC K+P + +R+ E +G+VW+W P + P
Sbjct: 265 CPYHGWEYSTDGKCEKMPSTKM-----LNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSL 319
Query: 201 LPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 320 LP------PSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVK 371
Query: 260 EVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE---------KHYF 310
+T + G G W +P P + F PC++ + + SK G+ +
Sbjct: 372 FLTPSS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI--SKPGKLEGKSTKQCSTHL 422
Query: 311 TGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWY--FHQNASKVFEQDMGFLSSQNEV 368
L +C P+ + K+ L+ R + +P K P + + A KV +D+ + Q E
Sbjct: 423 HQLHICLPSSRNKTRLLYRM-SLDFAPWIKHVPFMHILWSHFAEKVLNEDLRLVLGQQER 481
Query: 369 LMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGM 404
++ ++ S D YR W D + G+
Sbjct: 482 MINGA----NVWNWPVSYDKLGIRYRLWRDAIERGV 513
>gi|339503621|ref|YP_004691041.1| vanillate O-demethylase oxygenase [Roseobacter litoralis Och 149]
gi|338757614|gb|AEI94078.1| putative vanillate O-demethylase oxygenase subunit [Roseobacter
litoralis Och 149]
Length = 356
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + ++ DD + ++L++ +G + +D CPHR LS G+ I ++
Sbjct: 9 WYVAAWSTEI-DDELRRFVILGDPVLLFRRTDGRVAALEDVCPHRQLPLSMGKRIGDTVQ 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F+ +GKCV++ P +IP SACV Y ++E G+VW+WM + NPD +
Sbjct: 68 CGYHGLTFDTDGKCVRV---PGQDRIPLSACVDAYPIEERSGIVWIWMGEPERANPDDI- 123
Query: 203 WFENFARPGFQDVS-------TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ 255
F P F D S +H + ++ + ENL+DPAH+ H+ T + E+
Sbjct: 124 ----FDLPQFHDDSWHMHHGGALH-IESNYLNVAENLVDPAHVSFVHETTLGNSASEN-- 176
Query: 256 PLGFEVTERTDRGFAGRWGKEKDEPLPNFLRF 287
+ V+ + A RW ++ EP+ F F
Sbjct: 177 -VPVHVSTEGEEIIAWRWIRDS-EPIGFFKAF 206
>gi|339444691|ref|YP_004710695.1| ferredoxin subunit of nitrite reductase [Eggerthella sp. YY7918]
gi|338904443|dbj|BAK44294.1| ferredoxin subunit of nitrite reductase [Eggerthella sp. YY7918]
Length = 323
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 111/225 (49%), Gaps = 14/225 (6%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WY + + +V P+G+ F +++VL++D NGE+ C C HR A L+ G++ +G +
Sbjct: 5 QWYAILSSSEVKKGTPVGVVRFGRRLVLWRDENGEVACLDGTCCHRGADLATGRVCEGHV 64
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C +HG ++ +G V IP DA++P + VR++ ++ G +WV+ K PD L
Sbjct: 65 CCPFHGLRYAADGHVVTIPANGRDAEVPENFLVRSWLAVDAFGFIWVFYG-KPEDAPDDL 123
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT---------DWTAKRE 252
P F F R GF +S +EN +D H+P H T + +
Sbjct: 124 PMFAEF-RSGFPFAERSEVWNVHYSRAIENQLDVIHLPFVHPNTIGRGHKTLVNGPVTKW 182
Query: 253 DAQPLGFEVTERTDRGFAGRWGKEKD--EPLPNFLRFEAPCVLQN 295
DA L F V DRG + +E + E L N L++ P + QN
Sbjct: 183 DADTLTFYVKNEPDRGQKPQTAEEIENWEQL-NSLQYRVPNLWQN 226
>gi|81300844|ref|YP_401052.1| hypothetical protein Synpcc7942_2035 [Synechococcus elongatus PCC
7942]
gi|81169725|gb|ABB58065.1| hypothetical protein Synpcc7942_2035 [Synechococcus elongatus PCC
7942]
Length = 345
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 106/229 (46%), Gaps = 13/229 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ L + V D PL +T+ + I LY+D G++ DRC HR A LS G + + L
Sbjct: 7 WYPVALAQKV-GDRPLSVTLCGEAIALYRDSAGQIHALSDRCVHRGAALSGGWVENDCLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQ++ +G C KIP +IP +A V Y+ E G+VW++ + LP
Sbjct: 66 CPYHGWQYDAQGHCRKIPANTEQQRIPFAAKVPHYDAIERYGLVWLFYGDLPEADRPPLP 125
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE-- 260
+ P ++ V ++ + ENLMD AH P +H + A +P E
Sbjct: 126 PLPEYDDPAWRTVQGEVTYTTHYTRVTENLMDFAHAPFTHSGSFGAASDPLIEPYKVEQL 185
Query: 261 ------VTERTDRGFAGRWG--KEKDEP--LPNFLRFEAPCVLQNNREL 299
T+ T + G W D P + + PC+++ +L
Sbjct: 186 PDGLRAQTQFTKSAYRGIWKLFNRGDAPRTVTTTITLYMPCIVRTETDL 234
>gi|390167216|ref|ZP_10219213.1| putative Rieske protein [Sphingobium indicum B90A]
gi|389590161|gb|EIM68162.1| putative Rieske protein [Sphingobium indicum B90A]
Length = 430
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 7/206 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L+ +V + ++++++ GE QDRCPHR A LS G + +
Sbjct: 80 WYVAALSSEVDATQLFHRRILGMSVLIFRNAQGEAVALQDRCPHRFAPLSMGSRVGDAIA 139
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F+ G CV P ++PR VR + + E G +W+WM+++ +P LP
Sbjct: 140 CPYHGLRFDAGGHCVHNPH--GRGQLPRGQVVRGFPLIERHGFIWIWMAEEA-ADPALLP 196
Query: 203 WFENFARPGFQDVS-TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
F R V T +LP D+ ++L+N+MD +H+ H T R PL +V
Sbjct: 197 DFSPLDRGHANGVGHTYMKLPVDYRLILDNVMDLSHVDYVHGEIITT--RGQLSPLIPQV 254
Query: 262 TERTDRGFAGRWGKEKDEPLPNFLRF 287
E T+ + W + P+ F F
Sbjct: 255 -EETENSVSASWDYSQTPPIGIFAPF 279
>gi|260427622|ref|ZP_05781601.1| rieske domain protein [Citreicella sp. SE45]
gi|260422114|gb|EEX15365.1| rieske domain protein [Citreicella sp. SE45]
Length = 356
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 11/207 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + ++ DD T+ + +V+++ +G + +DRCPHRL LS+G+ I ++
Sbjct: 9 WYVAGWSTEI-DDELRRFTILGEHVVMFRTSDGSVAALEDRCPHRLLPLSKGKRIGDTVQ 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F+ G CV++ P +P+SA V Y + E G+VW+WM +P+ +
Sbjct: 68 CGYHGLTFDCSGACVRV---PGQTNLPKSAYVEAYPIVEKHGIVWIWMGDAEKADPEAVF 124
Query: 203 WFENFARPGF--QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
F PG+ +H L ++ + ENL+DPAH+ H T A E+ +
Sbjct: 125 DMPEFTDPGWAAHHGDALH-LKSNYLNVAENLVDPAHVSFVHPTTLGNAASEN---VPVH 180
Query: 261 VTERTDRGFAGRWGKEKDEPLPNFLRF 287
V + A RW ++ EP+ F F
Sbjct: 181 VQTEGEAIVAWRWIRDA-EPIGFFKAF 206
>gi|416384569|ref|ZP_11684646.1| C3: Vanillate O-demethylase oxygenase-like protein [Crocosphaera
watsonii WH 0003]
gi|357265012|gb|EHJ13825.1| C3: Vanillate O-demethylase oxygenase-like protein [Crocosphaera
watsonii WH 0003]
Length = 355
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 22/200 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + ++++ P+ + ++ + IVLY+D G++ +RCPHR KLSEG+++ LE
Sbjct: 13 WYVVAQSREITT-KPIEVKLWYRSIVLYRDSTGKIHGLDNRCPHRQVKLSEGKVVGNSLE 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAK--------IPRSACVRTYEVKESQGVVWVWMSQK- 193
C YHGWQF G+G C IP L ++ +PRS + +Y V+E G VW+++ +K
Sbjct: 72 CAYHGWQFNGQGSCTFIPYLNSNLNGKFSKNQALPRSQ-IESYPVQEDDGFVWIFLGEKH 130
Query: 194 ----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTA 249
P +P +++ G VS I + S L+ENLMD H + D WT
Sbjct: 131 LLESKQVQPMSIPEWQHLNYIG--TVSVI-DCQAHFSFLIENLMDMYHGHLHDDYQAWT- 186
Query: 250 KREDAQPLGFEVTERTDRGF 269
DA+ TE +G
Sbjct: 187 ---DAKLKELLTTEEGVKGL 203
>gi|423696631|ref|ZP_17671121.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q8r1-96]
gi|388003531|gb|EIK64858.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q8r1-96]
Length = 357
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++ LG T+ +Q IV +++ G ++ DRCPHR A L G+++ ++
Sbjct: 8 WYIAGWADELAQGGMLGRTIVEQPIVFFRNSQGAIQALADRCPHRFAPLHMGKIVGDSVQ 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F+G G+C P D IP++ACVR + V E G +WVW N +P
Sbjct: 68 CPYHGLRFDGSGQCTHNPH--GDGSIPKAACVRAFAVAERHGAIWVWPGDPNLANDALIP 125
Query: 203 WFENFARPGFQDVSTIHELPY--DHSILLENLMDPAHIPISHDRT 245
F F + D LP + +L +N+MD +H+ H T
Sbjct: 126 DFSFFEQ-APTDAKGHGYLPTRAHYELLADNIMDLSHVDFLHPDT 169
>gi|67921495|ref|ZP_00515013.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
gi|67856607|gb|EAM51848.1| Rieske [2Fe-2S] region [Crocosphaera watsonii WH 8501]
Length = 355
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 22/200 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + ++++ P+ + ++ + IVLY+D G++ +RCPHR KLSEG+++ LE
Sbjct: 13 WYVVAQSREITT-KPIEVKLWYRSIVLYRDSTGKIHGLDNRCPHRQVKLSEGKVVGNSLE 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAK--------IPRSACVRTYEVKESQGVVWVWMSQK- 193
C YHGWQF G+G C IP L ++ +PRS + +Y V+E G VW+++ +K
Sbjct: 72 CAYHGWQFNGQGSCTFIPYLNSNLNGKFSKNQALPRSQ-IESYPVQEDDGFVWIFLGEKH 130
Query: 194 ----TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTA 249
P +P +++ G VS I + S L+ENLMD H + D WT
Sbjct: 131 LLESKQVQPMSIPEWQHLNYIG--TVSVI-DCQAHFSFLIENLMDMYHGHLHDDYQAWT- 186
Query: 250 KREDAQPLGFEVTERTDRGF 269
DA+ TE +G
Sbjct: 187 ---DAKLKELLTTEEGVKGL 203
>gi|330808946|ref|YP_004353408.1| vanillate monooxygenase subunit [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327377054|gb|AEA68404.1| putative vanillate monooxygenase, subunit [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 357
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 5/165 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++ LG T+ +Q IV +++ G ++ DRCPHR A L G+++ ++
Sbjct: 8 WYIAGWADELAQGGMLGRTIVEQPIVFFRNSQGAIQALADRCPHRFAPLHMGKIVGDSVQ 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F+G G+C P D IP++ACVR + V E G +WVW N +P
Sbjct: 68 CPYHGLRFDGSGQCTHNPH--GDGSIPKAACVRAFAVAERHGAIWVWPGDPNLANDALIP 125
Query: 203 WFENFARPGFQDVSTIHELPY--DHSILLENLMDPAHIPISHDRT 245
F F + D LP + +L +N+MD +H+ H T
Sbjct: 126 DFSFFEQ-APTDAKGHGYLPTRAHYELLADNIMDLSHVDFLHPDT 169
>gi|148554606|ref|YP_001262188.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499796|gb|ABQ68050.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 338
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 98/203 (48%), Gaps = 10/203 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L+ ++ D P+G + +VLY++ +G + DRCPHR LS G+ RL
Sbjct: 9 WYVAALSTEIAD-GPVGRRICSLPVVLYRERSGAVAALFDRCPHRFVPLSRGRCEGDRLV 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG ++G GKCV PQ + RS VR++ V+E G+VW+WM + +P
Sbjct: 68 CGYHGLAYDGAGKCVANPQ----GTVTRSLDVRSFPVEERHGLVWIWMGDPALRDTVAIP 123
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
F RP + ++ +N+MD +HI H T T K DA+ +
Sbjct: 124 DFSLLDRPAMRPQYGYMWTAAHFELMTDNIMDLSHIEFLHADTLGTEKIRDAK---VQAR 180
Query: 263 ERTDRGFAGRWGKEKDEPLPNFL 285
+ ++GR DE LP FL
Sbjct: 181 VEGETVYSGR--TVHDEILPPFL 201
>gi|110679615|ref|YP_682622.1| vanillate O-demethylase oxygenase [Roseobacter denitrificans OCh
114]
gi|109455731|gb|ABG31936.1| vanillate O-demethylase oxygenase, putative [Roseobacter
denitrificans OCh 114]
Length = 356
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + ++ DDA + ++L++ +G + +D CPHR LS G+ I ++
Sbjct: 9 WYVAAWSSEI-DDALRRFVILGDPVLLFRRTDGRVAALEDVCPHRQLPLSMGKRIGDTVQ 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F+ +GKCV++ P +IP SACV Y +E G+VW+WM + NPD +
Sbjct: 68 CGYHGLTFDTDGKCVRV---PGQDRIPPSACVDAYPTEERSGIVWIWMGEPERANPDDI- 123
Query: 203 WFENFARPGFQDVS-------TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ 255
F P F D S +H + ++ + ENL+DPAH+ H+ T + E+
Sbjct: 124 ----FDLPQFHDDSWHMHHGGALH-IKSNYLNVAENLVDPAHVSFVHETTLGNSASEN-- 176
Query: 256 PLGFEVTERTDRGFAGRWGKEKDEPLPNFLRF 287
+ V+ + A RW + EP+ F F
Sbjct: 177 -VPVHVSTSGEEIIAWRWIRNS-EPIGFFKAF 206
>gi|418472321|ref|ZP_13042068.1| oxidase, partial [Streptomyces coelicoflavus ZG0656]
gi|371547060|gb|EHN75473.1| oxidase, partial [Streptomyces coelicoflavus ZG0656]
Length = 384
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 72/114 (63%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WYP+ T++V +D PLG+ Q +VL++D +G L C RCPH+ A L +G++ +
Sbjct: 5 QWYPIVETQEVRNDKPLGVRRMGQDLVLWRDIDGNLVCQGARCPHKGANLGDGRMKGNTI 64
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 195
EC YHG+++ +G C IP + A A+IP S V TY V+E G+VW+W + P
Sbjct: 65 ECPYHGFRYGADGACRVIPAMGAQARIPGSLRVATYPVREQFGLVWMWWGDERP 118
>gi|398814683|ref|ZP_10573362.1| ring-hydroxylating dioxygenase, large terminal subunit
[Brevibacillus sp. BC25]
gi|398036162|gb|EJL29383.1| ring-hydroxylating dioxygenase, large terminal subunit
[Brevibacillus sp. BC25]
Length = 326
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 13/174 (7%)
Query: 74 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSE 133
V D EW Y + DV D P+ +T+ +++VL+++ G + ++D C HR A LS
Sbjct: 3 VQDTVLRNEWIVAYRSVDV-QDRPIQVTIMGERVVLFRNEEG-IHAFKDLCIHRGAALSL 60
Query: 134 GQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK 193
G + +G+L C YHGW++E G CVKIPQLPAD IP A Y E G VWV + +
Sbjct: 61 GCVREGKLVCPYHGWEYEASGACVKIPQLPADQAIPGKARAVLYGCAERYGFVWVNLGNQ 120
Query: 194 TPPNPDKLPWFENFARPGFQDV----STIHELPYDHSILLENLMDPAHIPISHD 243
+P D LP FE+ F++V T+ P ++EN +D H+ + H+
Sbjct: 121 SPEFFD-LPEFEDHH---FRNVIWGPQTVTAKP---PRIVENFLDVGHLAVVHE 167
>gi|296125678|ref|YP_003632930.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Brachyspira
murdochii DSM 12563]
gi|296017494|gb|ADG70731.1| Rieske (2Fe-2S) iron-sulfur domain protein [Brachyspira murdochii
DSM 12563]
Length = 330
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 140/336 (41%), Gaps = 37/336 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +++V + PL ++ +V ++D N + C D+C HR A LS G++ +
Sbjct: 6 WYAVLDSREVKKNKPLFAKRLNKNLVFWRDKNNNICCIDDKCCHRGASLSHGKVCVDNIA 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C +HG+QF+ GK V IP + ++ ++ V YEV++ G +W W K N DK+
Sbjct: 66 CPFHGFQFDKSGKTVIIPANGKNTEVNKNFFVSGYEVRDLYGFIWFWYGDKDKIN-DKIM 124
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKR----------- 251
+ ++ F S E ++ +EN +D H+ H T +
Sbjct: 125 FPDDLRDNKFSYSSIKDEWNNHYTRCIENQLDVVHVAFVHHNTIGRGNKTIVNGPLVESD 184
Query: 252 EDAQPLGFEVTERTDRGFAGRWGKE-KDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYF 310
ED+ L F V TD G E K E FL F P QN EK
Sbjct: 185 EDSNILKFYVNNVTDNGQKALNASEMKKEDFKYFLYFYFPNTWQN-------YIFEKMRI 237
Query: 311 TGLFLCRPTGQGKSMLIVRF-GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVL 369
G+F P +++ +RF P K + + + V +QD + +Q++
Sbjct: 238 FGVFA--PVDDENTVIYMRFYQKILNIPFIKNIINFIGKKYSDIVLKQDKNVVKTQSK-- 293
Query: 370 MKETVPTKELYLNLRSS-----DTWVAEYRKWMDKV 400
KE YL ++ D + YR DK+
Sbjct: 294 -------KESYLGMKEEKLIPGDKPIIMYRSIRDKL 322
>gi|238767600|dbj|BAH66639.1| chlorophyllide a oxygenase [Nephroselmis pyriformis]
Length = 297
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 134/296 (45%), Gaps = 26/296 (8%)
Query: 88 LTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHG 147
T + D + F++ VL++D +G+ C +D C HR LS G + +G+ C YHG
Sbjct: 4 FTSRLGKDIMVPFECFEESWVLFRDEDGKAGCIKDECAHRACPLSLGTVENGQATCAYHG 63
Query: 148 WQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENF 207
WQF G+C KIP + A+ VR E G++W+W + P + +P E
Sbjct: 64 WQFSTGGECTKIPSV--GARGCSGVGVRAMPTVEQDGMIWIWPGDEKP--AEHIPSKEVL 119
Query: 208 ARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTD 266
G + ++P +H +LLENL+D AH P +H T + A P + +
Sbjct: 120 PPAGHTLHAEIVLDVPVEHGLLLENLLDLAHAPFTHTS---TFAKGWAVPELVKFSTDKV 176
Query: 267 RGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL---------VDSKTGEKHYFTGLFLCR 317
R G W EP P + FE PC++ + L V + EKH L +C
Sbjct: 177 RALGGAW-----EPYPIDMSFEPPCMVLSTIGLAQPGKVDAGVRASECEKHLHQ-LHVCM 230
Query: 318 PTGQGKSMLIVRFGATKRSPLAKLFPKWY--FHQNASKVFEQDMGFLSSQNEVLMK 371
P+G GK+ L+ R P K P + + A++V +D+ + Q + L +
Sbjct: 231 PSGAGKTRLLYRM-HLDFMPFLKYVPGMHLVWEAMANQVLGEDLRLVLGQQDRLQR 285
>gi|312282087|dbj|BAJ33909.1| unnamed protein product [Thellungiella halophila]
Length = 534
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 170/376 (45%), Gaps = 44/376 (11%)
Query: 45 TDRSSTST----VGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGL 100
TD+ STST + K VG A G Q WYP+ T D+ D + +
Sbjct: 178 TDKPSTSTSVQDLDKEKTNVG-AKTLNVSGPVQPYSQQLKNFWYPVAFTADLKHDTMVPI 236
Query: 101 TVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 160
F+Q V+++ +G+ C ++ C HR L G + +GR++C YHGW++ +GKC K+P
Sbjct: 237 DCFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVKEGRIQCPYHGWEYSTDGKCTKMP 296
Query: 161 QLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 218
+ KI C+ E G++WVW PP+P LP + + GF +
Sbjct: 297 STKLLNVKIKSIPCL------EQDGMIWVWPGDD-PPSP-TLPSLQPPS--GFVIHAELV 346
Query: 219 HELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKD 278
+LP +H +LL+NL+D AH P +H T AK L +T + G G W
Sbjct: 347 MDLPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFLTPSS--GLQGYW----- 397
Query: 279 EPLPNFLRFEAPCVLQNNRELVDSKTGEKH---------YFTGLFLCRPTGQGKSMLIVR 329
+P P + F+ PC++ + + SK G+ + L +C P+ + K+ L+ R
Sbjct: 398 DPYPIDMEFKPPCIVLSTIGI--SKPGKLEGKSTKQCATHLHQLHVCLPSSRNKTRLLYR 455
Query: 330 FGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSD 387
+ +P+ K P + + A +V +D+ + Q E ++ ++ + D
Sbjct: 456 M-SLDFAPILKNVPFMEHLWRHFAEQVLNEDLRLVLGQQERMLNGA----NIWNLPVAYD 510
Query: 388 TWVAEYRKWMDKVGHG 403
YR W + V G
Sbjct: 511 KLGVRYRLWRNAVDRG 526
>gi|119504455|ref|ZP_01626534.1| Rieske (2Fe-2S) region protein [marine gamma proteobacterium
HTCC2080]
gi|119459477|gb|EAW40573.1| Rieske (2Fe-2S) region protein [marine gamma proteobacterium
HTCC2080]
Length = 364
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 120/247 (48%), Gaps = 13/247 (5%)
Query: 72 RQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKL 131
R+ D+ WY T ++ D P T+ ++ IV+YK+ +G +RC HR A L
Sbjct: 2 REAEDWFLYNCWYAAAWTSEIDDGKPFSRTLLEKPIVIYKNESGVYVALDNRCCHRSAPL 61
Query: 132 SEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMS 191
S G++ L C+YHG +++ G+CV+I P AKI + V +Y + + G++W+WM
Sbjct: 62 SMGRIEGDCLRCMYHGMKYDPSGQCVEI---PGQAKISSNHRVHSYPLVDRGGMLWIWMG 118
Query: 192 QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHS--ILLENLMDPAHIPISHDRTDWTA 249
+ N D +P FE P + + L YD + ++++NL D +H+ H T
Sbjct: 119 EAHKANSDDIPHFEPLDDPQWCGLPNRCYLHYDANWMLIVDNLADFSHLAFVHTST--LG 176
Query: 250 KREDAQPLGFEVTERTDRGFA-GRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH 308
ED + ++ D GF RW + ++ P +L+ P +VD + +
Sbjct: 177 GSEDYATESAQQVDKLDNGFEFERWHRGSEQ--PPYLQKITPWPAD---RIVDRRNFVRM 231
Query: 309 YFTGLFL 315
Y G+FL
Sbjct: 232 YTPGIFL 238
>gi|238767606|dbj|BAH66642.1| chlorophyllide a oxygenase [Pyramimonas parkeae]
Length = 338
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 28/256 (10%)
Query: 85 PLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECL 144
P+ + + ++ + L +F + VL++D G+ C QD+C HR LS G + +G + C
Sbjct: 1 PIEFSAQLVENTLIPLELFGEPWVLFRDAEGKAACLQDQCAHRACPLSLGSVQNGNVTCA 60
Query: 145 YHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWF 204
YHGWQF G+G C ++P P ++ V+ +V E G+++ W + P+ +P
Sbjct: 61 YHGWQFNGQGDCEEMPSTPH----CKNVGVKALQVTEKDGMIFAWTGEDDEPD---IPIP 113
Query: 205 ENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTE 263
E GF S I E+P +H +L+ENL+D AH P +H TA P+ V
Sbjct: 114 ELAPPAGFVIHSEITMEVPVEHGLLVENLLDLAHAPFTH-----TATFARGWPIPEAVRF 168
Query: 264 RTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL---------VDSKTGEKHYFTGLF 314
+G W +P P + F P + ++ L V +KH L
Sbjct: 169 HLLDKLSGNW-----DPYPIDMAFLPPVMTESKIGLNQPGKIERGVRCDECDKHLHQ-LH 222
Query: 315 LCRPTGQGKSMLIVRF 330
+C P +G + L+ R
Sbjct: 223 VCLPAKEGHTRLLYRM 238
>gi|449465447|ref|XP_004150439.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Cucumis
sativus]
gi|449513335|ref|XP_004164299.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Cucumis
sativus]
Length = 534
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 152/334 (45%), Gaps = 39/334 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ +D + F++ VL++ +G C ++ C HR L G + DGR++
Sbjct: 217 WYPVAFSSDLKNDIMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRACPLHLGSVNDGRVQ 276
Query: 143 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW++ +GKC K+P + KI C E +G++WVW P L
Sbjct: 277 CPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCF------EKEGMIWVWPGNDPPAA--NL 328
Query: 202 PWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
P + PGFQ + E+P +H +LL+NL+D AH P +H T AK L
Sbjct: 329 PSLK--PPPGFQIHAELVIEIPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKF 384
Query: 261 VTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE---------KHYFT 311
+T + G G W +P P + F PC++ + + SK G+ +
Sbjct: 385 LTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI--SKPGKLEGQSTRECSTHLH 435
Query: 312 GLFLCRPTGQGKSMLIVRFGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQNEVL 369
L +C P+ + K+ L+ R + +P+ K P + + A +V +D+ + Q E +
Sbjct: 436 QLHVCLPSTRQKTRLLYRM-SLDFAPVLKQIPFMHYLWRHFAEQVLNEDLRLVIGQQERM 494
Query: 370 MKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
V ++ S D YR W + V G
Sbjct: 495 ----VNGANIWNMPVSYDKLGVRYRLWRNAVEEG 524
>gi|238026710|ref|YP_002910941.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
glumae BGR1]
gi|237875904|gb|ACR28237.1| Iron-sulfur cluster-binding protein, Rieske family [Burkholderia
glumae BGR1]
Length = 345
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 91/182 (50%), Gaps = 7/182 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ DV D APL +T+ + + L++ G E +D+CPHR A+LS G + G+L
Sbjct: 13 WYPVARAVDVTD-APLAVTLLGEALALWRTGENEFGVVKDKCPHRSARLSGGWVDQGKLV 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW + G G CV+IPQ+P K V Y K G +WV + + PD
Sbjct: 72 CPYHGWTYNGVGACVRIPQMPQ-KKPSEKIVVDHYRCKTKYGYIWVALDEPIHDIPD--- 127
Query: 203 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
F A GF + E+ + +LEN +D +H H +T A+ + P +E
Sbjct: 128 -FPEAADAGFYRIHEFMEVWNCSGLRILENGLDNSHFAFVHRKTFGLAEMPEPAPARYED 186
Query: 262 TE 263
TE
Sbjct: 187 TE 188
>gi|172035343|ref|YP_001801844.1| oxygenase [Cyanothece sp. ATCC 51142]
gi|354555438|ref|ZP_08974739.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. ATCC
51472]
gi|171696797|gb|ACB49778.1| probable oxygenase [Cyanothece sp. ATCC 51142]
gi|353552497|gb|EHC21892.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. ATCC
51472]
Length = 344
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 98/174 (56%), Gaps = 10/174 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +V P+ + ++ IVLY+D G++ ++RCPHR KLSEG++++ LE
Sbjct: 13 WYVVAQSTEV-TTKPIEVRLWYHSIVLYRDSQGKIHGLENRCPHRQVKLSEGKVVENNLE 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK----TPP-N 197
C YHGW+F+ +G C IP L + +P+ + Y ++ES G +W+++ K +P
Sbjct: 72 CAYHGWRFDRQGMCSYIPYLSDNQGLPQCK-INVYPLEESDGFIWIFLGNKQLLESPTFK 130
Query: 198 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKR 251
P ++P +E+ G VS I + S L+ENLMD H + +D WT +
Sbjct: 131 PIRIPEWEHLNYIG--TVSFI-DCQAHFSFLIENLMDMYHGHLHNDYQAWTEAK 181
>gi|393778405|ref|ZP_10366679.1| oxidoreductase subunit alpha [Ralstonia sp. PBA]
gi|392714676|gb|EIZ02276.1| oxidoreductase subunit alpha [Ralstonia sp. PBA]
Length = 372
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 91/165 (55%), Gaps = 6/165 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI-DGRL 141
WYP+ + + GL V D+ IV+++ GE+ + DRC H+ LSE +L+ DGRL
Sbjct: 11 WYPVGFSHEFKAGDLQGLKVADKPIVIWRTAEGEVVAFDDRCCHKRFPLSESKLLDDGRL 70
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW---MSQKTPPNP 198
EC YHG ++ GKCV+IP P D IP A + T +KE GVVW+W + Q + NP
Sbjct: 71 ECAYHGLCYDSSGKCVEIPSQP-DKAIPPQARLHTVPIKEQDGVVWLWPGDVEQASTLNP 129
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
+ P + + I E P ++ +L+ENL+D +H HD
Sbjct: 130 PRTPELTDTSCVTAVSPERI-EAPANYLLLIENLLDISHFYPLHD 173
>gi|384209589|ref|YP_005595309.1| Rieske (2Fe-2S) domain-containing protein [Brachyspira intermedia
PWS/A]
gi|343387239|gb|AEM22729.1| Rieske (2Fe-2S) domain protein [Brachyspira intermedia PWS/A]
Length = 327
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 143/337 (42%), Gaps = 39/337 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +K+V + PL ++ +V ++D N + C D+C HR A LS G++ +
Sbjct: 6 WYAVLDSKEVKRNKPLFAKRLNKNLVFWRDSNNNICCIDDKCCHRGASLSHGKICGNNIA 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C +HG+QF+ GK V IP + ++ ++ V YEV+E G +W+W K N D++
Sbjct: 66 CPFHGFQFDKTGKTVMIPANGKNTEVNKNFFVEGYEVRELYGFIWLWYGDKDKIN-DRIM 124
Query: 203 WFENFARPGFQDVSTIHELPYDH-SILLENLMDPAHIPISHDRTDWTAKR---------- 251
+ ++ F STI + ++H + +EN +D HI H T +
Sbjct: 125 FPDDLKDKKFS-YSTIKDEWHNHYTRCIENQLDVVHIAFVHYNTIGRGNKTVVNGPLVEL 183
Query: 252 -EDAQPLGFEVTERTDRG-FAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHY 309
ED L F V D G A R + K E FL F P QN EK
Sbjct: 184 DEDNNILKFYVNNVIDSGQKALRESEMKKEDFKYFLYFYFPNTWQN-------YIFEKMR 236
Query: 310 FTGLFLCRPTGQGKSMLIVRF-GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEV 368
G+F P +++ +RF P + + + V +QD + +Q
Sbjct: 237 VFGVFA--PVDDENTVIYMRFYQKIVNIPFIRSIVNLIGKKYSDIVLKQDKNVVKTQ--- 291
Query: 369 LMKETVPTKELYLNLRSS-----DTWVAEYRKWMDKV 400
+KE YL ++ D + YR DK+
Sbjct: 292 ------SSKESYLGMKEEKLIQGDKPIIIYRSTRDKL 322
>gi|416952084|ref|ZP_11935493.1| Rieske (2Fe-2S) iron-sulfur domain [Burkholderia sp. TJI49]
gi|325523120|gb|EGD01521.1| Rieske (2Fe-2S) iron-sulfur domain [Burkholderia sp. TJI49]
Length = 337
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 4/154 (2%)
Query: 90 KDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQ 149
D DDAP+G + + +V Y++ ++ +D CPHR LS G + L C YHG +
Sbjct: 5 SDEIDDAPVGRVLLGEPVVFYRNAARKVVALEDACPHRKLPLSMGTVTGDHLRCGYHGLE 64
Query: 150 FEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFAR 209
F +G C + P L ++IP +ACV+ Y V E G+VW+WM +PD + E++
Sbjct: 65 FGADGACTRAPGL---SRIPPNACVKAYPVAERYGLVWIWMGAPDQADPDTILAVEHYGE 121
Query: 210 PGFQ-DVSTIHELPYDHSILLENLMDPAHIPISH 242
PG+ + + + + +NL+DP+H+ H
Sbjct: 122 PGWGVNRGPAMNVDCHYLYMTDNLLDPSHVAYVH 155
>gi|416952092|ref|ZP_11935501.1| Rieske (2Fe-2S) iron-sulfur domain [Burkholderia sp. TJI49]
gi|325523128|gb|EGD01529.1| Rieske (2Fe-2S) iron-sulfur domain [Burkholderia sp. TJI49]
Length = 349
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 110/225 (48%), Gaps = 20/225 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY KDV A +T+ ++IVLY+ +G +D CPHR+ LS G+L +E
Sbjct: 7 WYVAGWDKDVTR-ALTPVTMLGERIVLYRKADGTPVALEDACPHRMLPLSMGRLTGDDVE 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F+ G CV+ P A+IP A VR Y V E G+VWVWM + +PD L
Sbjct: 66 CGYHGLTFDCSGACVRA---PGSARIPAQAVVRRYPVAERYGLVWVWMGDEAAADPDALL 122
Query: 203 WFENFARPGF----QDVSTI--HELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
+ + P + D T+ H L + +NL+DP+H+ H R+ + +++P
Sbjct: 123 TIDEWDDPAWGLNRGDAMTVDCHYL-----YMTDNLLDPSHVAWVH-RSSFGNAACESEP 176
Query: 257 LGFEVTERTDRGFAGRWGKEKDEP--LPNFLRFEAPCVLQNNREL 299
L + + + RW ++ D F+RF C + + E+
Sbjct: 177 L--KTSAAANGVTVSRWMRDVDVAPFYAKFVRFAGRCDRKQHYEV 219
>gi|409409031|ref|ZP_11257466.1| phenylpropionate dioxygenase [Herbaspirillum sp. GW103]
gi|386432353|gb|EIJ45181.1| phenylpropionate dioxygenase [Herbaspirillum sp. GW103]
Length = 343
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 95/188 (50%), Gaps = 10/188 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L + D P T+ +++V++ +G QDRC HR AKLS+G + +G +
Sbjct: 13 WYALMPVSQL-KDGPQPFTLLGEKLVVWLKEDGTPAALQDRCCHRTAKLSKGFVENGNIV 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW F GEG CV++PQ D +P ACV++Y KE G VWV + + PD
Sbjct: 72 CGYHGWTFNGEGACVRVPQ-SVDGSVPSGACVKSYFCKERYGYVWVALEEPLRDIPD--- 127
Query: 203 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
F PG++ + +E + ++EN D +H H T + +P +E+
Sbjct: 128 -FPEDGAPGYRRIFQFYERWETSPLRMMENSFDNSHFSYVHRAT--FGLYDQPKPEKYEI 184
Query: 262 TERTDRGF 269
E TD GF
Sbjct: 185 NE-TDYGF 191
>gi|254430294|ref|ZP_05043997.1| rieske (2Fe-2S) domain protein [Cyanobium sp. PCC 7001]
gi|197624747|gb|EDY37306.1| rieske (2Fe-2S) domain protein [Cyanobium sp. PCC 7001]
Length = 330
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
Query: 95 DAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 154
DAP T+ ++ +LY+D G+ D+CPHR A G + L C YHGW F+ EG
Sbjct: 20 DAPCQATLLNRTYILYRDDTGQPHAAVDQCPHRGASFKAGWVEGSCLRCPYHGWSFDAEG 79
Query: 155 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD 214
CV+IP IP A + T V+ES G VW++ + +P +P F G++
Sbjct: 80 HCVRIPADQPGVPIPAQARLHTLPVQESSGFVWIFPGDPSLADPSLIPAFPELGAEGWRP 139
Query: 215 VSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTE 263
VS + + S ++E+ +D +H P H + R+DA L FEV E
Sbjct: 140 VSGEYLWHANFSRVVESGLDTSHAPFVH--KPFFPNRDDAAVLPFEVAE 186
>gi|167569836|ref|ZP_02362710.1| Rieske [Burkholderia oklahomensis C6786]
Length = 334
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 67/112 (59%), Gaps = 2/112 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D W PL L++ V +APLG+ + +VLY+D +G +R +DRC HR A LS G++
Sbjct: 10 DSAAHWLPLALSEQVNGEAPLGVVCMGRPLVLYRDASGAVRAMEDRCVHRRAPLSLGRIT 69
Query: 138 -DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 187
DGRL+C YHGW ++G G CV IP L ++P R YE +E G VW
Sbjct: 70 PDGRLQCGYHGWTYDGATGACVAIPNLSEHERVPAHYVARAYETRERDGFVW 121
>gi|351730088|ref|ZP_08947779.1| rieske (2Fe-2S) iron-sulfur domain-containing protein [Acidovorax
radicis N35]
Length = 326
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 94/168 (55%), Gaps = 18/168 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI-DGRL 141
W+P+ L DV P+ + + +Q +V+++D G ++ + D+CPHR A+LS G++ DGRL
Sbjct: 7 WHPVALVGDV-AQTPVAVQLLEQPVVVWRDAAGVVQAFADQCPHRGARLSLGRVTPDGRL 65
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
EC YHGWQF G+C ++P LP P + C R + +E+ G+VWV M L
Sbjct: 66 ECPYHGWQFAAGGRCTQVPALPTFVP-PPAHCARAFVAREAYGLVWVCMDGAG----TAL 120
Query: 202 PWF--ENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHD 243
P F E+ AR + ++ PYD + ++EN +D +H H+
Sbjct: 121 PVFAAEDDAR-----LRKLNCGPYDVAASAPRIIENFLDMSHFGFVHE 163
>gi|334118342|ref|ZP_08492432.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Microcoleus
vaginatus FGP-2]
gi|333460327|gb|EGK88937.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Microcoleus
vaginatus FGP-2]
Length = 356
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 87/169 (51%), Gaps = 5/169 (2%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
+ WY + T +V PL ++++ IVL++D G++ +DRCPHR KLS GQ+
Sbjct: 26 DRWYAIARTSEV-HTQPLAAKIWNRAIVLFRDSAGKINALEDRCPHRQVKLSHGQVKGDL 84
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+EC YHGW+ G+C ++ L + K+P +R+Y VKE G +W++ + +
Sbjct: 85 IECAYHGWRLNARGECAEVDYLAENQKLPNCK-IRSYPVKEQNGFIWLFPGDEMQAEKNN 143
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTA 249
L + + ++ + +S L+ENLMD H H DW A
Sbjct: 144 LLDLPEWEHLNYIATVSVIDCQAHYSFLIENLMDMYH---GHLHDDWQA 189
>gi|405373825|ref|ZP_11028484.1| iron-sulfur cluster-binding protein, Rieske family [Chondromyces
apiculatus DSM 436]
gi|397087339|gb|EJJ18389.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 332
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 3/210 (1%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLID 138
W WY + + +PLGL +++VL++D +G CPHR A L G++ +
Sbjct: 13 WATHWYAVAQASALGRSSPLGLQRLGRRLVLWRDADGVAHGADAACPHRGADLGLGRVRE 72
Query: 139 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
G LEC YHG++++G G C +P +AK ++ +R + V+E+ G +W W+ T
Sbjct: 73 GMLECPYHGFRYDGGGACRAMPCEGREAKPSKALSLRKHPVREAHGFIWAWLGGVTREPL 132
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
+LPW + PG S + ++E ++D H P +H R P
Sbjct: 133 PELPWLPSAPEPGPNSASVDDVWSARFTRVMEGMLDLHHFPFAHRRYV-PPGYTRLDPYE 191
Query: 259 FEVTERTDRGFAGRWGKEKDEPLPNFLRFE 288
+V + R W +++D P LRF+
Sbjct: 192 VQVESGSIRSVG--WLRKEDGPPGTGLRFD 219
>gi|126658476|ref|ZP_01729624.1| Rieske (2Fe-2S) region [Cyanothece sp. CCY0110]
gi|126620218|gb|EAZ90939.1| Rieske (2Fe-2S) region [Cyanothece sp. CCY0110]
Length = 344
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 10/174 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +V + P+ + ++ IVLY+D G++ +RCPHR KLSEG++++ LE
Sbjct: 13 WYVVAQSIEVTN-KPIEVRLWYHSIVLYRDSKGKIHGLDNRCPHRQVKLSEGKVVENSLE 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK-----TPPN 197
C YHGWQF+ +G C IP L + +P + Y VKE G +W+++ +
Sbjct: 72 CAYHGWQFDSKGVCTFIPYLLDNQVLPNCK-ISAYPVKECYGFIWIYLGSQQILGLQKIE 130
Query: 198 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKR 251
P ++P +E + + ++ + S L+ENLMD H + +D WT +
Sbjct: 131 PIRIPEWEQL---NYINTISVIDCQAHFSFLIENLMDMYHGHLHNDYQAWTEAK 181
>gi|56752068|ref|YP_172769.1| hypothetical protein syc2059_d [Synechococcus elongatus PCC 6301]
gi|56687027|dbj|BAD80249.1| unknown protein [Synechococcus elongatus PCC 6301]
Length = 233
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ L + V D PL +T+ + I LY+D G++ DRC HR A LS G + + L
Sbjct: 7 WYPVALAQKV-GDRPLSVTLCGEAIALYRDSAGQIHALSDRCVHRGAALSGGWVENDCLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQ++ +G C KIP +IP +A V Y+ E G+VW++ + LP
Sbjct: 66 CPYHGWQYDAQGHCRKIPANTEQQRIPFAAKVPHYDAIERYGLVWLFYGDLPEADRPPLP 125
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
+ P ++ V ++ + ENLMD AH P +H + A +P E
Sbjct: 126 PLPEYDDPAWRTVQGEVTYTTHYTRVTENLMDFAHAPFTHSGSFGAASDPLIEPYKVE 183
>gi|428770647|ref|YP_007162437.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Cyanobacterium aponinum PCC 10605]
gi|428684926|gb|AFZ54393.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanobacterium aponinum
PCC 10605]
Length = 350
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 95/168 (56%), Gaps = 7/168 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +V D P +T++ + IV++++ G+++ +DRCPHR KLS+G ++ +E
Sbjct: 20 WYVVARSVEVTD-KPYCVTLWHENIVIFRNAQGKIKALEDRCPHRQVKLSDGVVVGDDIE 78
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP--NPDK 200
C YHGW+F GEGKC +P L + ++P S ++ Y V+E G +W+++ P
Sbjct: 79 CAYHGWRFNGEGKCSFVPYLQENQRLP-SCKLKAYPVQELDGFIWLFLGDGDSEKIKPMG 137
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWT 248
LP +E+ V+TI+ P S L+ENLMD H + + W
Sbjct: 138 LPEWEHLNY--IASVTTIN-CPGHFSYLIENLMDMYHGHLHDNYQAWA 182
>gi|407711022|ref|YP_006794886.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
gi|407239705|gb|AFT89903.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
Length = 361
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 87/173 (50%), Gaps = 16/173 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L+ +V +APL T+ D+ +V Y+ G+ DRCPHR A LS G+L+DG LE
Sbjct: 8 WYVAALSSEVAANAPLARTLLDEPVVFYRTAGGQAVALADRCPHRFAPLSRGRLVDGALE 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPAD----AKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
C YHG +F +G+CV P + A P A R Y V+E G VW W P +P
Sbjct: 68 CPYHGLRFGADGRCVFNPHGNRNGNDTASPPARAQARHYPVRERYGAVWFW-----PGDP 122
Query: 199 DK-----LPWFENF-ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
++ LP F+ R F +H ++ + +NL+D +H H T
Sbjct: 123 ERAAHTPLPAFDYLDPRENFTTGRYLHTRA-NYQLSADNLLDLSHFQYLHPET 174
>gi|217421515|ref|ZP_03453019.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 576]
gi|217395257|gb|EEC35275.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 576]
Length = 332
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V D APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSDKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 188
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|170289317|ref|YP_001739555.1| Rieske (2Fe-2S) domain-containing protein [Thermotoga sp. RQ2]
gi|170176820|gb|ACB09872.1| Rieske (2Fe-2S) domain protein [Thermotoga sp. RQ2]
Length = 331
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 150/341 (43%), Gaps = 56/341 (16%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG-- 139
+WY + ++++ +G+T F +++ ++ NG++ C D C HR A +S G+++
Sbjct: 5 QWYVVLSSRELKKGQLIGVTRFGEKLAFWRGSNGKVHCISDICCHRGASISHGKVLSNGE 64
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 199
R+ C +HG++++ +G+ IP + +P + V++Y E +W+W + P P
Sbjct: 65 RVICPFHGFEYDSQGRVRTIPANGRNTPVPENFRVKSYPTYELADFIWIWYGDREPEKPP 124
Query: 200 KLPWFEN----FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKR---- 251
K +F++ F++V +H +S +EN +DP H+P H T R
Sbjct: 125 K--YFDDITDELVYTEFKEVWNVH-----YSRAIENQLDPIHLPFVHYNTIGRGNRTVVD 177
Query: 252 ------EDAQPLGFEVTERTDRGFAGRWGKEKDEPLPN--FLRFEAPCVLQNNRELVDSK 303
+D + F V R D G R +E D + +L F+ P + QN+
Sbjct: 178 GPIVEWKDDEMFYFYVFNRIDDGTPARKPEEMDPKRKSKVYLEFKFPNIWQNH------- 230
Query: 304 TGEKHYFTGLFLCRPTGQGKSMLIVRF--GATKRSPLAKL-------FPKWYFHQNASKV 354
EK T F P +M+ +RF G T L KL F K HQ+ V
Sbjct: 231 ISEKIRVTAAFT--PIDDDHTMIYLRFYVGLTGIKFLDKLIAVLGKPFNKIVLHQDKRVV 288
Query: 355 FEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRK 395
Q + ++E+ M E NL D + EYRK
Sbjct: 289 ETQ----IPKRSELRMGE---------NLIPGDAPILEYRK 316
>gi|254297531|ref|ZP_04964984.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 406e]
gi|386861637|ref|YP_006274586.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1026b]
gi|418539490|ref|ZP_13105086.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1026a]
gi|157807918|gb|EDO85088.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 406e]
gi|385346114|gb|EIF52807.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1026a]
gi|385658765|gb|AFI66188.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1026b]
Length = 332
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V D APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSDKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 188
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|389871176|ref|YP_006378595.1| vanillate O-demethylase oxygenase [Advenella kashmirensis WT001]
gi|388536425|gb|AFK61613.1| vanillate O-demethylase oxygenase [Advenella kashmirensis WT001]
Length = 363
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 16/206 (7%)
Query: 100 LTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 159
L + ++ +V Y+ +G++ +D CPHR LS G+LID +EC YHG F G+G C+
Sbjct: 23 LQLLNEYLVFYRQQDGQVVALEDACPHRKLPLSMGRLIDDAVECGYHGLTFNGQGTCIFA 82
Query: 160 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGF---QDVS 216
P AKIPR+A V+++ E G+VWVWM + +P + P + Q +
Sbjct: 83 P----GAKIPRAATVKSFATTEKYGLVWVWMGDADKADASLIPQIAEYGHPDWGINQGDA 138
Query: 217 TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRG-FAGRWGK 275
I E Y + + +NL+DP+H+ H R+ + +PL T TD G RW
Sbjct: 139 MIVECNYLY--MTDNLLDPSHVAWVH-RSSFGNSACVNEPL---TTTVTDSGVIVSRWMY 192
Query: 276 EKDEP--LPNFLRFEAPCVLQNNREL 299
+ + F++F C + + E+
Sbjct: 193 DTEVAPFYAKFVKFTGNCDRKQHYEV 218
>gi|397588210|gb|EJK54188.1| hypothetical protein THAOC_26247 [Thalassiosira oceanica]
Length = 855
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 129/277 (46%), Gaps = 26/277 (9%)
Query: 64 SAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDR 123
S EE ++ + + WY + V + ++ + +VLY+D +G L C +D
Sbjct: 377 SVEEGIQSQKFDSASFNDHWYAVAYPWQVKEGEVFATRLWGEPLVLYRDSDGNLVCSKDV 436
Query: 124 CPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKI-----PRSACVRTY 177
CPHR A LS G++ D G+LEC+YHGW F +G IP D P+ +C++TY
Sbjct: 437 CPHRSAPLSMGKINDEGQLECMYHGWGFGKDGNIESIPTQIRDGGSSKRSPPKRSCLKTY 496
Query: 178 EVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 237
V+E +G++W+W + + KLP + + + T+ + D ++EN +D H
Sbjct: 497 CVEEHEGLIWIWRGELLEADASKLPKTRDVST---YPIDTVLDYNVDWQYIVENNLDSPH 553
Query: 238 IPISHDRT-----DWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCV 292
+ H+ + RE + + R D G G +G+ P +RF++P +
Sbjct: 554 LFWLHNGSVPPVRSLNFVREKVNQVKLQYF-RDDSGH-GHYGQTAGGK-PKIVRFDSPNI 610
Query: 293 LQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVR 329
+++ G F+ F P G++ +++R
Sbjct: 611 VRH---------GGTSSFSEEFHIVPIAPGRTRVLLR 638
>gi|149921338|ref|ZP_01909792.1| vanillate O-demethylase oxygenase, putative [Plesiocystis pacifica
SIR-1]
gi|149817771|gb|EDM77235.1| vanillate O-demethylase oxygenase, putative [Plesiocystis pacifica
SIR-1]
Length = 360
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 97 PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 156
P T+ + ++L + G + +CPHR A LS G+ GR+ C YHGW F+ +G+C
Sbjct: 21 PFARTLLGRHVMLIRTREGVV-GLGAQCPHRHADLSTGEFGKGRIRCPYHGWSFDMQGRC 79
Query: 157 VKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVS 216
V++ P +++P++AC+ Y +E QG++WVW + P P + P FE +
Sbjct: 80 VEV---PGTSRVPKAACLPRYPARERQGMIWVWFGEGE-PTPSEPPSFEFSPSQRMRRQR 135
Query: 217 TIHEL-PYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTD-RGFAGRWG 274
T L + L+EN +DP HI +H RT ++ + L E+ +R+D GF GR G
Sbjct: 136 TPPRLWEVSYVDLVENTLDPTHITATHART-LGSRWAEHVGLMTEIEQRSDGGGFVGRAG 194
Query: 275 K 275
K
Sbjct: 195 K 195
>gi|415940797|ref|ZP_11555693.1| Rieske 2Fe-2S family protein [Herbaspirillum frisingense GSF30]
gi|407759115|gb|EKF68855.1| Rieske 2Fe-2S family protein [Herbaspirillum frisingense GSF30]
Length = 327
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 92/177 (51%), Gaps = 11/177 (6%)
Query: 95 DAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 154
D P T+ +++V++ +G QDRC HR A+LS+G + +G + C YHGW F GEG
Sbjct: 8 DGPQPFTLLGEKLVVWLREDGTPAALQDRCCHRTARLSKGFVENGNIVCGYHGWTFNGEG 67
Query: 155 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD 214
CV++PQ D +P ACV++Y KE G VWV + PD F PG++
Sbjct: 68 ACVRVPQ-SVDGSVPSGACVKSYHCKERYGYVWVALEDPLRDIPD----FPEDGAPGYRR 122
Query: 215 VSTIHELPYDHSIL--LENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGF 269
+ +E +D S L +EN D +H H T + +P +E+ E TD GF
Sbjct: 123 IFQFYER-WDTSALRMMENSFDNSHFSYVHRAT--FGLYDQPKPEKYEI-EETDYGF 175
>gi|427704113|ref|YP_007047335.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
gi|427347281|gb|AFY29994.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
Length = 338
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG 139
T+ WY + L+ V D PL +++VL +DG G + + RC HR L+ G
Sbjct: 9 TDCWYAVGLSSQV-GDQPLAHRFQGREVVLMRDGGGRVLAFDGRCAHRGCSLAAGWARGE 67
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMS-QKTPPNP 198
RL C YHGWQ++ G CV IP L A+ IPR A +RT+ +E G VW+W++ ++ P+
Sbjct: 68 RLVCPYHGWQYDALGTCVHIPALRAEESIPRQARLRTFPTRERHGFVWLWLAGRQASPDG 127
Query: 199 DKL--PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
D L P + D++ + + +I EN +DP H H
Sbjct: 128 DVLDIPELDGLTLRAGGDMAYTYATHFTRTI--ENGIDPTHAAFVH 171
>gi|412992548|emb|CCO18528.1| predicted protein [Bathycoccus prasinos]
Length = 655
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 24/192 (12%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSE 133
++ WT++WYP+ + + P +T+ +V++ D GE ++D+CPHRLA LSE
Sbjct: 64 GNFSWTKQWYPVAVADMIDPLKPHPVTLLGTDLVVWYDSVGEKWNVFEDKCPHRLAPLSE 123
Query: 134 GQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRS-----ACVRTYEVKESQGVVW 187
G++ DG L C YH W+F+GEGKC +PQ + R +C + E QG++W
Sbjct: 124 GRVEPDGSLLCAYHAWRFDGEGKCTAMPQANNQREEERIKGNPLSCASSRPTMEEQGLIW 183
Query: 188 VW---------------MSQKTPPNPDKLPWFENFARPG--FQDVSTIHELPYDHSILLE 230
W M P P+ ++ PG +++ + +LPY E
Sbjct: 184 CWGESSSGSDETVKTEAMMTPAPVIPEMKGVTKSGEAPGGAYRNHWQMRDLPYGWCAFFE 243
Query: 231 NLMDPAHIPISH 242
N +DPAH +SH
Sbjct: 244 NAIDPAHAVVSH 255
>gi|412985155|emb|CCO20180.1| predicted protein [Bathycoccus prasinos]
Length = 654
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 176/480 (36%), Gaps = 96/480 (20%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
++W + WYP + DAP + + ++V++K NG C +D CPHR A LS G
Sbjct: 154 FNWQKNWYPTSPVSFLETDAPNAIKILGLEMVVWKTKNG-WSCLEDSCPHRRAPLSLG-F 211
Query: 137 IDGR---LECLYHGWQFEGEGKCVKIP-----QLPADAKIPRSACVRTYEVKESQGVVWV 188
ID L C YHGW+F +GKCV IP A A + +C Y K GV+WV
Sbjct: 212 IDSNKDALVCRYHGWEFAKDGKCVDIPMSIDENANATACNSKKSCASEYPCKVHAGVLWV 271
Query: 189 WMSQKTPPNPD---KLPWFENFAR-PGFQDVS-TIHELPYDHSILLENLMDPAHIPISHD 243
W + K ENF+ G D + ELP ++ LEN DP+H H
Sbjct: 272 WPETGADAFLEASVKKCATENFSELQGAGDNEWGMVELPVGYNPALENQFDPSHAEWLHA 331
Query: 244 RTDWTAKREDAQPLG-------FE-VTERTDRGFAGRWG--KEKDEPLPNFLRFEAPCVL 293
R D + + FE + T GF R G + + F APC
Sbjct: 332 RYDAESNIRSVSEMADFVPMTKFESFDDDTTEGFKVRHGGYNAANSNIDATRVFTAPC-- 389
Query: 294 QNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRF---------GATKR--------- 335
+ E +D K K Y + L PT ++++ +F GA R
Sbjct: 390 SSRSEYLDDKG--KPYLSAHILYTPTEPNRTLMFTKFQAYQFTAVQGAGTRKVSVADKIE 447
Query: 336 ----SPLAKLFPKWYFHQN-------------------ASKVFEQDMGFLSSQNEVLMKE 372
+P+ LF + + N A + QD+ + + + K
Sbjct: 448 NLFTTPVRNLFNLYIQNFNTIGDARLIFTGLQHGAGNAAYTLGNQDIRAMHGVEKDMKKR 507
Query: 373 TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAG 432
+ Y +D V+ +R WMD G V
Sbjct: 508 GGKWNKAYYLPTVADKGVSAFRTWMDNFTEN------------------------GNVEW 543
Query: 433 VSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAIL 492
+ S A A T+ RY RH HC+ C + + + L + + L +++
Sbjct: 544 LDGS--AVDATPTVSEEEQTERYHRHTKHCRACKAALNELGILEERLLLASKVLLATSLI 601
>gi|444916129|ref|ZP_21236252.1| hypothetical protein D187_08534 [Cystobacter fuscus DSM 2262]
gi|444712629|gb|ELW53546.1| hypothetical protein D187_08534 [Cystobacter fuscus DSM 2262]
Length = 340
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 106/196 (54%), Gaps = 13/196 (6%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL-IDG 139
E W P+ ++++V PLGLT+ ++IVL++DG G L +D+CPHR KLS G++ DG
Sbjct: 16 EVWTPVAMSREV-RGKPLGLTLAGERIVLFRDGRGTLSALRDQCPHRGVKLSLGKVGADG 74
Query: 140 RLECLYHGWQFEGEGKCVKIP--QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN 197
LEC +HGW+F G C IP LP + + + V + V+E G++W++ ++
Sbjct: 75 CLECPFHGWRFSASGSCTHIPLNALPEEKR--QRYAVTAFPVRERGGLIWLY-TRPGGEA 131
Query: 198 PDKLPWFENFARPGFQDVSTIHELPYDH-SILLENLMDPAHIPISHDRTDWTAKREDAQP 256
PD+ E+ +PG V E H + +EN++D H+P H RT R +P
Sbjct: 132 PDEPYVPESLEKPGVH-VGFYAETWNAHWTRAMENMLDSPHLPFVHQRTIGRGLRRRMKP 190
Query: 257 ---LGFEVTERTDRGF 269
+ EV E T GF
Sbjct: 191 ESTMEVEV-EPTSTGF 205
>gi|124266194|ref|YP_001020198.1| vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
gi|124258969|gb|ABM93963.1| putative vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
Length = 349
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 18/232 (7%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG 139
T WY L+ +V A + D I++Y+ +G DRCPHR A L G+ I
Sbjct: 9 TNAWYVAALSTEVGAQALFHRKILDTSILIYRKQDGTAVALHDRCPHRFAPLHLGKRIGD 68
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 199
+ CLYH QF+ G+C K P + +IP++A VR++ ++E G +W+WM + P+
Sbjct: 69 EVACLYHALQFDCTGQCTKNPH--GNGQIPKAAKVRSFPLEERYGFLWIWMGEDA-PDLA 125
Query: 200 KLPWFENFAR-PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
+LP F + P T + ++ ++++N+MD +H I H + R PL
Sbjct: 126 RLPDFGELDKGPDTGVAFTYMHMKANYELIIDNVMDLSH--IDHVHGEIITTRGQLSPLV 183
Query: 259 FEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYF 310
++ E ++ + RW ++ + F F L + G +H+F
Sbjct: 184 PQMRE-GEQAISARWEWQQTPAMLIFANF-----------LPEPAAGARHFF 223
>gi|357126896|ref|XP_003565123.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like
[Brachypodium distachyon]
Length = 550
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 147/336 (43%), Gaps = 41/336 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++Q V+++ + C Q+ C HR L G + +GR+
Sbjct: 229 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDRRPGCVQNTCAHRACPLDLGSVNEGRIT 288
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW++ +GKC K+P + +R E +G+VW+W TP P
Sbjct: 289 CPYHGWEYSTDGKCEKMPSTKM-----LNVRIRALPCFEQEGMVWIWPGDDTP-----TP 338
Query: 203 WFENFARP-GFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRT---DWTAKREDAQPL 257
+ P GF + ELP +H +LL+NL+D AH P +H T W+
Sbjct: 339 TIPSLLPPSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP------- 391
Query: 258 GFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL-----VDSKTGEK--HYF 310
F G G W +P P + F PC++ + + ++ K+ ++ +
Sbjct: 392 SFVKFLTPTSGLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHL 446
Query: 311 TGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYF--HQNASKVFEQDMGFLSSQNEV 368
L +C P+ + K+ L+ R + +P K P + A KV +D+ + Q E
Sbjct: 447 HQLHICLPSSRNKTRLLYRM-SLDFAPWIKHIPFMHLLWSHFAEKVLNEDLRLVLGQQER 505
Query: 369 LMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGM 404
+ ++ S D YR W D V G+
Sbjct: 506 MNSGA----NVWNWPVSYDKLGIRYRLWRDAVERGV 537
>gi|423095040|ref|ZP_17082836.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
gi|397886387|gb|EJL02870.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
Length = 346
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 3/164 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++ +A LG T+ ++ +V ++D G ++ DRCPHR A L G+++ ++
Sbjct: 8 WYIAGWADELAQEALLGRTIVERPVVFFRDSQGVIQAIDDRCPHRFAPLHMGKVVGDSIQ 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F+G GKC P + IP++ACVR Y V E G +WVW+ + +P
Sbjct: 68 CPYHGLRFDGAGKCTHNPH--GEGTIPKAACVRGYPVVERHGAIWVWLGDPALASDALIP 125
Query: 203 WFENFAR-PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
F F + P + +L +N+MD +H+ H T
Sbjct: 126 DFSFFEQAPTHAKGKGYLPTRAHYELLSDNIMDLSHVDFLHPDT 169
>gi|323530310|ref|YP_004232462.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1001]
gi|323387312|gb|ADX59402.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1001]
Length = 361
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 86/178 (48%), Gaps = 26/178 (14%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L+ +V +APL T+ D+ +V Y+ G+ DRCPHR A LS G+L+DG LE
Sbjct: 8 WYVAALSSEVTANAPLARTLLDEPVVFYRTAGGQAVALADRCPHRFAPLSRGRLVDGALE 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPAD----AKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
C YHG +F +G+CV P + A P A R Y V+E G VW W P +P
Sbjct: 68 CPYHGLRFGADGRCVFNPHGNRNGNDTASPPARAQARHYPVRERYGAVWFW-----PGDP 122
Query: 199 DK-----LPWF------ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
++ LP F ENF + ++L D NL+D +H H T
Sbjct: 123 ERAAHTPLPAFHYLDPRENFTTGRYLHTRANYQLSAD------NLLDLSHFQYLHPET 174
>gi|312602310|ref|YP_004022155.1| vanillate demethylase oxygenase subunit [Burkholderia rhizoxinica
HKI 454]
gi|312169624|emb|CBW76636.1| Vanillate demethylase oxygenase subunit (EC 1.14.13.82)
[Burkholderia rhizoxinica HKI 454]
Length = 363
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 150/348 (43%), Gaps = 40/348 (11%)
Query: 71 ERQVADYD-WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLA 129
+R DY ++W+ + + DV D PL + + + +VL++D G + + D C HR A
Sbjct: 13 DRDALDYRALRDQWHVVARSDDVARDMPLAVRLLGEDLVLWRDHAG-INAWLDYCGHRGA 71
Query: 130 KLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW 189
+LS G + DG +EC YHGW++ G+C K+P P D P VR Y V E G+VWV
Sbjct: 72 RLSLGCVRDGEIECPYHGWRYASSGQCTKVPAHP-DQTPPAQRLVRVYRVTERYGLVWVC 130
Query: 190 MSQKTPPNPDKLPWFENFARPGFQDVS--TIHELPYDHSI----LLENLMDPAHIPISHD 243
+ Q P D P+ P + D S ++ PY + +EN +D +H P H
Sbjct: 131 VGQ---PASDVPPF------PEWDDASFRKVYAGPYRYRANALRSVENFLDASHFPFVHA 181
Query: 244 RTDWTAKREDAQPLGFEVT------ERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNR 297
+ D + +EV E ++ +G + P+ + A +
Sbjct: 182 NLNGDPNCPD-KIEDYEVKMTQNGLETSEIEVFQPYGDHRGIPVTARYTYHA---FRPTT 237
Query: 298 ELVDSKTGEKHYFTGLFLCRPTGQGKSM--LIVRFGATKRSPLAKLFPKWYFHQNASKVF 355
KTG F P + + + LIV + A++ Q +VF
Sbjct: 238 AYFSKKTGVTERFCTFLNATPVDEDECVIQLIVAINFGENLSDAQIL------QRQDRVF 291
Query: 356 EQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
EQD + SQ + + +E+++ SD EYR+W+ +G
Sbjct: 292 EQDRHIVESQRPYRLPLDL-REEMHVR---SDRLAVEYRRWLRALGEA 335
>gi|168702405|ref|ZP_02734682.1| iron-sulfur cluster-binding protein, Rieske family [Gemmata
obscuriglobus UQM 2246]
Length = 335
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 19/186 (10%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
+ W P+ L++ + D P+G+ V +Q + L++ GE+ D CPHR KLS G+++ R
Sbjct: 5 DHWQPVLLSRRLRRD-PVGVVVANQPVALFRTSGGEVAALSDVCPHRRLKLSVGKVVGDR 63
Query: 141 LECLYHGWQFE--GEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
L+C YHGW F+ G G+ P+L +AC +Y+ +E+ G+VW+ PP P
Sbjct: 64 LQCKYHGWTFDDCGNGESPAAPKL--------TACTASYDAREAHGLVWIKSRTSAPPFP 115
Query: 199 DKLPWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPL 257
D PGF + T+ H +P + ++N + H HD + R +
Sbjct: 116 D-------VTAPGFYPICTLEHTVPAPLELAVDNFNEIEHSATVHDTFGYDLDRLSEVKV 168
Query: 258 GFEVTE 263
FE T+
Sbjct: 169 AFESTD 174
>gi|5478807|dbj|BAA82484.1| chlorophyll b synthase [Arabidopsis thaliana]
Length = 536
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 178/388 (45%), Gaps = 45/388 (11%)
Query: 28 VIISLNKTPKSRKCHAVT-DRSSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPL 86
V+ L+K S AV DR T+T + GP + ++ WYP+
Sbjct: 174 VVTELDKPSSSTTASAVELDREKTNTGAKSLNVSGPVPPYSP----HLKNF-----WYPV 224
Query: 87 YLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYH 146
T D+ D + + F+Q V+++ +G+ C ++ C HR L G + +GR++C YH
Sbjct: 225 AFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYH 284
Query: 147 GWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFE 205
GW++ +G+C K+P KI C+ E +G++W+W + PP P LP +
Sbjct: 285 GWEYSTDGECKKMPSTKLLKVKIKSLPCL------EQEGMIWIWPGDE-PPAP-ILPSLQ 336
Query: 206 NFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTER 264
+ GF + +LP +H +LL+NL+D AH P +H T AK L +T
Sbjct: 337 PPS--GFLIHAELVMDLPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFLTPT 392
Query: 265 TDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL-----VDSKTGEK--HYFTGLFLCR 317
+ G G W +P P + F+ PC++ + + ++ K+ ++ +F L +C
Sbjct: 393 S--GLQGYW-----DPYPIDMEFKPPCIVLSTIGISKPGKLEGKSTQQCATHFHQLHVCL 445
Query: 318 PTGQGKSMLIVRFGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQNEVLMKETVP 375
P+ + K+ L+ R + +P+ K P + + A +V +D+ + Q E ++
Sbjct: 446 PSSKNKTRLLCRM-SLDFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQERMLNGA-- 502
Query: 376 TKELYLNLRSSDTWVAEYRKWMDKVGHG 403
++ + D YR W + V G
Sbjct: 503 --NIWNLPVAYDKLGVRYRLWRNAVDRG 528
>gi|254461027|ref|ZP_05074443.1| vanillate O-demethylase oxygenase subunit [Rhodobacterales
bacterium HTCC2083]
gi|206677616|gb|EDZ42103.1| vanillate O-demethylase oxygenase subunit [Rhodobacteraceae
bacterium HTCC2083]
Length = 355
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 11/207 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +KD +D +T+ +Q +V+++ +G++ +DRCPHRL LS+G+ I ++
Sbjct: 8 WYVAGWSKDFGEDL-RAITITEQNLVMFRSTDGQIVALEDRCPHRLLPLSKGKRIGDTVQ 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F +GKCV++ P +P SA V T+ V E+ G+VW+W + +
Sbjct: 67 CGYHGMTFGTDGKCVRV---PGQDNLPASAYVETFPVHEAHGIVWIWPGEAALAADTPVF 123
Query: 203 WFENFARPGF--QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
F+ P + +H L ++ + ENL+DPAH+ H T +A E+ +
Sbjct: 124 DLPEFSDPNWHAHHGDGLH-LNANYLNVAENLVDPAHVSFVHPTTLGSAASEN---VPVH 179
Query: 261 VTERTDRGFAGRWGKEKDEPLPNFLRF 287
V+ D+ A RW K+ P+ F F
Sbjct: 180 VSTSGDQIVAWRWIKDS-APVGFFQSF 205
>gi|119513069|ref|ZP_01632124.1| hypothetical protein N9414_17752 [Nodularia spumigena CCY9414]
gi|119462279|gb|EAW43261.1| hypothetical protein N9414_17752 [Nodularia spumigena CCY9414]
Length = 354
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + V P + + +Q+ VLY++ G++ +D+C HR A LS G L D +
Sbjct: 6 WYACEFSS-VVTKKPKQIVMLNQRFVLYRNSQGQVVALKDQCSHRGAALSMGWLEDNCIR 64
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+FE +GKCV+IP IP+ A + +Y ++E G +W++ + +P
Sbjct: 65 CPYHGWKFESDGKCVQIPSNEVGTPIPKKANITSYPIQEKYGFIWLFYGELPESERPPIP 124
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
F P + ++ +LEN +D +H+PI H T
Sbjct: 125 ALPEFDDPNLHRSFLDFSVNTHYTRVLENALDLSHLPIVHANT 167
>gi|299471141|emb|CBN78998.1| Rieske (2Fe-2S) region rieske 2Fe-2S domain protein, ISS putative
[Ectocarpus siliculosus]
Length = 487
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 149/357 (41%), Gaps = 55/357 (15%)
Query: 97 PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGK 155
PL + + +V++++ C+ DRCPHR A L+EG++ DG L C YH W+F+ +GK
Sbjct: 14 PLRGKLLGKDLVVWRNKEERWSCFDDRCPHRAAPLTEGRIEDDGSLLCAYHAWRFDADGK 73
Query: 156 CVKIPQLP---ADAKIPRSACVRTYEVKESQGVVWVW---------MSQKTP----PNPD 199
C+ IPQ D P+ AC + Y + +QG+VWVW S TP P+ D
Sbjct: 74 CLSIPQSDRGGKDEAQPK-ACAKVYPTQVAQGMVWVWGENGPDAGLESALTPAQLIPDLD 132
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
E+ R V ++L Y +EN++DP+H+ +SH + P+
Sbjct: 133 DKEGVES-GRVMLASVGQ-NDLAYGWDTFMENVVDPSHVTVSHHGIA-GDRYTGPSPIDL 189
Query: 260 EVTER----TDRGFAGRWGKEKDEPLP--NFLRFEAPCVLQNNRELVDSK---------- 303
+ + R T GF + +D+ LP + + F+ PC++ N + K
Sbjct: 190 KPSARWPVPTKDGFEFEF---RDDSLPADSTVTFQPPCLVINEAKDSAGKLLLIIYGTPT 246
Query: 304 -------TGEKHYFTGLFLCRPTGQGKSMLIVRFGATKR-----SPLAKLFPKWYFHQNA 351
G Y + ++ R G K + + P W H
Sbjct: 247 RPGWVRLLGRSAYVHTFAPNSKEAKVQAKEDKRNGVNKSRLQATANVVTKLPSWLQHVTG 306
Query: 352 SKVFEQDMGFLSSQNEVLMKETVPTK---ELYLNLRSSDTWVAEYRKWMDKVGHGMP 405
S QD+ FL Q ++L + + ++D V R+W+ K G G P
Sbjct: 307 SLFLHQDLVFLHYQEKILASAGCDSSNYGQAVFVPAAADRAVLALRQWITKHGSGGP 363
>gi|428219628|ref|YP_007104093.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Pseudanabaena sp. PCC 7367]
gi|427991410|gb|AFY71665.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena sp. PCC
7367]
Length = 391
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 12/185 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + L+ ++ + PL +T + + IV+Y+D G++ +D CPHR KLS G ++ LE
Sbjct: 63 WYVVALSSEL-QEKPLAVTFWGEAIVIYRDSKGQVHALEDTCPHRFVKLSHGCVVGDHLE 121
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW---MSQKTPPNPD 199
C YHGWQF +G C +P L + K+P ++ Y V++ G +W++ ++ P
Sbjct: 122 CAYHGWQFNDQGNCAVVPYLAENQKLPNCQ-IKRYAVQDLDGFIWLFPGDLALAEQVEPM 180
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
+P +++ V+TI + +S L+ENLMD H + + W + A L
Sbjct: 181 GVPEWDHLNY--IASVTTI-DTEAHYSYLIENLMDMYHGHLHDNYQAWAS----ASLLNI 233
Query: 260 EVTER 264
E ++R
Sbjct: 234 EASDR 238
>gi|21224238|ref|NP_630017.1| oxidase [Streptomyces coelicolor A3(2)]
gi|2815311|emb|CAA16434.1| putative oxidase [Streptomyces coelicolor A3(2)]
Length = 395
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 72/114 (63%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WYP+ ++V +D PLG+ Q +VL++D +G L C RCPH+ A L +G++ +
Sbjct: 5 QWYPIVEAQEVGNDKPLGVRRMGQDLVLWRDIDGNLVCQGARCPHKGANLGDGRMKGNTI 64
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 195
EC YHG+++ +G C IP + ++A+IP S V TY V+E G+VW+W + P
Sbjct: 65 ECPYHGFRYGADGACRVIPAMGSEARIPGSLRVPTYPVREQFGLVWMWWGDERP 118
>gi|126659883|ref|ZP_01731008.1| hypothetical protein CY0110_08486 [Cyanothece sp. CCY0110]
gi|126618846|gb|EAZ89590.1| hypothetical protein CY0110_08486 [Cyanothece sp. CCY0110]
Length = 460
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 150/352 (42%), Gaps = 30/352 (8%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+ W++ WYP+ + P +TV +++V++++ + D+CPH+LA+LS G++
Sbjct: 5 FSWSQNWYPISPLSYLDASVPTPVTVLGKKLVIWQNKKQQWVVMDDQCPHKLAQLSLGRI 64
Query: 137 -IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVVWVW 189
DG L C +HGW F EG C KIP L +A+ ++AC V Y + QG++WVW
Sbjct: 65 EDDGTLMCRHHGWCFNAEGNCTKIPMLEEEAR--KTACNSSRSQVTVYPTQVKQGLLWVW 122
Query: 190 MSQKTPPNPD-KLPWFENFARPGFQDVST---IHELPYDHSILLENLMDPAHIPISHDRT 245
KT D +L G +T + E+P + + +E+ DP+H H+
Sbjct: 123 PDDKTTAFEDCQLKEPAIIPECGLDVTATDWHLLEVPVGYIVSVESSFDPSHAQFLHEGL 182
Query: 246 DWTAKREDAQPLGFEVTER--TDRGFAGRWGKEK--DEPLPNFLRFEAPCVLQNNRELVD 301
A + F+ + GF + ++ + +F PC N +
Sbjct: 183 AGFAPEKAIPITSFKTVGEISAESGFTLKHSGYNIFNKDMEATRQFNPPCC---NTTIYR 239
Query: 302 SKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKR--------SPLAKLFPKWYFHQNASK 353
G F+ PT G+ I +F + L + + H + +
Sbjct: 240 YPNGNMMLAQLYFI--PTEPGRCRYISKFITSMNFSQNNFILDRLPQKLKTGFQHLSTYQ 297
Query: 354 VFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMP 405
+ +QD+ + +Q + P + Y +D + +R+W+D+ G P
Sbjct: 298 LSDQDLMVMHAQETLQASLEKPWHKSYFLPAKADIGIITFRQWLDQFAGGKP 349
>gi|254512627|ref|ZP_05124693.1| vanillate O-demethylase oxygenase subunit [Rhodobacteraceae
bacterium KLH11]
gi|221532626|gb|EEE35621.1| vanillate O-demethylase oxygenase subunit [Rhodobacteraceae
bacterium KLH11]
Length = 349
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 106/215 (49%), Gaps = 15/215 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +KD+ A T D+ IVLY+ +G +D CPHR LS+G L +E
Sbjct: 7 WYVAAWSKDI-GRALKAETFLDENIVLYRQEDGTPVALEDACPHRKLPLSKGNLKGDLVE 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F+ GKC+ P PR A VR+Y V + ++W+WM +PDK+
Sbjct: 66 CGYHGLTFDCSGKCIDSPT--QRGMTPRRAVVRSYPVVDRYRLLWIWMGDPELADPDKIF 123
Query: 203 WFENFARPGF--QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
ENF PG+ D + ++ + + +NL+DP+H+ H + + D +PL
Sbjct: 124 PIENFDNPGWGLTDGGAM-DIDCHYLWVCDNLLDPSHVAWVH-VSSFAGAGTDEEPLN-- 179
Query: 261 VTERTDRG-FAGRWGKEKDEPLPNFLR---FEAPC 291
E+TDRG RW + K P P + + F+ C
Sbjct: 180 -VEKTDRGAVVSRWIENK-PPSPYYAKLVAFDGDC 212
>gi|114765025|ref|ZP_01444172.1| Rieske (2Fe-2S) protein [Pelagibaca bermudensis HTCC2601]
gi|114542572|gb|EAU45597.1| Rieske (2Fe-2S) protein [Pelagibaca bermudensis HTCC2601]
Length = 356
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 136/326 (41%), Gaps = 61/326 (18%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + ++ DD T+ +V+++ +G + +DRCPHRL LS+G+ I ++
Sbjct: 9 WYVAGWSTEI-DDELRRFTILGDNVVMFRKSDGAVAALEDRCPHRLLPLSKGKRIGDTVQ 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F+ G CV++ P +P+SA V +Y + E G+VW+WM +P+K
Sbjct: 68 CGYHGLTFDCSGACVRV---PGQTNLPKSAYVISYPIVEKHGIVWIWMG-----DPEKAD 119
Query: 203 WFENFARPGFQDVS-------TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKRE--- 252
+ F P F D + +H L ++ + ENL+DPAH+ H T A E
Sbjct: 120 EAQVFDMPEFSDPAWAAHHGDALH-LKSNYLNVAENLVDPAHVSFVHPTTLGNAASENVP 178
Query: 253 -----------------DAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCV--- 292
DA+P+GF G RW ++ PC
Sbjct: 179 VHVQTEGEAIVAWRWIRDAEPIGFFKAFGGFSGNVDRW---------HYYYLYTPCTAVI 229
Query: 293 ----LQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSM---LIVRFGATKRSPLAKLFPKW 345
++ ++ + GE L P + ++ + +R AT + A+
Sbjct: 230 DFGSIETEKKCAEEDRGEGVRIFALHFMTPVTETYTIDRWMHLRNTATDDAEAAERMDTM 289
Query: 346 YFHQNASKVFEQDMGFLSSQNEVLMK 371
+ K F++D L + E M+
Sbjct: 290 F-----RKAFDEDKEILEAVQEEEMR 310
>gi|356509409|ref|XP_003523442.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 530
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 152/333 (45%), Gaps = 54/333 (16%)
Query: 62 PASAEERRGERQVADYDWTEE---------WYPLYLTKDVPDDAPLGLTVFDQQIVLYKD 112
P E+RR R+ D + WYP+ + D+ DD + + F++ V+++
Sbjct: 185 PVDIEKRRSPRKSLDISGPVQSYHPHLKNFWYPVAFSTDLKDDTMIPIECFEEPWVIFRG 244
Query: 113 GNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLP-ADAKIPRS 171
+G+ C Q+ C HR L G + +GR++C YHGW++ +GKC K+P + KI
Sbjct: 245 KDGKPGCVQNTCAHRACPLHLGSVNEGRIQCPYHGWEYTTDGKCEKMPSTRLLNVKIKSL 304
Query: 172 ACVRTYEVKESQGVVWVWMSQKTPPN--PDKLPWFENFARPGFQ-DVSTIHELPYDHSIL 228
C E++G++WVW P P LP GF+ + ELP +H +L
Sbjct: 305 PCF------ETEGMIWVWPGNDPPTATLPSLLP------PSGFEVHAEIVMELPIEHGLL 352
Query: 229 LENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFE 288
L+NL+D AH P +H T AK L +T + G G W +P P + F
Sbjct: 353 LDNLLDLAHAPFTHTST--FAKGWSVPSLVKFLTPAS--GLQGYW-----DPYPIDMEFR 403
Query: 289 APCVLQNNRELVDSKTGEKH---------YFTGLFLCRPTGQGKSMLIVRFGATKRSPLA 339
PC++ + + SK G+ + L +C P+ + K+ L+ R + +P+
Sbjct: 404 PPCMVLSTIGI--SKPGKLEGQSTSQCATHLHQLHVCLPSSKQKTRLLYRM-SLDFAPVL 460
Query: 340 KLFPKWYFHQN-----ASKVFEQDMGFLSSQNE 367
K P F Q+ A +V +D+ + Q E
Sbjct: 461 KHIP---FMQHLWRYFAEQVLNEDLRLVLGQQE 490
>gi|9944967|gb|AAG03051.1|AF284781_1 LLS1 protein [Oryza sativa Japonica Group]
Length = 540
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 151/337 (44%), Gaps = 44/337 (13%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++Q V+++ +G C + C HR L G + +GR++
Sbjct: 220 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQ 279
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 200
C YHGW++ +GKC K+P + +R+ E +G+VW+W P + P
Sbjct: 280 CPYHGWEYSTDGKCEKMPSTKM-----LNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSL 334
Query: 201 LPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 335 LP------PSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVK 386
Query: 260 EVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE---------KHYF 310
+T + G G W +P P + F PC++ + + SK G+ +
Sbjct: 387 FLTPSS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI--SKPGKLEGKSTKQCSTHL 437
Query: 311 TGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWY--FHQNASKVFEQDMG-FLSSQNE 367
L +C P+ + K+ L+ R + +P K P + + A KV +D+ L Q+
Sbjct: 438 HQLHICLPSSRNKTRLLYRM-SLDFAPWIKHVPFMHILWSHFAEKVLNEDLRVVLGQQDG 496
Query: 368 VLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGM 404
++ + + L YR W D + G+
Sbjct: 497 CQWRKCLELASIICKLG------IRYRLWRDAIERGV 527
>gi|347528238|ref|YP_004834985.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136919|dbj|BAK66528.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 359
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 3/161 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++ D PL T+ DQ+I+L++ G+G DRCPHR A LS G++I ++
Sbjct: 9 WYAAAFADEI-SDKPLARTLLDQEIMLFRKGDGTAAMLADRCPHRFAPLSGGKVIGDEIQ 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F +G+C P + + ++A + + V E G++W W P LP
Sbjct: 68 CPYHGLRFNAQGECTHNPHVKGGGAL-KAANITAWPVMEKYGILWFWPGNPDLAEPSALP 126
Query: 203 WFENFARP-GFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E RP F V + + ++ ++++NL+D +H H
Sbjct: 127 RVEFLERPDAFSVVKGLLHVKGNYELVVDNLLDLSHASYIH 167
>gi|320160752|ref|YP_004173976.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
gi|319994605|dbj|BAJ63376.1| putative oxidoreductase [Anaerolinea thermophila UNI-1]
Length = 327
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 136/300 (45%), Gaps = 33/300 (11%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WY + +++V P+G +++V ++ +G++ C DRCPH A LS G++++ L
Sbjct: 5 QWYVVLESREVRVGRPVGAVRMGEKMVFWRRKDGKVVCMADRCPHLGASLSRGKVVEDHL 64
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C +H ++F+ G CV IP L + P++ +++Y E+ G +W++ + P + L
Sbjct: 65 ACPFHAFEFDPGGACVYIPALGRNTPPPKAMRIKSYPTYEAHGFIWIYWGE---PQGELL 121
Query: 202 P--WF---ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT---------DW 247
P +F E F+ G++ + +H +S ++EN +D H+P H T D
Sbjct: 122 PPKFFDIDETFSYAGYRQLWPVH-----YSRMVENQLDVMHLPHVHTDTIGRGRKVVVDG 176
Query: 248 TAKREDAQPLGFEVTERTDRGFAGRWGKEKDEP-LPNFLRFEAPCVLQNNRELVDSKTGE 306
R + L V R D G R E P P FL F P + QN +
Sbjct: 177 PLARVEDGVLKVWVFNRKDDGTPPRRADELPTPSRPPFLEFIFPNLWQN-------RISS 229
Query: 307 KHYFTGLFLCRPTGQGKSMLIVR-FGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
+ F+ P + M +R + R P+ + W + + EQD +S+Q
Sbjct: 230 DYRIVVAFV--PVDEEHGMFYLRQYQRIVRIPILREIVNWIGVLGSHHIAEQDRRVVSTQ 287
>gi|310824238|ref|YP_003956596.1| rieske family iron-sulfur cluster-binding protein [Stigmatella
aurantiaca DW4/3-1]
gi|309397310|gb|ADO74769.1| Iron-sulfur cluster-binding protein, Rieske family [Stigmatella
aurantiaca DW4/3-1]
Length = 360
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 127/301 (42%), Gaps = 24/301 (7%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+ L + ++ PL T+ +VL++ G DRCPHR LS G++++G+L+
Sbjct: 26 WFILCASGEL-GGKPLMRTLQGTPLVLFRGDGGRPAALLDRCPHRNVPLSLGRVVEGQLQ 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 200
C YHGW+F+ G+C IP L + + ++ C +Y +E G VWV+ + P P +
Sbjct: 85 CGYHGWRFDAAGECRAIPGLTGETRA-KARCAASYATREQDGFVWVYSTPGVEPTSEPYR 143
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
P + PG+ V + P LEN +D H H TAK+ + +
Sbjct: 144 FPLLDA---PGYSSVRRVVRAPGSLHAALENTLDVPHTAFLHGGLFRTAKKSNEIEVVVR 200
Query: 261 ----------VTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYF 310
+ E +G GR + +F RF P + Q V+ + G++ +
Sbjct: 201 RGPDRVEAEYIGEPRPKGLVGRVLAPGGGVVQHFDRFLMPSIAQ-----VEYRIGQESHL 255
Query: 311 TGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLM 370
P +++ T R P+ K + A +F QD L Q + +
Sbjct: 256 MVSSAMTPVSDWDTLIYAV--VTFRLPIPHWLVKPFLTPVALHIFSQDSRILKQQTDSIH 313
Query: 371 K 371
+
Sbjct: 314 R 314
>gi|124266197|ref|YP_001020201.1| vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
gi|124258972|gb|ABM93966.1| putative vanillate O-demethylase oxygenase subunit A [Methylibium
petroleiphilum PM1]
Length = 353
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG 139
T WY L+ +V A + D I++Y+ +G DRCPHR A L G+ I
Sbjct: 13 TNAWYVAALSTEVGAQALFHRKILDTSILIYRKQDGTAVALHDRCPHRFAPLHLGKRIGD 72
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 199
+ CLYH QF+ G+C K P + +IP++A VR++ ++E G +W+WM + P+
Sbjct: 73 EVACLYHALQFDCTGQCTKNPH--GNGQIPKAAKVRSFPLEERYGFLWIWMGEDA-PDLA 129
Query: 200 KLPWFENFAR-PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
+LP F + P T + ++ ++++N+MD +H + H + R P
Sbjct: 130 RLPDFGELDKGPDTGVAFTYMHMKANYELIIDNVMDLSH--VDHVHGEIITTRGQLSPQI 187
Query: 259 FEVTERTDRGFAGRWGKEKDEPL 281
++ E T+ A RW ++ PL
Sbjct: 188 PKLREGTE-SVAARWEWQQTPPL 209
>gi|332531588|ref|ZP_08407485.1| Rieske (2Fe-2S) protein [Hylemonella gracilis ATCC 19624]
gi|332038951|gb|EGI75380.1| Rieske (2Fe-2S) protein [Hylemonella gracilis ATCC 19624]
Length = 362
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 5/183 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++++ D PLG V ++I Y+D G++ QD CPHR A LS G + DG+L
Sbjct: 12 WYVAASSQEIGADKPLGRMVCGERIAFYRDAAGKMVAVQDFCPHRGAPLSLGHVCDGQLT 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +GK V +P ++ ++++ V E G VWVW + + KLP
Sbjct: 72 CGYHGLVMGCDGKTVSMP----GQRVRGFPAIKSFPVAERYGFVWVWTGEAALADEAKLP 127
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
E F P + ++ + D+ ++++NLMD H H T K D P V
Sbjct: 128 VLEFFDHPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVHS-TSIGQKEIDETPCKTTVE 186
Query: 263 ERT 265
+ T
Sbjct: 187 DDT 189
>gi|300309801|ref|YP_003773893.1| phenylpropionate dioxygenase [Herbaspirillum seropedicae SmR1]
gi|300072586|gb|ADJ61985.1| phenylpropionate dioxygenase (Rieske 2Fe-2S family) protein
[Herbaspirillum seropedicae SmR1]
Length = 343
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 10/188 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L + P T+ +++V++ +G QDRC HR A+LS+G + +G +
Sbjct: 13 WYALMPIAQL-RQGPQPFTLLGEKLVVWLKEDGAPAALQDRCCHRTARLSKGFVENGNIV 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW F GEG CV++PQ AD +P ACV++Y KE G VWV + + P D +P
Sbjct: 72 CGYHGWTFNGEGACVRVPQ-NADGSVPAGACVKSYFCKERYGYVWVALEE---PLRD-IP 126
Query: 203 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
F PG++ + +E ++ ++EN D +H H T + +P +E+
Sbjct: 127 EFPEEGAPGYRRIFQFYERWETSALRMMENSFDNSHFSYVHRAT--FGLYDQPKPEKYEI 184
Query: 262 TERTDRGF 269
E TD GF
Sbjct: 185 AE-TDYGF 191
>gi|288961898|ref|YP_003452208.1| vanillate monooxygenase [Azospirillum sp. B510]
gi|288914178|dbj|BAI75664.1| vanillate monooxygenase [Azospirillum sp. B510]
Length = 357
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +V D PL T+ D+ +VL++D G R DRCPHR A LS G + L
Sbjct: 8 WYVAAWDHEVTADRPLARTLLDRPVVLFRDAAGTARALFDRCPHRFAPLSLGTVQGDSLR 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F+G G C + P + IP++A V + + E ++W+WM +P +P
Sbjct: 68 CAYHGLEFDGRGACTRNPH--GNGTIPKAAKVEAFPLVERHSLIWIWMGDPAKADPAAIP 125
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLE--NLMDPAHIPISHDRT 245
F P Q V + L + + +LE N+MD +HI H T
Sbjct: 126 DFGCL-DPESQHVGKRY-LRVNANYMLENDNIMDLSHIQFLHAST 168
>gi|302829817|ref|XP_002946475.1| hypothetical protein VOLCADRAFT_103059 [Volvox carteri f.
