BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039082
(472 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 150/274 (54%), Gaps = 24/274 (8%)
Query: 196 EIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF 255
+++++EKIG G+ ++RA W G DVAVK + FH V F +EV + R RH
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAER--VNEFLREVAIMKRLRHPN 95
Query: 256 VLQLMGACLEPPYRGWLVTELLGT-TLKEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
++ MGA +PP +VTE L +L LH G++ + + RL+ A ++A
Sbjct: 96 IVLFMGAVTQPPNLS-IVTEYLSRGSLYRLLHKSGAREQLDE-------RRRLSMAYDVA 147
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-----FLSDGEMALTGTFVY 369
+ M YLH + P ++HR+LK N+ +D V++ DFG +R FLS A GT +
Sbjct: 148 KGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA--GTPEW 205
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALPEE 429
MAPEV++ EP +EKSDVYSFG+IL E+ T P+ + PA++ VG R +P
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW--GNLNPAQVVAAVGFKCKRLEIPRN 263
Query: 430 -DGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
+ Q+ +IE W + RPSF++I L+
Sbjct: 264 LNPQVAAIIE---GCWTNEPWKRPSFATIMDLLR 294
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 149/274 (54%), Gaps = 24/274 (8%)
Query: 196 EIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF 255
+++++EKIG G+ ++RA W G DVAVK + FH V F +EV + R RH
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAER--VNEFLREVAIMKRLRHPN 95
Query: 256 VLQLMGACLEPPYRGWLVTELLGT-TLKEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
++ MGA +PP +VTE L +L LH G++ + + RL+ A ++A
Sbjct: 96 IVLFMGAVTQPPNLS-IVTEYLSRGSLYRLLHKSGAREQLDE-------RRRLSMAYDVA 147
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-----FLSDGEMALTGTFVY 369
+ M YLH + P ++HRDLK N+ +D V++ DFG +R FL A GT +
Sbjct: 148 KGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA--GTPEW 205
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALPEE 429
MAPEV++ EP +EKSDVYSFG+IL E+ T P+ + PA++ VG R +P
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW--GNLNPAQVVAAVGFKCKRLEIPRN 263
Query: 430 -DGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
+ Q+ +IE W + RPSF++I L+
Sbjct: 264 LNPQVAAIIE---GCWTNEPWKRPSFATIMDLLR 294
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 138/273 (50%), Gaps = 28/273 (10%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
ID KEI+++E +G+G + +A WR DVA+K I +E+ F E+ LSR
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQI------ESESERKAFIVELRQLSRV 58
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPF--EERLA 308
H +++L GACL P LV E G +L LHG PLP + ++
Sbjct: 59 NHPNIVKLYGACLNPVC---LVMEYAEGGSLYNVLHGAE---------PLPYYTAAHAMS 106
Query: 309 RALEIAQAMQYLHEQKPK-VIHRDLKPSNIFLDDAKHV-RIADFGHARFLSDGEMALTGT 366
L+ +Q + YLH +PK +IHRDLKP N+ L V +I DFG A + G+
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGS 166
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPAL 426
+MAPEV + YSEK DV+S+GIIL E+IT P+ E +I V G RP L
Sbjct: 167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT-RPPL 225
Query: 427 PEEDGQLRELIE-LICLSWDGDASVRPSFSSIT 458
+ L + IE L+ W D S RPS I
Sbjct: 226 IK---NLPKPIESLMTRCWSKDPSQRPSMEEIV 255
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 138/273 (50%), Gaps = 28/273 (10%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
ID KEI+++E +G+G + +A WR DVA+K I +E+ F E+ LSR
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQI------ESESERKAFIVELRQLSRV 59
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPF--EERLA 308
H +++L GACL P LV E G +L LHG PLP + ++
Sbjct: 60 NHPNIVKLYGACLNPVC---LVMEYAEGGSLYNVLHGAE---------PLPYYTAAHAMS 107
Query: 309 RALEIAQAMQYLHEQKPK-VIHRDLKPSNIFLDDAKHV-RIADFGHARFLSDGEMALTGT 366
L+ +Q + YLH +PK +IHRDLKP N+ L V +I DFG A + G+
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGS 167
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPAL 426
+MAPEV + YSEK DV+S+GIIL E+IT P+ E +I V G RP L
Sbjct: 168 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT-RPPL 226
Query: 427 PEEDGQLRELIE-LICLSWDGDASVRPSFSSIT 458
+ L + IE L+ W D S RPS I
Sbjct: 227 IK---NLPKPIESLMTRCWSKDPSQRPSMEEIV 256
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 150/294 (51%), Gaps = 31/294 (10%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+ W I +I + ++IG G+ +Y+ W G DVAVK + + + F EV
Sbjct: 5 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKML--NVTAPTPQQLQAFKNEVGV 61
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEER 306
L + RH +L MG +P +VT+ G++L LH ++ ++++ +
Sbjct: 62 LRKTRHVNILLFMGYSTKPQLA--IVTQWCEGSSLYHHLHASETKFEMKKLIDI------ 113
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA---- 362
A + A+ M YLH + +IHRDLK +NIFL + V+I DFG A S +
Sbjct: 114 ---ARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE 168
Query: 363 -LTGTFVYMAPEVIQCE---PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVG 418
L+G+ ++MAPEVI+ + PYS +SDVY+FGI+L E++TG PY + + I M VG
Sbjct: 169 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM-VG 227
Query: 419 EGKLRPALPEEDGQLRELIELI---CLSWDGDASVRPSFSSITCSLKNIQMKVT 469
G L P L + + ++ + CL D RPSF I ++ + +++
Sbjct: 228 RGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDE--RPSFPRILAEIEELARELS 279
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 153/299 (51%), Gaps = 31/299 (10%)
Query: 183 SQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFA 242
S+ + W I +I + ++IG G+ +Y+ W G DVAVK + + + F
Sbjct: 12 SRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKML--NVTAPTPQQLQAFK 68
Query: 243 QEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLP 301
EV L + RH +L MG +P +VT+ G++L LH ++ ++++ +
Sbjct: 69 NEVGVLRKTRHVNILLFMGYSTKPQLA--IVTQWCEGSSLYHHLHASETKFEMKKLIDI- 125
Query: 302 PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA----RFLS 357
A + A+ M YLH + +IHRDLK +NIFL + V+I DFG A R+
Sbjct: 126 --------ARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175
Query: 358 DGEMA-LTGTFVYMAPEVIQCE---PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKI 413
+ L+G+ ++MAPEVI+ + PYS +SDVY+FGI+L E++TG PY + + I
Sbjct: 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 235
Query: 414 AMEVGEGKLRPALPEEDGQLRELIELI---CLSWDGDASVRPSFSSITCSLKNIQMKVT 469
M VG G L P L + + ++ + CL D RPSF I ++ + +++
Sbjct: 236 EM-VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDE--RPSFPRILAEIEELARELS 291
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 149/294 (50%), Gaps = 31/294 (10%)
Query: 183 SQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFA 242
S+ + W I +I + ++IG G+ +Y+ W G DVAVK + + + F
Sbjct: 12 SRDAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKML--NVTAPTPQQLQAFK 68
Query: 243 QEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLP 301
EV L + RH +L MG P +VT+ G++L LH ++ ++++ +
Sbjct: 69 NEVGVLRKTRHVNILLFMGYSTAPQLA--IVTQWCEGSSLYHHLHASETKFEMKKLIDI- 125
Query: 302 PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA----RFLS 357
A + A+ M YLH + +IHRDLK +NIFL + V+I DFG A R+
Sbjct: 126 --------ARQTARGMDYLHAKS--IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175
Query: 358 DGEMA-LTGTFVYMAPEVIQCE---PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKI 413
+ L+G+ ++MAPEVI+ + PYS +SDVY+FGI+L E++TG PY + + I
Sbjct: 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII 235
Query: 414 AMEVGEGKLRPALPEEDGQLRELIELI---CLSWDGDASVRPSFSSITCSLKNI 464
M VG G L P L + + ++ + CL D RPSF I ++ +
Sbjct: 236 EM-VGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDE--RPSFPRILAEIEEL 286
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 146/287 (50%), Gaps = 31/287 (10%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+ W I +I + ++IG G+ +Y+ W G DVAVK + + + F EV
Sbjct: 28 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKML--NVTAPTPQQLQAFKNEVGV 84
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEER 306
L + RH +L MG +P +VT+ G++L LH + ++ +++ +
Sbjct: 85 LRKTRHVNILLFMGYSTKPQLA--IVTQWCEGSSLYHHLHIIETKFEMIKLIDI------ 136
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA---- 362
A + AQ M YLH + +IHRDLK +NIFL + V+I DFG A S +
Sbjct: 137 ---ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 191
Query: 363 -LTGTFVYMAPEVIQCE---PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVG 418
L+G+ ++MAPEVI+ + PYS +SDVY+FGI+L E++TG PY + + I M VG
Sbjct: 192 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM-VG 250
Query: 419 EGKLRPALPEEDGQLRELIELI---CLSWDGDASVRPSFSSITCSLK 462
G L P L + + ++ + CL D RP F I S++
Sbjct: 251 RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE--RPLFPQILASIE 295
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 146/287 (50%), Gaps = 31/287 (10%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+ W I +I + ++IG G+ +Y+ W G DVAVK + + + F EV
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKML--NVTAPTPQQLQAFKNEVGV 85
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEER 306
L + RH +L MG +P +VT+ G++L LH + ++ +++ +
Sbjct: 86 LRKTRHVNILLFMGYSTKPQLA--IVTQWCEGSSLYHHLHIIETKFEMIKLIDI------ 137
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA---- 362
A + AQ M YLH + +IHRDLK +NIFL + V+I DFG A S +
Sbjct: 138 ---ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 192
Query: 363 -LTGTFVYMAPEVIQCE---PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVG 418
L+G+ ++MAPEVI+ + PYS +SDVY+FGI+L E++TG PY + + I M VG
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM-VG 251
Query: 419 EGKLRPALPEEDGQLRELIELI---CLSWDGDASVRPSFSSITCSLK 462
G L P L + + ++ + CL D RP F I S++
Sbjct: 252 RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE--RPLFPQILASIE 296
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 146/287 (50%), Gaps = 31/287 (10%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+ W I +I + ++IG G+ +Y+ W G DVAVK + + + F EV
Sbjct: 3 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKML--NVTAPTPQQLQAFKNEVGV 59
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEER 306
L + RH +L MG +P +VT+ G++L LH + ++ +++ +
Sbjct: 60 LRKTRHVNILLFMGYSTKPQLA--IVTQWCEGSSLYHHLHIIETKFEMIKLIDI------ 111
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA---- 362
A + AQ M YLH + +IHRDLK +NIFL + V+I DFG A S +
Sbjct: 112 ---ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 166
Query: 363 -LTGTFVYMAPEVIQCE---PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVG 418
L+G+ ++MAPEVI+ + PYS +SDVY+FGI+L E++TG PY + + I M VG
Sbjct: 167 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM-VG 225
Query: 419 EGKLRPALPEEDGQLRELIELI---CLSWDGDASVRPSFSSITCSLK 462
G L P L + + ++ + CL D RP F I S++
Sbjct: 226 RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE--RPLFPQILASIE 270
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 146/287 (50%), Gaps = 31/287 (10%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+ W I +I + ++IG G+ +Y+ W G DVAVK + + + F EV
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKML--NVTAPTPQQLQAFKNEVGV 62
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEER 306
L + RH +L MG +P +VT+ G++L LH + ++ +++ +
Sbjct: 63 LRKTRHVNILLFMGYSTKPQLA--IVTQWCEGSSLYHHLHIIETKFEMIKLIDI------ 114
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA---- 362
A + AQ M YLH + +IHRDLK +NIFL + V+I DFG A S +
Sbjct: 115 ---ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 363 -LTGTFVYMAPEVIQCE---PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVG 418
L+G+ ++MAPEVI+ + PYS +SDVY+FGI+L E++TG PY + + I M VG
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM-VG 228
Query: 419 EGKLRPALPEEDGQLRELIELI---CLSWDGDASVRPSFSSITCSLK 462
G L P L + + ++ + CL D RP F I S++
Sbjct: 229 RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE--RPLFPQILASIE 273
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 146/287 (50%), Gaps = 31/287 (10%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+ W I +I + ++IG G+ +Y+ W G DVAVK + + + F EV
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKML--NVTAPTPQQLQAFKNEVGV 57
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEER 306
L + RH +L MG +P +VT+ G++L LH + ++ +++ +
Sbjct: 58 LRKTRHVNILLFMGYSTKPQLA--IVTQWCEGSSLYHHLHIIETKFEMIKLIDI------ 109
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA---- 362
A + AQ M YLH + +IHRDLK +NIFL + V+I DFG A S +
Sbjct: 110 ---ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 363 -LTGTFVYMAPEVIQCE---PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVG 418
L+G+ ++MAPEVI+ + PYS +SDVY+FGI+L E++TG PY + + I M VG
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM-VG 223
Query: 419 EGKLRPALPEEDGQLRELIELI---CLSWDGDASVRPSFSSITCSLK 462
G L P L + + ++ + CL D RP F I S++
Sbjct: 224 RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE--RPLFPQILASIE 268
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 146/287 (50%), Gaps = 31/287 (10%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+ W I +I + ++IG G+ +Y+ W G DVAVK + + + F EV
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKML--NVTAPTPQQLQAFKNEVGV 62
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEER 306
L + RH +L MG +P +VT+ G++L LH + ++ +++ +
Sbjct: 63 LRKTRHVNILLFMGYSTKPQLA--IVTQWCEGSSLYHHLHIIETKFEMIKLIDI------ 114
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA---- 362
A + AQ M YLH + +IHRDLK +NIFL + V+I DFG A S +
Sbjct: 115 ---ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 169
Query: 363 -LTGTFVYMAPEVIQCE---PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVG 418
L+G+ ++MAPEVI+ + PYS +SDVY+FGI+L E++TG PY + + I M VG
Sbjct: 170 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM-VG 228
Query: 419 EGKLRPALPEEDGQLRELIELI---CLSWDGDASVRPSFSSITCSLK 462
G L P L + + ++ + CL D RP F I S++
Sbjct: 229 RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE--RPLFPQILASIE 273
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 147/287 (51%), Gaps = 31/287 (10%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+ W I +I + ++IG G+ +Y+ W G DVAVK + + + F EV
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKML--NVTAPTPQQLQAFKNEVGV 85
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEER 306
L + RH +L MG +P +VT+ G++L LH + ++ +++ +
Sbjct: 86 LRKTRHVNILLFMGYSTKPQLA--IVTQWCEGSSLYHHLHIIETKFEMIKLIDI------ 137
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA----RFLSDGEMA 362
A + AQ M YLH + +IHRDLK +NIFL + V+I DFG A R+ +
Sbjct: 138 ---ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 192
Query: 363 -LTGTFVYMAPEVIQCE---PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVG 418
L+G+ ++MAPEVI+ + PYS +SDVY+FGI+L E++TG PY + + I M VG
Sbjct: 193 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM-VG 251
Query: 419 EGKLRPALPEEDGQLRELIELI---CLSWDGDASVRPSFSSITCSLK 462
G L P L + + ++ + CL D RP F I S++
Sbjct: 252 RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE--RPLFPQILASIE 296
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 147/287 (51%), Gaps = 31/287 (10%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+ W I +I + ++IG G+ +Y+ W G DVAVK + + + F EV
Sbjct: 21 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKML--NVTAPTPQQLQAFKNEVGV 77
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEER 306
L + RH +L MG +P +VT+ G++L LH + ++ +++ +
Sbjct: 78 LRKTRHVNILLFMGYSTKPQLA--IVTQWCEGSSLYHHLHIIETKFEMIKLIDI------ 129
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA----RFLSDGEMA 362
A + AQ M YLH + +IHRDLK +NIFL + V+I DFG A R+ +
Sbjct: 130 ---ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 184
Query: 363 -LTGTFVYMAPEVIQCE---PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVG 418
L+G+ ++MAPEVI+ + PYS +SDVY+FGI+L E++TG PY + + I M VG
Sbjct: 185 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM-VG 243
Query: 419 EGKLRPALPEEDGQLRELIELI---CLSWDGDASVRPSFSSITCSLK 462
G L P L + + ++ + CL D RP F I S++
Sbjct: 244 RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE--RPLFPQILASIE 288
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 145/287 (50%), Gaps = 31/287 (10%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+ W I +I + ++IG G+ +Y+ W G DVAVK + + + F EV
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKML--NVTAPTPQQLQAFKNEVGV 57
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEER 306
L + RH +L MG P +VT+ G++L LH + ++ +++ +
Sbjct: 58 LRKTRHVNILLFMGYSTAPQLA--IVTQWCEGSSLYHHLHIIETKFEMIKLIDI------ 109
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA---- 362
A + AQ M YLH + +IHRDLK +NIFL + V+I DFG A S +
Sbjct: 110 ---ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFE 164
Query: 363 -LTGTFVYMAPEVIQCE---PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVG 418
L+G+ ++MAPEVI+ + PYS +SDVY+FGI+L E++TG PY + + I M VG
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM-VG 223
Query: 419 EGKLRPALPEEDGQLRELIELI---CLSWDGDASVRPSFSSITCSLK 462
G L P L + + ++ + CL D RP F I S++
Sbjct: 224 RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE--RPLFPQILASIE 268
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/287 (32%), Positives = 147/287 (51%), Gaps = 31/287 (10%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+ W I +I + ++IG G+ +Y+ W G DVAVK + + + F EV
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKML--NVTAPTPQQLQAFKNEVGV 57
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEER 306
L + RH +L MG +P +VT+ G++L LH + ++ +++ +
Sbjct: 58 LRKTRHVNILLFMGYSTKPQLA--IVTQWCEGSSLYHHLHIIETKFEMIKLIDI------ 109
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA----RFLSDGEMA 362
A + AQ M YLH + +IHRDLK +NIFL + V+I DFG A R+ +
Sbjct: 110 ---ARQTAQGMDYLHAKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE 164
Query: 363 -LTGTFVYMAPEVIQCE---PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVG 418
L+G+ ++MAPEVI+ + PYS +SDVY+FGI+L E++TG PY + + I M VG
Sbjct: 165 QLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM-VG 223
Query: 419 EGKLRPALPEEDGQLRELIELI---CLSWDGDASVRPSFSSITCSLK 462
G L P L + + ++ + CL D RP F I S++
Sbjct: 224 RGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE--RPLFPQILASIE 268
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 139/283 (49%), Gaps = 25/283 (8%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
ID E+ L+E IG G +YRA W G +VAVK D + QE +
Sbjct: 4 IDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML 63
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL 311
+H ++ L G CL+ P ++ G L L G +R +PP + + A+
Sbjct: 64 KHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG----KR------IPP-DILVNWAV 112
Query: 312 EIAQAMQYLHEQK-PKVIHRDLKPSNIFLD--------DAKHVRIADFGHAR-FLSDGEM 361
+IA+ M YLH++ +IHRDLK SNI + K ++I DFG AR + +M
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM 172
Query: 362 ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGK 421
+ G + +MAPEVI+ +S+ SDV+S+G++L E++TG P+ D +A+ G
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID----GLAVAYGVAM 228
Query: 422 LRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ ALP +L+ W+ D RPSF++I L I
Sbjct: 229 NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/251 (35%), Positives = 129/251 (51%), Gaps = 36/251 (14%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCI-----YPDFFHTNENAVTFFAQE 244
W I+ E+ L +IG G+ +Y+ W G DVAVK + P+ F F E
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQA-------FRNE 82
Query: 245 VDTLSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPF 303
V L + RH +L MG + +VT+ G++L + LH Q K +M L
Sbjct: 83 VAVLRKTRHVNILLFMGYMTKDNLA--IVTQWCEGSSLYKHLH---VQETKFQMFQL--- 134
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEM 361
+ A + AQ M YLH + +IHRD+K +NIFL + V+I DFG A S G
Sbjct: 135 ---IDIARQTAQGMDYLHAKN--IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189
Query: 362 AL---TGTFVYMAPEVIQCE---PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAM 415
+ TG+ ++MAPEVI+ + P+S +SDVYS+GI+L E++TG PY + + I M
Sbjct: 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM 249
Query: 416 EVGEGKLRPAL 426
VG G P L
Sbjct: 250 -VGRGYASPDL 259
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 138/282 (48%), Gaps = 27/282 (9%)
Query: 196 EIDLQEKIGQGTTANIY--RAIWRGLDVAVKC-IYPDFFHTNENAVTF--FAQEVDTLSR 250
EI+ +++IG+G ++ R + VA+K I D E F F +EV +S
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 251 QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARA 310
H +++L G PP +V E + G R ++ P+ + +L
Sbjct: 80 LNHPNIVKLYGLMHNPPR---MVMEFVPC-------GDLYHRLLDKAHPIK-WSVKLRLM 128
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHV--RIADFGHARFLSDGEMALTG 365
L+IA ++Y+ Q P ++HRDL+ NIFL D+ V ++ADFG ++ L G
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLG 188
Query: 366 TFVYMAPEVIQCE--PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLR 423
F +MAPE I E Y+EK+D YSF +IL I+TG P+ E Y K + E LR
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR 248
Query: 424 PALPEE-DGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P +PE+ +LR +IE L W GD RP FS I L +
Sbjct: 249 PTIPEDCPPRLRNVIE---LCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 138/282 (48%), Gaps = 27/282 (9%)
Query: 196 EIDLQEKIGQGTTANIY--RAIWRGLDVAVKC-IYPDFFHTNENAVTF--FAQEVDTLSR 250
EI+ +++IG+G ++ R + VA+K I D E F F +EV +S
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 251 QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARA 310
H +++L G PP +V E + G R ++ P+ + +L
Sbjct: 80 LNHPNIVKLYGLMHNPPR---MVMEFVPC-------GDLYHRLLDKAHPIK-WSVKLRLM 128
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHV--RIADFGHARFLSDGEMALTG 365
L+IA ++Y+ Q P ++HRDL+ NIFL D+ V ++ADFG ++ L G
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLG 188
Query: 366 TFVYMAPEVIQCE--PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLR 423
F +MAPE I E Y+EK+D YSF +IL I+TG P+ E Y K + E LR
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR 248
Query: 424 PALPEE-DGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P +PE+ +LR +IE L W GD RP FS I L +
Sbjct: 249 PTIPEDCPPRLRNVIE---LCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/282 (32%), Positives = 137/282 (48%), Gaps = 27/282 (9%)
Query: 196 EIDLQEKIGQGTTANIY--RAIWRGLDVAVKC-IYPDFFHTNENAVTF--FAQEVDTLSR 250
EI+ +++IG+G ++ R + VA+K I D E F F +EV +S
Sbjct: 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 251 QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARA 310
H +++L G PP +V E + G R ++ P+ + +L
Sbjct: 80 LNHPNIVKLYGLMHNPPR---MVMEFVPC-------GDLYHRLLDKAHPIK-WSVKLRLM 128
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHV--RIADFGHARFLSDGEMALTG 365
L+IA ++Y+ Q P ++HRDL+ NIFL D+ V ++ADF ++ L G
Sbjct: 129 LDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLG 188
Query: 366 TFVYMAPEVIQCE--PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLR 423
F +MAPE I E Y+EK+D YSF +IL I+TG P+ E Y K + E LR
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR 248
Query: 424 PALPEE-DGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P +PE+ +LR +IE L W GD RP FS I L +
Sbjct: 249 PTIPEDCPPRLRNVIE---LCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 140/279 (50%), Gaps = 29/279 (10%)
Query: 187 MNGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQE 244
++ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 3 LDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKE 57
Query: 245 VDTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPF 303
+ +H ++QL+G C EPP+ +++TE + T L L R+E +
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQEVSAVV--- 110
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMA 362
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 111 --LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 166
Query: 363 LTGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVG 418
G + APE + +S KSDV++FG++L EI T G PY D P+++ E+
Sbjct: 167 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--PSQV-YELL 223
Query: 419 EGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
E R PE G ++ EL+ W + S RPSF+ I
Sbjct: 224 EKDYRMERPE--GCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 140/279 (50%), Gaps = 29/279 (10%)
Query: 187 MNGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQE 244
++ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKE 57
Query: 245 VDTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPF 303
+ +H ++QL+G C EPP+ +++TE + T L L R+E +
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQEVSAVV--- 110
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMA 362
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 111 --LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTA 166
Query: 363 LTGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVG 418
G + APE + +S KSDV++FG++L EI T G PY D P+++ E+
Sbjct: 167 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--PSQV-YELL 223
Query: 419 EGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
E R PE G ++ EL+ W + S RPSF+ I
Sbjct: 224 EKDYRMERPE--GCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 142/298 (47%), Gaps = 51/298 (17%)
Query: 179 AVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNEN 236
A+ S + W ++ +I ++ K+G G +Y +W+ L VAVK + D E
Sbjct: 2 AMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE- 60
Query: 237 AVTFFAQEVDTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKE 295
F +E + +H ++QL+G C EPP+ +++TE + T L L R+E
Sbjct: 61 ----FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQE 112
Query: 296 RMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
+ L A +I+ AM+YL +K IHRDL N + + V++ADFG +R
Sbjct: 113 VNAVV-----LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
Query: 356 LS-DGEMALTGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY------- 403
++ D A G + APE + +S KSDV++FG++L EI T G PY
Sbjct: 166 MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+EKDY+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 226 VYELLEKDYR-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 142/298 (47%), Gaps = 51/298 (17%)
Query: 179 AVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNEN 236
A+ S + W ++ +I ++ K+G G +Y +W+ L VAVK + D E
Sbjct: 2 AMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE- 60
Query: 237 AVTFFAQEVDTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKE 295
F +E + +H ++QL+G C EPP+ +++TE + T L L R+E
Sbjct: 61 ----FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQE 112
Query: 296 RMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
+ L A +I+ AM+YL +K IHRDL N + + V++ADFG +R
Sbjct: 113 VSAVV-----LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
Query: 356 LS-DGEMALTGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY------- 403
++ D A G + APE + +S KSDV++FG++L EI T G PY
Sbjct: 166 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+EKDY+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 226 VYELLEKDYR-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 267
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 142/298 (47%), Gaps = 51/298 (17%)
Query: 179 AVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNEN 236
A+ S + W ++ +I ++ K+G G +Y +W+ L VAVK + D E
Sbjct: 2 AMDPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE- 60
Query: 237 AVTFFAQEVDTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKE 295
F +E + +H ++QL+G C EPP+ +++TE + T L L R+E
Sbjct: 61 ----FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQE 112
Query: 296 RMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
+ L A +I+ AM+YL +K IHRDL N + + V++ADFG +R
Sbjct: 113 VNAVV-----LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRL 165
Query: 356 LS-DGEMALTGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY------- 403
++ D A G + APE + +S KSDV++FG++L EI T G PY
Sbjct: 166 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+EKDY+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 226 VYELLEKDYR-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 267
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 139/279 (49%), Gaps = 29/279 (10%)
Query: 187 MNGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQE 244
++ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKE 57
Query: 245 VDTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPF 303
+ +H ++QL+G C EPP+ +++ E + T L L R+E +
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFM--TYGNLLDYLRECNRQEVSAVV--- 110
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMA 362
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 111 --LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 166
Query: 363 LTGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVG 418
G + APE + +S KSDV++FG++L EI T G PY D P+++ E+
Sbjct: 167 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--PSQV-YELL 223
Query: 419 EGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
E R PE G ++ EL+ W + S RPSF+ I
Sbjct: 224 EKDYRMERPE--GCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 139/289 (48%), Gaps = 51/289 (17%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEV 245
+ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEA 60
Query: 246 DTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H ++QL+G C EPP+ +++TE + T L L R+E +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQEVSAVV---- 112
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMAL 363
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 113 -LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----------IEKDY 408
G + APE + +S KSDV++FG++L EI T G PY +EKDY
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 230 R-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 262
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 140/294 (47%), Gaps = 51/294 (17%)
Query: 183 SQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTF 240
S + W ++ +I ++ K+G G +Y +W+ L VAVK + D E
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----- 60
Query: 241 FAQEVDTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVP 299
F +E + +H ++QL+G C EPP+ +++TE + T L L R+E
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQEVNAV 116
Query: 300 LPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-D 358
+ L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D
Sbjct: 117 V-----LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
Query: 359 GEMALTGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY----------- 403
A G + APE + +S KSDV++FG++L EI T G PY
Sbjct: 170 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 229
Query: 404 IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+EKDY+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 230 LEKDYR-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 139/289 (48%), Gaps = 51/289 (17%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEV 245
+ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEA 60
Query: 246 DTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H ++QL+G C EPP+ +++TE + T L L R+E +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQEVSAVV---- 112
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMAL 363
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 113 -LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----------IEKDY 408
G + APE + +S KSDV++FG++L EI T G PY +EKDY
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 230 R-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 262
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 139/289 (48%), Gaps = 51/289 (17%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEV 245
+ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEA 61
Query: 246 DTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H ++QL+G C EPP+ +++TE + T L L R+E +
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQEVNAVV---- 113
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMAL 363
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 114 -LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAP 170
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----------IEKDY 408
G + APE + +S KSDV++FG++L EI T G PY +EKDY
Sbjct: 171 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 230
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 231 R-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 263
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 139/289 (48%), Gaps = 51/289 (17%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEV 245
+ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEA 62
Query: 246 DTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H ++QL+G C EPP+ +++TE + T L L R+E +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQEVNAVV---- 114
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMAL 363
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 115 -LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 171
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----------IEKDY 408
G + APE + +S KSDV++FG++L EI T G PY +EKDY
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 231
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 232 R-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 264
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 139/289 (48%), Gaps = 51/289 (17%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEV 245
+ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEA 62
Query: 246 DTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H ++QL+G C EPP+ +++TE + T L L R+E +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQEVNAVV---- 114
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMAL 363
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 115 -LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAP 171
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----------IEKDY 408
G + APE + +S KSDV++FG++L EI T G PY +EKDY
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 231
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 232 R-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 264
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 139/289 (48%), Gaps = 51/289 (17%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEV 245
+ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEA 62
Query: 246 DTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H ++QL+G C EPP+ +++TE + T L L R+E +
Sbjct: 63 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQEVNAVV---- 114
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMAL 363
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 115 -LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 171
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----------IEKDY 408
G + APE + +S KSDV++FG++L EI T G PY +EKDY
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 231
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 232 R-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 139/289 (48%), Gaps = 51/289 (17%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEV 245
+ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 19 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEA 73
Query: 246 DTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H ++QL+G C EPP+ +++TE + T L L R+E +
Sbjct: 74 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQEVNAVV---- 125
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMAL 363
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 126 -LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 182
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----------IEKDY 408
G + APE + +S KSDV++FG++L EI T G PY +EKDY
Sbjct: 183 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 242
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 243 R-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 275
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 139/289 (48%), Gaps = 51/289 (17%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEV 245
+ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEA 60
Query: 246 DTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H ++QL+G C EPP+ +++TE + T L L R+E +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQEVNAVV---- 112
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMAL 363
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 113 -LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----------IEKDY 408
G + APE + +S KSDV++FG++L EI T G PY +EKDY
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 230 R-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 262
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 138/287 (48%), Gaps = 51/287 (17%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 215 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAV 269
Query: 248 LSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER 306
+ +H ++QL+G C EPP+ +++TE + T L L R+E +
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQEVSAVV-----L 320
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMALTG 365
L A +I+ AM+YL +K IHR+L N + + V++ADFG +R ++ D A G
Sbjct: 321 LYMATQISSAMEYL--EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAG 378
Query: 366 T---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----------IEKDYKP 410
+ APE + +S KSDV++FG++L EI T G PY +EKDY+
Sbjct: 379 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR- 437
Query: 411 AKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 438 ----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 469
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 139/289 (48%), Gaps = 51/289 (17%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEV 245
+ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 10 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEA 64
Query: 246 DTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H ++QL+G C EPP+ +++TE + T L L R+E +
Sbjct: 65 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQEVNAVV---- 116
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMAL 363
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 117 -LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 173
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----------IEKDY 408
G + APE + +S KSDV++FG++L EI T G PY +EKDY
Sbjct: 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 233
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 234 R-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 266
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 139/288 (48%), Gaps = 53/288 (18%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 212 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAV 266
Query: 248 LSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKE-RMVPLPPFEE 305
+ +H ++QL+G C EPP+ +++TE + T L L R+E V L
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQEVNAVVL----- 317
Query: 306 RLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMALT 364
L A +I+ AM+YL +K IHR+L N + + V++ADFG +R ++ D A
Sbjct: 318 -LYMATQISSAMEYL--EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 374
Query: 365 GT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----------IEKDYK 409
G + APE + +S KSDV++FG++L EI T G PY +EKDY+
Sbjct: 375 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR 434
Query: 410 PAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 435 -----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 466
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 139/289 (48%), Gaps = 51/289 (17%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEV 245
+ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEA 60
Query: 246 DTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H ++QL+G C EPP+ +++TE + T L L R+E +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQEVNAVV---- 112
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMAL 363
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 113 -LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----------IEKDY 408
G + APE + +S KSDV++FG++L EI T G PY +EKDY
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 230 R-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 262
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 137/280 (48%), Gaps = 23/280 (8%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+GW ++ KE+ L + IG+G ++ +RG VAVKCI N+ F E
Sbjct: 14 SGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI------KNDATAQAFLAEASV 67
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHGLGSQRRKERMVPLPPFEER 306
+++ RH ++QL+G +E ++VTE + +L ++L G +
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-------- 119
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT 366
L +L++ +AM+YL + +HRDL N+ + + +++DFG + S +
Sbjct: 120 LKFSLDVCEAMEYL--EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 177
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ APE ++ + +S KSDV+SFGI+L EI + G PY K +E G P
Sbjct: 178 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP- 236
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQ 465
DG + E++ W DA++RPSF + L++I+
Sbjct: 237 ----DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 139/288 (48%), Gaps = 53/288 (18%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 254 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEAAV 308
Query: 248 LSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKE-RMVPLPPFEE 305
+ +H ++QL+G C EPP+ +++TE + T L L R+E V L
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPF--YIITEFM--TYGNLLDYLRECNRQEVNAVVL----- 359
Query: 306 RLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMALT 364
L A +I+ AM+YL +K IHR+L N + + V++ADFG +R ++ D A
Sbjct: 360 -LYMATQISSAMEYL--EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 416
Query: 365 GT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----------IEKDYK 409
G + APE + +S KSDV++FG++L EI T G PY +EKDY+
Sbjct: 417 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR 476
Query: 410 PAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 477 -----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 508
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 136/280 (48%), Gaps = 23/280 (8%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+GW ++ KE+ L + IG+G ++ +RG VAVKCI N+ F E
Sbjct: 5 SGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI------KNDATAQAFLAEASV 58
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHGLGSQRRKERMVPLPPFEER 306
+++ RH ++QL+G +E ++VTE + +L ++L G +
Sbjct: 59 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-------- 110
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT 366
L +L++ +AM+YL + +HRDL N+ + + +++DFG + S +
Sbjct: 111 LKFSLDVCEAMEYL--EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 168
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ APE ++ +S KSDV+SFGI+L EI + G PY K +E G P
Sbjct: 169 VKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP- 227
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQ 465
DG + E++ W DA++RPSF + L++I+
Sbjct: 228 ----DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 263
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 139/294 (47%), Gaps = 51/294 (17%)
Query: 183 SQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTF 240
S + W ++ +I ++ K+G G +Y +W+ L VAVK + D E
Sbjct: 6 SSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----- 60
Query: 241 FAQEVDTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVP 299
F +E + +H ++QL+G C EPP+ +++ E + T L L R+E
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPF--YIIIEFM--TYGNLLDYLRECNRQEVNAV 116
Query: 300 LPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-D 358
+ L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D
Sbjct: 117 V-----LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
Query: 359 GEMALTGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY----------- 403
A G + APE + +S KSDV++FG++L EI T G PY
Sbjct: 170 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL 229
Query: 404 IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+EKDY+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 230 LEKDYR-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 138/289 (47%), Gaps = 51/289 (17%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEV 245
+ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEA 61
Query: 246 DTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H ++QL+G C EPP+ +++ E + T L L R+E +
Sbjct: 62 AVMKEIKHPNLVQLLGVCTREPPF--YIIIEFM--TYGNLLDYLRECNRQEVNAVV---- 113
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMAL 363
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 114 -LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAH 170
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----------IEKDY 408
G + APE + +S KSDV++FG++L EI T G PY +EKDY
Sbjct: 171 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 230
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 231 R-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 263
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 138/289 (47%), Gaps = 51/289 (17%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEV 245
+ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEA 60
Query: 246 DTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H ++QL+G C EPP+ +++ E + T L L R+E +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPF--YIIIEFM--TYGNLLDYLRECNRQEVSAVV---- 112
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMAL 363
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 113 -LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----------IEKDY 408
G + APE + +S KSDV++FG++L EI T G PY +EKDY
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 230 R-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 138/289 (47%), Gaps = 51/289 (17%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEV 245
+ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-----FLKEA 60
Query: 246 DTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H ++QL+G C EPP+ +++ E + T L L R+E +
Sbjct: 61 AVMKEIKHPNLVQLLGVCTREPPF--YIIIEFM--TYGNLLDYLRECNRQEVSAVV---- 112
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMAL 363
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 113 -LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----------IEKDY 408
G + APE + +S KSDV++FG++L EI T G PY +EKDY
Sbjct: 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY 229
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ ME EG PE ++ EL+ W + S RPSF+ I
Sbjct: 230 R-----MERPEG-----CPE------KVYELMRACWQWNPSDRPSFAEI 262
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 136/280 (48%), Gaps = 23/280 (8%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+GW ++ KE+ L + IG+G ++ +RG VAVKCI N+ F E
Sbjct: 186 SGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI------KNDATAQAFLAEASV 239
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHGLGSQRRKERMVPLPPFEER 306
+++ RH ++QL+G +E ++VTE + +L ++L G +
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL-------- 291
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT 366
L +L++ +AM+YL + +HRDL N+ + + +++DFG + S +
Sbjct: 292 LKFSLDVCEAMEYL--EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP 349
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ APE ++ + +S KSDV+SFGI+L EI + G PY K +E G P
Sbjct: 350 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP- 408
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQ 465
DG + +++ W DA+ RP+F + L++I+
Sbjct: 409 ----DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 134/277 (48%), Gaps = 29/277 (10%)
Query: 187 MNGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQE 244
M+ W ++ +I ++ K+G G +Y +W+ L VAVK + D E F +E
Sbjct: 24 MDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE-----FLKE 78
Query: 245 VDTLSRQRHRFVLQLMGAC-LEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPF 303
+ +H ++QL+G C LEPP+ ++VTE + L L R+E +
Sbjct: 79 AAVMKEIKHPNLVQLLGVCTLEPPF--YIVTEYM--PYGNLLDYLRECNREEVTAVV--- 131
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMA 362
L A +I+ AM+YL +K IHRDL N + + V++ADFG +R ++ D A
Sbjct: 132 --LLYMATQISSAMEYL--EKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTA 187
Query: 363 LTGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVG 418
G + APE + +S KSDV++FG++L EI T G PY D +E G
Sbjct: 188 HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKG 247
Query: 419 EGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFS 455
+P +G ++ EL+ W + RPSF+
Sbjct: 248 YRMEQP-----EGCPPKVYELMRACWKWSPADRPSFA 279
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 135/278 (48%), Gaps = 23/278 (8%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLS 249
W ++ KE+ L + IG+G ++ +RG VAVKCI N+ F E ++
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI------KNDATAQAFLAEASVMT 54
Query: 250 RQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHGLGSQRRKERMVPLPPFEERLA 308
+ RH ++QL+G +E ++VTE + +L ++L G + L
Sbjct: 55 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL--------LK 106
Query: 309 RALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV 368
+L++ +AM+YL + +HRDL N+ + + +++DFG + S +
Sbjct: 107 FSLDVCEAMEYL--EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK 164
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALP 427
+ APE ++ + +S KSDV+SFGI+L EI + G PY K +E G P
Sbjct: 165 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAP--- 221
Query: 428 EEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQ 465
DG + E++ W DA++RPSF + L++I+
Sbjct: 222 --DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 257
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 142/293 (48%), Gaps = 38/293 (12%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLS 249
W I +++++ E IG+G +Y W G +VA++ I D NE+ + F +EV
Sbjct: 28 WDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLI--DIERDNEDQLKAFKREVMAYR 84
Query: 250 RQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLAR 309
+ RH V+ MGAC+ PP+ + + G TL S R ++V ++A+
Sbjct: 85 QTRHENVVLFMGACMSPPHLAIITSLCKGRTLY-------SVVRDAKIVLDVNKTRQIAQ 137
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG--------HARFLSDGEM 361
EI + M YLH + ++H+DLK N+F D+ K V I DFG A D
Sbjct: 138 --EIVKGMGYLHAK--GILHKDLKSKNVFYDNGK-VVITDFGLFSISGVLQAGRREDKLR 192
Query: 362 ALTGTFVYMAPEVIQ---------CEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAK 412
G ++APE+I+ P+S+ SDV++ G I E+ P+ +PA+
Sbjct: 193 IQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF---KTQPAE 249
Query: 413 -IAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
I ++G G ++P L + G +E+ +++ W + RP+F+ + L+ +
Sbjct: 250 AIIWQMGTG-MKPNL-SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 134/288 (46%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 65
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++VTE + +L ++L G +G R ++V +
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM---- 119
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
A +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 120 -----AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 172
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 226
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W D RP+F + L++
Sbjct: 227 QVERGYRMPCPPECPESLH---DLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 134/288 (46%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 65
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++VTE + +L ++L G +G R ++V +
Sbjct: 66 VMKKIRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM---- 119
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
A +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 120 -----AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 172
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 226
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W D RP+F + L++
Sbjct: 227 QVERGYRMPCPPECPESLH---DLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 134/288 (46%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 2 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 56
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++VTE + +L ++L G +G R ++V +
Sbjct: 57 VMKKLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM---- 110
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
A +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 111 -----AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 163
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 164 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 217
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W D RP+F + L++
Sbjct: 218 QVERGYRMPCPPECPESLH---DLMCQCWRKDPEERPTFEYLQAFLED 262
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 133/288 (46%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 65
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++VTE + L ++L G +G R ++V +
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI--YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDM---- 119
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
A +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 120 -----AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 172
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 226
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W D RP+F + L++
Sbjct: 227 QVERGYRMPCPPECPESLH---DLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 133/287 (46%), Gaps = 39/287 (13%)
Query: 189 GWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVDT 247
W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 1 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQV 55
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFEE 305
+ + RH ++QL E P ++VTE + +L ++L G +G R ++V +
Sbjct: 56 MKKLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM----- 108
Query: 306 RLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALT 364
A +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 109 ----AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 162
Query: 365 GT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE- 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 163 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLDQ 216
Query: 420 ---GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W D RP+F + L++
Sbjct: 217 VERGYRMPCPPECPESLH---DLMCQCWRKDPEERPTFEYLQAFLED 260
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 133/288 (46%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 65
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++VTE + +L ++L G +G R ++V +
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM---- 119
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
A +IA M Y+ ++ +HRDL +NI + + ++ADFG AR + D E A
Sbjct: 120 -----AAQIASGMAYV--ERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTAR 172
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 226
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W D RP+F + L++
Sbjct: 227 QVERGYRMPCPPECPESLH---DLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 134/288 (46%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P + F QE
Sbjct: 178 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-----GNMSPEAFLQEAQ 232
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++VTE + +L ++L G +G R ++V +
Sbjct: 233 VMKKLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM---- 286
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
A +IA M Y+ ++ +HRDL+ +NI + + ++ADFG R + D E A
Sbjct: 287 -----AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTAR 339
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 340 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 393
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W D RP+F + L++
Sbjct: 394 QVERGYRMPCPPECPESLH---DLMCQCWRKDPEERPTFEYLQAFLED 438
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 65
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++V E + +L ++L G +G R ++V +
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI--YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM---- 119
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
A +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 120 -----AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 172
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 226
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W D RP+F + L++
Sbjct: 227 QVERGYRMPCPPECPESLH---DLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 65
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++V E + +L ++L G +G R ++V +
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI--YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM---- 119
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
A +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 120 -----AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTAR 172
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 226
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W D RP+F + L++
Sbjct: 227 QVERGYRMPCPPECPESLH---DLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 65
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++V E + +L ++L G +G R ++V +
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI--YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDM---- 119
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
A +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 120 -----AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 172
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 226
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W D RP+F + L++
Sbjct: 227 QVERGYRMPCPPECPESLH---DLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 231
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++VTE + +L ++L G G R ++V +
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM---- 285
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
A +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 286 -----AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 392
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W + RP+F + L++
Sbjct: 393 QVERGYRMPCPPECPESLH---DLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 231
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++VTE + +L ++L G G R ++V +
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM---- 285
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
A +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 286 -----AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 392
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W + RP+F + L++
Sbjct: 393 QVERGYRMPCPPECPESLH---DLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 132/288 (45%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 11 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 65
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++V E + L ++L G +G R ++V +
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI--YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM---- 119
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
A +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 120 -----AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 172
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 173 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 226
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W D RP+F + L++
Sbjct: 227 QVERGYRMPCPPECPESLH---DLMCQCWRKDPEERPTFEYLQAFLED 271
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 314
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++VTE + +L ++L G G R ++V +
Sbjct: 315 VMKKLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM---- 368
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE-MAL 363
A +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 369 -----AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 421
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 475
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W + RP+F + L++
Sbjct: 476 QVERGYRMPCPPECPESLH---DLMCQCWRKEPEERPTFEYLQAFLED 520
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 133/288 (46%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 4 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 58
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++VTE + +L ++L G G R ++V +
Sbjct: 59 VMKKLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM---- 112
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
A +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 113 -----AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 165
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 166 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 219
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W + RP+F + L++
Sbjct: 220 QVERGYRMPCPPECPESLH---DLMCQCWRKEPEERPTFEYLQAFLED 264
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 130/285 (45%), Gaps = 35/285 (12%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTF--FAQEVD 246
W IDP E+ ++IG G ++ W D VA+K I E A++ F +E +
Sbjct: 3 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-------REGAMSEEDFIEEAE 55
Query: 247 TLSRQRHRFVLQLMGACLE-PPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + H ++QL G CLE P LVTE + HG L R +R L E
Sbjct: 56 VMMKLSHPKLVQLYGVCLEQAPIC--LVTEFME-------HGCLSDYLRTQR--GLFAAE 104
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF-LSDGEMAL 363
L L++ + M YL E VIHRDL N + + + ++++DFG RF L D +
Sbjct: 105 TLLGMCLDVCEGMAYLEE--ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
TGT + +PEV YS KSDV+SFG+++ E+ + G PY + + G
Sbjct: 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 222
Query: 420 GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P L + +++ W RP+FS + L I
Sbjct: 223 RLYKPRLAS-----THVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 132/288 (45%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 1 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 55
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P +VTE + +L ++L G G R ++V +
Sbjct: 56 VMKKLRHEKLVQLYAVVSEEPIX--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDM---- 109
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
A +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 110 -----AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTAR 162
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 163 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 216
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W + RP+F + L++
Sbjct: 217 QVERGYRMPCPPECPESLH---DLMCQCWRKEPEERPTFEYLQAFLED 261
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 133/288 (46%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 8 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 62
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++VTE + +L ++L G G R ++V +
Sbjct: 63 VMKKLRHEKLVQLYAVVSEEPI--YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDM---- 116
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
+ +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 117 -----SAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 169
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 170 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 223
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W + RP+F + L++
Sbjct: 224 QVERGYRMPCPPECPESLH---DLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 133/288 (46%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 8 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 62
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++VTE + +L ++L G G R ++V +
Sbjct: 63 VMKKLRHEKLVQLYAVVSEEPI--YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDM---- 116
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
+ +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 117 -----SAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTAR 169
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 170 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 223
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W + RP+F + L++
Sbjct: 224 QVERGYRMPCPPECPESLH---DLMCQCWRKEPEERPTFEYLQAFLED 268
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 132/288 (45%), Gaps = 39/288 (13%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L+ K+GQG ++ W G VA+K + P F QE
Sbjct: 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-----FLQEAQ 231
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGT-TLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + RH ++QL E P ++V E + +L ++L G G R ++V +
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEPI--YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDM---- 285
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
A +IA M Y+ ++ +HRDL+ +NI + + ++ADFG AR + D E A
Sbjct: 286 -----AAQIASGMAYV--ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE ++ KSDV+SFGI+L E+ T G PY P + EV +
Sbjct: 339 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY------PGMVNREVLD 392
Query: 420 ----GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
G P PE L +L+C W + RP+F + L++
Sbjct: 393 QVERGYRMPCPPECPESLH---DLMCQCWRKEPEERPTFEYLQAFLED 437
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 129/285 (45%), Gaps = 35/285 (12%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTF--FAQEVD 246
W IDP E+ ++IG G ++ W D VA+K I E A++ F +E +
Sbjct: 5 WVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-------REGAMSEEDFIEEAE 57
Query: 247 TLSRQRHRFVLQLMGACLE-PPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFE 304
+ + H ++QL G CLE P LV E + HG L R +R L E
Sbjct: 58 VMMKLSHPKLVQLYGVCLEQAPIC--LVFEFME-------HGCLSDYLRTQR--GLFAAE 106
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF-LSDGEMAL 363
L L++ + M YL E VIHRDL N + + + ++++DFG RF L D +
Sbjct: 107 TLLGMCLDVCEGMAYLEE--ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
TGT + +PEV YS KSDV+SFG+++ E+ + G PY + + G
Sbjct: 165 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 224
Query: 420 GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P L + +++ W RP+FS + L I
Sbjct: 225 RLYKPRLAS-----THVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 134/280 (47%), Gaps = 33/280 (11%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
I K++ L EK+G G+ + R W + + VAVKC+ PD E A+ F +EV+
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE-AMDDFIREVN 67
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ HR +++L G L PP + +VTEL LG+ L + RK + L
Sbjct: 68 AMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLL--------DRLRKHQGHFLLGTL 117
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMA 362
R A +++A+ M YL ++ IHRDL N+ L V+I DFG R L +D
Sbjct: 118 SRYA--VQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 173
Query: 363 LTG----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEV 417
+ F + APE ++ +S SD + FG+ L E+ T G P+I ++I ++
Sbjct: 174 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI--GLNGSQILHKI 231
Query: 418 GEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ R PE+ Q ++ ++ W RP+F ++
Sbjct: 232 DKEGERLPRPEDCPQ--DIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 138/293 (47%), Gaps = 45/293 (15%)
Query: 187 MNGWYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEV 245
M W IDPK++ +++G G + WRG DVA+K I +E F +E
Sbjct: 1 MGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-----FIEEA 55
Query: 246 DTLSRQRHRFVLQLMGACLE--PPYRGWLVTELLGT-----TLKEWLHGLGSQRRKERMV 298
+ H ++QL G C + P + ++TE + L+E H +Q
Sbjct: 56 KVMMNLSHEKLVQLYGVCTKQRPIF---IITEYMANGCLLNYLREMRHRFQTQ------- 105
Query: 299 PLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
+ L ++ +AM+YL + + +HRDL N ++D V+++DFG +R++ D
Sbjct: 106 ------QLLEMCKDVCEAMEYL--ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 157
Query: 359 GEM--ALTGTF--VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKI 413
E ++ F + PEV+ +S KSD+++FG+++ EI + G PY + + ++
Sbjct: 158 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY--ERFTNSET 215
Query: 414 AMEVGEG--KLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
A + +G RP L E ++ ++ W A RP+F + ++ ++
Sbjct: 216 AEHIAQGLRLYRPHLASE-----KVYTIMYSCWHEKADERPTFKILLSNILDV 263
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 134/280 (47%), Gaps = 33/280 (11%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
I K++ L EK+G G+ + R W + + VAVKC+ PD E A+ F +EV+
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE-AMDDFIREVN 67
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ HR +++L G L PP + +VTEL LG+ L + RK + L
Sbjct: 68 AMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLL--------DRLRKHQGHFLLGTL 117
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMA 362
R A +++A+ M YL ++ IHRDL N+ L V+I DFG R L +D
Sbjct: 118 SRYA--VQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 173
Query: 363 LTG----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEV 417
+ F + APE ++ +S SD + FG+ L E+ T G P+I ++I ++
Sbjct: 174 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI--GLNGSQILHKI 231
Query: 418 GEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ R PE+ Q ++ ++ W RP+F ++
Sbjct: 232 DKEGERLPRPEDCPQ--DIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 134/280 (47%), Gaps = 33/280 (11%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
I K++ L EK+G G+ + R W + + VAVKC+ PD E A+ F +EV+
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE-AMDDFIREVN 73
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ HR +++L G L PP + +VTEL LG+ L + RK + L
Sbjct: 74 AMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLL--------DRLRKHQGHFLLGTL 123
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMA 362
R A +++A+ M YL ++ IHRDL N+ L V+I DFG R L +D
Sbjct: 124 SRYA--VQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 179
Query: 363 LTG----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEV 417
+ F + APE ++ +S SD + FG+ L E+ T G P+I ++I ++
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI--GLNGSQILHKI 237
Query: 418 GEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ R PE+ Q ++ ++ W RP+F ++
Sbjct: 238 DKEGERLPRPEDCPQ--DIYNVMVQCWAHKPEDRPTFVAL 275
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 134/280 (47%), Gaps = 33/280 (11%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
I K++ L EK+G G+ + R W + + VAVKC+ PD E A+ F +EV+
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE-AMDDFIREVN 73
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ HR +++L G L PP + +VTEL LG+ L + RK + L
Sbjct: 74 AMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLL--------DRLRKHQGHFLLGTL 123
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMA 362
R A +++A+ M YL ++ IHRDL N+ L V+I DFG R L +D
Sbjct: 124 SRYA--VQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 179
Query: 363 LTG----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEV 417
+ F + APE ++ +S SD + FG+ L E+ T G P+I ++I ++
Sbjct: 180 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI--GLNGSQILHKI 237
Query: 418 GEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ R PE+ Q ++ ++ W RP+F ++
Sbjct: 238 DKEGERLPRPEDCPQ--DIYNVMVQCWAHKPEDRPTFVAL 275
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 134/280 (47%), Gaps = 33/280 (11%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
I K++ L EK+G G+ + R W + + VAVKC+ PD E A+ F +EV+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE-AMDDFIREVN 63
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ HR +++L G L PP + +VTEL LG+ L + RK + L
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLL--------DRLRKHQGHFLLGTL 113
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMA 362
R A +++A+ M YL ++ IHRDL N+ L V+I DFG R L +D
Sbjct: 114 SRYA--VQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXV 169
Query: 363 LTG----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEV 417
+ F + APE ++ +S SD + FG+ L E+ T G P+I ++I ++
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI--GLNGSQILHKI 227
Query: 418 GEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ R PE+ Q ++ ++ W RP+F ++
Sbjct: 228 DKEGERLPRPEDCPQ--DIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 134/280 (47%), Gaps = 33/280 (11%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
I K++ L EK+G G+ + R W + + VAVKC+ PD E A+ F +EV+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE-AMDDFIREVN 63
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ HR +++L G L PP + +VTEL LG+ L + RK + L
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLL--------DRLRKHQGHFLLGTL 113
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMA 362
R A +++A+ M YL ++ IHRDL N+ L V+I DFG R L +D
Sbjct: 114 SRYA--VQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169
Query: 363 LTG----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEV 417
+ F + APE ++ +S SD + FG+ L E+ T G P+I ++I ++
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI--GLNGSQILHKI 227
Query: 418 GEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ R PE+ Q ++ ++ W RP+F ++
Sbjct: 228 DKEGERLPRPEDCPQ--DIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 134/280 (47%), Gaps = 33/280 (11%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
I K++ L EK+G G+ + R W + + VAVKC+ PD E A+ F +EV+
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPE-AMDDFIREVN 63
