Query 039096
Match_columns 554
No_of_seqs 374 out of 3382
Neff 9.7
Searched_HMMs 13730
Date Mon Mar 25 10:11:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039096.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039096hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2astb2 c.10.1.3 (B:2136-2419) 99.9 1.4E-20 1E-24 180.8 21.3 220 149-431 44-265 (284)
2 d2astb2 c.10.1.3 (B:2136-2419) 99.8 2.9E-18 2.1E-22 164.4 19.3 194 196-430 46-242 (284)
3 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.6 3.1E-15 2.3E-19 152.8 21.5 372 5-426 4-440 (460)
4 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.6 7.6E-15 5.6E-19 149.8 22.3 380 67-525 15-440 (460)
5 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.5 5.1E-13 3.7E-17 131.1 17.5 260 23-330 29-316 (344)
6 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.4 2.7E-12 2E-16 125.8 17.8 43 75-118 27-69 (344)
7 d2omza2 c.10.2.1 (A:33-416) In 99.4 3.3E-12 2.4E-16 126.9 16.2 180 193-422 194-383 (384)
8 d2omza2 c.10.2.1 (A:33-416) In 99.4 1.8E-12 1.3E-16 128.8 13.2 174 221-440 194-377 (384)
9 d1xkua_ c.10.2.7 (A:) Decorin 99.0 1.2E-10 8.9E-15 111.7 7.4 105 261-386 170-280 (305)
10 d1xkua_ c.10.2.7 (A:) Decorin 99.0 1.5E-10 1.1E-14 111.1 7.3 218 151-427 31-257 (305)
11 d1ogqa_ c.10.2.8 (A:) Polygala 98.9 2.3E-11 1.7E-15 117.3 -3.0 36 348-386 241-276 (313)
12 d1ogqa_ c.10.2.8 (A:) Polygala 98.9 3E-11 2.2E-15 116.5 -2.7 199 192-427 72-283 (313)
13 d1h6ua2 c.10.2.1 (A:36-262) In 98.9 2.6E-09 1.9E-13 97.4 10.0 171 195-427 40-210 (227)
14 d1ozna_ c.10.2.7 (A:) Reticulo 98.8 2.8E-10 2E-14 107.9 1.2 14 480-493 221-234 (284)
15 d1ozna_ c.10.2.7 (A:) Reticulo 98.8 1.3E-09 9.3E-14 103.2 4.7 195 196-425 32-238 (284)
16 d1h6ta2 c.10.2.1 (A:31-240) In 98.7 1.1E-08 8.1E-13 91.9 9.4 163 196-420 46-208 (210)
17 d2omxa2 c.10.2.1 (A:37-235) In 98.7 9.6E-09 7E-13 91.4 8.8 13 261-273 83-95 (199)
18 d1h6ua2 c.10.2.1 (A:36-262) In 98.7 2.3E-08 1.7E-12 90.8 11.5 186 150-420 40-225 (227)
19 d1p9ag_ c.10.2.7 (G:) von Will 98.7 1.2E-08 8.4E-13 95.4 8.3 176 196-423 31-206 (266)
20 d2omxa2 c.10.2.1 (A:37-235) In 98.6 2.1E-08 1.5E-12 89.2 6.5 147 238-428 42-188 (199)
21 d1h6ta2 c.10.2.1 (A:31-240) In 98.5 6E-08 4.4E-12 86.9 7.9 158 237-440 47-204 (210)
22 d1pgva_ c.10.1.1 (A:) Tropomod 98.5 4.7E-07 3.4E-11 77.6 12.3 129 186-327 5-142 (167)
23 d1jl5a_ c.10.2.6 (A:) Leucine 98.5 2.4E-08 1.7E-12 96.9 3.9 92 6-120 41-132 (353)
24 d1p9ag_ c.10.2.7 (G:) von Will 98.5 1.1E-08 8E-13 95.6 1.1 156 237-427 32-187 (266)
25 d1jl5a_ c.10.2.6 (A:) Leucine 98.5 1.5E-07 1.1E-11 91.0 8.7 93 25-161 38-130 (353)
26 d1io0a_ c.10.1.1 (A:) Tropomod 98.4 1.4E-06 1E-10 74.5 13.3 128 186-327 7-143 (166)
27 d1a9na_ c.10.2.4 (A:) Spliceso 98.4 4.4E-08 3.2E-12 83.7 2.3 36 348-386 84-120 (162)
28 d1io0a_ c.10.1.1 (A:) Tropomod 98.3 5.3E-06 3.8E-10 70.7 13.5 124 144-300 10-143 (166)
29 d1xwdc1 c.10.2.7 (C:18-259) Fo 98.2 6.8E-09 4.9E-13 95.5 -6.6 18 194-211 76-93 (242)
30 d1dcea3 c.10.2.2 (A:444-567) R 98.2 1.4E-06 1E-10 70.4 7.2 104 77-229 18-122 (124)
31 d1a9na_ c.10.2.4 (A:) Spliceso 98.2 4.3E-07 3.1E-11 77.4 3.7 110 289-427 18-127 (162)
32 d1pgva_ c.10.1.1 (A:) Tropomod 98.1 7.7E-06 5.6E-10 69.7 11.1 13 261-273 130-142 (167)
33 d1m9la_ c.10.3.1 (A:) Outer ar 98.0 3.9E-07 2.8E-11 80.5 0.9 32 240-273 119-151 (198)
34 d1xwdc1 c.10.2.7 (C:18-259) Fo 98.0 3.5E-07 2.6E-11 83.6 0.5 35 196-234 29-63 (242)
35 d1dcea3 c.10.2.2 (A:444-567) R 98.0 2.6E-06 1.9E-10 68.8 5.7 101 6-120 1-102 (124)
36 d1m9la_ c.10.3.1 (A:) Outer ar 97.8 5.7E-07 4.2E-11 79.3 -2.2 13 261-273 69-81 (198)
37 d1w8aa_ c.10.2.7 (A:) Slit {Fr 97.7 1.7E-05 1.2E-09 69.2 5.6 36 348-386 75-110 (192)
38 d1w8aa_ c.10.2.7 (A:) Slit {Fr 97.5 7.5E-05 5.4E-09 64.9 6.9 92 316-431 29-121 (192)
39 d2ifga3 c.10.2.7 (A:36-191) Hi 96.3 0.0037 2.7E-07 51.7 7.1 36 348-386 53-88 (156)
40 d1koha1 c.10.2.3 (A:201-362) m 96.2 0.0012 8.5E-08 55.2 3.2 69 189-273 58-126 (162)
41 d2ifga3 c.10.2.7 (A:36-191) Hi 96.1 0.006 4.3E-07 50.3 7.3 69 348-428 28-96 (156)
42 d1koha1 c.10.2.3 (A:201-362) m 96.0 0.0017 1.3E-07 54.2 3.3 46 71-121 83-128 (162)
No 1
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.85 E-value=1.4e-20 Score=180.77 Aligned_cols=220 Identities=18% Similarity=0.231 Sum_probs=175.8
Q ss_pred cCCCCCEEEecccccccccCCCCCCCCCccccCCCCHHHHHHHHhCCCCCcEEEecCCCCCCCchhhHHHHHhcCCCCcE
Q 039096 149 NCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKG 228 (554)
Q Consensus 149 ~~~~L~~L~l~~c~~l~~~~~~~~~~g~~~~~~~i~~~~l~~l~~~~~~L~~L~L~~c~~l~~~~~~l~~l~~~~~~L~~ 228 (554)
...+|++|++++| .+++..+..+...|++|++|++++|. +++.. +..+ ..+++|+
T Consensus 44 ~~~~L~~LdLs~~--------------------~i~~~~l~~l~~~c~~L~~L~L~~~~-l~~~~--~~~l-~~~~~L~- 98 (284)
T d2astb2 44 SPFRVQHMDLSNS--------------------VIEVSTLHGILSQCSKLQNLSLEGLR-LSDPI--VNTL-AKNSNLV- 98 (284)
T ss_dssp CCBCCCEEECTTC--------------------EECHHHHHHHHTTBCCCSEEECTTCB-CCHHH--HHHH-TTCTTCS-
T ss_pred cCCCCCEEECCCC--------------------ccCHHHHHHHHHhCCCcccccccccC-CCcHH--HHHH-hcCCCCc-
Confidence 3568999999874 46788888889999999999999985 76655 5577 5677666
Q ss_pred eecccccCcccEEEecCCCCCCHHHHHHHHhcCCCCcEEEecCCCCCCHHHHHHHHHHhcCCccEEEEeccCCCChhHHH
Q 039096 229 LKLGQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASC 308 (554)
Q Consensus 229 L~l~~~~~~L~~L~l~~~~~l~~~~l~~l~~~~~~L~~L~L~~c~~i~~~~~~~l~~~~~~~L~~L~l~~c~~~~~~~~l 308 (554)
+|++++|..+++.++..++.+|++|++|++++|..+++.++........++|+.|++++|....+..++
T Consensus 99 -----------~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l 167 (284)
T d2astb2 99 -----------RLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDL 167 (284)
T ss_dssp -----------EEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHH
T ss_pred -----------CccccccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhcccccccccccc
Confidence 566777777999999999988999999999999999999987766554479999999998543356678
Q ss_pred HHHhhcCCCccEEEee-eeeccccchhhhccCCccchhhhhcCCCCceEEeecccCCccCccccccCcCCCCCCEEEEee
Q 039096 309 KALKPIRDRIQKLHID-CVWDGIRSSEAKATGNTSTIFSKTRWKSLKELSFWIEVGELLTPLPVAGLDECPILENIRIKM 387 (554)
Q Consensus 309 ~~l~~~~~~L~~L~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~~ 387 (554)
..+...||+|++|+++ |..+++..+..+ ..+++|++|++++|.. +++.....+..+|+|+.|++.
T Consensus 168 ~~l~~~~~~L~~L~L~~~~~itd~~~~~l-----------~~~~~L~~L~L~~C~~--i~~~~l~~L~~~~~L~~L~l~- 233 (284)
T d2astb2 168 STLVRRCPNLVHLDLSDSVMLKNDCFQEF-----------FQLNYLQHLSLSRCYD--IIPETLLELGEIPTLKTLQVF- 233 (284)
T ss_dssp HHHHHHCTTCSEEECTTCTTCCGGGGGGG-----------GGCTTCCEEECTTCTT--CCGGGGGGGGGCTTCCEEECT-
T ss_pred cccccccccccccccccccCCCchhhhhh-----------cccCcCCEEECCCCCC--CChHHHHHHhcCCCCCEEeee-
Confidence 8888889999999995 556777777777 6899999999999987 777777778889999999997
Q ss_pred eCCCCCCCCCCccccchhhhhcc-CCCccceeeecCCcccccccc
Q 039096 388 EGDTREKPLLRDDKAWGLSCLTR-YPRLSKLVLDFGDTDGHNQAA 431 (554)
Q Consensus 388 ~~~c~~~~~l~~~~~~~l~~l~~-~~~L~~L~l~c~~~~~~~~~~ 431 (554)
+| ++ +.++..+.+ +|+|+ +.|+.+++.+...
T Consensus 234 --~~-----~~---d~~l~~l~~~lp~L~---i~~~~ls~~~~~~ 265 (284)
T d2astb2 234 --GI-----VP---DGTLQLLKEALPHLQ---INCSHFTTIARPT 265 (284)
T ss_dssp --TS-----SC---TTCHHHHHHHSTTSE---ESCCCSCCTTCSS
T ss_pred --CC-----CC---HHHHHHHHHhCcccc---ccCccCCCCCCCc
Confidence 55 34 666777665 77654 5777777655444
No 2
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=2.9e-18 Score=164.35 Aligned_cols=194 Identities=18% Similarity=0.178 Sum_probs=154.1
Q ss_pred CCCcEEEecCCCCCCCchhhHHHHHhcCCCCcEeecccccCcccEEEecCCCCCCHHHHHHHHhcCCCCcEEEecCCCCC
Q 039096 196 PLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNI 275 (554)
Q Consensus 196 ~~L~~L~L~~c~~l~~~~~~l~~l~~~~~~L~~L~l~~~~~~L~~L~l~~~~~l~~~~l~~l~~~~~~L~~L~L~~c~~i 275 (554)
.+|++|++++|. +++.. +..+...|++|+ +|++++|. +++..+..++. +++|++|++++|..+
T Consensus 46 ~~L~~LdLs~~~-i~~~~--l~~l~~~c~~L~------------~L~L~~~~-l~~~~~~~l~~-~~~L~~L~Ls~c~~i 108 (284)
T d2astb2 46 FRVQHMDLSNSV-IEVST--LHGILSQCSKLQ------------NLSLEGLR-LSDPIVNTLAK-NSNLVRLNLSGCSGF 108 (284)
T ss_dssp BCCCEEECTTCE-ECHHH--HHHHHTTBCCCS------------EEECTTCB-CCHHHHHHHTT-CTTCSEEECTTCBSC
T ss_pred CCCCEEECCCCc-cCHHH--HHHHHHhCCCcc------------cccccccC-CCcHHHHHHhc-CCCCcCccccccccc
Confidence 478888998864 65443 556667788777 56666675 88888888876 899999999999999
Q ss_pred CHHHHHHHHHHhcCCccEEEEeccCCCChhHHHHHHhhcCCCccEEEeeee--eccccchhhhccCCccchhhhhcCCCC
Q 039096 276 TVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQKLHIDCV--WDGIRSSEAKATGNTSTIFSKTRWKSL 353 (554)
Q Consensus 276 ~~~~~~~l~~~~~~~L~~L~l~~c~~~~~~~~l~~l~~~~~~L~~L~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~L 353 (554)
++.++..+...+ ++|++|++++|..+++......+...++.|+.|+++.+ .+++.+...+ ..++++|
T Consensus 109 td~~l~~l~~~~-~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l----------~~~~~~L 177 (284)
T d2astb2 109 SEFALQTLLSSC-SRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTL----------VRRCPNL 177 (284)
T ss_dssp CHHHHHHHHHHC-TTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHH----------HHHCTTC
T ss_pred cccccchhhHHH-Hhccccccccccccccccchhhhcccccccchhhhccccccccccccccc----------ccccccc
Confidence 999999999888 99999999999988544333345566789999999543 4455555544 3789999
Q ss_pred ceEEeecccCCccCccccccCcCCCCCCEEEEeeeCCCCCCCCCCccccchhhhhccCCCccceeee-cCCccccccc
Q 039096 354 KELSFWIEVGELLTPLPVAGLDECPILENIRIKMEGDTREKPLLRDDKAWGLSCLTRYPRLSKLVLD-FGDTDGHNQA 430 (554)
Q Consensus 354 ~~L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~~~~~c~~~~~l~~~~~~~l~~l~~~~~L~~L~l~-c~~~~~~~~~ 430 (554)
++|++++|.. +++.....+..|++|++|+++ +| ..++ +.++..++++|+|+.|+++ | +++.++.
T Consensus 178 ~~L~L~~~~~--itd~~~~~l~~~~~L~~L~L~---~C---~~i~---~~~l~~L~~~~~L~~L~l~~~--~~d~~l~ 242 (284)
T d2astb2 178 VHLDLSDSVM--LKNDCFQEFFQLNYLQHLSLS---RC---YDII---PETLLELGEIPTLKTLQVFGI--VPDGTLQ 242 (284)
T ss_dssp SEEECTTCTT--CCGGGGGGGGGCTTCCEEECT---TC---TTCC---GGGGGGGGGCTTCCEEECTTS--SCTTCHH
T ss_pred cccccccccC--CCchhhhhhcccCcCCEEECC---CC---CCCC---hHHHHHHhcCCCCCEEeeeCC--CCHHHHH
Confidence 9999998887 777777778889999999999 88 7888 8888899999999999998 6 5554443
No 3
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=3.1e-15 Score=152.76 Aligned_cols=372 Identities=16% Similarity=0.078 Sum_probs=226.8
Q ss_pred eeEEEEecCC---CchhchhhcCCCCcEEeccCCccccccccc--CCCccCCCcccceeecccccccCcccHHHHHhc--
Q 039096 5 RTSITLRGNA---CNLNIVPLCFDAVTNLQLSNISPWGHSLLF--SPSSSSMDPRLLADLLQMSFLCFGAEFVPLLKH-- 77 (554)
Q Consensus 5 r~~L~l~~~~---~~l~~l~~~~~~L~~L~Ls~~~~~~~~~~~--~~~~~~~~~~L~~l~l~~~~~~~~~~l~~~~~~-- 77 (554)
-+.|+|+.+. ..+.++...+++++.|+|++| .++..... ...+. ..++|+.|+++++ .+++.++..+...
