BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039096
(554 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SIM9|ORE9_ARATH F-box protein ORE9 OS=Arabidopsis thaliana GN=ORE9 PE=1 SV=2
Length = 693
Score = 504 bits (1299), Expect = e-142, Method: Compositional matrix adjust.
Identities = 300/661 (45%), Positives = 397/661 (60%), Gaps = 117/661 (17%)
Query: 2 RATRTSITLRGNACNLNIVPLCFDAVTNLQLSNISPWGHSLL------------------ 43
R+TR+ +T+RGNA +L++VP CF ++++L LS +SPWGH+LL
Sbjct: 42 RSTRSHLTIRGNARDLSLVPDCFRSISHLDLSFLSPWGHTLLASLPIDHQNLLALRLKFC 101
Query: 44 ---------FSPSSSSMD------PR-----LLADLLQMSFLCFGAEFVPLLKHCK-CLT 82
++ S SS++ PR LL + S + G +FVP+ +HC L
Sbjct: 102 FPFVESLNVYTRSPSSLELLLPQWPRIRHIKLLRWHQRASQIPTGGDFVPIFEHCGGFLE 161
Query: 83 SVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSFSEDYRPQEIIEIIAARPNLNKW 142
S+DLS+FYHWTEDLPPVL Y D +A LT L+LL SF+E Y+ EI+ I + PNL +
Sbjct: 162 SLDLSNFYHWTEDLPPVLLRYADVAARLTRLDLLTASFTEGYKSSEIVSITKSCPNLKTF 221
Query: 143 AVS------------------IATNCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARIS 184
V+ +AT+ P+LTLLH+ +T++LA R P G A D+ ++
Sbjct: 222 RVACTFDPRYFEFVGDETLSAVATSSPKLTLLHMVDTASLANPRAIP---GTEAGDSAVT 278
Query: 185 EEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHS------W- 237
LI++FSGLP LEEL LDVGK+V+ SG A EAL SKC L+ LKLGQ W
Sbjct: 279 AGTLIEVFSGLPNLEELVLDVGKDVKHSGVALEALNSKCKKLRVLKLGQFQGVCSATEWR 338
Query: 238 ----------LESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLL 287
L+SLSIKN GDL+DM LVAIGRGC KL FE++GC+N+TVDGLRT+ SL
Sbjct: 339 RLDGVALCGGLQSLSIKNSGDLTDMGLVAIGRGCCKLTTFEIQGCENVTVDGLRTMVSLR 398
Query: 288 RETLVVIKIYCCENLGAVASCKALKPIRDRIQKLHIDCVWDG---------IRSSEAK-- 336
+TL ++I CC+NL AS KA++PI DRI++LHIDCVW G + +SEA
Sbjct: 399 SKTLTDVRISCCKNLDTAASLKAIEPICDRIKRLHIDCVWSGSEDEEVEGRVETSEADHE 458
Query: 337 ----------------------ATGNTSTIFSKTR-WKSLKELSFWIEVGELLTPLPVAG 373
+T + + S+ R W+ L+ LS WI VGE LTPLP+ G
Sbjct: 459 EEDDGYERSQKRCKYSFEEEHCSTSDVNGFCSEDRVWEKLEYLSLWINVGEFLTPLPMTG 518
Query: 374 LDECPILENIRIKMEGDTREKPLLRDDKAWGLSCLTRYPRLSKLVLDFGDTDGHNQAAPY 433
LD+CP LE IRIK+EGD R K + + +GLSCL YP+LSK+ LD GDT G AP
Sbjct: 519 LDDCPNLEEIRIKIEGDCRGKRRPAEPE-FGLSCLALYPKLSKMQLDCGDTIGFALTAPP 577
Query: 434 KAADLSTWDRFVLNGIGNLILKELDYWPAKDPNASQRSLSRLAAALISNCITLRKVFVHC 493
DLS W+RF L GIG+L L ELDYWP +D + +QRSLS A L+ C+TLRK+F+H
Sbjct: 578 MQMDLSLWERFFLTGIGSLSLSELDYWPPQDRDVNQRSLSLPGAGLLQECLTLRKLFIHG 637
Query: 494 TAREHFMSMLISPTPNPKKARDAQIKLDYYPPPDADDSSTEIRIGSHHRFEDAINARPTP 553
TA EHFM+ L+ PN RD Q++ DYYP P+ +D STE+R+GS RFED +N+R
Sbjct: 638 TAHEHFMNFLLR-IPN---LRDVQLRADYYPAPE-NDMSTEMRVGSCSRFEDQLNSRNII 692
Query: 554 D 554
D
Sbjct: 693 D 693
>sp|Q5VMP0|MAX2_ORYSJ F-box/LRR-repeat MAX2 homolog OS=Oryza sativa subsp. japonica GN=D3
PE=2 SV=2
Length = 720
Score = 348 bits (894), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 229/600 (38%), Positives = 306/600 (51%), Gaps = 89/600 (14%)
Query: 23 CFDAVTNL--------QLSNISP-WGHSLL-FSPSSSSMDPRLLADLLQMSFLCFGAEFV 72
CF AVT+L L+N++P W SL P L D GA+
Sbjct: 142 CFPAVTSLAVYCRDPTTLANLTPHWQASLRRVKLVRWHQRPPTLPD---------GADLE 192
Query: 73 PLLKHCKCLTSVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSFSEDYRPQEIIEI 132
PLL+ C L +DLS FY WTED+ L +P +A LT L+L + ++ ++ E+ I
Sbjct: 193 PLLETCAALRELDLSEFYCWTEDVVRALTTHPSATAALTHLDLGLAAATDGFKSSELGPI 252
Query: 133 IAARPNLNKWA------------------VSIATNCPRLTLLHLAETSTLAAMRGDPDDD 174
A+ PNL K +S+AT+CPRLT+L L+E AA
Sbjct: 253 AASCPNLRKLVAPCLFNPRFSDCVGDDALLSLATSCPRLTVLRLSEPFEAAA-------- 304
Query: 175 GFTAEDARISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQL 234
E+A I+ GL+ F+ LP LE+ +D+ NV ++ A EAL +C +K L LG
Sbjct: 305 NIQREEAAITVAGLVAFFAALPALEDFTMDLQHNVLEAAPAMEALARRCPRIKFLTLGSF 364
Query: 235 H-----SWL-----------ESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVD 278
SWL ESL +KNC DL+D SL AIGRGC +L KF + GC +T
Sbjct: 365 QGLCKASWLHLDGVAVCGGLESLYMKNCQDLTDASLAAIGRGCRRLAKFGIHGCDLVTSA 424
Query: 279 GLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQKLHIDCVWDGIRSSEAKAT 338
G+R LA LR TL + + C L AL PIRDRI+ L I+CVW+ + A
Sbjct: 425 GIRRLAFTLRPTLKEVTVLHCRLLHTAECLTALSPIRDRIESLEINCVWNTTEQPCSVAN 484
Query: 339 GNTS--------------TIFSKTR---------WKSLKELSFWIEVGELLTPLPVAGLD 375
G T+ + K R W+ L+ LS W G+LL+PL AGLD
Sbjct: 485 GTTTECDPEDDELGEVYESAAKKCRYMEFDDLGSWEMLRSLSLWFSAGQLLSPLISAGLD 544
Query: 376 ECPILENIRIKMEGDTREKPLLRDDKAWGLSCLTRYPRLSKLVLDFGDTDGHNQAAPYKA 435
CP+LE I IK+EGD R P +GLS L +P L+K+ LD + G+ AP
Sbjct: 545 SCPVLEEISIKVEGDCRTCPRPAPRTIFGLSDLAGFPVLAKMKLDLSEAVGYALTAPTGQ 604
Query: 436 ADLSTWDRFVLNGIGNL-ILKELDYWPAKDPNASQRSLSRLAAALISNCITLRKVFVHCT 494
DLS W+RF L+GI +L L ELDYWP +D + RSL+ A LI C+ LRK+F+H T
Sbjct: 605 MDLSLWERFYLHGIESLQTLYELDYWPPQDKDVHHRSLTLPAVGLIQRCVGLRKLFIHGT 664
Query: 495 AREHFMSMLISPTPNPKKARDAQIKLDYYPPPDADDSSTEIRIGSHHRFEDAINARPTPD 554
EHFM+ +S PN RD Q++ DYYP P+ D TE+R S RFE +N+R D
Sbjct: 665 THEHFMTFFLS-IPN---LRDMQLREDYYPAPENDLMFTEMRAESWLRFEVQLNSRQIDD 720
>sp|Q9C5D2|FBL4_ARATH F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2
SV=1
Length = 610
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 126/335 (37%), Gaps = 70/335 (20%)
Query: 71 FVPLLKHCKCLTSVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSFSEDYRPQEII 130
L + C L S+DL Y + L V K L L F E +I
Sbjct: 158 LCSLAQKCTSLKSLDLQGCYVGDQGLAAVGKFCKQ-------LEELNLRFCEGLTDVGVI 210
Query: 131 E-IIAARPNLNKWAVSIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARISEEGLI 189
+ ++ +L V+ + L+L + L + + I ++GLI
Sbjct: 211 DLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEV--------LYLDSEYIHDKGLI 262
Query: 190 QLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNL-------------KGLK-LGQLH 235
+ G L+ L L V + A A+ C +L KG++ +G+
Sbjct: 263 AVAQGCHRLKNLKLQC---VSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGS 319
Query: 236 SWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLA----------- 284
L+ L++ +C +S L AI GC +L + E+ GC NI G+ +
Sbjct: 320 KKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELAL 379
Query: 285 --------SLLRE------TLVVIKIYCCENLGAVASCKALKPIRDRIQKLHIDCVWDGI 330
S L+E +L ++ + C +G +A C K R+ ++KLHI ++
Sbjct: 380 LYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRN-LKKLHIRRCYE-- 436
Query: 331 RSSEAKATGNTSTIFSKTRWKSLKELS--FWIEVG 363
GN I KSL ELS F +VG
