Query 039092
Match_columns 535
No_of_seqs 304 out of 1040
Neff 5.1
Searched_HMMs 13730
Date Mon Mar 25 10:07:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039092.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039092hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1i9za_ d.151.1.2 (A:) Synapto 100.0 1.1E-73 7.9E-78 587.3 32.9 231 263-510 99-329 (345)
2 d2imqx1 d.151.1.2 (X:3-282) Sa 100.0 3.4E-41 2.4E-45 324.3 22.6 208 264-498 69-280 (280)
3 d1zwxa1 d.151.1.3 (A:41-333) S 98.6 7.3E-08 5.3E-12 89.2 9.5 72 304-387 119-194 (293)
4 d2ddra1 d.151.1.3 (A:7-305) Sp 98.6 6.2E-09 4.5E-13 97.0 1.9 71 306-388 121-195 (299)
5 d1wdua_ d.151.1.1 (A:) Endonuc 98.1 4.6E-06 3.4E-10 74.8 9.1 135 309-496 85-226 (228)
6 d1vyba_ d.151.1.1 (A:) Endonuc 96.4 0.0074 5.4E-07 53.5 9.8 55 312-388 95-149 (236)
7 d2a40b1 d.151.1.1 (B:1-260) De 95.5 0.0029 2.1E-07 54.2 2.7 49 322-388 126-174 (260)
8 d1sr4b_ d.151.1.1 (B:) Cytolet 94.6 0.037 2.7E-06 48.6 7.7 13 374-386 169-181 (261)
9 d2f1na1 d.151.1.1 (A:1-250) Cy 90.8 0.16 1.1E-05 44.9 6.1 60 308-385 118-177 (250)
10 d1hd7a_ d.151.1.1 (A:) DNA rep 85.9 0.12 8.9E-06 46.0 1.7 34 91-126 18-52 (275)
11 d1akoa_ d.151.1.1 (A:) DNA-rep 78.8 0.35 2.5E-05 41.2 1.7 34 462-495 228-267 (268)
12 d1sr4b_ d.151.1.1 (B:) Cytolet 50.9 2.6 0.00019 36.0 1.6 32 94-125 7-42 (261)
13 d2f1na1 d.151.1.1 (A:1-250) Cy 33.6 6.2 0.00045 33.9 1.2 32 94-125 7-42 (250)
14 d1hd7a_ d.151.1.1 (A:) DNA rep 32.6 2.5 0.00018 37.0 -1.7 34 462-495 239-274 (275)
No 1
>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00 E-value=1.1e-73 Score=587.27 Aligned_cols=231 Identities=36% Similarity=0.622 Sum_probs=212.5
Q ss_pred CCCeEEEEeeeeeceEEEEEEeccccccccceeeeEEeecccccccCceEEEEEEEEcCeEEEEEcccCCCCCCCccHHH
Q 039092 263 PSRYCLVASKQMVGIFLTVWVKSDLRDSVRNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKEGDELR 342 (535)
Q Consensus 263 ~~~Y~~V~S~qmvGI~L~Vfvr~~l~~~I~~v~~s~VgtGi~G~lGNKGaVsvs~~i~~ts~cFVn~HLaAge~e~d~~r 342 (535)
+..|++|++.+|+||+|+||+|+++.++|+++.++++++|++|++||||||+|+|.+++++||||||||+||+++ ..+
T Consensus 99 ~~~Y~~v~~~~~~g~~l~vf~r~~~~~~i~~v~~~~~~~g~~g~~gnKGaV~vr~~i~~t~l~fvn~HL~ag~~~--~~~ 176 (345)