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ HR +++L G L PP + +VTEL LG+ L + RK + L
Sbjct: 64 AMHSLDHRNLIRLYGVVLTPPMK--MVTELAPLGSLL--------DRLRKHQGHFLLGTL 113
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMA 362
R A +++A+ M YL ++ IHRDL N+ L V+I DFG R L +D
Sbjct: 114 SRYA--VQVAEGMGYLESKR--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV 169
Query: 363 LTG----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEV 417
+ F + APE ++ +S SD + FG+ L E+ T G P+I ++I ++
Sbjct: 170 MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI--GLNGSQILHKI 227
Query: 418 GEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
+ R PE+ Q ++ ++ W RP+F ++
Sbjct: 228 DKEGERLPRPEDCPQ--DIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 135/285 (47%), Gaps = 37/285 (12%)
Query: 180 VTVSQAKMNGWYIDPKEIDLQ-EKIGQGTTANIYRAIWRGLD------VAVKCIYPDFFH 232
V V M DP+E+ + E+IG+G+ +++ G+D VA+K I
Sbjct: 7 VAVQVPGMQNNIADPEELFTKLERIGKGSFGEVFK----GIDNRTQQVVAIKIID---LE 59
Query: 233 TNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQR 292
E+ + QE+ LS+ +V + G+ L+ + W++ E LG GS
Sbjct: 60 EAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGS-KLWIIMEYLGG---------GSAL 109
Query: 293 RKERMVPLPPFEERLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG 351
R P F+ +A L EI + + YLH +K IHRD+K +N+ L + V++ADFG
Sbjct: 110 DLLRAGPFDEFQ--IATMLKEILKGLDYLHSEKK--IHRDIKAANVLLSEQGDVKLADFG 165
Query: 352 HARFLSDGEM---ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
A L+D ++ GT +MAPEVIQ Y K+D++S GI E+ G P D
Sbjct: 166 VAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP--NSDM 223
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPS 453
P ++ + + + + +E I+ CL + D S RP+
Sbjct: 224 HPMRVLFLIPKNNPPTLVGDFTKSFKEFID-ACL--NKDPSFRPT 265
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 137/290 (47%), Gaps = 45/290 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W IDPK++ +++G G + WRG DVA+K I +E F +E +
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-----FIEEAKVM 73
Query: 249 SRQRHRFVLQLMGACLE--PPYRGWLVTELLGT-----TLKEWLHGLGSQRRKERMVPLP 301
H ++QL G C + P + ++TE + L+E H +Q
Sbjct: 74 MNLSHEKLVQLYGVCTKQRPIF---IITEYMANGCLLNYLREMRHRFQTQ---------- 120
Query: 302 PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF-LSDGE 360
+ L ++ +AM+YL + + +HRDL N ++D V+++DFG +R+ L D E
Sbjct: 121 ---QLLEMCKDVCEAMEYL--ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEE 175
Query: 361 MALTGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAME 416
+ G+ + PEV+ +S KSD+++FG+++ EI + G PY + + ++ A
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY--ERFTNSETAEH 233
Query: 417 VGEG--KLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ +G RP L E ++ ++ W A RP+F + ++ ++
Sbjct: 234 IAQGLRLYRPHLASE-----KVYTIMYSCWHEKADERPTFKILLSNILDV 278
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 19/209 (9%)
Query: 203 IGQGTTANIYRA-IWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMG 261
+G+G +Y+ + G VAVK + + E F EV+ +S HR +L+L G
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ---FQTEVEMISMAVHRNLLRLRG 102
Query: 262 ACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE--ERLARALEIAQAMQY 319
C+ P R + + ++ L +ER PP + +R AL A+ + Y
Sbjct: 103 FCMTPTERLLVYPYMANGSVASCL--------RERPESQPPLDWPKRQRIALGSARGLAY 154
Query: 320 LHEQ-KPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM----ALTGTFVYMAPEV 374
LH+ PK+IHRD+K +NI LD+ + DFG A+ + + A+ GT ++APE
Sbjct: 155 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEY 214
Query: 375 IQCEPYSEKSDVYSFGIILNEIITGNHPY 403
+ SEK+DV+ +G++L E+ITG +
Sbjct: 215 LSTGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 9/122 (7%)
Query: 288 LGSQRRKERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHV 345
L S RK + P P +A+ A E+ A++YLH + +I+RDLKP NI LD H+
Sbjct: 93 LFSLLRKSQRFPNP-----VAKFYAAEVCLALEYLHSKD--IIYRDLKPENILLDKNGHI 145
Query: 346 RIADFGHARFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIE 405
+I DFG A+++ D L GT Y+APEV+ +PY++ D +SFGI++ E++ G P+ +
Sbjct: 146 KITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 205
Query: 406 KD 407
+
Sbjct: 206 SN 207
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 129/286 (45%), Gaps = 35/286 (12%)
Query: 189 GWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVT--FFAQEV 245
G IDP E+ ++IG G ++ W D VA+K I E A++ F +E
Sbjct: 1 GSVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-------REGAMSEEDFIEEA 53
Query: 246 DTLSRQRHRFVLQLMGACLE-PPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPF 303
+ + + H ++QL G CLE P LV E + HG L R +R L
Sbjct: 54 EVMMKLSHPKLVQLYGVCLEQAPIC--LVFEFME-------HGCLSDYLRTQR--GLFAA 102
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF-LSDGEMA 362
E L L++ + M YL E VIHRDL N + + + ++++DFG RF L D +
Sbjct: 103 ETLLGMCLDVCEGMAYLEE--ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 160
Query: 363 LTGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVG 418
TGT + +PEV YS KSDV+SFG+++ E+ + G PY + + G
Sbjct: 161 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 220
Query: 419 EGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P L + +++ W RP+FS + L I
Sbjct: 221 FRLYKPRLAS-----THVYQIMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 137/290 (47%), Gaps = 45/290 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W IDPK++ +++G G + WRG DVA+K I +E F +E +
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-----FIEEAKVM 57
Query: 249 SRQRHRFVLQLMGACLE--PPYRGWLVTELLGT-----TLKEWLHGLGSQRRKERMVPLP 301
H ++QL G C + P + ++TE + L+E H +Q
Sbjct: 58 MNLSHEKLVQLYGVCTKQRPIF---IITEYMANGCLLNYLREMRHRFQTQ---------- 104
Query: 302 PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM 361
+ L ++ +AM+YL + + +HRDL N ++D V+++DFG +R++ D E
Sbjct: 105 ---QLLEMCKDVCEAMEYL--ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 159
Query: 362 --ALTGTF--VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAME 416
++ F + PEV+ +S KSD+++FG+++ EI + G PY + + ++ A
Sbjct: 160 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY--ERFTNSETAEH 217
Query: 417 VGEG--KLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ +G RP L E ++ ++ W A RP+F + ++ ++
Sbjct: 218 IAQGLRLYRPHLASE-----KVYTIMYSCWHEKADERPTFKILLSNILDV 262
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 137/290 (47%), Gaps = 45/290 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W IDPK++ +++G G + WRG DVA+K I +E F +E +
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-----FIEEAKVM 73
Query: 249 SRQRHRFVLQLMGACLE--PPYRGWLVTELLGT-----TLKEWLHGLGSQRRKERMVPLP 301
H ++QL G C + P + ++TE + L+E H +Q
Sbjct: 74 MNLSHEKLVQLYGVCTKQRPIF---IITEYMANGCLLNYLREMRHRFQTQ---------- 120
Query: 302 PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM 361
+ L ++ +AM+YL + + +HRDL N ++D V+++DFG +R++ D E
Sbjct: 121 ---QLLEMCKDVCEAMEYL--ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175
Query: 362 --ALTGTF--VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAME 416
++ F + PEV+ +S KSD+++FG+++ EI + G PY + + ++ A
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY--ERFTNSETAEH 233
Query: 417 VGEG--KLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ +G RP L E ++ ++ W A RP+F + ++ ++
Sbjct: 234 IAQGLRLYRPHLASE-----KVYTIMYSCWHEKADERPTFKILLSNILDV 278
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 137/290 (47%), Gaps = 45/290 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W IDPK++ +++G G + WRG DVA+K I +E F +E +
Sbjct: 10 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-----FIEEAKVM 64
Query: 249 SRQRHRFVLQLMGACLE--PPYRGWLVTELLGT-----TLKEWLHGLGSQRRKERMVPLP 301
H ++QL G C + P + ++TE + L+E H +Q
Sbjct: 65 MNLSHEKLVQLYGVCTKQRPIF---IITEYMANGCLLNYLREMRHRFQTQ---------- 111
Query: 302 PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM 361
+ L ++ +AM+YL + + +HRDL N ++D V+++DFG +R++ D E
Sbjct: 112 ---QLLEMCKDVCEAMEYL--ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 166
Query: 362 --ALTGTF--VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAME 416
++ F + PEV+ +S KSD+++FG+++ EI + G PY + + ++ A
Sbjct: 167 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY--ERFTNSETAEH 224
Query: 417 VGEG--KLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ +G RP L E ++ ++ W A RP+F + ++ ++
Sbjct: 225 IAQGLRLYRPHLASE-----KVYTIMYSCWHEKADERPTFKILLSNILDV 269
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 129/286 (45%), Gaps = 35/286 (12%)
Query: 189 GWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVT--FFAQEV 245
G IDP E+ ++IG G ++ W D VA+K I E A++ F +E
Sbjct: 1 GSVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-------REGAMSEEDFIEEA 53
Query: 246 DTLSRQRHRFVLQLMGACLE-PPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPF 303
+ + + H ++QL G CLE P LV E + HG L R +R L
Sbjct: 54 EVMMKLSHPKLVQLYGVCLEQAPIC--LVFEFME-------HGCLSDYLRTQR--GLFAA 102
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF-LSDGEMA 362
E L L++ + M YL E VIHRDL N + + + ++++DFG RF L D +
Sbjct: 103 ETLLGMCLDVCEGMAYLEE--ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 160
Query: 363 LTGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVG 418
TGT + +PEV YS KSDV+SFG+++ E+ + G PY + + G
Sbjct: 161 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 220
Query: 419 EGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P L + +++ W RP+FS + L I
Sbjct: 221 FRLYKPRLAS-----THVYQIMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 137/290 (47%), Gaps = 45/290 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W IDPK++ +++G G + WRG DVA+K I +E F +E +
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-----FIEEAKVM 58
Query: 249 SRQRHRFVLQLMGACLE--PPYRGWLVTELLGT-----TLKEWLHGLGSQRRKERMVPLP 301
H ++QL G C + P + ++TE + L+E H +Q
Sbjct: 59 MNLSHEKLVQLYGVCTKQRPIF---IITEYMANGCLLNYLREMRHRFQTQ---------- 105
Query: 302 PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM 361
+ L ++ +AM+YL + + +HRDL N ++D V+++DFG +R++ D E
Sbjct: 106 ---QLLEMCKDVCEAMEYL--ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 160
Query: 362 ALT-GT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAME 416
+ G+ + PEV+ +S KSD+++FG+++ EI + G PY + + ++ A
Sbjct: 161 TSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY--ERFTNSETAEH 218
Query: 417 VGEG--KLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ +G RP L E ++ ++ W A RP+F + ++ ++
Sbjct: 219 IAQGLRLYRPHLASE-----KVYTIMYSCWHEKADERPTFKILLSNILDV 263
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 126/281 (44%), Gaps = 31/281 (11%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTFFAQEVDTLSR 250
IDP E+ ++IG G ++ W D VA+K I ++ F +E + + +
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDD-----FIEEAEVMMK 78
Query: 251 QRHRFVLQLMGACLE-PPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLA 308
H ++QL G CLE P LV E + HG L R +R L E L
Sbjct: 79 LSHPKLVQLYGVCLEQAPIC--LVFEFME-------HGCLSDYLRTQR--GLFAAETLLG 127
Query: 309 RALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF-LSDGEMALTGT- 366
L++ + M YL E VIHRDL N + + + ++++DFG RF L D + TGT
Sbjct: 128 MCLDVCEGMAYLEE--ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK 185
Query: 367 --FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLR 423
+ +PEV YS KSDV+SFG+++ E+ + G PY + + G +
Sbjct: 186 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 245
Query: 424 PALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P L + +++ W RP+FS + L I
Sbjct: 246 PRLAS-----THVYQIMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 19/209 (9%)
Query: 203 IGQGTTANIYRA-IWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMG 261
+G+G +Y+ + G VAVK + + E F EV+ +S HR +L+L G
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ---FQTEVEMISMAVHRNLLRLRG 94
Query: 262 ACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE--ERLARALEIAQAMQY 319
C+ P R + + ++ L +ER PP + +R AL A+ + Y
Sbjct: 95 FCMTPTERLLVYPYMANGSVASCL--------RERPESQPPLDWPKRQRIALGSARGLAY 146
Query: 320 LHEQ-KPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM----ALTGTFVYMAPEV 374
LH+ PK+IHRD+K +NI LD+ + DFG A+ + + A+ G ++APE
Sbjct: 147 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEY 206
Query: 375 IQCEPYSEKSDVYSFGIILNEIITGNHPY 403
+ SEK+DV+ +G++L E+ITG +
Sbjct: 207 LSTGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 128/283 (45%), Gaps = 35/283 (12%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWRGLD-VAVKCIYPDFFHTNENAVTF--FAQEVDTL 248
IDP E+ ++IG G ++ W D VA+K I E A++ F +E + +
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-------REGAMSEEDFIEEAEVM 54
Query: 249 SRQRHRFVLQLMGACLE-PPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEER 306
+ H ++QL G CLE P LV E + HG L R +R L E
Sbjct: 55 MKLSHPKLVQLYGVCLEQAPIC--LVFEFME-------HGCLSDYLRTQR--GLFAAETL 103
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF-LSDGEMALTG 365
L L++ + M YL E VIHRDL N + + + ++++DFG RF L D + TG
Sbjct: 104 LGMCLDVCEGMAYLEE--ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 161
Query: 366 T---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGK 421
T + +PEV YS KSDV+SFG+++ E+ + G PY + + G
Sbjct: 162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL 221
Query: 422 LRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P L + +++ W RP+FS + L I
Sbjct: 222 YKPRLAS-----THVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 133/286 (46%), Gaps = 33/286 (11%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIW-RGLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L++K+G G ++ A + + VAVK + P +V F E +
Sbjct: 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKP-----GSMSVEAFLAEAN 235
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELL--GTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H +++L + P +++TE + G+ L GS++ PLP
Sbjct: 236 VMKTLQHDKLVKLHAVVTKEPI--YIITEFMAKGSLLDFLKSDEGSKQ------PLPKL- 286
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
+ + +IA+ M ++ ++ IHRDL+ +NI + + +IADFG AR + D E A
Sbjct: 287 --IDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE I ++ KSDV+SFGI+L EI+T G PY A+E G
Sbjct: 343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY 402
Query: 420 GKLRPA-LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
RP PE EL ++ W RP+F I L +
Sbjct: 403 RMPRPENCPE------ELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 134/287 (46%), Gaps = 33/287 (11%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIW-RGLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L++K+G G ++ A + + VAVK + P +V F E +
Sbjct: 8 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKP-----GSMSVEAFLAEAN 62
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELL--GTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H +++L + P +++TE + G+ L GS++ PLP
Sbjct: 63 VMKTLQHDKLVKLHAVVTKEPI--YIITEFMAKGSLLDFLKSDEGSKQ------PLPKL- 113
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
+ + +IA+ M ++ ++ IHRDL+ +NI + + +IADFG AR + D E A
Sbjct: 114 --IDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 169
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE I ++ KSDV+SFGI+L EI+T G PY A+E G
Sbjct: 170 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY 229
Query: 420 GKLRPA-LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQ 465
RP PE EL ++ W RP+F I L + +
Sbjct: 230 RMPRPENCPE------ELYNIMMRCWKNRPEERPTFEYIQSVLDDFE 270
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 29/284 (10%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W + + + L E++G G ++ + G VAVK + + F E +
Sbjct: 6 DAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEAN 60
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEE 305
+ + +H+ +++L + P +++TE + +L ++L + +
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLT--------INK 110
Query: 306 RLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALT 364
L A +IA+ M ++ E+ IHRDL+ +NI + D +IADFG AR + D E A
Sbjct: 111 LLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTARE 168
Query: 365 GT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEG 420
G + APE I ++ KSDV+SFGI+L EI+T G PY +E G
Sbjct: 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR 228
Query: 421 KLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+RP D EL +L+ L W RP+F + L++
Sbjct: 229 MVRP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 128/289 (44%), Gaps = 44/289 (15%)
Query: 195 KEIDLQ--EKIGQGTTANIYRAIWR------GLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
KE +L+ + +G G +Y+ IW + VA+K + T A F E
Sbjct: 36 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET---TGPKANVEFMDEAL 92
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLG-TTLKEWLH----GLGSQRRKERMVPLP 301
++ H +++L+G CL P + LVT+L+ L E++H +GSQ
Sbjct: 93 IMASMDHPHLVRLLGVCLSPTIQ--LVTQLMPHGCLLEYVHEHKDNIGSQLL-------- 142
Query: 302 PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM 361
L ++IA+ M YL E++ ++HRDL N+ + HV+I DFG AR L E
Sbjct: 143 -----LNWCVQIAKGMMYLEERR--LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 195
Query: 362 ALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAM 415
+MA E I ++ +SDV+S+G+ + E++T G PY + +
Sbjct: 196 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL 255
Query: 416 EVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
E GE +P + D + ++ W DA RP F + +
Sbjct: 256 EKGERLPQPPICTIDVYM-----VMVKCWMIDADSRPKFKELAAEFSRM 299
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 37/273 (13%)
Query: 192 IDPKEIDLQ-EKIGQGTTANIYRAIWRGLD------VAVKCIYPDFFHTNENAVTFFAQE 244
+DP+E+ + EKIG+G+ +++ G+D VA+K I E+ + QE
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFK----GIDNRTQKVVAIKIID---LEEAEDEIEDIQQE 55
Query: 245 VDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ LS+ +V + G+ L+ + W++ E LG GS + + P P E
Sbjct: 56 ITVLSQCDSPYVTKYYGSYLKDT-KLWIIMEYLGG---------GSAL--DLLEPGPLDE 103
Query: 305 ERLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-- 361
++A L EI + + YLH +K IHRD+K +N+ L + V++ADFG A L+D ++
Sbjct: 104 TQIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 161
Query: 362 -ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
GT +MAPEVI+ Y K+D++S GI E+ G P+ E P K+ + +
Sbjct: 162 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE--LHPMKVLFLIPKN 219
Query: 421 KLRPALPEEDGQLRELIELICLSWDGDASVRPS 453
L+E +E CL + + S RP+
Sbjct: 220 NPPTLEGNYSKPLKEFVE-ACL--NKEPSFRPT 249
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 117/240 (48%), Gaps = 26/240 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIW--RGLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
W I+ + +LQE IG G TA + A + VA+K I + T+ + + +E+
Sbjct: 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELL---KEIQA 66
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELL--GTTLKEWLHGLGSQRRKERMVPLPPFEE 305
+S+ H ++ + + WLV +LL G+ L H + K ++ E
Sbjct: 67 MSQCHHPNIVSYYTSFVVKD-ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD----ES 121
Query: 306 RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG----- 359
+A L E+ + ++YLH K IHRD+K NI L + V+IADFG + FL+ G
Sbjct: 122 TIATILREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 179
Query: 360 ---EMALTGTFVYMAPEVI-QCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAM 415
GT +MAPEV+ Q Y K+D++SFGI E+ TG PY Y P K+ M
Sbjct: 180 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY--HKYPPMKVLM 237
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 136/288 (47%), Gaps = 45/288 (15%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTLSR 250
IDPK++ +++G G + WRG DVA+K I +E F +E +
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-----FIEEAKVMMN 55
Query: 251 QRHRFVLQLMGACLE--PPYRGWLVTELLGT-----TLKEWLHGLGSQRRKERMVPLPPF 303
H ++QL G C + P + ++TE + L+E H +Q
Sbjct: 56 LSHEKLVQLYGVCTKQRPIF---IITEYMANGCLLNYLREMRHRFQTQ------------ 100
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-- 361
+ L ++ +AM+YL + + +HRDL N ++D V+++DFG +R++ D E
Sbjct: 101 -QLLEMCKDVCEAMEYL--ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS 157
Query: 362 ALTGTF--VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVG 418
++ F + PEV+ +S KSD+++FG+++ EI + G PY + + ++ A +
Sbjct: 158 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY--ERFTNSETAEHIA 215
Query: 419 EG--KLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+G RP L E ++ ++ W A RP+F + ++ ++
Sbjct: 216 QGLRLYRPHLASE-----KVYTIMYSCWHEKADERPTFKILLSNILDV 258
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 37/273 (13%)
Query: 192 IDPKEIDLQ-EKIGQGTTANIYRAIWRGLD------VAVKCIYPDFFHTNENAVTFFAQE 244
+DP+E+ + EKIG+G+ + +++G+D VA+K I E+ + QE
Sbjct: 23 MDPEELFTKLEKIGKGS----FGEVFKGIDNRTQKVVAIKIID---LEEAEDEIEDIQQE 75
Query: 245 VDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ LS+ +V + G+ L+ + W++ E LG GS + + P P E
Sbjct: 76 ITVLSQCDSPYVTKYYGSYLKDT-KLWIIMEYLGG---------GSAL--DLLEPGPLDE 123
Query: 305 ERLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-- 361
++A L EI + + YLH +K IHRD+K +N+ L + V++ADFG A L+D ++
Sbjct: 124 TQIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 181
Query: 362 -ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
GT +MAPEVI+ Y K+D++S GI E+ G P+ E P K+ + +
Sbjct: 182 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE--LHPMKVLFLIPKN 239
Query: 421 KLRPALPEEDGQLRELIELICLSWDGDASVRPS 453
L+E +E CL + + S RP+
Sbjct: 240 NPPTLEGNYSKPLKEFVE-ACL--NKEPSFRPT 269
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 37/273 (13%)
Query: 192 IDPKEIDLQ-EKIGQGTTANIYRAIWRGLD------VAVKCIYPDFFHTNENAVTFFAQE 244
+DP+E+ + EKIG+G+ +++ G+D VA+K I E+ + QE
Sbjct: 3 LDPEELFTKLEKIGKGSFGEVFK----GIDNRTQKVVAIKIID---LEEAEDEIEDIQQE 55
Query: 245 VDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ LS+ +V + G+ L+ + W++ E LG GS + + P P E
Sbjct: 56 ITVLSQCDSPYVTKYYGSYLKDT-KLWIIMEYLGG---------GSAL--DLLEPGPLDE 103
Query: 305 ERLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-- 361
++A L EI + + YLH +K IHRD+K +N+ L + V++ADFG A L+D ++
Sbjct: 104 TQIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR 161
Query: 362 -ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
GT +MAPEVI+ Y K+D++S GI E+ G P+ E P K+ + +
Sbjct: 162 NXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE--LHPMKVLFLIPKN 219
Query: 421 KLRPALPEEDGQLRELIELICLSWDGDASVRPS 453
L+E +E CL + + S RP+
Sbjct: 220 NPPTLEGNYSKPLKEFVE-ACL--NKEPSFRPT 249
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 117/240 (48%), Gaps = 26/240 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIW--RGLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
W I+ + +LQE IG G TA + A + VA+K I + T+ + + +E+
Sbjct: 5 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELL---KEIQA 61
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELL--GTTLKEWLHGLGSQRRKERMVPLPPFEE 305
+S+ H ++ + + WLV +LL G+ L H + K ++ E
Sbjct: 62 MSQCHHPNIVSYYTSFVVKD-ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD----ES 116
Query: 306 RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG----- 359
+A L E+ + ++YLH K IHRD+K NI L + V+IADFG + FL+ G
Sbjct: 117 TIATILREVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 174
Query: 360 ---EMALTGTFVYMAPEVI-QCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAM 415
GT +MAPEV+ Q Y K+D++SFGI E+ TG PY Y P K+ M
Sbjct: 175 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY--HKYPPMKVLM 232
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 122/279 (43%), Gaps = 42/279 (15%)
Query: 203 IGQGTTANIYRAIWR------GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFV 256
+G G +Y+ IW + VA+K + T A F E ++ H +
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNET---TGPKANVEFMDEALIMASMDHPHL 79
Query: 257 LQLMGACLEPPYRGWLVTELLG-TTLKEWLH----GLGSQRRKERMVPLPPFEERLARAL 311
++L+G CL P + LVT+L+ L E++H +GSQ L +
Sbjct: 80 VRLLGVCLSPTIQ--LVTQLMPHGCLLEYVHEHKDNIGSQLL-------------LNWCV 124
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT----- 366
+IA+ M YL E++ ++HRDL N+ + HV+I DFG AR L E
Sbjct: 125 QIAKGMMYLEERR--LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMP 182
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+MA E I ++ +SDV+S+G+ + E++T G PY + +E GE +P
Sbjct: 183 IKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPP 242
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ D + ++ W DA RP F + +
Sbjct: 243 ICTIDVYM-----VMVKCWMIDADSRPKFKELAAEFSRM 276
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 133/274 (48%), Gaps = 29/274 (10%)
Query: 187 MNGWYIDPKEIDLQ-EKIGQGTTANIYRAIWRGLD--VAVKCIYPDFFHTNENAVTFFAQ 243
M DP+E+ + EKIG+G+ +++ I VA+K I E+ + Q
Sbjct: 13 MQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID---LEEAEDEIEDIQQ 69
Query: 244 EVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPF 303
E+ LS+ +V + G+ L+ + W++ E LG GS + + P P
Sbjct: 70 EITVLSQCDSPYVTKYYGSYLKDT-KLWIIMEYLGG---------GSAL--DLLEPGPLD 117
Query: 304 EERLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM- 361
E ++A L EI + + YLH +K IHRD+K +N+ L + V++ADFG A L+D ++
Sbjct: 118 ETQIATILREILKGLDYLHSEKK--IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175
Query: 362 --ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGE 419
GT +MAPEVI+ Y K+D++S GI E+ G P+ E P K+ + +
Sbjct: 176 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE--LHPMKVLFLIPK 233
Query: 420 GKLRPALPEEDGQLRELIELICLSWDGDASVRPS 453
L+E +E CL + + S RP+
Sbjct: 234 NNPPTLEGNYSKPLKEFVE-ACL--NKEPSFRPT 264
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W + + + L E++G G ++ + G VAVK + + F E + +
Sbjct: 16 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEANLM 70
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
+ +H+ +++L + P +++TE + +L ++L + + L
Sbjct: 71 KQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLT--------INKLL 120
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALTGT 366
A +IA+ M ++ E+ IHRDL+ +NI + D +IADFG AR + D E A G
Sbjct: 121 DMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 178
Query: 367 ---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ APE I ++ KSDV+SFGI+L EI+T G PY +E G +
Sbjct: 179 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 238
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
RP D EL +L+ L W RP+F + L++
Sbjct: 239 RP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 275
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W + + + L E++G G ++ + G VAVK + + F E + +
Sbjct: 18 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEANLM 72
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
+ +H+ +++L + P +++TE + +L ++L + + L
Sbjct: 73 KQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLT--------INKLL 122
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALTGT 366
A +IA+ M ++ E+ IHRDL+ +NI + D +IADFG AR + D E A G
Sbjct: 123 DMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 180
Query: 367 ---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ APE I ++ KSDV+SFGI+L EI+T G PY +E G +
Sbjct: 181 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 240
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
RP D EL +L+ L W RP+F + L++
Sbjct: 241 RP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 277
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 30/280 (10%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-----LDVAVKCIYPDFFHTNENAVTFFAQEVDTLS 249
+++ L +G+G +Y ++ ++VAVK D N+ F E +
Sbjct: 24 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK---FMSEAVIMK 80
Query: 250 RQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLAR 309
H +++L+G E P W++ EL E H L + +++ L +
Sbjct: 81 NLDHPHIVKLIGIIEEEP--TWIIMELY--PYGELGHYLERNKNSLKVLTL------VLY 130
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT--- 366
+L+I +AM YL + +HRD+ NI + + V++ DFG +R++ D +
Sbjct: 131 SLQICKAMAYL--ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL 188
Query: 367 -FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRP 424
+M+PE I ++ SDV+ F + + EI++ G P+ + K +E G+
Sbjct: 189 PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD----- 243
Query: 425 ALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
LP+ D L L+ WD D S RP F+ + CSL ++
Sbjct: 244 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 283
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W + + + L E++G G ++ + G VAVK + + F E + +
Sbjct: 14 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEANLM 68
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
+ +H+ +++L + P +++TE + +L ++L + + L
Sbjct: 69 KQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLT--------INKLL 118
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALTGT 366
A +IA+ M ++ E+ IHRDL+ +NI + D +IADFG AR + D E A G
Sbjct: 119 DMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 176
Query: 367 ---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ APE I ++ KSDV+SFGI+L EI+T G PY +E G +
Sbjct: 177 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 236
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
RP D EL +L+ L W RP+F + L++
Sbjct: 237 RP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 273
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W + + + L E++G G ++ + G VAVK + + F E + +
Sbjct: 17 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEANLM 71
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
+ +H+ +++L + P +++TE + +L ++L + + L
Sbjct: 72 KQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLT--------INKLL 121
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALTGT 366
A +IA+ M ++ E+ IHRDL+ +NI + D +IADFG AR + D E A G
Sbjct: 122 DMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 179
Query: 367 ---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ APE I ++ KSDV+SFGI+L EI+T G PY +E G +
Sbjct: 180 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 239
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
RP D EL +L+ L W RP+F + L++
Sbjct: 240 RP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 276
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 30/280 (10%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-----LDVAVKCIYPDFFHTNENAVTFFAQEVDTLS 249
+++ L +G+G +Y ++ ++VAVK D N+ F E +
Sbjct: 8 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK---FMSEAVIMK 64
Query: 250 RQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLAR 309
H +++L+G E P W++ EL E H L + +++ L +
Sbjct: 65 NLDHPHIVKLIGIIEEEP--TWIIMELY--PYGELGHYLERNKNSLKVLTL------VLY 114
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT--- 366
+L+I +AM YL + +HRD+ NI + + V++ DFG +R++ D +
Sbjct: 115 SLQICKAMAYL--ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL 172
Query: 367 -FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRP 424
+M+PE I ++ SDV+ F + + EI++ G P+ + K +E G+
Sbjct: 173 PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD----- 227
Query: 425 ALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
LP+ D L L+ WD D S RP F+ + CSL ++
Sbjct: 228 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 267
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 30/280 (10%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-----LDVAVKCIYPDFFHTNENAVTFFAQEVDTLS 249
+++ L +G+G +Y ++ ++VAVK D N+ F E +
Sbjct: 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK---FMSEAVIMK 68
Query: 250 RQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLAR 309
H +++L+G E P W++ EL E H L + +++ L +
Sbjct: 69 NLDHPHIVKLIGIIEEEP--TWIIMELY--PYGELGHYLERNKNSLKVLTL------VLY 118
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT--- 366
+L+I +AM YL + +HRD+ NI + + V++ DFG +R++ D +
Sbjct: 119 SLQICKAMAYL--ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL 176
Query: 367 -FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRP 424
+M+PE I ++ SDV+ F + + EI++ G P+ + K +E G+
Sbjct: 177 PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGD----- 231
Query: 425 ALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
LP+ D L L+ WD D S RP F+ + CSL ++
Sbjct: 232 RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 134/284 (47%), Gaps = 37/284 (13%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRH 253
+EI L +++G G + W+G DVAVK I +E F QE T+ + H
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDE-----FFQEAQTMMKLSH 62
Query: 254 RFVLQLMGACLEPPYRGWLVTELLGT-TLKEWL--HGLGSQRRKERMVPLPPFEERLARA 310
+++ G C Y ++VTE + L +L HG G L P + L
Sbjct: 63 PKLVKFYGVC-SKEYPIYIVTEYISNGCLLNYLRSHGKG----------LEP-SQLLEMC 110
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF-LSDGEMALTGT--- 366
++ + M +L + + IHRDL N +D V+++DFG R+ L D ++ GT
Sbjct: 111 YDVCEGMAFL--ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP 168
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGK--LR 423
+ APEV YS KSDV++FGI++ E+ + G PY Y +++ ++V +G R
Sbjct: 169 VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY--DLYTNSEVVLKVSQGHRLYR 226
Query: 424 PALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMK 467
P L + + +++ W RP+F + S++ ++ K
Sbjct: 227 PHLASDT-----IYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 130/282 (46%), Gaps = 31/282 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W I + + L +++G G ++ W G VA+K + P F +E +
Sbjct: 4 WEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-----FLEEAQIM 58
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELL--GTTLKEWLHGLGSQRRKERMVPLPPFEER 306
+ +H ++QL E P ++VTE + G+ L G G + +V +
Sbjct: 59 KKLKHDKLVQLYAVVSEEPI--YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDM------ 110
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALTG 365
A ++A M Y+ ++ IHRDL+ +NI + + +IADFG AR + D E A G
Sbjct: 111 ---AAQVAAGMAYI--ERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQG 165
Query: 366 T---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGK 421
+ APE ++ KSDV+SFGI+L E++T G PY + + ++ +V G
Sbjct: 166 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EVLEQVERGY 223
Query: 422 LRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
P +D + L EL+ W D RP+F + L++
Sbjct: 224 RMPC--PQDCPI-SLHELMIHCWKKDPEERPTFEYLQSFLED 262
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W + + + L E++G G ++ + G VAVK + + F E + +
Sbjct: 3 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEANLM 57
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
+ +H+ +++L + P +++TE + +L ++L + + L
Sbjct: 58 KQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLT--------INKLL 107
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALTGT 366
A +IA+ M ++ E+ IHRDL+ +NI + D +IADFG AR + D E A G
Sbjct: 108 DMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 165
Query: 367 ---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ APE I ++ KSDV+SFGI+L EI+T G PY +E G +
Sbjct: 166 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 225
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
RP D EL +L+ L W RP+F + L++
Sbjct: 226 RP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 262
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W + + + L E++G G ++ + G VAVK + + F E + +
Sbjct: 14 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEANLM 68
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
+ +H+ +++L + P +++TE + +L ++L + + L
Sbjct: 69 KQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLT--------INKLL 118
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALTGT 366
A +IA+ M ++ E+ IHRDL+ +NI + D +IADFG AR + D E A G
Sbjct: 119 DMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 176
Query: 367 ---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ APE I ++ KSDV+SFGI+L EI+T G PY +E G +
Sbjct: 177 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 236
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
RP D EL +L+ L W RP+F + L++
Sbjct: 237 RP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 273
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W + + + L E++G G ++ + G VAVK + + F E + +
Sbjct: 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEANLM 62
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
+ +H+ +++L + P +++TE + +L ++L + + L
Sbjct: 63 KQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLT--------INKLL 112
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALTGT 366
A +IA+ M ++ E+ IHRDL+ +NI + D +IADFG AR + D E A G
Sbjct: 113 DMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 170
Query: 367 ---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ APE I ++ KSDV+SFGI+L EI+T G PY +E G +
Sbjct: 171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
RP D EL +L+ L W RP+F + L++
Sbjct: 231 RP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W + + + L E++G G ++ + G VAVK + + F E + +
Sbjct: 10 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEANLM 64
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
+ +H+ +++L + P +++TE + +L ++L + + L
Sbjct: 65 KQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLT--------INKLL 114
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALTGT 366
A +IA+ M ++ E+ IHRDL+ +NI + D +IADFG AR + D E A G
Sbjct: 115 DMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 172
Query: 367 ---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ APE I ++ KSDV+SFGI+L EI+T G PY +E G +
Sbjct: 173 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 232
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
RP D EL +L+ L W RP+F + L++
Sbjct: 233 RP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 269
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W + + + L E++G G ++ + G VAVK + + F E + +
Sbjct: 13 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEANLM 67
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
+ +H+ +++L + P +++TE + +L ++L + + L
Sbjct: 68 KQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLT--------INKLL 117
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALTGT 366
A +IA+ M ++ E+ IHRDL+ +NI + D +IADFG AR + D E A G
Sbjct: 118 DMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 175
Query: 367 ---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ APE I ++ KSDV+SFGI+L EI+T G PY +E G +
Sbjct: 176 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 235
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
RP D EL +L+ L W RP+F + L++
Sbjct: 236 RP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 272
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W + + + L E++G G ++ + G VAVK + + F E + +
Sbjct: 9 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEANLM 63
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
+ +H+ +++L + P +++TE + +L ++L + + L
Sbjct: 64 KQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLT--------INKLL 113
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALTGT 366
A +IA+ M ++ E+ IHRDL+ +NI + D +IADFG AR + D E A G
Sbjct: 114 DMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 171
Query: 367 ---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ APE I ++ KSDV+SFGI+L EI+T G PY +E G +
Sbjct: 172 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 231
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
RP D EL +L+ L W RP+F + L++
Sbjct: 232 RP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 268
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W + + + L E++G G ++ + G VAVK + + F E + +
Sbjct: 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEANLM 62
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
+ +H+ +++L + P +++TE + +L ++L + + L
Sbjct: 63 KQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLT--------INKLL 112
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALTGT 366
A +IA+ M ++ E+ IHRDL+ +NI + D +IADFG AR + D E A G
Sbjct: 113 DMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 170
Query: 367 ---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ APE I ++ KSDV+SFGI+L EI+T G PY +E G +
Sbjct: 171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
RP D EL +L+ L W RP+F + L++
Sbjct: 231 RP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W + + + L E++G G ++ + G VAVK + + F E + +
Sbjct: 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEANLM 62
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
+ +H+ +++L + P +++TE + +L ++L + + L
Sbjct: 63 KQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLT--------INKLL 112
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALTGT 366
A +IA+ M ++ E+ IHRDL+ +NI + D +IADFG AR + D E A G
Sbjct: 113 DMAAQIAEGMAFIEERN--YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 170
Query: 367 ---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ APE I ++ KSDV+SFGI+L EI+T G PY +E G +
Sbjct: 171 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
RP D EL +L+ L W RP+F + L++
Sbjct: 231 RP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 124/296 (41%), Gaps = 39/296 (13%)
Query: 194 PKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRH 253
P ++ E +G+G + R + + + +E F +EV + H
Sbjct: 9 PSDLIHGEVLGKGCFGQAIKVTHR--ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH 66
Query: 254 RFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEI 313
VL+ +G + ++ + G TL+ + + SQ P+ +R++ A +I
Sbjct: 67 PNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQY---------PWSQRVSFAKDI 117
Query: 314 AQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE------------- 360
A M YLH +IHRDL N + + K+V +ADFG AR + D +
Sbjct: 118 ASGMAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPD 175
Query: 361 ----MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAME 416
+ G +MAPE+I Y EK DV+SFGI+L EII + DY P M+
Sbjct: 176 RKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII--GRVNADPDYLPR--TMD 231
Query: 417 VG---EGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMKVT 469
G G L P I + C D D RPSF + L+ ++M +
Sbjct: 232 FGLNVRGFLDRYCPPNCPPSFFPITVRCC--DLDPEKRPSFVKLEHWLETLRMHLA 285
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 150/321 (46%), Gaps = 46/321 (14%)
Query: 164 HRYCSQTPLLQQSDLAVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD--V 221
H +Q PL ++S + + + K + W ++ +++ L E+IG+G ++ R + V
Sbjct: 84 HLLSTQQPLTKKSGVVLHRAVPK-DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLV 142
Query: 222 AVKC----IYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLE--PPYRGWLVTE 275
AVK + PD F QE L + H +++L+G C + P Y +V E
Sbjct: 143 AVKSCRETLPPDLKAK-------FLQEARILKQYSHPNIVRLIGVCTQKQPIY---IVME 192
Query: 276 LL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKP 334
L+ G +L G++ R + + L + A M+YL + IHRDL
Sbjct: 193 LVQGGDFLTFLRTEGARLRVKTL---------LQMVGDAAAGMEYLESKC--CIHRDLAA 241
Query: 335 SNIFLDDAKHVRIADFGHARFLSDGEMALTGTF-----VYMAPEVIQCEPYSEKSDVYSF 389
N + + ++I+DFG +R +DG A +G + APE + YS +SDV+SF
Sbjct: 242 RNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSF 301
Query: 390 GIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE--EDGQLRELIELICLSWDG 446
GI+L E + G PY + + +E G G+L PE D R L+ W
Sbjct: 302 GILLWETFSLGASPYPNLSNQQTREFVEKG-GRL--PCPELCPDAVFR----LMEQCWAY 354
Query: 447 DASVRPSFSSITCSLKNIQMK 467
+ RPSFS+I L++I+ +
Sbjct: 355 EPGQRPSFSTIYQELQSIRKR 375
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 150/321 (46%), Gaps = 46/321 (14%)
Query: 164 HRYCSQTPLLQQSDLAVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD--V 221
H +Q PL ++S + + + K + W ++ +++ L E+IG+G ++ R + V
Sbjct: 84 HLLSTQQPLTKKSGVVLHRAVPK-DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLV 142
Query: 222 AVKC----IYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLE--PPYRGWLVTE 275
AVK + PD F QE L + H +++L+G C + P Y +V E
Sbjct: 143 AVKSCRETLPPDLKAK-------FLQEARILKQYSHPNIVRLIGVCTQKQPIY---IVME 192
Query: 276 LL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKP 334
L+ G +L G++ R + + L + A M+YL + IHRDL
Sbjct: 193 LVQGGDFLTFLRTEGARLRVKTL---------LQMVGDAAAGMEYLESKC--CIHRDLAA 241
Query: 335 SNIFLDDAKHVRIADFGHARFLSDGEMALTGTF-----VYMAPEVIQCEPYSEKSDVYSF 389
N + + ++I+DFG +R +DG A +G + APE + YS +SDV+SF
Sbjct: 242 RNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSF 301
Query: 390 GIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE--EDGQLRELIELICLSWDG 446
GI+L E + G PY + + +E G G+L PE D R L+ W
Sbjct: 302 GILLWETFSLGASPYPNLSNQQTREFVEKG-GRL--PCPELCPDAVFR----LMEQCWAY 354
Query: 447 DASVRPSFSSITCSLKNIQMK 467
+ RPSFS+I L++I+ +
Sbjct: 355 EPGQRPSFSTIYQELQSIRKR 375
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 129/282 (45%), Gaps = 29/282 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
W + + + L E++G G ++ + G VAVK + + F E + +
Sbjct: 4 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-----KQGSMSPDAFLAEANLM 58
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
+ +H+ +++L + P +++TE + +L ++L + + L
Sbjct: 59 KQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLKTPSGIKLT--------INKLL 108
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALTGT 366
A +IA+ M ++ E+ IHR+L+ +NI + D +IADFG AR + D E A G
Sbjct: 109 DMAAQIAEGMAFIEERN--YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA 166
Query: 367 ---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ APE I ++ KSDV+SFGI+L EI+T G PY +E G +
Sbjct: 167 KFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 226
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
RP D EL +L+ L W RP+F + L++
Sbjct: 227 RP-----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 263
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 35/282 (12%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIW-RGLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + + L++K+G G ++ A + + VAVK + P +V F E +
Sbjct: 175 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKP-----GSMSVEAFLAEAN 229
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELL--GTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H +++L + P +++TE + G+ L GS++ PLP
Sbjct: 230 VMKTLQHDKLVKLHAVVTKEPI--YIITEFMAKGSLLDFLKSDEGSKQ------PLPKL- 280
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALT 364
+ + +IA+ M ++ ++ IHRDL+ +NI + + +IADFG AR + + T
Sbjct: 281 --IDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT 336
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLR 423
APE I ++ KSDV+SFGI+L EI+T G PY A+E G R
Sbjct: 337 ------APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR 390
Query: 424 PA-LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P PE EL ++ W RP+F I L +
Sbjct: 391 PENCPE------ELYNIMMRCWKNRPEERPTFEYIQSVLDDF 426
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 136/277 (49%), Gaps = 45/277 (16%)
Query: 192 IDPKEIDLQ-EKIGQGTTANIYRAIWRGLD------VAVKCIYPDFFHTNENAVTFFAQE 244
+DP+E+ + ++IG+G+ +Y+ G+D VA+K I E+ + QE
Sbjct: 15 VDPEELFTKLDRIGKGSFGEVYK----GIDNHTKEVVAIKIID---LEEAEDEIEDIQQE 67
Query: 245 VDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ LS+ ++ + G+ L+ + W++ E LG GS + + P P E
Sbjct: 68 ITVLSQCDSPYITRYFGSYLKST-KLWIIMEYLGG---------GSAL--DLLKPGPLEE 115
Query: 305 ERLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-- 361
+A L EI + + YLH ++ IHRD+K +N+ L + V++ADFG A L+D ++
Sbjct: 116 TYIATILREILKGLDYLHSERK--IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR 173
Query: 362 -ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
GT +MAPEVI+ Y K+D++S GI E+ G P D P ++ + +
Sbjct: 174 NXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP--NSDLHPMRVLFLIPKN 231
Query: 421 KLRPALPEEDGQ----LRELIELICLSWDGDASVRPS 453
+ P +GQ +E +E CL + D RP+
Sbjct: 232 ----SPPTLEGQHSKPFKEFVE-ACL--NKDPRFRPT 261
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 30/285 (10%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVD 246
+ W I + I L +++G G ++ + VAVK + P +V F +E +
Sbjct: 6 DAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKP-----GTMSVQAFLEEAN 60
Query: 247 TLSRQRHRFVLQLMGACL--EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFE 304
+ +H +++L EP Y ++TE + L L S + ++P
Sbjct: 61 LMKTLQHDKLVRLYAVVTREEPIY---IITEYMAKG--SLLDFLKSDEGGKVLLP----- 110
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-AL 363
+ + + +IA+ M Y+ ++ IHRDL+ +N+ + ++ +IADFG AR + D E A
Sbjct: 111 KLIDFSAQIAEGMAYI--ERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR 168
Query: 364 TGT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGE 419
G + APE I ++ KSDV+SFGI+L EI+T G PY + A+ G
Sbjct: 169 EGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGY 228
Query: 420 GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + EL +++ + W A RP+F + L +
Sbjct: 229 -----RMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDF 268
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 16/214 (7%)
Query: 202 KIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMG 261
K+G+G +Y+ VAVK + T E F QE+ +++ +H +++L+G
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 262 ACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLH 321
+ + + +L + L L P + R A A + +LH
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDG-------TPPLSWHMRCKIAQGAANGINFLH 150
Query: 322 EQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF---LSDGEMA--LTGTFVYMAPEVIQ 376
E IHRD+K +NI LD+A +I+DFG AR + M + GT YMAPE ++
Sbjct: 151 ENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALR 208
Query: 377 CEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKP 410
E + KSD+YSFG++L EIITG P +++ +P
Sbjct: 209 GE-ITPKSDIYSFGVVLLEIITG-LPAVDEHREP 240
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 16/214 (7%)
Query: 202 KIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMG 261
K+G+G +Y+ VAVK + T E F QE+ +++ +H +++L+G
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 262 ACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLH 321
+ + + +L + L L P + R A A + +LH
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDG-------TPPLSWHMRCKIAQGAANGINFLH 150
Query: 322 EQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF---LSDGEMA--LTGTFVYMAPEVIQ 376
E IHRD+K +NI LD+A +I+DFG AR + M + GT YMAPE ++
Sbjct: 151 ENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALR 208
Query: 377 CEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKP 410
E + KSD+YSFG++L EIITG P +++ +P
Sbjct: 209 GE-ITPKSDIYSFGVVLLEIITG-LPAVDEHREP 240
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 16/214 (7%)
Query: 202 KIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMG 261
K+G+G +Y+ VAVK + T E F QE+ +++ +H +++L+G
Sbjct: 32 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 262 ACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLH 321
+ + + +L + L L P + R A A + +LH
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLDG-------TPPLSWHMRCKIAQGAANGINFLH 144
Query: 322 EQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF---LSDGEMA--LTGTFVYMAPEVIQ 376
E IHRD+K +NI LD+A +I+DFG AR + M + GT YMAPE ++
Sbjct: 145 ENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR 202
Query: 377 CEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKP 410
E + KSD+YSFG++L EIITG P +++ +P
Sbjct: 203 GE-ITPKSDIYSFGVVLLEIITG-LPAVDEHREP 234
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 131/284 (46%), Gaps = 30/284 (10%)
Query: 189 GWYIDPKEIDLQEKIGQGTTANIYRAIWRG-LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
W I + I L +K+G G ++ + VAVK + P +V F +E +
Sbjct: 6 AWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKP-----GTMSVQAFLEEANL 60
Query: 248 LSRQRHRFVLQLMGACL--EPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEE 305
+ +H +++L EP Y ++TE + L L S + ++P +
Sbjct: 61 MKTLQHDKLVRLYAVVTKEEPIY---IITEFMAKG--SLLDFLKSDEGGKVLLP-----K 110
Query: 306 RLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM-ALT 364
+ + +IA+ M Y+ ++ IHRDL+ +N+ + ++ +IADFG AR + D E A
Sbjct: 111 LIDFSAQIAEGMAYI--ERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 168
Query: 365 GT---FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEG 420
G + APE I ++ KS+V+SFGI+L EI+T G PY + A+ G
Sbjct: 169 GAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGY- 227
Query: 421 KLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + EL +++ + W A RP+F + L +
Sbjct: 228 ----RMPRMENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDF 267
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 123/264 (46%), Gaps = 16/264 (6%)
Query: 199 LQEKIGQGTTANIYRA--IWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFV 256
+++KIG+G + +YRA + G+ VA+K + F + A +E+D L + H V
Sbjct: 36 IEKKIGRGQFSEVYRAACLLDGVPVALKKV-QIFDLMDAKARADCIKEIDLLKQLNHPNV 94
Query: 257 LQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQA 316
++ + +E ++ L + Q+R L P +++ A
Sbjct: 95 IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKR------LIPERTVWKYFVQLCSA 148
Query: 317 MQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA---LTGTFVYMAPE 373
++++H ++ V+HRD+KP+N+F+ V++ D G RF S A L GT YM+PE
Sbjct: 149 LEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE 206
Query: 374 VIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALPEEDGQL 433
I Y+ KSD++S G +L E+ P+ + ++ + P LP D
Sbjct: 207 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY-PPLP-SDHYS 264
Query: 434 RELIELICLSWDGDASVRPSFSSI 457
EL +L+ + + D RP + +
Sbjct: 265 EELRQLVNMCINPDPEKRPDVTYV 288
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 113/225 (50%), Gaps = 22/225 (9%)
Query: 193 DPKEIDLQEKIGQGTTANIY--RAIWR---GLDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
DP +L + +GQG+ ++ R + R G A+K + + T E D
Sbjct: 26 DPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT--KMERDI 83
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
L+ H FV++L A + + +L+ + L L ++ KE M + L
Sbjct: 84 LADVNHPFVVKLHYA-FQTEGKLYLILDFLRGG------DLFTRLSKEVMFTEEDVKFYL 136
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE---MALT 364
A E+A + +LH +I+RDLKP NI LD+ H+++ DFG ++ D E +
Sbjct: 137 A---ELALGLDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC 191
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT YMAPEV+ + +S +D +S+G+++ E++TG+ P+ KD K
Sbjct: 192 GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRK 236
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 31/290 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGL-------DVAVKCIYPDFFHTNENAVTF-- 240
W + ++I + ++GQG+ +Y + +G+ VA+K + NE A
Sbjct: 5 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRER 57
Query: 241 --FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMV 298
F E + V++L+G + ++ + LK +L L + ++
Sbjct: 58 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 117
Query: 299 PLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P + + A EIA M YL+ K +HRDL N + + V+I DFG R + +
Sbjct: 118 APPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 175
Query: 359 GEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAK 412
+ G +M+PE ++ ++ SDV+SFG++L EI T PY + +
Sbjct: 176 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--QGLSNEQ 233
Query: 413 IAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
+ V EG L L + D L+EL+ + W + +RPSF I S+K
Sbjct: 234 VLRFVMEGGL---LDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 280
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 141/334 (42%), Gaps = 50/334 (14%)
Query: 155 HQHSHQTPLHRYCSQTPLLQQSDLAVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRA 214
H + PL +C + P + W ++L + +G+G + A
Sbjct: 1 HMDPDELPLDEHCERLPY-------------DASKWEFPRDRLNLGKPLGRGAFGQVIEA 47
Query: 215 IWRGLD-------VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF-VLQLMGACLEP 266
G+D VAVK + H+ A+ E+ L H V+ L+GAC +P
Sbjct: 48 DAFGIDKTATCRTVAVKMLKEGATHSEHRALM---SELKILIHIGHHLNVVNLLGACTKP 104
Query: 267 PYRGWLVTEL-----LGTTLKEWLHGLGSQRRKERMVP-LPPFEERLARALEIAQAMQYL 320
++ E L T L+ + + E + E + + ++A+ M++L
Sbjct: 105 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL 164
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDGEMALTGT----FVYMAPEVI 375
+K IHRDL NI L + V+I DFG AR D + G +MAPE I
Sbjct: 165 ASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETI 222
Query: 376 QCEPYSEKSDVYSFGIILNEIIT-GNHPY----IEKDYKPAKIAMEVGEGKLRPALPEED 430
Y+ +SDV+SFG++L EI + G PY I++++ + EG A D
Sbjct: 223 FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-----CRRLKEGTRMRA---PD 274
Query: 431 GQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
E+ + + W G+ S RP+FS + L N+
Sbjct: 275 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGL-------DVAVKCIYPDFFHTNENAVTF-- 240
W + ++I + ++GQG+ +Y + +G+ VA+K + NE A
Sbjct: 14 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRER 66
Query: 241 --FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMV 298
F E + V++L+G + ++ + LK +L L + ++
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 299 PLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P + + A EIA M YL+ K +HRDL N + + V+I DFG R + +
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 359 GEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAK 412
+ G +M+PE ++ ++ SDV+SFG++L EI T PY + +
Sbjct: 185 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--QGLSNEQ 242
Query: 413 IAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
+ V EG L L + D L EL+ + W + +RPSF I S+K
Sbjct: 243 VLRFVMEGGL---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 140/337 (41%), Gaps = 67/337 (19%)
Query: 160 QTPLHRYCSQTPLLQQSDLAVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWRGL 219
+ PL +C + P + W + L + +G+G + A G+
Sbjct: 7 ELPLDEHCERLPY-------------DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGI 53
Query: 220 D-------VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF-VLQLMGACLEPPYRGW 271
D VAVK + H+ A+ E+ L H V+ L+GAC +P
Sbjct: 54 DKTATXRTVAVKMLKEGATHSEHRALM---SELKILIHIGHHLNVVNLLGACTKPGGPLM 110
Query: 272 LVTEL-----LGTTLKEWLHGLGSQRRKERMVPLPP---------FEERLARALEIAQAM 317
++ E L T L+ ++ VP P E + + ++A+ M
Sbjct: 111 VIVEFCKFGNLSTYLRS---------KRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGM 161
Query: 318 QYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDGEMALTGT----FVYMAP 372
++L +K IHRDL NI L + V+I DFG AR D + G +MAP
Sbjct: 162 EFLASRK--XIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAP 219
Query: 373 EVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY----IEKDYKPAKIAMEVGEGKLRPALP 427
E I Y+ +SDV+SFG++L EI + G PY I++++ + EG A
Sbjct: 220 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-----CRRLKEGTRMRA-- 272
Query: 428 EEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
D E+ + + W G+ S RP+FS + L N+
Sbjct: 273 -PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 134/302 (44%), Gaps = 42/302 (13%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-------VAVKCIYPDFFHTNENAVTFFA 242
W + L + +G+G + A G+D VAVK + H+ A+
Sbjct: 13 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM--- 69
Query: 243 QEVDTLSRQRHRF-VLQLMGACLEPPYRGWLVTELLG-TTLKEWLHGLGSQRRKERMVP- 299
E+ L H V+ L+GAC +P ++TE L +L ++ ++ P
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 300 -----LPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR 354
E + + ++A+ M++L +K IHRDL NI L + V+I DFG AR
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 355 -------FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY--- 403
++ G+ L +MAPE I Y+ +SDV+SFG++L EI + G PY
Sbjct: 188 DIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
Query: 404 -IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
I++++ + EG A D E+ + + W G+ S RP+FS + L
Sbjct: 246 KIDEEF-----CRRLKEGTRMRA---PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 297
Query: 463 NI 464
N+
Sbjct: 298 NL 299
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 134/302 (44%), Gaps = 42/302 (13%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-------VAVKCIYPDFFHTNENAVTFFA 242
W + L + +G+G + A G+D VAVK + H+ A+
Sbjct: 13 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM--- 69
Query: 243 QEVDTLSRQRHRF-VLQLMGACLEPPYRGWLVTELLG-TTLKEWLHGLGSQRRKERMVP- 299
E+ L H V+ L+GAC +P ++TE L +L ++ ++ P
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 300 -----LPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR 354
E + + ++A+ M++L +K IHRDL NI L + V+I DFG AR
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 355 -------FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY--- 403
++ G+ L +MAPE I Y+ +SDV+SFG++L EI + G PY
Sbjct: 188 DIYKDPDYVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 245
Query: 404 -IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
I++++ + EG A D E+ + + W G+ S RP+FS + L
Sbjct: 246 KIDEEF-----CRRLKEGTRMRA---PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 297
Query: 463 NI 464
N+
Sbjct: 298 NL 299
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 201 EKIGQGTTANIYRA--IWRGLDVAVKCIY--PDFFHTNENAVTFFAQEVDTLSRQRHRFV 256
+K+G G + +Y A + VA+K I+ P E + F +EV S+ H+ +
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPP---REKEETLKRFEREVHNSSQLSHQNI 73
Query: 257 LQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQA 316
+ ++ E ++ + G TL E++ G PL + + +I
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG---------PLS-VDTAINFTNQILDG 123
Query: 317 MQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALT----GTFVYMAP 372
+++ H+ + ++HRD+KP NI +D K ++I DFG A+ LS+ + T GT Y +P
Sbjct: 124 IKHAHDMR--IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSP 181
Query: 373 EVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
E + E E +D+YS GI+L E++ G P+
Sbjct: 182 EQAKGEATDECTDIYSIGIVLYEMLVGEPPF 212
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 132/300 (44%), Gaps = 38/300 (12%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-------VAVKCIYPDFFHTNENAVTFFA 242
W + L + +G+G + A G+D VAVK + H+ A+
Sbjct: 13 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM--- 69
Query: 243 QEVDTLSRQRHRF-VLQLMGACLEPPYRGWLVTELLG-TTLKEWLHGLGSQRRKERMVP- 299
E+ L H V+ L+GAC +P ++TE L +L ++ ++ P
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 300 -----LPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR 354
E + + ++A+ M++L +K IHRDL NI L + V+I DFG AR
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 355 -FLSDGEMALTGT----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY----I 404
D + G +MAPE I Y+ +SDV+SFG++L EI + G PY I
Sbjct: 188 DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 247
Query: 405 EKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++++ + EG A D E+ + + W G+ S RP+FS + L N+
Sbjct: 248 DEEF-----CRRLKEGTRMRA---PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 147/336 (43%), Gaps = 49/336 (14%)
Query: 143 SVIASPLVQTPLHQHSHQTPLHRYCSQTPLLQQSDLAVTVSQAKMNGWYIDPKEIDLQEK 202
S I+SPL+Q +H + P L Q+ V + + + + E
Sbjct: 12 SDISSPLLQNTVHI--------DLSALNPELVQAVQHVVIGPSSL--------IVHFNEV 55
Query: 203 IGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVL 257
IG+G +Y + + AVK + T+ V+ F E + H VL
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 258 QLMGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARALEIAQA 316
L+G CL +V + HG L + R E P ++ + L++A+
Sbjct: 113 SLLGICLRSEGSPLVVLPYMK-------HGDLRNFIRNETHNP--TVKDLIGFGLQVAKG 163
Query: 317 MQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL----TGTFV---Y 369
M+YL +K +HRDL N LD+ V++ADFG AR + D E TG + +
Sbjct: 164 MKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW 221
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L+P
Sbjct: 222 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP 281
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ L E++ W A +RPSFS + + I
Sbjct: 282 D-----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 146/334 (43%), Gaps = 49/334 (14%)
Query: 145 IASPLVQTPLHQHSHQTPLHRYCSQTPLLQQSDLAVTVSQAKMNGWYIDPKEIDLQEKIG 204
I+SPL+Q +H + P L Q+ V + + + + E IG
Sbjct: 15 ISSPLLQNTVHI--------DLSALNPELVQAVQHVVIGPSSL--------IVHFNEVIG 58
Query: 205 QGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G +Y + + AVK + T+ V+ F E + H VL L
Sbjct: 59 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 260 MGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
+G CL +V + HG L + R E P ++ + L++A+ M+
Sbjct: 116 LGICLRSEGSPLVVLPYMK-------HGDLRNFIRNETHNP--TVKDLIGFGLQVAKGMK 166
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL----TGTFV---YMA 371
YL +K +HRDL N LD+ V++ADFG AR + D E TG + +MA
Sbjct: 167 YLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 372 PEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPEED 430
E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L+P +
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD- 283
Query: 431 GQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
L E++ W A +RPSFS + + I
Sbjct: 284 ----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 197 IDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
+ E IG+G +Y + + AVK + T+ V+ F E +
Sbjct: 31 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDF 87
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARA 310
H VL L+G CL +V + HG L + R E P ++ +
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMK-------HGDLRNFIRNETHNP--TVKDLIGFG 138
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL----TGT 366
L++A+ M+YL +K +HRDL N LD+ V++ADFG AR + D E TG
Sbjct: 139 LQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGA 196
Query: 367 FV---YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ +MA E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 256
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + L E++ W A +RPSFS + + I
Sbjct: 257 QPEYCPD-----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 116/257 (45%), Gaps = 38/257 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ E + F +E++ L +H +++ G C R L+ E L +L+E+L
Sbjct: 52 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL---- 107
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
Q+ KER+ + + L +I + M+YL ++ IHRDL NI +++ V+I D
Sbjct: 108 -QKHKERIDHI----KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGD 160
Query: 350 FGHARFL-SDGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG + L D E + APE + +S SDV+SFG++L E+ T Y
Sbjct: 161 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----Y 216
Query: 404 IEKDYK-PAKIAMEVGEGKL--------------RPALPEEDGQLRELIELICLSWDGDA 448
IEK PA+ +G K LP DG E+ ++ W+ +
Sbjct: 217 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 276
Query: 449 SVRPSFSSITCSLKNIQ 465
+ RPSF + + I+
Sbjct: 277 NQRPSFRDLALRVDQIR 293
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 193 DPKEIDLQEKIGQGTTANIY--RAIWRGLDV----AVKCIYPDFFHTNENAVTFFAQEVD 246
DP + +L + +GQG+ ++ + I G D A+K + + T E D
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKI-SGSDARQLYAMKVLKKATLKVRDRVRT--KMERD 78
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER 306
L H F+++L A + + +L+ + L L ++ KE M +
Sbjct: 79 ILVEVNHPFIVKLHYA-FQTEGKLYLILDFLRGG------DLFTRLSKEVMFTEEDVKFY 131
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE---MAL 363
LA E+A A+ +LH +I+RDLKP NI LD+ H+++ DFG ++ D E +
Sbjct: 132 LA---ELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 364 TGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT YMAPEV+ +++ +D +SFG+++ E++TG P+ KD K
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK 232
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 75/123 (60%), Gaps = 18/123 (14%)
Query: 280 TLKEWLHGLGSQRRKERM---VPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSN 336
TL++W+ +RR E++ + L FE+ I + + Y+H +K +IHRDLKPSN
Sbjct: 120 TLEQWIE----KRRGEKLDKVLALELFEQ-------ITKGVDYIHSKK--LIHRDLKPSN 166
Query: 337 IFLDDAKHVRIADFGHARFL-SDGEMALT-GTFVYMAPEVIQCEPYSEKSDVYSFGIILN 394
IFL D K V+I DFG L +DG+ + GT YM+PE I + Y ++ D+Y+ G+IL
Sbjct: 167 IFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILA 226
Query: 395 EII 397
E++
Sbjct: 227 ELL 229
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGL-------DVAVKCIYPDFFHTNENAVTF-- 240
W + ++I + ++GQG+ +Y + +G+ VA+K + NE A
Sbjct: 7 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRER 59
Query: 241 --FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMV 298
F E + V++L+G + ++ + LK +L L + ++
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 299 PLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P + + A EIA M YL+ K +HRDL N + + V+I DFG R + +
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 177
Query: 359 GEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAK 412
+ G +M+PE ++ ++ SDV+SFG++L EI T PY + +
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--QGLSNEQ 235
Query: 413 IAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
+ V EG L L + D L EL+ + W + +RPSF I S+K
Sbjct: 236 VLRFVMEGGL---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 197 IDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
+ E IG+G +Y + + AVK + T+ V+ F E +
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDF 88
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARA 310
H VL L+G CL +V + HG L + R E P ++ +
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMK-------HGDLRNFIRNETHNP--TVKDLIGFG 139
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL----TGT 366
L++A+ M+YL +K +HRDL N LD+ V++ADFG AR + D E TG
Sbjct: 140 LQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 197
Query: 367 FV---YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ +MA E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 257
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + L E++ W A +RPSFS + + I
Sbjct: 258 QPEYCPD-----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 193 DPKEIDLQEKIGQGTTANIY--RAIWRGLDV----AVKCIYPDFFHTNENAVTFFAQEVD 246
DP + +L + +GQG+ ++ + I G D A+K + + T E D
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLVKKI-SGSDARQLYAMKVLKKATLKVRDRVRT--KMERD 79
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER 306
L H F+++L A + + +L+ + L L ++ KE M +
Sbjct: 80 ILVEVNHPFIVKLHYA-FQTEGKLYLILDFLRGG------DLFTRLSKEVMFTEEDVKFY 132
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE---MAL 363
LA E+A A+ +LH +I+RDLKP NI LD+ H+++ DFG ++ D E +
Sbjct: 133 LA---ELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 187
Query: 364 TGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT YMAPEV+ +++ +D +SFG+++ E++TG P+ KD K
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK 233
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 197 IDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
+ E IG+G +Y + + AVK + T+ V+ F E +
Sbjct: 31 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDF 87
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARA 310
H VL L+G CL +V + HG L + R E P ++ +
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMK-------HGDLRNFIRNETHNP--TVKDLIGFG 138
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL----TGT 366
L++A+ M+YL +K +HRDL N LD+ V++ADFG AR + D E TG
Sbjct: 139 LQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 196
Query: 367 FV---YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ +MA E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L
Sbjct: 197 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 256
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + L E++ W A +RPSFS + + I
Sbjct: 257 QPEYCPD-----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 197 IDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
+ E IG+G +Y + + AVK + T+ V+ F E +
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDF 88
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARA 310
H VL L+G CL +V + HG L + R E P ++ +
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMK-------HGDLRNFIRNETHNP--TVKDLIGFG 139
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL----TGT 366
L++A+ M+YL +K +HRDL N LD+ V++ADFG AR + D E TG
Sbjct: 140 LQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 197
Query: 367 FV---YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ +MA E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 257
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + L E++ W A +RPSFS + + I
Sbjct: 258 QPEYCPD-----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGL-------DVAVKCIYPDFFHTNENAVTF-- 240
W + ++I + ++GQG+ +Y + +G+ VA+K + NE A
Sbjct: 42 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRER 94
Query: 241 --FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMV 298
F E + V++L+G + ++ + LK +L L + ++
Sbjct: 95 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 299 PLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P + + A EIA M YL+ K +HRDL N + + V+I DFG R + +
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 212
Query: 359 GEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAK 412
+ G +M+PE ++ ++ SDV+SFG++L EI T PY + +
Sbjct: 213 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--QGLSNEQ 270
Query: 413 IAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
+ V EG L L + D L EL+ + W + +RPSF I S+K
Sbjct: 271 VLRFVMEGGL---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 317
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGL-------DVAVKCIYPDFFHTNENAVTF-- 240
W + ++I + ++GQG+ +Y + +G+ VA+K + NE A
Sbjct: 14 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRER 66
Query: 241 --FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMV 298
F E + V++L+G + ++ + LK +L L + ++
Sbjct: 67 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 299 PLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P + + A EIA M YL+ K +HRDL N + + V+I DFG R + +
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 184
Query: 359 GEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAK 412
+ G +M+PE ++ ++ SDV+SFG++L EI T PY + +
Sbjct: 185 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--QGLSNEQ 242
Query: 413 IAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