Sbjct: 437 -------IGNKGIISIGKHCKSLTELSLRFCDKVG 464
Score = 33.9 bits (76), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 82/216 (37%), Gaps = 42/216 (19%)
Query: 66 CFGAEFVPLLKHCKCLTSVDLSSFYH-WTEDLPPVLKAYP--DKSAILTCLNLLKTSFSE 122
C G E + CK L V+++ ++ T + + K+ P + A+L C + ++ E
Sbjct: 335 CKGLEAIA--HGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQE 392
Query: 123 ---DYRPQEIIEIIAARPNLNKWAVSIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTAE 179
+ EI+ ++ + SIA C L LH+
Sbjct: 393 IGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRC------------------ 434
Query: 180 DARISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLE 239
I +G+I + L EL+L V + A A+ C L+
Sbjct: 435 -YEIGNKGIISIGKHCKSLTELSLRFCDKVGNK--ALIAIGKGC-------------SLQ 478
Query: 240 SLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNI 275
L++ C +SD + AI RGC +L ++ +NI
Sbjct: 479 QLNVSGCNQISDAGITAIARGCPQLTHLDISVLQNI 514
>sp|Q5BJ29|FBXL7_MOUSE F-box/LRR-repeat protein 7 OS=Mus musculus GN=Fbxl7 PE=1 SV=1
Length = 491
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 29/193 (15%)
Query: 113 LNLLKTSFSEDYRPQEIIEIIAARPNLNKWAVSIATNCPRLTLLHLAETSTLA------- 165
L L+ S + + + ++++ PNL VS C ++T + L +++
Sbjct: 214 LRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVS---GCSKVTCISLTREASIKLSPLHGK 270
Query: 166 --AMRGDPDDDGFTAEDARISEEGLIQLFSGLPLLEELALDVGKNVRDSG---------S 214
++R D F ED EGL + + L L L + D G S
Sbjct: 271 QISIRYLDMTDCFVLED-----EGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYCTS 325
Query: 215 ASEALKSKC--VNLKGLK-LGQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEG 271
E S C V+ GL+ + +L S L LSI +CG ++D+ + + + CSKL G
Sbjct: 326 IKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRITDVGIRYVAKYCSKLRYLNARG 385
Query: 272 CKNITVDGLRTLA 284
C+ IT G+ LA
Sbjct: 386 CEGITDHGVEYLA 398
Score = 36.6 bits (83), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 238 LESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASL 286
LE++ + C L+D L I + C +L + EV GC NI+ + + + SL
Sbjct: 188 LETVIVSGCRRLTDRGLYTIAQCCPELRRLEVSGCYNISNEAVFDVVSL 236
Score = 32.7 bits (73), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 14/108 (12%)
Query: 178 AEDARISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSW 237
A RI++ G+ + L L + + D G E L C LK L +G+
Sbjct: 358 AHCGRITDVGIRYVAKYCSKLRYLNARGCEGITDHGV--EYLAKNCTKLKSLDIGK---- 411
Query: 238 LESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLAS 285
C +SD L ++ C L + ++ C++IT GL+ +A+
Sbjct: 412 --------CPLVSDTGLESLALNCFNLKRLSLKSCESITGQGLQIVAA 451
>sp|Q9UJT9|FBXL7_HUMAN F-box/LRR-repeat protein 7 OS=Homo sapiens GN=FBXL7 PE=2 SV=1
Length = 491
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 29/193 (15%)
Query: 113 LNLLKTSFSEDYRPQEIIEIIAARPNLNKWAVSIATNCPRLTLLHLAETSTLA------- 165
L L+ S + + + ++++ PNL VS C ++T + L +++
Sbjct: 214 LRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVS---GCSKVTCISLTREASIKLSPLHGK 270
Query: 166 --AMRGDPDDDGFTAEDARISEEGLIQLFSGLPLLEELALDVGKNVRDSG---------S 214
++R D F ED EGL + + L L L + D G S
Sbjct: 271 QISIRYLDMTDCFVLED-----EGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYCAS 325
Query: 215 ASEALKSKC--VNLKGLK-LGQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEG 271
E S C V+ GL+ + +L S L LSI +CG ++D+ + + + CSKL G
Sbjct: 326 IKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRVTDVGIRYVAKYCSKLRYLNARG 385
Query: 272 CKNITVDGLRTLA 284
C+ IT G+ LA
Sbjct: 386 CEGITDHGVEYLA 398
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 238 LESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASL 286
LE++++ C L+D L I + C +L + EV GC NI+ + + + SL
Sbjct: 188 LETVTVSGCRRLTDRGLYTIAQCCPELRRLEVSGCYNISNEAVFDVVSL 236
>sp|Q9QZH7|FXL20_RAT F-box/LRR-repeat protein 20 OS=Rattus norvegicus GN=Fbxl20 PE=1
SV=1
Length = 276
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 80/202 (39%), Gaps = 40/202 (19%)
Query: 93 TEDLPPVLKAYPDKSAILTCL----NLLKTSFSEDYRPQEIIEIIAARPNLNKWAVSIAT 148
E++ + K ++ CL N L+T F+++ R E++ + + S++
Sbjct: 82 VENISKRCGGFLRKLSLRGCLGVGDNALRT-FAQNCRNIEVLSLNGCTKTTDATCTSLSK 140
Query: 149 NCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARISEEGLIQLFSGLPLLEELALDVGKN 208
C +L L LA +++ M L L G PLLE+L +
Sbjct: 141 FCSKLRHLDLASCTSITNM-------------------SLKALSEGCPLLEQLNISWCDQ 181
Query: 209 VRDSGSASEALKSKCVNLKGLKL--------------GQLHSWLESLSIKNCGDLSDMSL 254
V G +AL C LK L L G L +L+++ C ++D L
Sbjct: 182 VTKDGI--QALVRGCGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGL 239
Query: 255 VAIGRGCSKLVKFEVEGCKNIT 276
+ I RGC KL GC NIT
Sbjct: 240 ITICRGCHKLQSLCASGCSNIT 261
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 231 LGQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLA 284
L + S L L + +C +++MSL A+ GC L + + C +T DG++ L
Sbjct: 138 LSKFCSKLRHLDLASCTSITNMSLKALSEGCPLLEQLNISWCDQVTKDGIQALV 191
>sp|Q9S9X4|FBL8_ARATH Putative F-box/LRR-repeat protein 8 OS=Arabidopsis thaliana GN=FBL8
PE=4 SV=1
Length = 554
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 85/186 (45%), Gaps = 35/186 (18%)
Query: 129 IIEIIAARPNLNKWAVSIATNCPRLTLLHLAETS-------TLAAMR----GDPDDDGFT 177
I+EI R ++ ++ + C + +LHL +T L A R DG+
Sbjct: 294 IVEIHLERIQMSDLGLTALSKCSGVEVLHLVKTPDCTNVGLALVAERCKLLRKLHIDGWK 353
Query: 178 AEDARISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKL------ 231
RI +EGLI + L+EL L +G N + + EA+ S C+NL+ L L
Sbjct: 354 TN--RIGDEGLIVVAKYCWNLQELVL-IGVN--PTKLSLEAIVSNCLNLERLALCGSDTV 408
Query: 232 --------GQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTL 283
+ L L IKNC ++D + A+G GC L+K +V+ C+ +T G
Sbjct: 409 GDTELCCIAEKCLALRKLCIKNC-PITDDGIKALGNGCPNLLKVKVKKCRGVTTQG---- 463
Query: 284 ASLLRE 289
A LLR+
Sbjct: 464 ADLLRK 469
>sp|Q9C626|FB37_ARATH F-box protein At1g47056 OS=Arabidopsis thaliana GN=At1g47056 PE=2
SV=1
Length = 518
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 103/242 (42%), Gaps = 46/242 (19%)
Query: 81 LTSVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSFSEDYRPQE-------IIEII 133
L S+ L Y+ P ++ A KS L L + S D QE ++EI
Sbjct: 211 LKSICLKELYNGQCFGPVIVGAKNLKS-----LKLFRCSGDWDLLLQEMSGKDHGVVEIH 265
Query: 134 AARPNLNKWAVSIATNCPRLTLLHLAETST-----LAAMRGDPDD------DGFTAEDAR 182
R ++ A+S + C L LHL +T LAA+ DG+ A
Sbjct: 266 LERMQVSDVALSAISYCSSLESLHLVKTPECTNFGLAAIAEKCKRLRKLHIDGWKAN--L 323