T d1i9za_ 99 GPGYVQLRSGQLVGTALMIFCKESCLPSIKNVEGTVKKTGLGGVSGNKGAVAIRFDYEDTGLCFITSHLAAGYTN--YDE 176 (345)
T ss_dssp SCCEEEEEEEEETTEEEEEEEEGGGGGGEEEEEEEEEECCCC----CCEEEEEEEEETTEEEEEEEEECCCCSSC--HHH
T ss_pred CCCeEEEEEecccCcEEEEEEcchhccccccceeEEEecCcCCcccCCceEEEEEEECCEEEEEEEecccCcccc--hHH
Confidence 457999999999999999999999999999999999999999999999999999999999999999999999864 568
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCCccccccceEEEeccccceeccCHHHHHHHHHhccHHHHHhhhHHHHHHHcCCCC
Q 039092 343 RNSDVMEIIRKTRFPKVHGIGDENSPQTILEHDRIIWLGDLNYRIALSYRFAKALVEMRNWRALLENDQLRIEQRKGHVF 422 (535)
Q Consensus 343 RN~D~~eIlr~~~F~~~~~~~~~~~p~~I~dhD~ifw~GDLNYRI~l~~~~v~~li~~~~~~~LL~~DQL~~e~~~g~vF 422 (535)
||+|+.+|++++.|.. .+.+.++|+|||+||||||+++++..+.+++..++|..|+++|||+.++..+.+|
T Consensus 177 R~~~~~~i~~~l~~~~---------~~~~~~~d~v~~~GDlN~R~~~~~~~~~~~i~~~~~~~l~~~dql~~~~~~~~~~ 247 (345)
T d1i9za_ 177 RDHDYRTIASGLRFRR---------GRSIFNHDYVVWFGDFNYRISLTYEEVVPCIAQGKLSYLFEYDQLNKQMLTGKVF 247 (345)
T ss_dssp HHHHHHHHHHHCCCGG---------GCCTTSSSEEEEEEECCCCBSSCHHHHHHHHHTTCHHHHHTTBHHHHHHHTTSSS
T ss_pred HHHHHHHHHHhhcccc---------ccccccCceeEEeccccccccCchhhhHhhhhccchhHHHHHHHHHhhhhccCcc
Confidence 9999999999998853 3467789999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccccCCCCCCCCCCcCCCCCCCCCCCCccccccccceeeecCCceeeeeeccccccCCCcCccceEEEEEeeec
Q 039092 423 NGWSEGKIYFPPTYKYSNNSDRYAGEDRHPKEKRRTPAWCDRILWYGRGLHQLSYVRGESRFSDHRPVYSIFLAEVESVN 502 (535)
Q Consensus 423 ~gf~Eg~I~F~PTYKy~~~Sd~Y~~~~~~~~~KkR~PAWCDRILw~g~~i~qlsY~~~e~~~SDHrPV~A~F~v~v~~~~ 502 (535)
.||.|++|+|+|||||+.+++.|++ +.|+|+|||||||||++. +.++.|.+.++++||||||+|+|.++|+.++
T Consensus 248 ~~~~E~~I~F~PTyk~~~~~~~yd~-----~~k~RiPsWcDRIL~~~~-~~~~~Y~s~~~~~SDH~PV~a~f~v~v~~~~ 321 (345)
T d1i9za_ 248 PFFSELPITFPPTYKFDIGTDIYDT-----SDKHRVPAWTDRILYRGE-LVPHSYQSVPLYYSDHRPIYATYEANIVKVD 321 (345)
T ss_dssp TTCBCCCCCSCCCBCBCTTSSCBCC-----STTCCCCBCCEEEEEESS-CEEEEEEECCCCSSSBCCEEEEEEEEEEEEC
T ss_pred cCcccCCCCCCCCCeEECCCCccCC-----CCCeeCccccceEEeeCc-eeeeeeeccCCCCCCcccEEEEEEEEEEEEC
Confidence 9999999999999999999999984 678999999999999975 7788999999999999999999999999999
Q ss_pred hhhhhhhc
Q 039092 503 RSRIKKSM 510 (535)
Q Consensus 503 ~~k~k~~~ 510 (535)
+++.+...