+ V EG L L + D L EL+ + W + +RPSF I S+K
Sbjct: 243 VLRFVMEGGL---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 197 IDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
+ E IG+G +Y + + AVK + T+ V+ F E +
Sbjct: 29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDF 85
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARA 310
H VL L+G CL +V + HG L + R E P ++ +
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMK-------HGDLRNFIRNETHNP--TVKDLIGFG 136
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL----TGT 366
L++A+ M+YL +K +HRDL N LD+ V++ADFG AR + D E TG
Sbjct: 137 LQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 194
Query: 367 FV---YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ +MA E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L
Sbjct: 195 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 254
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + L E++ W A +RPSFS + + I
Sbjct: 255 QPEYCPD-----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGL-------DVAVKCIYPDFFHTNENAVTF-- 240
W + ++I + ++GQG+ +Y + +G+ VA+K + NE A
Sbjct: 13 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRER 65
Query: 241 --FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMV 298
F E + V++L+G + ++ + LK +L L + ++
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 299 PLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P + + A EIA M YL+ K +HRDL N + + V+I DFG R + +
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 359 GEMALTG-----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAK 412
+ G +M+PE ++ ++ SDV+SFG++L EI T PY + +
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--QGLSNEQ 241
Query: 413 IAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
+ V EG L L + D L EL+ + W + +RPSF I S+K
Sbjct: 242 VLRFVMEGGL---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 31/290 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGL-------DVAVKCIYPDFFHTNENAVTF-- 240
W + ++I + ++GQG+ +Y + +G+ VA+K + NE A
Sbjct: 7 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRER 59
Query: 241 --FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMV 298
F E + V++L+G + ++ + LK +L L + ++
Sbjct: 60 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 299 PLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P + + A EIA M YL+ K +HRDL N + + V+I DFG R + +
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE 177
Query: 359 GEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAK 412
+ G +M+PE ++ ++ SDV+SFG++L EI T PY + +
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--QGLSNEQ 235
Query: 413 IAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
+ V EG L L + D L+EL+ + W + +RPSF I S+K
Sbjct: 236 VLRFVMEGGL---LDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGL-------DVAVKCIYPDFFHTNENAVTF-- 240
W + ++I + ++GQG+ +Y + +G+ VA+K + NE A
Sbjct: 11 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRER 63
Query: 241 --FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMV 298
F E + V++L+G + ++ + LK +L L + ++
Sbjct: 64 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 299 PLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P + + A EIA M YL+ K +HRDL N + + V+I DFG R + +
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 181
Query: 359 GEMALTG-----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAK 412
+ G +M+PE ++ ++ SDV+SFG++L EI T PY + +
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--QGLSNEQ 239
Query: 413 IAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
+ V EG L L + D L EL+ + W + +RPSF I S+K
Sbjct: 240 VLRFVMEGGL---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 286
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGL-------DVAVKCIYPDFFHTNENAVTF-- 240
W + ++I + ++GQG+ +Y + +G+ VA+K + NE A
Sbjct: 13 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRER 65
Query: 241 --FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMV 298
F E + V++L+G + ++ + LK +L L + ++
Sbjct: 66 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 299 PLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P + + A EIA M YL+ K +HRDL N + + V+I DFG R + +
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 183
Query: 359 GEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAK 412
+ G +M+PE ++ ++ SDV+SFG++L EI T PY + +
Sbjct: 184 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--QGLSNEQ 241
Query: 413 IAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
+ V EG L L + D L EL+ + W + +RPSF I S+K
Sbjct: 242 VLRFVMEGGL---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 197 IDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
+ E IG+G +Y + + AVK + T+ V+ F E +
Sbjct: 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDF 83
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARA 310
H VL L+G CL +V + HG L + R E P ++ +
Sbjct: 84 SHPNVLSLLGICLRSEGSPLVVLPYMK-------HGDLRNFIRNETHNP--TVKDLIGFG 134
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL----TGT 366
L++A+ M+YL +K +HRDL N LD+ V++ADFG AR + D E TG
Sbjct: 135 LQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 192
Query: 367 FV---YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ +MA E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L
Sbjct: 193 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 252
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + L E++ W A +RPSFS + + I
Sbjct: 253 QPEYCPD-----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 197 IDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
+ E IG+G +Y + + AVK + T+ V+ F E +
Sbjct: 24 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDF 80
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARA 310
H VL L+G CL +V + HG L + R E P ++ +
Sbjct: 81 SHPNVLSLLGICLRSEGSPLVVLPYMK-------HGDLRNFIRNETHNP--TVKDLIGFG 131
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL----TGT 366
L++A+ M+YL +K +HRDL N LD+ V++ADFG AR + D E TG
Sbjct: 132 LQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 189
Query: 367 FV---YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ +MA E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L
Sbjct: 190 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 249
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + L E++ W A +RPSFS + + I
Sbjct: 250 QPEYCPD-----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 197 IDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
+ E IG+G +Y + + AVK + T+ V+ F E +
Sbjct: 30 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDF 86
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARA 310
H VL L+G CL +V + HG L + R E P ++ +
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMK-------HGDLRNFIRNETHNP--TVKDLIGFG 137
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL----TGT 366
L++A+ M+YL +K +HRDL N LD+ V++ADFG AR + D E TG
Sbjct: 138 LQVAKGMKYLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 195
Query: 367 FV---YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ +MA E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 255
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + L E++ W A +RPSFS + + I
Sbjct: 256 QPEYCPD-----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 24/226 (10%)
Query: 193 DPKEIDLQEKIGQGTTANIY--RAIWRGLDV----AVKCIYPDFFHTNENAVTFFAQEVD 246
DP + +L + +GQG+ ++ + I G D A+K + + T E D
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKI-SGSDARQLYAMKVLKKATLKVRDRVRT--KMERD 78
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER 306
L H F+++L A + + +L+ + L L ++ KE M +
Sbjct: 79 ILVEVNHPFIVKLHYA-FQTEGKLYLILDFLRGG------DLFTRLSKEVMFTEEDVKFY 131
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE---MAL 363
LA E+A A+ +LH +I+RDLKP NI LD+ H+++ DFG ++ D E +
Sbjct: 132 LA---ELALALDHLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 186
Query: 364 TGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT YMAPEV+ +++ +D +SFG+++ E++TG P+ KD K
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK 232
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGL-------DVAVKCIYPDFFHTNENAVTF-- 240
W + ++I + ++GQG+ +Y + +G+ VA+K + NE A
Sbjct: 20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRER 72
Query: 241 --FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMV 298
F E + V++L+G + ++ + LK +L L + ++
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 299 PLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P + + A EIA M YL+ K +HRDL N + + V+I DFG R + +
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 359 GEMALTG-----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAK 412
+ G +M+PE ++ ++ SDV+SFG++L EI T PY + +
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--QGLSNEQ 248
Query: 413 IAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
+ V EG L L + D L EL+ + W + +RPSF I S+K
Sbjct: 249 VLRFVMEGGL---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 142/337 (42%), Gaps = 69/337 (20%)
Query: 160 QTPLHRYCSQTPLLQQSDLAVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWRGL 219
+ PL +C + P + W ++L + +G+G + A G+
Sbjct: 5 ELPLDEHCERLPY-------------DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGI 51
Query: 220 D-------VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF-VLQLMGACLEPPYRGW 271
D VAVK + H+ A+ E+ L H V+ L+GAC +P
Sbjct: 52 DKTATXRTVAVKMLKEGATHSEHRALM---SELKILIHIGHHLNVVNLLGACTKPGGPLM 108
Query: 272 LVTEL-----LGTTLKEWLHGLGSQRRKERMVP-------LPPFEERLARALEIAQAMQY 319
++ E L T L+ ++ VP E + + ++A+ M++
Sbjct: 109 VIVEFCKFGNLSTYLRS---------KRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEF 159
Query: 320 LHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-------FLSDGEMALTGTFVYMAP 372
L +K IHRDL NI L + V+I DFG AR ++ G+ L +MAP
Sbjct: 160 LASRK--XIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAP 215
Query: 373 EVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY----IEKDYKPAKIAMEVGEGKLRPALP 427
E I Y+ +SDV+SFG++L EI + G PY I++++ + EG A
Sbjct: 216 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-----CRRLKEGTRMRA-- 268
Query: 428 EEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
D E+ + + W G+ S RP+FS + L N+
Sbjct: 269 -PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 15/172 (8%)
Query: 301 PPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
P ++ ++ L++A+ M+YL EQK +HRDL N LD++ V++ADFG AR + D E
Sbjct: 121 PTVKDLISFGLQVARGMEYLAEQK--FVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178
Query: 361 MALTG-------TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAK 412
+ A E +Q ++ KSDV+SFG++L E++T G PY D P
Sbjct: 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID--PFD 236
Query: 413 IAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ + +G+ LP+ + L +++ W+ D +VRP+F + ++ I
Sbjct: 237 LTHFLAQGR---RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 141/332 (42%), Gaps = 55/332 (16%)
Query: 160 QTPLHRYCSQTPLLQQSDLAVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWRGL 219
+ PL +C + P + W + L + +G+G + A G+
Sbjct: 42 ELPLDEHCERLPY-------------DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGI 88
Query: 220 D-------VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF-VLQLMGACLEPPYRGW 271
D VAVK + H+ A+ E+ L H V+ L+GAC +P
Sbjct: 89 DKTATCRTVAVKMLKEGATHSEHRALM---SELKILIHIGHHLNVVNLLGACTKPGGPLM 145
Query: 272 LVTELLG-TTLKEWLHGLGSQRRKERMVP------LPPFEERLARALEIAQAMQYLHEQK 324
++ E L +L ++ ++ P E + + ++A+ M++L +K
Sbjct: 146 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 205
Query: 325 PKVIHRDLKPSNIFLDDAKHVRIADFGHAR-------FLSDGEMALTGTFVYMAPEVIQC 377
IHRDL NI L + V+I DFG AR ++ G+ L +MAPE I
Sbjct: 206 --CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFD 261
Query: 378 EPYSEKSDVYSFGIILNEIIT-GNHPY----IEKDYKPAKIAMEVGEGKLRPALPEEDGQ 432
Y+ +SDV+SFG++L EI + G PY I++++ + EG A D
Sbjct: 262 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-----CRRLKEGTRMRA---PDYT 313
Query: 433 LRELIELICLSWDGDASVRPSFSSITCSLKNI 464
E+ + + W G+ S RP+FS + L N+
Sbjct: 314 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 40/258 (15%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ E + F +E++ L +H +++ G C R L+ E L +L+++L
Sbjct: 49 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---- 104
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
Q+ KER+ + + L +I + M+YL ++ IHRDL NI +++ V+I D
Sbjct: 105 -QKHKERIDHI----KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGD 157
Query: 350 FGHAR-------FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHP 402
FG + F E + F Y APE + +S SDV+SFG++L E+ T
Sbjct: 158 FGLTKVLPQDKEFFKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFT---- 212
Query: 403 YIEKDYK-PAKIAMEVGEGKL--------------RPALPEEDGQLRELIELICLSWDGD 447
YIEK PA+ +G K LP DG E+ ++ W+ +
Sbjct: 213 YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNN 272
Query: 448 ASVRPSFSSITCSLKNIQ 465
+ RPSF + + I+
Sbjct: 273 VNQRPSFRDLALRVDQIR 290
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 142/337 (42%), Gaps = 69/337 (20%)
Query: 160 QTPLHRYCSQTPLLQQSDLAVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWRGL 219
+ PL +C + P + W ++L + +G+G + A G+
Sbjct: 5 ELPLDEHCERLPY-------------DASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGI 51
Query: 220 D-------VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF-VLQLMGACLEPPYRGW 271
D VAVK + H+ A+ E+ L H V+ L+GAC +P
Sbjct: 52 DKTATXRTVAVKMLKEGATHSEHRALM---SELKILIHIGHHLNVVNLLGACTKPGGPLM 108
Query: 272 LVTEL-----LGTTLKEWLHGLGSQRRKERMVP-------LPPFEERLARALEIAQAMQY 319
++ E L T L+ ++ VP E + + ++A+ M++
Sbjct: 109 VIVEFCKFGNLSTYLRS---------KRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEF 159
Query: 320 LHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-------FLSDGEMALTGTFVYMAP 372
L +K IHRDL NI L + V+I DFG AR ++ G+ L +MAP
Sbjct: 160 LASRK--XIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL--PLKWMAP 215
Query: 373 EVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY----IEKDYKPAKIAMEVGEGKLRPALP 427
E I Y+ +SDV+SFG++L EI + G PY I++++ + EG A
Sbjct: 216 ETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-----XRRLKEGTRMRA-- 268
Query: 428 EEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
D E+ + + W G+ S RP+FS + L N+
Sbjct: 269 -PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALTGTF 367
A EI ++ LH ++ +++RDLKP NI LDD H+RI+D G A + +G+ GT
Sbjct: 292 AAEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTV 349
Query: 368 VYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALP 427
YMAPEV++ E Y+ D ++ G +L E+I G P+ ++ K + +E +L +P
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE----RLVKEVP 405
Query: 428 EE 429
EE
Sbjct: 406 EE 407
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 197 IDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
+ E IG+G +Y + + AVK + T+ V+ F E +
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDF 88
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARA 310
H VL L+G CL +V + HG L + R E P ++ +
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMK-------HGDLRNFIRNETHNP--TVKDLIGFG 139
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM----ALTGT 366
L++A+ M++L +K +HRDL N LD+ V++ADFG AR + D E TG
Sbjct: 140 LQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 197
Query: 367 FV---YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ +MA E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 257
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + L E++ W A +RPSFS + + I
Sbjct: 258 QPEYCPD-----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 141/332 (42%), Gaps = 55/332 (16%)
Query: 160 QTPLHRYCSQTPLLQQSDLAVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWRGL 219
+ PL +C + P + W + L + +G+G + A G+
Sbjct: 5 ELPLDEHCERLPY-------------DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGI 51
Query: 220 D-------VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF-VLQLMGACLEPPYRGW 271
D VAVK + H+ A+ E+ L H V+ L+GAC +P
Sbjct: 52 DKTATCRTVAVKMLKEGATHSEHRALM---SELKILIHIGHHLNVVNLLGACTKPGGPLM 108
Query: 272 LVTELLG-TTLKEWLHGLGSQRRKERMVP------LPPFEERLARALEIAQAMQYLHEQK 324
++ E L +L ++ ++ P E + + ++A+ M++L +K
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 168
Query: 325 PKVIHRDLKPSNIFLDDAKHVRIADFGHAR-------FLSDGEMALTGTFVYMAPEVIQC 377
IHRDL NI L + V+I DFG AR ++ G+ L +MAPE I
Sbjct: 169 --CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFD 224
Query: 378 EPYSEKSDVYSFGIILNEIIT-GNHPY----IEKDYKPAKIAMEVGEGKLRPALPEEDGQ 432
Y+ +SDV+SFG++L EI + G PY I++++ + EG A D
Sbjct: 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-----CRRLKEGTRMRA---PDYT 276
Query: 433 LRELIELICLSWDGDASVRPSFSSITCSLKNI 464
E+ + + W G+ S RP+FS + L N+
Sbjct: 277 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALTGTF 367
A EI ++ LH ++ +++RDLKP NI LDD H+RI+D G A + +G+ GT
Sbjct: 292 AAEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTV 349
Query: 368 VYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALP 427
YMAPEV++ E Y+ D ++ G +L E+I G P+ ++ K + +E +L +P
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE----RLVKEVP 405
Query: 428 EE 429
EE
Sbjct: 406 EE 407
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 197 IDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
+ E IG+G +Y + + AVK + T+ V+ F E +
Sbjct: 30 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDF 86
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARA 310
H VL L+G CL +V + HG L + R E P ++ +
Sbjct: 87 SHPNVLSLLGICLRSEGSPLVVLPYMK-------HGDLRNFIRNETHNP--TVKDLIGFG 137
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM----ALTGT 366
L++A+ M++L +K +HRDL N LD+ V++ADFG AR + D E TG
Sbjct: 138 LQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 195
Query: 367 FV---YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ +MA E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L
Sbjct: 196 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 255
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + L E++ W A +RPSFS + + I
Sbjct: 256 QPEYCPD-----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 139/330 (42%), Gaps = 51/330 (15%)
Query: 160 QTPLHRYCSQTPLLQQSDLAVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWRGL 219
+ PL +C + P + W + L + +G+G + A G+
Sbjct: 5 ELPLDEHCERLPY-------------DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGI 51
Query: 220 D-------VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF-VLQLMGACLEPPYRGW 271
D VAVK + H+ A+ E+ L H V+ L+GAC +P
Sbjct: 52 DKTATCRTVAVKMLKEGATHSEHRALM---SELKILIHIGHHLNVVNLLGACTKPGGPLM 108
Query: 272 LVTELLG-TTLKEWLHGLGSQRRKERMVP------LPPFEERLARALEIAQAMQYLHEQK 324
++ E L +L ++ ++ P E + + ++A+ M++L +K
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 168
Query: 325 PKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDGEMALTGT----FVYMAPEVIQCEP 379
IHRDL NI L + V+I DFG AR D + G +MAPE I
Sbjct: 169 --CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 380 YSEKSDVYSFGIILNEIIT-GNHPY----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLR 434
Y+ +SDV+SFG++L EI + G PY I++++ + EG A D
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-----CRRLKEGTRMRA---PDYTTP 278
Query: 435 ELIELICLSWDGDASVRPSFSSITCSLKNI 464
E+ + + W G+ S RP+FS + L N+
Sbjct: 279 EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 197 IDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
+ E IG+G +Y + + AVK + T+ V+ F E +
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDF 88
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARA 310
H VL L+G CL +V + HG L + R E P ++ +
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMK-------HGDLRNFIRNETHNP--TVKDLIGFG 139
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM----ALTGT 366
L++A+ M++L +K +HRDL N LD+ V++ADFG AR + D E TG
Sbjct: 140 LQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 197
Query: 367 FV---YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ +MA E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L
Sbjct: 198 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 257
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + L E++ W A +RPSFS + + I
Sbjct: 258 QPEYCPD-----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 38/257 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ E + F +E++ L +H +++ G C R L+ E L +L+++L
Sbjct: 67 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---- 122
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
Q+ KER+ + + L +I + M+YL ++ IHRDL NI +++ V+I D
Sbjct: 123 -QKHKERIDHI----KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGD 175
Query: 350 FGHARFL-SDGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG + L D E + APE + +S SDV+SFG++L E+ T Y
Sbjct: 176 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----Y 231
Query: 404 IEKDYK-PAKIAMEVGEGKL--------------RPALPEEDGQLRELIELICLSWDGDA 448
IEK PA+ +G K LP DG E+ ++ W+ +
Sbjct: 232 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 291
Query: 449 SVRPSFSSITCSLKNIQ 465
+ RPSF + + I+
Sbjct: 292 NQRPSFRDLALRVDQIR 308
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 197 IDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
+ E IG+G +Y + + AVK + T+ V+ F E +
Sbjct: 33 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDF 89
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARA 310
H VL L+G CL +V + HG L + R E P ++ +
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMK-------HGDLRNFIRNETHNP--TVKDLIGFG 140
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM----ALTGT 366
L++A+ M++L +K +HRDL N LD+ V++ADFG AR + D E TG
Sbjct: 141 LQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 198
Query: 367 FV---YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ +MA E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 258
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + L E++ W A +RPSFS + + I
Sbjct: 259 QPEYCPD-----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 197 IDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
+ E IG+G +Y + + AVK + T+ V+ F E +
Sbjct: 37 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDF 93
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARA 310
H VL L+G CL +V + HG L + R E P ++ +
Sbjct: 94 SHPNVLSLLGICLRSEGSPLVVLPYMK-------HGDLRNFIRNETHNP--TVKDLIGFG 144
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM----ALTGT 366
L++A+ M++L +K +HRDL N LD+ V++ADFG AR + D E TG
Sbjct: 145 LQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 202
Query: 367 FV---YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ +MA E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L
Sbjct: 203 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 262
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + L E++ W A +RPSFS + + I
Sbjct: 263 QPEYCPD-----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 299
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 110/225 (48%), Gaps = 30/225 (13%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG--LDVAVKCIYPDFFHTNENAVTF-FAQEVDTLSRQ 251
++ ++ +G+G N+Y A + +A+K ++ + V +EV+ S
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHL 65
Query: 252 RHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFEE-RLA 308
RH +L+L G R +L+ E LGT +E + L F+E R A
Sbjct: 66 RHPNILRLYG-YFHDSTRVYLILEYAPLGTVYRE-------------LQKLSKFDEQRTA 111
Query: 309 RAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALT 364
+ E+A A+ Y H +K VIHRD+KP N+ L A ++IADFG HA S AL
Sbjct: 112 TYITELANALSYCHSKK--VIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRAALC 167
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 139/330 (42%), Gaps = 51/330 (15%)
Query: 160 QTPLHRYCSQTPLLQQSDLAVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWRGL 219
+ PL +C + P + W + L + +G+G + A G+
Sbjct: 5 ELPLDEHCERLPY-------------DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGI 51
Query: 220 D-------VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF-VLQLMGACLEPPYRGW 271
D VAVK + H+ A+ E+ L H V+ L+GAC +P
Sbjct: 52 DKTATCRTVAVKMLKEGATHSEHRALM---SELKILIHIGHHLNVVNLLGACTKPGGPLM 108
Query: 272 LVTELLG-TTLKEWLHGLGSQRRKERMVP------LPPFEERLARALEIAQAMQYLHEQK 324
++ E L +L ++ ++ P E + + ++A+ M++L +K
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 168
Query: 325 PKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDGEMALTGT----FVYMAPEVIQCEP 379
IHRDL NI L + V+I DFG AR D + G +MAPE I
Sbjct: 169 --CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRV 226
Query: 380 YSEKSDVYSFGIILNEIIT-GNHPY----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLR 434
Y+ +SDV+SFG++L EI + G PY I++++ + EG A D
Sbjct: 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-----CRRLKEGTRMRA---PDYTTP 278
Query: 435 ELIELICLSWDGDASVRPSFSSITCSLKNI 464
E+ + + W G+ S RP+FS + L N+
Sbjct: 279 EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 197 IDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
+ E IG+G +Y + + AVK + T+ V+ F E +
Sbjct: 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDF 147
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARA 310
H VL L+G CL +V L HG L + R E P ++ +
Sbjct: 148 SHPNVLSLLGICLRSEGSPLVV-------LPYMKHGDLRNFIRNETHNP--TVKDLIGFG 198
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM----ALTGT 366
L++A+ M++L +K +HRDL N LD+ V++ADFG AR + D E TG
Sbjct: 199 LQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 256
Query: 367 FV---YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ +MA E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L
Sbjct: 257 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 316
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + L E++ W A +RPSFS + + I
Sbjct: 317 QPEYCPD-----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 353
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 38/257 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ E + F +E++ L +H +++ G C R L+ E L +L+++L
Sbjct: 49 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---- 104
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
Q+ KER+ + + L +I + M+YL ++ IHRDL NI +++ V+I D
Sbjct: 105 -QKHKERIDHI----KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGD 157
Query: 350 FGHARFL-SDGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG + L D E + APE + +S SDV+SFG++L E+ T Y
Sbjct: 158 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----Y 213
Query: 404 IEKDYK-PAKIAMEVGEGKL--------------RPALPEEDGQLRELIELICLSWDGDA 448
IEK PA+ +G K LP DG E+ ++ W+ +
Sbjct: 214 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 273
Query: 449 SVRPSFSSITCSLKNIQ 465
+ RPSF + + I+
Sbjct: 274 NQRPSFRDLALRVDQIR 290
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 38/257 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ E + F +E++ L +H +++ G C R L+ E L +L+++L
Sbjct: 67 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---- 122
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
Q+ KER+ + + L +I + M+YL ++ IHRDL NI +++ V+I D
Sbjct: 123 -QKHKERIDHI----KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGD 175
Query: 350 FGHARFL-SDGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG + L D E + APE + +S SDV+SFG++L E+ T Y
Sbjct: 176 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----Y 231
Query: 404 IEKDYK-PAKIAMEVGEGKL--------------RPALPEEDGQLRELIELICLSWDGDA 448
IEK PA+ +G K LP DG E+ ++ W+ +
Sbjct: 232 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 291
Query: 449 SVRPSFSSITCSLKNIQ 465
+ RPSF + + I+
Sbjct: 292 NQRPSFRDLALRVDQIR 308
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 131/300 (43%), Gaps = 38/300 (12%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-------VAVKCIYPDFFHTNENAVTFFA 242
W + L + +G+G + A G+D VAVK + H+ A+
Sbjct: 13 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALM--- 69
Query: 243 QEVDTLSRQRHRF-VLQLMGACLEPPYRGWLVTELLG-TTLKEWLHGLGSQRRKERMVP- 299
E+ L H V+ L+GAC +P ++ E L +L ++ ++ P
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 300 -----LPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR 354
E + + ++A+ M++L +K IHRDL NI L + V+I DFG AR
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 355 -FLSDGEMALTGT----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY----I 404
D + G +MAPE I Y+ +SDV+SFG++L EI + G PY I
Sbjct: 188 DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 247
Query: 405 EKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++++ + EG A D E+ + + W G+ S RP+FS + L N+
Sbjct: 248 DEEF-----CRRLKEGTRMRA---PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 33/282 (11%)
Query: 197 IDLQEKIGQGTTANIYRAIW-----RGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
+ E IG+G +Y + + AVK + T+ V+ F E +
Sbjct: 33 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI---TDIGEVSQFLTEGIIMKDF 89
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG-LGSQRRKERMVPLPPFEERLARA 310
H VL L+G CL +V + HG L + R E P ++ +
Sbjct: 90 SHPNVLSLLGICLRSEGSPLVVLPYMK-------HGDLRNFIRNETHNP--TVKDLIGFG 140
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM----ALTGT 366
L++A+ M++L +K +HRDL N LD+ V++ADFG AR + D E TG
Sbjct: 141 LQVAKGMKFLASKK--FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGA 198
Query: 367 FV---YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKL 422
+ +MA E +Q + ++ KSDV+SFG++L E++T G PY + + + + G L
Sbjct: 199 KLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 258
Query: 423 RPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+P + L E++ W A +RPSFS + + I
Sbjct: 259 QPEYCPD-----PLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 38/257 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ E + F +E++ L +H +++ G C R L+ E L +L+++L
Sbjct: 80 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---- 135
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
Q+ KER+ + + L +I + M+YL ++ IHRDL NI +++ V+I D
Sbjct: 136 -QKHKERIDHI----KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGD 188
Query: 350 FGHARFL-SDGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG + L D E + APE + +S SDV+SFG++L E+ T Y
Sbjct: 189 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----Y 244
Query: 404 IEKDYK-PAKIAMEVGEGKL--------------RPALPEEDGQLRELIELICLSWDGDA 448
IEK PA+ +G K LP DG E+ ++ W+ +
Sbjct: 245 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 304
Query: 449 SVRPSFSSITCSLKNIQ 465
+ RPSF + + I+
Sbjct: 305 NQRPSFRDLALRVDQIR 321
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 38/257 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ E + F +E++ L +H +++ G C R L+ E L +L+++L
Sbjct: 49 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---- 104
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
Q+ KER+ + + L +I + M+YL ++ IHRDL NI +++ V+I D
Sbjct: 105 -QKHKERIDHI----KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGD 157
Query: 350 FGHARFL-SDGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG + L D E + APE + +S SDV+SFG++L E+ T Y
Sbjct: 158 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----Y 213
Query: 404 IEKDYK-PAKIAMEVGEGKL--------------RPALPEEDGQLRELIELICLSWDGDA 448
IEK PA+ +G K LP DG E+ ++ W+ +
Sbjct: 214 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 273
Query: 449 SVRPSFSSITCSLKNIQ 465
+ RPSF + + I+
Sbjct: 274 NQRPSFRDLALRVDQIR 290
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 127/290 (43%), Gaps = 31/290 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGL-------DVAVKCIYPDFFHTNENAVTF-- 240
W + ++I + ++GQG+ +Y + +G+ VA+K + NE A
Sbjct: 10 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRER 62
Query: 241 --FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMV 298
F E + V++L+G + ++ + LK +L L ++
Sbjct: 63 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 299 PLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P + + A EIA M YL+ K +HRDL N + + V+I DFG R + +
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 359 GEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAK 412
+ G +M+PE ++ ++ SDV+SFG++L EI T PY + +
Sbjct: 181 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--QGLSNEQ 238
Query: 413 IAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
+ V EG L L + D L EL+ + W + +RPSF I S+K
Sbjct: 239 VLRFVMEGGL---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 285
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 130/287 (45%), Gaps = 33/287 (11%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
ID K+++ K+ + + +++ W+G D+ VK + + T ++ F +E L
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRD--FNEECPRLRIF 64
Query: 252 RHRFVLQLMGACLEPP------YRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEE 305
H VL ++GAC PP W+ L L E + + Q + +
Sbjct: 65 SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKF-------- 116
Query: 306 RLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRI--ADFGHARFLSDGEMAL 363
AL++A+ M +LH +P + L ++ +D+ RI AD + F S G M
Sbjct: 117 ----ALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFS-FQSPGRMYA 171
Query: 364 TGTFVYMAPEVIQCEPYS---EKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
++APE +Q +P +D++SF ++L E++T P+ D +I M+V
Sbjct: 172 PA---WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF--ADLSNMEIGMKVALE 226
Query: 421 KLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMK 467
LRP +P G + +L+ + + D + RP F I L+ +Q K
Sbjct: 227 GLRPTIPP--GISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQDK 271
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 38/257 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ E + F +E++ L +H +++ G C R L+ E L +L+++L
Sbjct: 48 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---- 103
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
Q+ KER+ + + L +I + M+YL ++ IHRDL NI +++ V+I D
Sbjct: 104 -QKHKERIDHI----KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGD 156
Query: 350 FGHARFL-SDGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG + L D E + APE + +S SDV+SFG++L E+ T Y
Sbjct: 157 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----Y 212
Query: 404 IEKDYK-PAKIAMEVGEGKL--------------RPALPEEDGQLRELIELICLSWDGDA 448
IEK PA+ +G K LP DG E+ ++ W+ +
Sbjct: 213 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 272
Query: 449 SVRPSFSSITCSLKNIQ 465
+ RPSF + + I+
Sbjct: 273 NQRPSFRDLALRVDQIR 289
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 38/257 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ E + F +E++ L +H +++ G C R L+ E L +L+++L
Sbjct: 52 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---- 107
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
Q+ KER+ + + L +I + M+YL ++ IHRDL NI +++ V+I D
Sbjct: 108 -QKHKERIDHI----KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGD 160
Query: 350 FGHARFL-SDGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG + L D E + APE + +S SDV+SFG++L E+ T Y
Sbjct: 161 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----Y 216
Query: 404 IEKDYK-PAKIAMEVGEGKL--------------RPALPEEDGQLRELIELICLSWDGDA 448
IEK PA+ +G K LP DG E+ ++ W+ +
Sbjct: 217 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 276
Query: 449 SVRPSFSSITCSLKNIQ 465
+ RPSF + + I+
Sbjct: 277 NQRPSFRDLALRVDQIR 293
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 38/257 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ E + F +E++ L +H +++ G C R L+ E L +L+++L
Sbjct: 56 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---- 111
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
Q+ KER+ + + L +I + M+YL ++ IHRDL NI +++ V+I D
Sbjct: 112 -QKHKERIDHI----KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGD 164
Query: 350 FGHARFL-SDGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG + L D E + APE + +S SDV+SFG++L E+ T Y
Sbjct: 165 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----Y 220
Query: 404 IEKDYK-PAKIAMEVGEGKL--------------RPALPEEDGQLRELIELICLSWDGDA 448
IEK PA+ +G K LP DG E+ ++ W+ +
Sbjct: 221 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 280
Query: 449 SVRPSFSSITCSLKNIQ 465
+ RPSF + + I+
Sbjct: 281 NQRPSFRDLALRVDQIR 297
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 38/257 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ E + F +E++ L +H +++ G C R L+ E L +L+++L
Sbjct: 55 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---- 110
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
Q+ KER+ + + L +I + M+YL ++ IHRDL NI +++ V+I D
Sbjct: 111 -QKHKERIDHI----KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGD 163
Query: 350 FGHARFL-SDGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG + L D E + APE + +S SDV+SFG++L E+ T Y
Sbjct: 164 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----Y 219
Query: 404 IEKDYK-PAKIAMEVGEGKL--------------RPALPEEDGQLRELIELICLSWDGDA 448
IEK PA+ +G K LP DG E+ ++ W+ +
Sbjct: 220 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 279
Query: 449 SVRPSFSSITCSLKNIQ 465
+ RPSF + + I+
Sbjct: 280 NQRPSFRDLALRVDQIR 296
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 38/257 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ E + F +E++ L +H +++ G C R L+ E L +L+++L
Sbjct: 47 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---- 102
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
Q+ KER+ + + L +I + M+YL ++ IHRDL NI +++ V+I D
Sbjct: 103 -QKHKERIDHI----KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGD 155
Query: 350 FGHARFL-SDGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG + L D E + APE + +S SDV+SFG++L E+ T Y
Sbjct: 156 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----Y 211
Query: 404 IEKDYK-PAKIAMEVGEGKL--------------RPALPEEDGQLRELIELICLSWDGDA 448
IEK PA+ +G K LP DG E+ ++ W+ +
Sbjct: 212 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 271
Query: 449 SVRPSFSSITCSLKNIQ 465
+ RPSF + + I+
Sbjct: 272 NQRPSFRDLALRVDQIR 288
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 109/225 (48%), Gaps = 30/225 (13%)
Query: 195 KEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF-FAQEVDTLSRQ 251
++ ++ +G+G N+Y R +A+K ++ + V +EV+ S
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHL 68
Query: 252 RHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFEE-RLA 308
RH +L+L G R +L+ E LGT +E + L F+E R A
Sbjct: 69 RHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQKLSKFDEQRTA 114
Query: 309 RAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALT 364
+ E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA S AL
Sbjct: 115 TYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRAALC 170
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 38/257 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ E + F +E++ L +H +++ G C R L+ E L +L+++L
Sbjct: 54 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---- 109
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
Q+ KER+ + + L +I + M+YL ++ IHRDL NI +++ V+I D
Sbjct: 110 -QKHKERIDHI----KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGD 162
Query: 350 FGHARFL-SDGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG + L D E + APE + +S SDV+SFG++L E+ T Y
Sbjct: 163 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----Y 218
Query: 404 IEKDYK-PAKIAMEVGEGKL--------------RPALPEEDGQLRELIELICLSWDGDA 448
IEK PA+ +G K LP DG E+ ++ W+ +
Sbjct: 219 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 278
Query: 449 SVRPSFSSITCSLKNIQ 465
+ RPSF + + I+
Sbjct: 279 NQRPSFRDLALRVDQIR 295
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 109/225 (48%), Gaps = 30/225 (13%)
Query: 195 KEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF-FAQEVDTLSRQ 251
++ ++ +G+G N+Y R R +A+K ++ + V +EV+ S
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHL 62
Query: 252 RHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFEE-RLA 308
RH +L+L G R +L+ E LGT +E + L F+E R A
Sbjct: 63 RHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQKLSKFDEQRTA 108
Query: 309 RAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALT 364
+ E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA S L
Sbjct: 109 TYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRTTLC 164
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 165 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 209
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 127/290 (43%), Gaps = 31/290 (10%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGL-------DVAVKCIYPDFFHTNENAVTF-- 240
W + ++I + ++GQG+ +Y + +G+ VA+K + NE A
Sbjct: 20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV-------NEAASMRER 72
Query: 241 --FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMV 298
F E + V++L+G + ++ + LK +L L ++
Sbjct: 73 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 299 PLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P + + A EIA M YL+ K +HRDL N + + V+I DFG R + +
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 359 GEMALTG-----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAK 412
+ G +M+PE ++ ++ SDV+SFG++L EI T PY + +
Sbjct: 191 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPY--QGLSNEQ 248
Query: 413 IAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
+ V EG L L + D L EL+ + W + +RPSF I S+K
Sbjct: 249 VLRFVMEGGL---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 116/257 (45%), Gaps = 38/257 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ E + F +E++ L +H +++ G C R L+ E L +L+++L
Sbjct: 53 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---- 108
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
Q+ KER+ + + L +I + M+YL ++ IHRDL NI +++ V+I D
Sbjct: 109 -QKHKERIDHI----KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGD 161
Query: 350 FGHARFL-SDGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG + L D E + APE + +S SDV+SFG++L E+ T Y
Sbjct: 162 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----Y 217
Query: 404 IEKDYK-PAKIAMEVGEGKL--------------RPALPEEDGQLRELIELICLSWDGDA 448
IEK PA+ +G K LP DG E+ ++ W+ +
Sbjct: 218 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 277
Query: 449 SVRPSFSSITCSLKNIQ 465
+ RPSF + + I+
Sbjct: 278 NQRPSFRDLALRVDQIR 294
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 21/177 (11%)
Query: 234 NENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR 293
EN V + +E D +SR H F ++L + + ++ L +++ +GS
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS--- 128
Query: 294 KERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG 351
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DFG
Sbjct: 129 ---------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFG 177
Query: 352 HARFLS-DGEMALTGTFV----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ LS + + A +FV Y++PE++ + S+ SD+++ G I+ +++ G P+
Sbjct: 178 TAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 32/235 (13%)
Query: 185 AKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF-F 241
K W ++ EI +G+G N+Y R +A+K ++ + V
Sbjct: 1 GKKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQL 56
Query: 242 AQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVP 299
+EV+ S RH +L+L G R +L+ E LGT +E +
Sbjct: 57 RREVEIQSHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQK 102
Query: 300 LPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HAR 354
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA
Sbjct: 103 LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSCHAP 160
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L+GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 161 --SSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 112/236 (47%), Gaps = 32/236 (13%)
Query: 184 QAKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF- 240
++K W ++ EI +G+G N+Y R +A+K ++ + V
Sbjct: 4 ESKKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQ 59
Query: 241 FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMV 298
+EV+ S RH +L+L G R +L+ E LGT +E +
Sbjct: 60 LRREVEIQSHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQ 105
Query: 299 PLPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HA 353
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA
Sbjct: 106 KLSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 354 RFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 164 P--SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 112/236 (47%), Gaps = 32/236 (13%)
Query: 184 QAKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF- 240
++K W ++ EI +G+G N+Y R +A+K ++ + V
Sbjct: 2 ESKKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQ 57
Query: 241 FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMV 298
+EV+ S RH +L+L G R +L+ E LGT +E +
Sbjct: 58 LRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRE-------------LQ 103
Query: 299 PLPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HA 353
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA
Sbjct: 104 KLSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 354 RFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 162 P--SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 112/236 (47%), Gaps = 32/236 (13%)
Query: 184 QAKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF- 240
++K W ++ EI +G+G N+Y R +A+K ++ + V
Sbjct: 16 ESKKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQ 71
Query: 241 FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMV 298
+EV+ S RH +L+L G R +L+ E LGT +E +
Sbjct: 72 LRREVEIQSHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQ 117
Query: 299 PLPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HA 353
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA
Sbjct: 118 KLSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHA 175
Query: 354 RFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 176 P--SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 229
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 112/236 (47%), Gaps = 32/236 (13%)
Query: 184 QAKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF- 240
++K W ++ EI +G+G N+Y R +A+K ++ + V
Sbjct: 1 ESKKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQ 56
Query: 241 FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMV 298
+EV+ S RH +L+L G R +L+ E LGT +E +
Sbjct: 57 LRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRE-------------LQ 102
Query: 299 PLPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HA 353
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA
Sbjct: 103 KLSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHA 160
Query: 354 RFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 161 P--SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 214
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 32/236 (13%)
Query: 184 QAKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF- 240
++K W ++ + ++ +G+G N+Y R +A+K ++ + V
Sbjct: 25 ESKKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQ 80
Query: 241 FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMV 298
+EV+ S RH +L+L G R +L+ E LGT +E +
Sbjct: 81 LRREVEIQSHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQ 126
Query: 299 PLPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HA 353
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA
Sbjct: 127 KLSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHA 184
Query: 354 RFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 185 P--SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 238
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 140/332 (42%), Gaps = 55/332 (16%)
Query: 160 QTPLHRYCSQTPLLQQSDLAVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWRGL 219
+ PL +C + P + W + L + +G+G + A G+
Sbjct: 7 ELPLDEHCERLPY-------------DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGI 53
Query: 220 D-------VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF-VLQLMGACLEPPYRGW 271
D VAVK + H+ A+ E+ L H V+ L+GAC +P
Sbjct: 54 DKTATCRTVAVKMLKEGATHSEHRALM---SELKILIHIGHHLNVVNLLGACTKPGGPLM 110
Query: 272 LVTELLG-TTLKEWLHGLGSQRRKERMVP------LPPFEERLARALEIAQAMQYLHEQK 324
++ E L +L ++ + P E + + ++A+ M++L +K
Sbjct: 111 VIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 170
Query: 325 PKVIHRDLKPSNIFLDDAKHVRIADFGHAR-------FLSDGEMALTGTFVYMAPEVIQC 377
IHRDL NI L + V+I DFG AR ++ G+ L +MAPE I
Sbjct: 171 --CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PLKWMAPETIFD 226
Query: 378 EPYSEKSDVYSFGIILNEIIT-GNHPY----IEKDYKPAKIAMEVGEGKLRPALPEEDGQ 432
Y+ +SDV+SFG++L EI + G PY I++++ + EG A D
Sbjct: 227 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-----CRRLKEGTRMRA---PDYT 278
Query: 433 LRELIELICLSWDGDASVRPSFSSITCSLKNI 464
E+ + + W G+ S RP+FS + L N+
Sbjct: 279 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 310
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 18/123 (14%)
Query: 280 TLKEWLHGLGSQRRKERM---VPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSN 336
TL++W+ +RR E++ + L FE+ I + + Y+H +K +I+RDLKPSN
Sbjct: 106 TLEQWIE----KRRGEKLDKVLALELFEQ-------ITKGVDYIHSKK--LINRDLKPSN 152
Query: 337 IFLDDAKHVRIADFGHARFL-SDGEMALT-GTFVYMAPEVIQCEPYSEKSDVYSFGIILN 394
IFL D K V+I DFG L +DG+ + GT YM+PE I + Y ++ D+Y+ G+IL
Sbjct: 153 IFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILA 212
Query: 395 EII 397
E++
Sbjct: 213 ELL 215
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 109/225 (48%), Gaps = 30/225 (13%)
Query: 195 KEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF-FAQEVDTLSRQ 251
++ ++ +G+G N+Y R +A+K ++ + V +EV+ S
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHL 65
Query: 252 RHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFEE-RLA 308
RH +L+L G R +L+ E LGT +E + L F+E R A
Sbjct: 66 RHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQKLSKFDEQRTA 111
Query: 309 RAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALT 364
+ E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA S AL
Sbjct: 112 TYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRAALC 167
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 32/236 (13%)
Query: 184 QAKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF- 240
++K W ++ EI +G+G N+Y R +A+K ++ + V
Sbjct: 4 ESKKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQ 59
Query: 241 FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMV 298
+EV+ S RH +L+L G R +L+ E LGT +E +
Sbjct: 60 LRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRE-------------LQ 105
Query: 299 PLPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HA 353
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA
Sbjct: 106 KLSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 354 RFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE I+ + EK D++S G++ E + G P+ Y+
Sbjct: 164 P--SSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 24/219 (10%)
Query: 194 PKEIDLQEKIGQGT--TANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
P++ + +G+G+ T + R + + A+K + EN V + +E D +SR
Sbjct: 9 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRL 67
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLAR-- 309
H F ++L + + ++ L +++ +GS F+E R
Sbjct: 68 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS------------FDETCTRFY 115
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMALTGTFV 368
EI A++YLH + +IHRDLKP NI L++ H++I DFG A+ LS + + A FV
Sbjct: 116 TAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 173
Query: 369 ----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 174 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 24/219 (10%)
Query: 194 PKEIDLQEKIGQGT--TANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
P++ + +G+G+ T + R + + A+K + EN V + +E D +SR
Sbjct: 8 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRL 66
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLAR-- 309
H F ++L + + ++ L +++ +GS F+E R
Sbjct: 67 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS------------FDETCTRFY 114
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMALTGTFV 368
EI A++YLH + +IHRDLKP NI L++ H++I DFG A+ LS + + A FV
Sbjct: 115 TAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 172
Query: 369 ----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 173 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 112/236 (47%), Gaps = 32/236 (13%)
Query: 184 QAKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF- 240
++K W ++ EI +G+G N+Y R +A+K ++ + V
Sbjct: 2 ESKKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQ 57
Query: 241 FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMV 298
+EV+ S RH +L+L G R +L+ E LGT +E +
Sbjct: 58 LRREVEIQSHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQ 103
Query: 299 PLPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HA 353
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA
Sbjct: 104 KLSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 354 RFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 162 P--SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 112/236 (47%), Gaps = 32/236 (13%)
Query: 184 QAKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF- 240
++K W ++ EI +G+G N+Y R +A+K ++ + V
Sbjct: 2 ESKKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQ 57
Query: 241 FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMV 298
+EV+ S RH +L+L G R +L+ E LGT +E +
Sbjct: 58 LRREVEIQSHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQ 103
Query: 299 PLPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HA 353
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA
Sbjct: 104 KLSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 354 RFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 162 P--SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 24/219 (10%)
Query: 194 PKEIDLQEKIGQGT--TANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
P++ + +G+G+ T + R + + A+K + EN V + +E D +SR
Sbjct: 6 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRL 64
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLAR-- 309
H F ++L + + ++ L +++ +GS F+E R
Sbjct: 65 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS------------FDETCTRFY 112
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMALTGTFV 368
EI A++YLH + +IHRDLKP NI L++ H++I DFG A+ LS + + A FV
Sbjct: 113 TAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 170
Query: 369 ----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 171 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 24/219 (10%)
Query: 194 PKEIDLQEKIGQGT--TANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
P++ + +G+G+ T + R + + A+K + EN V + +E D +SR
Sbjct: 7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRL 65
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLAR-- 309
H F ++L + + ++ L +++ +GS F+E R
Sbjct: 66 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS------------FDETCTRFY 113
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMALTGTFV 368
EI A++YLH + +IHRDLKP NI L++ H++I DFG A+ LS + + A FV
Sbjct: 114 TAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 171
Query: 369 ----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 172 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 202 KIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMG 261
K G+G +Y+ VAVK + T E F QE+ ++ +H +++L+G
Sbjct: 29 KXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG 88
Query: 262 ACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLH 321
+ + +L + L L P + R A A + +LH
Sbjct: 89 FSSDGDDLCLVYVYXPNGSLLDRLSCLDG-------TPPLSWHXRCKIAQGAANGINFLH 141
Query: 322 EQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR----FLSDGEMA-LTGTFVYMAPEVIQ 376
E IHRD+K +NI LD+A +I+DFG AR F + + GT Y APE ++
Sbjct: 142 ENHH--IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR 199
Query: 377 CEPYSEKSDVYSFGIILNEIITG 399
E + KSD+YSFG++L EIITG
Sbjct: 200 GE-ITPKSDIYSFGVVLLEIITG 221
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 199 LQEKIGQGTTANI--YRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFV 256
LQ+ IG+G A + R + G +VAVK I D N ++ +EV + H +
Sbjct: 19 LQKTIGKGNFAKVKLARHVLTGREVAVKII--DKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 257 LQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
++L +E +LV E G + ++L G + KE A+ +I
Sbjct: 77 VKLF-EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR----------AKFRQIVS 125
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALTGTFVYMAPE 373
A+QY H++ ++HRDLK N+ LD +++IADFG + + G G+ Y APE
Sbjct: 126 AVQYCHQKY--IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPE 183
Query: 374 VIQCEPYS-EKSDVYSFGIILNEIITGNHPY 403
+ Q + Y + DV+S G+IL +++G+ P+
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 39/225 (17%)
Query: 198 DLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF 255
+L E +G G + ++ R + DVAVK + D + + F +E + H
Sbjct: 15 ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAALNHPA 73
Query: 256 VLQL--MGACLEP----PYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLA 308
++ + G P PY +V E + G TL++ +H G P+ P
Sbjct: 74 IVAVYDTGEAETPAGPLPY---IVMEYVDGVTLRDIVHTEG---------PMTP-----K 116
Query: 309 RALEI----AQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG----- 359
RA+E+ QA+ + H+ +IHRD+KP+NI + V++ DFG AR ++D
Sbjct: 117 RAIEVIADACQALNFSHQNG--IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVX 174
Query: 360 -EMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ GT Y++PE + + +SDVYS G +L E++TG P+
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 32/235 (13%)
Query: 185 AKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF-F 241
+K W ++ EI +G+G N+Y R +A+K ++ + V
Sbjct: 5 SKKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQL 60
Query: 242 AQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVP 299
+EV+ S RH +L+L G R +L+ E LGT +E +
Sbjct: 61 RREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRE-------------LQK 106
Query: 300 LPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HAR 354
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA
Sbjct: 107 LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP 164
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 165 --SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 30/225 (13%)
Query: 195 KEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF-FAQEVDTLSRQ 251
++ ++ +G+G N+Y R +A+K ++ + V +EV+ S
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHL 65
Query: 252 RHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFEE-RLA 308
RH +L+L G R +L+ E LGT +E + L F+E R A
Sbjct: 66 RHPNILRLYGY-FHDATRVYLILEYAPLGTVYRE-------------LQKLSKFDEQRTA 111
Query: 309 RAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALT 364
+ E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA S L
Sbjct: 112 TYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRTTLC 167
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 38/257 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ E + F +E++ L +H +++ G C R L+ E L +L+++L
Sbjct: 50 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---- 105
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
Q+ KER+ + + L +I + M+YL ++ IHR+L NI +++ V+I D
Sbjct: 106 -QKHKERIDHI----KLLQYTSQICKGMEYLGTKR--YIHRNLATRNILVENENRVKIGD 158
Query: 350 FGHARFL-SDGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG + L D E + APE + +S SDV+SFG++L E+ T Y
Sbjct: 159 FGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----Y 214
Query: 404 IEKDYK-PAKIAMEVGEGKL--------------RPALPEEDGQLRELIELICLSWDGDA 448
IEK PA+ +G K LP DG E+ ++ W+ +
Sbjct: 215 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 274
Query: 449 SVRPSFSSITCSLKNIQ 465
+ RPSF + + I+
Sbjct: 275 NQRPSFRDLALRVDQIR 291
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 39/295 (13%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIY----RAIWRG---LDVAVKCIYPDFFHTNENAV---- 238
W + ++I L ++GQG+ +Y R I +G VAVK + NE+A
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRER 64
Query: 239 TFFAQEVDTLSRQRHRFVLQLMGACL--EPPYRGWLVTELLG-TTLKEWLHGLGSQRRKE 295
F E + V++L+G +P +V EL+ LK +L L +
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL---VVMELMAHGDLKSYLRSLRPEAENN 121
Query: 296 RMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
P P +E + A EIA M YL+ +K +HRDL N + V+I DFG R
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 356 LSDGEMALTG-----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIE-KDY 408
+ + + G +MAPE ++ ++ SD++SFG++L EI + PY +
Sbjct: 180 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
+ K M+ G L + D + +L+ + W + ++RP+F I LK+
Sbjct: 240 QVLKFVMDGG------YLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 32/236 (13%)
Query: 184 QAKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF- 240
++K W ++ EI +G+G N+Y R +A+K ++ + V
Sbjct: 1 ESKKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQ 56
Query: 241 FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMV 298
+EV+ S RH +L+L G R +L+ E LGT +E +
Sbjct: 57 LRREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRE-------------LQ 102
Query: 299 PLPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HA 353
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IA+FG HA
Sbjct: 103 KLSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIANFGWSVHA 160
Query: 354 RFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 161 P--SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 214
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 89/177 (50%), Gaps = 21/177 (11%)
Query: 234 NENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR 293
EN V + +E D +SR H F ++L + + ++ L +++ +GS
Sbjct: 70 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--- 126
Query: 294 KERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG 351
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DFG
Sbjct: 127 ---------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFG 175
Query: 352 HARFLSDGEM-----ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ LS A GT Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 176 TAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 32/235 (13%)
Query: 185 AKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF-F 241
+K W ++ EI +G+G N+Y R +A+K ++ + V
Sbjct: 1 SKKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQL 56
Query: 242 AQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVP 299
+EV+ S RH +L+L G R +L+ E LGT +E +
Sbjct: 57 RREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRE-------------LQK 102
Query: 300 LPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HAR 354
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA
Sbjct: 103 LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP 160
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 161 --SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 30/290 (10%)
Query: 185 AKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWR-----GLDVAVKCIYPDFFHTNENAVT 239
A + I + I+L IG+G ++++ I+ L VA+K T+++
Sbjct: 2 ASTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVRE 58
Query: 240 FFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVP 299
F QE T+ + H +++L+G E P W++ EL TL E L ++ +
Sbjct: 59 KFLQEALTMRQFDHPHIVKLIGVITENPV--WIIMEL--CTLGELRSFLQVRKYSLDLAS 114
Query: 300 LPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG 359
L + A +++ A+ YL ++ +HRD+ N+ + V++ DFG +R++ D
Sbjct: 115 L------ILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 166
Query: 360 EM--ALTGTF--VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIA 414
A G +MAPE I ++ SDV+ FG+ + EI+ G P+ + K +
Sbjct: 167 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVI 224
Query: 415 MEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ G+ P P L L+ W D S RP F+ + L I
Sbjct: 225 GRIENGERLPMPPNCPPT---LYSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 30/283 (10%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWR-----GLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
I + I+L IG+G ++++ I+ L VA+K T+++ F QE
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEAL 63
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER 306
T+ + H +++L+G E P W++ EL TL E L ++ + L
Sbjct: 64 TMRQFDHPHIVKLIGVITENPV--WIIMEL--CTLGELRSFLQVRKYSLDLASL------ 113
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALT 364
+ A +++ A+ YL ++ +HRD+ N+ + V++ DFG +R++ D A
Sbjct: 114 ILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 365 GTF--VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGK 421
G +MAPE I ++ SDV+ FG+ + EI+ G P+ + K + + G+
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGE 229
Query: 422 LRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P P L L+ W D S RP F+ + L I
Sbjct: 230 RLPMPPNCPPT---LYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 116/252 (46%), Gaps = 20/252 (7%)
Query: 203 IGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGA 262
+G+GT +Y R L V+ + + +E+ +H+ ++Q +G+
Sbjct: 30 LGKGTYGIVYAG--RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 263 CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLA-RALEIAQAMQYLH 321
E + + ++ G +L L + + PL E+ + +I + ++YLH
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALL--------RSKWGPLKDNEQTIGFYTKQILEGLKYLH 139
Query: 322 EQKPKVIHRDLKPSNIFLDDAKHV-RIADFGHARFLSD---GEMALTGTFVYMAPEVIQC 377
+ + ++HRD+K N+ ++ V +I+DFG ++ L+ TGT YMAPE+I
Sbjct: 140 DNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDK 197
Query: 378 EP--YSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALPEEDGQLRE 435
P Y + +D++S G + E+ TG P+ E +P +VG K+ P +PE +
Sbjct: 198 GPRGYGKAADIWSLGCTIIEMATGKPPFYELG-EPQAAMFKVGMFKVHPEIPESMSAEAK 256
Query: 436 LIELICLSWDGD 447
L C D D
Sbjct: 257 AFILKCFEPDPD 268
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 39/225 (17%)
Query: 198 DLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF 255
+L E +G G + ++ R + DVAVK + D + + F +E + H
Sbjct: 15 ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAALNHPA 73
Query: 256 VLQL--MGACLEP----PYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLA 308
++ + G P PY +V E + G TL++ +H G P+ P
Sbjct: 74 IVAVYDTGEAETPAGPLPY---IVMEYVDGVTLRDIVHTEG---------PMTP-----K 116
Query: 309 RALEI----AQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG----- 359
RA+E+ QA+ + H+ +IHRD+KP+NI + V++ DFG AR ++D
Sbjct: 117 RAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 360 -EMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ GT Y++PE + + +SDVYS G +L E++TG P+
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 30/225 (13%)
Query: 195 KEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF-FAQEVDTLSRQ 251
++ ++ +G+G N+Y R +A+K ++ + V +EV+ S
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHL 65
Query: 252 RHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFEE-RLA 308
RH +L+L G R +L+ E LGT +E + L F+E R A
Sbjct: 66 RHPNILRLYGY-FHDATRVYLILEYAPLGTVYRE-------------LQKLSKFDEQRTA 111
Query: 309 RAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALT 364
+ E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA S L
Sbjct: 112 TYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRTELC 167
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 30/283 (10%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWR-----GLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
I + I+L IG+G ++++ I+ L VA+K T+++ F QE
Sbjct: 35 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEAL 91
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER 306
T+ + H +++L+G E P W++ EL TL E L ++ + L
Sbjct: 92 TMRQFDHPHIVKLIGVITENPV--WIIMEL--CTLGELRSFLQVRKYSLDLASL------ 141
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALT 364
+ A +++ A+ YL ++ +HRD+ N+ + V++ DFG +R++ D A
Sbjct: 142 ILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 199
Query: 365 GTF--VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGK 421
G +MAPE I ++ SDV+ FG+ + EI+ G P+ + K + + G+
Sbjct: 200 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGE 257
Query: 422 LRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P P L L+ W D S RP F+ + L I
Sbjct: 258 RLPMPPNCPPT---LYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 33/222 (14%)
Query: 198 DLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF 255
+L E +G G + ++ R + DVAVK + D + + F +E + H
Sbjct: 15 ELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAALNHPA 73
Query: 256 VLQLMGACLEPPYRG---WLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL 311
++ + G ++V E + G TL++ +H G P+ P RA+
Sbjct: 74 IVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG---------PMTP-----KRAI 119
Query: 312 EI----AQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG------EM 361
E+ QA+ + H+ +IHRD+KP+NI + V++ DFG AR ++D
Sbjct: 120 EVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 362 ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ GT Y++PE + + +SDVYS G +L E++TG P+
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 39/225 (17%)
Query: 198 DLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF 255
+L E +G G + ++ R + DVAVK + D + + F +E + H
Sbjct: 15 ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAALNHPA 73
Query: 256 VLQL--MGACLEP----PYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLA 308
++ + G P PY +V E + G TL++ +H G P+ P
Sbjct: 74 IVAVYDTGEAETPAGPLPY---IVMEYVDGVTLRDIVHTEG---------PMTP-----K 116
Query: 309 RALEI----AQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG----- 359
RA+E+ QA+ + H+ +IHRD+KP+NI + V++ DFG AR ++D
Sbjct: 117 RAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 360 -EMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ GT Y++PE + + +SDVYS G +L E++TG P+
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 30/283 (10%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWR-----GLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
I + I+L IG+G ++++ I+ L VA+K T+++ F QE
Sbjct: 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEAL 68
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER 306
T+ + H +++L+G E P W++ EL TL E L ++ + L
Sbjct: 69 TMRQFDHPHIVKLIGVITENPV--WIIMEL--CTLGELRSFLQVRKYSLDLASL------ 118
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALT 364
+ A +++ A+ YL ++ +HRD+ N+ + V++ DFG +R++ D A
Sbjct: 119 ILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 176
Query: 365 GTF--VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGK 421
G +MAPE I ++ SDV+ FG+ + EI+ G P+ + K + + G+
Sbjct: 177 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGE 234
Query: 422 LRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P P L L+ W D S RP F+ + L I
Sbjct: 235 RLPMPPNCPPT---LYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 131/295 (44%), Gaps = 39/295 (13%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIY----RAIWRG---LDVAVKCIYPDFFHTNENAV---- 238
W + ++I L ++GQG+ +Y R I +G VAVK + NE+A
Sbjct: 9 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRER 61
Query: 239 TFFAQEVDTLSRQRHRFVLQLMGACL--EPPYRGWLVTELLG-TTLKEWLHGLGSQRRKE 295
F E + V++L+G +P +V EL+ LK +L L +
Sbjct: 62 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL---VVMELMAHGDLKSYLRSLRPEAENN 118
Query: 296 RMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
P P +E + A EIA M YL+ +K +HRDL N + V+I DFG R
Sbjct: 119 PGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRD 176
Query: 356 LSDGEMALTG-----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIE-KDY 408
+ + + G +MAPE ++ ++ SD++SFG++L EI + PY +
Sbjct: 177 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 236
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
+ K M+ G L + D + +L+ + W + +RP+F I LK+
Sbjct: 237 QVLKFVMDGG------YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 285
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 30/283 (10%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWR-----GLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
I + I+L IG+G ++++ I+ L VA+K T+++ F QE
Sbjct: 10 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEAL 66
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER 306
T+ + H +++L+G E P W++ EL TL E L ++ + L
Sbjct: 67 TMRQFDHPHIVKLIGVITENPV--WIIMEL--CTLGELRSFLQVRKYSLDLASL------ 116
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALT 364
+ A +++ A+ YL ++ +HRD+ N+ + V++ DFG +R++ D A
Sbjct: 117 ILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 174
Query: 365 GTF--VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGK 421
G +MAPE I ++ SDV+ FG+ + EI+ G P+ + K + + G+
Sbjct: 175 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGE 232
Query: 422 LRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P P L L+ W D S RP F+ + L I
Sbjct: 233 RLPMPPNCPPT---LYSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 131/295 (44%), Gaps = 39/295 (13%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIY----RAIWRG---LDVAVKCIYPDFFHTNENAV---- 238
W + ++I L ++GQG+ +Y R I +G VAVK + NE+A
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRER 64
Query: 239 TFFAQEVDTLSRQRHRFVLQLMGACL--EPPYRGWLVTELLG-TTLKEWLHGLGSQRRKE 295
F E + V++L+G +P +V EL+ LK +L L +
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL---VVMELMAHGDLKSYLRSLRPEAENN 121
Query: 296 RMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
P P +E + A EIA M YL+ +K +HRDL N + V+I DFG R
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 356 LSDGEMALTG-----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIE-KDY 408