nagariensis]
gi|300268221|gb|EFJ52402.1| hypothetical protein VOLCADRAFT_103059 [Volvox carteri f.
nagariensis]
Length = 441
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 172/435 (39%), Gaps = 94/435 (21%)
Query: 109 LYKDGNGELRC-YQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPADA 166
+Y G RC Q LA LSEG++ DG L+C YHGWQF+G G C IPQL DA
Sbjct: 1 MYMKMRGVRRCPVQPAVTLGLAPLSEGRIESDGTLQCSYHGWQFDGRGACTHIPQLRGDA 60
Query: 167 KI------PRSACVRTYEVKESQGVVWVW--MSQKT------PPNPDKLPWFENFARP-- 210
K R +CVR + V+ G++WV SQ+ P P + E P
Sbjct: 61 KAMQVACESRRSCVRAFPVQVVHGLLWVRPDSSQQAHEEFAKNPAPPQTAIKELLGEPEV 120
Query: 211 -GFQDVST--IHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDR 267
GF+ + + ++P L EN++DP+H+P +H + E V E +
Sbjct: 121 EGFRQTTQWYMRDVPMRFDTLCENILDPSHVPFTHHKVQGNRNNEKGTTTKL-VDEISLE 179
Query: 268 GFA-------GRWGKEKDE-PLPNFLRFEAPCVLQNNRELVDSKTG-EKHYFTGLFLCRP 318
GFA R+G PNF+R+ P + N V ++ G + Y T + +CRP
Sbjct: 180 GFAFELDFQNPRFGVSVPAFKAPNFVRYGNP-IRSLNVFAVPTRPGWSRIYVTFMKVCRP 238
Query: 319 TGQGKSMLIVRFGATKRSP------LAKLFP-----KWYFH-QNASKVFEQDMGFLSSQN 366
G+++ + G R P + KL+ W H V + D L Q
Sbjct: 239 ---GRAITVGTQGEDTRQPGRLPWLVEKLYSMVEKITWLEHITQRHPVLDGDNYILHLQE 295
Query: 367 EVLMKE-TVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHA 425
L +E ++ + ++D R W + G +P
Sbjct: 296 RALHEEHNSDWQKNFFMPAAADASTIAIRTWFNTFGGAVP-------------------- 335
Query: 426 PAGLVAGVSASSPAKGAIGTMHAPNLA-----NRYFRHVIHCKGCSSVIKAFSTWKNSLS 480
P GT AP L +RY +H +HC+ C ++ ++
Sbjct: 336 ---------TCEP-----GTPVAPRLTKREALDRYSQHTVHCRHCQKALR-------NVD 374
Query: 481 VVAAALTVLAILASG 495
+ A +T IL +G
Sbjct: 375 LATAVVTAAGILVAG 389
>gi|424904520|ref|ZP_18328030.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
thailandensis MSMB43]
gi|390930498|gb|EIP87900.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
thailandensis MSMB43]
Length = 336
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D W PL L++ V APLG+ Q +VLY+D +G R +DRC HR A LS G++
Sbjct: 11 DSAARWLPLALSEQVSARAPLGVVCMGQPLVLYRDASGAARAMEDRCAHRRAPLSLGRVT 70
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 187
DGRL+C YHGW ++G G CV IP L +P VR YE E G VW
Sbjct: 71 PDGRLQCGYHGWIYDGASGACVAIPNLSQGEPVPPHYAVRAYETFERDGYVW 122
>gi|78061637|ref|YP_371545.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
gi|77969522|gb|ABB10901.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
Length = 351
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 150/348 (43%), Gaps = 44/348 (12%)
Query: 78 DW---TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
DW + W+P+ +V D PL +T+ D++IVL++ G G + +D CPHR A LS G
Sbjct: 27 DWEILSRYWHPVAFATEV-GDRPLAVTLLDERIVLFRSG-GAIVAARDVCPHRGAPLSRG 84
Query: 135 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
+++ RL C YHG ++ +GKCV+IP P D IP C+ TY +++ G+VWV +
Sbjct: 85 WVVEDRLVCPYHGLEYAADGKCVRIPSQP-DGPIPERLCLTTYAAQQAYGLVWVSLGGGE 143
Query: 195 PPNPDKLPWFENFARPGFQDVSTIHELPYDHSI------LLENLMDPAHIPISHDRTDWT 248
P PD W GFQ + LP I E +D AH H +
Sbjct: 144 LPLPDFPAWNAE----GFQQI-----LPPSIDIRASAGRQTEGFIDVAHFAWIHHES--F 192
Query: 249 AKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL-VDSKTGEK 307
A R + + V ER + G + P ++ AP R VD
Sbjct: 193 ADRRNPVVPQYSV-ERRENGLHAEYVSTVSN-FPKSMQHRAPEGFLWRRVFEVDVP---- 246
Query: 308 HYFTGLFLCRPTGQGKSMLIVRFGATKR-----SPLAKLF----PKWYFHQNASKVFEQD 358
+F L + P G ++L + R P+A+ F P ++ +VFE+D
Sbjct: 247 -FFARLTVHFPEGGRLAILNAASPVSARLTRLFVPIARNFDHDLPLDDVYEFNRQVFEED 305
Query: 359 MGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPY 406
+ Q E +P + +D YR+ + ++G G Y
Sbjct: 306 REIVEQQ----CPEDLPIDRSHEAPILADRSSGAYRRALGEIGLGQSY 349
>gi|359400756|ref|ZP_09193733.1| hypothetical protein NSU_3419 [Novosphingobium pentaromativorans
US6-1]
gi|357597795|gb|EHJ59536.1| hypothetical protein NSU_3419 [Novosphingobium pentaromativorans
US6-1]
Length = 332
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 91/175 (52%), Gaps = 11/175 (6%)
Query: 102 VFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQ 161
V + IVLY+ +G + C +DRC HRLA LS G+ + CLYHG++F +G CV+I
Sbjct: 18 VLGEPIVLYRAADGSIVCMEDRCCHRLAPLSLGERDGDAVRCLYHGFKFARDGACVEI-- 75
Query: 162 LPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHEL 221
P IPRSACV+TY E G +WVWM N D +P G+ + +
Sbjct: 76 -PGQKTIPRSACVQTYPATEKGGWIWVWMGDPARANLDLVPPAIGPGDEGWLTDQSHLDY 134
Query: 222 PYDHSILLENLMDPAHIPISHDRTDWTAKR--EDAQPLGFEVTERTDRGF-AGRW 273
D+ ++ +NL D +H+ H R + A D +P +VT R DRG RW
Sbjct: 135 DADYQLINDNLTDFSHLSYVH-RNSFGATEFFADTRP---KVT-RLDRGIRIQRW 184
>gi|427416553|ref|ZP_18906736.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 7375]
gi|425759266|gb|EKV00119.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 7375]
Length = 372
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 88/167 (52%), Gaps = 16/167 (9%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGE--------LRCYQDRCPHRLAKLSE 133
WY + + ++ D PLG+ ++ Q IVLY+D + +DRCPHR +LS
Sbjct: 35 HWYVVAQSSELTDQ-PLGVVLWHQPIVLYRDSASADSSVRTQVVHALEDRCPHRQVRLSH 93
Query: 134 GQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW---M 190
GQ+ +LEC+YHGWQF G CV++P L A K+P + +RTY VKE G +W++
Sbjct: 94 GQVQGNQLECVYHGWQFNDTGACVEVPYLSAKQKLP-NCRLRTYPVKEQDGFIWLFPGDA 152
Query: 191 SQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 237
Q P LP +++ + T + S L+ENLMD H
Sbjct: 153 DQADTLTPMGLPEWDHI---NYIASYTTIDTQSHFSFLIENLMDMYH 196
>gi|83716647|ref|YP_439697.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
thailandensis E264]
gi|167616266|ref|ZP_02384901.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
thailandensis Bt4]
gi|257142836|ref|ZP_05591098.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
thailandensis E264]
gi|83650472|gb|ABC34536.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
thailandensis E264]
Length = 355
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V AP+G+T +QIVL++D G + +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGITRLSEQIVLWRDREGNVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G G K+P + ++ + ACVR+Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQACVRSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ PG+ + ++ ++N+MDP H H
Sbjct: 144 LPDELVAPGYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH 183
>gi|356515896|ref|XP_003526633.1| PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Glycine
max]
Length = 530
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 151/333 (45%), Gaps = 54/333 (16%)
Query: 62 PASAEERRGERQVADYDWTEE---------WYPLYLTKDVPDDAPLGLTVFDQQIVLYKD 112
P E+RR R+ D + WYP+ + D+ DD + + F++ V+++
Sbjct: 185 PVDVEKRRPPRKSLDISGPVQSYHTHLKNFWYPVAFSTDLKDDTMIPIECFEEPWVIFRG 244
Query: 113 GNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLP-ADAKIPRS 171
+G+ C Q+ C HR L G + +GR++C YHGW++ +GKC K+P + KI
Sbjct: 245 KDGKPGCVQNTCAHRACPLHLGSVKEGRIQCPYHGWEYTTDGKCEKMPSTRLLNVKIKSL 304
Query: 172 ACVRTYEVKESQGVVWVWMSQKTPPN--PDKLPWFENFARPGFQ-DVSTIHELPYDHSIL 228
C E +G++WVW P P LP GF+ + ELP +H +L
Sbjct: 305 PCF------EKEGMIWVWPGNDPPTATLPSLLP------PSGFEVHAEIVMELPIEHGLL 352
Query: 229 LENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFE 288
L+NL+D AH P +H T AK L +T + G G W +P P + F
Sbjct: 353 LDNLLDLAHAPFTHTST--FAKGWSVPSLVKFLTPAS--GLQGYW-----DPYPIDMEFR 403
Query: 289 APCVLQNNRELVDSKTGEKH---------YFTGLFLCRPTGQGKSMLIVRFGATKRSPLA 339
PC++ + + SK G+ + L +C P+ + K+ L+ R + +P+
Sbjct: 404 PPCMVLSTIGI--SKPGKLEGQSTSQCATHLHQLHVCLPSSKQKTRLLYRM-SLDFAPVL 460
Query: 340 KLFPKWYFHQN-----ASKVFEQDMGFLSSQNE 367
K P F Q+ A +V +D+ + Q E
Sbjct: 461 KHIP---FMQHLWRYFAEQVLNEDLRLVLGQQE 490
>gi|307153793|ref|YP_003889177.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7822]
gi|306984021|gb|ADN15902.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 355
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 12/175 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +V P + ++ Q IVLY+D G + +DRCPHR KLS G + LE
Sbjct: 25 WYAVARSCEV-KRLPYSIILWHQAIVLYRDQKGIIHALEDRCPHRQVKLSHGSVSGNDLE 83
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW------MSQKTPP 196
C YHGW+F EGKC +P L K+P S +R+Y V E G +W++ + QK+
Sbjct: 84 CAYHGWRFNREGKCTFVPYLAEHQKLP-SCQIRSYPVLELDGFIWLFPGDEQALKQKS-L 141
Query: 197 NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKR 251
P +P +++ + ++ P +S L+ENLMD H + ++ W A +
Sbjct: 142 QPMGVPEWDHL---NYIATVSVINCPGHYSFLIENLMDMYHGHLHNNYQAWAAAK 193
>gi|423435967|ref|ZP_17412948.1| hypothetical protein IE9_02148 [Bacillus cereus BAG4X12-1]
gi|401123450|gb|EJQ31226.1| hypothetical protein IE9_02148 [Bacillus cereus BAG4X12-1]
Length = 315
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 28/224 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + KD+ P+ V + VLY+D GE++ CPHR A LS GQ+++G+L
Sbjct: 13 WYAVSYAKDI-KKIPVKKRVAGKDFVLYRDEKGEVQALSPYCPHRGADLSLGQVVNGKLV 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-MSQKTPPNPDKL 201
C YHGW+F+ G CV+IP P + IP+ A +Y VKE G++W++ S++TPP
Sbjct: 72 CPYHGWEFDSCGTCVRIPSQP-NKPIPKFAHTSSYPVKEKIGLIWIYPDSEETPPEWKTF 130
Query: 202 PWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
EN F F H + +E+++D AH+ H +T ++ A+ +
Sbjct: 131 HVMENTPFKLSFFHATWNAHL-----TRSIESVLDIAHLAYVHKKT--IGRKTKAESTNY 183
Query: 260 EVTERTDR------------GFAGRW----GKEKDEPLPNFLRF 287
++ D+ F +W GK+++E ++ F
Sbjct: 184 KLEGTLDQFIFSNGNAYLEYKFPHQWMLHSGKQENESFIQYITF 227
>gi|333915906|ref|YP_004489638.1| Vanillate monooxygenase [Delftia sp. Cs1-4]
gi|333746106|gb|AEF91283.1| Vanillate monooxygenase [Delftia sp. Cs1-4]
Length = 342
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 90/176 (51%), Gaps = 9/176 (5%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
+ WYPL +++V + ++ +VLY+ G + +D CPHRL LS G+L
Sbjct: 7 DTWYPLTWSRNVGRQLS-AHRIVERDVVLYRTEAGAVVAMEDACPHRLLPLSMGKLKGDA 65
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+EC YHG F+ G+C ++ P IP +A V TY VKE+ G+VW+WM P D
Sbjct: 66 IECGYHGLTFDCSGRCTRV---PGQDMIPGNAVVTTYPVKENMGLVWIWMGD--PSRADS 120
Query: 201 LPWFE--NFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRTDWTAKRED 253
+P F+ + P + V + ++ L +NL DPAH+ H T A ED
Sbjct: 121 VPVFDLPQYHDPAWSAVEGDALRIQANYLNLADNLCDPAHVSFVHLSTLGNAASED 176
>gi|53719245|ref|YP_108231.1| iron-sulfur protein, partial [Burkholderia pseudomallei K96243]
gi|52209659|emb|CAH35615.1| putative iron-sulphur protein [Burkholderia pseudomallei K96243]
Length = 321
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 188
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|114462397|gb|ABI75133.1| phenylpropionate dioxygenase [Dolichospermum circinale AWQC131C]
Length = 339
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 152/346 (43%), Gaps = 35/346 (10%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK--DGNGELRCYQDRCPHRLAKLS 132
AD +WY + +D + ++ ++VL++ + N ++ +QD CPHR LS
Sbjct: 4 ADQILINDWYVVAKVEDCKPGSITTASLLGVKLVLWRSHEQNSPIQVWQDHCPHRGVALS 63
Query: 133 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ 192
G++++ L C YHGW++ GKCV+IP P D P SA +TY +E G+VWV +
Sbjct: 64 MGEIVNNTLVCAYHGWRYNEAGKCVQIPAHP-DMIPPASAIAKTYHCQERYGLVWVCLG- 121
Query: 193 KTPPNP-DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAK 250
NP + +P F + P + T L + +++N +D +H P HD W
Sbjct: 122 ----NPVNDIPEFPEWDDPNYHKTYTKSYLIQASAFRVMDNSLDVSHFPFIHD--GWLGD 175
Query: 251 REDAQPLGFEVTERTDRGFAGRWGKE--------KDEPLPNFLRFEAPCVLQNNRELVDS 302
R + FEV D G++ + +D+ N+LR P + S
Sbjct: 176 RNYTKVENFEVKLDKDGLTMGKYQFQTSRIVSDIEDDSWVNWLRLSHPLC-----QYCVS 230
Query: 303 KTGEKHYFTGLFLCRPTGQGKSML--IVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMG 360
++ E L P + KS+L ++ + + L K + EQD+
Sbjct: 231 ESPEMR-IVDLMTITPIDEDKSILQMLITWKCLRMLDSKTLESK--LLTEYDETIEQDIR 287
Query: 361 FLSSQN----EVLMKETVPTKELYLNLRS-SDTWVAEYRKWMDKVG 401
L +Q +L + + T+ L + SD YR+W+ ++G
Sbjct: 288 ILHAQQPARLPLLPPKQINTQWLLQEIHVPSDKCTVAYRRWLKELG 333
>gi|167815593|ref|ZP_02447273.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 91]
Length = 135
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 188
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|187921686|ref|YP_001890718.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187720124|gb|ACD21347.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 364
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V DAP+G+T QIVL++D G++R +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-GDAPVGITRLGDQIVLWRDKEGQVRALEDRCPHRGARLSLGWNLGGSVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G+ K+P + ++ + CV++Y V+E G +++W + P L
Sbjct: 85 CWYHGIEIDGSGEVTKVPAV-SNCPLEGQKCVKSYPVEEHAGAIFLWFGDEAHKEPTPLV 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVGEEYASFLCMSHWKCNYQYAIDNVMDPMHGAYLH 183
>gi|167823999|ref|ZP_02455470.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 9]
Length = 128
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 187
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVW 121
>gi|237812428|ref|YP_002896879.1| Rieske (2Fe-2S) domain protein [Burkholderia pseudomallei MSHR346]
gi|254188948|ref|ZP_04895459.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pasteur 52237]
gi|157936627|gb|EDO92297.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pasteur 52237]
gi|237505159|gb|ACQ97477.1| Rieske (2Fe-2S) domain protein [Burkholderia pseudomallei MSHR346]
Length = 332
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 188
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|148557165|ref|YP_001264747.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148502355|gb|ABQ70609.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 351
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 81/160 (50%), Gaps = 6/160 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++V D APLG T+ +++V ++ +G L DRCPHR LS G + DG LE
Sbjct: 14 WYMFAWGEEVAD-APLGRTIAGEELVCFRGKDG-LVVLADRCPHRFVPLSLGSVADGVLE 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F +G+C+ P P A VR+Y V E V+WVW +PD +
Sbjct: 72 CAYHGLRFGSDGRCMFNPL----GDPPERAVVRSYPVVERDRVIWVWTGDPALADPDGIA 127
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
F A P V+ + D+ + ++NL D H+ H
Sbjct: 128 DFSFLADPARATVTGYAHVRADYQLAIDNLSDLTHVQFVH 167
>gi|187918962|ref|YP_001887993.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187717400|gb|ACD18623.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 352
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Query: 95 DAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 154
D PLG+T+ + +V+ + NGE+R RCPH+ L+ G+++DG++EC YHGWQF+G G
Sbjct: 38 DKPLGVTLLGESVVIAR-LNGEVRAMHGRCPHKGTALALGEVVDGKIECPYHGWQFDGGG 96
Query: 155 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ- 213
KCV++P + + + Y E G++WV + + P PD F + P F+
Sbjct: 97 KCVRVPAR-EELTEGMNVSIDCYYAAEHVGIIWVALEKPIAPLPD----FPELSDPSFRI 151
Query: 214 DVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
+E LEN +D AH P HD T
Sbjct: 152 QQGPSYEWATSAPRRLENFVDFAHFPYVHDGT 183
>gi|149921995|ref|ZP_01910437.1| iron-sulfur cluster-binding protein, Rieske family [Plesiocystis
pacifica SIR-1]
gi|149817160|gb|EDM76640.1| iron-sulfur cluster-binding protein, Rieske family [Plesiocystis
pacifica SIR-1]
Length = 368
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 9/177 (5%)
Query: 81 EEWYPLYLTKDVPDDA-----PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQ 135
E WYP+ + D+P PLG+ ++ VL++D G + C CPHR A L++G+
Sbjct: 23 EAWYPIAPSTDLPARGRRATKPLGIMRLGRRWVLWRDEAGAVACMPAACPHRGADLAQGR 82
Query: 136 LIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYE-VKESQGVVWVWMSQKT 194
+ G +EC YHG+++ G+CV +P A++P VR V+E+ G++W+W ++
Sbjct: 83 VRQGEIECPYHGFRWSAGGECVALPCEGRGARVPAKLHVRERPIVREAHGLIWMWYGERE 142
Query: 195 PPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD-WTAK 250
P +LPWFE G + + + +E + D H P +H D W K
Sbjct: 143 PTA--QLPWFERSPVEGRRTATHTEVWEVSFTRTMEAMQDLHHFPFAHHGLDPWRGK 197
>gi|167719395|ref|ZP_02402631.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei DM98]
Length = 127
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 187
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVW 121
>gi|254179664|ref|ZP_04886263.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1655]
gi|184210204|gb|EDU07247.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1655]
Length = 332
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 188
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|134277982|ref|ZP_01764697.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 305]
gi|134251632|gb|EBA51711.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 305]
Length = 332
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 188
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|116620794|ref|YP_822950.1| Rieske (2Fe-2S) domain-containing protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116223956|gb|ABJ82665.1| Rieske (2Fe-2S) domain protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 363
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 101/233 (43%), Gaps = 34/233 (14%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
+ WY + ++ LG + ++Q+ L++D G L CPHR A LS G L++G
Sbjct: 15 DAWYCAGWSHELRYPRILGRKLLNRQLALFRDQQGRLHALDAACPHRGADLSLGHLVEGH 74
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
++C HGW+F+ GKCV IP + KIP A TY V E QG++W+WM P P
Sbjct: 75 IQCPLHGWRFDDTGKCVCIPSQLPEVKIPPGAMASTYRVVERQGIIWIWMGAVRDPMP-- 132
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSI-----------LLENLMDPAHIPISHDRTDWTA 249
P QDV + H + +EN +D H+P H
Sbjct: 133 --------APPHQDVWEASPARHRHFLPPQLWRCSFFNAVENAIDNTHLPFLHAGL-LGP 183
Query: 250 KREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDS 302
++ P V + RGF G +D P E+P +R++ D
Sbjct: 184 NQQQLYPTQNLVVDEDLRGFRG-----EDSP-------ESPWGFPRSRQIFDG 224
>gi|346993484|ref|ZP_08861556.1| Rieske (2Fe-2S) protein [Ruegeria sp. TW15]
Length = 349
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 122/281 (43%), Gaps = 22/281 (7%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +KD+ + T + +VLY+ +G +D CPHR LS+G LI +E
Sbjct: 7 WYVAAWSKDIGRELK-AETYLGENVVLYRQQDGTPVALEDACPHRKLPLSKGNLIGDTVE 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F+ GKC P PR A V++Y V + ++W+WM NPD +
Sbjct: 66 CGYHGLTFDCSGKCTDSPT--QRGMTPRRAVVKSYPVVDRYRLLWIWMGDPELANPDLIF 123
Query: 203 WFENFARP--GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
ENF P G D + ++ + + +NL+DP+H+ H + + D +PL
Sbjct: 124 PIENFDNPTWGMTD-GGVMDIDCHYLWVCDNLLDPSHVAWVH-VSSFAGAGTDEEPLN-- 179
Query: 261 VTERTDRG-FAGRWGKEKDEPLPNF---LRFEAPCVLQNNRELVDSKTGEKHYF-----T 311
E+TDRG RW + K P P + + FE C + E+ G T
Sbjct: 180 -VEKTDRGVIVSRWIENK-PPSPYYSKLVAFEGECDRLQHYEMCLPAIGLNKSIYTPVGT 237
Query: 312 GLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNAS 352
G + P Q + F + F W+ H+N+
Sbjct: 238 GGYDIDPVEQTFINISYNFMTPINEDETRYF--WFQHRNSD 276
>gi|167738401|ref|ZP_02411175.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 14]
Length = 131
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 187
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVW 121
>gi|377822077|ref|YP_004978448.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. YI23]
gi|357936912|gb|AET90471.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp. YI23]
Length = 331
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 142/336 (42%), Gaps = 37/336 (11%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
EW P+ + DVPD G V D++IV+++D G ++D CPHR A+LS GQ++ ++
Sbjct: 12 EWLPVCNSDDVPDGGARGFIVADERIVVWRDSLGAAHVWRDYCPHRGAQLSLGQVMRDQI 71
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW+++ EG+C++IP P+ + + AC T+ +E GVVW+ + L
Sbjct: 72 VCPYHGWRYDIEGQCLRIPSNPS-LRPSKRACATTFVSEEKYGVVWMCFGEPA----HAL 126
Query: 202 PWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
+F A G + ++ + ++EN +D AH H + + +E
Sbjct: 127 DFFPEAAIAGGRRINLAPQTVKSSAPRVVENFLDMAHFSFVH--AGILGEEAHTEVPDYE 184
Query: 261 VTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVL--QNNRELVDSKTGEKHYFTGLFLCRP 318
V TD G R R+ P + Q ++D K L +
Sbjct: 185 VVS-TDDGLEARQ-----------CRYWQPAGIPGQGGGAMIDYVYRVKRPLIAT-LTKM 231
Query: 319 TGQGKSMLIVRFGATKRSPLAKLFPK-WYFHQNASKVFEQDMGFLSSQNEVLMKETVPTK 377
G G L + A SP+ + + W + D E+LM++T +
Sbjct: 232 AGGGLGALHIMLAA---SPVTQTETRAWLVSVHEDDAVHSDRELYDFNMEILMQDTPIVE 288
Query: 378 ELYLNL----------RSSDTWVAEYRKWMDKVGHG 403
+ L + +D YRKW+ +G G
Sbjct: 289 SQWPRLLPLALDAELHQRADRMAVAYRKWLAGMGFG 324
>gi|383788948|ref|YP_005473517.1| putative oxidoreductase [Caldisericum exile AZM16c01]
gi|381364585|dbj|BAL81414.1| putative oxidoreductase [Caldisericum exile AZM16c01]
Length = 322
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 157/338 (46%), Gaps = 54/338 (15%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WY + +K++ D P+GL F +++V+++ +G + C D+C HR A LS+G++++ +
Sbjct: 5 QWYIVLSSKELKD-KPIGLKRFGEKLVMWRTKDG-IACIADKCAHRGASLSKGKIVNNHI 62
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
+C +HG++++ G+ V IP +K+P + V++Y+VKE G ++++ ++ P ++
Sbjct: 63 QCPFHGFEYDSSGRVVLIPANGKASKVPDNFKVKSYKVKEKNGFIFLFYGDESKA-PGEI 121
Query: 202 PWFE----NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKRE----- 252
P+F+ +F + H +S +EN +DP H+P H T R
Sbjct: 122 PFFDWIDGSFTYDELNEPWNTH-----YSRCIENQLDPIHLPFVHHNTIGIGGRTVADGP 176
Query: 253 -----DAQPLGFEVTERTDRGFAGRWGKE-KDEPLPNFLRFEAPCVLQNNRELVDSKTGE 306
D++ + F V R D G + +E K + +L F P QN+ +
Sbjct: 177 VVEWFDSEKMRFYVFNRKDDGTPPKKPEELKGQKSKVYLEFIFPNFWQNH-------ISD 229
Query: 307 KHYFTGLFLCRPTGQGKSMLIVR---------FGATKRSPLAKLFPKWYFHQNASKVFEQ 357
K + F+ P + S++ VR F + L+ F + HQ+ V Q
Sbjct: 230 KFFIVAAFV--PVDEEHSLVYVRQYVKITGIKFIDKLIATLSIPFDRIVLHQDRRVVETQ 287
Query: 358 DMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRK 395
+ ++ + M E NL D + EYRK
Sbjct: 288 ----IPKKSALQMDE---------NLVQGDLPIIEYRK 312
>gi|443478861|ref|ZP_21068556.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena biceps
PCC 7429]
gi|443015788|gb|ELS30604.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena biceps
PCC 7429]
Length = 329
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 94/188 (50%), Gaps = 8/188 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + ++ P + Q+IVL+ D G+ DRC HR A LS G + G +
Sbjct: 13 WYPVIPMSLLAEEQPKSFQLLGQKIVLWIDAEGKPAAALDRCCHRSAHLSLGSVKQGAIA 72
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQ++ G C+ +PQLP D IP++ + T+ +E G VWV M +K+
Sbjct: 73 CAYHGWQYDRSGSCLHVPQLPTDTPIPKNYRIHTFACEERYGYVWVCMGDPI----NKIA 128
Query: 203 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
+ P F+ + +E+ + ++EN MD AH H T +A + P E+
Sbjct: 129 EIPEASDPQFRLIPEFYEVWNCAGLRVMENEMDLAHPTFVHTTTFGSA--DHPIPEELEI 186
Query: 262 TERTDRGF 269
TE TD G
Sbjct: 187 TE-TDYGL 193
>gi|167918794|ref|ZP_02505885.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei BCC215]
Length = 332
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 188
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|76809319|ref|YP_333639.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1710b]
gi|126438758|ref|YP_001059085.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 668]
gi|226197307|ref|ZP_03792884.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pakistan 9]
gi|254197515|ref|ZP_04903937.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei S13]
gi|254259439|ref|ZP_04950493.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1710a]
gi|418385122|ref|ZP_12967027.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 354a]
gi|418540796|ref|ZP_13106312.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1258a]
gi|418547038|ref|ZP_13112216.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1258b]
gi|418553254|ref|ZP_13118087.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 354e]
gi|76578772|gb|ABA48247.1| Rieske (2Fe-2S) domain protein [Burkholderia pseudomallei 1710b]
gi|126218251|gb|ABN81757.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 668]
gi|169654256|gb|EDS86949.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei S13]
gi|225930686|gb|EEH26696.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pakistan 9]
gi|254218128|gb|EET07512.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1710a]
gi|385360380|gb|EIF66313.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1258a]
gi|385362282|gb|EIF68106.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 1258b]
gi|385371926|gb|EIF77070.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 354e]
gi|385376682|gb|EIF81331.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei 354a]
Length = 332
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 188
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|167902512|ref|ZP_02489717.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei NCTC 13177]
Length = 134
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 187
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVW 121
>gi|67640966|ref|ZP_00439755.1| Rieske (2Fe-2S) domain protein [Burkholderia mallei GB8 horse 4]
gi|254178622|ref|ZP_04885277.1| conserved domain protein [Burkholderia mallei ATCC 10399]
gi|254199663|ref|ZP_04906029.1| conserved domain protein [Burkholderia mallei FMH]
gi|254205981|ref|ZP_04912333.1| conserved domain protein [Burkholderia mallei JHU]
gi|254358620|ref|ZP_04974893.1| conserved domain protein [Burkholderia mallei 2002721280]
gi|147749259|gb|EDK56333.1| conserved domain protein [Burkholderia mallei FMH]
gi|147753424|gb|EDK60489.1| conserved domain protein [Burkholderia mallei JHU]
gi|148027747|gb|EDK85768.1| conserved domain protein [Burkholderia mallei 2002721280]
gi|160699661|gb|EDP89631.1| conserved domain protein [Burkholderia mallei ATCC 10399]
gi|238521795|gb|EEP85244.1| Rieske (2Fe-2S) domain protein [Burkholderia mallei GB8 horse 4]
Length = 332
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 188
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|428210589|ref|YP_007083733.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoria acuminata PCC 6304]
gi|427998970|gb|AFY79813.1| ring-hydroxylating dioxygenase, large terminal subunit
[Oscillatoria acuminata PCC 6304]
Length = 340
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 129/300 (43%), Gaps = 21/300 (7%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + L++ + L T+ + + +++D GE+ +DRC HR ++LS G++ DG L
Sbjct: 7 WYVVALSEQLKPKQVLSRTILGEWLAIFRDEQGEVVALRDRCMHRNSRLSRGKVCDGTLH 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW ++ G+ V +P K S +Y +E G ++V +++ N D P
Sbjct: 67 CPYHGWVYDKSGQVVAVPAEGEQFKTLASRRTHSYPTQEKDGYIYVRLAENPSLNLDPFP 126
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH---------DRTDWTAKRED 253
+ +PG++ V I+ + + EN +D H H + + T +R
Sbjct: 127 -MPYYGKPGWETVRVINRFRNNVTNCAENFIDIPHTASVHPGVFRKSQQKQLEMTVERRH 185
Query: 254 AQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGL 313
E T+ G+ R+ + + + RF P V V+ GE F
Sbjct: 186 GSVFVTYRNETTNLGWYSRFLNPQGGEIYHTDRFSMPNVTS-----VEYNFGENRRFFIT 240
Query: 314 FLCRPTGQGKSMLI--VRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMK 371
P + +++ V F + +A+ F +W A + QD+ L Q EV+ K
Sbjct: 241 SQSIPEAEDSTLVYTDVTFNYGIWNKIARPFVRW----TAQYIINQDIEILGIQQEVIDK 296
>gi|126453309|ref|YP_001066370.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1106a]
gi|242317153|ref|ZP_04816169.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106b]
gi|403518798|ref|YP_006652931.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei BPC006]
gi|126226951|gb|ABN90491.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106a]
gi|242140392|gb|EES26794.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106b]
gi|403074440|gb|AFR16020.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei BPC006]
Length = 332
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 64/113 (56%), Gaps = 2/113 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 188
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVWA 122
>gi|47569539|ref|ZP_00240218.1| oxidase-related protein [Bacillus cereus G9241]
gi|47553795|gb|EAL12167.1| oxidase-related protein [Bacillus cereus G9241]
Length = 315
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 108/222 (48%), Gaps = 24/222 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +KD+ P+ V + VLY+D GE++ CPHR A LS GQ+++G+L
Sbjct: 13 WYAVSYSKDI-KKIPVKKRVAGKDFVLYRDQKGEVQALSPYCPHRGADLSLGQVVNGKLV 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-MSQKTPPNPDKL 201
C YHGW+F+ G CV+IP P + IP+ + +Y VKE G++W++ S++TPP
Sbjct: 72 CPYHGWEFDSCGTCVRIPSQP-NKPIPKFSHTFSYPVKEKIGLIWIYPDSEETPPEWQTF 130
Query: 202 PWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
EN F F H + +E+++D AH+ H +T + D+
Sbjct: 131 HVMENTPFKLSSFHATWNAHL-----TRSIESVLDIAHLAYVHKKTIGRKTKADSTNYKL 185
Query: 260 EVT----------ERTDRGFAGRW----GKEKDEPLPNFLRF 287
E T + F +W GK+++E ++ F
Sbjct: 186 EGTLDQFIFSNGDAYLEYKFPHQWMLHSGKQENESFIQYITF 227
>gi|167910762|ref|ZP_02497853.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 112]
Length = 133
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 187
+GRL+C YHGW ++G G CV IP L ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYVW 121
>gi|428310254|ref|YP_007121231.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428251866|gb|AFZ17825.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 383
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 12/199 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + + + ++ Q I +Y+D G++ +D CPH+ L +G++ L
Sbjct: 26 WYPVGWASQLKPGDIMPVVIWQQAIAVYRDETGQIHALEDACPHKGIALHKGKVQGCHLT 85
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F G G+CV IP LP K+PR A R+Y V+E ++W++ T +LP
Sbjct: 86 CAYHGWEFNGNGECVGIPYLPEGQKLPR-AQARSYPVQEKYNLIWLFPGDPTLAASQELP 144
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDW------TAKREDAQP 256
F P + + + SI EN MD H + + W + + DA
Sbjct: 145 HVPEFDHPDYLMIPLAAHMQSHFSICNENAMDVFHGFLHQNLQGWFNPVLKSLRETDA-- 202
Query: 257 LGFEVTERTDRGFAGRWGK 275
V D + GR K
Sbjct: 203 ---SVCAEYDVSYKGRMAK 218
>gi|295699780|ref|YP_003607673.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295438993|gb|ADG18162.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 354
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 100/208 (48%), Gaps = 25/208 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +V DDA T+ ++LY+ +G+L QDRC HR A LS G+ +
Sbjct: 7 WYVAAWSHEVTDDALFSRTIIGTPVLLYRTTDGQLVALQDRCCHRGAPLSVGRREGDCVR 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
CLYHG +F+ G CV+ P P +IP A VR+Y V E +W+WM +P +P
Sbjct: 67 CLYHGLKFDARGTCVEAPAQP---RIPPKATVRSYPVVERHRWIWIWMGDPMLADPATIP 123
Query: 203 ---WFENFA---RPGFQDVSTIHELPYDHSILL--ENLMDPAHIPISHDRT-DWTAKRED 253
W ++ A PG+ IH YD + LL +NL+D +H+P H T D
Sbjct: 124 DTHWLDDPAWRCLPGY-----IH---YDVNYLLICDNLLDFSHLPFVHPGTLGGPETYAD 175
Query: 254 AQPLGFEVTERTDRGF-AGRWGKEKDEP 280
+P ER D G RW + P
Sbjct: 176 VRP----TVERLDNGVRISRWTMDTQAP 199
>gi|385722324|gb|AFI73228.1| chlorophyllide a oxygenase [Hordeum vulgare]
gi|385722326|gb|AFI73229.1| chlorophyllide a oxygenase [Hordeum vulgare subsp. vulgare]
gi|385722328|gb|AFI73230.1| chlorophyllide a oxygenase [Hordeum vulgare]
Length = 550
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 147/336 (43%), Gaps = 41/336 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++Q V+++ + C Q+ C HR L G + +GR+
Sbjct: 229 WYPVAFSGDLKDDTMVPIDCFEEQWVIFRGKDKRPGCVQNTCAHRACPLDLGSVNEGRIT 288
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW++ +GKC K+P + +R E +G+VW+W TP P
Sbjct: 289 CPYHGWEYSTDGKCEKMPSTKM-----LNVRIRALPCFEQEGMVWIWPGDDTP-----TP 338
Query: 203 WFENFARP-GFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRT---DWTAKREDAQPL 257
+ P GF + ELP +H +LL+NL+D AH P +H T W+
Sbjct: 339 TIPSLLPPSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP------- 391
Query: 258 GFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL-----VDSKTGEK--HYF 310
F G G W +P P + F PC++ + + ++ K+ ++ +
Sbjct: 392 SFVKFLTPTSGLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCATHL 446
Query: 311 TGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWY--FHQNASKVFEQDMGFLSSQNEV 368
L +C P+ K+ L+ R + +P K P + + A KV +D+ + Q +
Sbjct: 447 HQLHVCLPSSTNKTRLLYRM-SLDFAPWMKHMPFMHLLWSHFAEKVLNEDLRLVLGQQDR 505
Query: 369 LMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGM 404
+ ++ S D YR W D V G+
Sbjct: 506 MNNGA----NVWNWPVSYDKLGIRYRLWRDAVERGV 537
>gi|428219240|ref|YP_007103705.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Pseudanabaena sp. PCC 7367]
gi|427991022|gb|AFY71277.1| Rieske (2Fe-2S) iron-sulfur domain protein [Pseudanabaena sp. PCC
7367]
Length = 360
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + + + P + F+Q+ +Y+ G++ +RC HR A L+ G + D L
Sbjct: 6 WYAVEFSDRI-SETPCLVKAFNQEFAVYRTAAGKVLAMDNRCVHRGAALANGTVNDNCLT 64
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMS----QKTPPNP 198
C YHGW+F+ GKCV IP PA IP A V TY+V E G +W++ + PP P
Sbjct: 65 CPYHGWKFDSSGKCVDIPANPAGMSIPNRAKVSTYDVVEKYGWIWLFWGDLPIDERPPIP 124
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ LP F N P + +S ++ ++EN +D AH P H
Sbjct: 125 E-LPHFYN---PDLKAISGDFNWSANYERIVENGLDIAHAPFVH 164
>gi|426405189|ref|YP_007024160.1| oxidase-like protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425861857|gb|AFY02893.1| oxidase-related protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 346
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 33/285 (11%)
Query: 102 VFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQ 161
+ + IV Y+D G++ +D CPHR LS G++++ ++EC YHGW+F+G G C +IP
Sbjct: 29 ILGEPIVFYRDSKGKVSAMRDICPHRGIPLSYGRVVNDQIECPYHGWKFDGTGMCTEIPS 88
Query: 162 LPADAKI-PRSACVRTYEVKESQGVVWVWMSQK--TPPNPDKLPWFENFARPGFQDVSTI 218
L D ++ P VR+Y V E+QG++WV++ K +P + F +++ +
Sbjct: 89 LCPDQELNPNKIKVRSYPVHEAQGLIWVFVGDKDYDVSKAPAIPVMKAFPADVKPNLTYV 148
Query: 219 HELP--YDHSILLENLMDPAHIPISHDRTDWTA------KREDAQPL--GFEVTE----R 264
P DH+++ LMDPAH P H W + K++ P+ GF++ +
Sbjct: 149 VNFPCHVDHAVI--GLMDPAHGPYVHKSWFWRSEKTMLEKKKKFAPVNYGFQMVRHQPSK 206
Query: 265 TDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKS 324
+ + G E + F PCV + E+ G +++++ L P + +
Sbjct: 207 NSKAYKILGGTPTTE-----ITFTLPCVRVEHIEV-----GPRNFYSYTALT-PVDENNT 255
Query: 325 MLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVL 369
+ + L L P HQ + K QDM ++ Q + L
Sbjct: 256 R-VTQLAYWDIPWLTLLKPA--IHQFSKKFLGQDMDAVTKQQDGL 297
>gi|297852214|ref|XP_002893988.1| hypothetical protein ARALYDRAFT_473812 [Arabidopsis lyrata subsp.
lyrata]
gi|297339830|gb|EFH70247.1| hypothetical protein ARALYDRAFT_473812 [Arabidopsis lyrata subsp.
lyrata]
Length = 536
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 156/334 (46%), Gaps = 39/334 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ T D+ D + + F+Q V+++ +G+ C ++ C HR L G + +GR++
Sbjct: 221 WYPVAFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQ 280
Query: 143 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW++ +G+C K+P KI C+ E +G++W+W + PP P L
Sbjct: 281 CPYHGWEYSTDGECKKMPSTKLLKVKIKSLPCL------EQEGMIWIWPGDE-PPAP-TL 332
Query: 202 PWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
P + + GF + +LP +H +LL+NL+D AH P +H T AK L
Sbjct: 333 PCLQPPS--GFLIHAELVMDLPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKF 388
Query: 261 VTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH---------YFT 311
+T + G G W +P P + F+ PC++ + + SK G+ +
Sbjct: 389 LTPSS--GLQGYW-----DPYPIDMEFKPPCIVLSTIGI--SKPGKLEGKSTKQCATHLH 439
Query: 312 GLFLCRPTGQGKSMLIVRFGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQNEVL 369
L +C P+ + K+ L+ R + +P+ K P + + A +V +D+ + Q E +
Sbjct: 440 QLHVCLPSSKNKTRLLYRM-SLDFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQERM 498
Query: 370 MKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
+ ++ + D YR W + V G
Sbjct: 499 LNGA----NIWNLPVAYDKLGVRYRLWRNAVDRG 528
>gi|126731895|ref|ZP_01747699.1| Rieske (2Fe-2S) protein [Sagittula stellata E-37]
gi|126707722|gb|EBA06784.1| Rieske (2Fe-2S) protein [Sagittula stellata E-37]
Length = 356
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 89/173 (51%), Gaps = 7/173 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + ++ DD T+ +V+Y+ +G + +DRCPHRL LS+G+ + ++
Sbjct: 9 WYVAAWSTEIDDDL-RRFTILGDHVVMYRKSDGGVVALEDRCPHRLLPLSKGKRVGDNVQ 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F+ G CV++ P +P+SA V + +E G+VW+WM + K+
Sbjct: 68 CGYHGLTFDCSGACVRV---PGQTNLPKSAYVEAFPTEERHGIVWIWMGDAARADTSKIF 124
Query: 203 WFENFARPGFQ--DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKRED 253
F PG++ +H L ++ + ENL+DPAH+ H T A E+
Sbjct: 125 DMPEFTDPGWKVHHGDALH-LRSNYLNVAENLVDPAHVSFVHPTTLGNAASEN 176
>gi|399076291|ref|ZP_10751944.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter sp. AP07]
gi|398037624|gb|EJL30809.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter sp. AP07]
Length = 361
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 93/174 (53%), Gaps = 12/174 (6%)
Query: 78 DW---TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
DW + W+P+ +V AP + D +V+++ NG L +DRCPHR +LS G
Sbjct: 24 DWDVLSRFWFPIAEVVEV-GAAPFKARLLDVDLVVFRGANG-LAVARDRCPHRHVRLSGG 81
Query: 135 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
Q+ DG++ C YH F+ G+C +IP + DA+IPR+ V T+ V+ G+VW +
Sbjct: 82 QVEDGQIICPYHALAFDETGQCTRIPAVGPDARIPRNYRVETFPVQVRYGLVWTCLV--- 138
Query: 195 PPNPDK-LPWFENFARPGFQDVSTI--HELPYDHSILLENLMDPAHIPISHDRT 245
P+PD+ LP F + +DV I + P + +EN D H+P+ H T
Sbjct: 139 -PDPDRDLPVFPDLVDSRPEDVVFIKTRDWPVSSARQVENFFDIGHLPVVHGAT 191
>gi|226502977|ref|NP_001142071.1| uncharacterized protein LOC100274228 [Zea mays]
gi|194706992|gb|ACF87580.1| unknown [Zea mays]
Length = 440
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 148/340 (43%), Gaps = 50/340 (14%)
Query: 83 WYPLYLTKDV-PDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
WYP+ + D+ D + + F++Q V+++ +G C Q+ C HR L G + +GR+
Sbjct: 116 WYPVAFSSDLKAPDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRI 175
Query: 142 ECLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--P 198
+C YHGW++ +GKC K+P D +I C E +G+VW+W P P
Sbjct: 176 QCPYHGWEYSTDGKCEKMPSTKMLDVRIQSLPCF------EQEGMVWIWPGDDPPKATIP 229
Query: 199 DKLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPL 257
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 230 SLLP------PSGFTVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSL 281
Query: 258 GFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH--------- 308
+T + G G W +P P + F PC++ + + SK G+
Sbjct: 282 VKFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI--SKPGKLQGKSTRQCST 332
Query: 309 YFTGLFLCRPTGQGKSMLIVRFGAT-----KRSPLAKLFPKWYFHQNASKVFEQDMGFLS 363
+ L +C P+ + K+ L+ R K PL L + A KV +D+ +
Sbjct: 333 HLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKHVPLMHLL----WSHFAEKVLNEDLRLVL 388
Query: 364 SQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
Q E ++ ++ S D YR W D V G
Sbjct: 389 GQQEGMIDGA----NVWNWPVSYDKLGIRYRLWRDAVERG 424
>gi|42524666|ref|NP_970046.1| oxidase-related protein [Bdellovibrio bacteriovorus HD100]
gi|39576876|emb|CAE78105.1| oxidase-related protein [Bdellovibrio bacteriovorus HD100]
Length = 346
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 33/285 (11%)
Query: 102 VFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQ 161
+ + IV Y+D G++ +D CPHR LS G++++ ++EC YHGW+F+G G C +IP
Sbjct: 29 ILGEPIVFYRDSKGKVSAMRDICPHRGIPLSYGRVVNDQIECPYHGWKFDGTGMCTEIPS 88
Query: 162 LPADAKI-PRSACVRTYEVKESQGVVWVWMSQK--TPPNPDKLPWFENFARPGFQDVSTI 218
L D ++ P VR+Y V E+QG++WV++ K +P + F +++ +
Sbjct: 89 LCPDQELNPNKIKVRSYPVHEAQGLIWVFVGDKDYDVSKAPAIPVMKAFPADVKPNLTYV 148
Query: 219 HELP--YDHSILLENLMDPAHIPISHDRTDWTA------KREDAQPL--GFEVTE----R 264
P DH+++ LMDPAH P H W + K++ P+ GF++ +
Sbjct: 149 VNFPCHVDHAVI--GLMDPAHGPYVHKSWFWRSEKTMLEKKKKFAPVNYGFQMVRHQPSK 206
Query: 265 TDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKS 324
+ + G E + F PCV + E+ G +++++ L P + +
Sbjct: 207 NSKAYKILGGTPTTE-----ITFTLPCVRVEHIEV-----GPRNFYSYTALT-PVDENNT 255
Query: 325 MLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVL 369
+ + L L P HQ + K QDM ++ Q + L
Sbjct: 256 R-VTQLAYWDIPWLTLLKPA--IHQFSKKFLGQDMDAVTKQQDGL 297
>gi|326500120|dbj|BAJ90895.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 550
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 146/337 (43%), Gaps = 43/337 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++Q V+++ + C Q+ C HR L G + +GR+
Sbjct: 229 WYPVAFSGDLKDDTMVPIDCFEEQWVIFRGKDKRPGCVQNTCAHRACPLDLGSVNEGRIT 288
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 200
C YHGW++ +GKC K+P + +R E +G+VW+W TP P
Sbjct: 289 CPYHGWEYSTDGKCEKMPSTKM-----LNVRIRALPCFEQEGMVWIWPGDDTPTPTIPSL 343
Query: 201 LPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRT---DWTAKREDAQP 256
LP GF + ELP +H +LL+NL+D AH P +H T W+
Sbjct: 344 LP------LSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTSTFAKGWSVP------ 391
Query: 257 LGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL-----VDSKTGEK--HY 309
F G G W +P P + F PC++ + + ++ K+ ++ +
Sbjct: 392 -SFVKFLTPTSGLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCATH 445
Query: 310 FTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYF--HQNASKVFEQDMGFLSSQNE 367
L +C P+ K+ L+ R + +P K P + A KV +D+ + Q +
Sbjct: 446 LHQLHVCLPSSTNKTRLLYRM-SLDFAPWMKHMPFMHLLWSHFAEKVLNEDLRLVLGQQD 504
Query: 368 VLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGM 404
+ ++ S D YR W D V G+
Sbjct: 505 RMNNGA----NVWNWPVSYDKLGIRYRLWRDAVERGV 537
>gi|83719903|ref|YP_442852.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
thailandensis E264]
gi|167621297|ref|ZP_02389928.1| Rieske [Burkholderia thailandensis Bt4]
gi|257139068|ref|ZP_05587330.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
thailandensis E264]
gi|83653728|gb|ABC37791.1| Rieske [2Fe-2S] domain protein [Burkholderia thailandensis E264]
Length = 326
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D W PL L++ V APL + Q IVL++D G R +DRC HR A LS G++
Sbjct: 10 DSAARWLPLALSEQVSGKAPLAVMCMGQPIVLFRDAAGAARAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 187
+GRL+C YHGW ++G G CV IP L D ++P R YE E G VW
Sbjct: 70 PEGRLQCGYHGWTYDGASGACVAIPNLSHDERVPAHYAARAYETFERDGYVW 121
>gi|416956292|ref|ZP_11935878.1| Rieske (2Fe-2S) protein [Burkholderia sp. TJI49]
gi|325522614|gb|EGD01145.1| Rieske (2Fe-2S) protein [Burkholderia sp. TJI49]
Length = 356
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V +AP+GLT +QIVL++D +G++ +DRCPHR A+LS G + G L
Sbjct: 26 WYPVAPSWQV-SNAPVGLTRLSEQIVLWRDQDGKVHALEDRCPHRGARLSLGWNLGGNLA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G K+P + A+ + + CV++Y V+E G +++W + P L
Sbjct: 85 CWYHGIEVDGSGTVNKVPAV-ANCPLEGTRCVKSYPVEEKAGAIFLWFGDEAHAEPAPLN 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVADEYAHFLCVSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|302834211|ref|XP_002948668.1| hypothetical protein VOLCADRAFT_89016 [Volvox carteri f.
nagariensis]
gi|300265859|gb|EFJ50048.1| hypothetical protein VOLCADRAFT_89016 [Volvox carteri f.
nagariensis]
Length = 308
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 49/203 (24%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL-IDG 139
W+PL + D P +T+ +V+++D G R ++DRCPHRLA LSEG++ DG
Sbjct: 22 RHWWPLIPVDYLKPDRPNPVTLLGITMVVWRDAGGRWRVFRDRCPHRLAPLSEGRVEPDG 81
Query: 140 RLECLYHGWQFEGEGKCVKIPQ-----LPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
L C YHGW+F+G G C +IPQ A A R +C Y + ++WVW
Sbjct: 82 SLSCAYHGWRFDGSGACRRIPQAVDAASEAAACSSRRSCATAYPARVEFNMLWVW----- 136
Query: 195 PPNPDKLP----------------------WFENFA-------------RPGFQDVSTIH 219
PD P F+ ++ +P +
Sbjct: 137 ---PDASPDAEAAAAATELVVSNDLRRRDKQFKEYSSSMESPRPSASSQKPPLPLAWYVR 193
Query: 220 ELPYDHSILLENLMDPAHIPISH 242
++PY + I +EN++DP+H+P SH
Sbjct: 194 QVPYSYEICMENVLDPSHLPYSH 216
>gi|398998322|ref|ZP_10701100.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM21]
gi|398120749|gb|EJM10402.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM21]
Length = 358
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 5/165 (3%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WY L ++ D P+G T+ ++ +VL++ NGE+ +DRC HR LS G L + +
Sbjct: 25 QWYVAALGWEL-KDKPVGRTLLNKPVVLFRKANGEVAALEDRCCHRALPLSNGTLEESGI 83
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-K 200
C YHG F+ GKCV+I P KIP A V Y V E +VW+W + P PD +
Sbjct: 84 RCGYHGLLFDERGKCVEI---PGQDKIPSKAKVPAYHVSEQDQIVWIWFGSEAQPEPDCE 140
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
P + + + ++ + ++ +NLMD +H+ H RT
Sbjct: 141 PPTYPVHSSGKYLFEGNVYHYNAPYQLIHDNLMDLSHLGYVHLRT 185
>gi|15219408|ref|NP_175088.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
gi|75264959|sp|Q9MBA1.1|CAO_ARATH RecName: Full=Chlorophyllide a oxygenase, chloroplastic;
Short=Chlorophyll a oxygenase; AltName: Full=Chlorophyll
b synthase; Short=AtCAO; Flags: Precursor
gi|13876511|gb|AAK43487.1|AC084807_12 chlorophyll a oxygenase [Arabidopsis thaliana]
gi|6855279|dbj|BAA90462.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|22135956|gb|AAM91560.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|25083487|gb|AAN72086.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|110737210|dbj|BAF00553.1| chlorophyll a oxygenase [Arabidopsis thaliana]
gi|332193913|gb|AEE32034.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
Length = 536
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 177/388 (45%), Gaps = 45/388 (11%)
Query: 28 VIISLNKTPKSRKCHAVT-DRSSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPL 86
V+ L+K S AV DR T+T + GP + ++ WYP+
Sbjct: 174 VVTELDKPSSSTTASAVELDREKTNTGAKSLNVSGPVPPYSP----HLKNF-----WYPV 224
Query: 87 YLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYH 146
T D+ D + + F+Q V+++ +G+ C ++ C HR L G + +GR++C YH
Sbjct: 225 AFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYH 284
Query: 147 GWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFE 205
GW++ +G+C K+P KI C+ E +G++W+W + PP P LP +
Sbjct: 285 GWEYSTDGECKKMPSTKLLKVKIKSLPCL------EQEGMIWIWPGDE-PPAP-ILPSLQ 336
Query: 206 NFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTER 264
+ GF + +LP +H +LL+NL+D AH P +H T AK L +T
Sbjct: 337 PPS--GFLIHAELVMDLPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFLTPT 392
Query: 265 TDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL-----VDSKTGEK--HYFTGLFLCR 317
+ G G W +P P + F+ PC++ + + ++ K+ ++ + L +C
Sbjct: 393 S--GLQGYW-----DPYPIDMEFKPPCIVLSTIGISKPGKLEGKSTQQCATHLHQLHVCL 445
Query: 318 PTGQGKSMLIVRFGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQNEVLMKETVP 375
P+ + K+ L+ R + +P+ K P + + A +V +D+ + Q E ++
Sbjct: 446 PSSKNKTRLLYRM-SLDFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQERMLNGA-- 502
Query: 376 TKELYLNLRSSDTWVAEYRKWMDKVGHG 403
++ + D YR W + V G
Sbjct: 503 --NIWNLPVAYDKLGVRYRLWRNAVDRG 528
>gi|5853117|gb|AAD54323.1| chlorophyll a oxygenase [Arabidopsis thaliana]
Length = 536
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 177/388 (45%), Gaps = 45/388 (11%)
Query: 28 VIISLNKTPKSRKCHAVT-DRSSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPL 86
V+ L+K S AV DR T+T + GP + ++ WYP+
Sbjct: 174 VVTELDKPSSSTTASAVELDREKTNTGAKSLNVSGPVPPYSP----HLKNF-----WYPV 224
Query: 87 YLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYH 146
T D+ D + + F+Q V+++ +G+ C ++ C HR L G + +GR++C YH
Sbjct: 225 AFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYH 284
Query: 147 GWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFE 205
GW++ +G+C K+P KI C+ E +G++W+W + PP P LP +
Sbjct: 285 GWEYSTDGECKKMPSTKLLKVKIKSLPCL------EQEGMIWIWPGDE-PPAP-ILPSLQ 336
Query: 206 NFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTER 264
+ GF + +LP +H +LL+NL+D AH P +H T AK L +T
Sbjct: 337 PPS--GFLIHAELVMDLPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFLTPT 392
Query: 265 TDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL-----VDSKTGEK--HYFTGLFLCR 317
+ G G W +P P + F+ PC++ + + ++ K+ ++ + L +C
Sbjct: 393 S--GLQGYW-----DPYPIDMEFKPPCIVLSTIGISKPGKLEGKSTQQCATHLHQLHVCL 445
Query: 318 PTGQGKSMLIVRFGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQNEVLMKETVP 375
P+ + K+ L+ R + +P+ K P + + A +V +D+ + Q E ++
Sbjct: 446 PSSKNKTRLLYRM-SLDFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQERMLNGA-- 502
Query: 376 TKELYLNLRSSDTWVAEYRKWMDKVGHG 403
++ + D YR W + V G
Sbjct: 503 --NIWNLPVAYDKLGVRYRLWRNAVDRG 528
>gi|339321988|ref|YP_004680882.1| ring-hydroxylating dioxygenase [Cupriavidus necator N-1]
gi|338168596|gb|AEI79650.1| ring-hydroxylating dioxygenase [Cupriavidus necator N-1]
Length = 353
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 5/184 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V AP+G+T Q IVL++DG G++ +DRCPHR A+LS G + R+
Sbjct: 21 WYPVAASWAV-SHAPIGITRLSQNIVLWRDGEGQVHALEDRCPHRGARLSMGWNLGDRVA 79
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP---NPD 199
C YHG + G+G+ +P + + + CVR+Y V+E G +++W + P +PD
Sbjct: 80 CWYHGVEVGGDGQVKSVPAVES-CPLEGRTCVRSYPVQEKAGAIFLWFGDQAPQGEGSPD 138
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
+L E + + ++ ++N+MDP H H + A E + +
Sbjct: 139 ELRLPEELVSEEHSNFLCVAHWDCNYRYAIDNVMDPMHGAYLHAVSHSMASGEKSAVMQV 198
Query: 260 EVTE 263
TE
Sbjct: 199 RETE 202
>gi|399078123|ref|ZP_10752723.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398034061|gb|EJL27338.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 336
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 11/210 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP ++ + P+ D +++Y+ G L DRCPHR A S G +++ ++
Sbjct: 8 WYPAGWVHEL-EKGPIARKFLDIPVMIYRLSTGVLAALHDRCPHRFAPFSYGTIVEDKVR 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C+YHG +F+ G+CV A P+ A VR++ V E VVW+WM ++ P + +P
Sbjct: 67 CIYHGLEFDSAGRCVGNALCFA---APKVAKVRSFPVFEQDNVVWIWMGEEEPADTSTIP 123
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
+ P ++ V + D+ +L +NLMD HI + H D +++ F+
Sbjct: 124 RYAYHNDPKYRCVYGNNYTKADYRLLCDNLMDLTHIVLLHPVFDALHRKQ-----SFKSW 178
Query: 263 ERTDRGFAGRWGKEKDEPLP--NFLRFEAP 290
E D A E E N +R+ AP
Sbjct: 179 EEGDDVLASYSAVEPHEEYHTINTIRWAAP 208
>gi|402814201|ref|ZP_10863795.1| putative phenylpropionate dioxygenase [Paenibacillus alvei DSM 29]
gi|402508048|gb|EJW18569.1| putative phenylpropionate dioxygenase [Paenibacillus alvei DSM 29]
Length = 325
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 17/176 (9%)
Query: 74 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSE 133
V D EW +DV + PL + + +++VL+++ G + ++D C HR A LS
Sbjct: 3 VNDAVLRNEWIVACRAQDV-QEKPLQVLIMGERVVLFRNEEG-VHAFKDLCVHRGAALSL 60
Query: 134 GQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK 193
G + DG+L C YH W+FEG G C +IPQLPA+ IP+ A TY +E G +WV +
Sbjct: 61 GCVKDGKLVCPYHAWEFEGSGACSRIPQLPAEQAIPKKAHAITYGCEERYGFIWVNLG-- 118
Query: 194 TPPNPDKLPW--FENFARPGFQDV----STIHELPYDHSILLENLMDPAHIPISHD 243
N D +PW FE F G+++V ++ P ++EN +D H+ + H+
Sbjct: 119 ---NAD-IPWFPFEEFGAEGWRNVIWGPQSVGAKP---PRIVENFLDVGHLAVVHE 167
>gi|116694681|ref|YP_728892.1| ring-hydroxylating dioxygenase [Ralstonia eutropha H16]
gi|113529180|emb|CAJ95527.1| Ring-hydroxylating dioxygenase [Ralstonia eutropha H16]
Length = 353
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 5/184 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V AP+G+T Q IVL++DG G++ +DRCPHR A+LS G + R+
Sbjct: 21 WYPVAASWAV-SHAPIGITRLSQNIVLWRDGEGQVHALEDRCPHRGARLSMGWNLGDRVA 79
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP---NPD 199
C YHG + G+G+ +P + + + CVR+Y V+E G +++W + P +PD
Sbjct: 80 CWYHGVEVGGDGQVKSVPAVES-CPLEGRTCVRSYPVQEKAGAIFLWFGDQAPQGEGSPD 138
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
+L E + + ++ ++N+MDP H H + A E + +
Sbjct: 139 ELRLPEELVSEEHSNFLCVAHWDCNYRYAIDNVMDPMHGAYLHAVSHSMASGEKSAVMQV 198
Query: 260 EVTE 263
TE
Sbjct: 199 RETE 202
>gi|220906615|ref|YP_002481926.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7425]
gi|219863226|gb|ACL43565.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7425]
Length = 364
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
Query: 97 PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 156
P + + D ++VLY++ +L +D+C HR A LS G + L C YHGW+FE G C
Sbjct: 32 PKAVKLMDHRVVLYRNAQEQLVALKDQCAHRGAALSAGWVEGNCLRCPYHGWKFESNGTC 91
Query: 157 VKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVS 216
++IP P IP+ A V TY V+E G +W+++ +P F F P + V
Sbjct: 92 MEIPANPPGVPIPKRARVDTYPVQEKYGFIWLFLGDLPEDERPPIPSFPQFDDPNLRCVF 151
Query: 217 TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
+ +++ ++EN MD +H H+R+ K + A+ +EV
Sbjct: 152 GEYTWNANYTRVIENTMDCSHTLFLHNRS--LGKSDKARIEDYEVV 195
>gi|312960145|ref|ZP_07774657.1| vanillate monooxygenase [Pseudomonas fluorescens WH6]
gi|311285639|gb|EFQ64208.1| vanillate monooxygenase [Pseudomonas fluorescens WH6]
Length = 357
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++ LG T+ +Q IV ++D +G ++ DRCPHR A L G+++ ++
Sbjct: 8 WYIAGWADELAQGGMLGRTIVEQPIVFFRDSHGVIQALADRCPHRFAPLHRGKVVGDSVQ 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F+G G+C P + IP++ACVR + E G +WVW + + +P
Sbjct: 68 CPYHGLRFDGSGQCTHNPH--GEGNIPKAACVRGFAAVERHGAIWVWPGDRHLASDALIP 125
Query: 203 WFENFAR-PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
F F + P + +L +N+MD +H+ H T
Sbjct: 126 DFSFFEQAPTHAKGHGYLPTRAHYELLSDNIMDLSHVDFLHPDT 169
>gi|414878608|tpg|DAA55739.1| TPA: hypothetical protein ZEAMMB73_990220 [Zea mays]
Length = 538
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 148/340 (43%), Gaps = 50/340 (14%)
Query: 83 WYPLYLTKDV-PDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
WYP+ + D+ D + + F++Q V+++ +G C Q+ C HR L G + +GR+
Sbjct: 214 WYPVAFSSDLKAPDTMVPIDCFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRI 273
Query: 142 ECLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--P 198
+C YHGW++ +GKC K+P D +I C E +G+VW+W P P
Sbjct: 274 QCPYHGWEYSTDGKCEKMPSTKMLDVRIQSLPCF------EQEGMVWIWPGDDPPKATIP 327
Query: 199 DKLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPL 257
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 328 SLLP------PSGFTVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSL 379
Query: 258 GFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH--------- 308
+T + G G W +P P + F PC++ + + SK G+
Sbjct: 380 VKFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI--SKPGKLQGKSTRQCST 430
Query: 309 YFTGLFLCRPTGQGKSMLIVRFGAT-----KRSPLAKLFPKWYFHQNASKVFEQDMGFLS 363
+ L +C P+ + K+ L+ R K PL L + A KV +D+ +
Sbjct: 431 HLHQLHVCLPSSRNKTRLLYRMSLDFAPWLKHVPLMHLL----WSHFAEKVLNEDLRLVL 486
Query: 364 SQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
Q E ++ ++ S D YR W D V G
Sbjct: 487 GQQEGMIDGA----NVWNWPVSYDKLGIRYRLWRDAVERG 522
>gi|91786893|ref|YP_547845.1| Rieske (2Fe-2S) domain-containing protein [Polaromonas sp. JS666]
gi|91696118|gb|ABE42947.1| Rieske (2Fe-2S) region [Polaromonas sp. JS666]
Length = 350
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
Query: 102 VFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQ 161
+ ++ +V Y+ +G QDRCPHR L G+++ +EC YHG F+ GKCVK P
Sbjct: 18 LLNEMVVFYRKEDGTAVALQDRCPHRFIPLHLGKIVGDSIECAYHGLTFDCSGKCVKNPH 77
Query: 162 LPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENF-ARPGFQDVSTIHE 220
D K+P +A VR+Y V E G++W+WM + +P +P + + GF
Sbjct: 78 --GDGKVPAAARVRSYPVAEKHGMLWIWMGSQA-ADPVTIPDYSVLESEAGFATSRGYLH 134
Query: 221 LPYDHSILLENLMDPAHIPISHD 243
+ ++ ++ ENL+D +HI HD
Sbjct: 135 IEANYELMGENLLDLSHITYLHD 157
>gi|384921320|ref|ZP_10021304.1| vanillate O-demethylase oxygenase, putative [Citreicella sp. 357]
gi|384464805|gb|EIE49366.1| vanillate O-demethylase oxygenase, putative [Citreicella sp. 357]
Length = 356
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 19/211 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + ++ DD T+ +V+++ +G + +DRCPHRL LS G+ + ++
Sbjct: 9 WYVAAWSTEI-DDELRRFTILGDHVVMFRKTDGTVAALEDRCPHRLLPLSRGKRVGDTVQ 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F+ G CV++ P +P+SA V + + E+ G+VW+WM T +P+ +
Sbjct: 68 CGYHGLTFDCSGACVRV---PGQTNLPKSARVDAFPIVENHGIVWIWMGDPTRADPETV- 123
Query: 203 WFENFARPGFQDVS-TIH-----ELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
F P F D + +H L + + ENL+DPAH+ H T A E+
Sbjct: 124 ----FDMPEFSDPNWAVHHGDALHLESHYLNVAENLVDPAHVSFVHPTTLGNAASEN--- 176
Query: 257 LGFEVTERTDRGFAGRWGKEKDEPLPNFLRF 287
+ V + A RW ++ EP+ F F
Sbjct: 177 VPVHVQTEGEAIVAWRWIRDG-EPIGFFKAF 206
>gi|398992730|ref|ZP_10695693.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM21]
gi|398136495|gb|EJM25581.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. GM21]
Length = 313
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 11/153 (7%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG 139
T W+ + L++ V D PL + +++VL+++ G+ +DRCPHR L+ G++++
Sbjct: 3 TPGWWAMALSEAVIDQTPLAVAFGGEELVLFRNAAGQAFALEDRCPHRRVPLALGRVVES 62
Query: 140 RLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP--- 195
L+C YHGW F+G G C +IP L A ++P R + V E+ G V VW+ + TP
Sbjct: 63 GLQCGYHGWTFDGANGACTQIPNLHAGERVPARYAARAFAVSEANGFVHVWLGEGTPQVE 122
Query: 196 -PNPDKLPWFENFARPGFQDVSTIHELPYDHSI 227
P+ D P F STI + +D +
Sbjct: 123 LPSSDYQPSGREFTG------STIVNMSHDQYL 149
>gi|393760646|ref|ZP_10349453.1| vanillate O-demethylase oxygenase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393161144|gb|EJC61211.1| vanillate O-demethylase oxygenase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 347
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 98 LGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCV 157
L + + + +VLY+ +G+ +D CPHR LS+G+LI ++EC YHG F+ G C
Sbjct: 21 LPVRMLSENLVLYRREDGQPVALEDSCPHRRLPLSKGRLIGDQVECGYHGLTFDCSGSCT 80
Query: 158 KIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVS 216
K P + A+IP+SA VR+Y E G+VWVWM +P KL + P + +
Sbjct: 81 KAPGV---AQIPKSAVVRSYPCAERYGLVWVWMGDPALADPSKLIDIPEWDNPEWGVNRG 137
Query: 217 TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP--LGFEVTERT-DRGF-AGR 272
EL ++ + +NL+DP+H+ W + P +G +T + D G R
Sbjct: 138 DAMELDCNYLYVTDNLLDPSHV-------SWVHQSSFGSPDIIGLPLTVKVEDNGVTVSR 190
Query: 273 WGKEKDEP--LPNFLRFEAPCVLQNNREL 299
W K + F++FE C + E+
Sbjct: 191 WSKNVEVAPFYKQFVKFEGNCDRKQQYEV 219
>gi|354725108|ref|ZP_09039323.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
mori LMG 25706]
Length = 340
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA K P CVR+Y V+E+ G +++W PD
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPDA 132
Query: 201 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + + A F + ++ LEN+MDP H H
Sbjct: 133 LTFQDELADTENFSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|413951240|gb|AFW83889.1| hypothetical protein ZEAMMB73_249573 [Zea mays]
Length = 487
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 125/259 (48%), Gaps = 32/259 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++Q V+++ +G C Q+ C HR L G + +GR++
Sbjct: 221 WYPVAFSSDLKDDTMVPIACFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQ 280
Query: 143 CLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 199
C YHGW++ +GKC K+P + +I C E +G+VW+W P P
Sbjct: 281 CPYHGWEYSTDGKCEKMPSTKMLNVRIQSLPCF------EQEGMVWIWPGDDPPKATIPS 334
Query: 200 KLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 335 LLP------PSGFTVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 386
Query: 259 FEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL-----VDSKTGEK--HYFT 311
+T + G G W +P P + F PC++ + + ++ K+ ++ +
Sbjct: 387 KFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLH 439
Query: 312 GLFLCRPTGQGKSMLIVRF 330
L +C P+ + K+ L+ R
Sbjct: 440 QLHVCLPSSRNKTRLLYRM 458
>gi|334125546|ref|ZP_08499535.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
hormaechei ATCC 49162]
gi|295097475|emb|CBK86565.1| Phenylpropionate dioxygenase and related ring-hydroxylating
dioxygenases, large terminal subunit [Enterobacter
cloacae subsp. cloacae NCTC 9394]
gi|333387009|gb|EGK58213.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
hormaechei ATCC 49162]
Length = 340
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA K P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + + A F + ++ LEN+MDP H H
Sbjct: 133 LTFPDELADTENFSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|338173749|gb|AEI83421.1| chlorophyllide a oxygenase [Camellia sinensis]
Length = 536
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 145/335 (43%), Gaps = 41/335 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++ V+++ +G+ C Q+ C HR L G + +GR++
Sbjct: 219 WYPVAFSTDLKDDTMVPIDCFEEPWVIFRGKDGKPGCVQNTCAHRACPLHLGPINEGRIQ 278
Query: 143 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW++ +GKC K+P +AKI C E +G++W+W P +
Sbjct: 279 CPYHGWEYSTDGKCKKMPSTRLVNAKIKALPCF------EQEGMIWIWPGNDAPTA--TI 330
Query: 202 PWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
P + PGF+ + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 331 PSLQ--PPPGFKIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLAKF 386
Query: 261 VTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVD-------SKTGEKHYFTGL 313
+T + G G W +P P + F PC++ + + + + FT
Sbjct: 387 LTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISSPGNWKDRALSSALRIFTNF 439
Query: 314 F-----LCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEV 368
L R G + K P + K++ A KV +D+ + Q +
Sbjct: 440 MYAYHHLDRRQGYCTECRWILLPMLKHVPFMQYLWKYF----AEKVLNEDLRIVIGQQDR 495
Query: 369 LMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
++ ++ S D YR W D V G
Sbjct: 496 MLNGA----NVWNLPVSYDKLGVRYRLWRDAVDQG 526
>gi|374366267|ref|ZP_09624348.1| oxidoreductase, rieske (2fe-2S) region [Cupriavidus basilensis
OR16]
gi|373102051|gb|EHP43091.1| oxidoreductase, rieske (2fe-2S) region [Cupriavidus basilensis
OR16]
Length = 353
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ V AP+G+T Q IVL++DG G++ +DRCPHR A+LS G + R+
Sbjct: 21 WYPVSAAWAVTH-APIGITRLGQNIVLWRDGEGQVHALEDRCPHRGARLSMGWNLGDRVA 79
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G+G+ +P + + + CVR+Y V+E G +++W ++ D L
Sbjct: 80 CWYHGVEVGGDGQVKSVPAVDS-CPLEGKTCVRSYPVQEKAGAIFLWFGERALAEADALR 138
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E D + ++ ++N+MDP H H
Sbjct: 139 LPEELESDEHTDFLCVAHWDCNYRYAIDNVMDPMHGAYLH 178
>gi|296104599|ref|YP_003614745.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295059058|gb|ADF63796.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 340
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA K P CVR+Y+V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCVRSYQVQEAHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + + A F + ++ LEN+MDP H H
Sbjct: 133 LTFPDELADTEHFSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|110289598|gb|AAP55073.2| chlorophyll a oxygenase, putative, expressed [Oryza sativa Japonica
Group]
Length = 527
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 123/260 (47%), Gaps = 34/260 (13%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++Q V+++ +G C + C HR L G + +GR++
Sbjct: 220 WYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHLGSVNEGRIQ 279
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 200
C YHGW++ +GKC K+P + +R+ E +G+VW+W P + P
Sbjct: 280 CPYHGWEYSTDGKCEKMPSTKM-----LNVRIRSLPCFEQEGMVWIWPGNDPPKSTIPSL 334
Query: 201 LPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 335 LP------PSGFTIHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVK 386
Query: 260 EVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE---------KHYF 310
+T + G G W +P P + F PC++ + + SK G+ +
Sbjct: 387 FLTPSS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI--SKPGKLEGKSTKQCSTHL 437
Query: 311 TGLFLCRPTGQGKSMLIVRF 330
L +C P+ + K+ L+ R
Sbjct: 438 HQLHICLPSSRNKTRLLYRM 457
>gi|295700273|ref|YP_003608166.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295439486|gb|ADG18655.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 352
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 33/323 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + + + TV D+ + LY+ +G L +D CPHRLA L+ G+ L
Sbjct: 8 WYMVGWSSEFSATDIVPFTVMDEPLALYRKDDGTLVALEDLCPHRLAPLTVGRKEGDELR 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C+YHG +F +G+C +I P +I CVR+Y ++E G WVWM + +P
Sbjct: 68 CMYHGLKFAADGRCTEI---PGQERISSKVCVRSYPIEEKHGAAWVWMGDPAKADVALIP 124
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT-------DWTAKREDAQ 255
E + V + + + ++ +NL+D +H P H+ T +++
Sbjct: 125 PIEGPDSDTYSMVCSKFVMNGNAELVADNLLDLSHAPFIHESTFGANNKVSLKVQKDGET 184
Query: 256 PLGFEVTER---TDRGFAGR-----WGKEKDEPLPNFLRFEAPCVLQNN-------RELV 300
G V ER DR GR + D+ + + +L+ N V
Sbjct: 185 RRGTTVLERGVVADRWHMGRPTNPYFDLPSDDNVVSTFLVPGVFILKINSFAPGVQHRFV 244
Query: 301 DSKTGEKHYF--TGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQD 358
D K E+ F + P +SM FG A L K + A F +D
Sbjct: 245 DGKPNEEPIFRRCTCQMITPINDTQSMFFYNFGPDHEH--ADL--KEHAFGIADAAFAED 300
Query: 359 MGFLSSQNEVLMKETVPTKELYL 381
+ +Q ++ K VP +++ +
Sbjct: 301 KAIIEAQQAMIKK--VPGRKMIM 321
>gi|213385128|dbj|BAG84256.1| putative oxygenase [Streptomyces griseoviridis]
Length = 381
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 74/118 (62%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WY + L+ DV + P + +V+++D G++ C Q RCPH+ A L++G+++ +
Sbjct: 5 QWYAILLSGDVKKNKPHKTRRMGENLVVWRDIEGKVVCQQARCPHKGANLADGRVMGNSV 64
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 199
EC YHG++F+ G+CV +P L +A+IP S V++Y V+E G++W+W + PD
Sbjct: 65 ECPYHGFRFDPSGQCVAVPCLGTEARIPPSMRVKSYPVREHLGLIWMWWGEDREVLPD 122
>gi|413951239|gb|AFW83888.1| hypothetical protein ZEAMMB73_249573 [Zea mays]
Length = 512
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 125/259 (48%), Gaps = 32/259 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ DD + + F++Q V+++ +G C Q+ C HR L G + +GR++
Sbjct: 221 WYPVAFSSDLKDDTMVPIACFEEQWVIFRGKDGRPGCVQNTCAHRACPLHLGSVNEGRIQ 280
Query: 143 CLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PD 199
C YHGW++ +GKC K+P + +I C E +G+VW+W P P
Sbjct: 281 CPYHGWEYSTDGKCEKMPSTKMLNVRIQSLPCF------EQEGMVWIWPGDDPPKATIPS 334
Query: 200 KLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
LP GF + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 335 LLP------PSGFTVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLV 386
Query: 259 FEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL-----VDSKTGEK--HYFT 311
+T + G G W +P P + F PC++ + + ++ K+ ++ +
Sbjct: 387 KFLTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTQQCSTHLH 439
Query: 312 GLFLCRPTGQGKSMLIVRF 330
L +C P+ + K+ L+ R
Sbjct: 440 QLHVCLPSSRNKTRLLYRM 458
>gi|421746659|ref|ZP_16184441.1| oxidoreductase, rieske (2fe-2S) region [Cupriavidus necator HPC(L)]
gi|409774804|gb|EKN56371.1| oxidoreductase, rieske (2fe-2S) region [Cupriavidus necator HPC(L)]
Length = 356
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 104/221 (47%), Gaps = 18/221 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V AP+G+T Q IVL++DG G++ +DRCPHR A+LS G + R+
Sbjct: 21 WYPVAASWSVTH-APIGITRLSQNIVLWRDGAGQVHALEDRCPHRGARLSMGWNLGDRVA 79
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP----PNP 198
C YHG + G+G+ +P + + + CVR+Y V+E G +++W ++ P +
Sbjct: 80 CWYHGVEVGGDGQVKSVPAVES-CPLEGKTCVRSYPVQEKAGAIFLWFGERAPLDGADST 138
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH---------DRTDWTA 249
D L E P + ++ ++N+MDP H H ++ A
Sbjct: 139 DALRLPEELENPEHSHFLCVAHWDCNYRYAIDNVMDPMHGAYLHAVSHSMASGEKQAVMA 198
Query: 250 KREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAP 290
RE L FE T + RG W E E +LR P
Sbjct: 199 VRETEHGLMFEKTGQ--RGVNFDW-VEFGETGTMWLRLAIP 236
>gi|374366506|ref|ZP_09624585.1| Rieske 2Fe-2S family protein [Cupriavidus basilensis OR16]
gi|373101976|gb|EHP43018.1| Rieske 2Fe-2S family protein [Cupriavidus basilensis OR16]
Length = 472
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLID-GRL 141
WY L + + DD P T+ + +VL++ +G+ QDRC HR A+LS+G + + G +
Sbjct: 6 WYAL-MPISMLDDGPKPFTLLGENLVLWRRADGKPAALQDRCCHRTARLSKGWVNERGDI 64
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW++ G CV+IPQ P D IP A V+ Y V+E G VWV + P PD
Sbjct: 65 VCGYHGWEYNCSGNCVRIPQAP-DNAIPSGAKVQAYHVQEKYGYVWVALDDPLQPIPD-- 121
Query: 202 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
F PG++ + +E S+ ++EN D +H H R ++ E +P ++
Sbjct: 122 --FPEDGDPGYRRIFQFYEKWNTSSLRVMENAFDNSHFSFVH-RANFGLS-EQPKPEKYD 177
Query: 261 VTERTDRGFAGRWGKEKDEPLP 282
+ +R WG E + +P
Sbjct: 178 LQQRE-------WGFEAETLVP 192
>gi|392980594|ref|YP_006479182.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
cloacae subsp. dissolvens SDM]
gi|392326527|gb|AFM61480.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
cloacae subsp. dissolvens SDM]
Length = 340
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA K P CVR+Y+V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCVRSYQVQEAHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + + A F + ++ LEN+MDP H H
Sbjct: 133 LSFPDELADTEHFSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|197106601|ref|YP_002131978.1| phenylpropionate dioxygenase [Phenylobacterium zucineum HLK1]
gi|196480021|gb|ACG79549.1| putative phenylpropionate dioxygenase [Phenylobacterium zucineum
HLK1]
Length = 362
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 103/206 (50%), Gaps = 27/206 (13%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI-D 138
T+ WY L+ D+ P + + ++L + +G+L +D CPHR A LS G+++ D
Sbjct: 21 TDIWYFAALSSDLKPGRPARYEILGEPVMLGRGPSGQLFALRDICPHRAAPLSAGRIVRD 80
Query: 139 GR---LECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQKT 194
G+ +EC YHGW+F +G C IP L AD + VR Y V ESQG+V+VW+ +
Sbjct: 81 GQGEAVECPYHGWKFGADGGCTAIPSLTADQAMDIGRIRVRRYPVAESQGLVFVWIGRDA 140
Query: 195 PPNPDKLPWFENFARPGFQDV---------STIHELPYDHSILLENLMDPAHIPISHDRT 245
PD+ P P F V + + DH+++ LMDPAH P H +
Sbjct: 141 ASEPDQPP-------PVFPGVVGGPPKLVDRMVFDAHIDHAVV--GLMDPAHGPYVHQQW 191
Query: 246 DW-TAKREDAQPLGFEVTERTDRGFA 270
W +AK + + FE E GFA
Sbjct: 192 WWRSAKSQHEKAKRFEPRE---AGFA 214
>gi|424776775|ref|ZP_18203751.1| vanillate O-demethylase oxygenase [Alcaligenes sp. HPC1271]
gi|422888068|gb|EKU30460.1| vanillate O-demethylase oxygenase [Alcaligenes sp. HPC1271]
Length = 347
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 103/204 (50%), Gaps = 11/204 (5%)
Query: 100 LTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 159
+ + + +VLY+ +G+ +D CPHR LS+G+LI ++EC YHG F+ G C K
Sbjct: 23 VRMLSENLVLYRREDGQPVALEDSCPHRRLPLSKGRLIGDQVECGYHGLTFDCSGSCTKA 82
Query: 160 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 218
P + A+IPRSA VR+Y E G+VWVWM +P KL + P + +
Sbjct: 83 PGV---AQIPRSAVVRSYPCTERFGLVWVWMGDPELADPSKLIDIPEWENPEWGVNRGDA 139
Query: 219 HELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGF-AGRWGKEK 277
EL ++ + +NL+DP+H+ H ++ + + PL +V D G RW K
Sbjct: 140 MELDCNYLYVTDNLLDPSHVSWVH-QSSFGSPDIIGLPLTVKV---EDNGVTVSRWSKNV 195
Query: 278 DEP--LPNFLRFEAPCVLQNNREL 299
+ F++FE C + E+
Sbjct: 196 EVAPFYKQFVKFEGNCDRKQQYEV 219
>gi|401765142|ref|YP_006580149.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
cloacae subsp. cloacae ENHKU01]
gi|400176676|gb|AFP71525.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
cloacae subsp. cloacae ENHKU01]
Length = 340
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA K P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + + A F + ++ LEN+MDP H H
Sbjct: 133 LTFPDELADTDSFSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|444913675|ref|ZP_21233824.1| hypothetical protein D187_05994 [Cystobacter fuscus DSM 2262]
gi|444715498|gb|ELW56364.1| hypothetical protein D187_05994 [Cystobacter fuscus DSM 2262]
Length = 341
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 123/301 (40%), Gaps = 24/301 (7%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+ L + ++ D PL + +VL++ G+ DRCPHR LS G+++ G+L+
Sbjct: 8 WFILCTSSEL-GDKPLARMLQGSPLVLFRTAEGKPAALADRCPHRNVPLSLGRVVKGQLQ 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 200
C YHGW+F+ G+C +P L + + +S C + +E +G VWV+ + P+ P +
Sbjct: 67 CGYHGWRFDSSGQCRAVPGLIGEPEA-KSRCATWHATREQEGFVWVYSTPGVEPSHEPYR 125
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD----------RTDWTAK 250
P + PG+ V LLEN +D H H D +
Sbjct: 126 FPLLDA---PGYSTVRRTLRAGGSLHALLENTLDVPHTSFLHGGLFRTEKQRHEIDVVVR 182
Query: 251 REDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYF 310
R Q + E G GR L +F RF P + Q V+ + G +
Sbjct: 183 RSAHQVEAEYIGEPRPEGLVGRLLAPGGGVLQHFDRFLMPSIAQ-----VEYRLGADSHL 237
Query: 311 TGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLM 370
P +++ T R PL K + A +F+QD L Q E +
Sbjct: 238 MVTSAMTPVDDWDTLVYAV--VTFRLPLPHWLIKPFITPVALHIFKQDARILERQTETIR 295
Query: 371 K 371
+
Sbjct: 296 R 296
>gi|419958593|ref|ZP_14474656.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
cloacae subsp. cloacae GS1]
gi|388606496|gb|EIM35703.1| Rieske family iron-sulfur cluster-binding protein [Enterobacter
cloacae subsp. cloacae GS1]
Length = 340
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA K P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + + A F + ++ LEN+MDP H H
Sbjct: 133 LTFPDELADTDSFSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|294083911|ref|YP_003550668.1| Rieske (2Fe-2S) protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663483|gb|ADE38584.1| Rieske (2Fe-2S) protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 347
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 109/234 (46%), Gaps = 30/234 (12%)
Query: 100 LTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 159
LT+ + +V+++ G +D CPHR LS G+L D R+EC YHG F+ G CV
Sbjct: 29 LTILGEHVVIFRTAKGVAVALEDACPHRKLPLSHGRLQDDRVECGYHGLTFDCSGHCV-- 86
Query: 160 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARP-------GF 212
P P V++Y V++ G++W+WM N D++ EN+ P G
Sbjct: 87 -HAPTQQNSPPDVSVKSYPVEDRYGLLWIWMGAPEAANTDEIFRIENYDNPAWGKTRGGS 145
Query: 213 QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGR 272
DV+ H L + +NL+DP+H+ H + A ED PL E E D R
Sbjct: 146 MDVAC-HYL-----YVTDNLLDPSHVAWVHVSSFAGAGTEDV-PLNVERLE--DGVLVSR 196
Query: 273 WGKEKDEPLPNF---LRFEAPCVLQNNREL-VDSKTGEKHYFTGLFLCRPTGQG 322
W +++ +P P + L FE C + + E V S K FT P G+G
Sbjct: 197 WMQDR-QPPPYYAPMLSFEGNCDRKQHYECRVPSIAINKSIFT------PVGKG 243
>gi|434384793|ref|YP_007095404.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428015783|gb|AFY91877.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 333
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ T D+ +P T+ Q+IVL+ D G+ +DRC HR A+LS G++++G +
Sbjct: 13 WYPVIPTADLLG-SPQPFTLLGQKIVLWLDAEGKPAAAKDRCCHRSAQLSLGKVVNGAIA 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQF+ G+CV +PQL D IP +A + TY E G WV + + P
Sbjct: 72 CPYHGWQFDSSGRCVCVPQL-KDVGIPAAARIETYRCTEKYGYAWVCLDEPIAEIPHIAE 130
Query: 203 WFENFAR--PGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
FE+ R P F + L ++EN +D AH H T + P E
Sbjct: 131 AFESDFRLIPEFYETWKCAGLR-----VMENELDLAHPTFVHTTT--FGSEDHPTPDRLE 183
Query: 261 VTE 263
+TE
Sbjct: 184 ITE 186
>gi|405351774|ref|ZP_11023192.1| Phenylpropionate dioxygenase [Chondromyces apiculatus DSM 436]
gi|397093075|gb|EJJ23807.1| Phenylpropionate dioxygenase [Myxococcus sp. (contaminant ex DSM
436)]
Length = 393
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 150/365 (41%), Gaps = 61/365 (16%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
+ WY L+ ++ PL T+F +VL++D G+ +DRC HR A+LS G + DGR
Sbjct: 34 DYWYVACLSTELRPGKPLARTLFGTGLVLFRDAQGQPTALRDRCLHRNARLSRGAVFDGR 93
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAK---IPRSACVRT--------------YEVKESQ 183
+ C YHGW ++ G V++P L + + AC R + E
Sbjct: 94 IGCPYHGWVYDASGAVVEVPSLGPSQRSELLNAEACAREGLKPEPCALGRVSRFPAVEQD 153
Query: 184 GVVWVWMSQKTPPN--PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPIS 241
G+V+V+M P P ++P ++ + G+ + P + L+EN MD H
Sbjct: 154 GLVFVYMGGDAPARAAPFRVP---HWGQDGWTVYFMVTRFPNGVTNLVENFMDVPHTLFV 210
Query: 242 H---------DRTDWTAKREDAQPL-GFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPC 291
H R T +R + L ++ + T G GR + PL + F P
Sbjct: 211 HPGWFRKPARKRVPATVRRAEGSVLVTYKQAQDTLTGL-GRLFNPRGLPLVHTDMFHVPN 269
Query: 292 VLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRF---------GATKRSPLAKLF 342
V + VD GE H F C P G S + GA L L
Sbjct: 270 VTR-----VDYLWGE-HGFVINSQCTPAGPTDSWVYTAISYRLPVDVPGALVGRALKPLV 323
Query: 343 PKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELY----LNLRSSDTWVAEYRKWMD 398
+WY Q V +QD+ + Q E L+ P +Y +L +D + YR+W+
Sbjct: 324 -RWYTRQ----VIQQDVDIMDIQREALLDG--PGGGVYSGTEADLHHAD--IEAYRRWLR 374
Query: 399 KVGHG 403
+ G G
Sbjct: 375 EGGQG 379
>gi|337745128|ref|YP_004639290.1| Rieske (2Fe-2S) domain-containing protein [Paenibacillus
mucilaginosus KNP414]
gi|336296317|gb|AEI39420.1| Rieske (2Fe-2S) domain protein [Paenibacillus mucilaginosus KNP414]
Length = 332
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 148/330 (44%), Gaps = 28/330 (8%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
EW+P+ + ++ +D PL +TV +++ +++ G + +D C HR A LS+G + L
Sbjct: 15 EWHPVCIAGEL-NDKPLSVTVLGERVAVFRTKRG-VHALRDLCVHRGAMLSKGWVEGETL 72
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW++EG G CV IP + KIP A Y E G+VWV + + + P PD
Sbjct: 73 VCPYHGWKYEGNGACVCIPAQSKEDKIPARARAEQYRCMEKYGLVWVCIGEPSAPLPD-- 130
Query: 202 PWFENFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
FE F PG++ + +++ + ++EN D AH+ H + A+ F+
Sbjct: 131 --FEEFENPGYRPLPCGPYQVKAAGTRVIENFTDFAHLMFVHG--GLLGHPDYAELPDFK 186
Query: 261 VTERTDRGFAG---------RWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFT 311
V + DR + G G E E E L D+ TG+ +
Sbjct: 187 VYKEKDRVYTGDVPIFQPVAHSGSEAKEGTTYVYVKEVFRPLAARLSKRDAATGQTLWI- 245
Query: 312 GLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMK 371
L P + + + + A R+ + + F + + VFEQD + +Q L+
Sbjct: 246 -LLTVLPVTEKECTV---YMAVSRNYGFDVDDR-QFIEFQNTVFEQDAWIIETQKPELLP 300
Query: 372 ETVPTKELYLNLRSSDTWVAEYRKWMDKVG 401
+ + LN +D YR+W+ ++G
Sbjct: 301 LDLQAE---LN-HKADVLSVAYRRWLIELG 326
>gi|307155301|ref|YP_003890685.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7822]
gi|306985529|gb|ADN17410.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanothece sp. PCC
7822]
Length = 337
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 7/188 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ ++ + + V+ Q I +Y+D G+L ++ CPH+ L +G++ + L
Sbjct: 26 WYPVAWAYNLKPTQIIPVVVWQQAIAVYRDSKGQLHALENACPHKGVVLDKGEVRENILV 85
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F EG+C+KIP LP + K+P A R+Y V+E G++WV+ + LP
Sbjct: 86 CPYHGWEFNPEGECIKIPYLPPEQKLP-CAKARSYPVQEKYGIIWVFPGDASLATQQSLP 144
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
+ P + V SI EN MD H + + W P+ ++
Sbjct: 145 DLPEYNDPDWIIVEIPAHFKAHFSICNENTMDVFHGFLHRNLQGW------FDPILLKLR 198
Query: 263 ERTDRGFA 270
++ D +A
Sbjct: 199 QQEDSVYA 206
>gi|167913596|ref|ZP_02500687.1| Rieske [Burkholderia pseudomallei 112]
Length = 330
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 3/135 (2%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+D W P+ L++ V A L + +Q +VL++D +G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 137 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W ++
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWA-CARDA 127
Query: 195 PPNPDKLPWFENFAR 209
PP + +P AR
Sbjct: 128 PPPAEAIPRAPRSAR 142
>gi|206971423|ref|ZP_03232373.1| 2Fe-2S domain protein [Bacillus cereus AH1134]
gi|229178848|ref|ZP_04306208.1| hypothetical protein bcere0005_22040 [Bacillus cereus 172560W]
gi|365160845|ref|ZP_09357002.1| hypothetical protein HMPREF1014_02465 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423413757|ref|ZP_17390877.1| hypothetical protein IE1_03061 [Bacillus cereus BAG3O-2]
gi|423430459|ref|ZP_17407463.1| hypothetical protein IE7_02275 [Bacillus cereus BAG4O-1]
gi|206733408|gb|EDZ50580.1| 2Fe-2S domain protein [Bacillus cereus AH1134]
gi|228604613|gb|EEK62074.1| hypothetical protein bcere0005_22040 [Bacillus cereus 172560W]
gi|363622286|gb|EHL73455.1| hypothetical protein HMPREF1014_02465 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401100089|gb|EJQ08087.1| hypothetical protein IE1_03061 [Bacillus cereus BAG3O-2]
gi|401119386|gb|EJQ27201.1| hypothetical protein IE7_02275 [Bacillus cereus BAG4O-1]
Length = 315
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 28/224 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + KD+ P+ V + VLY+D GE++ CPHR A LS GQ+++G+L
Sbjct: 13 WYAVSYVKDI-KKIPVKKRVAGKDFVLYRDEKGEVQALSPYCPHRGADLSLGQVVNGKLV 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-MSQKTPPNPDKL 201
C YHGW+F+ G CV+IP P + IP+ A +Y VKE G++W++ S++ PP
Sbjct: 72 CPYHGWEFDSCGTCVRIPSQP-NKPIPKFAHTFSYPVKEKIGLIWIYPDSEENPPEWQTF 130
Query: 202 PWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
EN F F H + +E+++D AH+ H +T ++ A+ +
Sbjct: 131 HVMENTPFKLSFFHATWNAHL-----TRSIESVLDIAHLAYVHKKT--IGRKTKAESTNY 183
Query: 260 EVTERTDR------------GFAGRW----GKEKDEPLPNFLRF 287
++ D+ F +W GK+++E ++ F
Sbjct: 184 KLEGTLDQFIFSNGDAYLEYKFPHQWMLHSGKQENESFIQYITF 227
>gi|261342346|ref|ZP_05970204.1| iron-sulfur cluster-binding protein, Rieske family [Enterobacter
cancerogenus ATCC 35316]
gi|288314981|gb|EFC53919.1| iron-sulfur cluster-binding protein, Rieske family [Enterobacter
cancerogenus ATCC 35316]
Length = 340
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA K P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + + A F + ++ LEN+MDP H H
Sbjct: 133 LSFPDELADTDNFSNFLCTAGWKCNYQYALENVMDPMHGTYLH 175
>gi|194291340|ref|YP_002007247.1| oxidoreductase, rieske (2fe-2S) region [Cupriavidus taiwanensis LMG
19424]
gi|193225244|emb|CAQ71186.1| putative oxidoreductase, putative Rieske (2Fe-2S) region
[Cupriavidus taiwanensis LMG 19424]
Length = 353
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 5/184 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V AP+G+T Q IVL++DG G++ +DRCPHR A+LS G + R+
Sbjct: 21 WYPVAASWAVTH-APIGITRLSQNIVLWRDGAGQVHALEDRCPHRGARLSMGWNLGDRVA 79
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP---NPD 199
C YHG + G+G+ +P + + + CVR+Y V+E G +++W + P +PD
Sbjct: 80 CWYHGVEVGGDGQVKSVPAVES-CPLEGRTCVRSYPVQEQAGAIFLWFGDQAPQGEGSPD 138
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
+L E + ++ ++N+MDP H H + A E + +
Sbjct: 139 ELRLPEELVSEEHSHFLCVAHWDCNYRYAIDNVMDPMHGAYLHAVSHSMASGEKSAVMQI 198
Query: 260 EVTE 263
TE
Sbjct: 199 RETE 202
>gi|148555225|ref|YP_001262807.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148500415|gb|ABQ68669.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 362
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 89/183 (48%), Gaps = 18/183 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + D+ AP + V + I L++ +G DRCPHR A L +G+L+ L+
Sbjct: 8 WYVAGWSGDL-GPAPRRIRVLGEWIALFRLADGTAAAIGDRCPHRFASLGDGKLVGDSLQ 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F+ +G+CV P D +P VR+Y + E G +WVW + +P +P
Sbjct: 67 CPYHGLRFDRDGRCVHNPH--GDGSVPAGGGVRSYPLVERHGALWVWTGDRGRADPAAIP 124
Query: 203 WFENFARPGFQDVSTIH---ELPYDHSILLENLMDPAHIPISH---------DRTDWTAK 250
F F P VS H PY+ ++ +NL+D +H H DRT +
Sbjct: 125 DFARFDDPALA-VSRGHLKVTAPYE--LVTDNLLDLSHAAFIHPFLASPDAADRTRTGVR 181
Query: 251 RED 253
+ED
Sbjct: 182 QED 184
>gi|428305773|ref|YP_007142598.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Crinalium
epipsammum PCC 9333]
gi|428247308|gb|AFZ13088.1| Rieske (2Fe-2S) iron-sulfur domain protein [Crinalium epipsammum
PCC 9333]
Length = 340
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 133/302 (44%), Gaps = 25/302 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + L+ ++ + L TV + + +++ +G+ +DRC HR ++LS G++ G L+
Sbjct: 7 WYVVALSTELKPNKVLSCTVLGEWLAIFRGDDGKSVALRDRCMHRNSRLSRGKVCQGNLQ 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP--NPDK 200
C YHGW ++ GK V +P + K+ S + Y+ KE G V+V ++ + P K
Sbjct: 67 CPYHGWVYDKNGKVVAVPAEGDNFKMLDSRQAKLYQTKEQDGYVYVRLTDQPSEEFEPFK 126
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH---------DRTDWTAKR 251
+P+ + PG++ V I+ + + EN +D H H + + T +R
Sbjct: 127 MPY---YGEPGWETVRVINRFHNNVTNCAENFIDIPHTASVHPGVFRTPRKQKLEMTVER 183
Query: 252 EDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFT 311
D L E T+ G+ + K + + + F P + V+ G+ F
Sbjct: 184 RDGSVLVNYRNETTNLGWYKHFLNPKGDEIKHTDSFYMPNITS-----VEYNMGKHRRFF 238
Query: 312 GLFLCRPTGQGKSMLI--VRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVL 369
P + +++ V F + +A+ F W A + QD+ L Q EV+
Sbjct: 239 ITSQSIPETENSTLVYTDVTFNYGILNKIARPFVHW----TAQHIINQDVEILGIQQEVI 294
Query: 370 MK 371
K
Sbjct: 295 EK 296
>gi|333896094|ref|YP_004469968.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Thermoanaerobacterium xylanolyticum LX-11]
gi|333111359|gb|AEF16296.1| Rieske (2Fe-2S) iron-sulfur domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 327
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 92/168 (54%), Gaps = 10/168 (5%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WY + +K++ + P+G+T F Q++V ++D + C D+C HR A L+ G++ + +
Sbjct: 5 QWYAVLDSKELKKNKPIGVTRFSQKLVFWRDELDNISCIFDKCCHRGASLALGKVANNHI 64
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
+C +HG++++ GK IP D + + V +Y KE+ G +WVW + P K+
Sbjct: 65 QCPFHGFKYDSSGKVTSIPANGKDRPVLSNFKVNSYIAKEAYGFIWVWYGEPRENLP-KI 123
Query: 202 PWFEN----FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
+FE F+ GF ++ +H ++ +EN +D H+P H+ T
Sbjct: 124 KFFEELKEGFSYGGFSEIWRVH-----YTRAIENQLDVVHLPFVHNTT 166
>gi|73539609|ref|YP_299976.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia eutropha
JMP134]
gi|159464211|ref|XP_001690335.1| hypothetical protein CHLREDRAFT_114479 [Chlamydomonas reinhardtii]
gi|72122946|gb|AAZ65132.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
gi|158279835|gb|EDP05594.1| predicted protein [Chlamydomonas reinhardtii]
Length = 349
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 21/172 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + D DA + TV D+ + +Y+ +G L +DRC HRLA LS G+ L
Sbjct: 7 WYMVGWSTDFTADAIVPFTVMDEPLAIYRKTDGSLAALEDRCCHRLAPLSVGRKEGDELR 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK-------TP 195
C+YHG +F +G+C ++ P +I CVR Y + E G WVWM + P
Sbjct: 67 CMYHGLKFAADGRCTEV---PGQDRISPRVCVRAYPIVEKHGAAWVWMGEAEKADEALVP 123
Query: 196 P--NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
P PD W + ++ + ++ +NL+D +H P H+ T
Sbjct: 124 PIIGPDNAEWAMQ---------CSTFDMDVNAELISDNLLDLSHAPFVHEAT 166
>gi|402845723|ref|ZP_10894056.1| Rieske [2Fe-2S] domain protein [Klebsiella sp. OBRC7]
gi|402270174|gb|EJU19442.1| Rieske [2Fe-2S] domain protein [Klebsiella sp. OBRC7]
Length = 340
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 90/163 (55%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYSVQEAHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + + A R + + ++ LEN+MDP H H
Sbjct: 133 LNFPQELADRDKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|423110296|ref|ZP_17097991.1| hypothetical protein HMPREF9687_03542 [Klebsiella oxytoca 10-5243]
gi|376380281|gb|EHS93029.1| hypothetical protein HMPREF9687_03542 [Klebsiella oxytoca 10-5243]
Length = 340
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYSVQEAHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFARPG-FQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + E A F ++ LEN+MDP H H
Sbjct: 133 LSFPEELANSDKFSHFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|423116230|ref|ZP_17103921.1| hypothetical protein HMPREF9689_03978 [Klebsiella oxytoca 10-5245]
gi|376378412|gb|EHS91171.1| hypothetical protein HMPREF9689_03978 [Klebsiella oxytoca 10-5245]
Length = 340
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYSVQEAHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFARPG-FQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + E A F ++ LEN+MDP H H
Sbjct: 133 LSFPEELANSDKFSHFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|428223044|ref|YP_007107214.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
gi|427996384|gb|AFY75079.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
Length = 331
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 97/186 (52%), Gaps = 4/186 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + L+K++ + P+G+T +V+Y++ N E + C HR A LS G + +
Sbjct: 6 WYAICLSKEL-ESKPIGITALGSDLVIYRNSNNEPIVMSNLCVHRGASLSSGWVKQDCIV 64
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+++ +G C+KIP + IP A V TY +E G++W ++ + +P
Sbjct: 65 CPYHGWEYKSDGSCIKIPSYKENVPIPNKARVLTYPTQEKYGLIWAFIGDISESERPPIP 124
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
F + P ++ + + +++ +EN +D AH P H + E+++ ++V
Sbjct: 125 IFSEYDDPKYKKLWGDYSWDVNYTRAVENGIDIAHAPFVHAGS--FGNPEESEVENYQV- 181
Query: 263 ERTDRG 268
E++D G
Sbjct: 182 EKSDWG 187
>gi|224082298|ref|XP_002306638.1| predicted protein [Populus trichocarpa]
gi|222856087|gb|EEE93634.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 151/334 (45%), Gaps = 39/334 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D+ D + + F++ VL++ +G+ C ++ C HR L G + +GR+
Sbjct: 218 WYPVAFSTDLKDGTMIPIDCFEEPWVLFRGMDGKPGCVRNTCAHRACPLHLGSVNEGRVR 277
Query: 143 CLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW++ +GKC K+P + KI C E +G++ VW P L
Sbjct: 278 CPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCF------EQEGMILVWPGSDPPAA--TL 329
Query: 202 PWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
P + PGFQ + ELP +H +LL+NL+D AH P +H T AK L
Sbjct: 330 PSLQ--PPPGFQVHAEIVMELPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKF 385
Query: 261 VTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH---------YFT 311
+T + G G W +P P + F PC++ + + SK G+ +
Sbjct: 386 LTPAS--GLQGYW-----DPYPIDMEFRPPCMVLSTIGI--SKPGKLEGQSTRECATHLH 436
Query: 312 GLFLCRPTGQGKSMLIVRFGATKRSPLAKLFP--KWYFHQNASKVFEQDMGFLSSQNEVL 369
L +C P+ + K+ L+ R + +P+ K P + + A +V +D+ + Q E +
Sbjct: 437 QLHVCLPSSRHKTRLLYRM-SLDFAPVLKHVPFMHYLWRHFAEQVLNEDLRLVLGQQERM 495
Query: 370 MKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
+ ++ S D YR W D V G
Sbjct: 496 INGA----NVWNWPVSYDKLGVRYRLWRDAVEKG 525
>gi|167578135|ref|ZP_02371009.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
thailandensis TXDOH]
Length = 343
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V AP+G+T +QIVL++D G + +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGITRLSEQIVLWRDREGNVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G G K+P + ++ + ACVR+Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQACVRSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ P + + ++ ++N+MDP H H
Sbjct: 144 LPDELVAPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH 183
>gi|333907699|ref|YP_004481285.1| Vanillate monooxygenase [Marinomonas posidonica IVIA-Po-181]
gi|333477705|gb|AEF54366.1| Vanillate monooxygenase [Marinomonas posidonica IVIA-Po-181]
Length = 344
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 13/216 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++D+ D PL +T+ ++ +V+Y+ +G +DRCPHR A LS+G++ +
Sbjct: 8 WYCAGWSQDLLD-KPLAITLLNEPVVIYRGEDGTAIALEDRCPHRFAPLSKGKVQGNNIA 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK-L 201
C YHG F+ +G P + IP+ V+ Y V E+QGV+W+WM + + +P +
Sbjct: 67 CGYHGLVFDAKGNGTYNPH--GNGAIPKGCSVKYYPVIEAQGVIWIWMGEASQADPASII 124
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
E R G+ V + + ++ +NL+D +H+P H ++ P GF+
Sbjct: 125 DIGECDKREGWTSVHGYLNVKCHYELVADNLLDLSHVPYLHSFL----SSDEEPPAGFKE 180
Query: 262 TERTDRGFAGRWGKEKD-----EPLPNFLRFEAPCV 292
+ + W + PL + L EAP +
Sbjct: 181 ERKVEVEGNTVWSMHWNYNCPVSPLFSLLWDEAPAI 216
>gi|421604687|ref|ZP_16046796.1| vanillate O-demethylase oxygenase [Bradyrhizobium sp. CCGE-LA001]
gi|404263204|gb|EJZ28775.1| vanillate O-demethylase oxygenase [Bradyrhizobium sp. CCGE-LA001]
Length = 343
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 138/329 (41%), Gaps = 39/329 (11%)
Query: 96 APLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 155
A L T+ + IV+Y+ +G + +D C HRL LS+G+L + C YHG ++ +G+
Sbjct: 16 ALLPRTICGKHIVMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGR 75
Query: 156 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP---WFENFARPGF 212
C +P+ I SACVR Y V E +W+WM +P +P W + A G
Sbjct: 76 CTF---MPSQETINPSACVRAYPVVERHRYIWLWMGDPALADPALVPDMHWNHDPAWAG- 131
Query: 213 QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGR 272
D TIH + D+ ++L+NLMD H H + E F+VT R
Sbjct: 132 -DGKTIH-VKCDYRLVLDNLMDLTHETFVHGS---SIGNEAVAEAPFDVTHGEKTVTVTR 186
Query: 273 WGKEKDEPLP---------------NFLRFEAPCVLQNNRELVDSKTG-----EKHYFTG 312
W ++ EP P +RFEAPC + + + + TG G
Sbjct: 187 WMRDI-EPPPFWAKQLGKPGLVDRWQIIRFEAPCTIAIDVGVAPTGTGAPEGDRSQGVNG 245
Query: 313 LFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKE 372
L T + + + + L + + S +F +D L +Q + +
Sbjct: 246 FVLNTITPETEKTCHYFWAFVRNYQLGEQRITTEIREGVSGIFHEDELILEAQQRAM--D 303
Query: 373 TVPTKELY-LNLRSSDTWVAEYRKWMDKV 400
P + Y LN+ + W R+ +DK+
Sbjct: 304 ENPDRIFYNLNIDAGAMWT---RRLIDKM 329
>gi|419764691|ref|ZP_14290931.1| rieske [2Fe-2S] domain protein [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397743274|gb|EJK90492.1| rieske [2Fe-2S] domain protein [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 371
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 48 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 106
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA + P CVR+Y V E+ G +++W PD+
Sbjct: 107 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYSVHEAHGAIFLWFGVTADQQPDE 163
Query: 201 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + E A + + ++ LEN+MDP H H
Sbjct: 164 LSFPEELADSEKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 206
>gi|224143360|ref|XP_002324929.1| predicted protein [Populus trichocarpa]
gi|222866363|gb|EEF03494.1| predicted protein [Populus trichocarpa]
Length = 68
Score = 99.4 bits (246), Expect = 5e-18, Method: Composition-based stats.