T Consensus 4 l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~-~i~~~~~~~l~~~L~-~~~~L~~LdLs~N-~i~~~~~~~l~~~l~ 80 (460)
T d1z7xw1 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDC-GLTEARCKDISSALR-VNPALAELNLRSN-ELGDVGVHCVLQGLQ 80 (460)
T ss_dssp EEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESS-CCCHHHHHHHHHHHH-TCTTCCEEECTTC-CCHHHHHHHHHHTTC
T ss_pred CCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCC-CCCHHHHHHHHHHHh-cCCCCCEEECcCC-cCChHHHHHHHHHHh
Confidence 3678997664 224666778999999999999 45543220 01122 6788999999843 2333444444332
Q ss_pred --CCCCcEEEecCCCCCCCChhHHHhhcCcCCCCccEEEcCCCCCCCCCCHHHHHHHHHhCCChHh--------------
Q 039096 78 --CKCLTSVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSFSEDYRPQEIIEIIAARPNLNK-------------- 141 (554)
Q Consensus 78 --~~~L~~L~L~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~i~~~~l~~l~~~~~~L~~-------------- 141 (554)
..+|++|+|++|. +++.....+......+++|++|++++|. +++.++..+.........
T Consensus 81 ~~~~~L~~L~L~~n~-it~~~~~~l~~~l~~~~~L~~L~L~~N~----i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 155 (460)
T d1z7xw1 81 TPSCKIQKLSLQNCC-LTGAGCGVLSSTLRTLPTLQELHLSDNL----LGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSA 155 (460)
T ss_dssp STTCCCCEEECTTSC-CBGGGHHHHHHHTTSCTTCCEEECCSSB----CHHHHHHHHHHHHTSTTCCCCEEECTTSCCBG
T ss_pred cCCCCCCEEECCCCC-ccccccccccchhhcccccccccccccc----chhhhhhhhhhcccccccccccccccccccch
Confidence 4589999999984 5554333344433456799999999987 777777666433211110
Q ss_pred --hH--HHHhccCCCCCEEEecccccccccCCCCCCCCCccccCCCCHHHHHHH----HhCCCCCcEEEecCCCCCCCch
Q 039096 142 --WA--VSIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARISEEGLIQL----FSGLPLLEELALDVGKNVRDSG 213 (554)
Q Consensus 142 --L~--~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~g~~~~~~~i~~~~l~~l----~~~~~~L~~L~L~~c~~l~~~~ 213 (554)
.. .......+.++.+.++++ .+.+.++... ...-...+.+++..+. +...+
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~ls~~--------------------~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~-~~~~~ 214 (460)
T d1z7xw1 156 ASCEPLASVLRAKPDFKELTVSNN--------------------DINEAGVRVLCQGLKDSPCQLEALKLESCG-VTSDN 214 (460)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSS--------------------BCHHHHHHHHHHHHHHSCCCCCEEECTTSC-CBTTH
T ss_pred hhhccccccccccccccccccccc--------------------cccccccccccccccccccccccccccccc-ccchh
Confidence 00 222234567888888653 2233333222 2233456677777754 33322
Q ss_pred -hhHHHHHhcCCCCcEeecccccC-----------------cccEEEecCCCCCCHHHHHHH---HhcCCCCcEEEecCC
Q 039096 214 -SASEALKSKCVNLKGLKLGQLHS-----------------WLESLSIKNCGDLSDMSLVAI---GRGCSKLVKFEVEGC 272 (554)
Q Consensus 214 -~~l~~l~~~~~~L~~L~l~~~~~-----------------~L~~L~l~~~~~l~~~~l~~l---~~~~~~L~~L~L~~c 272 (554)
..........+.++.+.+..+.. .++.+++++|. +.......+ ....+.++.+++++|
T Consensus 215 ~~~~~~~l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~-i~~~~~~~~~~~l~~~~~l~~l~l~~n 293 (460)
T d1z7xw1 215 CRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECG-ITAKGCGDLCRVLRAKESLKELSLAGN 293 (460)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC-CCHHHHHHHHHHHHHCTTCCEEECTTC
T ss_pred hhcccccccccccccccchhhccccccccchhhccccccccccccccccccc-ccccccccccccccccccccccccccc
Confidence 11222225677888888765431 78888888887 666554333 234788999999888
Q ss_pred CCCCHHHHHHHHHHhc---CCccEEEEeccCCCChh-HHHHHHhhcCCCccEEEeeeeeccccchhhhccCCccchhhhh
Q 039096 273 KNITVDGLRTLASLLR---ETLVVIKIYCCENLGAV-ASCKALKPIRDRIQKLHIDCVWDGIRSSEAKATGNTSTIFSKT 348 (554)
Q Consensus 273 ~~i~~~~~~~l~~~~~---~~L~~L~l~~c~~~~~~-~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (554)
. +++.++..+...+. ..|+.+.+.+|...... ..+..+...+++|++|+++.+.+++++...++ .....
T Consensus 294 ~-i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~------~~l~~ 366 (460)
T d1z7xw1 294 E-LGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELC------QGLGQ 366 (460)
T ss_dssp C-CHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHH------HHHTS
T ss_pred c-ccccccchhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhh------hhhhc
Confidence 7 78888887765431 47888888887533111 22334445677899999987777766655441 01123
Q ss_pred cCCCCceEEeecccCCccCccccc----cCcCCCCCCEEEEeeeCCCCCCCCCCccccchhhhhcc-----CCCccceee
Q 039096 349 RWKSLKELSFWIEVGELLTPLPVA----GLDECPILENIRIKMEGDTREKPLLRDDKAWGLSCLTR-----YPRLSKLVL 419 (554)
Q Consensus 349 ~~~~L~~L~l~~c~~~~~t~l~~~----~l~~~~~L~~L~l~~~~~c~~~~~l~~~~~~~l~~l~~-----~~~L~~L~l 419 (554)
..+.|++|++++|. +++.... .+..+++|++|+++ + +.++ +.|+..+.+ ...|+.|++
T Consensus 367 ~~~~L~~L~Ls~n~---i~~~~~~~l~~~l~~~~~L~~L~Ls---~----N~i~---~~g~~~l~~~l~~~~~~L~~l~l 433 (460)
T d1z7xw1 367 PGSVLRVLWLADCD---VSDSSCSSLAATLLANHSLRELDLS---N----NCLG---DAGILQLVESVRQPGCLLEQLVL 433 (460)
T ss_dssp TTCCCCEEECTTSC---CCHHHHHHHHHHHHHCCCCCEEECC---S----SSCC---HHHHHHHHHHHTSTTCCCCEEEC
T ss_pred ccCCCCEEECCCCC---CChHHHHHHHHHHhcCCCCCEEECC---C----CcCC---HHHHHHHHHHHHhCCCccCEEEC
Confidence 46678889888775 6553322 23667889988886 3 3566 666665543 346888888
Q ss_pred ecCCccc
Q 039096 420 DFGDTDG 426 (554)
Q Consensus 420 ~c~~~~~ 426 (554)
..+.+..
T Consensus 434 ~~~~~~~ 440 (460)
T d1z7xw1 434 YDIYWSE 440 (460)
T ss_dssp TTCCCCH
T ss_pred CCCCCCH
Confidence 7554443
No 4
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=7.6e-15 Score=149.80 Aligned_cols=380 Identities=18% Similarity=0.118 Sum_probs=177.9
Q ss_pred CcccHHHHHhcCCCCcEEEecCCCCCCCChhHHHhhcCcCCCCccEEEcCCCCCCCCCCHHHHHHHHHhCCChHhhHHHH
Q 039096 67 FGAEFVPLLKHCKCLTSVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSFSEDYRPQEIIEIIAARPNLNKWAVSI 146 (554)
Q Consensus 67 ~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~i~~~~l~~l~~~~~~L~~L~~~~ 146 (554)
++..+..++..++++++|+|++| .+++.....+......+++|++|+|++|. +++.++..+...+
T Consensus 15 ~~~~~~~l~~~l~~l~~L~L~~~-~i~~~~~~~l~~~L~~~~~L~~LdLs~N~----i~~~~~~~l~~~l---------- 79 (460)
T d1z7xw1 15 SDARWAELLPLLQQCQVVRLDDC-GLTEARCKDISSALRVNPALAELNLRSNE----LGDVGVHCVLQGL---------- 79 (460)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESS-CCCHHHHHHHHHHHHTCTTCCEEECTTCC----CHHHHHHHHHHTT----------
T ss_pred ChHHHHHHHHhCCCCCEEEeCCC-CCCHHHHHHHHHHHhcCCCCCEEECcCCc----CChHHHHHHHHHH----------
Confidence 45566666777777777777777 34432222222222334577777777765 6666666553322
Q ss_pred hccCCCCCEEEecccccccccCCCCCCCCCccccCCCCHHHHHH---HHhCCCCCcEEEecCCCCCCCchhhHHHHHhcC
Q 039096 147 ATNCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARISEEGLIQ---LFSGLPLLEELALDVGKNVRDSGSASEALKSKC 223 (554)
Q Consensus 147 ~~~~~~L~~L~l~~c~~l~~~~~~~~~~g~~~~~~~i~~~~l~~---l~~~~~~L~~L~L~~c~~l~~~~~~l~~l~~~~ 223 (554)
.....+|++|++++| .+++.+... ....+++|++|+++++. +++.+ ...+....
T Consensus 80 ~~~~~~L~~L~L~~n--------------------~it~~~~~~l~~~l~~~~~L~~L~L~~N~-i~~~~--~~~l~~~l 136 (460)
T d1z7xw1 80 QTPSCKIQKLSLQNC--------------------CLTGAGCGVLSSTLRTLPTLQELHLSDNL-LGDAG--LQLLCEGL 136 (460)
T ss_dssp CSTTCCCCEEECTTS--------------------CCBGGGHHHHHHHTTSCTTCCEEECCSSB-CHHHH--HHHHHHHH
T ss_pred hcCCCCCCEEECCCC--------------------Cccccccccccchhhcccccccccccccc-chhhh--hhhhhhcc
Confidence 112346777777654 234333322 23456677777776643 55443 22222111
Q ss_pred ----CCCcEeeccccc----------------CcccEEEecCCCCCCHHHHHHHH----hcCCCCcEEEecCCCCCCHHH
Q 039096 224 ----VNLKGLKLGQLH----------------SWLESLSIKNCGDLSDMSLVAIG----RGCSKLVKFEVEGCKNITVDG 279 (554)
Q Consensus 224 ----~~L~~L~l~~~~----------------~~L~~L~l~~~~~l~~~~l~~l~----~~~~~L~~L~L~~c~~i~~~~ 279 (554)
............ ..++.+.++++. +.+.+...+. ..-.....+++.++. +...+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ls~~~-~~~~~~~~~~~~l~~~~~~~~~l~~~~~~-~~~~~ 214 (460)
T d1z7xw1 137 LDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNND-INEAGVRVLCQGLKDSPCQLEALKLESCG-VTSDN 214 (460)
T ss_dssp TSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSB-CHHHHHHHHHHHHHHSCCCCCEEECTTSC-CBTTH
T ss_pred cccccccccccccccccchhhhcccccccccccccccccccccc-ccccccccccccccccccccccccccccc-ccchh
Confidence 111222221110 055666666655 4444333222 222345566666665 23222
Q ss_pred HHHH---HHHhcCCccEEEEeccCCCChh---HHHHHHhhcCCCccEEEeeeeeccccchhhhccCCccchhhhhcCCCC
Q 039096 280 LRTL---ASLLRETLVVIKIYCCENLGAV---ASCKALKPIRDRIQKLHIDCVWDGIRSSEAKATGNTSTIFSKTRWKSL 353 (554)
Q Consensus 280 ~~~l---~~~~~~~L~~L~l~~c~~~~~~---~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 353 (554)
.... .... +.++.+.+.++... .. ............++.++++.+.+......... ......+.+
T Consensus 215 ~~~~~~~l~~~-~~~~~l~~~~n~~~-~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~-------~~l~~~~~l 285 (460)
T d1z7xw1 215 CRDLCGIVASK-ASLRELALGSNKLG-DVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC-------RVLRAKESL 285 (460)
T ss_dssp HHHHHHHHHHC-TTCCEEECCSSBCH-HHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH-------HHHHHCTTC
T ss_pred hhccccccccc-ccccccchhhcccc-ccccchhhccccccccccccccccccccccccccccc-------ccccccccc
Confidence 2222 2222 56677776665432 11 11222233345677777754433322222110 112456667
Q ss_pred ceEEeecccCCccCccccccC-----cCCCCCCEEEEeeeCCCCCCCCCCccccchhhhhcc----CCCccceeeecCCc
Q 039096 354 KELSFWIEVGELLTPLPVAGL-----DECPILENIRIKMEGDTREKPLLRDDKAWGLSCLTR----YPRLSKLVLDFGDT 424 (554)
Q Consensus 354 ~~L~l~~c~~~~~t~l~~~~l-----~~~~~L~~L~l~~~~~c~~~~~l~~~~~~~l~~l~~----~~~L~~L~l~c~~~ 424 (554)
+.+++++++ +++.....+ ...+.|+.+.+. +| .++ +.++..+++ .++|+.|+|+.+.+
T Consensus 286 ~~l~l~~n~---i~~~~~~~l~~~l~~~~~~L~~l~l~---~~----~l~---~~~~~~l~~~~~~~~~L~~L~Ls~N~i 352 (460)
T d1z7xw1 286 KELSLAGNE---LGDEGARLLCETLLEPGCQLESLWVK---SC----SFT---AACCSHFSSVLAQNRFLLELQISNNRL 352 (460)
T ss_dssp CEEECTTCC---CHHHHHHHHHHHHTSTTCCCCEEECT---TS----CCB---GGGHHHHHHHHHHCSSCCEEECCSSBC
T ss_pred ccccccccc---ccccccchhhcccccccccccccccc---cc----chh---hhhhhhcccccccccchhhhheeeecc
Confidence 777665443 322211111 234567777775 44 233 333333332 56677777776666
Q ss_pred ccccccccccCCCCchhhhHhhcccccceecccccCCCCCcCCcchh-hhhHHHHHHHhccccceeeeccch--hhHHHH
Q 039096 425 DGHNQAAPYKAADLSTWDRFVLNGIGNLILKELDYWPAKDPNASQRS-LSRLAAALISNCITLRKVFVHCTA--REHFMS 501 (554)
Q Consensus 425 ~~~~~~~~~~~~~L~~l~~~~l~~~~~l~L~~l~~~~~~~~~~~~~~-~~lp~~~~l~~~~~L~~L~i~~~~--~~~~~~ 501 (554)
++.++..+.. ....... .|+.+..... .+.... ..++.. +..+++|++|++++.. ++....
T Consensus 353 ~~~g~~~l~~---------~l~~~~~--~L~~L~Ls~n---~i~~~~~~~l~~~--l~~~~~L~~L~Ls~N~i~~~g~~~ 416 (460)
T d1z7xw1 353 EDAGVRELCQ---------GLGQPGS--VLRVLWLADC---DVSDSSCSSLAAT--LLANHSLRELDLSNNCLGDAGILQ 416 (460)
T ss_dssp HHHHHHHHHH---------HHTSTTC--CCCEEECTTS---CCCHHHHHHHHHH--HHHCCCCCEEECCSSSCCHHHHHH
T ss_pred cCcccchhhh---------hhhcccC--CCCEEECCCC---CCChHHHHHHHHH--HhcCCCCCEEECCCCcCCHHHHHH
Confidence 6544332100 0000001 1222222221 111111 122333 7788899999998443 333333
Q ss_pred hhhcCCC-CCcccccccccccCCCC
Q 039096 502 MLISPTP-NPKKARDAQIKLDYYPP 525 (554)
Q Consensus 502 ~~~~~~~-~~~~L~~l~l~~~~~~~ 525 (554)
+... +. +.++|+.|++.++.++.