+ + + G +MAPE ++ ++ SD++SFG++L EI + PY +
Sbjct: 180 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
+ K M+ G L + D + +L+ + W + +RP+F I LK+
Sbjct: 240 QVLKFVMDGG------YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 327 VIHRDLKPSNIFLDDAKHVRIADFGHARFLS---DGEMALTGTFVYMAPEVIQCEPYSEK 383
V+HRDLKP+N+FLD ++V++ DFG AR L+ D GT YM+PE + Y+EK
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEK 196
Query: 384 SDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELI 437
SD++S G +L E+ P+ + ++A ++ EGK R +L E+I
Sbjct: 197 SDIWSLGCLLYELCALMPPFTA--FSQKELAGKIREGKFRRIPYRYSDELNEII 248
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 32/235 (13%)
Query: 185 AKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF-F 241
+K W ++ EI +G+G N+Y R +A+K ++ + V
Sbjct: 1 SKKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQL 56
Query: 242 AQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVP 299
+EV+ S RH +L+L G R +L+ E LGT +E +
Sbjct: 57 RREVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRE-------------LQK 102
Query: 300 LPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HAR 354
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA
Sbjct: 103 LSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP 160
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 161 --SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 32/236 (13%)
Query: 184 QAKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF- 240
++K W ++ + ++ +G+G N+Y R +A+K ++ + V
Sbjct: 25 ESKKRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQ 80
Query: 241 FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMV 298
+EV+ S RH +L+L G R +L+ E LGT +E +
Sbjct: 81 LRREVEIQSHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQ 126
Query: 299 PLPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HA 353
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA
Sbjct: 127 KLSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHA 184
Query: 354 RFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 185 P--SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 238
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 327 VIHRDLKPSNIFLDDAKHVRIADFGHARFL---SDGEMALTGTFVYMAPEVIQCEPYSEK 383
V+HRDLKP+N+FLD ++V++ DFG AR L + A GT YM+PE + Y+EK
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEK 196
Query: 384 SDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELI 437
SD++S G +L E+ P+ + ++A ++ EGK R +L E+I
Sbjct: 197 SDIWSLGCLLYELCALMPPFTA--FSQKELAGKIREGKFRRIPYRYSDELNEII 248
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 30/225 (13%)
Query: 195 KEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF-FAQEVDTLSRQ 251
++ ++ +G+G N+Y R +A+K ++ + V +EV+ S
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHL 69
Query: 252 RHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFEE-RLA 308
RH +L+L G R +L+ E LGT +E + L F+E R A
Sbjct: 70 RHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQKLSKFDEQRTA 115
Query: 309 RAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALT 364
+ E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA S L
Sbjct: 116 TYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRTTLC 171
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 216
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 150/338 (44%), Gaps = 51/338 (15%)
Query: 160 QTPLHRYCSQTPLLQQSDLAVTVSQAKMN---GWYIDPKEIDLQEKIGQGTTANIYRAIW 216
TPL R ++ + + VS+ ++ W ++ L + +G+G + A
Sbjct: 43 NTPLVRITTRLSSTADTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEA 102
Query: 217 RGLD---------VAVKCIYPDFFHTNENAVTFFAQEVDTLSR-QRHRFVLQLMGACLEP 266
G+D VAVK + D E ++ E++ + +H+ ++ L+GAC +
Sbjct: 103 VGIDKDKPKEAVTVAVKMLKDD---ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159
Query: 267 PYRGWLVTELLGTTLKEWLHGLGSQRRKERM--------VPLP--PFEERLARALEIAQA 316
+V L+E+L RR M VP F++ ++ ++A+
Sbjct: 160 GPLYVIVEYASKGNLREYLRA----RRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARG 215
Query: 317 MQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT-----FVYMA 371
M+YL QK IHRDL N+ + + ++IADFG AR +++ + T +MA
Sbjct: 216 MEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMA 273
Query: 372 PEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY----IEKDYKPAKIAMEVGEGKLRPAL 426
PE + Y+ +SDV+SFG+++ EI T G PY +E+ +K ++ G +PA
Sbjct: 274 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK----LLKEGHRMDKPA- 328
Query: 427 PEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
EL ++ W S RP+F + L I
Sbjct: 329 ----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 30/283 (10%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWR-----GLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
I + I+L IG+G ++++ I+ L VA+K T+++ F QE
Sbjct: 4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEAL 60
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER 306
T+ + H +++L+G E P W++ EL TL E L ++ + L
Sbjct: 61 TMRQFDHPHIVKLIGVITENPV--WIIMEL--CTLGELRSFLQVRKYSLDLASL------ 110
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALT 364
+ A +++ A+ YL ++ +HRD+ N+ + V++ DFG +R++ D A
Sbjct: 111 ILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 168
Query: 365 GTF--VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGK 421
G +MAPE I ++ SDV+ FG+ + EI+ G P+ + K + + G+
Sbjct: 169 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGE 226
Query: 422 LRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P P L L+ W D S RP F+ + L I
Sbjct: 227 RLPMPPNCPPT---LYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 5/114 (4%)
Query: 327 VIHRDLKPSNIFLDDAKHVRIADFGHARFLS-DGEMALT--GTFVYMAPEVIQCEPYSEK 383
V+HRDLKP+N+FLD ++V++ DFG AR L+ D A T GT YM+PE + Y+EK
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEK 196
Query: 384 SDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELI 437
SD++S G +L E+ P+ + ++A ++ EGK R +L E+I
Sbjct: 197 SDIWSLGCLLYELCALMPPFTA--FSQKELAGKIREGKFRRIPYRYSDELNEII 248
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 21/177 (11%)
Query: 234 NENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR 293
EN V + +E D +SR H F ++L + + ++ L +++ +GS
Sbjct: 73 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--- 129
Query: 294 KERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG 351
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DFG
Sbjct: 130 ---------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFG 178
Query: 352 HARFLS-DGEMALTGTFV----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ LS + + A +FV Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 179 TAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 199 LQEKIGQGTTANI--YRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFV 256
L + IG+G A + R I G +VAVK I D N +++ +EV + H +
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 257 LQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
++L +E +LV E G + ++L G + KE A+ +I
Sbjct: 76 VKLF-EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR----------AKFRQIVS 124
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALTGTFVYMAPE 373
A+QY H++ ++HRDLK N+ LD +++IADFG + + G A G Y APE
Sbjct: 125 AVQYCHQKF--IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPE 182
Query: 374 VIQCEPY-SEKSDVYSFGIILNEIITGNHPY 403
+ Q + Y + DV+S G+IL +++G+ P+
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 39/225 (17%)
Query: 198 DLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF 255
+L E +G G + ++ R + DVAVK + D + + F +E + H
Sbjct: 15 ELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAALNHPA 73
Query: 256 VLQL--MGACLEP----PYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLA 308
++ + G P PY +V E + G TL++ +H G P+ P
Sbjct: 74 IVAVYDTGEAETPAGPLPY---IVMEYVDGVTLRDIVHTEG---------PMTP-----K 116
Query: 309 RALEI----AQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG----- 359
RA+E+ QA+ + H+ +IHRD+KP+NI + V++ DFG AR ++D
Sbjct: 117 RAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 174
Query: 360 -EMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ GT Y++PE + + +SDVYS G +L E++TG P+
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 30/225 (13%)
Query: 195 KEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF-FAQEVDTLSRQ 251
++ ++ +G+G N+Y R +A+K ++ + V +EV+ S
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHL 64
Query: 252 RHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFEE-RLA 308
RH +L+L G R +L+ E LGT +E + L F+E R A
Sbjct: 65 RHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQKLSKFDEQRTA 110
Query: 309 RAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALT 364
+ E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA S L
Sbjct: 111 TYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRTTLC 166
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 167 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 211
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 30/225 (13%)
Query: 195 KEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF-FAQEVDTLSRQ 251
++ ++ +G+G N+Y R +A+K ++ + V +EV+ S
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHL 65
Query: 252 RHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFEE-RLA 308
RH +L+L G R +L+ E LGT +E + L F+E R A
Sbjct: 66 RHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQKLSKFDEQRTA 111
Query: 309 RAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALT 364
+ E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA S L
Sbjct: 112 TYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRXXLC 167
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 110/234 (47%), Gaps = 32/234 (13%)
Query: 186 KMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF-FA 242
K W ++ EI +G+G N+Y R +A+K ++ + V
Sbjct: 1 KKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLR 56
Query: 243 QEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPL 300
+EV+ S RH +L+L G R +L+ E LGT +E + L
Sbjct: 57 REVEIQSHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRE-------------LQKL 102
Query: 301 PPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARF 355
F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA
Sbjct: 103 SKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP- 159
Query: 356 LSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 160 -SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 30/225 (13%)
Query: 195 KEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF-FAQEVDTLSRQ 251
++ ++ +G+G N+Y R +A+K ++ + V +EV+ S
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHL 65
Query: 252 RHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFEE-RLA 308
RH +L+L G R +L+ E LGT +E + L F+E R A
Sbjct: 66 RHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQKLSKFDEQRTA 111
Query: 309 RAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALT 364
+ E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA S L
Sbjct: 112 TYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRTXLC 167
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 30/225 (13%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTF-FAQEVDTLSRQ 251
++ D+ +G+G N+Y A R +A+K ++ + V +EV+ S
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKT--QLEKAGVEHQLRREVEIQSHL 69
Query: 252 RHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFEE-RLA 308
RH +L+L G R +L+ E LGT +E + L F+E R A
Sbjct: 70 RHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQKLSRFDEQRTA 115
Query: 309 RAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALT 364
+ E+A A+ Y H ++ VIHRD+KP N+ L ++IADFG HA S L
Sbjct: 116 TYITELANALSYCHSKR--VIHRDIKPENLLLGSNGELKIADFGWSVHAP--SSRRTTLC 171
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQ 216
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 8/113 (7%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHV---RIADFGHARFLSDGEMA--LTGT 366
+I+ A++YLHE + +IHRDLKP NI L +I D G+A+ L GE+ GT
Sbjct: 130 DISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT 187
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGE 419
Y+APE+++ + Y+ D +SFG + E ITG P++ +++P + +V E
Sbjct: 188 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL-PNWQPVQWHGKVRE 239
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 8/113 (7%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHV---RIADFGHARFLSDGEMA--LTGT 366
+I+ A++YLHE + +IHRDLKP NI L +I D G+A+ L GE+ GT
Sbjct: 129 DISSALRYLHENR--IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGT 186
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGE 419
Y+APE+++ + Y+ D +SFG + E ITG P++ +++P + +V E
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFL-PNWQPVQWHGKVRE 238
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 32/236 (13%)
Query: 184 QAKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF- 240
++K W ++ EI +G+G N+Y R +A+K ++ + V
Sbjct: 2 ESKKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQ 57
Query: 241 FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMV 298
+EV+ S RH +L+L G R +L+ E LGT +E +
Sbjct: 58 LRREVEIQSHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQ 103
Query: 299 PLPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HA 353
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IA+FG HA
Sbjct: 104 KLSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIANFGWSVHA 161
Query: 354 RFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 162 P--SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 30/225 (13%)
Query: 195 KEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF-FAQEVDTLSRQ 251
++ ++ +G+G N+Y R +A+K ++ + V +EV+ S
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHL 65
Query: 252 RHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFEE-RLA 308
RH +L+L G R +L+ E LGT +E + L F+E R A
Sbjct: 66 RHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQKLSKFDEQRTA 111
Query: 309 RAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALT 364
+ E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA S L
Sbjct: 112 TYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRTDLC 167
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 212
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 30/283 (10%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWR-----GLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
I + I+L IG+G ++++ I+ + VA+K T+++ F QE
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEAL 63
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER 306
T+ + H +++L+G E P W++ EL TL E L ++ + L
Sbjct: 64 TMRQFDHPHIVKLIGVITENPV--WIIMEL--CTLGELRSFLQVRKFSLDLASL------ 113
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT 366
+ A +++ A+ YL ++ +HRD+ N+ + V++ DFG +R++ D
Sbjct: 114 ILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASK 171
Query: 367 ----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGK 421
+MAPE I ++ SDV+ FG+ + EI+ G P+ + K + + G+
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGE 229
Query: 422 LRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P P L L+ W D S RP F+ + L I
Sbjct: 230 RLPMPPNCPPT---LYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 93/178 (52%), Gaps = 23/178 (12%)
Query: 234 NENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWL-VTELLGTTLKEWLHGLGSQR 292
EN V + +E D +SR H F ++L C + + + ++ L +++ +GS
Sbjct: 77 KENKVPYVTRERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGS-- 133
Query: 293 RKERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADF 350
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DF
Sbjct: 134 ----------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDF 181
Query: 351 GHARFLS-DGEMALTGTFV----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
G A+ LS + + A FV Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 182 GTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 199 LQEKIGQGTTANI--YRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFV 256
L + IG+G A + R I G +VA+K I D N ++ +EV + H +
Sbjct: 19 LLKTIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 257 LQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
++L +E +L+ E G + ++L G + KE ++ +I
Sbjct: 77 VKLF-EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR----------SKFRQIVS 125
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDGEM-ALTGTFVYMAPE 373
A+QY H+++ ++HRDLK N+ LD +++IADFG + F G++ A G Y APE
Sbjct: 126 AVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPE 183
Query: 374 VIQCEPY-SEKSDVYSFGIILNEIITGNHPY 403
+ Q + Y + DV+S G+IL +++G+ P+
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 21/177 (11%)
Query: 234 NENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR 293
EN V + +E D +SR H F ++L + + ++ L +++ +GS
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--- 128
Query: 294 KERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG 351
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DFG
Sbjct: 129 ---------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFG 177
Query: 352 HARFLS-DGEMALTGTFV----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ LS + + A FV Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 178 TAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W ++ L + +G+G + A G+D VAVK + D E ++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSD 86
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM-- 297
E++ + +H+ ++ L+GAC + +V L+E+L RR M
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEY 142
Query: 298 ------VPLP--PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
VP F++ ++ ++A+ M+YL QK IHRDL N+ + + +RIAD
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMRIAD 200
Query: 350 FGHARFLSDGEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
FG AR +++ + T +MAPE + Y+ +SDV+SFG+++ EI T G PY
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +PA EL ++ W S RP+F +
Sbjct: 261 PGIPVEELFK----LLKEGHRMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 460 SLKNI 464
L I
Sbjct: 312 DLDRI 316
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 21/176 (11%)
Query: 235 ENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRK 294
EN V + +E D +SR H F ++L + + ++ L +++ +GS
Sbjct: 70 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---- 125
Query: 295 ERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGH 352
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DFG
Sbjct: 126 --------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGT 175
Query: 353 ARFLS-DGEMALTGTFV----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ LS + + A +FV Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 176 AKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 21/177 (11%)
Query: 234 NENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR 293
EN V + +E D +SR H F ++L + + ++ L +++ +GS
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--- 128
Query: 294 KERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG 351
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DFG
Sbjct: 129 ---------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFG 177
Query: 352 HARFLS-DGEMALTGTFV----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ LS + + A FV Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 178 TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 127/283 (44%), Gaps = 30/283 (10%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWR-----GLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
I + I+L IG+G ++++ I+ + VA+K T+++ F QE
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEAL 63
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER 306
T+ + H +++L+G E P W++ EL TL E L ++ + L
Sbjct: 64 TMRQFDHPHIVKLIGVITENPV--WIIMEL--CTLGELRSFLQVRKYSLDLASL------ 113
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALT 364
+ A +++ A+ YL ++ +HRD+ N+ + V++ DFG +R++ D A
Sbjct: 114 ILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 365 GTF--VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGK 421
G +MAPE I ++ SDV+ FG+ + EI+ G P+ + K + + G+
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGE 229
Query: 422 LRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P P L L+ W D S RP F+ + L I
Sbjct: 230 RLPMPPNCPPT---LYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 39/225 (17%)
Query: 198 DLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF 255
+L E +G G + ++ R + DVAVK + D + + F +E + H
Sbjct: 32 ELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLAR-DPSFYLRFRREAQNAAALNHPA 90
Query: 256 VLQL--MGACLEP----PYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLA 308
++ + G P PY +V E + G TL++ +H G P+ P
Sbjct: 91 IVAVYDTGEAETPAGPLPY---IVMEYVDGVTLRDIVHTEG---------PMTP-----K 133
Query: 309 RALEI----AQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG----- 359
RA+E+ QA+ + H+ +IHRD+KP+NI + V++ DFG AR ++D
Sbjct: 134 RAIEVIADACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 191
Query: 360 -EMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ GT Y++PE + + +SDVYS G +L E++TG P+
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 21/177 (11%)
Query: 234 NENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR 293
EN V + +E D +SR H F ++L + + ++ L +++ +GS
Sbjct: 70 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--- 126
Query: 294 KERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG 351
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DFG
Sbjct: 127 ---------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFG 175
Query: 352 HARFLS-DGEMALTGTFV----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ LS + + A FV Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 176 TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 21/177 (11%)
Query: 234 NENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR 293
EN V + +E D +SR H F ++L + + ++ L +++ +GS
Sbjct: 75 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--- 131
Query: 294 KERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG 351
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DFG
Sbjct: 132 ---------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFG 180
Query: 352 HARFLS-DGEMALTGTFV----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ LS + + A FV Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 181 TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 21/177 (11%)
Query: 234 NENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR 293
EN V + +E D +SR H F ++L + + ++ L +++ +GS
Sbjct: 70 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--- 126
Query: 294 KERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG 351
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DFG
Sbjct: 127 ---------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFG 175
Query: 352 HARFLS-DGEMALTGTFV----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ LS + + A FV Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 176 TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 21/177 (11%)
Query: 234 NENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR 293
EN V + +E D +SR H F ++L + + ++ L +++ +GS
Sbjct: 70 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--- 126
Query: 294 KERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG 351
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DFG
Sbjct: 127 ---------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFG 175
Query: 352 HARFLS-DGEMALTGTFV----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ LS + + A FV Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 176 TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 21/177 (11%)
Query: 234 NENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR 293
EN V + +E D +SR H F ++L + + ++ L +++ +GS
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--- 128
Query: 294 KERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG 351
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DFG
Sbjct: 129 ---------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFG 177
Query: 352 HARFLS-DGEMALTGTFV----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ LS + + A FV Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 178 TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 21/177 (11%)
Query: 234 NENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR 293
EN V + +E D +SR H F ++L + + ++ L +++ +GS
Sbjct: 73 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--- 129
Query: 294 KERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG 351
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DFG
Sbjct: 130 ---------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFG 178
Query: 352 HARFLS-DGEMALTGTFV----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ LS + + A FV Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 179 TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 116/252 (46%), Gaps = 20/252 (7%)
Query: 203 IGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGA 262
+G+GT +Y R L V+ + + +E+ +H+ ++Q +G+
Sbjct: 16 LGKGTYGIVYAG--RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 263 CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLA-RALEIAQAMQYLH 321
E + + ++ G +L L + + PL E+ + +I + ++YLH
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALL--------RSKWGPLKDNEQTIGFYTKQILEGLKYLH 125
Query: 322 EQKPKVIHRDLKPSNIFLDDAKHV-RIADFGHARFLSD---GEMALTGTFVYMAPEVIQC 377
+ + ++HRD+K N+ ++ V +I+DFG ++ L+ TGT YMAPE+I
Sbjct: 126 DNQ--IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDK 183
Query: 378 EP--YSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALPEEDGQLRE 435
P Y + +D++S G + E+ TG P+ E +P +VG K+ P +PE +
Sbjct: 184 GPRGYGKAADIWSLGCTIIEMATGKPPFYELG-EPQAAMFKVGMFKVHPEIPESMSAEAK 242
Query: 436 LIELICLSWDGD 447
L C D D
Sbjct: 243 AFILKCFEPDPD 254
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 21/177 (11%)
Query: 234 NENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR 293
EN V + +E D +SR H F ++L + + ++ L +++ +GS
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--- 128
Query: 294 KERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG 351
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DFG
Sbjct: 129 ---------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFG 177
Query: 352 HARFLS-DGEMALTGTFV----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ LS + + A FV Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 178 TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 21/177 (11%)
Query: 234 NENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR 293
EN V + +E D +SR H F ++L + + ++ L +++ +GS
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--- 128
Query: 294 KERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG 351
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DFG
Sbjct: 129 ---------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFG 177
Query: 352 HARFLS-DGEMALTGTFV----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ LS + + A FV Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 178 TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 21/211 (9%)
Query: 199 LQEKIGQGTTANI--YRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFV 256
L + IG+G A + R I G +VAVK I D N +++ +EV H +
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 257 LQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
++L +E +LV E G + ++L G + KE A+ +I
Sbjct: 76 VKLF-EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEAR----------AKFRQIVS 124
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALTGTFVYMAPE 373
A+QY H++ ++HRDLK N+ LD +++IADFG + + G A G Y APE
Sbjct: 125 AVQYCHQKF--IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPE 182
Query: 374 VIQCEPY-SEKSDVYSFGIILNEIITGNHPY 403
+ Q + Y + DV+S G+IL +++G+ P+
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W ++ L + +G+G + A G+D VAVK + D E ++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSD 86
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM-- 297
E++ + +H+ ++ L+GAC + +V L+E+L RR M
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEX 142
Query: 298 ------VPLP--PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
VP F++ ++ ++A+ M+YL QK IHRDL N+ + + ++IAD
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIAD 200
Query: 350 FGHARFLSDGEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
FG AR +++ + T +MAPE + Y+ +SDV+SFG+++ EI T G PY
Sbjct: 201 FGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +PA EL ++ W S RP+F +
Sbjct: 261 PGIPVEELFK----LLKEGHRMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 460 SLKNI 464
L I
Sbjct: 312 DLDRI 316
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 127/283 (44%), Gaps = 30/283 (10%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWR-----GLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
I + I+L IG+G ++++ I+ + VA+K T+++ F QE
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEAL 63
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER 306
T+ + H +++L+G E P W++ EL TL E L ++ + L
Sbjct: 64 TMRQFDHPHIVKLIGVITENPV--WIIMEL--CTLGELRSFLQVRKFSLDLASL------ 113
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALT 364
+ A +++ A+ YL ++ +HRD+ N+ + V++ DFG +R++ D A
Sbjct: 114 ILYAYQLSTALAYLESKR--FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 365 GTF--VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGK 421
G +MAPE I ++ SDV+ FG+ + EI+ G P+ + K + + G+
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKNNDVIGRIENGE 229
Query: 422 LRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P P L L+ W D S RP F+ + L I
Sbjct: 230 RLPMPPNCPPT---LYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 91/177 (51%), Gaps = 21/177 (11%)
Query: 234 NENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR 293
EN V + +E D +SR H F ++L + + ++ L +++ +GS
Sbjct: 54 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--- 110
Query: 294 KERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG 351
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DFG
Sbjct: 111 ---------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFG 159
Query: 352 HARFLS-DGEMALTGTFV----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ LS + + A FV Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 160 TAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 27/218 (12%)
Query: 194 PKEI-DLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSR 250
P+E+ D+ EK+G+G+ ++Y+AI + G VA+K + E+ + +E+ + +
Sbjct: 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV------PVESDLQEIIKEISIMQQ 80
Query: 251 QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARA 310
V++ G+ + W+V E G GS R+ E+ +A
Sbjct: 81 CDSPHVVKYYGSYFKNT-DLWIVMEYCGA---------GSVSDIIRLRNKTLTEDEIATI 130
Query: 311 LE-IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA----LTG 365
L+ + ++YLH + IHRD+K NI L+ H ++ADFG A L+D MA + G
Sbjct: 131 LQSTLKGLEYLHFMRK--IHRDIKAGNILLNTEGHAKLADFGVAGQLTD-XMAKRNXVIG 187
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
T +MAPEVIQ Y+ +D++S GI E+ G PY
Sbjct: 188 TPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPY 225
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 130/294 (44%), Gaps = 30/294 (10%)
Query: 181 TVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWR-----GLDVAVKCIYPDFFHTNE 235
T + + I + I+L IG+G ++++ I+ + VA+K T++
Sbjct: 376 TYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSD 432
Query: 236 NAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKE 295
+ F QE T+ + H +++L+G E P W++ EL TL E L ++
Sbjct: 433 SVREKFLQEALTMRQFDHPHIVKLIGVITENPV--WIIMEL--CTLGELRSFLQVRKFSL 488
Query: 296 RMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
+ L + A +++ A+ YL ++ +HRD+ N+ + V++ DFG +R+
Sbjct: 489 DLASL------ILYAYQLSTALAYLESKR--FVHRDIAARNVLVSATDCVKLGDFGLSRY 540
Query: 356 LSDGEM--ALTGTF--VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKP 410
+ D A G +MAPE I ++ SDV+ FG+ + EI+ G P+ + K
Sbjct: 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKN 598
Query: 411 AKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ + G+ P P L L+ W D S RP F+ + L I
Sbjct: 599 NDVIGRIENGERLPMPPNCPPT---LYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W ++ L + +G+G + A G+D VAVK + D E ++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSD 86
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM-- 297
E++ + +H+ ++ L+GAC + +V L+E+L RR M
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEY 142
Query: 298 ------VPLP--PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
VP F++ ++ ++A+ M+YL QK IHRDL N+ + + ++IAD
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIAD 200
Query: 350 FGHARFLSDGEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
FG AR +++ + T +MAPE + Y+ +SDV+SFG+++ EI T G PY
Sbjct: 201 FGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +PA EL ++ W S RP+F +
Sbjct: 261 PGIPVEELFK----LLKEGHRMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 460 SLKNI 464
L I
Sbjct: 312 DLDRI 316
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 131/295 (44%), Gaps = 39/295 (13%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIY----RAIWRG---LDVAVKCIYPDFFHTNENAV---- 238
W + ++I L ++GQG+ +Y R I +G VAVK + NE+A
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRER 64
Query: 239 TFFAQEVDTLSRQRHRFVLQLMGACL--EPPYRGWLVTELLG-TTLKEWLHGLGSQRRKE 295
F E + V++L+G +P +V EL+ LK +L L +
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL---VVMELMAHGDLKSYLRSLRPEAENN 121
Query: 296 RMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
P P +E + A EIA M YL+ +K +HRDL N + V+I DFG R
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 356 LSDGEMALTG-----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIE-KDY 408
+ + + G +MAPE ++ ++ SD++SFG++L EI + PY +
Sbjct: 180 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
+ K M+ G L + D + +L+ + W + +RP+F I LK+
Sbjct: 240 QVLKFVMDGG------YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 30/225 (13%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTF-FAQEVDTLSRQ 251
++ D+ +G+G N+Y A R +A+K ++ + V +EV+ S
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKT--QLEKAGVEHQLRREVEIQSHL 69
Query: 252 RHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFEE-RLA 308
RH +L+L G R +L+ E LGT +E + L F+E R A
Sbjct: 70 RHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQKLSRFDEQRTA 115
Query: 309 RAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALT 364
+ E+A A+ Y H ++ VIHRD+KP N+ L ++IADFG HA S L
Sbjct: 116 TYITELANALSYCHSKR--VIHRDIKPENLLLGSNGELKIADFGWSVHAP--SSRRDTLC 171
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 172 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQ 216
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 199 LQEKIGQGTTANI--YRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFV 256
L + IG+G A + R I G +VAVK I D N +++ +EV + H +
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 257 LQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
++L +E +LV E G + ++L G + KE A+ +I
Sbjct: 76 VKLF-EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR----------AKFRQIVS 124
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALTGTFVYMAPE 373
A+QY H++ ++HRDLK N+ LD +++IADFG + + G G+ Y APE
Sbjct: 125 AVQYCHQKF--IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 182
Query: 374 VIQCEPY-SEKSDVYSFGIILNEIITGNHPY 403
+ Q + Y + DV+S G+IL +++G+ P+
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 199 LQEKIGQGTTANI--YRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFV 256
L + IG+G A + R I G +VAVK I D N +++ +EV + H +
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 257 LQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
++L +E +LV E G + ++L G + KE A+ +I
Sbjct: 76 VKLF-EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR----------AKFRQIVS 124
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALTGTFVYMAPE 373
A+QY H++ ++HRDLK N+ LD +++IADFG + + G G+ Y APE
Sbjct: 125 AVQYCHQKF--IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 182
Query: 374 VIQCEPY-SEKSDVYSFGIILNEIITGNHPY 403
+ Q + Y + DV+S G+IL +++G+ P+
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 130/294 (44%), Gaps = 30/294 (10%)
Query: 181 TVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWR-----GLDVAVKCIYPDFFHTNE 235
T + + I + I+L IG+G ++++ I+ + VA+K T++
Sbjct: 376 TYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSD 432
Query: 236 NAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKE 295
+ F QE T+ + H +++L+G E P W++ EL TL E L ++
Sbjct: 433 SVREKFLQEALTMRQFDHPHIVKLIGVITENPV--WIIMEL--CTLGELRSFLQVRKFSL 488
Query: 296 RMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
+ L + A +++ A+ YL ++ +HRD+ N+ + V++ DFG +R+
Sbjct: 489 DLASL------ILYAYQLSTALAYLESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSRY 540
Query: 356 LSDGEM--ALTGTF--VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKP 410
+ D A G +MAPE I ++ SDV+ FG+ + EI+ G P+ + K
Sbjct: 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF--QGVKN 598
Query: 411 AKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ + G+ P P L L+ W D S RP F+ + L I
Sbjct: 599 NDVIGRIENGERLPMPPNCPPT---LYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 38/257 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ E + F +E++ L +H +++ G C R L+ E L +L+++L
Sbjct: 52 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL---- 107
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
Q ER+ + + L +I + M+YL ++ IHRDL NI +++ V+I D
Sbjct: 108 -QAHAERIDHI----KLLQYTSQICKGMEYLGTKR--YIHRDLATRNILVENENRVKIGD 160
Query: 350 FGHARFL-SDGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG + L D E + APE + +S SDV+SFG++L E+ T Y
Sbjct: 161 FGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT----Y 216
Query: 404 IEKDYK-PAKIAMEVGEGKL--------------RPALPEEDGQLRELIELICLSWDGDA 448
IEK PA+ +G K LP DG E+ ++ W+ +
Sbjct: 217 IEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNV 276
Query: 449 SVRPSFSSITCSLKNIQ 465
+ RPSF + + I+
Sbjct: 277 NQRPSFRDLALRVDQIR 293
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W ++ L + +G+G + A G+D VAVK + D E ++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSD 86
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM-- 297
E++ + +H+ ++ L+GAC + +V L+E+L RR M
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRA----RRPPGMEY 142
Query: 298 ------VPLP--PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
VP F++ ++ ++A+ M+YL QK IHRDL N+ + + ++IAD
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIAD 200
Query: 350 FGHARFLSDGEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
FG AR +++ + T +MAPE + Y+ +SDV+SFG+++ EI T G PY
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +PA EL ++ W S RP+F +
Sbjct: 261 PGIPVEELFK----LLKEGHRMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 460 SLKNI 464
L I
Sbjct: 312 DLDRI 316
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 78/130 (60%), Gaps = 12/130 (9%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNI-FLDDAKH---VRIADFGHARFL 356
F ER A A+ I + ++YLH Q V+HRDLKPSNI ++D++ + +RI DFG A+ L
Sbjct: 113 FSEREASAVLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
Query: 357 -SDGEMALTGTFV--YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEK-DYKPAK 412
++ + +T + ++APEV++ + Y D++S G++L ++TG P+ D P +
Sbjct: 171 RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEE 230
Query: 413 IAMEVGEGKL 422
I +G GK
Sbjct: 231 ILARIGSGKF 240
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 110/236 (46%), Gaps = 32/236 (13%)
Query: 184 QAKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF- 240
++K W ++ EI +G+G N+Y R +A+K ++ + V
Sbjct: 4 ESKKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQ 59
Query: 241 FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELL--GTTLKEWLHGLGSQRRKERMV 298
+EV+ S RH +L+L G R +L+ E G KE +
Sbjct: 60 LRREVEIQSHLRHPNILRLYG-YFHDATRVYLILEYAPRGEVYKE-------------LQ 105
Query: 299 PLPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HA 353
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA
Sbjct: 106 KLSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 354 RFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 164 P--SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 21/176 (11%)
Query: 235 ENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRK 294
EN V + +E D +SR H F ++L + + ++ L +++ +GS
Sbjct: 70 ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---- 125
Query: 295 ERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGH 352
F+E R EI A++YLH + +IHRDLKP NI L++ H++I DFG
Sbjct: 126 --------FDETCTRFYTAEIVSALEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGT 175
Query: 353 ARFLS-DGEMALTGTFV----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
A+ LS + + A FV Y++PE++ + + SD+++ G I+ +++ G P+
Sbjct: 176 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 103/241 (42%), Gaps = 42/241 (17%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHR 254
++I L E +G+G ++R W+G +VAVK F + + F E+ RH
Sbjct: 37 RQITLLECVGKGRYGEVWRGSWQGENVAVK-----IFSSRDEKSWFRETELYNTVMLRHE 91
Query: 255 FVLQLMGACLEPPYRG---WLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL 311
+L + + + + WL+T H +GS ++ L L L
Sbjct: 92 NILGFIASDMTSRHSSTQLWLITH---------YHEMGSLYDYLQLTTLDTV-SCLRIVL 141
Query: 312 EIAQAMQYLH------EQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF-------LSD 358
IA + +LH + KP + HRDLK NI + IAD G A L
Sbjct: 142 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 201
Query: 359 GEMALTGTFVYMAPEV------IQCEPYSEKSDVYSFGIILNEI---ITGNHPYIEKDYK 409
G GT YMAPEV + C ++ D+++FG++L E+ + N I +DYK
Sbjct: 202 GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNG--IVEDYK 259
Query: 410 P 410
P
Sbjct: 260 P 260
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W ++ L + +G+G + A G+D VAVK + D E ++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSD 86
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM-- 297
E++ + +H+ ++ L+GAC + +V L+E+L RR M
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEY 142
Query: 298 ------VPLP--PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
VP F++ ++ ++A+ M+YL QK IHRDL N+ + + ++IAD
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIAD 200
Query: 350 FGHARFLSDGEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
FG AR +++ + T +MAPE + Y+ +SDV+SFG+++ EI T G PY
Sbjct: 201 FGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +PA EL ++ W S RP+F +
Sbjct: 261 PGIPVEELFK----LLKEGHRMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 460 SLKNI 464
L I
Sbjct: 312 DLDRI 316
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 110/236 (46%), Gaps = 32/236 (13%)
Query: 184 QAKMNGWYIDPKEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF- 240
++K W ++ EI +G+G N+Y R +A+K ++ + V
Sbjct: 4 ESKKRQWALEDFEIG--RPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQ 59
Query: 241 FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELL--GTTLKEWLHGLGSQRRKERMV 298
+EV+ S RH +L+L G R +L+ E G KE +
Sbjct: 60 LRREVEIQSHLRHPNILRLYG-YFHDATRVYLILEYAPRGEVYKE-------------LQ 105
Query: 299 PLPPFEE-RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HA 353
L F+E R A + E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA
Sbjct: 106 KLSKFDEQRTATYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHA 163
Query: 354 RFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
S L GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 164 P--SSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 217
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 108/219 (49%), Gaps = 25/219 (11%)
Query: 193 DPKEI-DLQEKIGQGTTANI--YRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLS 249
DP+ + D KIG+G+T + R G VAVK + D + F EV +
Sbjct: 42 DPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMM--DLRKQQRRELLF--NEVVIMR 97
Query: 250 RQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLAR 309
+H V+++ Y+ +LV E L L E+L G G+ V L EE++A
Sbjct: 98 DYQHFNVVEM--------YKSYLVGEELWV-LMEFLQG-GALTDIVSQVRLN--EEQIAT 145
Query: 310 ALE-IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG---EMALTG 365
E + QA+ YLH Q VIHRD+K +I L V+++DFG +S L G
Sbjct: 146 VCEAVLQALAYLHAQG--VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVG 203
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T +MAPEVI Y+ + D++S GI++ E++ G PY
Sbjct: 204 TPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYF 242
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 30/225 (13%)
Query: 195 KEIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTF-FAQEVDTLSRQ 251
++ ++ +G+G N+Y R +A+K ++ + V +EV+ S
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSHL 68
Query: 252 RHRFVLQLMGACLEPPYRGWLVTEL--LGTTLKEWLHGLGSQRRKERMVPLPPFEE-RLA 308
RH +L+L G R +L+ E LGT +E + L F+E R A
Sbjct: 69 RHPNILRLYG-YFHDATRVYLILEYAPLGTVYRE-------------LQKLSKFDEQRTA 114
Query: 309 RAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALT 364
+ E+A A+ Y H ++ VIHRD+KP N+ L A ++IADFG HA S L
Sbjct: 115 TYITELANALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRDDLC 170
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+ PE+I+ + EK D++S G++ E + G P+ Y+
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 215
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W ++ L + +G+G + A G+D VAVK + D E ++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSD 86
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM-- 297
E++ + +H+ ++ L+GAC + +V L+E+L RR M
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRA----RRPPGMEY 142
Query: 298 ------VPLP--PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
VP F++ ++ ++A+ M+YL QK IHRDL N+ + + ++IAD
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIAD 200
Query: 350 FGHARFLSDGEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
FG AR +++ + T +MAPE + Y+ +SDV+SFG+++ EI T G PY
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +PA EL ++ W S RP+F +
Sbjct: 261 PGIPVEELFK----LLKEGHRMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 460 SLKNI 464
L I
Sbjct: 312 DLDRI 316
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 107/211 (50%), Gaps = 21/211 (9%)
Query: 199 LQEKIGQGTTANI--YRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFV 256
L + IG+G A + R I G +VA+K I D N ++ +EV + H +
Sbjct: 16 LLKTIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 257 LQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
++L +E +L+ E G + ++L G + KE ++ +I
Sbjct: 74 VKLF-EVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR----------SKFRQIVS 122
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDGEM-ALTGTFVYMAPE 373
A+QY H+++ ++HRDLK N+ LD +++IADFG + F G++ G+ Y APE
Sbjct: 123 AVQYCHQKR--IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPE 180
Query: 374 VIQCEPY-SEKSDVYSFGIILNEIITGNHPY 403
+ Q + Y + DV+S G+IL +++G+ P+
Sbjct: 181 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 211
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W ++ L + +G+G + A G+D VAVK + D E ++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSD 86
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM-- 297
E++ + +H+ ++ L+GAC + +V L+E+L RR M
Sbjct: 87 LVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEY 142
Query: 298 ------VPLP--PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
VP F++ ++ ++A+ M+YL QK IHRDL N+ + + ++IAD
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIAD 200
Query: 350 FGHARFLSDGEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
FG AR +++ + T +MAPE + Y+ +SDV+SFG+++ EI T G PY
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +PA EL ++ W S RP+F +
Sbjct: 261 PGIPVEELFK----LLKEGHRMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 460 SLKNI 464
L I
Sbjct: 312 DLDRI 316
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W ++ L + +G+G + A G+D VAVK + D E ++
Sbjct: 19 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSD 75
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM-- 297
E++ + +H+ ++ L+GAC + +V L+E+L RR M
Sbjct: 76 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEY 131
Query: 298 ------VPLP--PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
VP F++ ++ ++A+ M+YL QK IHRDL N+ + + ++IAD
Sbjct: 132 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIAD 189
Query: 350 FGHARFLSDGEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
FG AR +++ + T +MAPE + Y+ +SDV+SFG+++ EI T G PY
Sbjct: 190 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +PA EL ++ W S RP+F +
Sbjct: 250 PGIPVEELFK----LLKEGHRMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 300
Query: 460 SLKNI 464
L I
Sbjct: 301 DLDRI 305
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 103/241 (42%), Gaps = 42/241 (17%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHR 254
++I L E +G+G ++R W+G +VAVK F + + F E+ RH
Sbjct: 8 RDITLLECVGKGRYGEVWRGSWQGENVAVK-----IFSSRDEKSWFRETELYNTVMLRHE 62
Query: 255 FVLQLMGACLEPPYRG---WLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL 311
+L + + + + WL+T H +GS ++ L L L
Sbjct: 63 NILGFIASDMTSRHSSTQLWLITH---------YHEMGSLYDYLQLTTLDTV-SCLRIVL 112
Query: 312 EIAQAMQYLH------EQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF-------LSD 358
IA + +LH + KP + HRDLK NI + IAD G A L
Sbjct: 113 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDV 172
Query: 359 GEMALTGTFVYMAPEV------IQCEPYSEKSDVYSFGIILNEI---ITGNHPYIEKDYK 409
G GT YMAPEV + C ++ D+++FG++L E+ + N I +DYK
Sbjct: 173 GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNG--IVEDYK 230
Query: 410 P 410
P
Sbjct: 231 P 231
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 81/150 (54%), Gaps = 10/150 (6%)
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG---EMALTGTF 367
++I A++++H++K ++HRD+K NIFL V++ DFG AR L+ A GT
Sbjct: 132 VQICLALKHVHDRK--ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTP 189
Query: 368 VYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALP 427
Y++PE+ + +PY+ KSD+++ G +L E+ T H + K + +++ G P
Sbjct: 190 YYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK--NLVLKIISGSFPPVSL 247
Query: 428 EEDGQLRELIELICLSWDGDASVRPSFSSI 457
LR L+ + + + RPS +SI
Sbjct: 248 HYSYDLRSLVSQL---FKRNPRDRPSVNSI 274
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W ++ L + +G+G + A G+D VAVK + D E ++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEEDLSD 86
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM-- 297
E++ + +H+ ++ L+GAC + +V L+E+L RR M
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEY 142
Query: 298 ------VPLP--PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
VP F++ ++ ++A+ M+YL QK IHRDL N+ + + ++IAD
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIAD 200
Query: 350 FGHARFLSDGEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
FG AR +++ + T +MAPE + Y+ +SDV+SFG+++ EI T G PY
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +PA EL ++ W S RP+F +
Sbjct: 261 PGIPVEELFK----LLKEGHRMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 460 SLKNI 464
L I
Sbjct: 312 DLDRI 316
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W ++ L + +G+G + A G+D VAVK + D E ++
Sbjct: 17 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSD 73
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM-- 297
E++ + +H+ ++ L+GAC + +V L+E+L RR M
Sbjct: 74 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEY 129
Query: 298 ------VPLP--PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
VP F++ ++ ++A+ M+YL QK IHRDL N+ + + ++IAD
Sbjct: 130 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLTARNVLVTENNVMKIAD 187
Query: 350 FGHARFLSDGEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
FG AR +++ + T +MAPE + Y+ +SDV+SFG+++ EI T G PY
Sbjct: 188 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +PA EL ++ W S RP+F +
Sbjct: 248 PGIPVEELFK----LLKEGHRMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 298
Query: 460 SLKNI 464
L I
Sbjct: 299 DLDRI 303
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 121/272 (44%), Gaps = 48/272 (17%)
Query: 221 VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT 279
VAVK + D + + QE+D L H +++ G C + LV E +
Sbjct: 63 VAVKALKAD---AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 280 -TLKEWL--HGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSN 336
+L+++L H +G + L A +I + M YLH Q IHRDL N
Sbjct: 120 GSLRDYLPRHSIG-------------LAQLLLFAQQICEGMAYLHAQH--YIHRDLAARN 164
Query: 337 IFLDDAKHVRIADFGHARFLSDG-------EMALTGTFVYMAPEVIQCEPYSEKSDVYSF 389
+ LD+ + V+I DFG A+ + +G E + F Y APE ++ + SDV+SF
Sbjct: 165 VLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEYKFYYASDVWSF 223
Query: 390 GIILNEIITGNHPYIEKDYKPAKIAME---VGEGKLR-----------PALPEEDGQLRE 435
G+ L E++T + + P +E + +G++ LP D E
Sbjct: 224 GVTLYELLT----HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAE 279
Query: 436 LIELICLSWDGDASVRPSFSSITCSLKNIQMK 467
+ L+ W+ +AS RP+F ++ LK + K
Sbjct: 280 VYHLMKNCWETEASFRPTFENLIPILKTVHEK 311
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W ++ L + +G+G + A G+D VAVK + D E ++
Sbjct: 22 WEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSD 78
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM-- 297
E++ + +H+ ++ L+GAC + +V L+E+L RR M
Sbjct: 79 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEY 134
Query: 298 ------VPLP--PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
VP F++ ++ ++A+ M+YL QK IHRDL N+ + + ++IAD
Sbjct: 135 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIAD 192
Query: 350 FGHARFLSDGEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
FG AR +++ + T +MAPE + Y+ +SDV+SFG+++ EI T G PY
Sbjct: 193 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +PA EL ++ W S RP+F +
Sbjct: 253 PGIPVEELFK----LLKEGHRMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 303
Query: 460 SLKNI 464
L I
Sbjct: 304 DLDRI 308
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 130/295 (44%), Gaps = 39/295 (13%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIY----RAIWRG---LDVAVKCIYPDFFHTNENAV---- 238
W + ++I L ++GQG+ +Y R I +G VAVK + NE+A
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRER 64
Query: 239 TFFAQEVDTLSRQRHRFVLQLMGACL--EPPYRGWLVTELLG-TTLKEWLHGLGSQRRKE 295
F E + V++L+G +P +V EL+ LK +L L +
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL---VVMELMAHGDLKSYLRSLRPEAENN 121
Query: 296 RMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
P P +E + A EIA M YL+ +K +HRDL N + V+I DFG R
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 356 LSDGEMALTG-----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIE-KDY 408
+ + G +MAPE ++ ++ SD++SFG++L EI + PY +
Sbjct: 180 IYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
+ K M+ G L + D + +L+ + W + +RP+F I LK+
Sbjct: 240 QVLKFVMDGG------YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 137/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W ++ L + +G+G + A G+D VAVK + D E ++
Sbjct: 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD---ATEKDLSD 86
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM-- 297
E++ + +H+ ++ L+GAC + +V L+E+L RR M
Sbjct: 87 LVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRA----RRPPGMEY 142
Query: 298 ------VPLP--PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
VP F++ ++ ++A+ M+YL QK IHRDL N+ + + ++IAD
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIAD 200
Query: 350 FGHARFLSDGEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
FG AR +++ + T +MAPE + Y+ +SDV+SFG+++ EI T G PY
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +PA EL ++ W S RP+F +
Sbjct: 261 PGIPVEELFK----LLKEGHRMDKPA-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
Query: 460 SLKNI 464
L I
Sbjct: 312 DLDRI 316
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT----- 366
+++ M+YL E +HRDL N+ L + +I+DFG ++ L E
Sbjct: 119 QVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW 176
Query: 367 -FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRP 424
+ APE I +S KSDV+SFG+++ E + G PY +E GE P
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 236
Query: 425 ALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMKVT 469
A G RE+ +L+ L W D RP F+++ L+N V
Sbjct: 237 A-----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 276
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 132/295 (44%), Gaps = 39/295 (13%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIY----RAIWRG---LDVAVKCIYPDFFHTNENAV---- 238
W + ++I L ++GQG+ +Y R I +G VAVK + NE+A
Sbjct: 12 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRER 64
Query: 239 TFFAQEVDTLSRQRHRFVLQLMGACL--EPPYRGWLVTELLG-TTLKEWLHGLGSQRRKE 295
F E + V++L+G +P +V EL+ LK +L L +
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL---VVMELMAHGDLKSYLRSLRPEAENN 121
Query: 296 RMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
P P +E + A EIA M YL+ +K +HR+L N + V+I DFG R
Sbjct: 122 PGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRNLAARNCMVAHDFTVKIGDFGMTRD 179
Query: 356 LSDGEMALTG-----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIE-KDY 408
+ + + G +MAPE ++ ++ SD++SFG++L EI + PY +
Sbjct: 180 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 239
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
+ K M+ G L + D + +L+ + W + ++RP+F I LK+
Sbjct: 240 QVLKFVMDGG------YLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 199 LQEKIGQGTTANI--YRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFV 256
L + IG+G A + R I G +VAV+ I D N +++ +EV + H +
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 257 LQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
++L +E +LV E G + ++L G + KE A+ +I
Sbjct: 76 VKLF-EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR----------AKFRQIVS 124
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALTGTFVYMAPE 373
A+QY H++ ++HRDLK N+ LD +++IADFG + + G G+ Y APE
Sbjct: 125 AVQYCHQKF--IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 182
Query: 374 VIQCEPY-SEKSDVYSFGIILNEIITGNHPY 403
+ Q + Y + DV+S G+IL +++G+ P+
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT----- 366
+++ M+YL E +HRDL N+ L + +I+DFG ++ L E
Sbjct: 477 QVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
Query: 367 -FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRP 424
+ APE I +S KSDV+SFG+++ E + G PY +E GE P
Sbjct: 535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 594
Query: 425 ALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMKVT 469
A G RE+ +L+ L W D RP F+++ L+N V
Sbjct: 595 A-----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 634
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 132/295 (44%), Gaps = 39/295 (13%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIY----RAIWRG---LDVAVKCIYPDFFHTNENAV---- 238
W + ++I L ++GQG+ +Y R I +G VAVK + NE+A
Sbjct: 13 WEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRER 65
Query: 239 TFFAQEVDTLSRQRHRFVLQLMGACL--EPPYRGWLVTELLG-TTLKEWLHGLGSQRRKE 295
F E + V++L+G +P +V EL+ LK +L L +
Sbjct: 66 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL---VVMELMAHGDLKSYLRSLRPEAENN 122
Query: 296 RMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
P P +E + A EIA M YL+ +K +HR+L N + V+I DFG R
Sbjct: 123 PGRPPPTLQEMIQMAAEIADGMAYLNAKK--FVHRNLAARNCMVAHDFTVKIGDFGMTRD 180
Query: 356 LSDGEMALTG-----TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIE-KDY 408
+ + + G +MAPE ++ ++ SD++SFG++L EI + PY +
Sbjct: 181 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE 240
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
+ K M+ G L + D + +L+ + W + ++RP+F I LK+
Sbjct: 241 QVLKFVMDGG------YLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 289
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT----- 366
+++ M+YL E +HRDL N+ L + +I+DFG ++ L E
Sbjct: 478 QVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
Query: 367 -FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRP 424
+ APE I +S KSDV+SFG+++ E + G PY +E GE P
Sbjct: 536 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 595
Query: 425 ALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMKVT 469
A G RE+ +L+ L W D RP F+++ L+N V
Sbjct: 596 A-----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 635
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 36/182 (19%)
Query: 243 QEVDTLSRQRHRFVLQLMGACLE-----------PPYRGWLVTELL-GTTLKEWLHGLGS 290
+EV L++ H +++ A LE P ++ +L LK+W++G +
Sbjct: 52 REVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCT 111
Query: 291 QRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADF 350
+ER V L F L+IA+A+++LH + ++HRDLKPSNIF V++ DF
Sbjct: 112 IEERERSVCLHIF-------LQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDF 162
Query: 351 GHARFLSDGEMALT---------------GTFVYMAPEVIQCEPYSEKSDVYSFGIILNE 395
G + E T GT +YM+PE I YS K D++S G+IL E
Sbjct: 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
Query: 396 II 397
++
Sbjct: 223 LL 224
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 199 LQEKIGQGTTANI--YRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFV 256
L + IG+G A + R I G +VAVK I D N +++ +EV + H +
Sbjct: 11 LLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 257 LQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
++L +E +LV E G + ++L G + KE A+ +I
Sbjct: 69 VKLF-EVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEAR----------AKFRQIVS 117
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALTGTFVYMAPE 373
A+QY H++ ++HRDLK N+ LD +++IADFG + + G G+ Y APE
Sbjct: 118 AVQYCHQKF--IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 175
Query: 374 VIQCEPY-SEKSDVYSFGIILNEIITGNHPY 403
+ Q + Y + DV+S G+IL +++G+ P+
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 206
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT----- 366
+++ M+YL E +HRDL N+ L + +I+DFG ++ L E
Sbjct: 119 QVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 176
Query: 367 -FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRP 424
+ APE I +S KSDV+SFG+++ E + G PY +E GE P
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 236
Query: 425 ALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMKVT 469
A G RE+ +L+ L W D RP F+++ L+N V
Sbjct: 237 A-----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 276
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT----- 366
+++ M+YL E +HRDL N+ L + +I+DFG ++ L E
Sbjct: 113 QVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 170
Query: 367 -FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRP 424
+ APE I +S KSDV+SFG+++ E + G PY +E GE P
Sbjct: 171 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 230
Query: 425 ALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMKVT 469
A G RE+ +L+ L W D RP F+++ L+N V
Sbjct: 231 A-----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 270
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT----- 366
+++ M+YL E +HRDL N+ L + +I+DFG ++ L E
Sbjct: 115 QVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 172
Query: 367 -FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRP 424
+ APE I +S KSDV+SFG+++ E + G PY +E GE P
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 232
Query: 425 ALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMKVT 469
A G RE+ +L+ L W D RP F+++ L+N V
Sbjct: 233 A-----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 272
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 21/211 (9%)
Query: 199 LQEKIGQGTTANI--YRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFV 256
L + IG+G A + R I G +VAV+ I D N +++ +EV + H +
Sbjct: 18 LLKTIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 257 LQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
++L +E +LV E G + ++L G + KE A+ +I
Sbjct: 76 VKLF-EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR----------AKFRQIVS 124
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALTGTFVYMAPE 373
A+QY H++ ++HRDLK N+ LD +++IADFG + + G G+ Y APE
Sbjct: 125 AVQYCHQKF--IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPE 182
Query: 374 VIQCEPY-SEKSDVYSFGIILNEIITGNHPY 403
+ Q + Y + DV+S G+IL +++G+ P+
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT----- 366
+++ M+YL E +HRDL N+ L + +I+DFG ++ L E
Sbjct: 125 QVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
Query: 367 -FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRP 424
+ APE I +S KSDV+SFG+++ E + G PY +E GE P
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 242
Query: 425 ALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMKVT 469
A G RE+ +L+ L W D RP F+++ L+N V
Sbjct: 243 A-----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT----- 366
+++ M+YL E +HRDL N+ L + +I+DFG ++ L E
Sbjct: 133 QVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
Query: 367 -FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRP 424
+ APE I +S KSDV+SFG+++ E + G PY +E GE P
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 250
Query: 425 ALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMKVT 469
A G RE+ +L+ L W D RP F+++ L+N V
Sbjct: 251 A-----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 290
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 102/240 (42%), Gaps = 42/240 (17%)
Query: 196 EIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRF 255
+I L E +G+G ++R W+G +VAVK F + + F E+ RH
Sbjct: 9 QITLLECVGKGRYGEVWRGSWQGENVAVK-----IFSSRDEKSWFRETELYNTVMLRHEN 63
Query: 256 VLQLMGACLEPPYRG---WLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALE 312
+L + + + + WL+T H +GS ++ L L L
Sbjct: 64 ILGFIASDMTSRHSSTQLWLITH---------YHEMGSLYDYLQLTTLDTV-SCLRIVLS 113
Query: 313 IAQAMQYLH------EQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF-------LSDG 359
IA + +LH + KP + HRDLK NI + IAD G A L G
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVG 173
Query: 360 EMALTGTFVYMAPEV------IQCEPYSEKSDVYSFGIILNEI---ITGNHPYIEKDYKP 410
GT YMAPEV + C ++ D+++FG++L E+ + N I +DYKP
Sbjct: 174 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNG--IVEDYKP 231
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT----- 366
+++ M+YL E +HRDL N+ L + +I+DFG ++ L E
Sbjct: 135 QVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 367 -FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRP 424
+ APE I +S KSDV+SFG+++ E + G PY +E GE P
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 252
Query: 425 ALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMKVT 469
A G RE+ +L+ L W D RP F+++ L+N V
Sbjct: 253 A-----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 292
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 14/165 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT----- 366
+++ M+YL E +HRDL N+ L + +I+DFG ++ L E
Sbjct: 135 QVSMGMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 367 -FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRP 424
+ APE I +S KSDV+SFG+++ E + G PY +E GE P
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP 252
Query: 425 ALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMKVT 469
A G RE+ +L+ L W D RP F+++ L+N V
Sbjct: 253 A-----GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 292
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W + + L + +G+G + A GLD VAVK + D E ++
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD---ATEKDLSD 79
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVP 299
E++ + +H+ ++ L+GAC + +V L+E+L + P
Sbjct: 80 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNP 139
Query: 300 LPPFEERLAR------ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA 353
EE+L+ A ++A+ M+YL +K IHRDL N+ + + ++IADFG A
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 354 RFL---------SDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
R + ++G + + +MAPE + Y+ +SDV+SFG++L EI T G PY
Sbjct: 198 RDIHHIDXXKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +P+ EL ++ W S RP+F +
Sbjct: 254 PGVPVEELFK----LLKEGHRMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
Query: 460 SLKNI 464
L I
Sbjct: 305 DLDRI 309
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 14/131 (10%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNI-FLDDAKH---VRIADFGHARFL 356
F ER A A+ I + ++YLH Q V+HRDLKPSNI ++D++ + +RI DFG A+ L
Sbjct: 113 FSEREASAVLFTITKTVEYLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
Query: 357 SDGEMALTGTFVY----MAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEK-DYKPA 411
E L T Y +APEV++ + Y D++S G++L +TG P+ D P
Sbjct: 171 R-AENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPE 229
Query: 412 KIAMEVGEGKL 422
+I +G GK
Sbjct: 230 EILARIGSGKF 240
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W + + L + +G+G + A GLD VAVK + D E ++
Sbjct: 16 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD---ATEKDLSD 72
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVP 299
E++ + +H+ ++ L+GAC + +V L+E+L + P
Sbjct: 73 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 132
Query: 300 LPPFEERLAR------ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA 353
EE+L+ A ++A+ M+YL +K IHRDL N+ + + ++IADFG A
Sbjct: 133 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLA 190
Query: 354 RFL---------SDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
R + ++G + + +MAPE + Y+ +SDV+SFG++L EI T G PY
Sbjct: 191 RDIHHIDYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +P+ EL ++ W S RP+F +
Sbjct: 247 PGVPVEELFK----LLKEGHRMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 297
Query: 460 SLKNI 464
L I
Sbjct: 298 DLDRI 302
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W + + L + +G+G + A GLD VAVK + D E ++
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD---ATEKDLSD 79
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVP 299
E++ + +H+ ++ L+GAC + +V L+E+L + P
Sbjct: 80 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 139
Query: 300 LPPFEERLAR------ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA 353
EE+L+ A ++A+ M+YL +K IHRDL N+ + + ++IADFG A
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 354 RFL---------SDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
R + ++G + + +MAPE + Y+ +SDV+SFG++L EI T G PY
Sbjct: 198 RDIHHIDYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +P+ EL ++ W S RP+F +
Sbjct: 254 PGVPVEELFK----LLKEGHRMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
Query: 460 SLKNI 464
L I
Sbjct: 305 DLDRI 309
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W + + L + +G+G + A GLD VAVK + D E ++
Sbjct: 15 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD---ATEKDLSD 71
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVP 299
E++ + +H+ ++ L+GAC + +V L+E+L + P
Sbjct: 72 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 131
Query: 300 LPPFEERLAR------ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA 353
EE+L+ A ++A+ M+YL +K IHRDL N+ + + ++IADFG A
Sbjct: 132 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLA 189
Query: 354 RFL---------SDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
R + ++G + + +MAPE + Y+ +SDV+SFG++L EI T G PY
Sbjct: 190 RDIHHIDYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +P+ EL ++ W S RP+F +
Sbjct: 246 PGVPVEELFK----LLKEGHRMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 296
Query: 460 SLKNI 464
L I
Sbjct: 297 DLDRI 301
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 22/216 (10%)
Query: 198 DLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRH-R 254
DL E IG+G ++ + + + G +AVK I +E ++D + R
Sbjct: 26 DLGE-IGRGAYGSVNKMVHKPSGQIMAVKRIRS---TVDEKEQKQLLMDLDVVMRSSDCP 81
Query: 255 FVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLAR-ALEI 313
+++Q GA W+ EL+ T+ ++ + S + ++P EE L + L
Sbjct: 82 YIVQFYGALFREG-DCWICMELMSTSFDKFYKYVYSVL--DDVIP----EEILGKITLAT 134
Query: 314 AQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD--GEMALTGTFVYMA 371
+A+ +L E K+IHRD+KPSNI LD + ++++ DFG + L D + G YMA
Sbjct: 135 VKALNHLKENL-KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMA 193
Query: 372 PEVIQC----EPYSEKSDVYSFGIILNEIITGNHPY 403
PE I + Y +SDV+S GI L E+ TG PY
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W + + L + +G+G + A GLD VAVK + D E ++
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD---ATEKDLSD 79
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVP 299
E++ + +H+ ++ L+GAC + +V L+E+L + P
Sbjct: 80 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNP 139
Query: 300 LPPFEERLAR------ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA 353
EE+L+ A ++A+ M+YL +K IHRDL N+ + + ++IADFG A
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 354 RFL---------SDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
R + ++G + + +MAPE + Y+ +SDV+SFG++L EI T G PY
Sbjct: 198 RDIHHIDYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +P+ EL ++ W S RP+F +
Sbjct: 254 PGVPVEELFK----LLKEGHRMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
Query: 460 SLKNI 464
L I
Sbjct: 305 DLDRI 309
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W + + L + +G+G + A GLD VAVK + D E ++
Sbjct: 12 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD---ATEKDLSD 68
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVP 299
E++ + +H+ ++ L+GAC + +V L+E+L + P
Sbjct: 69 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 128
Query: 300 LPPFEERLAR------ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA 353