T Consensus 322 ~~~~~~~~ 329 (345)
T d1i9za_ 322 REKKKILF 329 (345)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88765443
No 2
>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]}
Probab=100.00 E-value=3.4e-41 Score=324.32 Aligned_cols=208 Identities=25% Similarity=0.409 Sum_probs=172.4
Q ss_pred CCeEEEEeeeeeceEEEEEEeccccccccceeeeEEeecccccccCceEEEEEEEEcCeEEEEEcccCCCCCCCccHHHH
Q 039092 264 SRYCLVASKQMVGIFLTVWVKSDLRDSVRNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKEGDELRR 343 (535)
Q Consensus 264 ~~Y~~V~S~qmvGI~L~Vfvr~~l~~~I~~v~~s~VgtGi~G~lGNKGaVsvs~~i~~ts~cFVn~HLaAge~e~d~~rR 343 (535)
..|..+...+++|+.++||++..+..+.. ....+++|+++.++|||+|.+++.+.++.|+|+|+||.++..+. .+|
T Consensus 69 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~i~~~~~~~in~hl~~~~~~~--~~~ 144 (280)
T d2imqx1 69 KGYTKLKNTITETMGLTVYCLEKHLDQNT--LKNETIIVTVDDQKKSGGIVTSFTIYNKRFSFTTSRMSDEDVTS--TNT 144 (280)
T ss_dssp TTEEEEEEEECSSEEEEEEEEGGGCCTTT--CCCEEEEEECSTTSCSEEEEEEEEETTEEEEEEEEECCTTCCCT--TSS
T ss_pred CCeeEEEeeeeeceEEEEEEcccccccce--ecceeEeccCCcccCCcEEEEEEEECCEEEEeecccCCccchhH--HHH
Confidence 47889999999999999999999876654 45567788889999999999999999999999999999987542 122
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCCccccccceEEEeccccceeccCHHHHHHHHHhccHHHHHhhhHHHHHHHcCCCCC
Q 039092 344 NSDVMEIIRKTRFPKVHGIGDENSPQTILEHDRIIWLGDLNYRIALSYRFAKALVEMRNWRALLENDQLRIEQRKGHVFN 423 (535)
Q Consensus 344 N~D~~eIlr~~~F~~~~~~~~~~~p~~I~dhD~ifw~GDLNYRI~l~~~~v~~li~~~~~~~LL~~DQL~~e~~~g~vF~ 423 (535)
..+... .. ........++++||+||||+|........+..+....+..++..||+.... .+.+|.
T Consensus 145 ~~~~~~---------~~-----~~~~~~~~~~~vi~~GD~N~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 209 (280)
T d2imqx1 145 KYAYDT---------RL-----DYSKKDDPSDFLFWIGDLNVRVETNATHAKSLVDQNNIDGLMAFDQLKKAK-EQKLFD 209 (280)
T ss_dssp SSSCCG---------GG-----CTTSSSSCCSEEEEEEECSCCBCSCHHHHHHHHHTTCHHHHHTTBTHHHHH-HTTSST
T ss_pred HHHHHH---------hh-----hhhhhccCCCeeEEecccccccccccHHHHhhhhcccchhhHHHHHHHHhh-hcchhh
Confidence 211110 00 012334567899999999999999999999999999999999999998765 578999
Q ss_pred CCcccccccCCCCCCCCCCcCCCCCCCCCCCCccccccccceeeecC---Cceeeeeec-cccccCCCcCccceEEEEE
Q 039092 424 GWSEGKIYFPPTYKYSNNSDRYAGEDRHPKEKRRTPAWCDRILWYGR---GLHQLSYVR-GESRFSDHRPVYSIFLAEV 498 (535)
Q Consensus 424 gf~Eg~I~F~PTYKy~~~Sd~Y~~~~~~~~~KkR~PAWCDRILw~g~---~i~qlsY~~-~e~~~SDHrPV~A~F~v~v 498 (535)
+|+|+++.|.|||++..+.+.|.+ +|+||||||||+++. .++..+|.+ .+...|||+||.|.|.++|
T Consensus 210 ~~~~~~~~ft~~~~~~~~~~~~~~--------~Rip~~iD~Il~~~~~~~~v~~~~y~~~~~~~~SDH~PV~a~F~l~~ 280 (280)
T d2imqx1 210 GWTEPQVTFKPTYKFKPNTDEYDL--------SATPSWTDRALYKSGTGKTIQPLSYNSLTNYKQTEHRPVLAKFRVTL 280 (280)