Query: 183 ISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSW----- 237
I +EGL+ + L+EL L +G N + + L +KC+NL+ L L ++
Sbjct: 324 IGDEGLVAVAKFCSQLQELVL-IGVN--PTTLSLGMLAAKCLNLERLALCGCDTFGDPEL 380
Query: 238 ---------LESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNI---TVDGLRTLAS 285
L L IKNC +SD+ + + GC L K +++ CK + D LRT+
Sbjct: 381 SCIAAKCPALRKLCIKNC-PISDVGIENLANGCPGLTKVKIKKCKGVLGGCADWLRTVRP 439
Query: 286 LL 287
+L
Sbjct: 440 ML 441
>sp|Q96IG2|FXL20_HUMAN F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2
Length = 436
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 38/196 (19%)
Query: 93 TEDLPPVLKAYPDKSAILTCL----NLLKTSFSEDYRPQEIIEIIAARPNLNKWAVSIAT 148
E++ + K ++ CL N L+T F+++ R E++ + + S++
Sbjct: 82 VENISKRCGGFLRKLSLRGCLGVGDNALRT-FAQNCRNIEVLNLNGCTKTTDATCTSLSK 140
Query: 149 NCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARISEEGLIQLFSGLPLLEELALDVGKN 208
C +L L LA +++ M L L G PLLE+L +
Sbjct: 141 FCSKLRHLDLASCTSITNM-------------------SLKALSEGCPLLEQLNISWCDQ 181
Query: 209 VRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFE 268
V G +AL C LK L L K C L D +L IG C +LV
Sbjct: 182 VTKDGI--QALVRGCGGLKALFL------------KGCTQLEDEALKYIGAHCPELVTLN 227
Query: 269 VEGCKNITVDGLRTLA 284
++ C IT +GL T+
Sbjct: 228 LQTCLQITDEGLITIC 243
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 35/158 (22%)
Query: 145 SIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTA--------------EDARISEEGLIQ 190
++ NCPRL +L +A S L D GFT E +I++ LIQ
Sbjct: 267 ALGQNCPRLRILEVARCSQLT-------DVGFTTLARNCHELEKMDLEECVQITDSTLIQ 319
Query: 191 LFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQL-HSWLESLSIKNCGDL 249
L P L+ L+L + + D G ++ L G H LE + + NC +
Sbjct: 320 LSIHCPRLQVLSLSHCELITDDG------------IRHLGNGACAHDQLEVIELDNCPLI 367
Query: 250 SDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLL 287
+D SL + + C L + E+ C+ IT G++ L + L
Sbjct: 368 TDASLEHL-KSCHSLERIELYDCQQITRAGIKRLRTHL 404
>sp|Q58DG6|FXL20_BOVIN F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2
Length = 436
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 38/196 (19%)
Query: 93 TEDLPPVLKAYPDKSAILTCL----NLLKTSFSEDYRPQEIIEIIAARPNLNKWAVSIAT 148
E++ + K ++ CL N L+T F+++ R E++ + + S++
Sbjct: 82 VENISKRCGGFLRKLSLRGCLGVGDNALRT-FAQNCRNIEVLNLNGCTKTTDATCTSLSK 140
Query: 149 NCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARISEEGLIQLFSGLPLLEELALDVGKN 208
C +L L LA +++ M L L G PLLE+L +
Sbjct: 141 FCSKLRHLDLASCTSITNM-------------------SLKALSEGCPLLEQLNISWCDQ 181
Query: 209 VRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFE 268
V G +AL C LK L L K C L D +L IG C +LV
Sbjct: 182 VTKDGI--QALVRGCGGLKALFL------------KGCTQLEDEALKYIGAHCPELVTLN 227
Query: 269 VEGCKNITVDGLRTLA 284
++ C IT +GL T+
Sbjct: 228 LQTCLQITDEGLITIC 243
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 35/158 (22%)
Query: 145 SIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTA--------------EDARISEEGLIQ 190
++ NCPRL +L +A S L D GFT E +I++ LIQ
Sbjct: 267 ALGQNCPRLRILEVARCSQLT-------DVGFTTLARNCHELEKMDLEECVQITDSTLIQ 319
Query: 191 LFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQL-HSWLESLSIKNCGDL 249
L P L+ L+L + + D G ++ L G H LE + + NC +
Sbjct: 320 LSIHCPRLQVLSLSHCELITDDG------------IRHLGNGACAHDQLEVIELDNCPLI 367
Query: 250 SDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLL 287
+D SL + + C L + E+ C+ IT G++ L + L
Sbjct: 368 TDASLEHL-KSCHSLERIELYDCQQITRAGIKRLRTHL 404
>sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3
Length = 436
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 38/196 (19%)
Query: 93 TEDLPPVLKAYPDKSAILTCL----NLLKTSFSEDYRPQEIIEIIAARPNLNKWAVSIAT 148
E++ + K ++ CL N L+T F+++ R E++ + + S++
Sbjct: 82 VENISKRCGGFLRKLSLRGCLGVGDNALRT-FAQNCRNIEVLSLNGCTKTTDATCTSLSK 140
Query: 149 NCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARISEEGLIQLFSGLPLLEELALDVGKN 208
C +L L LA +++ M L L G PLLE+L +
Sbjct: 141 FCSKLRHLDLASCTSITNM-------------------SLKALSEGCPLLEQLNISWCDQ 181
Query: 209 VRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFE 268
V G +AL C LK L L K C L D +L IG C +LV
Sbjct: 182 VTKDGI--QALVRGCGGLKALFL------------KGCTQLEDEALKYIGAHCPELVTLN 227
Query: 269 VEGCKNITVDGLRTLA 284
++ C IT +GL T+
Sbjct: 228 LQTCLQITDEGLITIC 243
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 35/158 (22%)
Query: 145 SIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTA--------------EDARISEEGLIQ 190
++ NCPRL +L +A S L D GFT E +I++ LIQ
Sbjct: 267 ALGQNCPRLRILEVARCSQLT-------DVGFTTLARNCHELEKMDLEECVQITDSTLIQ 319
Query: 191 LFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQL-HSWLESLSIKNCGDL 249
L P L+ L+L + + D G ++ L G H LE + + NC +
Sbjct: 320 LSIHCPRLQVLSLSHCELITDDG------------IRHLGNGACAHDQLEVIELDNCPLI 367
Query: 250 SDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLL 287
+D SL + + C L + E+ C+ IT G++ L + L
Sbjct: 368 TDASLEHL-KSCHSLERIELYDCQQITRAGIKRLRTHL 404
>sp|Q9SKK0|EBF1_ARATH EIN3-binding F-box protein 1 OS=Arabidopsis thaliana GN=EBF1 PE=1
SV=1
Length = 628
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 17/134 (12%)
Query: 183 ISEEGLIQLFSGLPLLEELALDVGKNVRDSG------SASEALKS----KCVNLKGLKLG 232
+S+ GL+ LE L L+ V G + E LK+ C++++ L G
Sbjct: 374 LSDNGLVSFAKASLSLESLQLEECHRVTQFGFFGSLLNCGEKLKAFSLVNCLSIRDLTTG 433
Query: 233 ---QLH-SWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLR 288
H S L SLSI+NC D +L AIG+ C +L ++ G K IT G L++
Sbjct: 434 LPASSHCSALRSLSIRNCPGFGDANLAAIGKLCPQLEDIDLCGLKGITESG---FLHLIQ 490
Query: 289 ETLVVIKIYCCENL 302
+LV I C NL
Sbjct: 491 SSLVKINFSGCSNL 504
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 67/177 (37%), Gaps = 47/177 (26%)
Query: 123 DYRPQEIIEIIAARPNLNKWAV--------------SIATNCPRLTLLHLAETSTLAAMR 168
D R I A R L K ++ SI +CP L L L ST
Sbjct: 135 DVRLAAIAVGTAGRGGLGKLSIRGSNSAKVSDLGLRSIGRSCPSLGSLSLWNVST----- 189
Query: 169 GDPDDDGFTAEDARISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKG 228
I++ GL+++ G LE+L L+ + D G A+ C NL
Sbjct: 190 --------------ITDNGLLEIAEGCAQLEKLELNRCSTITDKGLV--AIAKSCPNLT- 232
Query: 229 LKLGQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLAS 285
L+++ C + D L+AI R CSKL ++ C + G+ +L S
Sbjct: 233 -----------ELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQGIASLLS 278
>sp|P34284|YKK7_CAEEL Uncharacterized F-box/LRR-repeat protein C02F5.7 OS=Caenorhabditis