EE+L+ A ++A+ M+YL +K IHRDL N+ + + ++IADFG A
Sbjct: 129 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLA 186
Query: 354 RFL---------SDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
R + ++G + + +MAPE + Y+ +SDV+SFG++L EI T G PY
Sbjct: 187 RDIHHIDYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +P+ EL ++ W S RP+F +
Sbjct: 243 PGVPVEELFK----LLKEGHRMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 293
Query: 460 SLKNI 464
L I
Sbjct: 294 DLDRI 298
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 45/252 (17%)
Query: 241 FAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWL--HGLGSQRRKER 296
+ QE+D L H +++ G C + + LV E + +L+++L H +G
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIG------- 115
Query: 297 MVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL 356
+ L A +I + M YLH Q IHR+L N+ LD+ + V+I DFG A+ +
Sbjct: 116 ------LAQLLLFAQQICEGMAYLHSQH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAV 167
Query: 357 SDG-------EMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
+G E + F Y APE ++ + SDV+SFG+ L E++T + +
Sbjct: 168 PEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLT----HCDSSQS 222
Query: 410 PAKIAME---VGEGKLR-----------PALPEEDGQLRELIELICLSWDGDASVRPSFS 455
P +E + +G++ LP D E+ L+ W+ +AS RP+F
Sbjct: 223 PPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFE 282
Query: 456 SITCSLKNIQMK 467
++ LK + K
Sbjct: 283 NLIPILKTVHEK 294
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 18/165 (10%)
Query: 243 QEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP 302
+E+ L RH +++L + P +V E G L +++ K+RM
Sbjct: 58 REISYLKLLRHPHIIKLYDV-ITTPTDIVMVIEYAGGELFDYI------VEKKRMT---- 106
Query: 303 FEERLARALE-IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM 361
E+ R + I A++Y H K ++HRDLKP N+ LDD +V+IADFG + ++DG
Sbjct: 107 -EDEGRRFFQQIICAIEYCHRHK--IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF 163
Query: 362 ALT--GTFVYMAPEVIQCEPYS-EKSDVYSFGIILNEIITGNHPY 403
T G+ Y APEVI + Y+ + DV+S GI+L ++ G P+
Sbjct: 164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF 208
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W + + L + +G+G + A GLD VAVK + D E ++
Sbjct: 64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD---ATEKDLSD 120
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVP 299
E++ + +H+ ++ L+GAC + +V L+E+L + P
Sbjct: 121 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP 180
Query: 300 LPPFEERLAR------ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA 353
EE+L+ A ++A+ M+YL +K IHRDL N+ + + ++IADFG A
Sbjct: 181 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLA 238
Query: 354 RFL---------SDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
R + ++G + + +MAPE + Y+ +SDV+SFG++L EI T G PY
Sbjct: 239 RDIHHIDYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 294
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +P+ EL ++ W S RP+F +
Sbjct: 295 PGVPVEELFK----LLKEGHRMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 345
Query: 460 SLKNI 464
L I
Sbjct: 346 DLDRI 350
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 37/248 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ + F +E+ L F+++ G P + LV E L + L+++L
Sbjct: 49 HSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---- 104
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
QR + R+ L + +I + M+YL ++ +HRDL NI ++ HV+IAD
Sbjct: 105 -QRHRARLDA----SRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIAD 157
Query: 350 FGHARFLS-DGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG A+ L D + + + APE + +S +SDV+SFG++L E+ T Y
Sbjct: 158 FGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT----Y 213
Query: 404 IEKDYKP-AKIAMEVGEGKLRPA-------------LPEEDGQLRELIELICLSWDGDAS 449
+K P A+ +G + PA LP E+ EL+ L W
Sbjct: 214 CDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQ 273
Query: 450 VRPSFSSI 457
RPSFS++
Sbjct: 274 DRPSFSAL 281
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 105/213 (49%), Gaps = 26/213 (12%)
Query: 202 KIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQL 259
++G GT +++ +R G +AVK + + EN +V L +++Q
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG-NKEENKRILMDLDV-VLKSHDCPYIVQC 89
Query: 260 MGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIA--QAM 317
G + ++ EL+GT +++ K+RM P ER+ + +A +A+
Sbjct: 90 FGTFITNT-DVFIAMELMGTC---------AEKLKKRM--QGPIPERILGKMTVAIVKAL 137
Query: 318 QYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVI 375
YL E K VIHRD+KPSNI LD+ +++ DFG + L D + G YMAPE I
Sbjct: 138 YYLKE-KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERI 196
Query: 376 Q----CEP-YSEKSDVYSFGIILNEIITGNHPY 403
+P Y ++DV+S GI L E+ TG PY
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQFPY 229
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 115/243 (47%), Gaps = 32/243 (13%)
Query: 193 DPKE-IDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLS 249
DP+ +D KIG+G+T + A R G VAVK + D + F EV +
Sbjct: 148 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLF--NEVVIMR 203
Query: 250 RQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG--LGSQRRKERMVPLPPFEERL 307
+H V+++ Y +LV + L + E+L G L RM EE++
Sbjct: 204 DYQHENVVEM--------YNSYLVGDELWVVM-EFLEGGALTDIVTHTRM-----NEEQI 249
Query: 308 ARA-LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG---EMAL 363
A L + QA+ LH Q VIHRD+K +I L V+++DFG +S L
Sbjct: 250 AAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 307
Query: 364 TGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLR 423
GT +MAPE+I PY + D++S GI++ E++ G PY +P AM++ L
Sbjct: 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN---EPPLKAMKMIRDNLP 364
Query: 424 PAL 426
P L
Sbjct: 365 PRL 367
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 115/252 (45%), Gaps = 45/252 (17%)
Query: 241 FAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWL--HGLGSQRRKER 296
+ QE+D L H +++ G C + + LV E + +L+++L H +G
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIG------- 115
Query: 297 MVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL 356
+ L A +I + M YLH Q IHR+L N+ LD+ + V+I DFG A+ +
Sbjct: 116 ------LAQLLLFAQQICEGMAYLHAQH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAV 167
Query: 357 SDG-------EMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
+G E + F Y APE ++ + SDV+SFG+ L E++T + +
Sbjct: 168 PEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLT----HCDSSQS 222
Query: 410 PAKIAME---VGEGKLR-----------PALPEEDGQLRELIELICLSWDGDASVRPSFS 455
P +E + +G++ LP D E+ L+ W+ +AS RP+F
Sbjct: 223 PPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFE 282
Query: 456 SITCSLKNIQMK 467
++ LK + K
Sbjct: 283 NLIPILKTVHEK 294
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 108/233 (46%), Gaps = 59/233 (25%)
Query: 203 IGQGTTANIYRAIWRGLD---VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQL 259
+GQG + +A LD A+K I HT E T + EV L+ H++V++
Sbjct: 14 LGQGAFGQVVKA-RNALDSRYYAIKKIR----HTEEKLSTILS-EVMLLASLNHQYVVRY 67
Query: 260 MGACLEPPYRGWLVTELLGT----------------TLKEWLHGLG-SQRRKERMVPLPP 302
A LE R V + TL + +H +Q+R E
Sbjct: 68 YAAWLE---RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----- 119
Query: 303 FEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL------ 356
RL R +I +A+ Y+H Q +IHRDLKP NIF+D++++V+I DFG A+ +
Sbjct: 120 ---RLFR--QILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 357 -----------SDGEMALTGTFVYMAPEVIQ-CEPYSEKSDVYSFGIILNEII 397
SD + GT +Y+A EV+ Y+EK D+YS GII E+I
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 115/243 (47%), Gaps = 32/243 (13%)
Query: 193 DPKE-IDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLS 249
DP+ +D KIG+G+T + A R G VAVK + D + F EV +
Sbjct: 26 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLF--NEVVIMR 81
Query: 250 RQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG--LGSQRRKERMVPLPPFEERL 307
+H V+++ Y +LV + L + E+L G L RM EE++
Sbjct: 82 DYQHENVVEM--------YNSYLVGDELWVVM-EFLEGGALTDIVTHTRM-----NEEQI 127
Query: 308 ARA-LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG---EMAL 363
A L + QA+ LH Q VIHRD+K +I L V+++DFG +S L
Sbjct: 128 AAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 185
Query: 364 TGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLR 423
GT +MAPE+I PY + D++S GI++ E++ G PY +P AM++ L
Sbjct: 186 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN---EPPLKAMKMIRDNLP 242
Query: 424 PAL 426
P L
Sbjct: 243 PRL 245
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 129/294 (43%), Gaps = 23/294 (7%)
Query: 184 QAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWR-----GLDVAVKCIYPDFFHTNENAV 238
Q K+ ID + L + +G+G ++ + L VAVK + D ++++ +
Sbjct: 23 QNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLD--NSSQREI 80
Query: 239 TFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEW-LHGLGSQRRKERM 297
F E + H V++L+G C+E +G ++ +K LH R E
Sbjct: 81 EEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETG 140
Query: 298 VPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS 357
P + L ++IA M+YL + +HRDL N L D V +ADFG ++ +
Sbjct: 141 PKHIPLQTLLKFMVDIALGMEYLSNRN--FLHRDLAARNCMLRDDMTVCVADFGLSKKIY 198
Query: 358 DGEMALTGTFVYMAPEVIQCEP-----YSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPA 411
G+ G M + I E Y+ KSDV++FG+ + EI T G PY P
Sbjct: 199 SGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY------PG 252
Query: 412 KIAMEVGEGKLRP-ALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
E+ + L L + + L EL E++ W D RP+FS + L+ +
Sbjct: 253 VQNHEMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 115/243 (47%), Gaps = 32/243 (13%)
Query: 193 DPKE-IDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLS 249
DP+ +D KIG+G+T + A R G VAVK + D + F EV +
Sbjct: 28 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLF--NEVVIMR 83
Query: 250 RQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG--LGSQRRKERMVPLPPFEERL 307
+H V+++ Y +LV + L + E+L G L RM EE++
Sbjct: 84 DYQHENVVEM--------YNSYLVGDELWVVM-EFLEGGALTDIVTHTRM-----NEEQI 129
Query: 308 ARA-LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG---EMAL 363
A L + QA+ LH Q VIHRD+K +I L V+++DFG +S L
Sbjct: 130 AAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 187
Query: 364 TGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLR 423
GT +MAPE+I PY + D++S GI++ E++ G PY +P AM++ L
Sbjct: 188 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN---EPPLKAMKMIRDNLP 244
Query: 424 PAL 426
P L
Sbjct: 245 PRL 247
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 108/233 (46%), Gaps = 59/233 (25%)
Query: 203 IGQGTTANIYRAIWRGLD---VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQL 259
+GQG + +A LD A+K I HT E T + EV L+ H++V++
Sbjct: 14 LGQGAFGQVVKA-RNALDSRYYAIKKIR----HTEEKLSTILS-EVMLLASLNHQYVVRY 67
Query: 260 MGACLEPPYRGWLVTELLGT----------------TLKEWLHGLG-SQRRKERMVPLPP 302
A LE R V + TL + +H +Q+R E
Sbjct: 68 YAAWLE---RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----- 119
Query: 303 FEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL------ 356
RL R +I +A+ Y+H Q +IHRDLKP NIF+D++++V+I DFG A+ +
Sbjct: 120 ---RLFR--QILEALSYIHSQG--IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 357 -----------SDGEMALTGTFVYMAPEVIQ-CEPYSEKSDVYSFGIILNEII 397
SD + GT +Y+A EV+ Y+EK D+YS GII E+I
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ADFG A+ +
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 196
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 254
Query: 421 KLR 423
K+R
Sbjct: 255 KVR 257
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ADFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ADFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ADFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 115/243 (47%), Gaps = 32/243 (13%)
Query: 193 DPKE-IDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLS 249
DP+ +D KIG+G+T + A R G VAVK + D + F EV +
Sbjct: 21 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLF--NEVVIMR 76
Query: 250 RQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG--LGSQRRKERMVPLPPFEERL 307
+H V+++ Y +LV + L + E+L G L RM EE++
Sbjct: 77 DYQHENVVEM--------YNSYLVGDELWVVM-EFLEGGALTDIVTHTRM-----NEEQI 122
Query: 308 ARA-LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG---EMAL 363
A L + QA+ LH Q VIHRD+K +I L V+++DFG +S L
Sbjct: 123 AAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 180
Query: 364 TGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLR 423
GT +MAPE+I PY + D++S GI++ E++ G PY +P AM++ L
Sbjct: 181 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN---EPPLKAMKMIRDNLP 237
Query: 424 PAL 426
P L
Sbjct: 238 PRL 240
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 128/288 (44%), Gaps = 35/288 (12%)
Query: 195 KEIDLQEKIGQGTTANIY----RAIWRG---LDVAVKCIYPDFFHTNENAV----TFFAQ 243
++I L ++GQG+ +Y R I +G VAVK + NE+A F
Sbjct: 16 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV-------NESASLRERIEFLN 68
Query: 244 EVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLG-TTLKEWLHGLGSQRRKERMVPLPP 302
E + V++L+G + +V EL+ LK +L L + P P
Sbjct: 69 EASVMKGFTCHHVVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT 127
Query: 303 FEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA 362
+E + A EIA M YL+ +K +HRDL N + V+I DFG R + + +
Sbjct: 128 LQEMIQMAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 185
Query: 363 LTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIE-KDYKPAKIAM 415
G +MAPE ++ ++ SD++SFG++L EI + PY + + K M
Sbjct: 186 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 245
Query: 416 EVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKN 463
+ G L + D + +L+ + W + +RP+F I LK+
Sbjct: 246 DGG------YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 287
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 115/243 (47%), Gaps = 32/243 (13%)
Query: 193 DPKE-IDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLS 249
DP+ +D KIG+G+T + A R G VAVK + D + F EV +
Sbjct: 71 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLF--NEVVIMR 126
Query: 250 RQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG--LGSQRRKERMVPLPPFEERL 307
+H V+++ Y +LV + L + E+L G L RM EE++
Sbjct: 127 DYQHENVVEM--------YNSYLVGDELWVVM-EFLEGGALTDIVTHTRM-----NEEQI 172
Query: 308 ARA-LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG---EMAL 363
A L + QA+ LH Q VIHRD+K +I L V+++DFG +S L
Sbjct: 173 AAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 230
Query: 364 TGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLR 423
GT +MAPE+I PY + D++S GI++ E++ G PY +P AM++ L
Sbjct: 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN---EPPLKAMKMIRDNLP 287
Query: 424 PAL 426
P L
Sbjct: 288 PRL 290
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 115/243 (47%), Gaps = 32/243 (13%)
Query: 193 DPKE-IDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLS 249
DP+ +D KIG+G+T + A R G VAVK + D + F EV +
Sbjct: 17 DPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM--DLRKQQRRELLF--NEVVIMR 72
Query: 250 RQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG--LGSQRRKERMVPLPPFEERL 307
+H V+++ Y +LV + L + E+L G L RM EE++
Sbjct: 73 DYQHENVVEM--------YNSYLVGDELWVVM-EFLEGGALTDIVTHTRM-----NEEQI 118
Query: 308 ARA-LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG---EMAL 363
A L + QA+ LH Q VIHRD+K +I L V+++DFG +S L
Sbjct: 119 AAVCLAVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 176
Query: 364 TGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLR 423
GT +MAPE+I PY + D++S GI++ E++ G PY +P AM++ L
Sbjct: 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFN---EPPLKAMKMIRDNLP 233
Query: 424 PAL 426
P L
Sbjct: 234 PRL 236
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 31/221 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRGLD--VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQR 252
++ DL IG+G+ A + + D A+K + + + +E+ +D + ++
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDED--------IDWVQTEK 71
Query: 253 HRF-------VLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEE 305
H F L + +C + R + V E +++G +R LP
Sbjct: 72 HVFEQASNHPFLVGLHSCFQTESRLFFVIE--------YVNGGDLMFHMQRQRKLPEEHA 123
Query: 306 RLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR---FLSDGEMA 362
R A EI+ A+ YLHE+ +I+RDLK N+ LD H+++ D+G + D
Sbjct: 124 RFYSA-EISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSX 180
Query: 363 LTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
GT Y+APE+++ E Y D ++ G+++ E++ G P+
Sbjct: 181 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 159 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGAT 216
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 217 WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 274
Query: 421 KLR 423
K+R
Sbjct: 275 KVR 277
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 77/136 (56%), Gaps = 12/136 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--ALTGTFVYM 370
+ +A+ +LH ++HRDLKP NI LDD +R++DFG + L GE L GT Y+
Sbjct: 209 LLEAVSFLHANN--IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYL 266
Query: 371 APEVIQCE------PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRP 424
APE+++C Y ++ D+++ G+IL ++ G+ P+ + + + + EG+ +
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR--RQILMLRMIMEGQYQF 324
Query: 425 ALPEEDGQLRELIELI 440
+ PE D + + +LI
Sbjct: 325 SSPEWDDRSSTVKDLI 340
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 90/169 (53%), Gaps = 17/169 (10%)
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT 366
++ A +I+Q MQYL E K ++HRDL NI + + + ++I+DFG +R + + + + +
Sbjct: 153 ISFAWQISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 367 -----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKI--AMEVG 418
+MA E + Y+ +SDV+SFG++L EI+T G +PY P ++ ++ G
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY--PGIPPERLFNLLKTG 268
Query: 419 EGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMK 467
RP D E+ L+ W + RP F+ I+ L+ + +K
Sbjct: 269 HRMERP-----DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W + + L + +G+G + A GLD VAVK + D E ++
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD---ATEKDLSD 79
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVP 299
E++ + +H+ ++ L+GAC + +V L+E+L + P
Sbjct: 80 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNP 139
Query: 300 LPPFEERLAR------ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA 353
EE+L+ A ++A+ M+YL +K IHRDL N+ + + ++IADFG A
Sbjct: 140 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 354 RFL---------SDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
R + ++G + + +MAPE + Y+ +SDV+SFG++L EI T G PY
Sbjct: 198 RDIHHIDYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +P+ EL ++ W S RP+F +
Sbjct: 254 PGVPVEELFK----LLKEGHRMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
Query: 460 SLKNI 464
L I
Sbjct: 305 DLDRI 309
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 48/305 (15%)
Query: 190 WYIDPKEIDLQEKIGQGTTANIYRAIWRGLD---------VAVKCIYPDFFHTNENAVTF 240
W + + L + +G+G + A GLD VAVK + D E ++
Sbjct: 8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD---ATEKDLSD 64
Query: 241 FAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVP 299
E++ + +H+ ++ L+GAC + +V L+E+L + P
Sbjct: 65 LISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNP 124
Query: 300 LPPFEERLAR------ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA 353
EE+L+ A ++A+ M+YL +K IHRDL N+ + + ++IADFG A
Sbjct: 125 SHNPEEQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLA 182
Query: 354 RFL---------SDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY 403
R + ++G + + +MAPE + Y+ +SDV+SFG++L EI T G PY
Sbjct: 183 RDIHHIDYYKKTTNGRLPVK----WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
Query: 404 ----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITC 459
+E+ +K ++ G +P+ EL ++ W S RP+F +
Sbjct: 239 PGVPVEELFK----LLKEGHRMDKPS-----NCTNELYMMMRDCWHAVPSQRPTFKQLVE 289
Query: 460 SLKNI 464
L I
Sbjct: 290 DLDRI 294
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 37/248 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ + F +E+ L F+++ G P + LV E L + L+++L
Sbjct: 50 HSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---- 105
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
QR + R+ L + +I + M+YL ++ +HRDL NI ++ HV+IAD
Sbjct: 106 -QRHRARLDA----SRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIAD 158
Query: 350 FGHARFLS-DGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG A+ L D + + + APE + +S +SDV+SFG++L E+ T Y
Sbjct: 159 FGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT----Y 214
Query: 404 IEKDYKP-AKIAMEVGEGKLRPA-------------LPEEDGQLRELIELICLSWDGDAS 449
+K P A+ +G + PA LP E+ EL+ L W
Sbjct: 215 CDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQ 274
Query: 450 VRPSFSSI 457
RPSFS++
Sbjct: 275 DRPSFSAL 282
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 112/248 (45%), Gaps = 37/248 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTELLGT-TLKEWLHGLG 289
H+ + F +E+ L F+++ G P + LV E L + L+++L
Sbjct: 62 HSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---- 117
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
QR + R+ L + +I + M+YL ++ +HRDL NI ++ HV+IAD
Sbjct: 118 -QRHRARLDA----SRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIAD 170
Query: 350 FGHARFLS-DGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG A+ L D + + + APE + +S +SDV+SFG++L E+ T Y
Sbjct: 171 FGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT----Y 226
Query: 404 IEKDYKP-AKIAMEVGEGKLRPA-------------LPEEDGQLRELIELICLSWDGDAS 449
+K P A+ +G + PA LP E+ EL+ L W
Sbjct: 227 CDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQ 286
Query: 450 VRPSFSSI 457
RPSFS++
Sbjct: 287 DRPSFSAL 294
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 132/278 (47%), Gaps = 31/278 (11%)
Query: 192 IDPKEI-DLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
+DP E+ ++ ++G G +Y+A + G A K I +E + + E++ L
Sbjct: 15 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIET----KSEEELEDYIVEIEIL 70
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
+ H ++++L+GA + W++ E G + + L +R + P +
Sbjct: 71 ATCDHPYIVKLLGAYYHDG-KLWIMIEFCPGGAVDAIMLEL------DRGLTEPQIQVVC 123
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG-HARFLSDGEM--ALT 364
+ LE A+ +LH ++ +IHRDLK N+ + +R+ADFG A+ L + +
Sbjct: 124 RQMLE---ALNFLHSKR--IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI 178
Query: 365 GTFVYMAPEVIQCE-----PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGE 419
GT +MAPEV+ CE PY K+D++S GI L E+ P+ E P ++ +++ +
Sbjct: 179 GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE--LNPMRVLLKIAK 236
Query: 420 GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
P L E + + ++ D + RPS + +
Sbjct: 237 SD-PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQL 273
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 106/221 (47%), Gaps = 31/221 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRGLD--VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQR 252
++ DL IG+G+ A + + D A++ + + + +E+ +D + ++
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDED--------IDWVQTEK 103
Query: 253 HRF-------VLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEE 305
H F L + +C + R + V E +++G +R LP
Sbjct: 104 HVFEQASNHPFLVGLHSCFQTESRLFFVIE--------YVNGGDLMFHMQRQRKLPEEHA 155
Query: 306 RLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDGEMALT 364
R A EI+ A+ YLHE+ +I+RDLK N+ LD H+++ D+G + L G+ T
Sbjct: 156 RFYSA-EISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST 212
Query: 365 --GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
GT Y+APE+++ E Y D ++ G+++ E++ G P+
Sbjct: 213 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 37/234 (15%)
Query: 253 HRFVLQLMGAC-LEPPYRGWLVTELLGTTLKEWLHGLGSQRRK----------------E 295
H ++ L+GAC L P +L+ E + L+ L S+R K E
Sbjct: 108 HENIVNLLGACTLSGPI--YLIFEY--CCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 296 RMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR- 354
+ + FE+ L A ++A+ M++L + +HRDL N+ + K V+I DFG AR
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFL--EFKSCVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 355 FLSDGEMALTGT----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY--IEKD 407
+SD + G +MAPE + Y+ KSDV+S+GI+L EI + G +PY I D
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 281
Query: 408 YKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSL 461
K+ ++ G +P E E+ ++ W D+ RPSF ++T L
Sbjct: 282 ANFYKL-IQNGFKMDQPFYATE-----EIYIIMQSCWAFDSRKRPSFPNLTSFL 329
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 132/278 (47%), Gaps = 31/278 (11%)
Query: 192 IDPKEI-DLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
+DP E+ ++ ++G G +Y+A + G A K I +E + + E++ L
Sbjct: 7 LDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIET----KSEEELEDYIVEIEIL 62
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
+ H ++++L+GA + W++ E G + + L +R + P +
Sbjct: 63 ATCDHPYIVKLLGAYYHDG-KLWIMIEFCPGGAVDAIMLEL------DRGLTEPQIQVVC 115
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG-HARFLSDGEM--ALT 364
+ LE A+ +LH ++ +IHRDLK N+ + +R+ADFG A+ L + +
Sbjct: 116 RQMLE---ALNFLHSKR--IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI 170
Query: 365 GTFVYMAPEVIQCE-----PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGE 419
GT +MAPEV+ CE PY K+D++S GI L E+ P+ E P ++ +++ +
Sbjct: 171 GTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE--LNPMRVLLKIAK 228
Query: 420 GKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
P L E + + ++ D + RPS + +
Sbjct: 229 SD-PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQL 265
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 19/216 (8%)
Query: 189 GWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
G +D + EKIG+GT +Y+A + G VA+K I D E + +E+
Sbjct: 1 GPLVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREIS 58
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER 306
L H +++L+ + + +LV E L LK+++ +PLP +
Sbjct: 59 LLKELNHPNIVKLLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSY 112
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG- 365
L ++ Q + + H + V+HRDLKP N+ ++ +++ADFG AR T
Sbjct: 113 L---FQLLQGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 167
Query: 366 --TFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIIT 398
T Y APE+ + C+ YS D++S G I E++T
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 90/169 (53%), Gaps = 17/169 (10%)
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT 366
++ A +I+Q MQYL E K ++HRDL NI + + + ++I+DFG +R + + + + +
Sbjct: 153 ISFAWQISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRS 210
Query: 367 -----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKI--AMEVG 418
+MA E + Y+ +SDV+SFG++L EI+T G +PY P ++ ++ G
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY--PGIPPERLFNLLKTG 268
Query: 419 EGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMK 467
RP D E+ L+ W + RP F+ I+ L+ + +K
Sbjct: 269 HRMERP-----DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 110/234 (47%), Gaps = 35/234 (14%)
Query: 202 KIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQL 259
KIG+G+T + A + G VAVK + D + F EV + H V+ +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKM--DLRKQQRRELLF--NEVVIMRDYHHDNVVDM 107
Query: 260 MGACLEPPYRGWLVTELLGTTLKEWLHG--LGSQRRKERMVPLPPFEERLARA-LEIAQA 316
Y +LV + L + E+L G L RM EE++A L + +A
Sbjct: 108 --------YSSYLVGDELWVVM-EFLEGGALTDIVTHTRM-----NEEQIATVCLSVLRA 153
Query: 317 MQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD---GEMALTGTFVYMAPE 373
+ YLH Q VIHRD+K +I L ++++DFG +S L GT +MAPE
Sbjct: 154 LSYLHNQG--VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPE 211
Query: 374 VIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALP 427
VI PY + D++S GI++ E+I G PY +P AM ++R +LP
Sbjct: 212 VISRLPYGTEVDIWSLGIMVIEMIDGEPPYFN---EPPLQAMR----RIRDSLP 258
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 31/221 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRGLD--VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQR 252
++ DL IG+G+ A + + D A+K + + + +E ++D + ++
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDE--------DIDWVQTEK 56
Query: 253 HRF-------VLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEE 305
H F L + +C + R + V E +++G +R LP
Sbjct: 57 HVFEQASNHPFLVGLHSCFQTESRLFFVIE--------YVNGGDLMFHMQRQRKLPEEHA 108
Query: 306 RLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR---FLSDGEMA 362
R A EI+ A+ YLHE+ +I+RDLK N+ LD H+++ D+G + D
Sbjct: 109 RFYSA-EISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSX 165
Query: 363 LTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
GT Y+APE+++ E Y D ++ G+++ E++ G P+
Sbjct: 166 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D+ ++++ DFG A+ +
Sbjct: 125 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT 182
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 183 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 240
Query: 421 KLR 423
K+R
Sbjct: 241 KVR 243
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 106/227 (46%), Gaps = 34/227 (14%)
Query: 192 IDP---KEIDLQEKIGQGTTANIYRAIWRGLD--VAVKCIYPDFFHTNENAVTFFAQEVD 246
+DP ++ DL IG+G+ A + + D A+K + + + +E ++D
Sbjct: 3 MDPLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDE--------DID 54
Query: 247 TLSRQRHRF-------VLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVP 299
+ ++H F L + +C + R + V E +++G +R
Sbjct: 55 WVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE--------YVNGGDLMFHMQRQRK 106
Query: 300 LPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR---FL 356
LP R A EI+ A+ YLHE+ +I+RDLK N+ LD H+++ D+G +
Sbjct: 107 LPEEHARFYSA-EISLALNYLHERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163
Query: 357 SDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
D GT Y+APE+++ E Y D ++ G+++ E++ G P+
Sbjct: 164 GDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 110/248 (44%), Gaps = 37/248 (14%)
Query: 232 HTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEP--PYRGWLVTELLGTTLKEWLHGLG 289
H+ + F +E+ L F+++ G P P ++ L L+++L
Sbjct: 46 HSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL---- 101
Query: 290 SQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIAD 349
QR + R+ L + +I + M+YL ++ +HRDL NI ++ HV+IAD
Sbjct: 102 -QRHRARLDA----SRLLLYSSQICKGMEYLGSRR--CVHRDLAARNILVESEAHVKIAD 154
Query: 350 FGHARFLS-DGEMALT-----GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG A+ L D + + + APE + +S +SDV+SFG++L E+ T Y
Sbjct: 155 FGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT----Y 210
Query: 404 IEKDYKP-AKIAMEVGEGKLRPA-------------LPEEDGQLRELIELICLSWDGDAS 449
+K P A+ +G + PA LP E+ EL+ L W
Sbjct: 211 CDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQ 270
Query: 450 VRPSFSSI 457
RPSFS++
Sbjct: 271 DRPSFSAL 278
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 76/130 (58%), Gaps = 12/130 (9%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNI-FLDDAKH---VRIADFGHARFL 356
F ER A + I + ++YLH Q V+HRDLKPSNI ++D++ + +RI DFG A+ L
Sbjct: 118 FSEREASFVLHTIGKTVEYLHSQG--VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
Query: 357 -SDGEMALTGTFV--YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIE-KDYKPAK 412
++ + +T + ++APEV++ + Y E D++S GI+L ++ G P+ P +
Sbjct: 176 RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEE 235
Query: 413 IAMEVGEGKL 422
I +G GK
Sbjct: 236 ILTRIGSGKF 245
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 105/209 (50%), Gaps = 23/209 (11%)
Query: 203 IGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENA-VTFFAQEVDTLSRQRHRFVLQL 259
+G+G+ + A + G AVK + D +++ T + + +L+R H F+ QL
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN-HPFLTQL 89
Query: 260 MGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLAR--ALEIAQAM 317
C + P R + V E + + + + RR F+E AR A EI A+
Sbjct: 90 F-CCFQTPDRLFFVMEFVNGG--DLMFHIQKSRR---------FDEARARFYAAEIISAL 137
Query: 318 QYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDGEMALT--GTFVYMAPEV 374
+LH++ +I+RDLK N+ LD H ++ADFG + + +G T GT Y+APE+
Sbjct: 138 MFLHDKG--IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEI 195
Query: 375 IQCEPYSEKSDVYSFGIILNEIITGNHPY 403
+Q Y D ++ G++L E++ G+ P+
Sbjct: 196 LQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 203 IGQGTTANIYRA--IWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G+G+ A +YRA I GL+VA+K I + V EV + +H +L+L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY-KAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 261 GACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL--EIAQAMQ 318
+ Y +LV E+ G ++ K R + PF E AR +I M
Sbjct: 78 NYFEDSNYV-YLVLEMCHN-------GEMNRYLKNR---VKPFSENEARHFMHQIITGML 126
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS---DGEMALTGTFVYMAPEVI 375
YLH ++HRDL SN+ L +++IADFG A L + L GT Y++PE+
Sbjct: 127 YLHSHG--ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIA 184
Query: 376 QCEPYSEKSDVYSFGIILNEIITGNHPY 403
+ +SDV+S G + ++ G P+
Sbjct: 185 TRSAHGLESDVWSLGCMFYTLLIGRPPF 212
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 67
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 68 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 118
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T T Y APE+
Sbjct: 119 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 176
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 66
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 67 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLS 117
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T T Y APE+
Sbjct: 118 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 66
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 67 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 117
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T T Y APE+
Sbjct: 118 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 132/289 (45%), Gaps = 44/289 (15%)
Query: 195 KEIDLQEK--IGQGTTANIYRAIW------RGLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
KE +L++ +G G +Y+ IW + VA+K + +T+ A E
Sbjct: 15 KETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRE---NTSPKANKEILDEAY 71
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLP 301
++ +V +L+G CL + LVT+L+ G L +E LGSQ
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQ--LVTQLMPYGCLLDHVRENRGRLGSQ---------- 119
Query: 302 PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDG 359
+ L ++IA+ M YL + + ++HRDL N+ + HV+I DFG AR L +
Sbjct: 120 ---DLLNWCMQIAKGMSYLEDVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 174
Query: 360 EMALTGTFV---YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAM 415
E G V +MA E I ++ +SDV+S+G+ + E++T G PY D PA+
Sbjct: 175 EYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPY---DGIPAREIP 231
Query: 416 EVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ E R LP+ ++ ++ W D+ RP F + +
Sbjct: 232 DLLEKGER--LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRM 278
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 15/140 (10%)
Query: 271 WLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLAR-ALEIAQAMQYLHEQKPKVIH 329
W+ EL+ T+L ++ + K + +P E+ L + A+ I +A+++LH K VIH
Sbjct: 126 WICMELMDTSLDKFYKQVID---KGQTIP----EDILGKIAVSIVKALEHLHS-KLSVIH 177
Query: 330 RDLKPSNIFLDDAKHVRIADFGHARFLSD--GEMALTGTFVYMAPEVIQCE----PYSEK 383
RD+KPSN+ ++ V++ DFG + +L D + G YMAPE I E YS K
Sbjct: 178 RDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVK 237
Query: 384 SDVYSFGIILNEIITGNHPY 403
SD++S GI + E+ PY
Sbjct: 238 SDIWSLGITMIELAILRFPY 257
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 90 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 134
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 135 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 192
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 247
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 248 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 128/292 (43%), Gaps = 41/292 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRGL-------DVAVKCIYPDFFHTNENAVTFFAQEVDT 247
I+ IG+G +++A GL VAVK + + + + F +E
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE---ASADMQADFQREAAL 103
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQR-----------RKER 296
++ + +++L+G C L + L E+L + R
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 297 MVPLPP---FEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA 353
P PP E+L A ++A M YL E+K +HRDL N + + V+IADFG +
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYLSERK--FVHRDLATRNCLVGENMVVKIADFGLS 221
Query: 354 R-------FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIE 405
R + +DG A+ +M PE I Y+ +SDV+++G++L EI + G PY
Sbjct: 222 RNIYSADYYKADGNDAIP--IRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279
Query: 406 KDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSI 457
++ ++ V +G + A PE EL L+ L W + RPSF SI
Sbjct: 280 MAHE--EVIYYVRDGNIL-ACPENCPL--ELYNLMRLCWSKLPADRPSFCSI 326
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 83 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 127
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 128 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 240
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 76/130 (58%), Gaps = 12/130 (9%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNI-FLDDAKH---VRIADFGHARFL 356
F ER A + I + ++YLH Q V+HRDLKPSNI ++D++ + +RI DFG A+ L
Sbjct: 118 FSEREASFVLHTIGKTVEYLHSQG--VVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
Query: 357 -SDGEMALTGTFV--YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEK-DYKPAK 412
++ + +T + ++APEV++ + Y E D++S GI+L ++ G P+ P +
Sbjct: 176 RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEE 235
Query: 413 IAMEVGEGKL 422
I +G GK
Sbjct: 236 ILTRIGSGKF 245
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 65
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 66 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 116
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T T Y APE+
Sbjct: 117 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDG 359
F E AR EI A+ YLH +K V++RDLK N+ LD H++I DFG + + DG
Sbjct: 245 FSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303
Query: 360 EMALT--GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
T GT Y+APEV++ Y D + G+++ E++ G P+ +D++
Sbjct: 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 355
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 66
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 67 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 117
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T T Y APE+
Sbjct: 118 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 73
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 74 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 124
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T T Y APE+
Sbjct: 125 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 182
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 65
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 66 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 116
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T T Y APE+
Sbjct: 117 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 24/174 (13%)
Query: 303 FEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-------F 355
E + + ++A+ M++L +K IHRDL NI L + V+I DFG AR +
Sbjct: 192 LEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 356 LSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY----IEKDYKP 410
+ G+ L +MAPE I Y+ +SDV+SFG++L EI + G PY I++++
Sbjct: 250 VRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-- 305
Query: 411 AKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ EG A D E+ + + W G+ S RP+FS + L N+
Sbjct: 306 ---CRRLKEGTRMRA---PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 203 IGQGTTANIYRAIWR-GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMG 261
IG G +Y+ + R G VA+K P+ + + F E++TLS RH ++ L+G
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPE----SSQGIEEFETEIETLSFCRHPHLVSLIG 102
Query: 262 ACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLH 321
C E + + LK L+G S M +E+RL + A+ + YLH
Sbjct: 103 FCDERNEMILIYKYMENGNLKRHLYG--SDLPTMSM----SWEQRLEICIGAARGLHYLH 156
Query: 322 EQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD-GEMALT----GTFVYMAPEVIQ 376
+ +IHRD+K NI LD+ +I DFG ++ ++ G+ L GT Y+ PE
Sbjct: 157 TRA--IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFI 214
Query: 377 CEPYSEKSDVYSFGIILNEII 397
+EKSDVYSFG++L E++
Sbjct: 215 KGRLTEKSDVYSFGVVLFEVL 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 254
Query: 421 KLR 423
K+R
Sbjct: 255 KVR 257
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDG 359
F E AR EI A+ YLH +K V++RDLK N+ LD H++I DFG + + DG
Sbjct: 248 FSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 306
Query: 360 EMALT--GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
T GT Y+APEV++ Y D + G+++ E++ G P+ +D++
Sbjct: 307 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 358
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 26/205 (12%)
Query: 203 IGQGTTANIYRAIWR-GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMG 261
IG G +Y+ + R G VA+K P+ + + F E++TLS RH ++ L+G
Sbjct: 47 IGHGVFGKVYKGVLRDGAKVALKRRTPE----SSQGIEEFETEIETLSFCRHPHLVSLIG 102
Query: 262 ACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLP----PFEERLARALEIAQAM 317
C E + + LK L+G LP +E+RL + A+ +
Sbjct: 103 FCDERNEMILIYKYMENGNLKRHLYG----------SDLPTMSMSWEQRLEICIGAARGL 152
Query: 318 QYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE-----MALTGTFVYMAP 372
YLH + +IHRD+K NI LD+ +I DFG ++ ++ + + GT Y+ P
Sbjct: 153 HYLHTRA--IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDP 210
Query: 373 EVIQCEPYSEKSDVYSFGIILNEII 397
E +EKSDVYSFG++L E++
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVL 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 197 WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 254
Query: 421 KLR 423
K+R
Sbjct: 255 KVR 257
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 254
Query: 421 KLR 423
K+R
Sbjct: 255 KVR 257
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 109/223 (48%), Gaps = 28/223 (12%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQR 252
K + +E +G G + + A + G AVKCI E+++ E+ L + +
Sbjct: 22 KIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIE---NEIAVLRKIK 78
Query: 253 HRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL 311
H ++ L E P +LV +L+ G L + R+V + E+ A L
Sbjct: 79 HENIVALED-IYESPNHLYLVMQLVSGGELFD------------RIVEKGFYTEKDASTL 125
Query: 312 --EIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHARFLSDGEMALT-- 364
++ A+ YLH + ++HRDLKP N+ D+ + I+DFG ++ G++ T
Sbjct: 126 IRQVLDAVYYLH--RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTAC 183
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKD 407
GT Y+APEV+ +PYS+ D +S G+I ++ G P+ +++
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN 226
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ + P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADE--PIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 24/174 (13%)
Query: 303 FEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-------F 355
E + + ++A+ M++L +K IHRDL NI L + V+I DFG AR +
Sbjct: 190 LEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 356 LSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY----IEKDYKP 410
+ G+ L +MAPE I Y+ +SDV+SFG++L EI + G PY I++++
Sbjct: 248 VRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-- 303
Query: 411 AKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ EG A D E+ + + W G+ S RP+FS + L N+
Sbjct: 304 ---CRRLKEGTRMRA---PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 24/174 (13%)
Query: 303 FEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-------F 355
E + + ++A+ M++L +K IHRDL NI L + V+I DFG AR +
Sbjct: 199 LEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 356 LSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY----IEKDYKP 410
+ G+ L +MAPE I Y+ +SDV+SFG++L EI + G PY I++++
Sbjct: 257 VRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-- 312
Query: 411 AKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ EG A D E+ + + W G+ S RP+FS + L N+
Sbjct: 313 ---CRRLKEGTRMRA---PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 254
Query: 421 KLR 423
K+R
Sbjct: 255 KVR 257
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 124 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 181
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 182 WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 239
Query: 421 KLR 423
K+R
Sbjct: 240 KVR 242
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 24/174 (13%)
Query: 303 FEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-------F 355
E + + ++A+ M++L +K IHRDL NI L + V+I DFG AR +
Sbjct: 197 LEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 356 LSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY----IEKDYKP 410
+ G+ L +MAPE I Y+ +SDV+SFG++L EI + G PY I++++
Sbjct: 255 VRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF-- 310
Query: 411 AKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ EG A D E+ + + W G+ S RP+FS + L N+
Sbjct: 311 ---CRRLKEGTRMRA---PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 69
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 70 LLD-VIHTENKLYLVFEFLSMDLKDFMDASALTG-----IPLPLIKSYL---FQLLQGLA 120
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 121 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 254
Query: 421 KLR 423
K+R
Sbjct: 255 KVR 257
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 68
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 69 LLD-VIHTENKLYLVFEFLSMDLKDFMDASALTG-----IPLPLIKSYL---FQLLQGLA 119
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 120 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 131 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 188
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 189 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 246
Query: 421 KLR 423
K+R
Sbjct: 247 KVR 249
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 159 FXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 216
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 217 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 274
Query: 421 KLR 423
K+R
Sbjct: 275 KVR 277
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 159 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 216
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 217 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 274
Query: 421 KLR 423
K+R
Sbjct: 275 KVR 277
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 139 FXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 254
Query: 421 KLR 423
K+R
Sbjct: 255 KVR 257
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 254
Query: 421 KLR 423
K+R
Sbjct: 255 KVR 257
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 254
Query: 421 KLR 423
K+R
Sbjct: 255 KVR 257
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDG--EMALTGT 366
A EIA + +L Q +I+RDLK N+ LD H++IADFG + + DG GT
Sbjct: 448 AAEIAIGLFFL--QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGT 505
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKD 407
Y+APE+I +PY + D ++FG++L E++ G P+ +D
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 546
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 254
Query: 421 KLR 423
K+R
Sbjct: 255 KVR 257
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 69
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 70 LLD-VIHTENKLYLVFEFLSMDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 120
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 121 FCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 139 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 254
Query: 421 KLR 423
K+R
Sbjct: 255 KVR 257
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 133 FXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 190
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 191 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 248
Query: 421 KLR 423
K+R
Sbjct: 249 KVR 251
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 89 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 133
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 134 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 192 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 246
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 247 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 282
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA-RFLSDGE--MALTGTFVYMA 371
Q +QYLH + VIHRDLK N+FL+D V+I DFG A + DGE L GT Y+A
Sbjct: 153 QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIA 210
Query: 372 PEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKL-RPALPEED 430
PEV+ + +S + D++S G IL ++ G P+ K I ++ E + R P
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVAS 270
Query: 431 GQLRELIELICLSWDGDASVRPSFSSI 457
+R ++ D ++RPS + +
Sbjct: 271 ALIRRMLH-------ADPTLRPSVAEL 290
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 85 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 129
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 130 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 242
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 243 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FAEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 139 FXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 197 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 254
Query: 421 KLR 423
K+R
Sbjct: 255 KVR 257
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 131 FXEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 188
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 189 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 246
Query: 421 KLR 423
K+R
Sbjct: 247 KVR 249
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 106/229 (46%), Gaps = 35/229 (15%)
Query: 193 DPKEI-DLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLS 249
DP I +L E +G GT +Y R + G A+K + D E + QE++ L
Sbjct: 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM--DVTGDEEEEIK---QEINMLK 75
Query: 250 R-QRHRFVLQLMGACLE--PPYRG---WLVTELLGT-TLKEWLHGLGSQRRKERMVPLPP 302
+ HR + GA ++ PP WLV E G ++ + + KE +
Sbjct: 76 KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY-- 133
Query: 303 FEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA 362
+ R EI + + +LH+ K VIHRD+K N+ L + V++ DFG + L D +
Sbjct: 134 ----ICR--EILRGLSHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFGVSAQL-DRTVG 184
Query: 363 LTGTFV----YMAPEVIQCE-----PYSEKSDVYSFGIILNEIITGNHP 402
TF+ +MAPEVI C+ Y KSD++S GI E+ G P
Sbjct: 185 RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 67
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 68 LLD-VIHTENKLYLVFEFLSMDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 118
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 119 FCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDGEMA--LTGT 366
A EI+ + +LH K +I+RDLK N+ LD H++IADFG + + DG GT
Sbjct: 126 AAEISIGLFFLH--KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGT 183
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKD 407
Y+APE+I +PY + D +++G++L E++ G P+ +D
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED 224
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 20/207 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EK+G GT A +Y+ + + G+ VA+K + D + E + +E+ + +H +++
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLD---SEEGTPSTAIREISLMKELKHENIVR 67
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHG--LGSQRRKERMVPLPPFEERLARALEIAQA 316
L + + LV E + LK+++ +G+ R + + F+ +L Q
Sbjct: 68 LYD-VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL------QG 120
Query: 317 MQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAPE 373
+ + HE K ++HRDLKP N+ ++ +++ DFG AR + T Y AP+
Sbjct: 121 LAFCHENK--ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPD 178
Query: 374 VIQ-CEPYSEKSDVYSFGIILNEIITG 399
V+ YS D++S G IL E+ITG
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITG 205
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 86 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 130
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 131 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 243
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 244 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 24/173 (13%)
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-------FL 356
E+ ++ + ++A+ M++L +K IHRDL NI L + V+I DFG AR ++
Sbjct: 199 EDLISYSFQVARGMEFLSSRK--CIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYV 256
Query: 357 SDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY----IEKDYKPA 411
G+ L +MAPE I + YS KSDV+S+G++L EI + G PY +++D+
Sbjct: 257 RKGDTRLP--LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDF--- 311
Query: 412 KIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ EG +R PE E+ +++ W D RP F+ + L ++
Sbjct: 312 --CSRLREG-MRMRAPEYSTP--EIYQIMLDCWHRDPKERPRFAELVEKLGDL 359
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 83 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 127
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 128 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 240
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 89/169 (52%), Gaps = 17/169 (10%)
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT 366
++ A +I+Q MQYL E ++HRDL NI + + + ++I+DFG +R + + + + +
Sbjct: 153 ISFAWQISQGMQYLAEMS--LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 367 -----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKI--AMEVG 418
+MA E + Y+ +SDV+SFG++L EI+T G +PY P ++ ++ G
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY--PGIPPERLFNLLKTG 268
Query: 419 EGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMK 467
RP D E+ L+ W + RP F+ I+ L+ + +K
Sbjct: 269 HRMERP-----DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 86 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 130
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 131 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 243
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 244 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA-RFLSDGE--MALTGTFVYMA 371
Q +QYLH + VIHRDLK N+FL+D V+I DFG A + DGE L GT Y+A
Sbjct: 153 QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIA 210
Query: 372 PEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKL-RPALPEED 430
PEV+ + +S + D++S G IL ++ G P+ K I ++ E + R P
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVAS 270
Query: 431 GQLRELIELICLSWDGDASVRPSFSSI 457
+R ++ D ++RPS + +
Sbjct: 271 ALIRRMLH-------ADPTLRPSVAEL 290
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 83 LGICLTSTVQ--LITQLMPFGXLLDYVREHKDNIGSQYL-------------LNWCVQIA 127
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 128 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 240
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 139/298 (46%), Gaps = 46/298 (15%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWRG----LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+D +I Q+ IG+G + +A + +D A+K + + +++ FA E++
Sbjct: 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE---YASKDDHRDFAGELEV 78
Query: 248 LSRQRHR-FVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPF--- 303
L + H ++ L+GAC +RG+L + L L RK R++ P
Sbjct: 79 LCKLGHHPNIINLLGAC---EHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAI 131
Query: 304 ----------EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA 353
++ L A ++A+ M YL +++ IHRDL NI + + +IADFG +
Sbjct: 132 ANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYVAKIADFGLS 189
Query: 354 RFLSDGEMALTGTF-----VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKD 407
R E+ + T +MA E + Y+ SDV+S+G++L EI++ G PY
Sbjct: 190 R---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC--G 244
Query: 408 YKPAKIAMEVGEG-KLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
A++ ++ +G +L L +D E+ +L+ W RPSF+ I SL +
Sbjct: 245 MTCAELYEKLPQGYRLEKPLNCDD----EVYDLMRQCWREKPYERPSFAQILVSLNRM 298
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR--FLSDGEM-ALTGT 366
A EI +Q+LH + +++RDLK NI LD H++IADFG + L D + GT
Sbjct: 124 AAEIILGLQFLHSKG--IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGT 181
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKD 407
Y+APE++ + Y+ D +SFG++L E++ G P+ +D
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 222
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA-RFLSDGEMA--LTGTFVYMA 371
Q +QYLH + VIHRDLK N+FL+D V+I DFG A + DGE L GT Y+A
Sbjct: 137 QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIA 194
Query: 372 PEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKL-RPALPEED 430
PEV+ + +S + D++S G IL ++ G P+ K I ++ E + R P
Sbjct: 195 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVAS 254
Query: 431 GQLRELIELICLSWDGDASVRPSFSSI 457
+R ++ D ++RPS + +
Sbjct: 255 ALIRRMLH-------ADPTLRPSVAEL 274
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 80 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 124
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 125 EGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 182
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 183 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 237
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 238 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 273
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 85 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 129
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 130 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 242
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 243 PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 90 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 134
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 135 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 247
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 248 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 108 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 152
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 153 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 211 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 265
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 266 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 301
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
Query: 304 EERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM 361
EE AR L +I A+ Y H V+HRDLKP N+ LD + +IADFG + +SDGE
Sbjct: 109 EEMEARRLFQQILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166
Query: 362 ALT--GTFVYMAPEVIQCEPYS-EKSDVYSFGIILNEIITGNHPY 403
T G+ Y APEVI Y+ + D++S G+IL ++ G P+
Sbjct: 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 117 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 161
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 162 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 219
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 220 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 274
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 275 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 310
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 139/298 (46%), Gaps = 46/298 (15%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWRG----LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+D +I Q+ IG+G + +A + +D A+K + + +++ FA E++
Sbjct: 12 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE---YASKDDHRDFAGELEV 68
Query: 248 LSRQRHR-FVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPF--- 303
L + H ++ L+GAC +RG+L + L L RK R++ P
Sbjct: 69 LCKLGHHPNIINLLGAC---EHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAI 121
Query: 304 ----------EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA 353
++ L A ++A+ M YL +++ IHRDL NI + + +IADFG +
Sbjct: 122 ANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRDLAARNILVGENYVAKIADFGLS 179
Query: 354 RFLSDGEMALTGTF-----VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKD 407
R E+ + T +MA E + Y+ SDV+S+G++L EI++ G PY
Sbjct: 180 R---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC--G 234
Query: 408 YKPAKIAMEVGEG-KLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
A++ ++ +G +L L +D E+ +L+ W RPSF+ I SL +
Sbjct: 235 MTCAELYEKLPQGYRLEKPLNCDD----EVYDLMRQCWREKPYERPSFAQILVSLNRM 288
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR--FLSDGEM-ALTGT 366
A EI +Q+LH + +++RDLK NI LD H++IADFG + L D + GT
Sbjct: 125 AAEIILGLQFLHSKG--IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGT 182
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKD 407
Y+APE++ + Y+ D +SFG++L E++ G P+ +D
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 223
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 77/147 (52%), Gaps = 13/147 (8%)
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA-RFLSDGEMA--LTGTFVYMA 371
Q +QYLH + VIHRDLK N+FL+D V+I DFG A + DGE L GT Y+A
Sbjct: 153 QGVQYLHNNR--VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIA 210
Query: 372 PEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKL-RPALPEED 430
PEV+ + +S + D++S G IL ++ G P+ K I ++ E + R P
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVAS 270
Query: 431 GQLRELIELICLSWDGDASVRPSFSSI 457
+R ++ D ++RPS + +
Sbjct: 271 ALIRRMLH-------ADPTLRPSVAEL 290
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 5/101 (4%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDG--EMALTGT 366
A EIA + +L Q +I+RDLK N+ LD H++IADFG + + DG GT
Sbjct: 127 AAEIAIGLFFL--QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGT 184
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKD 407
Y+APE+I +PY + D ++FG++L E++ G P+ +D
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 225
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 77 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 121
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 122 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 180 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 234
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 235 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 129/314 (41%), Gaps = 65/314 (20%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHR 254
+ I LQE IG+G ++R WRG +VAVK F + E F E+ RH
Sbjct: 29 RTIVLQESIGKGRFGEVWRGKWRGEEVAVK-----IFSSREERSWFREAEIYQTVMLRHE 83
Query: 255 FVLQLMGACLEPPYRGWLVTELLGTTLKEWL------HGLGSQRRKERMVPLPPFEERLA 308
+L + A + GT + WL HG V + E +
Sbjct: 84 NILGFIAADNKDN----------GTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIK 130
Query: 309 RALEIAQAMQYLH------EQKPKVIHRDLKPSNIFLDDAKHVRIADFG----HARFLSD 358
AL A + +LH + KP + HRDLK NI + IAD G H
Sbjct: 131 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 190
Query: 359 GEMA---LTGTFVYMAPEVI-------QCEPYSEKSDVYSFGIILNEI-----ITGNH-- 401
++A GT YMAPEV+ E + +++D+Y+ G++ EI I G H
Sbjct: 191 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESF-KRADIYAMGLVFWEIARRCSIGGIHED 249
Query: 402 ---PYIEKDYKPAKIAME-----VGEGKLRPALP---EEDGQLRELIELICLSWDGDASV 450
PY D P+ ++E V E KLRP +P + LR + +++ W + +
Sbjct: 250 YQLPYY--DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA 307
Query: 451 RPSFSSITCSLKNI 464
R + I +L +
Sbjct: 308 RLTALRIKKTLSQL 321
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 129/315 (40%), Gaps = 65/315 (20%)
Query: 194 PKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRH 253
+ I LQE IG+G ++R WRG +VAVK F + E F E+ RH
Sbjct: 8 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVK-----IFSSREERSWFREAEIYQTVMLRH 62
Query: 254 RFVLQLMGACLEPPYRGWLVTELLGTTLKEWL------HGLGSQRRKERMVPLPPFEERL 307
+L + A + GT + WL HG V + E +
Sbjct: 63 ENILGFIAADNKDN----------GTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMI 109
Query: 308 ARALEIAQAMQYLH------EQKPKVIHRDLKPSNIFLDDAKHVRIADFG----HARFLS 357
AL A + +LH + KP + HRDLK NI + IAD G H
Sbjct: 110 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 169
Query: 358 DGEMA---LTGTFVYMAPEVI-------QCEPYSEKSDVYSFGIILNEI-----ITGNH- 401
++A GT YMAPEV+ E + +++D+Y+ G++ EI I G H
Sbjct: 170 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF-KRADIYAMGLVFWEIARRCSIGGIHE 228
Query: 402 ----PYIEKDYKPAKIAME-----VGEGKLRPALP---EEDGQLRELIELICLSWDGDAS 449
PY D P+ ++E V E KLRP +P + LR + +++ W + +
Sbjct: 229 DYQLPYY--DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGA 286
Query: 450 VRPSFSSITCSLKNI 464
R + I +L +
Sbjct: 287 ARLTALRIKKTLSQL 301
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 15/140 (10%)
Query: 271 WLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLAR-ALEIAQAMQYLHEQKPKVIH 329
W+ EL+ T+L ++ + K + +P E+ L + A+ I +A+++LH K VIH
Sbjct: 82 WICMELMDTSLDKFYKQVID---KGQTIP----EDILGKIAVSIVKALEHLH-SKLSVIH 133
Query: 330 RDLKPSNIFLDDAKHVRIADFGHARFLSD--GEMALTGTFVYMAPEVIQCE----PYSEK 383
RD+KPSN+ ++ V++ DFG + +L D + G YMAPE I E YS K
Sbjct: 134 RDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVK 193
Query: 384 SDVYSFGIILNEIITGNHPY 403
SD++S GI + E+ PY
Sbjct: 194 SDIWSLGITMIELAILRFPY 213
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 129/315 (40%), Gaps = 65/315 (20%)
Query: 194 PKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRH 253
+ I LQE IG+G ++R WRG +VAVK F + E F E+ RH
Sbjct: 3 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVK-----IFSSREERSWFREAEIYQTVMLRH 57
Query: 254 RFVLQLMGACLEPPYRGWLVTELLGTTLKEWL------HGLGSQRRKERMVPLPPFEERL 307
+L + A + GT + WL HG V + E +
Sbjct: 58 ENILGFIAADNKDN----------GTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMI 104
Query: 308 ARALEIAQAMQYLH------EQKPKVIHRDLKPSNIFLDDAKHVRIADFG----HARFLS 357
AL A + +LH + KP + HRDLK NI + IAD G H
Sbjct: 105 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 164
Query: 358 DGEMA---LTGTFVYMAPEVI-------QCEPYSEKSDVYSFGIILNEI-----ITGNH- 401
++A GT YMAPEV+ E + +++D+Y+ G++ EI I G H
Sbjct: 165 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF-KRADIYAMGLVFWEIARRCSIGGIHE 223
Query: 402 ----PYIEKDYKPAKIAME-----VGEGKLRPALP---EEDGQLRELIELICLSWDGDAS 449
PY D P+ ++E V E KLRP +P + LR + +++ W + +
Sbjct: 224 DYQLPYY--DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGA 281
Query: 450 VRPSFSSITCSLKNI 464
R + I +L +
Sbjct: 282 ARLTALRIKKTLSQL 296
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 129/314 (41%), Gaps = 65/314 (20%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHR 254
+ I LQE IG+G ++R WRG +VAVK F + E F E+ RH
Sbjct: 42 RTIVLQESIGKGRFGEVWRGKWRGEEVAVK-----IFSSREERSWFREAEIYQTVMLRHE 96
Query: 255 FVLQLMGACLEPPYRGWLVTELLGTTLKEWL------HGLGSQRRKERMVPLPPFEERLA 308
+L + A + GT + WL HG V + E +
Sbjct: 97 NILGFIAADNKDN----------GTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMIK 143
Query: 309 RALEIAQAMQYLH------EQKPKVIHRDLKPSNIFLDDAKHVRIADFG----HARFLSD 358
AL A + +LH + KP + HRDLK NI + IAD G H
Sbjct: 144 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 203
Query: 359 GEMA---LTGTFVYMAPEVI-------QCEPYSEKSDVYSFGIILNEI-----ITGNH-- 401
++A GT YMAPEV+ E + +++D+Y+ G++ EI I G H
Sbjct: 204 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESF-KRADIYAMGLVFWEIARRCSIGGIHED 262
Query: 402 ---PYIEKDYKPAKIAME-----VGEGKLRPALP---EEDGQLRELIELICLSWDGDASV 450
PY D P+ ++E V E KLRP +P + LR + +++ W + +
Sbjct: 263 YQLPYY--DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA 320
Query: 451 RPSFSSITCSLKNI 464
R + I +L +
Sbjct: 321 RLTALRIKKTLSQL 334
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 118/265 (44%), Gaps = 46/265 (17%)
Query: 218 GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTEL 276
G VAVK + P+ + N + +E++ L H +++ G C E G L+ E
Sbjct: 50 GEQVAVKSLKPE---SGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 106
Query: 277 LGT-TLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPS 335
L + +LKE+L + K ++ +++L A++I + M YL ++ +HRDL
Sbjct: 107 LPSGSLKEYL-----PKNKNKI----NLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAAR 155
Query: 336 NIFLDDAKHVRIADFGHARFLSDGEMALT------GTFVYMAPEVIQCEPYSEKSDVYSF 389
N+ ++ V+I DFG + + + T + APE + + SDV+SF
Sbjct: 156 NVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSF 215
Query: 390 GIILNEIITGNHPYIEKDYKPAKIAME-----------------VGEGKLRPALPEEDGQ 432
G+ L+E++T Y + D P + ++ + EGK P P
Sbjct: 216 GVTLHELLT----YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPD- 270
Query: 433 LRELIELICLSWDGDASVRPSFSSI 457
E+ +L+ W+ S R SF ++
Sbjct: 271 --EVYQLMRKCWEFQPSNRTSFQNL 293
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 118/265 (44%), Gaps = 46/265 (17%)
Query: 218 GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGW-LVTEL 276
G VAVK + P+ + N + +E++ L H +++ G C E G L+ E
Sbjct: 38 GEQVAVKSLKPE---SGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 94
Query: 277 LGT-TLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPS 335
L + +LKE+L + K ++ +++L A++I + M YL ++ +HRDL
Sbjct: 95 LPSGSLKEYL-----PKNKNKI----NLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAAR 143
Query: 336 NIFLDDAKHVRIADFGHARFLSDGEMALT------GTFVYMAPEVIQCEPYSEKSDVYSF 389
N+ ++ V+I DFG + + + T + APE + + SDV+SF
Sbjct: 144 NVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSF 203
Query: 390 GIILNEIITGNHPYIEKDYKPAKIAME-----------------VGEGKLRPALPEEDGQ 432
G+ L+E++T Y + D P + ++ + EGK P P
Sbjct: 204 GVTLHELLT----YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPD- 258
Query: 433 LRELIELICLSWDGDASVRPSFSSI 457
E+ +L+ W+ S R SF ++
Sbjct: 259 --EVYQLMRKCWEFQPSNRTSFQNL 281
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 129/315 (40%), Gaps = 65/315 (20%)
Query: 194 PKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRH 253
+ I LQE IG+G ++R WRG +VAVK F + E F E+ RH
Sbjct: 5 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVK-----IFSSREERSWFREAEIYQTVMLRH 59
Query: 254 RFVLQLMGACLEPPYRGWLVTELLGTTLKEWL------HGLGSQRRKERMVPLPPFEERL 307
+L + A + GT + WL HG V + E +
Sbjct: 60 ENILGFIAADNKDN----------GTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMI 106
Query: 308 ARALEIAQAMQYLH------EQKPKVIHRDLKPSNIFLDDAKHVRIADFG----HARFLS 357
AL A + +LH + KP + HRDLK NI + IAD G H
Sbjct: 107 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 166
Query: 358 DGEMA---LTGTFVYMAPEVI-------QCEPYSEKSDVYSFGIILNEI-----ITGNH- 401
++A GT YMAPEV+ E + +++D+Y+ G++ EI I G H
Sbjct: 167 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF-KRADIYAMGLVFWEIARRCSIGGIHE 225
Query: 402 ----PYIEKDYKPAKIAME-----VGEGKLRPALP---EEDGQLRELIELICLSWDGDAS 449
PY D P+ ++E V E KLRP +P + LR + +++ W + +
Sbjct: 226 DYQLPYY--DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGA 283
Query: 450 VRPSFSSITCSLKNI 464
R + I +L +
Sbjct: 284 ARLTALRIKKTLSQL 298
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 66
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 67 LLD-VIHTENKLYLVFEFLHQDLKDFMDASALTG-----IPLPLIKSYL---FQLLQGLA 117
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 118 FCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDG 359
F E AR EI A+ YLH +K V++RDLK N+ LD H++I DFG + + DG
Sbjct: 107 FSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 165
Query: 360 EM--ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+APEV++ Y D + G+++ E++ G P+ +D++
Sbjct: 166 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 217
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 129/315 (40%), Gaps = 65/315 (20%)
Query: 194 PKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRH 253
+ I LQE IG+G ++R WRG +VAVK F + E F E+ RH
Sbjct: 2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVK-----IFSSREERSWFREAEIYQTVMLRH 56
Query: 254 RFVLQLMGACLEPPYRGWLVTELLGTTLKEWL------HGLGSQRRKERMVPLPPFEERL 307
+L + A + GT + WL HG V + E +
Sbjct: 57 ENILGFIAADNKDN----------GTWTQLWLVSDYHEHGSLFDYLNRYTVTV---EGMI 103
Query: 308 ARALEIAQAMQYLH------EQKPKVIHRDLKPSNIFLDDAKHVRIADFG----HARFLS 357
AL A + +LH + KP + HRDLK NI + IAD G H
Sbjct: 104 KLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 163
Query: 358 DGEMA---LTGTFVYMAPEVI-------QCEPYSEKSDVYSFGIILNEI-----ITGNH- 401
++A GT YMAPEV+ E + +++D+Y+ G++ EI I G H
Sbjct: 164 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF-KRADIYAMGLVFWEIARRCSIGGIHE 222
Query: 402 ----PYIEKDYKPAKIAME-----VGEGKLRPALP---EEDGQLRELIELICLSWDGDAS 449
PY D P+ ++E V E KLRP +P + LR + +++ W + +
Sbjct: 223 DYQLPYY--DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGA 280
Query: 450 VRPSFSSITCSLKNI 464
R + I +L +
Sbjct: 281 ARLTALRIKKTLSQL 295
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 104/230 (45%), Gaps = 53/230 (23%)
Query: 203 IGQGTTANIYRAIWRGLD---VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQL 259
