Your job contains 1 sequence.
>039096
WRATRTSITLRGNACNLNIVPLCFDAVTNLQLSNISPWGHSLLFSPSSSSMDPRLLADLL
QMSFLCFGAEFVPLLKHCKCLTSVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSF
SEDYRPQEIIEIIAARPNLNKWAVSIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTAED
ARISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLES
LSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCE
NLGAVASCKALKPIRDRIQKLHIDCVWDGIRSSEAKATGNTSTIFSKTRWKSLKELSFWI
EVGELLTPLPVAGLDECPILENIRIKMEGDTREKPLLRDDKAWGLSCLTRYPRLSKLVLD
FGDTDGHNQAAPYKAADLSTWDRFVLNGIGNLILKELDYWPAKDPNASQRSLSRLAAALI
SNCITLRKVFVHCTAREHFMSMLISPTPNPKKARDAQIKLDYYPPPDADDSSTEIRIGSH
HRFEDAINARPTPD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039096
(554 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2041499 - symbol:MAX2 "AT2G42620" species:3702... 468 6.6e-93 3
UNIPROTKB|Q5VMP0 - symbol:D3 "F-box/LRR-repeat MAX2 homol... 368 3.3e-70 3
TAIR|locus:2143320 - symbol:AT5G27920 "AT5G27920" species... 132 3.6e-05 1
TAIR|locus:2166978 - symbol:AT5G23340 species:3702 "Arabi... 123 0.00017 1
TAIR|locus:2040105 - symbol:EBF1 "AT2G25490" species:3702... 124 0.00026 1
TAIR|locus:2124372 - symbol:VFB3 "AT4G07400" species:3702... 121 0.00046 1
>TAIR|locus:2041499 [details] [associations]
symbol:MAX2 "AT2G42620" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0007568 "aging" evidence=IMP] [GO:0009934 "regulation of
meristem structural organization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=TAS] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=ISS] [GO:0009414 "response to water
deprivation" evidence=IGI] [GO:0009926 "auxin polar transport"
evidence=IMP] [GO:0010016 "shoot system morphogenesis"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IMP] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010050 "vegetative phase change" evidence=RCA]
PROSITE:PS50181 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009734 GO:GO:0009926 GO:GO:0009414
GO:GO:0016567 GO:GO:0009416 GO:GO:0019005 GO:GO:0009934
EMBL:AC007087 GO:GO:0010016 eggNOG:NOG311391 HOGENOM:HOG000030535
OMA:MDLSLWE EMBL:AF305597 IPI:IPI00543819 PIR:B84856
RefSeq:NP_565979.1 UniGene:At.21231 ProteinModelPortal:Q9SIM9
SMR:Q9SIM9 STRING:Q9SIM9 PaxDb:Q9SIM9 PRIDE:Q9SIM9
EnsemblPlants:AT2G42620.1 GeneID:818862 KEGG:ath:AT2G42620
GeneFarm:2277 TAIR:At2g42620 InParanoid:Q9SIM9 PhylomeDB:Q9SIM9
ProtClustDB:CLSN2688892 Genevestigator:Q9SIM9 Uniprot:Q9SIM9
Length = 693