Identities = 46/68 (67%), Positives = 51/68 (75%)
Query: 446 MHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGRQWKAFCLAS 505
MHAP LANRYFR+VIHCK S +KAF+TWK L ++ ALT LAIL SGRQ KAF S
Sbjct: 1 MHAPYLANRYFRNVIHCKASCSALKAFNTWKKDLYAISLALTALAILVSGRQRKAFLFVS 60
Query: 506 ASLCLAGV 513
SLCLAGV
Sbjct: 61 TSLCLAGV 68
>gi|428777418|ref|YP_007169205.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Halothece
sp. PCC 7418]
gi|428691697|gb|AFZ44991.1| Rieske (2Fe-2S) iron-sulfur domain protein [Halothece sp. PCC 7418]
Length = 354
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 84/170 (49%), Gaps = 11/170 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ D+ + +TV+ Q I +++D G++ D CPH+ +G + L
Sbjct: 26 WYPVAWAHDLKRETVQQVTVWYQNIAIFRDEAGDVHALADACPHKGVAFHKGTVNGNHLV 85
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-----MSQKTPPN 197
C YHGW+F EGKCV IP + K+PR AC R+Y +E G++WV+ ++++ P
Sbjct: 86 CPYHGWEFNSEGKCVHIPYFSEEQKLPR-ACARSYPTQEKYGLIWVFPGEAELAEEKP-- 142
Query: 198 PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDW 247
LP FEN P + V S+ EN MD H + D W
Sbjct: 143 ILNLPEFEN---PKWLRVPVTARFNAHFSMCNENTMDVFHGYLHQDLQGW 189
>gi|334132860|ref|ZP_08506615.1| Putative vanillate O-demethylase oxygenase subunit A
[Methyloversatilis universalis FAM5]
gi|333441770|gb|EGK69742.1| Putative vanillate O-demethylase oxygenase subunit A
[Methyloversatilis universalis FAM5]
Length = 364
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 65 AEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRC 124
A E++ ER++ T+ WY L+ +VP + + D +++Y+ G DRC
Sbjct: 5 ALEKKVERKLEFL--TDCWYVAALSSEVPAEGLFHRRILDTSVLIYRKAEGAPVALHDRC 62
Query: 125 PHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQG 184
PHR A L G+ I + C YH +F+ G C P + IP++A VR++ + E G
Sbjct: 63 PHRFAPLHLGKRIGDDVVCAYHALRFDCSGACTHNPH--GNGLIPKAAKVRSFPLLEKYG 120
Query: 185 VVWVWMSQKTPPNPDKLPWFE--NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
VW+WM +P KLP F + P T + ++ ++++N+MD +H I H
Sbjct: 121 FVWIWMGDAALADPAKLPDFGPLDDGHPNAL-AHTYMRMDVNYELIIDNVMDLSH--IDH 177
Query: 243 DRTDWTAKREDAQPLGFEVTERTDRGFAGRW 273
++ + R PL V E D RW
Sbjct: 178 VHSEIISTRGQLSPLVPAVKEGAD-SVNARW 207
>gi|148270571|ref|YP_001245031.1| Rieske (2Fe-2S) domain-containing protein [Thermotoga petrophila
RKU-1]
gi|222100224|ref|YP_002534792.1| Rieske (2Fe-2S) domain protein [Thermotoga neapolitana DSM 4359]
gi|281412879|ref|YP_003346958.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Thermotoga
naphthophila RKU-10]
gi|147736115|gb|ABQ47455.1| Rieske (2Fe-2S) domain protein [Thermotoga petrophila RKU-1]
gi|221572614|gb|ACM23426.1| Rieske (2Fe-2S) domain protein [Thermotoga neapolitana DSM 4359]
gi|281373982|gb|ADA67544.1| Rieske (2Fe-2S) iron-sulphur domain protein [Thermotoga
naphthophila RKU-10]
Length = 324
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 152/345 (44%), Gaps = 46/345 (13%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+ + + +V P+G+ + +V ++D G++ +D C HR A+LS G++I+ R++
Sbjct: 5 WFAVLSSNEV-RRKPVGVRRLGRDLVFWRDSLGKVYALEDFCVHRRARLSAGKVINDRIQ 63
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C +HG++++G G+ IP L + K+P V +Y V E ++W+W + P+K P
Sbjct: 64 CPFHGFEYDGNGRVRLIPALGKNYKVPDRFRVNSYPVYEKNNIIWLWFGEG---EPEKEP 120
Query: 203 WF-----ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKRE----- 252
F E+FA F+++ + P+ ++ EN +D H+P H T R
Sbjct: 121 KFFDDIDEDFAYAEFRELWNV---PFPRAV--ENQLDVMHLPFVHRTTIGRGNRTLVHGP 175
Query: 253 -----DAQPLGFEVTERTDRGFAGRWGKE-KDEPLPNFLRFEAPCVLQNNRELVDSKTGE 306
D F V DRG + +E E +L F P + QN+ + T
Sbjct: 176 VVKWIDEDSFIFYVFNEVDRGQRVKRPEELSGEESRVYLEFIFPNLWQNH---ISEGTRV 232
Query: 307 KHYFTGLFLCRPTGQGKSMLIVRF--GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSS 364
+F P + K+M+ +RF T P+ + + N + QD + +
Sbjct: 233 VAFFV------PVDRQKTMIYLRFYVKMTGLKPVDSIIARLSMPLNRI-ILHQDRRVVET 285
Query: 365 QNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFG 409
Q + K+ L D + E+RK + K + + FG
Sbjct: 286 QERDIRKDV---------LVQGDLPIMEFRKRLYKEKKLIDFLFG 321
>gi|218232265|ref|YP_002367205.1| vanillate O-demethylase oxygenase [Bacillus cereus B4264]
gi|218160222|gb|ACK60214.1| vanillate O-demethylase oxygenase subunit [Bacillus cereus B4264]
Length = 315
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 28/224 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + KD+ P+ + + VLY+D GE++ CPHR A LS GQ+++G+L
Sbjct: 13 WYAVSYVKDI-KKIPVKKRIAGKDFVLYRDEKGEVQALSPYCPHRGADLSLGQVVNGKLV 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-MSQKTPPNPDKL 201
C YHGW+F+ G CV+IP P + IP+ A +Y VKE G++W++ S++ PP
Sbjct: 72 CPYHGWEFDSCGTCVRIPSQP-NKPIPKFAHTFSYPVKEKIGLIWIYPDSEENPPEWQTF 130
Query: 202 PWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
EN F F H + +E+++D AH+ H +T ++ A+ +
Sbjct: 131 HVMENTPFKLSFFHATWNAHL-----TRSIESVLDIAHLAYVHKKT--IGRKTKAESTNY 183
Query: 260 EVTERTDR------------GFAGRW----GKEKDEPLPNFLRF 287
++ D+ F +W GK+++E ++ F
Sbjct: 184 KLEGTLDQFIFSNGDAYLEYKFPHQWMLHSGKQENESFIQYITF 227
>gi|91779910|ref|YP_555118.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
xenovorans LB400]
gi|91692570|gb|ABE35768.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
xenovorans LB400]
Length = 363
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V DAP+G+T QIVL++D G++R +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-GDAPVGITRLGDQIVLWRDKEGKVRALEDRCPHRGARLSLGWNLGGSVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G K+P + ++ + CV++Y V+E G +++W P L
Sbjct: 85 CWYHGIEVDGGGTVTKVPAV-SNCPLEGQKCVKSYPVEEHAGAIFLWFGDDAHKEPAPLV 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVGEEYASFLCMSHWKCNYQYAIDNVMDPMHGAYLH 183
>gi|336247113|ref|YP_004590823.1| 3-phenylpropionate dioxygenase subunit alpha [Enterobacter
aerogenes KCTC 2190]
gi|444354768|ref|YP_007390912.1| Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
[Enterobacter aerogenes EA1509E]
gi|334733169|gb|AEG95544.1| 3-phenylpropionate dioxygenase, alpha subunit [Enterobacter
aerogenes KCTC 2190]
gi|443905598|emb|CCG33372.1| Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82)
[Enterobacter aerogenes EA1509E]
Length = 340
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFAR-PGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + E A + + ++ LEN+MDP H H
Sbjct: 133 LSFPEELANHEKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|120609826|ref|YP_969504.1| Rieske (2Fe-2S) domain-containing protein [Acidovorax citrulli
AAC00-1]
gi|120588290|gb|ABM31730.1| Rieske (2Fe-2S) domain protein [Acidovorax citrulli AAC00-1]
Length = 373
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 91/181 (50%), Gaps = 13/181 (7%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ D+ APL + Q +VL++ G + DRCPHR A+LS G++ GRLE
Sbjct: 43 WHPVASACDL-GAAPLAAHLLGQPLVLWRGDAGRAHAFVDRCPHRGARLSLGRVEGGRLE 101
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQFEG G+CV +P LP + P ++V+E+ G++WV ++ +
Sbjct: 102 CPYHGWQFEGRGRCVHVPALP-QFQPPAGHRAGAFDVQEAHGLLWVRLAAGPQGEGEGDA 160
Query: 203 WFENFARPGFQDVS-----TIHELPYDHSI----LLENLMDPAHIPISHDRTDWTAKRED 253
P F S ++ PYD + ++EN +D +H H+ W R+
Sbjct: 161 IAAGLPLPAFAAESDARLRKLNCGPYDVAASAPRIVENFLDMSHFGFVHE--GWLGARDA 218
Query: 254 A 254
A
Sbjct: 219 A 219
>gi|349574249|ref|ZP_08886206.1| Rieske family iron-sulfur cluster-binding protein [Neisseria
shayeganii 871]
gi|348014197|gb|EGY53084.1| Rieske family iron-sulfur cluster-binding protein [Neisseria
shayeganii 871]
Length = 365
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 137/322 (42%), Gaps = 30/322 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +DV P LT+FD+ V++ GNG +DRCPHR A LS G++ +G++
Sbjct: 36 WYIAATERDV-RRKPQCLTLFDRHYVVFHAGNGRFAAMEDRCPHRNAPLSAGKVCNGQIR 94
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQF +G+ +IP L A +P +R V + +VW+ P P LP
Sbjct: 95 CPYHGWQFAADGRLARIPALDGQA-LP---AIRIPTVHCTAQDGYVWLCPGNPATPAPLP 150
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPL----- 257
F + G+ + LEN +D H HD +A + +
Sbjct: 151 -FPHLNEAGWTSFRMRTRFAAPVAQCLENFLDCPHAVYVHDSWFRSATGKPVRATLRHLA 209
Query: 258 -GFEV---TERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGL 313
G EV E ++ + R + + + RF AP + VD + ++ ++
Sbjct: 210 DGAEVEYENEPREQSWVWRLLQNSGTDMRHTDRFIAPATSR-----VDYRFSDRKHYIIT 264
Query: 314 FLCRPTGQGKSML--IVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLM- 370
C P G+ ++ + ++ F + PL +L F + + QD+ + Q + +
Sbjct: 265 SSCTPIGENETEVHTVISFRYGRLGPLVRLV----FEPLSRLIIGQDVAIMQRQRDNIRR 320
Query: 371 ---KETVPTKELYLNLRSSDTW 389
+E T E L L + W
Sbjct: 321 FGGRERFYTSEADLLLPAIQAW 342
>gi|425074949|ref|ZP_18478052.1| hypothetical protein HMPREF1305_00831 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425085585|ref|ZP_18488678.1| hypothetical protein HMPREF1307_01005 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405595152|gb|EKB68542.1| hypothetical protein HMPREF1305_00831 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405607617|gb|EKB80586.1| hypothetical protein HMPREF1307_01005 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
Length = 340
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + E A + + ++ LEN+MDP H H
Sbjct: 133 LSFPEELADHKKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|381162433|ref|ZP_09871663.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora azurea NA-128]
gi|418460036|ref|ZP_13031143.1| vanillate demethylase subunit A [Saccharomonospora azurea SZMC
14600]
gi|359739937|gb|EHK88790.1| vanillate demethylase subunit A [Saccharomonospora azurea SZMC
14600]
gi|379254338|gb|EHY88264.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora azurea NA-128]
Length = 377
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 133/334 (39%), Gaps = 35/334 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +V PL T+ + L+++ G D C HRLA LS+G+++ L+
Sbjct: 29 WYVAAWDHEVTTKKPLARTIAGVPLALWRNSEGRAVALADACWHRLAPLSKGKILGDELQ 88
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG ++ G+C +PA I SA V +Y V E VWVW+ +PD +P
Sbjct: 89 CPYHGLRYNATGRCTA---MPAQETINPSAMVPSYPVVERYRYVWVWVGDPDLADPDTVP 145
Query: 203 WFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
PG+ D TIH ++ ++L+NLMD H H + +E+ F+V
Sbjct: 146 DMHQMDDPGWAGDGETIH-ADCNYQLVLDNLMDLTHEEFVHAS---SIGQEELSEAEFDV 201
Query: 262 TERTDRGFAGRWGKEKDEP----------LPNF---------LRFEAPCVLQNNRELVDS 302
+ RW ++ D P P F + FEAP + + + +
Sbjct: 202 VHEGNTVTVTRWMRDIDPPPFWLKNMRDKFPGFEGKVDRWQIITFEAPSTICIDVGVAKA 261
Query: 303 KTG-----EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQ 357
TG G + T + + + L Q+ VF +
Sbjct: 262 GTGAPEGDRSQGVNGYVMNTITPETHRSCHYFWAFMRNYRLDSQTITTQLRQSVHGVFAE 321
Query: 358 DMGFLSSQNEVLMKETVPTKELY-LNLRSSDTWV 390
D L +Q + + + P E Y LN+ + WV
Sbjct: 322 DEDMLRAQQDAI--DANPDHEFYSLNIDTGGMWV 353
>gi|170289277|ref|YP_001739515.1| Rieske (2Fe-2S) domain-containing protein [Thermotoga sp. RQ2]
gi|170176780|gb|ACB09832.1| Rieske (2Fe-2S) domain protein [Thermotoga sp. RQ2]
Length = 321
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 152/345 (44%), Gaps = 46/345 (13%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+ + + +V P+G+ + +V ++D G++ +D C HR A+LS G++I+ R++
Sbjct: 2 WFAVLSSNEV-RRKPVGVRRLGRDLVFWRDSLGKVYALEDFCVHRRARLSAGKVINDRIQ 60
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C +HG++++G G+ IP L + K+P V +Y V E ++W+W + P+K P
Sbjct: 61 CPFHGFEYDGNGRVRLIPALGKNYKVPDRFRVNSYPVYEKNNIIWLWFGEG---EPEKEP 117
Query: 203 WF-----ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKRE----- 252
F E+FA F+++ + P+ ++ EN +D H+P H T R
Sbjct: 118 KFFDDIDEDFAYAEFRELWNV---PFPRAV--ENQLDVMHLPFVHRTTIGRGNRTLVHGP 172
Query: 253 -----DAQPLGFEVTERTDRGFAGRWGKE-KDEPLPNFLRFEAPCVLQNNRELVDSKTGE 306
D F V DRG + +E E +L F P + QN+ + T
Sbjct: 173 VVKWIDEDSFIFYVFNEVDRGQRVKRPEELSGEESRVYLEFIFPNLWQNH---ISEGTRV 229
Query: 307 KHYFTGLFLCRPTGQGKSMLIVRF--GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSS 364
+F P + K+M+ +RF T P+ + + N + QD + +
Sbjct: 230 VAFFV------PVDRQKTMIYLRFYVKMTGLKPVDSIIARLSMPLNRI-ILHQDRRVVET 282
Query: 365 QNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFG 409
Q + K+ L D + E+RK + K + + FG
Sbjct: 283 QERDIRKDV---------LVQGDLPIMEFRKRLYKEKKLIDFLFG 318
>gi|423122072|ref|ZP_17109756.1| hypothetical protein HMPREF9690_04078 [Klebsiella oxytoca 10-5246]
gi|376393380|gb|EHT06040.1| hypothetical protein HMPREF9690_04078 [Klebsiella oxytoca 10-5246]
Length = 340
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +GEL+ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGELQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA K P CVR+Y V+E+ G +++W + P+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCVRSYHVQEAHGAIFLWFAATPDQQPEP 132
Query: 201 LPWFENFARPG-FQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + E A + + ++ LEN+MDP H H
Sbjct: 133 LTFPEELADSDKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|167647208|ref|YP_001684871.1| vanillate monooxygenase [Caulobacter sp. K31]
gi|167349638|gb|ABZ72373.1| Vanillate monooxygenase [Caulobacter sp. K31]
Length = 347
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 29/174 (16%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
+ WY +++ D PL T+ D IVLY+ G++ DRCPHR A LS G L DG+
Sbjct: 8 DAWYQAAFAREI-GDKPLARTLLDVPIVLYRSA-GKVVALHDRCPHRFAPLSMGALRDGQ 65
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG F +G+CV P +PR+ VR Y V E VVW+WM +P
Sbjct: 66 IICGYHGVGFGDDGRCVHNPH----GALPRAMRVRAYPVVERHTVVWIWMGDTRKADPAL 121
Query: 201 LPWFENFARPGFQDVSTIHELP------------YDHSILLENLMDPAHIPISH 242
+P D+S I E P ++ ++++NLMD +H H
Sbjct: 122 IP-----------DLSFIDETPETARICFYIPTAANYRLVVDNLMDLSHADYLH 164
>gi|124268855|ref|YP_001022859.1| oxidoreductase subunit alpha [Methylibium petroleiphilum PM1]
gi|124261630|gb|ABM96624.1| oxidoreductase alpha subunit [Methylibium petroleiphilum PM1]
Length = 407
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 94/178 (52%), Gaps = 9/178 (5%)
Query: 71 ERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGNGELRCYQDRCPHRLA 129
E QV + WY + + +G T+ +VL++ + GE+ + RC H+
Sbjct: 45 EIQVKETLIRNLWYVAGTSDEFAPGQLVGQTIVGLPLVLWRPEAGGEVVAFDGRCCHKRM 104
Query: 130 KLSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 188
L+ G+L+ DG LEC YHG F+ GKCVKIP P A IP A +R Y + E G+VW+
Sbjct: 105 PLAAGKLLADGTLECAYHGLCFDSAGKCVKIPSQPGRA-IPSRAKLRPYPIVEQDGMVWI 163
Query: 189 WMSQKTPP--NPDKLPWFENFARPGFQDVSTIH-ELPYDHSILLENLMDPAHIPISHD 243
WM P P ++P A P ++ + + E+P ++ +L+ENL+D +H HD
Sbjct: 164 WMGDDANPALRPPRIP---ELASPEWEAIRVQNAEVPTNYLLLIENLLDISHFYPLHD 218
>gi|420249027|ref|ZP_14752278.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
gi|398064681|gb|EJL56358.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
Length = 362
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V +AP+GLT +QIVL++D +G++ +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-GNAPIGLTRLSEQIVLWRDQDGKVHALEDRCPHRGARLSLGWNLGNRVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G +P + A + CV++Y V+E G +++W P L
Sbjct: 85 CWYHGIEVDGSGTVQAVPAVSA-CPLEGQKCVKSYPVEEHAGAIFLWFGDDAHKEPTSLA 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVGAEYSQFLCVSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|213385123|dbj|BAG84251.1| putative oxygenase [Streptomyces griseoviridis]
Length = 442
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 88/167 (52%), Gaps = 4/167 (2%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WYP+ ++DV + P G +++V+++D G + RCPH+ A L G++ L
Sbjct: 5 QWYPVARSRDVKQNKPKGAMRLGEEVVMWRDARGNAVVQEARCPHKGANLGAGRINQNAL 64
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-K 200
EC YHG++F G C +P L ++A+IP+ +R Y V+E +VW+W ++ P+
Sbjct: 65 ECPYHGFRFGAGGDCEAVPCLGSEARIPKGLRIRNYPVREEHDMVWMWWGEERESYPEID 124
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDW 247
+P R V+ + P ++ +E++++ H P H R W
Sbjct: 125 IP--PEVTRWKGVHVTGSWQQPVHYTRYIESMLEFYHAPFVH-RGSW 168
>gi|302847458|ref|XP_002955263.1| hypothetical protein VOLCADRAFT_34353 [Volvox carteri f.
nagariensis]
gi|300259335|gb|EFJ43563.1| hypothetical protein VOLCADRAFT_34353 [Volvox carteri f.
nagariensis]
Length = 129
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
++W ++WYP+ + P T+ Q +VL++DG+G R ++D CPHRLA LSEG++
Sbjct: 2 FNWFQQWYPVAALDALDPTRPHAFTLLGQDLVLWRDGSGRWRAFKDACPHRLAPLSEGRI 61
Query: 137 -IDGRLECLYHGWQFEGEGKCVKIPQLPAD---AKIPRSACVRTYEVKESQGVVWVW 189
DG L C YH W+F+G G C +P D + PRS C +Y E G++WVW
Sbjct: 62 EKDGTLLCAYHAWRFDGSGACTAMPFCSPDDPGRRNPRS-CAVSYPALERGGLLWVW 117
>gi|170721765|ref|YP_001749453.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas putida W619]
gi|169759768|gb|ACA73084.1| Rieske (2Fe-2S) domain protein [Pseudomonas putida W619]
Length = 341
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI-DGRL 141
WY L L DD P T+ + +VL+K +G +DRC HR AKLS+G + DG +
Sbjct: 13 WYAL-LPMAALDDGPKPFTLLGEALVLWKRPDGTPVAMRDRCCHRTAKLSKGFVSEDGNI 71
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW+++ G CVKIPQ P A IP A V+ Y +E G WV + P PD
Sbjct: 72 ACGYHGWEYDCSGACVKIPQNPTGA-IPPGAAVKAYHCQEKYGYAWVALDDPLQPIPD-- 128
Query: 202 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
F PG++ + +E + ++EN D +H H + QP +E
Sbjct: 129 --FPEDGAPGYRRIFQFYEEWKTSPLRVMENSFDNSHFSFVHKAN--FGLFDQPQPASYE 184
Query: 261 VTERTDRGF 269
E TD GF
Sbjct: 185 FRE-TDYGF 192
>gi|167578934|ref|ZP_02371808.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
thailandensis TXDOH]
Length = 480
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 67/123 (54%), Gaps = 2/123 (1%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+D T P+ L++ V APLG+ +Q +VL++D +G +DRC HR A LS G++
Sbjct: 9 FDSTARGMPVALSEQVSGKAPLGVICMEQPLVLFRDASGAACAMEDRCAHRRAPLSLGRI 68
Query: 137 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
D RL+C YHGW ++G G CV IP L A ++P R Y E G VW S
Sbjct: 69 TPDCRLQCAYHGWTYDGATGACVAIPNLSASERVPVRYAARAYRTLERDGFVWACASDAR 128
Query: 195 PPN 197
P+
Sbjct: 129 APD 131
>gi|365899304|ref|ZP_09437217.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3843]
gi|365419928|emb|CCE09759.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3843]
Length = 347
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 135/330 (40%), Gaps = 35/330 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +V A L T+ + +V+Y+ +G + +D C HRL LS+G+L +
Sbjct: 10 WYAAAWDAEV-KQALLPRTICGKHVVMYRKADGTVTALEDACWHRLVPLSKGRLEGDTVV 68
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F +G+C +P+ I SACVR Y E +W+WM +P +P
Sbjct: 69 CGYHGLKFNAQGRCTF---MPSQETINPSACVRAYPAIERHRFIWLWMGDPALADPADIP 125
Query: 203 ---WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
W + A G D TIH + D+ ++++NLMD H H + E F
Sbjct: 126 DMHWNHDPAWAG--DGKTIH-VKCDYRLVVDNLMDLTHETFVHGS---SIGNEAVAEAPF 179
Query: 260 EVTERTDRGFAGRW--------------GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
+VT RW GKE +RFEAPC + + + + TG
Sbjct: 180 DVTHGERTATVTRWMRGIEPPPFWAKQLGKEGLVDRWQIIRFEAPCTVTIDVGVAPAGTG 239
Query: 306 -----EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMG 360
G+ L T + + + + L++ + S +F +D
Sbjct: 240 APEGDRSQGVNGMVLNTITPETERTCHYFWAFVRNYQLSEQRLTTEIREGVSGIFREDEL 299
Query: 361 FLSSQNEVLMKETVPTKELY-LNLRSSDTW 389
L +Q + + P + Y LN+ + W
Sbjct: 300 ILEAQQRAM--DENPGRVFYNLNIDAGAMW 327
>gi|339324216|ref|YP_004683909.1| hypothetical protein CNE_1c00590 [Cupriavidus necator N-1]
gi|338164373|gb|AEI75428.1| hypothetical protein CNE_1c00590 [Cupriavidus necator N-1]
Length = 346
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 13/168 (7%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+W+P+ + D P +F + +VL+++ +G + DRCPHR A + G + DG L
Sbjct: 22 QWHPVLAIEQARGDGPFPARLFGRALVLWRNADG-WHAWDDRCPHRGAAFTLGAVRDGLL 80
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW+F G+C + P P PR AC T+ V+E G++WV + +L
Sbjct: 81 HCGYHGWRFASGGRCTRYPAHPELVPAPR-ACATTHAVREGYGLLWVRLGGDGTEAVPEL 139
Query: 202 PWFENFARPGFQDVSTIHEL--PYDHSI----LLENLMDPAHIPISHD 243
P F P + D H + PYD + L+EN +D AH HD
Sbjct: 140 PPF-----PEYDDAECRHVVCGPYDVATSAPRLVENFLDMAHFGYVHD 182
>gi|76817955|ref|YP_336975.1| putative Rieske iron-sulfur protein [Burkholderia pseudomallei
1710b]
gi|126455605|ref|YP_001074433.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1106a]
gi|167741281|ref|ZP_02414055.1| Rieske [Burkholderia pseudomallei 14]
gi|167818458|ref|ZP_02450138.1| Rieske [Burkholderia pseudomallei 91]
gi|167826843|ref|ZP_02458314.1| Rieske [Burkholderia pseudomallei 9]
gi|167848359|ref|ZP_02473867.1| Rieske [Burkholderia pseudomallei B7210]
gi|167905295|ref|ZP_02492500.1| Rieske [Burkholderia pseudomallei NCTC 13177]
gi|217422820|ref|ZP_03454322.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 576]
gi|226194756|ref|ZP_03790348.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pakistan 9]
gi|242312032|ref|ZP_04811049.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106b]
gi|254189417|ref|ZP_04895927.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pasteur 52237]
gi|254263186|ref|ZP_04954051.1| Rieske (2Fe-2S) domain protein [Burkholderia pseudomallei 1710a]
gi|403521665|ref|YP_006657234.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei BPC006]
gi|76582428|gb|ABA51902.1| putative rieske iron-sulfur protein [Burkholderia pseudomallei
1710b]
gi|126229373|gb|ABN92786.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106a]
gi|157937095|gb|EDO92765.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pasteur 52237]
gi|217393728|gb|EEC33748.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 576]
gi|225933100|gb|EEH29095.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pakistan 9]
gi|242135271|gb|EES21674.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106b]
gi|254214188|gb|EET03573.1| Rieske (2Fe-2S) domain protein [Burkholderia pseudomallei 1710a]
gi|403076732|gb|AFR18311.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei BPC006]
Length = 330
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+D W P+ L++ V A L + +Q +VL++D +G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 137 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAP 128
Query: 195 PP 196
PP
Sbjct: 129 PP 130
>gi|126442410|ref|YP_001061494.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 668]
gi|126221901|gb|ABN85406.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 668]
Length = 330
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+D W P+ L++ V A L + +Q +VL++D +G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 137 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAP 128
Query: 195 PP 196
PP
Sbjct: 129 PP 130
>gi|167565588|ref|ZP_02358504.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
oklahomensis EO147]
Length = 337
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V AP+G+T +QIVL++D G++ +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGMTRLSEQIVLWRDQQGQVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G G K+P + ++ + ACV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQACVKSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ P + + ++ ++N+MDP H H
Sbjct: 144 LPDELVAPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH 183
>gi|385206189|ref|ZP_10033059.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
gi|385186080|gb|EIF35354.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. Ch1-1]
Length = 363
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V DAP+G+T QIVL++D G++R +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-GDAPVGITRLGDQIVLWRDKEGKVRALEDRCPHRGARLSLGWNLGGSVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G K+P + ++ + CV++Y V+E G +++W P L
Sbjct: 85 CWYHGIEVDGGGTVTKVPAV-SNCPLEGQKCVKSYPVEEHAGAIFLWFGDDAHKEPAPLV 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVGEEYASFLCMSHWKCNYQYAIDNVMDPMHGAYLH 183
>gi|449493594|ref|XP_004159366.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
chloroplastic-like [Cucumis sativus]
Length = 371
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 153/387 (39%), Gaps = 88/387 (22%)
Query: 170 RSACVRTYEVKESQGVVWVWMSQKTPPNPD----------KLPWFENFARPGFQDVSTIH 219
+ AC Y G+VW W PN D K P+ P + +
Sbjct: 7 KKACAAVYPSTTQNGIVWFW------PNLDPKFKDIIMEKKPPFIPELDDPSYVKLEGNR 60
Query: 220 ELPYDHSILLENLMDPAHIPISHDRT------DWTAKREDAQPLGFEVTERTDRGFAGRW 273
++ Y + +L+ENLMD AH+P +H + RE +PL V + GF G
Sbjct: 61 DMAYGYEVLIENLMDLAHLPYAHYGIMPAPPPMKNSDRERGRPLEMVVEKLKADGFVG-- 118
Query: 274 GKEKDEPLPNFLRFEAPCVLQ--NNRELVDSKTGEK------------------HYFTGL 313
KDE L + +F APCV + ELV K F
Sbjct: 119 ---KDETLRH--KFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANKPPTEISRRTFLA- 172
Query: 314 FLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKET 373
F C P GKS LI F + + P+W FH + + + DM L + E
Sbjct: 173 FFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHVEEH--KYEE 230
Query: 374 VPT----KELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGL 429
+ T K Y+ ++ SD +V +R+W++K G G + SLP + +P L
Sbjct: 231 IGTSNWHKACYVPVK-SDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSL------SPRAL 283
Query: 430 VAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVA-AALTV 488
V RY+ HV++CK C+ KA + + SL V++ AA+ V
Sbjct: 284 V---------------------LERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGV 322
Query: 489 LAILASG---RQWKAFCLASASLCLAG 512
LA+ +G + +A A +C A
Sbjct: 323 LALTQNGVISAKVRATIFIIAIVCFAA 349
>gi|108757336|ref|YP_635237.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
xanthus DK 1622]
gi|108461216|gb|ABF86401.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus
xanthus DK 1622]
Length = 376
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 151/363 (41%), Gaps = 61/363 (16%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L+ ++ PL T+F +VL++D G+ +DRC HR A+LS G + +GR+
Sbjct: 19 WYVACLSTELKPGEPLARTLFGTGVVLFRDVQGQPTALRDRCLHRNARLSRGAVFNGRIG 78
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAK---IPRSACVRT--------------YEVKESQGV 185
C YHGW ++ G V++P L + + AC R + E G+
Sbjct: 79 CPYHGWVYDASGAVVEVPSLGPSQRSELLDADACAREGLATAPCALGRLTRFPTLEQDGL 138
Query: 186 VWVWMSQKTPPN--PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH- 242
V+V+M P P ++P+++ + G+ + P + L+EN MD H H
Sbjct: 139 VFVYMGGAEPARSAPFRVPYWD---QEGWTVYFMVTRFPNGVTNLVENFMDVPHTLFVHP 195
Query: 243 --------DRTDWTAKREDAQPL-GFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVL 293
R T +R L ++ + T G GR + PL + +F P V
Sbjct: 196 GWFRRPASKRVPATVRRTAGSVLVTYKQAQDTVTGL-GRLFNPRGLPLLHTDKFYVPNVT 254
Query: 294 QNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRF---------GATKRSPLAKLFPK 344
+ VD GE H F C P G S++ GA + L +
Sbjct: 255 R-----VDYLWGE-HGFVINSQCTPIGPTDSLVYTAISYRLPVDVPGALVGRAMMPLV-R 307
Query: 345 WYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELY----LNLRSSDTWVAEYRKWMDKV 400
WY Q V +QD+ + Q E L+ P +Y +L +D + YR+W+ +
Sbjct: 308 WYTRQ----VIQQDVVIMDIQREALLDG--PGGGVYSGTEADLHHAD--IEAYRRWLREG 359
Query: 401 GHG 403
G G
Sbjct: 360 GQG 362
>gi|83718255|ref|YP_440309.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
thailandensis E264]
gi|167617039|ref|ZP_02385670.1| Rieske [Burkholderia thailandensis Bt4]
gi|257140941|ref|ZP_05589203.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
thailandensis E264]
gi|83652080|gb|ABC36144.1| Rieske [2Fe-2S] domain protein [Burkholderia thailandensis E264]
Length = 330
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+D W P+ L++ V A L + +Q +VL++D +G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 137 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAP 128
Query: 195 PP 196
PP
Sbjct: 129 PP 130
>gi|237509499|ref|ZP_04522214.1| Rieske (2Fe-2S) domain protein [Burkholderia pseudomallei MSHR346]
gi|254299474|ref|ZP_04966923.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 406e]
gi|157809462|gb|EDO86632.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 406e]
gi|235001704|gb|EEP51128.1| Rieske (2Fe-2S) domain protein [Burkholderia pseudomallei MSHR346]
Length = 330
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+D W P+ L++ V A L + +Q +VL++D +G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 137 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAP 128
Query: 195 PP 196
PP
Sbjct: 129 PP 130
>gi|145590685|ref|YP_001152687.1| Rieske (2Fe-2S) domain-containing protein [Pyrobaculum arsenaticum
DSM 13514]
gi|145282453|gb|ABP50035.1| Rieske (2Fe-2S) domain protein [Pyrobaculum arsenaticum DSM 13514]
Length = 326
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 139/321 (43%), Gaps = 37/321 (11%)
Query: 89 TKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGW 148
+++VP P+G+ +V ++D +G + D CPHR A+LS G+++ G+++C YHG+
Sbjct: 8 SREVPRGRPIGVRRLGMDLVFWRDDSGRIHALLDDCPHRRARLSLGKVVGGKIQCPYHGF 67
Query: 149 QFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENF- 207
+F+G GK +KIP L AK+P + V ++ +VWVW P + +FE+
Sbjct: 68 EFDGSGKVIKIPALGRSAKLPEYLKAFSMPVYDAYDIVWVWYGGGEPRGAPR--FFEDLE 125
Query: 208 ARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ-PLGFEVTE--- 263
+ + S + + ++ EN +D H+P H T R PL V +
Sbjct: 126 GLEAYSEYSEVWGVSLPRAV--ENQLDVFHLPFVHYNTIGRGGRTLVHGPLVKPVDDYSF 183
Query: 264 ------RTDRGFAGRWGKEKD-EPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLC 316
+ DRG E D L N+L F P + +N + +F
Sbjct: 184 VVYPFNQVDRGQRPLRSSEIDVGKLRNYLWFIYPNLWEN---YISKNMRVVAFFA----- 235
Query: 317 RPTGQGKSMLIVRF--GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETV 374
P G + + +R T PL L K N V QD ++SQ +M++
Sbjct: 236 -PVGSVSTKIYLRLYMKVTGVKPLDALIAKLLMPFNVY-VLHQDRRVVTSQAGDIMRD-- 291
Query: 375 PTKELYLNLRSSDTWVAEYRK 395
L +D +A YR+
Sbjct: 292 -------KLIHADAPIAMYRR 305
>gi|167921537|ref|ZP_02508628.1| Rieske [Burkholderia pseudomallei BCC215]
Length = 330
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+D W P+ L++ V A L + +Q +VL++D +G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 137 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAP 128
Query: 195 PP 196
PP
Sbjct: 129 PP 130
>gi|167722287|ref|ZP_02405523.1| Rieske [Burkholderia pseudomallei DM98]
gi|254195546|ref|ZP_04901974.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei S13]
gi|169652293|gb|EDS84986.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei S13]
Length = 330
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+D W P+ L++ V A L + +Q +VL++D +G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 137 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAP 128
Query: 195 PP 196
PP
Sbjct: 129 PP 130
>gi|167584429|ref|ZP_02376817.1| Rieske (2Fe-2S) domain protein [Burkholderia ubonensis Bu]
Length = 356
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V +AP+GLT ++QIVL++D +G + +DRCPHR A+LS G + G L
Sbjct: 26 WYPVAPSWQV-SNAPVGLTRLNEQIVLWRDQDGRVHALEDRCPHRGARLSLGWNLGGNLA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G ++P + ++ + + CV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVDGSGTVNRVPAV-SNCPLEGTKCVKSYPVQEQAGAIFLWFGDDAHAEPAPLN 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVAGEYAHFLCMSNWTCNYQYAIDNVMDPMHGAYLH 183
>gi|134280663|ref|ZP_01767373.1| putative rieske iron-sulfur protein [Burkholderia pseudomallei 305]
gi|134247685|gb|EBA47769.1| putative rieske iron-sulfur protein [Burkholderia pseudomallei 305]
Length = 330
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+D W P+ L++ V A L + +Q +VL++D +G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 137 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAP 128
Query: 195 PP 196
PP
Sbjct: 129 PP 130
>gi|338740351|ref|YP_004677313.1| Rieske (2Fe-2S) domain-containing protein [Hyphomicrobium sp. MC1]
gi|337760914|emb|CCB66747.1| Rieske (2Fe-2S) domain protein [Hyphomicrobium sp. MC1]
Length = 376
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 150/337 (44%), Gaps = 34/337 (10%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+W+ + T++VP + + T+ + +V+++D N ++ ++D C HR A+LS+G + D ++
Sbjct: 48 DWHVVAFTEEVPQNKLVPTTLMGRDLVIWRDKNDQIHVWEDLCLHRGARLSKGFIKDDKV 107
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW ++G KCV +P P D + ++ + + ++ G VW + TP N +
Sbjct: 108 VCPYHGWNYDGTAKCVFMPAAPQDQPMKKAKAI-AHHAQDKYGFVWACIG--TPAN--DI 162
Query: 202 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPL-GF 259
P F + P ++ V+ P+ + +EN +D H P H + D P+ G+
Sbjct: 163 PAFPEWDDPSYKKVNC-GPYPFRSAYRAVENFIDATHFPFVHAGVNGIIDEPD--PIAGY 219
Query: 260 EVTERTDRGFAGR-------WGKEKDEPLPNFLRFEA--PCVLQNNRELVDSKTGEKHY- 309
+VTE + G A +G ++ P+ + ++ P V + +V S H
Sbjct: 220 DVTE-DENGLASTEVRVTQPYGDPRNIPVTAYYAYKCLRPLVAYFKKRVVISDPARAHLG 278
Query: 310 -----FTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSS 364
F +P + S IVR A + Q+ V++QD + +
Sbjct: 279 NDNDRFCTFLTAQPVDETHS--IVRICCAMNFTPAPTDEEVRRRQDL--VYQQDGDIVDT 334
Query: 365 QNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVG 401
Q E +P Y SD +YR W+ +G
Sbjct: 335 QR----PERIPVDLRYELHHRSDLMGQKYRSWLKNMG 367
>gi|257056591|ref|YP_003134423.1| vanillate demethylase subunit A [Saccharomonospora viridis DSM
43017]
gi|256586463|gb|ACU97596.1| vanillate demethylase subunit A [Saccharomonospora viridis DSM
43017]
Length = 377
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 132/334 (39%), Gaps = 35/334 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +V D PL TV + L+++ G D C HRLA LS+G++I L+
Sbjct: 29 WYVAAWDYEVTDKKPLARTVAGVPLALWRNTEGRAVALADACWHRLAPLSKGKIIGDELQ 88
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F G+C +PA + SA V +Y V E VWVW+ +P+ +P
Sbjct: 89 CPYHGLRFNSAGRCTA---MPAQETLNPSALVPSYPVVERYRYVWVWVGDPNLADPNTVP 145
Query: 203 WFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
P + D TIH ++ ++L+NLMD H H + +E+ F+V
Sbjct: 146 DMHQMDDPAWAGDGETIHA-DCNYQLVLDNLMDLTHEEFVHSS---SIGQEELSEADFDV 201
Query: 262 TERTDRGFAGRWGKEKDEP----------LPNF---------LRFEAPCVLQNNRELVDS 302
+ RW D P P F ++FEAP ++ + + +
Sbjct: 202 VHEGNTVTVTRWMLNVDAPPFWLRNMRDKFPGFEGKVDRWQIIKFEAPSTIRIDVGVAKA 261
Query: 303 KTG-----EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQ 357
TG G + T + + + L Q+ S VF +
Sbjct: 262 GTGAPEGDRSQGVNGYVMNTITPETDRSCHYFWAFMRNYRLDSQTITTRLRQSVSGVFAE 321
Query: 358 DMGFLSSQNEVLMKETVPTKELY-LNLRSSDTWV 390
D L +Q + + P + Y LN+ WV
Sbjct: 322 DEDMLRAQQRAI--DANPDHQFYSLNIDIGGMWV 353
>gi|379718706|ref|YP_005310837.1| Rieske domain-containing protein [Paenibacillus mucilaginosus 3016]
gi|378567378|gb|AFC27688.1| Rieske domain-containing protein [Paenibacillus mucilaginosus 3016]
Length = 332
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 148/330 (44%), Gaps = 28/330 (8%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
EW+P+ + ++ +D PL +TV +++ +++ G + +D C HR A LS+G + L
Sbjct: 15 EWHPVCIAGEL-NDKPLSVTVLGERVAVFRTKRG-VHALRDLCVHRGAMLSKGWVEGETL 72
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW++EG G CV IP + KIP A Y E G+VWV + + + P PD
Sbjct: 73 VCPYHGWKYEGNGACVCIPAQSKEDKIPARARAEQYRCMEKYGLVWVCIGEPSAPLPD-- 130
Query: 202 PWFENFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
FE F PG++ + +++ + ++EN D AH+ H + A+ F+
Sbjct: 131 --FEEFENPGYRPLPCGPYQVKAAGTRVIENFTDFAHLMFVHG--GLLGHPDYAELPDFK 186
Query: 261 VTERTDRGFAG---------RWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFT 311
V + R + G G E E E L D+ TG+ +
Sbjct: 187 VYKEKGRVYTGDVPIFQPVAHSGSEAKEGTTYVYVKEVFRPLAARLSKRDAATGQTLWI- 245
Query: 312 GLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMK 371
L P + + + + A R+ + + F + + VFEQD+ + +Q L+
Sbjct: 246 -LLTVLPVTEKECTV---YMAVSRNYGFDVDDR-QFIEFQNTVFEQDVWIIETQKPELLP 300
Query: 372 ETVPTKELYLNLRSSDTWVAEYRKWMDKVG 401
+ + LN +D YR+W+ ++G
Sbjct: 301 LDLQAE---LN-HKADVLSVAYRRWLIELG 326
>gi|365847880|ref|ZP_09388362.1| rieske [2Fe-2S] domain protein [Yokenella regensburgei ATCC 43003]
gi|364571736|gb|EHM49313.1| rieske [2Fe-2S] domain protein [Yokenella regensburgei ATCC 43003]
Length = 340
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGLEVAGSG---EVKDVPAVDRCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + E A + ++ LEN+MDP H H
Sbjct: 133 LSFPEELADSETYSHFLCTAAWQCNYQYALENVMDPMHGTYLH 175
>gi|383452944|ref|YP_005366933.1| Rieske family iron-sulfur cluster-binding protein [Corallococcus
coralloides DSM 2259]
gi|380734627|gb|AFE10629.1| Rieske family iron-sulfur cluster-binding protein [Corallococcus
coralloides DSM 2259]
Length = 363
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 22/241 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+ L ++++ D PL T+ +VL++ G+ DRCPHR LS G++ +G+LE
Sbjct: 26 WFILCTSREL-GDRPLARTLQGTPLVLFRGEGGKPGALMDRCPHRNVPLSLGRVTNGQLE 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 200
C YHGW+F+ G+C IP L + + RS C +Y +E G VWV+ + P P +
Sbjct: 85 CGYHGWRFDTGGQCRLIPGLVGEPEA-RSRCAASYATREQDGFVWVYSTPGVEPTSEPFR 143
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH----------DRTDWTAK 250
P + + V + P +LEN +D H H + D +
Sbjct: 144 FPLLDA---ADYTTVRRVLRAPGSLHAVLENTLDVPHTAFLHGGLFRTAEKKNEIDVVVR 200
Query: 251 REDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYF 310
R + + E +G GR + +F RF P + Q V+ + GEK +
Sbjct: 201 RSADRVEAEYLGEPAPKGLVGRLLAPGGGVVQHFDRFLMPSIAQ-----VEYRIGEKSHI 255
Query: 311 T 311
Sbjct: 256 V 256
>gi|195984490|gb|ACG63835.1| SxtDIOX [Lyngbya wollei]
Length = 334
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 153/349 (43%), Gaps = 46/349 (13%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK--DGNGELRCYQDRCPHRLAKLS 132
AD WY + +D + + ++VL++ + N ++ +QD CPHR LS
Sbjct: 4 ADLILINNWYVVAKVEDCRPGSITTAHLLGVKLVLWRSHEQNSPIQVWQDYCPHRGVPLS 63
Query: 133 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ 192
G++ + L C YHGW++ GKCV+IP P D P SA +TY +E G+VWV +
Sbjct: 64 MGEVANNTLVCPYHGWRYNQAGKCVQIPAHP-DMVPPASAQAKTYHCQERYGLVWVCLG- 121
Query: 193 KTPPNP-DKLPWFENFARPGFQDVST----IHELPYDHSILLENLMDPAHIPISHDRTDW 247
NP + +P F + P + T I P+ +++N +D +H P H+
Sbjct: 122 ----NPVNDIPSFPEWDDPNYHKTYTKSYLIQASPFR---VMDNSIDVSHFPFIHEGI-- 172
Query: 248 TAKREDAQPLGFEVTERTDRGFAGRW--------GKEKDEPLPNFLRFEAPCVLQNNREL 299
R A+ EV D G++ KD+ + N+ R P + E
Sbjct: 173 LGDRNHAEVEDLEVKVDKDGLTMGKYQVHTSKFNNSTKDDSMVNWFRLSHPLCQYCSTEA 232
Query: 300 VDSKTGEKHYFTGLFLCRPTGQGKSML--IVRFGATKRSPLAKLFPKWYFHQNASKVFEQ 357
+ +T L + P + S+L ++ + +K + +K+ + +V E+
Sbjct: 233 SEMRT------VDLMVVTPIDEDNSVLRYLIMWNGSK-TLESKILADY------DQVIEE 279
Query: 358 DMGFLSSQN----EVLMKETVPTKELYLNLR-SSDTWVAEYRKWMDKVG 401
D+ L SQ +L + + T+ L + SD YR+W+ ++G
Sbjct: 280 DIRILHSQQPTRLPLLSPKQINTQGLPQEIHVPSDRCTVAYRRWLKELG 328
>gi|434391889|ref|YP_007126836.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
gi|428263730|gb|AFZ29676.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
Length = 349
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 134/325 (41%), Gaps = 27/325 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + A + T+ + IV + G++ + CPHR LS G+ +E
Sbjct: 11 WYYALPGGSLKRGAMVAKTLLGEPIVFARSREGKVFALCNICPHRAVPLSCGRFDGQEIE 70
Query: 143 CLYHGWQFEGEGKCVKIPQL-PADAKIPRSACVRTYEVKESQGVVWVWMS---QKTPPNP 198
C YHGW+F+ G+C +IP L D+ + V+ Y V+E QG +W++M+ +K PP
Sbjct: 71 CCYHGWRFDQTGRCTEIPALVEGDSLDLKRFQVKQYPVREVQGNIWIYMASNERKAPPAT 130
Query: 199 D-KLPWFENFARPGFQDVSTIHELPY-DHSILLENLMDPAHIPISHDRTDWTAKRE---- 252
D ++P F +Q V T+H Y DH+I+ LMDPAHI H W + R
Sbjct: 131 DMEVPVVPFFGDKSYQLVVTLHFPCYVDHAII--GLMDPAHISFVHRSWWWKSGRSLFEE 188
Query: 253 ----DAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH 308
D P GF + A + + F P V ++ + E H
Sbjct: 189 VKAFDPSPYGFTMRRHKIPNVALGYRLIGGGAPETEIAFRLPGV------RIEHVSTEHH 242
Query: 309 YFTGLFLCRPTGQGKSMLIVRF-----GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLS 363
L P + ++ + T PL K F + + Q+ V +Q G
Sbjct: 243 NVCNLTAVTPLSETETEVTTLLYWTTPWITAIKPLIKPFVRAFLDQDRQVVIKQQEGLKY 302
Query: 364 SQNEVLMKETVPTKELYLNLRSSDT 388
+L+++ Y L++ T
Sbjct: 303 DPTLLLIRDADTQARWYYQLKAEFT 327
>gi|15644093|ref|NP_229142.1| oxidase-related protein [Thermotoga maritima MSB8]
gi|4981900|gb|AAD36412.1|AE001788_7 oxidase-related protein [Thermotoga maritima MSB8]
Length = 321
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 152/345 (44%), Gaps = 46/345 (13%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+ + + +V P+G+ + +V ++D G++ +D C HR A+LS G++I+ R++
Sbjct: 2 WFAVLSSNEV-RRKPVGVRRLGRDLVFWRDSLGKVYALEDFCVHRRARLSAGKVINDRIQ 60
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C +HG++++G G+ IP L + K+P V +Y V E ++W+W + P+K P
Sbjct: 61 CPFHGFEYDGNGRVRLIPALGKNYKVPDRFRVNSYPVYEKNNIIWLWSGEG---EPEKEP 117
Query: 203 WF-----ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKRE----- 252
F E+FA F+++ + P+ ++ EN +D H+P H T R
Sbjct: 118 KFFDDIDEDFAYAEFRELWNV---PFPRAV--ENQLDVMHLPFVHRTTIGRGNRTLVHGP 172
Query: 253 -----DAQPLGFEVTERTDRGFAGRWGKE-KDEPLPNFLRFEAPCVLQNNRELVDSKTGE 306
D F V DRG + +E E +L F P + QN+ + T
Sbjct: 173 VVKWIDEDSFIFYVFNEVDRGQRVKRPEELSGEESRVYLEFIFPNLWQNH---ISEGTRV 229
Query: 307 KHYFTGLFLCRPTGQGKSMLIVRF--GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSS 364
+F P + K+M+ +RF T P+ + + N + QD + +
Sbjct: 230 VAFFV------PVDRQKTMIYLRFYVKMTGLKPVDSIIARLSMPLNRI-ILHQDRRVVET 282
Query: 365 QNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFG 409
Q + K+ L D + E+RK + K + + FG
Sbjct: 283 QERDIRKDV---------LVQGDLPIMEFRKRLYKEKKLIDFLFG 318
>gi|149920026|ref|ZP_01908500.1| iron-sulfur cluster-binding protein, Rieske family [Plesiocystis
pacifica SIR-1]
gi|149819123|gb|EDM78559.1| iron-sulfur cluster-binding protein, Rieske family [Plesiocystis
pacifica SIR-1]
Length = 331
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 5/162 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ ++ V P+ L +VL+++ EL C +DRCPHR LS G + GRL
Sbjct: 6 WYPILFSRRV-RQRPVALRRGGVDLVLFRNARRELVCLRDRCPHRGVPLSLGFVRAGRLV 64
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG++F+ G CV++P DA+IP C + V+E G+VW++ +LP
Sbjct: 65 CGYHGFEFDDAGACVRMPCEGPDARIPAGMCTDRFPVRERDGIVWMFWGADGLAEATELP 124
Query: 203 WFENFARPGFQDVSTIHEL--PYDHSILLENLMDPAHIPISH 242
+ A G+ S EL P + LEN D H H
Sbjct: 125 YLR--ATVGYAGTSHDSELEWPLSFTNSLENNFDIHHFNYVH 164
>gi|167894084|ref|ZP_02481486.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 7894]
Length = 124
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 63/111 (56%), Gaps = 2/111 (1%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D T W PL L++ V APL + Q IVL++D G +R +DRC HR A LS G++
Sbjct: 10 DSTARWLPLALSEQVSGKAPLAVMCMGQAIVLFRDAAGAVRAMEDRCAHRRAPLSLGRVT 69
Query: 138 -DGRLECLYHGWQFEG-EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVV 186
+GRL+C YHGW ++G G CV IP L ++P R YE E G V
Sbjct: 70 PEGRLQCGYHGWTYDGASGTCVAIPNLSPHERVPAHYAARAYETLERDGYV 120
>gi|434395181|ref|YP_007130128.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
gi|428267022|gb|AFZ32968.1| Rieske (2Fe-2S) iron-sulfur domain protein [Gloeocapsa sp. PCC
7428]
Length = 369
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + + + ++ Q I +Y+D NG+L +D CPH+ L +G++ L
Sbjct: 26 WYAVSWANQLKPGDIIPVVIWQQAIAVYRDINGQLHALEDFCPHKGVALHKGKVHGCNLA 85
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F+ EG CVKIP LP K+PR A VR+Y ++E ++W++ + +LP
Sbjct: 86 CAYHGWEFDSEGSCVKIPYLPEKQKLPR-ASVRSYPIQEKYNLIWIFPGEPHLAATCQLP 144
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 237
F + V SI EN MD H
Sbjct: 145 HIPEFFETEWLVVPISAHFQAHFSICNENTMDVFH 179
>gi|359478791|ref|XP_003632170.1| PREDICTED: LOW QUALITY PROTEIN: protochlorophyllide-dependent
translocon component 52, chloroplastic-like [Vitis
vinifera]
Length = 474
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 159/444 (35%), Gaps = 73/444 (16%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCPHRLAKLSEGQ 135
+DW +WYP+ D+ P V + ++ D N E + + D C H LA LSEG
Sbjct: 56 FDWFSQWYPVASVCDLDKRKPHAKRVMGFDVAVWWDRNESEWKVFDDSCAHGLAPLSEG- 114
Query: 136 LID--GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKESQGVVWVWM 190
+ID G+L+C+YHG F G G C IPQ P D + A Y G+VW W
Sbjct: 115 MIDQWGQLQCVYHGQCFNGSGDCKFIPQAPPDGPPVHTFKKARAAVYPSAVQNGIVWFW- 173
Query: 191 SQKTPPNPD----------KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDP--AHI 238
PN D K P+ P + P+ + +L+EN+MD AH
Sbjct: 174 -----PNTDSQFKDILTKKKPPYIPELDDPSYTKSMGARYFPFRYEVLMENIMDLAYAHY 228
Query: 239 PISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCV----LQ 294
I + P+ V GF + + +P L + C+ Q
Sbjct: 229 RIMQIPQANRXIEKGGTPIEISVMRIAIDGFVAERELARSKFIPPCLCYT--CLGFPAYQ 286
Query: 295 NNRELVDSKTGEKHYFTGLFL-CRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASK 353
+N + T E L L C P G S LI + P W H +
Sbjct: 287 SNGSVSSDLTKEVTIRALLILICVPVSPGNSRLIWTSPRNFGPWTDCMVPXWMLHMRQNL 346
Query: 354 VFEQDMGFLSSQNEVLMKETVPT--KELYLNLRSSDTWVAEYRKWMDKVGHGMPYHFGHS 411
+ + + + LMK + K ++ + SD + +R W+ K HS
Sbjct: 347 ILDSAIYLPHVEEYKLMKAGLSNWQKACFMPTK-SDAHIIAFRAWLRK----------HS 395
Query: 412 TISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLANRYFRHVIHCKGCSSVIKA 471
LP P L +R + HV++C C + K
Sbjct: 396 AGXLPPTPP---------------------------REQLMDRXWSHVVNCSSCXAY-KG 427
Query: 472 FSTWKNSLSVVAAALTVLAILASG 495
+ L + + AL + + G
Sbjct: 428 LHVLEVVLQIFSIALIRIPAINHG 451
>gi|330820227|ref|YP_004349089.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
gladioli BSR3]
gi|327372222|gb|AEA63577.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
gladioli BSR3]
Length = 369
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V AP+GLT +QIVL++D G + +DRCPHR A+LS G + +
Sbjct: 29 WYPVAPSWQV-SSAPVGLTRLSEQIVLWRDREGRVHALEDRCPHRGARLSLGWNLGDHVA 87
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G ++P + A+ + ACV++Y V+E G +++W + P L
Sbjct: 88 CWYHGIEVDGSGTVARVPAV-ANCPLEGQACVKSYPVEERAGAIFLWFGDEAHREPAPLV 146
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + + ++ ++N+MDP H H
Sbjct: 147 LPEELSSDAYAHFVCVSNWTCNYQYAIDNVMDPMHGAYLH 186
>gi|421172490|ref|ZP_15630260.1| vanillate monooxygenase [Pseudomonas aeruginosa CI27]
gi|404537756|gb|EKA47339.1| vanillate monooxygenase [Pseudomonas aeruginosa CI27]
Length = 361
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 88/165 (53%), Gaps = 5/165 (3%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WY L+ ++ D P+G T+ ++ +VL++ G+G++ +DRC HR LS G L + +
Sbjct: 30 QWYVAALSWEL-KDKPVGRTLLNKPVVLFRMGDGQVAALEDRCCHRALPLSNGTLEEAGV 88
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-K 200
C YHG F GKCV+I P KIP A V Y V+E +VW+W PD +
Sbjct: 89 RCGYHGLLFNQAGKCVEI---PGQDKIPSKAKVPAYHVRERDQIVWIWFGADAASEPDCE 145
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
P +E + + +++ + ++ +NLMD +H+ H +T
Sbjct: 146 PPAYEVHSSGKYVFDGSVYHYDAPYQLIHDNLMDLSHLGYVHLKT 190
>gi|124382372|ref|YP_001025916.1| (Fe-S)-binding protein [Burkholderia mallei NCTC 10229]
gi|126446785|ref|YP_001078004.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia mallei NCTC
10247]
gi|166999829|ref|ZP_02265659.1| Rieske (2Fe-2S) domain protein [Burkholderia mallei PRL-20]
gi|238562555|ref|ZP_04610116.1| Rieske (2Fe-2S) domain protein [Burkholderia mallei GB8 horse 4]
gi|254176289|ref|ZP_04882947.1| rieske (2Fe-2S) domain protein [Burkholderia mallei ATCC 10399]
gi|254200942|ref|ZP_04907307.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|254204904|ref|ZP_04911257.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|254359023|ref|ZP_04975295.1| rieske (2Fe-2S) domain protein [Burkholderia mallei 2002721280]
gi|126239639|gb|ABO02751.1| Rieske [2Fe-2S] domain protein [Burkholderia mallei NCTC 10247]
gi|147748554|gb|EDK55629.1| conserved hypothetical protein [Burkholderia mallei FMH]
gi|147754490|gb|EDK61554.1| conserved hypothetical protein [Burkholderia mallei JHU]
gi|148028210|gb|EDK86170.1| rieske (2Fe-2S) domain protein [Burkholderia mallei 2002721280]
gi|160697331|gb|EDP87301.1| rieske (2Fe-2S) domain protein [Burkholderia mallei ATCC 10399]
gi|238522321|gb|EEP85766.1| Rieske (2Fe-2S) domain protein [Burkholderia mallei GB8 horse 4]
gi|243064141|gb|EES46327.1| Rieske (2Fe-2S) domain protein [Burkholderia mallei PRL-20]
gi|261826768|gb|ABM99526.2| Rieske [2Fe-2S] domain protein [Burkholderia mallei NCTC 10229]
Length = 330
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 2/122 (1%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+D W P+ L++ V A L + +Q +VL++D +G + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRV 68
Query: 137 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHGYKTLERDGFIWACARDAP 128
Query: 195 PP 196
PP
Sbjct: 129 PP 130
>gi|113866094|ref|YP_724583.1| hypothetical protein H16_A0063 [Ralstonia eutropha H16]
gi|113524870|emb|CAJ91215.1| conserved hypothetical protein [Ralstonia eutropha H16]
Length = 346
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+W+P+ + D P +F + +VL+++ +G + DRCPHR A + G + DG L
Sbjct: 22 QWHPVLAIEQADGDGPFAARLFGRALVLWRNADG-WHAWDDRCPHRGAAFTLGAVHDGLL 80
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW+F G+C + P P PR AC T+ V+E G++WV + +L
Sbjct: 81 HCGYHGWRFASGGRCTRYPAHPELVPAPR-ACATTHAVREGYGLLWVRLGGDGTEAVPEL 139
Query: 202 PWFENFARPGFQDVSTIHEL--PYDHSI----LLENLMDPAHIPISHD 243
P F P + D + PYD + L+EN +D AH HD
Sbjct: 140 PSF-----PEYHDAECRRVVCGPYDVATSAPRLVENFLDMAHFGYVHD 182
>gi|399076261|ref|ZP_10751914.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter sp. AP07]
gi|398037594|gb|EJL30779.1| Rieske (2Fe-2S) domain-containing protein [Caulobacter sp. AP07]
Length = 353
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 97/191 (50%), Gaps = 17/191 (8%)
Query: 60 VGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRC 119
V P S+E R G+ V W+P+ +D+ + APL + + D +VLY+ +G +
Sbjct: 12 VRPTSSEIRPGDWAV----LARFWHPVAKAEDLAE-APLAVKLLDVDLVLYRAQDG-VTA 65
Query: 120 YQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEV 179
D CPHR +LS G + DG + C +HG F+G G+CV +P L AK+P S V T+
Sbjct: 66 ALDMCPHRWIRLSAGTVTDGNIVCPFHGLAFDGTGQCVHVPALGRTAKLPASYRVATFRT 125
Query: 180 KESQGVVWVWMSQKTPPNPDKLPWFE-----NFARPGFQDVSTIHELPYDHSILLENLMD 234
G++WV + + + LP FE + + GF +V P + +EN D
Sbjct: 126 AIKYGMIWVCLDDDS---QEPLPTFEALEGYDISALGFGNVCL---WPMSAARQIENFFD 179
Query: 235 PAHIPISHDRT 245
AH+P+ H T
Sbjct: 180 LAHLPLIHATT 190
>gi|167723244|ref|ZP_02406480.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei DM98]
Length = 334
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V AP+G+T +QIVL++D G + +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGITRLSEQIVLWRDREGNVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G G K+P + ++ + ACV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQACVKSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ P + + ++ ++N+MDP H H
Sbjct: 144 LPDELVAPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH 183
>gi|53721920|ref|YP_110905.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
pseudomallei K96243]
gi|167819390|ref|ZP_02451070.1| Rieske [Burkholderia pseudomallei 91]
gi|167897836|ref|ZP_02485238.1| Rieske [Burkholderia pseudomallei 7894]
gi|167922401|ref|ZP_02509492.1| Rieske [Burkholderia pseudomallei BCC215]
gi|418395960|ref|ZP_12969861.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 354a]
gi|418555670|ref|ZP_13120359.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 354e]
gi|52212334|emb|CAH38358.1| Rieske [2Fe-2S] domain protein [Burkholderia pseudomallei K96243]
gi|385368180|gb|EIF73640.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 354e]
gi|385373241|gb|EIF78298.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 354a]
Length = 355
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V AP+G+T +QIVL++D G + +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGITRLSEQIVLWRDREGNVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G G K+P + ++ + ACV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQACVKSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ P + + ++ ++N+MDP H H
Sbjct: 144 LPDELVAPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH 183
>gi|262042582|ref|ZP_06015738.1| Rieske family iron-sulfur cluster-binding protein [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
gi|259040016|gb|EEW41131.1| Rieske family iron-sulfur cluster-binding protein [Klebsiella
pneumoniae subsp. rhinoscleromatis ATCC 13884]
Length = 340
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA + P CVR+Y V E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYSVHEAHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + E A + + ++ LEN+MDP H H
Sbjct: 133 LSFPEELADSEKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|152971888|ref|YP_001336997.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|329998559|ref|ZP_08303156.1| rieske [2Fe-2S] domain protein [Klebsiella sp. MS 92-3]
gi|365140429|ref|ZP_09346484.1| hypothetical protein HMPREF1024_02515 [Klebsiella sp. 4_1_44FAA]
gi|378980596|ref|YP_005228737.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae HS11286]
gi|419974929|ref|ZP_14490344.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|419978997|ref|ZP_14494291.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|419985937|ref|ZP_14501074.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|419990762|ref|ZP_14505732.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|419996397|ref|ZP_14511199.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|420002271|ref|ZP_14516923.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|420008289|ref|ZP_14522779.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|420014367|ref|ZP_14528674.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|420019566|ref|ZP_14533758.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|420025388|ref|ZP_14539397.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|420030961|ref|ZP_14544785.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|420036671|ref|ZP_14550330.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|420042764|ref|ZP_14556256.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|420048464|ref|ZP_14561777.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|420054228|ref|ZP_14567402.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|420059729|ref|ZP_14572734.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|420065501|ref|ZP_14578306.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|420073361|ref|ZP_14585988.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|420079818|ref|ZP_14592257.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|420084063|ref|ZP_14596331.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|421912645|ref|ZP_16342360.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|421917681|ref|ZP_16347230.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|424931838|ref|ZP_18350210.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|428151582|ref|ZP_18999296.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|428937985|ref|ZP_19011118.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
VA360]
gi|449049930|ref|ZP_21731526.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
hvKP1]
gi|150956737|gb|ABR78767.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|328538630|gb|EGF64729.1| rieske [2Fe-2S] domain protein [Klebsiella sp. MS 92-3]
gi|363653745|gb|EHL92694.1| hypothetical protein HMPREF1024_02515 [Klebsiella sp. 4_1_44FAA]
gi|364520007|gb|AEW63135.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae HS11286]
gi|397344414|gb|EJJ37548.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH1]
gi|397349817|gb|EJJ42909.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH4]
gi|397350575|gb|EJJ43663.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH2]
gi|397365086|gb|EJJ57712.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH6]
gi|397366006|gb|EJJ58626.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH5]
gi|397371107|gb|EJJ63650.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH7]
gi|397378468|gb|EJJ70680.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH9]
gi|397383342|gb|EJJ75483.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH8]
gi|397388779|gb|EJJ80738.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KPNIH10]
gi|397397392|gb|EJJ89068.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH11]
gi|397401194|gb|EJJ92826.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH12]
gi|397406497|gb|EJJ97917.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH14]
gi|397415003|gb|EJK06194.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH17]
gi|397415811|gb|EJK06991.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH16]
gi|397423046|gb|EJK13987.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH18]
gi|397431373|gb|EJK22049.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH20]
gi|397435070|gb|EJK25696.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH19]
gi|397437999|gb|EJK28529.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH21]
gi|397443294|gb|EJK33620.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH22]
gi|397450553|gb|EJK40655.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
subsp. pneumoniae KPNIH23]
gi|407806025|gb|EKF77276.1| 3-phenylpropionate dioxygenase, alpha subunit [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|410113624|emb|CCM84985.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K26BO]
gi|410119966|emb|CCM89855.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST258-K28BO]
gi|426306406|gb|EKV68509.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
VA360]
gi|427538456|emb|CCM95434.1| Vanillate O-demethylase oxygenase subunit [Klebsiella pneumoniae
subsp. pneumoniae ST512-K30BO]
gi|448876673|gb|EMB11656.1| 3-phenylpropionate dioxygenase subunit alpha [Klebsiella pneumoniae
hvKP1]
Length = 340
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 88/163 (53%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA + P CVR+Y V E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYSVHEAHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + E A + + ++ LEN+MDP H H
Sbjct: 133 LSFPEELADSEKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|154249242|ref|YP_001410067.1| Rieske (2Fe-2S) domain-containing protein [Fervidobacterium nodosum
Rt17-B1]
gi|154153178|gb|ABS60410.1| Rieske (2Fe-2S) domain protein [Fervidobacterium nodosum Rt17-B1]
Length = 324
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 146/337 (43%), Gaps = 48/337 (14%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG-- 139
+WY + +K+V +G+T F +++ L++D G++ C D C HR A +S G+++
Sbjct: 5 QWYIVLSSKEVKKGELIGVTRFGEKLALWRDEAGKVHCISDVCCHRGASISHGKILSNGE 64
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 199
R+ C +HG++++ G+ IP + + + V+ Y E +W+W P NP
Sbjct: 65 RVMCPFHGFEYDSTGRVCVIPANGRNTPVNENFKVKAYHTYELADFIWIWYGDGEPTNPP 124
Query: 200 KLPWFE----NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ 255
+FE + + F++V +H +S +EN +D H+P H T R
Sbjct: 125 T--YFEDITDDLSYSEFKEVWNVH-----YSRAIENQLDVVHVPFVHYNTIGRGNRTVVD 177
Query: 256 P----------LGFEVTERTDRGFAGRWGKEK--DEPLPNFLRFEAPCVLQNNRELVDSK 303
F V R D G R +E +E +L F+ P + QN+
Sbjct: 178 GPIVKWFGDTMFYFYVFNRVDDGRPARKPEEIGLNEKSQVYLEFKFPNMWQNH------- 230
Query: 304 TGEKHYFTGLFLCRPTGQGKSMLIVRF--GATKRSPLAKLFPKWYFHQNASKVFEQDMGF 361
EK T F+ P +M+ +RF G TK L KL N K+ QD
Sbjct: 231 IDEKIRVTAAFV--PIDDEHTMIYLRFYIGFTKIRFLDKLITLMGMPFN-RKILHQDKRV 287
Query: 362 LSSQNEVLMKETVPTK-ELYL--NLRSSDTWVAEYRK 395
+ +Q +P K EL + NL D + EYRK
Sbjct: 288 VETQ--------IPKKSELRMGENLIPGDAPILEYRK 316
>gi|427739261|ref|YP_007058805.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
gi|427374302|gb|AFY58258.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
Length = 374
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 5/183 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP ++ L + +++ I LY+ +G++ +D CPH+ L +G++ L
Sbjct: 26 WYPATWASELKPSQVLPVVIWNSAIALYRSQDGQVHAIEDACPHKGVALHKGKVTGENLA 85
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F G G C IP P D K+P A R+Y V+E +VW++ +LP
Sbjct: 86 CPYHGWEFNGNGICTNIPYFPKDQKLP-CAKARSYAVREKYNIVWIFPGAVEDSEKVELP 144
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
+ P + + E SI EN MD H + + W D Q L + +
Sbjct: 145 SVPEYDDPNWLAIPIPGEFKAHFSICNENTMDVFHGYLHENLQGWF----DPQLLSLKAS 200
Query: 263 ERT 265
E +
Sbjct: 201 EES 203
>gi|53717145|ref|YP_105952.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
mallei ATCC 23344]
gi|67643274|ref|ZP_00442021.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei GB8 horse 4]
gi|76819609|ref|YP_337644.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1710b]
gi|121598013|ref|YP_989930.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
mallei SAVP1]
gi|126442454|ref|YP_001062304.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 668]
gi|126456066|ref|YP_001075269.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1106a]
gi|134279414|ref|ZP_01766127.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 305]
gi|167000183|ref|ZP_02266003.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei PRL-20]
gi|167742215|ref|ZP_02414989.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 14]
gi|167827763|ref|ZP_02459234.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 9]
gi|167849237|ref|ZP_02474745.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei B7210]
gi|167906179|ref|ZP_02493384.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei NCTC 13177]
gi|167914502|ref|ZP_02501593.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 112]
gi|217418682|ref|ZP_03450189.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 576]
gi|226197753|ref|ZP_03793328.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pakistan 9]
gi|237510278|ref|ZP_04522993.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei MSHR346]
gi|242311560|ref|ZP_04810577.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106b]
gi|254174319|ref|ZP_04880981.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei ATCC 10399]
gi|254189984|ref|ZP_04896493.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pasteur 52237]
gi|254193004|ref|ZP_04899439.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei S13]
gi|254200795|ref|ZP_04907160.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei FMH]
gi|254204766|ref|ZP_04911119.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei JHU]
gi|254264054|ref|ZP_04954919.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1710a]
gi|254300250|ref|ZP_04967696.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 406e]
gi|386864685|ref|YP_006277633.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1026b]
gi|403522532|ref|YP_006658101.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei BPC006]
gi|418535817|ref|ZP_13101553.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1026a]
gi|418543448|ref|ZP_13108804.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1258a]
gi|418549984|ref|ZP_13114991.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1258b]
gi|52423115|gb|AAU46685.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
mallei ATCC 23344]
gi|76584082|gb|ABA53556.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
pseudomallei 1710b]
gi|121225811|gb|ABM49342.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei SAVP1]
gi|126221945|gb|ABN85450.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 668]
gi|126229834|gb|ABN93247.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106a]
gi|134249833|gb|EBA49914.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 305]
gi|147748407|gb|EDK55482.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei FMH]
gi|147754352|gb|EDK61416.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei JHU]
gi|157809865|gb|EDO87035.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 406e]
gi|157937661|gb|EDO93331.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pasteur 52237]
gi|160695365|gb|EDP85335.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei ATCC 10399]
gi|169649758|gb|EDS82451.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei S13]
gi|217397986|gb|EEC38001.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 576]
gi|225930362|gb|EEH26374.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei Pakistan 9]
gi|235002483|gb|EEP51907.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei MSHR346]
gi|238524583|gb|EEP88015.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei GB8 horse 4]
gi|242134799|gb|EES21202.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1106b]
gi|243063833|gb|EES46019.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei PRL-20]
gi|254215056|gb|EET04441.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1710a]
gi|385352776|gb|EIF59167.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1258a]
gi|385353105|gb|EIF59471.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1258b]
gi|385354415|gb|EIF60684.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1026a]
gi|385661813|gb|AFI69235.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei 1026b]
gi|403077599|gb|AFR19178.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
pseudomallei BPC006]
Length = 355
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V AP+G+T +QIVL++D G + +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGITRLSEQIVLWRDREGNVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G G K+P + ++ + ACV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQACVKSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ P + + ++ ++N+MDP H H
Sbjct: 144 LPDELVAPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH 183
>gi|37962890|gb|AAR05799.1| lethal leaf-spot 1 [Zea mays]
Length = 197
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 85/147 (57%), Gaps = 11/147 (7%)
Query: 50 TSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVL 109
TS G+ P+++ GE+ + W + WYP+ L +D+ P + ++ +V+
Sbjct: 44 TSVPGEAAEQAEPSTSAPESGEK----FSWRDHWYPVSLVEDLDPSRPTPFQLLNRDLVI 99
Query: 110 YKD-GNGELRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQ-LP--A 164
+K+ +GE DRCPHRLA LSEG++ + G L+C YHGW F+G G C KIPQ +P
Sbjct: 100 WKEPKSGEWVALDDRCPHRLAPLSEGRIDETGCLQCSYHGWSFDGSGACTKIPQAMPEGP 159
Query: 165 DAKIPRS--ACVRTYEVKESQGVVWVW 189
+A+ RS AC + SQG+++VW
Sbjct: 160 EARAVRSPKACAIKFPTLVSQGLLFVW 186
>gi|319782309|ref|YP_004141785.1| Rieske (2Fe-2S) iron-sulfur domain [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317168197|gb|ADV11735.1| Rieske (2Fe-2S) iron-sulfur domain [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 346
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 14/229 (6%)
Query: 102 VFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQ 161
+ + IVLY+ +G + +D CPHR LS G++ +EC YHG F+ G C ++
Sbjct: 25 ILGEDIVLYRRTDGVVAALEDACPHRKLPLSMGRIKGDTVECGYHGLTFDSTGTCTRV-- 82
Query: 162 LPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTIHE 220
P KIP ACVR+Y + E G++W+WM + +P + +++ P + +
Sbjct: 83 -PGAEKIPHVACVRSYPIAERYGLLWIWMGEAAKADPALIFAVDHWGDPAWGVNRGESMA 141
Query: 221 LPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEP 280
L ++ + +NL+DP+H+ H + + + PL E T D RW + P
Sbjct: 142 LDCNYLYMTDNLLDPSHVSWVHQSSFGGVQAMEDAPL--ETTVGADGVTVWRWVVDA-AP 198
Query: 281 LP---NFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFL-CRPTGQGKSM 325
P FL+F C + + E+ + +F+ R G+GK +
Sbjct: 199 APFYAPFLKFSGNCDRKQHYEV---RYPSNAIIKAIFVPARTGGEGKPL 244
>gi|228952851|ref|ZP_04114920.1| hypothetical protein bthur0006_22450 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|423424649|ref|ZP_17401680.1| hypothetical protein IE5_02338 [Bacillus cereus BAG3X2-2]
gi|423504089|ref|ZP_17480681.1| hypothetical protein IG1_01655 [Bacillus cereus HD73]
gi|449090153|ref|YP_007422594.1| hypothetical protein HD73_3495 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228806807|gb|EEM53357.1| hypothetical protein bthur0006_22450 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|401113421|gb|EJQ21290.1| hypothetical protein IE5_02338 [Bacillus cereus BAG3X2-2]
gi|402457667|gb|EJV89428.1| hypothetical protein IG1_01655 [Bacillus cereus HD73]
gi|449023910|gb|AGE79073.1| hypothetical protein HD73_3495 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 322
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 28/224 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + KD+ P+ V + VLY+D E++ CPHR A LS GQ+++G+L
Sbjct: 13 WYAVSYAKDI-KKIPVKKRVAGKDFVLYRDEKDEVQALSPYCPHRGADLSLGQVVNGKLV 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-MSQKTPPNPDKL 201
C YHGW+F+ G CV+IP P + IP+ A +Y VKE G++W++ +++TPP
Sbjct: 72 CPYHGWEFDSCGTCVRIPSQP-NKPIPKFAHTLSYPVKEKIGLIWIYPDNEETPPEWQTF 130
Query: 202 PWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
EN F F H + +E+++D AH+ H +T ++ A+ +
Sbjct: 131 HVMENTPFKLSFFHATWNAHL-----TRSIESVLDIAHLAYVHKKT--IGRKTKAESTNY 183
Query: 260 EVTERTDR------------GFAGRW----GKEKDEPLPNFLRF 287
++ D+ F +W GK+++E ++ F
Sbjct: 184 KLEGTLDQFIFSNGDAYLEYKFPHQWMLHSGKQENESFIQYITF 227
>gi|125588313|gb|EAZ28977.1| hypothetical protein OsJ_13021 [Oryza sativa Japonica Group]
Length = 435
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 154/425 (36%), Gaps = 103/425 (24%)
Query: 139 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
RL L H WQ K ACV +Y ++W + + P
Sbjct: 41 SRLIELSHQWQVHKNSK----------------ACVASYPCVVQNNILWFY-PRSEPEYK 83
Query: 199 DKL-----PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKRED 253
+ L P+ P F V + +LPY + +L+ENLMDPAH+P +H T K+ED
Sbjct: 84 EILQRKRPPYIPQIDDPSFVTVYGVRDLPYGYDVLVENLMDPAHVPYAHKGLMRTRKKED 143
Query: 254 ------------------AQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQN 295
PL E+ E GF + F +F APC
Sbjct: 144 PGRYNIHLLYTVEFDKEGGGPLKMEIEETNVEGFLSMLDR-------GFFKFVAPCTFYG 196
Query: 296 N-----------------RELVDSKTGEKH----YFTGLFLCRPTGQGKSMLIVRFGATK 334
+ + +D + EK +FLC P G+S L+ F
Sbjct: 197 SPLQTPSQALFKLIEPSYKISIDDQGKEKKKKQPTVMLVFLCIPVSPGRSRLVWAFPRNV 256
Query: 335 RSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT--KELYLNLRSSDTWVAE 392
+ K+ P+WY+H + + + D+ L + + K Y+ SSD +
Sbjct: 257 GVWMDKIIPRWYYHIGQNAILDSDIYLLHIEERNFATVGLDNWQKACYVP-TSSDNMIIT 315
Query: 393 YRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIGTMHAPNLA 452
+R W K + G +T ++P +P+K L
Sbjct: 316 FRNWFRKYCK---HQIGWATPITNQLPP----------------TPSKD--------QLL 348
Query: 453 NRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASGR-----QWKAFCLASAS 507
+RY+ HV+ C CS +K + +L V + A+ +A G ++ +A+A
Sbjct: 349 DRYWSHVMQCTSCSGALKKMKALEVALQVASVAVVGFLAVAKGTVVTSVVQRSAVVAAAV 408
Query: 508 LCLAG 512
LC A
Sbjct: 409 LCFAA 413
>gi|390572748|ref|ZP_10252944.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia terrae
BS001]
gi|389935349|gb|EIM97281.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia terrae
BS001]
Length = 362
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V +AP+GLT +QIVL++D +G++ +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-GNAPIGLTRLSEQIVLWRDQDGKVHALEDRCPHRGARLSLGWNLGNRVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G +P + A + CV++Y V+E G +++W P L
Sbjct: 85 CWYHGIEVDGSGTVQAVPAVSA-CPLEGQKCVKSYPVEEHAGAIFLWFGDDAHKEPTPLA 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVGEEYSQFLCVSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|413964128|ref|ZP_11403355.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. SJ98]
gi|413929960|gb|EKS69248.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia sp. SJ98]
Length = 336
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
EW P+ ++DVP+ G V D++IV+++D G ++D CPHR A+LS G ++ ++
Sbjct: 11 EWLPVCNSEDVPEGGARGFIVADERIVVWRDSIGAAHAWRDYCPHRGAQLSLGHVMRDQI 70
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW ++ EG+C++IP P+ + + AC T+ +E GV+W+ + L
Sbjct: 71 VCPYHGWSYDIEGQCLRIPSNPS-LRPSKRACATTFVCEEKYGVIWMCFGEPAY----AL 125
Query: 202 PWFENFARPGFQDVSTIHELPYDHS-ILLENLMDPAHIPISH 242
+F A PG + ++ + + ++EN +D AH H
Sbjct: 126 DFFPEAAIPGGRRINLAPQTVRSSAPRVVENFLDMAHFSFVH 167
>gi|229079696|ref|ZP_04212229.1| hypothetical protein bcere0023_23490 [Bacillus cereus Rock4-2]
gi|228703536|gb|EEL55989.1| hypothetical protein bcere0023_23490 [Bacillus cereus Rock4-2]
Length = 322
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 28/224 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + KD+ P+ V + VLY+D E++ CPHR A LS GQ+++G+L
Sbjct: 13 WYAVSYAKDI-KKIPVKKRVAGKDFVLYRDEKDEVQALSPYCPHRGADLSLGQVVNGKLV 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW-MSQKTPPNPDKL 201
C YHGW+F+ G CV+IP P + IP+ A +Y VKE G++W++ +++TPP
Sbjct: 72 CPYHGWEFDSCGTCVRIPSQP-NKPIPKFAHTLSYPVKEKIGLIWIYPDNEETPPEWQTF 130
Query: 202 PWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
EN F F H + +E+++D AH+ H +T ++ A+ +
Sbjct: 131 HVMENTPFKLSFFHATWNAHL-----TRSIESVLDIAHLAYVHKKT--IGRKTKAESTNY 183
Query: 260 EVTERTDR------------GFAGRW----GKEKDEPLPNFLRF 287
++ D+ F +W GK+++E ++ F
Sbjct: 184 KLEGTLDQFIFSNGDAYLEYKFPHQWMLHSGKQENESFIQYITF 227
>gi|124383222|ref|YP_001024411.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
mallei NCTC 10229]
gi|126446690|ref|YP_001078164.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia
mallei NCTC 10247]
gi|254357015|ref|ZP_04973290.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei 2002721280]
gi|124291242|gb|ABN00512.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei NCTC 10229]
gi|126239544|gb|ABO02656.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei NCTC 10247]
gi|148026042|gb|EDK84165.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
mallei 2002721280]
Length = 355
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V AP+G+T +QIVL++D G + +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGITRLSEQIVLWRDREGNVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G G K+P + ++ + ACV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGVGTVTKVPAV-SNCPLEGQACVKSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ P + + ++ ++N+MDP H H
Sbjct: 144 LPDELVAPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH 183
>gi|347528273|ref|YP_004835020.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136954|dbj|BAK66563.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 363