+GQG + +A LD A+K I HT E T + EV L+ H++V++
Sbjct: 14 LGQGAFGQVVKA-RNALDSRYYAIKKIR----HTEEKLSTILS-EVXLLASLNHQYVVRY 67
Query: 260 MGACLE-----PPYRGWLVTELL--------GTTLKEWLHGLG-SQRRKERMVPLPPFEE 305
A LE P L TL + +H +Q+R E
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW-------- 119
Query: 306 RLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--------- 356
RL R +I +A+ Y+H Q +IHR+LKP NIF+D++++V+I DFG A+ +
Sbjct: 120 RLFR--QILEALSYIHSQG--IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKL 175
Query: 357 --------SDGEMALTGTFVYMAPEVIQ-CEPYSEKSDVYSFGIILNEII 397
SD + GT Y+A EV+ Y+EK D YS GII E I
Sbjct: 176 DSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDG 359
F E AR EI A+ YLH +K V++RDLK N+ LD H++I DFG + + DG
Sbjct: 105 FSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 163
Query: 360 EM--ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+APEV++ Y D + G+++ E++ G P+ +D++
Sbjct: 164 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 215
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ ++ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDG 359
F E AR EI A+ YLH +K V++RDLK N+ LD H++I DFG + + DG
Sbjct: 106 FSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 164
Query: 360 EM--ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+APEV++ Y D + G+++ E++ G P+ +D++
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 67
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 68 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 118
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 119 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 66
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 67 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 117
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 118 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 122/262 (46%), Gaps = 41/262 (15%)
Query: 171 PLLQQSDLAVTVSQAKMNGWY--------IDPK----EIDLQEKIGQGTTANIYRAIWRG 218
PL S++A+++S+ K+ ++ + PK E + + +G G + A R
Sbjct: 113 PLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERK 172
Query: 219 L--DVAVKCIYPDFFHTNE----NAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWL 272
VA++ I F + E++ L + H ++++ Y ++
Sbjct: 173 TCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY--YI 230
Query: 273 VTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRD 331
V EL+ G L + + +G++R KE L ++ LA +QYLHE +IHRD
Sbjct: 231 VLELMEGGELFDKV--VGNKRLKEATCKLYFYQMLLA--------VQYLHENG--IIHRD 278
Query: 332 LKPSNIFLDDAKH---VRIADFGHARFLSDGEM--ALTGTFVYMAPEV---IQCEPYSEK 383
LKP N+ L + ++I DFGH++ L + + L GT Y+APEV + Y+
Sbjct: 279 LKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRA 338
Query: 384 SDVYSFGIILNEIITGNHPYIE 405
D +S G+IL ++G P+ E
Sbjct: 339 VDCWSLGVILFICLSGYPPFSE 360
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 69
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 70 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 120
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 121 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 68
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 69 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 119
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 120 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 69
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 70 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 120
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 121 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 67
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 68 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 118
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 119 FCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 66
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 67 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 117
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 118 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 68
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 69 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 119
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 120 FCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 66
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 67 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 117
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 118 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 68
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 69 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 119
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 120 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 177
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 65
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 66 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 116
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 117 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 174
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 66
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 67 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 117
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 118 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 175
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 67
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 68 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 118
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 119 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 176
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 70
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 71 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 121
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 122 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 179
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 93 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 137
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 138 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 196 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 250
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 251 PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 286
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 7/112 (6%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDG 359
F E AR EI A++YLH + V++RD+K N+ LD H++I DFG + +SDG
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159
Query: 360 EMALT--GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
T GT Y+APEV++ Y D + G+++ E++ G P+ +D++
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 65
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 66 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 116
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 117 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 174
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 130/295 (44%), Gaps = 28/295 (9%)
Query: 186 KMNGWYIDPKEIDLQEKIGQGTTANIYRAIWRGLD-----VAVKCIYPDFFHTNENAVTF 240
K+ I ++ L +G+G ++ A + D VAVK + D +++ +
Sbjct: 14 KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSD--IEE 71
Query: 241 FAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHG-----LGSQRRKE 295
F +E + H V +L+G L +G L ++ L HG L + R E
Sbjct: 72 FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMV--ILPFMKHGDLHAFLLASRIGE 129
Query: 296 RMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
LP + + ++IA M+YL + IHRDL N L + V +ADFG +R
Sbjct: 130 NPFNLP-LQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVADFGLSRK 186
Query: 356 LSDGEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYK 409
+ G+ G ++A E + Y+ SDV++FG+ + EI+T G PY +
Sbjct: 187 IYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPY--AGIE 244
Query: 410 PAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
A+I + G PE + E+ +L+ W D RPSF+ + L+NI
Sbjct: 245 NAEIYNYLIGGNRLKQPPE---CMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+ +L+ G L +E +GSQ L ++IA
Sbjct: 85 LGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 129
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 130 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 242
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 243 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 122/262 (46%), Gaps = 41/262 (15%)
Query: 171 PLLQQSDLAVTVSQAKMNGWY--------IDPK----EIDLQEKIGQGTTANIYRAIWRG 218
PL S++A+++S+ K+ ++ + PK E + + +G G + A R
Sbjct: 99 PLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERK 158
Query: 219 L--DVAVKCIYPDFFHTNE----NAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWL 272
VA++ I F + E++ L + H ++++ Y ++
Sbjct: 159 TCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY--YI 216
Query: 273 VTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRD 331
V EL+ G L + + +G++R KE L ++ LA +QYLHE +IHRD
Sbjct: 217 VLELMEGGELFDKV--VGNKRLKEATCKLYFYQMLLA--------VQYLHENG--IIHRD 264
Query: 332 LKPSNIFLDDAKH---VRIADFGHARFLSDGEM--ALTGTFVYMAPEV---IQCEPYSEK 383
LKP N+ L + ++I DFGH++ L + + L GT Y+APEV + Y+
Sbjct: 265 LKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRA 324
Query: 384 SDVYSFGIILNEIITGNHPYIE 405
D +S G+IL ++G P+ E
Sbjct: 325 VDCWSLGVILFICLSGYPPFSE 346
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 83 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 127
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 128 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 240
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 241 PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+ I D E + +E+ L H +++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 66
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 67 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 117
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T T Y APE+
Sbjct: 118 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+ I D E + +E+ L H +++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 65
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 66 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 116
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T T Y APE+
Sbjct: 117 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 86 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 130
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 131 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 243
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 244 PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 279
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+ +L+ G L +E +GSQ L ++IA
Sbjct: 87 LGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 131
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 132 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 244
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 245 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 280
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 7/112 (6%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDG 359
F E AR EI A++YLH + V++RD+K N+ LD H++I DFG + +SDG
Sbjct: 105 FTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 162
Query: 360 EMALT--GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
T GT Y+APEV++ Y D + G+++ E++ G P+ +D++
Sbjct: 163 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 214
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 7/112 (6%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDG 359
F E AR EI A++YLH + V++RD+K N+ LD H++I DFG + +SDG
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159
Query: 360 EMALT--GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
T GT Y+APEV++ Y D + G+++ E++ G P+ +D++
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTF 367
++ + + + YL E K K++HRD+KPSNI ++ +++ DFG + L D EMA GT
Sbjct: 113 SIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-EMANEFVGTR 170
Query: 368 VYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHP 402
YM+PE +Q YS +SD++S G+ L E+ G +P
Sbjct: 171 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 74/131 (56%), Gaps = 9/131 (6%)
Query: 304 EERLAR-ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG-EM 361
EE L + ++ + + + YL E K +++HRD+KPSNI ++ +++ DFG + L D
Sbjct: 113 EEILGKVSIAVLRGLAYLRE-KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN 171
Query: 362 ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGK 421
+ GT YMAPE +Q YS +SD++S G+ L E+ G +P D K +E G
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAK----ELEAIFG- 226
Query: 422 LRPALPEEDGQ 432
RP + E+G+
Sbjct: 227 -RPVVDGEEGE 236
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 69
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK ++ +PLP + L ++ Q +
Sbjct: 70 LLD-VIHTENKLYLVFEFLHQDLKTFMDASALTG-----IPLPLIKSYL---FQLLQGLA 120
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 121 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT Y+AP +I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 23/171 (13%)
Query: 244 EVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPP 302
E++ L + H ++++ Y ++V EL+ G L + + +G++R KE L
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY--YIVLELMEGGELFDKV--VGNKRLKEATCKLYF 120
Query: 303 FEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLSDG 359
++ LA +QYLHE +IHRDLKP N+ L + ++I DFGH++ L +
Sbjct: 121 YQMLLA--------VQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 360 EM--ALTGTFVYMAPEV---IQCEPYSEKSDVYSFGIILNEIITGNHPYIE 405
+ L GT Y+APEV + Y+ D +S G+IL ++G P+ E
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 23/171 (13%)
Query: 244 EVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPP 302
E++ L + H ++++ Y ++V EL+ G L + + +G++R KE L
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY--YIVLELMEGGELFDKV--VGNKRLKEATCKLYF 120
Query: 303 FEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLSDG 359
++ LA +QYLHE +IHRDLKP N+ L + ++I DFGH++ L +
Sbjct: 121 YQMLLA--------VQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 360 EM--ALTGTFVYMAPEV---IQCEPYSEKSDVYSFGIILNEIITGNHPYIE 405
+ L GT Y+APEV + Y+ D +S G+IL ++G P+ E
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG-EMALTGTFV 368
++ + + + YL E K K++HRD+KPSNI ++ +++ DFG + L D + GT
Sbjct: 172 SIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 230
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
YM+PE +Q YS +SD++S G+ L E+ G +P D K
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 271
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 23/171 (13%)
Query: 244 EVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPP 302
E++ L + H ++++ Y ++V EL+ G L + + +G++R KE L
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDY--YIVLELMEGGELFDKV--VGNKRLKEATCKLYF 120
Query: 303 FEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLSDG 359
++ LA +QYLHE +IHRDLKP N+ L + ++I DFGH++ L +
Sbjct: 121 YQMLLA--------VQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 170
Query: 360 EM--ALTGTFVYMAPEV---IQCEPYSEKSDVYSFGIILNEIITGNHPYIE 405
+ L GT Y+APEV + Y+ D +S G+IL ++G P+ E
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 23/171 (13%)
Query: 244 EVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPP 302
E++ L + H ++++ Y ++V EL+ G L + + +G++R KE L
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAEDY--YIVLELMEGGELFDKV--VGNKRLKEATCKLYF 119
Query: 303 FEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLSDG 359
++ LA +QYLHE +IHRDLKP N+ L + ++I DFGH++ L +
Sbjct: 120 YQMLLA--------VQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 169
Query: 360 EM--ALTGTFVYMAPEV---IQCEPYSEKSDVYSFGIILNEIITGNHPYIE 405
+ L GT Y+APEV + Y+ D +S G+IL ++G P+ E
Sbjct: 170 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 220
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 139/298 (46%), Gaps = 46/298 (15%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWRG----LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
+D +I Q+ IG+G + +A + +D A+K + + +++ FA E++
Sbjct: 19 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE---YASKDDHRDFAGELEV 75
Query: 248 LSRQRHR-FVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPF--- 303
L + H ++ L+GAC +RG+L + L L RK R++ P
Sbjct: 76 LCKLGHHPNIINLLGAC---EHRGYLYLAIEYAPHGNLLDFL----RKSRVLETDPAFAI 128
Query: 304 ----------EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA 353
++ L A ++A+ M YL +++ IHR+L NI + + +IADFG +
Sbjct: 129 ANSTASTLSSQQLLHFAADVARGMDYLSQKQ--FIHRNLAARNILVGENYVAKIADFGLS 186
Query: 354 RFLSDGEMALTGTF-----VYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKD 407
R E+ + T +MA E + Y+ SDV+S+G++L EI++ G PY
Sbjct: 187 R---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYC--G 241
Query: 408 YKPAKIAMEVGEG-KLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
A++ ++ +G +L L +D E+ +L+ W RPSF+ I SL +
Sbjct: 242 MTCAELYEKLPQGYRLEKPLNCDD----EVYDLMRQCWREKPYERPSFAQILVSLNRM 295
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+ +L+ G L +E +GSQ L ++IA
Sbjct: 87 LGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 131
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 132 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 190 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 244
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 245 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 280
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+ +L+ G L +E +GSQ L ++IA
Sbjct: 84 LGICLTSTVQ--LIMQLMPFGXLLDYVREHKDNIGSQYL-------------LNWCVQIA 128
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 129 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 241
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 242 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 23/171 (13%)
Query: 244 EVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPP 302
E++ L + H ++++ Y ++V EL+ G L + + +G++R KE L
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAEDY--YIVLELMEGGELFDKV--VGNKRLKEATCKLYF 126
Query: 303 FEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLSDG 359
++ LA +QYLHE +IHRDLKP N+ L + ++I DFGH++ L +
Sbjct: 127 YQMLLA--------VQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET 176
Query: 360 EM--ALTGTFVYMAPEV---IQCEPYSEKSDVYSFGIILNEIITGNHPYIE 405
+ L GT Y+APEV + Y+ D +S G+IL ++G P+ E
Sbjct: 177 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 227
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+ +L+ G L +E +GSQ L ++IA
Sbjct: 85 LGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 129
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 130 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 242
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 243 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 278
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+ +L+ G L +E +GSQ L ++IA
Sbjct: 84 LGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 128
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 129 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 187 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 241
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 242 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 277
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDG 359
F E AR EI A++YLH + V++RD+K N+ LD H++I DFG + +SDG
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159
Query: 360 EM--ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+APEV++ Y D + G+++ E++ G P+ +D++
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDG 359
F E AR EI A++YLH + V++RD+K N+ LD H++I DFG + +SDG
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159
Query: 360 EM--ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+APEV++ Y D + G+++ E++ G P+ +D++
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+ +L+ G L +E +GSQ L ++IA
Sbjct: 86 LGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 130
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 131 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 189 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 243
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 244 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 279
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDG 359
F E AR EI A++YLH + V++RD+K N+ LD H++I DFG + +SDG
Sbjct: 107 FTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 164
Query: 360 EM--ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+APEV++ Y D + G+++ E++ G P+ +D++
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG-EMALTGTFV 368
++ + + + YL E K K++HRD+KPSNI ++ +++ DFG + L D + GT
Sbjct: 137 SIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 195
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
YM+PE +Q YS +SD++S G+ L E+ G +P D K
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 236
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDG 359
F E AR EI A++YLH + V++RD+K N+ LD H++I DFG + +SDG
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159
Query: 360 EM--ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
GT Y+APEV++ Y D + G+++ E++ G P+ +D++
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 196 EIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRH 253
+ D+ +G+G N+Y R +A+K ++ E +E++ S RH
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL-EKEGVEHQLRREIEIQSHLRH 73
Query: 254 RFVLQLMGACLEPPYRGWLVTELL--GTTLKEW-LHGLGSQRRKERMVPLPPFEERLARA 310
+L+ M R +L+ E G KE HG ++R +
Sbjct: 74 PNILR-MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME----------- 121
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALTGTF 367
E+A A+ Y HE+K VIHRD+KP N+ + ++IADFG HA L M GT
Sbjct: 122 -ELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC--GTL 176
Query: 368 VYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+ PE+I+ + + EK D++ G++ E + G P+
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 125/295 (42%), Gaps = 53/295 (17%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHR 254
K+I + ++IG+G ++ WRG VAVK F T E A F E+ RH
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKV-----FFTTEEASWFRETEIYQTVLMRHE 91
Query: 255 FVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+L + A ++ W L+ H GS + L + L A
Sbjct: 92 NILGFIAADIKGT-GSWTQLYLITD-----YHENGSLYDYLKSTTLDA-KSMLKLAYSSV 144
Query: 315 QAMQYLHEQ------KPKVIHRDLKPSNIFLDDAKHVRIADFGHA-RFLSD-GEMAL--- 363
+ +LH + KP + HRDLK NI + IAD G A +F+SD E+ +
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPN 204
Query: 364 --TGTFVYMAPEVIQCEPYSEK-------SDVYSFGIILNEI----ITGN------HPYI 404
GT YM PEV+ E + +D+YSFG+IL E+ ++G PY
Sbjct: 205 TRVGTKRYMPPEVLD-ESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY- 262
Query: 405 EKDYKPAKIAME-----VGEGKLRPALPE---EDGQLRELIELICLSWDGDASVR 451
D P+ + E V KLRP+ P D LR++ +L+ W + + R
Sbjct: 263 -HDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASR 316
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 196 EIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRH 253
+ D+ +G+G N+Y R +A+K ++ E +E++ S RH
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL-EKEGVEHQLRREIEIQSHLRH 74
Query: 254 RFVLQLMGACLEPPYRGWLVTELL--GTTLKEW-LHGLGSQRRKERMVPLPPFEERLARA 310
+L+ M R +L+ E G KE HG ++R +
Sbjct: 75 PNILR-MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME----------- 122
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALTGTF 367
E+A A+ Y HE+K VIHRD+KP N+ + ++IADFG HA L M GT
Sbjct: 123 -ELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC--GTL 177
Query: 368 VYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+ PE+I+ + + EK D++ G++ E + G P+
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+ +L+ G L +E +GSQ L ++IA
Sbjct: 83 LGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 127
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 128 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 240
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 196 EIDLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRH 253
+ D+ +G+G N+Y R +A+K ++ E +E++ S RH
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL-EKEGVEHQLRREIEIQSHLRH 73
Query: 254 RFVLQLMGACLEPPYRGWLVTELL--GTTLKEW-LHGLGSQRRKERMVPLPPFEERLARA 310
+L+ M R +L+ E G KE HG ++R +
Sbjct: 74 PNILR-MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME----------- 121
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDGEMALTGTF 367
E+A A+ Y HE+K VIHRD+KP N+ + ++IADFG HA L M GT
Sbjct: 122 -ELADALHYCHERK--VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC--GTL 176
Query: 368 VYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+ PE+I+ + + EK D++ G++ E + G P+
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG-EMALTGTFV 368
++ + + + YL E K K++HRD+KPSNI ++ +++ DFG + L D + GT
Sbjct: 129 SIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 187
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHP 402
YM+PE +Q YS +SD++S G+ L E+ G +P
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+G G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+ +L+ G L +E +GSQ L ++IA
Sbjct: 85 LGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 129
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 130 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 188 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 242
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 243 PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 278
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA-RFLSDGEMALTGTFV 368
A EI ++++H + V++RDLKP+NI LD+ HVRI+D G A F A GT
Sbjct: 297 AAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG 354
Query: 369 YMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
YMAPEV+Q Y +D +S G +L +++ G+ P+
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+ G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 83 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 127
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 128 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 186 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 240
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA-RFLSDGEMALTGTFV 368
A EI ++++H + V++RDLKP+NI LD+ HVRI+D G A F A GT
Sbjct: 298 AAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG 355
Query: 369 YMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
YMAPEV+Q Y +D +S G +L +++ G+ P+
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Query: 301 PPFEERLA--RALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P F+E A +I +++LH++ +I+RDLKP N+ LDD +VRI+D G A L
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 359 GEM---ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
G+ GT +MAPE++ E Y D ++ G+ L E+I P+
Sbjct: 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 7/105 (6%)
Query: 304 EERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM 361
EE AR L +I A+ Y H V+HRDLKP N+ LD + +IADFG + +SDGE
Sbjct: 109 EEMEARRLFQQILSAVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166
Query: 362 AL--TGTFVYMAPEVIQCEPYS-EKSDVYSFGIILNEIITGNHPY 403
G+ Y APEVI Y+ + D++S G+IL ++ G P+
Sbjct: 167 LRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Query: 301 PPFEERLA--RALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P F+E A +I +++LH++ +I+RDLKP N+ LDD +VRI+D G A L
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 359 GEM---ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
G+ GT +MAPE++ E Y D ++ G+ L E+I P+
Sbjct: 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG-EMALTGTFV 368
++ + + + YL E K K++HRD+KPSNI ++ +++ DFG + L D + GT
Sbjct: 110 SIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 168
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
YM+PE +Q YS +SD++S G+ L E+ G +P D K
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG-EMALTGTFV 368
++ + + + YL E K K++HRD+KPSNI ++ +++ DFG + L D + GT
Sbjct: 110 SIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 168
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
YM+PE +Q YS +SD++S G+ L E+ G +P D K
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG-EMALTGTFV 368
++ + + + YL E K K++HRD+KPSNI ++ +++ DFG + L D + GT
Sbjct: 110 SIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 168
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
YM+PE +Q YS +SD++S G+ L E+ G +P D K
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 201 EKIGQGTTANIYRA--IWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIGQG + +Y A + G +VA++ +++ + + ++
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIR-------------------QMNLQQQPKKELIIN 66
Query: 259 ---LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL-EIA 314
+M P +L + L+G L + L + + E ++A E
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 126
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS---DGEMALTGTFVYMA 371
QA+++LH + VIHRD+K NI L V++ DFG ++ + GT +MA
Sbjct: 127 QALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMA 184
Query: 372 PEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKD 407
PEV+ + Y K D++S GI+ E+I G PY+ ++
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+ G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+T+L+ G L +E +GSQ L ++IA
Sbjct: 90 LGICLTSTVQ--LITQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 134
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 135 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 247
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 248 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 34/278 (12%)
Query: 195 KEIDLQE--KIGQGTTANIYRAIWR------GLDVAVKCIYPDFFHTNENAVTFFAQEVD 246
KE +L++ +G G +++ +W + V +K I + AVT +
Sbjct: 11 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIG 70
Query: 247 TLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER 306
+L H +++L+G C P LVT+ L L L R+ R P +
Sbjct: 71 SLD---HAHIVRLLGLC--PGSSLQLVTQYLP------LGSLLDHVRQHRGALGP--QLL 117
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT 366
L ++IA+ M YL E ++HR+L N+ L V++ADFG A L + L +
Sbjct: 118 LNWGVQIAKGMYYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYS 175
Query: 367 -----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEG 420
+MA E I Y+ +SDV+S+G+ + E++T G PY +E GE
Sbjct: 176 EAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGER 235
Query: 421 KLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSIT 458
+P + D + ++ W D ++RP+F +
Sbjct: 236 LAQPQICTID-----VYMVMVKCWMIDENIRPTFKELA 268
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Query: 301 PPFEERLA--RALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P F+E A +I +++LH++ +I+RDLKP N+ LDD +VRI+D G A L
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 359 GEM---ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
G+ GT +MAPE++ E Y D ++ G+ L E+I P+
Sbjct: 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Query: 301 PPFEERLA--RALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P F+E A +I +++LH++ +I+RDLKP N+ LDD +VRI+D G A L
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 359 GEM---ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
G+ GT +MAPE++ E Y D ++ G+ L E+I P+
Sbjct: 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA-RFLSDGEMALTGTFV 368
A EI ++++H + V++RDLKP+NI LD+ HVRI+D G A F A GT
Sbjct: 298 AAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG 355
Query: 369 YMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
YMAPEV+Q Y +D +S G +L +++ G+ P+
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA-RFLSDGEMALTGTFV 368
A EI ++++H + V++RDLKP+NI LD+ HVRI+D G A F A GT
Sbjct: 298 AAEIILGLEHMHNRF--VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG 355
Query: 369 YMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
YMAPEV+Q Y +D +S G +L +++ G+ P+
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 65
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E + LK ++ +PLP + L ++ Q +
Sbjct: 66 LLD-VIHTENKLYLVFEHVHQDLKTFMDASALTG-----IPLPLIKSYL---FQLLQGLA 116
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T T Y APE+
Sbjct: 117 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 174
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 32/268 (11%)
Query: 203 IGQGTTANIYRAIWR------GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFV 256
+G G +++ +W + V +K I + AVT + +L H +
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD---HAHI 95
Query: 257 LQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQA 316
++L+G C P LVT+ L L L R+ R P L ++IA+
Sbjct: 96 VRLLGLC--PGSSLQLVTQYLP------LGSLLDHVRQHRGALGPQL--LLNWGVQIAKG 145
Query: 317 MQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT-----FVYMA 371
M YL E ++HR+L N+ L V++ADFG A L + L + +MA
Sbjct: 146 MYYLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
Query: 372 PEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPEED 430
E I Y+ +SDV+S+G+ + E++T G PY +E GE +P + D
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTID 263
Query: 431 GQLRELIELICLSWDGDASVRPSFSSIT 458
+ ++ W D ++RP+F +
Sbjct: 264 VYM-----VMVKCWMIDENIRPTFKELA 286
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 201 EKIGQGTTANIYRA--IWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIGQG + +Y A + G +VA++ +++ + + ++
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIR-------------------QMNLQQQPKKELIIN 66
Query: 259 ---LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL-EIA 314
+M P +L + L+G L + L + + E ++A E
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 126
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS---DGEMALTGTFVYMA 371
QA+++LH + VIHRD+K NI L V++ DFG ++ + GT +MA
Sbjct: 127 QALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMA 184
Query: 372 PEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKD 407
PEV+ + Y K D++S GI+ E+I G PY+ ++
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG-EMALTGTFV 368
++ + + + YL E K K++HRD+KPSNI ++ +++ DFG + L D + GT
Sbjct: 110 SIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 168
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
YM+PE +Q YS +SD++S G+ L E+ G +P D K
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG-EMALTGTFV 368
++ + + + YL E K K++HRD+KPSNI ++ +++ DFG + L D + GT
Sbjct: 110 SIAVIKGLTYLRE-KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 168
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
YM+PE +Q YS +SD++S G+ L E+ G +P D K
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 32/267 (11%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCI--YPDFFHTNENAVTFFAQEVDTLSR 250
K E +G G + ++ R G A+KCI P F ++ E+ L +
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSS------LENEIAVLKK 62
Query: 251 QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARA 310
+H ++ L E +LV +L+ G R ER V + E+ A
Sbjct: 63 IKHENIVTLED-IYESTTHYYLVMQLVSG-------GELFDRILERGV----YTEKDASL 110
Query: 311 L--EIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHARFLSDGEMALT- 364
+ ++ A++YLHE ++HRDLKP N+ ++ + I DFG ++ +G M+
Sbjct: 111 VIQQVLSAVKYLHENG--IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTAC 168
Query: 365 GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRP 424
GT Y+APEV+ +PYS+ D +S G+I ++ G P+ E+ +K+ ++ EG
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE--TESKLFEKIKEGYYEF 226
Query: 425 ALPEEDGQLRELIELICLSWDGDASVR 451
P D + IC + D + R
Sbjct: 227 ESPFWDDISESAKDFICHLLEKDPNER 253
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 14/107 (13%)
Query: 306 RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--A 362
++ RAL E+ A+ L+ ++HRDLKP NI LDD ++++ DFG + L GE +
Sbjct: 128 KIMRALLEVICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS 182
Query: 363 LTGTFVYMAPEVIQCE------PYSEKSDVYSFGIILNEIITGNHPY 403
+ GT Y+APE+I+C Y ++ D++S G+I+ ++ G+ P+
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 24/133 (18%)
Query: 280 TLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL 339
LK+W++ S +E V L F ++IA+A+++LH + ++HRDLKPSNIF
Sbjct: 147 NLKDWMNRRCSLEDREHGVCLHIF-------IQIAEAVEFLHSKG--LMHRDLKPSNIFF 197
Query: 340 DDAKHVRIADFGHARFLSDGEMALT---------------GTFVYMAPEVIQCEPYSEKS 384
V++ DFG + E T GT +YM+PE I YS K
Sbjct: 198 TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKV 257
Query: 385 DVYSFGIILNEII 397
D++S G+IL E++
Sbjct: 258 DIFSLGLILFELL 270
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 243 QEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP 302
+E+ L RH +++L ++ +V E G L +++ QR K
Sbjct: 62 REISYLRLLRHPHIIKLYDV-IKSKDEIIMVIEYAGNELFDYI----VQRDK-------- 108
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
E+ AR +I A++Y H K ++HRDLKP N+ LD+ +V+IADFG + ++DG
Sbjct: 109 MSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166
Query: 361 MALT--GTFVYMAPEVIQCEPYS-EKSDVYSFGIILNEIITGNHPY 403
T G+ Y APEVI + Y+ + DV+S G+IL ++ P+
Sbjct: 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 201 EKIGQGTTANIYRA--IWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIGQG + +Y A + G +VA++ +++ + + ++
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIR-------------------QMNLQQQPKKELIIN 67
Query: 259 ---LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL-EIA 314
+M P +L + L+G L + L + + E ++A E
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 127
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS---DGEMALTGTFVYMA 371
QA+++LH + VIHRD+K NI L V++ DFG ++ + GT +MA
Sbjct: 128 QALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMA 185
Query: 372 PEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKD 407
PEV+ + Y K D++S GI+ E+I G PY+ ++
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 221
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 27/255 (10%)
Query: 210 NIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYR 269
+YR + +DVA+K + T + +E + + + ++++L+G C
Sbjct: 29 GVYRMRKKQIDVAIKVLKQG---TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALM 85
Query: 270 GWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIH 329
LV E+ G LH +R+E +P+ E L +++ M+YL E+ +H
Sbjct: 86 --LVMEMAGGGP---LHKFLVGKREE--IPVSNVAELLH---QVSMGMKYLEEKN--FVH 133
Query: 330 RDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------FVYMAPEVIQCEPYSEK 383
RDL N+ L + + +I+DFG ++ L + T + APE I +S +
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 193
Query: 384 SDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICL 442
SDV+S+G+ + E ++ G PY K K ++ + +GK PE EL L+
Sbjct: 194 SDVWSYGVTMWEALSYGQKPY--KKMKGPEVMAFIEQGKRMECPPECPP---ELYALMSD 248
Query: 443 SWDGDASVRPSFSSI 457
W RP F ++
Sbjct: 249 CWIYKWEDRPDFLTV 263
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 35/294 (11%)
Query: 191 YIDPKEIDLQEKIGQGTTANIYRAIWRGLD-------VAVKCIYPDFFHTNENAVTFFAQ 243
+I I L+ ++G+G ++ A L VAVK + ++NA F +
Sbjct: 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD----ASDNARKDFHR 64
Query: 244 EVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWL--HGLGSQRRKERMVPLP 301
E + L+ +H +++ G C+E + + L ++L HG + E P
Sbjct: 65 EAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGN---P 121
Query: 302 PFEERLARALEIAQ----AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS 357
P E ++ L IAQ M YL Q +HRDL N + + V+I DFG +R +
Sbjct: 122 PTELTQSQMLHIAQQIAAGMVYLASQH--FVHRDLATRNCLVGENLLVKIGDFGMSRDVY 179
Query: 358 DGEMALTGTFV-----YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPA 411
+ G +M PE I ++ +SDV+S G++L EI T G P+ +
Sbjct: 180 STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 239
Query: 412 KIAMEVGEGKLRP-ALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ G RP P+ E+ EL+ W + +R + I L+N+
Sbjct: 240 IECITQGRVLQRPRTCPQ------EVYELMLGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 243 QEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP 302
+E+ L RH +++L ++ +V E G L +++ QR K
Sbjct: 63 REISYLRLLRHPHIIKLYDV-IKSKDEIIMVIEYAGNELFDYI----VQRDK-------- 109
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
E+ AR +I A++Y H K ++HRDLKP N+ LD+ +V+IADFG + ++DG
Sbjct: 110 MSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 167
Query: 361 MALT--GTFVYMAPEVIQCEPYS-EKSDVYSFGIILNEIITGNHPY 403
T G+ Y APEVI + Y+ + DV+S G+IL ++ P+
Sbjct: 168 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 213
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 243 QEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP 302
+E+ L RH +++L ++ +V E G L +++ QR K
Sbjct: 53 REISYLRLLRHPHIIKLYDV-IKSKDEIIMVIEYAGNELFDYI----VQRDK-------- 99
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
E+ AR +I A++Y H K ++HRDLKP N+ LD+ +V+IADFG + ++DG
Sbjct: 100 MSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 157
Query: 361 MALT--GTFVYMAPEVIQCEPYS-EKSDVYSFGIILNEIITGNHPY 403
T G+ Y APEVI + Y+ + DV+S G+IL ++ P+
Sbjct: 158 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 203
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 201 EKIGQGTTANIYRA--IWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIGQG + +Y A + G +VA++ +++ + + ++
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIR-------------------QMNLQQQPKKELIIN 66
Query: 259 ---LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL-EIA 314
+M P +L + L+G L + L + + E ++A E
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 126
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS---DGEMALTGTFVYMA 371
QA+++LH + VIHRD+K NI L V++ DFG ++ + GT +MA
Sbjct: 127 QALEFLHSNQ--VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMA 184
Query: 372 PEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKD 407
PEV+ + Y K D++S GI+ E+I G PY+ ++
Sbjct: 185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 20/166 (12%)
Query: 243 QEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP 302
+E+ L RH +++L ++ +V E G L +++ QR K
Sbjct: 57 REISYLRLLRHPHIIKLYDV-IKSKDEIIMVIEYAGNELFDYI----VQRDK-------- 103
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
E+ AR +I A++Y H K ++HRDLKP N+ LD+ +V+IADFG + ++DG
Sbjct: 104 MSEQEARRFFQQIISAVEYCHRHK--IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 161
Query: 361 MALT--GTFVYMAPEVIQCEPYS-EKSDVYSFGIILNEIITGNHPY 403
T G+ Y APEVI + Y+ + DV+S G+IL ++ P+
Sbjct: 162 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPF 207
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 28/182 (15%)
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG------- 359
L A +I + M YLH Q IHR L N+ LD+ + V+I DFG A+ + +G
Sbjct: 115 LLFAQQICEGMAYLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 172
Query: 360 EMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKP-AKIAMEVG 418
E + F Y APE ++ + SDV+SFG+ L E++T Y + + P K +G
Sbjct: 173 EDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLT----YCDSNQSPHTKFTELIG 227
Query: 419 --EGKLR-----------PALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQ 465
+G++ LP D E+ L+ W+ +AS RP+F ++ L+ Q
Sbjct: 228 HTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQ 287
Query: 466 MK 467
K
Sbjct: 288 EK 289
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 126/284 (44%), Gaps = 61/284 (21%)
Query: 183 SQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTF 240
S+ MN D++E++G+G + + R + + GL+ A K I N
Sbjct: 17 SEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKII---------NTKKL 67
Query: 241 FAQEVDTLSRQ-------RHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQR 292
A++ L R+ +H +++L + E + +LV +L+ G L
Sbjct: 68 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH-YLVFDLVTGGEL----------- 115
Query: 293 RKERMVPLPPFEERLARAL-----------EIAQAMQYLHEQKPKVIHRDLKPSNIFLDD 341
FE+ +AR +I +++ Y H ++HR+LKP N+ L
Sbjct: 116 ----------FEDIVAREFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLAS 163
Query: 342 ---AKHVRIADFGHARFLSDGEM--ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEI 396
V++ADFG A ++D E GT Y++PEV++ +PYS+ D+++ G+IL +
Sbjct: 164 KAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYIL 223
Query: 397 ITGNHPYIEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELI 440
+ G P+ ++D ++ ++ G PE D E LI
Sbjct: 224 LVGYPPFWDEDQH--RLYAQIKAGAYDYPSPEWDTVTPEAKSLI 265
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE 360
F E AR A +I +YLH +I+RDLKP N+ +D ++++ DFG A+ +
Sbjct: 138 FSEPHARFYAAQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
Query: 361 MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
L GT +APE+I + Y++ D ++ G+++ E+ G P+ +P +I ++ G
Sbjct: 196 WXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFAD--QPIQIYEKIVSG 253
Query: 421 KLR 423
K+R
Sbjct: 254 KVR 256
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 28/182 (15%)
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG------- 359
L A +I + M YLH Q IHR L N+ LD+ + V+I DFG A+ + +G
Sbjct: 114 LLFAQQICEGMAYLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 171
Query: 360 EMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKP-AKIAMEVG 418
E + F Y APE ++ + SDV+SFG+ L E++T Y + + P K +G
Sbjct: 172 EDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLT----YCDSNQSPHTKFTELIG 226
Query: 419 --EGKLR-----------PALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQ 465
+G++ LP D E+ L+ W+ +AS RP+F ++ L+ Q
Sbjct: 227 HTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQTAQ 286
Query: 466 MK 467
K
Sbjct: 287 EK 288
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 26/195 (13%)
Query: 221 VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELL-GT 279
VA+KCI + E ++ E+ L + +H ++ L E +L+ +L+ G
Sbjct: 46 VAIKCIAKEALEGKEGSME---NEIAVLHKIKHPNIVAL-DDIYESGGHLYLIMQLVSGG 101
Query: 280 TLKEWL--HGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNI 337
L + + G ++R R++ ++ A++YLH+ ++HRDLKP N+
Sbjct: 102 ELFDRIVEKGFYTERDASRLI------------FQVLDAVKYLHDLG--IVHRDLKPENL 147
Query: 338 F---LDDAKHVRIADFGHARFLSDGEMALT--GTFVYMAPEVIQCEPYSEKSDVYSFGII 392
LD+ + I+DFG ++ G + T GT Y+APEV+ +PYS+ D +S G+I
Sbjct: 148 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 393 LNEIITGNHPYIEKD 407
++ G P+ +++
Sbjct: 208 AYILLCGYPPFYDEN 222
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 33/287 (11%)
Query: 192 IDPKEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
ID K+++ K+ + + +++ W+G D+ VK + + T ++ F +E L
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRD--FNEECPRLRIF 64
Query: 252 RHRFVLQLMGACLEPP------YRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEE 305
H VL ++GAC PP W L L E + + Q + +
Sbjct: 65 SHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKF-------- 116
Query: 306 RLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRI--ADFGHARFLSDGEMAL 363
AL+ A+ +LH +P + L ++ +D+ RI AD + F S G
Sbjct: 117 ----ALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFS-FQSPGRXYA 171
Query: 364 TGTFVYMAPEVIQCEPYS---EKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEG 420
++APE +Q +P +D +SF ++L E++T P+ D +I +V
Sbjct: 172 PA---WVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPF--ADLSNXEIGXKVALE 226
Query: 421 KLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNIQMK 467
LRP +P + IC + D + RP F I L+ Q K
Sbjct: 227 GLRPTIPPGISPHVSKLXKICX--NEDPAKRPKFDXIVPILEKXQDK 271
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 69
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E + LK+++ +PLP + L ++ Q +
Sbjct: 70 LLD-VIHTENKLYLVFEHVDQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 120
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T Y APE+
Sbjct: 121 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEIL 178
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ C+ YS D++S G I E++T
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 14/107 (13%)
Query: 306 RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--A 362
++ RAL E+ A+ L+ ++HRDLKP NI LDD ++++ DFG + L GE
Sbjct: 115 KIMRALLEVICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 169
Query: 363 LTGTFVYMAPEVIQCE------PYSEKSDVYSFGIILNEIITGNHPY 403
+ GT Y+APE+I+C Y ++ D++S G+I+ ++ G+ P+
Sbjct: 170 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 19/172 (11%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
+ M+YL + +HRDL N+ +D +++DFG +R L D A T
Sbjct: 160 VGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIP 217
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ APE I +S SDV+SFG+++ E++ G PY + ++E G
Sbjct: 218 IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY-----R 272
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI-----QMKVTETI 472
LP G L +L+ W D + RP FS I L + ++ T T+
Sbjct: 273 LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRATATV 324
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 19/172 (11%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG-EMALTGT----- 366
+ M+YL + +HRDL N+ +D +++DFG +R L D + A T T
Sbjct: 160 VGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIP 217
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ APE I +S SDV+SFG+++ E++ G PY + ++E G
Sbjct: 218 IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY-----R 272
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI-----QMKVTETI 472
LP G L +L+ W D + RP FS I L + ++ T T+
Sbjct: 273 LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRATATV 324
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 26/195 (13%)
Query: 221 VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELL-GT 279
VA+KCI + E ++ E+ L + +H ++ L E +L+ +L+ G
Sbjct: 46 VAIKCIAKEALEGKEGSME---NEIAVLHKIKHPNIVAL-DDIYESGGHLYLIMQLVSGG 101
Query: 280 TLKEWL--HGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNI 337
L + + G ++R R++ ++ A++YLH+ ++HRDLKP N+
Sbjct: 102 ELFDRIVEKGFYTERDASRLI------------FQVLDAVKYLHDLG--IVHRDLKPENL 147
Query: 338 F---LDDAKHVRIADFGHARFLSDGEMALT--GTFVYMAPEVIQCEPYSEKSDVYSFGII 392
LD+ + I+DFG ++ G + T GT Y+APEV+ +PYS+ D +S G+I
Sbjct: 148 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 393 LNEIITGNHPYIEKD 407
++ G P+ +++
Sbjct: 208 AYILLCGYPPFYDEN 222
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 40/221 (18%)
Query: 200 QEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVL 257
Q ++G+G+ ++R + G AVK + + F E LS R ++
Sbjct: 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVA------CAGLSSPR---IV 113
Query: 258 QLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER----LARALEI 313
L GA E P+ + L G +L + + +G LP E+R L +ALE
Sbjct: 114 PLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC---------LP--EDRALYYLGQALE- 161
Query: 314 AQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSD---GEMALTGTFV- 368
++YLH ++ ++H D+K N+ L D + DFGHA L G+ LTG ++
Sbjct: 162 --GLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 217
Query: 369 ----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIE 405
+MAPEV+ +P K D++S ++ ++ G HP+ +
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 258
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA-RFLSDGE--MALTGTFV 368
+I QYLH + VIHRDLK N+FL++ V+I DFG A + DGE L GT
Sbjct: 149 QIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN 206
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APEV+ + +S + DV+S G I+ ++ G P+
Sbjct: 207 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 241
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 66
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 67 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 117
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T T Y APE+
Sbjct: 118 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 175
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ + YS D++S G I E++T
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 26/195 (13%)
Query: 221 VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELL-GT 279
VA+KCI + E ++ E+ L + +H ++ L E +L+ +L+ G
Sbjct: 46 VAIKCIAKEALEGKEGSME---NEIAVLHKIKHPNIVAL-DDIYESGGHLYLIMQLVSGG 101
Query: 280 TLKEWL--HGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNI 337
L + + G ++R R++ ++ A++YLH+ ++HRDLKP N+
Sbjct: 102 ELFDRIVEKGFYTERDASRLI------------FQVLDAVKYLHDLG--IVHRDLKPENL 147
Query: 338 F---LDDAKHVRIADFGHARFLSDGEMALT--GTFVYMAPEVIQCEPYSEKSDVYSFGII 392
LD+ + I+DFG ++ G + T GT Y+APEV+ +PYS+ D +S G+I
Sbjct: 148 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 393 LNEIITGNHPYIEKD 407
++ G P+ +++
Sbjct: 208 AYILLCGYPPFYDEN 222
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA-RFLSDGE--MALTGTFV 368
+I QYLH + VIHRDLK N+FL++ V+I DFG A + DGE L GT
Sbjct: 125 QIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN 182
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APEV+ + +S + DV+S G I+ ++ G P+
Sbjct: 183 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 18/180 (10%)
Query: 236 NAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRK 294
+ V +E+ L RH +++L + P ++V E + G L +++ G K
Sbjct: 58 DVVGKIRREIQNLKLFRHPHIIKLY-QVISTPSDIFMVMEYVSGGELFDYICKNGRLDEK 116
Query: 295 ERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR 354
E RL + +I + Y H V+HRDLKP N+ LD + +IADFG +
Sbjct: 117 E--------SRRLFQ--QILSGVDYCHRHM--VVHRDLKPENVLLDAHMNAKIADFGLSN 164
Query: 355 FLSDGEM--ALTGTFVYMAPEVIQCEPYS-EKSDVYSFGIILNEIITGNHPYIEKDYKPA 411
+SDGE G+ Y APEVI Y+ + D++S G+IL ++ G P+ + D+ P
Sbjct: 165 MMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF-DDDHVPT 223
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 62/101 (61%), Gaps = 5/101 (4%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDGEMALT--GTFV 368
EI+ A+ +LH++ +I+RDLKP NI L+ HV++ DFG + + DG + T GT
Sbjct: 129 EISMALGHLHQKG--IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIE 186
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
YMAPE++ ++ D +S G ++ +++TG P+ ++ K
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK 227
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA-RFLSDGE--MALTGTFV 368
+I QYLH + VIHRDLK N+FL++ V+I DFG A + DGE L GT
Sbjct: 147 QIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN 204
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APEV+ + +S + DV+S G I+ ++ G P+
Sbjct: 205 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 239
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA-RFLSDGE--MALTGTFV 368
+I QYLH + VIHRDLK N+FL++ V+I DFG A + DGE L GT
Sbjct: 125 QIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN 182
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APEV+ + +S + DV+S G I+ ++ G P+
Sbjct: 183 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA-RFLSDGE--MALTGTFV 368
+I QYLH + VIHRDLK N+FL++ V+I DFG A + DGE L GT
Sbjct: 129 QIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN 186
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APEV+ + +S + DV+S G I+ ++ G P+
Sbjct: 187 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 221
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 201 EKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +Y+A + G VA+K I D E + +E+ L H +++
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNHPNIVK 73
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L+ + + +LV E L LK+++ +PLP + L ++ Q +
Sbjct: 74 LLD-VIHTENKLYLVFEFLHQDLKKFMDASALTG-----IPLPLIKSYL---FQLLQGLA 124
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAPEV- 374
+ H + V+HRDLKP N+ ++ +++ADFG AR T T Y APE+
Sbjct: 125 FCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL 182
Query: 375 IQCEPYSEKSDVYSFGIILNEIIT 398
+ + YS D++S G I E++T
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 40/221 (18%)
Query: 200 QEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVL 257
Q ++G+G+ ++R + G AVK + + F E LS R ++
Sbjct: 79 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVAC------AGLSSPR---IV 129
Query: 258 QLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER----LARALEI 313
L GA E P+ + L G +L + + +G LP E+R L +ALE
Sbjct: 130 PLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC---------LP--EDRALYYLGQALE- 177
Query: 314 AQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSD---GEMALTGTFV- 368
++YLH ++ ++H D+K N+ L D + DFGHA L G+ LTG ++
Sbjct: 178 --GLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 233
Query: 369 ----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIE 405
+MAPEV+ +P K D++S ++ ++ G HP+ +
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 274
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 97/195 (49%), Gaps = 26/195 (13%)
Query: 221 VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELL-GT 279
VA+KCI E ++ E+ L + +H ++ L E +L+ +L+ G
Sbjct: 46 VAIKCIAKKALEGKEGSME---NEIAVLHKIKHPNIVAL-DDIYESGGHLYLIMQLVSGG 101
Query: 280 TLKEWL--HGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNI 337
L + + G ++R R++ ++ A++YLH+ ++HRDLKP N+
Sbjct: 102 ELFDRIVEKGFYTERDASRLI------------FQVLDAVKYLHDLG--IVHRDLKPENL 147
Query: 338 F---LDDAKHVRIADFGHARFLSDGEMALT--GTFVYMAPEVIQCEPYSEKSDVYSFGII 392
LD+ + I+DFG ++ G + T GT Y+APEV+ +PYS+ D +S G+I
Sbjct: 148 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 393 LNEIITGNHPYIEKD 407
++ G P+ +++
Sbjct: 208 AYILLCGYPPFYDEN 222
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 14/107 (13%)
Query: 306 RLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEM--A 362
++ RAL E+ A+ L+ ++HRDLKP NI LDD ++++ DFG + L GE
Sbjct: 128 KIMRALLEVICALHKLN-----IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE 182
Query: 363 LTGTFVYMAPEVIQCE------PYSEKSDVYSFGIILNEIITGNHPY 403
+ GT Y+APE+I+C Y ++ D++S G+I+ ++ G+ P+
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 5/95 (5%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA-RFLSDGE--MALTGTFV 368
+I QYLH + VIHRDLK N+FL++ V+I DFG A + DGE L GT
Sbjct: 123 QIVLGCQYLHRNR--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN 180
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APEV+ + +S + DV+S G I+ ++ G P+
Sbjct: 181 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 215
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
IG G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 92
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 141
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 142 GLKYIH--SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIM 199
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 40/221 (18%)
Query: 200 QEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVL 257
Q ++G+G+ ++R + G AVK + + F E LS R ++
Sbjct: 77 QPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVA------CAGLSSPR---IV 127
Query: 258 QLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER----LARALEI 313
L GA E P+ + L G +L + + +G LP E+R L +ALE
Sbjct: 128 PLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC---------LP--EDRALYYLGQALE- 175
Query: 314 AQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSD---GEMALTGTFV- 368
++YLH ++ ++H D+K N+ L D + DFGHA L G+ LTG ++
Sbjct: 176 --GLEYLHTRR--ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIP 231
Query: 369 ----YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIE 405
+MAPEV+ +P K D++S ++ ++ G HP+ +
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 272
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDGEMA--LTGTFV 368
EI+ A+ +LH++ +I+RDLKP NI L+ HV++ DFG + + DG + GT
Sbjct: 129 EISMALGHLHQKG--IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIE 186
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
YMAPE++ ++ D +S G ++ +++TG P+ ++ K
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK 227
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 102/244 (41%), Gaps = 48/244 (19%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHR 254
+++ L E +G+G ++R +W G VAVK F + + F E+ RH
Sbjct: 8 RQVALVECVGKGRYGEVWRGLWHGESVAVK-----IFSSRDEQSWFRETEIYNTVLLRHD 62
Query: 255 FVLQLMGACL---EPPYRGWLVTELLGTTLKEWLHGLGS-QRRKERMVPLPPFEERLARA 310
+L + + + + WL+T H GS +R P RL A
Sbjct: 63 NILGFIASDMTSRNSSTQLWLITH---------YHEHGSLYDFLQRQTLEPHLALRL--A 111
Query: 311 LEIAQAMQYLH------EQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA-------RFLS 357
+ A + +LH + KP + HRD K N+ + IAD G A +L
Sbjct: 112 VSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLD 171
Query: 358 DGEMALTGTFVYMAPEVI------QCEPYSEKSDVYSFGIILNE-----IITGNHPYIEK 406
G GT YMAPEV+ C + +D+++FG++L E I+ G I +
Sbjct: 172 IGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNG----IVE 227
Query: 407 DYKP 410
DY+P
Sbjct: 228 DYRP 231
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 36/276 (13%)
Query: 203 IGQGTTANIYRAIW--RGLDVAVKCIYPDFFH-TNENAVTFFAQEVDTLSRQRHRFVLQL 259
+ G +Y+ +W G V + + T+ A E ++ + V +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 260 MGACLEPPYRGWLVTELL--GTTL---KEWLHGLGSQRRKERMVPLPPFEERLARALEIA 314
+G CL + L+ +L+ G L +E +GSQ L ++IA
Sbjct: 90 LGICLTSTVQ--LIMQLMPFGCLLDYVREHKDNIGSQYL-------------LNWCVQIA 134
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS--DGEMALTGTFV---Y 369
+ M YL +++ ++HRDL N+ + +HV+I DFG A+ L + E G V +
Sbjct: 135 KGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
MA E I Y+ +SDV+S+G+ + E++T G+ PY D PA + E R LP+
Sbjct: 193 MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY---DGIPASEISSILEKGER--LPQ 247
Query: 429 EDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
++ ++ W DA RP F + +
Sbjct: 248 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 283
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + SQ+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKSQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG R D T Y APE+
Sbjct: 137 GLKYIH--SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 201 EKIGQGTTANIYRA--IWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIGQG + +Y A + G +VA++ +++ + + ++
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIR-------------------QMNLQQQPKKELIIN 67
Query: 259 ---LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL-EIA 314
+M P +L + L+G L + L + + E ++A E
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL 127
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS---DGEMALTGTFVYMA 371
QA+++LH + VIHR++K NI L V++ DFG ++ + GT +MA
Sbjct: 128 QALEFLHSNQ--VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMA 185
Query: 372 PEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKD 407
PEV+ + Y K D++S GI+ E+I G PY+ ++
Sbjct: 186 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 221
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL-SDGEMALTGT-- 366
+ ++A+ M +L + IHRDL NI L + +I DFG AR + +D + G
Sbjct: 174 SYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNAR 231
Query: 367 --FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY--IEKDYKPAKIAMEVGEGK 421
+MAPE I Y+ +SDV+S+GI L E+ + G+ PY + D K K+ + EG
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM---IKEG- 287
Query: 422 LRPALPEEDGQLRELIELICLSWDGDASVRPSFSSIT 458
R PE E+ +++ WD D RP+F I
Sbjct: 288 FRMLSPEHAPA--EMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 93
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 142
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 143 GLKYIH--SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIM 200
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 89
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 138
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 139 GLKYIH--SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIM 196
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 122/269 (45%), Gaps = 61/269 (22%)
Query: 198 DLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ---- 251
D++E++G+G + + R + + GL+ A K I N A++ L R+
Sbjct: 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKII---------NTKKLSARDFQKLEREARIC 59
Query: 252 ---RHRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
+H +++L + E + +LV +L+ G L FE+ +
Sbjct: 60 RKLQHPNIVRLHDSIQEESFH-YLVFDLVTGGEL---------------------FEDIV 97
Query: 308 ARAL-----------EIAQAMQYLHEQKPKVIHRDLKPSNIFLDD---AKHVRIADFGHA 353
AR +I +++ Y H ++HR+LKP N+ L V++ADFG A
Sbjct: 98 AREFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLA 155
Query: 354 RFLSDGEM--ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPA 411
++D E GT Y++PEV++ +PYS+ D+++ G+IL ++ G P+ ++D
Sbjct: 156 IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-- 213
Query: 412 KIAMEVGEGKLRPALPEEDGQLRELIELI 440
++ ++ G PE D E LI
Sbjct: 214 RLYAQIKAGAYDYPSPEWDTVTPEAKSLI 242
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG----HARFLSDGEMALTGTFVYMA 371
A+ YLH+ K +IHRDLK NI +++ADFG + R + GT +MA
Sbjct: 120 ALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMA 177
Query: 372 PEVIQCE-----PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGK 421
PEV+ CE PY K+DV+S GI L E+ P+ E P ++ +++ + +
Sbjct: 178 PEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE--LNPMRVLLKIAKSE 230
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 303 FEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR---FLS 357
F E AR A EIA A+ YLH +++RDLKP NI LD H+ + DFG + +
Sbjct: 136 FLEPRARFYAAEIASALGYLHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193
Query: 358 DGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKD 407
GT Y+APEV+ +PY D + G +L E++ G P+ ++
Sbjct: 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN 243
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKXQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 137 GLKYIH--SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 92
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 141
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 142 GLKYIH--SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIM 199
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
IA M+YL + +HRDL NI ++ +++DFG AR L D A T
Sbjct: 156 IASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIP 213
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ +PE I ++ SDV+S+GI+L E+++ G PY E + + V EG P
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGYRLPP 271
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ L +L+ L C W D + RP F I L +
Sbjct: 272 PMDCPAALYQLM-LDC--WQKDRNNRPKFEQIVSILDKL 307
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 98
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 147
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 148 GLKYIH--SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIM 205
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 59/268 (22%)
Query: 198 DLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ---- 251
D++E++G+G + + R + + GL+ A K I N A++ L R+
Sbjct: 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKII---------NTKKLSARDFQKLEREARIC 59
Query: 252 ---RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLA 308
+H +++L + E + + + G L FE+ +A
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---------------------FEDIVA 98
Query: 309 RAL-----------EIAQAMQYLHEQKPKVIHRDLKPSNIFLDD---AKHVRIADFGHAR 354
R +I +++ Y H ++HR+LKP N+ L V++ADFG A
Sbjct: 99 REFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
Query: 355 FLSDGEM--ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAK 412
++D E GT Y++PEV++ +PYS+ D+++ G+IL ++ G P+ ++D +
Sbjct: 157 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--R 214
Query: 413 IAMEVGEGKLRPALPEEDGQLRELIELI 440
+ ++ G PE D E LI
Sbjct: 215 LYAQIKAGAYDYPSPEWDTVTPEAKSLI 242
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 59/268 (22%)
Query: 198 DLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ---- 251
D++E++G+G + + R + + GL+ A K I N A++ L R+
Sbjct: 8 DVKEELGKGAFSVVRRCVHKTTGLEFAAKII---------NTKKLSARDFQKLEREARIC 58
Query: 252 ---RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLA 308
+H +++L + E + + + G L FE+ +A
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL---------------------FEDIVA 97
Query: 309 RAL-----------EIAQAMQYLHEQKPKVIHRDLKPSNIFLDD---AKHVRIADFGHAR 354
R +I +++ Y H ++HR+LKP N+ L V++ADFG A
Sbjct: 98 REFYSEADASHCIQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLAI 155
Query: 355 FLSDGEM--ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAK 412
++D E GT Y++PEV++ +PYS+ D+++ G+IL ++ G P+ ++D +
Sbjct: 156 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--R 213
Query: 413 IAMEVGEGKLRPALPEEDGQLRELIELI 440
+ ++ G PE D E LI
Sbjct: 214 LYAQIKAGAYDYPSPEWDTVTPEAKSLI 241
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 99
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 148
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 149 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 206
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 94
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 143
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR +D T Y APE+
Sbjct: 144 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIM 201
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 94
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 143
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR +D T Y APE+
Sbjct: 144 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIM 201
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 137 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNAMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 112/258 (43%), Gaps = 25/258 (9%)
Query: 191 YIDPKEIDLQEKIGQGTTANIYRAIWRGLD-------VAVKCIYPDFFHTNENAVTFFAQ 243
+I ++I L+ ++G+G ++ A L VAVK + +E+A F +
Sbjct: 37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK----EASESARQDFQR 92
Query: 244 EVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR----KERMVP 299
E + L+ +H+ +++ G C E + + L +L G + E + P
Sbjct: 93 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 152
Query: 300 LP-PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P + LA A ++A M YL +HRDL N + V+I DFG +R +
Sbjct: 153 GPLGLGQLLAVASQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 210
Query: 359 GEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAK 412
+ G +M PE I ++ +SDV+SFG++L EI T G P+ + A
Sbjct: 211 TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 270
Query: 413 IAMEVGEGKLRP-ALPEE 429
+ G RP A P E
Sbjct: 271 DCITQGRELERPRACPPE 288
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 94
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 143
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR +D T Y APE+
Sbjct: 144 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIM 201
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 109/244 (44%), Gaps = 31/244 (12%)
Query: 164 HRYCSQTPLLQQSDLAVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAI--WRGLDV 221
H + + P + +L T+ W + P+ +G G ++ A GL V
Sbjct: 5 HHHSQERPTFYRQELNKTI-------WEV-PERYQNLSPVGSGAYGSVCAAFDTKTGLRV 56
Query: 222 AVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGA-----CLEPPYRGWLVTEL 276
AVK + F T+ +E+ L +H V+ L+ LE +LVT L
Sbjct: 57 AVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 114
Query: 277 LGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSN 336
+G L + + Q+ + V ++ I + ++Y+H +IHRDLKPSN
Sbjct: 115 MGADLN---NIVKCQKLTDDHVQFLIYQ--------ILRGLKYIH--SADIIHRDLKPSN 161
Query: 337 IFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV-IQCEPYSEKSDVYSFGIILNE 395
+ +++ ++I DFG AR D T Y APE+ + Y++ D++S G I+ E
Sbjct: 162 LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 396 IITG 399
++TG
Sbjct: 222 LLTG 225
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
IA M+YL E +HRDL NI ++ +++DFG +RFL + T T
Sbjct: 127 IASGMRYLAEMS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGK 184
Query: 367 --FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLR 423
+ APE I ++ SD +S+GI++ E+++ G PY + + A+E +
Sbjct: 185 IPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE--QDYRL 242
Query: 424 PALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P P+ L +L+ L C W D + RP F + +L +
Sbjct: 243 PPPPDCPTSLHQLM-LDC--WQKDRNARPRFPQVVSALDKM 280
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
IA M+YL E +HRDL NI ++ +++DFG +RFL + T T
Sbjct: 125 IASGMRYLAEMS--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGK 182
Query: 367 --FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLR 423
+ APE I ++ SD +S+GI++ E+++ G PY + + A+E +
Sbjct: 183 IPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE--QDYRL 240
Query: 424 PALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P P+ L +L+ L C W D + RP F + +L +
Sbjct: 241 PPPPDCPTSLHQLM-LDC--WQKDRNARPRFPQVVSALDKM 278
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 16/161 (9%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV---- 368
IA M+YL + +HRDL NI ++ +++DFG +RFL D T T
Sbjct: 144 IAAGMKYLADMN--YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGK 201
Query: 369 ----YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLR 423
+ APE IQ ++ SDV+S+GI++ E+++ G PY + + A+E + +L
Sbjct: 202 IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE-QDYRLP 260
Query: 424 PALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P + L +L+ W D + RP F I +L +
Sbjct: 261 PPMDCPSA----LHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL-SDGEMALTGT-- 366
+ ++A+ M +L + IHRDL NI L + +I DFG AR + +D + G
Sbjct: 167 SYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 224
Query: 367 --FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY--IEKDYKPAKIAMEVGEGK 421
+MAPE I Y+ +SDV+S+GI L E+ + G+ PY + D K K+ + EG
Sbjct: 225 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM---IKEG- 280