Score = 468 (169.8 bits), Expect = 6.6e-93, Sum P(3) = 6.6e-93
Identities = 101/215 (46%), Positives = 130/215 (60%)
Query: 337 ATGNTSTIFSKTR-WKSLKELSFWIEVGELLTPLPVAGLDECPILENIRIKMEGDTREKP 395
+T + + S+ R W+ L+ LS WI VGE LTPLP+ GLD+CP LE IRIK+EGD R K
Sbjct: 481 STSDVNGFCSEDRVWEKLEYLSLWINVGEFLTPLPMTGLDDCPNLEEIRIKIEGDCRGKR 540
Query: 396 LLRDDKAWGLSCLTRYPRLSKLVLDFGDTDGHNQAAPYKAADLSTWDRFVLNGIGNLILK 455
+ + +GLSCL YP+LSK+ LD GDT G AP DLS W+RF L GIG+L L
Sbjct: 541 RPAEPE-FGLSCLALYPKLSKMQLDCGDTIGFALTAPPMQMDLSLWERFFLTGIGSLSLS 599
Query: 456 ELDYWPAKDPNXXXXXXXXXXXXXXXNCITLRKVFVHCTAREHFMSMLISPTPNPKKARD 515
ELDYWP +D + C+TLRK+F+H TA EHFM+ L+ PN RD
Sbjct: 600 ELDYWPPQDRDVNQRSLSLPGAGLLQECLTLRKLFIHGTAHEHFMNFLLR-IPN---LRD 655
Query: 516 AQIKLXXXXXXXXXXSSTEIRIGSHHRFEDAINAR 550
Q++ STE+R+GS RFED +N+R
Sbjct: 656 VQLR-ADYYPAPENDMSTEMRVGSCSRFEDQLNSR 689
Score = 370 (135.3 bits), Expect = 6.6e-93, Sum P(3) = 6.6e-93
Identities = 91/212 (42%), Positives = 127/212 (59%)
Query: 145 SIATNCPRLTLLHLAETSTLAAMRGDPDDD-GFTAEDARISEEGLIQLFSGLPLLEELAL 203
++AT+ P+LTLLH+ +T++LA R P + G +A A E L + L+ ++
Sbjct: 242 AVATSSPKLTLLHMVDTASLANPRAIPGTEAGDSAVTAGTLIEVFSGLPNLEELVLDVGK 301
Query: 204 DV---GKNVRDSGSASEALKS-KCVNLKGL-------KLG--QLHSWLESLSIKNCGDLS 250
DV G + S + L+ K +G+ +L L L+SLSIKN GDL+
Sbjct: 302 DVKHSGVALEALNSKCKKLRVLKLGQFQGVCSATEWRRLDGVALCGGLQSLSIKNSGDLT 361
Query: 251 DMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKA 310
DM LVAIGRGC KL FE++GC+N+TVDGLRT+ SL +TL ++I CC+NL AS KA
Sbjct: 362 DMGLVAIGRGCCKLTTFEIQGCENVTVDGLRTMVSLRSKTLTDVRISCCKNLDTAASLKA 421
Query: 311 LKPIRDRIQKLHIDCVWDGIRSSEAKATGNTS 342
++PI DRI++LHIDCVW G E + TS
Sbjct: 422 IEPICDRIKRLHIDCVWSGSEDEEVEGRVETS 453
Score = 350 (128.3 bits), Expect = 4.6e-79, Sum P(2) = 4.6e-79
Identities = 112/321 (34%), Positives = 160/321 (49%)
Query: 23 CFDAVTNLQLSNISPWGHXXXXXXXXXXMDPRLLADLLQMSFLCFGAEFVPLLKHCK-CL 81
CF V +L + SP +LL + S + G +FVP+ +HC L
Sbjct: 101 CFPFVESLNVYTRSPSSLELLLPQWPRIRHIKLLRWHQRASQIPTGGDFVPIFEHCGGFL 160
Query: 82 TSVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSFSEDYRPQEIIEIIAARPNLNK 141
S+DLS+FYHWTEDLPPVL Y D +A LT L+LL SF+E Y+ EI+ I + PNL
Sbjct: 161 ESLDLSNFYHWTEDLPPVLLRYADVAARLTRLDLLTASFTEGYKSSEIVSITKSCPNLKT 220
Query: 142 WAVSIATNCPRL-------TLLHLAETS---TL------AAMRGDPDDDGFTAEDARISE 185
+ V+ T PR TL +A +S TL A++ G A D+ ++
Sbjct: 221 FRVA-CTFDPRYFEFVGDETLSAVATSSPKLTLLHMVDTASLANPRAIPGTEAGDSAVTA 279
Query: 186 EGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKN 245
