Query 039077
Match_columns 149
No_of_seqs 30 out of 32
Neff 2.4
Searched_HMMs 13730
Date Mon Mar 25 09:52:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039077.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039077hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2gqba1 a.282.1.1 (A:1-130) Hy 50.5 3.7 0.00027 29.8 2.1 15 89-103 82-96 (130)
2 d2ak3a1 c.37.1.1 (A:0-124,A:16 49.3 7.5 0.00055 26.5 3.5 33 104-136 60-95 (189)
3 d3adka_ c.37.1.1 (A:) Adenylat 47.4 5.5 0.0004 26.6 2.5 34 104-137 62-100 (194)
4 d1kn6a_ d.58.3.3 (A:) Prohormo 42.2 10 0.00076 23.8 3.1 24 89-112 12-37 (73)
5 d1xd7a_ a.4.5.55 (A:) Hypothet 40.7 4.2 0.0003 26.7 1.0 24 100-125 55-78 (127)
6 d1s3ga1 c.37.1.1 (A:1-125,A:16 40.6 8.6 0.00063 25.2 2.6 32 104-135 54-89 (182)
7 d1p7ia_ a.4.1.1 (A:) Engrailed 39.5 7.7 0.00056 22.6 2.0 14 89-102 25-38 (53)
8 d1jroa3 d.87.2.1 (A:346-462) X 34.7 3.6 0.00026 27.0 -0.1 30 89-118 86-115 (117)
9 d1k77a_ c.1.15.5 (A:) Hypothet 31.2 10 0.00075 25.1 1.8 32 89-120 16-47 (260)
10 d2craa1 a.4.1.1 (A:7-64) Homeo 31.1 12 0.0009 22.4 2.0 14 89-102 27-40 (58)
11 d1le8a_ a.4.1.1 (A:) Mating ty 30.7 13 0.00095 21.6 2.0 14 89-102 23-36 (53)
12 d2f99a1 d.17.4.9 (A:2-141) Akl 29.7 8.4 0.00061 24.7 1.0 12 102-113 128-139 (140)
13 d1b0aa2 c.58.1.2 (A:2-122) Tet 29.6 11 0.00082 25.1 1.7 32 91-122 51-82 (121)
14 d1a4ia2 c.58.1.2 (A:2-126) Tet 28.1 9.8 0.00071 25.6 1.2 30 93-122 55-84 (125)
15 d1vjka_ d.15.3.1 (A:) Molybdop 27.8 7.7 0.00056 23.7 0.5 28 95-122 11-38 (88)
16 d1ig7a_ a.4.1.1 (A:) Msx-1 hom 26.8 17 0.0012 21.4 2.0 14 89-102 26-39 (58)
17 d1jgga_ a.4.1.1 (A:) Even-skip 26.5 17 0.0012 21.4 2.0 14 89-102 25-38 (57)
18 d2c0sa1 a.30.7.1 (A:1-57) Hypo 26.1 15 0.0011 23.2 1.8 14 91-104 15-28 (57)
19 d1s7ea1 a.4.1.1 (A:103-152) He 25.6 12 0.00091 21.2 1.2 14 89-102 24-37 (50)
20 d1ulza3 d.142.1.2 (A:115-328) 25.1 24 0.0017 23.9 2.8 31 79-109 12-45 (214)
21 d1y8xb1 c.111.1.2 (B:349-440) 24.9 11 0.00079 25.4 0.9 26 108-133 6-32 (92)
22 d1k61a_ a.4.1.1 (A:) mat alpha 24.7 19 0.0014 21.3 2.0 14 89-102 27-40 (60)
23 d1zq3p1 a.4.1.1 (P:2-68) Homeo 23.0 21 0.0015 21.6 2.0 14 89-102 27-40 (67)
24 d1e3oc1 a.4.1.1 (C:104-160) Oc 22.2 23 0.0017 20.8 2.0 14 89-102 24-37 (57)