Query: 422 LRPALPEEDGQLRELIELICLSWDGDASVRPSFSSIT 458
R PE E+ +++ WD D RP+F I
Sbjct: 281 FRMLSPEHAPA--EMYDIMKTCWDADPLKRPTFKQIV 315
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
IA M+YL + +HRDL NI ++ +++DFG +R L D A T
Sbjct: 156 IASGMKYLSDMG--AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ +PE I ++ SDV+S+GI+L E+++ G PY E + + V EG P
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGYRLPP 271
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ L +L+ L C W D + RP F I L +
Sbjct: 272 PMDCPAALYQLM-LDC--WQKDRNNRPKFEQIVSILDKL 307
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 76/173 (43%), Gaps = 17/173 (9%)
Query: 236 NAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKE 295
N V +E+ + H F++ L + + +V LLG L+ H + KE
Sbjct: 57 NEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLR--YHLQQNVHFKE 114
Query: 296 RMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
V L E+ A+ YL Q+ +IHRD+KP NI LD+ HV I DF A
Sbjct: 115 ETVKL--------FICELVMALDYLQNQR--IIHRDMKPDNILLDEHGHVHITDFNIAAM 164
Query: 356 LSDGEMALT--GTFVYMAPEVIQCEP---YSEKSDVYSFGIILNEIITGNHPY 403
L T GT YMAPE+ YS D +S G+ E++ G PY
Sbjct: 165 LPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPY 217
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 137 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 110
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 159
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 160 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIM 217
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 137 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 112/258 (43%), Gaps = 25/258 (9%)
Query: 191 YIDPKEIDLQEKIGQGTTANIYRAIWRGLD-------VAVKCIYPDFFHTNENAVTFFAQ 243
+I ++I L+ ++G+G ++ A L VAVK + +E+A F +
Sbjct: 8 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK----EASESARQDFQR 63
Query: 244 EVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR----KERMVP 299
E + L+ +H+ +++ G C E + + L +L G + E + P
Sbjct: 64 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 123
Query: 300 LP-PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P + LA A ++A M YL +HRDL N + V+I DFG +R +
Sbjct: 124 GPLGLGQLLAVASQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 181
Query: 359 GEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAK 412
+ G +M PE I ++ +SDV+SFG++L EI T G P+ + A
Sbjct: 182 TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 241
Query: 413 IAMEVGEGKLRP-ALPEE 429
+ G RP A P E
Sbjct: 242 DCITQGRELERPRACPPE 259
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL-SDGEMALTGT-- 366
+ ++A+ M +L + IHRDL NI L + +I DFG AR + +D + G
Sbjct: 174 SYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 231
Query: 367 --FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY--IEKDYKPAKIAMEVGEGK 421
+MAPE I Y+ +SDV+S+GI L E+ + G+ PY + D K K+ + EG
Sbjct: 232 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM---IKEG- 287
Query: 422 LRPALPEEDGQLRELIELICLSWDGDASVRPSFSSIT 458
R PE E+ +++ WD D RP+F I
Sbjct: 288 FRMLSPEHAPA--EMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKXQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 137 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL-SDGEMALTGT-- 366
+ ++A+ M +L + IHRDL NI L + +I DFG AR + +D + G
Sbjct: 169 SYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 226
Query: 367 --FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY--IEKDYKPAKIAMEVGEGK 421
+MAPE I Y+ +SDV+S+GI L E+ + G+ PY + D K K+ + EG
Sbjct: 227 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM---IKEG- 282
Query: 422 LRPALPEEDGQLRELIELICLSWDGDASVRPSFSSIT 458
R PE E+ +++ WD D RP+F I
Sbjct: 283 FRMLSPEHAPA--EMYDIMKTCWDADPLKRPTFKQIV 317
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 16/157 (10%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL-SDGEMALTGT-- 366
+ ++A+ M +L + IHRDL NI L + +I DFG AR + +D + G
Sbjct: 151 SYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 208
Query: 367 --FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY--IEKDYKPAKIAMEVGEGK 421
+MAPE I Y+ +SDV+S+GI L E+ + G+ PY + D K K+ + EG
Sbjct: 209 LPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM---IKEG- 264
Query: 422 LRPALPEEDGQLRELIELICLSWDGDASVRPSFSSIT 458
R PE E+ +++ WD D RP+F I
Sbjct: 265 FRMLSPEHAPA--EMYDIMKTCWDADPLKRPTFKQIV 299
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 99
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 148
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 149 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 206
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 112/258 (43%), Gaps = 25/258 (9%)
Query: 191 YIDPKEIDLQEKIGQGTTANIYRAIWRGLD-------VAVKCIYPDFFHTNENAVTFFAQ 243
+I ++I L+ ++G+G ++ A L VAVK + +E+A F +
Sbjct: 14 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK----EASESARQDFQR 69
Query: 244 EVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRR----KERMVP 299
E + L+ +H+ +++ G C E + + L +L G + E + P
Sbjct: 70 EAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP 129
Query: 300 LP-PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P + LA A ++A M YL +HRDL N + V+I DFG +R +
Sbjct: 130 GPLGLGQLLAVASQVAAGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS 187
Query: 359 GEMALTGT-----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAK 412
+ G +M PE I ++ +SDV+SFG++L EI T G P+ + A
Sbjct: 188 TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI 247
Query: 413 IAMEVGEGKLRP-ALPEE 429
+ G RP A P E
Sbjct: 248 DCITQGRELERPRACPPE 265
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 99
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 148
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 149 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 206
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 98
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 147
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 148 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 205
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTG 230
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 93
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 142
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 143 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 200
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTG 225
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
IA M+YL + +HRDL NI ++ +++DFG +R L D A T
Sbjct: 156 IASGMKYLSDMG--FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ +PE I ++ SDV+S+GI+L E+++ G PY E + + V EG P
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGYRLPP 271
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ L +L+ L C W D + RP F I L +
Sbjct: 272 PMDCPAALYQLM-LDC--WQKDRNNRPKFEQIVSILDKL 307
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 89
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 138
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 139 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 196
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 27/255 (10%)
Query: 210 NIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYR 269
+YR + +DVA+K + T + +E + + + ++++L+G C
Sbjct: 355 GVYRMRKKQIDVAIKVLKQG---TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALM 411
Query: 270 GWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIH 329
LV E+ G LH +R+E +P+ E L +++ M+YL E+ +H
Sbjct: 412 --LVMEMAGGGP---LHKFLVGKREE--IPVSNVAELLH---QVSMGMKYLEEKN--FVH 459
Query: 330 RDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG------TFVYMAPEVIQCEPYSEK 383
R+L N+ L + + +I+DFG ++ L + T + APE I +S +
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 519
Query: 384 SDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICL 442
SDV+S+G+ + E ++ G PY K K ++ + +GK PE EL L+
Sbjct: 520 SDVWSYGVTMWEALSYGQKPY--KKMKGPEVMAFIEQGKRMECPPECPP---ELYALMSD 574
Query: 443 SWDGDASVRPSFSSI 457
W RP F ++
Sbjct: 575 CWIYKWEDRPDFLTV 589
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 110
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 159
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 160 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 217
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 137 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 137 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
IA M+YL + +HRDL NI ++ +++DFG +R L D A T
Sbjct: 127 IASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ +PE I ++ SDV+S+GI+L E+++ G PY E + + V EG P
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGYRLPP 242
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ L +L+ L C W D + RP F I L +
Sbjct: 243 PMDCPAALYQLM-LDC--WQKDRNNRPKFEQIVSILDKL 278
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 92
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 141
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 142 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 199
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 86
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 87 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 135
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 136 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 193
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 194 LNWMHYNQTVDIWSVGCIMAELLTG 218
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 94
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 143
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 144 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 201
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTG 226
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
IA M+YL + +HRDL NI ++ +++DFG +R L D A T
Sbjct: 127 IASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ +PE I ++ SDV+S+GI+L E+++ G PY E + + V EG P
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGYRLPP 242
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ L +L+ L C W D + RP F I L +
Sbjct: 243 PMDCPAALYQLM-LDC--WQKDRNNRPKFEQIVSILDKL 278
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 137 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 89
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 138
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 139 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 196
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 14/115 (12%)
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG----HARFLSDGEMALTGTFVYMA 371
A+ YLH+ K +IHRDLK NI +++ADFG + R + + + GT +MA
Sbjct: 147 ALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRD-SFIGTPYWMA 203
Query: 372 PEVIQCE-----PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGK 421
PEV+ CE PY K+DV+S GI L E+ P+ E P ++ +++ + +
Sbjct: 204 PEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE--LNPMRVLLKIAKSE 256
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 89
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 138
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 139 GLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 196
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
IA M+YL + +HRDL NI ++ +++DFG +R L D A T
Sbjct: 144 IASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ +PE I ++ SDV+S+GI+L E+++ G PY E + + V EG P
Sbjct: 202 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGYRLPP 259
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ L +L+ L C W D + RP F I L +
Sbjct: 260 PMDCPAALYQLM-LDC--WQKDRNNRPKFEQIVSILDKL 295
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL---TGTFV- 368
IA M+YL + +HRDL NI ++ +++DFG +R + D A+ TG +
Sbjct: 154 IAAGMRYLADMG--YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIP 211
Query: 369 --YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ APE IQ ++ SDV+S+GI++ E+++ G PY + + A+E EG PA
Sbjct: 212 VRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE--EGYRLPA 269
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ L +L+ L C W + + RP F I L +
Sbjct: 270 PMDCPAGLHQLM-LDC--WQKERAERPKFEQIVGILDKM 305
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 106
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 155
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 156 GLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 213
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
IA M+YL + +HRDL NI ++ +++DFG +R L D A T
Sbjct: 154 IASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 211
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ +PE I ++ SDV+S+GI+L E+++ G PY E + + V EG P
Sbjct: 212 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGYRLPP 269
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ L +L+ L C W D + RP F I L +
Sbjct: 270 PMDCPAALYQLM-LDC--WQKDRNNRPKFEQIVSILDKL 305
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
IA M+YL + +HRDL NI ++ +++DFG +R L D A T
Sbjct: 156 IASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ +PE I ++ SDV+S+GI+L E+++ G PY E + + V EG P
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGYRLPP 271
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ L +L+ L C W D + RP F I L +
Sbjct: 272 PMDCPAALYQLM-LDC--WQKDRNNRPKFEQIVSILDKL 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
IA M+YL + +HRDL NI ++ +++DFG +R L D A T
Sbjct: 156 IASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ +PE I ++ SDV+S+GI+L E+++ G PY E + + V EG P
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGYRLPP 271
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ L +L+ L C W D + RP F I L +
Sbjct: 272 PMDCPAALYQLM-LDC--WQKDRNNRPKFEQIVSILDKL 307
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 137 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 107
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 156
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 157 GLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 214
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
IA M+YL + +HRDL NI ++ +++DFG +R L D A T
Sbjct: 156 IASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ +PE I ++ SDV+S+GI+L E+++ G PY E + + V EG P
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGYRLPP 271
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ L +L+ L C W D + RP F I L +
Sbjct: 272 PMDCPAALYQLM-LDC--WQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
IA M+YL + +HRDL NI ++ +++DFG +R L D A T
Sbjct: 156 IASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ +PE I ++ SDV+S+GI+L E+++ G PY E + + V EG P
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGYRLPP 271
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ L +L+ L C W D + RP F I L +
Sbjct: 272 PMDCPAALYQLM-LDC--WQKDRNNRPKFEQIVSILDKL 307
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 137 GLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 92
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 141
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 142 GLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 199
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTG 224
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
IA M+YL + +HRDL NI ++ +++DFG +R L D A T
Sbjct: 156 IASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 213
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ +PE I ++ SDV+S+GI+L E+++ G PY E + + V EG P
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGYRLPP 271
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ L +L+ L C W D + RP F I L +
Sbjct: 272 PMDCPAALYQLM-LDC--WQKDRNNRPKFEQIVSILDKL 307
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 84
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 133
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 134 GLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 191
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 70/135 (51%), Gaps = 15/135 (11%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDD-AKHVRIADFGHARF-LSDGEMALTGTFVY 369
+I + +Q+LH + P +IHRDLK NIF+ V+I D G A + A+ GT +
Sbjct: 137 QILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEF 196
Query: 370 MAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRP----- 424
APE + E Y E DVY+FG E T +PY E A+I V G ++P
Sbjct: 197 XAPEXYE-EKYDESVDVYAFGXCXLEXATSEYPYSECQ-NAAQIYRRVTSG-VKPASFDK 253
Query: 425 -ALPEEDGQLRELIE 438
A+PE ++E+IE
Sbjct: 254 VAIPE----VKEIIE 264
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 137 GLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 130/313 (41%), Gaps = 63/313 (20%)
Query: 191 YIDPKEIDLQEK-------------IGQGTTANIYRAIWRGL-------DVAVKCIYPDF 230
+IDP ++ EK +G G + A GL VAVK +
Sbjct: 29 FIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KST 87
Query: 231 FHTNENAVTFFAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLG 289
H +E E+ +S +H ++ L+GAC G V L+ T + L
Sbjct: 88 AHADEKEA--LMSELKIMSHLGQHENIVNLLGACTH----GGPV--LVITEYCCYGDLLN 139
Query: 290 SQRRKERMVPLPPF----------EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL 339
RRK R++ P + L + ++AQ M +L + IHRD+ N+ L
Sbjct: 140 FLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLL 197
Query: 340 DDAKHVRIADFGHAR-FLSDGEMALTGT----FVYMAPEVIQCEPYSEKSDVYSFGIILN 394
+ +I DFG AR ++D + G +MAPE I Y+ +SDV+S+GI+L
Sbjct: 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 257
Query: 395 EIIT-GNHPY-----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDA 448
EI + G +PY K YK K ++ + P + + ++ W +
Sbjct: 258 EIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAP---------KNIYSIMQACWALEP 308
Query: 449 SVRPSFSSITCSL 461
+ RP+F I CS
Sbjct: 309 THRPTFQQI-CSF 320
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 14/115 (12%)
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG----HARFLSDGEMALTGTFVYMA 371
A+ YLH+ K +IHRDLK NI +++ADFG + R + + + GT +MA
Sbjct: 147 ALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD-SFIGTPYWMA 203
Query: 372 PEVIQCE-----PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGK 421
PEV+ CE PY K+DV+S GI L E+ P+ E P ++ +++ + +
Sbjct: 204 PEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE--LNPMRVLLKIAKSE 256
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 85
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 86 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 134
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 135 GLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 192
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLTG 217
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 193 DPKEI--DLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
DP+++ DL+E IG G+ +Y R + VA+K + +NE +EV L
Sbjct: 51 DPEKLFSDLRE-IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII-KEVRFL 108
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLA 308
+ RH +Q G C + WLV E + LGS + P E +A
Sbjct: 109 QKLRHPNTIQYRG-CYLREHTAWLVME----------YCLGSASDLLEVHKKPLQEVEIA 157
Query: 309 RALEIA-QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTF 367
A Q + YLH +IHRD+K NI L + V++ DFG A ++ GT
Sbjct: 158 AVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN-XFVGTP 214
Query: 368 VYMAPEVIQCEP---YSEKSDVYSFGIILNEI 396
+MAPEVI Y K DV+S GI E+
Sbjct: 215 YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 83
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 132
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 133 GLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 190
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 84
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 133
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y APE+
Sbjct: 134 GLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIM 191
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 130/313 (41%), Gaps = 63/313 (20%)
Query: 191 YIDPKEIDLQEK-------------IGQGTTANIYRAIWRGL-------DVAVKCIYPDF 230
+IDP ++ EK +G G + A GL VAVK +
Sbjct: 29 FIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KST 87
Query: 231 FHTNENAVTFFAQEVDTLSR-QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLG 289
H +E E+ +S +H ++ L+GAC G V L+ T + L
Sbjct: 88 AHADEKEA--LMSELKIMSHLGQHENIVNLLGACTH----GGPV--LVITEYCCYGDLLN 139
Query: 290 SQRRKERMVPLPPF----------EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL 339
RRK R++ P + L + ++AQ M +L + IHRD+ N+ L
Sbjct: 140 FLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLL 197
Query: 340 DDAKHVRIADFGHAR-FLSDGEMALTGT----FVYMAPEVIQCEPYSEKSDVYSFGIILN 394
+ +I DFG AR ++D + G +MAPE I Y+ +SDV+S+GI+L
Sbjct: 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 257
Query: 395 EIIT-GNHPY-----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDA 448
EI + G +PY K YK K ++ + P + + ++ W +
Sbjct: 258 EIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAP---------KNIYSIMQACWALEP 308
Query: 449 SVRPSFSSITCSL 461
+ RP+F I CS
Sbjct: 309 THRPTFQQI-CSF 320
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
IA M+YL + +HRDL NI ++ +++DFG R L D A T
Sbjct: 156 IASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP 213
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ +PE I ++ SDV+S+GI+L E+++ G PY E + + V EG P
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGYRLPP 271
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
+ L +L+ L C W D + RP F I L +
Sbjct: 272 PMDCPAALYQLM-LDC--WQKDRNNRPKFEQIVSILDKL 307
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 8/104 (7%)
Query: 304 EERLARALE-IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG---HARFLSDG 359
E+R A +E +A A+ Y H +K VIHRD+KP N+ L ++IADFG HA L
Sbjct: 122 EQRTATIMEELADALMYCHGKK--VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK 179
Query: 360 EMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
M GT Y+ PE+I+ ++EK D++ G++ E++ GN P+
Sbjct: 180 TMC--GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPF 221
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 24/217 (11%)
Query: 195 KEIDLQEKIGQGTTANIYRA--IWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQR 252
K +L E IG G A + A I G VA+K + + T + + E++ L R
Sbjct: 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKN---TLGSDLPRIKTEIEALKNLR 66
Query: 253 HRFVLQLMGACLEPPYRGWLVTELL-GTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL 311
H+ + QL LE + ++V E G L +++ + R E EE
Sbjct: 67 HQHICQLYHV-LETANKIFMVLEYCPGGELFDYI--ISQDRLSE--------EETRVVFR 115
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGH-ARFLSDGEMAL---TGTF 367
+I A+ Y+H Q HRDLKP N+ D+ +++ DFG A+ + + L G+
Sbjct: 116 QIVSAVAYVHSQG--YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSL 173
Query: 368 VYMAPEVIQCEPY-SEKSDVYSFGIILNEIITGNHPY 403
Y APE+IQ + Y ++DV+S GI+L ++ G P+
Sbjct: 174 AYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF 210
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 14/115 (12%)
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFG----HARFLSDGEMALTGTFVYMA 371
A+ YLH+ K +IHRDLK NI +++ADFG + R + + GT +MA
Sbjct: 147 ALNYLHDNK--IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRD-XFIGTPYWMA 203
Query: 372 PEVIQCE-----PYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGK 421
PEV+ CE PY K+DV+S GI L E+ P+ E P ++ +++ + +
Sbjct: 204 PEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHE--LNPMRVLLKIAKSE 256
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 30/217 (13%)
Query: 203 IGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ AI + G VA+K + F +E +E+ L +H V+ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 261 -----GACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
+ L Y +LV + T L++ + S+ + + +V ++ +
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLV------------YQMLK 155
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV---YMAP 372
++Y+H V+HRDLKP N+ +++ ++I DFG AR +D EM TG V Y AP
Sbjct: 156 GLKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLARH-ADAEM--TGYVVTRWYRAP 210
Query: 373 EVI-QCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
EVI Y++ D++S G I+ E++TG + KDY
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY 247
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHARFLSDGEMAL---TG 365
+I +A++Y H+ +IHRD+KP N+ L +++ V++ DFG A L + + G
Sbjct: 138 QILEALRYCHDNN--IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVG 195
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
T +MAPEV++ EPY + DV+ G+IL +++G P+
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 15/140 (10%)
Query: 271 WLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLAR-ALEIAQAMQYLHEQKPKVIH 329
W+ EL T+L ++ + K + +P E+ L + A+ I +A+++LH K VIH
Sbjct: 109 WICXELXDTSLDKFYKQVID---KGQTIP----EDILGKIAVSIVKALEHLH-SKLSVIH 160
Query: 330 RDLKPSNIFLDDAKHVRIADFGHARFLSD--GEMALTGTFVYMAPEVIQCE----PYSEK 383
RD+KPSN+ ++ V+ DFG + +L D + G Y APE I E YS K
Sbjct: 161 RDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVK 220
Query: 384 SDVYSFGIILNEIITGNHPY 403
SD++S GI E+ PY
Sbjct: 221 SDIWSLGITXIELAILRFPY 240
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 24/212 (11%)
Query: 193 DPKEI--DLQEKIGQGTTANIY--RAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTL 248
DP+++ DL+E IG G+ +Y R + VA+K + +NE +EV L
Sbjct: 12 DPEKLFSDLRE-IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDII-KEVRFL 69
Query: 249 SRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLA 308
+ RH +Q G C + WLV E + LGS + P E +A
Sbjct: 70 QKLRHPNTIQYRG-CYLREHTAWLVME----------YCLGSASDLLEVHKKPLQEVEIA 118
Query: 309 RALEIA-QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTF 367
A Q + YLH +IHRD+K NI L + V++ DFG A ++ GT
Sbjct: 119 AVTHGALQGLAYLHSHN--MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN-XFVGTP 175
Query: 368 VYMAPEVIQCEP---YSEKSDVYSFGIILNEI 396
+MAPEVI Y K DV+S GI E+
Sbjct: 176 YWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 25/150 (16%)
Query: 272 LVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRD 331
L+TEL L E+L ++ E PL + L + +A+Q++H QKP +IHRD
Sbjct: 111 LLTELCKGQLVEFL------KKMESRGPLS-CDTVLKIFYQTCRAVQHMHRQKPPIIHRD 163
Query: 332 LKPSNIFLDDAKHVRIADFGHA---------------RFLSDGEMALTGTFVYMAPEVIQ 376
LK N+ L + +++ DFG A R L + E+ T +Y PE+I
Sbjct: 164 LKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIID 223
Query: 377 CE---PYSEKSDVYSFGIILNEIITGNHPY 403
P EK D+++ G IL + HP+
Sbjct: 224 LYSNFPIGEKQDIWALGCILYLLCFRQHPF 253
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
IA M+YL +HRDL NI ++ +++DFG +R L D A T
Sbjct: 156 IAAGMKYLANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIP 213
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ APE I ++ SDV+SFGI++ E++T G PY E A+ G R
Sbjct: 214 IRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG---FR-- 268
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
LP + +L+ W + + RP F+ I L +
Sbjct: 269 LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 128/306 (41%), Gaps = 53/306 (17%)
Query: 191 YIDPKEIDLQEK-------------IGQGTTANIYRAIWRGL-------DVAVKCIYPDF 230
+IDP ++ EK +G G + A GL VAVK +
Sbjct: 29 FIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KST 87
Query: 231 FHTNENAVTFFAQEVDTLSR-QRHRFVLQLMGACLEP-PYRGWLVTEL--LGTTLKEWLH 286
H +E E+ +S +H ++ L+GAC P ++TE G L
Sbjct: 88 AHADEKEA--LMSELKIMSHLGQHENIVNLLGACTHGGPVL--VITEYCCYGDLLNFLRR 143
Query: 287 GLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVR 346
+ KE PL + L + ++AQ M +L + IHRD+ N+ L + +
Sbjct: 144 KAEADLDKEDGRPLE-LRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAK 200
Query: 347 IADFGHAR-FLSDGEMALTGT----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GN 400
I DFG AR ++D + G +MAPE I Y+ +SDV+S+GI+L EI + G
Sbjct: 201 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 260
Query: 401 HPY-----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFS 455
+PY K YK K ++ + P + + ++ W + + RP+F
Sbjct: 261 NPYPGILVNSKFYKLVKDGYQMAQPAFAP---------KNIYSIMQACWALEPTHRPTFQ 311
Query: 456 SITCSL 461
I CS
Sbjct: 312 QI-CSF 316
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 30/217 (13%)
Query: 203 IGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ AI + G VA+K + F +E +E+ L +H V+ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPF--QSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 261 -----GACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
+ L Y +LV + T L++ + S+ + + +V ++ +
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLV------------YQMLK 137
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV---YMAP 372
++Y+H V+HRDLKP N+ +++ ++I DFG AR +D EM TG V Y AP
Sbjct: 138 GLKYIHS--AGVVHRDLKPGNLAVNEDCELKILDFGLARH-ADAEM--TGYVVTRWYRAP 192
Query: 373 EVI-QCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
EVI Y++ D++S G I+ E++TG + KDY
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY 229
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 128/306 (41%), Gaps = 53/306 (17%)
Query: 191 YIDPKEIDLQEK-------------IGQGTTANIYRAIWRGL-------DVAVKCIYPDF 230
+IDP ++ EK +G G + A GL VAVK +
Sbjct: 21 FIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKML-KST 79
Query: 231 FHTNENAVTFFAQEVDTLSR-QRHRFVLQLMGACLEP-PYRGWLVTEL--LGTTLKEWLH 286
H +E E+ +S +H ++ L+GAC P ++TE G L
Sbjct: 80 AHADEKEA--LMSELKIMSHLGQHENIVNLLGACTHGGPVL--VITEYCCYGDLLNFLRR 135
Query: 287 GLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVR 346
+ KE PL + L + ++AQ M +L + IHRD+ N+ L + +
Sbjct: 136 KAEADLDKEDGRPLE-LRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAK 192
Query: 347 IADFGHAR-FLSDGEMALTGT----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GN 400
I DFG AR ++D + G +MAPE I Y+ +SDV+S+GI+L EI + G
Sbjct: 193 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 252
Query: 401 HPY-----IEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFS 455
+PY K YK K ++ + P + + ++ W + + RP+F
Sbjct: 253 NPYPGILVNSKFYKLVKDGYQMAQPAFAP---------KNIYSIMQACWALEPTHRPTFQ 303
Query: 456 SITCSL 461
I CS
Sbjct: 304 QI-CSF 308
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 194 PKEIDLQEKIGQGTTANIYRA--IWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQ 251
P+ +G G ++ + + GL +AVK + F T+ +E+ L
Sbjct: 50 PERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY--RELRLLKHM 107
Query: 252 RHRFVLQLM-----GACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER 306
+H V+ L+ LE +LVT L+G L + + Q+ + V ++
Sbjct: 108 KHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ-- 162
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT 366
I + ++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T
Sbjct: 163 ------ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVAT 214
Query: 367 FVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITG 399
Y APE+ + Y+ D++S G I+ E++TG
Sbjct: 215 RWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I D+G AR D T Y APE+
Sbjct: 137 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
I+ M+YL + +HRDL NI ++ +++DFG +R L D A T
Sbjct: 133 ISAGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 190
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ APE I ++ SDV+S+GI++ E+++ G PY E + A+E G
Sbjct: 191 IRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGY-----R 245
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
LP L +L+ W + + RP F I L +
Sbjct: 246 LPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 70/116 (60%), Gaps = 10/116 (8%)
Query: 295 ERMVPLPPFEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK---HVRIAD 349
E+++ F+E A + +I + YLH K ++HRD+KP NI L++ +++I D
Sbjct: 135 EQIINRHKFDECDAANIMKQILSGICYLH--KHNIVHRDIKPENILLENKNSLLNIKIVD 192
Query: 350 FGHARFLS-DGEM-ALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
FG + F S D ++ GT Y+APEV++ + Y+EK DV+S G+I+ ++ G P+
Sbjct: 193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 243 QEVDTLSRQRHRFVLQLMGA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM 297
+E+ L +H V+ L+ LE +LVT L+G L + + Q+ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDH 126
Query: 298 VPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS 357
V ++ I + ++Y+H +IHRDLKPSN+ +++ ++I DFG AR
Sbjct: 127 VQFLIYQ--------ILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 358 DGEMALTGTFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITG 399
D T Y APE+ + Y++ D++S G I+ E++TG
Sbjct: 177 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 243 QEVDTLSRQRHRFVLQLMGA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM 297
+E+ L +H V+ L+ LE +LVT L+G L + + Q+ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDH 126
Query: 298 VPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS 357
V ++ I + ++Y+H +IHRDLKPSN+ +++ ++I DFG AR
Sbjct: 127 VQFLIYQ--------ILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 358 DGEMALTGTFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITG 399
D T Y APE+ + Y++ D++S G I+ E++TG
Sbjct: 177 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 298 VPLP--PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
VP P P E ++ + + +LH + V+HRDLKP NI + + +++ADFG AR
Sbjct: 112 VPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARI 169
Query: 356 LSDGEMALTGTFV---YMAPEVIQCEPYSEKSDVYSFGIILNEII 397
S +MALT V Y APEV+ Y+ D++S G I E+
Sbjct: 170 YS-FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 243 QEVDTLSRQRHRFVLQLMGA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM 297
+E+ L +H V+ L+ LE +LVT L+G L + + Q+ +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDH 122
Query: 298 VPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS 357
V ++ I + ++Y+H +IHRDLKPSN+ +++ ++I DFG AR
Sbjct: 123 VQFLIYQ--------ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 172
Query: 358 DGEMALTGTFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITG 399
D T Y APE+ + Y++ D++S G I+ E++TG
Sbjct: 173 DEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 8/107 (7%)
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDG 359
EE + +I + YLH +K + H DLKP NI L D H+++ DFG A + DG
Sbjct: 115 EEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 360 E--MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
+ GT ++APE++ EP ++D++S G+I +++G P++
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 28/231 (12%)
Query: 188 NGWYIDPKEIDLQEKIGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEV 245
W + DLQ +G G + A+ G VA+K +Y F +E +E+
Sbjct: 19 TAWEVRAVYRDLQ-PVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF--QSELFAKRAYREL 75
Query: 246 DTLSRQRHRFVLQLMGA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPL 300
L RH V+ L+ L+ +LV +GT L G + E++
Sbjct: 76 RLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDL-------GKLMKHEKLG-- 126
Query: 301 PPFEERLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDG 359
E+R+ + ++ + ++Y+H +IHRDLKP N+ +++ ++I DFG AR +D
Sbjct: 127 ---EDRIQFLVYQMLKGLRYIH--AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-QADS 180
Query: 360 EM-ALTGTFVYMAPEVI-QCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
EM T Y APEVI Y++ D++S G I+ E+ITG + D+
Sbjct: 181 EMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH 231
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 298 VPLP--PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
VP P P E ++ + + +LH + V+HRDLKP NI + + +++ADFG AR
Sbjct: 112 VPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARI 169
Query: 356 LSDGEMALTGTFV---YMAPEVIQCEPYSEKSDVYSFGIILNEII 397
S +MALT V Y APEV+ Y+ D++S G I E+
Sbjct: 170 YS-FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 298 VPLP--PFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
VP P P E ++ + + +LH + V+HRDLKP NI + + +++ADFG AR
Sbjct: 112 VPEPGVPTETIKDMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARI 169
Query: 356 LSDGEMALTGTFV---YMAPEVIQCEPYSEKSDVYSFGIILNEII 397
S +MALT V Y APEV+ Y+ D++S G I E+
Sbjct: 170 YS-FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 31/215 (14%)
Query: 239 TFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMV 298
FF +E D ++ +V+QL A + Y ++ + G L + V
Sbjct: 114 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--------V 165
Query: 299 PLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL 356
P E+ AR E+ A+ +H IHRD+KP N+ LD + H+++ADFG +
Sbjct: 166 P-----EKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218
Query: 357 SDGEMA----LTGTFVYMAPEVIQCEP----YSEKSDVYSFGIILNEIITGNHPYIEKDY 408
+ M GT Y++PEV++ + Y + D +S G+ L E++ G+ P+ Y
Sbjct: 219 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF----Y 274
Query: 409 KPAKIAM--EVGEGKLRPALPEEDGQLRELIELIC 441
+ + ++ K P+++ +E LIC
Sbjct: 275 ADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLIC 309
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 31/215 (14%)
Query: 239 TFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMV 298
FF +E D ++ +V+QL A + Y ++ + G L + V
Sbjct: 119 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--------V 170
Query: 299 PLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL 356
P E+ AR E+ A+ +H IHRD+KP N+ LD + H+++ADFG +
Sbjct: 171 P-----EKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKM 223
Query: 357 SDGEMA----LTGTFVYMAPEVIQCEP----YSEKSDVYSFGIILNEIITGNHPYIEKDY 408
+ M GT Y++PEV++ + Y + D +S G+ L E++ G+ P+ Y
Sbjct: 224 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF----Y 279
Query: 409 KPAKIAM--EVGEGKLRPALPEEDGQLRELIELIC 441
+ + ++ K P+++ +E LIC
Sbjct: 280 ADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLIC 314
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 34/230 (14%)
Query: 200 QEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVL 257
Q ++G+G+ ++R + G AVK + + F A+E+ + ++
Sbjct: 98 QLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFR---------AEELMACAGLTSPRIV 148
Query: 258 QLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAM 317
L GA E P+ + L G +L G +++ +P L +ALE +
Sbjct: 149 PLYGAVREGPWVNIFMELLEGGSL-------GQLVKEQGCLPEDRALYYLGQALE---GL 198
Query: 318 QYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSD---GEMALTGTFV----- 368
+YLH ++ ++H D+K N+ L D H + DFGHA L G+ LTG ++
Sbjct: 199 EYLHSRR--ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTET 256
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKP--AKIAME 416
+MAPEV+ K DV+S ++ ++ G HP+ + P KIA E
Sbjct: 257 HMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASE 306
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 8/107 (7%)
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDG 359
EE + +I + YLH +K + H DLKP NI L D H+++ DFG A + DG
Sbjct: 115 EEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 360 E--MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
+ GT ++APE++ EP ++D++S G+I +++G P++
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 8/107 (7%)
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDG 359
EE + +I + YLH +K + H DLKP NI L D H+++ DFG A + DG
Sbjct: 115 EEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 360 E--MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
+ GT ++APE++ EP ++D++S G+I +++G P++
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
I M+YL + +HRDL NI ++ +++DFG +R L D A T
Sbjct: 125 IGSGMKYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 182
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ APE I ++ SDV+S+GI++ E+++ G PY + + A+E EG P
Sbjct: 183 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE--EGYRLP- 239
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P D + L +L+ W + S RP F I L +
Sbjct: 240 -PPMDCPI-ALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
I M+YL + +HRDL NI ++ +++DFG +R L D A T
Sbjct: 140 IGSGMKYLSDMS--AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 197
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ APE I ++ SDV+S+GI++ E+++ G PY + + A+E EG P
Sbjct: 198 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE--EGYRLP- 254
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P D + L +L+ W + S RP F I L +
Sbjct: 255 -PPMDCPI-ALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 8/107 (7%)
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDG 359
EE + +I + YLH +K + H DLKP NI L D H+++ DFG A + DG
Sbjct: 115 EEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 360 E--MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
+ GT ++APE++ EP ++D++S G+I +++G P++
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 108/244 (44%), Gaps = 31/244 (12%)
Query: 164 HRYCSQTPLLQQSDLAVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAI--WRGLDV 221
H + + P + +L T+ W + P+ +G G ++ A G V
Sbjct: 5 HHHSQERPTFYRQELNKTI-------WEV-PERYQNLSPVGSGAYGSVCAAFDTKTGHRV 56
Query: 222 AVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGA-----CLEPPYRGWLVTEL 276
AVK + F T+ +E+ L +H V+ L+ LE +LVT L
Sbjct: 57 AVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 114
Query: 277 LGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSN 336
+G L + + Q+ + V ++ I + ++Y+H +IHRDLKPSN
Sbjct: 115 MGADLN---NIVKCQKLTDDHVQFLIYQ--------ILRGLKYIH--SADIIHRDLKPSN 161
Query: 337 IFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV-IQCEPYSEKSDVYSFGIILNE 395
+ +++ ++I DFG AR D T Y APE+ + Y++ D++S G I+ E
Sbjct: 162 LAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 221
Query: 396 IITG 399
++TG
Sbjct: 222 LLTG 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 243 QEVDTLSRQRHRFVLQLMGA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM 297
+E+ L +H V+ L+ LE +LVT L+G L + + Q+ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDH 126
Query: 298 VPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS 357
V ++ I + ++Y+H +IHRDLKPSN+ +++ ++I DFG AR
Sbjct: 127 VQFLIYQ--------ILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
Query: 358 DGEMALTGTFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITG 399
D T Y APE+ + Y++ D++S G I+ E++TG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 67/115 (58%), Gaps = 10/115 (8%)
Query: 300 LPPFEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS 357
L P E AR ++ + ++YLH QK +IHRD+KPSN+ + + H++IADFG +
Sbjct: 131 LKPLSEDQARFYFQDLIKGIEYLHYQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 358 DGEMALT---GTFVYMAPEVIQ--CEPYSEKS-DVYSFGIILNEIITGNHPYIEK 406
+ L+ GT +MAPE + + +S K+ DV++ G+ L + G P++++
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 31/215 (14%)
Query: 239 TFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMV 298
FF +E D ++ +V+QL A + Y ++ + G L + V
Sbjct: 119 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD--------V 170
Query: 299 PLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL 356
P E+ AR E+ A+ +H IHRD+KP N+ LD + H+++ADFG +
Sbjct: 171 P-----EKWARFYTAEVVLALDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFGTCMKM 223
Query: 357 SDGEMA----LTGTFVYMAPEVIQCEP----YSEKSDVYSFGIILNEIITGNHPYIEKDY 408
+ M GT Y++PEV++ + Y + D +S G+ L E++ G+ P+ Y
Sbjct: 224 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF----Y 279
Query: 409 KPAKIAM--EVGEGKLRPALPEEDGQLRELIELIC 441
+ + ++ K P+++ +E LIC
Sbjct: 280 ADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLIC 314
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 243 QEVDTLSRQRHRFVLQLMGA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM 297
+E+ L +H V+ L+ LE +LVT L+G L + + Q+ +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDH 122
Query: 298 VPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS 357
V ++ I + ++Y+H +IHRDLKPSN+ +++ ++I DFG AR
Sbjct: 123 VQFLIYQ--------ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 172
Query: 358 DGEMALTGTFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITG 399
D T Y APE+ + Y++ D++S G I+ E++TG
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 8/107 (7%)
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDG 359
EE + +I + YLH +K + H DLKP NI L D H+++ DFG A + DG
Sbjct: 115 EEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 360 E--MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
+ GT ++APE++ EP ++D++S G+I +++G P++
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 16/161 (9%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV---- 368
IA M+YL + +HR L NI ++ +++DFG +RFL D T T
Sbjct: 118 IAAGMKYLADMN--YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGK 175
Query: 369 ----YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLR 423
+ APE IQ ++ SDV+S+GI++ E+++ G PY + + A+E + +L
Sbjct: 176 IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE-QDYRLP 234
Query: 424 PALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P + L +L+ W D + RP F I +L +
Sbjct: 235 PPMDCPSA----LHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 8/107 (7%)
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDG 359
EE + +I + YLH +K + H DLKP NI L D H+++ DFG A + DG
Sbjct: 115 EEATSFIKQILDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 360 E--MALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
+ GT ++APE++ EP ++D++S G+I +++G P++
Sbjct: 173 VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 243 QEVDTLSRQRHRFVLQLMGA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM 297
+E+ L +H V+ L+ LE +LVT L+G L + + Q+ +
Sbjct: 80 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDH 136
Query: 298 VPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS 357
V ++ I + ++Y+H +IHRDLKPSN+ +++ ++I DFG AR
Sbjct: 137 VQFLIYQ--------ILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 186
Query: 358 DGEMALTGTFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITG 399
D T Y APE+ + Y++ D++S G I+ E++TG
Sbjct: 187 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 229
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGT------ 366
I M+YL + +HRDL NI ++ +++DFG +R L D A T
Sbjct: 119 IGSGMKYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 176
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+ APE I ++ SDV+S+GI++ E+++ G PY + + A+E EG P
Sbjct: 177 IRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE--EGYRLP- 233
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLKNI 464
P D + L +L+ W + S RP F I L +
Sbjct: 234 -PPMDCPI-ALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 243 QEVDTLSRQRHRFVLQLMGA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM 297
+E+ L +H V+ L+ LE +LVT L+G L + + Q+ +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDH 146
Query: 298 VPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS 357
V ++ I + ++Y+H +IHRDLKPSN+ +++ ++I DFG AR
Sbjct: 147 VQFLIYQ--------ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 196
Query: 358 DGEMALTGTFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITG 399
D T Y APE+ + Y++ D++S G I+ E++TG
Sbjct: 197 DEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 243 QEVDTLSRQRHRFVLQLMGA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM 297
+E+ L +H V+ L+ LE +LVT L+G L + + Q+ +
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDH 146
Query: 298 VPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS 357
V ++ I + ++Y+H +IHRDLKPSN+ +++ ++I DFG AR
Sbjct: 147 VQFLIYQ--------ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 196
Query: 358 DGEMALTGTFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITG 399
D T Y APE+ + Y++ D++S G I+ E++TG
Sbjct: 197 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 239
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
Query: 243 QEVDTLSRQRHRFVLQLMGA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM 297
+E+ L +H V+ L+ LE +LVT L+G L + + Q+ +
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDH 145
Query: 298 VPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS 357
V ++ I + ++Y+H +IHRDLKPSN+ +++ ++I DFG AR
Sbjct: 146 VQFLIYQ--------ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTD 195
Query: 358 DGEMALTGTFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITG 399
D T Y APE+ + Y++ D++S G I+ E++TG
Sbjct: 196 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 12/123 (9%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD----DAKHVRIADFG-HARFLSDGEMA-LTG 365
++ + Y+H K K++HRDLKP N+ L+ DA ++RI DFG F + +M G
Sbjct: 157 QVLSGITYMH--KNKIVHRDLKPENLLLESKSKDA-NIRIIDFGLSTHFEASKKMKDKIG 213
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPA 425
T Y+APEV+ Y EK DV+S G+IL +++G P+ I +V +GK
Sbjct: 214 TAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPF--NGANEYDILKKVEKGKYTFE 270
Query: 426 LPE 428
LP+
Sbjct: 271 LPQ 273
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 12/123 (9%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD----DAKHVRIADFG-HARFLSDGEMA-LTG 365
++ + Y+H K K++HRDLKP N+ L+ DA ++RI DFG F + +M G
Sbjct: 158 QVLSGITYMH--KNKIVHRDLKPENLLLESKSKDA-NIRIIDFGLSTHFEASKKMKDKIG 214
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPA 425
T Y+APEV+ Y EK DV+S G+IL +++G P+ I +V +GK
Sbjct: 215 TAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPF--NGANEYDILKKVEKGKYTFE 271
Query: 426 LPE 428
LP+
Sbjct: 272 LPQ 274
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 12/123 (9%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD----DAKHVRIADFG-HARFLSDGEMA-LTG 365
++ + Y+H K K++HRDLKP N+ L+ DA ++RI DFG F + +M G
Sbjct: 134 QVLSGITYMH--KNKIVHRDLKPENLLLESKSKDA-NIRIIDFGLSTHFEASKKMKDKIG 190
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPA 425
T Y+APEV+ Y EK DV+S G+IL +++G P+ I +V +GK
Sbjct: 191 TAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPF--NGANEYDILKKVEKGKYTFE 247
Query: 426 LPE 428
LP+
Sbjct: 248 LPQ 250
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 25/173 (14%)
Query: 302 PFEER--LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSD 358
P E R L + ++AQ M +L + IHRD+ N+ L + +I DFG AR ++D
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 359 GEMALTGT----FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----IEKDY 408
+ G +MAPE I Y+ +SDV+S+GI+L EI + G +PY K Y
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 271
Query: 409 KPAKIAMEVGEGKLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSL 461
K K ++ + P + + ++ W + + RP+F I CS
Sbjct: 272 KLVKDGYQMAQPAFAP---------KNIYSIMQACWALEPTHRPTFQQI-CSF 314
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 22/192 (11%)
Query: 243 QEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP 302
+EV+ L + H +++L LE ++V EL T E + ++R
Sbjct: 70 REVELLKKLDHPNIMKLF-EILEDSSSFYIVGELY--TGGELFDEIIKRKRFS------- 119
Query: 303 FEERLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHAR-FLS 357
E AR + ++ + Y+H K ++HRDLKP NI L+ + ++I DFG + F
Sbjct: 120 -EHDAARIIKQVFSGITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 358 DGEMA-LTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAME 416
+ +M GT Y+APEV++ Y EK DV+S G+IL +++G P+ K+ I
Sbjct: 177 NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--EYDILKR 233
Query: 417 VGEGKLRPALPE 428
V GK LP+
Sbjct: 234 VETGKYAFDLPQ 245
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 110/241 (45%), Gaps = 32/241 (13%)
Query: 182 VSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVT 239
V K + + P+ LQ IG+G + A R VA+K I P F H T
Sbjct: 31 VEMVKGQPFDVGPRYTQLQ-YIGEGAYGMVSSAYDHVRKTRVAIKKISP-FEHQTYCQRT 88
Query: 240 FFAQEVDTLSRQRHRFVLQ----LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKE 295
+E+ L R RH V+ L + LE ++V +L+ T L + L SQ+
Sbjct: 89 L--REIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLK---SQQLSN 143
Query: 296 RMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARF 355
+ +I + ++Y+H V+HRDLKPSN+ ++ ++I DFG AR
Sbjct: 144 DHI--------CYFLYQILRGLKYIHSAN--VLHRDLKPSNLLINTTCDLKICDFGLAR- 192
Query: 356 LSDGEMALTGTFV-------YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKD 407
++D E TG Y APE+ + + Y++ D++S G IL E+++ + K
Sbjct: 193 IADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH 252
Query: 408 Y 408
Y
Sbjct: 253 Y 253
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 34/230 (14%)
Query: 200 QEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVL 257
Q ++G+G+ ++R + G AVK + + F A+E+ + ++
Sbjct: 79 QLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFR---------AEELMACAGLTSPRIV 129
Query: 258 QLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAM 317
L GA E P+ + L G +L G +++ +P L +ALE +
Sbjct: 130 PLYGAVREGPWVNIFMELLEGGSL-------GQLVKEQGCLPEDRALYYLGQALE---GL 179
Query: 318 QYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSD---GEMALTGTFV----- 368
+YLH ++ ++H D+K N+ L D H + DFGHA L G+ LTG ++
Sbjct: 180 EYLHSRR--ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTET 237
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKP--AKIAME 416
+MAPEV+ K DV+S ++ ++ G HP+ + P KIA E
Sbjct: 238 HMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASE 287
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 8/97 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFG-HARFLSDGEMA-LTGT 366
++ YLH K ++HRDLKP N+ L+ ++I DFG A F G+M GT
Sbjct: 112 QVLSGTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGT 169
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APEV++ + Y EK DV+S G+IL ++ G P+
Sbjct: 170 AYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 23/161 (14%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSDGEMALTGT---- 366
++AQ M +L + IHRD+ N+ L + +I DFG AR ++D + G
Sbjct: 174 QVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 231
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPY-----IEKDYKPAKIAMEVGEG 420
+MAPE I Y+ +SDV+S+GI+L EI + G +PY K YK K ++ +
Sbjct: 232 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 291
Query: 421 KLRPALPEEDGQLRELIELICLSWDGDASVRPSFSSITCSL 461
P + + ++ W + + RP+F I CS
Sbjct: 292 AFAP---------KNIYSIMQACWALEPTHRPTFQQI-CSF 322
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 24/204 (11%)
Query: 204 GQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGA- 262
QG + + G++VAVK + F N+ +E+ L H+ ++ L+
Sbjct: 34 AQGIVCAAFDTV-LGINVAVKKLSRPF--QNQTHAKRAYRELVLLKCVNHKNIISLLNVF 90
Query: 263 ----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
LE +LV EL+ L + +H + ERM L ++ ++
Sbjct: 91 TPQKTLEEFQDVYLVMELMDANLCQVIH---MELDHERMSYL---------LYQMLCGIK 138
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQ 376
+LH +IHRDLKPSNI + ++I DFG AR S M T Y APEVI
Sbjct: 139 HLH--SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVIL 196
Query: 377 CEPYSEKSDVYSFGIILNEIITGN 400
Y E D++S G I+ E++ G+
Sbjct: 197 GMGYKENVDIWSVGCIMGELVKGS 220
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 66/122 (54%), Gaps = 10/122 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK---HVRIADFG-HARFLSDGEMA-LTGT 366
++ + Y+H K K++HRDLKP N+ L+ ++RI DFG F + +M GT
Sbjct: 140 QVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGT 197
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPAL 426
Y+APEV+ Y EK DV+S G+IL +++G P+ I +V +GK L
Sbjct: 198 AYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPF--NGANEYDILKKVEKGKYTFEL 254
Query: 427 PE 428
P+
Sbjct: 255 PQ 256
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 8/97 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFG-HARFLSDGEMA-LTGT 366
++ YLH K ++HRDLKP N+ L+ ++I DFG A F G+M GT
Sbjct: 129 QVLSGTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGT 186
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APEV++ + Y EK DV+S G+IL ++ G P+
Sbjct: 187 AYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 10/135 (7%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDD---AKHVRIADFGHARFLSDGEMA---LTG 365
+I +++ ++H+ ++HRDLKP N+ L V++ADFG A + + A G
Sbjct: 138 QILESVNHIHQHD--IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAG 195
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPA 425
T Y++PEV++ +PY + D+++ G+IL ++ G P+ ++D K+ ++ G
Sbjct: 196 TPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQH--KLYQQIKAGAYDFP 253
Query: 426 LPEEDGQLRELIELI 440
PE D E LI
Sbjct: 254 SPEWDTVTPEAKNLI 268
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 77/138 (55%), Gaps = 9/138 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLSD-GEMA--LTGTF 367
EI A+++LH K +I+RD+K NI LD HV + DFG ++ F++D E A GT
Sbjct: 167 EIVLALEHLH--KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTI 224
Query: 368 VYMAPEVIQC--EPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPA 425
YMAP++++ + + D +S G+++ E++TG P+ K ++ + K P
Sbjct: 225 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP 284
Query: 426 LPEEDGQL-RELIELICL 442
P+E L ++LI+ + +
Sbjct: 285 YPQEMSALAKDLIQRLLM 302
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I FG AR D T Y APE+
Sbjct: 137 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 22/192 (11%)
Query: 243 QEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP 302
+EV+ L + H +++L LE ++V EL T E + ++R
Sbjct: 70 REVELLKKLDHPNIMKLF-EILEDSSSFYIVGELY--TGGELFDEIIKRKRFS------- 119
Query: 303 FEERLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHAR-FLS 357
E AR + ++ + Y+H K ++HRDLKP NI L+ + ++I DFG + F
Sbjct: 120 -EHDAARIIKQVFSGITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 358 DGEMA-LTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAME 416
+ +M GT Y+APEV++ Y EK DV+S G+IL +++G P+ K+ I
Sbjct: 177 NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--EYDILKR 233
Query: 417 VGEGKLRPALPE 428
V GK LP+
Sbjct: 234 VETGKYAFDLPQ 245
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMA 371
+I + ++Y+H +IHRDLKPSN+ +++ ++I DFG AR D T Y A
Sbjct: 129 QILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 186
Query: 372 PEV-IQCEPYSEKSDVYSFGIILNEIITG 399
PE+ + Y++ D++S G I+ E++TG
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTG 215
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 22/192 (11%)
Query: 243 QEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP 302
+EV+ L + H +++L LE ++V EL T E + ++R
Sbjct: 70 REVELLKKLDHPNIMKLF-EILEDSSSFYIVGELY--TGGELFDEIIKRKRFS------- 119
Query: 303 FEERLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHAR-FLS 357
E AR + ++ + Y+H K ++HRDLKP NI L+ + ++I DFG + F
Sbjct: 120 -EHDAARIIKQVFSGITYMH--KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 358 DGEMA-LTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAME 416
+ +M GT Y+APEV++ Y EK DV+S G+IL +++G P+ K+ I
Sbjct: 177 NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--EYDILKR 233
Query: 417 VGEGKLRPALPE 428
V GK LP+
Sbjct: 234 VETGKYAFDLPQ 245
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 19/172 (11%)
Query: 243 QEVDTLSRQRHRFVLQLM-----GACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM 297
+E+ L +H V+ L+ +E +LVT L+G L + + SQ +
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLN---NIVKSQALSDEH 132
Query: 298 VPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS 357
V ++ + + ++Y+H +IHRDLKPSN+ +++ +RI DFG AR
Sbjct: 133 VQFLVYQ--------LLRGLKYIH--SAGIIHRDLKPSNVAVNEDSELRILDFGLARQAD 182
Query: 358 DGEMALTGTFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
+ T Y APE+ + Y++ D++S G I+ E++ G + DY
Sbjct: 183 EEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 234
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 111/238 (46%), Gaps = 52/238 (21%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRGLD------VAVKCIYPDFFHTNENAVTFFAQEVDTL 248
++ +L +K+G+G Y +W+ +D VAVK I+ F ++ + TF +E+ L
Sbjct: 9 RKYELVKKLGKGA----YGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF--REIMIL 62
Query: 249 SR-QRHRFVLQLMGACLEPPYRG-WLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEER 306
+ H ++ L+ R +LV + + T L + R L P ++
Sbjct: 63 TELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVI----------RANILEPVHKQ 112
Query: 307 LARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-FLS-------- 357
++ + ++YLH ++HRD+KPSNI L+ HV++ADFG +R F++
Sbjct: 113 YV-VYQLIKVIKYLHSGG--LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNI 169
Query: 358 -----------DGEMALTGTFV----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITG 399
D + + +V Y APE+ + Y++ D++S G IL EI+ G
Sbjct: 170 PLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMA 371
++ + ++Y+H +IHRDLKPSN+ +++ +RI DFG AR + T Y A
Sbjct: 139 QLLRGLKYIH--SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRA 196
Query: 372 PEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
PE+ + Y++ D++S G I+ E++ G + DY
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 234
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I D G AR D T Y APE+
Sbjct: 137 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 201 EKIGQGTTANIYRAIWR-GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQL 259
EKIG+GT +Y+A G A+K I + +E + +E+ L +H +++L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLE--KEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 260 MGACLEPPYRGWLVTELLGTTLKEWLH----GLGSQRRKERMVPLPPFEERLARALEIAQ 315
+ R LV E L LK+ L GL S K + L++
Sbjct: 66 YD-VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-------------LQLLN 111
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV---YMAP 372
+ Y H+++ V+HRDLKP N+ ++ ++IADFG AR T V Y AP
Sbjct: 112 GIAYCHDRR--VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAP 169
Query: 373 EVIQ-CEPYSEKSDVYSFGIILNEIITG 399
+V+ + YS D++S G I E++ G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 201 EKIGQGTTANIYRAIWR-GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQL 259
EKIG+GT +Y+A G A+K I + +E + +E+ L +H +++L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLE--KEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 260 MGACLEPPYRGWLVTELLGTTLKEWLH----GLGSQRRKERMVPLPPFEERLARALEIAQ 315
+ R LV E L LK+ L GL S K + L++
Sbjct: 66 YD-VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-------------LQLLN 111
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAP 372
+ Y H+++ V+HRDLKP N+ ++ ++IADFG AR T T Y AP
Sbjct: 112 GIAYCHDRR--VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAP 169
Query: 373 EVIQ-CEPYSEKSDVYSFGIILNEIITG 399
+V+ + YS D++S G I E++ G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 201 EKIGQGTTANIYRAIWR-GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQL 259
EKIG+GT +Y+A G A+K I + +E + +E+ L +H +++L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLE--KEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 260 MGACLEPPYRGWLVTELLGTTLKEWLH----GLGSQRRKERMVPLPPFEERLARALEIAQ 315
+ R LV E L LK+ L GL S K + L++
Sbjct: 66 YD-VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL-------------LQLLN 111
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAP 372
+ Y H+++ V+HRDLKP N+ ++ ++IADFG AR T T Y AP
Sbjct: 112 GIAYCHDRR--VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAP 169
Query: 373 EVIQ-CEPYSEKSDVYSFGIILNEIITG 399
+V+ + YS D++S G I E++ G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I D G AR D T Y APE+
Sbjct: 137 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 23/205 (11%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
+G G ++ A GL VAVK + F T+ +E+ L +H V+ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHENVIGLL 87
Query: 261 GA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQ 315
LE +LVT L+G L + + Q+ + V ++ I +
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDHVQFLIYQ--------ILR 136
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMAPEV- 374
++Y+H +IHRDLKPSN+ +++ ++I D G AR D T Y APE+
Sbjct: 137 GLKYIH--SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 375 IQCEPYSEKSDVYSFGIILNEIITG 399
+ Y++ D++S G I+ E++TG
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 82/175 (46%), Gaps = 25/175 (14%)
Query: 239 TFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMV 298
FF +E D ++ +V+QL A + Y ++ + G L + V
Sbjct: 120 AFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD--------V 171
Query: 299 PLPPFEERLAR--ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL 356
P E+ A+ E+ A+ +H +IHRD+KP N+ LD H+++ADFG +
Sbjct: 172 P-----EKWAKFYTAEVVLALDAIHSMG--LIHRDVKPDNMLLDKHGHLKLADFGTCMKM 224
Query: 357 SDGEMA----LTGTFVYMAPEVIQCEP----YSEKSDVYSFGIILNEIITGNHPY 403
+ M GT Y++PEV++ + Y + D +S G+ L E++ G+ P+
Sbjct: 225 DETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 22/140 (15%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNI-FLDDAKH--VRIADFGHARFLSDGEMALT--GT 366
++ A+ Y H Q V+H+DLKP NI F D + H ++I DFG A E + GT
Sbjct: 132 QMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGT 189
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI---------EKDYKPAKIAMEV 417
+YMAPEV + + + K D++S G+++ ++TG P+ + YK A+E
Sbjct: 190 ALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVEC 248
Query: 418 GEGKLRPALPEEDGQLRELI 437
RP P+ L++++
Sbjct: 249 -----RPLTPQAVDLLKQML 263
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 8/97 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFG-HARFLSDGEMA-LTGT 366
++ + YLH K ++HRDLKP N+ L+ + ++I DFG A F + +M GT
Sbjct: 144 QVLSGVTYLH--KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGT 201
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APEV++ + Y EK DV+S G+IL ++ G P+
Sbjct: 202 AYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 100/233 (42%), Gaps = 34/233 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-------LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
K I L +G G +Y G L VAVK + P+ + +E F E
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVY--SEQDELDFLMEALI 101
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP----F 303
+S+ H+ +++ +G L+ R L+ + G LK +L R+ R P P
Sbjct: 102 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-------RETRPRPSQPSSLAM 154
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHAR------ 354
+ L A +IA QYL E IHRD+ N L + +I DFG AR
Sbjct: 155 LDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 212
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEK 406
+ G A+ +M PE ++ K+D +SFG++L EI + G PY K
Sbjct: 213 YYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 264
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 17/119 (14%)
Query: 300 LPPFEERLARAL------EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA 353
L FE+RL + E+ A+ +H+ +HRD+KP NI +D H+R+ADFG
Sbjct: 165 LSKFEDRLPEEMARFYLAEMVIAIDSVHQLH--YVHRDIKPDNILMDMNGHIRLADFGSC 222
Query: 354 -RFLSDGEM---ALTGTFVYMAPEVIQCEP-----YSEKSDVYSFGIILNEIITGNHPY 403
+ + DG + GT Y++PE++Q Y + D +S G+ + E++ G P+
Sbjct: 223 LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 10/128 (7%)
Query: 320 LHEQKPKVIHRDLKPSNIFLDD---AKHVRIADFGHARFLSDGE----MALTGTFVYMAP 372
LH + V+HRDLKP N+ L V++ADFG A +GE GT Y++P
Sbjct: 135 LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSP 193
Query: 373 EVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALPEEDGQ 432
EV++ +PY + D+++ G+IL ++ G P+ ++D ++ ++ G PE D
Sbjct: 194 EVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH--RLYQQIKAGAYDFPSPEWDTV 251
Query: 433 LRELIELI 440
E +LI
Sbjct: 252 TPEAKDLI 259
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 22/177 (12%)
Query: 238 VTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM 297
V+ F +E D L R++ QL A + Y ++ +G L L G ER+
Sbjct: 105 VSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFG-----ERI 159
Query: 298 VPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA-RFL 356
P E EI A+ +H + +HRD+KP NI LD H+R+ADFG +
Sbjct: 160 ----PAEMARFYLAEIVMAIDSVH--RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLR 213
Query: 357 SDG---EMALTGTFVYMAPEVIQC-------EPYSEKSDVYSFGIILNEIITGNHPY 403
+DG + GT Y++PE++Q Y + D ++ G+ E+ G P+
Sbjct: 214 ADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 8/127 (6%)
Query: 320 LHEQKPKVIHRDLKPSNIFLDD---AKHVRIADFGHARFLSDGEMA---LTGTFVYMAPE 373
LH + V+HRDLKP N+ L V++ADFG A + + A GT Y++PE
Sbjct: 117 LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 374 VIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALPEEDGQL 433
V++ E Y + D+++ G+IL ++ G P+ ++D K+ ++ G PE D
Sbjct: 177 VLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQH--KLYQQIKAGAYDFPSPEWDTVT 234
Query: 434 RELIELI 440
E LI
Sbjct: 235 PEAKNLI 241
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 12/123 (9%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD----DAKHVRIADFGHARFL--SDGEMALTG 365
++ + Y H K K++HRDLKP N+ L+ DA ++RI DFG + S G
Sbjct: 134 QVLSGITYXH--KNKIVHRDLKPENLLLESKSKDA-NIRIIDFGLSTHFEASKKXKDKIG 190
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPA 425
T Y+APEV+ Y EK DV+S G+IL +++G P+ I +V +GK
Sbjct: 191 TAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPF--NGANEYDILKKVEKGKYTFE 247
Query: 426 LPE 428
LP+
Sbjct: 248 LPQ 250
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFVYMA 371
++ + ++Y+H +IHRDLKPSN+ +++ +RI DFG AR + T Y A
Sbjct: 131 QLLRGLKYIH--SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRA 188
Query: 372 PEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
PE+ + Y++ D++S G I+ E++ G + DY
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 226
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 305 ERLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA- 362
ER++ L ++ +++LH +IHRDLKPSNI + ++I DFG AR M
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMT 183
Query: 363 -LTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITG 399
T Y APEVI Y E D++S G+I+ E+I G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 305 ERLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA- 362
ER++ L ++ +++LH +IHRDLKPSNI + ++I DFG AR M
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMT 183
Query: 363 -LTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITG 399
T Y APEVI Y E D++S G+I+ E+I G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-------LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
K I L +G G +Y G L VAVK + P+ +E F E
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEV--CSEQDELDFLMEALI 101
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP----F 303
+S+ H+ +++ +G L+ R L+ + G LK +L R+ R P P
Sbjct: 102 ISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-------RETRPRPSQPSSLAM 154
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHAR------ 354
+ L A +IA QYL E IHRD+ N L + +I DFG AR
Sbjct: 155 LDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 212
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEK 406
+ G A+ +M PE ++ K+D +SFG++L EI + G PY K
Sbjct: 213 YYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 264
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-------LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
K I L +G G +Y G L VAVK + P+ +E F E
Sbjct: 48 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEV--CSEQDELDFLMEALI 104
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP----F 303
+S+ H+ +++ +G L+ R L+ + G LK +L R+ R P P
Sbjct: 105 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-------RETRPRPSQPSSLAM 157
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHAR------ 354
+ L A +IA QYL E IHRD+ N L + +I DFG AR
Sbjct: 158 LDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAG 215
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEK 406
+ G A+ +M PE ++ K+D +SFG++L EI + G PY K
Sbjct: 216 YYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 267
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-------LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
K I L +G G +Y G L VAVK + P+ +E F E
Sbjct: 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEV--CSEQDELDFLMEALI 127
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP----F 303
+S+ H+ +++ +G L+ R L+ + G LK +L R+ R P P
Sbjct: 128 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-------RETRPRPSQPSSLAM 180
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHAR------ 354
+ L A +IA QYL E IHRD+ N L + +I DFG AR
Sbjct: 181 LDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAG 238
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEK 406
+ G A+ +M PE ++ K+D +SFG++L EI + G PY K
Sbjct: 239 YYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 290
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-------LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
K I L +G G +Y G L VAVK + P+ +E F E
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEV--CSEQDELDFLMEALI 87
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP----F 303
+S+ H+ +++ +G L+ R L+ + G LK +L R+ R P P
Sbjct: 88 ISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-------RETRPRPSQPSSLAM 140
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHAR------ 354
+ L A +IA QYL E IHRD+ N L + +I DFG AR
Sbjct: 141 LDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 198
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEK 406
+ G A+ +M PE ++ K+D +SFG++L EI + G PY K
Sbjct: 199 YYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 250
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 40/250 (16%)
Query: 201 EKIGQGTTANIYRAI-WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQL 259
EK+G+GT +Y+A +G VA+K I D +E + +E+ L H ++ L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLD--AEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 260 MGA-----CLEPPYRGWLVTELLGTTLKEWL--HGLGSQRRKERMVPLPPFEERLARALE 312
+ CL LV E + LK+ L + G Q + ++ + +L R +
Sbjct: 85 IDVIHSERCLT------LVFEFMEKDLKKVLDENKTGLQDSQIKI-----YLYQLLRGVA 133
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVY 369
H + +++HRDLKP N+ ++ +++ADFG AR + T T Y
Sbjct: 134 --------HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWY 185
Query: 370 MAPEVIQ-CEPYSEKSDVYSFGIILNEIITGN--HPYIEKDYKPAKIAMEVGEGKLRPAL 426