T ss_dssp TCBCCCCCSCCCBCBCTTSSCBCT--------TSCCBCCEEEEEECSSSCCEEEEEEEECTTCCSSSSCCEEEEEEEEC
T ss_pred ccccCCCCCCCcccccCccccCCC--------cccCccCCEEEEECccCCceEEEEEEECCCCCCCCChheEEEEEEEC
Confidence 999999999999999999988864 699999999999854 467788875 5788999999999998875
No 3
>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]}
Probab=98.57 E-value=7.3e-08 Score=89.24 Aligned_cols=72 Identities=21% Similarity=0.206 Sum_probs=47.9
Q ss_pred cccccCceEEEEEEEEcCeEEEEEcccCCCCCCCcc----HHHHHHHHHHHHHhcCCCCccCCCCCCCCccccccceEEE
Q 039092 304 MGYLGNKGSISISMSLHQTSFCFICSHLTSGQKEGD----ELRRNSDVMEIIRKTRFPKVHGIGDENSPQTILEHDRIIW 379 (535)
Q Consensus 304 ~G~lGNKGaVsvs~~i~~ts~cFVn~HLaAge~e~d----~~rRN~D~~eIlr~~~F~~~~~~~~~~~p~~I~dhD~ifw 379 (535)
.....+||.+.+.+.+.+..++|+++||.++..... ...|...+.+++..+.- ......+.||+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~v~~~Hl~~~~~~~~~~~~~~~r~~~~~~~~~~~~~------------~~~~~~~~vil 186 (293)
T d1zwxa1 119 ADRLSNKGFAYVKIMKNGKPYHIIGTHTQADDSLISKDTSRAIRAEQMQEIQTFIAK------------KNIPKDEIIFI 186 (293)
T ss_dssp GGGGBCCEEEEEEEEETTEEEEEEEEECCCCCTTSCHHHHHHHHHHHHHHHHHHHHH------------HTCCTTSEEEE
T ss_pred ccccccceEEEEEEecCCceEEEEEeeeeccCCccchhHHHHHHHHHHHHhhhhhhh------------hccCCCCcEEE
Confidence 345678999999999999999999999998854321 22344555554432210 01112357999
Q ss_pred ecccccee
Q 039092 380 LGDLNYRI 387 (535)
Q Consensus 380 ~GDLNYRI 387 (535)
+||||-.-
T Consensus 187 ~GDfN~~~ 194 (293)
T d1zwxa1 187 GGDLNVNY 194 (293)
T ss_dssp EEECCCCT
T ss_pred EeecCCCC
Confidence 99999543
No 4
>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]}
Probab=98.57 E-value=6.2e-09 Score=96.95 Aligned_cols=71 Identities=20% Similarity=0.238 Sum_probs=47.5
Q ss_pred cccCceEEEEEEEEcCeEEEEEcccCCCCCCCc----cHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccccceEEEec
Q 039092 306 YLGNKGSISISMSLHQTSFCFICSHLTSGQKEG----DELRRNSDVMEIIRKTRFPKVHGIGDENSPQTILEHDRIIWLG 381 (535)
Q Consensus 306 ~lGNKGaVsvs~~i~~ts~cFVn~HLaAge~e~----d~~rRN~D~~eIlr~~~F~~~~~~~~~~~p~~I~dhD~ifw~G 381 (535)
..+++|++.+.+.+.+..|+++++||.++.... +...|...+.+++..+. ...+...+.||++|
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~v~~~Hl~~~~~~~~~~~~~~~r~~q~~~~~~~~~------------~~~~~~~~~vi~~G 188 (299)
T d2ddra1 121 NLSNKGFVYTKIKKNDRFVHVIGTHLQAEDSMCGKTSPASVRTNQLKEIQDFIK------------NKNIPNNEYVLIGG 188 (299)
T ss_dssp -CCCCEEEEEEEEETTEEEEEEEEECCCC-------CHHHHHHHHHHHHHHHHH------------HHTCCTTSCEEEEE
T ss_pred cccceeEEEEEEecCCeEEEEEEccccCCCCccchhhhHHHHHHHHHHHhhhhh------------hhcccccceEEEEe
Confidence 467899999999999999999999999885432 22235556666654321 01112346799999
Q ss_pred cccceec
Q 039092 382 DLNYRIA 388 (535)
Q Consensus 382 DLNYRI~ 388 (535)
|||.+-.