25 d2fsra1 d.108.1.1 (A:4-167) Pr 21.8 16 0.0011 22.5 1.2 15 93-107 135-149 (164)
26 d1ffvc1 d.87.2.1 (C:178-287) C 21.8 19 0.0014 22.9 1.7 17 89-105 86-102 (110)
27 d1pufb_ a.4.1.1 (B:) pbx1 {Hum 21.7 23 0.0017 21.6 2.0 15 89-103 30-44 (73)
28 d2e1oa1 a.4.1.1 (A:8-64) Homeo 21.5 24 0.0018 20.6 2.0 14 89-102 26-39 (57)
29 d1h72c1 d.14.1.5 (C:5-167) Hom 21.5 22 0.0016 23.9 2.1 26 89-114 114-139 (163)
30 d1e3ia2 c.2.1.1 (A:168-341) Al 21.1 10 0.00076 25.8 0.2 45 88-132 60-108 (174)
31 d9anta_ a.4.1.1 (A:) Antennape 20.9 25 0.0018 20.9 2.0 14 89-102 23-36 (56)
32 d1b72a_ a.4.1.1 (A:) Homeobox 20.2 25 0.0018 22.5 2.0 15 88-102 52-66 (88)
33 d2j9ga3 d.142.1.2 (A:115-330) 20.0 34 0.0025 23.5 2.9 34 76-109 10-47 (216)
No 1
>d2gqba1 a.282.1.1 (A:1-130) Hypothetical protein RPA2825 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=50.46 E-value=3.7 Score=29.77 Aligned_cols=15 Identities=33% Similarity=0.660 Sum_probs=14.0
Q ss_pred CHHHHHHHHHhhCch
Q 039077 89 SADCRKQIAESYGFR 103 (149)
Q Consensus 89 s~e~R~qlAe~yGf~ 103 (149)
|=+.||+||+++||.
T Consensus 82 SL~aRKeLA~EL~y~ 96 (130)
T d2gqba1 82 SLSARKELAKELGYS 96 (130)
T ss_dssp SHHHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHhCCC
Confidence 789999999999996
No 2
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=49.28 E-value=7.5 Score=26.46 Aligned_cols=33 Identities=21% Similarity=0.297 Sum_probs=23.3
Q ss_pred hcCCCCCCccc---HHHHhhhcCceeeEeecceeec
Q 039077 104 QIGEPLPENVT---MKDVIDSLPKKVLFLFASSCTL 136 (149)
Q Consensus 104 qIGe~LPd~VT---LkdVi~sLPkeVFeidd~~~~~ 136 (149)
.-|..+||+++ +++.+......-|-+|+|-.+.
T Consensus 60 ~~~~~v~~~~~~~l~~~~~~~~~~~~~ildGfPr~~ 95 (189)
T d2ak3a1 60 DQGKLIPDDVMTRLVLHELKNLTQYNWLLDGFPRTL 95 (189)
T ss_dssp HTTCCCCHHHHHHHHHHHHHHHTTSCEEEESCCCSH
T ss_pred hhhhhccchhhhhhhhhhhhhhhhcCcccccccchh
Confidence 34888898886 4455666667778888886664
No 3
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=47.41 E-value=5.5 Score=26.60 Aligned_cols=34 Identities=12% Similarity=0.228 Sum_probs=23.2
Q ss_pred hcCCCCCCcccHHHHhhhc-----CceeeEeecceeecc
Q 039077 104 QIGEPLPENVTMKDVIDSL-----PKKVLFLFASSCTLN 137 (149)
Q Consensus 104 qIGe~LPd~VTLkdVi~sL-----PkeVFeidd~~~~~~ 137 (149)
.-|..+||+++.+-+.+.| -..-|-+|+|-++..