elegans GN=C02F5.7 PE=4 SV=3
Length = 466
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 238 LESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIY 297
LE L +++C +SD ++ ++ C+ L + + C+ IT + ++ LAS RETL V+++
Sbjct: 333 LERLDMEDCSLISDHTINSLANNCTALRELSLSHCELITDESIQNLASKHRETLNVLELD 392
Query: 298 CC-----ENLGAVASCKALKPI 314
C L + CKALK I
Sbjct: 393 NCPQLTDSTLSHLRHCKALKRI 414
Score = 39.7 bits (91), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 197 LLEELALDVGKNVRDSGSASEALKSKCVNLKGL--------------KLGQLHSWLESLS 242
L+EL+L +NV DS A S+C NL+ L LG+ L L+
Sbjct: 124 FLKELSLKGCENVHDS--ALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKLNYLN 181
Query: 243 IKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLAS 285
++NC ++D ++ IG GC L + C I G++ + S
Sbjct: 182 LENCSSITDRAMKYIGDGCPNLSYLNISWCDAIQDRGVQIILS 224
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 238 LESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRE 289
LE L + NC +SD SLV++G+ L E+ GC + +G LA R+
Sbjct: 281 LEYLCMSNCNQISDRSLVSLGQHSHNLKVLELSGCTLLGDNGFIPLARGCRQ 332
>sp|D4ABB4|FXL15_RAT F-box/LRR-repeat protein 15 OS=Rattus norvegicus GN=Fbxl15 PE=3
SV=1
Length = 300
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 80/221 (36%), Gaps = 59/221 (26%)
Query: 69 AEFVPLLKHCKCLTSVDLSSFYHWT--EDLPPVLKAYPD--KSAILTCLNLLKTSFSEDY 124
A V LL+ + L + L+ + W EDL PVL P A+ C L + +
Sbjct: 77 AALVRLLRDAEGLQELALAPCHEWLLDEDLVPVLARNPQLRSVALAGCGQLSRRALG--- 133
Query: 125 RPQEIIEIIAARPNLNKWAVSIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARIS 184
++A CPRL + LA + DG
Sbjct: 134 --------------------ALAEGCPRLQRISLAHCDWV---------DGLA------- 157
Query: 185 EEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIK 244
L L P LEEL L + ++D A + + L SLS+
Sbjct: 158 ---LRGLADRCPALEELDLTACRQLKDEAIVYLAQRRG-------------AGLRSLSLA 201
Query: 245 NCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLAS 285
++ D ++ + R C +L ++ GC + DG+RTLA
Sbjct: 202 VNANVGDTAVQELARNCPQLEHLDLTGCLRVGSDGVRTLAE 242
>sp|Q8WV35|LRC29_HUMAN Leucine-rich repeat-containing protein 29 OS=Homo sapiens GN=LRRC29
PE=2 SV=1
Length = 223
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 18/113 (15%)
Query: 183 ISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSW--LES 240
+++ GL+ + G P LE LAL + D G A A SW L+
Sbjct: 113 LTDNGLVAVARGCPSLEHLALSHCSRLSDKGWAQAA----------------SSWPRLQH 156
Query: 241 LSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVV 293
L++ +C L + +L AIG+ C +L +V C I + +R + L + V
Sbjct: 157 LNLSSCSQLIEQTLDAIGQACRQLRVLDVATCPGINMAAVRRFQAQLPQVSCV 209
>sp|Q91W61|FXL15_MOUSE F-box/LRR-repeat protein 15 OS=Mus musculus GN=Fbxl15 PE=1 SV=2
Length = 300
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 79/221 (35%), Gaps = 59/221 (26%)
Query: 69 AEFVPLLKHCKCLTSVDLSSFYHWT--EDLPPVLKAYPD--KSAILTCLNLLKTSFSEDY 124
A LL+ + L + L+ + W EDL PVL P A+ C L + +
Sbjct: 77 AALARLLRDAEGLQELALAPCHEWLSDEDLVPVLARNPQLRSVALAGCGQLSRRALG--- 133
Query: 125 RPQEIIEIIAARPNLNKWAVSIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARIS 184
++A CPRL L LA + DG
Sbjct: 134 --------------------ALAEGCPRLQRLSLAHCDWV---------DGLA------- 157
Query: 185 EEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIK 244
L L P LEEL L + ++D A + + L SLS+
Sbjct: 158 ---LRGLADRCPALEELDLTACRQLKDEAIVYLAQRRG-------------AGLRSLSLA 201
Query: 245 NCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLAS 285
++ D ++ + R C +L ++ GC + DG+RTLA
Sbjct: 202 VNANVGDTAVQELARNCPQLEHLDLTGCLRVGSDGVRTLAE 242
>sp|A1A5X2|FBXL7_DANRE F-box/LRR-repeat protein 7 OS=Danio rerio GN=fbxl7 PE=2 SV=1
Length = 489
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 33/140 (23%)
Query: 145 SIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARISEEGLIQLFSGLPLLEELALD 204
+IA +C +LT L+L R+++EGL L P + EL++
Sbjct: 290 TIAAHCTQLTHLYLRRC-------------------VRLTDEGLRFLVIYCPGVRELSVS 330
Query: 205 VGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKL 264
+ + D G ++ +L L LSI +C ++D+ + + + CS+L
Sbjct: 331 DCRFISDFGLR--------------EIAKLEGRLRYLSIAHCSRITDVGVRYVAKYCSRL 376
Query: 265 VKFEVEGCKNITVDGLRTLA 284
GC+ +T G+ LA
Sbjct: 377 RYLNARGCEGLTDHGIEHLA 396
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 64/163 (39%), Gaps = 37/163 (22%)
Query: 128 EIIEIIAARPNLNKWAVSIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARISEEG 187
E + + R ++ ++A +CP L L +A +S E
Sbjct: 187 ETVMVSGCRRLTDRGLYTVAQSCPELRRLEVAGCYN-------------------VSNEA 227
Query: 188 LIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLK---GLKLGQLHSW---LESL 241
+ ++ S P LE L DV SG + K C++L +KL LH + L
Sbjct: 228 VFEVVSRCPNLEHL--DV------SGCS----KVTCISLTRDVSVKLSPLHGQQISIRFL 275
Query: 242 SIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLA 284
+ +C L D L I C++L + C +T +GLR L
Sbjct: 276 DMTDCFALEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRFLV 318
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 238 LESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLAS 285
+E++ + C L+D L + + C +L + EV GC N++ + + + S
Sbjct: 186 VETVMVSGCRRLTDRGLYTVAQSCPELRRLEVAGCYNVSNEAVFEVVS 233
>sp|E2RKN7|FXL15_CANFA F-box/LRR-repeat protein 15 OS=Canis familiaris GN=FBXL15 PE=3 SV=1
Length = 300
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 78/216 (36%), Gaps = 59/216 (27%)
Query: 74 LLKHCKCLTSVDLSSFYHWT--EDLPPVLKAYPD--KSAILTCLNLLKTSFSEDYRPQEI 129
LL+ + L + L+ + W EDL PVL P A+ C L + +
Sbjct: 82 LLRDAEGLQELALAPCHEWLSDEDLVPVLTRNPQLRSVALAGCGQLSRRALG-------- 133
Query: 130 IEIIAARPNLNKWAVSIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARISEEGLI 189
++A CPRL L LA + DG L
Sbjct: 134 ---------------ALAEGCPRLQRLSLAHCDWV---------DGLA----------LR 159
Query: 190 QLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDL 249
L P LEEL L + ++D A + + L SLS+ ++
Sbjct: 160 GLADRCPALEELDLTACRQLKDEAIVYLAQRRG-------------AGLRSLSLAVNANV 206
Query: 250 SDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLAS 285
D ++ + R C +L ++ GC + DG+RTLA
Sbjct: 207 GDAAVQELARNCPELEHLDLTGCLRVGSDGVRTLAE 242
>sp|Q9H469|FXL15_HUMAN F-box/LRR-repeat protein 15 OS=Homo sapiens GN=FBXL15 PE=1 SV=2
Length = 300
Score = 40.8 bits (94), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 79/221 (35%), Gaps = 59/221 (26%)
Query: 69 AEFVPLLKHCKCLTSVDLSSFYHWT--EDLPPVLKAYPD--KSAILTCLNLLKTSFSEDY 124