T Consensus 189 DfN~~~~ 195 (299)
T d2ddra1 189 DMNVNKI 195 (299)
T ss_dssp ECCCCCT
T ss_pred cCCCCcc
Confidence 9998764
No 5
>d1wdua_ d.151.1.1 (A:) Endonuclease domain of TRAS1 retrotransposon (ORF2) {Silkworm (Bombyx mori) [TaxId: 7091]}
Probab=98.08 E-value=4.6e-06 Score=74.78 Aligned_cols=135 Identities=13% Similarity=0.062 Sum_probs=70.0
Q ss_pred CceEEEEEEEEcCeEEEEEcccCCCCCCCccHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccccceEEEeccccceec
Q 039092 309 NKGSISISMSLHQTSFCFICSHLTSGQKEGDELRRNSDVMEIIRKTRFPKVHGIGDENSPQTILEHDRIIWLGDLNYRIA 388 (535)
Q Consensus 309 NKGaVsvs~~i~~ts~cFVn~HLaAge~e~d~~rRN~D~~eIlr~~~F~~~~~~~~~~~p~~I~dhD~ifw~GDLNYRI~ 388 (535)
..+.+.+.+......++++|+|++.+.... ..-+.+..+++.. ..+.++++||||-.-.
T Consensus 85 ~~~~~~~~i~~~~~~i~v~~~y~~~~~~~~---~~~~~l~~~~~~~------------------~~~~vIi~GDfN~~~~ 143 (228)
T d1wdua_ 85 TNNIVVVGIRTRAWEITLVSYYFEPDKPIE---SYLEQIKRVERKM------------------GPKRLIFGGDANAKST 143 (228)
T ss_dssp CSSEEEEEEECSSCEEEEEEEECCTTSCSH---HHHHHHHHHHHTT------------------CSSSEEEEEECCCCCG
T ss_pred CCCEEEEEEEcCCccEEEEEEEeCCcccch---HHHHHHHHHHHhc------------------CCceEEEecccccCch
Confidence 345677778888889999999998875431 2222333333321 1245889999996422
Q ss_pred c-----CHHHHHHHHHhccHHHHHhhhHHHHHHHcCCCCCCCcccccccCCCCCCCCCCcCCCCCCCCCCCCcccccccc
Q 039092 389 L-----SYRFAKALVEMRNWRALLENDQLRIEQRKGHVFNGWSEGKIYFPPTYKYSNNSDRYAGEDRHPKEKRRTPAWCD 463 (535)
Q Consensus 389 l-----~~~~v~~li~~~~~~~LL~~DQL~~e~~~g~vF~gf~Eg~I~F~PTYKy~~~Sd~Y~~~~~~~~~KkR~PAWCD 463 (535)
. ...... .|...+..... .-..-.+.|||..- ....+.+++.|
T Consensus 144 ~~~~~~~~~~~~---------------~l~~~~~~~~~----~~~~~~~~~~~~~~-------------~~~~~~~~rID 191 (228)
T d1wdua_ 144 WWGSKEDDARGD---------------QLMGTLGELGL----HILNEGDVPTFDTI-------------RGGKRYQSRVD 191 (228)
T ss_dssp GGTCSSCCHHHH---------------HHHHHHHHHTC----EECCCSCCCSEEC------------------CCEECCE
T ss_pred hHhcccchhHHH---------------HHHHHHHhhCc----cccccCCccccccc-------------cCCCCCCcceE
Confidence 1 001111 11111111111 11111234554321 12356788999
Q ss_pred ceeeecCCceee-eee-ccccccCCCcCccceEEE
Q 039092 464 RILWYGRGLHQL-SYV-RGESRFSDHRPVYSIFLA 496 (535)
Q Consensus 464 RILw~g~~i~ql-sY~-~~e~~~SDHrPV~A~F~v 496 (535)
+||....-...+ .+. ..+...|||+||.+.+.+
T Consensus 192 ~~~~s~~l~~~v~~~~v~~~~~~SDH~~v~~~l~~ 226 (228)
T d1wdua_ 192 VTFCTEDMLDLIDGWRVDEDLVSSDHNGMVFNIRL 226 (228)
T ss_dssp EEEECGGGBTTEEEEEECTTSSSSSBCCEEEEECC
T ss_pred EEEECchHhhhceEEEECCCCCCCCchHeEEEEEE