LI++FSGLP LEEL LDVGK+V+ SG A EAL SKC L+ LKLGQ + +
Sbjct: 280 GTLIEVFSGLPNLEELVLDVGKDVKHSGVALEALNSKCKKLRVLKLGQFQGVCSATEWRR 339
Query: 246 CGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAV 305
L ++L C L ++ ++T GL + + L +I CEN+ V
Sbjct: 340 ---LDGVAL------CGGLQSLSIKNSGDLTDMGLVAIGRGCCK-LTTFEIQGCENV-TV 388
Query: 306 ASCKALKPIRDR-IQKLHIDC 325
+ + +R + + + I C
Sbjct: 389 DGLRTMVSLRSKTLTDVRISC 409
Score = 127 (49.8 bits), Expect = 6.6e-93, Sum P(3) = 6.6e-93
Identities = 33/86 (38%), Positives = 53/86 (61%)
Query: 2 RATRTSITLRGNACNLNIVPLCFDAVTNLQLSNISPWGHXXXXXXXXXXMDPRLLADLLQ 61
R+TR+ +T+RGNA +L++VP CF ++++L LS +SPWGH + LLA L+
Sbjct: 42 RSTRSHLTIRGNARDLSLVPDCFRSISHLDLSFLSPWGHTLLASLPIDHQN--LLA--LR 97
Query: 62 MSFLCFGAEFVPLLK-HCKCLTSVDL 86
+ F CF FV L + + +S++L
Sbjct: 98 LKF-CF--PFVESLNVYTRSPSSLEL 120
Score = 39 (18.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 412 PRLSKLVLDFGDTDGHNQAA 431
P L +LVLD G H+ A
Sbjct: 290 PNLEELVLDVGKDVKHSGVA 309
>UNIPROTKB|Q5VMP0 [details] [associations]
symbol:D3 "F-box/LRR-repeat MAX2 homolog" species:39947
"Oryza sativa Japonica Group" [GO:0007275 "multicellular organismal
development" evidence=IMP] InterPro:IPR001810 PROSITE:PS50181
GO:GO:0007275 GO:GO:0005634 GO:GO:0009926 GO:GO:0007568
GO:GO:0009414 SUPFAM:SSF81383 GO:GO:0009416 GO:GO:0000151
GO:GO:0009934 GO:GO:0010016 EMBL:AP006533 EMBL:AK065478
RefSeq:NP_001174608.1 UniGene:Os.18946 ProteinModelPortal:Q5VMP0
EnsemblPlants:LOC_Os06g06050.1 GeneID:9272469
KEGG:dosa:Os06t0154200-01 KEGG:osa:9272469 Gramene:Q5VMP0
eggNOG:NOG311391 HOGENOM:HOG000030535 OMA:MDLSLWE Uniprot:Q5VMP0
Length = 720
Score = 368 (134.6 bits), Expect = 3.3e-70, Sum P(3) = 3.3e-70
Identities = 83/206 (40%), Positives = 110/206 (53%)
Query: 350 WKSLKELSFWIEVGELLTPLPVAGLDECPILENIRIKMEGDTREKPLLRDDKAWGLSCLT 409
W+ L+ LS W G+LL+PL AGLD CP+LE I IK+EGD R P +GLS L
Sbjct: 519 WEMLRSLSLWFSAGQLLSPLISAGLDSCPVLEEISIKVEGDCRTCPRPAPRTIFGLSDLA 578
Query: 410 RYPRLSKLVLDFGDTDGHNQAAPYKAADLSTWDRFVLNGIGNL-ILKELDYWPAKDPNXX 468
+P L+K+ LD + G+ AP DLS W+RF L+GI +L L ELDYWP +D +
Sbjct: 579 GFPVLAKMKLDLSEAVGYALTAPTGQMDLSLWERFYLHGIESLQTLYELDYWPPQDKDVH 638
Query: 469 XXXXXXXXXXXXXNCITLRKVFVHCTAREHFMSMLISPTPNPKKARDAQIKLXXXXXXXX 528
C+ LRK+F+H T EHFM+ +S PN RD Q++
Sbjct: 639 HRSLTLPAVGLIQRCVGLRKLFIHGTTHEHFMTFFLS-IPN---LRDMQLREDYYPAPEN 694
Query: 529 XXSSTEIRIGSHHRFEDAINARPTPD 554
TE+R S RFE +N+R D
Sbjct: 695 DLMFTEMRAESWLRFEVQLNSRQIDD 720