T Consensus 62 ~~~~~~~~~~~~~~~~~~l~~~~~~~~g~ildg~pr~~~ 100 (194)
T d3adka_ 62 EKGQLVPLETVLDMLRDAMVAKVDTSKGFLIDGYPREVK 100 (194)
T ss_dssp TTTCCCCHHHHHHHHHHHHHTTTTTCSCEEEESCCSSHH
T ss_pred hhccCCchheeeeehhhhhhhcccccccceeeeccchhH
Confidence 4488999999876665443 244588888876543
No 4
>d1kn6a_ d.58.3.3 (A:) Prohormone convertase 1 pro-domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.17 E-value=10 Score=23.79 Aligned_cols=24 Identities=25% Similarity=0.512 Sum_probs=19.1
Q ss_pred CHHHHHHHHHhhCchhcCCC--CCCc
Q 039077 89 SADCRKQIAESYGFRQIGEP--LPEN 112 (149)
Q Consensus 89 s~e~R~qlAe~yGf~qIGe~--LPd~ 112 (149)
.+|+=.+||+++||.-.|.= |+|-
T Consensus 12 g~~~A~~iA~~~Gf~n~GqIg~l~d~ 37 (73)
T d1kn6a_ 12 GQEAASAIAEELGYDLLGQIGSLENH 37 (73)
T ss_dssp THHHHHHHHHHHTCEECCCCSSSSCE
T ss_pred ChHHHHHHHHHhCCEEecCCCCCCCE
Confidence 46778899999999988875 5553
No 5
>d1xd7a_ a.4.5.55 (A:) Hypothetical protein ywnA {Bacillus subtilis [TaxId: 1423]}
Probab=40.65 E-value=4.2 Score=26.69 Aligned_cols=24 Identities=17% Similarity=0.429 Sum_probs=18.6
Q ss_pred hCchhcCCCCCCcccHHHHhhhcCce
Q 039077 100 YGFRQIGEPLPENVTMKDVIDSLPKK 125 (149)
Q Consensus 100 yGf~qIGe~LPd~VTLkdVi~sLPke 125 (149)
.|+. ...+ |+++||.||+..+-.+
T Consensus 55 ~GGy-Lar~-p~~Itl~dI~~ave~~ 78 (127)
T d1xd7a_ 55 PGAS-LKKD-PADISLLEVYRAVQKQ 78 (127)
T ss_dssp SSCE-ESSC-GGGCBHHHHHHHHCC-
T ss_pred CCcc-ccCC-HHhCcHHHHHHHHcCC
Confidence 4564 6776 9999999999998544
No 6
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=40.61 E-value=8.6 Score=25.22 Aligned_cols=32 Identities=25% Similarity=0.289 Sum_probs=21.4
Q ss_pred hcCCCCCCcccHHHHhhhcC----ceeeEeecceee
Q 039077 104 QIGEPLPENVTMKDVIDSLP----KKVLFLFASSCT 135 (149)
Q Consensus 104 qIGe~LPd~VTLkdVi~sLP----keVFeidd~~~~ 135 (149)
.-|+.+||..+..-+.+.+- +..|-+|++--+
T Consensus 54 ~~g~~~~d~~~~~~~~~~~~~~~~~~~~vl~g~p~~ 89 (182)
T d1s3ga1 54 DQGALVPDEVTIGIVRERLSKSDCDNGFLLDGFPRT 89 (182)
T ss_dssp HHTCCCCHHHHHHHHHHHHTSSTTSSCEEEESCCCS
T ss_pred HcCCcccCcchhHHHHHhhcccccccceeeeccccc
Confidence 44889999888776666553 455777776543
No 7
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=39.53 E-value=7.7 Score=22.62 Aligned_cols=14 Identities=21% Similarity=0.496 Sum_probs=12.7
Q ss_pred CHHHHHHHHHhhCc
Q 039077 89 SADCRKQIAESYGF 102 (149)
Q Consensus 89 s~e~R~qlAe~yGf 102 (149)
+.++|++||++.|.