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 3/161 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++ + PL + D+ +V+Y+D +L +DRCPHR A LS G++I+G ++
Sbjct: 9 WYASAYADEI-GERPLARKLLDRDMVIYRDAEKQLAVLEDRCPHRFAPLSGGKVIEGTIQ 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F+ G C P + + ++A V + V E G+VW+W D LP
Sbjct: 68 CPYHGLRFDRTGACTHNPHMKGGGPL-KAASVAAWPVLEKYGIVWIWPGDPERAREDALP 126
Query: 203 WFENFARP-GFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ RP F V + + + ++++NL+D +H H
Sbjct: 127 RIDFLERPKDFSVVKGLLHVRGHYELVVDNLLDLSHAAYIH 167
>gi|413962107|ref|ZP_11401335.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. SJ98]
gi|413930979|gb|EKS70266.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. SJ98]
Length = 439
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 17/215 (7%)
Query: 83 WYPLYLTKDVPDDAPL-GLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
W P+ L +++P + P+ + + + VL++D G L CPHR A L+ G+L DG L
Sbjct: 27 WQPVALAEELPSERPVKAVRLMGEDFVLFRDEQGRLGMLDRDCPHRGADLAAGRLEDGGL 86
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C +HGW F+ G+C P PA + + + R+YEV E GV++ ++ TPP
Sbjct: 87 RCAFHGWLFDVNGQCTSTPGEPAGSTLCKRIKQRSYEVIERAGVIFAYIGSGTPP---AF 143
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
P F+ FA P + + LE +DPAH H ED +V
Sbjct: 144 PHFDCFAAPDEYTFAFKGLFECNWLQALEVGIDPAHASFLHRFF------EDE-----DV 192
Query: 262 TERTDRGFAGRWGKEKDEPLPNFLR-FEAPCVLQN 295
++ + F G + P+ LR FE+P +L N
Sbjct: 193 SDSYGKQFRGA-SANSEMPITKVLREFESPEILVN 226
>gi|421469070|ref|ZP_15917560.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
gi|400230637|gb|EJO60400.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans ATCC
BAA-247]
Length = 373
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V +AP+G+T +QIVL++D +G++ +DRCPHR A+LS G + G +
Sbjct: 43 WYPVAPSWQV-SNAPVGITRLSEQIVLWRDQDGKVHALEDRCPHRGARLSLGWNLGGSVA 101
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G K+P + A+ + + CV++Y V+E G +++W P P L
Sbjct: 102 CWYHGIEVDGSGTVNKVPAV-ANCPLEGTKCVKSYPVEEKAGAIFLWFGDDAHPEPAPLN 160
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ + ++ ++N+MDP H H
Sbjct: 161 LPVELVADEYAHFLCMSNWKCNYQYAIDNVMDPMHGAYLH 200
>gi|224015447|ref|XP_002297378.1| hypothetical protein THAPSDRAFT_bd783 [Thalassiosira pseudonana
CCMP1335]
gi|220967978|gb|EED86341.1| hypothetical protein THAPSDRAFT_bd783 [Thalassiosira pseudonana
CCMP1335]
Length = 187
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 27/190 (14%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK----DGNGELRCYQDRCPHRLAKLS 132
++++ WYP+ +DVP + P+ +T+FD VL K N D CPH+ LS
Sbjct: 1 FNYSSHWYPVIWARDVPLNNPIRVTLFDVDYVLAKVKLPKNNEVFYAMHDSCPHKKVALS 60
Query: 133 EGQLID------GRLECLYHGWQFEGE-GKCVKIPQ-LPADA-KIPRSACVRTYEVKESQ 183
EG++ L+C YHGW F+G GKCV+IPQ + +DA K R + Q
Sbjct: 61 EGRITSCGSPNKQYLQCSYHGWSFDGRSGKCVEIPQTISSDATKKKRREDATVVATTQVQ 120
Query: 184 GVVWV-----------WMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENL 232
G+VW+ M + P ++P PG++ + + P D ++L+EN+
Sbjct: 121 GMVWIHPSLTPLEALSLMEEGKLSPPPRIP---EVDLPGYRTTVAVRDFPIDWTVLMENI 177
Query: 233 MDPAHIPISH 242
MDP H +H
Sbjct: 178 MDPDHGFFAH 187
>gi|83944091|ref|ZP_00956547.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. EE-36]
gi|83844958|gb|EAP82839.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. EE-36]
Length = 355
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 99/216 (45%), Gaps = 33/216 (15%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + D D+ + LT+ Q +V Y+ +G++ +DRCPHRL LS+G+ I ++
Sbjct: 8 WYVAGWSTDFGDEL-VPLTLLAQNLVAYRTSDGQIAVLEDRCPHRLLPLSKGKRIGDTIQ 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F +G CV++ P + +P+SA V +Y V E G+V++WM +P
Sbjct: 67 CGYHGMTFGADGACVRV---PGQSNLPKSAYVDSYPVLERHGIVFIWMGDADKADPALAF 123
Query: 203 WFENFARPGFQDVSTIH-----ELPYDHSILLENLMDPAHIPISHDRTDWTAKRE----- 252
+ G+ +H + ++ + ENL+DPAH+ H T A E
Sbjct: 124 DMPELGQEGWH----VHHGDKLHIRANYLNVAENLVDPAHVSFVHPTTLGNAASENVPVH 179
Query: 253 ---------------DAQPLGFEVTERTDRGFAGRW 273
DA+P+GF G RW
Sbjct: 180 VKTADEVIVAWRWIRDAEPIGFFKAFGGFSGNVDRW 215
>gi|384251621|gb|EIE25098.1| hypothetical protein COCSUDRAFT_46585 [Coccomyxa subellipsoidea
C-169]
Length = 1215
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 114/411 (27%), Positives = 158/411 (38%), Gaps = 90/411 (21%)
Query: 138 DGRLECLYHGWQFEGEGKCVKIPQL------PADAKIPRSACVRTYEVKESQGVVWVWMS 191
DG L C YHGW+F GEGKC IPQ A PRS C + K QG+V+VW
Sbjct: 796 DGTLMCSYHGWRFSGEGKCTDIPQSLDPKANAAACSNPRS-CAISRPTKVLQGMVFVWGH 854
Query: 192 QKT-----------PPNPDKLPWFENFARPGFQDVSTI-------HELPYDHSILLENLM 233
+ P PD + E+ Q V T+ ELPY +L ENL
Sbjct: 855 SSSNAAAEAEAMPVPGVPD-MAMTEDIPSSTSQGVPTLAFLPDYYRELPYGWEVLAENLQ 913
Query: 234 DPAHIPISH----DRTD--------WTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPL 281
DP+H+P +H +R D ++R G +V R G +
Sbjct: 914 DPSHLPFAHHGVLNRRDDEKAGYYRMDSRRPKDSSSGQDVICVAGESIRPRLGDLQGRA- 972
Query: 282 PNFLRFEAPCVLQ---NNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVR--FGA--TK 334
+F+ P +++ R+ D E +F P GKS ++ F A K
Sbjct: 973 ---FQFDPPSLIRWYTYQRDQGDIDKHESWINMNVFYVIPVAPGKSAVLFSGFFTAHGAK 1029
Query: 335 RSPLA-----KLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKEL-----YLNLR 384
+ PL K P+W H VF+ D L Q E L+ ET E Y
Sbjct: 1030 KMPLIPQLIFKFRPRWESHCFTHLVFDGDSKILHMQ-ERLLAETSRNGESSWRKNYYMPA 1088
Query: 385 SSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPKVPAVVEHAPAGLVAGVSASSPAKGAIG 444
+D VA +RKW+D+ G G P P L S P
Sbjct: 1089 QADRLVAAFRKWLDERGGGGP--------------------PTRL----SGQLPPLDDRQ 1124
Query: 445 TMHAPNLANRYFRHVIHCKGCSSVIKAFSTWKNSLSVVAAALTVLAILASG 495
M+ +R+ +H HC C +KAF + ++ VAA + L L+S
Sbjct: 1125 EMY----LDRFNQHTRHCPSCMGAVKAFERLR--VAAVAAGVIFLLGLSSA 1169
>gi|442318048|ref|YP_007358069.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
gi|441485690|gb|AGC42385.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
stipitatus DSM 14675]
Length = 363
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 140/325 (43%), Gaps = 50/325 (15%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+ L ++++ D PL T+ +VL++ G+ DRCPHR LS G+++ G+L+
Sbjct: 26 WFILCTSREL-GDKPLSRTLQGTPLVLFRGEGGKPGALMDRCPHRNVPLSLGRVMQGQLQ 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP--NPDK 200
C YHGW+F+ G+C IP + + RS CV +Y +E G +WV+ + P P +
Sbjct: 85 CGYHGWRFDTGGQCRAIPGFLGEPEA-RSRCVTSYATREQDGFIWVYSTPGVEPATEPYR 143
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD---RTD----------- 246
P + AR + V I P LEN +D H H RT+
Sbjct: 144 FPLLD--ARE-YTTVRRILRAPGSLHATLENTLDVPHTAYLHGGLFRTEEKRNEIEVVVR 200
Query: 247 WTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE 306
+A R +A+ +G E G GR + +F RF P + Q V+ + G+
Sbjct: 201 RSADRVEAEYIG----EPRPSGVVGRLLAPGGGVVQHFDRFLMPSIAQ-----VEYRIGD 251
Query: 307 KHYFTGLFLCRPTGQGKSML--IVRFGATKRSPLAKLFPKWYFHQ-------NASKVFEQ 357
+ P +++ +V F R PL P+W A +F Q
Sbjct: 252 ASHIMVTSAMTPVSDWDTLVYAVVTF----RLPL----PRWLLRAVLPIAMPVALHIFGQ 303
Query: 358 DMGFLSSQNEVLMK---ETVPTKEL 379
D L +Q E + + ET + E+
Sbjct: 304 DARILKTQTEAIRRFGTETYASTEI 328
>gi|414172135|ref|ZP_11427046.1| hypothetical protein HMPREF9695_00692 [Afipia broomeae ATCC 49717]
gi|410893810|gb|EKS41600.1| hypothetical protein HMPREF9695_00692 [Afipia broomeae ATCC 49717]
Length = 343
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 5/167 (2%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG 139
T WYP+ V + + V ++ IV+Y+ +G + QD CPHRLA LS G+L
Sbjct: 5 TNAWYPVVWADRVGRELTRHV-VLEEPIVIYRLEDGSIAALQDACPHRLAPLSLGKLKGD 63
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 199
+EC YHG F+ GKCV I P IP +A VR+Y ++ G+VW+WM +
Sbjct: 64 NIECGYHGMTFDCSGKCVLI---PGQDVIPGNALVRSYPLQIKYGLVWLWMGDPKKADLS 120
Query: 200 KLPWFENFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRT 245
K+ + G+ V + ++ L +NL+DPAH+ H T
Sbjct: 121 KMFHLPQYEAEGWHAVQGDTLRIECNYLSLCDNLLDPAHVTFVHTTT 167
>gi|238767602|dbj|BAH66640.1| chlorophyllide a oxygenase [Nephroselmis pyriformis]
Length = 305
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 114 NGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC 173
+G C +D C HR LS G + G+ C YHGW+F G+G C +IP + + S
Sbjct: 3 DGTAACVKDECAHRACPLSLGTVEGGKATCAYHGWKFGGDGACTEIPSVGSRGAAGIS-- 60
Query: 174 VRTYEVKESQGVVWVWMSQKTPPN--PDKLPWFENFARPGFQDVSTIHELPYDHSILLEN 231
+R+ V+E G+VWVW P P L E F + ++P +H +LLEN
Sbjct: 61 IRSLPVQEVDGLVWVWPGSAEPAAEIPRDLRVPEGFTL----HAEIVLDVPVEHGLLLEN 116
Query: 232 LMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPC 291
L+D AH P +H T + A P + + R G W +P P + FE PC
Sbjct: 117 LLDLAHAPFTHTS---TFAKGWAVPDLVKFSTDKMRTLGGAW-----DPYPIDMSFEPPC 168
Query: 292 ------VLQNNRELVD-SKTGE-KHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFP 343
L+ E+ ++ GE + + L +C P+ +G++ L+ R + P K P
Sbjct: 169 HVLSLIGLEKPGEVASGTRAGECERHLHQLHVCLPSREGQTRLLYRM-SLDFLPWVKHVP 227
Query: 344 --KWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKV 400
K + A++V +D+ ++ Q + ++ E +++ N D +YR W + +
Sbjct: 228 GIKMVWEAMAAQVLGEDLRLVAGQQDRMVNEGA---QIWGNPMGYDELGVKYRMWRNSL 283
>gi|167896912|ref|ZP_02484314.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 7894]
Length = 330
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Query: 77 YDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+D W P+ L++ V A L + +Q +VL++D + + +DRC HR A LS G++
Sbjct: 9 FDSIARWMPVALSEQVSGRAALAVICMEQPLVLFRDASSAVCAMEDRCAHRRAPLSLGRV 68
Query: 137 I-DGRLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
DGRL+C YHGW ++G G CV IP L A ++P Y+ E G +W ++
Sbjct: 69 TPDGRLQCAYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWA-CARDA 127
Query: 195 PPNPDKLPWFENFAR 209
PP + +P AR
Sbjct: 128 PPPAEAIPRAPRSAR 142
>gi|386397519|ref|ZP_10082297.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM1253]
gi|385738145|gb|EIG58341.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM1253]
Length = 349
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 133/327 (40%), Gaps = 35/327 (10%)
Query: 96 APLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 155
A L T+ + +V+Y+ +G + +D C HRL LS+G+L + C YHG ++ +G+
Sbjct: 22 ALLPRTICGKHVVMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGR 81
Query: 156 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP---WFENFARPGF 212
C +P+ I SACVR Y V E +W+WM +P +P W + A G
Sbjct: 82 CTF---MPSQETINPSACVRAYPVVERHRYIWLWMGDPALADPALVPDLHWNHDPAWAG- 137
Query: 213 QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGR 272
D TIH + D+ ++L+NLMD H H + E F+VT R
Sbjct: 138 -DGKTIH-VNCDYRLVLDNLMDLTHETFVHGS---SIGNEAVAEAPFDVTHGEKTVTVTR 192
Query: 273 WGKEKDEP--------------LPNFLRFEAPCVLQNNRELVDSKTG-----EKHYFTGL 313
W + + P +RFEAPC + + + + TG G
Sbjct: 193 WMRGIEAPPFWAKQLGKSGLVDRWQIIRFEAPCTIAIDVGVAPTGTGAPEGDRSQGVNGF 252
Query: 314 FLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKET 373
L T + + + + L + + S +F +D L +Q M E
Sbjct: 253 VLNTITPETEKTCHYFWAFVRNYQLGEQRITTEIREGVSGIFHEDELILEAQQRA-MDEN 311
Query: 374 VPTKELYLNLRSSDTWVAEYRKWMDKV 400
LN+ + W RK +DK+
Sbjct: 312 PDCIFYNLNIDAGAMWT---RKLIDKM 335
>gi|218439920|ref|YP_002378249.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7424]
gi|218172648|gb|ACK71381.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7424]
Length = 367
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 1/165 (0%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + + L + V+ Q I +Y+D N +L ++ CPH+ +G++ + L
Sbjct: 36 WYPVAWSHQLKPCQILPVVVWQQAIAVYRDVNHQLHALENACPHKGVVFDKGEVFETHLV 95
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F GEG+CVKIP LP + K+P A R Y ++E G++W++ + +P
Sbjct: 96 CPYHGWEFNGEGECVKIPYLPPEQKLP-CAKARNYPIQEKYGIIWIFPGDPSLAELKTIP 154
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDW 247
+ + V SI EN MD H + D W
Sbjct: 155 DVPEYNESEWLIVEIPAHFQAHFSICNENTMDVFHGFLHRDIQGW 199
>gi|187921880|ref|YP_001893469.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187720318|gb|ACD21540.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 430
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
Query: 83 WYPLYLTKDVP--DDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
W P ++P D P + + + +++++D NG+L + CPHR A L G+ +
Sbjct: 27 WIPFLCEHELPAADAPPQRIKLLGEDLIVFRDSNGKLGMIDEFCPHRAASLFYGRNEENG 86
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C+YHGW+F+ G CV +P PA + I +++Y V+E G+ WV+M +TP +
Sbjct: 87 IRCIYHGWKFDVNGSCVDMPSEPASSTIRECMKIKSYPVREFAGLAWVYMGSETP--APE 144
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 246
LP FE P + + + LE +D AH+ H R D
Sbjct: 145 LPRFEWMEYPASHRHMSRWQQDCNFLQALEGEVDEAHVAFLHRRLD 190
>gi|302831235|ref|XP_002947183.1| hypothetical protein VOLCADRAFT_87282 [Volvox carteri f.
nagariensis]
gi|300267590|gb|EFJ51773.1| hypothetical protein VOLCADRAFT_87282 [Volvox carteri f.
nagariensis]
Length = 547
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 151/382 (39%), Gaps = 86/382 (22%)
Query: 89 TKDVPDDAPLGLTVFDQQIVLYKDGNG-ELRCYQDRCPHRLAKL---------------- 131
T+D+ P + + +V++ D N R ++D CPHRL L
Sbjct: 19 TRDLDRSRPHRFVLLNIPLVIWWDSNAASWRVFEDVCPHRLVPLRCAATERDEGSEGPQH 78
Query: 132 ----------------SEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACV 174
SEG++ G LEC YHGW F +G+C +PQ + PR AC
Sbjct: 79 VYTNTLTIGPTCTPLRSEGRINKAGLLECGYHGWAFNSQGRCEVVPQ-QGKSDTPR-ACA 136
Query: 175 RTYEVKESQGVVWVW---MSQKTPPN-----------------PDKLPWFENFARPG--- 211
+ E QG+++V + PN ++P P
Sbjct: 137 VAFHAAERQGLMFVLPRPLPSALLPNGAANGCLGEALAEAVAEETRIPLVPELDEPNGKW 196
Query: 212 -FQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE----VTERTD 266
QDV +LPYD S L+EN++D +H+P +H A + +G VT ++
Sbjct: 197 IAQDV--WRDLPYDWSTLMENVLDASHVPFTHH-----ASMSNRNTIGLYDLKLVTPLSE 249
Query: 267 RGFAGRW--GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKS 324
RGF G W G + P F AP ++N +D+K RP GK
Sbjct: 250 RGFTGVWKTGPRAGKLGPQSTVFTAPAFMRNR---LDAKGFSAMTVVYAVPMRP---GKC 303
Query: 325 MLIVRFGATKRSPLAKL----FPKWYFHQNASKVFEQDMGFLSSQNEVLMKET---VPTK 377
LI R +P+ +L P W+ H ++ + E D FL E L + +
Sbjct: 304 RLINRNILRFNNPIPQLVFSSLPDWWSHVSSHVLLEDDQIFLHLGEEELARRRAAGLTHS 363
Query: 378 ELYLNLRSSDTWVAEYRKWMDK 399
++ +DT+V + +W+ K
Sbjct: 364 QVCYMPSQADTYVIAFNRWIQK 385
>gi|161520532|ref|YP_001583959.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia multivorans
ATCC 17616]
gi|189353278|ref|YP_001948905.1| vanillate monooxygenase [Burkholderia multivorans ATCC 17616]
gi|421475922|ref|ZP_15923852.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
gi|160344582|gb|ABX17667.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans ATCC
17616]
gi|189337300|dbj|BAG46369.1| vanillate monooxygenase [Burkholderia multivorans ATCC 17616]
gi|400229377|gb|EJO59228.1| Rieske [2Fe-2S] domain protein [Burkholderia multivorans CF2]
Length = 356
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V +AP+G+T +QIVL++D +G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-SNAPVGITRLSEQIVLWRDQDGKVHALEDRCPHRGARLSLGWNLGGSVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G K+P + A+ + + CV++Y V+E G +++W P P L
Sbjct: 85 CWYHGIEVDGSGTVNKVPAV-ANCPLEGTKCVKSYPVEEKAGAIFLWFGDDAHPEPAPLN 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ + ++ ++N+MDP H H
Sbjct: 144 LPVELVADEYAHFLCMSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|399021599|ref|ZP_10723693.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
gi|398090943|gb|EJL81398.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
Length = 341
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 9/177 (5%)
Query: 94 DDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGE 153
+D P T+ + IV++ G+ QDRC HR AKLS+G + +G + C YHGW F+
Sbjct: 23 EDGPKPFTLLGENIVVWLKSPGKPAALQDRCCHRTAKLSKGFVDNGNIVCGYHGWTFDCA 82
Query: 154 GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ 213
G CV++PQ AD +P A V++Y +E G VWV + + P D +P+F PG++
Sbjct: 83 GACVRVPQ-NADGSVPAGAMVQSYYCEERYGYVWVALEK---PLRD-IPFFPEETTPGYR 137
Query: 214 DVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGF 269
+ +E ++ ++EN D +H H T + +P +E+ E TD GF
Sbjct: 138 RIFQFYERWETSALRMMENSFDNSHFSYVHRGT--FGLYDQPKPEKYEINE-TDYGF 191
>gi|302854901|ref|XP_002958954.1| hypothetical protein VOLCADRAFT_100270 [Volvox carteri f.
nagariensis]
gi|300255700|gb|EFJ39989.1| hypothetical protein VOLCADRAFT_100270 [Volvox carteri f.
nagariensis]
Length = 561
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 136/353 (38%), Gaps = 81/353 (22%)
Query: 63 ASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVF------------DQQIVLY 110
+ E +RQ ++W ++WYP+ + P T+ Q +VL+
Sbjct: 134 SDTERESDQRQ---FNWFQQWYPVAALDALDPTRPHAFTLLHTNPHLHRNATVGQDLVLW 190
Query: 111 KDGNGELRCYQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEGEGKCVKIPQLPAD---A 166
+DG+G R ++D CPHRLA LSEG++ DG L C YH W+F+G G C +P D
Sbjct: 191 RDGSGRWRAFKDACPHRLAPLSEGRIEKDGTLLCAYHAWRFDGSGACTAMPFCSPDDPGR 250
Query: 167 KIPRSACVRTYEVKESQGVVWVWMS----------QKTPPNPDKLPWFENFARPGFQDVS 216
+ PRS C +Y E G++WVW K PP P P ++ RP
Sbjct: 251 RNPRS-CAVSYPALERGGLLWVWAQGGPGAEEAAAAKQPPVP---PEVQDDGRPR----- 301
Query: 217 TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT--ERTDRGFAGRWG 274
A + DR +D +P EVT + GF
Sbjct: 302 -------------------AGVTCMGDRY------KDPRPFQLEVTLPPSLEEGFKVHLP 336
Query: 275 KEKDEPLPN-FLRFEAPCVLQNNRELVDSKTGEKHYFTG---------LFLCRPTGQGKS 324
K E + + F P +++ E D F+ + + P +G
Sbjct: 337 NSKSETVREAYTDFTPPGLVRIQSENRDGSRTILALFSTPIRPGWTRLIMVSSPDNEGGG 396
Query: 325 MLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTK 377
+V F + K+ P W H QD+ FL Q +M++ + K
Sbjct: 397 RSVVGFVGS------KMLPVWLAHLLGPLFLHQDLLFLHYQERAVMRQQLERK 443
>gi|413960602|ref|ZP_11399831.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia sp.
SJ98]
gi|413931316|gb|EKS70602.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia sp.
SJ98]
Length = 352
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V + AP+GLT QIVL++D G++ +DRCPHR A+LS G + G +
Sbjct: 25 WYPVAPSWQVAN-APIGLTRLGDQIVLWRDNEGKVHALEDRCPHRGARLSLGWNLGGSVA 83
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G K+P + A + CV++Y V+E G +++W P L
Sbjct: 84 CWYHGIEVDGSGTVQKVPAVSA-CPLEGQKCVKSYPVEERAGAIFLWFGDDANKEPAPLV 142
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 143 LPEELVAEEYASFLCMSHWKCNYQYAIDNVMDPMHGAYLH 182
>gi|429770138|ref|ZP_19302217.1| rieske [2Fe-2S] domain protein [Brevundimonas diminuta 470-4]
gi|429185400|gb|EKY26380.1| rieske [2Fe-2S] domain protein [Brevundimonas diminuta 470-4]
Length = 371
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 15/182 (8%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG 139
T+ WY + L +DVP + + + +++ + GE+ +D CPHR A LS G+L++
Sbjct: 28 TDAWYFVALARDVPVASLKRYEIMGEPVLIGRTRAGEVYGMRDICPHRAAPLSAGRLVEK 87
Query: 140 -----RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMS-- 191
+EC YHGW+F +G C IP L D + VR+Y V+ESQG+V+VWM+
Sbjct: 88 PGEGETIECPYHGWRFRPDGVCAAIPSLVEDQAFEANRIKVRSYPVRESQGMVFVWMAAD 147
Query: 192 QKTPPNPDKLPWFENFARPGFQDVSTIHE-LPYDHSI--LLENLMDPAHIPISHDRTDWT 248
+ P PD+ P F PG + E + +D I + LMDPAH P H + W
Sbjct: 148 ARNPSEPDQEP--PQF--PGAVGQPRLVEWMDFDSHIDHAVVGLMDPAHGPYVHQQWWWR 203
Query: 249 AK 250
++
Sbjct: 204 SE 205
>gi|423104817|ref|ZP_17092519.1| hypothetical protein HMPREF9686_03423 [Klebsiella oxytoca 10-5242]
gi|376382780|gb|EHS95513.1| hypothetical protein HMPREF9686_03423 [Klebsiella oxytoca 10-5242]
Length = 340
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYSVQEAHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFARPG-FQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + + A + + ++ LEN+MDP H H
Sbjct: 133 LNFPQELADSDKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|408376802|ref|ZP_11174406.1| vanillate O-demethylase oxygenase [Agrobacterium albertimagni
AOL15]
gi|407749492|gb|EKF61004.1| vanillate O-demethylase oxygenase [Agrobacterium albertimagni
AOL15]
Length = 353
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 133/323 (41%), Gaps = 31/323 (9%)
Query: 98 LGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCV 157
L T+ ++ +VLY+ NG D C HRL LS G+L + C YHG +F+ G+CV
Sbjct: 25 LPRTICNKPVVLYRKENGTPVALADACWHRLVPLSLGRLEGDNVICGYHGLEFDETGRCV 84
Query: 158 KIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVST 217
+P+ I SACV++Y + E +W+W +P +P P +
Sbjct: 85 ---YMPSQDTINPSACVKSYPIAEKHRFIWIWPGDPALADPALVPDMHWNQDPDWAADGK 141
Query: 218 IHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEK 277
+ E+ D+ ++++NLMD H H + R A+ FE + + RW ++
Sbjct: 142 LIEVKCDYRLVVDNLMDLTHETFVHGSS--IGNRAVAE-APFESSHSDRFAYITRWMEDI 198
Query: 278 DEP--------------LPNFLRFEAPCVLQNNRELVDSKTGEKH-----YFTGLFLCRP 318
D P +RFEAPC + + + ++ TG K G L
Sbjct: 199 DPPPFWRKQFGRPGKVDRWQIIRFEAPCTVTIDVGVAEAGTGAKQGDRSKGVNGYVLNTI 258
Query: 319 TGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKE 378
T + + + L + + VF +D L +Q + + P +
Sbjct: 259 TPSTDKTCLYFWAFARNYDLGNQARTHELREGVAGVFREDEEVLEAQQRAI--DANPDHQ 316
Query: 379 LY-LNLRSSDTWVAEYRKWMDKV 400
Y LN+ + W RK +D++
Sbjct: 317 FYNLNIDAGSMWA---RKLIDRM 336
>gi|423125744|ref|ZP_17113423.1| hypothetical protein HMPREF9694_02435 [Klebsiella oxytoca 10-5250]
gi|376398825|gb|EHT11448.1| hypothetical protein HMPREF9694_02435 [Klebsiella oxytoca 10-5250]
Length = 340
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYSVQEAHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFARPG-FQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + + A + + ++ LEN+MDP H H
Sbjct: 133 LNFPQELADSDKYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|163851145|ref|YP_001639188.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium
extorquens PA1]
gi|163662750|gb|ABY30117.1| Rieske (2Fe-2S) domain protein [Methylobacterium extorquens PA1]
Length = 357
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 91/192 (47%), Gaps = 10/192 (5%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLID 138
W WY D+ D P T+ ++IVL+ DG GE DRC HR A+LS+G D
Sbjct: 9 WRHYWYATLRLSDLAD-GPKPFTLMGERIVLFLDGEGEPAAMMDRCCHRTARLSKGWCED 67
Query: 139 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
G + C YHGW ++ G +IPQ + +PR A V++Y G WV +++
Sbjct: 68 GLIVCGYHGWAYDRHGALARIPQFSPEQVVPRLA-VKSYHCTAKYGYAWVCLAEPYA--- 123
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPL 257
+P PG++ + H++ + L+EN D AH H T + P
Sbjct: 124 -TIPEIPEDTMPGYRRIQQFHDVWKTSPLRLMENSFDNAHFAFVHQNT--FGQISQPIPE 180
Query: 258 GFEVTERTDRGF 269
+E+TE T+ GF
Sbjct: 181 KYEITE-TEYGF 191
>gi|78061955|ref|YP_371863.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
gi|77969840|gb|ABB11219.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
Length = 358
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V +AP+GLT +QIVL++D +G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-SNAPVGLTRLSEQIVLWRDHDGKVHALEDRCPHRGARLSLGWNLGGNIA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G ++P + ++ + + CV++Y V+E G +++W + P L
Sbjct: 85 CWYHGIEVDGGGTVNRVPAV-SNCPLEGTKCVKSYPVEEKAGAIFLWFGDEAHGEPAPLN 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVADEYGHFLCVSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|221196079|ref|ZP_03569126.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans CGD2M]
gi|221202752|ref|ZP_03575771.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans CGD2]
gi|221176686|gb|EEE09114.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans CGD2]
gi|221182633|gb|EEE15033.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans CGD2M]
Length = 356
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V +AP+G+T +QIVL++D +G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-SNAPVGITRLSEQIVLWRDQDGKVHALEDRCPHRGARLSLGWNLGGSVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G K+P + A+ + + CV++Y V+E G +++W P P L
Sbjct: 85 CWYHGIEVDGSGTVNKVPAV-ANCPLEGTKCVKSYPVEEKAGAIFLWFGDDAHPEPAPLN 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ + ++ ++N+MDP H H
Sbjct: 144 LPVELVADEYAHFLCMSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|443312467|ref|ZP_21042084.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
gi|442777445|gb|ELR87721.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
Length = 338
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 90/164 (54%), Gaps = 7/164 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP T ++ ++P + ++IV++ D G+ QDRC HR A+LS G+++DG +
Sbjct: 13 WYPAIPTTEL-SNSPNPFELLGEKIVIWLDKAGKPAAVQDRCCHRSAQLSIGKVVDGNIC 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQF +G CV +PQL D IP + +++Y E G VWV + + P D LP
Sbjct: 72 CAYHGWQFNSDGACVCVPQL-KDETIPANYKIKSYRCTERYGYVWVCLEE---PLID-LP 126
Query: 203 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRT 245
+ +P ++ + +EL ++ ++EN D AH H T
Sbjct: 127 EIDEATKPDYRLLHEFYELWKCAALRVMENEFDLAHPTFVHTTT 170
>gi|325969786|ref|YP_004245978.1| Rieske (2Fe-2S) domain-containing protein [Vulcanisaeta moutnovskia
768-28]
gi|323708989|gb|ADY02476.1| Rieske (2Fe-2S) domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 333
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 11/167 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W + +V D PLG+ + +V ++D +G++ D CPHR AKLS G+++DG ++
Sbjct: 2 WIATLSSSEVGRDRPLGVKRLNMNLVFWRDKSGKVNALLDDCPHRHAKLSLGKVVDGNIQ 61
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG++F+G G+ VKIP L +++P+ + E+ ++W+W P +
Sbjct: 62 CPYHGFEFDGSGRTVKIPALGKASEVPKYLRAFSIPTYETYDIIWIWYGNGDLSKPPR-- 119
Query: 203 WFENFARPGFQDVSTIHELPYDHSILL----ENLMDPAHIPISHDRT 245
+F++ ++ST E S+ L EN +D H+P H T
Sbjct: 120 FFDD-----LDELSTYSEYSEVWSVSLPRAVENQLDVFHLPFVHYNT 161
>gi|254254788|ref|ZP_04948105.1| Phenylpropionate dioxygenase [Burkholderia dolosa AUO158]
gi|124899433|gb|EAY71276.1| Phenylpropionate dioxygenase [Burkholderia dolosa AUO158]
Length = 347
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 89/177 (50%), Gaps = 11/177 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T D D PLG + +++V ++D NG + +D CPHR A LS G + DGRL
Sbjct: 7 WY-VACTPDEFADKPLGRQICGERMVFFRDANGTVAALEDFCPHRGAPLSLGTVRDGRLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW---MSQKTPPNPD 199
C YHG +GKCV +P ++ +R Y E G VWVW +Q P
Sbjct: 66 CGYHGLTMGADGKCVSMPC----QRVGGIPAIRRYPAVERYGFVWVWPGDPAQADPATIH 121
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
+L W ++ PG+ ++ + D+ ++++NLMD H H + + E+A P
Sbjct: 122 RLHWADD---PGWAYGGGLYHIDCDYRLMIDNLMDLTHETYVHASSIGQPEIEEAPP 175
>gi|167839497|ref|ZP_02466181.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
thailandensis MSMB43]
gi|424905101|ref|ZP_18328608.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
thailandensis MSMB43]
gi|390929495|gb|EIP86898.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
thailandensis MSMB43]
Length = 355
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V AP+G+T +QIVL++D G + +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGITRLSEQIVLWRDRQGNVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G G K+P + ++ + +CV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQSCVKSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ P + + ++ ++N+MDP H H
Sbjct: 144 LPDELVGPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH 183
>gi|443317166|ref|ZP_21046585.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
gi|442783241|gb|ELR93162.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
Length = 351
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 102/208 (49%), Gaps = 26/208 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++D+ T+ ++ I+L + G+ +D CPHR LS G+ +E
Sbjct: 14 WYHALPSRDLKPGQMRSKTLLNEPILLGRTQRGQAFALRDICPHRAVPLSCGRFDGESVE 73
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW+F G C++IP L AD + S VR Y+V+E QG VW++M+ PNP ++
Sbjct: 74 CCYHGWRFGPNGSCLQIPSLMADQTLDLSKFDVRRYDVQEVQGNVWIYMAD---PNPQQV 130
Query: 202 --PWFENFARPGFQDVS---TIHELPY----DHSILLENLMDPAHIPISHDRTDWTA--- 249
P FE PGF + + + +P+ DH+++ LMDPAH P H W
Sbjct: 131 HPPRFEVPRIPGFPEDAQPQISYTMPFSCFVDHAVV--GLMDPAHSPFVHRAWWWRGGNL 188
Query: 250 ----KREDAQPLGFEV----TERTDRGF 269
K D P GF + E RG+
Sbjct: 189 NPEIKWFDPSPYGFTMRKHRMENMGRGY 216
>gi|365972023|ref|YP_004953584.1| Vanillate O-demethylase oxygenase subunit [Enterobacter cloacae
EcWSU1]
gi|365750936|gb|AEW75163.1| Vanillate O-demethylase oxygenase subunit [Enterobacter cloacae
EcWSU1]
Length = 340
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPMLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA K P C R+Y V+E G +++W PD+
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDKCPLVGQQCARSYNVQEVHGAIFLWFGVTADQQPDE 132
Query: 201 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + + A + + ++ LEN+MDP H H
Sbjct: 133 LSFPDELADTDAYSNFLCTAAWKCNYQYALENVMDPMHGTYLH 175
>gi|282897695|ref|ZP_06305694.1| Rieske (2Fe-2S) region protein [Raphidiopsis brookii D9]
gi|281197374|gb|EFA72271.1| Rieske (2Fe-2S) region protein [Raphidiopsis brookii D9]
Length = 360
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 152/348 (43%), Gaps = 45/348 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + + + + I+L +D NG++ +D CPHR LS G+ ++E
Sbjct: 19 WYYALPSSQLKTGKMVSRVLLREPILLTRDKNGQVFAIEDICPHRAVPLSCGRFDGEQVE 78
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQKTPP----- 196
C YHGW+F+ +GKC +IP L + I S V++Y V E+QG +W++M K
Sbjct: 79 CCYHGWRFDSQGKCTQIPSLLPEQSIDLSKFNVKSYPVYETQGNIWIYMYDKEGASINAE 138
Query: 197 --NPDKLPWFENFARPGFQDVSTIHELP--YDHSILLENLMDPAHIPISHDRTDWTAKRE 252
N ++P F N D+ + + P DH++ LMDPAH P H W + +
Sbjct: 139 IGNIPQIPGFSNIE----PDLVEVMKFPCFIDHAV--TGLMDPAHSPYVHQVWWWRSGKL 192
Query: 253 DAQPLGFEVTERTDRGFAGRWGKEKDEP-------------LPNF-LRFEAPCVLQNNRE 298
+ F + +D GF R K + +P + F P V
Sbjct: 193 HEEVKQF---DPSDYGFTVRRHKLSNNTENMSRLYWLVGGGIPEVEISFRLPGV------ 243
Query: 299 LVDSKTGEKHYFTGLFLCRPTGQGKSML-IVRFGATK----RSPLAKLFPKWYFHQNASK 353
++ T KH L P ++ + V +G +PL ++ + + +Q+ +
Sbjct: 244 RIEEITFGKHRVCNLTAVTPISDTETEVNFVLYGIPNWLKIFTPLIQILTRKFLYQDRNV 303
Query: 354 VFEQDMGFLSSQNEVLMKETVPTKELYLNL-RSSDTWVAEYRKWMDKV 400
V +Q +G + L+K++ + Y L R AE R++++ V
Sbjct: 304 VEKQQIGLQYNPILRLIKDSDMQAQWYFQLKREFSRAAAENREFVNPV 351
>gi|186681095|ref|YP_001864291.1| Rieske (2Fe-2S) domain-containing protein [Nostoc punctiforme PCC
73102]
gi|186463547|gb|ACC79348.1| Rieske (2Fe-2S) domain protein [Nostoc punctiforme PCC 73102]
Length = 358
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 146/346 (42%), Gaps = 37/346 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + + + ++L +D NG++ +D CPHR LS G+ +E
Sbjct: 13 WYYALPSNQIKPGMMISRIFLGEPVLLVRDQNGKVSAMRDICPHRAVPLSCGRFDGQEVE 72
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW+F G+C IP L + ++ S V++YEV+E+QG +W++M+ P
Sbjct: 73 CCYHGWRFNSAGRCTAIPSLVEEQQMDLSRFDVQSYEVREAQGNIWIYMADPDKSQPAAS 132
Query: 202 PWFENFARPGFQDVS-----------TIHELP--YDHSILLENLMDPAHIPISHDRTDWT 248
E PGF++ S + + P DH+++ LMDPAH P H W
Sbjct: 133 D-MEIPVIPGFEERSLRGASPTPQFVEVMKFPCFVDHAVV--GLMDPAHSPYVHRAWWWR 189
Query: 249 A-------KREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNF-LRFEAPCVLQNNRELV 300
+ K+ DA P GF + GR +P + F P V +
Sbjct: 190 SGQLHEEVKQFDASPYGFTMRRHRLPANGGRLYLLIGGGVPETEISFRLPSV------RI 243
Query: 301 DSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATK-----RSPLAKLFPKWYFHQNASKVF 355
+ T H L P ++ + +T PL + + + Q+ + V
Sbjct: 244 EETTIGNHRVVNLTAVTPISDTETEVTFVLYSTLPWVGFFKPLLHVLAQTFLGQDRTVVE 303
Query: 356 EQDMGFLSSQNEVLMKETVPTKELYLNL-RSSDTWVAEYRKWMDKV 400
+Q +G + L+K++ + Y L R VAE R++++ V
Sbjct: 304 KQQIGLKYNPVLRLIKDSDMQAQWYYQLKREYARSVAEGREFVNPV 349
>gi|421748983|ref|ZP_16186499.1| Rieske 2Fe-2S family protein [Cupriavidus necator HPC(L)]
gi|409772226|gb|EKN54294.1| Rieske 2Fe-2S family protein [Cupriavidus necator HPC(L)]
Length = 345
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLID-GRL 141
WY L + + DD P T+ + +VL+K +G L +DRC HR A+LS+G + + G +
Sbjct: 13 WYAL-MPVSMLDDGPKPFTLLGEDLVLWKRSDGSLAALRDRCCHRTARLSKGWVNERGDI 71
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW+++ G CV+IPQ P D ++P A V Y +E G VWV + P PD
Sbjct: 72 VCGYHGWEYDCSGACVRIPQAP-DNRVPAGARVPAYRAEEKYGYVWVALDDPLQPIPD-- 128
Query: 202 PWFENFARPGFQDVSTIHELPYDHSIL--LENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
F P ++ + +E ++ S L +EN D +H H A + +P +
Sbjct: 129 --FPEEGDPAYRRILQYYER-WNTSPLRVMENAFDNSHFSFVHRANFGIA--DQPKPEKY 183
Query: 260 EVTERTDRGFAGRWGKEKDEPLP 282
E+T+R WG E + +P
Sbjct: 184 ELTQR-------EWGFEAETLVP 199
>gi|329891293|ref|ZP_08269636.1| rieske 2Fe-2S domain protein [Brevundimonas diminuta ATCC 11568]
gi|328846594|gb|EGF96158.1| rieske 2Fe-2S domain protein [Brevundimonas diminuta ATCC 11568]
Length = 397
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 94/185 (50%), Gaps = 21/185 (11%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG 139
T+ WY + L +DVP + + + +++ + GE+ +D CPHR A LS G+L++
Sbjct: 54 TDAWYFVALARDVPVASLKRYEIMGEPVLIGRTRAGEVYGMRDICPHRAAPLSAGRLVEK 113
Query: 140 -----RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMS-- 191
+EC YHGW+F +G C IP L D + VR Y V+ESQG+V+VWM+
Sbjct: 114 PGEGETIECPYHGWRFRPDGVCAAIPSLVEDQAFEANRIKVRVYPVRESQGMVFVWMAAD 173
Query: 192 QKTPPNPDKLPWFENFARPGFQDVST----IHELPYDHSI--LLENLMDPAHIPISHDRT 245
+ P PD+ P P F + + + +D I + LMDPAH P H +
Sbjct: 174 ARNPSEPDQEP-------PQFPGAVSQPRLVEWMDFDSHIDHAVVGLMDPAHGPYVHQQW 226
Query: 246 DWTAK 250
W ++
Sbjct: 227 WWRSE 231
>gi|407709870|ref|YP_006793734.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
gi|407238553|gb|AFT88751.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
phenoliruptrix BR3459a]
Length = 367
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V DAP+G+T QIVL++D G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-GDAPIGITRLGDQIVLWRDKEGKVHALEDRCPHRGARLSLGWNLGGSVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G G K+P + A + CV++Y +E G V++W P L
Sbjct: 85 CWYHGIEINGSGTVTKVPAVSA-CPLEGQKCVKSYPAQEHAGAVFLWFGDDAHKEPAPLN 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVGEEYASFLCMSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|110680835|ref|YP_683842.1| vanillate O-demethylase oxygenase [Roseobacter denitrificans OCh
114]
gi|109456951|gb|ABG33156.1| vanillate O-demethylase oxygenase, putative [Roseobacter
denitrificans OCh 114]
Length = 346
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 100 LTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 159
+TV ++I +++ +GEL +D CPHR LS+G++ +EC YHG F G+CV
Sbjct: 23 ITVLGEKICVFRSESGELVGLEDACPHRKLPLSKGRIKGDTVECGYHGLTFNCVGQCV-- 80
Query: 160 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 218
P IP +A V Y + E G+VW+WM +P + EN+ P + +
Sbjct: 81 -WAPGSGGIPSNAKVHAYPLHEKYGLVWIWMGNPALADPADIFEIENYDNPAWGINRGAA 139
Query: 219 HELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKD 278
EL ++ ++ +NL+DP H+ H ++ + A PL +T+ D RW +
Sbjct: 140 MELDCNYLLMCDNLLDPTHVAWVH-QSSFAADATKDTPL--RITKTDDGVIVHRWMMDH- 195
Query: 279 EPLPNF---LRFEAPC 291
EP P + + FE C
Sbjct: 196 EPAPFYKKVVEFEGNC 211
>gi|440286235|ref|YP_007339000.1| ring-hydroxylating dioxygenase, large terminal subunit
[Enterobacteriaceae bacterium strain FGI 57]
gi|440045757|gb|AGB76815.1| ring-hydroxylating dioxygenase, large terminal subunit
[Enterobacteriaceae bacterium strain FGI 57]
Length = 340
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 89/163 (54%), Gaps = 7/163 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIV++++ +G+++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVVWRNKDGQVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG + G G ++ +PA + P CVR+Y V+E+ G +++W P++
Sbjct: 76 CWYHGVEVAGNG---EVKDVPAVDRCPLVGQQCVRSYNVQEAHGAIFLWFGVTADQQPEE 132
Query: 201 LPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + E A + + ++ LEN+MDP H H
Sbjct: 133 LTFPEELADTESYSNFLCSAAWKCNYQYALENVMDPMHGTYLH 175
>gi|163745312|ref|ZP_02152672.1| vanillate O-demethylase oxygenase, putative [Oceanibulbus indolifex
HEL-45]
gi|161382130|gb|EDQ06539.1| vanillate O-demethylase oxygenase, putative [Oceanibulbus indolifex
HEL-45]
Length = 346
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 132/305 (43%), Gaps = 29/305 (9%)
Query: 100 LTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 159
+TV ++I +++ GEL +D CPHR LS+G++ +EC YHG F+ G+CV
Sbjct: 23 ITVLGEKICVFRSEAGELVGLEDACPHRKLPLSKGRIKGDTVECGYHGLTFDCAGQCV-- 80
Query: 160 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 218
P +IP +A V Y + E G+VW+WM +P + EN+ P + +
Sbjct: 81 -WAPGTGRIPSNAKVHAYPLHEKYGLVWIWMGNPALADPSDIFEIENYDNPDWGINRGEA 139
Query: 219 HELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKD 278
EL ++ ++ +NL+DP H+ H + A +D PL +T+ + RW +
Sbjct: 140 MELDCNYLLMCDNLLDPTHVAWVHQSSFAAAATKDT-PL--RITKTEEGIIVHRWMMDH- 195
Query: 279 EPLPNF---LRFEAPC-VLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATK 334
EP P + + FE C LQ+ S K FT P G V
Sbjct: 196 EPAPFYKKVVEFEGNCDRLQHYEVRYPSHALIKAVFTPAGTGGPDGPLHENTFVMDSYNF 255
Query: 335 RSPLAKLFPKWYFHQ-----------------NASKVFEQDMGFLSSQNEVLMKETVPTK 377
+P + ++Y+ Q + FE+D L+ + + +T P
Sbjct: 256 MTPTTERQTRYYWFQLRNIRPDDEALSKMMTEDVRHAFEEDRDVLNEVQKGMSNKTTPHI 315
Query: 378 ELYLN 382
+L ++
Sbjct: 316 DLPID 320
>gi|428310783|ref|YP_007121760.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
gi|428252395|gb|AFZ18354.1| ring-hydroxylating dioxygenase, large terminal subunit [Microcoleus
sp. PCC 7113]
Length = 340
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 8/190 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + L+K +P + L T+ + + +++D NG+ +DRC HR ++LS G++ G+++
Sbjct: 7 WYIIALSKQLPPNKILQRTLLGEWLAIFRDENGKAVALRDRCMHRNSRLSCGKVRQGKIQ 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 200
C YHGW ++ GK + +P D + + V++Y+ KE G ++V +S P
Sbjct: 67 CPYHGWIYDNTGKIMAVPSEGKDFQPLSTRQVKSYQTKEQDGYIYVQLSDNKSEEFAPFA 126
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
+P+++ PG++ V I+ + + EN +D H H T+++ QPL
Sbjct: 127 MPYYQ---EPGWETVRVINRFRNNVTNCAENFIDIPHTAFVHPGVFRTSRQ---QPLKMS 180
Query: 261 VTERTDRGFA 270
V R F
Sbjct: 181 VERRNGSTFV 190
>gi|258512017|ref|YP_003185451.1| Rieske (2Fe-2S) domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257478743|gb|ACV59062.1| Rieske (2Fe-2S) iron-sulphur domain protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
Length = 327
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 9/182 (4%)
Query: 67 ERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPH 126
ERR D + WY + + + PL V + +VL++D +G +R C H
Sbjct: 3 ERRAPVPSEDRVFPATWYAVCFSAQLTRRRPLAARVAGRDLVLFRDASGHVRALSRYCTH 62
Query: 127 RLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVV 186
R A L+ G+ G L C YHGWQF+G+G+C IP P D IP A R Y E G+
Sbjct: 63 RGADLALGRAEGGHLACAYHGWQFQGDGRCTLIPAHP-DRPIPDFAHNRAYPACERGGIA 121
Query: 187 WVWMSQKT-PPNPDKLPWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
WV++ +T PP P + + ++DV H + ++E+++D AH+ H
Sbjct: 122 WVYLGGETSPPEPRVFSELTDGSYRLVPYEDVWQAHL-----TRVVESVLDVAHLAFVHR 176
Query: 244 RT 245
+T
Sbjct: 177 KT 178
>gi|302838785|ref|XP_002950950.1| hypothetical protein VOLCADRAFT_34413 [Volvox carteri f.
nagariensis]
gi|300263645|gb|EFJ47844.1| hypothetical protein VOLCADRAFT_34413 [Volvox carteri f.
nagariensis]
Length = 200
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 78/165 (47%), Gaps = 47/165 (28%)
Query: 71 ERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAK 130
E + A + WTE+WYP+ D+P P+ ++FD ++V++ GNG C D CPHR A
Sbjct: 37 EPKQATFSWTEQWYPVGFLVDLPATEPIPFSLFDTKLVVWC-GNGRWGCMADECPHRRAP 95
Query: 131 LSEGQLI------------------------------DGR------LECLYHGWQFEGEG 154
LS G+L DGR LEC YHGWQF+G+G
Sbjct: 96 LSRGRLYEETPRHRQPPVAAAAAPPAATGCAAASSDGDGRRGRTFLLECAYHGWQFDGKG 155
Query: 155 KCVKIPQLPADAKIPRS----------ACVRTYEVKESQGVVWVW 189
+CV++PQ+ P S A + Y +QG++WVW
Sbjct: 156 RCVRLPQMLPPGYSPHSTNNKQPATPAAKLEAYPTAVAQGMLWVW 200
>gi|186473057|ref|YP_001860399.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia phymatum
STM815]
gi|184195389|gb|ACC73353.1| Rieske (2Fe-2S) domain protein [Burkholderia phymatum STM815]
Length = 362
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 7/172 (4%)
Query: 71 ERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAK 130
ER + +Y WYP+ + V +AP+GLT +QIVL++D G++ +DRCPHR A+
Sbjct: 19 ERGIKNY-----WYPVAPSWQV-SNAPIGLTRLSEQIVLWRDQEGKVHALEDRCPHRGAR 72
Query: 131 LSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWM 190
LS G + R+ C YHG + +G G +P + A + CV++Y V+E G +++W
Sbjct: 73 LSLGWNLGNRVACWYHGIEVDGSGTVRSVPAVSA-CPLEGQKCVKSYPVEEHAGAIFLWF 131
Query: 191 SQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
P L + + + ++ ++N+MDP H H
Sbjct: 132 GDDAHREPTPLVLPDELVAAEYSQFLCVSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|443316513|ref|ZP_21045954.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
gi|442783877|gb|ELR93776.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 6406]
Length = 337
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 96/189 (50%), Gaps = 11/189 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + + + P + + +VL+ D G+ +DRC HR AKLS G++ GR+
Sbjct: 13 WYPV-MPRQRLAEGPQTFELLGESLVLWLDQQGQPAAVRDRCCHRTAKLSLGRVDQGRIC 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F+ G CV++PQL ADA IP V Y E G VWV + P D +P
Sbjct: 72 CPYHGWEFDPSGACVRVPQLKADAAIPAHYRVAAYRCTERYGYVWVCLED---PLLD-VP 127
Query: 203 WFENFARPGFQDVSTIHELPYDHSIL--LENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
+ P ++ + +E P+ + L +EN +D AH H T+ + P E
Sbjct: 128 QIDEAEDPNYRLIQEFYE-PWQCAGLRVMENELDLAHPTFVH--TETFGSEDHPTPDKLE 184
Query: 261 VTERTDRGF 269
+TE TD G
Sbjct: 185 ITE-TDWGI 192
>gi|332286029|ref|YP_004417940.1| vanillate O-demethylase oxygenase [Pusillimonas sp. T7-7]
gi|330429982|gb|AEC21316.1| vanillate O-demethylase oxygenase, putative [Pusillimonas sp. T7-7]
Length = 343
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 17/208 (8%)
Query: 99 GLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVK 158
+ V + IVLY+ +G + +D CPHR LS G+L +EC YHG F+ G C
Sbjct: 22 AVKVLGEDIVLYRAQDGGVVALEDACPHRKLPLSMGRLKGDEVECGYHGLVFDCTGVCTH 81
Query: 159 IPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGF----QD 214
P + + P++A VR+Y V E G+VW+WM T NP + E++ P + D
Sbjct: 82 APGM---GRPPKAAVVRSYPVAERYGLVWIWMGDPTLANPADIIEVEHWGDPAWGLNQGD 138
Query: 215 VSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRG-FAGRW 273
+H ++ L +NL+DP+H+ H +T + + +PL T+ D G RW
Sbjct: 139 AMLVH---CNYLYLTDNLLDPSHVSWVH-QTSFGSASLIGEPLK---TQINDNGVLVSRW 191
Query: 274 GKEKDEP--LPNFLRFEAPCVLQNNREL 299
+ + F++F+ C + + E+
Sbjct: 192 MRNVEVAPFYAKFVKFDGRCDRKQHYEV 219
>gi|240138298|ref|YP_002962770.1| rieske 2Fe-2S family protein [Methylobacterium extorquens AM1]
gi|240008267|gb|ACS39493.1| rieske 2Fe-2S family protein [Methylobacterium extorquens AM1]
Length = 357
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 10/192 (5%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLID 138
W WY D+ D P T+ ++IVL+ DG GE DRC HR A+LS+G D
Sbjct: 9 WRHYWYATLRLSDL-TDGPKPFTLMGERIVLFLDGEGEPAAMMDRCCHRTARLSKGWCED 67
Query: 139 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
G + C YHGW ++ G +IPQ + +PR A V++Y G WV + +
Sbjct: 68 GLIVCGYHGWAYDRHGALARIPQFSPEQVVPRLA-VKSYHCTAKYGYAWVCLEEPYA--- 123
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPL 257
+P PG++ + H++ + L+EN D AH H T + P
Sbjct: 124 -AIPEIPEDTMPGYRRIQQFHDVWKTSPLRLMENSFDNAHFAFVHQNT--FGQISQPIPE 180
Query: 258 GFEVTERTDRGF 269
+E+TE T+ GF
Sbjct: 181 KYEITE-TEYGF 191
>gi|218529996|ref|YP_002420812.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium
extorquens CM4]
gi|218522299|gb|ACK82884.1| Rieske (2Fe-2S) domain protein [Methylobacterium extorquens CM4]
Length = 357
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 10/192 (5%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLID 138
W WY D+ D P T+ ++IVL+ DG GE DRC HR A+LS+G D
Sbjct: 9 WRHYWYATLRLSDLAD-GPKPFTLMGERIVLFLDGEGEPAAMMDRCCHRTARLSKGWCED 67
Query: 139 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
G + C YHGW ++ G +IPQ + +PR A V++Y G WV + +
Sbjct: 68 GLIVCGYHGWAYDRHGALARIPQFSPEQVVPRLA-VKSYHCTAKYGYAWVCLEEPYA--- 123
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPL 257
+P PG++ + H++ + L+EN D AH H T + P
Sbjct: 124 -AIPEIPEDTMPGYRRIQQFHDVWKTSPLRLMENSFDNAHFAFVHQNT--FGQISQPIPE 180
Query: 258 GFEVTERTDRGF 269
+E+TE T+ GF
Sbjct: 181 KYEITE-TEYGF 191
>gi|418061853|ref|ZP_12699685.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methylobacterium
extorquens DSM 13060]
gi|373564597|gb|EHP90694.1| Rieske (2Fe-2S) iron-sulfur domain protein [Methylobacterium
extorquens DSM 13060]
Length = 357
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 10/192 (5%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLID 138
W WY D+ D P T+ ++IVL+ DG GE DRC HR A+LS+G D
Sbjct: 9 WRHYWYATLRLSDL-TDGPKPFTLMGERIVLFLDGEGEPAAMMDRCCHRTARLSKGWCED 67
Query: 139 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
G + C YHGW ++ G +IPQ + +PR A V++Y G WV + +
Sbjct: 68 GLIVCGYHGWAYDRHGALARIPQFSPEQVVPRLA-VKSYHCTAKYGYAWVCLEEPYA--- 123
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPL 257
+P PG++ + H++ + L+EN D AH H T + P
Sbjct: 124 -AIPEIPEDTMPGYRRIQQFHDVWKTSPLRLMENSFDNAHFAFVHQNT--FGQISQPIPE 180
Query: 258 GFEVTERTDRGF 269
+E+TE T+ GF
Sbjct: 181 KYEITE-TEYGF 191
>gi|288961232|ref|YP_003451571.1| vanillate monooxygenase [Azospirillum sp. B510]
gi|288913540|dbj|BAI75027.1| vanillate monooxygenase [Azospirillum sp. B510]
Length = 384
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 133/323 (41%), Gaps = 31/323 (9%)
Query: 98 LGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCV 157
L T+ +++VLY+ + + +D C HRL LS+G+L L C YHG F EG+CV
Sbjct: 56 LPRTICGKKLVLYRRSDDSVTALEDACWHRLLPLSKGRLEGDNLVCGYHGLVFNPEGRCV 115
Query: 158 KIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVST 217
+P+ I SACVR Y V E WVWM +P K+P P +
Sbjct: 116 G---MPSQETINPSACVRRYPVVERHRFAWVWMGDPALADPAKIPDMHWNHDPAWAGDGR 172
Query: 218 IHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEK 277
+ + D+ ++L+NLMD H H + R A+ FE T RW ++
Sbjct: 173 LIRVKCDYRLVLDNLMDLTHETFVHSSS--IGNRAVAE-APFETTHNDRFVTVTRWMRDI 229
Query: 278 DEP--------------LPNFLRFEAPCVLQNNRELVDSKTG-----EKHYFTGLFLCRP 318
+ P +RFEAPC + + + + TG G L
Sbjct: 230 EAPPFWAKQLGKPGNVDRWQIIRFEAPCTITIDVGVAPTGTGAPEGDRSQGVNGFVLNTI 289
Query: 319 TGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKE 378
T + + + + L + +++F +D L +Q + + + P +
Sbjct: 290 TPETEKTCHYFWAFCRNYKLGEQRLTAELRDGVTRIFGEDEIILEAQQQAI--DDNPDRA 347
Query: 379 LY-LNLRSSDTWVAEYRKWMDKV 400
Y LN+ + W R+ +D++
Sbjct: 348 FYNLNIDAGAMW---SRRLIDRM 367
>gi|295700277|ref|YP_003608170.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1002]
gi|295439490|gb|ADG18659.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1002]
Length = 417
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 91/172 (52%), Gaps = 10/172 (5%)
Query: 83 WYPLYLTKDV--PDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
W P L+ ++ P AP + + + +V ++D +G++ +++CPHR A L+ G +G
Sbjct: 27 WIPALLSSEIQEPGGAPKRVRLLGEDLVAFRDSDGKVGLLEEQCPHRRASLALGDNSEGG 86
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
L CLYHGW+F +G+C+ P P D+K+ Y V+E GV+W +M +P K
Sbjct: 87 LRCLYHGWKFAVDGQCMDTPTEPEDSKLCSRIKAVAYPVREVAGVIWTYMG-----DPAK 141
Query: 201 LPWFENFARPGF--QDVSTIHELPY-DHSILLENLMDPAHIPISHDRTDWTA 249
+P F +F + + V+ L +++ +E +D AH + H W+A
Sbjct: 142 VPQFPDFDFLSYPAEKVAAFKVLEDCNYAQAVEGTIDSAHAGVLHREQPWSA 193
>gi|254560840|ref|YP_003067935.1| rieske 2Fe-2S family protein [Methylobacterium extorquens DM4]
gi|254268118|emb|CAX23994.1| rieske 2Fe-2S family protein [Methylobacterium extorquens DM4]
Length = 357
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 10/192 (5%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLID 138
W WY D+ D P T+ ++IVL+ DG GE DRC HR A+LS+G D
Sbjct: 9 WRHYWYATLRLSDLAD-GPKPFTLMGERIVLFLDGEGEPAAMMDRCCHRTARLSKGWCED 67
Query: 139 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
G + C YHGW ++ G +IPQ + +PR A V++Y G WV + +
Sbjct: 68 GLIVCGYHGWAYDRHGALARIPQFSPEQVVPRLA-VKSYHCTAKYGYAWVCLEEPYA--- 123
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPL 257
+P PG++ + H++ + L+EN D AH H T + P
Sbjct: 124 -AIPEIPEDTMPGYRRIQQFHDVWKTSPLRLMENSFDNAHFAFVHQNT--FGQISQPIPE 180
Query: 258 GFEVTERTDRGF 269
+E+TE T+ GF
Sbjct: 181 KYEITE-TEYGF 191
>gi|224148289|ref|XP_002336625.1| predicted protein [Populus trichocarpa]
gi|222836377|gb|EEE74784.1| predicted protein [Populus trichocarpa]
Length = 144
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 67 ERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCP 125
E Q +DW +WYP+ D+ P TV +V++ D N E + + D CP
Sbjct: 15 ELEAVSQEEKFDWYAQWYPVMPVCDLDKRVPHAKTVMGLDLVVWWDRNESEWKVFDDSCP 74
Query: 126 HRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKE 181
HRLA LSEG++ GRL+C+YHGW F G G C IPQ P D ACV Y
Sbjct: 75 HRLAPLSEGRIDQWGRLQCVYHGWCFNGSGNCKFIPQAPPDGPPVHTSMKACVAVYPSTV 134
Query: 182 SQGVVWVW 189
G+VW W
Sbjct: 135 HHGIVWFW 142
>gi|167572693|ref|ZP_02365567.1| iron-sulfur cluster-binding protein, rieske family [Burkholderia
oklahomensis C6786]
Length = 338
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V AP+G+T +QIVL++D G++ +DRCPHR A+LS G + +
Sbjct: 26 WYPVAPSWQV-SSAPVGMTRLSEQIVLWRDQQGQVHALEDRCPHRGARLSLGWNLGDHVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G G K+P + ++ + ACV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQACVKSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ P + + ++ ++N+MDP H H
Sbjct: 144 LPDELVAPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH 183
>gi|402568505|ref|YP_006617849.1| Rieske (2Fe-2S) protein [Burkholderia cepacia GG4]
gi|402249702|gb|AFQ50155.1| Rieske (2Fe-2S) protein [Burkholderia cepacia GG4]
Length = 356
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V +AP+GLT +QIVL++D G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-SNAPVGLTRLSEQIVLWRDHEGKVHALEDRCPHRGARLSLGWNLGGNIA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G ++P + ++ + + CV++Y V+E G +++W + P L
Sbjct: 85 CWYHGVEIDGGGTVNRVPAV-SNCPLEGTKCVKSYPVEEKAGAIFLWFGDEAHGEPAPLN 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVADEYGHFLCVSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|170722290|ref|YP_001749978.1| vanillate monooxygenase [Pseudomonas putida W619]
gi|169760293|gb|ACA73609.1| Vanillate monooxygenase [Pseudomonas putida W619]
Length = 358
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 9/167 (5%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WY L ++ D P+G T+ ++ +V+++ +G++ ++RC HR LS+G L G L
Sbjct: 25 QWYVAALGWEL-KDRPVGRTLLNKSVVMFRTADGKVAALENRCCHRALPLSDGTLEAGGL 83
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHG F EGKC++I P KIP A V + V E +VW+W + P P
Sbjct: 84 RCGYHGLLFNDEGKCIEI---PGQDKIPSKAKVAAFHVVEKDQIVWIWFASPEHPEPTTE 140
Query: 202 PWFENFARPG---FQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
P + G F ++ PY ++ +NLMD +H+ H RT
Sbjct: 141 PPSYDIHSSGDYLFDGDVYHYDAPY--QLIHDNLMDLSHLGYVHLRT 185
>gi|456357222|dbj|BAM91667.1| vanillate O-demethylase oxygenase, iron-sulfur subunit, vanA-like
protein [Agromonas oligotrophica S58]
Length = 347
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 141/341 (41%), Gaps = 38/341 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +V A L T+ + +V+Y+ +G + +D C HRL LS+G+L +
Sbjct: 10 WYAAAWDAEV-KQALLPRTICGKHVVMYRKADGTVAALEDACWHRLVPLSKGRLEGDTVV 68
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F +G+C +P+ I SACVR Y E +W+WM +P +P
Sbjct: 69 CGYHGLKFNPQGRCTF---MPSQETINPSACVRAYPAVERHRFIWLWMGDPALADPATIP 125
Query: 203 ---WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
W + A G D TIH + D+ ++++NLMD H H + E F
Sbjct: 126 DMHWNHDPAWAG--DGKTIH-VNCDYRLVVDNLMDLTHETFVHGS---SIGNEALTEAPF 179
Query: 260 EVTERTDRGFAGRW--------------GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG 305
+VT RW GKE +RFEAPC + + + + TG
Sbjct: 180 DVTHGERTATVTRWMHGIEPPPFWARQLGKEGLVDRWQIIRFEAPCTVTIDVGVAPTGTG 239
Query: 306 -----EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMG 360
G+ L T + + + + +++ + S +F +D
Sbjct: 240 APEGDRSQGVNGMVLNTITPETERTCHYFWAFARNYQISEQRLTTEIREGVSGIFREDEL 299
Query: 361 FLSSQNEVLMKETVPTKELY-LNLRSSDTWVAEYRKWMDKV 400
L +Q + + P + Y LN+ + W R+ +D++
Sbjct: 300 ILEAQQRAM--DENPGRVFYNLNIDAGAMWA---RRIIDRM 335
>gi|75462888|sp|Q9AHG3.1|TSAM2_COMTE RecName: Full=Putative toluene-4-sulfonate monooxygenase system
iron-sulfur subunit TsaM2; AltName:
Full=Toluenesulfonate methyl-monooxygenase oxygenase
component TsaM2
gi|13661652|gb|AAK37996.1| monooxygenase TsaM2 [Comamonas testosteroni]
Length = 346
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 91/197 (46%), Gaps = 6/197 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + D PL T ++++VL++ +G +DRC HRLA LS G + D +
Sbjct: 7 WYVAGMATDC-SRKPLARTFLNEKVVLFRTHDGHAVALEDRCCHRLAPLSLGDVEDAGIR 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL- 201
C YHG F G CV+I P +IP CVR + + E G++W+WM NPD +
Sbjct: 66 CRYHGMVFNASGACVEI---PGQEQIPPGMCVRRFPLVERHGLLWIWMGDPARANPDDIV 122
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
N A D IH ++ ++++NL+D H+ H T T +P+
Sbjct: 123 DELWNGAPEWRTDSGYIH-YQANYQLIVDNLLDFTHLAWVHPTTLGTDSAASLKPVIERD 181
Query: 262 TERTDRGFAGRWGKEKD 278
T T + RW D
Sbjct: 182 TTGTGKLTITRWYLNDD 198
>gi|206563700|ref|YP_002234463.1| [2Fe-2S]-binding protein [Burkholderia cenocepacia J2315]
gi|421867809|ref|ZP_16299462.1| Vanillate O-demethylase oxygenase subunit [Burkholderia cenocepacia
H111]
gi|444364026|ref|ZP_21164381.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
gi|444372565|ref|ZP_21172008.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|198039740|emb|CAR55710.1| [2Fe-2S]-binding protein [Burkholderia cenocepacia J2315]
gi|358072222|emb|CCE50340.1| Vanillate O-demethylase oxygenase subunit [Burkholderia cenocepacia
H111]
gi|443593327|gb|ELT62073.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|443593707|gb|ELT62420.1| Rieske [2Fe-2S] domain protein [Burkholderia cenocepacia BC7]
Length = 356
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V +AP+GLT +QIVL++D +G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-SNAPVGLTRLSEQIVLWRDHDGKVHALEDRCPHRGARLSLGWNLGGNIA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G ++P + ++ + + CV++Y V+E G +++W + P L
Sbjct: 85 CWYHGIEVDGGGTVNRVPAV-SNCPLEGTKCVKSYPVEEKAGAIFLWFGDEAHGEPAPLN 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVAEEYGHFLCVSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|107026012|ref|YP_623523.1| Rieske (2Fe-2S) protein [Burkholderia cenocepacia AU 1054]
gi|116692803|ref|YP_838336.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105895386|gb|ABF78550.1| Rieske (2Fe-2S) region [Burkholderia cenocepacia AU 1054]
gi|116650803|gb|ABK11443.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia HI2424]
Length = 356
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 86/160 (53%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V + AP+GLT +QIVL++D +G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQVSN-APVGLTRLSEQIVLWRDHDGKVHALEDRCPHRGARLSLGWNLGGNIA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G ++P + ++ + + CV++Y V+E G +++W + P L
Sbjct: 85 CWYHGIEVDGGGTVNRVPAV-SNCPLEGTKCVKSYPVEEKAGAIFLWFGDEAHGEPAPLN 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVADEYAHFLCVSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|420251385|ref|ZP_14754562.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
gi|398057977|gb|EJL49901.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
Length = 349
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++DV D + + ++LY+ +G DRCPHR A LS G+ + +E
Sbjct: 8 WYAAAWSRDVGADLST-RELLGEPMLLYRKHDGAPVAMIDRCPHRFAPLSMGKRVGDGIE 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG QF+ G C K P D +IP A VR++ ++ G+VW+W + + N +P
Sbjct: 67 CGYHGLQFDCSGACSKNPH--GDGRIPPGARVRSFPAEDRHGLVWIWAGEPSRANASLIP 124
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
F + P + V + ++++NLMD +H+ H
Sbjct: 125 DFSHLVSPRLKTVGDEMTQKAHYELVVDNLMDLSHVNYLH 164
>gi|229086002|ref|ZP_04218224.1| hypothetical protein bcere0022_26020 [Bacillus cereus Rock3-44]
gi|228697313|gb|EEL50076.1| hypothetical protein bcere0022_26020 [Bacillus cereus Rock3-44]
Length = 324
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 96/184 (52%), Gaps = 13/184 (7%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +KDV D P+ + + +VL+++ N ++ CPHR A LS G + GR+
Sbjct: 18 WYAVCFSKDVID-KPIKRKIVGKDLVLFRNENHNIQAVHAYCPHRGADLSLGSIRKGRVT 76
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F+G G CV IP P+ +IP+ A ++Y V E G++WV+ + + ++LP
Sbjct: 77 CAYHGWEFDGGGTCVCIPSQPS-KQIPKFAHTKSYPVMEKAGLIWVYPECEI--SKEELP 133
Query: 203 WFENFARPGFQDVSTIHELPYD------HSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
E F +D++ + PY + ++E+++D H+ H T + +
Sbjct: 134 ILEIFEE--VEDINFVFS-PYQAKWNAHFTRVVESVLDVVHLSFVHKNTIGKGSNPELEE 190
Query: 257 LGFE 260
L E
Sbjct: 191 LQIE 194
>gi|148554478|ref|YP_001262060.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499668|gb|ABQ67922.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 347
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 8/167 (4%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG 139
+WY ++D+ DAP+ + + IVL++ +G + D CPHR L G+++DG
Sbjct: 5 VNQWYGAIWSQDL-GDAPVARRLLGKPIVLFRTDDG-VAALADVCPHRFVPLHLGKVVDG 62
Query: 140 R-LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
R + C YHG +F+ G CV+ P +IP +A V +++V E G+VW+WM ++ +P
Sbjct: 63 RAIRCGYHGLEFDRTGACVRNPHNAG--RIPPAAKVESHQVAERHGMVWIWMGERD-ADP 119
Query: 199 DKLP--WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
+P F + A P E+ ++ I++ENL+D +H I HD
Sbjct: 120 SLIPDYSFLDSADPQHISARDHLEIRSNYRIVVENLLDLSHASILHD 166
>gi|374573646|ref|ZP_09646742.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM471]
gi|374421967|gb|EHR01500.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. WSM471]
Length = 353
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 136/332 (40%), Gaps = 41/332 (12%)
Query: 96 APLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 155
A L T+ + +V+Y+ +G + +D C HRL LS+G+L + C YHG ++ +G+
Sbjct: 22 ALLPRTICGKHVVMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGR 81
Query: 156 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP---WFENFARPGF 212
C +P+ I SACVR Y V E +W+WM +P +P W + A G
Sbjct: 82 CTF---MPSQETINPSACVRAYPVVERHRYIWLWMGDPALADPALVPDLHWNHDPAWAG- 137
Query: 213 QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGR 272
D TIH + D+ ++L+NLMD H H + E F+VT R
Sbjct: 138 -DGKTIH-VNCDYRLVLDNLMDLTHETFVHGS---SIGNEAVAEAPFDVTHGEKTVTVTR 192
Query: 273 WGKEKDEP------------------LPNFLRFEAPCVLQNNRELVDSKTG-----EKHY 309
W + + P +RFEAPC + + + + TG
Sbjct: 193 WMRGIEAPPFWAKQLGKEPGKSGLVDRWQIIRFEAPCTIAIDVGVAPTGTGAPEGDRSQG 252
Query: 310 FTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVL 369
G L T + + + + L + + S +F +D L +Q +
Sbjct: 253 VNGFVLNTITPETEKTCHYFWAFVRNYQLGEQRITTEIREGVSGIFHEDELILEAQQRAM 312
Query: 370 MKETVPTKELY-LNLRSSDTWVAEYRKWMDKV 400
+ P + Y LN+ + W RK +DK+
Sbjct: 313 --DENPDRIFYNLNIDAGAMWT---RKLIDKM 339
>gi|167645102|ref|YP_001682765.1| vanillate monooxygenase [Caulobacter sp. K31]
gi|167347532|gb|ABZ70267.1| Vanillate monooxygenase [Caulobacter sp. K31]
Length = 350
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 137/331 (41%), Gaps = 53/331 (16%)
Query: 101 TVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 160
T+ +++IVL++ NG+ C +D C HRL LS G+L ++C YHG F G+CV+
Sbjct: 29 TICNKKIVLFRKENGQAVCLEDACWHRLLPLSMGRLKGDDVQCGYHGLVFNEHGRCVR-- 86
Query: 161 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHE 220
+P+ I SACVR++ + E VW+W +P +P P + +
Sbjct: 87 -MPSQETINPSACVRSFPLVERHRFVWIWPGDPALADPALVPDLHWNHDPAWAGDGKVIH 145
Query: 221 LPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRW------- 273
D+ ++++NLMD H H + +A FEVT RW
Sbjct: 146 AKCDYRLIVDNLMDLTHETYIHGSSIGNDAVAEAP---FEVTTGDKTAMVTRWMIDIEPP 202
Query: 274 -------GKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTG---QGK 323
GK + +RFEAPC + + + + TG P G QG
Sbjct: 203 PFWRQQLGKPGNVDRWQIIRFEAPCTVAIDVGVAPTGTGA-----------PRGDRSQGV 251
Query: 324 SMLIVR------------FGATKRS-PLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLM 370
SM+++ F A R L + + +KVF +D + +Q +
Sbjct: 252 SMVVINTITPATDKTCHYFWANVRDYQLGEQKVTTQIREAITKVFAEDEVIVEAQQRAI- 310
Query: 371 KETVPTKELY-LNLRSSDTWVAEYRKWMDKV 400
+ P Y LN+ + W R+ +D++
Sbjct: 311 -DDHPDHVFYNLNIDAGAMWA---RRLIDRM 337
>gi|388569563|ref|ZP_10155955.1| rieske (2fe-2S) iron-sulfur domain protein [Hydrogenophaga sp. PBC]
gi|388263312|gb|EIK88910.1| rieske (2fe-2S) iron-sulfur domain protein [Hydrogenophaga sp. PBC]
Length = 339
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 88/176 (50%), Gaps = 8/176 (4%)
Query: 95 DAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 154
D P T+ + IVL+ D +GE +DRC HR AKLS+G +G ++C YHGW + EG
Sbjct: 24 DGPQPFTLLGENIVLFLDEHGEPAALKDRCCHRTAKLSKGWCKNGNIQCGYHGWVYNREG 83
Query: 155 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD 214
+ V+IPQ AD +IP+ Y G WV + + P D +P F PG++
Sbjct: 84 RVVEIPQYGADREIPKDYGTPAYRCVARHGYAWVALEE---PEAD-IPEMPEFGAPGWRT 139
Query: 215 VSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGF 269
+ +E + LEN D +H H T A + +P +E+ E D+GF
Sbjct: 140 IFQFYETWQTSPVRALENSFDNSHFSFVHRATFGVAAQ--PKPSKYELIE-NDQGF 192
>gi|238751666|ref|ZP_04613155.1| Rieske (2Fe-2S) domain protein [Yersinia rohdei ATCC 43380]
gi|238710076|gb|EEQ02305.1| Rieske (2Fe-2S) domain protein [Yersinia rohdei ATCC 43380]
Length = 347
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 6/188 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V ++ P+G+T +QQIV+++D G + +DRCPHR A+LS G + R+
Sbjct: 24 WYPVLASWEVGNN-PVGITRLEQQIVVWRDSTGTIHALEDRCPHRGARLSMGWNLGDRIA 82
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G+G +P + + C+R+Y KE GVV+++ P +L
Sbjct: 83 CWYHGVEVGGDGTVKDVPAVDR-CPLVGQKCLRSYSAKEKYGVVFLYFGITADEEPTELT 141
Query: 203 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
+ + A + + ++ LEN+MDP H H + A+ + +
Sbjct: 142 FPQELADEVNYSNFLCTASWDCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMAL-- 199
Query: 262 TERTDRGF 269
E TD GF
Sbjct: 200 -ESTDSGF 206
>gi|427704114|ref|YP_007047336.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
gi|427347282|gb|AFY29995.1| ring-hydroxylating dioxygenase, large terminal subunit [Cyanobium
gracile PCC 6307]
Length = 335
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 2/168 (1%)
Query: 95 DAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 154
D P+ +T+ ++ +L++D G+ D C HR A L+ G + + C YHGW ++ +G
Sbjct: 20 DQPVSVTLLGRRYLLFRDTAGQAHALADYCAHRGASLARGWVEGSCVRCPYHGWSYDVDG 79
Query: 155 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD 214
CV+IP P IP A + T+ V+E G VW++ + + +P F +PG++
Sbjct: 80 HCVRIPADPPGTAIPALARMATFPVREQSGFVWIFPGEAGRASEVPIPPFPELNQPGWRA 139
Query: 215 VSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
VS + S ++E+ +D +H P H + REDA E+
Sbjct: 140 VSGSYTWNAHFSRVVESALDTSHAPFVH--RPFFGNREDASVESLEIV 185
>gi|386288171|ref|ZP_10065332.1| vanillate monooxygenase [gamma proteobacterium BDW918]
gi|385278866|gb|EIF42817.1| vanillate monooxygenase [gamma proteobacterium BDW918]
Length = 351
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + D+ P G+ + +++IVL++D G CPHR A LS+G+++ R++
Sbjct: 8 WYCAGWSADL-GGQPTGIKILNEEIVLFRDSEGRATALSGICPHRFAPLSKGKVVGDRIQ 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F EG+C+ P IP A +++Y + E G +W+WM + K+P
Sbjct: 67 CPYHGLEFNQEGRCMLNPH--GRGLIPERAKLQSYPLAERHGALWIWMGDPGAADESKIP 124
Query: 203 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
F+ + R + + + + ++++NL+D H H T
Sbjct: 125 EFDFVSDRESWAGATGYLRMDASYELVIDNLLDLTHADYIHGST 168
>gi|148556298|ref|YP_001263880.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501488|gb|ABQ69742.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 348
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 88/165 (53%), Gaps = 9/165 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI-DGRL 141
WY ++D+ A + + +V Y+D G+ D CPHR A LS+G+L+ G +
Sbjct: 8 WYVALWSEDLHSGAIENRIILSEPVVFYRDQQGQPVALFDICPHRFAPLSKGRLLPGGGI 67
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHG +F +G C++ P +IP A V+ Y + E ++W+WM +T P+P +
Sbjct: 68 ACGYHGLEFGADGTCIRNPH---GDRIPNRAQVKRYPLVEQDSLIWIWMGDQT-PDPALI 123
Query: 202 PWFENFARPGFQDVSTIHE---LPYDHSILLENLMDPAHIPISHD 243
P ++ F P T E +P D+ ++++NL+D +HI HD
Sbjct: 124 PRYD-FLDPVNGYTVTSRETLTMPCDYRLIVDNLLDLSHINFLHD 167
>gi|115358852|ref|YP_775990.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia ambifaria
AMMD]
gi|115284140|gb|ABI89656.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria AMMD]
Length = 356
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 10/187 (5%)
Query: 56 HKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG 115
H+V P A RG + +Y WYP+ + V +AP+GLT +QIVL++D G
Sbjct: 7 HEVQHDPVRAYLDRG---IKNY-----WYPVAPSWQV-SNAPVGLTRLSEQIVLWRDHEG 57
Query: 116 ELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVR 175
++ +DRCPHR A+LS G + G + C YHG + +G G ++P + ++ + CV+
Sbjct: 58 KVHALEDRCPHRGARLSLGWNLGGNIACWYHGVEIDGGGTVNRVPAV-SNCPLEGMKCVK 116
Query: 176 TYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDP 235
+Y V+E G +++W + P L E + + ++ ++N+MDP
Sbjct: 117 SYPVEEKAGAIFLWFGDEAHGEPAPLNLPEELVDAEYGHFLCVSNWKCNYQYAIDNVMDP 176
Query: 236 AHIPISH 242
H H
Sbjct: 177 MHGAYLH 183
>gi|170698964|ref|ZP_02890023.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria IOP40-10]
gi|170136144|gb|EDT04413.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria IOP40-10]
Length = 356
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 10/187 (5%)
Query: 56 HKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG 115
H+V P A RG + +Y WYP+ + V +AP+GLT +QIVL++D G
Sbjct: 7 HEVQPDPVRAYLDRG---IKNY-----WYPVAPSWQV-SNAPVGLTRLSEQIVLWRDHEG 57
Query: 116 ELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVR 175
++ +DRCPHR A+LS G + G + C YHG + +G G ++P + ++ + CV+
Sbjct: 58 KVHALEDRCPHRGARLSLGWNLGGNIACWYHGVEIDGGGTVNRVPAV-SNCPLEGMKCVK 116
Query: 176 TYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDP 235
+Y V+E G +++W + P L E + + ++ ++N+MDP
Sbjct: 117 SYPVEEKAGAIFLWFGDEAHGEPAPLNLPEELVDAEYGHFLCVSNWKCNYQYAIDNVMDP 176
Query: 236 AHIPISH 242
H H
Sbjct: 177 MHGAYLH 183
>gi|254415185|ref|ZP_05028947.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196177991|gb|EDX72993.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 353
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + L + ++ Q I +Y+ G+L ++ CPH+ +L +G + D L
Sbjct: 26 WYSVAWANQIKPGQILPVKIWQQSIAVYRTPTGQLHALENACPHKGVELHKGIVQDEYLA 85
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQF+G GKCV IP P + K+P A VRTY ++E ++W++ +LP
Sbjct: 86 CPYHGWQFDGAGKCVGIPYFPPEQKLP-CAQVRTYPIQEKYKLIWIFPGDPALATTCQLP 144
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDW 247
F P + V + SI EN MD H + + W
Sbjct: 145 DMPEFDHPDWFMVPVSARMKSHFSICNENTMDVFHGFLHQNLQGW 189
>gi|148556318|ref|YP_001263900.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501508|gb|ABQ69762.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 342
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++P + + ++ I+L +DG GE+R ++RCPHR A LS G +E
Sbjct: 8 WYVAAWDDEIPAEGTFHRRILNEDILLARDGEGEVRALRNRCPHRFAPLSIGTRTGDAIE 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F +G+C+ P +IP +A V+TY V + W+WM +P +P
Sbjct: 68 CAYHGLRFGLDGRCLSNPH--GSGQIPANARVQTYPVVVRHLLAWIWMGDPDKADPSAIP 125
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
F P ++ + +N+MD HI H
Sbjct: 126 DLVGLDPERFAINRGYMHTPANYEYMADNIMDLGHIEFLH 165
>gi|386012094|ref|YP_005930371.1| Rieske 2Fe-2S family protein [Pseudomonas putida BIRD-1]
gi|313498800|gb|ADR60166.1| Rieske 2Fe-2S family protein [Pseudomonas putida BIRD-1]
Length = 341
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL-IDGRL 141
WY L L +D P T+ + +VL+K +G QDRC HR AKLS+G + +G +
Sbjct: 13 WYAL-LPMTALEDGPRPFTLLGEALVLWKRPDGTPVAMQDRCCHRTAKLSKGFVSAEGNI 71
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW+++ G CVKIPQ P A IP A V+ Y +E G WV + P +
Sbjct: 72 ACGYHGWEYDCTGTCVKIPQNPTGA-IPPGAAVKAYHCQEKYGYAWVSLDDPLQP----I 126
Query: 202 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
P F PG++ + +E + ++EN D +H H + QP +E
Sbjct: 127 PEFPEDGTPGYRRIFQFYEEWKTSPLRVMENSFDNSHFSFVHKAN--FGLFDQPQPASYE 184
Query: 261 VTERTDRGF 269
E TD GF
Sbjct: 185 FRE-TDYGF 192
>gi|254249517|ref|ZP_04942837.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
gi|124876018|gb|EAY66008.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
Length = 375
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 119/304 (39%), Gaps = 20/304 (6%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG 139
E+WY +V D P G V IVL++ +GE+ D+C HR +LS G++IDG
Sbjct: 31 VEQWYVASTEAEVKRDKPFGTRVLGLGIVLFRAADGEIVALVDQCVHRGTRLSAGKVIDG 90
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACV----RTYEVKESQGVVWVWMSQKTP 195
L C YHGW ++ G +IP + + + P R V G+VWV+ + P
Sbjct: 91 CLVCPYHGWHYDQHGSVTRIPSIDSASAEPTGTTYPYRQRRLPVLTRHGLVWVYRGRGDP 150
Query: 196 PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT--DWTAKRED 253
+ RP +Q I+ D L+EN MD H HDR T +R
Sbjct: 151 ALKRPFDMPHHGERP-WQSYYMINTFDGDLGALVENFMDVPHTVFVHDRIFRSSTGRRLR 209
Query: 254 A----QPLGFEVTERTDR---GFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE 306
A + EVT D G EPL + F AP V + D G
Sbjct: 210 ATVELKQQSVEVTYHDDGDKIGMLDWLTNPSREPLRHTDHFYAPNVTR-----CDYHWGS 264
Query: 307 KHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFP-KWYFHQNASKVFEQDMGFLSSQ 365
+ F + P +S + P A L K H V +QD+ + +
Sbjct: 265 RSSFLIISQITPLDTRRSRVYTYIAYRFALPAAVLRALKPLLHLYTHSVIQQDVRIMRAH 324
Query: 366 NEVL 369
E L
Sbjct: 325 REGL 328
>gi|339502337|ref|YP_004689757.1| vanillate O-demethylase oxygenase [Roseobacter litoralis Och 149]
gi|338756330|gb|AEI92794.1| vanillate O-demethylase oxygenase-like protein [Roseobacter
litoralis Och 149]
Length = 346
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 100 LTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 159
+TV ++I +++ GEL +D CPHR LS+G++ +EC YHG F G+CV
Sbjct: 23 ITVLGEKICVFRSEAGELVGLEDACPHRKLPLSKGRIKGDTVECGYHGLTFNCVGQCV-- 80
Query: 160 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 218
P IP +A V Y ++E G+VW+WM +P + EN+ P + +
Sbjct: 81 -WAPGSGGIPSNAKVHAYPLQEKYGLVWIWMGNPALADPADIFEIENYDNPAWGINRGAA 139
Query: 219 HELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRG-FAGRWGKEK 277
EL ++ ++ +NL+DP H+ H + A +D PL +TD G RW +
Sbjct: 140 MELDCNYLLMCDNLLDPTHVAWVHQSSFAAAATKDT-PLRI---TKTDEGVIVHRWMMDH 195
Query: 278 DEPLPNF---LRFEAPC 291
EP P + + FE C
Sbjct: 196 -EPAPFYKKVVEFEGNC 211
>gi|170736886|ref|YP_001778146.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169819074|gb|ACA93656.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia MC0-3]
Length = 373
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 119/304 (39%), Gaps = 20/304 (6%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG 139
E+WY +V D P G V IVL++ +GE+ D+C HR +LS G++IDG
Sbjct: 29 VEQWYVASTEAEVKRDKPFGTRVLGLGIVLFRAADGEIVALVDQCVHRGTRLSAGKVIDG 88
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACV----RTYEVKESQGVVWVWMSQKTP 195
L C YHGW ++ G +IP + + + P R V G+VWV+ + P
Sbjct: 89 CLVCPYHGWHYDQHGSVTRIPSIDSASAEPTGTTYPYRQRRLPVLTRHGLVWVYRGRGDP 148
Query: 196 PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT--DWTAKRED 253
+ RP +Q I+ D L+EN MD H HDR T +R
Sbjct: 149 ALKRPFDMPHHGERP-WQSYYMINTFDGDLGALVENFMDVPHTVFVHDRIFRSSTGRRLR 207
Query: 254 A----QPLGFEVTERTDR---GFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGE 306
A + EVT D G EPL + F AP V + D G
Sbjct: 208 ATVELKQQSVEVTYHDDGDKIGMLDWLTNPSREPLRHTDHFYAPNVTR-----CDYHWGS 262
Query: 307 KHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFP-KWYFHQNASKVFEQDMGFLSSQ 365
+ F + P +S + P A L K H V +QD+ + +
Sbjct: 263 RSSFLIISQITPLDTRRSRVYTYIAYRFALPAAVLRALKPLLHLYTHSVIQQDVRIMRAH 322
Query: 366 NEVL 369
E L
Sbjct: 323 REGL 326
>gi|326328839|ref|ZP_08195174.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase)
[Nocardioidaceae bacterium Broad-1]
gi|325953370|gb|EGD45375.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase)
[Nocardioidaceae bacterium Broad-1]
Length = 367
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 142/351 (40%), Gaps = 40/351 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +V PL T+ + L+++ +G D C HRLA LS+G+++ ++
Sbjct: 23 WYVAAWDHEVTAKQPLARTIAGVPLALWRNSDGRAVALADACWHRLAPLSKGKVLGDEIQ 82
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG ++ G+C +PA I SA V +Y V E VWVW+ +P +P
Sbjct: 83 CPYHGLRYNSAGRCTS---MPAQETINPSAIVPSYPVVERYRYVWVWVGDPDLADPATVP 139
Query: 203 WFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
P + D TI+ P ++ ++L+NLMD H H + + +A+ FEV
Sbjct: 140 DMHQMDSPDWAGDGETIYA-PCNYQLVLDNLMDLTHEEFVHSSSIGQDELSEAE---FEV 195
Query: 262 TERTDRGFAGRWGKEKDEP----------LPNF---------LRFEAPCVLQNNRELVDS 302
+ RW ++ D P P F + FEAP + + + +
Sbjct: 196 SHDDRHVTVTRWMRDIDAPPFWLKNMRDKFPGFTGKVDRWQIIHFEAPSTICIDVGVAKA 255
Query: 303 KTG-----EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQ 357
TG G + T + + + L Q VF +
Sbjct: 256 GTGAPEGDRSQGVNGFVMNTITPETARTSHYFWAFMRNYRLESQTITTQLRQGVHGVFGE 315
Query: 358 DMGFLSSQNEVLMKETVPTKELY-LNLRSSDTWVAEYRKWMDKV--GHGMP 405
D L++Q + + P E Y LN+ + WV R+ +D++ G+P
Sbjct: 316 DEEMLAAQQRAI--DANPDHEFYSLNIDAGGMWV---RRILDRMLQAEGLP 361
>gi|254183352|ref|ZP_04889944.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1655]
gi|184213885|gb|EDU10928.1| iron-sulfur cluster-binding protein, Rieske family [Burkholderia
pseudomallei 1655]
Length = 355
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V AP+G+ +QIVL++D G + +DRCPHR A+LS G + R+
Sbjct: 26 WYPVAPSWQV-SSAPVGIIRLSEQIVLWRDREGNVHALEDRCPHRGARLSLGWNLGDRVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G G K+P + ++ + ACV++Y V+E G +++W P L
Sbjct: 85 CWYHGVEVNGGGTVTKVPAV-SNCPLEGQACVKSYPVEERAGAIFLWFGDDAHREPAPLV 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ P + + ++ ++N+MDP H H
Sbjct: 144 LPDELVAPEYAQFVCVSNWTCNYQYAIDNVMDPMHGAYLH 183
>gi|377808530|ref|YP_004979722.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia sp.