Score = 358 (131.1 bits), Expect = 3.3e-70, Sum P(3) = 3.3e-70
Identities = 87/215 (40%), Positives = 116/215 (53%)
Query: 144 VSIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARISEEGLIQLFSGLPLLEELAL 203
+S+AT+CPRLT+L L+E AA E+A I+ GL+ F+ LP LE+ +
Sbjct: 282 LSLATSCPRLTVLRLSEPFEAAA--------NIQREEAAITVAGLVAFFAALPALEDFTM 333
Query: 204 DVGKNVRDSGSASEALKSKCVNLKGLKLGQLH-----SWL-----------ESLSIKNCG 247
D+ NV ++ A EAL +C +K L LG SWL ESL +KNC
Sbjct: 334 DLQHNVLEAAPAMEALARRCPRIKFLTLGSFQGLCKASWLHLDGVAVCGGLESLYMKNCQ 393
Query: 248 DLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVAS 307
DL+D SL AIGRGC +L KF + GC +T G+R LA LR TL + + C L
Sbjct: 394 DLTDASLAAIGRGCRRLAKFGIHGCDLVTSAGIRRLAFTLRPTLKEVTVLHCRLLHTAEC 453
Query: 308 CKALKPIRDRIQKLHIDCVWDGIRSSEAKATGNTS 342
AL PIRDRI+ L I+CVW+ + A G T+
Sbjct: 454 LTALSPIRDRIESLEINCVWNTTEQPCSVANGTTT 488
Score = 250 (93.1 bits), Expect = 6.7e-59, Sum P(3) = 6.7e-59
Identities = 73/233 (31%), Positives = 111/233 (47%)
Query: 68 GAEFVPLLKHCKCLTSVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSFSEDYRPQ 127
GA+ PLL+ C L +DLS FY WTED+ L +P +A LT L+L + ++ ++
Sbjct: 188 GADLEPLLETCAALRELDLSEFYCWTEDVVRALTTHPSATAALTHLDLGLAAATDGFKSS 247
Query: 128 EIIEIIAARPNLNKWAVSIATNCPRLT-------LLHLAETST-LAAMR-GDPDDDG--F 176
E+ I A+ PNL K N PR + LL LA + L +R +P +
Sbjct: 248 ELGPIAASCPNLRKLVAPCLFN-PRFSDCVGDDALLSLATSCPRLTVLRLSEPFEAAANI 306
Query: 177 TAEDARISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLH- 235
E+A I+ GL+ F+ LP LE+ +D+ NV ++ A EAL +C +K L LG
Sbjct: 307 QREEAAITVAGLVAFFAALPALEDFTMDLQHNVLEAAPAMEALARRCPRIKFLTLGSFQG 366
Query: 236 ----SWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEV----EGCKNITVDGL 280
SWL + CG L + + + C L + GC+ + G+
Sbjct: 367 LCKASWLHLDGVAVCGGLESLYM----KNCQDLTDASLAAIGRGCRRLAKFGI 415
Score = 76 (31.8 bits), Expect = 3.3e-70, Sum P(3) = 3.3e-70
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 2 RATRTSITLRGNACNLNIVPLC----FDAVTNLQLSNISPWGH 40
RATR+ ++LRG+ + + L F A+ +L LS +SPWGH
Sbjct: 53 RATRSELSLRGDPRSPGFLFLSHAFRFPALEHLDLSLVSPWGH 95
Score = 46 (21.3 bits), Expect = 8.0e-33, Sum P(2) = 8.0e-33
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 147 ATNCPRLTLLHLAETSTLAAMRGDPDDDGF 176
A C R+ A S L+ +RGDP GF
Sbjct: 42 ALACGRMRAAERATRSELS-LRGDPRSPGF 70
>TAIR|locus:2143320 [details] [associations]
symbol:AT5G27920 "AT5G27920" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0009407 "toxin catabolic
process" evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR
InterPro:IPR006553 SMART:SM00367 KO:K10268 HOGENOM:HOG000244114
EMBL:BT005940 EMBL:AK117239 IPI:IPI00538711 RefSeq:NP_568502.1
UniGene:At.30778 ProteinModelPortal:Q8GZ31 SMR:Q8GZ31
EnsemblPlants:AT5G27920.1 GeneID:832858 KEGG:ath:AT5G27920
TAIR:At5g27920 InParanoid:Q8GZ31 OMA:GFWALAY PhylomeDB:Q8GZ31
ProtClustDB:CLSN2689880 Genevestigator:Q8GZ31 Uniprot:Q8GZ31
Length = 642
Score = 132 (51.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 68/238 (28%), Positives = 106/238 (44%)
Query: 72 VPLLKHCKCLTSVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSFSEDYRPQEIIE 131
+ LLK C++ V SF + + L + + D A ++ +L+ S S R ++E
Sbjct: 276 IQLLKASHCVSEVS-GSFLKYIKGLKHLKTIWID-GAHVSDSSLV--SLSSSCR--SLME 329
Query: 132 IIAAR--PNLNKWAVSIATNCPRLTLLHLA------ETSTLAAMRGDPDDDGFTAEDAR- 182
I +R + +S+A NC L L+LA + + A + + E
Sbjct: 330 IGLSRCVDVTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKLESCHL 389
Query: 183 ISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLS 242
I+E+GL L L++EL L V D G E + SKC NL+ LKLG
Sbjct: 390 ITEKGLQSLGCYSMLVQELDLTDCYGVNDRGL--EYI-SKCSNLQRLKLGL--------- 437
Query: 243 IKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCE 300
C ++SD + IG CSKL++ ++ C DGL L+ + +I YCCE
Sbjct: 438 ---CTNISDKGIFHIGSKCSKLLELDLYRCAGFGDDGLAALSRGCKSLNRLILSYCCE 492
Score = 121 (47.7 bits), Expect = 0.00056, P = 0.00056
Identities = 65/257 (25%), Positives = 116/257 (45%)
Query: 74 LLKHCKCLTSVDLSSFYHWTEDLPPV-LKAYPDKSAILTC--LNLLKTSFSEDYRP--QE 128
L K CK L S+D+S + + + L + +++C ++ F E+ P QE
Sbjct: 193 LCKICKGLKSLDVSYLKITNDSIRSIALLVKLEVLDMVSCPLIDDGGLQFLENGSPSLQE 252
Query: 129 IIEIIAARPNLNKWAVSIATNCPRLTLL---H-LAETST--LAAMRGDPDDDGFTAEDAR 182
+ R +L+ +SI P + LL H ++E S L ++G + A
Sbjct: 253 VDVTRCDRVSLSG-LISIVRGHPDIQLLKASHCVSEVSGSFLKYIKGLKHLKTIWIDGAH 311
Query: 183 ISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLS 242
+S+ L+ L S L E+ L +V D G S L C+NLK +L+
Sbjct: 312 VSDSSLVSLSSSCRSLMEIGLSRCVDVTDIGMIS--LARNCLNLK------------TLN 357
Query: 243 IKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLA--SLLRETLVVIKIYCCE 300
+ CG ++D+++ A+ + C L ++E C IT GL++L S+L + L + Y
Sbjct: 358 LACCGFVTDVAISAVAQSCRNLGTLKLESCHLITEKGLQSLGCYSMLVQELDLTDCYGVN 417
Query: 301 NLGA--VASCKALKPIR 315
+ G ++ C L+ ++
Sbjct: 418 DRGLEYISKCSNLQRLK 434
>TAIR|locus:2166978 [details] [associations]
symbol:AT5G23340 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR InterPro:IPR006553 SMART:SM00367
EMBL:AB007648 eggNOG:NOG300245 KO:K10268 EMBL:AY054268