T Consensus 25 ~~~~r~~LA~~lgL 38 (53)
T d1p7ia_ 25 TERRRQQLSSELGL 38 (53)
T ss_dssp CHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhCC
Confidence 68999999999985
No 8
>d1jroa3 d.87.2.1 (A:346-462) Xanthine dehydrogenase chain A, domain 4 {Rhodobacter capsulatus [TaxId: 1061]}
Probab=34.68 E-value=3.6 Score=26.96 Aligned_cols=30 Identities=30% Similarity=0.336 Sum_probs=23.0
Q ss_pred CHHHHHHHHHhhCchhcCCCCCCcccHHHH
Q 039077 89 SADCRKQIAESYGFRQIGEPLPENVTMKDV 118 (149)
Q Consensus 89 s~e~R~qlAe~yGf~qIGe~LPd~VTLkdV 118 (149)
|+|||++|+..+-+|-+-|-.-+.+++.||
T Consensus 86 s~~YR~~l~~~L~~R~l~e~~~~~~~~~e~ 115 (117)
T d1jroa3 86 SAAYRMNAAQAMALRYVRELSGEAVAVLEV 115 (117)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCCCGGGC
T ss_pred CHHHHHHHHHHHHHHHHHHHhcCccceecC
Confidence 899999999998877766655566666654
No 9
>d1k77a_ c.1.15.5 (A:) Hypothetical protein YgbM (EC1530) {Escherichia coli [TaxId: 562]}
Probab=31.25 E-value=10 Score=25.07 Aligned_cols=32 Identities=19% Similarity=0.133 Sum_probs=22.5
Q ss_pred CHHHHHHHHHhhCchhcCCCCCCcccHHHHhh
Q 039077 89 SADCRKQIAESYGFRQIGEPLPENVTMKDVID 120 (149)
Q Consensus 89 s~e~R~qlAe~yGf~qIGe~LPd~VTLkdVi~ 120 (149)
+=+++-++|++.||.-|.=-.|.+.++.++-+
T Consensus 16 pl~e~i~~a~~~Gf~gIEl~~~~~~~~~~~~~ 47 (260)
T d1k77a_ 16 PFIERFAAARKAGFDAVEFLFPYNYSTLQIQK 47 (260)
T ss_dssp CGGGHHHHHHHHTCSEEECSCCTTSCHHHHHH
T ss_pred CHHHHHHHHHHhCCCEEEECCCCCCCHHHHHH
Confidence 34677788899999988655677766655433
No 10
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.10 E-value=12 Score=22.35 Aligned_cols=14 Identities=21% Similarity=0.444 Sum_probs=12.8
Q ss_pred CHHHHHHHHHhhCc
Q 039077 89 SADCRKQIAESYGF 102 (149)
Q Consensus 89 s~e~R~qlAe~yGf 102 (149)
|.++|.+||+..|.
T Consensus 27 ~~~~r~~LA~~l~l 40 (58)
T d2craa1 27 TKDKRRKISAATSL 40 (58)
T ss_dssp CHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHcCC
Confidence 78999999999985
No 11
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.70 E-value=13 Score=21.61 Aligned_cols=14 Identities=14% Similarity=0.453 Sum_probs=12.8
Q ss_pred CHHHHHHHHHhhCc
Q 039077 89 SADCRKQIAESYGF 102 (149)
Q Consensus 89 s~e~R~qlAe~yGf 102 (149)
+.++|++||++.|.
T Consensus 23 ~~~~~~~LA~~lgl 36 (53)
T d1le8a_ 23 NSKEKEEVAKKCGI 36 (53)
T ss_dssp CHHHHHHHHHHTTS
T ss_pred CHHHHHHHHHHHCC
Confidence 79999999999984
No 12
>d2f99a1 d.17.4.9 (A:2-141) Aklanonic acid methyl ester cyclase, AknH {Streptomyces galilaeus [TaxId: 33899]}
Probab=29.70 E-value=8.4 Score=24.70 Aligned_cols=12 Identities=58% Similarity=1.171 Sum_probs=9.4
Q ss_pred chhcCCCCCCcc
Q 039077 102 FRQIGEPLPENV 113 (149)
Q Consensus 102 f~qIGe~LPd~V 113 (149)
++|+|.|.|++.