Confidence 999876432222 121 234568999999876643
No 6
>d1vyba_ d.151.1.1 (A:) Endonuclease domain of LINE-1 reverse transcriptase homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.36 E-value=0.0074 Score=53.49 Aligned_cols=55 Identities=15% Similarity=0.248 Sum_probs=34.7
Q ss_pred EEEEEEEEcCeEEEEEcccCCCCCCCccHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccccceEEEeccccceec
Q 039092 312 SISISMSLHQTSFCFICSHLTSGQKEGDELRRNSDVMEIIRKTRFPKVHGIGDENSPQTILEHDRIIWLGDLNYRIA 388 (535)
Q Consensus 312 aVsvs~~i~~ts~cFVn~HLaAge~e~d~~rRN~D~~eIlr~~~F~~~~~~~~~~~p~~I~dhD~ifw~GDLNYRI~ 388 (535)
.+.+.+.+.+..++++|+|+..+.. .+ ...+++..+. .. . ...+|++||||....
T Consensus 95 ~~~~~~~~~~~~~~~~~~y~~~~~~----~~---~~~~~~~~~~--~~------------~-~~~~Il~GDfN~~~~ 149 (236)
T d1vyba_ 95 YIMVKGSIQQEELTILNIYAPNTGA----PR---FIKQVLSDLQ--RD------------L-DSHTLIMGDFNTPLS 149 (236)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSSH----HH---HHHHHHHHTT--TT------------C-CTTEEEEEECSSCSS
T ss_pred ceeeeeeeccCcceeEEeccccccc----HH---HHHhhhhhhc--cc------------c-cceeEEeeccccccc
Confidence 4567788889999999999987642 12 1233444321 10 0 124899999996443
No 7
>d2a40b1 d.151.1.1 (B:1-260) Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913]}
Probab=95.48 E-value=0.0029 Score=54.17 Aligned_cols=49 Identities=10% Similarity=0.287 Sum_probs=28.7
Q ss_pred eEEEEEcccCCCCCCCccHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccccceEEEeccccceec
Q 039092 322 TSFCFICSHLTSGQKEGDELRRNSDVMEIIRKTRFPKVHGIGDENSPQTILEHDRIIWLGDLNYRIA 388 (535)
Q Consensus 322 ts~cFVn~HLaAge~e~d~~rRN~D~~eIlr~~~F~~~~~~~~~~~p~~I~dhD~ifw~GDLNYRI~ 388 (535)
..|.+++.|+.... ...|.+....+++.+.-. .....+|++||||-..+
T Consensus 126 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~--------------~~~~~~iv~GDfN~~~~ 174 (260)
T d2a40b1 126 KEFAIVALHSAPSD----AVAEINSLYDVYLDVQQK--------------WHLNDVMLMGDFNADCS 174 (260)
T ss_dssp SEEEEEECCCCGGG----HHHHHHHHHHHHHHHHHH--------------HCCCCEEEEEECCCSTT
T ss_pred eEEEEEeeccccch----hhHHHHHHHHHHHHHHhh--------------ccCCCEEEcccccCCcc
Confidence 46778888987653 334555555555432100 01235899999996554
No 8
>d1sr4b_ d.151.1.1 (B:) Cytolethal distending toxin subunit B {Haemophilus ducreyi [TaxId: 730]}
Probab=94.65 E-value=0.037 Score=48.63 Aligned_cols=13 Identities=23% Similarity=0.248 Sum_probs=10.8
Q ss_pred cceEEEeccccce
Q 039092 374 HDRIIWLGDLNYR 386 (535)
Q Consensus 374 hD~ifw~GDLNYR 386 (535)
...+|++||||-.