T Consensus 417 l~~~-l~~~~~~L~~l~l~~~~~~~ 440 (460)
T d1z7xw1 417 LVES-VRQPGCLLEQLVLYDIYWSE 440 (460)
T ss_dssp HHHH-HTSTTCCCCEEECTTCCCCH
T ss_pred HHHH-HHhCCCccCEEECCCCCCCH
Confidence 3222 11 12348889988877654
No 5
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.46 E-value=5.1e-13 Score=131.10 Aligned_cols=260 Identities=18% Similarity=0.225 Sum_probs=147.0
Q ss_pred cCCCCcEEeccCCccccccccc--CCCccCCCcccceeecccccc--cC---cc---cHHHHHhcCCCCcEEEecCCCCC
Q 039096 23 CFDAVTNLQLSNISPWGHSLLF--SPSSSSMDPRLLADLLQMSFL--CF---GA---EFVPLLKHCKCLTSVDLSSFYHW 92 (554)
Q Consensus 23 ~~~~L~~L~Ls~~~~~~~~~~~--~~~~~~~~~~L~~l~l~~~~~--~~---~~---~l~~~~~~~~~L~~L~L~~~~~~ 92 (554)
....|+.|+|+++ .++..... ...+. ..++|+.+.+..... .. .. .+...+..+++|++|+|++|. +
T Consensus 29 ~~~~l~~L~Ls~n-~i~~~~~~~l~~~l~-~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~-i 105 (344)
T d2ca6a1 29 EDDSVKEIVLSGN-TIGTEAARWLSENIA-SKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA-F 105 (344)
T ss_dssp HCSCCCEEECTTS-EECHHHHHHHHHTTT-TCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC-C
T ss_pred hCCCCCEEECcCC-cCCHHHHHHHHHHHH-hCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccc-c
Confidence 5788999999987 45443220 02222 566777777764321 01 11 123335667888888888773 3
Q ss_pred CCChhHHHhhcCcCCCCccEEEcCCCCCCCCCCHHHHHHHHHhCCChHhhH-HHHhccCCCCCEEEecccccccccCCCC
Q 039096 93 TEDLPPVLKAYPDKSAILTCLNLLKTSFSEDYRPQEIIEIIAARPNLNKWA-VSIATNCPRLTLLHLAETSTLAAMRGDP 171 (554)
Q Consensus 93 ~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~i~~~~l~~l~~~~~~L~~L~-~~~~~~~~~L~~L~l~~c~~l~~~~~~~ 171 (554)
.......+......+++|++|++++|. +++.+...+... +..+. .......+.|+.+.++++
T Consensus 106 ~~~~~~~l~~~l~~~~~L~~L~l~~n~----l~~~~~~~l~~~---l~~~~~~~~~~~~~~L~~l~l~~n---------- 168 (344)
T d2ca6a1 106 GPTAQEPLIDFLSKHTPLEHLYLHNNG----LGPQAGAKIARA---LQELAVNKKAKNAPPLRSIICGRN---------- 168 (344)
T ss_dssp CTTTHHHHHHHHHHCTTCCEEECCSSC----CHHHHHHHHHHH---HHHHHHHHHHHTCCCCCEEECCSS----------
T ss_pred ccccccchhhhhcccccchheeccccc----cccccccccccc---ccccccccccccCcccceeecccc----------
Confidence 333222233222234678888888776 666655555332 22222 222335677888887652
Q ss_pred CCCCCccccCCCCHHH---HHHHHhCCCCCcEEEecCCCCCCCchhhHHHHH---hcCCCCcEeecccccCcccEEEecC
Q 039096 172 DDDGFTAEDARISEEG---LIQLFSGLPLLEELALDVGKNVRDSGSASEALK---SKCVNLKGLKLGQLHSWLESLSIKN 245 (554)
Q Consensus 172 ~~~g~~~~~~~i~~~~---l~~l~~~~~~L~~L~L~~c~~l~~~~~~l~~l~---~~~~~L~~L~l~~~~~~L~~L~l~~ 245 (554)
.+++.+ +......++.|++|++++| .+++.+.. ..+. ..+++ |+.|++++
T Consensus 169 ----------~i~~~~~~~l~~~l~~~~~L~~L~L~~n-~i~~~g~~-~~l~~~l~~~~~------------L~~L~Ls~ 224 (344)
T d2ca6a1 169 ----------RLENGSMKEWAKTFQSHRLLHTVKMVQN-GIRPEGIE-HLLLEGLAYCQE------------LKVLDLQD 224 (344)
T ss_dssp ----------CCTGGGHHHHHHHHHHCTTCCEEECCSS-CCCHHHHH-HHHHTTGGGCTT------------CCEEECCS
T ss_pred ----------cccccccccccchhhhhhhhcccccccc-cccccccc-cchhhhhcchhh------------hccccccc
Confidence 333333 3333445678888888775 36655421 1121 23443 44566666
Q ss_pred CCCCCHHHHHHHH---hcCCCCcEEEecCCCCCCHHHHHHHHHHhc----CCccEEEEeccCCCChhHHHHHHh----hc
Q 039096 246 CGDLSDMSLVAIG---RGCSKLVKFEVEGCKNITVDGLRTLASLLR----ETLVVIKIYCCENLGAVASCKALK----PI 314 (554)
Q Consensus 246 ~~~l~~~~l~~l~---~~~~~L~~L~L~~c~~i~~~~~~~l~~~~~----~~L~~L~l~~c~~~~~~~~l~~l~----~~ 314 (554)
|. +++.+..+++ ..+++|++|++++|. +++.|+..++..+. +.|++|++++|. ++ ..++..+. ..
T Consensus 225 N~-i~~~g~~~L~~~l~~~~~L~~L~Ls~n~-i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~-i~-~~~~~~l~~~l~~~ 300 (344)
T d2ca6a1 225 NT-FTHLGSSALAIALKSWPNLRELGLNDCL-LSARGAAAVVDAFSKLENIGLQTLRLQYNE-IE-LDAVRTLKTVIDEK 300 (344)
T ss_dssp SC-CHHHHHHHHHHHGGGCTTCCEEECTTCC-CCHHHHHHHHHHHHTCSSCCCCEEECCSSC-CB-HHHHHHHHHHHHHH
T ss_pred cc-ccccccccccccccccccchhhhhhcCc-cCchhhHHHHHHhhhccCCCCCEEECCCCc-CC-hHHHHHHHHHHHcc
Confidence 65 6776655554 356788888888887 78888777765431 467888887765 42 22322222 24
Q ss_pred CCCccEEEeeeeeccc
Q 039096 315 RDRIQKLHIDCVWDGI 330 (554)
Q Consensus 315 ~~~L~~L~l~~~~~~~ 330 (554)
++.|++|+++++.+..
T Consensus 301 ~~~L~~L~l~~N~~~~ 316 (344)
T d2ca6a1 301 MPDLLFLELNGNRFSE 316 (344)
T ss_dssp CTTCCEEECTTSBSCT
T ss_pred CCCCCEEECCCCcCCC
Confidence 6677777776665433
No 6
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.40 E-value=2.7e-12 Score=125.81 Aligned_cols=43 Identities=12% Similarity=-0.008 Sum_probs=23.4
Q ss_pred HhcCCCCcEEEecCCCCCCCChhHHHhhcCcCCCCccEEEcCCC
Q 039096 75 LKHCKCLTSVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKT 118 (554)
Q Consensus 75 ~~~~~~L~~L~L~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 118 (554)
+.....|++|+|+++ .+.+.....+.......++|+.|+++++
T Consensus 27 L~~~~~l~~L~Ls~n-~i~~~~~~~l~~~l~~~~~L~~l~l~~~ 69 (344)
T d2ca6a1 27 LLEDDSVKEIVLSGN-TIGTEAARWLSENIASKKDLEIAEFSDI 69 (344)
T ss_dssp HHHCSCCCEEECTTS-EECHHHHHHHHHTTTTCTTCCEEECCSC
T ss_pred HhhCCCCCEEECcCC-cCCHHHHHHHHHHHHhCCCCCEEECCCC
Confidence 455666667776665 3333333344444444556666666654
No 7
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.37 E-value=3.3e-12 Score=126.94 Aligned_cols=180 Identities=17% Similarity=0.180 Sum_probs=121.2
Q ss_pred hCCCCCcEEEecCCCCCCCchhhHHHHHhcCCCCcEeecccccC----------cccEEEecCCCCCCHHHHHHHHhcCC
Q 039096 193 SGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHS----------WLESLSIKNCGDLSDMSLVAIGRGCS 262 (554)
Q Consensus 193 ~~~~~L~~L~L~~c~~l~~~~~~l~~l~~~~~~L~~L~l~~~~~----------~L~~L~l~~~~~l~~~~l~~l~~~~~ 262 (554)
..+++++.++++++ .+++..+ . ..+++|+.|++.++.- +|+.|++++|. +++.. .+ ..++
T Consensus 194 ~~l~~~~~l~l~~n-~i~~~~~----~-~~~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~-l~~~~--~~-~~~~ 263 (384)
T d2omza2 194 AKLTNLESLIATNN-QISDITP----L-GILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQ-ISNLA--PL-SGLT 263 (384)
T ss_dssp GGCTTCSEEECCSS-CCCCCGG----G-GGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSC-CCCCG--GG-TTCT
T ss_pred ccccccceeeccCC-ccCCCCc----c-cccCCCCEEECCCCCCCCcchhhcccccchhccccCc-cCCCC--cc-cccc
Confidence 35677777777664 3544322 2 4567777777765431 77788888886 55422 23 3489
Q ss_pred CCcEEEecCCCCCCHHHHHHHHHHhcCCccEEEEeccCCCChhHHHHHHhhcCCCccEEEeeeeeccccchhhhccCCcc
Q 039096 263 KLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQKLHIDCVWDGIRSSEAKATGNTS 342 (554)
Q Consensus 263 ~L~~L~L~~c~~i~~~~~~~l~~~~~~~L~~L~l~~c~~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~ 342 (554)
+|+.|+++++. ++. +..+ ..+ +.++.+.+..+... ... ....+++++.|+++.+.+... ..+
T Consensus 264 ~L~~L~l~~~~-l~~--~~~~-~~~-~~l~~l~~~~n~l~-~~~----~~~~~~~l~~L~ls~n~l~~l--~~l------ 325 (384)
T d2omza2 264 KLTELKLGANQ-ISN--ISPL-AGL-TALTNLELNENQLE-DIS----PISNLKNLTYLTLYFNNISDI--SPV------ 325 (384)
T ss_dssp TCSEEECCSSC-CCC--CGGG-TTC-TTCSEEECCSSCCS-CCG----GGGGCTTCSEEECCSSCCSCC--GGG------
T ss_pred cCCEeeccCcc-cCC--CCcc-ccc-cccccccccccccc-ccc----ccchhcccCeEECCCCCCCCC--ccc------
Confidence 99999999887 442 1122 223 78899998887543 221 134578899999987765432 234
Q ss_pred chhhhhcCCCCceEEeecccCCccCccccccCcCCCCCCEEEEeeeCCCCCCCCCCccccchhhhhccCCCccceeeecC
Q 039096 343 TIFSKTRWKSLKELSFWIEVGELLTPLPVAGLDECPILENIRIKMEGDTREKPLLRDDKAWGLSCLTRYPRLSKLVLDFG 422 (554)
Q Consensus 343 ~~~~~~~~~~L~~L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~~~~~c~~~~~l~~~~~~~l~~l~~~~~L~~L~l~c~ 422 (554)
..+++|++|++++|. +++++ .+..|++|++|+++ +| .++ + +..+.++++|+.|+|+.|
T Consensus 326 -----~~l~~L~~L~L~~n~---l~~l~--~l~~l~~L~~L~l~---~N----~l~---~--l~~l~~l~~L~~L~L~~N 383 (384)
T d2omza2 326 -----SSLTKLQRLFFANNK---VSDVS--SLANLTNINWLSAG---HN----QIS---D--LTPLANLTRITQLGLNDQ 383 (384)
T ss_dssp -----GGCTTCCEEECCSSC---CCCCG--GGGGCTTCCEEECC---SS----CCC---B--CGGGTTCTTCSEEECCCE
T ss_pred -----ccCCCCCEEECCCCC---CCCCh--hHcCCCCCCEEECC---CC----cCC---C--ChhhccCCCCCEeeCCCC
Confidence 678999999998875 77664 47889999999997 55 444 2 234777999999999743
No 8
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.35 E-value=1.8e-12 Score=128.80 Aligned_cols=174 Identities=14% Similarity=0.160 Sum_probs=123.6
Q ss_pred hcCCCCcEeeccccc----------CcccEEEecCCCCCCHHHHHHHHhcCCCCcEEEecCCCCCCHHHHHHHHHHhcCC
Q 039096 221 SKCVNLKGLKLGQLH----------SWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRET 290 (554)
Q Consensus 221 ~~~~~L~~L~l~~~~----------~~L~~L~l~~~~~l~~~~l~~l~~~~~~L~~L~L~~c~~i~~~~~~~l~~~~~~~ 290 (554)
..+++++.+.+.++. .+|+.|++++|. +++. ..+ ..+++|+.|++.+|. +++. ..+ ..+ ++
T Consensus 194 ~~l~~~~~l~l~~n~i~~~~~~~~~~~L~~L~l~~n~-l~~~--~~l-~~l~~L~~L~l~~n~-l~~~--~~~-~~~-~~ 264 (384)
T d2omza2 194 AKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQ-LKDI--GTL-ASLTNLTDLDLANNQ-ISNL--APL-SGL-TK 264 (384)
T ss_dssp GGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSC-CCCC--GGG-GGCTTCSEEECCSSC-CCCC--GGG-TTC-TT
T ss_pred ccccccceeeccCCccCCCCcccccCCCCEEECCCCC-CCCc--chh-hcccccchhccccCc-cCCC--Ccc-ccc-cc
Confidence 678999999987653 289999999997 6653 223 358999999999997 5532 122 233 89
Q ss_pred ccEEEEeccCCCChhHHHHHHhhcCCCccEEEeeeeeccccchhhhccCCccchhhhhcCCCCceEEeecccCCccCccc
Q 039096 291 LVVIKIYCCENLGAVASCKALKPIRDRIQKLHIDCVWDGIRSSEAKATGNTSTIFSKTRWKSLKELSFWIEVGELLTPLP 370 (554)
Q Consensus 291 L~~L~l~~c~~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~~~~t~l~ 370 (554)
|++|+++++... ...+ ...++.++.+.+..+.+.. ...+ ..+++++.|+++++. ++++.
T Consensus 265 L~~L~l~~~~l~-~~~~----~~~~~~l~~l~~~~n~l~~--~~~~-----------~~~~~l~~L~ls~n~---l~~l~ 323 (384)
T d2omza2 265 LTELKLGANQIS-NISP----LAGLTALTNLELNENQLED--ISPI-----------SNLKNLTYLTLYFNN---ISDIS 323 (384)
T ss_dssp CSEEECCSSCCC-CCGG----GTTCTTCSEEECCSSCCSC--CGGG-----------GGCTTCSEEECCSSC---CSCCG
T ss_pred CCEeeccCcccC-CCCc----ccccccccccccccccccc--cccc-----------chhcccCeEECCCCC---CCCCc
Confidence 999999887644 2222 2347789999997665432 2334 678999999998765 66654
Q ss_pred cccCcCCCCCCEEEEeeeCCCCCCCCCCccccchhhhhccCCCccceeeecCCcccccccccccCCCCch
Q 039096 371 VAGLDECPILENIRIKMEGDTREKPLLRDDKAWGLSCLTRYPRLSKLVLDFGDTDGHNQAAPYKAADLST 440 (554)
Q Consensus 371 ~~~l~~~~~L~~L~l~~~~~c~~~~~l~~~~~~~l~~l~~~~~L~~L~l~c~~~~~~~~~~~~~~~~L~~ 440 (554)
.+..+++|++|+++ +| .++ + +..+..+++|+.|++++|.+++... +..+++|..
T Consensus 324 --~l~~l~~L~~L~L~---~n----~l~---~--l~~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~ 377 (384)
T d2omza2 324 --PVSSLTKLQRLFFA---NN----KVS---D--VSSLANLTNINWLSAGHNQISDLTP--LANLTRITQ 377 (384)
T ss_dssp --GGGGCTTCCEEECC---SS----CCC---C--CGGGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSE
T ss_pred --ccccCCCCCEEECC---CC----CCC---C--ChhHcCCCCCCEEECCCCcCCCChh--hccCCCCCE
Confidence 36789999999998 66 333 1 2357789999999999888987643 334444443
No 9
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.03 E-value=1.2e-10 Score=111.66 Aligned_cols=105 Identities=10% Similarity=0.054 Sum_probs=53.3
Q ss_pred CCCCcEEEecCCCCCCHHHHHHHHHHhcCCccEEEEeccCCCChhHHHHHHhhcCCCccEEEeeeeeccccchhhhccCC
Q 039096 261 CSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQKLHIDCVWDGIRSSEAKATGN 340 (554)
Q Consensus 261 ~~~L~~L~L~~c~~i~~~~~~~l~~~~~~~L~~L~l~~c~~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 340 (554)
+++|+.|++.+|.. +...... ...+ +.++.|++++|... .... .....+++|++|+++.+.+... +..+
T Consensus 170 ~~~L~~L~l~~n~~-~~~~~~~-~~~~-~~l~~L~~s~n~l~-~~~~--~~~~~l~~L~~L~L~~N~L~~l-p~~l---- 238 (305)
T d1xkua_ 170 PPSLTELHLDGNKI-TKVDAAS-LKGL-NNLAKLGLSFNSIS-AVDN--GSLANTPHLRELHLNNNKLVKV-PGGL---- 238 (305)
T ss_dssp CTTCSEEECTTSCC-CEECTGG-GTTC-TTCCEEECCSSCCC-EECT--TTGGGSTTCCEEECCSSCCSSC-CTTT----
T ss_pred CCccCEEECCCCcC-CCCChhH-hhcc-cccccccccccccc-cccc--ccccccccceeeeccccccccc-cccc----
Confidence 45566666666542 2111111 1122 55666666665432 2111 1223466777777765544322 2233
Q ss_pred ccchhhhhcCCCCceEEeecccCCccCccccccC------cCCCCCCEEEEe
Q 039096 341 TSTIFSKTRWKSLKELSFWIEVGELLTPLPVAGL------DECPILENIRIK 386 (554)
Q Consensus 341 ~~~~~~~~~~~~L~~L~l~~c~~~~~t~l~~~~l------~~~~~L~~L~l~ 386 (554)
..+++|++|+++++. ++.+....+ ...++|+.|++.