T Consensus 128 ~~QLG~~~p~~~ 139 (140)
T d2f99a1 128 YRQLGEPWPETE 139 (140)
T ss_dssp HHHTTCCCCSSC
T ss_pred HHHCCCCCCCCC
Confidence 467899999874
No 13
>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=29.59 E-value=11 Score=25.10 Aligned_cols=32 Identities=19% Similarity=0.428 Sum_probs=26.3
Q ss_pred HHHHHHHHhhCchhcCCCCCCcccHHHHhhhc
Q 039077 91 DCRKQIAESYGFRQIGEPLPENVTMKDVIDSL 122 (149)
Q Consensus 91 e~R~qlAe~yGf~qIGe~LPd~VTLkdVi~sL 122 (149)
...++-|++.|+...=-.||+++|-+|+++.+
T Consensus 51 ~~k~k~a~~lGi~~~~~~l~~~~t~~~l~~~I 82 (121)
T d1b0aa2 51 ASKRKACEEVGFVSRSYDLPETTSEAELLELI 82 (121)
T ss_dssp HHHHHHHHHHTCEECCEEECTTCCHHHHHHHH
T ss_pred HHHHHHHHhhccceeeeeccccccHHHHHHHH
Confidence 34566799999999889999999988887653
No 14
>d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.13 E-value=9.8 Score=25.56 Aligned_cols=30 Identities=23% Similarity=0.387 Sum_probs=26.1
Q ss_pred HHHHHHhhCchhcCCCCCCcccHHHHhhhc
Q 039077 93 RKQIAESYGFRQIGEPLPENVTMKDVIDSL 122 (149)
Q Consensus 93 R~qlAe~yGf~qIGe~LPd~VTLkdVi~sL 122 (149)
...-|++.|+...-..||+++|-.|+++.+
T Consensus 55 k~k~a~~~Gi~~~~~~l~~~~~e~el~~~I 84 (125)
T d1a4ia2 55 KLKAAEEIGIKATHIKLPRTTTESEVMKYI 84 (125)
T ss_dssp HHHHHHHHTCEEEEEEECTTCCHHHHHHHH
T ss_pred HHHHHHhccceEEEEecCcchhHHHHHHHH
Confidence 667899999999999999999988888764
No 15
>d1vjka_ d.15.3.1 (A:) Molybdopterin synthase subunit MoaD {Pyrococcus furiosus [TaxId: 2261]}
Probab=27.78 E-value=7.7 Score=23.67 Aligned_cols=28 Identities=21% Similarity=0.438 Sum_probs=19.6
Q ss_pred HHHHhhCchhcCCCCCCcccHHHHhhhc
Q 039077 95 QIAESYGFRQIGEPLPENVTMKDVIDSL 122 (149)
Q Consensus 95 qlAe~yGf~qIGe~LPd~VTLkdVi~sL 122 (149)
++.|..|-...==++|++.|++|+++.|
T Consensus 11 ~lre~~G~~~~~~~~~~~~Tv~~l~~~L 38 (88)
T d1vjka_ 11 RFRQLAGVDEEEIELPEGARVRDLIEEI 38 (88)
T ss_dssp HHHHHHSSSEEEEEECTTCBHHHHHHHH
T ss_pred HHHHHhCCCeEEEECCCCCCHHHHHHHH
Confidence 3455556555444688999999998877
No 16
>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.85 E-value=17 Score=21.37 Aligned_cols=14 Identities=21% Similarity=0.264 Sum_probs=12.5
Q ss_pred CHHHHHHHHHhhCc
Q 039077 89 SADCRKQIAESYGF 102 (149)
Q Consensus 89 s~e~R~qlAe~yGf 102 (149)
|.++|++||+..|.
T Consensus 26 ~~~~r~~LA~~l~l 39 (58)
T d1ig7a_ 26 SIAERAEFSSSLSL 39 (58)
T ss_dssp CHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHhCC
Confidence 68999999999984
No 17
>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=26.53 E-value=17 Score=21.41 Aligned_cols=14 Identities=21% Similarity=0.242 Sum_probs=12.7
Q ss_pred CHHHHHHHHHhhCc
Q 039077 89 SADCRKQIAESYGF 102 (149)
Q Consensus 89 s~e~R~qlAe~yGf 102 (149)
|.++|.+||++.|.