T Consensus 169 ~~~~iv~GDfN~~ 181 (261)
T d1sr4b_ 169 VYSWMVVGDFNRA 181 (261)
T ss_dssp GCEEEEEEECSSC
T ss_pred CCCEEEeeecCcC
Confidence 4679999999964
No 9
>d2f1na1 d.151.1.1 (A:1-250) Cytolethal distending toxin subunit B {Escherichia coli [TaxId: 562]}
Probab=90.83 E-value=0.16 Score=44.95 Aligned_cols=60 Identities=20% Similarity=0.336 Sum_probs=35.9
Q ss_pred cCceEEEEEEEEcCeEEEEEcccCCCCCCCccHHHHHHHHHHHHHhcCCCCccCCCCCCCCccccccceEEEeccccc
Q 039092 308 GNKGSISISMSLHQTSFCFICSHLTSGQKEGDELRRNSDVMEIIRKTRFPKVHGIGDENSPQTILEHDRIIWLGDLNY 385 (535)
Q Consensus 308 GNKGaVsvs~~i~~ts~cFVn~HLaAge~e~d~~rRN~D~~eIlr~~~F~~~~~~~~~~~p~~I~dhD~ifw~GDLNY 385 (535)
...+.+.+.+ ..+.++|+||.++... +..++-+.+..+.+.+. ........+|++||||.
T Consensus 118 ~~r~~~~~~~----~~~~v~n~Hl~~~~~~-~~~~~~~~~~~~~~~~~-------------~~~~~~~~~iv~GDfN~ 177 (250)
T d2f1na1 118 GGRPLLGIRI----GNDAFFTAHAIAMRNN-DAPALVEEVYNFFRDSR-------------DPVHQALNWMILGDFNR 177 (250)
T ss_dssp TCCCEEEEEE----TTEEEEEEECCSSSSC-SHHHHHHHHHHHHHTCS-------------SHHHHTCEEEEEEECSS
T ss_pred cccceeeEee----ceEEEEEEEcCCCCch-hHHHHHHHHHHHHHHHH-------------hhhccCCceEEecccCc
Confidence 3445555543 3578999999988643 44455555555554321 01112356999999995
No 10
>d1hd7a_ d.151.1.1 (A:) DNA repair endonuclease Hap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.87 E-value=0.12 Score=46.04 Aligned_cols=34 Identities=26% Similarity=0.488 Sum_probs=21.4
Q ss_pred eEEEEecccCCC-CCCCCCCchhhcCCCCCCcEEEEc
Q 039092 91 RIFVATWNVAGK-SPPSYLNLEDWLQTSPPADIYVLG 126 (535)
Q Consensus 91 rifvgTWNVgG~-~P~~~Ldl~dwL~~~~~aDIYVlG 126 (535)
.|=|.||||.|. +... -.+-+||... .|||..|=
T Consensus 18 ~mki~S~NvnGlr~~~~-~~~~~~i~~~-~pDIi~LQ 52 (275)
T d1hd7a_ 18 TLKICSWNVDGLRAWIK-KKGLDWVKEE-APDILCLQ 52 (275)
T ss_dssp CEEEEEEECSSHHHHHH-TTHHHHHHHH-CCSEEEEE
T ss_pred cEEEEEEEeccHHhhhh-ccHHHHHHhC-CCCEEEEE
Confidence 466899999882 2111 1244787664 47998883
No 11
>d1akoa_ d.151.1.1 (A:) DNA-repair enzyme exonuclease III {Escherichia coli [TaxId: 562]}
Probab=78.78 E-value=0.35 Score=41.18 Aligned_cols=34 Identities=24% Similarity=0.207 Sum_probs=21.8
Q ss_pred ccceeeecC---Cceeeeeec---cccccCCCcCccceEE
Q 039092 462 CDRILWYGR---GLHQLSYVR---GESRFSDHRPVYSIFL 495 (535)
Q Consensus 462 CDRILw~g~---~i~qlsY~~---~e~~~SDHrPV~A~F~ 495 (535)
.|.||.... .+....+.. .....|||.||.|.|.