T Consensus 239 -------~~l~~L~~L~Ls~N~---i~~i~~~~f~~~~~~~~~~~L~~L~L~ 280 (305)
T d1xkua_ 239 -------ADHKYIQVVYLHNNN---ISAIGSNDFCPPGYNTKKASYSGVSLF 280 (305)
T ss_dssp -------TTCSSCCEEECCSSC---CCCCCTTSSSCSSCCTTSCCCSEEECC
T ss_pred -------ccccCCCEEECCCCc---cCccChhhccCcchhcccCCCCEEECC
Confidence 567777777776654 555433222 345677777776
No 10
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.02 E-value=1.5e-10 Score=111.06 Aligned_cols=218 Identities=15% Similarity=0.180 Sum_probs=136.3
Q ss_pred CCCCEEEecccccccccCCCCCCCCCccccCCCCHHHHHHHHhCCCCCcEEEecCCCCCCCchhhHHHHHhcCCCCcEee
Q 039096 151 PRLTLLHLAETSTLAAMRGDPDDDGFTAEDARISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLK 230 (554)
Q Consensus 151 ~~L~~L~l~~c~~l~~~~~~~~~~g~~~~~~~i~~~~l~~l~~~~~~L~~L~L~~c~~l~~~~~~l~~l~~~~~~L~~L~ 230 (554)
+++++|++++|. ++ .+... .+.++++|++|+++++. +....+. .+ .++++|+.|+
T Consensus 31 ~~l~~L~Ls~N~-i~----------------~l~~~----~f~~l~~L~~L~l~~n~-~~~i~~~--~f-~~l~~L~~L~ 85 (305)
T d1xkua_ 31 PDTALLDLQNNK-IT----------------EIKDG----DFKNLKNLHTLILINNK-ISKISPG--AF-APLVKLERLY 85 (305)
T ss_dssp TTCCEEECCSSC-CC----------------CBCTT----TTTTCTTCCEEECCSSC-CCCBCTT--TT-TTCTTCCEEE
T ss_pred CCCCEEECcCCc-CC----------------CcChh----Hhhcccccccccccccc-ccccchh--hh-hCCCccCEec
Confidence 679999998751 11 11111 13478999999999865 5544322 45 7899999999
Q ss_pred ccccc---------CcccEEEecCCCCCCHHHHHHHHhcCCCCcEEEecCCCCCCHHHHHHHHHHhcCCccEEEEeccCC
Q 039096 231 LGQLH---------SWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCEN 301 (554)
Q Consensus 231 l~~~~---------~~L~~L~l~~~~~l~~~~l~~l~~~~~~L~~L~L~~c~~i~~~~~~~l~~~~~~~L~~L~l~~c~~ 301 (554)
+.++. ..++.|.+.++. +.......+ .....+..++...+..............+ ++|+.+++.+|..
T Consensus 86 l~~n~l~~l~~~~~~~l~~L~~~~n~-l~~l~~~~~-~~~~~~~~l~~~~n~~~~~~~~~~~~~~l-~~L~~l~l~~n~l 162 (305)
T d1xkua_ 86 LSKNQLKELPEKMPKTLQELRVHENE-ITKVRKSVF-NGLNQMIVVELGTNPLKSSGIENGAFQGM-KKLSYIRIADTNI 162 (305)
T ss_dssp CCSSCCSBCCSSCCTTCCEEECCSSC-CCBBCHHHH-TTCTTCCEEECCSSCCCGGGBCTTGGGGC-TTCCEEECCSSCC
T ss_pred ccCCccCcCccchhhhhhhhhccccc-hhhhhhhhh-hccccccccccccccccccCCCccccccc-cccCccccccCCc
Confidence 98753 167788877775 443322233 33667777877766532111111112223 6788888877754
Q ss_pred CChhHHHHHHhhcCCCccEEEeeeeeccccchhhhccCCccchhhhhcCCCCceEEeecccCCccCccccccCcCCCCCC
Q 039096 302 LGAVASCKALKPIRDRIQKLHIDCVWDGIRSSEAKATGNTSTIFSKTRWKSLKELSFWIEVGELLTPLPVAGLDECPILE 381 (554)
Q Consensus 302 ~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~~~~t~l~~~~l~~~~~L~ 381 (554)
.... ...+++|++|+++.+.........+ ..++.+++|+++++. ++.+....+..+++|+
T Consensus 163 ~~l~------~~~~~~L~~L~l~~n~~~~~~~~~~-----------~~~~~l~~L~~s~n~---l~~~~~~~~~~l~~L~ 222 (305)
T d1xkua_ 163 TTIP------QGLPPSLTELHLDGNKITKVDAASL-----------KGLNNLAKLGLSFNS---ISAVDNGSLANTPHLR 222 (305)
T ss_dssp CSCC------SSCCTTCSEEECTTSCCCEECTGGG-----------TTCTTCCEEECCSSC---CCEECTTTGGGSTTCC
T ss_pred cccC------cccCCccCEEECCCCcCCCCChhHh-----------hcccccccccccccc---ccccccccccccccce
Confidence 3111 1135778888886665444444444 677888888887665 6677666677888888
Q ss_pred EEEEeeeCCCCCCCCCCccccchhhhhccCCCccceeeecCCcccc
Q 039096 382 NIRIKMEGDTREKPLLRDDKAWGLSCLTRYPRLSKLVLDFGDTDGH 427 (554)
Q Consensus 382 ~L~l~~~~~c~~~~~l~~~~~~~l~~l~~~~~L~~L~l~c~~~~~~ 427 (554)
+|+++ +|... .++ ..+..+++|+.|+++.|+++..
T Consensus 223 ~L~L~---~N~L~-~lp-------~~l~~l~~L~~L~Ls~N~i~~i 257 (305)
T d1xkua_ 223 ELHLN---NNKLV-KVP-------GGLADHKYIQVVYLHNNNISAI 257 (305)
T ss_dssp EEECC---SSCCS-SCC-------TTTTTCSSCCEEECCSSCCCCC
T ss_pred eeecc---ccccc-ccc-------cccccccCCCEEECCCCccCcc
Confidence 88887 66322 111 2466688888888886667654
No 11
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=98.91 E-value=2.3e-11 Score=117.29 Aligned_cols=36 Identities=17% Similarity=0.178 Sum_probs=21.0
Q ss_pred hcCCCCceEEeecccCCccCccccccCcCCCCCCEEEEe
Q 039096 348 TRWKSLKELSFWIEVGELLTPLPVAGLDECPILENIRIK 386 (554)
Q Consensus 348 ~~~~~L~~L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~ 386 (554)
..+++|+.|+++++. +++..+..+.++++|++|+++
T Consensus 241 ~~~~~L~~L~Ls~N~---l~g~iP~~l~~L~~L~~L~Ls 276 (313)
T d1ogqa_ 241 GLSKNLNGLDLRNNR---IYGTLPQGLTQLKFLHSLNVS 276 (313)
T ss_dssp CCCTTCCEEECCSSC---CEECCCGGGGGCTTCCEEECC
T ss_pred ccccccccccCccCe---ecccCChHHhCCCCCCEEECc
Confidence 455666666665544 444444446666666666665
No 12
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=98.90 E-value=3e-11 Score=116.47 Aligned_cols=199 Identities=16% Similarity=0.088 Sum_probs=118.7
Q ss_pred HhCCCCCcEEEecCCCCCCCchhhHHHHHhcCCCCcEeecccccC------------cccEEEecCCCCCCHHHHHHHHh
Q 039096 192 FSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHS------------WLESLSIKNCGDLSDMSLVAIGR 259 (554)
Q Consensus 192 ~~~~~~L~~L~L~~c~~l~~~~~~l~~l~~~~~~L~~L~l~~~~~------------~L~~L~l~~~~~l~~~~l~~l~~ 259 (554)
...+++|++|+|++|+++++..+. .+ .++++|++|+++++.- .|+.+++++|. +.......+ .
T Consensus 72 l~~L~~L~~L~Ls~~N~l~g~iP~--~i-~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~-~~~~~p~~l-~ 146 (313)
T d1ogqa_ 72 LANLPYLNFLYIGGINNLVGPIPP--AI-AKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNA-LSGTLPPSI-S 146 (313)
T ss_dssp GGGCTTCSEEEEEEETTEESCCCG--GG-GGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSE-EESCCCGGG-G
T ss_pred HhcCcccccccccccccccccccc--cc-ccccccchhhhccccccccccccccchhhhccccccccc-ccccCchhh-c
Confidence 357899999999988778655433 56 7899999999876531 67777777765 221111223 3
Q ss_pred cCCCCcEEEecCCCCCCHHHHHHHHHHhcCC-ccEEEEeccCCCChhHHHHHHhhcCCCccEEEeeeeeccccchhhhcc
Q 039096 260 GCSKLVKFEVEGCKNITVDGLRTLASLLRET-LVVIKIYCCENLGAVASCKALKPIRDRIQKLHIDCVWDGIRSSEAKAT 338 (554)
Q Consensus 260 ~~~~L~~L~L~~c~~i~~~~~~~l~~~~~~~-L~~L~l~~c~~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~~~ 338 (554)
.+++|+.+++++|.. +......+ ..+ .. ++.+.+..+....... .... ......+++..+..........
T Consensus 147 ~l~~L~~l~l~~n~l-~~~ip~~~-~~l-~~l~~~l~~~~n~l~~~~~---~~~~-~l~~~~l~l~~~~~~~~~~~~~-- 217 (313)
T d1ogqa_ 147 SLPNLVGITFDGNRI-SGAIPDSY-GSF-SKLFTSMTISRNRLTGKIP---PTFA-NLNLAFVDLSRNMLEGDASVLF-- 217 (313)
T ss_dssp GCTTCCEEECCSSCC-EEECCGGG-GCC-CTTCCEEECCSSEEEEECC---GGGG-GCCCSEEECCSSEEEECCGGGC--
T ss_pred cCcccceeecccccc-cccccccc-ccc-ccccccccccccccccccc---cccc-cccccccccccccccccccccc--
Confidence 377788888887762 21100111 112 23 3666655543221100 1111 1224456664333233333333
Q ss_pred CCccchhhhhcCCCCceEEeecccCCccCccccccCcCCCCCCEEEEeeeCCCCCCCCCCccccchhhhhccCCCcccee
Q 039096 339 GNTSTIFSKTRWKSLKELSFWIEVGELLTPLPVAGLDECPILENIRIKMEGDTREKPLLRDDKAWGLSCLTRYPRLSKLV 418 (554)
Q Consensus 339 ~~~~~~~~~~~~~~L~~L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~~~~~c~~~~~l~~~~~~~l~~l~~~~~L~~L~ 418 (554)
..+++|+.+++..+. ++.... .+..+++|+.|+++ ++.....++ ..+.++++|+.|+
T Consensus 218 ---------~~~~~l~~l~~~~~~---l~~~~~-~~~~~~~L~~L~Ls---~N~l~g~iP-------~~l~~L~~L~~L~ 274 (313)
T d1ogqa_ 218 ---------GSDKNTQKIHLAKNS---LAFDLG-KVGLSKNLNGLDLR---NNRIYGTLP-------QGLTQLKFLHSLN 274 (313)
T ss_dssp ---------CTTSCCSEEECCSSE---ECCBGG-GCCCCTTCCEEECC---SSCCEECCC-------GGGGGCTTCCEEE
T ss_pred ---------ccccccccccccccc---cccccc-ccccccccccccCc---cCeecccCC-------hHHhCCCCCCEEE
Confidence 678899999987665 444333 47788999999998 663332222 4677899999999
Q ss_pred eecCCcccc
Q 039096 419 LDFGDTDGH 427 (554)
Q Consensus 419 l~c~~~~~~ 427 (554)
|+.|++++.
T Consensus 275 Ls~N~l~g~ 283 (313)
T d1ogqa_ 275 VSFNNLCGE 283 (313)
T ss_dssp CCSSEEEEE
T ss_pred CcCCccccc
Confidence 998888764
No 13
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.88 E-value=2.6e-09 Score=97.38 Aligned_cols=171 Identities=19% Similarity=0.201 Sum_probs=81.9
Q ss_pred CCCCcEEEecCCCCCCCchhhHHHHHhcCCCCcEeecccccCcccEEEecCCCCCCHHHHHHHHhcCCCCcEEEecCCCC
Q 039096 195 LPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKN 274 (554)
Q Consensus 195 ~~~L~~L~L~~c~~l~~~~~~l~~l~~~~~~L~~L~l~~~~~~L~~L~l~~~~~l~~~~l~~l~~~~~~L~~L~L~~c~~ 274 (554)
+.+|++|++.+|. +++ +..+ .++++|+.|+++++. +++. ..+ ..+++|+.+++++|.
T Consensus 40 l~~L~~L~l~~~~-i~~----l~~l-~~l~~L~~L~ls~n~-------------i~~~--~~l-~~l~~l~~l~~~~n~- 96 (227)
T d1h6ua2 40 LDGITTLSAFGTG-VTT----IEGV-QYLNNLIGLELKDNQ-------------ITDL--APL-KNLTKITELELSGNP- 96 (227)
T ss_dssp HHTCCEEECTTSC-CCC----CTTG-GGCTTCCEEECCSSC-------------CCCC--GGG-TTCCSCCEEECCSCC-
T ss_pred cCCcCEEECCCCC-CCc----chhH-hcCCCCcEeecCCce-------------eecc--ccc-ccccccccccccccc-
Confidence 4688999998864 754 3345 678888866665542 2211 111 225566666666554
Q ss_pred CCHHHHHHHHHHhcCCccEEEEeccCCCChhHHHHHHhhcCCCccEEEeeeeeccccchhhhccCCccchhhhhcCCCCc
Q 039096 275 ITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQKLHIDCVWDGIRSSEAKATGNTSTIFSKTRWKSLK 354 (554)
Q Consensus 275 i~~~~~~~l~~~~~~~L~~L~l~~c~~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 354 (554)
+++. ..+. .+ ++|+.+.+++|.... ... + ...+.++.+.++++.+... ..+ ..+++|+
T Consensus 97 ~~~i--~~l~-~l-~~L~~l~l~~~~~~~-~~~---~-~~~~~~~~l~~~~~~~~~~--~~~-----------~~~~~L~ 154 (227)
T d1h6ua2 97 LKNV--SAIA-GL-QSIKTLDLTSTQITD-VTP---L-AGLSNLQVLYLDLNQITNI--SPL-----------AGLTNLQ 154 (227)
T ss_dssp CSCC--GGGT-TC-TTCCEEECTTSCCCC-CGG---G-TTCTTCCEEECCSSCCCCC--GGG-----------GGCTTCC
T ss_pred cccc--cccc-cc-ccccccccccccccc-cch---h-ccccchhhhhchhhhhchh--hhh-----------ccccccc
Confidence 2211 1111 12 556666665554331 111 1 1244555555544332211 112 3455666
Q ss_pred eEEeecccCCccCccccccCcCCCCCCEEEEeeeCCCCCCCCCCccccchhhhhccCCCccceeeecCCcccc
Q 039096 355 ELSFWIEVGELLTPLPVAGLDECPILENIRIKMEGDTREKPLLRDDKAWGLSCLTRYPRLSKLVLDFGDTDGH 427 (554)
Q Consensus 355 ~L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~~~~~c~~~~~l~~~~~~~l~~l~~~~~L~~L~l~c~~~~~~ 427 (554)
+|++.+|. +++. ..+.++++|++|+++ +| .++ + +..+..+++|+.|+++.+++++.