A LL+ + L + L+ + W EDL PVL P A+ C L + +
Sbjct: 77 AALARLLRDAEGLQELALAPCHEWLSDEDLVPVLARNPQLRSVALGGCGQLSRRALG--- 133
Query: 125 RPQEIIEIIAARPNLNKWAVSIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARIS 184
++A CPRL L LA + DG
Sbjct: 134 --------------------ALAEGCPRLQRLSLAHCDWV---------DGLA------- 157
Query: 185 EEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIK 244
L L P LEEL L + ++D A + + L SLS+
Sbjct: 158 ---LRGLADRCPALEELDLTACRQLKDEAIVYLAQRRG-------------AGLRSLSLA 201
Query: 245 NCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLAS 285
++ D ++ + R C +L ++ GC + DG+RTLA
Sbjct: 202 VNANVGDAAVQELARNCPELHHLDLTGCLRVGSDGVRTLAE 242
>sp|Q9FGN4|FB289_ARATH F-box protein At5g51370 OS=Arabidopsis thaliana GN=At5g51370 PE=2
SV=1
Length = 446
Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 25/125 (20%)
Query: 184 SEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSI 243
SE GL+ L L+EL L + G A+ C NLKGL+L L S S+
Sbjct: 162 SELGLLSLAGDCSDLQELELHKCNDNLLHGIAA------CKNLKGLRLVGSVDGLYSSSV 215
Query: 244 KNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLG 303
SD+ L + +GC LVK E+ GC+ + DG++ + CCE L
Sbjct: 216 ------SDIGLTFLAQGCRSLVKLELSGCEG-SFDGIKAIGQ------------CCEVLE 256
Query: 304 AVASC 308
++ C
Sbjct: 257 ELSIC 261
>sp|E1BNS0|FXL15_BOVIN F-box/LRR-repeat protein 15 OS=Bos taurus GN=FBXL15 PE=3 SV=1
Length = 300
Score = 40.8 bits (94), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 78/216 (36%), Gaps = 59/216 (27%)
Query: 74 LLKHCKCLTSVDLSSFYHWT--EDLPPVLKAYPD--KSAILTCLNLLKTSFSEDYRPQEI 129
LL+ + L + L+ + W EDL PVL P A+ C L + +
Sbjct: 82 LLRDAEGLQELALAPCHEWLSDEDLVPVLARNPQLRSVALAGCGQLSRRALG-------- 133
Query: 130 IEIIAARPNLNKWAVSIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARISEEGLI 189
++A CPRL L LA + DG L
Sbjct: 134 ---------------ALAEGCPRLQRLSLAHCDWV---------DGLA----------LR 159
Query: 190 QLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDL 249
L P LEEL L + ++D A + + L +LS+ ++
Sbjct: 160 GLADRCPALEELDLTACRQLKDEAIVYLAQRRG-------------AGLRNLSLAVNANV 206
Query: 250 SDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLAS 285
D ++ + R C +L ++ GC + DG+RTLA
Sbjct: 207 GDTAVQELARNCPELQHLDLTGCLRVGSDGIRTLAE 242
>sp|Q9FGN3|FB290_ARATH F-box protein At5g51380 OS=Arabidopsis thaliana GN=At5g51380 PE=2
SV=1
Length = 479
Score = 40.4 bits (93), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 25/125 (20%)
Query: 184 SEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSI 243
+E GL+ L L+EL L + G A+ C NL+GL+L L S S+
Sbjct: 198 TELGLLSLAEDCSDLQELELHKCSDNLLRGIAA------CENLRGLRLVGSVDGLYSSSV 251
Query: 244 KNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLG 303
SD+ L + +GC +LVK E+ GC+ + DG++ + CCE L
Sbjct: 252 ------SDIGLTILAQGCKRLVKLELSGCEG-SFDGIKAIGQ------------CCEVLE 292
Query: 304 AVASC 308
++ C
Sbjct: 293 ELSIC 297
>sp|Q9UF56|FXL17_HUMAN F-box/LRR-repeat protein 17 OS=Homo sapiens GN=FBXL17 PE=2 SV=3
Length = 701
Score = 40.0 bits (92), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 14/117 (11%)
Query: 182 RISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESL 241
++S+ +I + S PLL+++ + + D G + L SKC LK + GQ
Sbjct: 424 QLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGL--KQLGSKCRELKDIHFGQ-------- 473
Query: 242 SIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYC 298
C +SD ++ I +GC KL + ++ K +T ++ A E V + C
Sbjct: 474 ----CYKISDEGMIVIAKGCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGC 526
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 246 CGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRE 289
C LSD S++A+ C L K V +T +GL+ L S RE
Sbjct: 422 CKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSKCRE 465
>sp|Q8NEE6|FXL13_HUMAN F-box/LRR-repeat protein 13 OS=Homo sapiens GN=FBXL13 PE=2 SV=3
Length = 735
Score = 39.7 bits (91), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 238 LESLSIKNCGDLSDMSL--VAIGRGCSKLVKFEVEGCKNITVDGLRTLAS 285
L++LS+ C +D L + +G GC KL+ ++ GC I+V G R +A+
Sbjct: 298 LQNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIAN 347
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 19/144 (13%)
Query: 177 TAEDARISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHS 236
+E RI+++G IQ F L+ E LDV + S +AL C+NL
Sbjct: 561 VSECYRITDDG-IQAFCKSSLILE-HLDVSYCSQLSDMIIKALAIYCINL---------- 608
Query: 237 WLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKI 296
SLSI C ++D ++ + C L ++ GC +T L L ++ L ++K+
Sbjct: 609 --TSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCKQ-LRILKM 665
Query: 297 YCCENLGAVASCKALKPIRDRIQK 320
C N+ KA + + ++Q+
Sbjct: 666 QYCTNISK----KAAQRMSSKVQQ 685
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 20/148 (13%)
Query: 143 AVSIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTA-----EDARISEEGLIQLFSGLPL 197
+ ++ CP L L L L A + F+ IS EGL + S
Sbjct: 497 VMKLSERCPNLNYLSLRNCEHLTAQGIGYIVNIFSLVSIDLSGTDISNEGL-NVLSRHKK 555
Query: 198 LEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDLSDMSLVAI 257
L+EL++ + D G + KS + LE L + C LSDM + A+
Sbjct: 556 LKELSVSECYRITDDGIQAFC-KSSLI-------------LEHLDVSYCSQLSDMIIKAL 601
Query: 258 GRGCSKLVKFEVEGCKNITVDGLRTLAS 285
C L + GC IT + L++
Sbjct: 602 AIYCINLTSLSIAGCPKITDSAMEMLSA 629
>sp|B4N549|QTRD1_DROWI Queuine tRNA-ribosyltransferase subunit QTRTD1 homolog
OS=Drosophila willistoni GN=GK20504 PE=3 SV=1
Length = 428
Score = 39.7 bits (91), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 41 SLLFSPSSSSMDPRLLADLLQMSFLCFGAEFVPLLKHCKCL-----TSVDLSSFYHWTED 95
+L+F+ S++PR L ++ EFVPLL +CKCL T + Y E
Sbjct: 298 ALVFNYDEKSIEPRP-TPFLDITDEAIKEEFVPLLDNCKCLTCQKHTRAYVHHLYKTNEL 356
Query: 96 LPPVLKAYPDKSAILTCLNLLKTSFSEDYRPQEIIEIIAARPNLNKWAVSIATNC 150
L P+L + + +++S ++D P+ +I+++ + +K SI N
Sbjct: 357 LGPILLMIHNLHHFMGFFETIRSSIAQDKLPK-LIDLVCKQNGDSKVDYSIEKNV 410
>sp|Q01207|POL2_BAYMJ Genome polyprotein 2 OS=Barley yellow mosaic virus (strain Japanese
II-1) GN=RNA2 PE=3 SV=1
Length = 890
Score = 38.9 bits (89), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 66 CFGAEFVPLLKHCKCLTSVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSFSEDYR 125
C+ + F+PL +T + SF + E LP +L AYP +AI + F E
Sbjct: 143 CYLSLFIPL---SFRITFENARSFSRFLEQLPDILGAYPTLAAIYKTMLFAIRLFPEVL- 198
Query: 126 PQEIIEIIAARPNLNKWAVSIATNCP 151
Q I IIA RP + ++ VS A P