AP+V+ + YS D++S G I E+ITG P + D + KI +G
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPN----- 240
Query: 427 PEEDGQLREL 436
P E Q++EL
Sbjct: 241 PREWPQVQEL 250
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 31/237 (13%)
Query: 191 YIDPKEIDLQEKIGQGTTANIYRAIWRGLD-------VAVKCIYPDFFHTNENAVTFFAQ 243
+I ++I L+ ++G+G ++ A L VAVK + ++ F +
Sbjct: 11 HIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKD----FQR 66
Query: 244 EVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWL--HGL-------GSQRRK 294
E + L+ +H +++ G C + + + L ++L HG G R+
Sbjct: 67 EAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQA 126
Query: 295 ERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR 354
+ + L + L A +IA M YL Q +HRDL N + V+I DFG +R
Sbjct: 127 KGELGL---SQMLHIASQIASGMVYLASQH--FVHRDLATRNCLVGANLLVKIGDFGMSR 181
Query: 355 FLSDGEMALTGTFV-----YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIE 405
+ + G +M PE I ++ +SDV+SFG+IL EI T G P+ +
Sbjct: 182 DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQ 238
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-------LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
K I L +G G +Y G L VAVK + P+ +E F E
Sbjct: 22 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEV--CSEQDELDFLMEALI 78
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP----F 303
+S+ H+ +++ +G L+ R L+ + G LK +L R+ R P P
Sbjct: 79 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-------RETRPRPSQPSSLAM 131
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHAR------ 354
+ L A +IA QYL E IHRD+ N L + +I DFG AR
Sbjct: 132 LDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 189
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEK 406
+ G A+ +M PE ++ K+D +SFG++L EI + G PY K
Sbjct: 190 YYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 241
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 40/250 (16%)
Query: 201 EKIGQGTTANIYRAI-WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQL 259
EK+G+GT +Y+A +G VA+K I D +E + +E+ L H ++ L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLD--AEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 260 MGA-----CLEPPYRGWLVTELLGTTLKEWL--HGLGSQRRKERMVPLPPFEERLARALE 312
+ CL LV E + LK+ L + G Q + ++ + +L R +
Sbjct: 85 IDVIHSERCLT------LVFEFMEKDLKKVLDENKTGLQDSQIKI-----YLYQLLRGVA 133
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVY 369
H + +++HRDLKP N+ ++ +++ADFG AR + T T Y
Sbjct: 134 --------HCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWY 185
Query: 370 MAPEVIQ-CEPYSEKSDVYSFGIILNEIITGN--HPYIEKDYKPAKIAMEVGEGKLRPAL 426
AP+V+ + YS D++S G I E+ITG P + D + KI +G
Sbjct: 186 RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPN----- 240
Query: 427 PEEDGQLREL 436
P E Q++EL
Sbjct: 241 PREWPQVQEL 250
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 78/152 (51%), Gaps = 18/152 (11%)
Query: 301 PPFEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD 358
P +E LA + ++ A+ YL + +IHRD+K NI + + +++ DFG A +L
Sbjct: 125 PRLDEPLASYIFRQLVSAVGYLRLKD--IIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182
Query: 359 GEMALT--GTFVYMAPEVIQCEPY-SEKSDVYSFGIILNEIITGNHPYIEKD-------- 407
G++ T GT Y APEV+ PY + +++S G+ L ++ +P+ E +
Sbjct: 183 GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIH 242
Query: 408 --YKPAKIAMEVGEGKLRPALPEEDGQLRELI 437
Y +K M + G L+P +PE L +L+
Sbjct: 243 PPYLVSKELMSLVSGLLQP-VPERRTTLEKLV 273
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-------LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
K I L +G G +Y G L VAVK + P+ +E F E
Sbjct: 47 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEV--CSEQDELDFLMEALI 103
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP----F 303
+S+ H+ +++ +G L+ R L+ + G LK +L R+ R P P
Sbjct: 104 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-------RETRPRPSQPSSLAM 156
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHAR------ 354
+ L A +IA QYL E IHRD+ N L + +I DFG AR
Sbjct: 157 LDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 214
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEK 406
+ G A+ +M PE ++ K+D +SFG++L EI + G PY K
Sbjct: 215 YYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 266
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 110/229 (48%), Gaps = 45/229 (19%)
Query: 201 EKIGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSR-QRHRFVL 257
E +G+G A + A+ G + AVK I H+ +EV+TL + Q ++ +L
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVF----REVETLYQCQGNKNIL 74
Query: 258 QLMGACLEPPYRGWLVTELL--GTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL--EI 313
+L+ E R +LV E L G+ L Q++K F ER A + ++
Sbjct: 75 ELI-EFFEDDTRFYLVFEKLQGGSILAH------IQKQKH-------FNEREASRVVRDV 120
Query: 314 AQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHV---RIADF--GHARFLSDGEMALT---- 364
A A+ +LH + + HRDLKP NI + + V +I DF G L++ +T
Sbjct: 121 AAALDFLHTKG--IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPEL 178
Query: 365 ----GTFVYMAPEVI-----QCEPYSEKSDVYSFGIILNEIITGNHPYI 404
G+ YMAPEV+ Q Y ++ D++S G++L +++G P++
Sbjct: 179 TTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFV 227
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-------LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
K I L +G G +Y G L VAVK + P+ +E F E
Sbjct: 37 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEV--CSEQDELDFLMEALI 93
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP----F 303
+S+ H+ +++ +G L+ R L+ + G LK +L R+ R P P
Sbjct: 94 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-------RETRPRPSQPSSLAM 146
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHAR------ 354
+ L A +IA QYL E IHRD+ N L + +I DFG AR
Sbjct: 147 LDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 204
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEK 406
+ G A+ +M PE ++ K+D +SFG++L EI + G PY K
Sbjct: 205 YYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 256
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 97/232 (41%), Gaps = 32/232 (13%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-------LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
K I L +G G +Y G L VAVK + P+ +E F E
Sbjct: 57 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEV--CSEQDELDFLMEALI 113
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP----F 303
+S+ H+ +++ +G L+ R L+ + G LK +L R+ R P P
Sbjct: 114 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-------RETRPRPSQPSSLAM 166
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHARFLSDGE 360
+ L A +IA QYL E IHRD+ N L + +I DFG AR +
Sbjct: 167 LDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 224
Query: 361 MALTGTFV-----YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEK 406
G +M PE ++ K+D +SFG++L EI + G PY K
Sbjct: 225 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 276
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-------LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
K I L +G G +Y G L VAVK + P+ +E F E
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEV--CSEQDELDFLMEALI 86
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP----F 303
+S+ H+ +++ +G L+ R L+ + G LK +L R+ R P P
Sbjct: 87 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-------RETRPRPSQPSSLAM 139
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHAR------ 354
+ L A +IA QYL E IHRD+ N L + +I DFG AR
Sbjct: 140 LDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 197
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEK 406
+ G A+ +M PE ++ K+D +SFG++L EI + G PY K
Sbjct: 198 YYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 249
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-------LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
K I L +G G +Y G L VAVK + P+ +E F E
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEV--CSEQDELDFLMEALI 101
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP----F 303
+S+ H+ +++ +G L+ R L+ + G LK +L R+ R P P
Sbjct: 102 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL-------RETRPRPSQPSSLAM 154
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHAR------ 354
+ L A +IA QYL E IHRD+ N L + +I DFG AR
Sbjct: 155 LDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 212
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEK 406
+ G A+ +M PE ++ K+D +SFG++L EI + G PY K
Sbjct: 213 YYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 264
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 19/163 (11%)
Query: 243 QEVDTLSRQRHRFVLQLMGA-----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERM 297
+E+ L +H V+ L+ LE +LVT L+G L + + Q+ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN---NIVKCQKLTDDH 126
Query: 298 VPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS 357
V ++ I + ++Y+H +IHRDLKPSN+ +++ ++I DF AR
Sbjct: 127 VQFLIYQ--------ILRGLKYIH--SADIIHRDLKPSNLAVNEDCELKILDFYLARHTD 176
Query: 358 DGEMALTGTFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITG 399
D T Y APE+ + Y++ D++S G I+ E++TG
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-------LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
K I L +G G +Y G L VAVK + P+ +E F E
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEV--CSEQDELDFLMEALI 87
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP----F 303
+S+ H+ +++ +G L+ R L+ + G LK +L R+ R P P
Sbjct: 88 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-------RETRPRPSQPSSLAM 140
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHAR------ 354
+ L A +IA QYL E IHRD+ N L + +I DFG AR
Sbjct: 141 LDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 198
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEK 406
+ G A+ +M PE ++ K+D +SFG++L EI + G PY K
Sbjct: 199 YYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 250
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-------LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
K I L +G G +Y G L VAVK + P+ +E F E
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEV--CSEQDELDFLMEALI 86
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP----F 303
+S+ H+ +++ +G L+ R L+ + G LK +L R+ R P P
Sbjct: 87 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFL-------RETRPRPSQPSSLAM 139
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHAR------ 354
+ L A +IA QYL E IHRD+ N L + +I DFG AR
Sbjct: 140 LDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAS 197
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEK 406
+ G A+ +M PE ++ K+D +SFG++L EI + G PY K
Sbjct: 198 YYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 249
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 327 VIHRDLKPSNIFL---DDAKHVRIADFGHARFLSDGEMA---LTGTFVYMAPEVIQCEPY 380
++HRDLKP N+ L V++ADFG A + + A GT Y++PEV++ +PY
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 381 SEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELI 440
+ D+++ G+IL ++ G P+ ++D ++ ++ G PE D E +LI
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQH--RLYQQIKAGAYDFPSPEWDTVTPEAKDLI 241
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 201 EKIGQGTTANIYRAIWRGLD--VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
+K+G+GT A +Y+ + D VA+K I E A +EV L +H ++
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIR---LEHEEGAPCTAIREVSLLKDLKHANIVT 64
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L + LV E L LK++L G+ V L F+ + + +
Sbjct: 65 LHD-IIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHN-VKLFLFQ--------LLRGLA 114
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS------DGEMALTGTFVYMAP 372
Y H QK V+HRDLKP N+ +++ +++ADFG AR S D E+ T Y P
Sbjct: 115 YCHRQK--VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV---TLWYRPP 169
Query: 373 EV-IQCEPYSEKSDVYSFGIILNEIITG 399
++ + YS + D++ G I E+ TG
Sbjct: 170 DILLGSTDYSTQIDMWGVGCIFYEMATG 197
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 327 VIHRDLKPSNIFL---DDAKHVRIADFGHARFLSDGEMA---LTGTFVYMAPEVIQCEPY 380
++HRDLKP N+ L V++ADFG A + + A GT Y++PEV++ +PY
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPY 183
Query: 381 SEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALPEEDGQLRELIELI 440
+ D+++ G+IL ++ G P+ ++D ++ ++ G PE D E +LI
Sbjct: 184 GKPVDMWACGVILYILLVGYPPFWDEDQH--RLYQQIKAGAYDFPSPEWDTVTPEAKDLI 241
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 10/128 (7%)
Query: 320 LHEQKPKVIHRDLKPSNIFLDD---AKHVRIADFGHARFLSDGE----MALTGTFVYMAP 372
LH + V+HR+LKP N+ L V++ADFG A +GE GT Y++P
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSP 182
Query: 373 EVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALPEEDGQ 432
EV++ +PY + D+++ G+IL ++ G P+ ++D ++ ++ G PE D
Sbjct: 183 EVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH--RLYQQIKAGAYDFPSPEWDTV 240
Query: 433 LRELIELI 440
E +LI
Sbjct: 241 TPEAKDLI 248
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 13/157 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR--FLSDGEMALTGTFV- 368
+IA M+YL V+H+DL N+ + D +V+I+D G R + +D L + +
Sbjct: 153 QIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 369 --YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+MAPE I +S SD++S+G++L E+ + G PY Y + + + R
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC--GYSNQDVVEMI---RNRQV 265
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
LP D + L+ W+ S RP F I L+
Sbjct: 266 LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 13/157 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR--FLSDGEMALTGTFV- 368
+IA M+YL V+H+DL N+ + D +V+I+D G R + +D L + +
Sbjct: 136 QIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 369 --YMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPA 425
+MAPE I +S SD++S+G++L E+ + G PY Y + + + R
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC--GYSNQDVVEMI---RNRQV 248
Query: 426 LPEEDGQLRELIELICLSWDGDASVRPSFSSITCSLK 462
LP D + L+ W+ S RP F I L+
Sbjct: 249 LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK---HVRIADFGHARFLSDG-EM-ALTGT 366
+I + + YLH+ ++H DLKP NI L ++I DFG +R + E+ + GT
Sbjct: 139 QILEGVYYLHQNN--IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGT 196
Query: 367 FVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKD 407
Y+APE++ +P + +D+++ GII ++T P++ +D
Sbjct: 197 PEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED 237
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 197 IDLQEKIGQGTTANIYRAIWRG------LDVAVKCIYPDFFHTNENAVTFFAQEVDTLSR 250
+++ ++G+G T+ +YR +G L V K + T E+ L R
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRT----------EIGVLLR 104
Query: 251 QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLAR- 309
H +++L E P LV EL+ T E +R+V + ER A
Sbjct: 105 LSHPNIIKLK-EIFETPTEISLVLELV--TGGELF---------DRIVEKGYYSERDAAD 152
Query: 310 -ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLD----DAKHVRIADFGHARFLSDGEMALT 364
+I +A+ YLHE ++HRDLKP N+ DA ++IADFG ++ + + T
Sbjct: 153 AVKQILEAVAYLHENG--IVHRDLKPENLLYATPAPDAP-LKIADFGLSKIVEHQVLMKT 209
Query: 365 --GTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEK 406
GT Y APE+++ Y + D++S GII ++ G P+ ++
Sbjct: 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDE 253
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 135/305 (44%), Gaps = 52/305 (17%)
Query: 170 TPLLQQSDLAVTVSQAKMNGWYIDPKEIDLQEKIGQGTTANI-YRAIWRGLDVAVKCIYP 228
+P L+Q D S + PK++ +G G I YR ++ DVAVK I P
Sbjct: 4 SPSLEQDDGDEETSVVIVGKISFCPKDV-----LGHGAEGTIVYRGMFDNRDVAVKRILP 58
Query: 229 DFFHTNENAVTFFAQEVDTL-SRQRHRFVLQLMGACLEPPYR-GWLVTELLGTTLKEWLH 286
+ F +F +EV L H V++ C E + ++ EL TL+E++
Sbjct: 59 ECF-------SFADREVQLLRESDEHPNVIRYF--CTEKDRQFQYIAIELCAATLQEYV- 108
Query: 287 GLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK--- 343
+++ + L P + + + +LH ++HRDLKP NI +
Sbjct: 109 ----EQKDFAHLGLEP----ITLLQQTTSGLAHLHSLN--IVHRDLKPHNILISMPNAHG 158
Query: 344 --HVRIADFGHARFLSDGEMALT------GTFVYMAPEVI--QC-EPYSEKSDVYSFGII 392
I+DFG + L+ G + + GT ++APE++ C E + D++S G +
Sbjct: 159 KIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCV 218
Query: 393 LNEIIT-GNHPYIEKDYKPAKIAMEVGEGKLRPALPE--EDGQLRELIE-LICLSWDGDA 448
+I+ G+HP+ + + A I + G L PE ED RELIE +I + D
Sbjct: 219 FYYVISEGSHPFGKSLQRQANILL--GACSLDCLHPEKHEDVIARELIEKMIAM----DP 272
Query: 449 SVRPS 453
RPS
Sbjct: 273 QKRPS 277
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 24/203 (11%)
Query: 204 GQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGA- 262
QG + + G++VAVK + F N+ +E+ L H+ ++ L+
Sbjct: 36 AQGIVCAAFDTV-LGINVAVKKLSRPF--QNQTHAKRAYRELVLLKCVNHKNIISLLNVF 92
Query: 263 ----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
LE +LV EL+ L + +H + ERM L ++ ++
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLCQVIH---MELDHERMSYL---------LYQMLCGIK 140
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQ 376
+LH +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 141 HLH--SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVIL 198
Query: 377 CEPYSEKSDVYSFGIILNEIITG 399
Y+ D++S G I+ E++ G
Sbjct: 199 GMGYAANVDIWSVGCIMGELVKG 221
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 27/116 (23%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDD-------------------------AKH 344
+EI +A+ YL +K + H DLKP NI LDD +
Sbjct: 143 CIEILKALNYL--RKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTG 200
Query: 345 VRIADFGHARFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGN 400
+++ DFG A F SD ++ T Y APEVI + SD++SFG +L E+ TG+
Sbjct: 201 IKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS 256
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 295 ERMVPLPPFEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIAD 349
ER+ F E A + ++ A+ ++H+ V+HRDLKP N+ +D ++I D
Sbjct: 95 ERIKKKKHFSETEASYIMRKLVSAVSHMHD--VGVVHRDLKPENLLFTDENDNLEIKIID 152
Query: 350 FGHARFLSDGEMALTG---TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEK 406
FG AR L T Y APE++ Y E D++S G+IL +++G P+
Sbjct: 153 FGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSH 212
Query: 407 D 407
D
Sbjct: 213 D 213
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 203 IGQGTTANIYRAI--WRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLM 260
IG+G + A + VA+K I P F H T +E+ L R RH ++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTL--REIKILLRFRHENIIGIN 107
Query: 261 GACLEPPYRG----WLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQA 316
P +LVT L+G L + L +Q + +I +
Sbjct: 108 DIIRAPTIEQMKDVYLVTHLMGADLYKLL---KTQHLSNDHI--------CYFLYQILRG 156
Query: 317 MQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV-------Y 369
++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG Y
Sbjct: 157 LKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYVATRWY 213
Query: 370 MAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 253
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 305 ERLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA- 362
ER++ L ++ +++LH +IHRDLKPSNI + ++I DFG AR M
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMT 183
Query: 363 -LTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITG 399
T Y APEVI Y E D++S G I+ E+I G
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 379 PYSEKSDVYSFGIILNEIITG 399
Y E D++S G I+ E+I G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMAL--TGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M + T Y APEVI
Sbjct: 143 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGM 202
Query: 379 PYSEKSDVYSFGIILNEIITG 399
Y E D++S G I+ E+I G
Sbjct: 203 GYKENVDIWSVGCIMGEMIKG 223
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 379 PYSEKSDVYSFGIILNEIITG 399
Y E D++S G I+ E+I G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHARFLSDGEMAL---TG 365
+I +A++Y H+ +IHRD+KP + L +++ V++ FG A L + + G
Sbjct: 140 QILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVG 197
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
T +MAPEV++ EPY + DV+ G+IL +++G P+
Sbjct: 198 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 31/229 (13%)
Query: 196 EIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRH 253
E ++ E IG G + A R G VA+K I P+ F NA +E+ L +H
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTL-RELKILKHFKH 113
Query: 254 RFVLQLMGACLEP--PY----RGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
++ + L P PY ++V +L+ + L + +H SQ PL E
Sbjct: 114 DNIIAIKD-ILRPTVPYGEFKSVYVVLDLMESDLHQIIHS--SQ-------PLT-LEHVR 162
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL----SDGEMAL 363
++ + ++Y+H + VIHRDLKPSN+ +++ ++I DFG AR L ++ + +
Sbjct: 163 YFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM 220
Query: 364 T---GTFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
T T Y APE+ + Y++ D++S G I E++ + K+Y
Sbjct: 221 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY 269
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 31/229 (13%)
Query: 196 EIDLQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRH 253
E ++ E IG G + A R G VA+K I P+ F NA +E+ L +H
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTL-RELKILKHFKH 112
Query: 254 RFVLQLMGACLEP--PY----RGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERL 307
++ + L P PY ++V +L+ + L + +H SQ PL E
Sbjct: 113 DNIIAIKD-ILRPTVPYGEFKSVYVVLDLMESDLHQIIHS--SQ-------PLT-LEHVR 161
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL----SDGEMAL 363
++ + ++Y+H + VIHRDLKPSN+ +++ ++I DFG AR L ++ + +
Sbjct: 162 YFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM 219
Query: 364 T---GTFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
T T Y APE+ + Y++ D++S G I E++ + K+Y
Sbjct: 220 TEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY 268
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 6/89 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+ + + +LH ++HRDLKP NI + V++ADFG AR S +MALT V
Sbjct: 128 QFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALTPVVVTLW 184
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEII 397
Y APEV+ Y+ D++S G I E+
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHARFLSDGEMAL---TG 365
+I +A++Y H+ +IHRD+KP + L +++ V++ FG A L + + G
Sbjct: 138 QILEALRYCHDNN--IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVG 195
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
T +MAPEV++ EPY + DV+ G+IL +++G P+
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
Query: 313 IAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALT-GTFVYMA 371
+ + Y+H +K + HRD+KPSNI +D V+++DFG + ++ D ++ + GT+ +M
Sbjct: 160 VLNSFSYIHNEK-NICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMP 218
Query: 372 PEVIQCE-PYS-EKSDVYSFGIIL 393
PE E Y+ K D++S GI L
Sbjct: 219 PEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 17/119 (14%)
Query: 300 LPPFEERLARAL------EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA 353
L FE++L + E+ A+ +H+ +HRD+KP N+ LD H+R+ADFG
Sbjct: 181 LSKFEDKLPEDMARFYIGEMVLAIDSIHQLH--YVHRDIKPDNVLLDVNGHIRLADFGSC 238
Query: 354 RFLSDG----EMALTGTFVYMAPEVIQC-----EPYSEKSDVYSFGIILNEIITGNHPY 403
++D GT Y++PE++Q Y + D +S G+ + E++ G P+
Sbjct: 239 LKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 17/119 (14%)
Query: 300 LPPFEERLARAL------EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHA 353
L FE++L + E+ A+ +H+ +HRD+KP N+ LD H+R+ADFG
Sbjct: 165 LSKFEDKLPEDMARFYIGEMVLAIDSIHQLH--YVHRDIKPDNVLLDVNGHIRLADFGSC 222
Query: 354 RFLSDG----EMALTGTFVYMAPEVIQCE-----PYSEKSDVYSFGIILNEIITGNHPY 403
++D GT Y++PE++Q Y + D +S G+ + E++ G P+
Sbjct: 223 LKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 99/233 (42%), Gaps = 34/233 (14%)
Query: 195 KEIDLQEKIGQGTTANIYRAIWRG-------LDVAVKCIYPDFFHTNENAVTFFAQEVDT 247
K I L +G G +Y G L VAVK + P+ +E F E
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEV--CSEQDELDFLMEALI 87
Query: 248 LSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPP----F 303
+S+ H+ +++ +G L+ R L+ + G LK +L R+ R P P
Sbjct: 88 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFL-------RETRPRPSQPSSLAM 140
Query: 304 EERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHVRIADFGHAR------ 354
+ L A +IA QYL E IHRD+ N L + +I DFG A+
Sbjct: 141 LDLLHVARDIACGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRAS 198
Query: 355 FLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIIT-GNHPYIEK 406
+ G A+ +M PE ++ K+D +SFG++L EI + G PY K
Sbjct: 199 YYRKGGCAML-PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 250
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 379 PYSEKSDVYSFGIILNEIITG 399
Y E D++S G I+ E+I G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 379 PYSEKSDVYSFGIILNEIITG 399
Y E D++S G I+ E+I G
Sbjct: 202 GYKENVDIWSVGCIMGEMIKG 222
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-----FLSDGEMALTGTFVYMAPEVI 375
H +IHRDLKPSNI + ++I DFG AR F+ E+ T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVV---TRYYRAPEVI 197
Query: 376 QCEPYSEKSDVYSFGIILNEIITG 399
Y E D++S G I+ E+I G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 379 PYSEKSDVYSFGIILNEIITG 399
Y E D++S G I+ E+I G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 379 PYSEKSDVYSFGIILNEIITG 399
Y E D++S G I+ E+I G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 26/213 (12%)
Query: 204 GQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGA- 262
QG Y A+ +VA+K + F N+ +E+ + H+ ++ L+
Sbjct: 36 AQGIVCAAYDAVL-DRNVAIKKLSRPF--QNQTHAKRAYRELVLMKXVNHKNIISLLNVF 92
Query: 263 ----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL-EIAQAM 317
LE +LV EL+ L + ++ + ER++ L ++ +
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLXQ-------------VIQMELDHERMSYLLYQMLXGI 139
Query: 318 QYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVI 375
++LH +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 376 QCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y E D++S G I+ E++ + +DY
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 113 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 113 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 112 QLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 113 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLS 357
F ER A + I +A+QYLH + HRD+KP N+ + +++ DFG A+ +
Sbjct: 158 FTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215
Query: 358 DGEMALTGTFV--YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
T + Y+APEV+ E Y + D++S G+I+ ++ G P+
Sbjct: 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLS 357
F ER A + I +A+QYLH + HRD+KP N+ + +++ DFG A+ +
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 169
Query: 358 DGEMALTGTFV--YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
T + Y+APEV+ E Y + D++S G+I+ ++ G P+
Sbjct: 170 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 113 QLMAGVVYLHGIG--ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 112 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 29/144 (20%)
Query: 275 ELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKP 334
ELLG + ++L + +P P + R A ++ QA+++LH+ K + H DLKP
Sbjct: 116 ELLGLSTFDFL-------KDNNYLPYPIHQVR-HMAFQLCQAVKFLHDNK--LTHTDLKP 165
Query: 335 SNIFLDDAKH-------------------VRIADFGHARFLSDGEMALTGTFVYMAPEVI 375
NI ++ + VR+ DFG A F + + T Y APEVI
Sbjct: 166 ENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVI 225
Query: 376 QCEPYSEKSDVYSFGIILNEIITG 399
+S+ DV+S G I+ E G
Sbjct: 226 LELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLS 357
F ER A + I +A+QYLH + HRD+KP N+ + +++ DFG A+ +
Sbjct: 164 FTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 221
Query: 358 DGEMALTGTFV--YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
T + Y+APEV+ E Y + D++S G+I+ ++ G P+
Sbjct: 222 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLS 357
F ER A + I +A+QYLH + HRD+KP N+ + +++ DFG A+ +
Sbjct: 120 FTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 177
Query: 358 DGEMALTGTFV--YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
T + Y+APEV+ E Y + D++S G+I+ ++ G P+
Sbjct: 178 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLS 357
F ER A + I +A+QYLH + HRD+KP N+ + +++ DFG A+ +
Sbjct: 113 FTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 170
Query: 358 DGEMALTGTFV--YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
T + Y+APEV+ E Y + D++S G+I+ ++ G P+
Sbjct: 171 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLS 357
F ER A + I +A+QYLH + HRD+KP N+ + +++ DFG A+ +
Sbjct: 128 FTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 185
Query: 358 DGEMALTGTFV--YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
T + Y+APEV+ E Y + D++S G+I+ ++ G P+
Sbjct: 186 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 305 ERLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA- 362
ER++ L ++ +++LH +IHRDLKPSNI + ++I DFG AR M
Sbjct: 126 ERMSYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMT 183
Query: 363 -LTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
T Y APEVI Y E D++S G I+ E++ + +DY
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 112 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 305 ERLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA- 362
ER++ L ++ +++LH +IHRDLKPSNI + ++I DFG AR M
Sbjct: 119 ERMSYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMT 176
Query: 363 -LTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
T Y APEVI Y E D++S G I+ E++ + +DY
Sbjct: 177 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 223
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 111 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 168
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 169 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 113 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 112 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 112 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLS 357
F ER A + I +A+QYLH + HRD+KP N+ + +++ DFG A+ +
Sbjct: 118 FTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 175
Query: 358 DGEMALTGTFV--YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
T + Y+APEV+ E Y + D++S G+I+ ++ G P+
Sbjct: 176 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 112 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 112 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 26/213 (12%)
Query: 204 GQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQLMGA- 262
QG Y A+ +VA+K + F N+ +E+ + H+ ++ L+
Sbjct: 36 AQGIVCAAYDAVL-DRNVAIKKLSRPF--QNQTHAKRAYRELVLMKXVNHKNIISLLNVF 92
Query: 263 ----CLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL-EIAQAM 317
LE +LV EL+ L + ++ + ER++ L ++ +
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLXQ-------------VIQMELDHERMSYLLYQMLCGI 139
Query: 318 QYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVI 375
++LH +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 140 KHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI 197
Query: 376 QCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y E D++S G I+ E++ + +DY
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 112 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLS 357
F ER A + I +A+QYLH + HRD+KP N+ + +++ DFG A+ +
Sbjct: 119 FTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 176
Query: 358 DGEMALTGTFV--YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
T + Y+APEV+ E Y + D++S G+I+ ++ G P+
Sbjct: 177 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 113 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLS 357
F ER A + I +A+QYLH + HRD+KP N+ + +++ DFG A+ +
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171
Query: 358 DGEMALTGTFV--YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
T + Y+APEV+ E Y + D++S G+I+ ++ G P+
Sbjct: 172 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 112 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 134 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTSDLKICDFGLAR-VADPDHDHTGFLTEYV 190
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 9/108 (8%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLS 357
F ER A + I +A+QYLH + HRD+KP N+ + +++ DFG A+ +
Sbjct: 114 FTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171
Query: 358 DGEMALTGTFV--YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
T + Y+APEV+ E Y + D++S G+I+ ++ G P+
Sbjct: 172 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 113 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 379 PYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y E D++S G I+ E++ + +DY
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 113 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 112 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-----FLSDGEMALTGTFVYMAPEVI 375
H +IHRDLKPSNI + ++I DFG AR F+ + E+ T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV---TRYYRAPEVI 197
Query: 376 QCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y E D++S G I+ E++ + +DY
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVCHKILFPGRDY 230
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 112 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFL--SDGEMALT---GT 366
++ + YLH + HRD+KP N+ LD+ +++I+DFG A ++ E L GT
Sbjct: 112 QLMAGVVYLH--GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 367 FVYMAPEVIQ-CEPYSEKSDVYSFGIILNEIITGNHPY 403
Y+APE+++ E ++E DV+S GI+L ++ G P+
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 136 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYV 192
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 136 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYV 192
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 132 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYV 188
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 132 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLAR-VADPDHDHTGFLTEYV 188
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH ++ + H DLKP NI L D +++ DFG A + G + G
Sbjct: 116 QILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 173
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 174 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 212
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH ++ + H DLKP NI L D +++ DFG A + G + G
Sbjct: 137 QILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 194
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 195 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 233
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 115/242 (47%), Gaps = 34/242 (14%)
Query: 199 LQEKIGQGTTANIYRAIWRGLDV--AVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFV 256
L+ IG+G+ + A+ +G + A K I P +F + V F QE++ + H +
Sbjct: 13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKI-PKYFVED---VDRFKQEIEIMKSLDHPNI 68
Query: 257 LQLMGACLEPPYRGWLVTELL--GTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL-EI 313
++L E +LV EL G + +H +R R E AR + ++
Sbjct: 69 IRLY-ETFEDNTDIYLVMELCTGGELFERVVH-----KRVFR-------ESDAARIMKDV 115
Query: 314 AQAMQYLHEQKPKVIHRDLKPSN-IFLDDAKH--VRIADFGHARFLSDGEMALT--GTFV 368
A+ Y H K V HRDLKP N +FL D+ +++ DFG A G+M T GT
Sbjct: 116 LSAVAYCH--KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPY 173
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
Y++P+V++ Y + D +S G+++ ++ G P+ ++ +++ EG PE
Sbjct: 174 YVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAP--TDXEVMLKIREGTF--TFPE 228
Query: 429 ED 430
+D
Sbjct: 229 KD 230
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 115/242 (47%), Gaps = 34/242 (14%)
Query: 199 LQEKIGQGTTANIYRAIWRGLDV--AVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFV 256
L+ IG+G+ + A+ +G + A K I P +F + V F QE++ + H +
Sbjct: 30 LENTIGRGSWGEVKIAVQKGTRIRRAAKKI-PKYFVED---VDRFKQEIEIMKSLDHPNI 85
Query: 257 LQLMGACLEPPYRGWLVTELL--GTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL-EI 313
++L E +LV EL G + +H +R R E AR + ++
Sbjct: 86 IRLY-ETFEDNTDIYLVMELCTGGELFERVVH-----KRVFR-------ESDAARIMKDV 132
Query: 314 AQAMQYLHEQKPKVIHRDLKPSN-IFLDDAKH--VRIADFGHARFLSDGEMALT--GTFV 368
A+ Y H K V HRDLKP N +FL D+ +++ DFG A G+M T GT
Sbjct: 133 LSAVAYCH--KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPY 190
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALPE 428
Y++P+V++ Y + D +S G+++ ++ G P+ ++ +++ EG PE
Sbjct: 191 YVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAP--TDXEVMLKIREGTF--TFPE 245
Query: 429 ED 430
+D
Sbjct: 246 KD 247
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH + + H DLKP NI L D ++I DFG A + G + G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 180 TPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 132 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKIXDFGLAR-VADPDHDHTGFLTEYV 188
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+ + + +LH ++HRDLKP NI + V++ADFG AR S +MAL V
Sbjct: 120 QFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALAPVVVTLW 176
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEII 397
Y APEV+ Y+ D++S G I E+
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH ++ + H DLKP NI L D +++ DFG A + G + G
Sbjct: 123 QILDGVHYLHSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 180
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 34/211 (16%)
Query: 202 KIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVT--FFAQEVDTLSRQRHRFVL 257
KIG+G+ +++ R G VA+K F + ++ V +E+ L + +H ++
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIK----KFLESEDDPVIKKIALREIRMLKQLKHPNLV 65
Query: 258 QLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL--EIAQ 315
L+ R LV E T+ LH L R +R VP E L +++ + Q
Sbjct: 66 NLL-EVFRRKRRLHLVFEYCDHTV---LHELD---RYQRGVP-----EHLVKSITWQTLQ 113
Query: 316 AMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS------DGEMALTGTFVY 369
A+ + H K IHRD+KP NI + +++ DFG AR L+ D E+A T Y
Sbjct: 114 AVNFCH--KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA---TRWY 168
Query: 370 MAPEVIQCEP-YSEKSDVYSFGIILNEIITG 399
+PE++ + Y DV++ G + E+++G
Sbjct: 169 RSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR-----FLSDGEMALTGTFVYMAPEVI 375
H +IHRDLKPSNI + ++I DFG AR F+ + E+ T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV---TRYYRAPEVI 197
Query: 376 QCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y E D++S G I+ E++ + +DY
Sbjct: 198 LGMGYKENVDLWSVGCIMGEMVCHKILFPGRDY 230
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 105/270 (38%), Gaps = 68/270 (25%)
Query: 244 EVDTLSRQRHRFVLQLMGACLEPPYRG-------WLVTELLGTTLKEWLHGLGSQRRKER 296
EV +L +H +LQ +GA RG WL+T H GS +
Sbjct: 68 EVYSLPGMKHENILQFIGA----EKRGTSVDVDLWLITAF---------HEKGSLSDFLK 114
Query: 297 MVPLPPFEERLARALEIAQAMQYLHE--------QKPKVIHRDLKPSNIFLDDAKHVRIA 348
+ + E A +A+ + YLHE KP + HRD+K N+ L + IA
Sbjct: 115 -ANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173
Query: 349 DFGHARFLSDGEMA-----LTGTFVYMAPEVIQCEPYSEKS-----DVYSFGIILNEIIT 398
DFG A G+ A GT YMAPEV++ ++ D+Y+ G++L E+ +
Sbjct: 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
Query: 399 --------------------GNHPYIEKDYKPAKIAMEVGEGKLRPALPE---EDGQLRE 435
G HP +E + V K RP L + + +
Sbjct: 234 RCTAADGPVDEYMLPFEEEIGQHPSLE------DMQEVVVHKKKRPVLRDYWQKHAGMAM 287
Query: 436 LIELICLSWDGDASVRPSFSSITCSLKNIQ 465
L E I WD DA R S + + +Q
Sbjct: 288 LCETIEECWDHDAEARLSAGCVGERITQMQ 317
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 152 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 208
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 253
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 136 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 192
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 137 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 193
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 238
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL 311
RH +++ L P + ++ G L E + G E F ++L +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF----FFQQLISGV 128
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDD--AKHVRIADFGH--ARFLSDGEMALTGTF 367
A AMQ V HRDLK N LD A ++IADFG+ A L + GT
Sbjct: 129 SYAHAMQ--------VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTP 180
Query: 368 VYMAPEVIQCEPYSEK-SDVYSFGIILNEIITGNHPY 403
Y+APEV+ + Y K +DV+S G+ L ++ G +P+
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 138 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 194
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 239
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 129 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 185
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 230
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 136 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 192
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 136 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 192
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 130 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 186
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 231
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 140 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 196
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 241
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 132 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 188
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG------ 365
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 136 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEXV 192
Query: 366 -TFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
T Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG------ 365
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 137 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLXEXV 193
Query: 366 -TFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
T Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 238
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+ + + +LH ++HRDLKP NI + V++ADFG AR S +MAL V
Sbjct: 120 QFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALDPVVVTLW 176
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEII 397
Y APEV+ Y+ D++S G I E+
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 134 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 190
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 96/210 (45%), Gaps = 34/210 (16%)
Query: 203 IGQGTTANIYRAIWRGLDVAVKCIYPDFFHTNENAVT--FFAQEVDTLSRQRHRFVLQLM 260
+G+G+ + + R D F ++++ + +E+ L + RH ++ L+
Sbjct: 33 VGEGSYGMVMKC--RNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 261 GACLEPPYRGWLVTELLGTTLKEWL----HGLGSQRRKERMVPLPPFEERLARALEIAQA 316
C + R +LV E + T+ + L +GL Q ++ + +I
Sbjct: 91 EVC-KKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYL-------------FQIING 136
Query: 317 MQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLS------DGEMALTGTFVYM 370
+ + H +IHRD+KP NI + + V++ DFG AR L+ D E+A T Y
Sbjct: 137 IGFCHSHN--IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA---TRWYR 191
Query: 371 APEVIQCE-PYSEKSDVYSFGIILNEIITG 399
APE++ + Y + DV++ G ++ E+ G
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 134 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 190
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 130 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 186
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 231
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+I + ++Y+H V+HRDLKPSN+ L+ ++I DFG AR ++D + TG
Sbjct: 132 QILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLAR-VADPDHDHTGFLTEYV 188
Query: 369 ----YMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y APE+ + + Y++ D++S G IL E+++ + K Y
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 379 PYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y E D++S G I+ E++ + +DY
Sbjct: 195 GYKENVDIWSVGCIMGEMVRHKILFPGRDY 224
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 305 ERLARAL-EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA- 362
ER++ L ++ +++LH +IHRDLKPSNI + ++I DFG AR M
Sbjct: 164 ERMSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT 221
Query: 363 -LTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
T Y APEVI Y E D++S G I+ E++ + +DY
Sbjct: 222 PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 268
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 80/197 (40%), Gaps = 59/197 (29%)
Query: 306 RLARALEIAQAMQYLHEQ-------KPKVIHRDLKPSNIFLDDAKHVRIADFGHA----- 353
RLA + + + + YLH + KP + HRDL N+ + + I+DFG +
Sbjct: 115 RLAHS--VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTG 172
Query: 354 -RFLSDGE-----MALTGTFVYMAPEVIQ-------CEPYSEKSDVYSFGIILNEII--- 397
R + GE ++ GT YMAPEV++ E ++ D+Y+ G+I EI
Sbjct: 173 NRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRC 232
Query: 398 -------------------TGNHPYIEKDYKPAKIAMEVGEGKLRPALPEEDGQ----LR 434
GNHP E + + V K RP PE + +R
Sbjct: 233 TDLFPGESVPEYQMAFQTEVGNHPTFE------DMQVLVSREKQRPKFPEAWKENSLAVR 286
Query: 435 ELIELICLSWDGDASVR 451
L E I WD DA R
Sbjct: 287 SLKETIEDCWDQDAEAR 303
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 379 PYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y E D++S G I+ E++ + +DY
Sbjct: 202 GYKENVDIWSVGCIMGEMVRHKILFPGRDY 231
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 379 PYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y E D++S G I+ E++ + +DY
Sbjct: 194 GYKENVDIWSVGCIMGEMVRHKILFPGRDY 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 140 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 199
Query: 379 PYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y E D++S G I+ E++ + +DY
Sbjct: 200 GYKENVDIWSVGCIMGEMVRHKILFPGRDY 229
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 379 PYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y E D++S G I+ E++ + +DY
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 379 PYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y E D++S G I+ E++ + +DY
Sbjct: 202 GYKENVDIWSVGCIMGEMVRHKILFPGRDY 231
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 379 PYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y E D++S G I+ E++ + +DY
Sbjct: 201 GYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTFV--- 368
+ + + +LH ++HRDLKP NI + V++ADFG AR S +MAL V
Sbjct: 120 QFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALFPVVVTLW 176
Query: 369 YMAPEVIQCEPYSEKSDVYSFGIILNEII 397
Y APEV+ Y+ D++S G I E+
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 379 PYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y E D++S G I+ E++ + +DY
Sbjct: 195 GYKENVDIWSVGCIMGEMVRHKILFPGRDY 224
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 179 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 238
Query: 379 PYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y E D++S G I+ E++ + +DY
Sbjct: 239 GYKENVDIWSVGCIMGEMVRHKILFPGRDY 268
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 146 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 205
Query: 379 PYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y E D++S G I+ E++ + +DY
Sbjct: 206 GYKENVDLWSVGCIMGEMVCHKILFPGRDY 235
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH + + H DLKP NI L D ++I DFG A + G + G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLS 357
F ER A + I +A+QYLH + HRD+KP N+ + +++ DFG A+ +
Sbjct: 158 FTEREASEIXKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215
Query: 358 DGEMALTGTFV--YMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
T + Y+APEV+ E Y + D +S G+I ++ G P+
Sbjct: 216 SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 321 HEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMA--LTGTFVYMAPEVIQCE 378
H +IHRDLKPSNI + ++I DFG AR M T Y APEVI
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 379 PYSEKSDVYSFGIILNEIITGNHPYIEKDY 408
Y E D++S G I+ E++ + +DY
Sbjct: 195 GYKENVDLWSVGCIMGEMVCHKILFPGRDY 224
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 121/291 (41%), Gaps = 65/291 (22%)
Query: 199 LQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFF------AQEVDTLSR 250
L + +GQG TAN++R + G A+K N ++F +E + L +
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVF---------NNISFLRPVDVQMREFEVLKK 63
Query: 251 QRHRFVLQLMGACLEPPYR-GWLVTEL-----LGTTLKEWLHGLGSQRRKERMVPLPPFE 304
H+ +++L E R L+ E L T L+E + G P
Sbjct: 64 LNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGL-----------PES 112
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHV-RIADFGHARFLSDGE 360
E L ++ M +L E ++HR++KP NI +D + V ++ DFG AR L D E
Sbjct: 113 EFLIVLRDVVGGMNHLREN--GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170
Query: 361 --MALTGTFVYMAPEVIQ--------CEPYSEKSDVYSFGIILNEIITGNHPY--IEKDY 408
++L GT Y+ P++ + + Y D++S G+ TG+ P+ E
Sbjct: 171 QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR 230
Query: 409 KPAKIAMEVGEGKLRPALP----EEDGQLRELIELICLSWDGDASVRPSFS 455
+ ++ ++ GK A+ E+G + W GD V S S
Sbjct: 231 RNKEVMYKIITGKPSGAISGVQKAENGP---------IDWSGDMPVSCSLS 272
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH + + H DLKP NI L D ++I DFG A + G + G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 11/109 (10%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLS 357
F ER A + I +A+QYLH + HRD+KP N+ + +++ DFG A+ +
Sbjct: 112 FTEREASEIMKSIGEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ET 168
Query: 358 DGEMALTG---TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
+LT T Y+APEV+ E Y + D++S G+I+ ++ G P+
Sbjct: 169 TSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH + + H DLKP NI L D ++I DFG A + G + G
Sbjct: 121 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 178
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH + + H DLKP NI L D ++I DFG A + G + G
Sbjct: 121 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 178
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH ++ H DLKP NI L D ++I DFG A + G + G
Sbjct: 122 QILNGVYYLH--SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH + + H DLKP NI L D ++I DFG A + G + G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLS 357
F ER A + +I A+Q+LH + HRD+KP N+ + +++ DFG A+ +
Sbjct: 106 FTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 163
Query: 358 DGEMAL-TGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
+ T Y+APEV+ E Y + D++S G+I+ ++ G P+
Sbjct: 164 QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH + + H DLKP NI L D ++I DFG A + G + G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH---VRIADFGHARFLS 357
F ER A + +I A+Q+LH + HRD+KP N+ + +++ DFG A+ +
Sbjct: 125 FTEREAAEIMRDIGTAIQFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182
Query: 358 DGEMAL-TGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPY 403
+ T Y+APEV+ E Y + D++S G+I+ ++ G P+
Sbjct: 183 QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH + + H DLKP NI L D ++I DFG A + G + G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH + + H DLKP NI L D ++I DFG A + G + G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 24/218 (11%)
Query: 193 DPKEIDLQEKIGQGT--TANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSR 250
D +L + IG G A + R VAVK + E +E+
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVK-----YIERGEKIAANVKREIINHRS 71
Query: 251 QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARA 310
RH +++ L P + ++ G L E + G E F ++L
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF----FFQQLISG 127
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDD--AKHVRIADFGHAR--FLSDGEMALTGT 366
+ AMQ V HRDLK N LD A ++I DFG+++ L + GT
Sbjct: 128 VSYCHAMQ--------VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGT 179
Query: 367 FVYMAPEVIQCEPYSEK-SDVYSFGIILNEIITGNHPY 403
Y+APEV+ + Y K +DV+S G+ L ++ G +P+
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH + + H DLKP NI L D ++I DFG A + G + G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH + + H DLKP NI L D ++I DFG A + G + G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH + + H DLKP NI L D ++I DFG A + G + G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK----HVRIADFGHARFLSDGE--MALTG 365
+I + YLH + + H DLKP NI L D ++I DFG A + G + G
Sbjct: 122 QILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFG 179
Query: 366 TFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
T ++APE++ EP ++D++S G+I +++G P++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 107 LQEELARSFFWQVLEAVRHCHNXG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 165 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFL--DDAKHVRIADFGHARFLSDGEMALT--GTF 367
+I + ++++H+ ++H DLKP NI DAK ++I DFG AR E GT
Sbjct: 195 QICEGIRHMHQMY--ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTP 252
Query: 368 VYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYI 404
++APEV+ + S +D++S G+I +++G P++
Sbjct: 253 EFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFL 289
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 146 LQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 203
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 204 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 249
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 159 LQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 216
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 217 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 262
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 154 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 212 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 140 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 139 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 127 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 139 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 111 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 168
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 169 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 139 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 139 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 197 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 127 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 140 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 126 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 183
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 184 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 126 LQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 183
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 184 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 127 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 185 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 140 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 140 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 198 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 111 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 168
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 169 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 134 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 191
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 192 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 237
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 112 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 112 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 107 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 165 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 112 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 170 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 212 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 13/103 (12%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAK--HVRIADFGHAR---FLSDGEM----A 362
+I A+ YLH Q + HRD+KP N K +++ DFG ++ L++GE
Sbjct: 176 QIFSALHYLHNQG--ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTT 233
Query: 363 LTGTFVYMAPEVIQC--EPYSEKSDVYSFGIILNEIITGNHPY 403
GT ++APEV+ E Y K D +S G++L+ ++ G P+
Sbjct: 234 KAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 154 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 212 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 107 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 165 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 7/106 (6%)
Query: 303 FEERLARAL--EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDG 359
+E LAR+ ++ +A+++ H V+HRD+K NI +D + +++ DFG L D
Sbjct: 110 LQEELARSFFWQVLEAVRHCH--NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 167
Query: 360 EMA-LTGTFVYMAPEVIQCEPYSEKS-DVYSFGIILNEIITGNHPY 403
GT VY PE I+ Y +S V+S GI+L +++ G+ P+
Sbjct: 168 VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 213
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 33/237 (13%)
Query: 180 VTVSQAKMNGWYIDPKEIDLQEKIGQGTTANIYRAIWR--GLDVAVKCI---YPDFFHTN 234
V V Q + +Y D+ E++G G ++R + + G K I YP +T
Sbjct: 42 VEVKQGSVYDYY------DILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV 95
Query: 235 ENAVTFFAQEVDTLSRQRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRK 294
+N E+ +++ H ++ L A E Y L+ E L E + ++ K
Sbjct: 96 KN-------EISIMNQLHHPKLINLHDA-FEDKYEMVLILEFLSGG--ELFDRIAAEDYK 145
Query: 295 ERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLD--DAKHVRIADFGH 352
E + + + ++++HE ++H D+KP NI + A V+I DFG
Sbjct: 146 MSEA------EVINYMRQACEGLKHMHEHS--IVHLDIKPENIMCETKKASSVKIIDFGL 197
Query: 353 ARFLSDGEMA--LTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKD 407
A L+ E+ T T + APE++ EP +D+++ G++ +++G P+ +D
Sbjct: 198 ATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED 254
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 20/111 (18%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHV---RIADFGHARFLS-DGE------- 360
++A A+ +LH + + HRDLKP NI + V +I DFG + +G+
Sbjct: 119 DVASALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTP 176
Query: 361 --MALTGTFVYMAPEVIQC-----EPYSEKSDVYSFGIILNEIITGNHPYI 404
+ G+ YMAPEV++ Y ++ D++S G+IL +++G P++
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 120/291 (41%), Gaps = 65/291 (22%)
Query: 199 LQEKIGQGTTANIYRAIWR--GLDVAVKCIYPDFFHTNENAVTFF------AQEVDTLSR 250
L + +GQG TAN++R + G A+K N ++F +E + L +
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVF---------NNISFLRPVDVQMREFEVLKK 63
Query: 251 QRHRFVLQLMGACLEPPYR-GWLVTEL-----LGTTLKEWLHGLGSQRRKERMVPLPPFE 304
H+ +++L E R L+ E L T L+E + G P
Sbjct: 64 LNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGL-----------PES 112
Query: 305 ERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFL---DDAKHV-RIADFGHARFLSDGE 360
E L ++ M +L E ++HR++KP NI +D + V ++ DFG AR L D E
Sbjct: 113 EFLIVLRDVVGGMNHLREN--GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170
Query: 361 --MALTGTFVYMAPEVIQ--------CEPYSEKSDVYSFGIILNEIITGNHPY--IEKDY 408
+ L GT Y+ P++ + + Y D++S G+ TG+ P+ E
Sbjct: 171 QFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR 230
Query: 409 KPAKIAMEVGEGKLRPALP----EEDGQLRELIELICLSWDGDASVRPSFS 455
+ ++ ++ GK A+ E+G + W GD V S S
Sbjct: 231 RNKEVMYKIITGKPSGAISGVQKAENGP---------IDWSGDMPVSCSLS 272
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 54/109 (49%), Gaps = 16/109 (14%)
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD-------------GEM 361
+A++ LH VIHRDLKPSN+ ++ +++ DFG AR + + G +
Sbjct: 123 RAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 362 ALTGTFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
T Y APEV + YS DV+S G IL E+ + +DY+
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 308 ARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTGTF 367
A L Q ++YLH+ ++HRDLKP+N+ LD+ +++ADFG A+ A
Sbjct: 116 AYMLMTLQGLEYLHQHW--ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQV 173
Query: 368 V---YMAPEVI-QCEPYSEKSDVYSFGIILNEII 397
V Y APE++ Y D+++ G IL E++
Sbjct: 174 VTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 29/168 (17%)
Query: 251 QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARA 310
+ ++F+ LM + ELLG E+L KE P A
Sbjct: 110 KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFL--------KENNFQPYPLPHVRHMA 161
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH-------------------VRIADFG 351
++ A+++LHE + + H DLKP NI +++ +R+ADFG
Sbjct: 162 YQLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 219
Query: 352 HARFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITG 399
A F + + T Y PEVI +++ DV+S G IL E G
Sbjct: 220 SATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 29/168 (17%)
Query: 251 QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARA 310
+ ++F+ LM + ELLG E+L KE P A
Sbjct: 87 KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFL--------KENNFQPYPLPHVRHMA 138
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH-------------------VRIADFG 351
++ A+++LHE + + H DLKP NI +++ +R+ADFG
Sbjct: 139 YQLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 196
Query: 352 HARFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITG 399
A F + + T Y PEVI +++ DV+S G IL E G
Sbjct: 197 SATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 29/168 (17%)
Query: 251 QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARA 310
+ ++F+ LM + ELLG E+L KE P A
Sbjct: 78 KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFL--------KENNFQPYPLPHVRHMA 129
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH-------------------VRIADFG 351
++ A+++LHE + + H DLKP NI +++ +R+ADFG
Sbjct: 130 YQLCHALRFLHENQ--LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 187
Query: 352 HARFLSDGEMALTGTFVYMAPEVIQCEPYSEKSDVYSFGIILNEIITG 399
A F + + T Y PEVI +++ DV+S G IL E G
Sbjct: 188 SATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 24/218 (11%)
Query: 193 DPKEIDLQEKIGQGT--TANIYRAIWRGLDVAVKCIYPDFFHTNENAVTFFAQEVDTLSR 250
D +L + IG G A + R VAVK + E +E+
Sbjct: 16 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVK-----YIERGEKIDENVKREIINHRS 70
Query: 251 QRHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARA 310
RH +++ L P + ++ G L E + G E F ++L
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF----FFQQLISG 126
Query: 311 LEIAQAMQYLHEQKPKVIHRDLKPSNIFLDD--AKHVRIADFGHAR--FLSDGEMALTGT 366
+ AMQ V HRDLK N LD A ++I DFG+++ L + GT
Sbjct: 127 VSYCHAMQ--------VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGT 178
Query: 367 FVYMAPEVIQCEPYSEK-SDVYSFGIILNEIITGNHPY 403
Y+APEV+ + Y K +DV+S G+ L ++ G +P+
Sbjct: 179 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 216
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 25/169 (14%)
Query: 252 RHRFVLQLMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARAL 311
RH +++ L P + ++ G L E + G F E AR
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR------------FSEDEARFF 121
Query: 312 --EIAQAMQYLHEQKPKVIHRDLKPSNIFLDD--AKHVRIADFGHAR--FLSDGEMALTG 365
++ + Y H + + HRDLK N LD A ++I DFG+++ L + G
Sbjct: 122 FQQLLSGVSYCHSMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVG 179
Query: 366 TFVYMAPEVIQCEPYSEK-SDVYSFGIILNEIITGNHPYIE----KDYK 409
T Y+APEV+ + Y K +DV+S G+ L ++ G +P+ + +DY+
Sbjct: 180 TPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYR 228
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 20/208 (9%)
Query: 201 EKIGQGTTANIYRAIWRGLD--VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +++A R VA+K + D +E + +E+ L +H+ +++
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLD--DDDEGVPSSALREICLLKELKHKNIVR 65
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L L + LV E LK++ E + ++ + +
Sbjct: 66 LHDV-LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSF---------LFQLLKGLG 115
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAPEVI 375
+ H + V+HRDLKP N+ ++ +++ADFG AR + T Y P+V+
Sbjct: 116 FCHSRN--VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVL 173
Query: 376 -QCEPYSEKSDVYSFGIILNEIITGNHP 402
+ YS D++S G I E+ P
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAARP 201
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 80/199 (40%), Gaps = 34/199 (17%)
Query: 272 LVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLAR--ALEIAQAMQYLHEQKPKVIH 329
+V ELLG + +++ G PF R A +I +++ +LH K + H
Sbjct: 94 IVFELLGLSTYDFIKENG----------FLPFRLDHIRKMAYQICKSVNFLHSNK--LTH 141
Query: 330 RDLKPSNIFLDDAKH-------------------VRIADFGHARFLSDGEMALTGTFVYM 370
DLKP NI + + +++ DFG A + + L T Y
Sbjct: 142 TDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYR 201
Query: 371 APEVIQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYKPAKIAMEVGEGKLRPALPEED 430
APEVI +S+ DV+S G IL E G + D K ME G L P +
Sbjct: 202 APEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPL-PKHMIQK 260
Query: 431 GQLRELIELICLSWDGDAS 449
+ R+ L WD +S
Sbjct: 261 TRKRKYFHHDRLDWDEHSS 279
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 18/176 (10%)
Query: 236 NAVTFFAQEVDTLSRQRHRFVLQLMGACL-EPPYRGWLVTELLGTTLKEWLHGLGSQRRK 294
N +E+ L R RH+ V+QL+ E + ++V E ++E L + +R
Sbjct: 48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRF- 106
Query: 295 ERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHAR 354
P + ++ ++YLH Q ++H+D+KP N+ L ++I+ G A
Sbjct: 107 -------PVCQAHGYFCQLIDGLEYLHSQG--IVHKDIKPGNLLLTTGGTLKISALGVAE 157
Query: 355 FL-----SDGEMALTGTFVYMAPEVIQ-CEPYSE-KSDVYSFGIILNEIITGNHPY 403
L D G+ + PE+ + +S K D++S G+ L I TG +P+
Sbjct: 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 20/111 (18%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKHV---RIADF---------GHARFLSDG 359
++A A+ +LH + + HRDLKP NI + V +I DF G +S
Sbjct: 119 DVASALDFLHNKG--IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP 176
Query: 360 EMAL-TGTFVYMAPEVIQC-----EPYSEKSDVYSFGIILNEIITGNHPYI 404
E+ G+ YMAPEV++ Y ++ D++S G+IL +++G P++
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFV 227
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD-------------GEM 361
+A++ LH VIHRDLKPSN+ ++ +++ DFG AR + + G
Sbjct: 123 RAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 362 ALTGTFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
T Y APEV + YS DV+S G IL E+ + +DY+
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 16/109 (14%)
Query: 315 QAMQYLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSD-------------GEM 361
+A++ LH VIHRDLKPSN+ ++ +++ DFG AR + + G
Sbjct: 123 RAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 362 ALTGTFVYMAPEV-IQCEPYSEKSDVYSFGIILNEIITGNHPYIEKDYK 409
T Y APEV + YS DV+S G IL E+ + +DY+
Sbjct: 181 EYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 168 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 225
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 257
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 164 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 221
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 158 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 215
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 247
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 166 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 223
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 255
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 164 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 221
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 135 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 192
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 224
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH--VRIADFGHARFLSDGEMALTGTF 367
A I Q + LH K ++IH DLKP NI L +++ DFG + + +
Sbjct: 206 AHSILQCLDALH--KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSR 263
Query: 368 VYMAPEVIQCEPYSEKSDVYSFGIILNEIITG 399
Y APEVI Y D++S G IL E++TG
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 209 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 266
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 298
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH--VRIADFGHARFLSDGEMALTGTF 367
A I Q + LH K ++IH DLKP NI L +++ DFG + + +
Sbjct: 206 AHSILQCLDALH--KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSR 263
Query: 368 VYMAPEVIQCEPYSEKSDVYSFGIILNEIITG 399
Y APEVI Y D++S G IL E++TG
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 143 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 200
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 142 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 199
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 130 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 130 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 83/162 (51%), Gaps = 23/162 (14%)
Query: 272 LVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRD 331
+V E+LG L + ++ + R +PL + +++++ L + + Y+H ++ +IH D
Sbjct: 107 MVFEVLGENLLALI-----KKYEHRGIPLI-YVKQISKQLLLG--LDYMH-RRCGIIHTD 157
Query: 332 LKPSNIFLD------DAKHVRIADFGHARFLSDGEMALTGTFVYMAPEVIQCEPYSEKSD 385
+KP N+ ++ + ++IAD G+A + + T Y +PEV+ P+ +D
Sbjct: 158 IKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGAD 217
Query: 386 VYSFGIILNEIITGN--------HPYIEKDYKPAKIAMEVGE 419
++S ++ E+ITG+ H Y + D A+I +GE
Sbjct: 218 IWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGE 259
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 83/162 (51%), Gaps = 23/162 (14%)
Query: 272 LVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQYLHEQKPKVIHRD 331
+V E+LG L + ++ + R +PL + +++++ L + + Y+H ++ +IH D
Sbjct: 107 MVFEVLGENLLALI-----KKYEHRGIPLI-YVKQISKQLLLG--LDYMH-RRCGIIHTD 157
Query: 332 LKPSNIFLD------DAKHVRIADFGHARFLSDGEMALTGTFVYMAPEVIQCEPYSEKSD 385
+KP N+ ++ + ++IAD G+A + + T Y +PEV+ P+ +D
Sbjct: 158 IKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGAD 217
Query: 386 VYSFGIILNEIITGN--------HPYIEKDYKPAKIAMEVGE 419
++S ++ E+ITG+ H Y + D A+I +GE
Sbjct: 218 IWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGE 259
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 48/187 (25%)
Query: 313 IAQAMQYLHE---------QKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGE--- 360
+++ + YLHE KP + HRD K N+ L +ADFG A G+
Sbjct: 121 MSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPG 180
Query: 361 --MALTGTFVYMAPEVIQCEPYSEKS-----DVYSFGIILNEIIT--------------- 398
GT YMAPEV++ ++ D+Y+ G++L E+++
Sbjct: 181 DTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLP 240
Query: 399 -----GNHPYIEKDYKPAKIAMEVGEGKLRPALPE---EDGQLRELIELICLSWDGDASV 450
G HP +E ++ V K+RP + + + L +L I WD DA
Sbjct: 241 FEEEIGQHPSLE------ELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEA 294
Query: 451 RPSFSSI 457
R S +
Sbjct: 295 RLSAGCV 301
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 142 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 199
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 231
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 134 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 191
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 223
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 20/208 (9%)
Query: 201 EKIGQGTTANIYRAIWRGLD--VAVKCIYPDFFHTNENAVTFFAQEVDTLSRQRHRFVLQ 258
EKIG+GT +++A R VA+K + D +E + +E+ L +H+ +++
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLD--DDDEGVPSSALREICLLKELKHKNIVR 65
Query: 259 LMGACLEPPYRGWLVTELLGTTLKEWLHGLGSQRRKERMVPLPPFEERLARALEIAQAMQ 318
L L + LV E LK++ E + ++ + +
Sbjct: 66 LHDV-LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSF---------LFQLLKGLG 115
Query: 319 YLHEQKPKVIHRDLKPSNIFLDDAKHVRIADFGHARFLSDGEMALTG---TFVYMAPEVI 375
+ H + V+HRDLKP N+ ++ +++A+FG AR + T Y P+V+
Sbjct: 116 FCHSRN--VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVL 173
Query: 376 -QCEPYSEKSDVYSFGIILNEIITGNHP 402
+ YS D++S G I E+ P
Sbjct: 174 FGAKLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 130 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 149 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 206
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 238
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 138 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 195
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 227
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 4/92 (4%)
Query: 310 ALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDAKH--VRIADFGHARFLSDGEMALTGTF 367
A I Q + LH K ++IH DLKP NI L +++ DFG + + +
Sbjct: 206 AHSILQCLDALH--KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSR 263
Query: 368 VYMAPEVIQCEPYSEKSDVYSFGIILNEIITG 399
Y APEVI Y D++S G IL E++TG
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 312 EIAQAMQYLHEQKPKVIHRDLKPSNIFLD-DAKHVRIADFGHARFLSDGE--MALTGTFV 368
++ +++ Y+H + HRD+KP N+ LD D +++ DFG A+ L GE ++ +
Sbjct: 131 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY 188
Query: 369 YMAPEVI-QCEPYSEKSDVYSFGIILNEIITG 399
Y APE+I Y+ DV+S G +L E++ G
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLG 220
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,675,303
Number of Sequences: 62578
Number of extensions: 560823
Number of successful extensions: 3681
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 170
Number of HSP's that attempted gapping in prelim test: 1363
Number of HSP's gapped (non-prelim): 1164
length of query: 472
length of database: 14,973,337
effective HSP length: 102
effective length of query: 370
effective length of database: 8,590,381
effective search space: 3178440970
effective search space used: 3178440970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)