T Consensus 155 ~L~l~~n~---~~~~--~~l~~l~~L~~L~Ls---~n----~l~---~--l~~l~~l~~L~~L~Ls~N~lt~i 210 (227)
T d1h6ua2 155 YLSIGNAQ---VSDL--TPLANLSKLTTLKAD---DN----KIS---D--ISPLASLPNLIEVHLKNNQISDV 210 (227)
T ss_dssp EEECCSSC---CCCC--GGGTTCTTCCEEECC---SS----CCC---C--CGGGGGCTTCCEEECTTSCCCBC
T ss_pred cccccccc---cccc--hhhcccccceecccC---CC----ccC---C--ChhhcCCCCCCEEECcCCcCCCC
Confidence 66665443 2222 124555666666665 33 222 1 12344556666666664455543
No 14
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.82 E-value=2.8e-10 Score=107.87 Aligned_cols=14 Identities=7% Similarity=0.038 Sum_probs=12.3
Q ss_pred HHhccccceeeecc
Q 039096 480 ISNCITLRKVFVHC 493 (554)
Q Consensus 480 l~~~~~L~~L~i~~ 493 (554)
++++++|+.|++++
T Consensus 221 ~~~~~~L~~L~l~~ 234 (284)
T d1ozna_ 221 LAPLRALQYLRLND 234 (284)
T ss_dssp HTTCTTCCEEECCS
T ss_pred cccccccCEEEecC
Confidence 77899999999985
No 15
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.79 E-value=1.3e-09 Score=103.19 Aligned_cols=195 Identities=15% Similarity=0.096 Sum_probs=111.8
Q ss_pred CCCcEEEecCCCCCCCchhhHHHHHhcCCCCcEeecccccC------------cccEEEecCCCCCCHHHHHHHHhcCCC
Q 039096 196 PLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHS------------WLESLSIKNCGDLSDMSLVAIGRGCSK 263 (554)
Q Consensus 196 ~~L~~L~L~~c~~l~~~~~~l~~l~~~~~~L~~L~l~~~~~------------~L~~L~l~~~~~l~~~~l~~l~~~~~~ 263 (554)
+++++|+|++ ++++.... ..+ .++++|+.|++++..- .++.+.+..+..++......+ .++++
T Consensus 32 ~~~~~L~Ls~-N~i~~i~~--~~f-~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~-~~l~~ 106 (284)
T d1ozna_ 32 AASQRIFLHG-NRISHVPA--ASF-RACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATF-HGLGR 106 (284)
T ss_dssp TTCSEEECTT-SCCCEECT--TTT-TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTT-TTCTT
T ss_pred CCCCEEECcC-CcCCCCCH--HHh-hccccccccccccccccccccccccccccccccccccccccccccchhh-ccccc
Confidence 4789999988 45865442 245 7788899888876431 555555544433333222223 23677
Q ss_pred CcEEEecCCCCCCHHHHHHHHHHhcCCccEEEEeccCCCChhHHHHHHhhcCCCccEEEeeeeeccccchhhhccCCccc
Q 039096 264 LVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQKLHIDCVWDGIRSSEAKATGNTST 343 (554)
Q Consensus 264 L~~L~L~~c~~i~~~~~~~l~~~~~~~L~~L~l~~c~~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~ 343 (554)
|++|++++|.. ..... ...... ++|+.+++.++... ... ......+++|++|++..+.+.......+
T Consensus 107 L~~L~l~~n~~-~~~~~-~~~~~~-~~L~~l~l~~N~l~-~i~--~~~f~~~~~L~~L~l~~N~l~~l~~~~f------- 173 (284)
T d1ozna_ 107 LHTLHLDRCGL-QELGP-GLFRGL-AALQYLYLQDNALQ-ALP--DDTFRDLGNLTHLFLHGNRISSVPERAF------- 173 (284)
T ss_dssp CCEEECTTSCC-CCCCT-TTTTTC-TTCCEEECCSSCCC-CCC--TTTTTTCTTCCEEECCSSCCCEECTTTT-------
T ss_pred CCEEecCCccc-ccccc-cccchh-cccchhhhcccccc-ccC--hhHhccccchhhcccccCcccccchhhh-------
Confidence 78887777662 21110 111112 56777777765432 110 0112345667777776665444444444
Q ss_pred hhhhhcCCCCceEEeecccCCccCccccccCcCCCCCCEEEEeeeCCCCCCCCCCccccchhhhhccCCCccceeeecCC
Q 039096 344 IFSKTRWKSLKELSFWIEVGELLTPLPVAGLDECPILENIRIKMEGDTREKPLLRDDKAWGLSCLTRYPRLSKLVLDFGD 423 (554)
Q Consensus 344 ~~~~~~~~~L~~L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~~~~~c~~~~~l~~~~~~~l~~l~~~~~L~~L~l~c~~ 423 (554)
..+++|+.+++.++. ++.+....+..+++|+.|+++ ++ .+. ......+..+++|+.|+++.|.
T Consensus 174 ----~~l~~L~~l~l~~N~---l~~i~~~~f~~l~~L~~L~l~---~N----~i~---~~~~~~~~~~~~L~~L~l~~N~ 236 (284)
T d1ozna_ 174 ----RGLHSLDRLLLHQNR---VAHVHPHAFRDLGRLMTLYLF---AN----NLS---ALPTEALAPLRALQYLRLNDNP 236 (284)
T ss_dssp ----TTCTTCCEEECCSSC---CCEECTTTTTTCTTCCEEECC---SS----CCS---CCCHHHHTTCTTCCEEECCSSC
T ss_pred ----ccccccchhhhhhcc---ccccChhHhhhhhhccccccc---cc----ccc---cccccccccccccCEEEecCCC
Confidence 567777777776554 566666667777777777776 44 233 2223455667777777777554
Q ss_pred cc
Q 039096 424 TD 425 (554)
Q Consensus 424 ~~ 425 (554)
+.
T Consensus 237 l~ 238 (284)
T d1ozna_ 237 WV 238 (284)
T ss_dssp EE
T ss_pred CC
Confidence 43
No 16
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.75 E-value=1.1e-08 Score=91.85 Aligned_cols=163 Identities=15% Similarity=0.141 Sum_probs=108.7
Q ss_pred CCCcEEEecCCCCCCCchhhHHHHHhcCCCCcEeecccccCcccEEEecCCCCCCHHHHHHHHhcCCCCcEEEecCCCCC
Q 039096 196 PLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNI 275 (554)
Q Consensus 196 ~~L~~L~L~~c~~l~~~~~~l~~l~~~~~~L~~L~l~~~~~~L~~L~l~~~~~l~~~~l~~l~~~~~~L~~L~L~~c~~i 275 (554)
.+|++|++++|. +++. ..+ +.+++|++|++ ++|. +++. ..+ ..+++|+.|++++|. +
T Consensus 46 ~~L~~L~l~~~~-i~~l----~~l-~~l~~L~~L~L------------~~n~-i~~l--~~~-~~l~~L~~L~l~~n~-i 102 (210)
T d1h6ta2 46 NSIDQIIANNSD-IKSV----QGI-QYLPNVTKLFL------------NGNK-LTDI--KPL-ANLKNLGWLFLDENK-V 102 (210)
T ss_dssp HTCCEEECTTSC-CCCC----TTG-GGCTTCCEEEC------------CSSC-CCCC--GGG-TTCTTCCEEECCSSC-C
T ss_pred cCccEEECcCCC-CCCc----hhH-hhCCCCCEEeC------------CCcc-ccCc--ccc-ccCcccccccccccc-c
Confidence 478999998854 6542 234 66777775554 4444 4432 122 348899999999887 6
Q ss_pred CHHHHHHHHHHhcCCccEEEEeccCCCChhHHHHHHhhcCCCccEEEeeeeeccccchhhhccCCccchhhhhcCCCCce
Q 039096 276 TVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQKLHIDCVWDGIRSSEAKATGNTSTIFSKTRWKSLKE 355 (554)
Q Consensus 276 ~~~~~~~l~~~~~~~L~~L~l~~c~~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 355 (554)
++ +..+ ..+ ++|+.|++.+|... ... .+ ..++.++.++++++.+... ..+ ..+++|+.
T Consensus 103 ~~--l~~l-~~l-~~L~~L~l~~~~~~-~~~---~l-~~l~~l~~l~~~~n~l~~~--~~~-----------~~l~~L~~ 160 (210)
T d1h6ta2 103 KD--LSSL-KDL-KKLKSLSLEHNGIS-DIN---GL-VHLPQLESLYLGNNKITDI--TVL-----------SRLTKLDT 160 (210)
T ss_dssp CC--GGGG-TTC-TTCCEEECTTSCCC-CCG---GG-GGCTTCCEEECCSSCCCCC--GGG-----------GGCTTCSE
T ss_pred cc--cccc-ccc-cccccccccccccc-ccc---cc-ccccccccccccccccccc--ccc-----------cccccccc
Confidence 64 2222 223 78999999888654 222 22 3478899999977765432 233 67899999
Q ss_pred EEeecccCCccCccccccCcCCCCCCEEEEeeeCCCCCCCCCCccccchhhhhccCCCccceeee
Q 039096 356 LSFWIEVGELLTPLPVAGLDECPILENIRIKMEGDTREKPLLRDDKAWGLSCLTRYPRLSKLVLD 420 (554)
Q Consensus 356 L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~~~~~c~~~~~l~~~~~~~l~~l~~~~~L~~L~l~ 420 (554)
++++++. ++++. .+.++++|++|+++ +| .++ + +..+..+++|+.|+|+
T Consensus 161 l~l~~n~---l~~i~--~l~~l~~L~~L~Ls---~N----~i~---~--l~~l~~l~~L~~L~Ls 208 (210)
T d1h6ta2 161 LSLEDNQ---ISDIV--PLAGLTKLQNLYLS---KN----HIS---D--LRALAGLKNLDVLELF 208 (210)
T ss_dssp EECCSSC---CCCCG--GGTTCTTCCEEECC---SS----CCC---B--CGGGTTCTTCSEEEEE
T ss_pred ccccccc---ccccc--cccCCCCCCEEECC---CC----CCC---C--ChhhcCCCCCCEEEcc
Confidence 9998765 66553 36788999999997 55 344 2 3357778999999986
No 17
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.75 E-value=9.6e-09 Score=91.44 Aligned_cols=13 Identities=23% Similarity=0.307 Sum_probs=7.0
Q ss_pred CCCCcEEEecCCC
Q 039096 261 CSKLVKFEVEGCK 273 (554)
Q Consensus 261 ~~~L~~L~L~~c~ 273 (554)
+++|+.|++++|.
T Consensus 83 l~~L~~L~l~~n~ 95 (199)
T d2omxa2 83 LTKLVDILMNNNQ 95 (199)
T ss_dssp CTTCCEEECCSSC
T ss_pred Ccccccccccccc
Confidence 5555555555554
No 18
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.74 E-value=2.3e-08 Score=90.85 Aligned_cols=186 Identities=18% Similarity=0.157 Sum_probs=121.0
Q ss_pred CCCCCEEEecccccccccCCCCCCCCCccccCCCCHHHHHHHHhCCCCCcEEEecCCCCCCCchhhHHHHHhcCCCCcEe
Q 039096 150 CPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARISEEGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGL 229 (554)
Q Consensus 150 ~~~L~~L~l~~c~~l~~~~~~~~~~g~~~~~~~i~~~~l~~l~~~~~~L~~L~L~~c~~l~~~~~~l~~l~~~~~~L~~L 229 (554)
+.+|++|++.+| .+++ +.. ...+++|++|+++++ .+++.. .+ ..+++|+.+
T Consensus 40 l~~L~~L~l~~~--------------------~i~~--l~~-l~~l~~L~~L~ls~n-~i~~~~----~l-~~l~~l~~l 90 (227)
T d1h6ua2 40 LDGITTLSAFGT--------------------GVTT--IEG-VQYLNNLIGLELKDN-QITDLA----PL-KNLTKITEL 90 (227)
T ss_dssp HHTCCEEECTTS--------------------CCCC--CTT-GGGCTTCCEEECCSS-CCCCCG----GG-TTCCSCCEE
T ss_pred cCCcCEEECCCC--------------------CCCc--chh-HhcCCCCcEeecCCc-eeeccc----cc-ccccccccc
Confidence 468999999875 1221 111 257899999999985 476543 34 677777765
Q ss_pred ecccccCcccEEEecCCCCCCHHHHHHHHhcCCCCcEEEecCCCCCCHHHHHHHHHHhcCCccEEEEeccCCCChhHHHH
Q 039096 230 KLGQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCK 309 (554)
Q Consensus 230 ~l~~~~~~L~~L~l~~~~~l~~~~l~~l~~~~~~L~~L~L~~c~~i~~~~~~~l~~~~~~~L~~L~l~~c~~~~~~~~l~ 309 (554)
.+. +|. +++ +..+. .+++|+.+++++|......++. .. +.++.+.+.++.... ...
T Consensus 91 ~~~------------~n~-~~~--i~~l~-~l~~L~~l~l~~~~~~~~~~~~----~~-~~~~~l~~~~~~~~~-~~~-- 146 (227)
T d1h6ua2 91 ELS------------GNP-LKN--VSAIA-GLQSIKTLDLTSTQITDVTPLA----GL-SNLQVLYLDLNQITN-ISP-- 146 (227)
T ss_dssp ECC------------SCC-CSC--CGGGT-TCTTCCEEECTTSCCCCCGGGT----TC-TTCCEEECCSSCCCC-CGG--
T ss_pred ccc------------ccc-ccc--ccccc-ccccccccccccccccccchhc----cc-cchhhhhchhhhhch-hhh--
Confidence 554 443 222 11232 3888999999988743221211 12 688888887775442 222
Q ss_pred HHhhcCCCccEEEeeeeeccccchhhhccCCccchhhhhcCCCCceEEeecccCCccCccccccCcCCCCCCEEEEeeeC
Q 039096 310 ALKPIRDRIQKLHIDCVWDGIRSSEAKATGNTSTIFSKTRWKSLKELSFWIEVGELLTPLPVAGLDECPILENIRIKMEG 389 (554)
Q Consensus 310 ~l~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~~~~ 389 (554)
...+++|++|+++++.+... ..+ .++++|++|++++|. +++++ .+.++++|++|+++
T Consensus 147 --~~~~~~L~~L~l~~n~~~~~--~~l-----------~~l~~L~~L~Ls~n~---l~~l~--~l~~l~~L~~L~Ls--- 203 (227)
T d1h6ua2 147 --LAGLTNLQYLSIGNAQVSDL--TPL-----------ANLSKLTTLKADDNK---ISDIS--PLASLPNLIEVHLK--- 203 (227)
T ss_dssp --GGGCTTCCEEECCSSCCCCC--GGG-----------TTCTTCCEEECCSSC---CCCCG--GGGGCTTCCEEECT---
T ss_pred --hccccccccccccccccccc--hhh-----------cccccceecccCCCc---cCCCh--hhcCCCCCCEEECc---
Confidence 23578899999977764322 224 678999999998765 66654 36788999999998
Q ss_pred CCCCCCCCCccccchhhhhccCCCccceeee
Q 039096 390 DTREKPLLRDDKAWGLSCLTRYPRLSKLVLD 420 (554)
Q Consensus 390 ~c~~~~~l~~~~~~~l~~l~~~~~L~~L~l~ 420 (554)
+| .++ + +..+..+++|+.|+++
T Consensus 204 ~N----~lt---~--i~~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 204 NN----QIS---D--VSPLANTSNLFIVTLT 225 (227)
T ss_dssp TS----CCC---B--CGGGTTCTTCCEEEEE
T ss_pred CC----cCC---C--CcccccCCCCCEEEee
Confidence 66 344 2 2246778999999886
No 19
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.70 E-value=1.2e-08 Score=95.42 Aligned_cols=176 Identities=15% Similarity=0.034 Sum_probs=114.7
Q ss_pred CCCcEEEecCCCCCCCchhhHHHHHhcCCCCcEeecccccCcccEEEecCCCCCCHHHHHHHHhcCCCCcEEEecCCCCC
Q 039096 196 PLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNI 275 (554)
Q Consensus 196 ~~L~~L~L~~c~~l~~~~~~l~~l~~~~~~L~~L~l~~~~~~L~~L~l~~~~~l~~~~l~~l~~~~~~L~~L~L~~c~~i 275 (554)
+++++|+|++ +.++.... ..+ .++++|++|+++++ +++.+.. + ..+++|++|++++|. +
T Consensus 31 ~~l~~L~Ls~-N~i~~l~~--~~f-~~l~~L~~L~L~~N--~l~~l~~-------------~-~~l~~L~~L~Ls~N~-l 89 (266)
T d1p9ag_ 31 KDTTILHLSE-NLLYTFSL--ATL-MPYTRLTQLNLDRA--ELTKLQV-------------D-GTLPVLGTLDLSHNQ-L 89 (266)
T ss_dssp TTCCEEECTT-SCCSEEEG--GGG-TTCTTCCEEECTTS--CCCEEEC-------------C-SCCTTCCEEECCSSC-C
T ss_pred cCCCEEECcC-CcCCCcCH--HHh-hccccccccccccc--ccccccc-------------c-ccccccccccccccc-c
Confidence 4799999988 45865442 245 67888887777655 3443321 1 137889999999887 4
Q ss_pred CHHHHHHHHHHhcCCccEEEEeccCCCChhHHHHHHhhcCCCccEEEeeeeeccccchhhhccCCccchhhhhcCCCCce
Q 039096 276 TVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDRIQKLHIDCVWDGIRSSEAKATGNTSTIFSKTRWKSLKE 355 (554)
Q Consensus 276 ~~~~~~~l~~~~~~~L~~L~l~~c~~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 355 (554)
+.. ......+ ++|+.|+++++....... ......+++++|++..+.+.......+ ..+++|+.