T Consensus 25 ~~~~r~~LA~~lgl 38 (57)
T d1jgga_ 25 SRPRRCELAAQLNL 38 (57)
T ss_dssp CHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHhCC
Confidence 78999999999984
No 18
>d2c0sa1 a.30.7.1 (A:1-57) Hypothetical protein BAS4809, C-terminal domain {Bacillus anthracis [TaxId: 1392]}
Probab=26.13 E-value=15 Score=23.17 Aligned_cols=14 Identities=29% Similarity=0.489 Sum_probs=11.1
Q ss_pred HHHHHHHHhhCchh
Q 039077 91 DCRKQIAESYGFRQ 104 (149)
Q Consensus 91 e~R~qlAe~yGf~q 104 (149)
++--+|++.|||+-
T Consensus 15 ~eLi~Lv~~YGf~h 28 (57)
T d2c0sa1 15 KELIYLVEKYGFTH 28 (57)
T ss_dssp HHHHHHHHHTCTTS
T ss_pred HHHHHHHHHHCCCc
Confidence 55668999999973
No 19
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.58 E-value=12 Score=21.20 Aligned_cols=14 Identities=21% Similarity=0.430 Sum_probs=12.6
Q ss_pred CHHHHHHHHHhhCc
Q 039077 89 SADCRKQIAESYGF 102 (149)
Q Consensus 89 s~e~R~qlAe~yGf 102 (149)
+.++|.+||++.|.
T Consensus 24 ~~~~~~~LA~~l~l 37 (50)
T d1s7ea1 24 SKELQITISQQLGL 37 (50)
T ss_dssp THHHHHHHHTTSCS
T ss_pred CHHHHHHHHHHHCc
Confidence 68999999999984
No 20
>d1ulza3 d.142.1.2 (A:115-328) Biotin carboxylase (BC), domain 2 {Aquifex aeolicus [TaxId: 63363]}
Probab=25.09 E-value=24 Score=23.88 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=24.7
Q ss_pred EeecCC---CCCCCHHHHHHHHHhhCchhcCCCC
Q 039077 79 AVPVAP---PSEDSADCRKQIAESYGFRQIGEPL 109 (149)
Q Consensus 79 avPVap---pp~Ds~e~R~qlAe~yGf~qIGe~L 109 (149)
-+|++| -.++|.|+-.+.+++.||=.|=+|.
T Consensus 12 GvP~~p~~~~~v~s~~ea~~~~~~ig~P~vvKP~ 45 (214)
T d1ulza3 12 GVPVVPGSDGVLKSLEEAKALAREIGYPVLLKAT 45 (214)
T ss_dssp TCCBCCBCSSSCCCHHHHHHHHHHHCSSEEEEEC
T ss_pred CCCcCCCcCCCCCCHHHHHHHHHHcCCCEEEeec
Confidence 357655 2478999999999999998877775
No 21
>d1y8xb1 c.111.1.2 (B:349-440) UBA3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.86 E-value=11 Score=25.43 Aligned_cols=26 Identities=15% Similarity=0.353 Sum_probs=18.4
Q ss_pred CCCCcccHHHHhhhcCcee-eEeecce
Q 039077 108 PLPENVTMKDVIDSLPKKV-LFLFASS 133 (149)
Q Consensus 108 ~LPd~VTLkdVi~sLPkeV-Feidd~~ 133 (149)
+++.+.||+|+|+.|=..- |.+-.-+
T Consensus 6 ~~~~~~TL~~li~~L~e~p~~qlk~Ps 32 (92)
T d1y8xb1 6 QFSPSAKLQEVLDYLTNSASLQMKSPA 32 (92)
T ss_dssp ECCTTCBHHHHHHHHHHCTTCCCSSCE
T ss_pred EcCCCCcHHHHHHHHhhChHhhccCCc
Confidence 3678999999999986542 5554433
No 22
>d1k61a_ a.4.1.1 (A:) mat alpha2 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.74 E-value=19 Score=21.31 Aligned_cols=14 Identities=0% Similarity=0.098 Sum_probs=12.9
Q ss_pred CHHHHHHHHHhhCc
Q 039077 89 SADCRKQIAESYGF 102 (149)
Q Consensus 89 s~e~R~qlAe~yGf 102 (149)
|.++|.+||++.|.
T Consensus 27 s~~e~~~La~~~gL 40 (60)
T d1k61a_ 27 DTKGLENLMKNTSL 40 (60)
T ss_dssp CHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHCc
Confidence 79999999999995
No 23
>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=23.00 E-value=21 Score=21.63 Aligned_cols=14 Identities=7% Similarity=0.140 Sum_probs=12.7
Q ss_pred CHHHHHHHHHhhCc
Q 039077 89 SADCRKQIAESYGF 102 (149)
Q Consensus 89 s~e~R~qlAe~yGf 102 (149)
+.++|.+||++.|.