YI23]
gi|357939727|gb|AET93284.1| Rieske family iron-sulfur cluster-binding protein [Burkholderia sp.
YI23]
Length = 353
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V +AP+GLT QIVL++D G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-GNAPIGLTRLGDQIVLWRDNEGKVHALEDRCPHRGARLSLGWNLGGSVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G K+P + A + CV++Y V+E G ++W P L
Sbjct: 85 CWYHGIEIDGSGTVQKVPAVSA-CPLEGQKCVKSYPVEEHAGATFLWFGDDANAEPAPLV 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVGDEYASFLCMSHWKCNYQYAIDNVMDPMHGAYLH 183
>gi|254489200|ref|ZP_05102404.1| vanillate O-demethylase oxygenase subunit [Roseobacter sp. GAI101]
gi|214042208|gb|EEB82847.1| vanillate O-demethylase oxygenase subunit [Roseobacter sp. GAI101]
Length = 355
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 19/211 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + D DD + LT+ Q IV+++ +G+L +DRCPHRL LS+G+ I ++
Sbjct: 8 WYVAGWSTDFGDDL-VPLTLLAQNIVVFRCSDGQLAALEDRCPHRLLPLSKGKRIGDTIQ 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F+ G+CV++ P + +P SA V ++ V E G+V++WM + +K
Sbjct: 67 CGYHGMTFDAGGQCVRV---PGQSNLPTSAYVDSFPVLERHGIVFIWMG-----DAEKAD 118
Query: 203 WFENFARPGF-QDVSTIH-----ELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
F P +D +H + ++ + ENL+DPAH+ H T A E+
Sbjct: 119 TALAFDMPELSEDGWHLHHGDKLHIKANYLNVAENLVDPAHVSFVHPTTLGNAASEN--- 175
Query: 257 LGFEVTERTDRGFAGRWGKEKDEPLPNFLRF 287
+ V + A RW ++ EP+ F +F
Sbjct: 176 VPVHVKTADEAIVAWRWIRDA-EPIGFFKQF 205
>gi|170690844|ref|ZP_02882010.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
gi|170144093|gb|EDT12255.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
Length = 359
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 6/162 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V DAP+G+T QIVL++D G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-GDAPIGITRLGDQIVLWRDKEGKVHALEDRCPHRGARLSLGWNLGGSVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT--PPNPDK 200
C YHG + G G K+P + ++ + CV++Y +E G +++W P P K
Sbjct: 85 CWYHGIEINGGGTVTKVPAV-SNCPLEGQKCVKSYPAEEHAGAIFLWFGDDAHKEPAPLK 143
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
LP E + + ++ ++N+MDP H H
Sbjct: 144 LP--EELVGDEYASFLCMSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|121608344|ref|YP_996151.1| vanillate monooxygenase [Verminephrobacter eiseniae EF01-2]
gi|121552984|gb|ABM57133.1| Vanillate monooxygenase [Verminephrobacter eiseniae EF01-2]
Length = 352
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 72/145 (49%), Gaps = 3/145 (2%)
Query: 98 LGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCV 157
L TV DQ IVLY+ NG D C HRL LS G ++D + C YHG +F+ EG+C
Sbjct: 26 LARTVCDQDIVLYRKQNGAAVALADACWHRLLPLSLGTIVDDDVRCGYHGLRFDSEGRCT 85
Query: 158 KIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVST 217
+P+ I SACVR + + E VW+W +P +P P +
Sbjct: 86 ---HMPSQETINPSACVRAFPIVERHRFVWIWPGDPALADPTLVPDLRWMNDPAWTGDGR 142
Query: 218 IHELPYDHSILLENLMDPAHIPISH 242
+ E+ D+ ++++NLMD H H
Sbjct: 143 MTEVKADYRLVIDNLMDLTHETYVH 167
>gi|404446361|ref|ZP_11011475.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium vaccae
ATCC 25954]
gi|403650535|gb|EJZ05766.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium vaccae
ATCC 25954]
Length = 355
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 86/182 (47%), Gaps = 19/182 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+ + ++D+ P T+ DQ +V+++D G R RC HR L++G+++ +
Sbjct: 19 WFVVARSQDI--STPQSATLLDQNLVVFRDSTGAARVTDRRCIHRGGNLADGKVVGDAIA 76
Query: 143 CLYHGWQFE-GEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT--PPNPD 199
C YHGWQF+ G G+C +IP LPAD +IP A ++ Y V E G VW + PNP
Sbjct: 77 CPYHGWQFDGGSGQCTRIPSLPADGRIPPKAEIKAYPVIERFGHVWTCLGDPVFDLPNPP 136
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD---------RTDWTAK 250
++ E R IH EN D AH P H+ TD K
Sbjct: 137 EIADLELEWRAA----EPIHAA-CGFMAATENFRDMAHFPFVHEPSMGDVDPVVTDLDVK 191
Query: 251 RE 252
RE
Sbjct: 192 RE 193
>gi|171317565|ref|ZP_02906753.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MEX-5]
gi|171097259|gb|EDT42106.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MEX-5]
Length = 356
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 10/187 (5%)
Query: 56 HKVLVGPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNG 115
H+V P A RG + +Y WYP+ + V +AP+GLT +QIVL++D G
Sbjct: 7 HEVQHDPVRAYLDRG---IKNY-----WYPVAPSWQV-SNAPVGLTRLSEQIVLWRDHEG 57
Query: 116 ELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVR 175
++ +DRCPHR A+LS G + G + C YHG + +G G ++P + ++ + CV+
Sbjct: 58 KVHALEDRCPHRGARLSLGWNLGGSIACWYHGVEIDGGGTVNRVPAV-SNCPLEGMKCVK 116
Query: 176 TYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDP 235
+Y V+E G +++W + P L E + + ++ ++N+MDP
Sbjct: 117 SYPVEEKAGAIFLWFGDEAHGEPAPLNLPEELVDAEYGHFLCVSNWKCNYQYAIDNVMDP 176
Query: 236 AHIPISH 242
H H
Sbjct: 177 MHGAYLH 183
>gi|195984464|gb|ACG63810.1| SxtT [Aphanizomenon sp. NH-5]
Length = 339
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 147/338 (43%), Gaps = 35/338 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYK--DGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
WY + +D + ++ ++VL++ + N ++ +QD CPHR LS G++ +
Sbjct: 12 WYVVAKVEDCKPGSITTASLLGVKLVLWRSDEPNSPIQVWQDYCPHRGVALSMGEIANNT 71
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP-D 199
L C YHGW++ GKCV+IP P D P SA +TY +E G+VWV + NP +
Sbjct: 72 LVCAYHGWRYNEAGKCVQIPAHP-DMIPPASAIAKTYHCQERYGLVWVCLG-----NPVN 125
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
+P F + P + T L + +++N +D +H P HD W R +
Sbjct: 126 DIPEFPEWDDPNYHKTYTKSYLIQASAFRVMDNSLDVSHFPFIHD--GWLGDRNYTKVEN 183
Query: 259 FEVTERTDRGFAGRWGKE--------KDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYF 310
FEV D G++ + +D+ N+ R P + S++ E
Sbjct: 184 FEVKLDKDGLTMGKYQFQTSRIVSHIEDDSWVNWFRLSHPLC-----QYCVSESPEMR-I 237
Query: 311 TGLFLCRPTGQGKSML--IVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQN-- 366
L P + S+L ++ + ++ L K + E+D+ L +Q
Sbjct: 238 VDLMTITPIDEDNSVLRMLITWNGSQMLDFKTLESK--MLTEYDETIEEDIRILHAQQPA 295
Query: 367 --EVLMKETVPTKELYLNLR-SSDTWVAEYRKWMDKVG 401
+L + + T+ L + SD YR+W+ ++G
Sbjct: 296 RLPLLTPKQINTQWLPQEIHVPSDKCTVAYRRWLKELG 333
>gi|384221115|ref|YP_005612281.1| vanillate O-demethylase oxygenase subunit [Bradyrhizobium japonicum
USDA 6]
gi|354960014|dbj|BAL12693.1| vanillate O-demethylase oxygenase subunit [Bradyrhizobium japonicum
USDA 6]
Length = 349
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 140/328 (42%), Gaps = 37/328 (11%)
Query: 96 APLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 155
A L T+ + +V+Y+ +G + +D C HRL LS+G+L + C YHG ++ +G+
Sbjct: 22 ALLPRTICGKHVVMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGR 81
Query: 156 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP---WFENFARPGF 212
C +P+ I SACVR Y V E VW+WM +P +P W + A G
Sbjct: 82 CTF---MPSQETINPSACVRAYPVVERHRYVWLWMGDPALADPALVPDMHWNHDPAWAG- 137
Query: 213 QDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTE--------R 264
D TIH + D+ ++L+NLMD H H + +A F+VT R
Sbjct: 138 -DGKTIH-VNCDYRLVLDNLMDLTHETFVHGSSIGNDAVAEAP---FDVTHGEKTVTVTR 192
Query: 265 TDRGFAGR--WGKEKDEPLP----NFLRFEAPCVLQNNRELVDSKTG-----EKHYFTGL 313
RG W K+ +P +RFEAPC + + + + TG G
Sbjct: 193 WMRGIEAPPFWAKQLGKPGLVDRWQIIRFEAPCTIAIDVGVAPTGTGAPEGDRSQGVNGF 252
Query: 314 FLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKET 373
L T + + + + + + + S +F +D L +Q + +
Sbjct: 253 VLNTITPETEKTCHYFWAFVRNYQIGEQRITTEIREGVSGIFHEDELILEAQQRAM--DE 310
Query: 374 VPTKELY-LNLRSSDTWVAEYRKWMDKV 400
P + Y LN+ + W RK +D++
Sbjct: 311 NPDRIFYNLNIDAGAMWT---RKLIDRM 335
>gi|302830776|ref|XP_002946954.1| hypothetical protein VOLCADRAFT_120385 [Volvox carteri f.
nagariensis]
gi|300267998|gb|EFJ52180.1| hypothetical protein VOLCADRAFT_120385 [Volvox carteri f.
nagariensis]
Length = 505
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 82/158 (51%), Gaps = 22/158 (13%)
Query: 102 VFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL--IDGRLECLYHGWQFEGEGKCVKI 159
V +Q+V+++ +D CPHRLA LSEG+L RL C YHGW+F+ EG C K+
Sbjct: 2 VLGEQLVVWRHSLRGWVVQRDVCPHRLAPLSEGRLEAAGTRLACAYHGWEFDEEGSCTKV 61
Query: 160 PQLPADAKI-------PRSACVRTYEVKESQGVVWVWMSQ--------KTPPNPDKLPWF 204
PQL +D + PRS CV +Y E G++ VWM K P P L
Sbjct: 62 PQLSSDPRAAATACSSPRS-CVTSYPTLELDGLLLVWMDDSKEGRQQAKIAPKPKLL--- 117
Query: 205 ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E+ A+P D +E+P D++ LE MDP+H H
Sbjct: 118 EDGAKP-ILDSWFANEMPVDYTYWLEQGMDPSHANFLH 154
>gi|108799225|ref|YP_639422.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium sp. MCS]
gi|119868341|ref|YP_938293.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium sp. KMS]
gi|126434883|ref|YP_001070574.1| Rieske (2Fe-2S) domain-containing protein [Mycobacterium sp. JLS]
gi|108769644|gb|ABG08366.1| Rieske (2Fe-2S) region [Mycobacterium sp. MCS]
gi|119694430|gb|ABL91503.1| Rieske (2Fe-2S) domain protein [Mycobacterium sp. KMS]
gi|126234683|gb|ABN98083.1| Rieske (2Fe-2S) domain protein [Mycobacterium sp. JLS]
Length = 352
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 20/169 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+ + ++D+ P T+ DQ +V+++D G R RC HR A L++G+++ ++
Sbjct: 19 WFVVARSQDI--STPQSATLLDQNLVVFRDSTGAARVTDRRCIHRGANLADGKVVGDSIQ 76
Query: 143 CLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-- 199
C YHGWQF+G G C +IP LPA+ +IP A ++ Y V E G VW + PD
Sbjct: 77 CPYHGWQFDGSTGACSRIPSLPANGRIPPKAAIKAYPVIERFGHVWTCLGDPVFDLPDPP 136
Query: 200 -----KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
+L W A P D + EN D AH P H+
Sbjct: 137 EIADLELEW--RAAEPIHADCGFM--------AATENFRDMAHFPFVHE 175
>gi|427737913|ref|YP_007057457.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
gi|427372954|gb|AFY56910.1| ring-hydroxylating dioxygenase, large terminal subunit [Rivularia
sp. PCC 7116]
Length = 325
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 137/334 (41%), Gaps = 38/334 (11%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+W+ + ++++ + L + + Q ++L+++G E ++DRCPHR A LS+G + L
Sbjct: 9 DWHVVASSENLVEGKILKVRLLGQDVLLWRNGK-EALAWEDRCPHRGASLSKGWIEKDNL 67
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRS-ACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YHG F GEGKC IP P RS ACV+TY ++E G+VWV + P D
Sbjct: 68 VCSYHGLAFNGEGKCSHIPAHPEQIPSKRSKACVKTYHLQERYGMVWVCLG---IPQQD- 123
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSI--LLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
+P+ + P F + + + S LEN +D H+P H+ T D G
Sbjct: 124 VPFLAEWDNPEFYNKIFFDGVLHRSSAPRTLENFIDMNHVPFIHNG---TLGNSDYPEQG 180
Query: 259 FEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEK-----HYFTGL 313
E G + Q N ++ + G+ H L
Sbjct: 181 TYTVELKGDG----------------IHIHEVNTWQVNMDIDSERQGDNDPVNFHVLRPL 224
Query: 314 FLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWY-FHQNASKVFEQDMGFLSSQNEVLMKE 372
C G + + F T L +W F+ ++ F + ++ E
Sbjct: 225 TACLRRGTESQRMAIFFTVTPTEEEECLVWRWMVFNYEVPHQEFKNFTFAVIEQDIQAIE 284
Query: 373 TVPTKELYLNLRS-----SDTWVAEYRKWMDKVG 401
+ K L LNL SD YRKW+ ++G
Sbjct: 285 SQKPKRLPLNLADEYHLPSDRSTITYRKWLKQLG 318
>gi|375101692|ref|ZP_09747955.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora cyanea NA-134]
gi|374662424|gb|EHR62302.1| ring-hydroxylating dioxygenase, large terminal subunit
[Saccharomonospora cyanea NA-134]
Length = 377
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 131/334 (39%), Gaps = 35/334 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +V PL TV + L+++ G D C HRLA LS+G+++ L+
Sbjct: 29 WYVAAWDHEVTTKKPLARTVAGVPLALWRNTEGRAVALADACWHRLAPLSKGKILGDELQ 88
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG ++ G+C +PA I SA V Y V E VWVW+ + +P +P
Sbjct: 89 CPYHGLRYNSTGRCTG---MPAQETINPSAMVPAYPVVERYRYVWVWVGEPDLADPAAVP 145
Query: 203 WFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
P + D TIH ++ ++L+NLMD H H + +E+ F+V
Sbjct: 146 DMHQMDDPAWAGDGETIH-ADCNYQLVLDNLMDLTHEEFVHAS---SIGQEELSEAEFDV 201
Query: 262 TERTDRGFAGRWGKEKDEP----------LPNF---------LRFEAPCVLQNNRELVDS 302
+ RW ++ D P P F +RFEAP + + + +
Sbjct: 202 VHEGNTVTVTRWMRDIDAPPFWLKNMRDKFPGFEGKVDRWQIIRFEAPSTICIDVGVAKA 261
Query: 303 KTG-----EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQ 357
TG G + T + + + L Q+ VF +
Sbjct: 262 GTGAPEGDRSQGVNGYVMNTITPETHRSCHYFWAFMRNYRLDSQTITTQLRQSVHGVFAE 321
Query: 358 DMGFLSSQNEVLMKETVPTKELY-LNLRSSDTWV 390
D L +Q + + P E Y LN+ + WV
Sbjct: 322 DEDMLRAQQSAI--DANPEHEFYSLNIDTGGMWV 353
>gi|221068866|ref|ZP_03544971.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
gi|220713889|gb|EED69257.1| Rieske (2Fe-2S) domain protein [Comamonas testosteroni KF-1]
Length = 441
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 81/161 (50%), Gaps = 4/161 (2%)
Query: 83 WYPLYLTKDVPDDAPL-GLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
W P+ L +++ D P+ + V Q VL++D NGEL CPHR A LS G+L DG L
Sbjct: 27 WQPVALKEELEGDRPIRAVKVLGQDFVLFRDENGELGMLDRDCPHRGADLSFGRLEDGGL 86
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C +HGW F+ +G C++ P PA +K+ + Y V + G+++ ++ + PP
Sbjct: 87 RCPFHGWLFDAKGDCLETPAEPAGSKLCTKIKQKAYPVVQRAGIIFAYLGEGEPP---AF 143
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
P F+ F P + + LE +DPAH H
Sbjct: 144 PEFDCFVAPDSHVFAFKGLFECNWLQALEVGIDPAHASYLH 184
>gi|399076244|ref|ZP_10751897.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398037577|gb|EJL30762.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 340
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 81/177 (45%), Gaps = 10/177 (5%)
Query: 101 TVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 160
T D +VLY++ ++ DRCPHR A LS GQ+++GRL C YHG F+ G CV
Sbjct: 25 TFLDIPVVLYRNAEAKVIALHDRCPHRFAPLSMGQIVEGRLRCGYHGLSFDEAGACVHSL 84
Query: 161 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHE 220
P++A VR + V E +VW+WM P + +P + +
Sbjct: 85 M---STVAPKAAKVRAFAVHEQDKMVWIWMGDAAPGDTAAIPRLPHHTDEVMSCNFGLTT 141
Query: 221 LPYDHSILLENLMDPAHIPISH---DRTDWTAK----REDAQPLGFEVTERTDRGFA 270
D+ +L +NLMD H + H D+ AK ED Q + V E FA
Sbjct: 142 AKADYRLLSDNLMDLTHTALLHPAFGGLDYIAKTKSWEEDGQVVSDHVVEDMPAFFA 198
>gi|224075992|ref|XP_002304862.1| predicted protein [Populus trichocarpa]
gi|222842294|gb|EEE79841.1| predicted protein [Populus trichocarpa]
Length = 256
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 83/177 (46%), Gaps = 21/177 (11%)
Query: 67 ERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGN-GELRCYQDRCP 125
E + Q +DW +WYP+ L D+ P V IVL+ D N + + D CP
Sbjct: 70 ELEVDSQGEKFDWYAQWYPIMLVCDLDKRVPHAKRVMGLDIVLWWDRNENTWKVFGDACP 129
Query: 126 HRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADA---KIPRSACVRTYEVKE 181
HRLA LSEG++ GRL+C+YHGW F G G C IPQ D + ACV Y
Sbjct: 130 HRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQASPDGPPVHTFKKACVAVYPSTV 189
Query: 182 SQGVVWVW----------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSIL 228
+VW W +++K PP +L P F ++ ++PY ++ L
Sbjct: 190 HHDIVWFWPNSDPQYKDIITKKQPPTIPEL------DDPSFIKLTGCRDIPYGYANL 240
>gi|311106169|ref|YP_003979022.1| rieske [2Fe-2S] domain-containing protein 5 [Achromobacter
xylosoxidans A8]
gi|310760858|gb|ADP16307.1| rieske [2Fe-2S] domain protein 5 [Achromobacter xylosoxidans A8]
Length = 356
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 128/316 (40%), Gaps = 44/316 (13%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++V + T+ +++Y+D G L +DRC HR A LS G+ +
Sbjct: 7 WYVAAWDQEVGANGLFSRTIIGVPVLMYRDAAGRLVALEDRCCHRGAPLSVGRREGDCVR 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C+YHG +F+ G CV + PA A+IP A VRT+ V E +W+WM +P +P
Sbjct: 67 CMYHGLKFDPTGACV---EAPAQARIPPQARVRTFPVVERHRWIWIWMGDPERADPALIP 123
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
+ P ++ + ++ ++ +NL+D +H+P H T ED + +V
Sbjct: 124 DTQWLDHPDWRSLDGYIHYDVNYLLIADNLLDFSHLPFVHPTT--LGGSEDYAAVSPKVD 181
Query: 263 ERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRE---LVDSKTGEKHYFTGLFLCR-- 317
D RW L EAP + RE LVD G+ L
Sbjct: 182 RLPDGVRITRWT----------LNTEAPPFARKVREWPGLVDRWNIYNFTLPGILLMDSG 231
Query: 318 --PTGQG-----KSMLIVRFGATKRSPLAKLFPKWYF-----------------HQNASK 353
P G G ++ I G +P ++F HQ+ +
Sbjct: 232 MAPAGNGAQEGNRAGAIEFRGCQALTPETATSTHYFFAHPHNFSIDQPEVTASIHQSVVE 291
Query: 354 VFEQDMGFLSSQNEVL 369
F++D +++Q L
Sbjct: 292 AFDEDRDIITAQQRSL 307
>gi|254254240|ref|ZP_04947557.1| Phenylpropionate dioxygenase [Burkholderia dolosa AUO158]
gi|124898885|gb|EAY70728.1| Phenylpropionate dioxygenase [Burkholderia dolosa AUO158]
Length = 356
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V +AP+G+T +QIVL++D G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-SNAPVGITRLSEQIVLWRDHAGKVHALEDRCPHRGARLSLGWNLGGNIA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G K+P + ++ + + CV++Y V E G +++W P L
Sbjct: 85 CWYHGIEVDGGGTVNKVPAV-SNCPLEGTKCVKSYPVDEKAGAIFLWFGDDAHAEPAPLN 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVADEYAHFLCVSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|427711932|ref|YP_007060556.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
6312]
gi|427376061|gb|AFY60013.1| Rieske (2Fe-2S) domain-containing protein [Synechococcus sp. PCC
6312]
Length = 351
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 14/204 (6%)
Query: 70 GERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLA 129
GER + Y WY + + LG T+ + I+ + G++ +D CPHR
Sbjct: 3 GERDL--YFLRNLWYYALPGQQLQPGQLLGKTLLEDPILFGRTEAGQVFAIRDLCPHRGV 60
Query: 130 KLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKI-PRSACVRTYEVKESQGVVWV 188
L G+L+ +EC YHGW+F G+C IP L A+ + CV++Y V+E QG +W+
Sbjct: 61 PLRYGRLVGTEVECPYHGWRFNPRGECTLIPGLVAEQQFNTEKICVQSYPVREVQGNIWI 120
Query: 189 WMSQK---TPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
+M K PP ++P FA + P + L+DP H+P H
Sbjct: 121 FMPAKPGDQPPPDLEIPMVPEFAPDCVAQAWQQFQFPCHVDYAISGLVDPQHVPFVHRAW 180
Query: 246 DW--------TAKREDAQPLGFEV 261
W AK D PLGF +
Sbjct: 181 WWRTNAPLFEKAKAFDPAPLGFTM 204
>gi|293394550|ref|ZP_06638846.1| Rieske family iron-sulfur cluster-binding protein [Serratia
odorifera DSM 4582]
gi|291423015|gb|EFE96248.1| Rieske family iron-sulfur cluster-binding protein [Serratia
odorifera DSM 4582]
Length = 357
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 6/188 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V ++ PLG+T +QQIVL++DG G + +DRCPHR A+LS G + R+
Sbjct: 34 WYPVLASWEVGNN-PLGITRLEQQIVLWRDGEGAIHALEDRCPHRGARLSMGWNLGDRIA 92
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G+G +P + + C+R+Y KE+ G ++++ P +L
Sbjct: 93 CWYHGVEVGGDGTVKDVPAVDR-CPLVGQKCLRSYPAKEAYGAIFLFFGVTADQPPSELA 151
Query: 203 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
+ + A + + ++ LEN+MDP H H + A + + E
Sbjct: 152 FPQELADDESYSNFLCTASWDCNYQYALENVMDPMHGTYLHSSSHSMADGDRKADMALEP 211
Query: 262 TERTDRGF 269
TD GF
Sbjct: 212 ---TDSGF 216
>gi|42571757|ref|NP_973969.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
gi|332193914|gb|AEE32035.1| chlorophyllide a oxygenase [Arabidopsis thaliana]
Length = 511
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 154/326 (47%), Gaps = 39/326 (11%)
Query: 28 VIISLNKTPKSRKCHAVT-DRSSTSTVGDHKVLVGPASAEERRGERQVADYDWTEEWYPL 86
V+ L+K S AV DR T+T + GP + ++ WYP+
Sbjct: 174 VVTELDKPSSSTTASAVELDREKTNTGAKSLNVSGPVPPYSP----HLKNF-----WYPV 224
Query: 87 YLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYH 146
T D+ D + + F+Q V+++ +G+ C ++ C HR L G + +GR++C YH
Sbjct: 225 AFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLDLGTVNEGRIQCPYH 284
Query: 147 GWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFE 205
GW++ +G+C K+P KI C+ E +G++W+W + PP P LP +
Sbjct: 285 GWEYSTDGECKKMPSTKLLKVKIKSLPCL------EQEGMIWIWPGDE-PPAP-ILPSLQ 336
Query: 206 NFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTER 264
+ GF + +LP +H +LL+NL+D AH P +H T AK L +T
Sbjct: 337 PPS--GFLIHAELVMDLPVEHGLLLDNLLDLAHAPFTHTST--FAKGWSVPSLVKFLTPT 392
Query: 265 TDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL-----VDSKTGEK--HYFTGLFLCR 317
+ G G W +P P + F+ PC++ + + ++ K+ ++ + L +C
Sbjct: 393 S--GLQGYW-----DPYPIDMEFKPPCIVLSTIGISKPGKLEGKSTQQCATHLHQLHVCL 445
Query: 318 PTGQGKSMLIVRFGATKRSPLAKLFP 343
P+ + K+ L+ R + +P+ K P
Sbjct: 446 PSSKNKTRLLYRM-SLDFAPILKNLP 470
>gi|407773414|ref|ZP_11120715.1| vanillate monooxygenase [Thalassospira profundimaris WP0211]
gi|407283878|gb|EKF09406.1| vanillate monooxygenase [Thalassospira profundimaris WP0211]
Length = 338
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query: 97 PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 156
P+ T+ ++ +VLY+ + L +D CPHRL LS+G + RL C YHG +F+G+G C
Sbjct: 20 PVARTICNENVVLYRRADRSLVALEDSCPHRLLPLSQGYVEGDRLVCGYHGLEFDGDGAC 79
Query: 157 VKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVS 216
V +P I ACVR Y V E VWVW+ K + +P + + G+
Sbjct: 80 V---HMPNQQSIHPEACVRAYPVVEKDRFVWVWIGDKEKADEALVPDIPHASEEGWVFDG 136
Query: 217 TIHELPYDHSILLENLMDPAHIPISH 242
+++ + +L++NLMD +H H
Sbjct: 137 GTYDVKCGYELLVDNLMDLSHETYVH 162
>gi|414164011|ref|ZP_11420258.1| hypothetical protein HMPREF9697_02159 [Afipia felis ATCC 53690]
gi|410881791|gb|EKS29631.1| hypothetical protein HMPREF9697_02159 [Afipia felis ATCC 53690]
Length = 382
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 7/218 (3%)
Query: 72 RQVADYDWTEE-WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAK 130
R +A Y E WY + D P + G V + IV ++ +G++ Y DRC H+
Sbjct: 7 RALATYACVENCWYMIGTAADFPAEKLTGHVVAKKPIVAWRTKHGQVVAYDDRCAHKRFP 66
Query: 131 LSEGQLI-DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW 189
LS+G+L+ DG LEC YHG +++ GKCV IP P P+ A VR Y + E G++W+W
Sbjct: 67 LSKGRLMQDGTLECAYHGLRYDMTGKCVMIPSHPTGPISPQ-AIVRPYPIVEQDGLIWLW 125
Query: 190 MSQKTPPNPDKLPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWT 248
K P ++ ++ E+P ++ +L+ENL+D H HD
Sbjct: 126 PGNPALSGTRKPPRLPEVGSEDWKTEIIGPMEIPANYLLLIENLLDITHFYPLHDGN--I 183
Query: 249 AKREDAQ-PLGFEVTERTDRGFAGRWGKEKDEPLPNFL 285
E+++ P+ E E +A K D P +L
Sbjct: 184 GDIENSRIPVDLEEGEEDGNRYAMTIRKVTDYKQPPYL 221
>gi|395775049|ref|ZP_10455564.1| oxidoreductase subunit alpha [Streptomyces acidiscabies 84-104]
Length = 354
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 142/337 (42%), Gaps = 48/337 (14%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
+WY + + +V + LG TV + IV+Y+ + +G DRC HR LS L R
Sbjct: 11 QWYVMAYSHEVGREL-LGRTVLGEPIVVYRTEADGTPVALHDRCVHRRYPLSASGLDGDR 69
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG+ ++ G CV +P ++PR+A V Y V E ++WVW+ +P
Sbjct: 70 IVCGYHGFTYDTTGTCVYVP---GQKRVPRTARVAAYPVVEQDSLIWVWIGDPALADPAA 126
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
+P + PG+ V + + D+ +L++NL+D +H H T + + P+ E
Sbjct: 127 IPRARHLDAPGWTTVRGMEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAET-PITTE 185
Query: 261 VTE-----RTDR---------------GFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELV 300
V E R R G GR + +D + + APC+ + +
Sbjct: 186 VDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQD------IEYHAPCLYLLHSRIA 239
Query: 301 ------DSKTGEKHYFTG--LFLCRPTGQGKSM---LIVRFGATKRSPLAKLFPKWYFHQ 349
++ + H F + P+G GK ++ R AT + + +
Sbjct: 240 PVGVAPEADGSDPHGFHTEITYAITPSGDGKVYDFWMVSRDWATDDEEVTE-----FLRG 294
Query: 350 NASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSS 386
N V QD+ L+ L E +EL +N+ +
Sbjct: 295 NNHTVVMQDVDALNLLQRTLGSERDGYQELSINIDTG 331
>gi|254248108|ref|ZP_04941428.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
gi|124874609|gb|EAY64599.1| Phenylpropionate dioxygenase [Burkholderia cenocepacia PC184]
Length = 356
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V + AP+GLT +QIVL++D +G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQVSN-APVGLTRLSEQIVLWRDHDGKVHALEDRCPHRGARLSLGWNLGGNIA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G ++P + ++ + CV++Y V+E G +++W + P L
Sbjct: 85 CWYHGIEVDGGGTVNRVPAV-SNCPLEGMKCVKSYPVEEKAGAIFLWFGDEAHGEPAPLN 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVADEYAHFLCVSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|73537405|ref|YP_297772.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia eutropha
JMP134]
gi|72120742|gb|AAZ62928.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
Length = 355
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V AP+G+T Q IVL++D G++ +DRCPHR A+LS G + R+
Sbjct: 21 WYPVAASWAVTH-APIGITRLSQNIVLWRDNAGQVHALEDRCPHRGARLSMGWNLGDRVA 79
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP----NP 198
C YHG + G+G+ +P + + + CVR+Y V+E G +++W + P +P
Sbjct: 80 CWYHGVEVGGDGQVKSVPAVDS-CPLEGRTCVRSYPVQEQAGAIFLWFGDQAPQEGEGSP 138
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
D L E + ++ ++N+MDP H H
Sbjct: 139 DALRLPEELVSEEHSHFLCVAHWDCNYRYAIDNVMDPMHGAYLH 182
>gi|172063589|ref|YP_001811240.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia ambifaria
MC40-6]
gi|171996106|gb|ACB67024.1| Rieske (2Fe-2S) domain protein [Burkholderia ambifaria MC40-6]
Length = 356
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V +AP+GLT +QIVL++D G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-SNAPVGLTRLSEQIVLWRDHEGKVHALEDRCPHRGARLSLGWNLGGNIA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G ++P + ++ + CV++Y V+E G +++W + P L
Sbjct: 85 CWYHGVEIDGGGTVNRVPAV-SNCPLEGMKCVKSYPVEEKAGAIFLWFGDEAHGEPAPLN 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVDAEYGHFLCVSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|410647609|ref|ZP_11358032.1| vanillate monooxygenase [Glaciecola agarilytica NO2]
gi|410132827|dbj|GAC06431.1| vanillate monooxygenase [Glaciecola agarilytica NO2]
Length = 349
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T D + PLG + ++IV Y+ G++ +D CPHR A LS G + DG L
Sbjct: 7 WY-VACTPDEFTNKPLGRQICGERIVFYRGTEGKVSAVEDFCPHRGAPLSLGYVEDGLLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G ++P ++ C+R+Y V E G VWVW + T +P K+P
Sbjct: 66 CGYHGLKMGCDGSTAEMP----GQRVNGFPCIRSYPVVERHGFVWVWTGESTLADPSKIP 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E P + ++ + D+ ++++NLMD H H
Sbjct: 122 ELEWANNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVH 161
>gi|152981997|ref|YP_001354194.1| hypothetical protein mma_2504 [Janthinobacterium sp. Marseille]
gi|151282074|gb|ABR90484.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 354
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 84/163 (51%), Gaps = 6/163 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ ++ D PL +T+ DQ +VL + NG + RCPH+ L+ GQ++DG +E
Sbjct: 30 WHPVAYASEL-GDTPLAVTLLDQSLVLAR-LNGVVTALDSRCPHKGTSLALGQIVDGTIE 87
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+++ GKCV++P + + A V Y E G++WV + + PD P
Sbjct: 88 CPYHGWRYDDGGKCVRVPAREELCDVLK-ASVAKYHAAEHVGIIWVALEEPLYAFPD-FP 145
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
FE+ Q S ++ LEN +D AH HD T
Sbjct: 146 EFEDAEYNVLQGTS--YDWATSSPRRLENFVDFAHFSFVHDGT 186
>gi|92112477|ref|YP_572405.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
gi|91795567|gb|ABE57706.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
Length = 353
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T D ++ PLG T+ ++QIV ++ G++ +D CPHR A LS G + DG+L
Sbjct: 7 WY-VACTPDEIEEKPLGRTICNEQIVFFRAEGGQVAAVEDFCPHRGAPLSLGFVRDGQLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +GKC +P ++ + Y V E G +WVW +PD++P
Sbjct: 66 CGYHGLEMGCDGKCSSMP----GQRVRGFPSIHAYPVVERHGFIWVWPGDAEQADPDQIP 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
P + ++ + D+ ++++NLMD H H + + E+A P
Sbjct: 122 ELHWANDPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQPEIEEAAP 175
>gi|421521214|ref|ZP_15967873.1| Rieske 2Fe-2S family protein [Pseudomonas putida LS46]
gi|402755154|gb|EJX15629.1| Rieske 2Fe-2S family protein [Pseudomonas putida LS46]
Length = 341
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL-IDGRL 141
WY L L +D P T+ + +VL+K +G QDRC HR AKLS+G + +G +
Sbjct: 13 WYAL-LPMTALEDGPKPFTLLGEALVLWKRPDGTPVAMQDRCCHRTAKLSKGFVSAEGTI 71
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW+++ G CVKIPQ P A IP A V+ Y +E G WV + P +
Sbjct: 72 ACGYHGWEYDCTGTCVKIPQNPTGA-IPPGAAVKAYHCQEKYGYAWVSLDAPLQP----I 126
Query: 202 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
P F PG++ + +E + ++EN D +H H + QP +E
Sbjct: 127 PEFPEDGAPGYRRIFQFYEEWKTSPLRVMENSFDNSHFSFVHKAN--FGLFDQPQPASYE 184
Query: 261 VTERTDRGF 269
E TD GF
Sbjct: 185 FRE-TDYGF 192
>gi|270262999|ref|ZP_06191269.1| hypothetical protein SOD_d00140 [Serratia odorifera 4Rx13]
gi|421785376|ref|ZP_16221802.1| rieske family iron-sulfur cluster-binding protein [Serratia
plymuthica A30]
gi|270042687|gb|EFA15781.1| hypothetical protein SOD_d00140 [Serratia odorifera 4Rx13]
gi|407752393|gb|EKF62550.1| rieske family iron-sulfur cluster-binding protein [Serratia
plymuthica A30]
Length = 347
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V ++ P+G+T +QQIV+++DG G + +DRCPHR A+LS G + R+
Sbjct: 24 WYPVLASWEVGNN-PVGITRLEQQIVVWRDGEGAIHALEDRCPHRGARLSMGWNLGDRIA 82
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G+G +P + + C+R+Y KE+ G V+++ P +L
Sbjct: 83 CWYHGVEVGGDGTVKDVPAVDR-CPLVGQKCLRSYPAKEAYGAVFLYFGITADEAPPELT 141
Query: 203 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
+ + A + + ++ LEN+MDP H H + A+ + + E
Sbjct: 142 FPQELADEAAYSNFLCTASWDCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMALEP 201
Query: 262 TERTDRGF 269
TD GF
Sbjct: 202 ---TDTGF 206
>gi|170690208|ref|ZP_02881375.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
gi|170144643|gb|EDT12804.1| Rieske (2Fe-2S) domain protein [Burkholderia graminis C4D1M]
Length = 344
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 7/151 (4%)
Query: 94 DDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL-IDGRLECLYHGWQFEG 152
DD P T+ + IVL+K G+ +DRC HR AKLS+G + DG + C YHGW ++
Sbjct: 23 DDGPKPFTLLGENIVLWKGAGGKPHALRDRCCHRTAKLSKGFVDSDGNIACGYHGWTYDC 82
Query: 153 EGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGF 212
G+CVKIPQ A +IP A V++Y +E G WV + + P +P F PG+
Sbjct: 83 TGQCVKIPQNGA-GEIPSRAVVQSYRCEERYGYAWVALDEPLQP----IPEFPEETAPGY 137
Query: 213 QDVSTIHELPYDHSI-LLENLMDPAHIPISH 242
+ + +E + ++EN D AH H
Sbjct: 138 RRILQFYEQWNTSPLRMMENSFDNAHFSFVH 168
>gi|218291425|ref|ZP_03495351.1| Rieske (2Fe-2S) domain protein [Alicyclobacillus acidocaldarius
LAA1]
gi|218238715|gb|EED05933.1| Rieske (2Fe-2S) domain protein [Alicyclobacillus acidocaldarius
LAA1]
Length = 327
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 9/182 (4%)
Query: 67 ERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPH 126
ERR D + WY + + + P V + +VL++D +G +R C H
Sbjct: 3 ERRAPVPSEDRVFPATWYAVCFSAQLTRRRPHAARVAGRDLVLFRDASGHVRALSRYCTH 62
Query: 127 RLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVV 186
R A L+ G++ G L C YHGWQF+G+G+C IP P D IP A R Y E G+
Sbjct: 63 RGADLALGRVEGGHLACAYHGWQFQGDGRCTLIPAHP-DRPIPDFAHNRAYPACERGGIA 121
Query: 187 WVWMSQKT-PPNPDKLPWFEN--FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD 243
WV++ +T PP P + + ++DV H + ++E+++D AH+ H
Sbjct: 122 WVYLGGETSPPEPRVFSELTDGSYRLVPYEDVWQAHL-----TRVVESVLDVAHLAFVHR 176
Query: 244 RT 245
+T
Sbjct: 177 KT 178
>gi|145296350|ref|YP_001139171.1| hypothetical protein cgR_2265 [Corynebacterium glutamicum R]
gi|417971133|ref|ZP_12612061.1| hypothetical protein CgS9114_08886 [Corynebacterium glutamicum
S9114]
gi|140846270|dbj|BAF55269.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044612|gb|EGV40288.1| hypothetical protein CgS9114_08886 [Corynebacterium glutamicum
S9114]
Length = 376
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI--DGR 140
WY +V P+ T+ ++ + LY+ +G D C HRLA LS+G+L+ DG
Sbjct: 22 WYVAAWDYEVTSKKPMARTIANKPLALYRTKDGRAVALADACWHRLAPLSKGKLVGTDG- 80
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
++C YHG ++ G+C+K +PA + SA V +Y V E+ VWVW+ T +P +
Sbjct: 81 IQCPYHGLEYNSAGRCMK---MPAQETLNPSAAVNSYPVVEAHRFVWVWLGDPTLADPTQ 137
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
+P + P + ++ ++L+NLMD H H + +++ F
Sbjct: 138 VPDMHQMSHPEWAGDGRTISADCNYQLVLDNLMDLTHEEFVHSS---SIGQDELSESEFV 194
Query: 261 VTERTDRGFAGRWGKEKDEP 280
VT D RW + D P
Sbjct: 195 VTHTEDSVTVTRWMHDIDAP 214
>gi|19553582|ref|NP_601584.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Corynebacterium glutamicum ATCC 13032]
gi|62391226|ref|YP_226628.1| vanillate O-demethylase oxygenase subunit [Corynebacterium
glutamicum ATCC 13032]
gi|21325154|dbj|BAB99776.1| Ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenases [Corynebacterium glutamicum ATCC 13032]
gi|41326566|emb|CAF21048.1| PROBABLE VANILLATE O-DEMETHYLASE OXYGENASE SUBUNIT [Corynebacterium
glutamicum ATCC 13032]
gi|385144481|emb|CCH25520.1| ferredoxin subunits of nitrite reductase and ring-hydroxylating
dioxygenase [Corynebacterium glutamicum K051]
Length = 376
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI--DGR 140
WY +V P+ T+ ++ + LY+ +G D C HRLA LS+G+L+ DG
Sbjct: 22 WYVAAWDYEVTSKKPMARTIANKPLALYRTKDGRAVALADACWHRLAPLSKGKLVGTDG- 80
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
++C YHG ++ G+C+K +PA + SA V +Y V E+ VWVW+ T +P +
Sbjct: 81 IQCPYHGLEYNSAGRCMK---MPAQETLNPSAAVNSYPVVEAHRFVWVWLGDPTLADPTQ 137
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
+P + P + ++ ++L+NLMD H H + +++ F
Sbjct: 138 VPDMHQMSHPEWAGDGRTISADCNYQLVLDNLMDLTHEEFVHSS---SIGQDELSESEFV 194
Query: 261 VTERTDRGFAGRWGKEKDEP 280
VT D RW + D P
Sbjct: 195 VTHTEDSVTVTRWMHDIDAP 214
>gi|406039915|ref|ZP_11047270.1| vanillate O-demethylase oxygenase [Acinetobacter ursingii DSM 16037
= CIP 107286]
Length = 358
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 86/175 (49%), Gaps = 5/175 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +D+ D PLG T+ ++IV Y+ ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEDI-QDKPLGRTICGEKIVFYRGKENKVAAVEDFCPHRGAPLSLGYVEDGNLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG EGK + +P ++ C ++Y V E G +WVW +KT N LP
Sbjct: 66 CGYHGLVMGCEGKTISMPA----QRVTGFPCNKSYAVVEKMGFIWVWPGEKTLANEADLP 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPL 257
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 VLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPV 176
>gi|428210223|ref|YP_007094576.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
gi|428012144|gb|AFY90707.1| Rieske (2Fe-2S) iron-sulfur domain protein [Chroococcidiopsis
thermalis PCC 7203]
Length = 364
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + + +T++ Q I +++D +G+L D C H+ L +GQ+ L
Sbjct: 26 WYPVGWANKLQPGHIMPVTIWKQAIAVFRDTDGQLHALDDACAHKGVALHKGQIQGKHLL 85
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F G G+CVKIP LP K+P A VR+Y V+E ++W++ + LP
Sbjct: 86 CPYHGWEFNGAGQCVKIPYLPETHKLP-CAQVRSYPVREKYNLIWIFPGDASLATSIPLP 144
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDW 247
F P V +I EN MD H + + W
Sbjct: 145 EIPEFDDPDCLMVPIPAHFQAHFTICNENTMDVFHGFLHKNLQGW 189
>gi|333929001|ref|YP_004502580.1| Rieske (2Fe-2S) domain-containing protein [Serratia sp. AS12]
gi|333933954|ref|YP_004507532.1| Rieske (2Fe-2S) domain-containing protein [Serratia plymuthica AS9]
gi|386330824|ref|YP_006026994.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Serratia sp.
AS13]
gi|333475561|gb|AEF47271.1| Rieske (2Fe-2S) iron-sulfur domain protein [Serratia plymuthica
AS9]
gi|333493061|gb|AEF52223.1| Rieske (2Fe-2S) iron-sulfur domain protein [Serratia sp. AS12]
gi|333963157|gb|AEG29930.1| Rieske (2Fe-2S) iron-sulfur domain protein [Serratia sp. AS13]
Length = 347
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V ++ P+G+T +QQIV+++DG G + +DRCPHR A+LS G + R+
Sbjct: 24 WYPVLASWEVGNN-PVGITRLEQQIVVWRDGEGAIHALEDRCPHRGARLSMGWNLGDRIA 82
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G+G +P + + C+R+Y KE+ G V+++ P +L
Sbjct: 83 CWYHGVEVGGDGTVKDVPAVDR-CPLVGQKCLRSYPAKEAYGAVFLYFGITADEAPPELT 141
Query: 203 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
+ + A + + ++ LEN+MDP H H + A+ + + E
Sbjct: 142 FPQELADEAAYSNFLCTASWDCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMALEP 201
Query: 262 TERTDRGF 269
TD GF
Sbjct: 202 ---TDTGF 206
>gi|170737946|ref|YP_001779206.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169820134|gb|ACA94716.1| Rieske (2Fe-2S) domain protein [Burkholderia cenocepacia MC0-3]
Length = 356
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V +AP+GLT +QIVL++D +G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-SNAPVGLTRLSEQIVLWRDHDGKVHALEDRCPHRGARLSLGWNLGGNIA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G ++P + ++ + CV++Y V+E G +++W + P L
Sbjct: 85 CWYHGIEVDGGGTVNRVPAV-SNCPLEGLKCVKSYPVEERAGAIFLWFGDEAHGEPAPLN 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 144 LPEELVADEYAHFLCVSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|83955042|ref|ZP_00963698.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. NAS-14.1]
gi|83840371|gb|EAP79544.1| putative vanillate O-demethylase oxygenase, iron-sulfur subunit
[Sulfitobacter sp. NAS-14.1]
Length = 355
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 33/216 (15%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + D D+ + LT+ Q +V Y+ +G++ +DRCPHRL LS+G+ I ++
Sbjct: 8 WYVAGWSTDFGDEL-VPLTLLAQNLVAYRTSDGQIAVLEDRCPHRLLPLSKGKRIGDTIQ 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F +G CV++ P + +P+SA V +Y V E +V++WM +P
Sbjct: 67 CGYHGMTFGADGACVRV---PGQSNLPKSAYVDSYPVLERHDIVFIWMGDADKADPALAF 123
Query: 203 WFENFARPGFQDVSTIH-----ELPYDHSILLENLMDPAHIPISHDRTDWTAKRE----- 252
+ G+ +H + ++ + ENL+DPAH+ H T A E
Sbjct: 124 DLPELGQEGWH----VHHGDKLHIRANYLNVAENLVDPAHVSFVHPTTLGNAASENVPVH 179
Query: 253 ---------------DAQPLGFEVTERTDRGFAGRW 273
DA+P+GF G RW
Sbjct: 180 VKTADEVIVAWRWIRDAEPIGFFKAFGGFSGNVDRW 215
>gi|388547602|ref|ZP_10150865.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. M47T1]
gi|388274362|gb|EIK93961.1| Rieske (2Fe-2S) domain-containing protein [Pseudomonas sp. M47T1]
Length = 348
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 5/174 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T D PLG + + +V Y++G+G++ +D CPHR A LS G+++DG+L
Sbjct: 7 WY-VACTPDELAPGPLGRQICGESMVFYRNGSGQVAALEDFCPHRGAPLSLGRVVDGQLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +GK +P ++ RT+ E G +WVW ++ P ++P
Sbjct: 66 CGYHGLVMGCDGKVQSMP----GQRVASFPLTRTFACVERHGFIWVWPGEQALAEPGQIP 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
E P + ++E+ D+ ++++NLMD H H + + ++A P
Sbjct: 122 HLEWANNPQWAYGGGLYEIACDYRLMIDNLMDLTHETYVHASSIGQKEIDEALP 175
>gi|87199507|ref|YP_496764.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135188|gb|ABD25930.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 351
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 76/160 (47%), Gaps = 3/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + P T + +V Y+ G+G L DRC HRLA LS G+L +
Sbjct: 13 WYVAGWDYEFTAGKPHPRTFLAEPVVFYRKGDGTLVAMADRCVHRLAPLSLGRLEGDDIR 72
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C+YHG +F +GKCV+I P IP SAC++TY V E W+WM + LP
Sbjct: 73 CMYHGMRFTADGKCVEI---PGQDMIPSSACIQTYPVVEKGSWAWIWMGDPHLADAALLP 129
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
P + S + H ++ +NL+D +H+ H
Sbjct: 130 DARGLDDPVWVLKSGQLDYAAPHELINDNLLDLSHLAYVH 169
>gi|428778765|ref|YP_007170551.1| ring-hydroxylating dioxygenase, large terminal subunit
[Dactylococcopsis salina PCC 8305]
gi|428693044|gb|AFZ49194.1| ring-hydroxylating dioxygenase, large terminal subunit
[Dactylococcopsis salina PCC 8305]
Length = 349
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 93/184 (50%), Gaps = 11/184 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D P + + +VL+ D +G + +DRC HR A+LS G++ +G L
Sbjct: 32 WYPV-IPLDQIQSEPKHFQLLGENLVLWTDQSGHSKAAKDRCCHRSAQLSLGKVENGNLV 90
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP-DKL 201
C YHGW FEG G CV++PQL KIP++ + TY + G WV + + NP +
Sbjct: 91 CPYHGWTFEGSGSCVRVPQLEDQEKIPKTYRIETYWCQSRYGYAWVCLGE----NPLADI 146
Query: 202 PWFENFARPGFQDVSTIHELPYDHSIL--LENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
P + P F+ + +E P+ + L +EN +D AH H T E P
Sbjct: 147 PEIPEASDPEFRCIPEFYE-PWHCAGLRVMENELDLAHPTFVHTGT--FGSEEHPVPDEM 203
Query: 260 EVTE 263
++TE
Sbjct: 204 DITE 207
>gi|357394269|ref|YP_004909110.1| putative vanillate O-demethylase oxygenase subunit [Kitasatospora
setae KM-6054]
gi|311900746|dbj|BAJ33154.1| putative vanillate O-demethylase oxygenase subunit [Kitasatospora
setae KM-6054]
Length = 342
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 140/330 (42%), Gaps = 24/330 (7%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG-NGELRCYQDRCPHRLAKLSEGQLIDGR 140
+WY +V DD LG TV + +VLY+ +G DRC HR LSE +
Sbjct: 8 QWYVAAYAAEVGDDL-LGRTVLGEPVVLYRSAEDGRAIALADRCVHRRFPLSESRREGDA 66
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG+ ++ G CV +P ++PR+A V Y V E +VW+W+ + +
Sbjct: 67 IICGYHGFTYDRTGACVSVP---GQTRVPRTARVAAYPVVEQDSLVWIWIGDPAAADASR 123
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
+P + A P V + + D+ +L++NL+D +H H T + A P+ E
Sbjct: 124 VPRAPHLADPAMTTVRGMEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVA-ATPITTE 182
Query: 261 VTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFT-GLFLCR-- 317
V E R + + P P + R E S+ + YF L+L
Sbjct: 183 VDEEAGVVRVSRHMADAECP-PFYAR-------STGIEGRISRLQDIEYFAPCLYLLHSR 234
Query: 318 --PTGQGKSMLI--VRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKET 373
P GQ + + + T +P +++ W ++ + EQ FL N ++ +
Sbjct: 235 ITPVGQPGPVFRTEITYAITPSAP-GRVYDFWAVSRDFAVGDEQVTAFLRDFNHTVVMQD 293
Query: 374 VPTKELYLNLRSSDTWVAEYRKWMDKVGHG 403
V L L R+ DT Y++ + G
Sbjct: 294 V--DALDLLQRALDTEPGPYQELSINIDTG 321
>gi|238059738|ref|ZP_04604447.1| oxygenase alpha subunit [Micromonospora sp. ATCC 39149]
gi|237881549|gb|EEP70377.1| oxygenase alpha subunit [Micromonospora sp. ATCC 39149]
Length = 347
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 88/187 (47%), Gaps = 6/187 (3%)
Query: 98 LGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCV 157
L TV + +VLY+ G G DRC HR LSE +L + C YHG+ ++ G CV
Sbjct: 22 LARTVLGEPLVLYRTGAGAAVALADRCVHRRYPLSESRLDGDTIVCGYHGFTYDPTGACV 81
Query: 158 KIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVST 217
+P +IPR+A V +Y V E +WVW+ + +P +P A PG+ V
Sbjct: 82 FVP---GQQRIPRTARVTSYPVVEQDSFIWVWIGDRDRADPATIPRAPWLADPGYAVVRG 138
Query: 218 IHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEK 277
+ L + +L++NLMD +H H T + + P+ EV E DRG
Sbjct: 139 MAPLNARYGLLVDNLMDLSHETYLHGGYIGTPEVANT-PITTEVDE--DRGIVYVSRHMD 195
Query: 278 DEPLPNF 284
D P F
Sbjct: 196 DAECPPF 202
>gi|220908309|ref|YP_002483620.1| Rieske (2Fe-2S) domain-containing protein [Cyanothece sp. PCC 7425]
gi|219864920|gb|ACL45259.1| Rieske (2Fe-2S) domain protein [Cyanothece sp. PCC 7425]
Length = 337
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 9/188 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYPL ++ + P T+ + +VL+ D G DRC HR AKLS G++++G +
Sbjct: 13 WYPLIPLVEL-EQGPQAFTLLGEPLVLWLDAQGNPAATLDRCCHRQAKLSTGKVMEGCIR 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F+ +G CV++PQ P D IP + + + + G WV + + D +P
Sbjct: 72 CPYHGWEFDAQGACVRVPQHP-DRPIPSNYRITAFACRAHYGYAWVCLEEPL----DTIP 126
Query: 203 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
F P F+ + +E + L+EN D H H++ + + P+ +
Sbjct: 127 AFPEADDPHFRLIPAFYETWNCSGLRLMENAFDHGHHHFVHNQN--LGDKHNPIPIPYNQ 184
Query: 262 TERTDRGF 269
T+RG
Sbjct: 185 LRETERGI 192
>gi|398385455|ref|ZP_10543476.1| ring-hydroxylating dioxygenase, large terminal subunit [Sphingobium
sp. AP49]
gi|397720406|gb|EJK80963.1| ring-hydroxylating dioxygenase, large terminal subunit [Sphingobium
sp. AP49]
Length = 355
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 101 TVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 160
T+ Q +VL++ GE+ +DRC HR LSEG +I + C YHG +F +G CV I
Sbjct: 36 TILGQPLVLFRTEGGEVSALEDRCCHRAMPLSEGVVIGESIRCPYHGLEFGTDGACVHI- 94
Query: 161 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHE 220
PA KIPR+A VR + + E ++W+WM + +P P + S ++
Sbjct: 95 --PAQDKIPRTARVRHFPLVEKDALLWIWMGDADKADIAIIPDHPYHQDPAWAWRSAHYD 152
Query: 221 LPYDHSILLENLMDPAHIPISHDRT 245
+ + +L++NLMD +H+P H T
Sbjct: 153 VQGNWQLLVDNLMDLSHLPYIHPST 177
>gi|448243829|ref|YP_007407882.1| Rieske (2Fe-2S) domain-containing protein [Serratia marcescens WW4]
gi|445214193|gb|AGE19863.1| Rieske (2Fe-2S) domain-containing protein [Serratia marcescens WW4]
Length = 347
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 6/188 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V ++ P+G+T QQIV+++DG G++ +DRCPHR A+LS G + R+
Sbjct: 24 WYPVLASWEVGNN-PVGITRLGQQIVVWRDGEGQIHALEDRCPHRGARLSMGWNLGDRIA 82
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G+G +P + + C+R+Y KE+ G V+++ P +L
Sbjct: 83 CWYHGVEVGGDGTVKDVPAVDR-CPLVGQKCLRSYPAKEAYGAVFLYFGVTADETPAELT 141
Query: 203 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
+ + A + ++ LEN+MDP H H + A+ + + E
Sbjct: 142 FPQELADEASYSHFLCTASWNCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMALEP 201
Query: 262 TERTDRGF 269
TD GF
Sbjct: 202 ---TDSGF 206
>gi|49176900|ref|YP_025403.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
eutropha JMP134]
gi|72384285|ref|YP_293638.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
gi|39777480|gb|AAR31055.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
eutropha JMP134]
gi|72123638|gb|AAZ65781.1| Rieske (2Fe-2S) region [Ralstonia eutropha JMP134]
Length = 358
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 74/150 (49%), Gaps = 5/150 (3%)
Query: 98 LGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCV 157
L T+ +Q +V ++ +G + DRC HR LS G+LI ++C YHG F G+G C
Sbjct: 21 LARTLLEQPVVFFRRNDGSVAALADRCSHRRVSLSLGRLIGDEVQCGYHGLTFAGDGSCT 80
Query: 158 KIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVST 217
I P +++P SACVR+Y V E G VW+W N +P + G
Sbjct: 81 SI---PGQSRVPPSACVRSYPVVERDGFVWIWPGDPALANETLVPDYAEICSSGRYVGRP 137
Query: 218 IHELPYDHSIL--LENLMDPAHIPISHDRT 245
L + L +EN++D +H+ +H T
Sbjct: 138 AEALLVEAPFLFNIENVLDLSHVTYAHPET 167
>gi|443311426|ref|ZP_21041054.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
gi|442778464|gb|ELR88729.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechocystis sp. PCC 7509]
Length = 354
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + ++ + + ++ + I +Y+D NG++ +D CPH+ +L G++ L
Sbjct: 27 WYAVGWADELKIGEIMPVVIWSRAIAIYRDQNGQIHALEDACPHKGVQLHRGKVTGCNLA 86
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F G+G CV IP LP K+PR A R Y V+E ++W++ N LP
Sbjct: 87 CGYHGWEFNGDGDCVNIPYLPKTQKLPR-AQARNYPVEEKYNLIWIFPGDPALANTSDLP 145
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 237
+ + V SI EN MD H
Sbjct: 146 NIPELTQKEWLVVPLSARFQAHFSICNENTMDVFH 180
>gi|239814693|ref|YP_002943603.1| Rieske (2Fe-2S) domain-containing protein [Variovorax paradoxus
S110]
gi|239801270|gb|ACS18337.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 449
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 88/172 (51%), Gaps = 10/172 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ + D A L + + +VLYKD G RCPHR A +S G + L
Sbjct: 27 WHPVAGASEFDDKAVKPLRILGEDLVLYKDLGGNYGLVDRRCPHRNADMSYGFVEQCGLR 86
Query: 143 CLYHGWQFEGEGKCVKIP---QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 199
C YHGWQ++ G+CV P L DA++ R+ ++ Y V+E G++W +M + P
Sbjct: 87 CSYHGWQYDQSGQCVHQPFEETLDPDARMRRNTKIKAYPVQEKAGLLWAYMGPQPAP--- 143
Query: 200 KLPWFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAK 250
LP +E F R GF + E+P + EN +DP H +H+ +WT +
Sbjct: 144 LLPDWELFNFRNGFAQ-AVFAEIPCNWFQCQENSIDPVHFEWTHN--NWTTR 192
>gi|418243964|ref|ZP_12870392.1| vanillate O-demethylase oxygenase subunit [Corynebacterium
glutamicum ATCC 14067]
gi|354511995|gb|EHE84896.1| vanillate O-demethylase oxygenase subunit [Corynebacterium
glutamicum ATCC 14067]
Length = 376
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI--DGR 140
WY +V P+ T+ ++ + LY+ +G D C HRLA LS+G+L+ DG
Sbjct: 22 WYVAAWDYEVTSKKPMARTIANKPLALYRTKDGRAVALADACWHRLAPLSKGKLVGTDG- 80
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
++C YHG ++ G+C+K +PA + SA V +Y V E+ VWVW+ T +P +
Sbjct: 81 IQCPYHGLEYNSAGRCMK---MPAQETLNPSAAVNSYPVVEAHRFVWVWLGDPTLADPTQ 137
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
+P + P + ++ ++L+NLMD H H + +++ F
Sbjct: 138 VPDMHQMSHPEWAGDGRTISADCNYQLVLDNLMDLTHEEFVHSS---SIGQDELSESEFV 194
Query: 261 VTERTDRGFAGRWGKEKDEP 280
VT D RW + D P
Sbjct: 195 VTHTEDSVTVTRWMHDIDAP 214
>gi|434388981|ref|YP_007099592.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
gi|428019971|gb|AFY96065.1| ring-hydroxylating dioxygenase, large terminal subunit
[Chamaesiphon minutus PCC 6605]
Length = 321
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 1/178 (0%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + +P L + D+++VLY+ +G +R + C HR A L+ G + + +
Sbjct: 6 WYAVEFCNAI-GTSPKLLKILDRELVLYRTADGRIRAIDNNCIHRGAALANGWIENDCIV 64
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQ++ +G C KIP A A IP+ A + Y V E G +W+++ + +P
Sbjct: 65 CPYHGWQYQTDGTCSKIPSQAATATIPKPAKMAVYPVGEKYGWIWLFLGDEMAGEIPTIP 124
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
F + + ++ +LEN +D AH P H R + Q L E
Sbjct: 125 NFPQLESDAIRSIQGEFYWNANYERVLENGLDFAHAPFVHSGAFGNPDRPEIQDLQIE 182
>gi|427731793|ref|YP_007078030.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
gi|427367712|gb|AFY50433.1| ring-hydroxylating dioxygenase, large terminal subunit [Nostoc sp.