T Consensus 90 ~~~--~~~~~~l-~~L~~L~l~~~~~~~~~~---~~~~~l~~l~~L~l~~n~l~~l~~~~~-----------~~l~~l~~ 152 (266)
T d1p9ag_ 90 QSL--PLLGQTL-PALTVLDVSFNRLTSLPL---GALRGLGELQELYLKGNELKTLPPGLL-----------TPTPKLEK 152 (266)
T ss_dssp SSC--CCCTTTC-TTCCEEECCSSCCCCCCS---STTTTCTTCCEEECTTSCCCCCCTTTT-----------TTCTTCCE
T ss_pred ccc--ccccccc-cccccccccccccceeec---cccccccccccccccccccceeccccc-----------cccccchh
Confidence 421 1122334 789999998876442111 122346778999987766554444444 67888999
Q ss_pred EEeecccCCccCccccccCcCCCCCCEEEEeeeCCCCCCCCCCccccchhhhhccCCCccceeeecCC
Q 039096 356 LSFWIEVGELLTPLPVAGLDECPILENIRIKMEGDTREKPLLRDDKAWGLSCLTRYPRLSKLVLDFGD 423 (554)
Q Consensus 356 L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~~~~~c~~~~~l~~~~~~~l~~l~~~~~L~~L~l~c~~ 423 (554)
++++++. ++.+....+..+++|++|+++ +++.. .++ ..+..+++|+.|+|+.|.
T Consensus 153 l~l~~N~---l~~~~~~~~~~l~~L~~L~Ls---~N~L~-~lp-------~~~~~~~~L~~L~L~~Np 206 (266)
T d1p9ag_ 153 LSLANNN---LTELPAGLLNGLENLDTLLLQ---ENSLY-TIP-------KGFFGSHLLPFAFLHGNP 206 (266)
T ss_dssp EECTTSC---CSCCCTTTTTTCTTCCEEECC---SSCCC-CCC-------TTTTTTCCCSEEECCSCC
T ss_pred ccccccc---ccccCccccccccccceeecc---cCCCc-ccC-------hhHCCCCCCCEEEecCCC
Confidence 9997665 777777777888999999998 66333 222 134457888888888553
No 20
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.60 E-value=2.1e-08 Score=89.17 Aligned_cols=147 Identities=12% Similarity=0.130 Sum_probs=99.8
Q ss_pred ccEEEecCCCCCCHHHHHHHHhcCCCCcEEEecCCCCCCHHHHHHHHHHhcCCccEEEEeccCCCChhHHHHHHhhcCCC
Q 039096 238 LESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRDR 317 (554)
Q Consensus 238 L~~L~l~~~~~l~~~~l~~l~~~~~~L~~L~L~~c~~i~~~~~~~l~~~~~~~L~~L~l~~c~~~~~~~~l~~l~~~~~~ 317 (554)
+++|+++++. +++. ..+ ..+++|++|++++|. +++. .. ...+ ++|++|++++|... ...+ + ..++.
T Consensus 42 l~~L~l~~~~-i~~l--~~l-~~l~nL~~L~Ls~N~-l~~~--~~-l~~l-~~L~~L~l~~n~~~-~~~~---l-~~l~~ 107 (199)
T d2omxa2 42 VTTLQADRLG-IKSI--DGV-EYLNNLTQINFSNNQ-LTDI--TP-LKNL-TKLVDILMNNNQIA-DITP---L-ANLTN 107 (199)
T ss_dssp CCEEECTTSC-CCCC--TTG-GGCTTCCEEECCSSC-CCCC--GG-GTTC-TTCCEEECCSSCCC-CCGG---G-TTCTT
T ss_pred CCEEECCCCC-CCCc--ccc-ccCCCcCcCcccccc-ccCc--cc-ccCC-cccccccccccccc-cccc---c-ccccc
Confidence 3355555554 3331 122 348999999999997 6642 12 2334 89999999998755 2222 2 35889
Q ss_pred ccEEEeeeeeccccchhhhccCCccchhhhhcCCCCceEEeecccCCccCccccccCcCCCCCCEEEEeeeCCCCCCCCC
Q 039096 318 IQKLHIDCVWDGIRSSEAKATGNTSTIFSKTRWKSLKELSFWIEVGELLTPLPVAGLDECPILENIRIKMEGDTREKPLL 397 (554)
Q Consensus 318 L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~~~~~c~~~~~l 397 (554)
|+.|+++++.... ...+ ..+++|+.|+++++. ++.+ ..+..+++|+.|++. +| .+
T Consensus 108 L~~L~l~~~~~~~--~~~~-----------~~l~~L~~L~l~~n~---l~~~--~~l~~~~~L~~L~l~---~n----~l 162 (199)
T d2omxa2 108 LTGLTLFNNQITD--IDPL-----------KNLTNLNRLELSSNT---ISDI--SALSGLTSLQQLNFS---SN----QV 162 (199)
T ss_dssp CSEEECCSSCCCC--CGGG-----------TTCTTCSEEECCSSC---CCCC--GGGTTCTTCSEEECC---SS----CC
T ss_pred ccccccccccccc--cccc-----------chhhhhHHhhhhhhh---hccc--ccccccccccccccc---cc----cc
Confidence 9999997665332 2234 678999999998765 5544 347789999999997 55 34
Q ss_pred CccccchhhhhccCCCccceeeecCCccccc
Q 039096 398 RDDKAWGLSCLTRYPRLSKLVLDFGDTDGHN 428 (554)
Q Consensus 398 ~~~~~~~l~~l~~~~~L~~L~l~c~~~~~~~ 428 (554)
+ + +..+.++++|+.|+++.+.+++..
T Consensus 163 ~---~--l~~l~~l~~L~~L~ls~N~i~~i~ 188 (199)
T d2omxa2 163 T---D--LKPLANLTTLERLDISSNKVSDIS 188 (199)
T ss_dssp C---C--CGGGTTCTTCCEEECCSSCCCCCG
T ss_pred c---C--CccccCCCCCCEEECCCCCCCCCc
Confidence 4 2 235778999999999977787643
No 21
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.55 E-value=6e-08 Score=86.88 Aligned_cols=158 Identities=14% Similarity=0.152 Sum_probs=104.7
Q ss_pred cccEEEecCCCCCCHHHHHHHHhcCCCCcEEEecCCCCCCHHHHHHHHHHhcCCccEEEEeccCCCChhHHHHHHhhcCC
Q 039096 237 WLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRD 316 (554)
Q Consensus 237 ~L~~L~l~~~~~l~~~~l~~l~~~~~~L~~L~L~~c~~i~~~~~~~l~~~~~~~L~~L~l~~c~~~~~~~~l~~l~~~~~ 316 (554)
+|++|++++|. +++. ..+ ..+++|++|++++|. +++. ..+ ..+ ++|+.|++++|. ++... . ...++
T Consensus 47 ~L~~L~l~~~~-i~~l--~~l-~~l~~L~~L~L~~n~-i~~l--~~~-~~l-~~L~~L~l~~n~-i~~l~---~-l~~l~ 112 (210)
T d1h6ta2 47 SIDQIIANNSD-IKSV--QGI-QYLPNVTKLFLNGNK-LTDI--KPL-ANL-KNLGWLFLDENK-VKDLS---S-LKDLK 112 (210)
T ss_dssp TCCEEECTTSC-CCCC--TTG-GGCTTCCEEECCSSC-CCCC--GGG-TTC-TTCCEEECCSSC-CCCGG---G-GTTCT
T ss_pred CccEEECcCCC-CCCc--hhH-hhCCCCCEEeCCCcc-ccCc--ccc-ccC-cccccccccccc-ccccc---c-ccccc
Confidence 34566777665 4432 122 459999999999997 6642 222 234 899999999985 43322 2 23478
Q ss_pred CccEEEeeeeeccccchhhhccCCccchhhhhcCCCCceEEeecccCCccCccccccCcCCCCCCEEEEeeeCCCCCCCC
Q 039096 317 RIQKLHIDCVWDGIRSSEAKATGNTSTIFSKTRWKSLKELSFWIEVGELLTPLPVAGLDECPILENIRIKMEGDTREKPL 396 (554)
Q Consensus 317 ~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~~~~~c~~~~~ 396 (554)
+|+.|++..+... ....+ ..+++|+.++++.+. +++.. .+..+++|+.++++ ++ .
T Consensus 113 ~L~~L~l~~~~~~--~~~~l-----------~~l~~l~~l~~~~n~---l~~~~--~~~~l~~L~~l~l~---~n----~ 167 (210)
T d1h6ta2 113 KLKSLSLEHNGIS--DINGL-----------VHLPQLESLYLGNNK---ITDIT--VLSRLTKLDTLSLE---DN----Q 167 (210)
T ss_dssp TCCEEECTTSCCC--CCGGG-----------GGCTTCCEEECCSSC---CCCCG--GGGGCTTCSEEECC---SS----C
T ss_pred ccccccccccccc--ccccc-----------ccccccccccccccc---ccccc--cccccccccccccc---cc----c
Confidence 9999999665432 22344 678999999997665 55433 34678999999997 55 3
Q ss_pred CCccccchhhhhccCCCccceeeecCCcccccccccccCCCCch
Q 039096 397 LRDDKAWGLSCLTRYPRLSKLVLDFGDTDGHNQAAPYKAADLST 440 (554)
Q Consensus 397 l~~~~~~~l~~l~~~~~L~~L~l~c~~~~~~~~~~~~~~~~L~~ 440 (554)
++ + +..+.++++|+.|++++|.+++.. .+..+++|..
T Consensus 168 l~---~--i~~l~~l~~L~~L~Ls~N~i~~l~--~l~~l~~L~~ 204 (210)
T d1h6ta2 168 IS---D--IVPLAGLTKLQNLYLSKNHISDLR--ALAGLKNLDV 204 (210)
T ss_dssp CC---C--CGGGTTCTTCCEEECCSSCCCBCG--GGTTCTTCSE
T ss_pred cc---c--cccccCCCCCCEEECCCCCCCCCh--hhcCCCCCCE
Confidence 33 1 234777999999999988887643 3344444443
No 22
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.51 E-value=4.7e-07 Score=77.57 Aligned_cols=129 Identities=19% Similarity=0.137 Sum_probs=91.6
Q ss_pred HHHHHHHhCCCCCcEEEecCCCCCCCchhhHHHHHhcCCCCcEeecccccCcccEEEecCCCCCCHHHHHHHHh---cCC
Q 039096 186 EGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDLSDMSLVAIGR---GCS 262 (554)
Q Consensus 186 ~~l~~l~~~~~~L~~L~L~~c~~l~~~~~~l~~l~~~~~~L~~L~l~~~~~~L~~L~l~~~~~l~~~~l~~l~~---~~~ 262 (554)
+.+..+....+.|++|+|++++.+++.+ +..++..+..-+ +|++|++++|. +++.+...++. ..+
T Consensus 5 ~~l~~l~~n~~~L~~L~L~~~~~i~~~~--~~~l~~~L~~n~---------~L~~L~Ls~n~-l~~~~~~~la~~L~~n~ 72 (167)
T d1pgva_ 5 SCINRLREDDTDLKEVNINNMKRVSKER--IRSLIEAACNSK---------HIEKFSLANTA-ISDSEARGLIELIETSP 72 (167)
T ss_dssp HHHHHHHTTCSSCCEEECTTCCSSCHHH--HHHHHHHHTTCS---------CCCEEECTTSC-CBHHHHTTHHHHHHHCS
T ss_pred HHHHHHHhCCCCCcEEEeCCCCCCCHHH--HHHHHHHHhhCC---------ccceeeccccc-cchhHHHHHhhhhhhcc
Confidence 5677787888999999999877787766 445543332222 35577778886 88877655543 468
Q ss_pred CCcEEEecCCCCCCHHHHHHHHHHhc--CCccEEEEeccC--CCChh--HHHHHHhhcCCCccEEEeeeee
Q 039096 263 KLVKFEVEGCKNITVDGLRTLASLLR--ETLVVIKIYCCE--NLGAV--ASCKALKPIRDRIQKLHIDCVW 327 (554)
Q Consensus 263 ~L~~L~L~~c~~i~~~~~~~l~~~~~--~~L~~L~l~~c~--~~~~~--~~l~~l~~~~~~L~~L~l~~~~ 327 (554)
.|++|++++|. +++.|+..++..+. ++|++|+++++. .++.. ..+.......+.|++|+++...
T Consensus 73 ~L~~L~L~~n~-i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 73 SLRVLNVESNF-LTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp SCCEEECCSSB-CCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred cccceeeehhh-cchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence 99999999997 99999998887663 579999998764 23221 2344455567889999886553
No 23
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.49 E-value=2.4e-08 Score=96.94 Aligned_cols=92 Identities=18% Similarity=0.169 Sum_probs=59.0
Q ss_pred eEEEEecCCCchhchhhcCCCCcEEeccCCcccccccccCCCccCCCcccceeecccccccCcccHHHHHhcCCCCcEEE
Q 039096 6 TSITLRGNACNLNIVPLCFDAVTNLQLSNISPWGHSLLFSPSSSSMDPRLLADLLQMSFLCFGAEFVPLLKHCKCLTSVD 85 (554)
Q Consensus 6 ~~L~l~~~~~~l~~l~~~~~~L~~L~Ls~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~l~~~~~~~~~L~~L~ 85 (554)
+.|+++++. +..+|+..++|++|+++++ .+. .+ |. ...+|+.|++.+.. ...+. .-.+.|++|+
T Consensus 41 ~~LdLs~~~--L~~lp~~~~~L~~L~Ls~N-~l~--~l--p~---~~~~L~~L~l~~n~---l~~l~---~lp~~L~~L~ 104 (353)
T d1jl5a_ 41 HELELNNLG--LSSLPELPPHLESLVASCN-SLT--EL--PE---LPQSLKSLLVDNNN---LKALS---DLPPLLEYLG 104 (353)
T ss_dssp SEEECTTSC--CSCCCSCCTTCSEEECCSS-CCS--SC--CC---CCTTCCEEECCSSC---CSCCC---SCCTTCCEEE
T ss_pred CEEEeCCCC--CCCCCCCCCCCCEEECCCC-CCc--cc--cc---chhhhhhhhhhhcc---cchhh---hhcccccccc
Confidence 478888773 5678888899999999987 443 12 22 44678888887332 11111 1124799999
Q ss_pred ecCCCCCCCChhHHHhhcCcCCCCccEEEcCCCCC
Q 039096 86 LSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSF 120 (554)
Q Consensus 86 L~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~ 120 (554)
+++|. +. .+|. .. .+++|++|+++++..
T Consensus 105 L~~n~-l~-~lp~-~~----~l~~L~~L~l~~~~~ 132 (353)
T d1jl5a_ 105 VSNNQ-LE-KLPE-LQ----NSSFLKIIDVDNNSL 132 (353)
T ss_dssp CCSSC-CS-SCCC-CT----TCTTCCEEECCSSCC
T ss_pred ccccc-cc-cccc-hh----hhccceeeccccccc
Confidence 98873 32 2332 22 346899999987753
No 24
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.48 E-value=1.1e-08 Score=95.57 Aligned_cols=156 Identities=17% Similarity=0.109 Sum_probs=107.8
Q ss_pred cccEEEecCCCCCCHHHHHHHHhcCCCCcEEEecCCCCCCHHHHHHHHHHhcCCccEEEEeccCCCChhHHHHHHhhcCC
Q 039096 237 WLESLSIKNCGDLSDMSLVAIGRGCSKLVKFEVEGCKNITVDGLRTLASLLRETLVVIKIYCCENLGAVASCKALKPIRD 316 (554)
Q Consensus 237 ~L~~L~l~~~~~l~~~~l~~l~~~~~~L~~L~L~~c~~i~~~~~~~l~~~~~~~L~~L~l~~c~~~~~~~~l~~l~~~~~ 316 (554)
++++|++++|. ++.....++. ++++|++|++++|. ++.. ... ..+ ++|++|+++++.... . .......+
T Consensus 32 ~l~~L~Ls~N~-i~~l~~~~f~-~l~~L~~L~L~~N~-l~~l--~~~-~~l-~~L~~L~Ls~N~l~~-~---~~~~~~l~ 100 (266)
T d1p9ag_ 32 DTTILHLSENL-LYTFSLATLM-PYTRLTQLNLDRAE-LTKL--QVD-GTL-PVLGTLDLSHNQLQS-L---PLLGQTLP 100 (266)
T ss_dssp TCCEEECTTSC-CSEEEGGGGT-TCTTCCEEECTTSC-CCEE--ECC-SCC-TTCCEEECCSSCCSS-C---CCCTTTCT
T ss_pred CCCEEECcCCc-CCCcCHHHhh-cccccccccccccc-cccc--ccc-ccc-ccccccccccccccc-c---cccccccc
Confidence 44566666665 5543333333 48999999999997 5531 111 234 899999999986432 1 12334578
Q ss_pred CccEEEeeeeeccccchhhhccCCccchhhhhcCCCCceEEeecccCCccCccccccCcCCCCCCEEEEeeeCCCCCCCC
Q 039096 317 RIQKLHIDCVWDGIRSSEAKATGNTSTIFSKTRWKSLKELSFWIEVGELLTPLPVAGLDECPILENIRIKMEGDTREKPL 396 (554)
Q Consensus 317 ~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~~~~~c~~~~~ 396 (554)
+|+.|+++.+.+.......+ ..+.+++.|++..+. ++.++...+..++.|+.++++ ++ .