EMBL:AY133522 EMBL:AK226277 IPI:IPI00524374 RefSeq:NP_197725.1
UniGene:At.21636 UniGene:At.71067 ProteinModelPortal:Q9FMW7
SMR:Q9FMW7 IntAct:Q9FMW7 STRING:Q9FMW7 PaxDb:Q9FMW7 PRIDE:Q9FMW7
EnsemblPlants:AT5G23340.1 GeneID:832398 KEGG:ath:AT5G23340
TAIR:At5g23340 HOGENOM:HOG000030079 InParanoid:Q9FMW7 OMA:DSCEQAG
PhylomeDB:Q9FMW7 ProtClustDB:CLSN2686136 Genevestigator:Q9FMW7
Uniprot:Q9FMW7
Length = 405
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 80/303 (26%), Positives = 129/303 (42%)
Query: 183 ISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLS 242
+++ L + G L L L K + D+G AS +C++L L+ L
Sbjct: 85 VTDSDLAVISEGFKFLRVLNLHNCKGITDTGLASIG---RCLSL-----------LQFLD 130
Query: 243 IKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENL 302
+ C LSD L A+ GC L + GC+ IT + L++L+ R+ L + + C N+
Sbjct: 131 VSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRD-LEALGLQGCTNI 189
Query: 303 GAVASCKALKPIRDRIQKLHID-C--VWDGIRSSEAKATGNT-STIFSKTRWKSLKE-LS 357
+K R +I+ L I+ C V D SS AKA ++ T+ +K E +S
Sbjct: 190 TDSGLADLVKGCR-KIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLLDCYKVGNESIS 248
Query: 358 FWIEVGELLTPLPVAGLDECPILENIRIKMEGDTREKPL--LRDDKAW-------GLSCL 408
+ + L L + G C + + I + D+ + L LR D W LSC+
Sbjct: 249 SLAQFCKNLETLIIGG---CRDISDESIMLLADSCKDSLKNLRMD--WCLNISDSSLSCI 303
Query: 409 TRYPRLSKLVLDFG------DT---D-GHNQAAPYKAADLSTWDRFVLNGIGNLILK--E 456
+ + + LD G DT D G + K +S + + GIG L+ K
Sbjct: 304 LKQCKNLE-ALDIGCCEEVTDTAFRDLGSDDVLGLKVLKVSNCTKITVTGIGKLLDKCSS 362
Query: 457 LDY 459
L+Y
Sbjct: 363 LEY 365
>TAIR|locus:2040105 [details] [associations]
symbol:EBF1 "AT2G25490" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009723 "response to ethylene stimulus" evidence=IMP]
[GO:0010105 "negative regulation of ethylene mediated signaling
pathway" evidence=TAS] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009873 GO:GO:0009723
SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0006511 GO:GO:0010105
InterPro:IPR006553 SMART:SM00367 EMBL:AC006300 EMBL:AJ609238
EMBL:AY072205 EMBL:AY091333 EMBL:AK317560 EMBL:AK229995
IPI:IPI00530647 PIR:A84649 RefSeq:NP_565597.1 UniGene:At.24288
UniGene:At.67740 ProteinModelPortal:Q9SKK0 SMR:Q9SKK0 IntAct:Q9SKK0
STRING:Q9SKK0 PRIDE:Q9SKK0 EnsemblPlants:AT2G25490.1 GeneID:817087
KEGG:ath:AT2G25490 TAIR:At2g25490 eggNOG:NOG300245
HOGENOM:HOG000238885 InParanoid:Q9SKK0 KO:K14515 OMA:KCAISDS
PhylomeDB:Q9SKK0 ProtClustDB:CLSN2686700 Genevestigator:Q9SKK0