T Consensus 27 ~~~~r~~LA~~l~l 40 (67)
T d1zq3p1 27 TAPRLADLSAKLAL 40 (67)
T ss_dssp CHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHhCC
Confidence 78999999999984
No 24
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.17 E-value=23 Score=20.80 Aligned_cols=14 Identities=21% Similarity=0.249 Sum_probs=12.6
Q ss_pred CHHHHHHHHHhhCc
Q 039077 89 SADCRKQIAESYGF 102 (149)
Q Consensus 89 s~e~R~qlAe~yGf 102 (149)
+.++|.+||++.|.
T Consensus 24 ~~~~~~~LA~~lgL 37 (57)
T d1e3oc1 24 TSEDITLIAEQLNM 37 (57)
T ss_dssp CHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHCC
Confidence 78999999999984
No 25
>d2fsra1 d.108.1.1 (A:4-167) Probable acetyltranferase Atu2435 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=21.81 E-value=16 Score=22.48 Aligned_cols=15 Identities=20% Similarity=-0.024 Sum_probs=12.9
Q ss_pred HHHHHHhhCchhcCC
Q 039077 93 RKQIAESYGFRQIGE 107 (149)
Q Consensus 93 R~qlAe~yGf~qIGe 107 (149)
=.++.|+.||+..|+
T Consensus 135 S~rl~ek~GF~~eg~ 149 (164)
T d2fsra1 135 SAAVAERIGGTLDPL 149 (164)
T ss_dssp HHHHHHHTTCEECTT
T ss_pred HHHHHHHCCCEEeee
Confidence 367899999999887
No 26
>d1ffvc1 d.87.2.1 (C:178-287) Carbon monoxide (CO) dehydrogenase flavoprotein, C-terminal domain {Hydrogenophaga pseudoflava [TaxId: 47421]}
Probab=21.79 E-value=19 Score=22.87 Aligned_cols=17 Identities=24% Similarity=0.286 Sum_probs=15.1
Q ss_pred CHHHHHHHHHhhCchhc
Q 039077 89 SADCRKQIAESYGFRQI 105 (149)
Q Consensus 89 s~e~R~qlAe~yGf~qI 105 (149)
|.|||++|++.+..|.+
T Consensus 86 s~~YR~~l~~~l~~Ral 102 (110)
T d1ffvc1 86 DADYKTAMAGQMVKRAL 102 (110)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 89999999999888754
No 27
>d1pufb_ a.4.1.1 (B:) pbx1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.68 E-value=23 Score=21.55 Aligned_cols=15 Identities=20% Similarity=0.543 Sum_probs=13.3
Q ss_pred CHHHHHHHHHhhCch
Q 039077 89 SADCRKQIAESYGFR 103 (149)
Q Consensus 89 s~e~R~qlAe~yGf~ 103 (149)
++++|.+||++.|..
T Consensus 30 s~~~k~~La~~~gl~ 44 (73)
T d1pufb_ 30 SEEAKEELAKKCGIT 44 (73)
T ss_dssp CHHHHHHHHHHHTSC
T ss_pred CHHHHHHHHHHHCcC
Confidence 799999999999953
No 28
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.55 E-value=24 Score=20.65 Aligned_cols=14 Identities=29% Similarity=0.339 Sum_probs=12.5
Q ss_pred CHHHHHHHHHhhCc
Q 039077 89 SADCRKQIAESYGF 102 (149)
Q Consensus 89 s~e~R~qlAe~yGf 102 (149)
|.++|.+||+..|.
T Consensus 26 ~~~~r~~LA~~l~L 39 (57)
T d2e1oa1 26 SPPERKRLAKMLQL 39 (57)
T ss_dssp CHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHhCC
Confidence 68999999999975
No 29
>d1h72c1 d.14.1.5 (C:5-167) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=21.51 E-value=22 Score=23.94 Aligned_cols=26 Identities=15% Similarity=0.005 Sum_probs=23.8
Q ss_pred CHHHHHHHHHhhCchhcCCCCCCccc
Q 039077 89 SADCRKQIAESYGFRQIGEPLPENVT 114 (149)
Q Consensus 89 s~e~R~qlAe~yGf~qIGe~LPd~VT 114 (149)
|.++..++|.+......|+.-||||.