PCC 7524]
Length = 340
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 137/311 (44%), Gaps = 28/311 (9%)
Query: 73 QVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLS 132
Q AD+ WY + L++ + + L ++ + + +++ +G+ +DRC HR ++LS
Sbjct: 2 QFADF-----WYIVTLSEQLKSNTVLARSLLGEWLAIFRGEDGQPVALRDRCLHRSSRLS 56
Query: 133 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ 192
G + G L+C YHGW ++ GK + +P D + + + Y KE G V+V +++
Sbjct: 57 AGNVCQGALQCPYHGWVYDRNGKVIAVPAEGVDFQPSQQRQAKAYATKEQDGYVYVRLAE 116
Query: 193 KTPPNPDKLPW-FENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH--------- 242
P+ D P+ ++ G++ V I+ + + EN +D H H
Sbjct: 117 N--PSVDFAPFSMPHYGEAGWETVRVINRFANNVTNCAENFIDIPHTAFVHPGVFRTSRQ 174
Query: 243 DRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDS 302
+ + T +RE+ L E ++ G+ R+ + + + RF P + V+
Sbjct: 175 QKLEMTVERENGAVLVEYRNENSNLGWYTRFLNREGAEIKHSDRFYMPNITS-----VEY 229
Query: 303 KTGEKHYFTGLFLCRPTGQGKSMLI--VRFGATKRSPLAKLFPKWYFHQNASKVFEQDMG 360
+ G + P + +++ V + + LA+ F W A + QD+
Sbjct: 230 QMGRDRHLFITSQSIPETENSTLVYTDVTYNYGIWNKLARPFVWW----TAQHIIRQDVE 285
Query: 361 FLSSQNEVLMK 371
L+ Q EV+ K
Sbjct: 286 ILAIQGEVIAK 296
>gi|456386742|gb|EMF52278.1| oxidoreductase subunit alpha [Streptomyces bottropensis ATCC 25435]
Length = 351
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 141/342 (41%), Gaps = 42/342 (12%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
+WY ++V + LG TV + +V Y+ + G DRC HR LSE L R
Sbjct: 8 QWYVAAYAEEVGREL-LGRTVLGEPLVFYRTEEEGTPVALHDRCVHRRYPLSESGLDGDR 66
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG+ ++ G CV +P +IPR+A V +Y V E ++WVW+ +P
Sbjct: 67 IVCGYHGFTYDTTGACVYVP---GQKRIPRTARVASYPVVEQDSLIWVWIGDPALADPQT 123
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
+P + A PG+ V + + D+ +L++NL+D +H H T + + P+ E
Sbjct: 124 IPRARHLAAPGWTTVRGMEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAET-PITTE 182
Query: 261 VTE-----RTDR---------------GFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELV 300
V E R R G GR + +D + + APC+ L+
Sbjct: 183 VDEGAGVVRVSRHMDDAECPPFYARSTGIEGRITRWQD------IEYFAPCLY-----LL 231
Query: 301 DSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMG 360
S+ P G + A S K++ W ++ + E+ G
Sbjct: 232 HSRIAPVGVLPEADGSDPNGFHTEITY----AITPSSDGKVYDFWMVSRDWATESEEVTG 287
Query: 361 FLSSQNE-VLMKETVPTKELYLNLRSSDTWVAEYRKWMDKVG 401
FL N V+M++ V L L + T E +D G
Sbjct: 288 FLRGNNHTVVMQDVVALNLLQETLGTERTGYQELSINIDTGG 329
>gi|37521491|ref|NP_924868.1| oxygenase, Rieske iron-sulfur component [Gloeobacter violaceus PCC
7421]
gi|35212488|dbj|BAC89863.1| gll1922 [Gloeobacter violaceus PCC 7421]
Length = 346
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 14/172 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + ++ + P +T++ + I L++ +G +DRCPHR KLS G++++G LE
Sbjct: 18 WYAVAQSAELKTE-PRSITLWGEAIALFRGADGVAHAVEDRCPHRQVKLSHGRVVEGSLE 76
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F+G+G+C +P + +P +RTY V+E G VW++ +P +
Sbjct: 77 CAYHGWRFDGDGRCTHVPY--REGSLP-GCRLRTYPVREHDGFVWLFAG-----DPGRAH 128
Query: 203 WFENFARPGFQDVSTIHEL-----PYDHSILLENLMDPAHIPISHDRTDWTA 249
E P + ++ I + +S L+ENLMD H + W A
Sbjct: 129 AVEPLRLPEWDHLNYIASVAPIACAAHYSYLIENLMDMHHGHLHERFQAWGA 180
>gi|27377501|ref|NP_769030.1| vanillate O-demethylase oxygenase [Bradyrhizobium japonicum USDA
110]
gi|27350645|dbj|BAC47655.1| vanillate O-demethylase oxygenase subunit [Bradyrhizobium japonicum
USDA 110]
Length = 354
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 132/326 (40%), Gaps = 33/326 (10%)
Query: 96 APLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 155
A L T+ + +V+Y+ +G + +D C HRL LS+G+L + C YHG ++ +G+
Sbjct: 27 ALLPRTICGKHVVMYRKADGAVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGR 86
Query: 156 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDV 215
C +P+ I SACVR Y V E +W+WM +P +P P +
Sbjct: 87 CTF---MPSQETINPSACVRAYPVVERHRYIWLWMGDPALADPALVPDMHWNHDPAWAGD 143
Query: 216 STIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGK 275
+ D+ ++L+NLMD H H + +A F+VT RW +
Sbjct: 144 GKTIRVNCDYRLVLDNLMDLTHETFVHGSSIGNDAVAEAP---FDVTHGEKTVTVTRWMR 200
Query: 276 EKDEPLP---------------NFLRFEAPCVLQNNRELVDSKTG-----EKHYFTGLFL 315
EP P +RFEAPC + + + + TG G L
Sbjct: 201 NI-EPPPFWAKQLGKPGLVDRWQIIRFEAPCTIAIDVGVAPTGTGAPEGDRSQGVNGFVL 259
Query: 316 CRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVP 375
T + + + + + + + S +F +D L +Q + + P
Sbjct: 260 NTITPETEKTCHYFWAFVRNYQIGEQRITTEIREGVSGIFHEDELILEAQQRAM--DENP 317
Query: 376 TKELY-LNLRSSDTWVAEYRKWMDKV 400
+ Y LN+ + W RK +DK+
Sbjct: 318 DRVFYNLNIDAGAMWT---RKLIDKM 340
>gi|390575016|ref|ZP_10255123.1| vanillate monooxygenase [Burkholderia terrae BS001]
gi|389932818|gb|EIM94839.1| vanillate monooxygenase [Burkholderia terrae BS001]
Length = 349
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++DV D + + ++LY+ +G DRCPHR A LS G+ + +E
Sbjct: 8 WYAAAWSRDVGADLST-RELLGEPMLLYRKHDGAPVAMIDRCPHRFAPLSMGKRVGDGIE 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG QF+ G C K P D +IP A VR++ ++ G+VW+W + + + +P
Sbjct: 67 CGYHGLQFDCSGACSKNPH--GDGRIPPGARVRSFPAEDRHGLVWIWAGEPSRADASLIP 124
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
F + P + V + ++++NLMD +H+ H
Sbjct: 125 DFSHLVSPRLKTVGDEMTQKAHYELVVDNLMDLSHVNYLH 164
>gi|330992786|ref|ZP_08316730.1| Chlorophyllide a oxygenase [Gluconacetobacter sp. SXCC-1]
gi|329760264|gb|EGG76764.1| Chlorophyllide a oxygenase [Gluconacetobacter sp. SXCC-1]
Length = 333
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 93/191 (48%), Gaps = 14/191 (7%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L+ ++ DAP + Q IV+++D +G DRCPHR A+LS G + +GR+
Sbjct: 15 WYCLFPMHEL-SDAPRAFRLLGQDIVVWRDEDGRPHAVIDRCPHRSARLSGGTVEEGRIV 73
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-KL 201
C YHGW F G+G+CV +PQ +A P+ V+ E G VWV P P L
Sbjct: 74 CPYHGWAFRGDGRCVSVPQSVTNAG-PQFG-VKALHCTERYGQVWV-----CPGEPAFDL 126
Query: 202 PWFENFARPGFQDVSTIHE-LPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
P +F +PG++ + E ++EN D AH H + D P +
Sbjct: 127 PHVPHFEKPGYRQIFEFSEDWACSAQRIIENEFDTAHFSFVH---KGSFGDSDPAPARTD 183
Query: 261 VTERTDRGFAG 271
+TE T+ GF
Sbjct: 184 ITE-TETGFVA 193
>gi|194740219|gb|ACF94647.1| dioxygenase [Aphanizomenon flos-aquae NH-5]
gi|195984468|gb|ACG63814.1| SxtH [Aphanizomenon sp. NH-5]
Length = 339
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 149/344 (43%), Gaps = 31/344 (9%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK--DGNGELRCYQDRCPHRLAKLS 132
AD +WY + +D + ++ ++VL++ + N ++ +QD CPHR LS
Sbjct: 4 ADLILINDWYVVANGEDCKPGSITTASLLGVKLVLWRSHEQNSPIQVWQDHCPHRGVALS 63
Query: 133 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ 192
G++ + L C YHGW++ GKCV+IP P D P +A +TY +E G+VWV +
Sbjct: 64 MGEIANNTLVCAYHGWRYNEAGKCVQIPAHP-DMIPPANAQAKTYHCQERYGLVWVCLG- 121
Query: 193 KTPPNP-DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAK 250
NP + +P F + P + T L + +++N +D +H P HD
Sbjct: 122 ----NPVNDIPSFPEWDDPNYHKTCTKSHLIQSSAFRVMDNFIDVSHFPFVHDGG--LGD 175
Query: 251 REDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNF---LRFEAPCVLQN-NRELVDSKTGE 306
AQ FEV D G + +P F ++++ + Q + L E
Sbjct: 176 HNHAQVEDFEVKVDKDGITMGNLQLQ----MPRFNSSIKYDLWTLWQRISHPLCQYYIAE 231
Query: 307 KHYF--TGLFLCRPTGQGKSM--LIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFL 362
L L P + S+ +++ + + S L K + EQD+ +
Sbjct: 232 SSGIRTADLMLVTPIDEDNSLVRMLITWNCPEISDFKTLESK--LLAEFDETVEQDIRII 289
Query: 363 SSQN----EVLMKETVPTKELYLNLRS-SDTWVAEYRKWMDKVG 401
SQ +L+ + + T+ L + SD YR+W+ ++G
Sbjct: 290 YSQQPARLPLLLPKQINTQWLSQEIHVPSDRCTVAYRRWLKELG 333
>gi|367475962|ref|ZP_09475388.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 285]
gi|365271749|emb|CCD87856.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 285]
Length = 347
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 138/339 (40%), Gaps = 34/339 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +V A L T+ + +V+Y+ +G + +D C HRL LS+G+L +
Sbjct: 10 WYAAAWDAEV-KQALLPRTICGKHVVMYRKADGTIAALEDACWHRLVPLSKGRLEGDTVV 68
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F +G+C +P+ I SACVR Y E +W+WM + +P +P
Sbjct: 69 CGYHGLKFSPQGRCAF---MPSQETINPSACVRAYPAVERHRFIWLWMGEPALADPATIP 125
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
P + ++ D+ ++++NLMD H H + +A F+VT
Sbjct: 126 DMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAP---FDVT 182
Query: 263 ERTDRGFAGRWGKEKDEPLP---------------NFLRFEAPCVLQNNRELVDSKTG-- 305
RW + EP P +RFEAPC + + + + TG
Sbjct: 183 HGERTATVTRWMR-GIEPPPFWAKQLGKPGLVDRWQIIRFEAPCTVTIDVGVAPTGTGAP 241
Query: 306 ---EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFL 362
G+ L T + + + L++ + S +F +D L
Sbjct: 242 EGDRSQGVNGMVLNTITPETDKTCHYFWAFARNYQLSEQRLTTEIREGVSGIFREDEFIL 301
Query: 363 SSQNEVLMKETVPTKELY-LNLRSSDTWVAEYRKWMDKV 400
+Q + + P + Y LN+ + W R+ +D++
Sbjct: 302 EAQQRAM--DENPGRVFYNLNIDAGAMWA---RRIIDRM 335
>gi|453330723|dbj|GAC87469.1| vanillate O-demethylase oxygenase [Gluconobacter thailandicus NBRC
3255]
Length = 351
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 10/172 (5%)
Query: 78 DW---TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
DW + WYP+ L++D+ D+P+G+T+ D +V+Y+ +G++ D CPHR LS G
Sbjct: 25 DWQILAKSWYPVALSRDL-GDSPMGVTLLDAPLVVYR-ADGDIVIADDLCPHRGVPLSMG 82
Query: 135 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
+ C YHG++F +G+CV++P P D+KIP +RTY V E G++W + +
Sbjct: 83 NGNGKTIACAYHGFRFGQDGRCVRVPAHP-DSKIPPKLHLRTYPVIERFGLIWTCLRPEG 141
Query: 195 PPNPDKLPWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISHDRT 245
N +P +++ P FQ ++ ++ +E +D AH H T
Sbjct: 142 DVNLPPMPHWDD---PAFQQITCPWIDIKGFAGRQVEGFIDVAHFAFVHTET 190
>gi|347529881|ref|YP_004836629.1| phthalate 4,5-dioxygenase [Sphingobium sp. SYK-6]
gi|345138563|dbj|BAK68172.1| phthalate 4,5-dioxygenase [Sphingobium sp. SYK-6]
Length = 439
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 83 WYPLYLTKDVP-DDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
W P+ L ++P PL + + + +VL++D +G L CPHR A LS G++ DG L
Sbjct: 27 WQPVALASEIPLGGDPLPIDILSEALVLFRDEDGRLGLLGRHCPHRGADLSYGRVEDGGL 86
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
CLYHGW F+ GKC++ P P + C ++Y V E G V+ +M PP
Sbjct: 87 RCLYHGWLFDVGGKCLEQPAEPKGSTFKDKICQKSYPVVERGGAVFAYMGPGEPP---LF 143
Query: 202 PWFENFARP 210
P ++ FA P
Sbjct: 144 PAYDFFAYP 152
>gi|149925020|ref|ZP_01913339.1| Rieske (2Fe-2S) protein [Plesiocystis pacifica SIR-1]
gi|149814105|gb|EDM73730.1| Rieske (2Fe-2S) protein [Plesiocystis pacifica SIR-1]
Length = 361
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
WY +KD+ PL + V + +VL++ GE+ DRC HRLA LS G+
Sbjct: 6 NNWYVASWSKDLAVGEPLAMQVLGRPLVLWRGPKGEVSALDDRCVHRLAPLSRGRCEGAN 65
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
L C YHG F G+ V+I P +IP A R Y V E +W+WM +PD+
Sbjct: 66 LRCRYHGMVFAPGGEVVEI---PGQDEIPARARARAYPVLERHSWIWIWMGDPARADPDR 122
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+P + + + D ++ +NL+D +HI H
Sbjct: 123 IPAMVGLDDENYYLGAGTLDFAADAQLVRDNLLDFSHISYLH 164
>gi|428226501|ref|YP_007110598.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Geitlerinema
sp. PCC 7407]
gi|427986402|gb|AFY67546.1| Rieske (2Fe-2S) iron-sulfur domain protein [Geitlerinema sp. PCC
7407]
Length = 365
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + + + +TV+ Q I +Y+D G + +D CPH+ L +G ++ L
Sbjct: 26 WYAVSWSDRLKPGQVIAVTVWQQAIAVYRDTEGNVHALEDACPHKGVALHKGLVLGQNLA 85
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F+ +G+C KIP LP K+P A R+Y + + ++W++ +P
Sbjct: 86 CRYHGWEFDSQGECAKIPYLPPSQKLP-CAKARSYPICDRYNLLWIFPGDPALAETTPVP 144
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDW 247
F +PG+ V SI EN MD H + + W
Sbjct: 145 HIAEFDQPGYLMVPVTGHFKAHFSICNENSMDVFHGFLHENLQGW 189
>gi|399021513|ref|ZP_10723611.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
gi|398091419|gb|EJL81863.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
Length = 345
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WY +++ D PL T+ ++ +VL++ +G++ +DRC HR LS G L DG +
Sbjct: 6 QWYVAGFVREL-QDKPLARTLLNRPVVLFRTESGQVAALEDRCCHRSVPLSCGSLEDGGI 64
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ---KTPPNP 198
C YHG + G+C++I P KIP ACV+ Y V ++W+W+ + P
Sbjct: 65 RCGYHGLLYAPSGQCIEI---PGQVKIPGKACVKAYTVAVRNDIIWLWLGEGIDSADSRP 121
Query: 199 D-KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT-DWTAKREDAQP 256
D + P P ++ + + ++ +NL+D +H+ H RT AK P
Sbjct: 122 DGQPPEIAAHDNPRYKYKGGVFHYDAPYQLIHDNLLDLSHVGYVHARTIGGNAKTHMEAP 181
Query: 257 LGFEVTERTDRGFAGRWGKEKDEP 280
VT D+ RW K P
Sbjct: 182 T--NVTSDGDKVRVVRWMKASQPP 203
>gi|254414093|ref|ZP_05027861.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
gi|196179229|gb|EDX74225.1| Rieske (2Fe-2S) domain protein [Coleofasciculus chthonoplastes PCC
7420]
Length = 371
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 87/169 (51%), Gaps = 13/169 (7%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + P + + +Q+ VLY++ +G++ D+CPHR A LS G + + L
Sbjct: 6 WYACEFSSAI-TQKPKQILMLNQRFVLYRNTHGQVVALNDQCPHRGAALSLGWVDNNCLR 64
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F+ +GKC+ IP + IP+ A V +Y V+E G VW++ P LP
Sbjct: 65 CPYHGWKFQADGKCIDIPANAPEMPIPKKARVDSYPVQEKYGFVWLFYGDLPPEKRPPLP 124
Query: 203 WFENFARPGFQDVSTIHELPYD------HSILLENLMDPAHIPISHDRT 245
+F + +H + Y+ ++ ++E MD AH+ H ++
Sbjct: 125 TLPDFI------FANLHPVEYECTENAHYARIMEINMDFAHVIAVHKQS 167
>gi|420249650|ref|ZP_14752889.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
gi|398063536|gb|EJL55262.1| ring-hydroxylating dioxygenase, large terminal subunit
[Burkholderia sp. BT03]
Length = 357
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 11/206 (5%)
Query: 98 LGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCV 157
+ +T+ + +VLY+ +G +D CPHR LS G+LI ++EC YHG F+ EG CV
Sbjct: 21 MPVTILGEPVVLYRREDGTPVALEDACPHRKLPLSMGKLIGDQVECGYHGLTFDCEGACV 80
Query: 158 KIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVST 217
+ P P +IP A VR+Y + E G++W+WM + + + + P + V+
Sbjct: 81 RAPGSP---RIPPGAKVRSYPLAERYGLLWIWMGDADEADAATIVQIDEWGDPAW-GVNR 136
Query: 218 IHELPYD--HSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGK 275
+ D + + +NL+DP+H+ H + A E A+PL EV RW +
Sbjct: 137 GDAMTVDCHYLYVTDNLLDPSHVAWVHPSSFGNAACE-AEPLKTEVAAHGVT--VSRWMR 193
Query: 276 EKDEP--LPNFLRFEAPCVLQNNREL 299
+ D F+ FE C + + E+
Sbjct: 194 DVDVAPFYAQFVGFEGRCDRKQHYEV 219
>gi|405377801|ref|ZP_11031737.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
sp. CF142]
gi|397325707|gb|EJJ30036.1| ring-hydroxylating dioxygenase, large terminal subunit [Rhizobium
sp. CF142]
Length = 442
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 2/184 (1%)
Query: 83 WYPLYLTKDVPDDA-PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
W P+ ++ ++ D P+ L + +++V ++D G + + RCPHR A L G+ G +
Sbjct: 27 WIPVCMSSELKADGDPVRLMILGEKLVAFRDSEGRVGVFDHRCPHRCASLFFGRNEMGGI 86
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW+F+ GKC+ P L +K P Y VKES G+V+ +M ++ NP +L
Sbjct: 87 RCAYHGWKFDVTGKCLDQPNLEDKSKYPAGTPAIAYRVKESGGLVFAYMGEEQ-ANPPEL 145
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
P E G + ++ LE +D +H+ H K + + P F V
Sbjct: 146 PELEAIMAEGDDRNIALTHRDCNYMQALEGDIDTSHLGFLHVGGIDGEKLDLSDPEVFTV 205
Query: 262 TERT 265
TE+
Sbjct: 206 TEKA 209
>gi|390575204|ref|ZP_10255311.1| Rieske (2Fe-2S) iron-sulfur domain containing protein [Burkholderia
terrae BS001]
gi|389933006|gb|EIM95027.1| Rieske (2Fe-2S) iron-sulfur domain containing protein [Burkholderia
terrae BS001]
Length = 357
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 15/208 (7%)
Query: 98 LGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCV 157
+ +T+ + +VLY+ +G +D CPHR LS G+LI ++EC YHG F+ EG CV
Sbjct: 21 MPVTILGEPVVLYRREDGTPVALEDACPHRKLPLSMGKLIGDQVECGYHGLTFDCEGACV 80
Query: 158 KIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGF----Q 213
+ P P +IP A VR+Y + E G++W+WM + + + + P +
Sbjct: 81 RAPGSP---RIPPGAKVRSYPLAERYGLLWIWMGDADEADAATIVQIDEWGDPAWGVNRG 137
Query: 214 DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRW 273
D T+ E Y + + +NL+DP+H+ H + A E A+PL EV RW
Sbjct: 138 DAMTV-ECHYLY--VTDNLLDPSHVAWVHPSSFGNAACE-AEPLKTEVAAHGVT--VSRW 191
Query: 274 GKEKDEP--LPNFLRFEAPCVLQNNREL 299
++ D F+ FE C + + E+
Sbjct: 192 MRDVDVAPFYAQFVGFEGRCDRKQHYEV 219
>gi|40063004|gb|AAR37860.1| iron-sulfur cluster-binding protein, Rieske family [uncultured
marine bacterium 560]
Length = 346
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 12/203 (5%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WYP+ + +V +PLG+ V +++VL++ NG++ C +D+CPHR A LS G+L +G +
Sbjct: 21 QWYPVAKSVEVKSISPLGIEVLGEKLVLWRGDNGKVHCIKDQCPHRGAPLSFGRLHEGHI 80
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHG GEG V++P + + K VR +EV E ++++M ++
Sbjct: 81 SCRYHGIVVSGEGVVVRVPAM-QNCKFEGQKIVRAFEVTEIYDAIFIYMPSAENEKAPRM 139
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTA--KREDAQPLGF 259
+ + F + ++ L+NL DP H H + A +ED F
Sbjct: 140 VFPKEFLSDSWSGFLCTAVWKTNYRYALDNLADPMHGSYLHAESFTLAYGAKEDL----F 195
Query: 260 EVTERTDRGF----AGRWGKEKD 278
+V + T+ GF G+ GK D
Sbjct: 196 KV-DHTENGFIVSRTGQLGKNFD 217
>gi|421598258|ref|ZP_16041719.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
CCGE-LA001]
gi|404269631|gb|EJZ33850.1| Rieske (2Fe-2S) domain-containing protein [Bradyrhizobium sp.
CCGE-LA001]
Length = 357
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 134/326 (41%), Gaps = 38/326 (11%)
Query: 101 TVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 160
T+ + IVLY+ +G + +D C HRL LS G L + C YHG F G+C
Sbjct: 29 TICGKNIVLYRRVDGLITALEDACWHRLLPLSLGHLKGDDVMCGYHGLVFNSAGRC---S 85
Query: 161 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFE-NFARPGFQDVSTIH 219
+PA I SACVR Y V E +VW+W +P K+P F N + + T +
Sbjct: 86 YMPAQKTINPSACVRAYPVAERHRLVWLWPGDPALADPTKIPDFHWNDGKQWIGEGGTFY 145
Query: 220 ELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDE 279
+L D+ ++++NLMD H H + E F VT D RW + E
Sbjct: 146 QLKCDYRLVIDNLMDLTHETYVHAG---SIGDETITAAPFHVTHTDDTATMTRWMLDI-E 201
Query: 280 PLPNFLR---------------FEAPCVLQNNRELVDSKTG-----EKHYFTGLFLC--R 317
P P + R F+ P V+ + + + TG +G FL
Sbjct: 202 PPPFWARQLARPGRVDRWQVVTFQTPSVVVGDVGVALTNTGAPQGDRSQGVSGAFLAAIT 261
Query: 318 PTGQGKSMLIVRFGATKRSPLAKLFPKWYF-HQN-ASKVFEQDMGFLSSQNEVLMKETVP 375
P + F R A+L + H N + V++QD L +Q + K P
Sbjct: 262 PETEESCHYFWNFVRDYRKDDAQLTKELQLAHVNGGAGVYDQDHRILEAQQAAIDKN--P 319
Query: 376 TKELY-LNLRSSDTWVAEYRKWMDKV 400
Y LN+ + W R+ +D++
Sbjct: 320 RTPFYDLNIDAGALWA---RRLIDQM 342
>gi|26989931|ref|NP_745356.1| Rieske 2Fe-2S family protein [Pseudomonas putida KT2440]
gi|24984845|gb|AAN68820.1|AE016514_9 Rieske 2Fe-2S family protein [Pseudomonas putida KT2440]
Length = 341
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL-IDGRL 141
WY L L +D P T+ + +VL+K +G +DRC HR AKLS+G + +G +
Sbjct: 13 WYAL-LPMTALEDGPKPFTLLGEALVLWKRPDGTPVAMRDRCCHRTAKLSKGFVSAEGNI 71
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW+++ G CVKIPQ P A IP A V+ Y +E G WV + P +
Sbjct: 72 ACGYHGWEYDCTGTCVKIPQSPTGA-IPPGAAVKAYHCQEKYGYAWVSLDDPLQP----I 126
Query: 202 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
P F PG++ + +E + ++EN D +H H + QP +E
Sbjct: 127 PEFPEDGAPGYRRIFQFYEEWKTSPLRVMENSFDNSHFSFVHKAN--FGLFDQPQPASYE 184
Query: 261 VTERTDRGF 269
E TD GF
Sbjct: 185 FRE-TDYGF 192
>gi|187926682|ref|YP_001893027.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia pickettii 12J]
gi|241666194|ref|YP_002984553.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia pickettii 12D]
gi|187728436|gb|ACD29600.1| Rieske (2Fe-2S) domain protein [Ralstonia pickettii 12J]
gi|240868221|gb|ACS65881.1| Rieske (2Fe-2S) domain protein [Ralstonia pickettii 12D]
Length = 355
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 13/193 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V +AP+G+T Q IVL++D G++ +DRCPHR A+LS G + +
Sbjct: 21 WYPVAASWNV-KNAPVGITRLSQNIVLWRDTAGQVHALEDRCPHRGARLSMGWNLGDHVA 79
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD--- 199
C YHG + G+G +P + A + CVR+Y V+E G +++W K P D
Sbjct: 80 CWYHGVEVNGQGTVTSVPAVDA-CPMEGKTCVRSYPVQERAGAIFLWFGDKAPSEFDDAV 138
Query: 200 ---KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
+LP E ++ ++N+MDP H H + A E
Sbjct: 139 GTLRLP--EELTSDEHSHFLCFAHWNVNYRYAIDNVMDPMHGAYLHAVSHSMASGEKKAV 196
Query: 257 LGFEVTERTDRGF 269
+ EV E TD G
Sbjct: 197 M--EVVE-TDHGI 206
>gi|307727020|ref|YP_003910233.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Burkholderia
sp. CCGE1003]
gi|307587545|gb|ADN60942.1| Rieske (2Fe-2S) iron-sulfur domain protein [Burkholderia sp.
CCGE1003]
Length = 367
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V DAP+G+T QIVL++D G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQV-GDAPVGITRLGDQIVLWRDKEGKVHALEDRCPHRGARLSLGWNLGGSVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G G K+P + A + CV++Y +E G +++W P L
Sbjct: 85 CWYHGIEVNGSGTVTKVPAVSA-CPLEGQKCVKSYPAQEHAGAIFLWFGDDAHKEPAPLQ 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ + + ++ ++N+MDP H H
Sbjct: 144 LPQELVGEEYASFLCMSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|282900953|ref|ZP_06308886.1| hypothetical protein CRC_02369 [Cylindrospermopsis raciborskii
CS-505]
gi|281194044|gb|EFA69008.1| hypothetical protein CRC_02369 [Cylindrospermopsis raciborskii
CS-505]
Length = 354
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 150/345 (43%), Gaps = 39/345 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + + + + I+ +D NG++ +D CPHR LS G+ ++E
Sbjct: 13 WYYALPSSQLKTGKMVSRVLLKEPILFTRDKNGQVFAIEDICPHRAVPLSCGRFDGEQVE 72
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW+F +GKC +IP L + I S V++Y V E+QG +W++M K P P
Sbjct: 73 CCYHGWRFNSQGKCTEIPSLLPEQSIDLSRFNVKSYPVYETQGNIWIYMYDKEGP-PINA 131
Query: 202 PWFENFARPGFQ----DVSTIHELP--YDHSILLENLMDPAHIPISHDRTDWTAKREDAQ 255
+ PGF D+ + + P DH++ LMDPAH P H W + + +
Sbjct: 132 EIGDIPQVPGFSNREPDLVEVMKFPCFIDHAV--TGLMDPAHSPYVHQVWWWRSGKLHEE 189
Query: 256 PLGFEVTERTDRGFAGRWGKEKDEP-------------LPNF-LRFEAPCVLQNNRELVD 301
F + +D GF R K D +P + F P V ++
Sbjct: 190 VKQF---DPSDYGFTVRRHKLSDNTENMSRLYWLVGGGIPEVEISFRLPGV------RIE 240
Query: 302 SKTGEKHYFTGLFLCRPTGQGKSML-IVRFGATK----RSPLAKLFPKWYFHQNASKVFE 356
T KH L P ++ + V +G +PL ++ + + Q+ + V +
Sbjct: 241 EITFGKHRVCNLTAVTPISDTETEVNFVLYGIPNWLKIFTPLIQILTRRFLDQDRNVVEK 300
Query: 357 QDMGFLSSQNEVLMKETVPTKELYLNLRSSDTWVA-EYRKWMDKV 400
Q +G + L+K++ + Y L+ + A E R++++ V
Sbjct: 301 QQIGLQYNPVLRLIKDSDMQAQWYFQLKREFSRAAVENREFVNPV 345
>gi|53721314|ref|YP_110299.1| Rieske iron-sulfur protein [Burkholderia pseudomallei K96243]
gi|52211728|emb|CAH37726.1| putative rieske iron-sulfur protein [Burkholderia pseudomallei
K96243]
Length = 315
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Query: 85 PLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI-DGRLEC 143
P+ L++ V A L + +Q +VL++D +G + +DRC HR A LS G++ DGRL+C
Sbjct: 2 PVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRVTPDGRLQC 61
Query: 144 LYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
YHGW ++G G CV IP L A ++P Y+ E G +W ++ PP + +P
Sbjct: 62 AYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWA-CARDAPPPAEAIP 120
Query: 203 WFENFAR 209
AR
Sbjct: 121 RAPRSAR 127
>gi|410942929|ref|ZP_11374670.1| vanillate O-demethylase oxygenase subunit [Gluconobacter frateurii
NBRC 101659]
Length = 351
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 10/172 (5%)
Query: 78 DW---TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
DW WYP+ L++D+ D+P+G+T+ D +V+Y+ +G++ D CPHR LS G
Sbjct: 25 DWQILARSWYPVALSRDL-GDSPMGVTLLDAPLVVYR-ADGDIVIADDLCPHRGVPLSMG 82
Query: 135 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
+ C YHG++F +G+CV++P P D+KIP +RTY V E G++W +
Sbjct: 83 NGNGKTIACAYHGFRFGQDGRCVRVPAHP-DSKIPPKLHLRTYPVVERFGLIWTCLR--- 138
Query: 195 PPNPDKLPWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISHDRT 245
P LP ++ P FQ ++ ++ +E +D AH H T
Sbjct: 139 PTGETNLPPMPHWDDPTFQQITCPWIDIKGFAGRQVEGFIDVAHFAFVHTET 190
>gi|254451458|ref|ZP_05064895.1| vanillate O-demethylase oxygenase subunit [Octadecabacter arcticus
238]
gi|198265864|gb|EDY90134.1| vanillate O-demethylase oxygenase subunit [Octadecabacter arcticus
238]
Length = 346
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 97/197 (49%), Gaps = 13/197 (6%)
Query: 100 LTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 159
+TV + + +++ GEL +D CPHR LS+G++ +EC YHG F+ G+CV
Sbjct: 23 ITVLGENVCVFRSEAGELVGLEDACPHRKLPLSKGRIKGDTVECGYHGLTFDCAGQCV-- 80
Query: 160 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGF-QDVSTI 218
P +IP +A V Y + E G+VW+WM + + + EN+ P + +
Sbjct: 81 -WAPGTGRIPSNARVHAYPLHEKYGLVWIWMGNPALADVNDIFDIENYGDPAWGMNRGDA 139
Query: 219 HELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRG-FAGRWGKEK 277
EL ++ ++ +NL+DP H+ H + T +D PL +TD G RW +
Sbjct: 140 MELDCNYLLMCDNLLDPTHVAWVHQSSFATDATKDT-PLR---VSKTDNGVIVQRWMMDH 195
Query: 278 DEPLPNF---LRFEAPC 291
EP P + + FE C
Sbjct: 196 -EPAPFYKKVVEFEGNC 211
>gi|309779717|ref|ZP_07674475.1| iron-sulfur cluster-binding protein, Rieske family [Ralstonia sp.
5_7_47FAA]
gi|349616646|ref|ZP_08895783.1| hypothetical protein HMPREF0989_04029 [Ralstonia sp. 5_2_56FAA]
gi|308921516|gb|EFP67155.1| iron-sulfur cluster-binding protein, Rieske family [Ralstonia sp.
5_7_47FAA]
gi|348612291|gb|EGY61913.1| hypothetical protein HMPREF0989_04029 [Ralstonia sp. 5_2_56FAA]
Length = 355
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 13/193 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V +AP+G+T Q IVL++D G++ +DRCPHR A+LS G + +
Sbjct: 21 WYPVAASWNV-KNAPVGITRLSQNIVLWRDTAGQVHALEDRCPHRGARLSMGWNLGDHVA 79
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD--- 199
C YHG + G+G +P + A + CVR+Y V+E G +++W K P D
Sbjct: 80 CWYHGVEVNGQGTVTSVPAVDA-CPMEGKTCVRSYPVQERAGAIFLWFGDKAPSEFDDAV 138
Query: 200 ---KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
+LP E ++ ++N+MDP H H + A E
Sbjct: 139 GTLRLP--EELTSDEHSHFLCFAHWNVNYRYAIDNVMDPMHGAYLHAVSHSMASGEKKAV 196
Query: 257 LGFEVTERTDRGF 269
+ EV E TD G
Sbjct: 197 M--EVVE-TDHGI 206
>gi|410686729|ref|YP_006963032.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
pickettii]
gi|388482580|gb|AFK33102.1| putative vanillate O-demethylase oxygenase chain A [Ralstonia
pickettii]
gi|403398307|gb|AFR43891.1| putative vanillate O-demethylase oxygenase chain A [uncultured
bacterium]
Length = 358
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 98 LGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCV 157
L T+ +Q +V ++ G + DRC HR LS G+LI ++C YHG F G+G C
Sbjct: 21 LARTLLEQPVVFFRRNEGSVAALADRCSHRRVSLSLGRLIGDEVQCGYHGLTFAGDGSCT 80
Query: 158 KIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVST 217
I P +++P SACVR+Y V E G VW+W N +P + G
Sbjct: 81 SI---PGQSRVPPSACVRSYPVVERDGFVWIWPGDPALANETLVPDYAEICSSGRYVGRP 137
Query: 218 IHELPYDHSIL--LENLMDPAHIPISHDRT 245
L + L +EN++D +H+ +H T
Sbjct: 138 AEALLVEAPFLFNIENVLDLSHVTYAHPET 167
>gi|157372201|ref|YP_001480190.1| Rieske (2Fe-2S) domain-containing protein [Serratia proteamaculans
568]
gi|157323965|gb|ABV43062.1| Rieske (2Fe-2S) domain protein [Serratia proteamaculans 568]
Length = 347
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 6/188 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + ++ ++ P+G+T +QQIV+++DG G + +DRCPHR A+LS G + R+
Sbjct: 24 WYPVLASWEIGNN-PVGITRLEQQIVVWRDGEGAIHALEDRCPHRGARLSMGWNLGDRIA 82
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G+G +P + + C+R+Y KE+ G V+++ P +L
Sbjct: 83 CWYHGVEVGGDGTVKDVPAVDR-CPLVGQKCLRSYPAKEAYGAVFLYFGVTADEEPAELT 141
Query: 203 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
+ A + + ++ LEN+MDP H H + A+ + + E
Sbjct: 142 FPPELADEAAYSNFLCTASWDCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMALEP 201
Query: 262 TERTDRGF 269
TD GF
Sbjct: 202 ---TDSGF 206
>gi|209965428|ref|YP_002298343.1| Rieske [2Fe-2S] domain-containing protein [Rhodospirillum centenum
SW]
gi|209958894|gb|ACI99530.1| Rieske [2Fe-2S] domain protein [Rhodospirillum centenum SW]
Length = 344
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 126/320 (39%), Gaps = 29/320 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + L T+ + ++ + +G +D CPHR LS G+ +E
Sbjct: 12 WYFALPGRALKRGRMLAKTLLGEPVLFGRGADGAAFALRDICPHRGIPLSCGRFDGREVE 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQKTPPN-PDK 200
C YHGW+F +G C IP L S VR+Y V+E G VW+WM P P
Sbjct: 72 CCYHGWRFGADGGCTAIPSLVEGQAFDLSRIRVRSYPVRELNGNVWIWMGSGEPDGEPPA 131
Query: 201 LPWFENFARPGFQDVSTIHELP--YDHSILLENLMDPAHIPISHDRTDWTAKR---EDAQ 255
+P FA D+ + P DH+++ LMDPAH P H W + R E A+
Sbjct: 132 MP---GFAPDRAADMVEVMAFPCFVDHAVI--GLMDPAHGPFVHRSWFWRSARSIHEKAK 186
Query: 256 -----PLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYF 310
PLGF + + + P +RF+ P + + E+ +H
Sbjct: 187 AFGPAPLGFRMKRHRPSSNSAAYRLLGGAPETE-IRFQLPGIRIEHIEV------GRHTV 239
Query: 311 TGLFLCRP-----TGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
L P T M AT PL + F + Q+ V +Q G
Sbjct: 240 VNLTTVTPLDAETTEVTNQMYWTMGWATLAKPLLRPFAAKFLRQDRDVVVQQQRGLRHDP 299
Query: 366 NEVLMKETVPTKELYLNLRS 385
+L+K+ Y L++
Sbjct: 300 ALMLIKDADTQARWYYQLKA 319
>gi|383773856|ref|YP_005452922.1| vanillate O-demethylase oxygenase iron-sulfur subunit
[Bradyrhizobium sp. S23321]
gi|381361980|dbj|BAL78810.1| vanillate O-demethylase oxygenase iron-sulfur subunit
[Bradyrhizobium sp. S23321]
Length = 349
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 142/342 (41%), Gaps = 40/342 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +V A L T+ + +V+Y+ +G + +D C HRL LS+G+L +
Sbjct: 10 WYAAAWDAEV-KPALLPRTICGKHVVMYRKADGAVAALEDACWHRLVPLSKGRLEGDTVV 68
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG ++ +G+C +P+ I SACVR Y V E +W+WM +P +P
Sbjct: 69 CGYHGLKYNSQGRCTF---MPSQETINPSACVRAYPVVERHRYIWLWMGDPALADPALVP 125
Query: 203 ---WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
W + A G D TIH + D+ ++L+NLMD H H + +A F
Sbjct: 126 DMHWNHDPAWAG--DGKTIH-VNCDYRLVLDNLMDLTHETFVHGSSIGNDAVAEAP---F 179
Query: 260 EVTERTDRGFAGRWGKEKDEPLP---------------NFLRFEAPCVLQNNRELVDSKT 304
+VT RW + EP P +RFEAPC + + + + T
Sbjct: 180 DVTHGEKTVTVTRWMR-GIEPPPFWAKQLGKSGLVDRWQIIRFEAPCTIAIDVGVAPTGT 238
Query: 305 G-----EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDM 359
G G L T + + + + + + + S +F +D
Sbjct: 239 GAPEGDRSQGVNGFVLNTITPETEKTCHYFWAFVRNYRIGEQRITTEIREGVSGIFREDE 298
Query: 360 GFLSSQNEVLMKETVPTKELY-LNLRSSDTWVAEYRKWMDKV 400
L +Q + + P + Y LN+ + W RK +D++
Sbjct: 299 LILEAQQRAM--DENPDRIFYNLNIDAGAMW---SRKLIDRM 335
>gi|195984495|gb|ACG63840.1| SxtT [Lyngbya wollei]
Length = 334
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 151/341 (44%), Gaps = 51/341 (14%)
Query: 87 YLTKDVPDDAPLGLT---VFDQQIVLYK--DGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
++ +V D P +T + ++VL++ + N ++ +QD CPHR LS G++ + L
Sbjct: 13 HVVANVEDCKPGSITTARLLGVKLVLWRSQEQNSPIQVWQDYCPHRGVPLSMGEVANNTL 72
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP-DK 200
C YHGW++ GKCV+IP P D P SA +TY +E G+VWV + NP +
Sbjct: 73 VCPYHGWRYNQAGKCVQIPAHP-DMVPPASAQAKTYHCQERYGLVWVCLG-----NPVND 126
Query: 201 LPWFENFARPGFQDVST----IHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
+P F + P + T I P+ +++N +D +H P HD W R +
Sbjct: 127 IPSFPEWDDPNYHKTYTKSYLIQASPFR---VMDNSIDVSHFPFIHD--GWLGDRNYTKV 181
Query: 257 LGFEVTERTDRGFAGRWGKE--------KDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH 308
FEV D G++ + +D+ N+ R P + S++ E
Sbjct: 182 EDFEVKVDKDGLTMGKYQFQTSRIVSHIEDDSWVNWFRLSHPLC-----QYCVSESPEMR 236
Query: 309 YFTGLFLCRPTGQGKS---MLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
L P + S MLI+ G+ +K+ ++ + EQD+ L SQ
Sbjct: 237 -IVDLMTIAPIDEDNSVLRMLIMWNGSEMLE--SKMLTEY------DETIEQDIRILHSQ 287
Query: 366 N----EVLMKETVPTKELYLNLR-SSDTWVAEYRKWMDKVG 401
+L + + T+ L + SD YR+W+ ++G
Sbjct: 288 QPARLPLLAPKQINTQGLPQEIHVPSDRGTVAYRRWLKELG 328
>gi|148253687|ref|YP_001238272.1| vanillate O-demethylase oxygenase, iron-sulfur subunit
[Bradyrhizobium sp. BTAi1]
gi|146405860|gb|ABQ34366.1| vanillate demethylase subunit A [Bradyrhizobium sp. BTAi1]
Length = 347
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 136/339 (40%), Gaps = 34/339 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +V A L T+ + +V+Y+ +G + +D C HRL LS+G+L +
Sbjct: 10 WYAAAWDAEV-KQALLPRTICGKHVVMYRKADGSIAALEDACWHRLVPLSKGRLEGDTVV 68
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F +G+C +P+ I SACVR Y E +W+WM +P +P
Sbjct: 69 CGYHGLKFSPQGRCTF---MPSQETINPSACVRAYPAVERHRFIWLWMGDPALADPATIP 125
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
P + ++ D+ ++++NLMD H H + +A F+VT
Sbjct: 126 DMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAP---FDVT 182
Query: 263 ERTDRGFAGRWGKEKDEPLP---------------NFLRFEAPCVLQNNRELVDSKTG-- 305
RW + EP P +RFEAPC + + + + TG
Sbjct: 183 HGERTATVTRWMR-GIEPPPFWAKQLGKPGLVDRWQIIRFEAPCTVTIDVGVAPTGTGAP 241
Query: 306 ---EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFL 362
G+ L T + + + L + + S +F +D L
Sbjct: 242 EGDRSQGVNGMVLNTITPETDKTCHYFWAFARNYQLTEQRLTTEIREGVSGIFREDELIL 301
Query: 363 SSQNEVLMKETVPTKELY-LNLRSSDTWVAEYRKWMDKV 400
+Q + + P + Y LN+ + W R+ +D++
Sbjct: 302 EAQQRAM--DANPGRVFYNLNIDAGAMWA---RRIIDRM 335
>gi|221209772|ref|ZP_03582753.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans CGD1]
gi|221170460|gb|EEE02926.1| Rieske (2Fe-2S) domain protein [Burkholderia multivorans CGD1]
Length = 356
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 84/160 (52%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + V + AP+G+T +QIVL++D +G++ +DRCPHR A+LS G + G +
Sbjct: 26 WYPVAPSWQVSN-APVGITRLSEQIVLWRDQDGKVHALEDRCPHRGARLSLGWNLGGSVA 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G G K+P + A+ + + CV++Y V+E G +++W P L
Sbjct: 85 CWYHGIEVDGSGTVNKVPAV-ANCPLEGTKCVKSYPVEEKAGAIFLWFGDDAHREPAPLN 143
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ + ++ ++N+MDP H H
Sbjct: 144 LPVELVADEYAHFLCMSNWKCNYQYAIDNVMDPMHGAYLH 183
>gi|254418839|ref|ZP_05032563.1| Rieske (2Fe-2S) domain protein [Brevundimonas sp. BAL3]
gi|196185016|gb|EDX79992.1| Rieske (2Fe-2S) domain protein [Brevundimonas sp. BAL3]
Length = 376
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 98/184 (53%), Gaps = 18/184 (9%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFD---QQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
+ WY + L++DV AP GL ++ + +++ + G + +D CPHR A LS G+L
Sbjct: 32 ADAWYFVALSRDV---APAGLKRYEIMGEPVLIGRTRAGAVYAMRDICPHRAAPLSAGKL 88
Query: 137 IDG-----RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWM 190
++ +EC YHGW+F +G C IP L D + VR + V+ESQG+V+VWM
Sbjct: 89 VEKPGEGETIECPYHGWRFRPDGVCAAIPSLVEDQAFEANRIKVRAFPVRESQGMVFVWM 148
Query: 191 SQ--KTPPNPD-KLPWFENFARPGFQDVSTIH-ELPYDHSILLENLMDPAHIPISHDRTD 246
+ + P PD + P F G + V + + DH+++ LMDPAH P H +
Sbjct: 149 ASDARNPMEPDHEPPVFPGVVGSGPKLVEAMEFDSHIDHAVV--GLMDPAHGPYVHQQWW 206
Query: 247 WTAK 250
W ++
Sbjct: 207 WRSE 210
>gi|365887865|ref|ZP_09426679.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3809]
gi|365336509|emb|CCD99210.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. STM 3809]
Length = 347
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 137/339 (40%), Gaps = 34/339 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++ A L T+ + +V+Y+ +G + +D C HRL LS+G+L +
Sbjct: 10 WYAAAWDAEI-KQALLPRTICGKHVVMYRKSDGTIAALEDACWHRLVPLSKGRLEGDTVV 68
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F +G+C +P+ I SACVR Y E VW+WM +P +P
Sbjct: 69 CGYHGLKFSPQGRCT---YMPSQETINPSACVRAYPAVERHRFVWLWMGDPALADPATIP 125
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
P + ++ D+ ++++NLMD H H + +A F+VT
Sbjct: 126 DMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAP---FDVT 182
Query: 263 ERTDRGFAGRWGKEKDEPLP---------------NFLRFEAPCVLQNNRELVDSKTG-- 305
RW + EP P +RFEAPC + + + + TG
Sbjct: 183 HGERTATVTRWMR-GIEPPPFWAKQLGKPGLVDRWQIIRFEAPCTVTIDVGVAPTGTGAP 241
Query: 306 ---EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFL 362
G+ L T + + + L++ + S +F +D L
Sbjct: 242 EGDRSQGVNGMVLNTITPETDKTCHYFWAFARNYQLSEQRLTTEIREGVSGIFREDELIL 301
Query: 363 SSQNEVLMKETVPTKELY-LNLRSSDTWVAEYRKWMDKV 400
+Q + + P + Y LN+ + W R+ +D++
Sbjct: 302 EAQQRAM--DENPGRVFYNLNIDAGAMWA---RRIIDRM 335
>gi|440232282|ref|YP_007346075.1| ring-hydroxylating dioxygenase, large terminal subunit [Serratia
marcescens FGI94]
gi|440053987|gb|AGB83890.1| ring-hydroxylating dioxygenase, large terminal subunit [Serratia
marcescens FGI94]
Length = 347
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V ++ P+G+T +QQIVL++D G + +DRCPHR A+LS G + R+
Sbjct: 24 WYPVLASWEVGNN-PVGITRLEQQIVLWRDAQGAIHALEDRCPHRGARLSMGWNLGDRIA 82
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G+G+ +P + + C+R+Y +E+ G V+++ P +L
Sbjct: 83 CWYHGVEVGGDGEVKDVPAVDR-CPLVGQKCLRSYPAQEAHGAVFLYFGVTADEAPPELI 141
Query: 203 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
+ + A + + ++ LEN+MDP H H + A+ + + E
Sbjct: 142 FPQELADEAAYSNFLCTASWDCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMALEP 201
Query: 262 TERTDRGF 269
TD GF
Sbjct: 202 ---TDSGF 206
>gi|334345778|ref|YP_004554330.1| Rieske (2Fe-2S) domain-containing protein [Sphingobium
chlorophenolicum L-1]
gi|334102400|gb|AEG49824.1| Rieske (2Fe-2S) iron-sulfur domain protein [Sphingobium
chlorophenolicum L-1]
Length = 351
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 76 DYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQ 135
D+ + WY L+ +V + + + +++Y+ +G+ DRCPHR A LS G+
Sbjct: 5 DHFLMKAWYAAALSTEVDGEQLFHRKILGKSVLIYRTADGKAVAMHDRCPHRFAPLSLGK 64
Query: 136 LIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 195
++ C YH +F +G+C P + IP++A V T+ ++E G +W+WM P
Sbjct: 65 RDGDQISCPYHALKFNAQGQCTHNPH--GNGHIPKAAQVDTFPIEERYGFLWIWMDPSEP 122
Query: 196 P---NPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKRE 252
PD P + P + +H LP ++ ++++N+MD +H I H + R
Sbjct: 123 DLSLLPDYSPL--DIGHPNALAHTYMH-LPVNYELIIDNVMDLSH--IDHVHGEIITTRG 177
Query: 253 DAQPLGFEVTERTDRGFAGRW 273
P+ + E T R + RW
Sbjct: 178 KLSPIVPTLRE-TARNISARW 197
>gi|453063376|gb|EMF04356.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Serratia
marcescens VGH107]
Length = 336
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 6/188 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V ++ P+G+T +QQIV+++D G++ +DRCPHR A+LS G + R+
Sbjct: 13 WYPVLASWEVGNN-PVGITRLEQQIVVWRDAEGQIHALEDRCPHRGARLSMGWNLGDRIA 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G+G +P + + C+R+Y KE+ G V+++ P KL
Sbjct: 72 CWYHGVEVGGDGTVKDVPAVDR-CPLVGQKCLRSYPAKEAYGAVFLYFGVTADEAPAKLT 130
Query: 203 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
+ + A + ++ LEN+MDP H H + A+ + + E
Sbjct: 131 FPQELADEASYSHFLCTASWNCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMALEP 190
Query: 262 TERTDRGF 269
TD GF
Sbjct: 191 ---TDSGF 195
>gi|91780663|ref|YP_555870.1| putative Rieske (2Fe-2S) protein [Burkholderia xenovorans LB400]
gi|91693323|gb|ABE36520.1| Putative Rieske (2Fe-2S) protein [Burkholderia xenovorans LB400]
Length = 314
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG 139
T W+ L + V PL + + +VL++D +G +DRCPHR L+ G++
Sbjct: 3 TGSWWAAALAESVDASRPLAVVCNGEALVLFRDASGAACALEDRCPHRRVPLALGKVTPK 62
Query: 140 RLECLYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
L+C YHGW F+G+ G C IP L AD ++P R+Y V E+ G + VW+ P +
Sbjct: 63 GLQCGYHGWTFDGKTGACTAIPNLSADERVPPRYGARSYRVAEASGFIHVWLGDGEPDDA 122
Query: 199 DKLP 202
+LP
Sbjct: 123 -RLP 125
>gi|407713699|ref|YP_006834264.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
gi|407235883|gb|AFT86082.1| vanillate monooxygenase [Burkholderia phenoliruptrix BR3459a]
Length = 350
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 127/315 (40%), Gaps = 42/315 (13%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +V D T+ + ++LY+ +GE+ DRC HR A LS G+ +
Sbjct: 7 WYVAAWSHEVEGDKLFSRTIINTPVMLYRKESGEVIALADRCCHRGAPLSLGRREGDCVR 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C+YHG +F+ +G C+ + PA +IP A VR + V E +W+WM + +P +P
Sbjct: 67 CMYHGLKFDSQGACI---EAPAQERIPLHAKVRQFPVVEQHRWIWIWMGEPELADPSTIP 123
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT-----DWTAKRE----- 252
P ++ + ++ ++ +NL+D +H+P H T D+ A R
Sbjct: 124 DTHWVDDPQWRSLPGYIHYDVNYLLICDNLLDFSHLPYVHPTTLGGGEDYAAVRPKVERI 183
Query: 253 -----------DAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVD 301
+ +P F R G RW N F P +L+ + +
Sbjct: 184 KDGVRITRWTLNTEPPPFVKAVRDWPGNVDRW---------NIYDFTIPAILRMDSGMAP 234
Query: 302 SKTG-------EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKV 354
TG + F G P +G + F L K HQ+
Sbjct: 235 VGTGAPEGKRVDAAEFHGCQALTPETEGSTHYF--FAHPHNFSLDKPEVTRSIHQSVVDA 292
Query: 355 FEQDMGFLSSQNEVL 369
F++D +S+Q+ L
Sbjct: 293 FDEDREMVSAQHRNL 307
>gi|312197430|ref|YP_004017491.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Frankia sp.
EuI1c]
gi|311228766|gb|ADP81621.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. EuI1c]
Length = 346
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 9/187 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI-DGRL 141
W+P+ + DV AP + + +VL++ +G++ DRCPHR LS G + GRL
Sbjct: 28 WHPVARSTDV-RAAPAHAELCEVPLVLWRRPSGDVAALVDRCPHRGVPLSGGAVDPAGRL 86
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWM---SQKTPPNP 198
C YH W F+G G+CV IPQ P IP R V+E+ G+VW + +Q+ P P
Sbjct: 87 RCGYHAWAFDGAGRCVDIPQQPGQ-NIPDVIAARPVRVEEAAGLVWACLVDETQQARPRP 145
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
+ P E+ P + V T+ + + +EN D H + H T A+ +P
Sbjct: 146 -RFPQIEDLGWPSY--VGTVQDWTGQAARQVENFCDIGHFSVLHTDTFGNAEVLAVEPYA 202
Query: 259 FEVTERT 265
T+ T
Sbjct: 203 VHRTDWT 209
>gi|225012927|ref|ZP_03703345.1| Rieske (2Fe-2S) domain protein [Flavobacteria bacterium MS024-2A]
gi|225002912|gb|EEG40890.1| Rieske (2Fe-2S) domain protein [Flavobacteria bacterium MS024-2A]
Length = 333
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 12/164 (7%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ + ++ + P G + DQ +VL++ +G + +D C HR LS G + + L
Sbjct: 16 WHPVGYSYEIKKETPFGTFLLDQALVLWRTSDGTVHAMRDLCIHRGTALSLGWIKNDCLV 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YH W+++ +G CV IPQ P D +IP+ A TY +E G+VWV + P P+ +P
Sbjct: 76 CPYHAWEYDKKGACVHIPQAP-DVEIPKKAKTPTYHCQEKYGLVWVSLEAPLYPLPE-IP 133
Query: 203 WFENFARPGFQDVSTIHELPYD----HSILLENLMDPAHIPISH 242
F N D ++ P+D S LEN D H P H
Sbjct: 134 EFGN------SDWKHVNTGPFDWKSSSSRQLENFTDFGHFPWVH 171
>gi|300313279|ref|YP_003777371.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Herbaspirillum seropedicae SmR1]
gi|300076064|gb|ADJ65463.1| vanillate O-demethylase oxygenase subunit oxidoreductase protein
[Herbaspirillum seropedicae SmR1]
Length = 349
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 5/160 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T D D PLG + ++IV Y+ G++ +D CPHR A LS G + +G+L
Sbjct: 7 WY-VACTPDEIDSKPLGRQICGEKIVFYRGAGGKVAAVEDFCPHRGAPLSLGFVREGQLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +GK + +P ++ C+R+Y V+E G +WVW K +P ++
Sbjct: 66 CGYHGLEMGCDGKAISMP----GQRVRGFPCIRSYPVEERYGFIWVWPGDKEQADPAQIH 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E P + ++ + D+ ++++NLMD H H
Sbjct: 122 HLEWADNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVH 161
>gi|188580361|ref|YP_001923806.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium populi
BJ001]
gi|179343859|gb|ACB79271.1| Rieske (2Fe-2S) domain protein [Methylobacterium populi BJ001]
Length = 357
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 89/192 (46%), Gaps = 10/192 (5%)
Query: 79 WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLID 138
W WY D+ D P T+ ++IVL+ DG G DRC HR A+LS+G D
Sbjct: 9 WRHYWYATLRLSDLAD-GPKPFTLMGERIVLFLDGEGVPAAMMDRCCHRTARLSKGWCED 67
Query: 139 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
G + C YHGW ++ G +IPQ + +PR A V++Y G WV + +
Sbjct: 68 GLIVCGYHGWAYDRHGALARIPQFSPEQVVPRLA-VKSYHCTAKYGYAWVCLEEPYA--- 123
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPL 257
+P PG++ + H++ + L+EN D AH H T + P
Sbjct: 124 -AIPEIPEDTMPGYRRIQQFHDVWKTSPLRLMENSFDNAHFAFVHQNT--FGQISQPIPE 180
Query: 258 GFEVTERTDRGF 269
+E+TE T+ GF
Sbjct: 181 KYEITE-TEYGF 191
>gi|387887922|ref|YP_006318220.1| putative rieske (2Fe-2S) domain protein [Escherichia blattae DSM
4481]
gi|414594872|ref|ZP_11444505.1| putative iron-sulfur protein [Escherichia blattae NBRC 105725]
gi|386922755|gb|AFJ45709.1| putative rieske (2Fe-2S) domain protein [Escherichia blattae DSM
4481]
gi|403194177|dbj|GAB82157.1| putative iron-sulfur protein [Escherichia blattae NBRC 105725]
Length = 340
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V AP+G+T +QIVL+++ +G ++ +DRCPHR A+LS G + R+
Sbjct: 17 WYPVLASWEV-QSAPVGITRLGEQIVLWRNQDGTVQALEDRCPHRGARLSMGWNLGDRIA 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G+G+ +P + + CVR Y V+E+ G +++W P+ L
Sbjct: 76 CWYHGVEVAGDGEVKDVPAVDR-CPLVGQKCVRRYHVQEAHGALFLWFGVTDDQAPEPLI 134
Query: 203 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
+ E + + ++ LEN+MDP H H + A+ + + E
Sbjct: 135 FPEELSDSESYSHFLCTAAWKCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMALEP 194
Query: 262 TERTDRGF 269
TD+GF
Sbjct: 195 ---TDKGF 199
>gi|386825233|ref|ZP_10112359.1| Rieske (2Fe-2S) domain-containing protein [Serratia plymuthica
PRI-2C]
gi|386377835|gb|EIJ18646.1| Rieske (2Fe-2S) domain-containing protein [Serratia plymuthica
PRI-2C]
Length = 347
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V ++ P+G+T +QQIV+++DG G + +DRCPHR A+LS G + R+
Sbjct: 24 WYPVLASWEVGNN-PVGITRLEQQIVVWRDGEGGIHALEDRCPHRGARLSMGWNLGDRIA 82
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G+G +P + + C+R+Y KE+ G V+++ P +L
Sbjct: 83 CWYHGVEVGGDGTVKDVPAVDR-CPLVGQKCLRSYPAKEAYGAVFLYFGITADEAPPELT 141
Query: 203 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
+ + A + + ++ LEN+MDP H H + A+ + + E
Sbjct: 142 FPQELADEVSYSNFLCTASWDCNYQYALENVMDPMHGTYLHSSSHSMAEGDRKADMALEP 201
Query: 262 TERTDRGF 269
TD GF
Sbjct: 202 ---TDTGF 206
>gi|308205532|gb|ADO19015.1| rieske (2Fe-2S) domain protein [Nostoc flagelliforme str.
Sunitezuoqi]
Length = 336
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + V D P + + QQ VLY++ ++ + D+CPHR A LS G L + +
Sbjct: 13 WYACEFS-SVITDKPKRVPLLSQQFVLYRNSQKQIVAFLDQCPHRGAALSNGWLENDCIR 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+++ +G C++IP I + A + TY V+E G VW++ LP
Sbjct: 72 CPYHGWKYQADGTCIEIPANQPGVPISKKARLITYPVQEKYGFVWLFWGDLPQRECPPLP 131
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
F P + V + ++ L+EN +DPAH H
Sbjct: 132 SFPEVKDPSLRSVEFEFKWNAHYTRLVENSIDPAHSAFVH 171
>gi|418532825|ref|ZP_13098722.1| vanillate monooxygenase [Comamonas testosteroni ATCC 11996]
gi|371450151|gb|EHN63206.1| vanillate monooxygenase [Comamonas testosteroni ATCC 11996]
Length = 359
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 6/201 (2%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++WY ++ D P+ T+ Q +VL++ +G + +DRC HR LS G +
Sbjct: 18 DQWYVAGFAWEL-KDQPVARTLLGQPVVLFRTADGRVAALEDRCCHRELPLSCGTVEAAG 76
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD- 199
L C YHG F EG+C++I P +IP ACV+++E++E ++W+WM PD
Sbjct: 77 LRCGYHGLLFSHEGQCLEI---PGQERIPAKACVKSFELRERDQILWIWMGATPDSVPDT 133
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
+ P + + P ++ ++ + ++ +NL+D +H+ H +T R
Sbjct: 134 EPPAYAVHSDPQYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVHLKTIGGNARVHMN-ADL 192
Query: 260 EVTERTDRGFAGRWGKEKDEP 280
+V++ D RW + D P
Sbjct: 193 KVSQDGDSVKVVRWMPDSDPP 213
>gi|217076804|ref|YP_002334520.1| oxidase-related protein [Thermosipho africanus TCF52B]
gi|419761274|ref|ZP_14287530.1| oxidase-related protein [Thermosipho africanus H17ap60334]
gi|217036657|gb|ACJ75179.1| oxidase-related protein [Thermosipho africanus TCF52B]
gi|407513580|gb|EKF48477.1| oxidase-related protein [Thermosipho africanus H17ap60334]
Length = 326
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 156/343 (45%), Gaps = 43/343 (12%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG-R 140
+WY + +K++ +G+T F +++V ++ +G + C D C HR A LS G+L++ R
Sbjct: 5 QWYIVMSSKELKKGKLVGVTRFGEKLVFWRSKDGRVNCISDICCHRGASLSHGRLLENDR 64
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C +HG++++ +GK IP + ++P V+ Y E +WVW P + K
Sbjct: 65 IMCPFHGFEYDTDGKVKVIPAFGRNVEVPERYKVKKYYTYEIADFIWVWYGDGEPTHIPK 124
Query: 201 LPWFENFARP-GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKR-------- 251
+F++ + + + + + + Y +I EN +D H+PI H T R
Sbjct: 125 --YFDDISEEFSYSEFTQVWNVNYTRAI--ENQLDVVHVPIVHYNTIGKGNRTVVDGPIV 180
Query: 252 --EDAQPLGFEVTERTDRGFAGRWGKEKD--EPLPNFLRFEAPCVLQNNRELVDSKTGEK 307
++ F V R D G + E D + +L F+ P QN+ +K
Sbjct: 181 KWQNETMFYFYVHNRVDDGTPAKKPDEIDINDISKVYLEFKFPNFWQNH-------ILDK 233
Query: 308 HYFTGLFLCRPTGQGKSMLIVRF--GATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
T F+ P + + + +RF TK + K+ + +F + + +Q
Sbjct: 234 LRVTAAFV--PIDEEHTKIYLRFYVAFTKIRFINKII------SSIGNIFNR---IVLNQ 282
Query: 366 NEVLMKETVPTK-ELYLN--LRSSDTWVAEYRKWMD--KVGHG 403
+ +++ +P K EL +N L D + EYRK + K+G+G
Sbjct: 283 DRRVVETQIPKKTELKMNEKLILGDLPIIEYRKKREELKLGNG 325
>gi|365885381|ref|ZP_09424384.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 375]
gi|365285960|emb|CCD96915.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 375]
Length = 347
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 137/339 (40%), Gaps = 34/339 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +V A + T+ + +V+Y+ +G + +D C HRL LS+G+L +
Sbjct: 10 WYAAAWDAEV-KQALMPRTICGKHVVMYRKADGTIAALEDACWHRLVPLSKGRLEGDTVV 68
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F +G+C +P+ I SACVR Y E +W+WM +P +P
Sbjct: 69 CGYHGLKFSPQGRCT---YMPSQETINPSACVRAYPAVERHRFIWLWMGDPALADPATIP 125
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
P + ++ D+ ++++NLMD H H + +A F+VT
Sbjct: 126 DMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAP---FDVT 182
Query: 263 ERTDRGFAGRWGKEKDEPLP---------------NFLRFEAPCVLQNNRELVDSKTG-- 305
RW + EP P +RFEAPC + + + + TG
Sbjct: 183 HGERTATVTRWMR-GIEPPPFWAKQLGKPGLVDRWQIIRFEAPCTVTIDVGVAPAGTGAP 241
Query: 306 ---EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFL 362
G+ L T + + + L++ + S +F +D L
Sbjct: 242 EGDRSQGVNGMVLNTITPETDKTCHYFWAFARNYQLSEQRLTTEIREGVSGIFREDELIL 301
Query: 363 SSQNEVLMKETVPTKELY-LNLRSSDTWVAEYRKWMDKV 400
+Q + + P + Y LN+ + W R+ +D++
Sbjct: 302 EAQQRAM--DENPGRVFYNLNIDAGAMWA---RRIIDRM 335
>gi|414341442|ref|YP_006982963.1| vanillate O-demethylase oxygenase subunit [Gluconobacter oxydans
H24]
gi|411026777|gb|AFW00032.1| vanillate O-demethylase oxygenase subunit [Gluconobacter oxydans
H24]
Length = 351
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 93/172 (54%), Gaps = 10/172 (5%)
Query: 78 DW---TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
DW + WYP+ L++D+ D+P+G+T+ D +V+Y+ +G++ D CPHR LS G
Sbjct: 25 DWQILAKSWYPVALSRDL-GDSPMGVTLLDAPLVVYR-VDGDIVIADDLCPHRGVPLSMG 82
Query: 135 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
+ C YHG++F +G+CV++P P D+KIP +RTY V E G++W + +
Sbjct: 83 NGNGKTIACAYHGFRFGQDGRCVRVPAHP-DSKIPPKLHLRTYPVVERFGLIWTCLRPEG 141
Query: 195 PPNPDKLPWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISHDRT 245
N +P +++ P FQ ++ ++ +E +D AH H T
Sbjct: 142 DVNLPPMPHWDD---PAFQQITCPWIDIKGFAGRQVEGFIDVAHFAFVHTET 190
>gi|194740229|gb|ACF94652.1| dioxygenase [Dolichospermum circinale AWQC173A]
Length = 287
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 20/197 (10%)
Query: 106 QIVLYK--DGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLP 163
++VL++ + N ++ +QD CPHR LS G++++ L C YHGW++ GKCV+IP P
Sbjct: 15 KLVLWRSHEQNSPIQVWQDHCPHRGVALSMGEIVNNTLVCAYHGWRYNEAGKCVQIPAHP 74
Query: 164 ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP-DKLPWFENFARPGFQDVSTIHELP 222
D P SA +TY +E G+VWV + NP + +P F + P + T L
Sbjct: 75 -DMIPPASAIAKTYHCQERYGLVWVCLG-----NPVNDIPEFPEWDDPNYHKTYTKSYLI 128
Query: 223 YDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKE----- 276
+ +++N +D +H P HD W R + FEV D G++ +
Sbjct: 129 QASAFRVMDNSLDVSHFPFIHD--GWLGDRNYTKVENFEVKLDKDGLTMGKYQFQTSRIV 186
Query: 277 ---KDEPLPNFLRFEAP 290
+D+ N+LR P
Sbjct: 187 SDIEDDSWVNWLRLSHP 203
>gi|194740227|gb|ACF94651.1| dioxygenase [Dolichospermum circinale AWQC118C]
Length = 280
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 20/197 (10%)
Query: 106 QIVLYK--DGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLP 163
++VL++ + N ++ +QD CPHR LS G++++ L C YHGW++ GKCV+IP P
Sbjct: 9 KLVLWRSHEQNSPIQVWQDHCPHRGVALSMGEIVNNTLVCAYHGWRYNEAGKCVQIPAHP 68
Query: 164 ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP-DKLPWFENFARPGFQDVSTIHELP 222
D P SA +TY +E G+VWV + NP + +P F + P + T L
Sbjct: 69 -DMIPPASAIAKTYHCQERYGLVWVCLG-----NPVNDIPEFPEWDDPNYHKTYTKSYLI 122
Query: 223 YDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKE----- 276
+ +++N +D +H P HD W R + FEV D G++ +
Sbjct: 123 QASAFRVMDNSLDVSHFPFIHD--GWLGDRNYTKVENFEVKLDKDGLTMGKYQFQTSRIV 180
Query: 277 ---KDEPLPNFLRFEAP 290
+D+ N+LR P
Sbjct: 181 SDIEDDSWVNWLRLSHP 197
>gi|397698374|ref|YP_006536257.1| rieske 2Fe-2S family protein [Pseudomonas putida DOT-T1E]
gi|397335104|gb|AFO51463.1| Rieske 2Fe-2S family protein [Pseudomonas putida DOT-T1E]
Length = 341
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 91/189 (48%), Gaps = 11/189 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL-IDGRL 141
WY L L +D P T+ + +VL+K +G QDRC HR AKLS+G + +G +
Sbjct: 13 WYAL-LPMTALEDGPKPFTLLGEALVLWKRPDGTPVAMQDRCCHRTAKLSKGFVSAEGNI 71
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW+++ G CVKIPQ P A IP A V+ Y +E G WV + P +
Sbjct: 72 ACGYHGWEYDCTGTCVKIPQNPTGA-IPPGAAVKAYHCQEKYGYAWVSLDDPLQP----I 126
Query: 202 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
P F PG++ + +E + ++EN D +H H + QP +
Sbjct: 127 PEFPEDGAPGYRRIFQFYEEWKTSPLRVMENSFDNSHFSFVHKAN--FGLFDQPQPASYA 184
Query: 261 VTERTDRGF 269
E TD GF
Sbjct: 185 FRE-TDYGF 192
>gi|398984223|ref|ZP_10690492.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
gi|399012013|ref|ZP_10714341.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398116619|gb|EJM06378.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM16]
gi|398155922|gb|EJM44349.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM24]
Length = 357
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 9/168 (5%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++WY L++++ D PLG T+ ++ +VL++ + ++ +DRC HR LS G +
Sbjct: 23 DQWYVAALSREL-KDQPLGRTLLNKPVVLFRTADNQVAALEDRCCHRALPLSNGTVEARG 81
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
L C YHG F+ GKC++I P KIP A V Y V+E ++W+W P P
Sbjct: 82 LRCGYHGLLFDDGGKCIEI---PGQDKIPSKAKVPAYPVREQDQIIWIWFGSAEHPQPTF 138
Query: 201 LPWFENFARPG---FQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
P + G F ++ PY ++ +NLMD +H+ H T
Sbjct: 139 APPVYDVHSSGKYLFDGDVYHYDAPY--QLIHDNLMDLSHLGYVHLHT 184
>gi|119513068|ref|ZP_01632123.1| hypothetical protein N9414_17747 [Nodularia spumigena CCY9414]
gi|119462278|gb|EAW43260.1| hypothetical protein N9414_17747 [Nodularia spumigena CCY9414]
Length = 341
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 15/170 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + V + P + +F+Q+ VLY++ G++ D+CPHR A S G + L
Sbjct: 6 WYACEFSSAV-TNKPKQVLMFNQRFVLYRNSQGQIIALNDQCPHRGAAFSLGWVEKDCLR 64
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F+ +GKCV+IP + IP+ A V +Y V+E G VW++ S LP
Sbjct: 65 CPYHGWKFQADGKCVEIPSNAPETPIPKKAHVDSYPVEEKYGFVWLFYSDLPAAKRPLLP 124
Query: 203 WFENFARPGFQDVSTIHELPYDHSI-------LLENLMDPAHIPISHDRT 245
F + VST+ + YD I L+E +D H+ H ++
Sbjct: 125 TFPEYM------VSTMRPV-YDDGIDNANYARLMEANLDFTHVIAVHKKS 167
>gi|444916892|ref|ZP_21237000.1| iron-sulfur cluster-binding protein, Rieske family [Cystobacter
fuscus DSM 2262]
gi|444711538|gb|ELW52477.1| iron-sulfur cluster-binding protein, Rieske family [Cystobacter
fuscus DSM 2262]
Length = 395
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 150/362 (41%), Gaps = 57/362 (15%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L+ ++ PL T F ++VL++D G+ DRC HR A+LS G + GRL
Sbjct: 36 WYVACLSSELTSREPLARTFFGTRVVLFRDERGQPVALLDRCLHRNARLSAGAVFGGRLG 95
Query: 143 CLYHGWQFEGEGKCVKIPQLP-------------ADAKIPRSAC----VRTYEVKESQGV 185
C YHGW ++G G V++P L A A + C VR ++ E G+
Sbjct: 96 CPYHGWVYDGSGAVVEVPSLGPSQCGESLDAQGHARAGLQVRPCDLGRVRRFDTLEQDGL 155
Query: 186 VWVWM---SQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
V+V+M S++ ++P+ + +P + + P + L+EN MD H H
Sbjct: 156 VFVFMGGDSRRARRPAFRVPF---WGQPEWNVYFMVTRFPNGVTNLVENFMDVPHTVFVH 212
Query: 243 D---------RTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVL 293
+ R T KR + L E+ GR P+ + F AP V
Sbjct: 213 EGWFRRKARKRVPATVKRSEGSVLVTYKQEQDTVTGLGRLFNPGGLPMVHTDHFFAPNVT 272
Query: 294 QNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLI--VRFGATKRSPLA------KLFPKW 345
+ VD GE+ F P G S++ + + P A K +W
Sbjct: 273 R-----VDYMWGERSGFAINSQITPIGPTDSLVYTAISYRLPYDLPRALVGQALKPLVRW 327
Query: 346 YFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELY----LNLRSSDTWVAEYRKWMDKVG 401
Y ++V QD+ + Q E L+ P ++ +L +D + YR+W+ + G
Sbjct: 328 Y----TTQVIRQDVEVMKVQREGLLNG--PGGGVFSGTEADLLHAD--IEAYRRWLLEGG 379
Query: 402 HG 403
G
Sbjct: 380 EG 381
>gi|338530424|ref|YP_004663758.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
gi|337256520|gb|AEI62680.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
fulvus HW-1]
Length = 357
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 128/310 (41%), Gaps = 39/310 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+ L + ++ D PL T+ +VL++ G+ DRCPHR LS G++ +G+L+
Sbjct: 20 WFILCASNEL-GDKPLARTLQGSPLVLFRGEGGKPAALVDRCPHRNVPLSLGRVKEGQLQ 78
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 200
C YHGW+F+GEG+C IP + R+ C + +E G VWV+ + P P +
Sbjct: 79 CGYHGWRFDGEGQCRAIPGFLGEPGA-RARCATAHATREQDGFVWVYSTPGVEPTTEPYR 137
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH----------DRTDWTAK 250
P E AR + V I P LEN +D H H + + +
Sbjct: 138 FPLLE--ARE-YTTVRRILRAPGSLHATLENTLDVPHTAYLHGGLFRTEEKRNEIEVVVR 194
Query: 251 REDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYF 310
R + + E G G+ + +F RF P + Q V+ + G+ +
Sbjct: 195 RGADKVEAEYIGEPRPSGLVGKLLAPGGGVVQHFDRFLMPSIAQ-----VEYRIGDASHI 249
Query: 311 TGLFLCRPTGQGKSML--IVRFGATKRSPLAKLFPKWYFHQN-------ASKVFEQDMGF 361
P + +++ +V F R P+ P+W A +F QD
Sbjct: 250 MVTSAMTPVSEWDTLVYAVVTF----RLPV----PRWLVRAALPLIMPVALHIFGQDARI 301
Query: 362 LSSQNEVLMK 371
L Q E + +
Sbjct: 302 LRQQTETIRR 311
>gi|87199889|ref|YP_497146.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135570|gb|ABD26312.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 356
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY D+ + P T ++ + L++DG+GE + RCPHR A L G ++DG L
Sbjct: 23 WYVAGWASDLAGE-PQQRTFLEEPVALFRDGHGEAKAIGGRCPHRFAPLGHGSVVDGALM 81
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F+G+G+CV P +P A R Y + E ++W+WM +P +P
Sbjct: 82 CPYHGLRFDGDGRCVHNPH--PGGHLP-DARQRVYPLVERHALLWIWMGDAAKADPASIP 138
Query: 203 WFENFARPGFQDV--STIHELPYDHSILLENLMDPAHIPISH 242
F + P ++ V +T+ E ++ + +N++D +H H
Sbjct: 139 DFSWLSDPRWEAVRGATVAEGHFE--LYSDNILDLSHANFVH 178
>gi|282897231|ref|ZP_06305233.1| sxtH (Rieske (2Fe-2S) region protein) [Raphidiopsis brookii D9]
gi|114462356|gb|ABI75098.1| phenylpropionate dioxygenase [Cylindrospermopsis raciborskii T3]
gi|194740221|gb|ACF94648.1| dioxygenase [Cylindrospermopsis raciborskii T3]
gi|281197883|gb|EFA72777.1| sxtH (Rieske (2Fe-2S) region protein) [Raphidiopsis brookii D9]
Length = 334
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 140/344 (40%), Gaps = 36/344 (10%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK--DGNGELRCYQDRCPHRLAKLS 132
AD WY + +D + + ++VL++ + N ++ +QD CPHR LS
Sbjct: 4 ADLILINNWYVVAKVEDCKPGSITTALLLGVKLVLWRSREQNSPIQIWQDYCPHRGVALS 63
Query: 133 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ 192
G++++ L C YHGW++ GKCV IP P D P SA + Y +E G+VWV +
Sbjct: 64 MGEIVNNTLVCPYHGWRYNQAGKCVHIPAHP-DMTPPASAQAKIYHCQERYGLVWVCLGD 122
Query: 193 KTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKR 251
+ +P + P + + T + +++N +D +H P HD R
Sbjct: 123 PV----NDIPSLPEWDDPNYHNTCTKSYFIQASAFRVMDNFIDVSHFPFVHDGG--LGDR 176
Query: 252 EDAQPLGFEVTERTDRGFAGRW--------GKEKDEPLPNFLRFEAPCVLQNNRELVDSK 303
AQ FEV D G +D+ + R P E + +
Sbjct: 177 NHAQIEEFEVKVDKDGISIGNLKLQMPRFNSSNEDDSWTLYQRISHPLCQYYITESSEIR 236
Query: 304 TGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLS 363
T + L L P + S++ + + L + + + EQD+ +
Sbjct: 237 TAD------LMLVTPIDEDNSLVRMLVTWNRSEILESTVLEEF-----DETIEQDIPIIH 285
Query: 364 SQNEVLMKETVPTKELYLNLRS------SDTWVAEYRKWMDKVG 401
SQ + +P+K++ + S SD YR+W+ ++G
Sbjct: 286 SQQPARLP-LLPSKQINMQWLSQEIHVPSDRCTVAYRRWLKELG 328
>gi|146338927|ref|YP_001203975.1| vanillate O-demethylase oxygenase [Bradyrhizobium sp. ORS 278]
gi|146191733|emb|CAL75738.1| vanillate O-demethylase oxygenase, iron-sulfur subunit (modular
protein=subunit from monooxygenase) (vanA-like)
[Bradyrhizobium sp. ORS 278]
Length = 347
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 137/339 (40%), Gaps = 34/339 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +V A L T+ + +V+Y+ +G + +D C HRL LS+G+L +
Sbjct: 10 WYAAAWDAEV-KQALLPRTICGKHVVMYRKADGAIAALEDACWHRLVPLSKGRLEGDTVV 68
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F +G+C +P+ I SACVR Y E +W+WM +P +P
Sbjct: 69 CGYHGLKFSPQGRCT---YMPSQETINPSACVRAYPAVERHRFIWLWMGDPALADPATIP 125
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
P + ++ D+ ++++NLMD H H + +A F+VT
Sbjct: 126 DMHWNHDPAWAGDGKTIQVKCDYRLVVDNLMDLTHETFVHGSSIGNDAVAEAP---FDVT 182
Query: 263 ERTDRGFAGRWGKEKDEPLP---------------NFLRFEAPCVLQNNRELVDSKTG-- 305
RW + EP P +RFE+PC + + + + TG
Sbjct: 183 HGERTATVTRWMR-GIEPPPFWAKQLGKPGLVDRWQIIRFESPCTVTIDVGVAPTGTGAP 241
Query: 306 ---EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFL 362
G+ L T + + + L++ + S +F +D L
Sbjct: 242 EGDRSQGVNGMVLNTITPETDKTCHYFWAFARNYKLSEQRLTTEIREGVSGIFREDEFIL 301
Query: 363 SSQNEVLMKETVPTKELY-LNLRSSDTWVAEYRKWMDKV 400
+Q + + P + Y LN+ + W R+ +D++
Sbjct: 302 EAQQRAM--DENPGRVFYNLNIDAGAMWA---RRIIDRM 335
>gi|89056443|ref|YP_511894.1| Rieske (2Fe-2S) protein [Jannaschia sp. CCS1]
gi|88865992|gb|ABD56869.1| vanillate demethylase subunit A [Jannaschia sp. CCS1]
Length = 340
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 94/201 (46%), Gaps = 4/201 (1%)
Query: 101 TVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 160
T + +VLY+ +G +D CPHR LS+G L +EC YHG F+ G CV P
Sbjct: 24 TFLGENVVLYRKQDGTPVALEDACPHRKLPLSDGALQGDTVECGYHGLTFDCAGACVAAP 83
Query: 161 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDV-STIH 219
DA IP+ A V++Y V + W+WM +PD + NF P + +
Sbjct: 84 TQ-KDA-IPKRATVKSYPVVDRYRFTWIWMGDPAEADPDLIFPIPNFDDPTWGKTDGGVL 141
Query: 220 ELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDE 279
++ ++ +++NL+DP+H+ H T + D PL + TE + +G+
Sbjct: 142 DIDCNYLWVVDNLLDPSHVAWVH-VTSFAGGGTDGAPLQVDKTEHGVQVTRWIFGEPPSP 200
Query: 280 PLPNFLRFEAPCVLQNNRELV 300
N L F+ PC + E+
Sbjct: 201 YYENLLAFQGPCDRLQHYEMT 221
>gi|92112267|ref|YP_572195.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
gi|91795357|gb|ABE57496.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
Length = 343
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 6/188 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V + PLG+T + +VL++D GE+ +DRCPHR A+LS G + RL
Sbjct: 23 WYPVVASWEVGSE-PLGITRLGENLVLWRDHQGEIHAIEDRCPHRGARLSMGWNLGDRLA 81
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + + G +P + A++ + CVR Y V+E+ G V+V+ + P L
Sbjct: 82 CWYHGVEVDNAGVVRDVPAI-ANSPLVDKPCVRRYPVQEANGAVFVYFAATADETPAPLT 140
Query: 203 WFENFA-RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
E A + + ++ ++N+MDP H H + A+ + + E
Sbjct: 141 LPEQLADETAYANFVCTASWQCNYQYAVDNVMDPMHGTYLHANSHSMAEGDRQAEMALEP 200
Query: 262 TERTDRGF 269
TD GF
Sbjct: 201 ---TDSGF 205
>gi|89054066|ref|YP_509517.1| Rieske (2Fe-2S) protein [Jannaschia sp. CCS1]
gi|88863615|gb|ABD54492.1| vanillate O-demethylase oxygenase subunit [Jannaschia sp. CCS1]
Length = 346
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 13/197 (6%)
Query: 100 LTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 159
+ V ++I +++ +G+L +D CPHR LS+G++ +EC YHG F G CV
Sbjct: 23 IMVLGEKICMFRTQSGDLVALEDACPHRKLPLSKGRIKGDTVECGYHGLTFNCAGTCV-- 80
Query: 160 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 218
P + IP +A V Y + E G++W+WM +P + EN+ P + +
Sbjct: 81 -WAPGASGIPSNARVHAYPLAEKYGLIWIWMGNPALADPSDIFEIENYGNPDWGINRGAA 139
Query: 219 HELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRG-FAGRWGKEK 277
EL ++ ++ +NL+DP H+ H ++ + A+ PL VT +TD G RW +
Sbjct: 140 MELDCNYLLMCDNLLDPTHVAWVH-QSSFAAEATKDTPL--HVT-KTDTGIIVHRWMMDH 195
Query: 278 DEPLPNF---LRFEAPC 291
D P P + + F+ C
Sbjct: 196 D-PAPFYKKVVEFDGNC 211
>gi|170743866|ref|YP_001772521.1| Rieske (2Fe-2S) domain-containing protein [Methylobacterium sp.