T Consensus 101 ~L~~L~l~~~~~~~~~~~~~-----------~~l~~l~~L~l~~n~---l~~l~~~~~~~l~~l~~l~l~---~N----~ 159 (266)
T d1p9ag_ 101 ALTVLDVSFNRLTSLPLGAL-----------RGLGELQELYLKGNE---LKTLPPGLLTPTPKLEKLSLA---NN----N 159 (266)
T ss_dssp TCCEEECCSSCCCCCCSSTT-----------TTCTTCCEEECTTSC---CCCCCTTTTTTCTTCCEEECT---TS----C
T ss_pred ccccccccccccceeecccc-----------ccccccccccccccc---cceeccccccccccchhcccc---cc----c
Confidence 89999997775444444444 678999999997665 777777767889999999997 55 3
Q ss_pred CCccccchhhhhccCCCccceeeecCCcccc
Q 039096 397 LRDDKAWGLSCLTRYPRLSKLVLDFGDTDGH 427 (554)
Q Consensus 397 l~~~~~~~l~~l~~~~~L~~L~l~c~~~~~~ 427 (554)
++ ......+..+++|+.|+|+.|.++..
T Consensus 160 l~---~~~~~~~~~l~~L~~L~Ls~N~L~~l 187 (266)
T d1p9ag_ 160 LT---ELPAGLLNGLENLDTLLLQENSLYTI 187 (266)
T ss_dssp CS---CCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred cc---ccCccccccccccceeecccCCCccc
Confidence 44 33334567799999999998888754
No 25
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.45 E-value=1.5e-07 Score=90.96 Aligned_cols=93 Identities=19% Similarity=0.311 Sum_probs=58.1
Q ss_pred CCCcEEeccCCcccccccccCCCccCCCcccceeecccccccCcccHHHHHhcCCCCcEEEecCCCCCCCChhHHHhhcC
Q 039096 25 DAVTNLQLSNISPWGHSLLFSPSSSSMDPRLLADLLQMSFLCFGAEFVPLLKHCKCLTSVDLSSFYHWTEDLPPVLKAYP 104 (554)
Q Consensus 25 ~~L~~L~Ls~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~~l~~l~ 104 (554)
.+++.|||+++ .++ .+ |. ..++|++|++++. .+..+-....+|++|+++++.. +. +..+|
T Consensus 38 ~~l~~LdLs~~-~L~--~l--p~---~~~~L~~L~Ls~N------~l~~lp~~~~~L~~L~l~~n~l-~~-----l~~lp 97 (353)
T d1jl5a_ 38 RQAHELELNNL-GLS--SL--PE---LPPHLESLVASCN------SLTELPELPQSLKSLLVDNNNL-KA-----LSDLP 97 (353)
T ss_dssp HTCSEEECTTS-CCS--CC--CS---CCTTCSEEECCSS------CCSSCCCCCTTCCEEECCSSCC-SC-----CCSCC
T ss_pred cCCCEEEeCCC-CCC--CC--CC---CCCCCCEEECCCC------CCcccccchhhhhhhhhhhccc-ch-----hhhhc
Confidence 57999999988 342 12 32 3467888888832 3332323457899999987732 21 22344
Q ss_pred cCCCCccEEEcCCCCCCCCCCHHHHHHHHHhCCChHhhHHHHhccCCCCCEEEeccc
Q 039096 105 DKSAILTCLNLLKTSFSEDYRPQEIIEIIAARPNLNKWAVSIATNCPRLTLLHLAET 161 (554)
Q Consensus 105 ~~~~~L~~L~L~~~~~~~~i~~~~l~~l~~~~~~L~~L~~~~~~~~~~L~~L~l~~c 161 (554)
+.|++|++++|... ..|.. ..+++|+.|+++++
T Consensus 98 ---~~L~~L~L~~n~l~-------------~lp~~--------~~l~~L~~L~l~~~ 130 (353)
T d1jl5a_ 98 ---PLLEYLGVSNNQLE-------------KLPEL--------QNSSFLKIIDVDNN 130 (353)
T ss_dssp ---TTCCEEECCSSCCS-------------SCCCC--------TTCTTCCEEECCSS
T ss_pred ---cccccccccccccc-------------cccch--------hhhccceeeccccc
Confidence 57999999987621 11211 25678889988765
No 26
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=98.43 E-value=1.4e-06 Score=74.46 Aligned_cols=128 Identities=19% Similarity=0.162 Sum_probs=89.8
Q ss_pred HHHHHHHhCCCCCcEEEecCCCCCCCchhhHHHHHhcCCCCcEeecccccCcccEEEecCCCCCCHHHHHHHHh---cCC
Q 039096 186 EGLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDLSDMSLVAIGR---GCS 262 (554)
Q Consensus 186 ~~l~~l~~~~~~L~~L~L~~c~~l~~~~~~l~~l~~~~~~L~~L~l~~~~~~L~~L~l~~~~~l~~~~l~~l~~---~~~ 262 (554)
+.+..+..+.+.|++|++++++.+++.+ +..++..+.... +|++|++++|. +++.+...++. ..+
T Consensus 7 ~~l~~~~~~~~~L~~L~L~~~~~i~~~~--~~~l~~al~~n~---------~L~~L~Ls~n~-l~~~~~~~L~~~l~~~~ 74 (166)
T d1io0a_ 7 ETLKRIQNNDPDLEEVNLNNIMNIPVPT--LKACAEALKTNT---------YVKKFSIVGTR-SNDPVAFALAEMLKVNN 74 (166)
T ss_dssp HHHHHHHTTCTTCCEEECTTCTTCCHHH--HHHHHHHHTTCC---------SCCEEECTTSC-CCHHHHHHHHHHHHHCS
T ss_pred HHHHHHHhcCCCCcEEEcCCCCCCCHHH--HHHHHHHHhcCC---------ccCeeeccCCc-ccHHHHHHHHHHHhhcc
Confidence 4566777788999999998877787776 555554332222 34477788886 88887766544 468
Q ss_pred CCcEEEecCCCCCCHHHHHHHHHHhc--CCccEEEEeccC-CCChhHH---HHHHhhcCCCccEEEeeeee
Q 039096 263 KLVKFEVEGCKNITVDGLRTLASLLR--ETLVVIKIYCCE-NLGAVAS---CKALKPIRDRIQKLHIDCVW 327 (554)
Q Consensus 263 ~L~~L~L~~c~~i~~~~~~~l~~~~~--~~L~~L~l~~c~-~~~~~~~---l~~l~~~~~~L~~L~l~~~~ 327 (554)
.++.+++++|. +++.|+..+...+. ++|+.++|..+. .+ +..+ +......++.|++|+++.+.
T Consensus 75 ~l~~l~l~~~~-~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i-~~~~~~~La~~L~~n~~L~~L~l~~~~ 143 (166)
T d1io0a_ 75 TLKSLNVESNF-ISGSGILALVEALQSNTSLIELRIDNQSQPL-GNNVEMEIANMLEKNTTLLKFGYHFTQ 143 (166)
T ss_dssp SCCEEECCSSC-CCHHHHHHHHHGGGGCSSCCEEECCCCSSCC-CHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred cchhhhhcccc-ccchhHHHHHHHHHhCccccEEeeccCCCcC-cHHHHHHHHHHHHhCCCcCEEeCcCCC
Confidence 89999999988 89999888886552 678888886654 34 3333 33344568889999886543
No 27
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.38 E-value=4.4e-08 Score=83.71 Aligned_cols=36 Identities=22% Similarity=0.097 Sum_probs=17.7
Q ss_pred hcCCCCceEEeecccCCccCcccc-ccCcCCCCCCEEEEe
Q 039096 348 TRWKSLKELSFWIEVGELLTPLPV-AGLDECPILENIRIK 386 (554)
Q Consensus 348 ~~~~~L~~L~l~~c~~~~~t~l~~-~~l~~~~~L~~L~l~ 386 (554)
..+++|++|++++|. ++.+.. ..+..+++|+.|++.
T Consensus 84 ~~l~~L~~L~L~~N~---i~~~~~l~~l~~l~~L~~L~l~ 120 (162)
T d1a9na_ 84 QALPDLTELILTNNS---LVELGDLDPLASLKSLTYLCIL 120 (162)
T ss_dssp HHCTTCCEEECCSCC---CCCGGGGGGGGGCTTCCEEECC
T ss_pred ccccccccceecccc---ccccccccccccccccchhhcC
Confidence 345555555555443 333322 234555555555555
No 28
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=98.28 E-value=5.3e-06 Score=70.72 Aligned_cols=124 Identities=15% Similarity=0.116 Sum_probs=88.5
Q ss_pred HHHhccCCCCCEEEecccccccccCCCCCCCCCccccCCCCHHHHHHHHh---CCCCCcEEEecCCCCCCCchhhHHHHH
Q 039096 144 VSIATNCPRLTLLHLAETSTLAAMRGDPDDDGFTAEDARISEEGLIQLFS---GLPLLEELALDVGKNVRDSGSASEALK 220 (554)
Q Consensus 144 ~~~~~~~~~L~~L~l~~c~~l~~~~~~~~~~g~~~~~~~i~~~~l~~l~~---~~~~L~~L~L~~c~~l~~~~~~l~~l~ 220 (554)
..+..+.++|++|+++++ ..+++.++..+.. .+++|++|++++| .+++.+ ...++
T Consensus 10 ~~~~~~~~~L~~L~L~~~-------------------~~i~~~~~~~l~~al~~n~~L~~L~Ls~n-~l~~~~--~~~L~ 67 (166)
T d1io0a_ 10 KRIQNNDPDLEEVNLNNI-------------------MNIPVPTLKACAEALKTNTYVKKFSIVGT-RSNDPV--AFALA 67 (166)
T ss_dssp HHHHTTCTTCCEEECTTC-------------------TTCCHHHHHHHHHHHTTCCSCCEEECTTS-CCCHHH--HHHHH
T ss_pred HHHHhcCCCCcEEEcCCC-------------------CCCCHHHHHHHHHHHhcCCccCeeeccCC-cccHHH--HHHHH
Confidence 455567899999999764 5678888776654 6789999999996 587766 44554
Q ss_pred hcCCCCcEeecccccCcccEEEecCCCCCCHHHHHHHHhc---CCCCcEEEecCCC-CCCHHHHHHHHH---HhcCCccE
Q 039096 221 SKCVNLKGLKLGQLHSWLESLSIKNCGDLSDMSLVAIGRG---CSKLVKFEVEGCK-NITVDGLRTLAS---LLRETLVV 293 (554)
Q Consensus 221 ~~~~~L~~L~l~~~~~~L~~L~l~~~~~l~~~~l~~l~~~---~~~L~~L~L~~c~-~i~~~~~~~l~~---~~~~~L~~ 293 (554)
..+...+ +++.+++++|. +++.+...++.. .++|+.++|..+. .+++.|...++. .. ++|++
T Consensus 68 ~~l~~~~---------~l~~l~l~~~~-~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n-~~L~~ 136 (166)
T d1io0a_ 68 EMLKVNN---------TLKSLNVESNF-ISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKN-TTLLK 136 (166)
T ss_dssp HHHHHCS---------SCCEEECCSSC-CCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHC-SSCCE
T ss_pred HHHhhcc---------cchhhhhcccc-ccchhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhC-CCcCE
Confidence 3222111 45577788887 899888777653 5889988886443 389988777765 44 89999
Q ss_pred EEEeccC
Q 039096 294 IKIYCCE 300 (554)
Q Consensus 294 L~l~~c~ 300 (554)
|++....
T Consensus 137 L~l~~~~ 143 (166)
T d1io0a_ 137 FGYHFTQ 143 (166)
T ss_dssp EECCCSS
T ss_pred EeCcCCC
Confidence 9997653
No 29
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.24 E-value=6.8e-09 Score=95.49 Aligned_cols=18 Identities=28% Similarity=0.479 Sum_probs=10.5
Q ss_pred CCCCCcEEEecCCCCCCC
Q 039096 194 GLPLLEELALDVGKNVRD 211 (554)
Q Consensus 194 ~~~~L~~L~L~~c~~l~~ 211 (554)
+++.++++.+..++++..
T Consensus 76 ~l~~l~~l~~~~~n~l~~ 93 (242)
T d1xwdc1 76 NLPKLHEIRIEKANNLLY 93 (242)
T ss_dssp SCTTCCEEEEECCTTCCE
T ss_pred cccccccccccccccccc
Confidence 456666666665555533
No 30
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.19 E-value=1.4e-06 Score=70.37 Aligned_cols=104 Identities=24% Similarity=0.331 Sum_probs=57.5
Q ss_pred cCCCCcEEEecCCCCCCCChhHHHhhcCcCCCCccEEEcCCCCCCCCCCHHHHHHHHHhCCChHhhHHHHhccCCCCCEE
Q 039096 77 HCKCLTSVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSFSEDYRPQEIIEIIAARPNLNKWAVSIATNCPRLTLL 156 (554)
Q Consensus 77 ~~~~L~~L~L~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~i~~~~l~~l~~~~~~L~~L~~~~~~~~~~L~~L 156 (554)
.+++|++|++++|. +. .+|..+..+ ++|+.|++++|.. + .+. . ...+++|++|
T Consensus 18 ~l~~L~~L~ls~N~-l~-~lp~~~~~l----~~L~~L~l~~N~i----~------------~l~----~-~~~l~~L~~L 70 (124)
T d1dcea3 18 QLLLVTHLDLSHNR-LR-ALPPALAAL----RCLEVLQASDNAL----E------------NVD----G-VANLPRLQEL 70 (124)
T ss_dssp GGTTCCEEECCSSC-CC-CCCGGGGGC----TTCCEEECCSSCC----C------------CCG----G-GTTCSSCCEE
T ss_pred cCCCCCEEECCCCc-cC-cchhhhhhh----hcccccccccccc----c------------ccC----c-cccccccCeE
Confidence 56778888887763 33 345445544 5788888887762 1 111 1 1256778888
Q ss_pred EecccccccccCCCCCCCCCccccCCCCHH-HHHHHHhCCCCCcEEEecCCCCCCCchhhHHHHHhcCCCCcEe
Q 039096 157 HLAETSTLAAMRGDPDDDGFTAEDARISEE-GLIQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGL 229 (554)
Q Consensus 157 ~l~~c~~l~~~~~~~~~~g~~~~~~~i~~~-~l~~l~~~~~~L~~L~L~~c~~l~~~~~~l~~l~~~~~~L~~L 229 (554)
+++++ .+++. .+.. ...+++|+.|++++ +.+++.......+...+|+|+.|
T Consensus 71 ~l~~N--------------------~i~~~~~~~~-l~~~~~L~~L~l~~-N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 71 LLCNN--------------------RLQQSAAIQP-LVSCPRLVLLNLQG-NSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp ECCSS--------------------CCCSSSTTGG-GGGCTTCCEEECTT-SGGGGSSSCTTHHHHHCTTCSEE
T ss_pred ECCCC--------------------ccCCCCCchh-hcCCCCCCEEECCC-CcCCcCccHHHHHHHHCcCcceE
Confidence 88664 22211 1112 24677888888876 33543221122344567777654
No 31
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.16 E-value=4.3e-07 Score=77.35 Aligned_cols=110 Identities=11% Similarity=0.003 Sum_probs=74.6
Q ss_pred CCccEEEEeccCCCChhHHHHHHhhcCCCccEEEeeeeeccccchhhhccCCccchhhhhcCCCCceEEeecccCCccCc
Q 039096 289 ETLVVIKIYCCENLGAVASCKALKPIRDRIQKLHIDCVWDGIRSSEAKATGNTSTIFSKTRWKSLKELSFWIEVGELLTP 368 (554)
Q Consensus 289 ~~L~~L~l~~c~~~~~~~~l~~l~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~~~~t~ 368 (554)
.++++|+++++... .. ..+...+++|+.|+++.+.+..- ..+ ..+++|++|++++|. ++.