T Consensus 228 IDyI~~s~~l~~~~~~~~i~~~~~~~~~~SDH~PV~a~~~ 267 (268)
T d1akoa_ 228 IDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFR 267 (268)
T ss_dssp CEEEEEEHHHHTTEEEEEECHHHHTSSSCCSBCCEEEEEC
T ss_pred EEEEEeChHHhhhheEEEEeccccCCCCCCCcccEEEEEE
Confidence 799998643 122222222 3456799999999883
No 12
>d1sr4b_ d.151.1.1 (B:) Cytolethal distending toxin subunit B {Haemophilus ducreyi [TaxId: 730]}
Probab=50.93 E-value=2.6 Score=36.02 Aligned_cols=32 Identities=38% Similarity=0.610 Sum_probs=18.8
Q ss_pred EEecccCCCCCCCC----CCchhhcCCCCCCcEEEE
Q 039092 94 VATWNVAGKSPPSY----LNLEDWLQTSPPADIYVL 125 (535)
Q Consensus 94 vgTWNVgG~~P~~~----Ldl~dwL~~~~~aDIYVl 125 (535)
|+||||.|-..+.+ .++...+-....|||..|
T Consensus 7 v~TwNi~~~~~~~~~~~~~~~~~~~~~~~~~DIi~L 42 (261)
T d1sr4b_ 7 VATWNLQGSSAVNESKWNINVRQLLSGEQGADILMV 42 (261)
T ss_dssp EEEEECCCCSSSSHHHHHHHHHHHHCSTTCCSEEEE
T ss_pred EEEEeCCcCCCCccccccHHHHHHHHhcCCCCEEEE
Confidence 89999987655433 122333434456777666
No 13
>d2f1na1 d.151.1.1 (A:1-250) Cytolethal distending toxin subunit B {Escherichia coli [TaxId: 562]}
Probab=33.62 E-value=6.2 Score=33.93 Aligned_cols=32 Identities=31% Similarity=0.591 Sum_probs=17.3
Q ss_pred EEecccCCCCCCCC----CCchhhcCCCCCCcEEEE
Q 039092 94 VATWNVAGKSPPSY----LNLEDWLQTSPPADIYVL 125 (535)
Q Consensus 94 vgTWNVgG~~P~~~----Ldl~dwL~~~~~aDIYVl 125 (535)
|.||||-|...+.. ..+...+.....|||..|
T Consensus 7 v~TwNi~~~~~~~~~~~~~~~~~~~~~~~~~DVl~l 42 (250)
T d2f1na1 7 VATWNLQGASATTESKWNINVRQLISGENAVDILAV 42 (250)
T ss_dssp EEEEEEEECTTSCHHHHHTHHHHHHSSTTCCSEEEE
T ss_pred EEEEeCCCCcCcccccchHHHHHHHHhcCCCCEEEE
Confidence 68999966443321 223334444455666655
No 14
>d1hd7a_ d.151.1.1 (A:) DNA repair endonuclease Hap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.60 E-value=2.5 Score=36.99 Aligned_cols=34 Identities=24% Similarity=0.123 Sum_probs=20.2
Q ss_pred ccceeeecCCc-eeeeee-ccccccCCCcCccceEE
Q 039092 462 CDRILWYGRGL-HQLSYV-RGESRFSDHRPVYSIFL 495 (535)
Q Consensus 462 CDRILw~g~~i-~qlsY~-~~e~~~SDHrPV~A~F~ 495 (535)
.|.||-...-. ....+. ......|||.||.+.+.
T Consensus 239 IDyi~vs~~l~~~v~~~~i~~~~~~SDH~PV~v~l~ 274 (275)
T d1hd7a_ 239 LDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLA 274 (275)
T ss_dssp CEEEEECGGGGGGEEEEEECTTCCSSSBCCEEEEEC
T ss_pred eEEEEeChHHhhheeEEEECCCCCCCCcccEEEEEE
Confidence 68898654311 111221 23456799999988764
Done!