4-46]
gi|168198140|gb|ACA20087.1| Rieske (2Fe-2S) domain protein [Methylobacterium sp. 4-46]
Length = 354
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 15/190 (7%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + ++ + +T+ ++ IV+ + G L +DRCPHR LS G+L++GRL
Sbjct: 24 WYCVGESRRFREGRLCAVTLGEEAIVVGRAAGGGLFALRDRCPHRGMALSAGRLVEGRLV 83
Query: 143 CLYHGWQFEGEGKCVKIPQLPA-DAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C +HGW+F +G+C IP L A D R+ + + V+E+ G+VW+ + P PD
Sbjct: 84 CPFHGWEFRPDGQCAAIPALAARDESDFRTVRLPRFSVREASGLVWIAAGE---PRPDAP 140
Query: 202 PWFE-NFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD----RTDWTAKREDAQ- 255
P E F G + E +D L + +DPAH+ HD RT T + ++
Sbjct: 141 PIPEVEFPYAGMLVETLEVEASFDLVAL--SFVDPAHVAYVHDLWWWRTSKTLREKEKHF 198
Query: 256 ---PLGFEVT 262
P GF +T
Sbjct: 199 APSPFGFTMT 208
>gi|152995325|ref|YP_001340160.1| Rieske (2Fe-2S) domain-containing protein [Marinomonas sp. MWYL1]
gi|150836249|gb|ABR70225.1| Rieske (2Fe-2S) domain protein [Marinomonas sp. MWYL1]
Length = 367
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 4/160 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++++V PLG + + I Y+ + E+ D CPHR A LS G + DG L
Sbjct: 11 WYVAAMSEEVAGSKPLGRKICGESIAFYRSHDNEIAAVLDFCPHRGAALSLGYVEDGLLV 70
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +GK ++P ++ C+++Y V+E G +WVW ++ + D +P
Sbjct: 71 CGYHGLKMGADGKTKEMPL----QRVKGFPCMKSYAVEERYGFIWVWPGDQSQADKDLIP 126
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E P + ++ + D+ ++++NLMD H H
Sbjct: 127 HLEWAVNPEWAYGGGLYHINCDYRLMVDNLMDLTHETYVH 166
>gi|407713704|ref|YP_006834269.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
gi|407235888|gb|AFT86087.1| Vanillate O-demethylase oxygenase subunit [Burkholderia
phenoliruptrix BR3459a]
Length = 347
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 12/219 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY D+ D + T+ + ++LY+ NG +RCPHR A LS G +
Sbjct: 8 WYCAGWGADLGQDDLIDRTILKESVLLYRKQNGLAVAIGNRCPHRFAPLSSGCKKGDNVA 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F G+CV P D P++A V Y + E +W+WM + D++P
Sbjct: 68 CPYHGLTFGPSGECVLNPH--GDGTTPKAARVTRYPLVERYDALWIWMGDPELADADEIP 125
Query: 203 WF-ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
F E+ R G+ + E+P + +L +NL+D +H+P H + QP GF
Sbjct: 126 DFSESSLREGWGHIRGHLEVPVHYELLTDNLLDLSHVPYLHP----FLSAQGPQPDGFRE 181
Query: 262 TERTDRGFAGRWGKEKD-----EPLPNFLRFEAPCVLQN 295
+ W ++ PL L +AP V++
Sbjct: 182 ERELKQDGNTVWSMHRNLNTVTTPLFRLLWEDAPEVIEG 220
>gi|255065254|ref|ZP_05317109.1| phenylpropionate dioxygenase [Neisseria sicca ATCC 29256]
gi|255050675|gb|EET46139.1| phenylpropionate dioxygenase [Neisseria sicca ATCC 29256]
Length = 330
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 125/292 (42%), Gaps = 25/292 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYPL +K + D P+ + QQ+VL + NG+ C D CPHR LS G+++ G+L+
Sbjct: 10 WYPLIPSKQL-KDKPVHRELLGQQLVLVR-LNGQAACMDDCCPHRHVPLSAGKIVSGKLQ 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F+ +GK + + + + V T+ +E VWV + P P
Sbjct: 68 CCYHGWEFDAQGKVLTV--VGGMCACEEAESVPTFPCREYDDWVWVCLVSDIPFEP---- 121
Query: 203 WFENFARP-GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ------ 255
+ +F P GF+ + + + D +EN +DP H H + R+ Q
Sbjct: 122 -YADFEAPEGFETANAVRYMEGDFIHAIENFLDPTHTRYIHAKLLRNNGRQSMQISQSHH 180
Query: 256 PLGFEVTERTDRGFAGRWGKEKDEPLP-NFLRFEAPCVLQNNRELVDSKTGEKHYFTGLF 314
GF R ++ G K D+ + N F P +++ +D T H +
Sbjct: 181 ERGFVTHYRLNQQQNGLINKLFDKGITVNDAAFTFPGLVR-----IDYFTPNSHEYRISA 235
Query: 315 LCRPTGQGKSMLIVRFGATK-RSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
P +G L VR K R PL F F ++ QD + SQ
Sbjct: 236 FFIPQNKGSMGLNVRVHFPKSRFPLPIKF--HLFRPFLERLMVQDSAIIKSQ 285
>gi|239820953|ref|YP_002948138.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
gi|239805806|gb|ACS22872.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 341
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 87/171 (50%), Gaps = 19/171 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + ++ DDA TV D+ I++Y+ GEL QDRC HR A LS G+ +
Sbjct: 7 WYVIAWDHEISDDALFTRTVLDEPILVYRTEGGELVAMQDRCCHRHAPLSRGRREGDCVR 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F +G CV+ P L A IP A VRTY V ++VWM + + LP
Sbjct: 67 CGYHGLKFAADGVCVEAPGL---ASIPVKARVRTYPVVSHNKWIFVWMGDPSLADRALLP 123
Query: 203 WFENFA--------RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
+NF+ RPG+ T PY ++ +NL+D +H+ H+ T
Sbjct: 124 --DNFSCDHPDWRYRPGYVHYDT----PY--LLVCDNLLDFSHLSYVHEGT 166
>gi|124266000|ref|YP_001020004.1| vanillate O-demethylase oxygenase subunit [Methylibium
petroleiphilum PM1]
gi|124258775|gb|ABM93769.1| vanillate O-demethylase oxygenase subunit [Methylibium
petroleiphilum PM1]
Length = 331
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 21/181 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG--QLIDGR 140
WYP+ D+ PL +F + +VL++D G + DRCPHR +LS G +++DGR
Sbjct: 8 WYPVATAADL-GAGPLPAALFGEDLVLWRDEAGTPHAFTDRCPHRGTRLSLGAVRVVDGR 66
Query: 141 --LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWM-------S 191
LEC YHGW+F+G G+C++IP LP D R + ++E+ G++WV + +
Sbjct: 67 AQLECPYHGWRFDGGGRCLRIPALP-DFTPATGHAARAHPLREAHGLLWVVLGGDANLET 125
Query: 192 QKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKR 251
T PD P PG V +++ ++EN +D +H H+ W R
Sbjct: 126 VATACLPDPGP------VPGRAVVCGHYDVGTSAPRVVENFLDTSHFAFVHE--GWLGDR 177
Query: 252 E 252
+
Sbjct: 178 D 178
>gi|399909695|ref|ZP_10778247.1| vanillate monooxygenase [Halomonas sp. KM-1]
Length = 354
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 5/174 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T D D PLG T+ ++ IVL++ G + +D CPHR A LS G + DG+L
Sbjct: 12 WY-VACTPDEIADKPLGRTICNEPIVLFRGDEGRVAAVEDFCPHRGAPLSLGFVRDGKLV 70
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +GKC +P ++ +R Y V+E G VW+W +P+ +P
Sbjct: 71 CGYHGLEMGCDGKCAGMP----GQRVRGFPSIRAYPVEERHGFVWLWPGDPEQADPNLIP 126
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
P + ++ + ++ ++++NLMD H H + + E+A P
Sbjct: 127 ELHWANNPDWAYGGGLYHIHCEYRLMIDNLMDLTHETYVHASSIGQPEIEEAAP 180
>gi|418395193|ref|ZP_12969211.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 354a]
gi|418555062|ref|ZP_13119808.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 354e]
gi|385369262|gb|EIF74606.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 354e]
gi|385374223|gb|EIF79138.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 354a]
Length = 315
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 85 PLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI-DGRLEC 143
P+ L++ V A L + +Q +VL++D +G + +DRC HR A LS G++ DGRL+C
Sbjct: 2 PVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRVTPDGRLQC 61
Query: 144 LYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP 196
YHGW ++G G CV IP L A ++P Y+ E G +W PP
Sbjct: 62 AYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAPPP 115
>gi|340777753|ref|ZP_08697696.1| vanillate O-demethylase oxygenase subunit [Acetobacter aceti NBRC
14818]
Length = 349
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 5/116 (4%)
Query: 78 DWT---EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
DWT W+P+ L++++ APLG+T+ D +VLY+ G G + D CPHR LS G
Sbjct: 22 DWTILAACWHPVALSRELTHSAPLGVTLLDAPLVLYRSG-GSIVVADDLCPHRGVPLSMG 80
Query: 135 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWM 190
L C YHG++F EG+CV +P P D+ IP+ +RTY E G++W +
Sbjct: 81 TCKGDLLACAYHGFEFGAEGRCVHVPAHP-DSGIPKKLNLRTYPAVERYGLIWTCL 135
>gi|227015885|gb|ACP17982.1| putative vanillate-O-demethylase oxidoreductase a-subunit
[Pseudomonas nitroreducens]
Length = 354
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T D D PLG + +++IV Y+ G + +D CPHR A LS G + DG+L
Sbjct: 7 WY-VACTPDEIADKPLGRQICNEKIVFYRGAEGRVAAVEDFCPHRGAPLSLGFVRDGKLI 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + EGK + +P ++ C+++Y V+E G +WVW + +P +
Sbjct: 66 CGYHGLEMGCEGKTLAMP----GQRVQGFPCIKSYAVEERYGFIWVWPGDRELADPALIH 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E P + ++ + D+ ++++NLMD H H
Sbjct: 122 HLEWADNPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVH 161
>gi|148557174|ref|YP_001264756.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148502364|gb|ABQ70618.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 362
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 96 APLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 155
APL + + +VLY+ GE+ DRCPHR LS+G LI RL C YHG++F +G+
Sbjct: 37 APLSRQILGRSVVLYRTEAGEVAALPDRCPHRFMPLSQGWLIGDRLRCAYHGFEFGPDGR 96
Query: 156 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDV 215
C I P+ +P + +R Y V E VW+W +P LP +++RPG+
Sbjct: 97 CAHI---PSQGVVPGTMRIRPYPVVEHGLWVWIWPGDPELADPALLP--PDYSRPGYDSF 151
Query: 216 STIHELPYDHSI-LLENLMDPAHIPISHD 243
H + L ENL+D H H+
Sbjct: 152 VHFQASVKCHFLKLQENLLDSTHPTFLHE 180
>gi|114050057|emb|CAK51082.1| putative vanillate O-demethylase oxygenase subunit A [Streptomyces
ambofaciens]
Length = 362
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 130/334 (38%), Gaps = 35/334 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +V PL TV + L++ G D C HRLA LS+G+++ L+
Sbjct: 29 WYVAAWDHEVTGKQPLARTVAGIPLALWRTTEGRAIALADACWHRLAPLSKGRILGDELQ 88
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG ++ G+C +PA I SA V +Y V E VWVW+ +P +P
Sbjct: 89 CPYHGLRYNATGRCTG---MPAQETINPSAVVPSYPVVERYRYVWVWVGDPDLADPATVP 145
Query: 203 WFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
P + D TIH ++ ++L+NLMD H H + +E+ F+V
Sbjct: 146 DMHQMDDPTWAGDGETIHA-DCNYQLILDNLMDLTHEEFVHSS---SIGQEELSEAEFDV 201
Query: 262 TERTDRGFAGRWGKEKDEP----------LPNF---------LRFEAPCVLQNNRELVDS 302
T + RW ++ D P P F + FEAP ++ + + +
Sbjct: 202 THEGNTVTVTRWMRDIDAPPFWLKNMRDKFPGFSGKVDRWQIITFEAPGTIRIDVGVAKA 261
Query: 303 KTG-----EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQ 357
TG G + T + + + L Q VF +
Sbjct: 262 GTGAPEGDRTQGVNGYVMNTITPETDRTSHYFWAFMRNYRLDSQTITTQLRQAVHGVFGE 321
Query: 358 DMGFLSSQNEVLMKETVPTKELY-LNLRSSDTWV 390
D L +Q + + P E Y LN+ + WV
Sbjct: 322 DEEMLCAQQRAI--DANPEHEFYSLNIDAGGMWV 353
>gi|386864034|ref|YP_006276982.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 1026b]
gi|418535107|ref|ZP_13100906.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 1026a]
gi|418542753|ref|ZP_13108164.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 1258a]
gi|418549280|ref|ZP_13114348.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 1258b]
gi|385354727|gb|EIF60970.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 1258a]
gi|385355533|gb|EIF61709.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 1258b]
gi|385356798|gb|EIF62884.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 1026a]
gi|385661162|gb|AFI68584.1| Rieske iron-sulfur protein [Burkholderia pseudomallei 1026b]
Length = 315
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 85 PLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI-DGRLEC 143
P+ L++ V A L + +Q +VL++D +G + +DRC HR A LS G++ DGRL+C
Sbjct: 2 PVALSEQVSGRAALAVICMEQPLVLFRDASGAVCAMEDRCAHRRAPLSLGRVTPDGRLQC 61
Query: 144 LYHGWQFEGE-GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP 196
YHGW ++G G CV IP L A ++P Y+ E G +W PP
Sbjct: 62 AYHGWTYDGATGACVAIPNLSASERVPAHYAAHAYKTLERDGFIWACARDAPPP 115
>gi|358458104|ref|ZP_09168317.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
gi|357078670|gb|EHI88116.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
Length = 362
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 15/173 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKD------GNGELRCYQDRCPHRLAKLSEGQL 136
W+P+ + DV AP+ + ++VL++ G G + DRCPHR LS G++
Sbjct: 38 WHPVARSSDV-GAAPVRALLLGVELVLWRRPTSGSAGPGTVAALVDRCPHRSVPLSSGEI 96
Query: 137 -IDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 195
DGRL C YH W F+G G+CV IPQ P ++P R V E+ G+VW ++ +
Sbjct: 97 DADGRLRCSYHAWAFDGAGRCVDIPQQPGQ-RVPDLIAARPVRVAEAAGLVWACLADEAD 155
Query: 196 ---PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
P P + P E+ P + V T+ + + +EN D H + H T
Sbjct: 156 EARPRP-RFPEIEDLGWPHY--VGTVQDWAGQAARQVENFCDVGHFSVLHTDT 205
>gi|357030373|ref|ZP_09092317.1| hypothetical protein GMO_00170 [Gluconobacter morbifer G707]
gi|356415067|gb|EHH68710.1| hypothetical protein GMO_00170 [Gluconobacter morbifer G707]
Length = 203
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 8/143 (5%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+W+PL L DVP + +I L++ +G++ ++DRCPHR +LS G + DG L
Sbjct: 3 DWFPLALCVDVPSGTAAPARLRGAEIALWRGPDGQIHAWEDRCPHRGMRLSFGFVRDGNL 62
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
CLYHGWQF + C IP P + ++P + Y+V+E G+VWV S + +L
Sbjct: 63 ACLYHGWQFGADAACRHIPAHP-ELRVPGTIRATAYKVEERAGMVWV--SLDGDADAAEL 119
Query: 202 PWFENFARPGFQDVSTIHELPYD 224
P + GF S + ++P D
Sbjct: 120 P-----DQSGFGARSLLVQVPVD 137
>gi|307546530|ref|YP_003899009.1| vanillate monooxygenase [Halomonas elongata DSM 2581]
gi|307218554|emb|CBV43824.1| vanillate monooxygenase [Halomonas elongata DSM 2581]
Length = 383
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 7/196 (3%)
Query: 61 GPASAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCY 120
GP + EE+ Q A Y WY + T D +D PLG T+ ++ IV ++ G +
Sbjct: 20 GPEALEEKTVTHQ-APYP-KNTWY-VACTPDELEDKPLGRTICNEPIVFFRGDEGRVAAV 76
Query: 121 QDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVK 180
+D CPHR A LS G + DG+L C YHG + GKC +P ++ +R Y V+
Sbjct: 77 EDFCPHRGAPLSLGFVRDGKLVCGYHGLEMGCNGKCSSMP----GQRVRGFPSIRAYPVE 132
Query: 181 ESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPI 240
E G VW+W +P +P P + ++ + D+ ++++NLMD H
Sbjct: 133 ERHGFVWIWPGDPDKADPALIPELHWANDPAWAYGGGLYHIHCDYRLMIDNLMDLTHETY 192
Query: 241 SHDRTDWTAKREDAQP 256
H + + E+A P
Sbjct: 193 VHASSIGQPEIEEAAP 208
>gi|194295400|gb|ACF40773.1| dioxygenase [Dolichospermum circinale AWQC323A]
Length = 270
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 20/197 (10%)
Query: 106 QIVLYK--DGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLP 163
++VL++ + N ++ +QD CPHR LS G++++ L C YHGW++ GKCV+IP P
Sbjct: 3 KLVLWRSHEQNSPIQVWQDHCPHRGVALSMGEIVNNTLVCAYHGWRYNEAGKCVQIPAHP 62
Query: 164 ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP-DKLPWFENFARPGFQDVSTIHELP 222
D P SA +TY +E G+VWV + NP + +P F + P + T L
Sbjct: 63 -DMIPPASAIAKTYHCQERYGLVWVCLG-----NPVNDIPEFPEWDDPNYHKTYTKSYLI 116
Query: 223 YDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKE----- 276
+ +++N +D +H P HD W R + FEV D G++ +
Sbjct: 117 QASAFRVMDNSLDVSHFPFIHD--GWLGDRNYTKVENFEVKLDKDGLTMGKYQFQTSRIV 174
Query: 277 ---KDEPLPNFLRFEAP 290
+D+ N+LR P
Sbjct: 175 SDIEDDSWVNWLRLSHP 191
>gi|339018559|ref|ZP_08644691.1| vanillate O-demethylase oxygenase subunit [Acetobacter tropicalis
NBRC 101654]
gi|338752313|dbj|GAA07995.1| vanillate O-demethylase oxygenase subunit [Acetobacter tropicalis
NBRC 101654]
Length = 366
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 104/231 (45%), Gaps = 38/231 (16%)
Query: 78 DW---TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
DW WYP+ L +++ +D PLG+T+ D +VLY+ G E+ D CPHR LS G
Sbjct: 40 DWLILASYWYPVALVREL-EDKPLGVTLLDAPLVLYRSGE-EIVVADDLCPHRGVPLSMG 97
Query: 135 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWM---- 190
+ + C YHG++F G+CVK+P P D IP+ +RTY V E G++W +
Sbjct: 98 RGDGQSIACAYHGFRFGSAGRCVKVPAHP-DNAIPKRLTLRTYPVMERYGLIWTCLRPQE 156
Query: 191 ---SQKTPPNPDKL-------PWFE--NFARPGFQDVSTIHELPYDHSILL---ENLMDP 235
S + P+ D L PW + FA + + + H+ EN + P
Sbjct: 157 GEASLPSMPHWDDLEFQQINCPWIDINGFAGRQVEGFIDVAHFAFVHTATFADPENPVVP 216
Query: 236 AHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLR 286
A++P P GFE R+ G EK P +LR
Sbjct: 217 AYMP-------------KITPYGFEAEYRSSVGNYPIGHSEKGRPGFEWLR 254
>gi|299532713|ref|ZP_07046101.1| vanillate monooxygenase [Comamonas testosteroni S44]
gi|298719348|gb|EFI60317.1| vanillate monooxygenase [Comamonas testosteroni S44]
Length = 359
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 6/201 (2%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++WY ++ D P+ T+ Q +VL++ +G + +DRC HR LS G +
Sbjct: 18 DQWYVAGFAWEL-KDQPVARTLLGQPVVLFRTEDGRVAALEDRCCHRELPLSCGTVEAAG 76
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD- 199
L C YHG F EG+C++I P +IP ACV+++E++E ++W+WM PD
Sbjct: 77 LRCGYHGLLFSHEGRCLEI---PGQERIPAKACVKSFELRERDQILWIWMGATPDSVPDT 133
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
+ P + + P ++ ++ + ++ +NL+D +H+ H +T R
Sbjct: 134 EPPAYAVHSDPKYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVHLKTIGGNARVHMN-ADL 192
Query: 260 EVTERTDRGFAGRWGKEKDEP 280
+V++ D RW + D P
Sbjct: 193 KVSQDGDSVKVVRWMPDSDPP 213
>gi|289767753|ref|ZP_06527131.1| oxidoreductase alpha subunit [Streptomyces lividans TK24]
gi|289697952|gb|EFD65381.1| oxidoreductase alpha subunit [Streptomyces lividans TK24]
Length = 356
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 145/339 (42%), Gaps = 50/339 (14%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGNGELRCYQDRCPHRLAKLSEG--QLID 138
+WY + +V + LG TV + +VLY+ + +G DRC HR LSE +L
Sbjct: 8 QWYVAAYSHEVGREL-LGRTVLGEPLVLYRAEEDGGPVVLHDRCVHRRYPLSEAPTRLDG 66
Query: 139 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
R+ C YHG+ ++ G CV +P ++PR+A V +Y V E +VWVW+ +P
Sbjct: 67 DRIVCGYHGFTYDTTGTCVYVP---GQKRVPRTARVASYPVAERDSLVWVWIGDPALADP 123
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
+ +P + PG+ V + + D+ +L++NL+D +H H T + + P+
Sbjct: 124 EAVPRARHLDAPGWVTVRGMEPIDADYGLLVDNLLDLSHETYLHGGHIGTPEVAET-PIT 182
Query: 259 FEVTE-----RTDR---------------GFAGRWGKEKDEPLPNFLRFEAPCVLQNNRE 298
EV E R R G GR + +D + + APC+ +
Sbjct: 183 TEVDEGAGIVRVSRHMDDAECPPFYARSTGIVGRIDRWQD------IEYHAPCLYVLHSR 236
Query: 299 LV--------DSKTGEKHYFTGLFLCRPTGQGKSM---LIVRFGATKRSPLAKLFPKWYF 347
+ D E + + P+G GK + R AT + + + +
Sbjct: 237 VAPTGTLPAPDGGDPEGFHTEITYAITPSGDGKVYDFWAVSRDWATDDAEVTE-----FL 291
Query: 348 HQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSS 386
+++ V QD+ L+ L E +EL +N+ +
Sbjct: 292 YKSNRTVVMQDVDALNLLQRTLGGERAGYQELSINIDTG 330
>gi|21224976|ref|NP_630755.1| oxidoreductase subunit alpha [Streptomyces coelicolor A3(2)]
gi|3334811|emb|CAA19959.1| oxidoreductase alpha subunit [Streptomyces coelicolor A3(2)]
Length = 359
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 145/339 (42%), Gaps = 50/339 (14%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGNGELRCYQDRCPHRLAKLSEG--QLID 138
+WY + +V + LG TV + +VLY+ + +G DRC HR LSE +L
Sbjct: 11 QWYVAAYSHEVGREL-LGRTVLGEPLVLYRAEEDGGPVVLHDRCVHRRYPLSEAPTRLDG 69
Query: 139 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNP 198
R+ C YHG+ ++ G CV +P ++PR+A V +Y V E +VWVW+ +P
Sbjct: 70 DRIVCGYHGFTYDTTGTCVYVP---GQKRVPRTARVASYPVAERDSLVWVWIGDPALADP 126
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLG 258
+ +P + PG+ V + + D+ +L++NL+D +H H T + + P+
Sbjct: 127 EAVPRARHLDAPGWVTVRGMEPIDADYGLLVDNLLDLSHETYLHGGHIGTPEVAET-PIT 185
Query: 259 FEVTE-----RTDR---------------GFAGRWGKEKDEPLPNFLRFEAPCVLQNNRE 298
EV E R R G GR + +D + + APC+ +
Sbjct: 186 TEVDEGAGIVRVSRHMDDAECPPFYARSTGIVGRIDRWQD------IEYHAPCLYVLHSR 239
Query: 299 LV--------DSKTGEKHYFTGLFLCRPTGQGKSM---LIVRFGATKRSPLAKLFPKWYF 347
+ D E + + P+G GK + R AT + + + +
Sbjct: 240 VAPTGTVPAPDGGDPEGFHTEITYAITPSGDGKVYDFWAVSRDWATDDAEVTE-----FL 294
Query: 348 HQNASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSS 386
+++ V QD+ L+ L E +EL +N+ +
Sbjct: 295 YKSNRTVVMQDVDALNLLQRTLGGERAGYQELSINIDTG 333
>gi|255572292|ref|XP_002527085.1| pheophorbide A oxygenase, putative [Ricinus communis]
gi|223533590|gb|EEF35329.1| pheophorbide A oxygenase, putative [Ricinus communis]
Length = 248
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 77/164 (46%), Gaps = 32/164 (19%)
Query: 91 DVPDDAPLGLTVFDQQIVLYKDGNGE-LRCYQDRCPHRLAKLSEGQLID-GRLECLYHGW 148
D+ P V +V++ D NG + + D CPHRLA LSEG++ GRL+C+YHGW
Sbjct: 5 DLNKKVPHAKRVIGINVVVWWDRNGNSWKVFDDICPHRLAPLSEGRIDQWGRLQCVYHGW 64
Query: 149 QFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW----------MSQKTPPNP 198
F G C IPQ P DA G+VW W +S+K P
Sbjct: 65 CFSGSDDCKFIPQAPKDA--------------PQNGIVWFWPNSDPQFKDILSKKKP--- 107
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
P+ P + + +L + IL ENL+DPAH+P +H
Sbjct: 108 ---PYIPELDDPSYSKIMGNRDLSFGFEILTENLLDPAHVPYAH 148
>gi|2271506|gb|AAC27113.1| unknown [Acinetobacter sp. ADP1]
Length = 316
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 94/193 (48%), Gaps = 5/193 (2%)
Query: 73 QVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLS 132
Q D ++WYP+ + +V + P+G+T + IV+++D G+L +DRCPHR A+LS
Sbjct: 16 QYLDLGLRDQWYPVLASWEVSAN-PVGITRLGENIVVWRDEAGQLYALEDRCPHRGARLS 74
Query: 133 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIP--RSACVRTYEVKESQGVVWVWM 190
G + R+ C YHG G+ V + +PA + P +ACV++Y + E +++W
Sbjct: 75 LGWNLGDRVACWYHG--VRSGGRMVLVADVPAVHECPLKGAACVKSYPIIEKHDAIFIWF 132
Query: 191 SQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAK 250
P +L + E A + + +H ++N+MDP H H + A+
Sbjct: 133 GIDANEPPAELVFPEQLASEAWSSCLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAE 192
Query: 251 REDAQPLGFEVTE 263
E + TE
Sbjct: 193 GERTAEMKHRSTE 205
>gi|374369367|ref|ZP_09627399.1| LysR family transcriptional regulator [Cupriavidus basilensis OR16]
gi|373099109|gb|EHP40198.1| LysR family transcriptional regulator [Cupriavidus basilensis OR16]
Length = 345
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 126/312 (40%), Gaps = 30/312 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY K++P + T+ +V+Y+ +G + +DRC HR A LS G+ +
Sbjct: 7 WYVAGWDKEIPAEGMFSRTIIGVPVVMYRKEHGGIVALEDRCCHRGAPLSVGRREGDCIR 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C+YHG +F+ GKC+ + PA +I A VR + E VW+WM +P +P
Sbjct: 67 CMYHGLKFDSAGKCI---EAPAQERIAPQAKVRKFPTVEQHRWVWIWMGDPDKADPSLIP 123
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
+ P ++ + ++ ++ +NL+D +H+P H T ED + +V
Sbjct: 124 DTQWLDHPEWRSLDGYIHYDVNYLLICDNLLDFSHLPFVHPTT--LGGSEDYAAVRPKV- 180
Query: 263 ERTDRGF-AGRWGKEKDEP--------LP------NFLRFEAPCVLQNNRELVDSKTG-- 305
ER D G RW + P P N F P +L + + + TG
Sbjct: 181 ERIDGGVRITRWAINTEAPAFAKAVKAYPGKVDRWNIYNFTIPAILLMDSGMSPTGTGAP 240
Query: 306 -----EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMG 360
+ F G P + + F + + HQ+ F++D
Sbjct: 241 AGVRVDAAEFRGCQAITPETENSTHYF--FAHPHNFAIDRPEVTASIHQSVVTAFDEDRE 298
Query: 361 FLSSQNEVLMKE 372
+S+Q L E
Sbjct: 299 IISAQQRSLALE 310
>gi|428221280|ref|YP_007105450.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
gi|427994620|gb|AFY73315.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
Length = 370
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYPL +K++ PL +T + I+L + G+L +DRC HR L G + R++
Sbjct: 43 WYPLARSKNLRIGKPLAVTFAGEPIMLVRPEKGDLFALEDRCAHRQIPLHLGVVRGERVQ 102
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YH W ++ +G CV IP L +P V +Y V+E+ G+++V+ + P
Sbjct: 103 CHYHCWTYDRQGSCVNIPYLDGQKHLPNG--VHSYPVREAYGLIFVYTGDLNASGFSQFP 160
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 237
+ FA P ++ + +S + ENLMD H
Sbjct: 161 EVQTFANPKYKTRILDRSISCHYSFMHENLMDMNH 195
>gi|290956056|ref|YP_003487238.1| oxidoreductase subunit alpha [Streptomyces scabiei 87.22]
gi|260645582|emb|CBG68673.1| oxidoreductase alpha subunit [Streptomyces scabiei 87.22]
Length = 351
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/337 (24%), Positives = 140/337 (41%), Gaps = 48/337 (14%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
+WY ++V + LG T+ + +V Y+ + G DRC HR LS+ L R
Sbjct: 8 QWYVAAYAEEVGREL-LGRTILGEPLVFYRTEEEGTPVALHDRCVHRRYPLSKSGLDGDR 66
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG+ ++ G CV +P +IPR+A V +Y V E ++WVW+ +P
Sbjct: 67 IVCGYHGFTYDTTGACVYVP---GQKRIPRTARVASYPVVEQDSLIWVWIGDPALADPQT 123
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
+P + A PG+ V + + D+ +L++NL+D +H H T + + P+ E
Sbjct: 124 IPRARHLAAPGWTTVRGMEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAET-PITTE 182
Query: 261 VTE-----RTDR---------------GFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL- 299
V E R R G GR + +D + + APC+ + +
Sbjct: 183 VDEGAGVVRVSRHMDDAECPPFYARSTGIEGRITRWQD------IEYFAPCLYLLHSRIA 236
Query: 300 -------VDSKTGEKHYFTGLFLCRPTGQGKSM---LIVRFGATKRSPLAKLFPKWYFHQ 349
D + + P+ GK ++ R AT+ + + +
Sbjct: 237 PVGVLPEADGSDPNGFHTEITYAITPSSDGKVYDFWMVSRDWATESDEVTE-----FLRG 291
Query: 350 NASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSS 386
N V QD+ L+ E L E +EL +N+ +
Sbjct: 292 NNHTVVMQDVVALNLLQETLGSERTGYQELSINIDTG 328
>gi|148554469|ref|YP_001262051.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148499659|gb|ABQ67913.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 353
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 97 PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 156
PLG + D +VLY+ GE+ +DRCPHR A LS G+L +EC YHG+QF +G+C
Sbjct: 35 PLGRWLLDTPVVLYRTQGGEVVALEDRCPHRQAPLSIGKLQGDAIECGYHGFQFGRDGRC 94
Query: 157 VKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK----TPPNPDKLPWFENFARPGF 212
V++P + + P + T+ V+E +VWV++ P P + W + P F
Sbjct: 95 VRVPTMAS----PPPISIETFPVREIGPLVWVYLGDSACLDAVPPPPTMAWMSD---PSF 147
Query: 213 QDVSTIHELPYDHSILLENLMDPAHIPISH 242
E+ ++ +L EN++D H H
Sbjct: 148 AIRQGKTEIAANYLLLKENVLDLTHFGYVH 177
>gi|299530152|ref|ZP_07043578.1| Rieske iron-sulfur protein [Comamonas testosteroni S44]
gi|298721809|gb|EFI62740.1| Rieske iron-sulfur protein [Comamonas testosteroni S44]
Length = 354
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 9/167 (5%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WY + ++ D P+G + + +VL++ G+G + +DRC HR LS G + L
Sbjct: 24 QWYVAAHSSELAD-KPVGRKLLGEAVVLFRIGDGTVAALEDRCCHRALPLSAGTVESCGL 82
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHG + EGKCV+I P KIP A V Y V+E G++W+W + P NP+ +
Sbjct: 83 RCGYHGLLYNHEGKCVEI---PGQEKIPTKAKVSAYHVQERDGLIWIWFGK--PENPEPM 137
Query: 202 ---PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
P + + P + ++ + ++ +NL+D +H+ H T
Sbjct: 138 CDAPSYSVHSSPEYVYGGDVYHYNAPYQLIHDNLLDLSHLGYVHLHT 184
>gi|239814712|ref|YP_002943622.1| Rieske (2Fe-2S) domain-containing protein [Variovorax paradoxus
S110]
gi|239801289|gb|ACS18356.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 225
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 77/137 (56%), Gaps = 6/137 (4%)
Query: 78 DWTEEWYPLYLTKDV-PDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQL 136
D W+P+ + ++ P + Q++ L++ +G + +++RCPHR + + GQ+
Sbjct: 4 DSIPTWHPVARSAELRPGANIVAGFAEGQELALWRAASGAAQAWENRCPHRSVRFTLGQV 63
Query: 137 IDGRLECLYHGWQFE-GEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTP 195
+ RL C YHGWQ++ G G+C IP P PR+ C + + E+ G++WV ++ +TP
Sbjct: 64 LQDRLACAYHGWQYDAGNGQCASIPAHP-GMPAPRNVCAKVFHAAEAAGMLWVSLAAETP 122
Query: 196 PNP---DKLPWFENFAR 209
P+P D +P +F R
Sbjct: 123 PSPPPGDAVPAGWSFCR 139
>gi|423529620|ref|ZP_17506065.1| hypothetical protein IGE_03172 [Bacillus cereus HuB1-1]
gi|402448102|gb|EJV79950.1| hypothetical protein IGE_03172 [Bacillus cereus HuB1-1]
Length = 303
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 9/147 (6%)
Query: 102 VFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQ 161
V + VLY+D GE++ CPHR A LS GQ+++G+L C YHGW+F+ G CV+IP
Sbjct: 19 VAGKDFVLYRDEKGEVQALSPYCPHRGADLSLGQVVNGKLVCPYHGWEFDSCGTCVRIPS 78
Query: 162 LPADAKIPRSACVRTYEVKESQGVVWVW-MSQKTPPNPDKLPWFEN--FARPGFQDVSTI 218
P + IP+ A +Y V+E G++W++ S++TPP EN F F
Sbjct: 79 QP-NKPIPKFAHTFSYPVREKIGLIWIYPDSEETPPEWQTFHVMENTPFKLSFFHATWNA 137
Query: 219 HELPYDHSILLENLMDPAHIPISHDRT 245
H + +E+++D AH+ H +T
Sbjct: 138 HL-----TRSIESVLDTAHLAYIHKKT 159
>gi|427418552|ref|ZP_18908735.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 7375]
gi|425761265|gb|EKV02118.1| ring-hydroxylating dioxygenase, large terminal subunit
[Leptolyngbya sp. PCC 7375]
Length = 346
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 122/300 (40%), Gaps = 23/300 (7%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + L+ + L TV D+ +V+++ NG+ +DRC HR +LS G++ G+L+
Sbjct: 15 WYVVALSTQLKPKTVLQRTVLDEWLVIFRGENGQPVALRDRCLHRNTRLSGGKVHKGQLQ 74
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQ+ G+ +P + C + Y+ E G V+V + P +P
Sbjct: 75 CPYHGWQYASTGQVTNVPAEGEQFATTSNRCAKAYDTCEQDGYVYVRLRGGLETQPFAMP 134
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH---------DRTDWTAKRED 253
+F PG++ V I+ + + EN +D H H + T KR
Sbjct: 135 ---HFQAPGWETVRVINRFANNVTNCAENFIDIPHTVSVHPGIFRTARQQQLAMTVKRHQ 191
Query: 254 AQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG--EKHYFT 311
E + G++ + + + + F P V V+ G + + T
Sbjct: 192 GSVTATYRNETNNLGWSRWFLNPQGHEIYHRDSFHMPNVTS-----VEYTMGPHRRCFIT 246
Query: 312 GLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMK 371
+ V F + LAK F +W A ++ +QD+G L Q + + K
Sbjct: 247 SHSIPETENSTLVYTDVTFNYGIWNKLAKPFVRW----TAQRIIDQDIGALGVQGDAIAK 302
>gi|115359078|ref|YP_776216.1| vanillate monooxygenase [Burkholderia ambifaria AMMD]
gi|115284366|gb|ABI89882.1| Vanillate monooxygenase [Burkholderia ambifaria AMMD]
Length = 366
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 91/173 (52%), Gaps = 4/173 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +V D T+ ++ ++L+++ GE++ +RCPHR A L G+ + ++
Sbjct: 16 WYVAAWDSEVKADELFQRTLLNESVLLFRNDRGEVQAVSNRCPHRFAPLHLGKKLPNGVQ 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F+G G+C + P +P++A ++TY V E ++W+WM + + + K+P
Sbjct: 76 CPYHGLEFDGSGQCTRNPH--GGGVVPKAAQLKTYPVVEKYSLIWIWMGEASIADSSKIP 133
Query: 203 WFENFARPGFQDVSTIH-ELPYDHSILLENLMDPAHIPISHDRTDWTAKREDA 254
F P V+ + + ++ + +N++D +HI H T ++ DA
Sbjct: 134 DFSCL-DPQLSHVAKRYLHVKANYVLETDNILDLSHIQYLHPGTLGSSSVADA 185
>gi|183598765|ref|ZP_02960258.1| hypothetical protein PROSTU_02191 [Providencia stuartii ATCC 25827]
gi|386745116|ref|YP_006218295.1| Rieske (2Fe-2S) domain-containing protein [Providencia stuartii
MRSN 2154]
gi|188020967|gb|EDU59007.1| rieske [2Fe-2S] domain protein [Providencia stuartii ATCC 25827]
gi|384481809|gb|AFH95604.1| Rieske (2Fe-2S) domain-containing protein [Providencia stuartii
MRSN 2154]
Length = 345
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 104/196 (53%), Gaps = 15/196 (7%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WYP+ + +V + P+G+T ++QIVL++D G++ +DRCPHR A+LS G + R+
Sbjct: 21 QWYPVLSSWEVTSN-PIGITRLEEQIVLWRDQQGQIHALEDRCPHRGARLSMGWNLGERI 79
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW--MSQKTPPN-- 197
C YHG + G+G +P + + + C++TY V+E G ++++ ++ + PP
Sbjct: 80 ACWYHGVEVGGDGIVKDVPAV-SQCPLEGQKCLKTYPVQEYHGAIFLYFAITDEEPPTLA 138
Query: 198 -PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
P++L EN + F +T H ++ LEN+MDP H H + A +
Sbjct: 139 FPEELADSENHSH--FLCTATWH---CNYQYALENVMDPMHGTYLHSSSHSMADGDKQSE 193
Query: 257 LGFEVTERTDRGFAGR 272
+ + E T GF R
Sbjct: 194 M---ILEPTQNGFIFR 206
>gi|347760651|ref|YP_004868212.1| vanillate O-demethylase oxygenase [Gluconacetobacter xylinus NBRC
3288]
gi|347579621|dbj|BAK83842.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
xylinus NBRC 3288]
Length = 228
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDG--NGELRCYQDRCPHRLAKLSEGQLID 138
E W+P+ + D+ +G+ V +IVL+++ + ++DRCPHR +LS G + D
Sbjct: 9 ERWHPVSVLSDIGRGEVVGVRVEGHEIVLWREDVPGATVHAWEDRCPHRGMRLSFGFVRD 68
Query: 139 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 188
G L CLYHGWQF G +C IP P + ++P + VR Y V+E G+ WV
Sbjct: 69 GALGCLYHGWQFGGTARCRLIPAHP-NVRVPAAIQVRAYAVREQAGLAWV 117
>gi|398849602|ref|ZP_10606336.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
gi|398250670|gb|EJN35978.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM80]
Length = 357
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 9/168 (5%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++WY L++++ D PLG T+ ++ +VL++ + ++ +DRC HR LS G + +
Sbjct: 23 DQWYVAALSREL-KDQPLGRTLLNKPVVLFRTADNQVAALEDRCCHRALPLSGGTVEERG 81
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
L C YHG F GKC++I P KIP A V Y V+E ++W+W P P
Sbjct: 82 LRCGYHGLLFNEGGKCIEI---PGQDKIPSKAKVPAYPVREQDQIIWIWFGSAEHPEPTF 138
Query: 201 LPWFENFARPG---FQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
P + G F ++ PY ++ +NLMD +H+ H T
Sbjct: 139 APPVYDVHSSGKYLFDGDVYHYDAPY--QLIHDNLMDLSHLGYVHLHT 184
>gi|398824385|ref|ZP_10582719.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. YR681]
gi|398224947|gb|EJN11235.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. YR681]
Length = 349
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 134/325 (41%), Gaps = 31/325 (9%)
Query: 96 APLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGK 155
A L T+ + +V+Y+ +G + +D C HRL LS+G+L + C YHG ++ +G+
Sbjct: 22 ALLPRTICGKHVVMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKYNAQGR 81
Query: 156 CVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDV 215
C +P+ I SACVR Y V E +W+WM +P +P P +
Sbjct: 82 CTF---MPSQETINPSACVRAYPVVERHRYIWLWMGDPALADPALVPDMHWNHDPAWAGD 138
Query: 216 STIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTE--------RTDR 267
+ D+ ++L+NLMD H H + +A F+VT R R
Sbjct: 139 GKTIRVNCDYRLVLDNLMDLTHETFVHGSSIGNDAVAEAP---FDVTHGEKTVTVTRWMR 195
Query: 268 GFAGR--WGKEKDEP----LPNFLRFEAPCVLQNNRELVDSKTG-----EKHYFTGLFLC 316
G W K+ +P +RFEAPC + + + + TG G L
Sbjct: 196 GIEAPPFWAKQLGKPGLVDRWQIIRFEAPCTIAIDVGVAPTGTGAPEGDRSQGVNGFVLN 255
Query: 317 RPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPT 376
T + + + + + + + S +F +D L +Q + + P
Sbjct: 256 TITPETEKTCHYFWAFVRNYQIGEQRITTEIREGVSGIFHEDELILEAQQRAM--DENPD 313
Query: 377 KELY-LNLRSSDTWVAEYRKWMDKV 400
+ Y LN+ + W RK +D++
Sbjct: 314 RIFYNLNIDAGAMWT---RKLIDRM 335
>gi|228969704|ref|ZP_04130484.1| hypothetical protein bthur0004_63620 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|423563125|ref|ZP_17539401.1| hypothetical protein II5_02529 [Bacillus cereus MSX-A1]
gi|228789998|gb|EEM37800.1| hypothetical protein bthur0004_63620 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|401199353|gb|EJR06256.1| hypothetical protein II5_02529 [Bacillus cereus MSX-A1]
Length = 303
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 9/147 (6%)
Query: 102 VFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQ 161
V + VLY+D GE++ CPHR A LS GQ+++G+L C YHGW+F+ G CV+IP
Sbjct: 19 VTGKDFVLYRDEKGEVQALSPYCPHRGADLSLGQVVNGKLVCPYHGWEFDSCGTCVRIPS 78
Query: 162 LPADAKIPRSACVRTYEVKESQGVVWVW-MSQKTPPNPDKLPWFEN--FARPGFQDVSTI 218
P + IP+ A +Y V+E G++W++ S++TPP EN F F
Sbjct: 79 QP-NKPIPKFAHTFSYPVREKIGLIWIYPDSEETPPEWQTFHVMENTPFKLSFFHATWNA 137
Query: 219 HELPYDHSILLENLMDPAHIPISHDRT 245
H + +E+++D AH+ H +T
Sbjct: 138 HL-----TRSIESVLDTAHLAYIHKKT 159
>gi|410665771|ref|YP_006918142.1| Rieske (2Fe-2S) domain-containing protein [Simiduia agarivorans SA1
= DSM 21679]
gi|409028128|gb|AFV00413.1| Rieske (2Fe-2S) domain-containing protein [Simiduia agarivorans SA1
= DSM 21679]
Length = 341
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 78 DWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI 137
D ++ W+P+ + +++ D P+ + +V+++ + D CPHR+A LS+GQ
Sbjct: 6 DGSQCWWPVAVARELSADRPMRRQLNGLPLVIFRTNELKPAALVDACPHRMAPLSQGQCT 65
Query: 138 DGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN 197
G+++C YHGW F+G+G+CV+IP + + R VR ES G++WV P N
Sbjct: 66 QGQIQCPYHGWTFDGQGRCVRIPGMQDAHALSRRPLVRALGCVESAGLIWVQTEAGAPLN 125
Query: 198 -PDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHD---RTDWTAKRED 253
PD+ + F D + + + EN ++ H H R D ++ D
Sbjct: 126 LPDESNGVDQFFMQSTVDATLLD--------IAENFLEAFHTHFVHRGLVRRDTQRQQVD 177
Query: 254 A--QPL--GFEV---TERTDRGFAGR 272
A +P+ G EV E+T G+ R
Sbjct: 178 ALLRPIDGGIEVAYQNEQTQNGWLSR 203
>gi|440696445|ref|ZP_20878913.1| Rieske [2Fe-2S] domain protein [Streptomyces turgidiscabies Car8]
gi|440281329|gb|ELP68959.1| Rieske [2Fe-2S] domain protein [Streptomyces turgidiscabies Car8]
Length = 354
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 138/337 (40%), Gaps = 48/337 (14%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYK-DGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
+WY + +V + LG T+ + +V Y+ + G DRC HR LSE L R
Sbjct: 11 QWYVAAYSHEVGREL-LGRTILGEPLVFYRTEDEGTPVALADRCVHRRYPLSESGLDGDR 69
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG+ ++ G CV +P +IPR+A V +Y+V E ++WVW+ + D
Sbjct: 70 IVCGYHGFTYDTTGACVYVP---GQKRIPRTARVASYQVVEQDALIWVWIGDPALADADT 126
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
+P + PG+ V + + D+ +L++NL+D +H H T + + P+ E
Sbjct: 127 IPRARHLDSPGWVTVKGMEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAET-PINTE 185
Query: 261 VTE-----RTDR---------------GFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL- 299
V E R R G GR + +D + + APC+ + +
Sbjct: 186 VDEGAGIVRVSRHMDDAECPPFYARSTGIEGRITRWQD------IEYHAPCLYLLHSRIA 239
Query: 300 -------VDSKTGEKHYFTGLFLCRPTGQGKSM---LIVRFGATKRSPLAKLFPKWYFHQ 349
D + + P+ GK ++ R AT + + +
Sbjct: 240 PVGVLPEADGSDPNGFHTEITYAITPSADGKVYDFWMVSRDWATDDDEVTE-----FLRG 294
Query: 350 NASKVFEQDMGFLSSQNEVLMKETVPTKELYLNLRSS 386
N V QD+ L+ L E +EL +N+ +
Sbjct: 295 NNHTVVMQDVDALNLLQRTLGSERSGYQELSINIDTG 331
>gi|405355684|ref|ZP_11024859.1| iron-sulfur cluster-binding protein, Rieske family [Chondromyces
apiculatus DSM 436]
gi|397091391|gb|EJJ22209.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 366
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 125/308 (40%), Gaps = 35/308 (11%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+ L + ++ D PL T+ +VL++ G+ DRCPHR LS G++ +G+L+
Sbjct: 29 WFILCASSEL-GDKPLARTLQGSPLVLFRGEGGKPATLVDRCPHRNVPLSLGRVKEGQLQ 87
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 200
C YHGW+F+G G+C IP + R+ C + +E G VWV+ + P P +
Sbjct: 88 CGYHGWRFDGAGQCRAIPGFLGEPGA-RARCATAHATREQDGFVWVYSTPGVEPTTEPYR 146
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH----------DRTDWTAK 250
P E AR + V + P LEN +D H H + + +
Sbjct: 147 FPLLE--ARE-YSTVRRMLRAPGSLHATLENTLDVPHTAYLHGGLFRTEEKRNEIEVVVR 203
Query: 251 REDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYF 310
R + + E G G+ + +F RF P + Q V+ + G+ +
Sbjct: 204 RSADKVEAEYIGEPRPSGLVGKLLAPGGGVVQHFDRFLMPSIAQ-----VEYRIGDTSHI 258
Query: 311 TGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQN-------ASKVFEQDMGFLS 363
P + +++ T R PL P+W A +F QD L
Sbjct: 259 MVTSAMTPVSEWDTLVFAV--VTFRLPL----PRWLVRAALPLIMPVALHIFGQDARILK 312
Query: 364 SQNEVLMK 371
Q E + +
Sbjct: 313 KQTETIRR 320
>gi|254422717|ref|ZP_05036435.1| Rieske (2Fe-2S) domain protein [Synechococcus sp. PCC 7335]
gi|196190206|gb|EDX85170.1| Rieske (2Fe-2S) domain protein [Synechococcus sp. PCC 7335]
Length = 363
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 89/174 (51%), Gaps = 23/174 (13%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYK---DGNGELRCYQDRCPHRLAKLSEGQLIDG 139
WYP+ +KDV + P+G T+ DQ++V+++ +L D C HR LS G + +
Sbjct: 42 WYPIAFSKDVTTE-PVGTTLLDQRLVIWRPPASSGSQLCVANDICIHRGVPLSMGHIENE 100
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMS--QKTPPN 197
+L C YHG+ + G+C KIP P +AKIP C++TY VKE+ G+VW +S + TP
Sbjct: 101 QLICKYHGFHYSASGQCTKIPANP-EAKIPARLCLKTYPVKEAYGLVWTTLSGDENTP-- 157
Query: 198 PDKLPWFENFARPGFQDVSTIHELPYDHSI------LLENLMDPAHIPISHDRT 245
LP F + +Q + LP + +E +D AH H +
Sbjct: 158 ---LPAFPEWENDDYQPI-----LPNSVDVSAAAGRQMEGFLDVAHFAWVHSES 203
>gi|108757788|ref|YP_629242.1| Rieske family iron-sulfur cluster-binding protein [Myxococcus
xanthus DK 1622]
gi|108461668|gb|ABF86853.1| iron-sulfur cluster-binding protein, Rieske family [Myxococcus
xanthus DK 1622]
Length = 363
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 125/310 (40%), Gaps = 39/310 (12%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+ L + ++ D PL T+ +VL++ G+ DRCPHR LS G++ +G+L+
Sbjct: 26 WFILCASSEL-GDKPLARTLQGSPLVLFRGEGGKPAALVDRCPHRNVPLSLGRVKEGQLQ 84
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 200
C YHGW+F+G G+C IP + R+ C + +E G VWV+ + P P +
Sbjct: 85 CGYHGWRFDGAGQCRAIPGFLGEPGA-RARCATAHATREQDGFVWVYSTPGVEPTTEPYR 143
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH----------DRTDWTAK 250
P E AR + V P LEN +D H H + D +
Sbjct: 144 FPLLE--ARE-YTTVRRTLRAPGSLHSTLENTLDVPHTAYLHGGLFRTEEKRNEIDVVVR 200
Query: 251 REDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYF 310
R + + E G GR + +F RF P + Q V+ + G+ +
Sbjct: 201 RSADKVEAEYIGEPRPSGLVGRLLAPGGGVVQHFDRFLMPSIAQ-----VEYRIGDTSHI 255
Query: 311 TGLFLCRPTGQGKSML--IVRFGATKRSPLAKLFPKWYFHQN-------ASKVFEQDMGF 361
P +++ +V F R PL P+W A +F QD
Sbjct: 256 MVTSAMTPVSDWDTLVYAVVTF----RLPL----PRWLVRAALPLLMPVALHIFGQDARI 307
Query: 362 LSSQNEVLMK 371
L Q E + +
Sbjct: 308 LRQQTETIRR 317
>gi|403527463|ref|YP_006662350.1| vanillate O-demethylase oxygenase component [Arthrobacter sp.
Rue61a]
gi|403229890|gb|AFR29312.1| vanillate O-demethylase oxygenase component [Arthrobacter sp.
Rue61a]
Length = 367
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR-- 140
W+ ++ L T+ + + LY+ G+G D C HRLA LS+G+L+ GR
Sbjct: 22 WFVAGWDHEISAKGILARTIAGRPLALYRTGDGRAVALADACWHRLAPLSQGKLV-GRDE 80
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
++C YHG ++ G+C +PA + SA V ++ V E VWVW+ T +P
Sbjct: 81 IQCPYHGLRYNAAGRCTS---MPAQETLNPSATVPSFPVVERYRYVWVWLGDPTKADPGL 137
Query: 201 LPWFENFARPGFQ-DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
LP P + D TIH P ++ ++L+NLMD H H + +E+ F
Sbjct: 138 LPDMHQLDSPEWAGDGETIHA-PCNYQLVLDNLMDLTHEEFVHSS---SIGQEELSESEF 193
Query: 260 EVTERTDRGFAGRWGKEKDEP 280
EVT RW + D P
Sbjct: 194 EVTHDETSVTVTRWMRNIDAP 214
>gi|358457313|ref|ZP_09167532.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
gi|357079491|gb|EHI88931.1| Rieske (2Fe-2S) iron-sulfur domain protein [Frankia sp. CN3]
Length = 360
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 156/352 (44%), Gaps = 50/352 (14%)
Query: 78 DWT---EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
DW WYP+ L+++V D P+ + D+++V+Y+ G+ + +D CPHR L+ G
Sbjct: 24 DWAILARHWYPVALSREV-RDQPVAARLLDERLVVYRAGDAVV-VARDICPHRGVPLTLG 81
Query: 135 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWM--SQ 192
+ C YHG +F G+CV IP PA AKIP + TY E G+VW + Q
Sbjct: 82 TGNGETIACAYHGLRFGESGRCVAIPAQPA-AKIPARMTLLTYPAVERYGLVWTCLRPGQ 140
Query: 193 KTPPN---PD----KLPWFENFARPGFQDVST-IHELPYDHSILLENLMDPAHIPISHDR 244
+ P PD +P ++ PGFQ V+ E+ LE +D AH H
Sbjct: 141 ELAPGGSAPDGSAAAIPRMPHWDEPGFQQVTCPAFEVAAFAGRQLEGFLDVAHFAFVHTA 200
Query: 245 TDWTAKREDAQPLGFEVTERTDRGF-AGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSK 303
T A +++ + +T T+ GF A W + P Q + + +
Sbjct: 201 T--FADPNNSEVPDYSLTP-TESGFTADYWSTVGNYPRGG---------PQGDPDFRWLR 248
Query: 304 TGEKHY-FTGLFLCRPTGQGKSMLIVRFGATKRS--------PLAKLF----PKWYFHQN 350
E H FTG + G+G+ L++ A+ S P+AK F P +
Sbjct: 249 HFEAHLPFTGTLVVHFPGEGR--LVIMNAASPVSARQTRMFAPIAKNFNIHQPDQEIYDF 306
Query: 351 ASKVFEQDMGFLSSQNEVLMKETVPTK-ELYLNLRSSDTWVAEYRKWMDKVG 401
++FE+D + +Q E +P + +N+ + + VA YR+ + +G
Sbjct: 307 NLRIFEEDRAIVEAQR----PENLPLDPRIEVNIAADRSSVA-YRRGLRALG 353
>gi|397735423|ref|ZP_10502121.1| rieske domain protein [Rhodococcus sp. JVH1]
gi|396928725|gb|EJI95936.1| rieske domain protein [Rhodococcus sp. JVH1]
Length = 345
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++D+ L T+ + +VLY+ +G DRCPHR A LS G+L D +
Sbjct: 8 WYMAAWSQDLGVGKLLSRTIIEVPVVLYRSNDGVAHALMDRCPHRFAPLSRGELNDRGIA 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F+ +G C++ P KIP+ A V Y V E + W+WM + P+ D +P
Sbjct: 68 CGYHGLEFDHDGVCIRNPH--PSGKIPKRAHVNAYPVVERDTIAWIWMGDRD-PDEDLIP 124
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ + + ++++NL+D +H H
Sbjct: 125 DYSILTKSNGVTRRDYLLMDASFDLIVDNLLDCSHTSFLH 164
>gi|385674800|ref|ZP_10048728.1| oxidoreductase subunit alpha [Amycolatopsis sp. ATCC 39116]
Length = 348
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++WY +V + L T+ + IV Y+ GE+ DRC HR LSE +L R
Sbjct: 7 DQWYVAAYGSEVGREL-LARTILGEPIVFYRTEAGEVVALADRCVHRRYPLSESRLDGDR 65
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG+ +E G CV + P ++IPR+A V +Y V E VWVW+ +
Sbjct: 66 IVCGYHGFTYEPSGSCVFV---PGQSRIPRTARVPSYPVVEQDSFVWVWIGDPARADATL 122
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 237
+P A P + V + L + +L++NLMD +H
Sbjct: 123 IPRAPWLADPAYTTVCGMEPLAARYDLLVDNLMDLSH 159
>gi|340786276|ref|YP_004751741.1| Rieske (2Fe-2S) domain-containing protein [Collimonas fungivorans
Ter331]
gi|340551543|gb|AEK60918.1| Rieske (2Fe-2S) domain protein [Collimonas fungivorans Ter331]
Length = 344
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 4/163 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L+ ++ + P T+ +++IV+Y+ ++ +DRC HR LS G+LI L+
Sbjct: 7 WYAAALSGEIKSE-PFARTILNEKIVMYRTSANQVVALEDRCAHRQVPLSRGRLIGDELQ 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +++ G+CV I P+ + IP+ A VR++ E G VW+W + +P
Sbjct: 66 CWYHGLRYDCSGECVNI---PSQSTIPKGARVRSFPAVEKHGFVWLWPGDPDQADESAIP 122
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
+ P + + ++ ++N++D +H H +T
Sbjct: 123 NHWVCSAPELAGTMSYCTIACNYVFGIDNILDISHAAFVHAKT 165
>gi|264677972|ref|YP_003277879.1| Rieske iron-sulfur protein [Comamonas testosteroni CNB-2]
gi|262208485|gb|ACY32583.1| Rieske iron-sulfur protein [Comamonas testosteroni CNB-2]
Length = 354
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 9/167 (5%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WY + ++ D P+G + + +VL++ G+G + +DRC HR LS G + L
Sbjct: 24 QWYVAAHSSELAD-KPVGRKLLGEAVVLFRIGDGTVAALEDRCCHRALPLSAGTVESCGL 82
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHG + EGKCV+I P KIP A V Y V+E G++W+W + P NP+ +
Sbjct: 83 RCGYHGLLYNHEGKCVEI---PGQEKIPSKAKVLAYHVQERDGLIWIWFGK--PENPEPM 137
Query: 202 ---PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
P + + P + ++ + ++ +NL+D +H+ H T
Sbjct: 138 CDAPSYSVHSSPEYVYGGDVYHYNAPYQLIHDNLLDLSHLGYVHLHT 184
>gi|421807677|ref|ZP_16243537.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC035]
gi|410416658|gb|EKP68430.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC035]
Length = 355
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKSYPVIEQHGAIFIWFGIDANEQPAA 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMKHR 198
Query: 261 VTE 263
TE
Sbjct: 199 TTE 201
>gi|365894174|ref|ZP_09432329.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
gi|365425021|emb|CCE04871.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
Length = 337
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 10/188 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L + D D P T+ + IVL+ D GE +DRC HR AKLS+G +G +
Sbjct: 13 WYAL-MPVDHLKDGPKPFTLLGEPIVLFLDAKGEPAALEDRCCHRTAKLSKGWCNNGNIV 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+++ +GK V IPQ P + +P A R++ G VWV + + +P
Sbjct: 72 CGYHGWEYDRDGKLVMIPQFPFEQPVP-EAKARSFRATARYGYVWVALDEPL----SDIP 126
Query: 203 WFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
PG++ ++ ++ ++ L+EN D AH H T +P +E+
Sbjct: 127 SIPEDDMPGYRRINQFYDKWNTAALRLMENSFDNAHFAFVHKGT--FGDINQPKPEKYEI 184
Query: 262 TERTDRGF 269
E +D GF
Sbjct: 185 VE-SDAGF 191
>gi|419797452|ref|ZP_14322931.1| Rieske [2Fe-2S] domain protein [Neisseria sicca VK64]
gi|385698076|gb|EIG28464.1| Rieske [2Fe-2S] domain protein [Neisseria sicca VK64]
Length = 341
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 125/292 (42%), Gaps = 25/292 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYPL +K + D P+ + QQ+VL + NG+ C D CPHR LS G+++ G+L+
Sbjct: 21 WYPLIPSKQL-KDKPVHRELLGQQLVLVR-LNGQAACMDDCCPHRHVPLSAGKIVSGKLQ 78
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F+ +GK + + + + V T+ +E VWV + P P
Sbjct: 79 CCYHGWEFDAQGKVLTV--VGGMCACEEAESVPTFPCREYDDWVWVCLVSDIPFEP---- 132
Query: 203 WFENFARP-GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ------ 255
+ +F P GF+ + + + D +EN +DP H H + ++ Q
Sbjct: 133 -YADFEAPEGFETANAVRYMEGDFIHAIENFLDPTHTRYIHAKLLRNNGKQSMQISQSHH 191
Query: 256 PLGFEVTERTDRGFAGRWGKEKDEPLP-NFLRFEAPCVLQNNRELVDSKTGEKHYFTGLF 314
GF R ++ G K D+ + N F P +++ +D T H +
Sbjct: 192 ERGFVTHYRLNQQQNGLINKLFDKGITVNDAAFTFPGLVR-----IDYFTPNSHEYRISA 246
Query: 315 LCRPTGQGKSMLIVRFGATK-RSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
P +G L VR K R PL F F ++ QD + SQ
Sbjct: 247 FFIPQNKGSMGLNVRVHFPKSRFPLPIKF--HLFRPFLERLMVQDSAIIKSQ 296
>gi|398993802|ref|ZP_10696737.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
gi|398133710|gb|EJM22895.1| ring-hydroxylating dioxygenase, large terminal subunit [Pseudomonas
sp. GM21]
Length = 358
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 97 PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 156
PL LT+ D ++VL++ +G + +DRCPHR A LS G+++ ++C YHG+ F+ G C
Sbjct: 38 PLALTMLDTKVVLFRKEDGTVAALEDRCPHRWAPLSSGKVVGDAIQCGYHGFTFDATGSC 97
Query: 157 VKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ-----KTPPNPDKLPWFENFARPG 211
V+I P+ +IP VR Y + VWVWM + PP + P A P
Sbjct: 98 VRI---PSQTQIPSRCKVRAYTAVDKPPFVWVWMGDPEKIVEGPPVEAEWP-----ADPN 149
Query: 212 FQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ S ++ +L EN++D H H
Sbjct: 150 YSSWSGETLAHGNYMLLKENVLDLTHFGYVH 180
>gi|262195099|ref|YP_003266308.1| Rieske (2Fe-2S) domain-containing protein [Haliangium ochraceum DSM
14365]
gi|262078446|gb|ACY14415.1| Rieske (2Fe-2S) iron-sulphur domain protein [Haliangium ochraceum
DSM 14365]
Length = 388
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 64 SAEERRGERQVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDR 123
SA E+R +A + + WY + ++ + P +T +++VL++D G + R
Sbjct: 10 SAHEQRSAAPLAGFV-EDCWYAILESRRL-RRRPQSVTRLGRRLVLWRDRRGRVLATDAR 67
Query: 124 CPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQ 183
CPHR A L G++ +G +EC YHG++F+G G C +IP D IP V +Y V E
Sbjct: 68 CPHRGADLGLGRVREGEIECPYHGFRFDGAGACTRIPCEGGDYSIPAGMAVNSYAVTERY 127
Query: 184 GVVWVW-----------MSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENL 232
G++W+W ++ PP +PWF+ + E + E +
Sbjct: 128 GLIWLWWPAGGVCADPVAAESLPP----VPWFDEMPASLSGTTTETMEWQTPFTRAAEGM 183
Query: 233 MDPAHIPISH 242
+D H P +H
Sbjct: 184 LDIHHAPFAH 193
>gi|87199506|ref|YP_496763.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
gi|87135187|gb|ABD25929.1| Rieske (2Fe-2S) protein [Novosphingobium aromaticivorans DSM 12444]
Length = 356
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 4/161 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L+ +V A + D +++Y+ +G +DRCPHR A L G+ +
Sbjct: 16 WYVAALSSEVQGQALFHRKILDISVMIYRLSDGSPTALRDRCPHRFAPLHMGKREGDEIS 75
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YH +F G C P + IP A VR + + E G +W+WM ++T +PD LP
Sbjct: 76 CFYHALRFNSVGTCTHNPH--GNGNIPDGANVRAFPLLERHGFIWIWMGEQT-ADPDLLP 132
Query: 203 WFENFARPGFQDVS-TIHELPYDHSILLENLMDPAHIPISH 242
F G V T + + ++++N+MD +HI H
Sbjct: 133 DFSPLEDSGPNAVGYTYMHMDANFELIVDNVMDLSHIDHVH 173
>gi|424740746|ref|ZP_18169125.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-141]
gi|422945537|gb|EKU40489.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-141]
Length = 355
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 5/189 (2%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKSYPVSEQHGAIFIWFGIDANEQPKP 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
L + E A + + +H ++N+MDP H H + A E +
Sbjct: 139 LEFPEQLASEEWSAFLCQADWKVNHQYAIDNVMDPMHGTYLHATSHSMADGERTAEMKHR 198
Query: 261 VTERTDRGF 269
TD GF
Sbjct: 199 T---TDNGF 204
>gi|296115924|ref|ZP_06834547.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
hansenii ATCC 23769]
gi|295977496|gb|EFG84251.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
hansenii ATCC 23769]
Length = 354
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 105/218 (48%), Gaps = 17/218 (7%)
Query: 62 PASAEERRGERQVADYDWTEE-WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCY 120
PA+ R V D++ WYP+ L +D+ PL +T+ D +V+Y+ G G++
Sbjct: 13 PANILPRNMTFDVDDWNILARCWYPVALVRDL-GAQPLSMTLLDAPLVIYRAGEGDIVIA 71
Query: 121 QDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVK 180
D CPHR LS G+ + C YHG++F +G+CV++P P D+ IP +RTY V
Sbjct: 72 DDLCPHRGVPLSMGKGDGQTVACAYHGFRFGAQGRCVRVPAHP-DSAIPSKLNLRTYPVV 130
Query: 181 ESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIP 239
E G++W + + ++P ++ P +Q ++ ++ +E +D AH
Sbjct: 131 ERYGLIWTCLRPEG--EMPEIPPMPHWDDPSYQQINCPWIDIAGFAGRQVEGFIDVAHFA 188
Query: 240 ISHDRTDWTAKREDA---------QPLGFEVTERTDRG 268
H TD A E+ P GFE R++ G
Sbjct: 189 FVH--TDTFADPENPVVPPYRTRLTPDGFEAEYRSNVG 224
>gi|114769251|ref|ZP_01446877.1| Rieske (2Fe-2S) protein [Rhodobacterales bacterium HTCC2255]
gi|114550168|gb|EAU53049.1| Rieske (2Fe-2S) protein [Rhodobacterales bacterium HTCC2255]
Length = 346
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 133/303 (43%), Gaps = 31/303 (10%)
Query: 100 LTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKI 159
+TV +Q+I ++K +G+ +D CPHR LS+G++ +EC YHG F+ GKCV
Sbjct: 23 ITVLNQKICIFKSQSGDFVALEDACPHRKLPLSKGRIKGDTVECGYHGLTFDCSGKCV-- 80
Query: 160 PQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ-DVSTI 218
P IP +A V +Y + E G++W+WM + + +N+ P + +
Sbjct: 81 -WAPGQGNIPSNAKVHSYPLHEKYGLIWIWMGNSALADHHDIFEIKNYNDPSWGINRGDA 139
Query: 219 HELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRG-FAGRWGKEK 277
EL ++ ++ +NL+DP H+ H + A + A PL ++TD G RW +
Sbjct: 140 MELECNYLLMCDNLLDPTHVAWVHAGSFGQAATKSA-PLR---VKKTDDGVIVHRWMLDV 195
Query: 278 DEPLPNFLR---FEAPC-VLQNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGAT 333
EP P + + F+ C LQ+ S K FT G+ + +
Sbjct: 196 -EPAPFYKKVVGFKGNCDRLQHYEVRYPSNALIKAIFTPAGTGGSEGKLHEDVFIMDSYN 254
Query: 334 KRSPLAKLFPKWYFHQ-----------------NASKVFEQDMGFLSSQNEVLMKETVPT 376
+P+ + ++Y+ Q + FE+D L+ + + +T P
Sbjct: 255 FMTPVTESKTRYYWFQLRNIRPDDPELSQLMTDDVQHAFEEDQNVLNEVQKGMTNKTSPH 314
Query: 377 KEL 379
+L
Sbjct: 315 IDL 317
>gi|349688384|ref|ZP_08899526.1| vanillate O-demethylase oxygenase subunit [Gluconacetobacter
oboediens 174Bp2]
Length = 350
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 78 DWT---EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
DWT WYP+ L +++ D PLG+T+ D +V+Y+ G+G + D CPHR LS G
Sbjct: 24 DWTILARCWYPVALVREL-GDQPLGVTLLDAPLVVYRAGDG-IVIADDLCPHRGVPLSMG 81
Query: 135 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
+ + C YHG++F G+GKCV++P P D+ IP +RTY E G++W + +
Sbjct: 82 KGDGQTVACAYHGFRFGGQGKCVRVPAHP-DSAIPSKLNLRTYPAVERYGLIWTCLRPEG 140
Query: 195 PPNPDKLPWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISHDRTDWTAKRED 253
+ +P ++ P +Q ++ ++ +E +D AH H TD A E+
Sbjct: 141 --DTPAIPPMPHWDDPDYQQINCPWIDIAGFAGRQVEGFIDVAHFAFVH--TDTFADPEN 196
Query: 254 A---------QPLGFEVTERTDRG 268
P GFE R+ G
Sbjct: 197 PVVPPYKTRITPDGFEAEYRSSVG 220
>gi|92112469|ref|YP_572397.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
gi|91795559|gb|ABE57698.1| Rieske (2Fe-2S) protein [Chromohalobacter salexigens DSM 3043]
Length = 370
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +D P+ + D +V+Y+ +G +RCPHR L++G + RL
Sbjct: 39 WY-VCARRDEVGRTPISRRLLDTDVVMYRTRDGRPVAMHNRCPHRAFPLAKGHVEGDRLV 97
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG QFE +G C LPA + +P +ACV+TY + + + W+WM + +P
Sbjct: 98 CGYHGMQFEPDGLCA---HLPAISHVPANACVQTYPIADRGPLTWIWMGDANLADEALIP 154
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
A + V+ + D+ + ENL+D H P H T
Sbjct: 155 ELPWLASSEWGSVTGDFHIKADYVSMHENLIDQTHFPFLHPGT 197
>gi|402820979|ref|ZP_10870539.1| Rieske (2Fe-2S) domain-containing protein [alpha proteobacterium
IMCC14465]
gi|402510211|gb|EJW20480.1| Rieske (2Fe-2S) domain-containing protein [alpha proteobacterium
IMCC14465]
Length = 358
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 98/193 (50%), Gaps = 24/193 (12%)
Query: 73 QVADYDWTEEWYP----LYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRL 128
+ ADYD E +P + D PL L F Q +VLY+ +G L CPH
Sbjct: 3 KTADYDLGEFTFPRGWFMVARTDEVSKKPLNLRYFGQDMVLYRGDSGRLVLMDAYCPHMG 62
Query: 129 AKLSEGQL---------IDG-RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYE 178
L + + IDG + C YHGWQF +G CV+IP P A IP SAC+RTY
Sbjct: 63 THLGKNETSYVVMDNEHIDGDNIRCPYHGWQFGPDGNCVEIPYSP--APIPASACIRTYP 120
Query: 179 VKESQGVVWVWM-SQKTPPN--PDKLPWFEN--FARPGFQDVSTIHELPYDHSILLENLM 233
V+E G V +W +++ PN P +LP +E+ + + +D+ + + P + +++N+
Sbjct: 121 VQEWGGSVLMWYDAEQGEPNFDPPELPQWEDPSWVQWKIEDLGELGQHPME---VIDNMA 177
Query: 234 DPAHIPISHDRTD 246
D AH+ H T+
Sbjct: 178 DKAHLAPIHGSTN 190
>gi|383642875|ref|ZP_09955281.1| oxygenase Rieske iron-sulfur component [Streptomyces chartreusis
NRRL 12338]
Length = 388
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
+ WYP+ L++ V + L T ++I L++ +G++ +DRC HR LS G +
Sbjct: 35 DHWYPVALSRRVRAERVLATTFAGERIALFRGKSGDVHALEDRCAHRQVPLSMGVVEGET 94
Query: 141 LECLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 199
L C YH W + G+G+ +IP L D + PR VR Y V+E+ G+V+V+
Sbjct: 95 LRCRYHAWAYRGDGRISQIPYLAKGDRRPPRG--VRGYPVREAYGLVFVFPGDPQRAAAT 152
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
LP F P ++ ++ + +S + ENL+D H + R + LG+
Sbjct: 153 PLPHLPAFGSPRYRTMTYSRTVRCHYSFMHENLLDMNHQFLHRG----VVGRLHPELLGY 208
Query: 260 EVTERT 265
E ER+
Sbjct: 209 EADERS 214
>gi|425746977|ref|ZP_18864997.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-323]
gi|425484404|gb|EKU50808.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-323]
Length = 355
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 84/162 (51%), Gaps = 2/162 (1%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGNR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG + +G +P + D + ++CV++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRHDGVVEDVPAV-HDCPMKGTSCVKSYPVIEQHGAIFMWFGIDANEEPKP 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
L + E A + + +H ++N+MDP H H
Sbjct: 139 LDFPEQLASQEWSSFLCQADWKVNHQYAIDNVMDPMHGSYLH 180
>gi|421852528|ref|ZP_16285215.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371479205|dbj|GAB30418.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 338
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 14/213 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ L +++ +D PLG+T+ D +V+Y+ G E+ D CPHR LS G+ +
Sbjct: 19 WHPIALVREL-EDKPLGVTLLDAPLVIYRAGE-EIVVADDLCPHRGVPLSMGKGNGQTVA 76
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-KL 201
C YHG+QF +G+CV+IP P D+ IP +RTY V E G++W + + N D +
Sbjct: 77 CAYHGFQFGHQGQCVRIPAHP-DSAIPSRLNLRTYPVVERYGLIWTCLRPQD--NEDISI 133
Query: 202 PWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISH-------DRTDWTAKRED 253
P ++ GFQ ++ ++ +E +D AH H D A
Sbjct: 134 PSMPHWDEAGFQQINCPWIDIAGFAGRQVEGFIDVAHFAFVHTETFADPDNPVVPAYMPK 193
Query: 254 AQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLR 286
P GFE R++ G E+ P +LR
Sbjct: 194 MTPYGFEAEYRSNVGNYPIGQSERGRPDFEWLR 226
>gi|388546685|ref|ZP_10149958.1| vanillate monooxygenase [Pseudomonas sp. M47T1]
gi|388275211|gb|EIK94800.1| vanillate monooxygenase [Pseudomonas sp. M47T1]
Length = 359
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++WY L + D P+ T+ + +VL++ +G+ +DRC HR LS G L
Sbjct: 25 DQWYVAALGWQLTD-KPVARTLLNTPVVLFRTSDGQAAALEDRCCHRALPLSNGTLEARG 83
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
L C YHG F GEGKC++I P KIP A V + V+E +VW+W P P
Sbjct: 84 LRCGYHGLLFNGEGKCIEI---PGQDKIPGKAQVPAFHVQERDQIVWIWFGSSQHPEPTC 140
Query: 201 LPWFENFARPG--FQDVSTIH-ELPYDHSILLENLMDPAHIPISHDRT 245
P + G D H + PY ++ +NLMD +H+ H RT
Sbjct: 141 EPPAYDVHSSGQYLYDGDVYHYDAPY--QLIHDNLMDLSHLGYVHLRT 186
>gi|367476973|ref|ZP_09476338.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. ORS 285]
gi|365270752|emb|CCD88806.1| putative dioxygenase; phtalate dioxygenase oxygenase subunit
[Bradyrhizobium sp. ORS 285]
Length = 452
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Query: 83 WYPLYLTKDVPDDAPL-GLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
W P L ++ + P+ + + QQ VL+KD G CPHR A L+ G+L G L
Sbjct: 27 WQPAALVDELAGERPVRAVKLLGQQFVLFKDAQGRYGLLDRDCPHRGADLAFGRLEHGGL 86
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C +HGW F+ +G+C++ P PA + + ++ R+Y V E G++W W+ + PP
Sbjct: 87 RCSFHGWLFDVDGQCLETPAEPAGSPLCKNVKQRSYPVIEKGGILWAWLGEGAPP---AF 143
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
P + F P + + + LE +DPAH H
Sbjct: 144 PDLDCFTAPDTYTFAFKGLIECNWLQALEVGIDPAHASFLH 184
>gi|3915234|sp|O05616.1|VANA_PSEUH RecName: Full=Vanillate O-demethylase oxygenase subunit; AltName:
Full=4-hydroxy-3-methoxybenzoate demethylase
gi|1946284|emb|CAA72287.1| a-subunit oxygenase [Pseudomonas sp.]