T Consensus 18 ~~lr~L~L~~n~I~-~i---~~~~~~l~~L~~L~Ls~N~i~~l--~~~-----------~~l~~L~~L~ls~N~---i~~ 77 (162)
T d1a9na_ 18 VRDRELDLRGYKIP-VI---ENLGATLDQFDAIDFSDNEIRKL--DGF-----------PLLRRLKTLLVNNNR---ICR 77 (162)
T ss_dssp TSCEEEECTTSCCC-SC---CCGGGGTTCCSEEECCSSCCCEE--CCC-----------CCCSSCCEEECCSSC---CCE
T ss_pred CcCcEEECCCCCCC-cc---CccccccccCCEEECCCCCCCcc--CCc-----------ccCcchhhhhccccc---ccC
Confidence 35666666665422 21 12334567788888877764422 334 678999999998776 777
Q ss_pred cccccCcCCCCCCEEEEeeeCCCCCCCCCCccccchhhhhccCCCccceeeecCCcccc
Q 039096 369 LPVAGLDECPILENIRIKMEGDTREKPLLRDDKAWGLSCLTRYPRLSKLVLDFGDTDGH 427 (554)
Q Consensus 369 l~~~~l~~~~~L~~L~l~~~~~c~~~~~l~~~~~~~l~~l~~~~~L~~L~l~c~~~~~~ 427 (554)
++...+..+++|+.|+++ +| .+.+ -..+..+..+++|+.|+++.|.++..
T Consensus 78 l~~~~~~~l~~L~~L~L~---~N----~i~~--~~~l~~l~~l~~L~~L~l~~N~i~~~ 127 (162)
T d1a9na_ 78 IGEGLDQALPDLTELILT---NN----SLVE--LGDLDPLASLKSLTYLCILRNPVTNK 127 (162)
T ss_dssp ECSCHHHHCTTCCEEECC---SC----CCCC--GGGGGGGGGCTTCCEEECCSSGGGGS
T ss_pred CCccccccccccccceec---cc----cccc--cccccccccccccchhhcCCCccccc
Confidence 766545789999999998 55 3431 12345677899999999996666554
No 32
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=98.13 E-value=7.7e-06 Score=69.70 Aligned_cols=13 Identities=8% Similarity=0.130 Sum_probs=7.2
Q ss_pred CCCCcEEEecCCC
Q 039096 261 CSKLVKFEVEGCK 273 (554)
Q Consensus 261 ~~~L~~L~L~~c~ 273 (554)
.+.|+.|+++.+.
T Consensus 130 n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 130 NESLLRVGISFAS 142 (167)
T ss_dssp CSSCCEEECCCCC
T ss_pred CCCccEeeCcCCC
Confidence 5555666555543
No 33
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.04 E-value=3.9e-07 Score=80.47 Aligned_cols=32 Identities=16% Similarity=0.238 Sum_probs=16.5
Q ss_pred EEEecCCCCCCHHH-HHHHHhcCCCCcEEEecCCC
Q 039096 240 SLSIKNCGDLSDMS-LVAIGRGCSKLVKFEVEGCK 273 (554)
Q Consensus 240 ~L~l~~~~~l~~~~-l~~l~~~~~~L~~L~L~~c~ 273 (554)
.|++++|. +++.. +..+ ..+++|+.|++++|+
T Consensus 119 ~L~L~~N~-i~~~~~~~~l-~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 119 VLYMSNNK-ITNWGEIDKL-AALDKLEDLLLAGNP 151 (198)
T ss_dssp EEEESEEE-CCCHHHHHHH-TTTTTCSEEEECSSH
T ss_pred ccccccch-hccccccccc-cCCCccceeecCCCc
Confidence 45555554 44432 2223 336667777777665
No 34
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.03 E-value=3.5e-07 Score=83.59 Aligned_cols=35 Identities=20% Similarity=0.140 Sum_probs=22.6
Q ss_pred CCCcEEEecCCCCCCCchhhHHHHHhcCCCCcEeecccc
Q 039096 196 PLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQL 234 (554)
Q Consensus 196 ~~L~~L~L~~c~~l~~~~~~l~~l~~~~~~L~~L~l~~~ 234 (554)
+++++|+++++ .++.... .++ .++++|++|+++++
T Consensus 29 ~~l~~L~Ls~n-~i~~l~~--~~f-~~l~~L~~L~ls~n 63 (242)
T d1xwdc1 29 RNAIELRFVLT-KLRVIQK--GAF-SGFGDLEKIEISQN 63 (242)
T ss_dssp SCCSEEEEESC-CCCEECT--TTT-TTCTTCCEEEEESC
T ss_pred CCCCEEECcCC-cCCccCh--hHh-hccchhhhhhhccc
Confidence 47999999884 5754332 134 66787776666543
No 35
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.03 E-value=2.6e-06 Score=68.76 Aligned_cols=101 Identities=19% Similarity=0.017 Sum_probs=67.3
Q ss_pred eEEEEecCC-CchhchhhcCCCCcEEeccCCcccccccccCCCccCCCcccceeecccccccCcccHHHHHhcCCCCcEE
Q 039096 6 TSITLRGNA-CNLNIVPLCFDAVTNLQLSNISPWGHSLLFSPSSSSMDPRLLADLLQMSFLCFGAEFVPLLKHCKCLTSV 84 (554)
Q Consensus 6 ~~L~l~~~~-~~l~~l~~~~~~L~~L~Ls~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~l~~~~~~~~~L~~L 84 (554)
|.|+++++. ..+..+ ..+++|++|+++++ .+. ... +.+. .+++|+.+++++..- . .+ +-+..+++|++|
T Consensus 1 R~L~Ls~n~l~~l~~l-~~l~~L~~L~ls~N-~l~-~lp--~~~~-~l~~L~~L~l~~N~i-~--~l-~~~~~l~~L~~L 70 (124)
T d1dcea3 1 RVLHLAHKDLTVLCHL-EQLLLVTHLDLSHN-RLR-ALP--PALA-ALRCLEVLQASDNAL-E--NV-DGVANLPRLQEL 70 (124)
T ss_dssp SEEECTTSCCSSCCCG-GGGTTCCEEECCSS-CCC-CCC--GGGG-GCTTCCEEECCSSCC-C--CC-GGGTTCSSCCEE
T ss_pred CEEEcCCCCCCCCccc-ccCCCCCEEECCCC-ccC-cch--hhhh-hhhcccccccccccc-c--cc-CccccccccCeE
Confidence 578888874 233332 47899999999998 453 222 3454 899999999995431 1 11 126789999999
Q ss_pred EecCCCCCCCChhHHHhhcCcCCCCccEEEcCCCCC
Q 039096 85 DLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSF 120 (554)
Q Consensus 85 ~L~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~ 120 (554)
++++|....-.....+..+ ++|++|++++|..
T Consensus 71 ~l~~N~i~~~~~~~~l~~~----~~L~~L~l~~N~i 102 (124)
T d1dcea3 71 LLCNNRLQQSAAIQPLVSC----PRLVLLNLQGNSL 102 (124)
T ss_dssp ECCSSCCCSSSTTGGGGGC----TTCCEEECTTSGG
T ss_pred ECCCCccCCCCCchhhcCC----CCCCEEECCCCcC
Confidence 9998843222212234444 6999999999873
No 36
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=97.82 E-value=5.7e-07 Score=79.35 Aligned_cols=13 Identities=8% Similarity=-0.041 Sum_probs=7.1
Q ss_pred CCCCcEEEecCCC
Q 039096 261 CSKLVKFEVEGCK 273 (554)
Q Consensus 261 ~~~L~~L~L~~c~ 273 (554)
+++|+.|++++|.
T Consensus 69 l~~L~~L~Ls~N~ 81 (198)
T d1m9la_ 69 MENLRILSLGRNL 81 (198)
T ss_dssp HTTCCEEECCEEE
T ss_pred CccccChhhcccc
Confidence 4555555555554
No 37
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.69 E-value=1.7e-05 Score=69.22 Aligned_cols=36 Identities=8% Similarity=0.035 Sum_probs=19.3
Q ss_pred hcCCCCceEEeecccCCccCccccccCcCCCCCCEEEEe
Q 039096 348 TRWKSLKELSFWIEVGELLTPLPVAGLDECPILENIRIK 386 (554)
Q Consensus 348 ~~~~~L~~L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~ 386 (554)
..+++|++|+++++. ++.++...+.++++|++|+++
T Consensus 75 ~~~~~L~~L~Ls~N~---l~~l~~~~F~~l~~L~~L~L~ 110 (192)
T d1w8aa_ 75 EGASHIQELQLGENK---IKEISNKMFLGLHQLKTLNLY 110 (192)
T ss_dssp TTCTTCCEEECCSCC---CCEECSSSSTTCTTCCEEECC
T ss_pred ccccccceeeecccc---ccccCHHHHhCCCcccccccC
Confidence 445555555554443 455555445555555555554
No 38
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.50 E-value=7.5e-05 Score=64.93 Aligned_cols=92 Identities=12% Similarity=0.066 Sum_probs=69.4
Q ss_pred CCccEEEeeeeeccc-cchhhhccCCccchhhhhcCCCCceEEeecccCCccCccccccCcCCCCCCEEEEeeeCCCCCC
Q 039096 316 DRIQKLHIDCVWDGI-RSSEAKATGNTSTIFSKTRWKSLKELSFWIEVGELLTPLPVAGLDECPILENIRIKMEGDTREK 394 (554)
Q Consensus 316 ~~L~~L~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~~~~~c~~~ 394 (554)
+++++|+|+.+.++. .....+ ..+++|++|+++++. ++.+....+..+++|++|+++ ++
T Consensus 29 ~~l~~L~Ls~N~i~~~~~~~~f-----------~~l~~L~~L~L~~N~---i~~~~~~~~~~~~~L~~L~Ls---~N--- 88 (192)
T d1w8aa_ 29 LHTTELLLNDNELGRISSDGLF-----------GRLPHLVKLELKRNQ---LTGIEPNAFEGASHIQELQLG---EN--- 88 (192)
T ss_dssp TTCSEEECCSCCCCSBCCSCSG-----------GGCTTCCEEECCSSC---CCCBCTTTTTTCTTCCEEECC---SC---
T ss_pred CCCCEEEeCCCCCccccccccc-----------CCCceEeeeeccccc---cccccccccccccccceeeec---cc---
Confidence 568899998887643 334444 789999999998665 777777778899999999998 54
Q ss_pred CCCCccccchhhhhccCCCccceeeecCCcccccccc
Q 039096 395 PLLRDDKAWGLSCLTRYPRLSKLVLDFGDTDGHNQAA 431 (554)
Q Consensus 395 ~~l~~~~~~~l~~l~~~~~L~~L~l~c~~~~~~~~~~ 431 (554)
++. ......|..+++|+.|+|+.|.++.....+
T Consensus 89 -~l~---~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~ 121 (192)
T d1w8aa_ 89 -KIK---EISNKMFLGLHQLKTLNLYDNQISCVMPGS 121 (192)
T ss_dssp -CCC---EECSSSSTTCTTCCEEECCSSCCCEECTTS
T ss_pred -ccc---ccCHHHHhCCCcccccccCCccccccCHHH
Confidence 444 222235677999999999999898766544
No 39
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.32 E-value=0.0037 Score=51.65 Aligned_cols=36 Identities=14% Similarity=0.166 Sum_probs=19.8
Q ss_pred hcCCCCceEEeecccCCccCccccccCcCCCCCCEEEEe
Q 039096 348 TRWKSLKELSFWIEVGELLTPLPVAGLDECPILENIRIK 386 (554)
Q Consensus 348 ~~~~~L~~L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~ 386 (554)
.++++|+.|+++++. ++.+....+..+++|++|+++
T Consensus 53 ~~l~~L~~L~Ls~N~---l~~i~~~~f~~l~~L~~L~Ls 88 (156)
T d2ifga3 53 RGLGELRNLTIVKSG---LRFVAPDAFHFTPRLSRLNLS 88 (156)
T ss_dssp CSCCCCSEEECCSSC---CCEECTTGGGSCSCCCEEECC
T ss_pred ccccccCcceeeccc---cCCcccccccccccccceecc
Confidence 445566666665443 555555545555666666665
No 40
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.19 E-value=0.0012 Score=55.24 Aligned_cols=69 Identities=19% Similarity=0.152 Sum_probs=41.1
Q ss_pred HHHHhCCCCCcEEEecCCCCCCCchhhHHHHHhcCCCCcEeecccccCcccEEEecCCCCCCHHHHHHHHhcCCCCcEEE
Q 039096 189 IQLFSGLPLLEELALDVGKNVRDSGSASEALKSKCVNLKGLKLGQLHSWLESLSIKNCGDLSDMSLVAIGRGCSKLVKFE 268 (554)
Q Consensus 189 ~~l~~~~~~L~~L~L~~c~~l~~~~~~l~~l~~~~~~L~~L~l~~~~~~L~~L~l~~~~~l~~~~l~~l~~~~~~L~~L~ 268 (554)
..+...+++|++|+|+++ ++++... +......+++|+.| ++++|. +++........ ..+|++|+
T Consensus 58 ~~~~~~~~~L~~L~Ls~N-~i~~l~~-~~~~~~~l~~L~~L------------~Ls~N~-i~~l~~l~~l~-~~~L~~L~ 121 (162)
T d1koha1 58 RIIEENIPELLSLNLSNN-RLYRLDD-MSSIVQKAPNLKIL------------NLSGNE-LKSERELDKIK-GLKLEELW 121 (162)
T ss_dssp HHHHHHCTTCCCCCCCSS-CCCCCSG-GGTHHHHSTTCCCC------------CCTTSC-CCCGGGHHHHT-TCCCSSCC
T ss_pred HHHHHhCCCCCEeeCCCc-cccCCch-hHHHHhhCCccccc------------ccccCc-cccchhhhhhh-ccccceee
Confidence 344457889999999884 5766432 22223667777754 444554 44432223333 45688888
Q ss_pred ecCCC
Q 039096 269 VEGCK 273 (554)
Q Consensus 269 L~~c~ 273 (554)
+.+|+
T Consensus 122 L~~Np 126 (162)
T d1koha1 122 LDGNS 126 (162)
T ss_dssp CTTST
T ss_pred cCCCC
Confidence 88877
No 41
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.10 E-value=0.006 Score=50.32 Aligned_cols=69 Identities=26% Similarity=0.246 Sum_probs=53.8
Q ss_pred hcCCCCceEEeecccCCccCccccccCcCCCCCCEEEEeeeCCCCCCCCCCccccchhhhhccCCCccceeeecCCcccc
Q 039096 348 TRWKSLKELSFWIEVGELLTPLPVAGLDECPILENIRIKMEGDTREKPLLRDDKAWGLSCLTRYPRLSKLVLDFGDTDGH 427 (554)
Q Consensus 348 ~~~~~L~~L~l~~c~~~~~t~l~~~~l~~~~~L~~L~l~~~~~c~~~~~l~~~~~~~l~~l~~~~~L~~L~l~c~~~~~~ 427 (554)
..+++|++|++.+... ++.+....+.++++|+.|+++ ++ .++ ......|..+++|+.|+|+.|+++..
T Consensus 28 ~~l~~l~~L~l~~n~~--l~~i~~~~f~~l~~L~~L~Ls---~N----~l~---~i~~~~f~~l~~L~~L~Ls~N~l~~l 95 (156)
T d2ifga3 28 PGAENLTELYIENQQH--LQHLELRDLRGLGELRNLTIV---KS----GLR---FVAPDAFHFTPRLSRLNLSFNALESL 95 (156)
T ss_dssp CSCSCCSEEECCSCSS--CCEECGGGSCSCCCCSEEECC---SS----CCC---EECTTGGGSCSCCCEEECCSSCCSCC
T ss_pred cCccccCeeecCCCcc--ccccCchhhccccccCcceee---cc----ccC---CcccccccccccccceeccCCCCccc
Confidence 5678999999975544 778888888999999999998 55 444 33334677799999999998888754
Q ss_pred c
Q 039096 428 N 428 (554)
Q Consensus 428 ~ 428 (554)
.
T Consensus 96 ~ 96 (156)
T d2ifga3 96 S 96 (156)
T ss_dssp C
T ss_pred C
Confidence 4
No 42
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.00 E-value=0.0017 Score=54.16 Aligned_cols=46 Identities=22% Similarity=0.141 Sum_probs=27.9
Q ss_pred HHHHHhcCCCCcEEEecCCCCCCCChhHHHhhcCcCCCCccEEEcCCCCCC
Q 039096 71 FVPLLKHCKCLTSVDLSSFYHWTEDLPPVLKAYPDKSAILTCLNLLKTSFS 121 (554)
Q Consensus 71 l~~~~~~~~~L~~L~L~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~ 121 (554)
+...+..+++|+.|++++|. +.+ ++. +..+ ...+|+.|++.+|..+
T Consensus 83 ~~~~~~~l~~L~~L~Ls~N~-i~~-l~~-l~~l--~~~~L~~L~L~~Npl~ 128 (162)
T d1koha1 83 MSSIVQKAPNLKILNLSGNE-LKS-ERE-LDKI--KGLKLEELWLDGNSLS 128 (162)
T ss_dssp GGTHHHHSTTCCCCCCTTSC-CCC-GGG-HHHH--TTCCCSSCCCTTSTTS
T ss_pred hHHHHhhCCcccccccccCc-ccc-chh-hhhh--hccccceeecCCCCcC
Confidence 33445678888899988873 333 222 2222 1236888888888744
Done!