Sbjct: 199 -QAPIPIIAKRPGVLQFHVSDARGLP 223
>sp|Q6INS1|FBXL5_XENLA F-box/LRR-repeat protein 5 OS=Xenopus laevis GN=fbxl5 PE=2 SV=1
Length = 678
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 238 LESLSIKNCGDLSDMSLVA--IGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIK 295
L+ LS+ C ++D L A IG G KL + GC N+T GL+ L + +L
Sbjct: 587 LQFLSLSGCHQITDHGLRALTIGGGLPKLEHLNLSGCLNVTGSGLQDLVATC-PSLNDEH 645
Query: 296 IYCCENL----GAVAS-CKALK 312
Y C+N+ GA AS C+ L+
Sbjct: 646 FYYCDNISGPHGATASGCQNLQ 667
>sp|Q9YJW2|POL2_BAYMY Genome polyprotein 2 OS=Barley yellow mosaic virus (isolate
China/Yancheng/1998) PE=3 SV=1
Length = 890
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 66 CFGAEFVPLLKHCKCLTSVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSFSEDYR 125
C+ + F+PL +T + F + E LP +L AYP +AI + F E
Sbjct: 143 CYLSLFIPL---SFRITFENARGFSRFLEQLPDILGAYPTLAAIYKTMLFAIRLFPEVL- 198
Query: 126 PQEIIEIIAARPNLNKWAVSIATNCP 151
Q I IIA RP + ++ VS A P
Sbjct: 199 -QAPIPIIAKRPGVLQFHVSDARGLP 223
>sp|Q9UKC9|FBXL2_HUMAN F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3
Length = 423
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 33/157 (21%)
Query: 145 SIATNCPRLTLLHLAETSTLAAMRGDPDDDGFT--------------AEDARISEEGLIQ 190
++ NCPRL +L A S L D GFT E I++ LIQ
Sbjct: 254 ALGLNCPRLQILEAARCSHLT-------DAGFTLLARNCHELEKMDLEECILITDSTLIQ 306
Query: 191 LFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDLS 250
L P L+ L+L + + D G ++L G H L L + NC ++
Sbjct: 307 LSIHCPKLQALSLSHCELITDDGI---------LHLSNSTCG--HERLRVLELDNCLLIT 355
Query: 251 DMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLL 287
D++L + C L + E+ C+ +T G++ + + L
Sbjct: 356 DVALEHL-ENCRGLERLELYDCQQVTRAGIKRMRAQL 391
Score = 36.2 bits (82), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
Query: 181 ARISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALK---------SKCVNLK--GL 229
+RI++EG++Q+ G L+ L L N+ D+ + L ++C +L G
Sbjct: 219 SRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGF 278
Query: 230 KL-GQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLAS 285
L + LE + ++ C ++D +L+ + C KL + C+ IT DG+ L++
Sbjct: 279 TLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSN 335
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 209 VRDSGSASEALKSKCVNLKGLKLGQLHSW---LESLSIKNCGDLSDMSLVAIGRGCSKLV 265
VR L C L+ L + ++ L SL++++C ++D +V I RGC +L
Sbjct: 178 VRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQ 237
Query: 266 KFEVEGCKNITVDGLRTLA 284
+ GC N+T L L
Sbjct: 238 ALCLSGCSNLTDASLTALG 256
>sp|O49286|SKP2B_ARATH F-box protein SKP2B OS=Arabidopsis thaliana GN=SKP2B PE=1 SV=1
Length = 360
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 41/177 (23%)
Query: 113 LNLLKTSFSEDYRPQEIIEIIAARPNLNKWAV-SIATNCPRLTLLHLAETSTLAAMRGDP 171
+N L S + + + + + +P L AV +IA +C L L L+++S
Sbjct: 78 MNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSS--------- 128
Query: 172 DDDGFTAEDARISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKL 231
+I++ L L G L +L L S C + L
Sbjct: 129 ----------KITDHSLYSLARGCTNLTKLNL-----------------SGCTSFSDTAL 161
Query: 232 GQLHSWLESLSIKN-CG---DLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLA 284
L + L I N CG +SD +L AIG C++L + C+NI+ DG+ +LA
Sbjct: 162 AHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLA 218
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 238 LESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIY 297
L+ L + ++D SL ++ RGC+ L K + GC + + L L R+ ++
Sbjct: 119 LQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCG 178
Query: 298 CCE 300
C E
Sbjct: 179 CVE 181
>sp|Q5R3Z8|FBXL2_PONAB F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1
Length = 423
Score = 37.4 bits (85), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 33/157 (21%)
Query: 145 SIATNCPRLTLLHLAETSTLAAMRGDPDDDGFT--------------AEDARISEEGLIQ 190
++ NCPRL +L A S L D GFT E I++ LIQ
Sbjct: 254 ALGLNCPRLQILEAARCSHLT-------DAGFTLLARNCHELEKMDLEECILITDSTLIQ 306
Query: 191 LFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDLS 250
L P L+ L+L + + D G ++L G H L L + NC ++
Sbjct: 307 LSIHCPKLQALSLSHCELITDDGI---------LHLSNSTCG--HERLRVLELDNCLLIT 355
Query: 251 DMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLL 287
D++L + C L + E+ C+ +T G++ + + L
Sbjct: 356 DVALEHL-ENCRGLERLELYDCQQVTRAGIKRMRAQL 391
Score = 36.2 bits (82), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
Query: 181 ARISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALK---------SKCVNLK--GL 229
+RI++EG++Q+ G L+ L L N+ D+ + L ++C +L G
Sbjct: 219 SRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGF 278
Query: 230 KL-GQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLAS 285
L + LE + ++ C ++D +L+ + C KL + C+ IT DG+ L++
Sbjct: 279 TLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSN 335
Score = 35.8 bits (81), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 209 VRDSGSASEALKSKCVNLKGLKLGQLHSW---LESLSIKNCGDLSDMSLVAIGRGCSKLV 265
VR L C L+ L + ++ L SL++++C ++D +V I RGC +L
Sbjct: 178 VRGCRGLKALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRITDEGVVQICRGCHRLQ 237
Query: 266 KFEVEGCKNITVDGLRTLA 284
+ GC N+T L L
Sbjct: 238 ALCLSGCSNLTDASLTALG 256
>sp|B7NR46|ASNA_ECO7I Aspartate--ammonia ligase OS=Escherichia coli O7:K1 (strain IAI39 /
ExPEC) GN=asnA PE=3 SV=1
Length = 330
Score = 37.4 bits (85), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 28/105 (26%)
Query: 260 GCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQ 319
GC K V+ +V+ + + + +LA R+TL E L KAL+P DR+
Sbjct: 50 GCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGL--YTHMKALRPDEDRLS 107
Query: 320 KLH--------------------------IDCVWDGIRSSEAKAT 338
LH ++ +W+GI+++EA +
Sbjct: 108 SLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWEGIKATEAAVS 152
>sp|Q8BH16|FBXL2_MOUSE F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=1 SV=1
Length = 423
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 65/157 (41%), Gaps = 33/157 (21%)
Query: 145 SIATNCPRLTLLHLAETSTLAAMRGDPDDDGFT--------------AEDARISEEGLIQ 190
++ NCPRL +L A S L D GFT E I++ L+Q
Sbjct: 254 ALGLNCPRLQVLEAARCSHLT-------DAGFTLLARNCHELEKMDLEECVLITDSTLVQ 306
Query: 191 LFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDLS 250
L P L+ L+L + + D G ++L G H L L + NC ++