Length = 354
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T D D PLG + +++IV Y+ G + +D CPHR A LS G + DG+L
Sbjct: 7 WY-VACTPDEIADKPLGRQICNEKIVFYRGPEGRVAAVEDFCPHRGAPLSLGFVRDGKLI 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + EGK + +P ++ C+++Y V+E G +WVW + +P +
Sbjct: 66 CGYHGLEMGCEGKTLAMP----GQRVQGFPCIKSYAVEERYGFIWVWPGDRELADPALIH 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E P + ++ + D+ ++++NLMD H H
Sbjct: 122 HLEWADNPEWAYGGGLYHIACDYRLMIDNLMDLTHETYVH 161
>gi|84687663|ref|ZP_01015537.1| putative dioxygenase [Maritimibacter alkaliphilus HTCC2654]
gi|84664340|gb|EAQ10830.1| putative dioxygenase [Rhodobacterales bacterium HTCC2654]
Length = 441
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 8/178 (4%)
Query: 83 WYPLYLTKDVPDDA-PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
W P + D+ D P + + D+ +++++D G + CPHR A L G+ D L
Sbjct: 27 WLPFMASSDLEKDGQPQTVKLLDETLIVFRDSEGRVGLVDHICPHRGAPLVFGRNEDCGL 86
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C+YHGW+F+ +G +P P +++ +++Y E GVVW +M + + L
Sbjct: 87 RCVYHGWKFDVDGNVADMPAEPPRSRLKDRVKIKSYPCVERGGVVWTYMGDEPDESRPAL 146
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD-------WTAKRE 252
P FE P V T + LE +D AH PI H R D W AKR+
Sbjct: 147 PSFEWNMVPEENVVVTFRVQECNWLQALEGEIDSAHAPILHGRIDDGGSINQWVAKRD 204
>gi|427718313|ref|YP_007066307.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Calothrix
sp. PCC 7507]
gi|427350749|gb|AFY33473.1| Rieske (2Fe-2S) iron-sulfur domain protein [Calothrix sp. PCC 7507]
Length = 351
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + + + T + ++L + +G++ +D CPHR LS G+ +E
Sbjct: 13 WYYALPSYQIKPGKMVSRTFLGEPVLLVRSQDGKVSALRDICPHRAVPLSCGRFDGQEVE 72
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSAC-VRTYEVKESQGVVWVWMSQKTPPNPD-- 199
C YHGW+F+ G+C IP L A + S V++YE++E+QG +W++M+ P P
Sbjct: 73 CCYHGWRFDPAGRCTAIPSLVAGQETDLSRFNVKSYEIREAQGNIWIYMADPDNPQPPDS 132
Query: 200 --KLPWFENFARPGFQDVSTIHELPY-DHSILLENLMDPAHIPISHDRTDW-------TA 249
++P F Q V + + DH++ LMDPAH P H W A
Sbjct: 133 EIEIPVIAGFEERSPQLVEVMRFPCFVDHAV--TGLMDPAHSPYVHQVWWWRSAKLNEEA 190
Query: 250 KREDAQPLGF 259
++ D P GF
Sbjct: 191 RQFDPSPYGF 200
>gi|408376594|ref|ZP_11174198.1| oxidoreductase [Agrobacterium albertimagni AOL15]
gi|407749284|gb|EKF60796.1| oxidoreductase [Agrobacterium albertimagni AOL15]
Length = 223
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W P+ L+ D+ G V ++ V+++D G + ++DRCPHR ++S G + +
Sbjct: 7 WIPVALSADIEAGTSAGTLVNGEERVVWRDDKGAIHVWEDRCPHRGMRMSFGFVRGDHIA 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
CLYHGW+++ G+C IP P D ++P++ V T+ E G+VW+ P LP
Sbjct: 67 CLYHGWRYDTGGQCRYIPAHP-DLEVPQTIKVPTFAATERAGIVWMAPEGTDPAELSTLP 125
Query: 203 WFENFARPGFQDVST 217
R F D+ST
Sbjct: 126 ETAEVVRSLFLDLST 140
>gi|340363232|ref|ZP_08685576.1| phenylpropionate dioxygenase [Neisseria macacae ATCC 33926]
gi|339886308|gb|EGQ75968.1| phenylpropionate dioxygenase [Neisseria macacae ATCC 33926]
Length = 349
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 125/292 (42%), Gaps = 25/292 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYPL +K + D P+ + QQ+VL + NG+ C D CPHR LS G+++ G+L+
Sbjct: 29 WYPLIPSKQL-KDKPVHRELLGQQLVLVR-LNGQAACMDDCCPHRHVPLSAGKIVSGKLQ 86
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F+ +GK + + + + V T+ +E VWV + P P
Sbjct: 87 CCYHGWEFDAQGKVLTV--VGGMCACEEAESVPTFPCREYDDWVWVCLVSDIPFEP---- 140
Query: 203 WFENFARP-GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ------ 255
+ +F P GF+ + + + D +EN +DP H H + ++ Q
Sbjct: 141 -YADFEAPEGFETANAVRYMEGDFIHAIENFLDPTHTRYIHAKLLRNNGKQSMQISQSHH 199
Query: 256 PLGFEVTERTDRGFAGRWGKEKDEPLP-NFLRFEAPCVLQNNRELVDSKTGEKHYFTGLF 314
GF R ++ G K D+ + N F P +++ +D T H +
Sbjct: 200 ERGFVTHYRLNQQQNGLINKLFDKGITVNDAAFTFPGLVR-----IDYFTPNSHEYRISA 254
Query: 315 LCRPTGQGKSMLIVRFGATK-RSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
P +G L VR K R PL F F ++ QD + SQ
Sbjct: 255 FFIPQSKGSMGLNVRVHFPKSRFPLPIKF--HLFRPFLERLMVQDSAIIKSQ 304
>gi|339324176|ref|YP_004683869.1| hypothetical protein CNE_1c00180 [Cupriavidus necator N-1]
gi|338164333|gb|AEI75388.1| hypothetical protein CNE_1c00180 [Cupriavidus necator N-1]
Length = 237
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEG 134
+D++ + W+P+ ++ D+ + Q++ L++ +G + +++RCPHR + + G
Sbjct: 7 SDFEASAHWFPVAVSGDIRQGEITQAFLDGQELALWRSADGTVHAWENRCPHRGTRFTLG 66
Query: 135 QLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWV 188
++ID L C YHGW+FE G+C IP P PR+AC + + E+ G VW
Sbjct: 67 RIIDDTLSCAYHGWRFEASGQCTLIPANPTLTP-PRNACAKVFGTHEAGGFVWA 119
>gi|169796856|ref|YP_001714649.1| vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii AYE]
gi|184157229|ref|YP_001845568.1| phenylpropionate dioxygenase [Acinetobacter baumannii ACICU]
gi|213156753|ref|YP_002318414.1| rieske (2Fe-2S) protein [Acinetobacter baumannii AB0057]
gi|215484333|ref|YP_002326562.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB307-0294]
gi|239503023|ref|ZP_04662333.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB900]
gi|260555879|ref|ZP_05828099.1| phenylpropionate dioxygenase [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|301345243|ref|ZP_07225984.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB056]
gi|301510671|ref|ZP_07235908.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB058]
gi|301594444|ref|ZP_07239452.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB059]
gi|332854487|ref|ZP_08435394.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013150]
gi|332870923|ref|ZP_08439555.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013113]
gi|332872915|ref|ZP_08440879.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6014059]
gi|384130893|ref|YP_005513505.1| phenylpropionate dioxygenase [Acinetobacter baumannii 1656-2]
gi|384142295|ref|YP_005525005.1| putative vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii MDR-ZJ06]
gi|385236595|ref|YP_005797934.1| phenylpropionate dioxygenase [Acinetobacter baumannii TCDC-AB0715]
gi|387124867|ref|YP_006290749.1| ring-hydroxylating dioxygenase, large terminal subunit
[Acinetobacter baumannii MDR-TJ]
gi|403677084|ref|ZP_10938908.1| phenylpropionate dioxygenase [Acinetobacter sp. NCTC 10304]
gi|407931926|ref|YP_006847569.1| vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii TYTH-1]
gi|416148180|ref|ZP_11602229.1| phenylpropionate dioxygenase [Acinetobacter baumannii AB210]
gi|417553549|ref|ZP_12204618.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-81]
gi|417561934|ref|ZP_12212813.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC137]
gi|417570576|ref|ZP_12221433.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC189]
gi|417571850|ref|ZP_12222704.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Canada
BC-5]
gi|417576026|ref|ZP_12226871.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-17]
gi|417869238|ref|ZP_12514230.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii ABNIH1]
gi|417872623|ref|ZP_12517519.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii ABNIH2]
gi|417877044|ref|ZP_12521780.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii ABNIH3]
gi|417880686|ref|ZP_12525155.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii ABNIH4]
gi|421200793|ref|ZP_15657952.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC109]
gi|421202347|ref|ZP_15659498.1| vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii AC12]
gi|421456520|ref|ZP_15905862.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-123]
gi|421535547|ref|ZP_15981806.1| vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii AC30]
gi|421620577|ref|ZP_16061509.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC074]
gi|421631041|ref|ZP_16071730.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC180]
gi|421635432|ref|ZP_16076034.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-13]
gi|421643656|ref|ZP_16084150.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-235]
gi|421646300|ref|ZP_16086752.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-251]
gi|421651352|ref|ZP_16091721.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC0162]
gi|421656613|ref|ZP_16096918.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-72]
gi|421658629|ref|ZP_16098860.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-83]
gi|421661308|ref|ZP_16101484.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC110]
gi|421679862|ref|ZP_16119730.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC111]
gi|421689295|ref|ZP_16128979.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-143]
gi|421694768|ref|ZP_16134385.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-692]
gi|421700346|ref|ZP_16139863.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-58]
gi|421702749|ref|ZP_16142225.1| phenylpropionate dioxygenase [Acinetobacter baumannii ZWS1122]
gi|421706499|ref|ZP_16145912.1| phenylpropionate dioxygenase [Acinetobacter baumannii ZWS1219]
gi|421786373|ref|ZP_16222776.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-82]
gi|421792464|ref|ZP_16228617.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-2]
gi|421796080|ref|ZP_16232149.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-21]
gi|421801728|ref|ZP_16237685.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Canada BC1]
gi|421805052|ref|ZP_16240946.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-A-694]
gi|424053329|ref|ZP_17790861.1| hypothetical protein W9G_02018 [Acinetobacter baumannii Ab11111]
gi|424060796|ref|ZP_17798287.1| hypothetical protein W9K_01910 [Acinetobacter baumannii Ab33333]
gi|424063008|ref|ZP_17800493.1| hypothetical protein W9M_00291 [Acinetobacter baumannii Ab44444]
gi|425747781|ref|ZP_18865779.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-348]
gi|425752555|ref|ZP_18870462.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-113]
gi|445439292|ref|ZP_21441629.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC021]
gi|445454503|ref|ZP_21445425.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-A-92]
gi|445456349|ref|ZP_21445795.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC047]
gi|445466287|ref|ZP_21450266.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC338]
gi|445475327|ref|ZP_21453329.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-78]
gi|445491472|ref|ZP_21459787.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii AA-014]
gi|169149783|emb|CAM87674.1| putative vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii AYE]
gi|183208823|gb|ACC56221.1| Phenylpropionate dioxygenase [Acinetobacter baumannii ACICU]
gi|193076681|gb|ABO11379.2| putative vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii ATCC 17978]
gi|213055913|gb|ACJ40815.1| rieske (2Fe-2S) protein [Acinetobacter baumannii AB0057]
gi|213987162|gb|ACJ57461.1| Vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii AB307-0294]
gi|260410790|gb|EEX04088.1| phenylpropionate dioxygenase [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|322507113|gb|ADX02567.1| phenylpropionate dioxygenase [Acinetobacter baumannii 1656-2]
gi|323517093|gb|ADX91474.1| phenylpropionate dioxygenase [Acinetobacter baumannii TCDC-AB0715]
gi|332727975|gb|EGJ59368.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013150]
gi|332731886|gb|EGJ63165.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6013113]
gi|332738926|gb|EGJ69789.1| rieske [2Fe-2S] domain protein [Acinetobacter baumannii 6014059]
gi|333365187|gb|EGK47201.1| phenylpropionate dioxygenase [Acinetobacter baumannii AB210]
gi|342231009|gb|EGT95828.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii ABNIH1]
gi|342233400|gb|EGT98135.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii ABNIH2]
gi|342236483|gb|EGU01003.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii ABNIH3]
gi|342239522|gb|EGU03921.1| vanillate O-demethylase oxygenase
subunit(4-hydroxy-3-methoxybenzoate demethylase)
[Acinetobacter baumannii ABNIH4]
gi|347592788|gb|AEP05509.1| putative vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii MDR-ZJ06]
gi|385879359|gb|AFI96454.1| ring-hydroxylating dioxygenase, large terminal subunit
[Acinetobacter baumannii MDR-TJ]
gi|395524516|gb|EJG12605.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC137]
gi|395551024|gb|EJG17033.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC189]
gi|395562825|gb|EJG24478.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC109]
gi|395569247|gb|EJG29909.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-17]
gi|398328302|gb|EJN44429.1| vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii AC12]
gi|400207418|gb|EJO38388.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Canada
BC-5]
gi|400210948|gb|EJO41912.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-123]
gi|400389966|gb|EJP57013.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-81]
gi|404558675|gb|EKA63956.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-143]
gi|404567003|gb|EKA72131.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-692]
gi|404570728|gb|EKA75801.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-58]
gi|404668748|gb|EKB36657.1| hypothetical protein W9K_01910 [Acinetobacter baumannii Ab33333]
gi|404669117|gb|EKB37024.1| hypothetical protein W9G_02018 [Acinetobacter baumannii Ab11111]
gi|404675010|gb|EKB42735.1| hypothetical protein W9M_00291 [Acinetobacter baumannii Ab44444]
gi|407193564|gb|EKE64720.1| phenylpropionate dioxygenase [Acinetobacter baumannii ZWS1122]
gi|407193848|gb|EKE64997.1| phenylpropionate dioxygenase [Acinetobacter baumannii ZWS1219]
gi|407900507|gb|AFU37338.1| putative vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii TYTH-1]
gi|408504940|gb|EKK06670.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-72]
gi|408507962|gb|EKK09649.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC0162]
gi|408508339|gb|EKK10025.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-235]
gi|408517687|gb|EKK19225.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-251]
gi|408695207|gb|EKL40763.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC180]
gi|408700264|gb|EKL45727.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC074]
gi|408702251|gb|EKL47664.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-13]
gi|408709325|gb|EKL54571.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-83]
gi|408715720|gb|EKL60842.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC110]
gi|409986389|gb|EKO42583.1| vanillate O-demethylase oxygenase subunit (VanA-like)
[Acinetobacter baumannii AC30]
gi|410390681|gb|EKP43064.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC111]
gi|410400044|gb|EKP52224.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-2]
gi|410400276|gb|EKP52455.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-21]
gi|410404985|gb|EKP57038.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Canada BC1]
gi|410410102|gb|EKP62022.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-A-694]
gi|410412851|gb|EKP64699.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-82]
gi|425492820|gb|EKU59072.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-348]
gi|425498786|gb|EKU64852.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-113]
gi|444752246|gb|ELW76935.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC021]
gi|444752501|gb|ELW77185.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-A-92]
gi|444764606|gb|ELW88919.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii AA-014]
gi|444778098|gb|ELX02117.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC338]
gi|444778295|gb|ELX02313.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC047]
gi|444778991|gb|ELX02986.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-78]
gi|452954292|gb|EME59696.1| vanillate O-demethylase oxygenase subunit (VanA-like) protein
[Acinetobacter baumannii MSP4-16]
Length = 355
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAV-HECPMTGTKCLKSYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMKHR 198
Query: 261 VTE 263
TE
Sbjct: 199 TTE 201
>gi|121605619|ref|YP_982948.1| Rieske (2Fe-2S) domain-containing protein [Polaromonas
naphthalenivorans CJ2]
gi|120594588|gb|ABM38027.1| Rieske (2Fe-2S) domain protein [Polaromonas naphthalenivorans CJ2]
Length = 354
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 84/163 (51%), Gaps = 11/163 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +D+ DD PLG + ++IV Y+ G + +D CPHR A LS G + +G+L
Sbjct: 7 WYVACTPQDI-DDKPLGRKICGERIVFYRAQEGRVAALEDFCPHRGAPLSLGFVSEGKLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +GK + +P ++ +R+Y V+E G +WVW +P K+P
Sbjct: 66 CGYHGLEMGCDGKTIAMP----GQRVRGFPQIRSYPVEERYGFIWVWPGDAAQADPAKIP 121
Query: 203 ---WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
W+EN P + + + D+ ++++NLMD H H
Sbjct: 122 HQDWYEN---PEWAYGGGMFHIHCDYRLMIDNLMDLTHETYVH 161
>gi|260428311|ref|ZP_05782290.1| rieske domain protein [Citreicella sp. SE45]
gi|260422803|gb|EEX16054.1| rieske domain protein [Citreicella sp. SE45]
Length = 209
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG 139
T +W P L++D+P + + + + +++ +G + + DRCPHR +LS G +
Sbjct: 2 TTDWTPAALSRDIPAASAAPGQLGETDLAIWRSASGRIAAWSDRCPHRGMRLSHGFVRGE 61
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN-P 198
RL C+YHGW + G+CV+IP P + P + V + E+ GVVWV + TP P
Sbjct: 62 RLSCIYHGWGYGEGGQCVRIPAHP-ELTPPEAIKVPVFAASEASGVVWV--ADGTPAGAP 118
Query: 199 DKLPWFENF 207
+ P FE F
Sbjct: 119 PEFPGFEGF 127
>gi|428300003|ref|YP_007138309.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein [Calothrix
sp. PCC 6303]
gi|428236547|gb|AFZ02337.1| Rieske (2Fe-2S) iron-sulfur domain protein [Calothrix sp. PCC 6303]
Length = 340
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 91/198 (45%), Gaps = 21/198 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +P T+ +Q+IVL+ D G +DRC HR A+LS G++++G +
Sbjct: 13 WYPVVPINLLSKSSPHAFTLLNQKIVLWLDSQGNPAAVKDRCCHRSAQLSLGKVVNGDIV 72
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW F G C +PQL + IP + V +Y E G WV + P+ +P
Sbjct: 73 CPYHGWNFNSTGTCTHVPQL-NNGMIPSNYQVTSYACVERYGYAWVCLEDPLCDIPN-IP 130
Query: 203 WFENFARPGFQDVSTIHEL--PYDHSIL--LENLMDPAHIPISHDRTDWTAKREDAQPLG 258
NF + IHE P++ + L +EN D AH H T E P
Sbjct: 131 EARNF------EYRLIHEFYEPWNCAGLRVMENEFDTAHPTFVHTTT--FGNEEHPIPDK 182
Query: 259 FEVTERTDRGFAGRWGKE 276
E+ E+ WG E
Sbjct: 183 MELEEK-------EWGIE 193
>gi|429197812|ref|ZP_19189686.1| Rieske [2Fe-2S] domain protein [Streptomyces ipomoeae 91-03]
gi|428666507|gb|EKX65656.1| Rieske [2Fe-2S] domain protein [Streptomyces ipomoeae 91-03]
Length = 354
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 132/321 (41%), Gaps = 47/321 (14%)
Query: 98 LGLTVFDQQIVLYK-DGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKC 156
LG T+ + +V Y+ + G DRC HR LS+ L R+ C YHG+ ++ G C
Sbjct: 26 LGRTILGEPLVFYRTEEEGTPVALHDRCVHRRYPLSKSGLDGDRIVCGYHGFTYDTTGTC 85
Query: 157 VKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVS 216
V +P +IPR+A V +Y V E ++WVW+ +P +P ++ PG+ V
Sbjct: 86 VYVP---GQKRIPRTARVASYPVVEQDSLIWVWIGDPALADPQTIPRAKHLDSPGWVTVR 142
Query: 217 TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTE-----RTDR---- 267
+ + D+ +L++NL+D +H H T + + P+ EV E R R
Sbjct: 143 GMEPIDADYGLLVDNLLDLSHETYLHGGYIGTPEVAET-PITTEVDEGAGIVRVSRHMDD 201
Query: 268 -----------GFAGRWGKEKDEPLPNFLRFEAPCVLQNNREL--------VDSKTGEKH 308
G GR + +D + + APC+ + + D
Sbjct: 202 AECPPFYAKSTGIEGRITRWQD------IEYHAPCLYLLHSRIAPVGVLPEADGSDPNGF 255
Query: 309 YFTGLFLCRPTGQGKSM---LIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
+ + P+ GK ++ R AT + + + N V QD+ L+
Sbjct: 256 HTEITYAITPSSDGKVYDFWMVSRDWATDNDEVTE-----FLRGNNHTVVMQDVDALNLL 310
Query: 366 NEVLMKETVPTKELYLNLRSS 386
E L E +EL +N+ +
Sbjct: 311 QETLGTERTGYQELSINIDTG 331
>gi|298250188|ref|ZP_06973992.1| Rieske (2Fe-2S) iron-sulfur domain protein protein [Ktedonobacter
racemifer DSM 44963]
gi|297548192|gb|EFH82059.1| Rieske (2Fe-2S) iron-sulfur domain protein protein [Ktedonobacter
racemifer DSM 44963]
Length = 324
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 74 VADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSE 133
+ D +W+P+ + D+ + P+ + + +VL++ +GE+ ++D C HR AKLS
Sbjct: 3 IQDTVLINDWHPIARSADIVEGEPVAARLLGEDLVLWRSADGEIHAWRDLCIHRGAKLSL 62
Query: 134 GQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK 193
G+ L C YHGW + GEG+C++ P P P A + Y+ +E +WV + +
Sbjct: 63 GKATKTTLACPYHGWVYNGEGRCIRFPAHPEQCP-PAKAQAKVYQARERYNTIWVSLGE- 120
Query: 194 TPPNPDKLPWFENFARPGFQD-VSTIHELPYDHSILLENLMDPAHIPISH 242
P D +P F + F+ V +++ L+EN +D AH P H
Sbjct: 121 --PERD-IPVFPEWDDQRFKAVVCGPYKVQAGGPRLIENFLDVAHFPFVH 167
>gi|398811407|ref|ZP_10570207.1| ring-hydroxylating dioxygenase, large terminal subunit [Variovorax
sp. CF313]
gi|398080780|gb|EJL71578.1| ring-hydroxylating dioxygenase, large terminal subunit [Variovorax
sp. CF313]
Length = 351
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 5/160 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T + DD PLG + +++VLY+ G+ +D CPHR A LS G +++G+L
Sbjct: 7 WY-VACTANEIDDKPLGRMICGEKLVLYRAAEGKAAALEDFCPHRGAPLSLGSVVEGKLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +GK V +P ++ +R++ V E G VWVW +P KL
Sbjct: 66 CGYHGLEMGCDGKTVAMP----GQRVRGFPAIRSFPVIERYGFVWVWPGDPALSDPAKLH 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E P + + + D+ ++++NLMD H H
Sbjct: 122 HLEWAESPDWAYGGGLFHIQCDYRLMIDNLMDLTHETYVH 161
>gi|260551175|ref|ZP_05825378.1| phenylpropionate dioxygenase [Acinetobacter sp. RUH2624]
gi|424056450|ref|ZP_17793971.1| hypothetical protein W9I_02820 [Acinetobacter nosocomialis Ab22222]
gi|425741003|ref|ZP_18859162.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-487]
gi|260405780|gb|EEW99269.1| phenylpropionate dioxygenase [Acinetobacter sp. RUH2624]
gi|407441490|gb|EKF47996.1| hypothetical protein W9I_02820 [Acinetobacter nosocomialis Ab22222]
gi|425493850|gb|EKU60074.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-487]
Length = 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAV-HECPMTGTKCLKSYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMKHR 198
Query: 261 VTE 263
TE
Sbjct: 199 TTE 201
>gi|445400960|ref|ZP_21430261.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-57]
gi|444783087|gb|ELX06949.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-57]
Length = 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAV-HECPMTGTKCLKSYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMKHR 198
Query: 261 VTE 263
TE
Sbjct: 199 TTE 201
>gi|262279949|ref|ZP_06057734.1| Rieske protein [Acinetobacter calcoaceticus RUH2202]
gi|262260300|gb|EEY79033.1| Rieske protein [Acinetobacter calcoaceticus RUH2202]
Length = 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 5/189 (2%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G + +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGRVHALEDRCPHRGARLSLGWNLGDR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKSYPVSEQHGAIFIWFGIDANEQPKP 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
L + E A + + +H ++N+MDP H H + A E +
Sbjct: 139 LEFPEQLASEEWSAFLCQADWKVNHQYAIDNVMDPMHGTYLHATSHSMADGERTAEMKHR 198
Query: 261 VTERTDRGF 269
TD GF
Sbjct: 199 T---TDNGF 204
>gi|421625348|ref|ZP_16066201.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC098]
gi|408699017|gb|EKL44502.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC098]
Length = 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAV-HECPMTGTKCLKSYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMKHR 198
Query: 261 VTE 263
TE
Sbjct: 199 TTE 201
>gi|421675042|ref|ZP_16114968.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC065]
gi|421693385|ref|ZP_16133027.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-116]
gi|404557888|gb|EKA63176.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii IS-116]
gi|410383057|gb|EKP35591.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC065]
Length = 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAV-HECPMTGTKCLKSYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMKHR 198
Query: 261 VTE 263
TE
Sbjct: 199 TTE 201
>gi|417545143|ref|ZP_12196229.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC032]
gi|421669761|ref|ZP_16109774.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC099]
gi|400383031|gb|EJP41709.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC032]
gi|410387230|gb|EKP39686.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC099]
Length = 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG + +G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAV-HECPMTGTKCLKSYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMKHR 198
Query: 261 VTE 263
TE
Sbjct: 199 TTE 201
>gi|86747254|ref|YP_483750.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
gi|86570282|gb|ABD04839.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
Length = 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 83 WYPLYLTKDVPDDAPLGL-TVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
WYPL ++DV LG + +V+Y+ GE D CPHRLA LS G+L +
Sbjct: 15 WYPLTWSRDV--TRALGCHRILGIDLVVYRSEAGEPIALDDVCPHRLAPLSIGKLKGDAI 72
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
EC YHG F +G+C++IP P IP +A V +Y + E G+VW+W +P +
Sbjct: 73 ECGYHGMTFARDGRCIRIPGQPI---IPPNARVPSYPLHEKMGLVWIWPGDPALADPALI 129
Query: 202 PWFENFARPGFQDV-STIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
+ +P + + ++ L +NL DPAH+ H T A E+ P+
Sbjct: 130 YDLPQYGQPDWHAAHGDALRIGTNYLNLADNLCDPAHVSFVHLSTLGNAASEEI-PVEHT 188
Query: 261 VTERTDRGFAGRWGKEKDEPLPNFLRF 287
V R RW + P+P F ++
Sbjct: 189 VNARG--VLVWRWINDA-PPIPLFAKY 212
>gi|374603828|ref|ZP_09676802.1| Rieske (2Fe-2S) domain-containing protein [Paenibacillus
dendritiformis C454]
gi|374390553|gb|EHQ61901.1| Rieske (2Fe-2S) domain-containing protein [Paenibacillus
dendritiformis C454]
Length = 325
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 84/159 (52%), Gaps = 16/159 (10%)
Query: 91 DVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQF 150
D + P+ + + +++V+++ G+G + ++D C HR A LS G + +G L C YH W+F
Sbjct: 19 DEVKEKPIQVHIMGERVVVFRTGDG-VHAFKDLCIHRGAALSLGCVKNGHLVCPYHAWEF 77
Query: 151 EGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPW--FENFA 208
+ G CV IPQLPA+ IP+ A V Y +E G +WV + K PW F +
Sbjct: 78 DASGACVHIPQLPAEQAIPKKAQVTAYGCEERYGFIWVNLGGK------DAPWFPFPEYE 131
Query: 209 RPGFQDV----STIHELPYDHSILLENLMDPAHIPISHD 243
G++ V T+ P ++EN +D H+ + H+
Sbjct: 132 AEGWRHVVWGPQTVEAKP---PRIVENFLDVGHLAVVHE 167
>gi|113473903|ref|YP_718166.1| putative phthalate dioxygenase [Sphingomonas sp. KA1]
gi|112821583|dbj|BAF03454.1| putative phthalate dioxygenase [Sphingomonas sp. KA1]
Length = 442
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 81 EEWYPLYLTKDV--PDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLID 138
+ W P + ++V PD PL + + + +V+++D G + + CPHR A L+ G+ +
Sbjct: 24 QHWLPACMIEEVAEPDGTPLRVRLLGENMVVFRDSEGRIGALDELCPHRRASLAFGRNEE 83
Query: 139 GRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK----- 193
L CLYHGW+F+ G + + PADAK+ + + Y V+E+ G VWVWM
Sbjct: 84 CGLRCLYHGWKFDVNGNALDMSSEPADAKLRETMKTKAYPVREAGGFVWVWMGDTDNVLP 143
Query: 194 -TPPN 197
PPN
Sbjct: 144 FDPPN 148
>gi|347528222|ref|YP_004834969.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345136903|dbj|BAK66512.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 373
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 9/188 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + +V + PL + DQ +++Y+D G QDRCPHR A LS G+ + +E
Sbjct: 9 WYAAAFSDEV-GEKPLARKLLDQDLMIYRDSAGRPILLQDRCPHRFAPLSLGKTVGDEIE 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F+ G C P + + R+A VR Y V E G++W W + LP
Sbjct: 68 CPYHGLRFDRTGACSHNPHMKGGGPL-RAAAVRAYPVMEKYGILWFWPGDPGFADEAILP 126
Query: 203 ---WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
+ E R ++ V + + ++ ++++NL+D +H H + K DA+
Sbjct: 127 KVKFLEETDR--YRLVKGLLHVEGNYQLVIDNLLDLSHAQFIH--PGFAIKGVDAEQALA 182
Query: 260 EVTERTDR 267
T R +R
Sbjct: 183 ATTTRLER 190
>gi|421465153|ref|ZP_15913841.1| Rieske [2Fe-2S] domain protein [Acinetobacter radioresistens
WC-A-157]
gi|400204415|gb|EJO35399.1| Rieske [2Fe-2S] domain protein [Acinetobacter radioresistens
WC-A-157]
Length = 355
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 2/183 (1%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG + +G +P + + + + C++ Y V E G +++W +P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKNYPVIEQHGAIFIWFDLDANESPKP 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
L + E A + + +H ++N+MDP H H + A E +
Sbjct: 139 LEFPEQLASEEWSAFLCQADWKVNHQYAIDNVMDPMHGTYLHATSHSMADGERTAEMKHR 198
Query: 261 VTE 263
TE
Sbjct: 199 TTE 201
>gi|393774181|ref|ZP_10362554.1| Rieske (2Fe-2S) domain-containing protein [Novosphingobium sp. Rr
2-17]
gi|392720390|gb|EIZ77882.1| Rieske (2Fe-2S) domain-containing protein [Novosphingobium sp. Rr
2-17]
Length = 437
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 4/161 (2%)
Query: 83 WYPLYLTKDVPDDAPL-GLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
W P+ L +++ P + V Q +VL++DG G+L CPHR A L+ G+L DG L
Sbjct: 26 WQPIALLEELDGPRPAKAVKVLGQDMVLFRDGAGQLGLLDRDCPHRGADLAFGRLEDGGL 85
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
CL+HGW F+ +G C++ P P+ + + R Y V E G+++ ++ + PP
Sbjct: 86 RCLFHGWLFDVDGNCIQTPGEPSGSTLCTRVKQRAYPVVERAGMIFGFLGEGEPP---AF 142
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
P + FA P + L + LE +DPAH H
Sbjct: 143 PGLDCFAAPDSHVFAFKGYLDCNWLQALEVGVDPAHASFLH 183
>gi|356577261|ref|XP_003556746.1| PREDICTED: LOW QUALITY PROTEIN: pheophorbide a oxygenase,
chloroplastic-like [Glycine max]
Length = 330
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 110/266 (41%), Gaps = 30/266 (11%)
Query: 117 LRCYQDRCPHRLAKLSEGQLID-GRLECLYHGWQFEGEGKCVKIPQLPADAKIP---RSA 172
L + D C HRLA LS G++ GRL C YH W F G+G+ IPQ P D + + A
Sbjct: 70 LAVHDDACSHRLAPLSNGRIDQWGRLXCAYHDWCFNGKGESKFIPQAPPDGPLIFHFKKA 129
Query: 173 CVRTYEVKESQGVVWVWMSQKTPPNPDKL-----PWFENFARPGFQDVSTIHELPYDHSI 227
CV Y ++W ++ P D + P+ P + ++PY + +
Sbjct: 130 CVAAYPSTVQNDILW-FLPNTDPQYKDIITRKRPPFIPETDDPSSTKLMGNRDIPYGYEL 188
Query: 228 LLENLMDPAHIPISHDRTDWTAK--REDAQPLGFEV---TERTD-RGFAGRWGKEKDEPL 281
+ENLMDP H+P +H T K R F + E+ D GF+ G+
Sbjct: 189 PIENLMDPTHVPYAHYGLMGTLKPCRHIRCMYLFXLDMSIEKLDINGFSASQGE------ 242
Query: 282 PNFLRFEAPCVL-----QNNRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRS 336
+F PC+ RE S +K +FLC KS I F S
Sbjct: 243 -GISKFMEPCIFYAYTPDQPRETQKSSAQKK--ICLVFLCALVSPSKSRFIWSFPRNFAS 299
Query: 337 PLAKLFPKWYFHQNASKVFEQDMGFL 362
+ K+ P+W H + + D+ L
Sbjct: 300 WMDKILPRWISHMGVKLILDSDLYLL 325
>gi|349609943|ref|ZP_08889306.1| hypothetical protein HMPREF1028_01281 [Neisseria sp. GT4A_CT1]
gi|348610886|gb|EGY60565.1| hypothetical protein HMPREF1028_01281 [Neisseria sp. GT4A_CT1]
Length = 330
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 124/292 (42%), Gaps = 25/292 (8%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYPL +K + D P+ + QQ+VL + NG C D CPHR LS G+++ G+L+
Sbjct: 10 WYPLIPSKQL-KDKPVHRELLGQQLVLVR-LNGHAACMDDCCPHRHVPLSAGKIVSGKLQ 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGW+F+ +GK + + + + V T+ +E VWV + P P
Sbjct: 68 CCYHGWEFDAQGKVLTV--VGGMCACEEAESVPTFPCREYDDWVWVCLVSDIPFEP---- 121
Query: 203 WFENFARP-GFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ------ 255
+ +F P GF+ + + + D +EN +DP H H + ++ Q
Sbjct: 122 -YADFEAPEGFETANAVRYMEGDFIHAIENFLDPTHTRYIHAKLLRNNGKQSMQISQSHH 180
Query: 256 PLGFEVTERTDRGFAGRWGKEKDEPLP-NFLRFEAPCVLQNNRELVDSKTGEKHYFTGLF 314
GF R ++ G K D+ + N F P +++ +D T H +
Sbjct: 181 ERGFVTHYRLNQQQNGLINKLFDKGITVNDAAFTFPGLVR-----IDYFTPNSHEYRISA 235
Query: 315 LCRPTGQGKSMLIVRFGATK-RSPLAKLFPKWYFHQNASKVFEQDMGFLSSQ 365
P +G L VR K R PL F F ++ QD + SQ
Sbjct: 236 FFIPQNKGSMGLNVRVHFPKSRFPLPIKF--HLFRPFLERLMVQDSAIIKSQ 285
>gi|148556168|ref|YP_001263750.1| Rieske (2Fe-2S) domain-containing protein [Sphingomonas wittichii
RW1]
gi|148501358|gb|ABQ69612.1| Rieske (2Fe-2S) domain protein [Sphingomonas wittichii RW1]
Length = 353
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++ +V +A + +++Y+ +G DRCPHR A L GQ +
Sbjct: 12 WYVAAMSSEVEGEALFHRRILGTSVMIYRLADGTPVAMHDRCPHRFAPLHLGQREGDEIA 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YH +F+ +G+C P + +IP +A VR + + E G +W+WM + P+P LP
Sbjct: 72 CRYHALRFDADGRCTHNPH--GNGRIPDAARVRRFPLLERYGFLWIWMDD-SDPDPALLP 128
Query: 203 WFENFARPGFQDVS-TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
F V+ T + ++ ++++N+MD +H I H + R P+ +V
Sbjct: 129 DFSPLEEGHPNAVAQTYMHMDVNYELIIDNVMDLSH--IDHVHGEIITTRGQLSPVVPKV 186
Query: 262 TERTDRGFAGRW 273
ER D + RW
Sbjct: 187 RER-DTHISARW 197
>gi|428222533|ref|YP_007106703.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
gi|427995873|gb|AFY74568.1| ring-hydroxylating dioxygenase, large terminal subunit
[Synechococcus sp. PCC 7502]
Length = 345
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 12/192 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ ++ D P T+ +Q+IVL+ D G+ +D+C HR A+LS G + +G +
Sbjct: 13 WYPVIPIANL-SDGPKSFTLLEQKIVLWLDELGKPAAAKDQCCHRSAQLSLGTVENGAIV 71
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHGWQF+ G CV IPQ + +P ++ + Y+ E G VWV + + P
Sbjct: 72 CPYHGWQFDRAGNCVHIPQ-SQNISVPSASRINAYKCTERYGYVWVCLDEPIAEVPTITE 130
Query: 203 WFENFARPGFQDVSTIHELPYDHSIL--LENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
FE P F+ + +E P+ + L +EN D AH H T ++ P E
Sbjct: 131 AFE----PNFRLIREFYE-PWKCAGLRVMENEFDFAHPTFVHTGT--FGSKDHPTPELLE 183
Query: 261 VTERTDRGFAGR 272
+ E T G G+
Sbjct: 184 IVE-TPEGLKGQ 194
>gi|121608346|ref|YP_996153.1| vanillate monooxygenase [Verminephrobacter eiseniae EF01-2]
gi|121552986|gb|ABM57135.1| Vanillate monooxygenase [Verminephrobacter eiseniae EF01-2]
Length = 363
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 106 QIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPAD 165
+ LY+ GE ++RCPHR L++G+L+ L C YHG QF+ G CV +P +P
Sbjct: 52 DVALYRTLAGEPIAVRNRCPHRSFPLAKGKLVGDILVCGYHGMQFDPSGHCVNMPSMPI- 110
Query: 166 AKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVSTIHELPYDH 225
+P +A VRT+ V E +VW+WM + +P + P ++ V+ + D+
Sbjct: 111 --VPTNASVRTFPVVERAPLVWIWMGDPDKADEALVPGTHWLSDPLWKSVTGDFHMQSDY 168
Query: 226 SILLENLMDPAHIPISHDRT 245
+ ENL+D H P H T
Sbjct: 169 VSMHENLLDQTHFPFLHPGT 188
>gi|421856374|ref|ZP_16288741.1| putative Rieske iron-sulfur protein [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|403188313|dbj|GAB74942.1| putative Rieske iron-sulfur protein [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 355
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 5/189 (2%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG + +G +P + + + + C++ Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAV-HECPMTGTKCLKNYPVIEQHGAIFIWFGLDANEQPAP 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
L + E A + + +H ++N+MDP H H + A E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHATSHSMADGERTAEMKHR 198
Query: 261 VTERTDRGF 269
TD GF
Sbjct: 199 T---TDNGF 204
>gi|417551278|ref|ZP_12202356.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-18]
gi|417565060|ref|ZP_12215934.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC143]
gi|395556816|gb|EJG22817.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii OIFC143]
gi|400385733|gb|EJP48808.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii Naval-18]
Length = 355
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 2/183 (1%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG + G +P + + + + C+++Y V E G +++W P
Sbjct: 80 VACWYHGVEVRANGVVADVPAV-HECPMTGTKCLKSYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
L + E A + + +H ++N+MDP H H + A+ E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHCTSHSMAEGERTAEMKHR 198
Query: 261 VTE 263
TE
Sbjct: 199 TTE 201
>gi|91782301|ref|YP_557507.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia xenovorans
LB400]
gi|91686255|gb|ABE29455.1| phthalate 4,5-dioxygenase, oxygenase subunit [Burkholderia
xenovorans LB400]
Length = 446
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 8/163 (4%)
Query: 83 WYPLYLTKDVPDDA-PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
W P L+ +V D P+ L + ++++ ++D +G + RCPHR A L G+ + +
Sbjct: 26 WLPAVLSHEVKADGDPVRLMLLGEKLIAFRDSSGRVGVLDHRCPHRCASLFVGRNEENGI 85
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C+YHGW+F+ +G CV +P +PA R Y+ E G++WV+M + NP L
Sbjct: 86 RCVYHGWKFDVDGNCVDMPSVPARLDFKEKVHARAYKAVERNGLIWVYMGENQ-NNPPPL 144
Query: 202 PWFENFARPGFQDVSTIHELPYDHSIL--LENLMDPAHIPISH 242
P E PG S I L + L LE +D +H+ H
Sbjct: 145 PAIEANMIPG----SKIWCLQRQCNWLQALEGDIDTSHVGFLH 183
>gi|192292505|ref|YP_001993110.1| vanillate monooxygenase [Rhodopseudomonas palustris TIE-1]
gi|192286254|gb|ACF02635.1| Vanillate monooxygenase [Rhodopseudomonas palustris TIE-1]
Length = 347
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 135/324 (41%), Gaps = 39/324 (12%)
Query: 101 TVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 160
T+ + +V+Y+ +G + +D C HRL LS+G+L + C YHG +F +G+C
Sbjct: 26 TICGKHVVMYRKADGNVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKFNPQGRCT--- 82
Query: 161 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP---WFENFARPGFQDVST 217
+P+ I SACVR+Y V E VW+WM +P +P W ++ A G D T
Sbjct: 83 YMPSQETINPSACVRSYPVVERHRFVWLWMGDPVLADPALVPDMHWNDDPAWAG--DGKT 140
Query: 218 IHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEK 277
I+ D ++++NLMD H H + E F+VT RW K
Sbjct: 141 IYA-KCDWRLVVDNLMDLTHETYVHGS---SIGNEAVAEAPFDVTHGDRTVTVTRWMKGI 196
Query: 278 DEPLP---------------NFLRFEAPCVLQNNRELVDSKTG-----EKHYFTGLFLCR 317
EP P +RFEAP + + + + TG G L
Sbjct: 197 -EPPPFWAAQLGKPGLVDRWQIIRFEAPGTVTIDVGVAPAGTGAPEGDRSQGVNGFVLNT 255
Query: 318 PTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTK 377
T + + + + L+ + S +F +D L +Q +++ P +
Sbjct: 256 MTPETDTTCHYFWAFVRNYRLSDQRLTTEIREGVSGIFREDEIILEAQQRAMLEN--PDR 313
Query: 378 ELY-LNLRSSDTWVAEYRKWMDKV 400
Y LN+ + W RK +D++
Sbjct: 314 VFYNLNIDAGAMW---SRKLIDRM 334
>gi|78061591|ref|YP_371499.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
gi|77969476|gb|ABB10855.1| Rieske (2Fe-2S) protein [Burkholderia sp. 383]
Length = 382
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 130/317 (41%), Gaps = 47/317 (14%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
E+W+ +++P D PLG+ + D IVL++ +G + D C HR +LS G++
Sbjct: 38 EQWFVACTERELPRDKPLGVRILDTGIVLFRQRDGRIAALIDHCVHRGTRLSAGKVDRDT 97
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSAC------VRTYEVKESQGVVWVWMSQKT 194
L C YHGW+++GEG+ V +P + D P RT V+ G+VWV++
Sbjct: 98 LVCPYHGWRYDGEGQVVHVPSI--DGTQPTGTPGRYPFRQRTLPVQLLDGLVWVYLGTGD 155
Query: 195 P--------PNPDKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTD 246
P P D PW F ++ D ++L +N MD H HD
Sbjct: 156 PSARTIFRMPFCDVAPWQSYF---------MVNTFDGDIAMLAQNFMDVPHTVFVHDGI- 205
Query: 247 WTAKREDAQPLGFEVTERT---------DR-GFAGRWGKEKDE-PLPNFLRFEAPCVLQN 295
+ + R A T+ + D+ GF W D PL + RF AP V +
Sbjct: 206 FRSSRGQAMEATVATTQDSVAVTYHDGDDKIGFCLDWLTNPDRVPLAHVDRFIAPNVTR- 264
Query: 296 NRELVDSKTGEKHYFTGLFLCRPTGQGKSMLIVRFGATKRSP---LAKLFPKWYFHQNAS 352
D GE+ F + P +S + R P L L P + +
Sbjct: 265 ----CDYLWGERSGFLIVSQITPIDARRSRVYTYIAYRFRLPRWMLRALRPLLNLYTHL- 319
Query: 353 KVFEQDMGFLSSQNEVL 369
V +QD+ + + + L
Sbjct: 320 -VIQQDVRIMRAHRQGL 335
>gi|374984177|ref|YP_004959672.1| putative dioxygenase [Streptomyces bingchenggensis BCW-1]
gi|297154829|gb|ADI04541.1| putative dioxygenase [Streptomyces bingchenggensis BCW-1]
Length = 450
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Query: 83 WYPLYLTKDVPDDAPL-GLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
W P+ L++++ PL V Q +VL++D G L CPHR A LS G+L DG L
Sbjct: 26 WQPIALSEELDGIRPLVAPKVMGQDLVLFRDDGGRLGLVDRGCPHRGADLSLGRLEDGGL 85
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C +HGW F +G C+ P P + + + +Y V+E G++W ++ PP +L
Sbjct: 86 RCCFHGWLFGRDGSCLDTPAEPVGSTLASRVTLGSYPVRERNGIIWGYLGPGEPP---EL 142
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
P + F P + + L + LE +DPAH H
Sbjct: 143 PALDCFRAPADRAFAWKGLLECNWLQALEVGIDPAHASYLH 183
>gi|399908238|ref|ZP_10776790.1| Rieske (2Fe-2S) protein [Halomonas sp. KM-1]
Length = 343
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 99/190 (52%), Gaps = 10/190 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V + P+G+T + + L++D +G + +DRCPHR A+LS+G + RL
Sbjct: 23 WYPVLASWEVGSN-PVGITRLGENLALWRDHDGMVHAIEDRCPHRGARLSKGWNLGDRLA 81
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMS---QKTPPNPD 199
C YHG + GEG +P + ++ + +ACVR Y V+E+QG ++V+ + PP +
Sbjct: 82 CWYHGVEVNGEGTVCDVPAI-GNSPMVGTACVRHYPVQEAQGAIFVFFGTTPDEAPPALE 140
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGF 259
+ A G + + Y +++ +N+MDP H H + A+ + +
Sbjct: 141 LPEQLTDEASYGHFLCTATWKCNYQYAV--DNVMDPMHGTYLHADSHSMAEGDRQAEM-- 196
Query: 260 EVTERTDRGF 269
V E T GF
Sbjct: 197 -VLEPTQTGF 205
>gi|374288505|ref|YP_005035590.1| putative oxidoreductase alpha subunit [Bacteriovorax marinus SJ]
gi|301167046|emb|CBW26625.1| putative oxidoreductase alpha subunit [Bacteriovorax marinus SJ]
Length = 345
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 132/304 (43%), Gaps = 30/304 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +K++ + L T+ D+ I L++ +G QDRC HR ++LS+G + DG+L+
Sbjct: 13 WYIACESKELGKNQVLARTILDEWIALFRGDDGAPVALQDRCIHRNSQLSKGWVKDGQLQ 72
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPN--PDK 200
C YHGW F+ GK IP + K S C ++YE E G +++ + + + P +
Sbjct: 73 CSYHGWTFDKVGKLTGIPSEGPNQKKVGSRCAKSYECIEQDGFIFIRLEKNENLDIPPHR 132
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTA---------KR 251
+P ++ G+Q V + EN +D H HD+ A +R
Sbjct: 133 MP---HYGEKGWQTVRLFNVFKNSVINCAENYIDVPHTVFVHDKIFRDALDEKVTTKVQR 189
Query: 252 EDAQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFT 311
+D + E + G+ + K EP+ + + P N V G+K ++
Sbjct: 190 KDGAVHIEYIGETDNLGWFSWFLNPKKEPITHIDHYYMP-----NITSVQYIFGKKEFWI 244
Query: 312 GLFLCRPTGQGKSM----LIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNE 367
C P + L +FG LAK P F KV EQD+ L +Q E
Sbjct: 245 -TSQCIPINDELTWVWTDLTYKFGPI--GVLAK--PIVAFQ--GQKVIEQDIVALDNQME 297
Query: 368 VLMK 371
V+ K
Sbjct: 298 VIKK 301
>gi|392950448|ref|ZP_10316003.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
gi|392950635|ref|ZP_10316190.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
gi|391859410|gb|EIT69938.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
gi|391859597|gb|EIT70125.1| putative vanillate O-demethylase oxygenase subunit A
[Hydrocarboniphaga effusa AP103]
Length = 359
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY L+ ++ + T+ D +V+Y+ +G DRCPHR + LS G +
Sbjct: 11 WYVAALSSELESEKLFARTLLDTPVVMYRQRDGAAVALHDRCPHRFSPLSMGHRDGDNVV 70
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F G+CV P + IP +A VRT+ + E G +W+WM + P + LP
Sbjct: 71 CPYHGLRFNTAGQCVHNPH--GNGAIPAAAKVRTFPLIERYGFIWIWMGE-VPADASALP 127
Query: 203 WFENFARPGFQDVS-TIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
+ R V+ T P + ++ +N+MD +H + H + + R P ++
Sbjct: 128 DYGPIDRGHPNGVAHTYMRRPCHYELITDNVMDLSH--VDHLHGEIISTRGQLSPKIPKL 185
Query: 262 TERTDRGFAGRWGKEKDEPLPNFLRF 287
E D + W E+ P+ F F
Sbjct: 186 QE-ADGEISVHWQWEQTPPIMIFNAF 210
>gi|255319176|ref|ZP_05360393.1| rieske [2Fe-2S] domain protein [Acinetobacter radioresistens SK82]
gi|262379679|ref|ZP_06072835.1| phenylpropionate dioxygenase [Acinetobacter radioresistens SH164]
gi|255303569|gb|EET82769.1| rieske [2Fe-2S] domain protein [Acinetobacter radioresistens SK82]
gi|262299136|gb|EEY87049.1| phenylpropionate dioxygenase [Acinetobacter radioresistens SH164]
Length = 355
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 5/189 (2%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG + +G +P + + + + C++ Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAV-HECPMTGTKCLKNYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
L + E A + + +H ++N+MDP H H + A E +
Sbjct: 139 LEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLHATSHSMADGERTAEMKHR 198
Query: 261 VTERTDRGF 269
TD GF
Sbjct: 199 T---TDNGF 204
>gi|86749031|ref|YP_485527.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
gi|86572059|gb|ABD06616.1| Rieske (2Fe-2S) protein [Rhodopseudomonas palustris HaA2]
Length = 347
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 136/323 (42%), Gaps = 37/323 (11%)
Query: 101 TVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 160
T+ ++ +V+Y+ +G + +D C HRL LS+G+L + C YHG +F +G+C
Sbjct: 26 TICNKHVVMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKFSPQGRCT--- 82
Query: 161 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP---WFENFARPGFQDVST 217
+P+ I SACVR+Y V E VW+WM +P +P W ++ A G D T
Sbjct: 83 YMPSQETINPSACVRSYPVVERHRFVWLWMGDPALADPALVPDMHWNDDPAWAG--DGKT 140
Query: 218 IHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTE--------RTDRGF 269
IH D ++++NLMD H H + E F+VT R RG
Sbjct: 141 IHAR-CDWRLVVDNLMDLTHETYVHGS---SIGNEAVAEAPFDVTHGDRTVTVTRWMRGI 196
Query: 270 AGR--WGKEKDEPLP----NFLRFEAPCVLQNNRELVDSKTG-----EKHYFTGLFLCRP 318
W + +P P +RFEAP + + + + +G G L
Sbjct: 197 EAPPFWAAQLRKPGPVDRWQIIRFEAPGTVTIDVGVAPAGSGAPEGDRSQGVNGFVLNTM 256
Query: 319 TGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKE 378
T + + + + L + S +F +D L +Q + + P +
Sbjct: 257 TPETDTTCHYFWAFVRNYRLGDQRLTTEIREGVSGIFGEDEIILEAQQRAISEN--PDRV 314
Query: 379 LY-LNLRSSDTWVAEYRKWMDKV 400
Y LN+ + W RK +D++
Sbjct: 315 FYNLNIDAGAMW---SRKLIDRM 334
>gi|114462401|gb|ABI75137.1| phenylpropionate dioxygenase [Dolichospermum circinale AWQC131C]
gi|194740223|gb|ACF94649.1| dioxygenase [Dolichospermum circinale AWQC131C]
Length = 339
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 12/196 (6%)
Query: 75 ADYDWTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYK--DGNGELRCYQDRCPHRLAKLS 132
AD WY + +D + ++ ++VL++ + N ++ +QD CPHR LS
Sbjct: 4 ADQILINNWYVVANGEDCKPGSITTASLLGVKLVLWRSDEPNSPIQVWQDHCPHRGVALS 63
Query: 133 EGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQ 192
G++++ L C YHGW++ GKCV+IP P D P SA +TY +E G+VWV +
Sbjct: 64 MGEIVNNTLVCAYHGWRYNEAGKCVQIPAHP-DMIPPASAIAKTYHCQERYGLVWVCLG- 121
Query: 193 KTPPNP-DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAK 250
NP + +P F + P + T L + +++N +D +H P HD
Sbjct: 122 ----NPVNDIPEFPEWDDPNYHKTYTKSYLIQASAFRVMDNFIDVSHFPFVHDGG--LGN 175
Query: 251 REDAQPLGFEVTERTD 266
R AQ EV D
Sbjct: 176 RHHAQVEDLEVKVDKD 191
>gi|388565620|ref|ZP_10152105.1| rieske (2fe-2S) iron-sulfur domain protein [Hydrogenophaga sp. PBC]
gi|388267188|gb|EIK92693.1| rieske (2fe-2S) iron-sulfur domain protein [Hydrogenophaga sp. PBC]
Length = 366
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 130/343 (37%), Gaps = 51/343 (14%)
Query: 98 LGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCV 157
L TV +Q++VLY+ +G L +D C HRL LS G+L + C YHG + EG+C
Sbjct: 27 LARTVCNQKLVLYRQTDGRLAALEDACWHRLLPLSLGRLEGDEVVCGYHGLVYNAEGRCT 86
Query: 158 KIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQDVST 217
+P+ I +ACVR + V E VW+W + +P P +
Sbjct: 87 ---HMPSQETINPAACVRRFPVAEKHRFVWIWPGDPALADEALIPDLHWNHDPEWAGDGK 143
Query: 218 IHELPYDHSILLENLMDPAHIPISHDR-----------------------TDWTAKREDA 254
+ + D+ ++++NLMD H H T W E
Sbjct: 144 MIRVKCDYRLVVDNLMDLTHETFVHGSSIGNRAVAEAPFVATHGERTATVTRWMENIE-- 201
Query: 255 QPLGFEVTERTDRGFAG---RWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTG------ 305
P + R RG+ G RW +RFEAPC + + + + TG
Sbjct: 202 APPFWAGQIRQARGYTGPVDRW---------QIIRFEAPCTVAIDVGVAPTGTGALPRDG 252
Query: 306 --EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLS 363
H G+ L T + + + + + L + + + +F +D L
Sbjct: 253 GDRSHGVNGMVLNTITPETDNTCLYFWAFARNYCLGEQRLTHQLREGVAGIFREDELVLE 312
Query: 364 SQNEVLMKETVPTKELY-LNLRSSDTWVAEYRKWMDKVGHGMP 405
+Q + + E P Y LN+ + W M + G P
Sbjct: 313 AQQKAI--EEHPDHRFYNLNIDAGAMWARRLIDRMVEAERGTP 353
>gi|399021375|ref|ZP_10723485.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
gi|398092183|gb|EJL82601.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
Length = 350
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 5/160 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T D D PLG + ++IV Y+ G++ +D CPHR A LS G + DG+L
Sbjct: 7 WY-VACTPDEIADKPLGRQICGEKIVFYRGAEGKVAAVEDFCPHRGAPLSLGFVRDGQLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +GK + +P ++ C+R++ V E G +WVW +K +P ++
Sbjct: 66 CGYHGLEMGCDGKVISMP----GQRVRGFPCIRSFPVVERYGFIWVWPGEKELADPAQIH 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E P + ++ + ++ ++++NLMD H H
Sbjct: 122 HLEWADNPEWAYGGGLYHINCEYRLMIDNLMDLTHETYVH 161
>gi|411003190|ref|ZP_11379519.1| oxygenase Rieske iron-sulfur component [Streptomyces globisporus
C-1027]
Length = 379
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 87/162 (53%), Gaps = 15/162 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR-L 141
WYP+ L++ V + ++I LY+ +G + +DRC HR LS G ++DG L
Sbjct: 37 WYPVALSRSVRKEGVAAAVFAGERIALYRARSGAVHALEDRCAHRQVPLSMG-VVDGETL 95
Query: 142 ECLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YH W + G+G+ +IP L DA+ PR VR Y V+E+ G+V+V+ P +P+K
Sbjct: 96 RCCYHAWAYRGDGRISQIPYLAKGDARPPRG--VRAYPVREAYGLVFVF-----PGDPEK 148
Query: 201 -----LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 237
LP FA P ++ ++ + +S L ENL+D H
Sbjct: 149 AAVTPLPDVPAFASPRYRTMTFSRTVRCHYSFLHENLLDMNH 190
>gi|443470962|ref|ZP_21061036.1| Vanillate O-demethylase oxygenase subunit [Pseudomonas
pseudoalcaligenes KF707]
gi|442900822|gb|ELS26865.1| Vanillate O-demethylase oxygenase subunit [Pseudomonas
pseudoalcaligenes KF707]
Length = 339
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 86/187 (45%), Gaps = 5/187 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + D P+ L ++ L++D +G L +D CPHR A LS G + RL+
Sbjct: 19 WYPICPVGFIAD-RPVSLRRLGYKLALWRDTDGTLHALEDHCPHRGAPLSRGVNLGDRLQ 77
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +G ++P P K+ S R + V E+ G VW++ S + L
Sbjct: 78 CPYHGVEVRCDGVTTRVPGSPG-CKLEGSQATRYFHVTEAAGAVWLYNSAQNVEEAPPLV 136
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
E P F E D+ +L+N+MDP H H ++ ++ E VT
Sbjct: 137 LPEQLTDPAFSHFLCYAEWRGDYRYVLDNVMDPMHGTYLHKQSHSMSEGESQAKF---VT 193
Query: 263 ERTDRGF 269
TD GF
Sbjct: 194 RDTDTGF 200
>gi|428769301|ref|YP_007161091.1| Rieske (2Fe-2S) iron-sulfur domain-containing protein
[Cyanobacterium aponinum PCC 10605]
gi|428683580|gb|AFZ53047.1| Rieske (2Fe-2S) iron-sulfur domain protein [Cyanobacterium aponinum
PCC 10605]
Length = 340
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 17/298 (5%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + L+K + + L V + + +++ NG+ QDRC HR ++LS G++ G L+
Sbjct: 7 WYVVALSKQLKSNQVLSRQVLGEWLAIFRTKNGKPVALQDRCTHRNSRLSCGKVQQGYLQ 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPP--NPDK 200
C YHGW ++ G V IP + K S + Y E G ++V ++++ P +P
Sbjct: 67 CPYHGWVYDESGGVVSIPSEGENFKPRASLKAKQYHTCEQDGFIYVCLTEEIKPQFSPFS 126
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
+P+++ +PG+ V +H + + EN +D H H ++ Q L
Sbjct: 127 MPYYQ---QPGWHYVRVVHRFNNNVTNCAENFIDIPHTVSVHPG---IFRKSYQQKLEMT 180
Query: 261 VTERTDRGFAGRWGKEKDEPLPNFLRFEAPC---VLQNNRELVDSKTGEKHYFT---GLF 314
VT RT + E D L + RF P + ++R + + T ++ F LF
Sbjct: 181 VT-RTQGTVIANYHNE-DTNLGWWTRFLNPSHHKIYHSDRFFMPNITSVEYQFAPRRHLF 238
Query: 315 LC-RPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMK 371
+ + + ++ +V AT + + A ++ QD+ L Q EV+ K
Sbjct: 239 ITSQSVPETETSTLVYTDATFSYGIWSYLATPFVSYTAKRIIGQDVKILQIQQEVIEK 296
>gi|388544432|ref|ZP_10147720.1| Rieske 2Fe-2S family protein [Pseudomonas sp. M47T1]
gi|388277615|gb|EIK97189.1| Rieske 2Fe-2S family protein [Pseudomonas sp. M47T1]
Length = 344
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 91/177 (51%), Gaps = 11/177 (6%)
Query: 95 DAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEG 154
D P T+ +++VL+ G + DRC HR A+LS+G + DG++ C YHGW+++ G
Sbjct: 24 DGPHPFTLLGERLVLFMGNQGPV-ALADRCCHRTAQLSKGWVEDGQIVCGYHGWRYDKSG 82
Query: 155 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQD 214
CV IPQL +A IP A V Y +E G VWV + + PD FE + P ++
Sbjct: 83 ACVCIPQLADNAPIPNGARVPAYRCEEKYGYVWVCLGEPLQGIPD----FEEDSSPAYRR 138
Query: 215 VSTIHELPYDHSIL--LENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGF 269
+ +E ++ S L +EN D +H H QP +++ ++T+ GF
Sbjct: 139 IFQFYER-WNTSPLRFMENSFDNSHFSFVHKAN--FGMLNQPQPSSYQL-QQTEWGF 191
>gi|291445392|ref|ZP_06584782.1| vanillate O-demethylase oxygenase subunit [Streptomyces roseosporus
NRRL 15998]
gi|291348339|gb|EFE75243.1| vanillate O-demethylase oxygenase subunit [Streptomyces roseosporus
NRRL 15998]
Length = 374
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 15/162 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR-L 141
WYP+ L++ V + ++I LY+ +G + +DRC HR LS G ++DG L
Sbjct: 48 WYPVALSRSVRKEGVAAAVFAGERIALYRAKSGAVHALEDRCAHRQVPLSMG-VVDGETL 106
Query: 142 ECLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YH W + G+G+ +IP L DA+ PR VR Y V+E+ G+V+V+ P +P+K
Sbjct: 107 RCCYHAWAYRGDGRISQIPYLAKGDARPPRG--VRAYPVREAYGLVFVF-----PGDPEK 159
Query: 201 -----LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 237
LP +A P ++ ++ + +S L ENL+D H
Sbjct: 160 AEVTPLPDVPAYASPRYRTMTFSRTVRCHYSFLHENLLDMNH 201
>gi|423207584|ref|ZP_17194140.1| hypothetical protein HMPREF1168_03775 [Aeromonas veronii AMC34]
gi|404620651|gb|EKB17548.1| hypothetical protein HMPREF1168_03775 [Aeromonas veronii AMC34]
Length = 344
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 2/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ + +V + P+G+T + IVL++D G + +DRCPHR A+LS G + R+
Sbjct: 19 WYPVVSSWEVSSN-PVGITRLGEHIVLWRDTKGNVNALEDRCPHRGARLSLGWNLGDRVA 77
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G G +P + A + S C+R+Y V E G +++W + P +L
Sbjct: 78 CWYHGVEVNGAGVVTDVPAVDA-CPMTGSKCLRSYPVIEKHGAIFLWFGLEAESTPAELV 136
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E + + ++ ++N+MDP H H
Sbjct: 137 LPEQLESEEWSHFLCQADWAVNYRYAVDNVMDPMHGSYLH 176
>gi|399076290|ref|ZP_10751943.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
gi|398037623|gb|EJL30808.1| ring-hydroxylating dioxygenase, large terminal subunit [Caulobacter
sp. AP07]
Length = 352
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 74/160 (46%), Gaps = 4/160 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T ++ APL V D IVL++ G+ +RCPHR A LS GQ+ +
Sbjct: 9 WYMVAWTDEL-TAAPLARRVLDMPIVLFRTATGQAAALINRCPHRFAPLSRGQVQGEMIR 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F GKCV P +P A VR++ V E +W+W Q +P +P
Sbjct: 68 CGYHGLGFSAAGKCVDS---PFGLAVPPGAEVRSFPVVERDACLWLWPGQPELADPGSIP 124
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
F P ++ V + ++ +NLMD H H
Sbjct: 125 DFGYHLDPAYRVVKGYSAVGAHFEVITDNLMDLTHTRYLH 164
>gi|91782291|ref|YP_557497.1| vanillate O-demethylase oxygenase [Burkholderia xenovorans LB400]
gi|91686245|gb|ABE29445.1| Vanillate O-demethylase oxygenase subunit [Burkholderia xenovorans
LB400]
Length = 345
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + DV L T ++ +VL++ +G L DRC HR LSEG + +
Sbjct: 7 WYVAAFSADVKPGKCLARTFLNEPVVLFRTASGSLGALIDRCSHRAMPLSEGHVDGDIIR 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F G C I P +IP +A VR+Y V E G++W+WM + P+K
Sbjct: 67 CPYHGLEFNAAGVCAHI---PGQERIPAAANVRSYPVSERDGLIWIWMGE-----PEKAD 118
Query: 203 WFENFARPGFQDVSTIHELPYDH-----SILLENLMDPAHIPISHDRT 245
+ P +D Y H +L++N++D H+ H T
Sbjct: 119 LRSIMSNPEHRDPGWSWRPYYMHVNSNWQLLVDNILDLTHVAYIHANT 166
>gi|399154477|ref|ZP_10754544.1| Rieske family iron-sulfur cluster-binding protein [gamma
proteobacterium SCGC AAA007-O20]
Length = 346
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WYP+ + +V +PLG+ V +++VL++ +G++ C +D+CPHR A LS G+L +G +
Sbjct: 21 QWYPVAKSVEVKSISPLGIEVLGEKLVLWRGDSGKVHCIKDQCPHRGAPLSFGRLHEGHI 80
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHG GEG V +P + + K VR +EV E ++++M ++
Sbjct: 81 SCRYHGIVVSGEGVVVTVPAM-KNCKFEGQKIVRAFEVTEIYDAIFIYMPSAENEKAPRM 139
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ + F + ++ L+NL DP H H
Sbjct: 140 VFPKEFLSDSWSGFLCTAVWKTNYRYALDNLADPMHGSYLH 180
>gi|148555930|ref|YP_001263512.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148501120|gb|ABQ69374.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 361
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++ ++ A + + D + +++ G DRCPHRL LSEG + L
Sbjct: 7 WYVAAMSHEIAPGAVISRMICDVPMAIFRSLGGVASILLDRCPHRLYPLSEGTVEAHGLR 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG F G+G C +I P+ ++IP +ACV Y +ES G++WVW LP
Sbjct: 67 CAYHGLVFAGDGGCREI---PSQSEIPANACVTAYPARESHGLIWVWPGDAALAASTPLP 123
Query: 203 WFEN----FARPGFQ--------DVSTIHELPYDHSILL--ENLMDPAHIPISHDRT 245
FE A F V+ H + D + +L +NL+D H H +T
Sbjct: 124 AFETGEGYLAGLDFSCLDPSSLWGVAGPHVIHLDANYMLAVDNLLDLTHTAFVHAKT 180
>gi|445427122|ref|ZP_21437781.1| Rieske [2Fe-2S] domain protein [Acinetobacter sp. WC-743]
gi|444751967|gb|ELW76661.1| Rieske [2Fe-2S] domain protein [Acinetobacter sp. WC-743]
Length = 355
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 87/164 (53%), Gaps = 6/164 (3%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDDQGQVHALEDRCPHRGARLSLGWNLGNR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVW--MSQKTPPNP 198
+ C YHG + +G +P + + + ++CV++Y V E G +++W + K P P
Sbjct: 80 VACWYHGVEVRHDGVVEDVPAV-HECPMKGTSCVKSYPVIEQHGAIFMWFGIDAKEPAKP 138
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ P E A + + +H ++N+MDP H H
Sbjct: 139 LEFP--EQLASEAWSSFLCQADWKVNHQYAIDNVMDPMHGSYLH 180
>gi|398825500|ref|ZP_10583791.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. YR681]
gi|398223368|gb|EJN09713.1| ring-hydroxylating dioxygenase, large terminal subunit
[Bradyrhizobium sp. YR681]
Length = 348
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 140/343 (40%), Gaps = 46/343 (13%)
Query: 80 TEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG 139
EW+ + +++V + A + + + I+L++ +GE+ ++D C HR A+LS G + DG
Sbjct: 18 VNEWHVVRRSEEVAEGAIVPARLLGEDIILWRH-DGEVHAWKDYCRHRGARLSLGWVKDG 76
Query: 140 RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 199
+ C YHGW++ +G C + P P R+A R + V E G +WV M P
Sbjct: 77 CVVCPYHGWEYGSDGACRRYPAHPTTRPTSRAAAFRHHAV-EQYGYIWVCMGNPVAAIP- 134
Query: 200 KLPWFENFARPGFQDVSTIHELPYDHSI----LLENLMDPAHIPISHDRTDWTAKREDAQ 255
K P +E+ + PY ++ +EN +DPAH P H + +D
Sbjct: 135 KFPVWED------ATYRKVQAGPYYYNANALRAVENFLDPAHFPFVH--ANLNGNPDDPD 186
Query: 256 PLGFEVTERTDRGFAGR-------WGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKH 308
L TD G +G + P+ R+ + + +TGE
Sbjct: 187 ELVDYDVALTDEGLCTSEITLFQPYGDHRGIPINAVYRYYC---FRPTTAYFNKQTGEVE 243
Query: 309 YFTGLFLCRPTGQGKSMLIVR------FGATKRSPLAKLFPKWYFHQNASKVFEQDMGFL 362
F P +L + F ++++ KV+EQD +
Sbjct: 244 RFCTFLAVTPVDLENCVLHLTAAVNYGFDVGAEQIVSRM----------DKVYEQDRVIV 293
Query: 363 SSQNEVLMKETVPTKELYLNLRSSDTWVAEYRKWMDKV-GHGM 404
SQ + P E++L SD EYR+W+ + G G+
Sbjct: 294 ESQRPKTLP-LHPKDEIHLR---SDLLGVEYRRWIRALAGEGL 332
>gi|258543294|ref|YP_003188727.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-01]
gi|384043214|ref|YP_005481958.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-12]
gi|384051731|ref|YP_005478794.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-03]
gi|384054838|ref|YP_005487932.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-07]
gi|384058073|ref|YP_005490740.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-22]
gi|384060714|ref|YP_005499842.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-26]
gi|384064006|ref|YP_005484648.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-32]
gi|384120017|ref|YP_005502641.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256634372|dbj|BAI00348.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-01]
gi|256637430|dbj|BAI03399.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-03]
gi|256640482|dbj|BAI06444.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-07]
gi|256643539|dbj|BAI09494.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-22]
gi|256646594|dbj|BAI12542.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-26]
gi|256649647|dbj|BAI15588.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-32]
gi|256652635|dbj|BAI18569.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-01-42C]
gi|256655691|dbj|BAI21618.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
IFO 3283-12]
Length = 351
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 14/213 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ L +++ +D PLG+T+ D +V+Y+ G ++ D CPHR LS G+ +
Sbjct: 32 WHPIALVREL-EDKPLGVTLLDAPLVIYRAGE-DIVVADDLCPHRGVPLSMGKGNGQTVA 89
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-KL 201
C YHG+QF +G+CV+IP P D+ IP +RTY V E G++W + + N D +
Sbjct: 90 CAYHGFQFGHQGQCVRIPAHP-DSAIPSRLNLRTYPVVERYGLIWTCLRPQD--NEDISI 146
Query: 202 PWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISH-------DRTDWTAKRED 253
P ++ GFQ ++ ++ +E +D AH H D A
Sbjct: 147 PSMPHWDEAGFQQINCPWIDIAGFAGRQVEGFIDVAHFAFVHTETFADPDNPVVPAYMPK 206
Query: 254 AQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLR 286
P GFE R++ G E+ P +LR
Sbjct: 207 MTPYGFEAEYRSNVGNYPIGQSERGRPDFEWLR 239
>gi|423095041|ref|ZP_17082837.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
gi|397886188|gb|EJL02671.1| vanillate monooxygenase family protein [Pseudomonas fluorescens
Q2-87]
Length = 265
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +V A T+ ++ +V ++D +G + DRCPHR A L G L +
Sbjct: 8 WYAAAWGSEVKVGALFQRTLLNEPVVFFRDSHGAAQAIADRCPHRFAPLGMGVLKGDAVR 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG +F+G G CV P D IPR+A V+ Y + E ++W+WM + + +P
Sbjct: 68 CPYHGLEFDGSGSCVHYPH--GDGAIPRAAKVKAYPLVERYSLLWIWMGDMSLADATLIP 125
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
F + ++ + +N+MD +HI H T
Sbjct: 126 DFSCMDGDHWYVGKRYLHAKANYVLETDNIMDLSHIEFLHPST 168
>gi|187918963|ref|YP_001887994.1| Rieske (2Fe-2S) domain-containing protein [Burkholderia
phytofirmans PsJN]
gi|187717401|gb|ACD18624.1| Rieske (2Fe-2S) domain protein [Burkholderia phytofirmans PsJN]
Length = 371
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 142/329 (43%), Gaps = 48/329 (14%)
Query: 95 DAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDG-RLECLYHGWQFEGE 153
D P+G T+ ++ IV+ + NGE+ + D CPHR +LS G + DG RLEC YHGWQF+ E
Sbjct: 45 DKPVGFTLLEKDIVIVR-LNGEISVFDDICPHRGTRLSLGHVRDGCRLECPYHGWQFDQE 103
Query: 154 GKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ 213
G+ PQ P A R A R Y E G+VW + K P P LP + + P F
Sbjct: 104 GELTLAPQRPDLAGQLR-ARTRKYLSVEKYGMVWACLEDK-PHFP--LPDYPVWDNPEFH 159
Query: 214 DVSTIHELPYDHSI--LLENLMDPAHIPISHD--RTDWTA-------------KREDAQP 256
V+ +D S +EN D +H I HD D T K E+ Q
Sbjct: 160 YVAVSPAEDWDCSAPRRVENYTDYSHFAILHDGFLADRTVPQVPPHDVFRNGNKLENVQG 219
Query: 257 LGFEVTERTDRGFAGRWGKEKDEPLPNFLR--------FEAPCVLQNNRELVDSKTGEKH 308
G V D + WG KD+P +LR CV + + G ++
Sbjct: 220 EGAWVRVPID---SAAWGG-KDKPADPYLRMYFKWRVFMPLTCVYD-----ISFQDGNRY 270
Query: 309 YFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEV 368
+ LF P G K+ F + R K +++QD + SQ
Sbjct: 271 HL--LFHPTPMGPRKTR---NFTVSHRDFGDKAKANEELGDFVKLIYDQDRWVVESQRPE 325
Query: 369 LMKETVPTKELYLNLRSSDTWVAEYRKWM 397
+ E + TKE++ ++ D + EYR W+
Sbjct: 326 ELPEDL-TKEMH--VKGVDKYSVEYRMWL 351
>gi|17548443|ref|NP_521783.1| vanillate O-demethylase oxygenase [Ralstonia solanacearum GMI1000]
gi|17430690|emb|CAD17373.1| probable vanillate o-demethylase oxygenase subunit oxidoreductase
protein [Ralstonia solanacearum GMI1000]
Length = 342
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T D D PLG + +++V Y+ G++ +D CPHR A LS G + DG L
Sbjct: 7 WY-VACTPDEIADKPLGRRICGERMVFYRGQEGKVAALEDFCPHRGAPLSLGFVRDGHLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +GKC +P ++ C+R + V E G +WVW +P ++
Sbjct: 66 CGYHGLTMKADGKCASMP----GQRVGGFPCIRQFPVVERYGFIWVWPGDPEQADPARIH 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
E + ++ + D+ ++++NLMD H H + + E+A P
Sbjct: 122 HLEWAESEAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAP 175
>gi|347529646|ref|YP_004836394.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
gi|345138328|dbj|BAK67937.1| putative iron-sulfur protein [Sphingobium sp. SYK-6]
Length = 350
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +D+ D P +T+ ++IV+++ +G + +DRC HRLA LS G+ RL
Sbjct: 8 WYVAGWAQDLKADTPFAITILGERIVIWRTASGAIHALEDRCVHRLAPLSLGRCEGERLR 67
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C+YHG F+ +G+ V ++P +IP A VR Y V +WVWM + +P
Sbjct: 68 CMYHGLLFDPDGRVV---EMPGQDRIPPQARVRHYPVVARHSWLWVWMGDPARADESLIP 124
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
P + + + ++ +NL+D +H+ H
Sbjct: 125 PAVGLDHPDYILGHGQLDYAAEARLINDNLLDFSHLTFVH 164
>gi|73539601|ref|YP_299968.1| Rieske (2Fe-2S) domain-containing protein [Ralstonia eutropha
JMP134]
gi|72122938|gb|AAZ65124.1| phthalate 4,5-dioxygenase, oxygenase subunit [Ralstonia eutropha
JMP134]
Length = 417
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 83 WYPLYLTKDV--PDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
W P L ++ P P+ + + + +V ++D +G++ ++CPHR A L+ G DG
Sbjct: 27 WIPALLASEIAEPGGKPVRVRLLGEDLVAFRDTDGKVGLLDEQCPHRRASLALGDNSDGG 86
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
L CLYHGW+F +G C+ P P+ + + Y +E+ GV+W +M +
Sbjct: 87 LRCLYHGWKFATDGTCLDTPTEPSGSAFCSRIRAQAYPTREAGGVIWTYMGPAA--EEPQ 144
Query: 201 LPWFENFARPGFQDV--STIHELPYDHSILLENLMDPAHIPISHDRTDWTA 249
P FE + P V + + Y ++ E +D AH + H W+A
Sbjct: 145 FPKFEWLSYPAVNAVPFKVLEDCNYAQAV--EGTIDSAHAGVLHREQPWSA 193
>gi|75427753|sp|P94679.1|TSAM1_COMTE RecName: Full=Toluene-4-sulfonate monooxygenase system iron-sulfur
subunit TsaM1; AltName: Full=TS methylmonooxygenase
system, oxygenase M; AltName: Full=Toluenesulfonate
methyl-monooxygenase oxygenase component TsaM1
gi|1790867|gb|AAC44804.1| toluenesulfonate methyl-monooxygenase oxygenase component TsaM
[Comamonas testosteroni]
Length = 347
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 3/196 (1%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY ++P + T+ ++ ++LY+D G + ++RC HR A L G+ +
Sbjct: 7 WYVAAWDTEIPAEGLFHRTLLNEPVLLYRDTQGRVVALENRCCHRSAPLHIGRQEGDCVR 66
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
CLYHG +F G CV+I P +IP C+++Y V E +VW+WM NPD +
Sbjct: 67 CLYHGLKFNPSGACVEI---PGQEQIPPKTCIKSYPVVERNRLVWIWMGDPARANPDDIV 123
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
+ P ++ ++ ++++NL+D H+ H T T +P+ T
Sbjct: 124 DYFWHDSPEWRMKPGYIHYQANYKLIVDNLLDFTHLAWVHPTTLGTDSAASLKPVIERDT 183
Query: 263 ERTDRGFAGRWGKEKD 278
T + RW D
Sbjct: 184 TGTGKLTITRWYLNDD 199
>gi|255597961|ref|XP_002536894.1| oxidoreductase, putative [Ricinus communis]
gi|223518190|gb|EEF25490.1| oxidoreductase, putative [Ricinus communis]
Length = 293
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 20/184 (10%)
Query: 71 ERQVADYD--WTEEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRL 128
E++VA D WY ++P + T+ + +VLY+ +G DRC HR
Sbjct: 14 EKKVAPEDRFIRNSWYVALWADELPAGKLVHQTILGEPVVLYRKEDGAPAAIVDRCSHRF 73
Query: 129 AKLSEGQLIDG-RLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVW 187
A LS G+L+ G R++C YHG +F+ GKCVK P + IP ++ +R++ V E +W
Sbjct: 74 APLSMGKLLPGNRIQCPYHGLEFDQTGKCVKNPH--GNCTIPAASHLRSFPVIEKYKFIW 131
Query: 188 VWMSQKTPPNPDKLPWFE--------NFARPGFQDVSTIHELPYDHSILLENLMDPAHIP 239
+WM T +P K+P + + G+ ++ +EL +++NL+D +H
Sbjct: 132 IWMGD-TQADPAKIPDYSCLDTAPAAHITDTGYLNIKAHYEL------IVDNLLDLSHTA 184
Query: 240 ISHD 243
H+
Sbjct: 185 YVHE 188
>gi|323135827|ref|ZP_08070910.1| Rieske (2Fe-2S) iron-sulfur domain [Methylocystis sp. ATCC 49242]
gi|322398918|gb|EFY01437.1| Rieske (2Fe-2S) iron-sulfur domain [Methylocystis sp. ATCC 49242]
Length = 328
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 17/274 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W + L +D+ PL + V ++IV ++D +G DRCPHR LS G++ G +E
Sbjct: 9 WTIVGLARDLKPGRPLPMRVAGERIVFFRDASGNAAALLDRCPHRGVALSLGRVDRGVIE 68
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C +HGW+F+G G P P DAK + + +ES G++W++ T +P+ P
Sbjct: 69 CPFHGWRFDGSGANCGAPFNP-DAKRENLGAI-SLPARESGGLLWLY----TGFSPEDEP 122
Query: 203 WF-ENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEV 261
+ FA PG + + ++EN++D H+P H RT RE +
Sbjct: 123 ALSDTFAAPGLALCAQSVLWRAHWTRVMENMLDMPHLPFVHRRTIGAGLRELVEKRMDVY 182
Query: 262 TERTDRGFAGRWGKEKDE-PLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRPTG 320
E DR + R D P P L + P V+ EL G+ F + C P
Sbjct: 183 WE--DRPYGARVTNAVDSVPRPGALEYRFPNVM----ELFIDPPGK--LFRLMVACVPED 234
Query: 321 QGKSMLI-VRFGATKRSPLAKLFPKWYFHQNASK 353
+ + LI + RSPL +W + A++
Sbjct: 235 EETTRLILLTMRDFARSPLLHPVFRWMNRRIANE 268
>gi|319651032|ref|ZP_08005167.1| hypothetical protein HMPREF1013_01777 [Bacillus sp. 2_A_57_CT2]
gi|317397388|gb|EFV78091.1| hypothetical protein HMPREF1013_01777 [Bacillus sp. 2_A_57_CT2]
Length = 336
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 147/327 (44%), Gaps = 25/327 (7%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
EW+P+ +++ +D P + V +++ ++++ G + ++D C HR A LS G++ +G L
Sbjct: 9 EWHPVCKAEELLED-PKQVFVLGERVAIFRNEKG-VHAFKDLCIHRGAALSLGKVKNGNL 66
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YH W+++ G C KIP LP+ IP A Y +E G++WV + + +P L
Sbjct: 67 VCAYHAWEYDCTGACEKIPALPSGRAIPSKARATVYHCEEYLGLIWVNLGE----DPAPL 122
Query: 202 PWFENFARPGFQD-VSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
F ++ G++ + +E+ + ++EN +D +H+ H+ + A+ + ++
Sbjct: 123 VSFPEYSMEGYRTAICGPYEVKANAPRIIENFLDVSHLMFVHE--GLLGDEDHAEVVDYK 180
Query: 261 VTERTDRGFAGRWGKEKDEP----LPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLC 316
V +R + + P + + + + G T L
Sbjct: 181 VEFVDNRLITSKIPVYQPNPDGRSKGGYADYVYEILNPTTARFTKTTEGSDDELTILLAV 240
Query: 317 RPTG--QGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETV 374
Q K+ +++ T+ L P F + +F QD+ + SQ L+ +
Sbjct: 241 NQEDHEQAKAFMLL----TRNYDLD--MPDEPFIEFQDTIFYQDLDIVQSQKPELLPLDL 294
Query: 375 PTKELYLNLRSSDTWVAEYRKWMDKVG 401
EL+L SD YRKW++++G
Sbjct: 295 -QAELHL---KSDALTIAYRKWLNELG 317
>gi|347528297|ref|YP_004835044.1| phthalate 4,5-dioxygenase [Sphingobium sp. SYK-6]
gi|345136978|dbj|BAK66587.1| phthalate 4,5-dioxygenase [Sphingobium sp. SYK-6]
Length = 423
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 83 WYPLYLTKDVP--DDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
W P L ++P D P+ + + + +V ++D G + + CPHR + L+ G +
Sbjct: 27 WMPALLESELPEKDGKPVRIRLMGEDLVAFRDSEGRIGLLDEHCPHRGSSLALGVNGECG 86
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQK--TPPNP 198
L CL+HGW+F+ G+C P P A + ++ V+ Y + + G++W +M K PP P
Sbjct: 87 LRCLFHGWKFDVTGQCTDTPAEPEGATLAKAMRVKAYPTRVAGGMIWTYMGPKEAEPPFP 146
Query: 199 DKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDW 247
PWF + + I+E Y +I E +D AH + H + W
Sbjct: 147 -HFPWF-DMPEGHCEAFKVIYECNYAQAI--EGAIDSAHAGVLHRESPW 191
>gi|316933098|ref|YP_004108080.1| Rieske (2Fe-2S) iron-sulfur domain [Rhodopseudomonas palustris
DX-1]
gi|315600812|gb|ADU43347.1| Rieske (2Fe-2S) iron-sulfur domain [Rhodopseudomonas palustris
DX-1]
Length = 347
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 133/324 (41%), Gaps = 39/324 (12%)
Query: 101 TVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 160
T+ + +V+Y+ +G + +D C HRL LS+G+L + C YHG +F +G+C
Sbjct: 26 TICGKHVVMYRKADGSVAALEDACWHRLVPLSKGRLEGDTVVCGYHGLKFNPQGRCTF-- 83
Query: 161 QLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP---WFENFARPGFQDVST 217
+P+ I SACVR+Y V E VW+WM +P +P W ++ A G D T
Sbjct: 84 -MPSQETINPSACVRSYPVVERHRFVWLWMGDPVLADPALVPDMHWNDDPAWAG--DGKT 140
Query: 218 IHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKEK 277
IH D ++++NLMD H H + E F+VT RW
Sbjct: 141 IHA-KCDWRLVVDNLMDLTHETYVHGS---SIGNEAVAEAPFDVTHGDRTVTVTRW-MHG 195
Query: 278 DEPLP---------------NFLRFEAPCVLQNNRELVDSKTG-----EKHYFTGLFLCR 317
EP P +RFEAP + + + + TG G L
Sbjct: 196 IEPPPFWAAQLGKPGLVDRWQIIRFEAPGTVTIDVGVAPAGTGAPEGDRSQGVNGYVLNT 255
Query: 318 PTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTK 377
T + + + + L + S +F +D L +Q +++ P +
Sbjct: 256 MTPETDTTCHYFWAFVRNYRLGDQRLTTEIREGVSGIFREDEIILEAQQRAMLEN--PDR 313
Query: 378 ELY-LNLRSSDTWVAEYRKWMDKV 400
Y LN+ + W RK +D++
Sbjct: 314 VFYNLNIDAGAMW---SRKLIDRM 334
>gi|264680321|ref|YP_003280231.1| vanillate monooxygenase [Comamonas testosteroni CNB-2]
gi|262210837|gb|ACY34935.1| vanillate monooxygenase [Comamonas testosteroni CNB-2]
Length = 359
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 14/205 (6%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++WY ++ D P+ T+ Q +VL++ +G + +DRC HR LS G +
Sbjct: 18 DQWYVAGFAWEL-KDQPVARTLLGQPVVLFRTEDGRVAALEDRCCHRELPLSCGTVEAAG 76
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
L C YHG F EG+C++I P +IP ACV+++E++E ++W+WM PD
Sbjct: 77 LRCGYHGLLFSHEGRCLEI---PGQERIPAKACVKSFELRERDQILWIWMGA----TPDS 129
Query: 201 LPWFENFA-----RPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQ 255
+P E A P ++ ++ + ++ +NL+D +H+ H +T R
Sbjct: 130 VPGTEPPAYAVHSDPQYRFGGGVYHYDAPYQLIHDNLLDLSHLGYVHLKTIGGNARVHMN 189
Query: 256 PLGFEVTERTDRGFAGRWGKEKDEP 280
+V++ D RW + D P
Sbjct: 190 -ADLKVSQDGDSVKVVRWMPDSDPP 213
>gi|421849246|ref|ZP_16282229.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
NBRC 101655]
gi|371460053|dbj|GAB27432.1| vanillate O-demethylase oxygenase subunit [Acetobacter pasteurianus
NBRC 101655]
Length = 338
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 14/213 (6%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ L +++ +D PLG+T+ D +V+Y+ G ++ D CPHR LS G+ +
Sbjct: 19 WHPIALVREL-EDKPLGVTLLDAPLVIYRAGE-DIVVADDLCPHRGVPLSMGKGNGQTVA 76
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPD-KL 201
C YHG+QF +G+CV+IP P D+ IP +RTY V E G++W + + N D +
Sbjct: 77 CAYHGFQFGHQGQCVRIPAHP-DSAIPSRLNLRTYPVVERYGLIWTCLRPQD--NEDISI 133
Query: 202 PWFENFARPGFQDVSTI-HELPYDHSILLENLMDPAHIPISH-------DRTDWTAKRED 253
P ++ GFQ ++ ++ +E +D AH H D A
Sbjct: 134 PSMPHWDEAGFQQINCPWIDIAGFAGRQVEGFIDVAHFAFVHTETFADPDNPVVPAYMPK 193
Query: 254 AQPLGFEVTERTDRGFAGRWGKEKDEPLPNFLR 286
P GFE R++ G E+ P +LR
Sbjct: 194 MTPYGFEAEYRSNVGNYPIGQSERGRPDFEWLR 226
>gi|409400349|ref|ZP_11250444.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Acidocella sp. MX-AZ02]
gi|409130634|gb|EKN00384.1| vanillate O-demethylase oxygenase subunit oxidoreductase
[Acidocella sp. MX-AZ02]
Length = 342
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 5/160 (3%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + ++ + PLG T+ +++V Y+ G++ +D CPHR A LS G + DG+L
Sbjct: 7 WYVAAMPDELAE-TPLGRTICGEKMVFYRGAGGKVAAVEDFCPHRGAPLSLGYVEDGKLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG EGK +++P ++ +++Y V+E G +WVW K +P +
Sbjct: 66 CGYHGLAMGCEGKALEMP----GQRVNGFPAIKSYAVEERYGFIWVWPGDKAKADPATIH 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
E P + ++ + D+ ++++NLMD H H
Sbjct: 122 HLEWAVNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVH 161
>gi|374316567|ref|YP_005062995.1| ring-hydroxylating dioxygenase, large terminal subunit
[Sphaerochaeta pleomorpha str. Grapes]
gi|359352211|gb|AEV29985.1| ring-hydroxylating dioxygenase, large terminal subunit
[Sphaerochaeta pleomorpha str. Grapes]
Length = 322
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 14/171 (8%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+WY + +++V A + + +VL++D G+L C D+CPHR A LS G+L +
Sbjct: 5 QWYAILPSREVKRGALYAVKRVNLDLVLFRDAEGKLGCVVDQCPHRGAALSAGKLAGSHV 64
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAK--IPRSACVRTYEVKESQGVVWVWMSQKTPPNPD 199
C +HG +F+ EG C +IP +K I R V+ Y V+E G++++W +
Sbjct: 65 RCPFHGLEFDTEGNCRRIPANGNASKEDISRYN-VKQYPVQELMGIIYLWFGESEKATAS 123
Query: 200 KLPWFEN-----FARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRT 245
+P+F + F+ F D H +S +EN +D H+PI H T
Sbjct: 124 -VPFFHDQIDNSFSYSEFPDHWNAH-----YSRCIENQLDVVHVPIVHYNT 168
>gi|239988406|ref|ZP_04709070.1| putative oxygenase Rieske iron-sulfur component [Streptomyces
roseosporus NRRL 11379]
Length = 363
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 15/162 (9%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR-L 141
WYP+ L++ V + ++I LY+ +G + +DRC HR LS G ++DG L
Sbjct: 37 WYPVALSRSVRKEGVAAAVFAGERIALYRAKSGAVHALEDRCAHRQVPLSMG-VVDGETL 95
Query: 142 ECLYHGWQFEGEGKCVKIPQLP-ADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
C YH W + G+G+ +IP L DA+ PR VR Y V+E+ G+V+V+ P +P+K
Sbjct: 96 RCCYHAWAYRGDGRISQIPYLAKGDARPPRG--VRAYPVREAYGLVFVF-----PGDPEK 148
Query: 201 -----LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAH 237
LP +A P ++ ++ + +S L ENL+D H
Sbjct: 149 AEVTPLPDVPAYASPRYRTMTFSRTVRCHYSFLHENLLDMNH 190
>gi|293608939|ref|ZP_06691242.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|375133843|ref|YP_004994493.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
calcoaceticus PHEA-2]
gi|292829512|gb|EFF87874.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325121288|gb|ADY80811.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
calcoaceticus PHEA-2]
Length = 355
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 5/189 (2%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG + +G +P + + + + C++ Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKNYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
L + E A + + +H ++N+MDP H H + A E +
Sbjct: 139 LEFPEQLASEEWSAFLCQADWKVNHQYAIDNVMDPMHGTYLHATSHSMADGERTAEMKHR 198
Query: 261 VTERTDRGF 269
TD GF
Sbjct: 199 T---TDNGF 204
>gi|239820364|ref|YP_002947549.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
gi|239805217|gb|ACS22283.1| Rieske (2Fe-2S) domain protein [Variovorax paradoxus S110]
Length = 352
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T + DD PLG + + +VLY+ G+ +D CPHR A LS G++++G+L
Sbjct: 7 WY-VACTGNEIDDKPLGRKICGENLVLYRAAEGKATALEDFCPHRGAPLSLGRVVEGKLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +GK V +P P +R++ V E G VW+W +P KL
Sbjct: 66 CGYHGLEMGCDGKTVAMPGQRVRGFPP----IRSFPVIERYGFVWIWPGDPALADPAKLH 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH---------DRTDWTAKRED 253
E P + + + D+ ++++NLMD H H D T T K E
Sbjct: 122 HLEWAESPDWAYGGGLFHIQCDYRLMIDNLMDLTHETYVHSTSIGQKEIDETPTTTKTEG 181
Query: 254 AQ 255
Q
Sbjct: 182 DQ 183
>gi|163795088|ref|ZP_02189056.1| oxidase-related protein [alpha proteobacterium BAL199]
gi|159179486|gb|EDP64015.1| oxidase-related protein [alpha proteobacterium BAL199]
Length = 357
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 126/306 (41%), Gaps = 31/306 (10%)
Query: 101 TVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIP 160
T+ + ++ +D +G + +D CPHR LS+G+ G +EC YHGW+F +G+C IP
Sbjct: 39 TLLGEPVLFGRDDSGAVFAMRDICPHRGIPLSDGRFDQGEVECCYHGWRFATDGRCTAIP 98
Query: 161 QLPADAKIPRSAC-VRTYEVKESQGVVWVWM------SQKTPPNPDKLPWFENFARPGFQ 213
L D + VRTY V + G +WV+M + + +P LP N Q
Sbjct: 99 SLTVDQTMDVDKIRVRTYPVVDRHGAIWVYMPADPRSTAEPAVSPPVLPEVTNRGPGMVQ 158
Query: 214 DVSTIHELPYDHSILLENLMDPAHIPISHDRTDW--------TAKREDAQPLGFEVTERT 265
+S + DH+++ LMDPAH P H W AKR LGF +
Sbjct: 159 RMSFPCHI--DHAVI--GLMDPAHGPFVHTSWWWRSRKSIHEKAKRFGPVDLGFAMLRHQ 214
Query: 266 DRGFAGRWGKEKDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTGLFLCRP-----TG 320
+ + P +RF P + + E+ +H GL P T
Sbjct: 215 PSSNSAAYRLLGGAPTTE-IRFHLPGIRVEDIEI------GRHRVCGLTAVTPIDATTTE 267
Query: 321 QGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMKETVPTKELY 380
+ M + P+ F + + Q+ V Q G + + +L+ ++ + Y
Sbjct: 268 IHQLMFWSIPWLSILKPVLAPFVRRFLAQDRDVVVRQQRGLVHNPTLMLINDSDVQAKWY 327
Query: 381 LNLRSS 386
L+ +
Sbjct: 328 FRLKKA 333
>gi|50084184|ref|YP_045694.1| vanillate O-demethylase oxygenase subunit [Acinetobacter sp. ADP1]
gi|49530160|emb|CAG67872.1| vanillate O-demethylase oxygenase subunit
(4-hydroxy-3-methoxybenzoate demethylase) [Acinetobacter
sp. ADP1]
Length = 358
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +++ D PLG T+ ++IV Y+ ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENKVAAVEDFCPHRGAPLSLGYVEDGHLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG EGK + +P ++ C + Y V E G +WVW +K+ N LP
Sbjct: 66 CGYHGLVMGCEGKTIAMPA----QRVGGFPCNKAYAVVEKYGFIWVWPGEKSLANEADLP 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPL 257
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPV 176
>gi|403731430|ref|ZP_10949288.1| vanillate demethylase oxygenase subunit [Gordonia rhizosphera NBRC
16068]
gi|403202209|dbj|GAB93619.1| vanillate demethylase oxygenase subunit [Gordonia rhizosphera NBRC
16068]
Length = 371
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 133/335 (39%), Gaps = 36/335 (10%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI--DGR 140
WY +V + T+ + + LY+ +G D C HRLA LS G L+ DG
Sbjct: 21 WYVAAWDHEVGRSEIVARTIAGKPMALYRTTDGRPVALADACWHRLAPLSMGTLVGSDG- 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
++C YHG QF G+C K +PA I SA V +Y V E +WVW T +P
Sbjct: 80 VQCPYHGLQFNSAGRCTK---MPAQETINPSAMVASYPVVERHRFIWVWPGDPTQADPST 136
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
+P P + ++ ++ ++L+NLMD H H + +++ F
Sbjct: 137 IPDMFQMDSPDWAGDGRTIDVQANYQLVLDNLMDLTHEEFVHSS---SIGQDELSESDFV 193
Query: 261 VT--ERT--------DRGFAGRWGKEKDEPLPNF---------LRFEAPCVLQNNRELVD 301
VT ERT D W K ++ P F + F+AP ++ + +
Sbjct: 194 VTHDERTVTVSRWMLDIEAPPFWRKNMNDKFPGFSGRVDRWQIIEFQAPSTIRIDVGVAR 253
Query: 302 SKTG-----EKHYFTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFE 356
+ TG G + T + + + + L + VF
Sbjct: 254 AGTGAPDGDRSQGVNGFVMNTITPIDERTALYFWAFMRDYRLDSQLITTQLREGVHGVFG 313
Query: 357 QDMGFLSSQNEVLMKETVPTKELY-LNLRSSDTWV 390
+D L++Q + + E P E Y LN+ + WV
Sbjct: 314 EDEAMLTAQQKAI--EANPDHEFYNLNIDAGGMWV 346
>gi|148554460|ref|YP_001262042.1| vanillate monooxygenase [Sphingomonas wittichii RW1]
gi|148499650|gb|ABQ67904.1| Vanillate monooxygenase [Sphingomonas wittichii RW1]
Length = 423
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 7/167 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKD-GNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
WY L +V D L + + ++L++D +G D CPHR A LS G+ +DG +
Sbjct: 88 WYVAALAGEVEADL-LRRLILGEPVLLFRDEQSGAPSALHDLCPHRFAPLSRGKRVDGGI 146
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
+C YHG F GKCV P + +I +A VR + V E G++W+WM + +P ++
Sbjct: 147 QCGYHGLVFAPSGKCVLNPH--GNGRILPTAAVRAFPVIERHGMIWIWMGEHDLADPSRI 204
Query: 202 PWFENFARPGFQDVSTIHELP--YDHSILLENLMDPAHIPISHDRTD 246
P F ++ Q LP ++ +L +N++D +H H D
Sbjct: 205 PDF-SYLDAADQRTRGAGYLPTRANYQLLTDNILDASHADYLHALLD 250
>gi|410944264|ref|ZP_11376005.1| oxidoreductase [Gluconobacter frateurii NBRC 101659]
Length = 203
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 82 EWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
+W+PL L DVP + + ++I L++ +G + ++DRCPHR +LS G + + L
Sbjct: 3 DWFPLALGMDVPPETAAPARLCGKEIALWRGADGNVHAWEDRCPHRGMRLSFGFVRNDNL 62
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKT 194
CLYHGWQF + C IP P + ++P + Y +E GV+WV +++
Sbjct: 63 ACLYHGWQFGADATCRHIPAHP-ELRVPGTIHAHAYRAEERAGVIWVSLNEDA 114
>gi|114462367|gb|ABI75109.1| phenylpropionate dioxygenase [Cylindrospermopsis raciborskii T3]
Length = 334
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 144/336 (42%), Gaps = 41/336 (12%)
Query: 87 YLTKDVPDDAPLGLT---VFDQQIVLYK--DGNGELRCYQDRCPHRLAKLSEGQLIDGRL 141
++ +V D P +T + ++VL++ + N ++ + D CPHR LS G++ + L
Sbjct: 13 HVVANVEDCKPGSITRSRLLGVKLVLWRSYEQNSPIQVWLDYCPHRGVPLSMGEITNNTL 72
Query: 142 ECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW++ GKC++IP P P SA RTY +E G+VWV + + +
Sbjct: 73 VCPYHGWRYNEAGKCIQIPAHPGMVP-PASAEARTYHSQERYGLVWVCLGDPV----NDI 127
Query: 202 PWFENFARPGFQDVSTIHELPYDHSI-LLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
P F + P + T L + +++N +D +H P HD W R + FE
Sbjct: 128 PSFPEWDDPNYHKTYTKSYLIKASAFRVMDNSLDVSHFPFIHD--GWLGDRNYTKVEEFE 185
Query: 261 VTERTDRGFAGRWGKE--------KDEPLPNFLRFEAPCVLQNNRELVDSKTGEKHYFTG 312
V D G++ + +D+ N+ R P + S++ E
Sbjct: 186 VKLDKDGLTMGKYQFQTSRIVSHIEDDSWVNWFRLSHPLC-----QYCVSESPEMR-IVD 239
Query: 313 LFLCRPTGQGKSMLIVRFGATKRSPL-AKLFPKWYFHQNASKVFEQDMGFLSSQNEVLMK 371
L P + S+L + L +K+ ++ + EQD+ L +Q V +
Sbjct: 240 LMTITPIDEENSVLRMLIMWNGYETLESKMLTEY------DETIEQDIRILHAQQPVRLP 293
Query: 372 ETVPTKELYLNLRS------SDTWVAEYRKWMDKVG 401
P K++ L S SD YR+W+ ++G
Sbjct: 294 LLTP-KQINTQLFSHEIHVPSDRCTLAYRRWLKQLG 328
>gi|32967993|gb|AAP92508.1| capreomycidine hydroxylase [Streptomyces vinaceus]
Length = 343
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
W+P+ D+ + G ++ +++V+Y D G + Q CPHR L GQL DG LE
Sbjct: 26 WFPVARVADLKNGVASG-SILGEELVVYGD-EGSVTVAQGFCPHRGVALRLGQLRDGALE 83
Query: 143 CLYHGWQFE-GEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKL 201
C YHGW FE G G+C +IP LP P +A +RT+ + + G+VW + P P
Sbjct: 84 CPYHGWLFETGSGRCTRIPSLPPGRGRPHTA-LRTHPAEVAYGLVWSCLGDPFLPLPRLP 142
Query: 202 PWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISH 242
+ ++ R G + T++ +L EN D AH P H
Sbjct: 143 EYVDDSWRLGAGEPYTLN---CGMRLLTENFRDKAHFPFVH 180
>gi|83746974|ref|ZP_00944020.1| Vanillate O-demethylase oxygenase subunit [Ralstonia solanacearum
UW551]
gi|207738780|ref|YP_002257173.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum IPO1609]
gi|83726394|gb|EAP73526.1| Vanillate O-demethylase oxygenase subunit [Ralstonia solanacearum
UW551]
gi|206592148|emb|CAQ59054.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum IPO1609]
Length = 342
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T D D PLG + +++V Y+ G++ +D CPHR A LS G + DG L
Sbjct: 7 WY-VACTPDEIADKPLGRRICGERMVFYRGPEGKMAALEDFCPHRGAPLSLGFVRDGHLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +GKC +P ++ C+R + V E G +WVW +P ++
Sbjct: 66 CGYHGLTMKADGKCASMP----GQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPAQIH 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
E + ++ + D+ ++++NLMD H H + + E+A P
Sbjct: 122 HLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAP 175
>gi|160896413|ref|YP_001561995.1| Rieske (2Fe-2S) domain-containing protein [Delftia acidovorans
SPH-1]
gi|333917152|ref|YP_004490884.1| Rieske (2Fe-2S) domain-containing protein [Delftia sp. Cs1-4]
gi|160361997|gb|ABX33610.1| Rieske (2Fe-2S) domain protein [Delftia acidovorans SPH-1]
gi|333747352|gb|AEF92529.1| Rieske (2Fe-2S) iron-sulfur domain protein [Delftia sp. Cs1-4]
Length = 341
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 5/187 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + D P+ + F ++I L++D G++ +D CPHR A LS+G ++ RL
Sbjct: 23 WYAV-CPSDFVKTQPVSVRRFGRKIALWRDAAGQVHALEDHCPHRGAPLSQGVILGDRLA 81
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + G+G K+P P K+ S + +E+ G ++++ S K +
Sbjct: 82 CPYHGVEVRGDGTVTKVPGSPG-CKLEGSRAALAFHAREAHGAIFLYNSDKAVDEAPEFT 140
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVT 262
E P + + E D+ L+N+MDP H H ++ A E F+V
Sbjct: 141 LPEELTSPEYSNFLCYAEWRSDYRYALDNVMDPMHGTFLHKQSHSMA--EGDSKATFQVR 198
Query: 263 ERTDRGF 269
E TD GF
Sbjct: 199 E-TDDGF 204
>gi|399020721|ref|ZP_10722847.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
gi|398094256|gb|EJL84624.1| ring-hydroxylating dioxygenase, large terminal subunit
[Herbaspirillum sp. CF444]
Length = 348
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 9/189 (4%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WYP+ ++ V + P+ L ++ VL+++ NG L +D CPHR A LS G + R+
Sbjct: 21 WYPICPSEFVAE-RPVSLRRLGKKFVLWREANGALHALEDHCPHRGAPLSMGIAMGDRIA 79
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWM--SQKTPPNPDK 200
C YHG Q +G + +P P K+ + R+Y V E+ G ++++ S P P +
Sbjct: 80 CGYHGVQVRFDGVVMSVPGSPG-CKLEGAKATRSYHVTEACGAIFLFNAGSDIAEPPPLR 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
LP E P + + E D+ +L+N+MDP H H ++ A+ ++ G
Sbjct: 139 LP--EELTSPEYSNFLCYTEWKGDYRYVLDNVMDPMHGTFLHKQSHSMAEGDNTASFGI- 195
Query: 261 VTERTDRGF 269
TD GF
Sbjct: 196 --RETDIGF 202
>gi|386335217|ref|YP_006031387.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum Po82]
gi|334197667|gb|AEG70851.1| vanillate o-demethylase oxygenase subunit protein [Ralstonia
solanacearum Po82]
Length = 342
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY + T D D PLG + +++V Y+ G++ +D CPHR A LS G + DG L
Sbjct: 7 WY-VACTPDEIADKPLGRRICGERMVFYRGPEGKVAALEDFCPHRGAPLSLGFVRDGHLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG + +GKC +P ++ C+R + V E G +WVW +P ++
Sbjct: 66 CGYHGLTMKADGKCASMP----GQRVGGFPCIRQFPVVERYGFIWVWPGDAELADPARIH 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQP 256
E + ++ + D+ ++++NLMD H H + + E+A P
Sbjct: 122 HLEWAESKAWAYGGGLYHIQCDYRLMIDNLMDLTHETYVHATSIGQPEIEEAAP 175
>gi|433455970|ref|ZP_20414034.1| vanillate O-demethylase oxygenase component [Arthrobacter
crystallopoietes BAB-32]
gi|432196878|gb|ELK53298.1| vanillate O-demethylase oxygenase component [Arthrobacter
crystallopoietes BAB-32]
Length = 364
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 128/322 (39%), Gaps = 38/322 (11%)
Query: 97 PLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLI--DGRLECLYHGWQFEGEG 154
P+ + ++ + LY+ +G+ D C HRLA LS G+ I DG ++C YHG + G
Sbjct: 35 PMSRRIANRPVALYRTEDGKAVALADACWHRLAPLSMGKTIGKDG-IQCPYHGIVYNSAG 93
Query: 155 KCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLPWFENFARPGFQ- 213
+CV +PA I SA V ++ V E VWVW+ T +PD +P P +
Sbjct: 94 RCVS---MPAQETINPSATVPSFPVVERYRYVWVWLGDPTMADPDLVPDMHQMTSPEWAG 150
Query: 214 DVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRW 273
D TIH ++ ++L+NLMD H H + +E+ F V+ + RW
Sbjct: 151 DGETIHA-DCNYQLVLDNLMDLTHEEFVHSS---SIGQEELSESDFVVSHDGNTVTVTRW 206
Query: 274 GKEKDEP----------LPNF---------LRFEAPCVLQNNRELVDSKTG-----EKHY 309
D P P F +RFEAP ++ + + + TG
Sbjct: 207 MLNIDAPPFWLKNMRDKFPGFEGKVDRWQIIRFEAPSTIRIDVGVAKAGTGAPEGDRSQG 266
Query: 310 FTGLFLCRPTGQGKSMLIVRFGATKRSPLAKLFPKWYFHQNASKVFEQDMGFLSSQNEVL 369
G + T + + + L VF +D L +Q E +
Sbjct: 267 VNGYVMNTITPETDRSCHYFWAFMRNYRLESQLITTQLRNGVHGVFGEDEAMLKAQQEAI 326
Query: 370 MKETVPTKELY-LNLRSSDTWV 390
+ P E Y LN+ WV
Sbjct: 327 --DANPDYEFYNLNIDGGGMWV 346
>gi|2271500|gb|AAC27107.1| vanillate demethylase [Acinetobacter sp. ADP1]
Length = 358
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Query: 83 WYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGRLE 142
WY +++ D PLG T+ ++IV Y+ ++ +D CPHR A LS G + DG L
Sbjct: 7 WYVACRPEEI-QDKPLGRTICGEKIVFYRGKENKVAAVEDFCPHRGAPLSLGYVEDGHLV 65
Query: 143 CLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDKLP 202
C YHG EGK + +P ++ C + Y V E G +WVW +K+ N LP
Sbjct: 66 CGYHGLVMGCEGKTIAMPA----QRVGGFPCNKAYAVVEKYGFIWVWPGEKSLANEADLP 121
Query: 203 WFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPL 257
E P + + + D+ ++++NLMD H H + + ++A P+
Sbjct: 122 TLEWADHPEWSYGGGLFHIQCDYRLMIDNLMDLTHETYVHSSSIGQKEIDEALPV 176
>gi|427424381|ref|ZP_18914504.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-136]
gi|425698681|gb|EKU68314.1| Rieske [2Fe-2S] domain protein [Acinetobacter baumannii WC-136]
Length = 355
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 5/189 (2%)
Query: 81 EEWYPLYLTKDVPDDAPLGLTVFDQQIVLYKDGNGELRCYQDRCPHRLAKLSEGQLIDGR 140
++W+P+ + +V + P+G+T + IV+++D G++ +DRCPHR A+LS G + R
Sbjct: 21 DQWHPVLASWEVAAN-PVGITRLGENIVVWRDAEGQVHALEDRCPHRGARLSLGWNLGDR 79
Query: 141 LECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTYEVKESQGVVWVWMSQKTPPNPDK 200
+ C YHG + +G +P + + + + C++ Y V E G +++W P
Sbjct: 80 VACWYHGVEVRADGVVADVPAVH-ECPMTGTKCLKNYPVIEQHGAIFIWFGIDANEQPAP 138
Query: 201 LPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDAQPLGFE 260
L + E A + + +H ++N+MDP H H + A E +
Sbjct: 139 LEFPEQLASEEWSAFLCQADWKVNHQYAIDNVMDPMHGTYLHATSHSMADGERTAEMRHR 198
Query: 261 VTERTDRGF 269
TD GF
Sbjct: 199 T---TDNGF 204
>gi|194740231|gb|ACF94653.1| dioxygenase [Dolichospermum circinale AWQC150E]
Length = 235
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 118 RCYQDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACVRTY 177
+ +QD CPHR LS G++++ L C YHGW++ GKCV+IP P D P SA +TY
Sbjct: 1 QVWQDHCPHRGVALSMGEIVNNTLVCAYHGWRYNEAGKCVQIPAHP-DMIPPASAIAKTY 59
Query: 178 EVKESQGVVWVWMSQKTPPNP-DKLPWFENFARPGFQDVSTIHELPYDHSI-LLENLMDP 235
+E G+VWV + NP + +P F + P + T L + +++N +D
Sbjct: 60 HCQERYGLVWVCLG-----NPVNDIPEFPEWDDPNYHKTYTKSYLIQASAFRVMDNSLDV 114
Query: 236 AHIPISHDRTDWTAKREDAQPLGFEVTERTDRGFAGRWGKE--------KDEPLPNFLRF 287
+H P HD W R + FEV D G++ + +D+ N+LR
Sbjct: 115 SHFPFIHD--GWLGDRNYTKVENFEVKLDKDGLTMGKYQFQTSRIVSDIEDDSWVNWLRL 172
Query: 288 EAP 290
P
Sbjct: 173 SHP 175
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.135 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,066,231,759
Number of Sequences: 23463169
Number of extensions: 405378605
Number of successful extensions: 847889
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3038
Number of HSP's successfully gapped in prelim test: 3140
Number of HSP's that attempted gapping in prelim test: 838358
Number of HSP's gapped (non-prelim): 6634
length of query: 534
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 387
effective length of database: 8,910,109,524
effective search space: 3448212385788
effective search space used: 3448212385788
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)