T Consensus 114 s~~~l~~~A~~~e~~~~g~~~gddv~ 139 (163)
T d1h72c1 114 DKLKLVDYASYGELASSGAKHADNVA 139 (163)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCCTTHH
T ss_pred CHHHHHHHHHHHHHhhcCCCCchHhH
Confidence 78889999999999999999999986
No 30
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}
Probab=21.13 E-value=10 Score=25.83 Aligned_cols=45 Identities=20% Similarity=0.130 Sum_probs=26.4
Q ss_pred CCHHHHHHHHHhhCchhcCCCCCCcccHHHHhhhc----CceeeEeecc
Q 039077 88 DSADCRKQIAESYGFRQIGEPLPENVTMKDVIDSL----PKKVLFLFAS 132 (149)
Q Consensus 88 Ds~e~R~qlAe~yGf~qIGe~LPd~VTLkdVi~sL----PkeVFeidd~ 132 (149)
|..++|.++|+++|....-..-.++-...++.+-+ ..-|||--++
T Consensus 60 d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~G~ 108 (174)
T d1e3ia2 60 DINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGT 108 (174)
T ss_dssp CSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCC
T ss_pred ccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEeccc
Confidence 34678999999999887655444333334444322 3455654443
No 31
>d9anta_ a.4.1.1 (A:) Antennapedia Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=20.88 E-value=25 Score=20.89 Aligned_cols=14 Identities=21% Similarity=0.311 Sum_probs=12.6
Q ss_pred CHHHHHHHHHhhCc
Q 039077 89 SADCRKQIAESYGF 102 (149)
Q Consensus 89 s~e~R~qlAe~yGf 102 (149)
+.++|.+||+++|.
T Consensus 23 ~~~~r~~LA~~l~l 36 (56)
T d9anta_ 23 TRRRRIEIAHALSL 36 (56)
T ss_dssp CHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhCC
Confidence 78999999999984
No 32
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.23 E-value=25 Score=22.51 Aligned_cols=15 Identities=27% Similarity=0.200 Sum_probs=13.1
Q ss_pred CCHHHHHHHHHhhCc
Q 039077 88 DSADCRKQIAESYGF 102 (149)
Q Consensus 88 Ds~e~R~qlAe~yGf 102 (149)
-+.++|.+||+.+|.
T Consensus 52 Ps~~~r~~LA~~l~l 66 (88)
T d1b72a_ 52 LSRARRVEIAATLEL 66 (88)
T ss_dssp CCHHHHHHHHHHHTC
T ss_pred CchHHHHHHHHHcCC
Confidence 379999999999984
No 33
>d2j9ga3 d.142.1.2 (A:115-330) Biotin carboxylase (BC), domain 2 {Escherichia coli [TaxId: 562]}
Probab=20.03 E-value=34 Score=23.48 Aligned_cols=34 Identities=29% Similarity=0.483 Sum_probs=25.6
Q ss_pred eEEEeecCC----CCCCCHHHHHHHHHhhCchhcCCCC
Q 039077 76 QAVAVPVAP----PSEDSADCRKQIAESYGFRQIGEPL 109 (149)
Q Consensus 76 qAVavPVap----pp~Ds~e~R~qlAe~yGf~qIGe~L 109 (149)
+.+-+|+.| .-.++.|+-.+.|+++||-.|=+|.
T Consensus 10 ~~~GvP~vp~~~~~~~~s~dea~~~a~~iG~PvivKp~ 47 (216)
T d2j9ga3 10 KKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKAS 47 (216)
T ss_dssp HHHTCCBCCBCSSCCCSCHHHHHHHHHHHCSSEEEEEE
T ss_pred HHcCcCCCCCCCCCCCCCHHHHHHHHHHcCCCEEEecc
Confidence 344567644 3468999999999999998887763
Done!