Sbjct: 307 LSIHCPKLQALSLSHCELITDEGI---------LHLSSSTCG--HERLRVLELDNCLLVT 355
Query: 251 DMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLL 287
D SL + C L + E+ C+ +T G++ + + L
Sbjct: 356 DASLEHL-ENCRGLERLELYDCQQVTRAGIKRMRAQL 391
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Query: 182 RISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSW-LES 240
+I++EG+ L G L+ L L + D EALK Q H L S
Sbjct: 168 QITKEGIEALVRGCRGLKALLLRGCTQLED-----EALKHI----------QNHCHELVS 212
Query: 241 LSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLA 284
L++++C ++D +V I RGC +L + GC N+T L L
Sbjct: 213 LNLQSCSRITDDGVVQICRGCHRLQALCLSGCSNLTDASLTALG 256
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
Query: 238 LESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRE-------- 289
L++L + C +L+D SL A+G C +L E C ++T G LA E
Sbjct: 236 LQALCLSGCSNLTDASLTALGLNCPRLQVLEAARCSHLTDAGFTLLARNCHELEKMDLEE 295
Query: 290 -------TLVVIKIYC 298
TLV + I+C
Sbjct: 296 CVLITDSTLVQLSIHC 311
>sp|Q01365|POL2_BAYMG Genome polyprotein 2 OS=Barley yellow mosaic virus (isolate
Germany) GN=RNA2 PE=3 SV=1
Length = 890
Score = 37.0 bits (84), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 66 CFGAEFVPLLKHCKCLTSVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSFSEDYR 125
C+ + F+PL +T + SF + E LP +L AYP +++ + F E
Sbjct: 143 CYLSLFIPL---SFRITPENARSFSRFLEQLPDILGAYPTLASLYKTMLFAVRLFPEVL- 198
Query: 126 PQEIIEIIAARPNLNKWAVSIATNCP 151
Q I IIA RP + ++ VS A P
Sbjct: 199 -QAPIPIIAKRPGVLQFHVSDARGLP 223
>sp|Q1R4I8|ASNA_ECOUT Aspartate--ammonia ligase OS=Escherichia coli (strain UTI89 / UPEC)
GN=asnA PE=3 SV=1
Length = 330
Score = 37.0 bits (84), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 28/105 (26%)
Query: 260 GCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQ 319
GC K V+ +V+ + + + +LA R+TL E L KAL+P DR+
Sbjct: 50 GCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGL--YTHMKALRPDEDRLS 107
Query: 320 KLH--------------------------IDCVWDGIRSSEAKAT 338
LH ++ +W+GI+++EA +
Sbjct: 108 PLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWEGIKATEAAVS 152
>sp|B7NF60|ASNA_ECOLU Aspartate--ammonia ligase OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=asnA PE=3 SV=1
Length = 330
Score = 37.0 bits (84), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 28/105 (26%)
Query: 260 GCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQ 319
GC K V+ +V+ + + + +LA R+TL E L KAL+P DR+
Sbjct: 50 GCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGL--YTHMKALRPDEDRLS 107
Query: 320 KLH--------------------------IDCVWDGIRSSEAKAT 338
LH ++ +W+GI+++EA +
Sbjct: 108 PLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWEGIKATEAAVS 152
>sp|A1AHS4|ASNA_ECOK1 Aspartate--ammonia ligase OS=Escherichia coli O1:K1 / APEC GN=asnA
PE=3 SV=1
Length = 330
Score = 37.0 bits (84), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 28/105 (26%)
Query: 260 GCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQ 319
GC K V+ +V+ + + + +LA R+TL E L KAL+P DR+
Sbjct: 50 GCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGL--YTHMKALRPDEDRLS 107
Query: 320 KLH--------------------------IDCVWDGIRSSEAKAT 338
LH ++ +W+GI+++EA +
Sbjct: 108 PLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWEGIKATEAAVS 152
>sp|B7MGG4|ASNA_ECO45 Aspartate--ammonia ligase OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=asnA PE=3 SV=1
Length = 330
Score = 37.0 bits (84), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 28/105 (26%)
Query: 260 GCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQ 319
GC K V+ +V+ + + + +LA R+TL E L KAL+P DR+
Sbjct: 50 GCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGL--YTHMKALRPDEDRLS 107
Query: 320 KLH--------------------------IDCVWDGIRSSEAKAT 338
LH ++ +W+GI+++EA +
Sbjct: 108 PLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWEGIKATEAAVS 152
>sp|A6H779|FBXL2_BOVIN F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1
Length = 423
Score = 36.6 bits (83), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 181 ARISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALK---------SKCVNLK--GL 229
+R++++G++QL G P L+ L L ++ D+ + AL ++C +L G
Sbjct: 219 SRVTDDGVVQLCRGCPRLQALCLSGCGSLTDASLTALALNCPRLQILEAARCSHLTDAGF 278
Query: 230 KLGQLHSW-LESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLAS 285
L + LE + ++ C ++D +L + C KL + C+ IT DG+ L++
Sbjct: 279 TLLARNCHDLEKMDLEECILITDRTLTQLSIHCPKLQALSLSHCELITDDGILHLSN 335
Score = 36.2 bits (82), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 66/157 (42%), Gaps = 33/157 (21%)
Query: 145 SIATNCPRLTLLHLAETSTLAAMRGDPDDDGFT--------------AEDARISEEGLIQ 190
++A NCPRL +L A S L D GFT E I++ L Q
Sbjct: 254 ALALNCPRLQILEAARCSHLT-------DAGFTLLARNCHDLEKMDLEECILITDRTLTQ 306
Query: 191 LFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDLS 250
L P L+ L+L + + D G ++L G H L L + NC ++
Sbjct: 307 LSIHCPKLQALSLSHCELITDDGI---------LHLSNSPCG--HERLRVLELDNCLLIT 355
Query: 251 DMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLL 287
D++L + C L + E+ C+ +T G++ + + L
Sbjct: 356 DVALEHL-EHCRGLERLELYDCQQVTRAGIKRMRAQL 391
Score = 32.3 bits (72), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 209 VRDSGSASEALKSKCVNLKGLKLGQLHSW---LESLSIKNCGDLSDMSLVAIGRGCSKLV 265
VR L C L+ L + ++ L SL++++C ++D +V + RGC +L
Sbjct: 178 VRGCRGLRALLLRGCTQLEDEALKHIQNYCHELVSLNLQSCSRVTDDGVVQLCRGCPRLQ 237
Query: 266 KFEVEGCKNITVDGLRTLA 284
+ GC ++T L LA
Sbjct: 238 ALCLSGCGSLTDASLTALA 256
>sp|Q9UKA2|FBXL4_HUMAN F-box/LRR-repeat protein 4 OS=Homo sapiens GN=FBXL4 PE=1 SV=2
Length = 621
Score = 36.2 bits (82), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 236 SWLESLSIKNCGDLSDMSLVA--IGRGCSKLVKFEVEGCKNITVDGLRTLAS 285
S L+ LS+ +C + D ++A IG C KL ++ CKNIT +G+ LAS
Sbjct: 451 SELQHLSLGSCVMIEDYDVIASMIGAKCKKLRTLDLWRCKNITENGIAELAS 502
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 183 ISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLS 242
I+E G+ +L SG PLLEEL L ++ S L + NL+ L L S
Sbjct: 492 ITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFLTANRS------ 545
Query: 243 IKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTL 283
+ D + + C++L + ++ G + ++ LR L
Sbjct: 546 ------VCDTDIDELACNCTRLQQLDILGTRMVSPASLRKL 580
>sp|Q9SMY8|FBL15_ARATH F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana GN=FBL15 PE=1
SV=2