Uniprot:Q9SKK0
Length = 628
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 43/134 (32%), Positives = 62/134 (46%)
Query: 183 ISEEGLIQLFSGLPLLEELALDVGKNVRDSG------SASEALKS----KCVNLKGLKLG 232
+S+ GL+ LE L L+ V G + E LK+ C++++ L G
Sbjct: 374 LSDNGLVSFAKASLSLESLQLEECHRVTQFGFFGSLLNCGEKLKAFSLVNCLSIRDLTTG 433
Query: 233 ---QLH-SWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLR 288
H S L SLSI+NC D +L AIG+ C +L ++ G K IT G L++
Sbjct: 434 LPASSHCSALRSLSIRNCPGFGDANLAAIGKLCPQLEDIDLCGLKGITESGF---LHLIQ 490
Query: 289 ETLVVIKIYCCENL 302
+LV I C NL
Sbjct: 491 SSLVKINFSGCSNL 504
>TAIR|locus:2124372 [details] [associations]
symbol:VFB3 "AT4G07400" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0004842
HOGENOM:HOG000240905 ProtClustDB:CLSN2681910 EMBL:AF147262
EMBL:AL161505 IPI:IPI00546292 PIR:B85072 RefSeq:NP_567316.1
UniGene:At.66608 ProteinModelPortal:Q9S9X4 SMR:Q9S9X4
EnsemblPlants:AT4G07400.1 GeneID:826171 KEGG:ath:AT4G07400
TAIR:At4g07400 eggNOG:NOG300731 InParanoid:Q9S9X4 OMA:SNLPDEC
PhylomeDB:Q9S9X4 Genevestigator:Q9S9X4 Uniprot:Q9S9X4
Length = 554
Score = 121 (47.7 bits), Expect = 0.00046, P = 0.00046
Identities = 65/250 (26%), Positives = 103/250 (41%)
Query: 68 GAEFVPLLKHCKCLTSVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSFSE----- 122
G F PLL K L + + + + D V +A DK + ++L + S+
Sbjct: 255 GQCFAPLLSGAKGLRILKI---FRCSGDWDRVFEAVRDKVNAIVEIHLERIQMSDLGLTA 311
Query: 123 --DYRPQEIIEIIAARPNLNKWAVSIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTAED 180
E++ ++ N +A C L LH+ DG+
Sbjct: 312 LSKCSGVEVLHLVKTPDCTNVGLALVAERCKLLRKLHI---------------DGWKTN- 355
Query: 181 ARISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKL------GQL 234
RI +EGLI + L+EL L +G N + + EA+ S C+NL+ L L G
Sbjct: 356 -RIGDEGLIVVAKYCWNLQELVL-IGVN--PTKLSLEAIVSNCLNLERLALCGSDTVGDT 411
Query: 235 HSW--------LESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASL 286
L L IKNC ++D + A+G GC L+K +V+ C+ +T G L
Sbjct: 412 ELCCIAEKCLALRKLCIKNC-PITDDGIKALGNGCPNLLKVKVKKCRGVTTQGADLLRK- 469
Query: 287 LRETLVVIKI 296
R L+V+ +
Sbjct: 470 -RRALLVVNL 478
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 554 519 0.00089 119 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 629 (67 KB)
Total size of DFA: 318 KB (2161 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.78u 0.16s 38.94t Elapsed: 00:00:04
Total cpu time: 38.79u 0.16s 38.95t Elapsed: 00:00:04
Start: Fri May 10 08:50:41 2013 End: Fri May 10 08:50:45 2013