BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039079
(123 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2
SV=1
Length = 127
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 66/90 (73%), Gaps = 7/90 (7%)
Query: 23 DLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAML 82
++A RL+ SGG+ +CWN+L ELKSC+NEI +FFLN + + CC ++DII NCWPAML
Sbjct: 35 NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93
Query: 83 TSLGFTAEEGNILRGYC------DASSVPS 106
TSLGFT EE N+LRG+C D+S PS
Sbjct: 94 TSLGFTPEEANVLRGFCQNPNSGDSSPAPS 123
>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2
SV=1
Length = 125
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 65/87 (74%), Gaps = 4/87 (4%)
Query: 23 DLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAML 82
++A RL GG+ +CW++L ELKSC+NEI +FFLN + + + CC A+D+I +CWPAML
Sbjct: 33 NIAARLTG-GGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAML 91
Query: 83 TSLGFTAEEGNILRGYCDASSVPSLGG 109
TSLGFT EE N+LRG+C + P+ GG
Sbjct: 92 TSLGFTLEETNVLRGFCQS---PNSGG 115
>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2
SV=1
Length = 125
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 63/79 (79%), Gaps = 1/79 (1%)
Query: 23 DLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWPAML 82
++A RL GG+ +CWN+L ELKSC+NEI +FFLN + + DCC+A+++I +CWPAML
Sbjct: 33 NIAARLNG-GGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAML 91
Query: 83 TSLGFTAEEGNILRGYCDA 101
TSLGFT++E N+LRG+C +
Sbjct: 92 TSLGFTSDETNVLRGFCQS 110
>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2
SV=1
Length = 158
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 52/82 (63%)
Query: 20 PGYDLATRLEASGGITKCWNSLMELKSCSNEIGIFFLNSQADIDHDCCRAIDIIARNCWP 79
P L RL+ CW+SLM+L+ CS E+ +FFLN + I CC AI I R CWP
Sbjct: 40 PTTSLVYRLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWP 99
Query: 80 AMLTSLGFTAEEGNILRGYCDA 101
M+ LGFTA+EG++L+GYCD
Sbjct: 100 TMIGVLGFTAQEGDMLQGYCDG 121
>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2
SV=1
Length = 155
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 8/85 (9%)
Query: 24 LATRLEASGGITKCWNSLMELKSCSNEIGIFFLNS--------QADIDHDCCRAIDIIAR 75
+AT +G + CWN+ +ELKSC++EI FFL+ + ID DCC AI ++ +
Sbjct: 40 MATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVK 99
Query: 76 NCWPAMLTSLGFTAEEGNILRGYCD 100
+CW M TSLG T EGN LR YC+
Sbjct: 100 DCWSVMFTSLGLTTMEGNNLREYCE 124
>sp|Q04431|KRE28_YEAST Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KRE28 PE=1 SV=1
Length = 385
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 28 LEASGGITKCWNSLMELKSCSNE 50
LEA+G I CW+SL ELK+ +N+
Sbjct: 177 LEATGDIENCWDSLNELKNLTNK 199
>sp|C8Z692|KRE28_YEAS8 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse) GN=KRE28 PE=3
SV=1
Length = 385
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 28 LEASGGITKCWNSLMELKSCSNE 50
LEA+G I CW+SL ELK+ +N+
Sbjct: 177 LEATGDIENCWDSLNELKNLTNK 199
>sp|A6ZZB9|KRE28_YEAS7 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain YJM789) GN=KRE28 PE=3 SV=1
Length = 385
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 28 LEASGGITKCWNSLMELKSCSNE 50
LEA+G I CW+SL ELK+ +N+
Sbjct: 177 LEATGDIENCWDSLNELKNLTNK 199
>sp|B5VH51|KRE28_YEAS6 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain AWRI1631) GN=KRE28 PE=3 SV=1
Length = 385
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 28 LEASGGITKCWNSLMELKSCSNE 50
LEA+G I CW+SL ELK+ +N+
Sbjct: 177 LEATGDIENCWDSLNELKNLTNK 199
>sp|C7GKW3|KRE28_YEAS2 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain JAY291) GN=KRE28 PE=3 SV=1
Length = 385
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 28 LEASGGITKCWNSLMELKSCSNE 50
LEA+G I CW+SL ELK+ +N+
Sbjct: 177 LEATGDIENCWDSLNELKNLTNK 199
>sp|B3LFD9|KRE28_YEAS1 Spindle pole body component KRE28 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=KRE28 PE=3 SV=1
Length = 385
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 28 LEASGGITKCWNSLMELKSCSNE 50
LEA+G I CW+SL ELK+ +N+
Sbjct: 177 LEATGDIENCWDSLNELKNLTNK 199
>sp|O14057|GUAD_SCHPO Probable guanine deaminase OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPCC1672.03c PE=3 SV=1
Length = 527
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 43 ELKSCSNEIGIFFLNSQ-----ADIDHDCCRAIDIIARNCWPAMLTSLGFTAEEGNI 94
E+ S +++G F + D+ + +DI R+ WP ML+ FT+++ N+
Sbjct: 378 EVVSRGDQVGSFAVGKYWDALIVDLSAETHSCVDIFERDTWPVMLSKWVFTSDDRNL 434
>sp|Q47BL9|OTC_DECAR Ornithine carbamoyltransferase OS=Dechloromonas aromatica (strain
RCB) GN=argF PE=3 SV=1
Length = 306
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Query: 65 DCCRAIDIIARNCWPAMLTSLGFTAEEGNILRGYCD 100
D CR D++ + W TS+GF AE ++ + D
Sbjct: 209 DACRGADLVTTDVW----TSMGFEAENEERIKAFAD 240
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,785,411
Number of Sequences: 539616
Number of extensions: 1481696
Number of successful extensions: 3400
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3387
Number of HSP's gapped (non-prelim): 18
length of query: 123
length of database: 191,569,459
effective HSP length: 90
effective length of query: 33
effective length of database: 143,004,019
effective search space: 4719132627
effective search space used: 4719132627
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)