Length = 990
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 238 LESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIY 297
LESL + NC +SD +L I + C+ L C NI+++ + L V+K++
Sbjct: 397 LESLDVSNCSCVSDETLREIAQACANLHILNASYCPNISLESVHL------PMLTVLKLH 450
Query: 298 CCENLGAVA 306
CE + + +
Sbjct: 451 SCEGITSAS 459
>sp|Q9QZN1|FXL17_MOUSE F-box/LRR-repeat protein 17 OS=Mus musculus GN=Fbxl17 PE=2 SV=3
Length = 701
Score = 36.2 bits (82), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 14/117 (11%)
Query: 182 RISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESL 241
++S+ +I + S PLL+++ + + D G + L S+C LK + GQ
Sbjct: 424 QLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGL--KQLGSRCRELKDIHFGQ-------- 473
Query: 242 SIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYC 298
C +SD ++ I + C KL + ++ K +T ++ A E V + C
Sbjct: 474 ----CYKISDEGMIVIAKSCLKLQRIYMQENKLVTDQSVKAFAEHCPELQYVGFMGC 526
Score = 32.7 bits (73), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 246 CGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRE 289
C LSD S++A+ C L K V +T +GL+ L S RE
Sbjct: 422 CKQLSDTSIIAVASHCPLLQKVHVGNQDKLTDEGLKQLGSRCRE 465
>sp|B7UMK9|ASNA_ECO27 Aspartate--ammonia ligase OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=asnA PE=3 SV=1
Length = 330
Score = 35.8 bits (81), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 28/105 (26%)
Query: 260 GCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQ 319
GC K V+ +V+ + + + +LA R+TL E L KAL+P DR+
Sbjct: 50 GCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGL--YTHMKALRPDEDRLS 107
Query: 320 KLH--------------------------IDCVWDGIRSSEAKAT 338
LH ++ +W GI+++EA +
Sbjct: 108 PLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWGGIKATEAAVS 152
>sp|B5X441|FXL15_SALSA F-box/LRR-repeat protein 15 OS=Salmo salar GN=fbxl15 PE=2 SV=1
Length = 292
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 238 LESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIY 297
+ SLS+ +++D+S+ + + C +L + ++ GC + D +RT+A + L +K+
Sbjct: 187 MRSLSVAVNANITDVSVEEVAKNCRELEQLDLTGCLRVRNDSIRTVAEYCPK-LQSLKVN 245
Query: 298 CCENLGAVASCKALKPIRDR 317
C N+ +L P+R R
Sbjct: 246 HCHNVTE----SSLDPLRKR 261
>sp|Q0VD31|FBXL4_BOVIN F-box/LRR-repeat protein 4 OS=Bos taurus GN=FBXL4 PE=2 SV=1
Length = 621
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 12/101 (11%)
Query: 183 ISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLS 242
I+E G+ +L SG PLLEEL L ++ S L + NL+ L L S
Sbjct: 492 ITESGIAELASGCPLLEELDLGWCPTLQSSTGCFARLARQLPNLQKLFLTANRS------ 545
Query: 243 IKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTL 283
+ D + + C++L + ++ G + ++ LR L
Sbjct: 546 ------VCDTDIEELASNCTRLRQLDILGTRMVSPASLRKL 580
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 238 LESLSIKNCGDLSDMSLVA--IGRGCSKLVKFEVEGCKNITVDGLRTLAS 285
L+ LS+ +C + D + A IG C KL ++ CKNIT G+ LAS
Sbjct: 453 LQHLSLGSCVMIEDYDVTASMIGAKCKKLRTLDLWRCKNITESGIAELAS 502
>sp|Q329T3|ASNA_SHIDS Aspartate--ammonia ligase OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=asnA PE=3 SV=1
Length = 330
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 28/105 (26%)
Query: 260 GCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQ 319
GC K V+ +V+ + + + +LA R+TL E L KAL+P DR+
Sbjct: 50 GCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGL--YTHMKALRPDEDRLS 107
Query: 320 KLH--------------------------IDCVWDGIRSSEAKAT 338
LH ++ +W GI+++EA +
Sbjct: 108 PLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVS 152
>sp|B7LK89|ASNA_ESCF3 Aspartate--ammonia ligase OS=Escherichia fergusonii (strain ATCC
35469 / DSM 13698 / CDC 0568-73) GN=asnA PE=3 SV=1
Length = 330
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 28/105 (26%)
Query: 260 GCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQ 319
GC K V+ +V+ + + + +LA R+TL E L KAL+P DR+
Sbjct: 50 GCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGL--YTHMKALRPDEDRLS 107
Query: 320 KLH--------------------------IDCVWDGIRSSEAKAT 338
LH ++ +W GI+++EA +
Sbjct: 108 PLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVS 152
>sp|P63623|ASNA_ECOL6 Aspartate--ammonia ligase OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=asnA PE=3 SV=1
Length = 330
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 28/105 (26%)
Query: 260 GCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQ 319
GC K V+ +V+ + + + +LA R+TL E L KAL+P DR+
Sbjct: 50 GCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGL--YTHMKALRPDEDRLS 107
Query: 320 KLH--------------------------IDCVWDGIRSSEAKAT 338
LH ++ +W GI+++EA +
Sbjct: 108 PLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVS 152
>sp|B5YY02|ASNA_ECO5E Aspartate--ammonia ligase OS=Escherichia coli O157:H7 (strain
EC4115 / EHEC) GN=asnA PE=3 SV=1
Length = 330
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 28/105 (26%)
Query: 260 GCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQ 319
GC K V+ +V+ + + + +LA R+TL E L KAL+P DR+
Sbjct: 50 GCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGL--YTHMKALRPDEDRLS 107
Query: 320 KLH--------------------------IDCVWDGIRSSEAKAT 338
LH ++ +W GI+++EA +
Sbjct: 108 PLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVS 152
>sp|P63624|ASNA_ECO57 Aspartate--ammonia ligase OS=Escherichia coli O157:H7 GN=asnA PE=3
SV=1
Length = 330
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 28/105 (26%)
Query: 260 GCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQ 319
GC K V+ +V+ + + + +LA R+TL E L KAL+P DR+
Sbjct: 50 GCEKAVQVKVKALPDAQFEVVHSLAKWKRQTLGQHDFSAGEGL--YTHMKALRPDEDRLS 107
Query: 320 KLH--------------------------IDCVWDGIRSSEAKAT 338
LH ++ +W GI+++EA +
Sbjct: 108 PLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVS 152
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 204,166,018
Number of Sequences: 539616
Number of extensions: 8473210
Number of successful extensions: 18494
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 18099
Number of HSP's gapped (non-prelim): 314
length of query: 554
length of database: 191,569,459
effective HSP length: 123
effective length of query: 431
effective length of database: 125,196,691
effective search space: 53959773821
effective search space used: 53959773821
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)